LOCUS       DAJVUK010000001       107626 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.001, whole genome shotgun sequence.
ACCESSION   DAJVUK010000001 DAJVUK010000000
VERSION     DAJVUK010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 107626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 107626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107626
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.001"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..610)
                     /gene="yeeE"
                     /locus_tag="OQQ57_000001"
                     /pseudo
     CDS             complement(1..610)
                     /gene="yeeE"
                     /locus_tag="OQQ57_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416517.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
     gene            complement(789..2147)
                     /gene="plaP"
                     /locus_tag="OQQ57_000002"
     CDS             complement(789..2147)
                     /gene="plaP"
                     /locus_tag="OQQ57_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HCS1954907.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(2137..2199)
                     /gene="yoeI"
                     /locus_tag="OQQ57_000003"
     CDS             complement(2137..2199)
                     /gene="yoeI"
                     /locus_tag="OQQ57_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HCS1954908.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            complement(2414..3343)
                     /locus_tag="OQQ57_000004"
     CDS             complement(2414..3343)
                     /locus_tag="OQQ57_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1954909.1"
                     /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQHFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            complement(3389..4213)
                     /locus_tag="OQQ57_000005"
     CDS             complement(3389..4213)
                     /locus_tag="OQQ57_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1954910.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
                     IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGSGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGMVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            complement(4296..4550)
                     /gene="yoeB"
                     /locus_tag="OQQ57_000006"
                     /pseudo
     CDS             complement(4296..4550)
                     /gene="yoeB"
                     /locus_tag="OQQ57_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707909.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YoeB"
     gene            complement(4547..4798)
                     /gene="yefM"
                     /locus_tag="OQQ57_000007"
     CDS             complement(4547..4798)
                     /gene="yefM"
                     /locus_tag="OQQ57_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoeB-YefM toxin-antitoxin system antitoxin YefM"
                     /protein_id="HCS1954911.1"
                     /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
                     YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE"
     gene            5081..5131
                     /gene="hisL"
                     /locus_tag="OQQ57_000008"
     CDS             5081..5131
                     /gene="hisL"
                     /locus_tag="OQQ57_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HCS1954912.1"
                     /translation="MTRVQFKHHHHHHHPD"
     misc_feature    5107..5230
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            5277..6176
                     /gene="hisG"
                     /locus_tag="OQQ57_000009"
     CDS             5277..6176
                     /gene="hisG"
                     /locus_tag="OQQ57_000009"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HCS1954913.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     gene            6182..7486
                     /gene="hisD"
                     /locus_tag="OQQ57_000010"
     CDS             6182..7486
                     /gene="hisD"
                     /locus_tag="OQQ57_000010"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HCS1954914.1"
                     /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     ARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAAD
                     MARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
                     ARDLVDGITSAGSVFLGDWSLESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA"
     gene            7483..8553
                     /gene="hisC"
                     /locus_tag="OQQ57_000011"
     CDS             7483..8553
                     /gene="hisC"
                     /locus_tag="OQQ57_000011"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HCS1954915.1"
                     /translation="MSIVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
                     ILYCPPTYGMYGVSAETIGVECRTVPTLDNWQLDLQGISDKLEGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER
                     ECLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKHPSLSGCL
                     RITVGTREESQRVIDALRAEQV"
     gene            8553..9620
                     /gene="hisB"
                     /locus_tag="OQQ57_000012"
     CDS             8553..9620
                     /gene="hisB"
                     /locus_tag="OQQ57_000012"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HCS1954916.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQSFLQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            9620..10210
                     /gene="hisH"
                     /locus_tag="OQQ57_000013"
     CDS             9620..10210
                     /gene="hisH"
                     /locus_tag="OQQ57_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HCS1954917.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            10210..10947
                     /gene="hisA"
                     /locus_tag="OQQ57_000014"
     CDS             10210..10947
                     /gene="hisA"
                     /locus_tag="OQQ57_000014"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HCS1954918.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            10929..11705
                     /gene="hisF"
                     /locus_tag="OQQ57_000015"
     CDS             10929..11705
                     /gene="hisF"
                     /locus_tag="OQQ57_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HCS1954919.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDGETGKYHVNQYTGDESRTRVTQWETL
                     DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            11699..12310
                     /locus_tag="OQQ57_000016"
     CDS             11699..12310
                     /locus_tag="OQQ57_000016"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HCS1954920.1"
                     /translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
                     TIESGKVTFFSRTKQRLWTKGETSGNFLNVVNIAPDCDNDTLLVLANPIGPTCHKGTS
                     SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ"
     gene            complement(12407..13384)
                     /gene="wzzB"
                     /locus_tag="OQQ57_000017"
     CDS             complement(12407..13384)
                     /gene="wzzB"
                     /locus_tag="OQQ57_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HCS1954921.1"
                     /translation="MRVENNNVSGQNHDPEQIDLIDFLVQLWRGKMTIIISVIVAIAL
                     AIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGPAVPKVSDIQTSLIGRYSTA
                     FSALAETLDNQEEPEKLTIEPTVKNQSLPLAVSYVGETAEGAQKQLAQYIQQVDDQVN
                     EELEKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQ
                     QTEDVTQDTLFLLGSEALESMIKHEATRPLVFSSNYYQTRQNLLDIESLKVDDLDIHA
                     YRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            complement(13531..13623)
                     /locus_tag="OQQ57_000018"
                     /pseudo
     CDS             complement(13531..13623)
                     /locus_tag="OQQ57_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356562.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
     gene            13793..14797
                     /locus_tag="OQQ57_000019"
     CDS             13793..14797
                     /locus_tag="OQQ57_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010432020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HCS1954922.1"
                     /translation="MKFLVTGAAGFIGFYVSKRLLAAGHQVVGIDNLNDYYDVNLKQA
                     RLDLLKHDNFSFYKIDLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADAN
                     LIGFLNILEGCRHNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANEL
                     MAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFT
                     YIDDIAEAIIRLQDVIPEKDPQWTVETGSPATSSAPYRVYNIGNSSPVELMDYINALE
                     EALGIEANKNMMPLQPGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWYRNFYKV
                     "
     gene            complement(14863..16029)
                     /gene="ugd"
                     /locus_tag="OQQ57_000020"
     CDS             complement(14863..16029)
                     /gene="ugd"
                     /locus_tag="OQQ57_000020"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HCS1954923.1"
                     /translation="MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSP
                     IVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIATPTDYDPKTNYFNTSSVEAVIR
                     DVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
                     GEQSDRAERFAALLQEGAIKQDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADSILARKPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGVPVIV
                     YEPAMKEDDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND"
     gene            complement(16278..17684)
                     /gene="gndA"
                     /locus_tag="OQQ57_000021"
     CDS             complement(16278..17684)
                     /gene="gndA"
                     /locus_tag="OQQ57_000021"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HCS1954924.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA
                     AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGNKAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKDGVFHTEWLD"
     gene            complement(17753..18859)
                     /gene="glf"
                     /locus_tag="OQQ57_000022"
     CDS             complement(17753..18859)
                     /gene="glf"
                     /locus_tag="OQQ57_000022"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HCS1954925.1"
                     /translation="MQYEFIIIGSGLFGAVCAYELNKRNKRVLVIEKRDHIGGNIYTE
                     KVDDIHIHKYGAHIFHTNDQYIWNYINKFASFNRFTNSPLAYHKGKLYNLPFNMNTFY
                     QLWGTKTPSEAQDKIDLQRSKYSNITPTNLEEQALSLVGEDVYEKLIKGYTEKQWGRS
                     CSELPPFIIKRIPVRFTFDNNYFTDRFQGVPIGGYTQIIDKMLNGVDLLLNVDYLSEK
                     DKYNSMAERIIYTGPIDAYFDKKLGTLEYRSLKFITKKIEEANYQGNAVINYTEKDIP
                     FTRIIEHKHFDDSYETEYTFITEEYPIEWSEGQEPYYPINDKKNMDIYHKYRELSQME
                     SKVIFGGRLAEYKYYDMHQVIRSALNCVNKILHD"
     gene            complement(18892..19422)
                     /gene="rfbC"
                     /locus_tag="OQQ57_000023"
     CDS             complement(18892..19422)
                     /gene="rfbC"
                     /locus_tag="OQQ57_000023"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011093025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HCS1954926.1"
                     /translation="MKVQDTVLDGVKIIEPVVYGDNRGFFLEVYQKQRYQNLLNIEFD
                     FVQDNYSRSSKNVLRGLHFQKTKPQGKLVRVVRGEVFDVAVDIRKESPNYGQWIGVLL
                     SEMNKKQFWVPPGFAHGFVVLSEMADFEYKCTEYYDPEDECCLLWNDPELNIQWPLSN
                     PILSDKDMKGCLLKEL"
     gene            complement(19437..20606)
                     /locus_tag="OQQ57_000024"
     CDS             complement(19437..20606)
                     /locus_tag="OQQ57_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCS1954927.1"
                     /translation="MDCLDEKDHLRDNHSLKIVLTANSSWYIYNFRRSTIKALINIGF
                     DVLVVVPDYEYKDSILKFGAKFEKVDLKPKSINIFTECTSLISYYKIIKKFNPQVILT
                     FTPKANIYCGLLAYKFDAKVIPNISGLGSAFVNSNTILSQIVKLLYKIALKKAAFVFF
                     QNEDDRQLLINSGCVNYEKTCRIFGSGVDLSKFLPSNKNLKQRSCVKFILVARLLYTK
                     GILHYLKAAEIIKSKYPNCSFSLLGAFEKNEKIITKELIEGFCTRGIVNYYGTSDDVA
                     SIMKHYDAIVLPSFYREGVPKALIEGASSGLAILTTDNVGCRDMVQNEVNGFLCQPND
                     LDSLVDIIEKYILLTDEMKNTMSIKSREFAESHCDENKIIEKYTNTINDVLNRNH"
     gene            complement(20569..21441)
                     /locus_tag="OQQ57_000025"
     CDS             complement(20569..21441)
                     /locus_tag="OQQ57_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCS1954928.1"
                     /translation="MNRVAVIIVLYYPDVSKINKMIDSLGKKQCEILLVDNTPELHLE
                     SDVLCNNNIHYYHLGDNKGIAFAQNYGFIKAIGLGKSLFFTFDQDSCISKDYISSMLK
                     EYEYACSLRSNIAALGPTIINERNGKKYDREIKLGSQISETIHDVESIISSGALIPLE
                     AIINIGLNKVSWFIDLIDIEWSFRARKEGWNILVTDKVLISHNIGSKDINIMGIKTFT
                     VCSPFRLYYVYRNWLLALREPVFPLRYKLKKLITMPVRIIIYAFCERGGQRLNYIFKG
                     IKDGLLGRKGSFKG"
     gene            complement(22244..22876)
                     /locus_tag="OQQ57_000026"
     CDS             complement(22244..22876)
                     /locus_tag="OQQ57_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HCS1954929.1"
                     /translation="MLEHIVVFDVCGTLYLSNTTFDYVVFVHRKQKKYTKLIKCLLLR
                     SLFGKLLHKLRICSLRKHFLKTLEGYEKSTLEELANLFYDEFLIFKEKNEVMALLERY
                     KHEKIILMSASVDPVINVIAKNLNVEAVSSKLEFIDNKSTGLLEYNLTGIKHLQVNNP
                     VSLIVTDNFSDINLIKLADTAVIISKAKDKNKWRVLLNRFGVSKDKVRFM"
     gene            complement(22878..24059)
                     /locus_tag="OQQ57_000027"
     CDS             complement(22878..24059)
                     /locus_tag="OQQ57_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001564252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide repeat unit polymerase"
                     /protein_id="HCS1954930.1"
                     /translation="MTIFIAIIMLMYSGLLLSINKDIKSPSAILFFIWGGLLFLSGVN
                     GDITNYTLCIILFSCLSFSVGALLAKPYAPIFEHVFSYNINNTKALVLITNIISFVIL
                     IYTLIVFLYYYKGGFTESYINSRTEINYGDKSGLIKIYGYIYYLLYPLVYVWSFLYFK
                     NKYKKIEEGERARLPYNNRTFYFVFFTSLFYALLSTAKIKVLLLIIPIVFLRLFFSKI
                     SLKYLLVTVSGIIFFFYLSMLFLNKIDDSSGAFEALKYGLMNYSLANIFALDSVLQGK
                     AVVIDCNGDATCGLANFISYKEYKTNVFTIFYSLTKYSDFLYSLIFFFVIGFFHSSLY
                     NVAKKNKKTISVVICSILYFPLLFQFFDQLYMLMFYIYAIAMLYVICFCSRLTLTLKG
                     V"
     gene            complement(24062..24826)
                     /locus_tag="OQQ57_000028"
     CDS             complement(24062..24826)
                     /locus_tag="OQQ57_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4422 domain-containing protein"
                     /protein_id="HCS1954931.1"
                     /translation="MALFIACHKQTELPNHECYIPIHAGKKISGKMLDQVLGDDTGNN
                     ISCKNKNYCELTVIYWLWKNKLFNDDYIGLVHYRRYFGNVLSNFKFKEVRIYDRANIS
                     NKMKQYDIIIPVKESLKLSVVEHYRKFHNVEDLMLAKKIVDKLYPDYSVAFRELLEQK
                     KISLYNMFIMKAGIFDCYCDWLFSILDELEKEINLCRYDEYQSRVFGFIAERLLNVWI
                     NKNKEVFKVGEEFVINTDECSGRGAQLISQLRAKLK"
     gene            complement(24839..26086)
                     /locus_tag="OQQ57_000029"
     CDS             complement(24839..26086)
                     /locus_tag="OQQ57_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_050009647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HCS1954932.1"
                     /translation="MKLVTSLNKNIFYLAILQGSYFILPLLTFPYLVRVLGPYSFGLL
                     GFCQATMQYLVMVTDYGFNWSATQDVSKSKNDKEKLTTIFWNVFFSKIILALSAIVIF
                     FGITFFIKELYYAQVVLISFIPMVLGNILYPVWFFQGLEKMKWITLCSLSARLLLIPL
                     TFLLVKNPQDIWLAALIQGGVNFIAGLIGFAIIINNNWIGKLVFDYDGIIYSLKSGWH
                     IFISTAAISLYTTTTVVVLGFICGPVSVGYFNAANTIRNAAQSLMNPIYQAVYPRINS
                     LFEENYAKSMNLLKKSFKGVLFISFSGSLLLCILSPIIIRYGVGDKYTESISILRILA
                     FLPFIISLSNFFGIQTMLTHGYKRQFSKILLICGVMHVIIIAPLIFFAGAYGAAMTVL
                     ITETVVASLMYLFLKRKKINLFK"
     gene            complement(26129..27013)
                     /gene="rfbA"
                     /locus_tag="OQQ57_000030"
     CDS             complement(26129..27013)
                     /gene="rfbA"
                     /locus_tag="OQQ57_000030"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000857538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HCS1954933.1"
                     /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
                     MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPTPDGLAQAFIIGEEFIGG
                     DDCALVLGDNIFYGHDLPKLMDTAVDKESGATVFAYHVNDPERYGVVEFDKNGTAISL
                     EEKPLQPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMM
                     GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAYRKGFIDSEQVKILAEPL
                     KKNAYGQYLLNIINNKIS"
     gene            complement(27071..27970)
                     /gene="rfbD"
                     /locus_tag="OQQ57_000031"
     CDS             complement(27071..27970)
                     /gene="rfbD"
                     /locus_tag="OQQ57_000031"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HCS1954934.1"
                     /translation="MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPE
                     GVAETVKKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHY
                     STDYVFPGTGEIPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGN
                     NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGMYHLVAS
                     GTTTWHDYAALVFEEARKAGIPLALNKLNAVPATAYPTPARRPHNSRLNTEKFQQNFA
                     LVLPDWQVGVKRMLNELFTTTAI"
     gene            complement(27970..29055)
                     /gene="rfbB"
                     /locus_tag="OQQ57_000032"
     CDS             complement(27970..29055)
                     /gene="rfbB"
                     /locus_tag="OQQ57_000032"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HCS1954935.1"
                     /translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA
                     DVSDSERYVFEHADICDAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIV
                     GTYVLLEAARNYWSALDGDKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTA
                     YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
                     KALPIYGKGDQIRDWLYVEDHARALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDL
                     LDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKISRELGWKPQETFESGIRKTVEWY
                     LANAKWVENVKSGAYQSWIEQNYEGRQ"
     gene            complement(29427..30320)
                     /gene="galF"
                     /locus_tag="OQQ57_000033"
     CDS             complement(29427..30320)
                     /gene="galF"
                     /locus_tag="OQQ57_000033"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HCS1954936.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRKGIEKLLSE"
     gene            complement(30495..31889)
                     /gene="wcaM"
                     /locus_tag="OQQ57_000034"
     CDS             complement(30495..31889)
                     /gene="wcaM"
                     /locus_tag="OQQ57_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HCS1954937.1"
                     /translation="MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGQTVVVPGGLVCDNINTGIFIPAGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGEEGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKQVMRNLTIDNLTV
                     SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCT
                     NGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIK
                     ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
                     RVNNIQLDNTHLAYKLRGIQISAGNAVSCVALTNIEMKRASLELHNKPQHLFMRNINV
                     MQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNERGQSSVDIDRINHHIV
                     NVEKINFRLPERGE"
     gene            complement(31900..33120)
                     /gene="wcaL"
                     /locus_tag="OQQ57_000035"
     CDS             complement(31900..33120)
                     /gene="wcaL"
                     /locus_tag="OQQ57_000035"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HCS1954938.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQN
                     THAAWTKYNLAARTRWLQDEPQGKVAKLRYRASQTLRGIHRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPFHADVFIAHFGPAGVTAAKLRELDVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISELWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELTTVVKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            complement(33117..34397)
                     /gene="wcaK"
                     /locus_tag="OQQ57_000036"
     CDS             complement(33117..34397)
                     /gene="wcaK"
                     /locus_tag="OQQ57_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HCS1954939.1"
                     /translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVENGVDTAWLVDHHIEDF
                     TASYAVQHWLDVAAQQKAVAITLRELAPFDKRLGTTQEAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
                     RLHSAIISMNFSTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPALNARLNEAVSRERQTGMRMVQSVLERIGEAK"
     gene            complement(34565..36043)
                     /gene="wzxC"
                     /locus_tag="OQQ57_000037"
     CDS             complement(34565..36043)
                     /gene="wzxC"
                     /locus_tag="OQQ57_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid undecaprenyl disphosphate flippase
                     WzxC"
                     /protein_id="HCS1954940.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDAI
                     GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCIVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIIAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
     gene            complement(36045..37439)
                     /gene="wcaJ"
                     /locus_tag="OQQ57_000038"
     CDS             complement(36045..37439)
                     /gene="wcaJ"
                     /locus_tag="OQQ57_000038"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HCS1954941.1"
                     /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSF
                     LYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFN
                     NDFDTQLKIWLAWYGLTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLM
                     ESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGA
                     RVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRA
                     EDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVME
                     NDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR
                     QLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIV
                     FLTVFKGFVNKAAY"
     gene            complement(37494..38864)
                     /gene="cpsG"
                     /locus_tag="OQQ57_000039"
                     /gene_synonym="manB"
     CDS             complement(37494..38864)
                     /gene="cpsG"
                     /locus_tag="OQQ57_000039"
                     /gene_synonym="manB"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis phosphomannomutase
                     CpsG"
                     /protein_id="HCS1954942.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALARGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF
                     GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTIDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
                     VEQHFSREALSVDRTDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTL
                     LTLLNE"
     gene            complement(39057..40493)
                     /gene="cpsB"
                     /locus_tag="OQQ57_000040"
     CDS             complement(39057..40493)
                     /gene="cpsB"
                     /locus_tag="OQQ57_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HCS1954943.1"
                     /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEQAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            complement(40496..41719)
                     /gene="wcaI"
                     /locus_tag="OQQ57_000041"
     CDS             complement(40496..41719)
                     /gene="wcaI"
                     /locus_tag="OQQ57_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
                     /protein_id="HCS1954944.1"
                     /translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY
                     PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQR
                     RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA
                     QLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADV
                     DALRNQLDLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLE
                     KMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
                     AVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTL
                     DKENVLRQFINDIRG"
     gene            complement(41716..42195)
                     /gene="gmm"
                     /locus_tag="OQQ57_000042"
                     /gene_synonym="nudD"
                     /gene_synonym="wcaH"
                     /gene_synonym="yefC"
     CDS             complement(41716..42195)
                     /gene="gmm"
                     /locus_tag="OQQ57_000042"
                     /gene_synonym="nudD"
                     /gene_synonym="wcaH"
                     /gene_synonym="yefC"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HCS1954945.1"
                     /translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGY
                     WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY
                     VVLGFRFRVAEEELLMPDEQHDDYRWLTPDALLASNDVHANSRAYFLAEKRAGVPGL"
     gene            complement(42195..43163)
                     /gene="fcl"
                     /locus_tag="OQQ57_000043"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
     CDS             complement(42195..43163)
                     /gene="fcl"
                     /locus_tag="OQQ57_000043"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /EC_number="1.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HCS1954946.1"
                     /translation="MSRQRIFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDS
                     RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
                     LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
                     VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
                     AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK
                     PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRGE"
     gene            complement(43166..44287)
                     /gene="gmd"
                     /locus_tag="OQQ57_000044"
     CDS             complement(43166..44287)
                     /gene="gmd"
                     /locus_tag="OQQ57_000044"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HCS1954947.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF
                     EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
     gene            complement(44314..44862)
                     /gene="wcaF"
                     /locus_tag="OQQ57_000045"
     CDS             complement(44314..44862)
                     /gene="wcaF"
                     /locus_tag="OQQ57_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaF"
                     /protein_id="HCS1954948.1"
                     /translation="MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRA
                     FLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQ
                     KSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKT
                     LPANVVCRGNPAVVIRERVETE"
     gene            complement(44878..45624)
                     /gene="wcaE"
                     /locus_tag="OQQ57_000046"
     CDS             complement(44878..45624)
                     /gene="wcaE"
                     /locus_tag="OQQ57_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaE"
                     /protein_id="HCS1954949.1"
                     /translation="MLLSIITVAFRNLEGIVKTHASLAHLAQAEDISFEWIVVDGGSN
                     DGTREYLENLNGIYNLRFVSEPDNGIYDAMNKGITMAQGKFALFLNSGDIFHQDAANF
                     VRKLKMQKDNMMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKW
                     RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQ
                     ILHVPGFWAELSWHLRQRTTSKTKALYNKV"
     gene            complement(45635..46852)
                     /gene="wcaD"
                     /locus_tag="OQQ57_000047"
     CDS             complement(45635..46852)
                     /gene="wcaD"
                     /locus_tag="OQQ57_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
                     /protein_id="HCS1954950.1"
                     /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL
                     LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR
                     FKTISPHNHRKILRFFYLVVGLVVALAVVEMAQIILTGGSSIMESISKYLIYSNSYVL
                     NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGV
                     MTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGS
                     SSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIY
                     FSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIV
                     CPFILRKALNITR"
     gene            complement(46827..48044)
                     /gene="wcaC"
                     /locus_tag="OQQ57_000048"
     CDS             complement(46827..48044)
                     /gene="wcaC"
                     /locus_tag="OQQ57_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HCS1954951.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK
                     ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
                     LHSYWLNLKSVVRFCEKVKNHKPDVTVVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
                     TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
                     NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT
                     FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSDAAREVLQKSGGKTVSEEDVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQ
                     QMLEEYVNFYQNL"
     gene            complement(48041..48529)
                     /gene="wcaB"
                     /locus_tag="OQQ57_000049"
     CDS             complement(48041..48529)
                     /gene="wcaB"
                     /locus_tag="OQQ57_000049"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HCS1954952.1"
                     /translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPL
                     LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG
                     ADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKV
                     IK"
     gene            complement(48532..49371)
                     /gene="wcaA"
                     /locus_tag="OQQ57_000050"
     CDS             complement(48532..49371)
                     /gene="wcaA"
                     /locus_tag="OQQ57_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HCS1954953.1"
                     /translation="MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCS
                     TSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNR
                     LSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV
                     FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP
                     KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI
                     RGR"
     gene            complement(49549..51711)
                     /gene="wzc"
                     /locus_tag="OQQ57_000051"
     CDS             complement(49549..51711)
                     /gene="wzc"
                     /locus_tag="OQQ57_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
                     /protein_id="HCS1954954.1"
                     /translation="MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITAVFALC
                     AVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGK
                     TVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDDK
                     NYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHARPGSEFTVTKYSTLGMINQLQNSL
                     TVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQL
                     PEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLY
                     TKVHPAYRTLLEKRQALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNK
                     EQELKITEASTVGDVRIVDPAITQPGVLKPKKELIILGAIILGLMLSIVGVLLRSLFN
                     RGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAMGNPTDLAIE
                     AIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR
                     KGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSER
                     FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSR
                     FEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK"
     gene            complement(51714..52157)
                     /gene="wzb"
                     /locus_tag="OQQ57_000052"
     CDS             complement(51714..52157)
                     /gene="wzb"
                     /locus_tag="OQQ57_000052"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HCS1954955.1"
                     /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG
                     ADPTAISIAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM
                     LFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV"
     gene            complement(52163..53302)
                     /gene="wza"
                     /locus_tag="OQQ57_000053"
     CDS             complement(52163..53302)
                     /gene="wza"
                     /locus_tag="OQQ57_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein Wza"
                     /protein_id="HCS1954956.1"
                     /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
                     VDVNIAAFRSQKTYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
                     GREERISLQVLMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
                     TLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF
                     RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
     gene            53611..53760
                     /locus_tag="OQQ57_000054"
     CDS             53611..53760
                     /locus_tag="OQQ57_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1954957.1"
                     /translation="MVIEYWLSNNAGGSVTANGIAGKVTIRQLAIFKNYIKCHSIWFL
                     GVSLG"
     gene            53961..55544
                     /locus_tag="OQQ57_000055"
     CDS             53961..55544
                     /locus_tag="OQQ57_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCS1954958.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLHKDGELEYEV"
     gene            complement(55818..57671)
                     /gene="asmA"
                     /locus_tag="OQQ57_000056"
     CDS             complement(55818..57671)
                     /gene="asmA"
                     /locus_tag="OQQ57_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HCS1954959.1"
                     /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
                     QVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
                     AIEQINWQLQGADLPKQGIHGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(57693..58274)
                     /gene="dcd"
                     /locus_tag="OQQ57_000057"
     CDS             complement(57693..58274)
                     /gene="dcd"
                     /locus_tag="OQQ57_000057"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004942378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HCS1954960.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(58366..59007)
                     /gene="udk"
                     /locus_tag="OQQ57_000058"
     CDS             complement(58366..59007)
                     /gene="udk"
                     /locus_tag="OQQ57_000058"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002211872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HCS1954961.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            59325..62622
                     /locus_tag="OQQ57_000059"
                     /pseudo
     CDS             59325..62622
                     /locus_tag="OQQ57_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
     gene            complement(62661..63518)
                     /gene="alkA"
                     /locus_tag="OQQ57_000060"
     CDS             complement(62661..63518)
                     /gene="alkA"
                     /locus_tag="OQQ57_000060"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HCS1954962.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAAR
                     PGLRLPGCIDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDGTDEL"
     gene            63652..65004
                     /gene="yegD"
                     /locus_tag="OQQ57_000061"
     CDS             63652..65004
                     /gene="yegD"
                     /locus_tag="OQQ57_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCS1954963.1"
                     /translation="MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTRE
                     AVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
                     QGLGGDEANAQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS
                     YRLVRSAEESKIALSNAAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGISIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(65016..66938)
                     /gene="yegI"
                     /locus_tag="OQQ57_000062"
     CDS             complement(65016..66938)
                     /gene="yegI"
                     /locus_tag="OQQ57_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310906.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HCS1954964.1"
                     /translation="MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTP
                     PPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYS
                     PAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS
                     DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGR
                     HPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQ
                     AFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGVIY
                     FVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYI
                     ILIEIALSALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKAYKAEIQQRREAFNRA
                     KMDYEHLVSQIQQLGGLEGFIAKRAMLEKMKDEILGLPEEEKRALAALYDTARERQKQ
                     KFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASC
                     DRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLR
                     QAAEKLAQAQADLSRC"
     gene            complement(66935..67696)
                     /gene="pphC"
                     /locus_tag="OQQ57_000063"
     CDS             complement(66935..67696)
                     /gene="pphC"
                     /locus_tag="OQQ57_000063"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase PphC"
                     /protein_id="HCS1954965.1"
                     /translation="MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFL
                     ADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEA
                     KALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFI
                     TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
     gene            complement(67693..68352)
                     /locus_tag="OQQ57_000064"
     CDS             complement(67693..68352)
                     /locus_tag="OQQ57_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HCS1954966.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGL
                     VTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
                     V"
     gene            complement(68573..68632)
                     /gene="ibsA"
                     /locus_tag="OQQ57_000065"
     CDS             complement(68573..68632)
                     /gene="ibsA"
                     /locus_tag="OQQ57_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsA"
                     /protein_id="HCS1954967.1"
                     /translation="MMKHVIILVILLVISFQAY"
     gene            complement(68905..68961)
                     /locus_tag="OQQ57_000066"
     CDS             complement(68905..68961)
                     /locus_tag="OQQ57_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCS1954968.1"
                     /translation="MMKLLIIVVLLVISFPAY"
     gene            complement(69233..69289)
                     /locus_tag="OQQ57_000067"
     CDS             complement(69233..69289)
                     /locus_tag="OQQ57_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCS1954969.1"
                     /translation="MMKLLIIVVLLVISWPAY"
     gene            69568..70815
                     /gene="mdtA"
                     /locus_tag="OQQ57_000068"
     CDS             69568..70815
                     /gene="mdtA"
                     /locus_tag="OQQ57_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HCS1954970.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIIAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGMIKVKARFNNQNDVLFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            70815..73937
                     /gene="mdtB"
                     /locus_tag="OQQ57_000069"
     CDS             70815..73937
                     /gene="mdtB"
                     /locus_tag="OQQ57_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HCS1954971.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLIFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYSAFGQRLISTIYTQANQYRVVLEHNTEITPGLAALDTIRLTSSDGGVVPLSSIAKV
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGST
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFARHEEEA"
     gene            73938..77015
                     /gene="mdtC"
                     /locus_tag="OQQ57_000070"
     CDS             73938..77015
                     /gene="mdtC"
                     /locus_tag="OQQ57_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HCS1954972.1"
                     /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGKLYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVEPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG
                     GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            77016..78432
                     /locus_tag="OQQ57_000071"
                     /pseudo
     CDS             77016..78432
                     /locus_tag="OQQ57_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            78429..79832
                     /gene="baeS"
                     /locus_tag="OQQ57_000072"
     CDS             78429..79832
                     /gene="baeS"
                     /locus_tag="OQQ57_000072"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HCS1954973.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
                     SAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            79829..80551
                     /gene="baeR"
                     /locus_tag="OQQ57_000073"
     CDS             79829..80551
                     /gene="baeR"
                     /locus_tag="OQQ57_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HCS1954974.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            80742..81074
                     /locus_tag="OQQ57_000074"
     CDS             80742..81074
                     /locus_tag="OQQ57_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HCS1954975.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT
                     SQTVKDNT"
     gene            81197..82597
                     /locus_tag="OQQ57_000075"
     CDS             81197..82597
                     /locus_tag="OQQ57_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000911981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HCS1954976.1"
                     /translation="MLKGLRTLFSRRVLFNVEMNNSVDCELLLIQQQLQALIAEPGNY
                     LAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKEVRLA
                     ATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYW
                     LTCPDKKLSRAVLQTLIEYGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAV
                     LTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNNMLIRLRAKNMLHEVMDVP
                     QFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKA
                     NPRCGVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYC
                     RLYHNLNKWDGLILLLQSQHKLTEEFAGKQLAIWQRNFNLSGIQPNALQRQQLQALFT
                     RNPELHNRLWGYIPFK"
     gene            82918..84279
                     /gene="yegQ"
                     /locus_tag="OQQ57_000076"
     CDS             82918..84279
                     /gene="yegQ"
                     /locus_tag="OQQ57_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HCS1954977.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREYFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLEHMENAKGVAMPVAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(84609..84926)
                     /locus_tag="OQQ57_000077"
     CDS             complement(84609..84926)
                     /locus_tag="OQQ57_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1954978.1"
                     /translation="MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDN
                     QYYTEAEASLARSRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFK
                     CGE"
     gene            85340..86238
                     /gene="yegS"
                     /locus_tag="OQQ57_000078"
                     /pseudo
     CDS             85340..86238
                     /gene="yegS"
                     /locus_tag="OQQ57_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
     gene            complement(86320..87093)
                     /locus_tag="OQQ57_000079"
     CDS             complement(86320..87093)
                     /locus_tag="OQQ57_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020238881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1954979.1"
                     /translation="MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLE
                     QKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVI
                     LDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGS
                     IAERSLQDINADLMFVGADGIDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNR
                     RGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV"
     gene            complement(87199..88239)
                     /gene="gatD"
                     /locus_tag="OQQ57_000080"
     CDS             complement(87199..88239)
                     /gene="gatD"
                     /locus_tag="OQQ57_000080"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCS1954980.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGSMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            complement(88287..89642)
                     /locus_tag="OQQ57_000081"
     CDS             complement(88287..89642)
                     /locus_tag="OQQ57_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HCS1954981.1"
                     /translation="MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
                     GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
                     GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     QARSRLQAKFGGQEFLIGLDPALLLGHTAVVSVSLIFIPLTILIAVCVPGNQVLPFGD
                     LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGG
                     MVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFITWRRARGFIKQEKAVLA
                     E"
     gene            complement(89646..89930)
                     /gene="gatB"
                     /locus_tag="OQQ57_000082"
     CDS             complement(89646..89930)
                     /gene="gatB"
                     /locus_tag="OQQ57_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HCS1954982.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG"
     gene            complement(89961..90413)
                     /gene="gatA"
                     /locus_tag="OQQ57_000083"
     CDS             complement(89961..90413)
                     /gene="gatA"
                     /locus_tag="OQQ57_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HCS1954983.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            complement(90483..91685)
                     /gene="gatZ"
                     /locus_tag="OQQ57_000084"
     CDS             complement(90483..91685)
                     /gene="gatZ"
                     /locus_tag="OQQ57_000084"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
                     /protein_id="HCS1954984.1"
                     /translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE
                     ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA
                     MEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQ
                     REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIVRGLTEALTRVIA
                     IVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA
                     ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF
                     NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQS
                     GELSAIPH"
     gene            complement(91714..92568)
                     /gene="gatY"
                     /locus_tag="OQQ57_000085"
     CDS             complement(91714..92568)
                     /gene="gatY"
                     /locus_tag="OQQ57_000085"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HCS1954985.1"
                     /translation="MHVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATEPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            complement(92876..93928)
                     /gene="fbaB"
                     /locus_tag="OQQ57_000086"
     CDS             complement(92876..93928)
                     /gene="fbaB"
                     /locus_tag="OQQ57_000086"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HCS1954986.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
                     EAGCNCVVSTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            94185..95462
                     /locus_tag="OQQ57_000087"
     CDS             94185..95462
                     /locus_tag="OQQ57_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1954987.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMSTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFRESDNEITAIKVDDRDIALTQGEVK"
     gene            95459..96463
                     /locus_tag="OQQ57_000088"
     CDS             95459..96463
                     /locus_tag="OQQ57_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HCS1954988.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRTTTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV
                     "
     gene            96460..97425
                     /locus_tag="OQQ57_000089"
     CDS             96460..97425
                     /locus_tag="OQQ57_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1954989.1"
                     /translation="MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
                     AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
     gene            complement(97399..98145)
                     /locus_tag="OQQ57_000090"
     CDS             complement(97399..98145)
                     /locus_tag="OQQ57_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCS1954990.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFCSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYSISHCRSDLYVFVCEE"
     gene            complement(98197..99015)
                     /locus_tag="OQQ57_000091"
     CDS             complement(98197..99015)
                     /locus_tag="OQQ57_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HCS1954991.1"
                     /translation="MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVAAPVQVRLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP"
     gene            complement(99080..99880)
                     /gene="thiD"
                     /locus_tag="OQQ57_000092"
     CDS             complement(99080..99880)
                     /gene="thiD"
                     /locus_tag="OQQ57_000092"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HCS1954992.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            complement(99877..100665)
                     /gene="thiM"
                     /locus_tag="OQQ57_000093"
     CDS             complement(99877..100665)
                     /gene="thiM"
                     /locus_tag="OQQ57_000093"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HCS1954993.1"
                     /translation="MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVA
                     VGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     regulatory      complement(100700..100796)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(100888..101160)
                     /gene="rcnR"
                     /locus_tag="OQQ57_000094"
     CDS             complement(100888..101160)
                     /gene="rcnR"
                     /locus_tag="OQQ57_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II)-binding transcriptional repressor
                     RcnR"
                     /protein_id="HCS1954994.1"
                     /translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA
                     IRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK"
     gene            101281..102105
                     /gene="rcnA"
                     /locus_tag="OQQ57_000095"
     CDS             101281..102105
                     /gene="rcnA"
                     /locus_tag="OQQ57_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt efflux protein RcnA"
                     /protein_id="HCS1954995.1"
                     /translation="MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIA
                     IKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTA
                     FWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHAND
                     IKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLA
                     LTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR"
     gene            102324..102662
                     /gene="rcnB"
                     /locus_tag="OQQ57_000096"
     CDS             102324..102662
                     /gene="rcnB"
                     /locus_tag="OQQ57_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II) efflux transporter accessory
                     subunit RcnB"
                     /protein_id="HCS1954996.1"
                     /translation="MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIA
                     DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK
                     AYDGEIFYHR"
     gene            complement(102744..103778)
                     /locus_tag="OQQ57_000097"
     CDS             complement(102744..103778)
                     /locus_tag="OQQ57_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative fimbrial-like adhesin protein"
                     /protein_id="HCS1954997.1"
                     /translation="MEIRIMLFILMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQ
                     MATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTS
                     FTNGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG
                     KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLEGIPVSQLPATGN
                     KATINSKKGDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFIL
                     ESNGSPVTLLNITDNSKGYTNLKEIAAKSKLTDTTVSIPITASYYVYDTNKVKSGALE
                     ATALINVKYD"
     gene            complement(103794..106274)
                     /locus_tag="OQQ57_000098"
     CDS             complement(103794..106274)
                     /locus_tag="OQQ57_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCS1954998.1"
                     /translation="MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANI
                     RLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGK
                     QCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL
                     SQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGF
                     AQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVT
                     IEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQ
                     PGVSKYDFAAGRSHIEGASKQSEFVQVGYQYGFNNLLTLYGGSMVANNYYAFTLGTGW
                     NTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRT
                     FNDHVWANNKDNYRRDENDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLW
                     RDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHHEEKRFNIFISIPFDWGDDV
                     TTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANL
                     TWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDA
                     YVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVL
                     VNFDTDQRKPWFIKALRADGQPLMFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVN
                     VAIDKQQGLSCTITFGKEIDESRNYICQ"
     gene            complement(106290..106964)
                     /locus_tag="OQQ57_000099"
     CDS             complement(106290..106964)
                     /locus_tag="OQQ57_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCS1954999.1"
                     /translation="MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQG
                     NRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKES
                     IFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
                     LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGN
                     YISDKI"
     gene            complement(107044..107586)
                     /locus_tag="OQQ57_000100"
     CDS             complement(107044..107586)
                     /locus_tag="OQQ57_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1955000.1"
                     /translation="MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFE
                     AGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDK
                     ITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLT
                     DNSVQSGDVLSSLVMRVAQD"
BASE COUNT        27255 a        27387 c        25447 g        27537 t
ORIGIN      
        1 cagtgacaaa gggatgccag cgtttttcaa acagaatatg agcgatcccg gttcggcgcg
       61 gcggtaaggt cgcgactttg agttttggct tcttcaactc tttcatcacc acccagagcg
      121 ttatcaccag caaaacggca accaacggcc acacagacaa attaaaagtc tcagcaatag
      181 agttatgttc agtactgtag tgctgcaagg tttgatttaa accactggca tgtggagaac
      241 gcatcaccgc actcatcacc atataagtga aaagcgcgat ccaactgccg atcaatccct
      301 cacccgcgcg ataccaggtc ccggtggcac atccacccgc cagaacaatt cccagcccga
      361 agatataccc acctataaca gtaccaggcc acgggaacgc cccggcttcg taagtcagta
      421 ggcccgccta aattaacgca aaaaccccca cactttgtac cgaaattgca atcagcaagg
      481 cgtaaaacat gcgattattt ttcgcgatat acatatcgcg aaaaccacca gtcaggcaaa
      541 aacgcccacg ctgcatgaca aatcccagca gagcaccaca aattagcccg cttaatatca
      601 ttgaaaacat aaattaatta accagatgaa tgttaatgag gaaattattc atgactggtg
      661 gaatgcagac caataaccaa attctctaaa ttagaacaaa tggttcttaa tgaggatttc
      721 gataaaaaag aataaaaaaa ccggagccaa atattcattc gactccggtt gattattaga
      781 aaagatgatt atgctacgtc ttcgtactgc ggaaccgggt tacggaagct cttggtgacg
      841 caagccaggt aaatcagacc gatagcagcc cagatcagac ccagaaccat tgagctttct
      901 tccaggttaa cccacagcgc accaacggtc agcgcaccac acatcggcag gaacagatac
      961 tggaagtgat ctttcagcgt cttattacgc ttctcacgga tccagaactg cgagatgacc
     1021 gacaggttaa cgaaggtgaa cgccaccagc gcaccaaagt taatcagcgc cgttgccatt
     1081 accaggtcga agttgattgc cagcagggca atcgcgccaa ccaggatgat gttcatcgcc
     1141 ggagtacgcc atttcgggtg tacataaccg aagaagcttt tcgggaatac gccgtcacga
     1201 cccattacgt acatcagacg cgctacgcct gcatgcgccg ccataccgga cgccagtacg
     1261 gtaatggtgg agaagatcag cgcgccaacc tggaacgctt tacccgcaac gtacagcatg
     1321 atttcaggct gtgacgcatc cggatcttta aagcgagaga tatccgggaa gtacagctgc
     1381 aggaagtaag ttgcaaagat gaagatcatg ccgccgatca gcgcggtcag gaaaatcgca
     1441 cgcgggatca cgcgctctgc atctttggtt tcttccgaca ggttgctgat gccgtcaaag
     1501 ccggtaaagg agaagcacag gattgtcgcc ccggtaatca tcgggataac atgcgcatcg
     1561 ccagaccaga atggacgagt gctcgccagc gtaccagcgc cttcaccttc aaatacgcca
     1621 taaacaacca tgcccagaat caccgcgatc agcaccacct gcaacacgac gattacagtg
     1681 ttgaagttcg ctacggattt cagactacgc aggttaaagg cggtcatgaa ggccaccaac
     1741 gccaccacaa acatccacga tgggatggaa ggcaccagag cttcaaaata gattttcgcc
     1801 agcagaatgt tgatcatcgg cgcgaacaga tagtcgagca gagaagacca acccaccata
     1861 aagccgacag tcgggctaat ggatttctgg gcgtaagtgt atgcagagcc agcagaagga
     1921 tagcggcgaa ccagcttccc gtagctcaga gccgtaaaca ggatcgcaat caatgcgaac
     1981 gcataggctg tcggcacatg accatccgtg aggcctgaaa cgataccaaa agtatcaaac
     2041 agcgtcatcg gctgcatata ggcaagaccc atcattacaa ccggaactaa cgtaagcgtt
     2101 ttacgcaatt ccacgcgaga ggtgtttgga gtaacgttat gcgacatggt cattctcctt
     2161 tacggtgata accgtcgcgt aagcaaaaaa ttgccccatt tttttggatt cctcagcgac
     2221 aacaactgtc gatttttagt aaatatctat ccggtacgaa gcccggcctc ttggtatgaa
     2281 tgattggttt gaagcaaaaa ataaccgacg ctgatgaaac gtcggttttt agtcattttt
     2341 tgacagcggc gcattgtgcc taaatggggg ggaaatgaca agagaatgag aggcttgtca
     2401 taataatttt tctttaaatg gctgattttc cgtcatcaga ttttgcataa acaccggcga
     2461 tcgcactatt tgctaaaatt tcatcccgcc accagccact ggcaagtcct gcggtctgtt
     2521 cattccagcc aatccagacg ggttcaaaga gagtttgggc gaccactttc ttctcgatta
     2581 acgcgccact atcgagaaaa tgttgcgcca gataacgggg taaatagccg cagccgaggc
     2641 cgctaatttg cagctccagc ttggttttaa aatcgaaaac ggtaatggct tcttgttcgt
     2701 cgagaagttg tgaggccgta gaagcgcctg cctgcgcagt atcccccacc acaatcgccc
     2761 gatatcgctt aataatacga cgatttaacg gctcttcttc cagggctaac ggatgatgag
     2821 gcgcgaccgc aaagacttgt tccagatcgc ccaaccgtga aaaaccaaac tcactggaag
     2881 atggtggctc atgcatcgcg ccaacaataa tatccgctcg cccctgagtc agggcatccc
     2941 atgaaccacc cagtacgcca ttgataaact tcaggcgcgt cacgctatga tgttgataaa
     3001 aagcttcaat cagtggcgct agcagagaaa aaggaaacgt gtcgtccacg ccaatcacca
     3061 gctcgttttc ccagccttca tgcagtttga tcgcctgctt ttccagttcc cgcacggtat
     3121 gcagaacttc ccgccctttc tctaataaca tttttccggt gcgggtgaat ttagcgcggt
     3181 gaccgctacg atcaagcaat tgaatattaa ggtcgctttc cagcttgtga acggtgtaac
     3241 tcagagcgga cggcgtcttg tagagtttgg ccgacgccgc cgcaaaactg ccttcttttt
     3301 ctaaggcatc gaggatcatc aacacatcca gcagtggttt catacacgcc cccttgcagt
     3361 gtatgcggcg tcctgctggc gtgatcgttt actccagcgg cattaccagc ggatcgggat
     3421 actggtattc aaatcccagt tcattacaaa tccgactgcc atcaataatc ttacctttgc
     3481 cgctgtccag actatttctg aactgcggag gttccagccc cagtaaacgg gccatctgcg
     3541 gatagaaaac attacgcgca gggtgagctg gcgcacatat attatagatg tgtccgcctt
     3601 taggtgcctg taacaacaga gtgatagcgc caataacatc ttctaaatgg actaaattaa
     3661 caccatgttc accatcaggc gcggtttttc cggcaaagaa gcgtccggga tgacgccccg
     3721 gtccgaccag gcccgcaaga cgcagaatat cgaccgaagt accgggtaaa ttgtgcagcc
     3781 agtcttcgag ttcttctaat actcgtccac tgttggttac cggattacgc ggggtagttt
     3841 ctttcaccat gccttgcgca tcgccataga cagatgttga gctggtaaaa ataattcggg
     3901 gaatacgatg ggccagcgcg ctatccacta actcttgtac cgcttgtaaa tagaactcat
     3961 cgccggagcc gctacgacgt gccggaagcg taatgaccag tgcatcggca tccatcaggg
     4021 catccagatc gtcagaatcg caaactaact caggctccat gcgaagcaga tagctatcaa
     4081 tgccactcat tcgggccgct tcgacaccat cttgtgtggt tttactcccg gtgacttgcc
     4141 agcctcgcgc tgaaagtgac atcgccagcg gcatgcctaa ccaccctaac ccgacaattg
     4201 cgaccttttt catccgttat ctcctgatac accttagatc tataaggcta cgctagcgta
     4261 tcaaaactga caattcattc tatgaatgaa tctgttcaat aatgataacg acatgctgca
     4321 atgagcagtg aatcgtcggt aaccgcgtat accagacggt gctcctctgt aatgcgtcgg
     4381 gactagaaac ctgacaaatt atgtttcagg ggttctggct tccccttacc ttcaaatggc
     4441 gttctgcggg tatctttgat aagttcattg atctttttaa caattcgctt atctgtttcc
     4501 tgccagtaca gataatcatc ccatgattcc tcagaccaga ttagtttcac tcaataatgt
     4561 ccttttctgt tcctttgcct gatttcaggc tatcgattga gtccatcaat ctccgggcgt
     4621 tagcggggga acgcagtaga taagccgtct cttccagcga gttgtattct tcgagtgaca
     4681 tcagaacaca agcctcccca ttctgacgag taataaggat cggggcatga tcttcaacgg
     4741 ctttcatcat tgttgccgac aaattctgac gcgcttcgct gtagctaatt gtacgcatgt
     4801 caatctcctc ttttgtacag ttcattgtac aatgatgggc gttaattaac tatttattaa
     4861 ttagtttgta gatcaaggta ttgtcagtga gacgaaaatc caggcttcgc tatttttggt
     4921 gccgtcagct tagaggacag tcctcttagc cccctccttt ccccgctcat tcattaaaca
     4981 aatccatcgc catagaatat ataaaaaagc ccttgctttc taacgtgaaa gtggtttagg
     5041 ttaaaagaca tcagttgaat aaacattcac agagactttt atgacacgcg ttcaatttaa
     5101 acaccaccat catcaccatc atcctgacta gtctttcagg cgatgtgtgc tggaagacat
     5161 tcagatcttc cagtggtgca tgaacgcatg agaaagcccc cggaagatca ccttccgggg
     5221 gcttttttat tgcgcggttg ataacggttc agacaggttt aaagaggaat aagaaaatga
     5281 cagacaacac tcgtttacgc atagctatgc agaaatccgg ccgtttaagt gatgactcac
     5341 gcgaattgct ggcgcgctgt ggcattaaaa tcaatcttca cacccagcgc ctgatcgcga
     5401 tggcagaaaa catgccgatt gatattctgc gcgtgcgtga cgacgacatt cccggtctgg
     5461 taatggacgg cgtggttgac ctcgggatta tcggcgaaaa cgtgctggaa gaagagctgc
     5521 ttaaccgccg cgcccagggt gaagatccac gctactttac cctgcgtcgt ctggatttcg
     5581 gcggctgccg actttcactg gcaacgccgg ttgatgaagc ctgggatggc ccgctctcct
     5641 taaacggtaa acgtatcgcc acctcttatc ctcacctgct caagcgttat ctcgaccaga
     5701 aaggtatctc ttttaaatcc tgcttactga acggttctgt tgaagtcgcc ccgcgtgccg
     5761 gactggcgga tgcgatttgc gatctggttt ccaccggtgc cacgctggaa gctaacggcc
     5821 tgcgcgaagt cgaagttatc tatcgctcga aagcctgcct gatacaacgc gatggcgaaa
     5881 tggaagaatc caaacagcaa ctgatcgaca aactgctgac ccgtattcag ggtgttatcc
     5941 aggcgcgtga atcaaaatac atcatgatgc acgcaccgac cgaacgtctg gatgaagtca
     6001 tcgccctgct gccaggtgcc gaacgcccaa ctattctacc gctggcgggt gatcaacagc
     6061 gcgtagcgat gcacatggtc agtagcgaaa ccctgttctg ggaaacgatg gaaaaactga
     6121 aagcgctggg tgccagttca atcctggtcc tgccgattga gaagatgatg gagtgatcgc
     6181 catgagcttt aacacaatca ttgactggaa tagctgtact gcggagcaac aacgccagct
     6241 gttaatgcgc ccggcgatct ccgcttctga aagcattacc cgcactgtta acgatattct
     6301 cgataacgtg aaagcacgcg gcgatgaggc cctgcgggaa tacagcgcga agtttgataa
     6361 aaccacggtt accgcactga aggtgtctgc tgaggaaatt gccgccgcta gcgaacgcct
     6421 gagcgacgag ctaaaacagg cgatggcggt ggcagtgaag aatattgaaa ccttccacac
     6481 tgcgcaaaaa ctgccgccgg tagatgtaga aacgcagcca ggcgtgcgtt gccagcaggt
     6541 cacgcgcccg gtcgcttcag ttgggttgta tattcctggc ggctccgccc cgctcttctc
     6601 aacggtatta atgctggcga ctccggcgcg tattgcgggc tgtaaaaaag tggtgctgtg
     6661 ctcaccgccg ccgattgccg atgagatcct ttatgcggcg cagctgtgcg gtgtgcagga
     6721 cgtgtttaac gtcggcggcg cacaggccat tgccgcactg gcgtttggta cggaatctgt
     6781 gccgaaagtg gacaaaatct tcgggccggg caacgccttt gtcaccgaag cgaaacgtca
     6841 ggtgagccag cgtctggacg gtgcggcgat cgatatgccc gcaggcccgt cggaagtgtt
     6901 ggtcattgcc gacagtggcg caacgccgga tttcgtggct tctgatttgc tttctcaggc
     6961 tgaacacggc ccggactcac aggtgatttt actgacgccc gctgctgata tggcgcgtcg
     7021 cgttgccgag gctgtcgaac gccagctggc agaactgccg cgtgctgaaa ccgcccgtca
     7081 ggcactgaac gccagccgcc tgatcgtgac taaagattta gcgcagtgcg tagagatctc
     7141 caaccagtac ggcccggagc acctgatcat ccagacccgc aacgcccgcg atctggtcga
     7201 tggcattacc agtgccggtt cggtatttct tggtgactgg tcactggaat cggcaggtga
     7261 ttacgcctcc ggcaccaacc acgttctgcc gacttacggt tacaccgcca cctgttccag
     7321 cctcgggctg gcagatttcc agaagcgcat gaccgtgcag gaactgtcga aagaaggttt
     7381 ctccgcgctg gcttcgacca ttgaaacatt ggccgccgcc gagcgcctga ccgcccataa
     7441 aaatgccgtt actttacgtg ttaacgccct taaggagcaa gcatgagcat cgtgactatt
     7501 accgatttag cgcgtgaaaa cgtgcgcaac ctgacgccgt atcagtcggc gcgtcgtctg
     7561 ggcggtaacg gcgatgtctg gctgaacgcc aacgaatatc ccacagccgt ggaatttcag
     7621 cttactcagc aaacgctcaa ccgctacccg gaatgtcagc cgaaagcggt gattgaaaat
     7681 tacgcgcaat atgcaggcgt aaaaccggaa caggtgctgg tcagccgtgg cgcggacgaa
     7741 ggtattgaac tactgattcg cgctttttgc gaaccgggta aagacgccat cctctactgc
     7801 ccgccaacgt acggcatgta cggcgtcagc gccgaaacca ttggcgtcga gtgccgcaca
     7861 gtgccgacgc tggacaactg gcaactggat ttacagggca tttccgacaa gctggaaggc
     7921 gtaaaagtgg tctatgtttg cagccccaac aacccgaccg ggcaactgat caatccgcag
     7981 gattttcgca ctctgctgga gttaacccgc ggtaaagcga ttgtggttgc cgatgaagcc
     8041 tatatcgagt tttgcccgca ggcatcgctg gctggctggc tggcggaata tccgcacctg
     8101 gctattttgc gcacactgtc gaaagctttt gctctggcgg gccttcgttg cggatttacg
     8161 ctggcaaacg aagaagtcat caacctgctg atgaaagtga ttgcccccta cccgctctcg
     8221 acgccggttg ccgacattgc ggcccaggcg ttaagcccgc aggggatcgt cgccatgcgt
     8281 gagcgggtgg cgcaaattat tgcagaacgc gaatgcctga ttgccgcact gaaagagatc
     8341 ccctgcgtgg agcaggtttt cgactctgaa accaactaca ttctggcgcg ctttaaagcc
     8401 tccagtgcag tgtttaaatc tttgtgggat cagggcatta tcttacgtga tcagaataaa
     8461 cacccctctt taagcggctg cctgcgaatt accgtcggaa cccgtgaaga aagccagcgc
     8521 gtcattgacg ccttacgtgc ggagcaagtt tgatgagtca gaagtatctt tttatcgatc
     8581 gcgatggaac cctgattagc gaaccgccga gtgattttca ggtggaccgt tttgataaac
     8641 tcgcctttga accgggcgtg atcccggagc tgctgaagct gcaaaaagcg ggctacaagc
     8701 tggtgatgat cactaatcag gatggtctgg gaacacaaag tttcctgcag gcggattttg
     8761 atggcccgca caacctgatg atgcagatct tcacctcgca aggcgtgcag tttgatgaag
     8821 tgctgatttg tccgcacctg cccgccgatg agtgcgactg ccgtaagccg aaagtaaaac
     8881 tggtggaacg ttatctggct gagcaagcga tggatcgcgc taacagttat gtgattggcg
     8941 atcgcgcgac cgacattcaa ctggcggaaa acatgggtat taatggttta cgctacgacc
     9001 gcgaaaccct gaactggccg atgattggcg agcaactcac taaacgagac cgttacgccc
     9061 atgtagtgcg caacaccaaa gagacgcaaa ttgacgtcca ggtgtggctg gatcgcgaag
     9121 gtggcagcaa gattaacacc ggcgttggct tctttgatca catgctggat cagatcgcca
     9181 cccacggcgg tttccgtatg gaaatcaacg tcaaaggcga cctctatatc gacgatcacc
     9241 acaccgtcga agataccggc ctggcgctgg gtgaagcgtt aaaaattgcc cttggcgaca
     9301 aacgcggtat ttgccgcttt ggttttgtgc taccgatgga cgaatgcctt gcccgctgtg
     9361 cactggatat ctctggtcgc ccgcacctgg aatataaagc cgaatttacc taccagcgcg
     9421 tcggcgatct cagcaccgag atgatcgagc acttcttccg ttcgctgtct tacaccatgg
     9481 gcgtgacgct acacctgaaa accaaaggta aaaacgatca ccaccgtgta gagagcctgt
     9541 tcaaagcctt tggtcgcacc ctgcgccagg ccatccgcgt ggaaggcgac accctgccct
     9601 cgtcgaaagg agtgctgtga tgaacgtggt gatcctggat accggctgcg ccaacctgaa
     9661 ctcggtgaag tctgccattg cgcgccacgg ttatgaaccc aaagtcagcc gtgacccgga
     9721 cgtcgtgttg ctggccgata aactattttt acccggcgta ggcaccgcac aagcagcgat
     9781 ggatcaggtg cgtgagcgcg aactgtttga tctcatcaaa gcctgtaccc aaccggtgct
     9841 gggcatctgc ttagggatgc aactgcttgg gcggcgcagc gaagagagca acggcgtcga
     9901 cttgctgggc atcatcgacg aagacgtgcc gaaaatgacc gactttggtc tgcccctgcc
     9961 gcatatgggc tggaaccgcg tttacccgca ggcaggcaac cgcctgtttc aggggattga
    10021 agatggcgcg tacttttact ttgttcacag ctacgcaatg ccagtcaatc cgtggaccat
    10081 cgcccagtgt aattacggcg aaccgttcac cgcggcggta caaaaagata acttctacgg
    10141 cgtgcagttt cacccggagc gttctggtgc cgctggcgct aagttgctga aaaacttcct
    10201 ggagatgtga tgattattcc ggcattagat ttaatcgacg gcaccgtggt gcgtctccat
    10261 cagggcgatt acggcaaaca gcgcgattac ggtaacgacc cgctgccgcg cttacaggat
    10321 tacgcagcgc agggtgccga agtgctgcat ctggtggatc tgaccggagc aaaagatccg
    10381 gcaaaacgtc aaatcccgct gattaaaacc ctggtcgcgg gcgttaacgt tcctgtgcag
    10441 gttggcggcg gcgtgcgtag cgaagaagac gtggcggcgt tactggaagc gggcgttgcg
    10501 cgcgtggtgg ttggctccac cgcggtgaaa tcaccagaaa tggtgaaagg ctggtttgaa
    10561 cgtttcggtg ccgatgcctt agtactggcg ctggatgtcc gtattgacga gcaaggtaac
    10621 aagcaggtgg cggtgagcgg ctggcaagag aactcgggcg tttcactgga acaactggtg
    10681 gaaacctatc tgcccgtcgg cctgaaacat gtgctttgta ccgatatctc gcgcgacggc
    10741 acgctggcag gttctaacgt ctctttatat gaagaagtgt gcgccagata tccgcaggtg
    10801 gcatttcagt cctccggcgg cattggcgac attaacgatg ttgctgctct acgtggtact
    10861 ggcgtgcgcg gcgtaatagt tggtcgtgca ttactggaag gtaaattcac cgtgaaggag
    10921 gccatcgcat gctggcaaaa cgcataattc cgtgtctcga cgttcgtgat ggtcaggtgg
    10981 tgaaaggcgt acagtttcgc aaccatgaaa tcattggcga tatcgtgcca ctggcaaaac
    11041 gctacgccga agaaggtgca gatgaactgg tgttctacga tatcaccgct tccagcgatg
    11101 gccgtgtggt agataaaagc tgggtatctc gcgtggcgga agtgatcgac attccgtttt
    11161 gtgtggcggg tgggattaag tctctggaag atgccgcgaa aattctttcc tttggcgcgg
    11221 ataaaatttc cataaactcg cctgcgctgg cggacccgac gttaattact cgcctggccg
    11281 atcgctttgg cgtgcagtgt attgtagtcg gtattgatac ctggtacgac ggcgaaaccg
    11341 gtaaatatca tgtgaatcaa tataccggcg atgaaagccg cacccgcgtc actcagtggg
    11401 aaacactcga ctgggtacag gaagtgcaaa aacgcggtgc cggagaaatc gtcctcaaca
    11461 tgatgaatca ggacggcgtg cgtaacggtt acgacctcga acaactgaaa aaagtgcgtg
    11521 aagtttgcca cgtcccgcta attgcctccg gtggcgcggg caccatggaa cacttcctcg
    11581 aagccttccg cgatgccgac gttgacggcg cgctggctgc ttccgtattc cacaaacaaa
    11641 taatcaatat tggtgaatta aaagcgtacc tggcaacaca gggcgtggag atcaggatat
    11701 gttaacagaa caacaacgtc gcgaactgga ctgggaaaaa accgacggac ttatgccggt
    11761 gattgtgcag cacgcggtat ccggtgaagt gttaatgctg ggctatatga acccggaagc
    11821 cttagacaaa accatcgaaa gcggcaaagt caccttcttc tcgcgcacta aacagcgact
    11881 gtggaccaaa ggcgaaacgt cgggcaattt cctcaacgta gtaaatattg cgccggactg
    11941 cgacaacgac acgctactgg tactggcgaa tcctatcgga ccaacctgcc acaaaggcac
    12001 cagcagctgc ttcggcgaca ccgctcacca atggctgttc ctgtatcaac tggaacaact
    12061 gctcgccgaa cgtaaatctg ccgacccgga aacctcttac accgccaaac tgtatgccag
    12121 cggcaccaaa cgcattgcgc agaaagtggg cgaagaaggc gtggaaaccg cactggccgc
    12181 gacggtacat gaccgctttg agctcaccaa cgaggcgtct gatttgatgt atcacctgct
    12241 ggtattgttg caggatcagg atctggattt aacaacggtg attgagaacc tgcgtaaacg
    12301 tcatcagtga gttgcggggt aagcggatgc gatgttgtcg tcgcatccgg caaaaaaaac
    12361 gggcaaggtc tcaccaccct gcccattttc tttaaaaccg aaaagattac ttcgcgttgt
    12421 aattacgcag agcgttacgc cccagcacaa tccccgcgcc aaccatgccg cccagcagca
    12481 ctgccaaaat caaggtaatt gcctttttcg ggctatcgcg acgaataggt aacgtcggtt
    12541 tcattacata gcggtaagca tgaatatcaa gatcatcaac ctttaagctt tcgatatcca
    12601 gcaggttttg acgtgtctga tagtagtttg atgagaacac caacggacgg gtcgcctcat
    12661 gcttaatcat cgactccagc gcttcgctcc ccaaaaggaa caacgtatct tgtgtcacat
    12721 cttcagtctg ctgaacctgt ggctttgtca cctgcgcctg attcgcatac tgcaacgctt
    12781 cctgaatctg acggatacgc agatctttct gctcctgcgc gactacttcc tgagttttca
    12841 gagaatcctg caagtttttc atacgcagcg cgatgttgtc tttcaggtct ttttccagtt
    12901 cttcgtttac ctggtcgtca acttgctgga tatactgcgc cagctgtttc tgcgcacctt
    12961 cagctgtttc accaacataa gaaaccgcta aaggtaagga ctgattttta acggtaggct
    13021 caatggtcag tttttcaggt tcttcctgat tatccagcgt ttccgctaat gctgagaaag
    13081 cagtgctgta acgtccgata agtgaagtct gaatgtcgga gactttcggt acagccggac
    13141 cgtaaatcac attcatcgcg ttggtataac cagcgatttg ccccacatca ggttgagtaa
    13201 cgatagctgt ggaagtccac ttttctttgg caacggccag ataccctata gccagggcaa
    13261 tagccacaat gacagagatg ataattgtca tcttgccgcg ccacaactgc accaggaaat
    13321 caatcaaatc aatctgttcc gggtcatggt tttgcccaga aacattatta ttttctactc
    13381 tcatcattac cctaacggac gaaataattt taagtcgcca tagtttagcg ataatcgcca
    13441 tgaatgctat aggataaatg ataaaaataa tgaattatta caaagggaac ataagagaat
    13501 cagggcgaaa atcgcactga taacaagatg ttagtcgctg ccaaaaagat cgcgggtgta
    13561 gactttgtct gccacatcct taagctcttc tgccatacgg ttggagataa tgacgtcggc
    13621 ttgtatagtc agcttagaac agctttgatt gtaaaatgag cacgttacca gaaaaaacag
    13681 ccaggtttag aactgatacc gattatcttt ttttcttgtc taacggtatg atttaacttt
    13741 cagttatgcc agatgaaaat tggctatatt ctagcctgag cgaggattat aaatgaaatt
    13801 tctggttacg ggagctgctg gctttatcgg tttctatgta agtaaacggc ttcttgcagc
    13861 tggtcatcag gttgtaggga ttgacaactt aaatgattat tacgatgtca acctcaaaca
    13921 agcacgactt gatttactca agcacgacaa tttcagtttt tataaaattg acctggccga
    13981 tcgcgagaaa atggccgcac tgtttgcaga cgagcggttc gatcgcgtaa taaacctcgc
    14041 tgcgcaagcc ggtgtacgtt actcccttga aaatcccaat gcatatgcag atgcaaacct
    14101 gattggattc ctgaacatac tggaaggatg ccgccataat aatgttcagc atctacttta
    14161 cgcttcctcc agttctgttt atggcatgaa ccgcaagatg cctttctcta cagatgactc
    14221 tgtagatcat cctgtttcgc tttatgcagc aactaaaaaa gcgaatgaac tcatggccca
    14281 tacgtattct catttgtatg gcttaccgac cacagggctg cgtttcttta cggtttatgg
    14341 tccatgggga cgtccggata tggcattatt taaatttact aaagccatgc tggaaggtaa
    14401 aagcattgat gtttacaact tcggcaaaat gaagcgtgac tttacttata ttgatgatat
    14461 tgccgaagct attattcgct tacaggatgt tattccagaa aaagatccac agtggactgt
    14521 agaaactgga tcgcctgcaa caagttcagc accgtatcgt gtctataaca ttggtaatag
    14581 ttcgcctgtg gagttgatgg actatatcaa tgccttagaa gaggctctgg gtattgaagc
    14641 caacaagaat atgatgcctc tccaacccgg tgatgtactg gaaaccagtg ctgatacaaa
    14701 agcactgtat gacgtaatag gattcaaacc tgaaacgtca gttaaagagg gggtaaagaa
    14761 ctttgtagaa tggtatcgta acttctataa agtttgattt tacaaaacca taagaaaagg
    14821 ccctaatata ttagggcctt ttcttagaat aaaacaaaat aattaatcat tgccaaacaa
    14881 gtcgcgcgta taaactttat ctgctacatc agccagatcg gcagacatac ggttagaaat
    14941 aataacatca gcttcttgtt tgaacgcatc cagatcacgt accacgcgcg aacggaaaaa
    15001 atcgtcctct ttcatcgctg gttcataaac gattactggc acacctttcg ccttgattcg
    15061 cttcataata ccctgaatcg aggaagcacg gaaattgtct gaaccactct tcataatcag
    15121 acgataaacg ccaacaactt tcggtttacg tgcaaggata gaatcggcaa taaagtcttt
    15181 tcgcgtgcgg ttagcatcaa caattgccga aatcagatta ttcggtacag attgatagtt
    15241 tgccagtaac tgcttggtat ctttcggcag acaataacca ccataaccaa atgagggatt
    15301 gttgtagtga ttaccgatac gcggatcaag gcaaaccccc tcaataattt ggcgggagtt
    15361 aagacccaga ctttcagcgt aactatctag ttcattaaaa taagccacac gcatcgccag
    15421 ataagtattg gcaaaaagtt taatcgcctc agcctcggtt gagtcagtaa acaatattgg
    15481 tatgtcttgc ttaatagcgc cttcctgtaa taacgctgca aaacgttcag cgcgatcgga
    15541 ttgctcacca atcacaatgc gtgatggatg caagttatca taaagagctt tcccttcgcg
    15601 taaaaactcc ggcgaaaaga tcacattttc aataccaaac cgttctttaa tggactctgt
    15661 aaaaccaaca gggatagttg attttataat cattaccgcg ttgggattaa tttctgtcac
    15721 atcgcgaatg accgcttcca cgcttgaggt attaaaataa tttgttttcg ggtcataatc
    15781 ggtaggcgtg gcaataataa cataatcggc atttttatac gcgtcatact tatctgtcgt
    15841 agcgcggaaa ttgagatctt tagtcgccag atactcttca atctccttat caacaatcgg
    15901 tgactgcttc ttgttaagca tgtctacttt ggcctgaacg atatccagtg caaccacttc
    15961 gtgattttgc gcaatcagaa taccatttga aagaccaaca taacctgttc ctgaaattgt
    16021 tattttcatt agctctgact tcttccggtt aaacatttag agtggtcatt aatccaccac
    16081 cacaacttca tctactgcgg gatttttaac gctaatgtag atgaactgtc aaggcagcga
    16141 tcctgctgtg cggcgctgta ttatatcgcg tttttaacta taaattataa aaaaaggccc
    16201 taacctgccg ctttgtataa taaaaaagcc cggagggttt ctccgggcct tgcattgatt
    16261 aattgattta aatcagatta atccagccat tcggtatgga acacaccgtc tttatcaatg
    16321 cgtttataag tatgcgcacc gaaatagtca cgctgtgcct ggatcaggtt cgcaggcaga
    16381 acagcggcac ggtagctatc ataataggca acagcagcgg cgaaggtcgg aaccgggata
    16441 ccgttctgta ctgcgtaagc gacgacatcg cgcagcgcct gctggtagtc atcggcgatt
    16501 tgcttgaagt acggggccag cagcaggtta gcgatctgcg gattttcggc atatgcatcg
    16561 gtgattttct gcaggaactg cgcacggatg atgcagccag cacggaaaat cttcgcgatt
    16621 tcgccgtagt tcagatccca gttgtactct tcagacgccg cacgcagttg agagaacccc
    16681 tgagcgtaag aaacgatttt gcccagatac agtgcacggc gaactttttc gatgaactca
    16741 gccttgttgc cagctggctg cgcttgtggg ccagagagaa ctttagacgc agcaacgcgc
    16801 tgatctttca gagaagagat gtatcgtgca aacacagact cggtaatcag cgacagcggt
    16861 tcgccgagat ccagtgcgct ctggctggtc catttgcccg tacctttgtt tgccgcttca
    16921 tccaggatca catcaaccag gtagttaccg tcttcatctt ttttagtgaa gatgtctttg
    16981 gtgatatcga tcagatagct gctcagttca ccgttattcc actcggtaaa ggtctgcgcc
    17041 aactcttcgt tggaaaggtt caggccgcct ttaagtagag aataggcttc agcaatcagt
    17101 tgcatatcac cgtattcaat accgttgtga accatcttca catagtgacc tgcaccatcg
    17161 gcaccaatat aggtaacgca tggctcaccg tcttcagcca ctgcggcgat tttggtcagg
    17221 atcggtgcaa ccagttcata ggcttctttc tgtccgccag gcataatgga aggacctttc
    17281 agcgcacctt cttcaccgcc ggaaacaccg gtaccaatga agttaaagcc ttctgcagaa
    17341 agctcacgat tacgacgaat ggtgtcctgg aagaaggtat taccaccatc aatgatgatg
    17401 tcacctttat cgaggtatgg cttgagggaa tcaatagcag catccgtgcc tgcacctgct
    17461 ttcaccatta acaggatgcg acgaggcgtt tccagagatt caacaaactc tttcaccgta
    17521 tagtaaggaa ccagtttctt gcctggattt tcggcaatca cttcttccgt cttctcacgg
    17581 gaacggttga aaatagagac ggtataacca cggctttcga tgttgagcgc aaggttgcgc
    17641 cccatcactg ccataccgac gacgccgatc tgttgctttg acattgttta ctcctgttag
    17701 ggggttacta cattaaatat ttaattaata atattaataa cgccaaaaca acttaatcat
    17761 gtaatatttt atttacacaa ttcagtgctg aacggataac ttggtgcata tcataatact
    17821 tatattcagc aaggcgtcct ccgaaaatta ctttactctc catttgcgaa agctctctat
    17881 atttatgata tatatccata ttttttttat cattaatggg ataataaggc tcttgaccct
    17941 cactccactc tattgggtac tcttcagtta taaaggtata ttcagtttca taagagtcat
    18001 caaaatgctt atgctcaatt atcctagtaa aaggaatatc tttttcagta taattaatta
    18061 cggcattgcc ttgataatta gcctcctcaa ttttttttgt tataaacttt aaggatctat
    18121 attctaaagt tcccaacttt ttatcaaaat aagcatctat aggcccagta tatataatcc
    18181 gttccgccat agaattatac ttatcctttt ctgataaata gtcaacatta agcagaagat
    18241 caacaccatt aagcatctta tcaattattt gtgtgtatcc tccgatagga accccctgaa
    18301 atctatcggt gaaataatta ttatcgaaag tgaatcgaac tgggattctt tttataataa
    18361 aaggcggtaa ttcagaacat gaacgtcccc attgtttttc cgtatacccc ttaattagtt
    18421 tttcataaac atcttcccct accagggaaa gagcttgttc ttctaaattt gtgggagtta
    18481 tgttagaata tttacttctt tgtaaatcta ttttatcttg agcttcagaa ggagtttttg
    18541 tcccccataa ctgataaaag gtattcatat tgaaaggtaa gttatataat ttacctttat
    18601 gatatgctaa tggagaatta gtgaatctat taaaagaagc gaatttattt atataattcc
    18661 agatatattg atcgtttgta tgaaatatat gagcaccata cttatgtatg tgaatatcgt
    18721 caactttttc agtatagata ttccctccaa tatgatccct tttctcaatg accaacacac
    18781 gtttatttct tttatttaat tcataagcgc aaaccgcacc aaataaacct gaacctataa
    18841 ttatgaattc atattgcatt gcggttccta tgtcatctaa cttagttaaa attaaagttc
    18901 tttaagtaag caacctttca tatctttatc tgataatata ggattactta aaggccattg
    18961 aatattgagt tctggatcat tccataataa acaacactca tcctcaggat cataatattc
    19021 tgtgcattta tattcaaaat cggccatttc agataataca acaaaaccat gtgcgaaacc
    19081 tggtggtacc caaaattgtt ttttattcat ttcagaaagt aacacaccaa tccattggcc
    19141 ataattaggt gattcttttc taatatcgac ggcaacatca aaaacttcgc cgcgcacaac
    19201 tcttacaagt ttaccttgtg gcttcgtttt ttggaaatgt aatcctctta aaacattttt
    19261 gcttgatcgt gaatagttat cttgtacgaa atcaaattct atatttaata aattttgata
    19321 acgttgtttt tgatatactt ctaaaaaaaa acccctgttg tcaccatata cgaccggttc
    19381 aataatttta actccatcca gaacagtgtc ttgaactttc atatttatta taacctttag
    19441 tgatttctat ttaaaacgtc attaattgta ttagtatact tctctatgat cttattttca
    19501 tcacaatgtg attcagcaaa ttctctcgac ttaatagaca ttgtgttttt catttcgtct
    19561 gtcagtagaa tatacttttc aataatgtca actaagctat caagatcatt aggttgacac
    19621 aaaaaaccat taacttcatt ttgcaccata tccctacagc caacattatc tgttgtcaaa
    19681 atagctaacc cactagaagc accttcaatc aacgctttag gtacaccttc tctataaaat
    19741 gatggtaata ctattgcatc ataatgcttc attatactag caacgtcatc ggaagtccca
    19801 tagtaattaa ctatacccct cgtacaaaaa ccttcaatca attccttcgt gattatcttt
    19861 tcattttttt caaatgcacc taacagtgaa aatgaacaat taggatattt ggattttatt
    19921 atttctgcgg ccttaagata gtgaagtatg cctttggtat atagaagtct agcaacaagt
    19981 atgaatttca cacatgatct ttgctttaaa ttcttatttg agggaagaaa ttttgataaa
    20041 tcaacaccag acccaaatat tcggcatgtt ttctcataat tgacgcagcc agaattaatc
    20101 aataactgac gatcatcctc gttttgaaaa aaaacgaatg ctgctttctt taatgctatc
    20161 ttatataata gcttaacaat ttgacttaat atcgtattac tattaacaaa tgcacttcca
    20221 aggccagaaa tattaggtat cactttcgcg tcaaatttat aagcaagcaa accacaatat
    20281 atattagctt tgggtgtaaa cgttaatata acctgtggat tgaatttttt tataatttta
    20341 taatatgata ttagagatgt acattcagta aaaatattaa tagattttgg tttaagatca
    20401 accttctcaa atttagcgcc gaattttaaa atagaatcct tatattcata atccggtaca
    20461 accactaata catcaaaccc tatattaata agtgccttaa ttgtgcttcg tctaaaatta
    20521 tatatatacc aactactatt agcagttaaa actattttta aggaatgatt atcccttaaa
    20581 tgatcctttt cgtccaagca gtccatcttt tatcccctta aaaatataat ttaatcgttg
    20641 tcctccacgt tcacaaaaag cgtaaataat gattcggaca ggcattgtta tcaatttttt
    20701 taacttatat cttaaaggaa atacaggctc tctcagagct aataaccaat ttctataaac
    20761 ataatacaaa cgaaatggac tgcaaactgt aaatgtttta atccccataa tatttatatc
    20821 tttagatcct atattgtgag aaataaggac tttatctgtc actaggatat tccagccttc
    20881 tttcctagct ctgaaactcc attctatgtc aattaaatcg ataaaccaag atactttatt
    20941 taatccaata ttgataattg cctctagggg tatgagtgca ccagaagata ttatactttc
    21001 aacatcatgt atcgtttcac ttatctggga gcccagcttt atttcacgat catacttttt
    21061 cccattacgt tcatttatta ttgttggacc taatgcagca atattactcc ggagagagca
    21121 agcgtactca tactctttta acattgatga tatataatct tttgatatac atgaatcttg
    21181 atcaaatgta aagaataagg actttcctaa tccgatagct ttaatgaaac catagttctg
    21241 cgcaaacgca atgcctttgt tatctcctaa atgatagtaa tgaatgttgt tattacacaa
    21301 aacatcactt tctaagtgga gctcaggtgt attgtcaaca agtaatattt cgcactgttt
    21361 ttttcccagt gagtcaatca ttttattgat tttactaaca tcaggataat atagtacaat
    21421 tatcaccgct actctattca ttttttattc cacttataag atccatgatg agtccttttt
    21481 acaaaatttt tatcggatac tttaaaggtt atgtatcgat aaaacaaaaa atatcccgac
    21541 aataatacaa tcttccagtc ctgatatata tatgcataca caatagcagc atcaaaaaag
    21601 aaaaagtaat atttaaccct aaataaatca gggtaaataa taaaatcctt taacctttta
    21661 ataccatatt tctccttaca ggcgtgttct aatgttctga ttaaagggaa taataataat
    21721 atgataaaaa caaaaaatac actgcatgtg acagtgggta tcaaaggaat aatgtaacga
    21781 catgacacca aagaaaaata agtgattata tttctcttat cccggattgt attatgcaaa
    21841 taaaaggaga taattaaaaa ccctatacat aatacaaaat agataacagt atagtgatga
    21901 gcaatgatat cactttgata aattaataac gcgaatgata caaaaaaata aacaactcta
    21961 atgaaaatta tacttgataa tttactttta attgtatcac gcagctctcc acctcttatt
    22021 gttggtgctt tttctgtatt tattgttcta tagtcattgt ctaagtagcc tatttcataa
    22081 atggacatgg tcatcataaa tgacagaagc aaagatacaa aactaccatt atacaaaaaa
    22141 caacacagca atagaaaccc tggatatata ataaaccagc taattttttc atgccatgtt
    22201 ttcaatcttg aaatgaataa atatgataat gggaaataca atatcacata aacctcactt
    22261 tatctttgga gacaccaaat ctatttaata gtactctcca tttattttta tctttggctt
    22321 ttgaaataat cactgctgta tctgcaagtt taataagatt aatatcactg aaattatcag
    22381 tgacaatcaa acttacaggg ttattaactt gtaaatgctt tataccagta agattatatt
    22441 ctaataaccc tgttgattta ttgtcgataa attctaattt agatgatact gcctcaacat
    22501 tcaaattttt agcaattaca tttatgacag gatcaacgga agcagacatt aaaatgatct
    22561 tctcatgttt atatcgttct aaaagtgcca taacttcatt cttttcttta aaaatgagaa
    22621 attcatcata aaacaaattc gccaactctt ccaaagtaga cttttcatat ccttctaatg
    22681 tcttcaaaaa atgttttcgt aaggaacata tacgcaattt atgtagcaac tttccaaata
    22741 aggagcgtaa taataagcat ttaattaact tggtatattt tttttgtttc ctatgtacaa
    22801 atacaacata atcaaaagtt gtattcgaca aataaagagt gccacataca tcaaatacaa
    22861 caatatgttc gagcatgtta aactcccttc aaagttagag ttaatcttga gcaaaaacat
    22921 atcacataaa gcattgcaat tgcataaata tagaacatca acatatataa ttggtcaaaa
    22981 aattgaaata acaaggggaa gtacaaaata gagcaaatga caactgatat cgttttctta
    23041 tttttttttg ctacattgta caaagatgaa tgaaagaaac ctatgacaaa aaagaaaatt
    23101 aatgagtaca aaaaatcaga atattttgtt agcgaataaa atattgtaaa aacatttgtc
    23161 ttatactctt tatatgatat aaaattagct aatccacatg tagcatctcc attacaatct
    23221 ataactactg ctttaccttg caaaaccgaa tctaatgcaa aaatgtttgc caagctatag
    23281 ttcatcaatc catattttaa cgcttcgaat gctcctgaag agtcgtcaat tttatttaaa
    23341 aacaacatag ataaatagaa aaaaaatata ataccagaca ctgtgacaag taaatatttt
    23401 aaagatattt ttgaaaaaaa taatcgcaaa aacactattg gtataattag taataaaact
    23461 ttaattttag ctgttgataa taacgcataa aaaagtgaag taaaaaaaac aaaataaaat
    23521 gttcgattat tatatggtaa ccgggcccgc tctccttctt caatcttttt atatttattt
    23581 ttaaaatata aaaagctcca tacatatacc aatgggtata aaagatagta tatataccca
    23641 tatattttta ttaatcccga tttatctccg taattaattt ctgtacgtga atttatatag
    23701 gattcagtga agcccccctt ataataatat aaaaaaacta ttaaagtata gattaaaata
    23761 acaaacgaga taatatttgt aattaatact aacgcttttg tattgtttat attataggaa
    23821 aatacatgtt caaatatagg agcgtaaggt tttgccagta gagcccctac cgaaaaagat
    23881 aaacatgaaa ataaaattat acataatgta tagttagtta tgtctccatt tactcccgac
    23941 aaaaataaca gcccccccca gataaagaat agaatcgccg acggcgattt aatatcttta
    24001 ttaatactca gtaataatcc tgaatacata agcattatta tagctataaa aatggtcatg
    24061 ttcatttaag cttagctcta agttgagaaa ttaattgagc tcctcttcca ctgcattcat
    24121 cagtgttaat tacaaattcc tcaccgactt taaaaacttc tttattttta ttaatccata
    24181 cattcagaag tcgctcagca ataaagccga acacacgtga ttgatattca tcgtatctgc
    24241 ataaatttat ttctttctcc agctcatcta atatggaaaa caaccaatca caataacaat
    24301 caaaaatccc agccttcatt ataaacatat tataaagcga tatttttttt tgttctaaaa
    24361 gttctctgaa tgcaacacta taatcaggat ataatttatc aactattttt tttgccaaca
    24421 ttagatcttc gacattatgg aatttcctgt agtgttcaac aacagatagc ttcaaactct
    24481 ctttcaccgg aataattata tcatattgtt tcattttatt agaaatatta gctctgtcat
    24541 atatcctcac ctctttaaat ttaaaattcg ataaaacatt tccaaaatac ctcctataat
    24601 gaaccaagcc aatataatca tcattaaaaa gtttattttt ccaaagccaa tatataacgg
    24661 tcagctcaca ataattttta tttttacatg atatattatt ccctgtatca tctcccaaca
    24721 cttgatcaag cattttccct gatattttct tacccgcatg aatagggata tagcactcat
    24781 gattaggtaa ttcagtttgt ttatggcaag caatgaataa agccattaat attcctcttt
    24841 atttaaacaa atttattttc tttcttttta agaaaagata catcaatgat gcaactacgg
    24901 tttctgtaat taaaaccgtc atcgcagccc catacgcccc ggcaaaaaag atcaaaggag
    24961 caatgattat cacatgcata acaccacaaa ttagcagtat tttactaaat tgtcttttat
    25021 aaccatgtgt cagcatggtt tgaatgccaa aaaaattact aagagaaata ataaatggca
    25081 aaaaggctaa tattcttaaa atactaattg actcagtata tttatctccg actccatatc
    25141 ttattattat tggagaaagt atgcacagga gtaatgaacc tgaaaacgaa atgaataata
    25201 cgcccttaaa tgattttttc agaagattca tactttttgc ataattttct tcaaacaatg
    25261 aattaattct tggataaaca gcttgataaa taggattcat tagactctgg gctgcatttc
    25321 taattgtatt agcagcgtta aagtagccaa cagagacagg tccacatata aacccaagaa
    25381 caacaacagt tgttgttgta tataagctaa tagcagctgt tgaaatgaaa atatgccatc
    25441 cgctttttaa tgaataaatt ataccatcat aatcaaatac caatttccca atccagttat
    25501 tatttataat aatagcaaat ccaattaaac ctgctataaa attaacgccg ccttgaatca
    25561 aagcggctaa ccagatatct tgtggatttt ttactaacaa aaaagttaat ggtattaata
    25621 ataatcttgc acttaaacta cataatgtaa tccatttcat tttttctaat ccctggaaaa
    25681 accaaacagg gtataatata ttacctaaca ccattggaat aaatgatatt aacaccactt
    25741 gagcataata tagctcctta ataaaaaatg ttattccgaa aaatataaca attgccgaaa
    25801 gtgcaagtat aatcttacta aagaagacat tccaaaatat tgttgttaat ttttccttgt
    25861 cattcttact tttcgaaaca tcttgtgttg ctgaccaatt aaacccataa tcagtcacca
    25921 tcacaagata ttgcattgtt gcttgacaaa accctaatag accaaaagag tatggtccta
    25981 atactctaac aagataagga aatgttaaca atggcagtat aaaataactt ccttgcaata
    26041 tagctaaata gaagatattt ttattaagag aggtaacaag cttcaatgca atctccgagc
    26101 ctatttatat agctgcaact agttaatatt atgatatttt attatttatg atatttagca
    26161 gatactgacc ataagcattt tttttcagtg gttcagctaa tattttcacc tgctcagaat
    26221 caataaaccc tttacggtaa gcaatttctt ccgggcagga aactttcaac ccctgacgtt
    26281 cttcaattgt agcaatgaag ttgcttgcct caatcaggct ttgatgtgtc cccgtgtcca
    26341 gccacgcata accacgcccc atcatggcaa cggataaacg cccctgttcc atataaatac
    26401 ggttaatatc ggtaatttcc agttcaccac gggcagaagg cttaaggttt ttcgccattt
    26461 cgacaacgtc gttatcatag aaataaagcc cggttaccgc ataattactt tttggttgta
    26521 gcggtttttc ttccaggctt attgccgtac cgtttttatc aaactcaacg acaccgtagc
    26581 gttcaggatc attaacgtga taggcaaata ccgttgcacc actttctttg tcaacagcgg
    26641 tatccattaa cttcggcaga tcgtggccgt agaagatatt atcaccaaga accaaagcac
    26701 aatcatcacc accgataaac tcttcaccga taataaacgc ctgcgcaagc ccatctggag
    26761 tcggttgcac tttgtactga agatttagcc cccactggct accgtcaccc agcagttgtt
    26821 gaaaacgagg agtatcctgt ggcgtactaa taatcagaat atcgcgaata cccgccaaca
    26881 tcagtgtaga gagcgggtaa tagatcatcg gcttatcata aataggtaat agctgtttac
    26941 tgacagccat agtcacagga taaagacgtg taccagaacc acccgctaaa ataatacctt
    27001 tacgcgtttt catttcatca ttccttttaa ttcatcttgc tccatcatca cgaacaagat
    27061 gcaaaaacta ttaaattgct gtagtcgtaa ataattcgtt gagcattcgt ttcacgccaa
    27121 cctgccagtc aggcaaaaca agcgcaaagt tctgctgaaa tttttctgta ttaaggcgag
    27181 agttatgtgg acgacgagct ggtgtaggat aggctgttgc tggtactgcg ttgagcttgt
    27241 tgagtgcaag gggaatacct gctttgcgcg cctcttcaaa aaccagcgca gcataatcgt
    27301 gccaggttgt ggtaccactg gctaccagat ggtacatgcc tgcgacttct ggtttattca
    27361 gtgccacacg aatagcatgt gccgtacaat ctgccagcag ctcagcacct gttggcgcac
    27421 caaattgatc attaatcaca gccagttctt cgcgctcttt tgccagacgc aacatcgttt
    27481 tggcgaagtt atttccttta cctgcgtata cccagctggt acggaaaata agatgcttcg
    27541 cgcaatgttc ctgtaacgct ttttctccgg ctaacttggt ttcaccgtaa acatttagcg
    27601 gtgcggttgc atccgtctcc agccatggta tttcaccggt tcccggaaat acgtagtcag
    27661 ttgagtaatg aattacccag gccccaactt cattagccgc tttggcaatt gattcaacgc
    27721 tggtcgcatt gagtaattgt gcaaattcgg gttctgactc agccttatct actgcggtat
    27781 gagccgcagc attaacaatt acatcagggc gaattttttt gacggtttca gccacacctt
    27841 caggattact aaaatcacca caataatcag tggagtgaac atcaagagca atcaaattac
    27901 ccaaaggtgc gagagcacgc tgtagttccc aacctacctg ccctgttttg ccgaaaagga
    27961 gaatattcat tactggcggc cctcatagtt ctgttcaatc cacgattgat aagcaccact
    28021 tttcacattc tcgacccatt ttgcattagc caggtaccat tccactgttt tacgaatccc
    28081 gctctcaaac gtttcctgcg gtttccagcc caattcgcgg ctaatcttct ctgcatcaat
    28141 cgcataacgg cgatcgtgtc ccgggcgatc ggcaacataa gtaatttgct cacggtaaga
    28201 tttctctttc ggtacaatct catccaacaa atcacaaata gtgagcacta catcgatgtt
    28261 tttcttttcg ttgtgtccac caatgttata agtttcaccc gctttacctt cggttacgac
    28321 gatatataac gcacgcgcat gatcttcaac atacagccag tcacgaattt gatccccttt
    28381 gccataaata ggtaatgcct taccttccag agcattaaga attactagtg gaatcaattt
    28441 ttccggaaag tgataaggac cgtagttatt cgaacagtta gtcacaatgg tcggtaaacc
    28501 ataggtacgt ttccacgcac ggactaaatg atcgctggat gcttttgatg cggaataagg
    28561 actactaggc gcgtaagctg tcgtctcagt aaagaggggt aattgttctt tattatttac
    28621 ttcgtcagga tgaggcaaat caccatagac ttcgtcagta gaaatatgat gaaaacggaa
    28681 gctatttttc ttgtcgccat caagagcaga ccagtaattg cgagccgctt ccaaaaggac
    28741 ataagtacca acaatattgg tttcaataaa tgccgcaggg cctgtaattg aacgatccac
    28801 atggctttca gcagccaggt gcatcactgc atccggctga tgctgagcaa aaatccgcgc
    28861 cattgcagca gcatcgcaaa tatcagcatg ttcaaaaaca tagcgttcag agtcagaaac
    28921 atcagcaagt gattccaggt ttccggcgta cgttaattta tcgacattaa caacactatc
    28981 ctgcgtatta tttataatgt gacgaactac agcagaacca ataaatcctg cgccaccagt
    29041 aacaagtatc ttcactttat tattccatat tacttcagag catgctgtga aataagcggc
    29101 tctcagtttg attaatagag gtattaatgc acgctaccgc ccctggcttt acagctacca
    29161 gagcactgca tgcatgtcta cgatgtgacg agcgttaccc actcgcgcta aacccgaaaa
    29221 attcaaacgc taattgtctt accaatccgc tctggaaaca aggaaaatcc tggaaaactt
    29281 tgactaaaat cctattgcta actcgttgtt atcctgattg tttatataaa acaacggcag
    29341 gaatattcgc aacaaattac tttcgccacg aatcttcact gccgttataa ttttcttatc
    29401 aaccgttaca tccggtcaga ttttcattat tcgcttaaca acttctcaat ccctttacgg
    29461 aacttcgccc cttctttcag gttgcgtagt ccatacttca cgaacgcttg catatagccc
    29521 atttttttac cgcagtcgta gctgtcacct gtcatcagca tggcatcaac ggactgtttt
    29581 ttcgccagtt cagcaatggc atcagtcagc tgaatacgtc cccatgcacc aggctgagta
    29641 cgttccagtt ccggccaaat atcggcagaa agcacatagc gaccaacggc catgatgtct
    29701 gagtccagcg tctgcggctg atccggtttt tcgataaatt cgacgatgcg gctgacttta
    29761 ccttcgcgat ccagtggttc tttggtctgg atgaccgagt attcagagag gtcacccggc
    29821 atacgttttg ccagcacctg actgcggccc gtttcattga aacgtgcaat catggcagca
    29881 aggttgtaac gcagcgggtc ggcgctggcg tcgtcgatca caacgtctgg cagcaccacg
    29941 acaaatggat tgtcaccaat ggcaggtcgt gcacataaaa tggagtggcc caaacctaaa
    30001 ggttcgccct gacgcacgtt cataatggtc acgcccggcg gacagatgga ctgcacttcc
    30061 gcaagcagtt gacgctttac gcgctgttca aggagagatt ctaattcata agaggtgtcg
    30121 aagtggtttt cgaccgcgtt cttggacgcg tgagttacca ggaggatttc tttgatccct
    30181 gcagccacaa tctcgtcaac aatgtactga atcattggct tgtcgacgat cggtagcatc
    30241 tctttgggaa tcgccttagt ggcaggcaac atatgcatcc caagacccgc tacaggaata
    30301 actgctttta aattcgtcat tatttcatcc acctgtaaaa tggttgctga attatagctt
    30361 gttcgatttt tttcgccagc atcaattacc ctgaattgat tactgaatta cttgtgatgt
    30421 tacgccgctt cgttgtggat tgcagtagca ttgttcctaa gtatggctcc atttttccag
    30481 gaatggtcgc aaatctactc cccccgttcc ggcaatctaa agttaatctt ttccacatta
    30541 acaatatggt gattaatcct gtcgatatcg acggagcttt gccctctttc attcaccgca
    30601 tgaacatttg caagagatag tagtgtttct tttttcgcca taaagacgcc gcgaacgtct
    30661 ttgcgcatgt cgaagttcat gctcaatgct ggtccaacag aggattcctg catcacatta
    30721 atattacgca taaaaaggtg ttgtggtttg ttgtgtaact ccagcgacgc acgcttcatc
    30781 tcaatgttag tcagcgccac acaggagaca gcattcccgg cggagatttg gatgccgcgc
    30841 aatttataag caagatgggt gttatctagt tgaatattat tcactcggaa attttgcggt
    30901 atcgagagat atttgccttt aattacccca tagccgatta acatcccggc gctattaatc
    30961 atttcaatat tatcaatcac gaaattgtca caaccgtaaa tagcaactgt cgcgttatca
    31021 atacctgctt tcttactgaa atccggcgtg atattgcggg ctttgatatt acgaataaca
    31081 aaatgtttac cattttcaac atggatcagt tgccgacaat ccgatcccgt gatattcgcc
    31141 acgacaaagt ttttcactgc ctggtcttcc ggataattat tatcgtaggt acttcccgca
    31201 agacctatgc cgatgcccca gttgattttg ccgttggtac agttgatgcg ctcaataacg
    31261 tggtcagata tcaaaatatc actgtcgtta atcgccacgt tccattcaat ggcatcgccc
    31321 tgtaagtcgc tgaacttaca attggtgatg ttggcaccga taatctggtt atgaaatccc
    31381 tggcgtaaga tggcgtaatt agcgtggcta acggtcaggt tatcgatggt caggttgcgc
    31441 atgacctgtt tgtttttgcc gccgatataa atctgcgtta ccgggccaaa gccgctcata
    31501 gtcagccctt tgatggtgca gtcggaacca cgcacatcca gggtgatgtt atgcatactg
    31561 ccgccctcct cccctgtcac ctggctgccg tcctgtaaaa caaatcgccc tctgccgttg
    31621 ccgcgcaggc ttccaaggat gtgtaacgtt ttacctgcag gaatgaagat gccggtgttg
    31681 atattgtcgc aaaccaatcc gccaggcacg acgaccgttt gcccttcgct gaaggcttgt
    31741 ttaaatgagg cgatccagtc gtgagggttg tagtcgttaa tgttaacgct ttgtcgggcg
    31801 ggaagtgcgc gagcgaaagg ggtatggagg aaggcaagcg ccgagcttgc cgtcaggaag
    31861 gtgcgtcggg agagtttttt aaatggcatg cgttctcctc tataaagcct gcaacaagct
    31921 ggcgagttct cgattaatca cctgctggtt aaaatcgtgt tcgacttttt cgcgcgcacg
    31981 tttgacaacc gtagtaagtt cgtcggtgtc cagttggcta aacgccgcca gtcgttgcgc
    32041 cagtgcgcga gcatcgttct caggcaccag ccagccggat ttatcggcct ccaccagttc
    32101 cggtattccg ctatgcagag tagaaaccac cggaatgccg accgccatcg cttccatcag
    32161 cgccaccgga atgccttcca tatcgccgtc agcacccgtt accgatggca acagaaagac
    32221 atccgcatcg tcgagcatcg ccttcacttc gtggcttggt ttaaagcccg gcatctctac
    32281 cacatcctcc agttgatatt gttcgatgag cgtgcgcagg cgtcgttccc acgggccaat
    32341 gccgaggatg cgataacgaa atgccacgcc ctgctctttc aactgccggc aggcttcgat
    32401 cgccacatgc aggccttttt tctcggttaa gcgtgcgaca gatatgattt ccagcggcgt
    32461 tgcaggcgct tttaccggac gcgggctaaa gcgcgtcatg tctacaccca tgcgcgatac
    32521 ggcaattttt tccctcgggc agcccatttt ttgcagcctt ccggcccaca gttcgcttat
    32581 cggtagcatc aaatcgccac gacgaaacag ttgttgatat tcgggagtgt aatggttgag
    32641 cacttcccga ctggagatat caataccgtg gaagatagtg gcaattttgc cgcgaatgac
    32701 atccagttcg cgtagttttg ctgcggttac ccccgcaggg ccaaaatgag cgataaaaac
    32761 atcagcatga aacggtgttg cgacctggcc gcaaatggca gacaaaatca ggttccgcga
    32821 ctcagcacca tagcgtttga ggttgagcgc ctgccaggta tttttacgat gaatgccgcg
    32881 taaggtctgg ctggcgcggt agcgcagttt cgccactttg ccttgtggtt cgtcctgtaa
    32941 ccagcgagtt ctggcggcaa ggttatattt cgtccatgcc gcgtgggtgt tttgcgtatc
    33001 gcctttttgc agcgcgacaa tctccacctc aaagcccata tcaataaacg cagtgatttg
    33061 gttgagaacg aaggtttccg acgacagcgg aaatttcaat aagaagaagc cgaccttcat
    33121 ttcgcctccc cgatgcgctc aagcacagac tgcaccatcc gcattcccgt ctgacgctca
    33181 cgactgacgg cttcgttaag tcgcgcgttc agcgccggaa gttggcctaa ggtatccgca
    33241 accatcgctt gcaggctgcc gtccagtaaa tggcgaatat caatcgccat ctctggcagc
    33301 cccagttgtt gcataatccc ggcggatttg tgttcgtagt tgatggcaat tgccggagtg
    33361 gagaaattca tcgagataat ggcagagtgc aggcgcgtac ctacggtgag ttcacaggca
    33421 ccgaggattt tgcccatttc cagatcgttg agctcatcca tcaccacgtg ataacgggca
    33481 ggatcgctga tgtgctgacg caggttgagc gccaccatgc ggtcgtcttt gttatagctg
    33541 tcgatacccg tacaggtgga gagcgcaatc acctgatagc cttcgtcgag aatgcgattg
    33601 accaccccgg caaaggcttt ttcatacgct tcttgagtgg tgccgagacg tttgtcgaac
    33661 ggtgccagtt cgcgcagggt aattgccacc gctttctgtt gtgcggcaac atccagccag
    33721 tgttgaacag catagctggc ggtgaagtct tcaatgtggt gatcgaccag ccacgcggta
    33781 tcgacgccat tttcaacttt tgcggtagtg atattgctgc gtttcattag atccaggctg
    33841 accgattcgc gcaggatcag cgcgtcgcag tgaccgaata cgtagttcgc cagttggtta
    33901 aattgctcat cctggaacgg gccgacgctg tgaccaatca taaacagcgg ctttttcgcc
    33961 ataaacgtgc aaagcgcatg ttcaaactgc ggcacgccgt agagatcgac aaaaaacgat
    34021 ccgccgacct ggataatggc atcgtaacct gacagcaggc gcacaaagtc agtgaatccc
    34081 tgggcaatgg cgatattacg cagcttgccg gtgtcggtga cgcgtgagag caatacctgg
    34141 tgctggtagc ggcgacggag gacttttttt acgcgcccga caacgcccgc cgcgctgttg
    34201 tgttgtttca tttgcaggaa cagcggatcg cccattaccg gacggttgag cagccaggaa
    34261 gaactgaccg gatagcggct cattacgtcc acttcggcgt gtggattgag gatgttgatg
    34321 gcatcaagta agccgcgcaa gatggcgctg tcgccgcgat tgccgcaagt gtggttgccc
    34381 agaatcagta atttcatttt ttcctcataa atttgatgcc aagtgaggct gtgttttttg
    34441 tgttcgttgc cgctttttgc ctggcgcgtc ttatcaggcc tacaagtccc gagcacagag
    34501 ccgtaggccg gataaggcgt tcacgccgca tccggcaact attgccggaa ccgaaaacaa
    34561 ccattcaccc ggcccgcaaa agcattttca ttttttcgct gcgacaaaac tgacgcttca
    34621 cttccaccac cagcggatgg cgcgacaaca cgatcatcac cacaaacgcc agcacgcctg
    34681 cgataatttg caccgccagc agcatcccca gcgccagttg ccctttcagc acaatgccca
    34741 gcgcataact gaccaccagc gtcggcaacg agagataaaa cggcagccac aaactcagga
    34801 tgtactggcg ataactggaa ccaagaaccg gtttaatcat cacgaagtaa ctcagaatgg
    34861 tgttgataat ttgcaccagc aggaagccaa gcgtgacgcc gatcgcgccc gccatctgcc
    34921 caccaataac aatcgccgga ataaacagaa atgttttgaa tacgttgaat ttaaagctga
    34981 tatcgacccg cgctttcgcc atcagcagcg aaccaatcgg gttacccacg gagcgcagca
    35041 gacccacaat acacagcaat tgcagcaccg gaataatgct gttccacttt tcgccgaata
    35101 ccagcggtac gaagttattc gacaccacca tcagcccgag cagcgccgga aagttgataa
    35161 tccccaccac cgacagcagc ttgtagaagt tcacgcgcag cttttcggtg tcgtcctgaa
    35221 ttttggcaaa cgccggaaac aacacacggg tgatgattgg gttcagcttc atcggcggca
    35281 caacggccac gttgtacgcc aggttgtatc cccctgccac gcccgcgcca agaatacgcg
    35341 ccagcaccag cgttgaaagg ttggtgttga gatagttgat gatgctgtcc gccgtcagcc
    35401 aggcaccaaa acgtaagttc ggcgcaactg acgccagcga gaaatgcaga ccggggcgat
    35461 aaatttttcg accaaagtag ccaaacagca gcgttcttac cgcactattg accagataac
    35521 cgaggatcgc ggtcatcgcc agcggccaga aatgggcgct aaccaccgta aaagtgaagc
    35581 ccgccagcac cgcgctggtt tcgatcatgc cgattttgtt gaactccagt tccttttgca
    35641 tcaacgcgcg gaactgttgc ccgtggggga tcaccacaaa cgccagcgac aatgttttaa
    35701 tcaacggtgc caggtccggg ttattcagca cgtcaccaat ggcatcactc aacaaaaaca
    35761 ccgccacaca caccacgatc cccagcccga cgttcagcca gtacagcgtg gtgagttcca
    35821 ggtggctgat ttcttttcgc tgaataatcg agttagcgat accgaagtca gaaagcgtat
    35881 ctgccagcgc gatgatcacc agcgacacgg taagcaaacc gaactggtgg ttgtcgataa
    35941 tccgcgccag cacggtcatc tgcaccagcc cgaggccgat gatgatcacc gtagcaatcg
    36001 ccgaccactt tgcgccgctg atggtctttt cacgtaagct catatcaata tgccgctttg
    36061 ttaacgaagc ccttgaatac cgtcaggaaa acgattttga tatcgaacca gacgctccat
    36121 tcgcggatgt actcaaggtc gaactcgacg cgtttttcca ttttctccag cgtgtcggtt
    36181 tcgccacgcc agccattaat ctgcgcccag ccggtaatgc ccggtttcac cttatggcgc
    36241 agcatgtagc cttcaatgag ctggcgatac tgttcgttat gcgccaccgc gtgtggacgt
    36301 ggaccgacaa tcgacatccc cccggtcagc acattgataa actgcggcaa ttcatccagc
    36361 gaggtgcggc gcagaaagtt ccccactttg gtgacgcgcg gatcgttctg cgtcgcctgg
    36421 gtcaccactt tgtcgttctc catcactttc atggaacgaa acttccacac tttgatcggc
    36481 ttgccatcca tgccatagcg agtctggcgg aaaataaccg gccctggtga actgagtttc
    36541 accgccagcg caatacagca cagcaccggg gagatcagca acagaataag cgtcgccagc
    36601 acaatgtctt ccgcacgttt gagcaggcgg ttaaccccgg aaagcggcgt gtcgtaaagc
    36661 ggcaccaccg gaacgccgtt catctcttcg agacgtgaat ggagaatgtt gaaggtaaag
    36721 acatcgggga tcagcagcac cgaacaggtg gtatccgcca gttgatggac cagttttttc
    36781 actcgcgcgc cgtcgcacat ctgcatcgcg atatagacgt tatgaatttt gcccgctttc
    36841 gcatcctcga ccagctgttg cagattgccc gcccagtcgt tagaaacgcc gcccggtttc
    36901 gggtcgtggt aaacccccac cacttcaaac cctaaccacg gctgattacg gaagctctcc
    36961 atcagcattt gtccggcggc taaatctccc gctacggcga ccatacgctt gttatagcca
    37021 tgattacgca gccagcccgc cccaatgcga atacatgaac ggcaaaccac cagtccgata
    37081 ctggtcagcc cataccacgc cagccagatt ttcagttgcg tgtcgaaatc attgttgaac
    37141 gccaccagtc cggcgctgaa aatcacgctt aaggtccagt tttgtagcaa cagggcaaat
    37201 tctgtcgctg cccgaacacc gcgccatgag cgataaaaat cggtgatgcc gcccagcatc
    37261 tggaacacca ccagcgtaat caacgccacc aacaggtgca tgtagaggaa tgacagtccg
    37321 ctcacttcgc aaaccagcca tagtccggca aacatgatgg tgatatctga aaagcgttgc
    37381 accatagaga ttaacgatgc attggttttc gctcgctcgc gcttttttag atttgtcatc
    37441 gttgttcctg ttattagccc cttacccgca gtggggtaag ggaagatccg acattactca
    37501 ttcagcaacg tcagcagagt tcgcgttcgc gcttccatca gcggcacatc accgcgcgat
    37561 tccacattca accgcaccac cggttcggtg ttggaggtgc gcaggttaaa gcgccagtcg
    37621 gcaaaggtca tgctgatgcc atcggtacga tccaccgaca gcgcctcacg gctaaaatgc
    37681 tgttcgacgc gattaatcgc ctcaacgggt tgcgccagtt tgctgttgat ctcaccgctt
    37741 gccggaaacg ccgccatccg gtcgcgcacc agttcgccca gcgtttttcc tttcaggcac
    37801 accagttcgg ctaccagcag ccacgggatc atgccgctgt cgcagtaagc gaaatcacgg
    37861 aagtaatggt gagcgctcat ttcgccaccg tagatggcgt cttccttgcg catccgttct
    37921 ttaataaagg cgtgtccggt tttcgacatt accggggtgc cgcctgcggc agtcaccaca
    37981 tcaatagtgt tccaggagag acgcggatca tggatgatct tcgcgccggg atttttttcg
    38041 aggaacgctt ctgccagcag gccgacaatg tagtagccct cgataaactg ccctttttcg
    38101 tcaaacagaa aacagcggtc aaaatcgcca tcaaaggcaa tgcccatatc cgcgccgtgt
    38161 ttgatgaccg cattgcgggt gtcgtcgcga cattccggca gcagcgggtt aggaataccg
    38221 ttggggaaat tgccgtccgg tgtgttgtgt actttgatta attccacggg cgcgccgagg
    38281 gctttaaagc gggcttcaat ggcgtctacc accggacccg ctgcgccatt cccggagtta
    38341 atcaccagct tgagcggcgt gaggtttttg acattgatat aaccgaacag gtgatcaacg
    38401 taagcgtcac gcaggttgat ttgctgatag cggccgcgtt tggtttcatc gacgggagga
    38461 aagtcgttgg cttcagccag acgctggacg tcgcgcagtc cggtatcacc gctgatcggg
    38521 cgagcccctt cgcgcaccag tttcatgccg ttataatcca tcgggttatg gctggcggta
    38581 acttcaatgc cgccatccac gccgagatgg aacgtggcga aatagatctc ttcggtgccg
    38641 gacatgccaa tatccagcac atcgacgccc gcatcctgta aacctctcgc cagcgccagt
    38701 tttaaggttt cgctggtgag gcggacatca ccgcctaaca caatggtttt cggtttgaga
    38761 aattcgccat aggcgcgacc aatgcgccag gcgatatctt cattcagttc ttcgcctagt
    38821 tttccgcgaa tatcataggc tttaaagcag gttaattttt tcatatcgtt accctttttc
    38881 aggcaatagt tggccctgac cgaagcggcc aattttattt ttgtcgttat ttacaccgcg
    38941 gtttcgcatt cattgcctga tgcgacgctg ccgcgtctta tcaggactac aaacccgaac
    39001 cgtaggtcgg ataaggcgtt cacgccgcat ccgacaaaca gctcctgatg cgacgtttac
    39061 acccgtccgt agcgatccgc gaagcgcacc acatcatcct cttcgagata agagccggag
    39121 cgcacttcaa ttaaatcgag cggaattttc cccgggtttt ccaggcagtg cgtcgccccc
    39181 agcggaatat aaatggactc gttttcacca agcagtttga tatcaccatc aatggtgact
    39241 tttgccgttc ccgcgaccac tacccagtgt tccgcgcggt gatggtgcat ctgtaccgac
    39301 aagccctcgc ccggtttcac ggtgatgcgt ttcacctggt agcggtcgcc cgcgtcgata
    39361 gagtcatatt tgccccacgg acgatacact tcgcgatgca cccgatgctc atggcgacca
    39421 tcggctttga tctgctcgac cacttttttc acatcctgca ccgcgttacg gtcggcaatc
    39481 agcaccgcat ctttggtctg caccactacc agatctttca ccccgacggt ggtgaccagg
    39541 ccagattcgg cgtacacata gctgttttca gttttgtgat taatcacatc accgtggcaa
    39601 acgttgccct cggcggtgtg ggcgctgatc tcccataatg aagaccagga accgacatcg
    39661 ctccagcccg catccatcgg caccacaacg gcatctgccg tacgttccat gaccgcgtaa
    39721 tccaccgact cttccgggca ggcgagaaac gcttcttcat ccacgcgaat aaaatcgaga
    39781 tccggatcga cggcgctcat cgcttgttca caggcgtcga gaatatccgg gcgatatttt
    39841 ttcagttctt cgagatagcg tccggcgcgg aacaggaaca tgccgctgtt ccagtaatat
    39901 tcgccgcttg ccacataggc ctgggcggtt tccagattcg gtttttcgac aaactgcgcc
    39961 acttcaaagg ccaccgtatc ctgctcaccc gcagatactt caccgcgacg aatatagcca
    40021 tatccggttt caggtagatc cggcacaatg ccgaaggtca ccagcttgcc cgcttcggca
    40081 tacggcatgg cattacgcac ggcggcacgg aacgcgtctt catcggcaat cacatgatcc
    40141 gccgccaata ccagcattaa cgggtcgctc tccgggctat gacgttttgc cgccagcgcc
    40201 gccagtgcaa tggcaggtgc agtgttacgc cctgccggtt cgagaataat gttctcggtg
    40261 agtttgttca gttgacgcag ctgttccgcg acaataaagc ggtgctgctc attgcaaatc
    40321 accaccgggc tttcgcactc cacgccgttc aggcggcaga tggtggtttg cagcatggtg
    40381 agatcgcctt tcaggcataa aaactgcttg gggtaaagta cgcgggaaag cggccataag
    40441 cggctaccgg agccacctgc catcacaact ggatagagtt tcgactgcgc cataattatc
    40501 cccgaatatc atttataaat tgacgtaaca cgttctcttt atcgagtgtg cgttcggcat
    40561 attcacgtgc caccgtgttg tgtttgggca gcaggagcgc ctgacggatc cccgccacca
    40621 gcgcctcgac cgattccggt tctacgcaaa ccgcaatgcc cggaaaggtt tcgcaaagct
    40681 gccccagttc tgtgtgggcc tctgcggtaa tcaccgcgtt accgcctacc gccagaatat
    40741 tggtcagttt cgacggcaat acggcatctg ccgcgccgcg tttttgcacc accagatggc
    40801 aatcgcccat cttcagcagt gcgggtaaag cgtcatacga ttgcagcggg aaaaattgca
    40861 tgttgcgcag tccacgctgc tgcgccattt tttccagccg cgctttgccg ccgccctgcc
    40921 cgacaatggc aaaaatcagc ggttcatcgc gcagacgatc ggcagcttca ataacgtttt
    40981 ccagcccctg cttttcacca atattgccgg agtaaagaat gatttttttg ttatccggca
    41041 ggtcaagctg gttacgaagg gcgtcaacat cggcatctgc aacatgctga aaacgggcaa
    41101 tttccgacca gttggggaag aagatgacgt tttccgccgc cacgcctttt tcgatggctt
    41161 tattcatcat cgaacgcgaa atcgtggaga cgttatcgac gttatgcagt ccgctacgtt
    41221 cgaacgccgt tgccagctgt gccactttgc cgcctttgcc ttttccggca aggcccagcc
    41281 ccagcatggc gtccacttcg taatcctgaa tatgcagcac ggtacgcgca ccagagagct
    41341 tcgccagcag gcgcattccc ggcgtgcaaa acagcgttgg cactacgccg ataatgcgat
    41401 ccggcttcca gcgacgttgc gccatcagtg gaaagaaact gctgacggca aaactgccga
    41461 gatgcaacaa gcgtttcagg gtgctcggct gttttggcac gtacagcggg cagcgccaca
    41521 ccgtggcggc cccctcttct cgtttgtagc gccaggcgga atagttctca cccacctgcc
    41581 attgcgggta gtaaggcggt gcggtaatga cccgcacctc atgaccttgt gccgccagcc
    41641 attccaccat ctcgccggtg tatttgccga tgccggttaa ctccggcgag tagttaatgc
    41701 cgtagaccag tattttcata atccgggtac tccggcacgc ttctcagcga gaaaataggc
    41761 gcggctgtta gcgtgaacat cgttactggc gagcagcgcg tccggcgtca gccagcggta
    41821 atcgtcatgc tgctcatccg gcattaacag ctcttcttcc gctactctga agcgaaaacc
    41881 gagcaccaca tagtgagtgg tgaaatccgt gccggagaag ttatcgtcat aaaagtgctg
    41941 ccagacaccg taaaactggc ctgctgttat cggcagacgc agccccagtt ccgccatcgt
    42001 cagccgctca aatgcggctt ccagcgtttc gtctttctgc acgcgccctc ccggcacaaa
    42061 ccagtaaccc tgcgccgggc ggttggttct tttgccaagc agaaactcgc cgcgactgtt
    42121 ctcgacaata aagtcgagag agacaagcgg tgtggagcgc actacagtgg caaagtcttc
    42181 ctgacgtaaa aacatcattc cccccgaaag cggtcttgat tctcaaggaa ccactggtaa
    42241 gtgctggcaa gccccgcttc cagtgagatt tcgtgatacc agccaagctg atgcaggcgc
    42301 gtcacatcca gcagtttgcg cggcgtacca tccggtttgc tggcatcaaa aaccacccga
    42361 cctttgtaac ccaccacttt ggcgatggtt tgcgccagct cgcggatagt gcagtcaacg
    42421 cccgtaccaa cgttaatgtg cgacagcatc ggctgggtgt tctccagcca gacttcatgc
    42481 gccagctcca tgacatgaat gctcgccgcc gccatgtcat cgacgtgcag gaattcacgc
    42541 atcggtgtac cgctgcccca taccaccacg tccggcgcat tctgtgccgt cgcctcgtgg
    42601 aagcgacgca gcaatgctgg gatcacatgc gagttactcg ggtggaagtt gtcatgcggg
    42661 ccatacaggt tggtcggcat gactgagcgg taatcgcgtc cgtactggcg gttgtatgat
    42721 tcgcacagtt tgatcccggc gattttggca atggcgtaag gctcgttggt cggctccagc
    42781 gtgccctgca ataactcgct ttctgccatc ggctgttttg ccagtttcgg gtagatacag
    42841 gacgatccaa gaaacagcag tttgttcacg tcgttctgat gcgcggcgtg aatgatgttg
    42901 ctctcaatca tcatgttctg gtagatgaaa tccgccggat aggtgttgtt ggcaacaatg
    42961 ccgcccactt tcgccgccgc cagatagacc tggtcaatgc gttcgctggc aaagaaatca
    43021 tgcaccgcgc ggctgtccag caggttcagc tcgtcgcggg tgcgtaatac cagttccaca
    43081 tcaccgcgct gttcgagctg ccgcctgatg gcagaaccga ccattccgcg atggccagcg
    43141 ataaaaatgc gttgtctact catgcttatg actccagcgc gatcgccacg tcgtagccgt
    43201 gagatttcag cagagagtgt tttttcgccg cttcgaggtc attagccacc atttcagaca
    43261 ccatctctct gagggtgatt tccggtttcc agcccagttt ttcgtgcgct ttggtcgggt
    43321 cgccgagcag cgtttcaact tcagccggac ggaagtaacg cggatcaacg gcgataatca
    43381 catcacccgg tttaacgccc ggcgcgtcat gcccggtgac ggaaaccaca atgcccttct
    43441 cttcaacgcc cgtgccttca aagcgcagtt tgatgcccag ctgtgctgcc gccatttcca
    43501 cgaactgacg cacggagtac tgaacgccgg tcgcgataac gaaatcttcc ggctgttcct
    43561 gttgcagcat catccactgc atttttacgt agtctttggc atggccccag tcacgcaggg
    43621 aatccatatt gccgaggtac aggcacgact ccagcccctg ggcgatattg gcgattgcgc
    43681 gggtgatttt gcgggtaacg aaggtttcgc cgcggcgcgg ggattcatgg ttgaagagaa
    43741 taccgttaca ggcgtacatg ccgtaggatt cgcggtagtt aacggtgatc cagtaggcgt
    43801 acagtttggc gacagcatac ggagagcgtg ggtagaacgg cgtggtttct ttctgcggaa
    43861 tttcctgcac cagaccatac agttcagagg tggaagcctg atagaaacgg gttttctttt
    43921 ccagaccgag gaagcggatc gcctcgagca ggcgcagcgt acccatcgca tcgacgtctg
    43981 cggtatattc cggtgactca aaagaaaccg caacgtggct cattgcgccc aggttgtaaa
    44041 cttcatccgg ctgcacttca cgcaaaatgc gtgtcaggtt ggaggtatca ctcaggtcgc
    44101 cataatgcag atggaatttc gggttgcagg tgtgcggatc ctgataaatg tgatccacgc
    44161 gctcggtgtt gaatgacgat gcacgacgct taataccatg cacctcgtaa cctttttcca
    44221 gcagaaactc tgccaggtaa gaaccgtctt gtccggttac accggtgatg agagcgactt
    44281 ttgacatgtc ttattcctct gtattttttg aatttattca gtttcaacgc gttcgcgtat
    44341 caccactgcg ggattccccc ggcaaaccac atttgccgga agcgttttaa aaacactgct
    44401 tcgtgcaccc acgacggtgc cgtcgccaat cgtgacgcca ggggcaacaa aaacatcggt
    44461 tgccagccag catttctcgc caatcacaat aggcgtagca ttaatggtga aatgttgact
    44521 tgcatggtcg tggctaccgg tgcataaata acttttttgc gatatcaccg aatgtgcgcc
    44581 aatggttatt tcaccgaggg tatataaatt gacgtcatcg ccgacccacg cgtaatcacc
    44641 taaggttaat ttccacggat aggtaatttt tactgacgga cgaataacta cgttttttcc
    44701 tatttttgcg ccgaataaac gtaataaaaa tgcccgccag cgatacaata cttgtggcga
    44761 ccaggcaaat attgttgcct gtactgccca ccataattgc actttaatag cgttgccgcc
    44821 ccggaaccct ttcggcaccg agaaaccgct taaatcttgc attggttctc cttatattca
    44881 gactttgtta tataaggctt tcgtctttga ggtagtacgt tggcgtaaat gccaggataa
    44941 ttcagcccaa aagccaggta catgtaatat ttgtcgttgg acttttttcg cgtcagcaca
    45001 caattccata ttattggtgg tagatacccc acccatggaa aattcagaca ccaggccatt
    45061 gagtttttta aatgcataac cggctttata cattttggct gccagcgcgt agtcggaaga
    45121 aactttatat tccaggtcat aacgccattt tttcaagccg gatacaggga aaaatatcgc
    45181 ctgatgactg gcgggcaggc tgtgataaat ataccagccc ggtttggcgc tacgtttaat
    45241 tttatgcccg tcgccaaaat ccagcagcgc atcgccggtg atcatcatgt tatctttttg
    45301 catttttaac ttacggacaa aatttgcggc atcctgatga aaaatatcgc ccgaattgag
    45361 aaacaacgcg aacttgcctt gtgccatcgt aatgcctttg ttcatggcgt cgtagatacc
    45421 gttatctggc tcgctgacaa agcgtaggtt atagatacca ttgagatttt ccagatactc
    45481 acgggtgccg tcattggaac cgccatcgac aacaatccat tcgaagctga tatcttccgc
    45541 ctgcgccaga tgcgccagcg aggcatgtgt tttgactatc ccttcgaggt tacgaaacgc
    45601 gacagtgatt atgctaagca acatgttctt attcttacct cgtaatattt aacgcttttc
    45661 gcaaaataaa cggacagacg attaaaaatg catattccgg gctaaatatc gaaccggtaa
    45721 aaaacagcga taccggagta aaaagatata attgcacgcg aaaattgcgg ttatcaccaa
    45781 aagcgttgat catcattttt atcactttcc ccatgtacca cagcgataaa aacactgcga
    45841 accaggaaaa ataaataatc agcagataca aaccattgtc tatggttttt ccgacatccg
    45901 caccgttaaa tattccgaat gatgcgacgt attcataaag tgagccaaat ctgactacac
    45961 cgtcaatatg ggtcaaagaa taaccgacca tcaccagcgg accgacaata cgataatacg
    46021 atgacgatcc ttccgtacct aaatcgccca gacgggtgga aatataagga aacgcgatta
    46081 ccacaccaac caggaataca gccagagaaa tcaatgccaa cggtaacttt ttcttaatcg
    46141 cctctttatt cagatattga aatgcccact ccagcaaata aaacaggata aaggtcataa
    46201 cccctgaaaa cgatccggat aatattatcc ctgcgagaat catagcatcg gttttaggcg
    46261 ttttgatacc aaactgtttg atgctgagcc aaattgagat taatgccaga gcgaaaaatg
    46321 ccggttcgaa ataaagtgct gtcgtgcgct tgccgccgaa tttaatgaaa ttcagtacat
    46381 agctgttgct gtaaatcaga tatttcgaaa tcgactccat aatactgctg ccaccggtga
    46441 ggataatttg cgccatctcc accaccgcca gcgccaccac cagcccgacc accagataaa
    46501 agaaacgtaa tatcttgcga tggttgtgtg gcgaaatcgt tttaaagcga atactccaca
    46561 ccatgccaat aatgatcaca atatagacaa acagcatggt tgatgtgacg tatttactgg
    46621 catccaacga ctgaccaaac agatagttga acgccgtgag tcccgcacca atccctaagg
    46681 caatcatcaa ttttttaacg ctgatgcgtt ctaaaaacag cagtaacaag acaggtaaaa
    46741 aagtgacgat agtgatgggg aaactttcac caagctgggc gattttgacg ttaaccagca
    46801 ggtagatcag cggcagcagc aggtagctac agattctgat agaagttgac atactcctcc
    46861 agcatctgtt gtccactgta ggcggcgcgg ctgcgttggc tgaactcagc cagcgtggta
    46921 ccaaatatcg cctgcgcgat ttccggtttg cttaactgaa ccagttgcag cacgtcttct
    46981 tcgctgacag tttttcctcc ggatttttgc agcacttccc gcgccgcatc gctatgggtg
    47041 gcgatcaccg gcacaccaat cgatagcgcc tcacacaaaa tcagcgggta gttatcgaca
    47101 cgagaactga acaccagcgc atccatctga ttgagcgcgc tcatcaactt gcgcttgtca
    47161 gtttcaaagc cgtgattaac cacgttgcca gcggtgaacg gcgagaactt accaaaggta
    47221 tgcagttcga ttttgtcgcc cagcgccatc atctcacgca ccagttgctg gttagttttg
    47281 ccgtcgtaac gcaggtcatg cgccaccacc gcgattttcg gcttgccctg ggtttcgcgc
    47341 accggaggca gatccgccag aatcgcttcg gttgccatat caatgccatt attgataatc
    47401 cggcaacgcc ctggaccgta caggctattg aaagcatcag ccacatgctg gctgggggaa
    47461 ataaactgac agcccagcgc cagcatctca cgaaataact ggcgtttgcc cgccaccagc
    47521 tggtgcgcgc gatcaatctt caccggcgga tagttattta aggtcgggca tttctggcaa
    47581 cccgttttcc agccttcgca accgtcggta aaggcgcagc gcccggttac actccagtga
    47641 tcgtgcagcg tccagaccac agtgacgtcc ggtttatggt ttttcacttt ttcgcaaaag
    47701 cgcaccacgc tcttaagatt tagccagtag ctgtgcagca catgaaaatg caggaccacc
    47761 ggacccggtg tgcgagtaat ggtgcgatat aactcattga aattgccaaa cagatcgcga
    47821 ttaaacagac gaaacagtgc aatgttcgcc atcgcggtca tccgcggcgt atgtttgatt
    47881 acctgcggat agttttgatg gctgacgctc tctttgccgc ctttgccgta gccgtagaca
    47941 aaatgtgacg ccagcccctg ttgcagcgca cgctggtgga gatctaacgc cacacctgcc
    48001 gctccgcctt ccgccagtcg cacattaaat tgcagaatat tcatttaatt accttcactc
    48061 gcgctttttc tcccaccacc agcgcgttgt ccgggacaga gtcgagcacc acgctgcccg
    48121 cgcccacggt gacgttgtta ccaagcgtga tatcaccaag aataatgacg ttggcaccga
    48181 gttcgacgcc gttgccaatg tgtggacatg ccatgttatc ggcaccacga ttgccgatag
    48241 tgacgccgtg gcgaatggta aaatcatccc ccgcaaccac gtttttattg atcactacgg
    48301 cgtaaccgtg atggatagta aagcggcggc caatggttgc ggctgcctgg atttcataac
    48361 cgaaaaagca ttcggtgata atgcgataca gcaccagcag cggtgccgcc cacagattgt
    48421 tgaggacgtt ctttttgcgc cacaccgaac aaaaatgagc aacacgatag gcaagaacca
    48481 tgcagcacgg gcgtaaactc cagctgttgg cgcgcagatc ttccagcatc tttagcgccc
    48541 ccgaatacca tcagccagac gtttgccgtt acgcaccgac agcagcgtca acaaggtgcg
    48601 ccaggtcatg cgtttattac ggatctggta gagggtaaac agctgatatt ttttgcttgc
    48661 acggtcaaat ttatctttgt gctttcggta aaagtggaag tacccggaga attttttcgg
    48721 tgacgaggtg atctgcattt caccgtgatt gatatgcagg atctgcgtcg cttcttccac
    48781 tttccacggt tcgccgtact ccaccaccat ccgcaggaag atgtcgtaat cctgtgctgc
    48841 tttcagttcg gtatcgaaca aacactcttt gaaacgccat gcccaagtaa agacctgatt
    48901 gccaatgata ttgcgtttat agaacaggcg gcgtgaatac ggcgatttgg gatatagcgg
    48961 caaacttgct ggttgggaat agacttcgcc ctggcaaacg tagtcgttag cgtacaaaaa
    49021 ggcgtgagtg accagttgct gtttatgggc gaggaagacg ctcagacggt tgggtgtcca
    49081 ttcgtcatcg tcatcaatcc cggtgatgta ttccccttgc gccagcataa tcgcctggtt
    49141 acgtaccgcg cacgccccgc tgttaatgtc gttgtgaatg taggtgatac gcggatcgtt
    49201 gagggcagtg acgtactgtt gcagttgttc ccaggaggtg gagcaatcat ccacgatgat
    49261 catctcccag ttgctgtagt cctggcgcag gaccgatttt atcgcccgaa tcgccagttg
    49321 ttggcggttc caggtcggca tatagattga aatcagcgga ttgtctttca taggttgttc
    49381 tcccggagtg tcgagatgtt ctgccggttt ataagcttgt ttacgggttc tgttgccgga
    49441 tgcggcgtga gcgccttatc cggcctacgg agctggtttg cttgccggat gcggcgtgaa
    49501 ggtaggtcgg ataagatgcg tcagcatcgc atccgacagc ggatgtcgtt atttcgcatc
    49561 cgacttatat tcgtattcgt aatagccata atcctgatac gcgctggcgc ggcggaagat
    49621 ggagttcaga atcacccctt tcaccggaat accattttgc tcaaagcggc tcagactggt
    49681 ttccacttct ttcaatgtgt tgaccgcata acgcgccacc attaacgtgg ttccaacatg
    49741 acgaccaaca attgccgcat cggtcactgc cagaatcggc ggcgtatcaa tcaacaccag
    49801 gtcatagttt ttactcgccc agttcaccag ttcggcaaag cgttcgctca tcaacagttc
    49861 agaaggattt ggcggcacct gaccgcgcgg gatcaggtca aatttggcaa tagaggtcgg
    49921 tttagcagcg gtagtaatat cgccctgacc aatcagaatt tccgacaggc cattaacgtt
    49981 attagtgccc agcagctcgt gggtgtagcc tttgcgcata tcgcagtcga tcaacaacac
    50041 ccgtttattg gtctggctga tcaccgccgc caggttggcg cagacaaagg ttttaccgat
    50101 tgacgggcta accccggtca tcatcaacac attgttctgt gcctgcatca tcgcgaagtg
    50161 caaactggta cgcagactgc ggatggcttc aatcgccaga tcggttggat tccccatcgc
    50221 cagtagctgg ctctgtttat agcgtttaat ccctttgatg gttttgacgc tatcgcgcgc
    50281 tttctgccat tccgaaagcg ggatgctggc atagacgctg ataccgtgtt cttccagcac
    50341 ctgcgggctt tcgatgccgc gattaaacaa cgagcgcagc agcacaccca cgatagaaag
    50401 catcaggccg aggataatcg ccccaaggat aatcagctct ttcttcggtt tcagtacacc
    50461 tggctgggtg attgccgggt caacaatgcg cacatcgccg acggtgctgg cctcggtgat
    50521 tttcagctcc tgctctttat tcagcagttg catatagacc tgctgaccag actcgacatc
    50581 gcgggtcaga cggacaatct cctgctgggt tttcggcatc gccgttacgc gaccgttaag
    50641 tttggctttt tcgtcttcca gcgcctgacg tttctccagc agcgtgcggt acgccgggtg
    50701 aactttggtg tacagcttgg agatttccgc ctctttaaag gtcagttcgt tcaactgggc
    50761 gtcgatgttc accatcgaat cgagcaccgc tttcgcttcc agcggcagat caacagaatc
    50821 tttatcctga cggaaggcat tcagtttgtt ttcggcaaca tcaaggcggc tacgtacttc
    50881 cggtaactgt tgcgcgagga aagcgaggct tttcgacgct tccgccgatt tgcgctcaat
    50941 attttgttcc tgatagttac gggcgatgct gttaagaatg tcgcggatct gttcgcgatc
    51001 ttcaccggta taagtcaggc tcagtacgcc tgcgtctttg ccgttctccg ttaccgtcag
    51061 gctgttttgc agttgattga tcatccccag cgtggagtat ttggtgacgg taaactcact
    51121 gcccgggcgg gcgtgaatgg cttcaaccat cagcgtgacg ccttcttttt tcagcatctg
    51181 gcccgcttgt ccacgggcgc taaagccgcc atcactgctc agggtgtagt ttttatcgtc
    51241 cagcacatta agcgtaaaca cctgatccgc catctctttc gggcggttaa aggtggtcac
    51301 tttcaccgtc tcgttctgac gtcccatcaa acgatcccag cccgcaccga aaatcgggaa
    51361 cgtgtttttg ctcaccgcaa tatcgaggtc gagatcgtcc accgttttac caagcaccag
    51421 acgcgaacga atcaactgga tctcggcgtc cgatgcaggc ggtttgttgg ctaatgccga
    51481 accaatgtcc tgcactaacg aattgccgct gttttgctcg atttgtacca gtgcgtcggc
    51541 actataaatc ggcgtggcga agaaggtgta aaccacggca cagagggcaa atacagcggt
    51601 gatgccaatc acccaccagc gcgcttcaat gacggtgccg accaggcgac caatatcgat
    51661 ttcatcactg cccgttaccg gagcggcatg ttgttttact ttttctgtca ttcttatacc
    51721 tgctctgcgt tcaatgcctg cgcccactgg cgggcagacc gttcaagtaa tgtgtacacc
    51781 gctgcaaacg tttcccggct tttgcgatac ggatcgggga tttcacattc gttatcccag
    51841 tgaccaaaca gcatcacttt gccgcgcatc tcaggtgcca tctcgcataa gcgttcgata
    51901 tggcgctttt ccatggtcaa aatcaggtcg tagttgcgac acagacggcg gctgatttgc
    51961 cgtgcacagt gaccttccag agacagttga tgttctgcgg cgatgctgat agcagtaggg
    52021 tcagcgccct taccgaccag cgcgccgagt ccagcggact ccactttcag ctccgggtga
    52081 taacgttgca gtaagcgttc cgccgtcggg gagcggcaaa tattgccgac acagacaact
    52141 aagatgttgt taaacatgac gattaccagt tatgaatgtc gctggctgta tccgtcatgt
    52201 aacggacacc gctaatagtt ggcagcaact gattgatcag acggttccag cgggaaaccg
    52261 gggcggtggt gacatacacc acgtcataag gttgcaggcg gaattctgtc gccatcacca
    52321 gcgacgtggc atcggacata tccagctggt agatattggc aatcttgccg ttacgcccgc
    52381 cctcgccttt cagcggacga atgacaaaga tgccgctggc gttggaggtg gtcatgtcga
    52441 taccttcagc attacccagg gcttcagtca gggtcatgcc gctaaagtcc attttcaggg
    52501 tgctctgttt cttcacttca cccatcacaa atactttcag atcatcatta cgcggcacgt
    52561 agagaatatc gccgggataa agcagtcggt tctgattgag gtcgccgttt tgcatcagca
    52621 cctgcaaaga aatgcgttct tcacgaccat tgtgtgttag caccacgttg cgccagtcag
    52681 cggtgtcggt caggccacct gcggcgttga tggcgtcgag aatggtcagt ggtacgttgg
    52741 tgatcgcctg ttgaccggat ttattcacct gacctgagat ataggtcttt tgtgagcgga
    52801 aggcggcgat attaacgtcc acctgcgggt cagcgatgta cgtcgctaag cgcccggtaa
    52861 tatcactgcg gatttcagcg agcgttttcc cgactacgtg aaccttgccg atatacgggt
    52921 aaaacatagt gccgtcaggc tgtacccagt tgccggtgtc gctggagctg cggtactgac
    52981 cagctggcgt ggtgagttcc gggtgatccc agacggtgac attaagaacg tcccccggcc
    53041 cgacgcgata ctggtaattc gcgatctcgc tttccagcgt catattgggg cgcgctacat
    53101 tcgggcgtgg gcgtaattgg tcaatcaggc gcggggtcag cggataaaca ttcaccattt
    53161 tgtcgagatc gaaatcagcg tcctgctgtt tgatgacgtc tttgcccatc gtcgacatat
    53221 tgctgcccgg aagtactgtg caaccgctta tcaaggttac tgacaccaat aatggcatca
    53281 atttcatttt ggatttcatc attgtttatt tatcactttg gcagagtaat tatcctgtgc
    53341 actattaata gcaatgtcgc catgcacatt taccttgcag ttaattgaat acaaatttaa
    53401 ctggcatcag tcctaaaaaa attgatttca tccgcaggct attgacagaa taattcagac
    53461 tggtctttca ggcatccaga cacgctaccg cccctggctt tttagccacc aatacactga
    53521 tttagcttaa ttttttaaac cctctctgca tacaatcgtt gatgagaaag ggttattgcg
    53581 gaaattaact tccgaatata aggtgacatt atggtaattg aatattggct ctccaataat
    53641 gcaggaggaa gtgttacagc taacggaata gcaggcaagg taacaattcg gcaattggct
    53701 atttttaaga attatattaa gtgtcattca atatggtttt taggagtttc tttaggttga
    53761 caatatttaa tattgcgcct ccgcatgcga tatttcttaa ataatgtttt attattacca
    53821 cttttaattc agggataatg tgaggttatt accctcaaat aatatgagat aaatagtgct
    53881 gcaacattgc atttttgccc cgatttatcc atgatcgaat tgtgacattt gtcatacaac
    53941 gaataggttt tgtacttact atggaatgga ttgccgatcc gtctatctgg gccgggttaa
    54001 tcacgctgat tgtgatcgaa ctggtcctcg gcattgataa cctggtcttt attgccatcc
    54061 tcgccgaaaa actaccgccg aagcagcgcg accgcgcacg ggttaccggg ctgttgctgg
    54121 cgatgttaat gcgcctgtta ctgctggcgt caatctcctg gctggtcacc ctgacgcaac
    54181 cgctgttcag cttccgctcg tttaccttta gcgcccgcga cttaatcatg ctgtttggtg
    54241 gtttcttcct gttgttcaaa gccacgatgg agctgaacga acggctggaa gggaaagaca
    54301 gcaataatcc cacacaacgc aaaggtgcga agttctgggg ggtggtgaca caaattgtgg
    54361 tactggacgc catcttctca ctcgactcag tgattaccgc cgtcgggatg gtcgaccatt
    54421 tactggtcat gatggccgcc gtggttatcg ctattagcct gatgttgatg gccagcaagc
    54481 cgttaacgca atttgttaac agtcacccga ccatcgttat tctctgctta agcttcctgt
    54541 tgatgattgg ctttagcctg gtggcagaag gtttcggctt cgtcattccg aaaggctacc
    54601 tgtacgctgc cattggtttc tcggtaatga tcgaggcgct caatcagttg gctatcttta
    54661 accggcgacg ttttctttcc gctaaccaga cgctacgcca gcggactacc gaagcggtaa
    54721 tgcgcctgct tagcgggcaa aaagaagatg cggaactgga cgccgaaacc gcgtccatgc
    54781 tggtggatca tggtaaccag cagatcttta atccgcagga acggcggatg attgagcggg
    54841 tacttaatct taaccagcgt actgtcagca gcattatgac gtcgcgccac gatattgagc
    54901 atatcgatct caacgcgccg gaagacgaga tccgccagtt gctggagcga aatcagcata
    54961 cgcggctggt ggttaccgac ggtgatgacg cagaagattt gctcggtgtt gttcacgtta
    55021 tcgacctgct acaacagtca ctgcgtggcg aaccgctcaa cctgcgggtg ttgattcgcc
    55081 agccgctagt gttcccggaa accttgccgt tgttacctgc cctggagcag ttccgtaatg
    55141 cccgcacaca ctttgctttt gtggtggatg agtttggctc ggtggaaggg attgtgacat
    55201 taagtgacgt cactgaaacc attgccggta acttaccgaa cgaagtggaa gagatcgacg
    55261 cccgccatga tattcagaag aatgcggacg gttcctggac ggcgaatggt catatgccgc
    55321 tggaagatct ggtgcaatat gtgccgctgc cgctggatga aaaacgtgaa tatcacacca
    55381 ttgccgggct gttgatggaa tatttacagc gtattccaaa acctggcgaa gaagttcagg
    55441 tgggggatta tttgcttaaa acgttgcagg tggaaagcca tcgcgtgcag aaggtgcaga
    55501 ttattccgct gcataaggat ggcgagttgg agtacgaggt gtgatggtat cggtcatttt
    55561 acccaatagc cgaaaggaat aagatgaggg aaccgcgcca gcggcgattt accgccggga
    55621 gcccgggttg ccagggtggt ggcgattgag cccccctggc acgttcaccg gcttgagcgt
    55681 tccatagtag cgaggaacat caagtgaacg gaacagcctt cgatcttaca tattcagaat
    55741 ataatgatgc cgccacgaac gcctgatgcg acgctttacg cgtcttatca ggcctacagg
    55801 acaggtcacc aggtaaccta catcttctcc agcaacttct tcacatcttt gccattgcgg
    55861 gaatctttat tccgctcggc ccagtcattc agacgacgtt tcgcttcgtc ctgtagatgt
    55921 ttgcgcagta actgatccac ttgcagactg taattgagtt gctgccagtt gccataaacc
    55981 cgcagcggta ctggcgtttc tttaaggaaa tcaatcagtt tgctttcccc gttccagcca
    56041 cccacgaccc gaatatcaaa ctgggtgtcg caggtttgct ccgccagatt caacgtacca
    56101 gccccggaaa gcgccagcac aggcgattga ccttgcatgt cgtttaacgt cacgacgcca
    56161 tccttcaacg tcaaatcggt ggtaaagcgg tcaagacgcg ttacgttatc gaagttttca
    56221 gcggccttca catcaccacc attacgttct accgcttgct gaatcatctg ctggaagttc
    56281 atcccttcca tgcgcgtgtc ggtcatttcg acatgtgcct gtccttgcca gttgtggcgg
    56341 aatgcgtcgg catctatgtc agcaccggag aaatcaccag ccagtgacat ctttccggtc
    56401 aacgaaatcg gatagttaaa cgccttcaga atggtgccaa tctcaacgtt ttccagccgt
    56461 ggctggaagt ttatccgcgg atttattgat gtcgcgtcca gcgtgcccgg cagtgaaacc
    56521 tgtccaccgt taagcttgcc ctgcagttga gtaatttcca gcaaacccga cttgttggtc
    56581 atttgcgtgg caacatctgt aaaattcatt ccgcgccagc gcacgttact ggcctgcaac
    56641 aaaatatcag ccgtaaagcc ttgcagtccc tgatatgccg gttcatcaat acgcgaagaa
    56701 atgaccgggc gcggcaacgt tgattggctc tgcccctgct gcgcggcacc gttttcacca
    56761 ttcgctgttt cattaagcgg gatgaggttg tcaagattca gttgcgggaa ttgcagtctc
    56821 agctgccatt ccggtttctc tgtcagcgtg acctgtgctt gcccgctcag cgtactgtca
    56881 ttggcggtca aactaatttg gttaaatgaa aggcgtttat gtgactcctg ccactgggcc
    56941 tggaaactcc cctgcccatg aataccttgt tttggtaaat ctgcaccctg caactgccag
    57001 ttaatttgtt caatagccgc cgttaaatca tgcggataat cagaagcatc taccgtaccg
    57061 ttaagggata tcgtgagatc gcgctgatcg cgattaaccc gcccggagaa ctcaaatgaa
    57121 ccacgatgtt ggggatcttg ttccatttgc aggcgaatat tgcggattgt cacctgctcg
    57181 tcatcttcat gctggaacac cagcacgctg tccgccacct taagactgga tatatcaaac
    57241 gaccatccgc gatcgtctga cagatccggc aaggtattgt cgcgcggtgc aaccggagcg
    57301 tcttcactgc gcaccacttc cgtctgcggc gtcagttgga tcactgcccc ttttagcatc
    57361 acctgcttaa cgctcagttg atgactcagt agtggtaaaa gcgccacgtc cagacgcatg
    57421 ttgtcggcgc gaaccagtgg ctggctcgcg ccctgggcgg tgagagacat tcgcccggag
    57481 aggatactaa gctgcggcca gacgtgccaa cgcagtggcc cgtcgagctg caattgataa
    57541 ccgctacgtg cagcaacttg cttgaccata tagttgcgga aatcattcgg attcaccagc
    57601 aacactaacg cagataaccc ggccaccagc acgaccagga gtatcatcag cgtcgtcaga
    57661 aatcgtctca tggtatcctc aatgggcctg aattagtctt tatcgattcg gctggctacc
    57721 gcgccctgct ggttgcgata tttcgcatct tcacggcggt tgtaaggtcg cgccgccggg
    57781 ccggaaagcg gctcaaagct cagcgcacca attaacatgc ccggacgcag cgccagcggc
    57841 agcttaccgg agttgtagaa ctccagcaca atgcaaccag accagcccgg atcgatacgg
    57901 tgcgcggtga cgtgcaccat cagccccaga cgcgccaaag aggaacgccc gtccagccag
    57961 cccaccagat cggctggcag cgtcaccgac tccagcgtca ccgccagcgc cagttctcct
    58021 gggtgaagat agaacgcctc gccctcgtcg agaacgatct catcgctcat cacgcggtca
    58081 agcgcggcgc tcacttcatc tttgggaccg ctcagatcga taaacgctgc cgtgtgacca
    58141 cggaaggtac gaaatttatt gcccaggcgt acatccaccg tcgcgccgtt aatacgctcc
    58201 actggcggac gtgggttgat cgacaaacgg ccttcatcaa gccaggcttc aatatctcgg
    58261 tcacacagac gcatggcatt ttctcctttc gcgcatcact cccttaacgc caattacgtc
    58321 aagggcatac caggttatca ctgaacggta cacaatttat caagcttatt caaagaactg
    58381 acttattttc gctttcaata tatcgatcgc gatgcggttt ttcccgccgc gcggcacgat
    58441 aatgtccgca tattgtttag aaggctcaat gaattgcagg aacatcgggc gcacggtttt
    58501 ttgatattgc gccatcacgg aatccattga acgcccacgc tcgttaacgt cacgcttgat
    58561 gcggcgcatc aggcagatat ccagcggggt atcaacgaaa atggagaagt taagttcgtc
    58621 acgcaaacgc gcatccgtca gcaacaaaat gccttcgaga atgatgacct tcttcggctc
    58681 aaccgtcacc gtttctttca tacgcgtatg ttcaacatag ctgtaaaccg gcaggtcaat
    58741 tgccgagccg cgtttcaacg cttgtaaatg ctcaagcagc aggttgtgat ccatcgcgct
    58801 gggatggtcg tagttggtct taacgcgttc ttccatcgac agatggcttt gatctttgta
    58861 atagcagtct tcgggaatta cgccgatgtg ttcatcaccg acttgctcac gtaattcacg
    58921 ataaagggta ctggcaataa gactcttgcc ggaagccgat gcgccagcga taccgataat
    58981 gacgcactga tgagactgat cagtcatata tttagcgacc tgattaacct ggatgttagg
    59041 aagggggcga cgaagcgcca aacgcggcaa ttatagggat ttcatccgcc tgataccagt
    59101 cgaatagcgt tgccgcgcgc tcagagttaa ttgttgacaa agaattcccg gtggcaaatt
    59161 acgttgatca gttttatgta aggtaaaaaa tgttatacgc agttgcgcaa attatccgcc
    59221 tttacgtcac tttatgagca attcacatat aaaatgtaaa acttttgtac tagcataaac
    59281 acagaaacga atactggcga cctggtcttg cggataaagc ggtaatgagc aaacaatcac
    59341 agcatgtatt aattgccctg ccccacccac tgcttcacct ggtcagttta ggtttagtct
    59401 cgtttatctt tacccttttc tcgcttgagc tttcgcagtt tggcacccaa ctcgccccac
    59461 tgtggttccc gacgtccatc atgatggtgg cgttttatcg ccatgccggg cgcatgtggc
    59521 cgggaattgc gctgagctgc tcgctgggaa atatcgccgc atccatcctg cttttttcca
    59581 ccagctcgct gaacatgacc tggacgacca tcaatattgt tgaagccgtg gtcggggcag
    59641 tgctgctacg taaattgctg ccgtggtata accccttgca aaatctggct gactggctgc
    59701 gtctggcatt cggcagcgcc attgttccgc ctctgttagg gggtgttctg gttgtcctgc
    59761 tgacgcccgg agacgatcct ctcagggcat ttttgatatg ggtactgtca gaatccatcg
    59821 gcgctctggt actggtgccg ctgggattgt tatttaagcc acactatctg ctgcgccatc
    59881 gcaacccacg gttacttttt gagtcactgc tcacattagc catcacgctg acgttaagct
    59941 ggctttctat gttgtacctg ccgtggcctt ttactttcat tattgtgctg ttgatgtgga
    60001 gcgccgtgcg cctgccacga atggaagcct ttttgatctt ccttaccacg gtgatgatgg
    60061 tgtcgctgat gatggccgcg gatccctccc tgcttgctac gccgcgtacg tacctgatga
    60121 gccatatgcc gtggctactg tttttgctga tcctgctgcc cgccaacatc atgaccatgg
    60181 tgatgtatgc ctttcgtgcg gaacgcaaac acatttccga aagcgaaacc cgctttcgga
    60241 acgcgatgga atattccgct atcggtatgg cgttagtggg caccgaggga caatggctgc
    60301 aaaccaacaa agcgctctgc cagtttctcg ggtacagtca ggaagagctg cgcggactca
    60361 cctttcagca actgacctgg ccggaggatc tcaataaaga tctccaacag gttgaaaagc
    60421 tgataagcgg tgaaataaac acctattcaa tggaaaaacg ctactacaac cgtaatggcg
    60481 atgttgtctg ggcgttgctt gccgtctcac tggtgcgcca cacggatggc acgccgctct
    60541 attttatcgc tcagattgaa gacattaacg agctaaaacg caccgaacag gtgaatcagc
    60601 aactgatgga gcgcatcacg ctggctaacg aagcgggcgg gattggcatc tgggagtggg
    60661 agctgaagcc gaatattttt cgagctgtat gaaattcctc cgcatatcaa accgaactgg
    60721 caggtgtggt acgagtgcgt gctgccggaa gatcgccagc atgccgaaaa agtgattcgt
    60781 gattcgttgc aatcacgctc gccctttaag ctggaatttc gcattaccgt aaaagacggt
    60841 attcgccata tccgcgccct cgccaaccgg gtactgaata aagaaggcga agtcgaacgc
    60901 ctgctcggca ttaatatgga tatgaccgag gttaaacagc ttaacgaggc attgtttcag
    60961 gaaaaagagc gcctgcacat tacgctggat tccatcggtg aagccgtggt ctgtattgat
    61021 atggcgatga aaattacctt tatgaatcca gtggcggaga agatgagcgg ctggacgcag
    61081 gaagaagcat taggtgttcc gctcctgacg gtgttgcata ttacttttgg cgacaacgga
    61141 ccattaatgg agaacattta cagtgccgac acctcacgtt ccgcgattga acaagatgtg
    61201 gtgttgcact gccggaacgg cggcagttac gacgtgcatt acagtattac gccgttaagt
    61261 actctggacg gcagcaatat aggctcggta ctggtgattc aggacgtcac cgaatcacgc
    61321 aaaatgctgc gccagctgag ctacagcgcc tcccatgatg cactgacgca tctcgccaat
    61381 cgcgccagtt ttgagaagca actgcgtatc ctgctgcaaa cggtaaacag tacacatcag
    61441 cgacatgccc tggtgtttat cgatcttgat cgctttaaag cggtgaatga cagcgccggg
    61501 catgcggcgg gtgacgcttt actgcgcgaa ctggcgtcgt tgatgctgag tatgctgcgc
    61561 tccagcgacg tgctggcgcg actcggtggt gatgaatttg gtctactgtt gccagactgt
    61621 aatatcgaaa gtgcgcgttt tatcgctaca cgcattatca gtgccgtgaa tgattatcac
    61681 tttatatggg aaggccgtgt gcatcgggta ggtgccagtg ccgggattac cttgattgat
    61741 gacaacaatc atcaggcggc agaagtgatg tcgcaggctg atatcgcctg ttatgcctcc
    61801 aaaaatggtg gacggggccg ggtgacggtt tacgaaccac agcaagctgc cgcacatagc
    61861 gaacgggcgg cgatgtcgct tgatgaacag tggcggatga ttaaagagaa tcagttgatg
    61921 atgatcgccc acggtgtcgc ttcgccgcgg atcccggaag cgcgtaattt gtggctgatt
    61981 tcacttaagc tctggagttg cgaaggcgag attattgatg aacaaaaatt tcgtcgtagc
    62041 ttcagcgatc cggcacttag ccatgctctt gaccgacggg tattccacga atttttccag
    62101 caggccgcaa aagcggttgc cagtaaaggc ataagcatcg ccctccccct ttccgttgcc
    62161 ggtttgagta gcgccacgct ggtgaatgat ctgcttgagc agctgggaaa tagccctcta
    62221 ccaccacggt tattacatct gattattccg gctgaagcga ttttagatca cgcagaaagc
    62281 gtgcaaaaac tgcggctggt gggatgtcgg atagtgctca gccaggtggg ccgcgatctg
    62341 caaatcttca actcgctgaa agcgaatatg gcagattacc tgctacttga tggtgagtta
    62401 tgcgccaacg tgcagggtaa tttgatggat gagatgctga ttacgattat tcaggggcac
    62461 gctcagcgac tcgggatgaa aaccatcgcc gggccagtcg ttttaccctt agtgatggat
    62521 acgctttctg gcatcggcgt cgatctgatt tatggtgatg tgattgccga tgcccaaccg
    62581 ctggatttgc tggtgaatag cagttatttc gcgattaact gagagagcgt ttgcccattg
    62641 cctgatgcga cgtatcaggc ctacaattcg tccgttccgt ctggttgcca gccttccgta
    62701 taccagatat gcaacagcgc ataagaacgc caaggcttcc agcgctcggc ataacggcgg
    62761 atttgtgccg gtgtcatccc cggaaatcgc tgtttaatca gataatcatc cggcagaaaa
    62821 acatctttcg cctgccagcc acgcaaagcg aaataattcg ccgtccagcg cccgataccc
    62881 ggaaaagttt gcagcgtttt catcgcctgc tccacatcgc ccggaattgt cattggtaag
    62941 ctgccctcca gcgccgcatt tgccagatga atcagtgcct ctgcccgttt caacggcatg
    63001 cctaacgctt ttaatgcctg cgggtcggct gctgccagcc gctgaggcgt ggggaagcag
    63061 atatactccg gaaaatcatc cagccgttcg ccataaagct gtacaacttt ggcagtcaat
    63121 tttgccgcca tcgccacgct caccagttgg cctaaaatcg cccgcacacc ctgctcaaaa
    63181 gcatcaatac agccgggtaa acgcaatccg ggccgcgccg cgcctaactt gcccaacgca
    63241 ccgttaacaa tctgcgggtt acattgcaga tcaaacaggc ggctcatttt cgccagacac
    63301 tcagcggcaa cgggttctaa acctgcactt aaatttatgt gcagagtatg gcgggctata
    63361 tccggaatag cagtcaccac gccgcgatat tcgcccaccg ccagactacg ggcataataa
    63421 tcgtcagcga ccgtttccac accactcact gcacgggcgg cgagaaatcc caacatccac
    63481 gaccagtcat acggcggctg ccagttcagg gtatacatcg catctcctta ttcatccgct
    63541 ttcagcataa acgttattca gacgctacgc tttgctttca tattccggtt gtcgcgacgg
    63601 caacatttcg ctaaagtcac gccccttctt caccggcatg gggattattt cgtgtttatt
    63661 ggttttgatt acggtacagc aaactgttca gtggcggtca tgcgtgacgg taaaccgcac
    63721 ttgctaaaaa tggaaaacga cagcacgctg ctgccttcaa tgctttgcgc gccaacgcgt
    63781 gaagcggtaa gcgaatggct gtaccgccat catgacgttc cggcagacga cgatgaaacg
    63841 caggcgttgt tacgacgggc gattcgttat aaccgcgaag aagatatcga tgttacagcg
    63901 aaaagcgtgc agttcggtct ttcctcactg gcacagtaca ttgatgatcc agaagaagtg
    63961 tggtttgtga aatcaccaaa atcgttcctc ggtgccagcg gcttaaaacc gcagcaggta
    64021 gcgctgtttg aggatctggt ctgcgcaatg atgttgcaca ttcgccagca ggcgcaggcg
    64081 cagctgccag aagcgattac tcaggcggtg attggtcgcc cgatcaactt ccaggggctg
    64141 ggcggcgatg aagcaaacgc ccaggcgcaa ggaattctgg aacgcgcggc gaagcgtgcc
    64201 ggattcaggg acgtggtatt ccagtatgag ccggtcgcgg ctgggctgga ttacgaagcc
    64261 accttgcagg aagaaaaacg ggtgctggtg gtggatatcg gtggtggtac gactgactgt
    64321 tcattgctgc tgatgggacc gcagtggcgt tcgcgtctcg atcgtgaagc cagcctgctg
    64381 ggtcacagtg gttgtcgtat tggcggtaac gatctggata tcgccctggc gtttaaaaac
    64441 ctgatgccac tgctgggtat gggtggcgaa accgaaaaag gcatcgccct gccgatcctg
    64501 ccgtggtgga atgcggttgc catcaacgac gtacctgcgc agagtgattt ctacagtagt
    64561 gccaacggtc gtctgcttaa cgatctggta cgcgatgccc gcgaaccgga aaaagtggcc
    64621 ctgttacaga aagtctggcg tcagcgttta agctatcgcc tggtacgcag cgcagaagag
    64681 agcaaaatcg ccctttcaaa cgctgcggaa acccgcgcct cactgccgtt tatcagcgat
    64741 gaactggcta cgctgattag ccagcaaggg ctggaaagcg ccctcagcca gccactggcg
    64801 cggattctgg aacaggtgca actggcgctg gataacgccc aggaaaaacc ggacgttata
    64861 tacctgaccg gcggtagcgc ccgttcgccg ctgattaaaa aggctctggc agaacagttg
    64921 ccgggcattt cgattgcagg cggcgatgac tttggctccg tcaccgccgg gctggcacgc
    64981 tgggcggaag tggtatttcg ttaaaagaaa atggctcagc agcggcttaa atctgcctgc
    65041 gcctgagcca gtttttctgc cgcctgacgt aacggttcca tcaacggcat ggtccgtgct
    65101 ggagcataaa ggcggaatcg ctgcaactct gtcgcgccga cagtcaacgc cgattccagc
    65161 cgatgtcgtt tggcggccat taccgcctgt ctgtctgctg gcgttaccgc ttcgttcggc
    65221 ctgaacacaa aacggcggtc acagctcgct ttccagtcga taaccgcctg ggtcagatgg
    65281 tcgccaaacc ctttaacttg cttaacgcca cgacgggtaa catccgctgc tgtttcaata
    65341 ccaaaagacc gtaacgccgc tttacgcgca gggccaacgc cgggaataga ggcaaaaaat
    65401 ccctccagaa acttctgctt ctgccgttcc cttgcggtgt cataaagtgc tgccagagcg
    65461 cgtttctcct cttccggtaa cccgagaatt tcgtccttca ttttttcgag catcgcccgt
    65521 ttggcgataa aaccttccag cccgcccaac tgttggatct ggctgactaa atgctcatag
    65581 tccattttcg cgcgattaaa tgcctcacgg cgttgctgga tttctgcttt gtacgctttg
    65641 cttgtcagac tgccaataat ccagatagcc gacagcacag gaaccaaaat aatataacgc
    65701 ggttctgcct gaaggccgca aagcaacagc gataacgctg acagtgcgat ctcaatcaga
    65761 atgatgtatt cgcgccgtaa caggcctaaa ggaagcggcc tgccagtcgg ttggaaatga
    65821 tcgggtaatg gcaattgcaa tgctggcggt gctactgacg ccatcaccat cgcccagact
    65881 ttcgccagca caaaatcacc gctggtggta atgacctctt caccgagatc aacaaaatag
    65941 ataacgcctt gattatccag cgtacaccac gggcagtcgg tcaaatgagc gggataaaca
    66001 tgcattgccg aaacgggaca tttctttaac tgttggcgca gagaatcaag tgccgctacc
    66061 cacgctttag ccgtcggacg cccggttgcc acgccacttt ccgtgaatgc ctgctgaaac
    66121 atggcttcaa catcactcgg taacatcgat agcggaatcg atcgtggcgg cggttttaaa
    66181 ccacgtcgct gattatctga cgcgtaggca taacggaaat gggtaatatc cgtctccagc
    66241 gcattacccg catcagagat aagcggcaca ccagaataag gatgccggcc accaaacaag
    66301 acgtgaaaaa tcagcaacgc aaggccaaaa ttatcgtgat tttctgtgcg ttcaaagccg
    66361 acaaatgacg acaaggtttg tagctctggc ggcgtaaaat gcgacacgcc gacttcgcat
    66421 aaatgcagtg tgccattgac gttaatctga aaggagtcgc tatcaatcag taccactttg
    66481 ctgtcgcgac ctaccataaa actgttctgg tttacgtcac ccacgacgtg cccgtgctcg
    66541 tgaaccgtag caaaagatga agcaatattg cgcgcaacat agagtagaaa atcccacgca
    66601 caatgagggt aactctggcg acgatgtgcc gggctataga tcatatgaat cggttcttta
    66661 ccagaaactt ttggcatcat aaaaccgata acttttccgc ctcgtccacc gtgaagcgtt
    66721 gcctgcggcc aggcgacata attcaacaac tgcgcgtcag ctgtcgcagc cataaaggca
    66781 agtttgtcct gttttgaggc gggtggcggc gtgtgataaa tcttggcgac gctatcgaca
    66841 aactcctcga tatcataaac cgcgccttca ccgcctttgc ccagttcacg gcctggcgta
    66901 acgcactcac cagtagcagt atataaagtg ggtttcatgg taaccacagc gccagtgcca
    66961 acgttttatc atcatccgta cgctcgttta ccgccgggct ggacaaaaac tgctttaaca
    67021 attcaggtaa taaatcgagt tgttcctgcg ttactgacgc cagtccattg aaaaacgggg
    67081 taaagaaagg cacatgagga gaattatcca gcatatttaa cgccagccgc tgaataccat
    67141 ccgtaaatgc tgcaacttta tgcgcacgcc cagtgctggt gaaagtttcc agtctggaaa
    67201 cggcatcttc gtcggtaatg aagtgcgtca tgttggcata ttcacccacc atcggcgtga
    67261 gaggcaattg cagaccgtga cccaaatcta ccaccacgcc gccatcgcca atctgcataa
    67321 tcaaggtgcc gtcaggcgat gaaatcaatc ccagaaacgt gcaggcaaaa tcgcgaactg
    67381 ctaatgcttt ggcttctgcc tcggcaaaaa gtcgttgacg aatagtcagt accatatttg
    67441 tggcgaggac atcattaagc cccaattcac cgtcctgtac tttttgcacc ataaacgcca
    67501 tcgcttcatt gacggcgagc gtcgcgcctt ctcctccctg cgaaacgcta cctgcgccat
    67561 cagcaaggaa catcaccagt aatggttgct ggtcgtttaa ccagacaacc tgcatctggc
    67621 aggcatcctg acaaggcaaa tcagcactaa tgtgcgatgt tccaacagcg gatgcataaa
    67681 ccagacgcca gctcacactg acgtccagcc ttttggcgct tccagcacaa cttccgttcc
    67741 cggcgtggag cgggaaaccg aacgcagcga actggataac cagctaaaca gttcacggaa
    67801 ttgtaatccc tgcagtggca aaggctgacg aacgctgatt tgtgccagag tcttcatatc
    67861 cgccccctga acaccgatgg aaaagaaggc aaacttctta tcttcttccc cctgaaacac
    67921 tttgttggcg gcagcctgcc actcatcggt tggagcgcca tcggtgatca ggaaaatcca
    67981 cgggcgataa tacgaaatac catttgcgcg gtactcacgt ttcctctctt caaccatatc
    68041 tagggctttg gtaatggcgg cccccatagg cgtatccccc tgggcaaaca ggatgggcgg
    68101 gaaaaagtta gcggcgctgg taaagggttg ttccacatgc accgggccga acgtcacaat
    68161 gccgagttcc actcttttta aagccagcgg atcagcaagc agttcatcac gaaaggtaac
    68221 caatccggcg ttaagttcat taataggtct gccgctcatc gagccagaaa catccagcag
    68281 caaaatgcag gggcaacgtg gttccgggtt actggcaaaa tcgctggtgg caaacgtgat
    68341 ttgttcgctc ataagaaatc ctttcttaga gaattatcga ggtccggtat cataccgatt
    68401 gcaataatga aataagagca aacgaagaaa ctttcagaat taggcccgtc ggcgcagaaa
    68461 attttgctat tcgcctcgca agaacggaga gccgtcgatt gacactaagg gcggagtgac
    68521 ataatttcag gagtgagggt tagggagagg tttccccctc cccctggtgt tcttagtaag
    68581 cctggaagct aatcactaag agtatcacca gtatgatgac gtgcttcatc ataacccttt
    68641 ccttattaaa agccctcttc tccgggagag gctttcccgt ttcagcgtcc cgctgaaatc
    68701 atcggcttac ctcctttcgc cctgaatgca gtctatcgct aacgcgtgaa taaaatagtt
    68761 tcctctgtga ttattgcgta acgactcgca aagaatattt gctggcagga tcgcagacta
    68821 caaagcctac ggattgacaa tcttatcgtg aaggcatact ttcaggagtg agggtagagc
    68881 ggggtttccc ccgccctggt agtcttagta agcggggaag cttatgacta agagcaccac
    68941 gatgatgagt agcttcatca tgaccctttc cttatttaag gccccttcct cgggaggggc
    69001 tttcccgttt cagcgtcccg ctgaaatcgt cggcttacct cctttcgccc tgtatgcagt
    69061 ctatcgctga cttgcggata aaatagtttc cagtgtgatt attgcgtaac gtctcgcaaa
    69121 gaatatttgc tggcaggatc gcagactgca aagcctgcag attgacaatc ttatcgtgaa
    69181 ggcatacttt caggagtgag ggtagagcgg ggtttccccc gccctggtag tcttagtaag
    69241 ctggccagct aatgactaag agcaccacga tgatgagtag cttcatcatg accctttcct
    69301 tatttatggc cccttcctcg ggaggggctt tcccgtttca gcgtcccgct gaaatcggcg
    69361 gcttacctcc tttcgccatg caagcagtct atccctaacg cgtagataaa atagtttcct
    69421 gtgttattac tggatgcgtg ctcgcaaatg tgcccgtcat tcagacaatt cccgacagtg
    69481 tttcataatt cctccatttt tctcccttat tggctggcta cactagtatc attccgcgaa
    69541 acgtttcagg aagagaaact cttaacgatg aaaggcagtt ataaatcccg ttgggtaatc
    69601 gtaatcgtgg tggttatcgc cgccatcgcc gcattctggt tctggcaagg ccgcaatgac
    69661 tcccggagtg cagccccagg ggcgacgaaa caagcgcagc aatcgccagc gggtggtcgc
    69721 cgtggtatgc gttccggccc attagccccg gttcaggcgg cgaccgccgt agaacaggca
    69781 gttccgcgtt acctcaccgg gcttggcacc attatcgccg ctaatactgt tacggtgcgc
    69841 agccgcgtgg acggtcaact gatggcgtta catttccagg aaggccagca ggtcaaagca
    69901 ggcgatttac tggcagaaat tgaccccagc cagttcaaag ttgcattagc acaaacccag
    69961 ggccaactgg caaaagataa agccacgctt gctaacgccc gccgtgatct ggcgcgttat
    70021 cagcaactgg caaaaaccaa tctcgtctcc cgtcaggagc tggatgccca acaggcgctg
    70081 gtcagtgaaa ccgaaggcac cattaaggct gatgaagcaa gcgtcgccag cgcgcagttg
    70141 caactcgact ggagccgcat caccgcacca gtcgatggtc gcgttggtct caagcaggtt
    70201 gatgttggta accaaatctc cagtggtgat accaccggaa ttgtggtgat cacccagacg
    70261 catcctatcg atttagtctt taccctgccg gaaagcgata tcgctactgt agtgcaggcg
    70321 caaaaagccg gaaaaccgct ggtggtagaa gcctgggatc gcaccaattc gaagaaatta
    70381 agtgaaggca cgctgttaag cctcgataac caaatcgatg ccacaaccgg tatgattaaa
    70441 gtgaaagcac gctttaataa tcagaatgat gtgctgtttc ccaatcagtt tgttaacgcg
    70501 cgcatgttag tcgacaccga acaaaacgcc gtagtgatcc caacagccgc cctgcaaatg
    70561 ggcaatgaag gccattttgt ctgggtgctg aatagcgaaa acaaggtcag caaacatctg
    70621 gtgacgccgg gcattcagga cagtcagaaa gtggtgatcc gtgcaggtat ttctgcgggc
    70681 gatcgcgtgg tgacagacgg cattgatcgc ctgaccgaag gggcgaaagt ggaagtggtg
    70741 gaagcccaga gcgccaccac tccggaagag aaagccacca gccgcgaata cgcgaaaaaa
    70801 ggagcacgct cctgatgcag gtgttacccc cgagcagcac aggcggcccg tcgcgcctgt
    70861 ttattatgcg tcctgtcgcc accacgctgc tgatggtggc gatcttactc gccgggatta
    70921 tcggttatcg cgccctgccc gtttcggcgc tgccggaagt ggactatccg accattcagg
    70981 tggtcacgct ctacccaggt gccagcccgg atgtcatgac ctctgccgtt accgcgccgc
    71041 tcgaacgcca gttcgggcag atgtctggcc tgaaacagat gtcgtcgcaa agttccggcg
    71101 gtgcgtcagt tatcactttg cagttccagc taacattacc gctcgatgtc gccgagcagg
    71161 aagtgcaggc cgcgattaac gctgcgacca acttgttgcc gagcgatctg cctaacccgc
    71221 cggtttacag caaagtgaac ccggcagatc cgccgatcat gacgctcgcc gtcacctcaa
    71281 ccgccatgcc gatgacgcaa gtggaagata tggtggaaac ccgcgtcgcg cagaaaatct
    71341 cgcagatttc cggcgtcggc ctggtgacgc tttccggcgg tcagcgtccg gctgttcgcg
    71401 tcaaacttaa cgctcaggcg attgccgccc tcggcctgac cagcgaaacc gtgcgcaccg
    71461 ccattaccgg cgctaacgtt aactcggcaa aaggtagcct cgacggccct tcccgtgcgg
    71521 tcacgctttc cgcgaacgac cagatgcaat ccgccgaaga gtatcgccag ctaatcatcg
    71581 cctaccagaa cggcgcgcca attcgtctgg gcgatgtcgc aactgtagag caaggtgcag
    71641 aaaacagctg gctcggcgcg tgggcgaaca aagaacaggc cattgtgatg aatgttcagc
    71701 gccagcccgg tgctaacatt atctccaccg ccgacagcat tcggcagatg ctgccacagc
    71761 tcactgagag tctgccgaaa tcggtgaagg tgacagtgct ttccgatcgc accaccaata
    71821 tccgcgcatc cgtcgatgat actcagtttg aattgatgat ggctatcgcg ctggtagtca
    71881 tgattatcta cctgtttttg cgcaatattc cggcgaccat cattcccggt gttgctgtac
    71941 cgctgtcgtt aatcggcact ttcgcggtta tggtgtttct cgatttttca atcaataacc
    72001 tgacactgat ggcgttaact atcgccaccg gattcgtggt cgatgacgcc atcgtggtga
    72061 tcgaaaacat ttcccgctat atcgaaaaag gcgaaaaacc gttggcggcg gcgctcaagg
    72121 gcgcaggtga aatcggcttt accattatct cgctgatctt ctcactgatt gcggtgttga
    72181 tcccactgct gtttatgggc gatatcgtcg ggcgactgtt ccgcgaattt gctattaccc
    72241 tggcggtagc gattttgatc tcagcggtgg tgtcgctgac cctgacaccg atgatgtgcg
    72301 cgcggatgct cagccaggag tcgttgcgta aacagaaccg cttctcccgt gcctcggaaa
    72361 aaatgttcga caggataatc gccgcctatg gtcgtggact ggcgaaagtg ctgaatcatc
    72421 cgtggctgac cttaagcgtg gcactcagca cgctgctgct tagcgtgctg ctgtgggtgt
    72481 tcattccgaa aggtttcttc ccggtacagg acaatggcat tattcagggc actttgcagg
    72541 caccgcaatc cagctccttt gccaatatgg cccagcgaca acgccaggtc gcggacgtga
    72601 ttttgcagga tccggcagtg caaagcctga cctcatttgt tggcgttgat ggcactaacc
    72661 cgtcgctgaa tagtgcacgt ttacaaatca acctcaaacc gttggatgaa cgtgatgatc
    72721 gggtgcaaaa agtcatcgcc cgtctgcaaa cggcggtaga taaagtgccg ggcgtcgatc
    72781 tcttcctgca accaacgcag gatctgacta ttgatactca ggtcagccgc acccagtacc
    72841 agtttacctt gcaggccacc tcactggatg cgctcagtac ctgggtgcca cagttgatgg
    72901 aaaaactcca gcaactgcca cagctttctg atgtctccag cgactggcag gacaaagggc
    72961 tggtggcgta tgtcaatgtt gatcgcgaca gcgccagccg tctggggatc agcatggcgg
    73021 atgtcgataa tgccctgtac agtgcgtttg gtcagcgact gatttccact atttatactc
    73081 aggctaacca gtatcgcgta gtgctggagc acaacaccga aattaccccg ggcctcgcgg
    73141 cgctggatac cattcgcctg accagtagcg acggcggcgt ggtgccgtta agctcaattg
    73201 ccaaagttga acagcgtttt gcgccgcttt ccatcaacca tctggatcag ttcccggtaa
    73261 cgaccatctc ctttaacgtg ccggataact attcgctggg cgatgcggtg caggcgatta
    73321 tggacaccga aaagacgctg aatctgccgg tggatatcac cacgcaattc cagggcagca
    73381 ccctcgcctt ccagtcggcg ctgggcagca ctgtctggct gattgtcgcg gcggtggtgg
    73441 cgatgtatat cgtgctcggc attctgtacg agagctttat tcacccgatc accattctct
    73501 cgacgctacc caccgcaggg gtcggcgcgc tgctggcatt aatgattgcc ggtagcgaac
    73561 tggatgtgat tgcgattatc ggcattattt tgctgatcgg tattgtgaag aagaacgcca
    73621 tcatgatgat cgacttcgcg ctggctgctg agcgcgagca aggcatgtcg ccgcgcgatg
    73681 caatctacca ggcttgtctg ttgcgttttc gtccgatcct gatgaccacc ctggcggctc
    73741 tgcttggcgc gctgccgctg atgttgagta ccggggtcgg cgcggaactg cgtcgtccgt
    73801 taggtatcgg catggtcggc ggtctgattg tcagccaggt gctgacgctg ttcaccacgc
    73861 cggtgattta tctgctgttc gaccgcctgg cattgtggac caaaagtcgc tttgctcgcc
    73921 atgaagagga agcgtaagtg aagttttttg ccctcttcat ttaccgtccg gtggcgacga
    73981 ttttactgtc ggttgccatt accctgtgcg gcatactggg cttccgtatg ctgccggtcg
    74041 ccccgctgcc gcaggtcgat tttccggtga ttatggtcag cgcctcgctg cccggtgcgt
    74101 caccagaaac aatggcgtct tccgttgcca cgccgctgga gcgctcactt gggcgcattg
    74161 ccggagtcag tgaaatgacc tccagcagtt cgctcggcag cacgcgtatt attttgcagt
    74221 ttgattttga ccgggatatc aacggcgcgg cgcgcgatgt gcaggcggcg atcaacgctg
    74281 cacaaagttt gctgcccagc gggatgccca gccgtccgac ctatcgcaaa gctaacccgt
    74341 cggatgcgcc aattatgatc ctcacgctga catccgatac ttattcgcag ggtaaactgt
    74401 acgatttcgc ctcgacgcag ctggctccga cgatttcgca aatcgacggt gttggtgatg
    74461 tcgatgtcgg cggcagctca ctgcccgccg tacgcgtcgg gctgaatccg caggcgctgt
    74521 ttaatcaggg cgtctcgctg gacgacgtac gcactgccat cagcaatgcc aacgtgcgta
    74581 aaccgcaggg ggcgctggaa gatggcactc accgctggca gatccagacc aatgatgagc
    74641 taaaaaccgc cgccgaatat cagccgctga ttattcatta caacaacggc ggcgcggttc
    74701 gtctgggcga tgtggcgaca gtgaccgact ctgtacagga tgtacgtaac gccgggatga
    74761 ccaatgccaa accggctatt ttgctgatga tccgcaagct gccggaagcc aatattatcc
    74821 agacggttga cagcatccgg gcaaaattac cggagttgca ggaaaccatt ccggcggcga
    74881 ttgatctgca aattgctcag gatcgctccc ccaccattcg cgcctcgctg gaagaagtcg
    74941 agcaaacgct gattatctcg gtggcgctgg tgattctggt ggtgttttta ttcctgcgct
    75001 cgggtcgcgc aactattatt cccgccgttg cggtgccggt ttcgctgatt ggtacgtttg
    75061 cggcgatgta cctgtgcggt ttcagtctca ataatctttc gttaatggcg ctcaccatcg
    75121 ctactggttt cgtggtggat gacgccatcg tggtgctgga aaacattgcc cgtcatctgg
    75181 aagcgggaat gaaaccgttg caagccgcac tgcaaggtac tcgcgaagtc ggttttacgg
    75241 tgctgtcgat gagtctgtca ctggtggcgg tgttcctgcc gctgctgttg atgggcggat
    75301 tgccgggccg actgttacgc gaatttgccg tgacgctttc tgtcgccatt ggtatatcgt
    75361 tgctggtttc tctgacatta acgccaatga tgtgtggctg gatgctgaaa gccagcaagc
    75421 cgcgcgagca aaagcgactg cgtggttttg gtcgcatgtt ggtagccctg caacaaggct
    75481 acggcaagtc actgaaatgg gtgctcaatc atacccgtct ggtgggcgtg gtgctgcttg
    75541 gcaccattgc gctgaatatc tggctgtata tctcgatccc gaaaaccttc ttcccggagc
    75601 aggacactgg cgtgttgatg ggcgggattc aggcggatca gagtatttcg tttcaggcga
    75661 tgcgcggtaa gttgcaggat ttcatgaaaa ttatccgtga cgatccggca gtggataatg
    75721 tcaccggctt tacaggcggt tcgcgagtga acagcgggat gatgtttatc accctcaagc
    75781 cacgcgacga acgcagcgaa acggcgcagc aaattatcga ccgtctgcgc gtaaaactgg
    75841 cgaaagaacc gggggcgaat ctgttcctga tggcggtaca ggatattcgc gttggtgggc
    75901 gtcagtcgaa cgccagctac cagtacacgt tgttatccga cgacctggcg gcactgcgag
    75961 aatgggagcc gaaaatccgc aaaaaactgg cgacgttgcc ggaactggcg gacgtgaact
    76021 ccgatcagca ggataacggc gcggagatga atctggttta cgaccgcgac accatggcac
    76081 ggctgggaat cgacgtacaa gccgccaaca gtctgttaaa taacgccttc ggtcagcggc
    76141 aaatctcgac catttaccag ccgatgaacc agtataaagt ggtgatggaa gtggagccgc
    76201 gctataccca ggacatcagt gcgctggaaa aaatgttcgt tatcaataac gaaggcaaag
    76261 cgatcccgct gtcgtatttc gctaaatggc aaccggcgaa tgccccacta tcggtgaatc
    76321 atcagggatt atcggcggcc tcgaccattt cgtttaacct gccgaccgga aaatcgctct
    76381 cggacgccag tgcggcgatc gatcgcgcaa tgacccagct tggggtgcct tcgacggtgc
    76441 gcggcagttt tgccggcacg gcgcaggtgt tccaggagac gatgaactcg caggtgatcc
    76501 tgattatcgc cgccatcgcc acggtgtata tcgtgctggg tatcctttac gagagttacg
    76561 tacatccgct gacgattctc tccaccctgc cctcggcggg cgttggagcg ctgttggcgc
    76621 tggagctgtt caatgccccg ttcagcctaa tcgccctgat agggatcatg ctattaatcg
    76681 gcatcgtgaa gaaaaacgcc attatgatgg tcgattttgc gcttgaagcc caacggcacg
    76741 gtaacctgac gccgcaggaa gctattttcc aggcctgtct gctgcgtttt cgcccgatta
    76801 tgatgaccac cctggcggcg ctgtttggtg cgctgccgct ggtattgtcg ggcggcgacg
    76861 gctcggagct gcggcaaccc ctggggatca ccattgtcgg cggactggta atgagccagc
    76921 tccttacgct gtataccacg ccggtggtgt atctcttttt cgaccgtctg cggctgcgtt
    76981 tttcgcgtaa acctaaacaa acggtaaccg agtaaatgac agatcttccc gacagcaccc
    77041 gttggcaatt gtggattgtg gctttcggct tctttatgca gtcgctggac accaccatcg
    77101 taaacaccgc ccttccctca atggcgcaaa gcctcgggga aagtccgttg catatgcaca
    77161 tggtcattgt ctcttatgtg ctgaccgtgg cggtgatgct gcccgccagc ggctggctgg
    77221 cggacaaagt cggcgtgcgc aatattttct ttaccgccat cgtgctgttt actctcggtt
    77281 cactgttttg cgcgctttcc ggcacgctga acgaactgtt gctggcacgc gcgttacagg
    77341 gcgttggcgg cgcgatgatg gtgccggtcg gcagattgac ggtgatgaaa atcgtaccgc
    77401 gcgagcaata tatggctgcg atgacctttg tcacgttacc cggtcaggtc ggtccgctgc
    77461 tcggtccggc gctcggcggt ctgctggtgg agtacgcgtc gtggcactgg atctttttga
    77521 tcaacattcc ggtggggatt atcggtgcga tcgccacatt gctgttaatg ccgaactaca
    77581 ccatgcagac gtggcgcttt gatctctccg gatttttatt gctggcggtt ggcatggcgg
    77641 tattaacccc tggcgctgga cggcagtaaa ggtacaggtt tatcgccgct ggcgattgct
    77701 ggcctggtcg cagttggcgt ggtggcactg gtgctttatc tgctgcacgc cagaaataac
    77761 aaccgtgccc tgttcagtct gaaactgttc cgtactcgta ccttttcgct gggcctggcg
    77821 gggagctttg ccggacgtat tggcagtggc atgttgccct ttatgacacc ggttttcctg
    77881 caaattggcc tcggtttctc gccgtttcat gccggactga tgatgatccc gatggtgctt
    77941 ggcagcatgg gaatgaagcg aattgtggta caggtggtga atcgctttgg ttatcgtcgg
    78001 gtactggtag cgaccacgct gggtctgtcg ctggtcaccc tgttgtttat gactaccgcc
    78061 ctgctgggct ggtactacgt tttgccgttc gtcctgtttt tacaagggat ggtcaactcg
    78121 acgcgtttct cctccatgaa caccctgacg ctgaaagatc tcccggacaa tctggcgagc
    78181 agcggcaaca gcctgctgtc gatgattatg caattgtcga tgagtatcgg cgtcactatc
    78241 gccgggctgt tgctgggact ttttggttca cagcatgtca gcgtcgacag cggcaccaca
    78301 caaaccgtct ttatgtacac ctggcttagc atggcgttga tcatcgccct tccggcgttc
    78361 atctttgcca gagtgccgaa cgatacgcat caaaatgtag ctatttcgcg gcgaaaaagg
    78421 agcgcgcaat gaagttctgg cgacccggta ttaccggcaa actgtttctg gcgattttcg
    78481 ccacctgcat tgtcttgctg atcagtatgc actgggcggt gcgtatcagt tttgagcgtg
    78541 gctttattga ttacatcaag catggtaatg aacagcgatt acaactgtta agtgatgcgc
    78601 ttggcgagca gtatgcgcag catggcaact ggcgcttcct gcgcaacaat gatcgctttg
    78661 tctttcagat cctgcgttca tttgaacacg ataattcgga agataaaccc ggcccgggta
    78721 tgccaccgca cggctggcgt acccagttct gggtggttga tcaaaacaac aaagtgctgg
    78781 ttggtccgcg agcgccgatt ccacctgacg gtacacggcg acccattctg gtcaacggtg
    78841 cggaagttgg cgcggtgatc gcctcccccg ttgagcggtt aacgcgcaat actgatatca
    78901 atttcgataa acaacagcgg caaaccagct ggttgattgt cgccctggca acgttactcg
    78961 cggcacttgc cacttttctg ctggcgcgcg gtttactggc accggtaaaa cgacttgtcg
    79021 atggcacgca caaactggcg gcgggcgatt tcactacccg cgtaacgccc accagtgaag
    79081 atgaactggg caaactggcg caagacttca accagcttgc cagcacactg gagaaaaacc
    79141 agcaaatgcg gcgcgatttt atggccgata tttctcacga actgcgtacg ccattagcgg
    79201 tgctgcgcgg tgaactggaa gccattcagg atggcgtgcg taaattcacg ccggagacgg
    79261 tggcgtcttt acaggcggag gtcggtacac tgaccaaact ggttgacgat ctccatcagt
    79321 tgtcgatgtc tgatgaaggc gctctcgcct atcaaaaagc accggtagat ttgatcccac
    79381 tgctggaagt ggcgggcggc gcatttcgcg aacgattcgc cagtcgtggc ctgaaactgc
    79441 aattttccct gccagacagt attaccgtat ttggcgatcg cgaccgttta atgcagttat
    79501 tcaataattt acttgaaaac agcctgcgct atactgacag cggcggcagc ctgaaaatct
    79561 ctgccgagca gcacgacaaa acggtgcgcc tgacctttgc cgacagtgcg ccaggtgtca
    79621 gtgacgagca gctacaaaaa ttatttgaac gtttttatcg caccgaaggt tcccgcaacc
    79681 gcgccagcgg tggttccggg ctggggctgg cgatttgcct gaacattgtt gaagcacata
    79741 atggccgcat tattgctgcc cattcgcctt ttggcggggt aagcattaca gtagagttac
    79801 cgctggaacg ggatttacag agagaagtat gaccgagtta ccaatcgacg aaaacacacc
    79861 acgtattttg atcgtggaag atgaaccgaa gctggggcag ttgctcattg attatctgcg
    79921 tgctgcgagc tatgcgccga cgcttatcag ccacggcgat caggtactgc cgtatgtgcg
    79981 ccagacacca ccggatctga tcctgttgga tctgatgctc cctggcaccg atggcttgac
    80041 gctgtgccgg gaaattcgtc gtttttctga cattcctatc gtgatggtga cggcaaaaat
    80101 cgaagagatc gaccgcctgc tcggactgga gattggcgca gatgactaca tctgcaagcc
    80161 gtacagccca cgggaagtgg tagcgcgcgt caaaaccatt ttgcgccgtt gcaaaccgca
    80221 gcgcgaattg cagcaacagg atgccgaaag cccgttgatt atcgacgaag gtcgttttca
    80281 ggcttcatgg cgcggtaaaa tgcttgacct gacacctgcg gaatttcgtc tgttgaaaac
    80341 gctctctcat gaaccaggaa aagtgttctc ccgcgagcaa ttgctcaatc atctttatga
    80401 cgactaccgc gtagtaaccg accgcaccat tgacagccac attaaaaacc tgcgccgcaa
    80461 gctggaatct ctcgacgccg aacagtcatt tatccgcgcc gtttacggcg ttggttaccg
    80521 ctgggaagcc gacgcctgcc gcatcgttta gttttagcga catgactttg ttagccggag
    80581 atggcgttca gaccagatcc ggcaacatta tcccacgcat ggtcagcaaa ctgacattat
    80641 ctctccgccc tggcaggcat cagaaaatcg ctcatacttt aatcggtaaa cagcaccttt
    80701 agatgctgtt ttcgatacgc aatttcaatc aaggagtcat tatggctggt tggtttgaac
    80761 tcagtaagag cagtgataat cagttccggt ttgtgctaaa agcgggcaat ggtgagacta
    80821 tcctcaccag cgagctgtat acatcaaaag cctctgcgga aaagggcatc gcgtcagtgc
    80881 gtagcaacag cccgcaagaa gaacgctatg agaaaaaaac ggcaagtaac ggcaaattct
    80941 atttcaatct gaaagccgcc aatcatcaaa ttatcggctc cagccagatg tacgccaccg
    81001 cgcaatctcg tgaaaccgga attgcctccg ttaaagccaa tggcacaagc cagacggtga
    81061 aagacaatac gtaattacga tgccgggcgt gggttgttgg cgtccggctt tattttctct
    81121 catcacagag ttactatccc tcaagaaatt attaaccatg aaatgagttt tctcctcata
    81181 actgataagg aaaattatgc tcaaaggatt gcgtacatta ttttcacgca gggttttgtt
    81241 taacgtcgaa atgaataatt ctgttgactg tgaattactt ctcatccagc aacaactcca
    81301 ggcattgata gccgaaccag gcaattattt agcacatgat tgtgatctca acgatactct
    81361 ggttctttgc cagcttaccc atcatcacaa tggatatata cgagaaaagg ccgtgcagta
    81421 tctggggcac aaagaggatg ttgcggctat agaagaatta ttacttgcag ctaatgactg
    81481 ggtaaaagag gttcgccttg ctgcaaccat agcattacgt catttaatga aggataagaa
    81541 tgcagcggca tttgccgtta atctacccat gatacgtaac cttctccaat gccagcgtta
    81601 cgatcaccgt gcatttgtag acgagatact tagatattta ttgacagaaa ataaccgccc
    81661 acaattaacg tattggctta cttgccctga taaaaagctc tcccgcgcgg tattacaaac
    81721 gctgattgaa tacggttact ttaatgatga atcttcactg ctttcaatac tcgataaacc
    81781 cgatgagggt ttgcgaatgc tggcgaccac ccactggctg cgtcaacaat taccattaag
    81841 cgaagcggta ttaactcgtc tgttaaaaga ccgctggccg cgtattcgac aagcaacgtt
    81901 atttagcctc actgaccgag caatagaaat gcctccggcg ttgcacagca cattactgct
    81961 ggataacaat atgttgatcc gcctacgcgc taaaaatatg cttcacgaag tcatggatgt
    82021 tccgcaattc tggcgtcatg ttgtcacttc tgcggaatat actccctcac agcgacgggc
    82081 cgctttatac gggctggatt ccattcatga tcccaatatt ttaaaactgg cagaatgggg
    82141 attatcacag aatgtattcc cactgcgttt agccgctatg cacattcttg caaaagctaa
    82201 tcctcgttgt ggcgtcaaag agactattct gaccacgctg gctaacccgg acgccgccgg
    82261 gttgcgattt atggttaaca tctgtgtatg gtgtcgcgtt ccgctcacgt tcgaggaaat
    82321 acgtcagttg caggaaaacg cgccgtcagt taaacatgct tgcgcatatt gtcggctgta
    82381 tcataacttg aacaaatggg acggtttaat tcttcttctt caatcgcaac acaagctaac
    82441 tgaagaattt gcaggtaaac agctcgcgat atggcaacgc aatttcaatc tttcgggcat
    82501 tcaaccgaat gctcttcagc gtcagcaact tcaggcgctt tttacccgca atccggaact
    82561 tcacaacaga ttatggggtt acattccttt taaataactt cgaattatag acttacgatg
    82621 acaaatgtac ctgctgacga gcggaaccaa aacgaaacaa tacgtgaagc tttacgcttg
    82681 ctacgagaaa aacttgccga gggactacgc agtggcgaag cccaaccgtg ggaaaaggat
    82741 ctgtttttac ataaagtgaa ggccggtaac aaataaatcc cccagtcttt tccctcacat
    82801 ttgcactgga gccaaccccg ccgattgcgc tacaatgccc gcccttaaag tgggggcact
    82861 cccctaaccg cttcatcagg tgaagcggat ctgacctgtc atcagaacga gagaattatg
    82921 tttaaaccgg aactcctttc cccggcggga acgctgaaaa atatgcgtta cgctttcgct
    82981 tatggcgcag atgctgttta tgcgggccag ccgcgttact ccctgcgtgt gcgcaacaac
    83041 gaattcaacc acgaaaatct tcagctcggc atcaatgaag cccacgcgct ggggaaaaag
    83101 ttttatgtcg tggtcaacat tgcaccgcac aacgccaagc tgaaaacctt tatccgtgac
    83161 ctgaaaccgg tggtggaaat ggggccggat gcgctgatta tgtccgatcc agggctgatt
    83221 atgctggtgc gtgagtactt ccctgaaatg ccgatccacc tctcggtgca ggctaacgcc
    83281 gtaaactggg cgacggtgaa attctggcag caaatgggcc tgacccgcgt gatcctctct
    83341 cgcgaactgt cgctggaaga gattgaagag atccgcaatc aggtgccgga tatggagatc
    83401 gagatcttcg ttcacggtgc gctgtgcatg gcctactccg gtcgctgcct gctctctggc
    83461 tatatcaaca agcgcgatcc gaaccagggt acctgcacca acgcctgccg ctgggagtac
    83521 aacgtccagg aagggaaaga agatgacgtt ggcaacatcg tacacaagta cgagccgatc
    83581 ccggtgcaaa atgttgagcc gacgctaggt atcggcgcgc caaccgacaa agtgtttatg
    83641 atcgaagaag cccagcgtcc gggcgagtat atgaccgcgt ttgaagatga gcacggcact
    83701 tacatcatga actcgaaaga tctgcgcgcc atcgcccatg tagaacgcct gaccaaaatg
    83761 ggcgtgcatt cgctgaaaat cgaaggccgt actaaatctt tctactattg cgcacgcacc
    83821 gcacaggttt atcgtaaagc tatcgatgat gccgctgcgg gcaaaccgtt cgataccagc
    83881 ctgctggaaa ctctggaagg tctggcgcat cgtggctata ccgaaggttt cctgcgtcgt
    83941 catactcacg acgattatca gaactacgaa tacggttatt cagtttctga ccgccagcag
    84001 tttgttggtg agtttaccgg tgagcgcaag ggggacctcg cagcggtagc ggtgaaaaat
    84061 aaattctccg ttggcgacag ccttgagctg atgacgccgc aaggcaacat taactttacc
    84121 cttgagcaca tggaaaacgc caaaggtgta gcgatgccgg tcgcaccagg cgatggttat
    84181 actgtgtggc tcccggtccc gcaggatctt gaactaaatt acgcgctgct gatgcgtaat
    84241 ttctccgggg aaaccacgcg taacccacac ggtaagtgat taatttcgat tatttttccc
    84301 ggatggaaaa ttcttagaaa ccgatcacat acagctgcat ttattaaggt tatcatccgt
    84361 ttcgctgaaa aacataaccc ataaaatgct agctgtacca ggaaccacct ccttagcctg
    84421 tgtaatctcc cttacacggg cttatttttt atgcataagc cctatccctg gtcaccgtct
    84481 tccattgacc acatcgatag aatctccctt catagcacga tgcctttcac gtaacggcat
    84541 cgtgctcgca caggttccgg ctaagcacaa ccagaacgcg catgtttgat gcttaccaaa
    84601 aaatattctc actctccaca tttgaatgtc agacgagcga caccatgtaa tcctacacct
    84661 tctgtcttca gctcaactat ttgcattttt ttgccctgag taacacagaa atgagttgca
    84721 tcatttttta ctatattttc tgcaccagat attctactcc tggctaaaga agcttcggct
    84781 tcggtgtagt attggttatc gagtttacgc tgaatattac ttttatatgc aagaccaaat
    84841 ttaccgatac ttgtctcatc attatgcaca gcacaaccag acataataaa aatactaatt
    84901 aatgatatag cagctatctt tttcatctca cctttcccca ttaaatacca acgacactct
    84961 ctagtgttta aatataataa tagctgatca ttatatttga ataggattat aataaatgtt
    85021 ctgtacaaca tttcctacat aagtaggact tacagacatg aaggcccttt ccaggtaact
    85081 ccatggggct ttaatatatt tggaatagta tatttaagat gccactgttt ggttgaatat
    85141 taggcatatg ctcttttttg aaatttatcg gtggctaccg ttaatattcg ctgttcccat
    85201 tgcaagctcc tggtggtaac cactgaatcc tccatacttg aactgacttt ttatcctccg
    85261 actttcatcc tgttctgact ccaccttttc ttttctgctc tacactatct acagaccaat
    85321 cataaaggca catacgatca tggcagaatt tcccgccagc ttactgattc ttaatggcaa
    85381 aagtactgac aatctaccct tgcgcgaagc aattatgctg ttgcgtgagg aaggaatgac
    85441 gatccatgtg cgggtcacct gggagaaagg tgatgccgca cgatttgtag aggaggcccg
    85501 gaagttgggc gtcgcaacgg taattgccgg tggtggcgat ggcaccatta atgaagtttc
    85561 tacggcgttg attcagtgtg agggggatgg catacccgcg ctgggaattt tgccattagg
    85621 aaccgccaat gattttgcca ccagtgtagg gattcctgag gcactggata aggcgctgaa
    85681 actggcaatt gccggtaacg ccattgcgat agatatggcg caggtcaaca aacaaacctg
    85741 ttttattaat atggcgacag gcggatttgg gacgcgtatt accacagaaa cgccggaaaa
    85801 attaaaagcc gcgctgggtg gcgtctctta catcattcat ggcttaatgc gcatggatac
    85861 tctgcaaccg gaccgttgtg aaatccgcgg tgaaaacttt cactggcaag gtgacgccct
    85921 ggtattggta ttggtaacgg gcgtcaggcc ggtggcggtc agcaattgtg tccgaacgcg
    85981 ttaattaacg atggcttgct gcaactgcgc atttttaccg gcgatgaaat tcttccggct
    86041 ctcgtatcaa ccttaaaatc tgacgaagat aacccgagta ttatcgaagg cgcttcgtcg
    86101 tggtttgata tacaagcccc acacgaaatc acttttaatc ttgatggcga accgttgagc
    86161 ggacaaaact ttcatattga aatacttccg gcggcgttgc gttgtcgatt accaccagat
    86221 tgtccattat tgcgttaatc aaactattct ctcttgaacc agggagaatc cgaaatgccg
    86281 gatgcggtgt aaatacctta tccggcatac agaacaatac tacaccgtaa ttaattttac
    86341 ccgtgtcttc tgcaatgcca gtttatccac ctctgataca gcatcatcgg taataataat
    86401 gtcaattttt tcgattggca gtacctgatt aaaaccgcga cggttaaatt tcgatgaatc
    86461 gagaacggca atcactttat tagcggctgt gaccatcgca ccgctaacgg aataaccctc
    86521 attaaaggtc gtaataccat taaccgcatc aataccatca gcaccgacaa acattaaatc
    86581 ggcattaata tcctgcaggg aacgttcagc aatagatcca tgcatagatc gcgttttatg
    86641 gcggaccgtg ccaccgcaga cgaccagagt aatgtcttta ttttcggaaa gggcaaacgc
    86701 tgccgggaga ctgttggtaa tcaccgtgat atttttagcg gtcattaatc cttcggcgat
    86761 aagcattgtg gtacttccgc tgtcgagaat aacggtcatc ccttcatgga tcattttgac
    86821 tgccgcctgc gctattctgt tttttggcgc gctggcgagc tgaaatcgct ctttaaaccc
    86881 gacttcctgg gtctcggttt cactattacc ggacattatt ttcgccgcac cgccatgaaa
    86941 gcgcgtaacc acgccttttt gttcgagaaa gcgcaaatcg gcacggattg tcgcttccga
    87001 ggcagcaaat actcccgcca gatcctgaac aagcacggtt ccctgttcat tcactaattg
    87061 gatgatctta ttccttcgct cgaatgaatt catcgtcatt tacccatatt caattgtggc
    87121 tagtgtaaac gaagggggac cattggtgaa tgatctgttt tgcacaatac cgggccagca
    87181 tcacgctggc ccgcggtttc atggaatgag caacactttg cccggcatgg cattacgagc
    87241 gatgtcacgc accgcctggg tgaagctttc aaagcttcca cggtgagcga ttaatggctc
    87301 caggcttaac ttacgttctg tcagcaaccg gctcgccgtt tcccactcct gccccggcca
    87361 agggctggaa tagttcatcc aactgccgat aaccgtcagc tctttacgca atattttgcc
    87421 aaacgttgcc gatgttaaat gcagatcctg atgcaacgtg cccaccagcg ccagttgggc
    87481 atgaggaccg gcaatctcta ccgccagttc gacagtttgc ggtacgccag ccgtctcgag
    87541 gataagctga ttaaaacgca gttcgcgtaa aacgctctgc atttgcggcg cgctcatttc
    87601 gctactgtta aatgtttgca tcgaaccgaa agattttgcc agtgccagtt tttctgagct
    87661 aatgtcgata gccgtcacac tctttgctcc cagcgcgaca gcgcactgaa tagccagcag
    87721 gccaatggtt ccggcaccaa taataataac gtttttattc tcacaacctt gcgctaaatg
    87781 aaaagcatgc agaccaacgg taatcggctc aataaaagcc ccatcctcaa taggcatatc
    87841 cgtgggtaga gcaaagacat tttttcgctt aacgacaata tattcagcaa atccaccatc
    87901 acgccgcgag ccaataaaat catattttgc gcactgggaa taaaaccctt tcagacactc
    87961 tggacaagta aaacagggta ataacggcac acaggcaacc gcatcgccag ggtgtaaatc
    88021 atcaacaccg gatcccaccg catcaatata gccgctaaat tcatggccta acgttattgg
    88081 ataataatgt gcaccatttt taaatatcct gggtaaatcg gaaccacata agcccgagct
    88141 ggcaattttt acccgcacct catcctgatg tttaatttca ggaatgacgc tttctgcaac
    88201 gcgcacgata ccatcagtat cattcaccac tgatttcata aaaactcctg attgttaagg
    88261 gggataaact ccccctcagt taaaaattat tctgcgagaa cggctttctc ttgtttaata
    88321 aaaccacgcg ctctacgcca ggtaatgaaa ataccggtca gataaattgc gccgataata
    88381 atgaaaccgg gaatattttg cggggagaaa acctgaatca gtaaccaggt aatgggagaa
    88441 ccgccctgat ccattgaagc caccataccc ccggctttta acgccccagc attagccgcc
    88501 agttgggtgt gcaaaccaat agtttgcgtc gcgatccaca gagtgatgct catgatgatg
    88561 acacccgaga ttaaggtgcg gaacagattt ccacgatgca cggcgactgc catcgccaca
    88621 aagaagccga tggtggcaag atcgccaaac ggcagtacct gattacccgg aacacaaaca
    88681 gcaattaaaa tggtgagcgg gataaaaatc aggcttaccg ataccaccgc cgtatgcccc
    88741 agcagtaatg cgggatccag gccaatcagg aactcctgac cgccgaactt cgcctgtaaa
    88801 cgactacggg cctgcttagc gatgggcgtt aaaccatcca tgatgggttt aatcacccgt
    88861 ggcattagca gcatcactgc cgccgttttt accgccagct gcaatacacc tttgacatcg
    88921 taacccgcga ggatgccgat aatcagcccc atcacaaaac ccacggtgac aggttcgcca
    88981 aaagggccaa atttgcgctg aatatcatcg gcgctaaatt taattcggtt aacgcctggg
    89041 attttctcga tgatagcatc gaccagcacc gcaatcggcc ccatatacgc cgacgtaccg
    89101 tgcggaatag caataccttc cagctcaaag aaatttcggg tatcgcgggc aaaccagtcg
    89161 ccgagcttat aaacaaacgc cgcgtgaatt accacacccg ccatccctat catccatgaa
    89221 ccggttgcca gatgcagcaa cgcgccggtg aaagtcatat gccagatatt ccagatatca
    89281 acatttacca cccgcgtcat acgggtcagt aacatcgcca cgttaaccag aatagcaatc
    89341 ggaatcgcca ccagcgcaat ttgcgacgcc caggtcattg gtgaagagcc cggccagccg
    89401 acatcgacca catgcagatt caggtcgaaa ttttccgcca tcgctttcgc cgccggacca
    89461 atggaatcca gcattaagcc aatcacaagg ccaatgccaa caaagccaat ccctatatga
    89521 agacccgctt taaagcaatc gcctgccttc atgcctaata ttttagaaaa aataatgatg
    89581 acaatcggca gcatcaccgt agggccgagg tcgagaatat aacgcatgac ttctgaaaac
    89641 ataggtcacc cctgtaagat agtcagaatt ttattttgta atgcttcgat accgacacca
    89701 gaaacaaaag gcatgccgtg aactaacgga atatcgccaa aactacgatc caccctggca
    89761 gtagtgcata tcaaatgcac gccatccata taggtttcta tttcattaac ccgacactgg
    89821 attaattcaa caggaatatt atgattctga cacaattctt taatttcttc cgccgccatc
    89881 gtagaggtcg caaccgcgcc tccgcaagcg acaataatct tgcgtttcat aaatagtcct
    89941 ttttattgtt acagagggat ttattcgtct gaatctaaaa catactttgt gaagtattcc
    90001 tttaactggg tttcaggaag agtgattagt gtctcgacga tatcgggctg ttgtaacttg
    90061 ccaaataaac agcgtaaaag tttcaattgc tgctgcggat tttccacaat caacgcaata
    90121 accaacgata cctccacgtc gttatcatca tccgcttgct gaaaatgaac tttatttgtt
    90181 ggccttaaca gataaatggc tgacgactta gcatgaatcg cctcacaatg cggtattgca
    90241 atggcgtgct gctcaagcat tatcccggta gggaattctg cttctctggc aattaatgcc
    90301 tgtggccagg tatcatgaac cacacctttg gcgagcatct cattaccgat atgggttaaa
    90361 acttcgctac gatcgacaaa agaaattccg ctacgaacaa acaggttagt catataccgt
    90421 ccttattccg cacagccgta gcgataggcg cgcaaaacat cataaatttt atccataatc
    90481 agctaatgcg gtattgctga taattccccg gactgaatgc gttcaaattg tttgggaaga
    90541 tactgactaa tcatgcccag tgggatgtcc acgccttcaa gattcaccat catcgtttcg
    90601 acgctatttt taatccgact atgcggccag taataacgaa tacgatccga caggctgtaa
    90661 cgaatatcca gtaatgaatc gttaaaaccc gtacgataat attttttcca gtattgcggt
    90721 tcgtcgagca tcacttcttc aattaccgcc aggcaaccgc tgcgattttc aggggcgata
    90781 agttcctgct caatttgtgc cagtgcaaat atcgcctcgc gtaaagcaaa ggttaatgcg
    90841 ggaccgactt tcaatattgc aaagtgatcg cggactaatt cccaataagc cgtccgggtc
    90901 tggtaatcgg tagaatgtgc ttcataaacc attcgggtgt tttctatcca ttgcgccagc
    90961 ggctgcgctt cctgcggctg ataatggata atattgctgt gatcaaattc cacgcccggc
    91021 tgcaccacga tggcaatcac gcgtgttaac gcctctgtca gcccacggac aataaaggcc
    91081 ttttgatgcg tacgtaaagt attggcggca tcttcaacat gggtgatgtg tactgactga
    91141 atggcgctgg cctcaccgcc cggaaccgga acttcggtgc caatgacata gctcagttgc
    91201 tcacgctggc aatctgtcgc cacactttcc gcagcaaagc aaagcacagc agctcgttcc
    91261 gcaaccgttt ctggtgctaa cggtatggga tcccccgcgc aggacattga cgcatcaaga
    91321 tgaattttac tgaagccggc acgaacatat tcctttacca gctcgacgga tttttccatc
    91381 gccgcatccg cattttcttg ctgccagcag tttggcccca gatgatcgcc gccgagaata
    91441 atgcgttcgc gtgcaaaccc aactttatcg gcaatcgtaa aaacaaattc gcgaaagtct
    91501 gccggtgtca ttccggtata accgccaaat tgattgacct ggtttgacgt tgcttcaatc
    91561 agcactttgc gcgtgctgtt gcgatcaaat gccagcgccg cttcgataac caacggatgg
    91621 gcagaacaga ctgaacatat gccgatatgt tcaccagctt tatgccgggc aattaacgtt
    91681 ttcatgtttt ttccttatta aatggcaggt gcgttatgcc ctgccctcgc agccacaatc
    91741 ggcaatcact ttgctcacca catcgcgcat tgcggattta gccgactgca aataatcccg
    91801 gggctcggtc gcttcagggt gctcggtcag gtaatttttt aacgcctgcg agaaggcatt
    91861 tttcagctcc gttgcaacgt tgattttgca tatccccagt ttgatggttt gctgaatatc
    91921 cttagtcgat aaccctgacg cgccatgcag caccagcggt aagttcaccc actggcgaat
    91981 gttctccagt ctagaaaaat caagcgccgg tgcgctggca tacatcccat gagccgtgcc
    92041 gatggcgacc gccagggaat caattccggt tgcctcggca aattcacgcg cctgagcggg
    92101 gttggtataa aaagcatcgg cttcattgac ttgcacatca tcttcctggc cgccaagttg
    92161 ccccagctcc gcttcgacgc tgacatcaaa gcgatggcaa aaatccacca cctctttgac
    92221 ccgtgaaata ttttgcgcaa aaggcaaatg cgaggcgtca atcatgactg agcgcacgcc
    92281 agaacgaacc ttctgagcga tatcgtcaaa tttcgtgtga tggtcgagat gaattgccag
    92341 tggatggtga tattgcttcg ccatcgcgct gaccagcgcc aacagatttt ctgtaccagc
    92401 atgagtaaat gtgccaggcg ttccggcgat gatgaccggc gcatgcaggt tggcagcggt
    92461 ttccaccacc acttgcatcg tttcgagatt gtgaatattg aatgccggaa ccgcataacc
    92521 gccgcgctgt gcgttgttca gcatctgctt tgtcgatacc acgtgcattt tcatatcctg
    92581 tcgtttgttt tcgttttcaa aatataatga aattatttgt ttttaaatat cgagataacg
    92641 atcacaaaaa cgacaatatg aaaattattc gaggagtgaa aggcaaaaaa acggcctccc
    92701 gatagggaag ccgtagcaaa gtgcgcgtgt ttttatgccg gatgcggtgt aaacatacgt
    92761 ggcagtgcta tgtaggcatg ataagacgct tccgcgtcgc atcaggcata ggttgccgga
    92821 tgcagtgtaa acgccttatc cgtcctacgg ggtggtgttg ttcgtataag gcgtatcagg
    92881 caatagtaat tttgctatcg agataaacgt cctgcacggc gttaatcagt ttcacgccgt
    92941 cagccatcga tttcttgaac gccttacgtc caagaatcag ccccattccg ccagcgcgtt
    93001 tgttgataac cgcagtacgc actgcatcac tgaggtcagt ttcaccgcct gcagcaccgc
    93061 cggagtttat caacccagcc cggcccatat agcagttagc taactgataa cgcaccagat
    93121 caatcgggtt ttcgctggtt aacttgctgt acacgcgatc gtcggtataa ccgtaattaa
    93181 tcgctttata gccgccgtta ttttccgcca ttttttgttt gacgatatct gcgccgatgg
    93241 ttgccgccag atggtttgcc tgaccggtca ggtcggcgga aacatggtaa tcaacgccat
    93301 ctttcttaaa ggcggagtta cgcaaatagg cccacagcac ggtcaccatg cccagctcat
    93361 gcgcacgttc aaaagccgca gaaatttctt caatctggcg acgtgactct tccgagccaa
    93421 aatagatagt cgcaccaacc gccaccgcgc ccatgttgaa agcctgctcc acgctggcat
    93481 acagcgtttg atcgtaggta ttcgggtaac ttagcgtctc gttgtgatta agtttgacga
    93541 gaaatggaat gcgatgcgca tagcgccgcg ataccgacgc caacacgccg taagttgata
    93601 ccacacagtt acagcccgct tcgatcgcca gttcaacaat gtttttcggg tcaaagtaga
    93661 gcgggttagc agcaaatgaa gctccggcag agtgctcaac gccctggtca accggcagaa
    93721 tagaaagata tcctgtgcca gccagacgcc cggtgttgta caacgtctgc atattacgta
    93781 acaccgctgg cgggcgatta ttgtcaatca ttacgcggtc tacgtagtca tgtccgggga
    93841 gataaagctg gtcagaagga attgtcatac aacggtgctg taaaaggtta tcggcgtctt
    93901 tgccaagcaa ctgcgcaata tctgtcatta ctatgctccc gtaaattccg attggatatc
    93961 ggctatggat tgtcctggcc cgccttttgc gggcaatcat aatcctggtc gttacgggcg
    94021 agtttttcca tcttttggat gttttttcag cgttttctgt tggctcgatt catcagaaaa
    94081 aatgttagcg cggtcaagtt ttcaccgtaa agatatttaa aaggtattat taagtggtat
    94141 tgtcatcgcg taccttacat tacctgtcat gaaggaatta aaagatgaaa acaacagcaa
    94201 agctgtcgtt catgatgttt gttgaatggt ttatctgggg cgcgtggttt gtgccattgt
    94261 ggttgtggtt aagtaaaagc ggttttagtg ccggagaaat tggctggtcg tatgcctgta
    94321 ccgccattgc ggcgatcctg tcgccaattc tggttggctc catcactgac cgctttttct
    94381 cggcgcaaaa agtgctggcg gtattgatgt tcgcaggcgc gctgctgatg tatttcgctg
    94441 cgcaacagac cacttttgcc gggttctttc cgttactgct ggcttactct ctaacctata
    94501 tgccgaccat tgcgctgact aacagcatcg cttttgccaa cgtgccggat gtggagcgtg
    94561 atttcccgcg cattcgtgtg atgagcacta tcggctggat tgcctccggt ctggcatgtg
    94621 gtttcttgcc gcaaatactg gggtatgccg atatctcacc gactaacatc ccgctgctga
    94681 ttaccgccgg aagttctgct ctgctcggtg tgtttgcgtt tttcctgccc gacacgccac
    94741 caaaaagcac cggcaaaatg gatattaaag tcatgctcgg cctggatgcg ctgatcctgc
    94801 tgcgcgataa aaacttcctc gtctttttct tctgttcatt cctgtttgcg atgccactgg
    94861 cgttctatta catctttgcc aacggttatc tgaccgaagt cggcatgaaa aatgccaccg
    94921 gctggatgac gctcggccag ttctctgaaa tattctttat gctggcatta ccgtttttca
    94981 ctaaacgctt tggtatcaaa aaggtattat tacttggtct ggtcaccgct gcgatccgct
    95041 atggcttctt tatttacggt agtgcggatg aatatttcac ctacgcgtta ctgttcctcg
    95101 gtattttgct tcacggcgta agttacgatt tttactacgt taccgcttac atctatgtcg
    95161 ataaaaaagc ccccgtgcat atgcgtaccg ccgcgcaggg gctgatcacg ctctgctgcc
    95221 agggcttcgg cagtttgctc ggctatcgtc ttggcggtgt gatgatggaa aagatgttcg
    95281 cttatcagga accggtaaac ggactgactt tcaactggtc cgggatgtgg acttttggcg
    95341 cggtgatgat tgccattatc gccgtgctgt tcatgatttt tttccgcgaa tccgacaacg
    95401 aaattacggc tatcaaggtc gatgatcgcg atattgcgtt gacacaaggg gaagttaaat
    95461 gaaaacagaa cgtattctcg gtgctcttta tgggcaggcg ttaggggatg cgatggggat
    95521 gccctccgag ctttggccac gcagccgcgt taaagcacac tttggctgga ttgaccgttt
    95581 tcttcctgga ccaaaggaga ataacgcggc ctgttatttt aaccgcgccg aattcaccga
    95641 cgatacctcg atggcgctgt gtctggcgga tgcgttactg gaacgtgaag gcaagatcga
    95701 tccggatctg attgggcgta atattctcga ctgggcgctg cgtttcgacg cctttaacaa
    95761 aaacgtacta ggtccgacct cgaagattgc gcttaacgcc attcgcgacg gtaaacccgt
    95821 tgctgaactg gaaaacaacg gcgtgaccaa cggcgcagcg atgcgcgtct cgccattagg
    95881 ttgtttgctt ccggcgcgtg atgttgattc ctttattgat gatgtagcgc tggcgtccag
    95941 cccgacccat aaatccgatc tggcggttgc aggcgcggta gtcatcgcat gggcgatttc
    96001 tcgtgccatt gacggagaaa gctggtcagc gattgttgat tcactgcctt caattgcgcg
    96061 acatgcccag caaaaacgca ccaccacgtt cagcgcctca ctggcggcgc ggctggagat
    96121 tgcgctgaaa attgtgcgca atgccgacgg caccgaatcc gccagcgaac agctttacca
    96181 ggtcgttggc gcaggtacca gcactattga gtccgttccg tgcgccattg cgctggttga
    96241 actggcacaa accgacccga atcgctgcgc cgtcctgtgc gctaaccttg gcggcgacac
    96301 agacaccatc ggtgctatgg cgacggcaat ttgcggcgcg ttgcatggcg ttaacgctat
    96361 cgatcctgcg ttaaaggcgg aactggatgc ggtaaatcag cttgatttca accgctatgc
    96421 cacagcgctg gcgaaatatc gtcaacaacg ggaggcggta tgagcggcgc tcgattacac
    96481 acgctgctgc ctgaattaac cacgcgtcag ccggtgatgg tcgtcggcgc ggcggtcatt
    96541 gacgtgatcg ccgacgctta tgccctcccc tggcgtgggt gcgatatcga actgaaacag
    96601 cagagcgtta acgttggcgg ctgcgcactg aatattgccg tggcgttaaa gcgcctcggc
    96661 atcgaagcgg gtaatgcctt gccgctcggt cagggcgtgt gggcggagat tattcgcaac
    96721 cggatggcaa aagagggctt aatcagcctg atcgataacg ccgaaggtga taacggctgg
    96781 tgtctggcgc tggttgagcc ggatggcgaa cgcactttta tgtcattcag cggtgtggaa
    96841 aatcagtgga atcgccagtg gctggcgcga ttaaccgttg cgcctggcag cctgctctat
    96901 ttttccggtt atcaactggc ctcgccctgc ggcgaattgt tagtggaatg gctggaagag
    96961 ctgcaagacg tgacgccgtt tatcgatttt ggcccacgta ttggcgatat cccggatgca
    97021 ttactggcgc ggatcatggc ctgtcgacct ttagtgtcgc tcaatcgtca agaggctgag
    97081 attgccgccg aacgttttgc tttatccgca gagataacaa cacttggcaa gcaatggcag
    97141 gagaaatttg ccgcgccgtt gatcgttcgt ctcgataaag aaggcgcatg gtatttcagc
    97201 aacgacgctt ctggctgcat tccggcattt ccaacgcaag ttgtcgacac cattggggcg
    97261 ggcgacagtc atgccggtgg cgtacttgcc gggctggcct ctggtctgcc actggcggat
    97321 gccgtattac tgggcaatgc agtggcgtcg tgggttgtcg ggcatcgggg cggtgattgt
    97381 gcgccaacgc gcgaggaact actcctcgca cacaaaaacg tatagatcgc tgcgacagtg
    97441 gctaatgctg tactcaatag gccgttgctg ttggtcaagc gccacttgct tgatcaccag
    97501 caccggtatt ttgctatcta actgaatatg tgactgaaac tcggcatccg gcatccgggc
    97561 gctaacgcgg gaacgcgtac gttgtgggta aatgtgctgg ctgcagaaat agtcataaag
    97621 tgaaatcccg atggcatcaa catcatgaat taaatgcgcc ggaacccacg attcctcaat
    97681 cgataccgct tcttcatcga catagcgaat acgcttaagc aaaaagacat cacttcctgc
    97741 ttcgaccgcc agctgctgcg cgacttcttc gggacatttc acgacacgct tgttaaccca
    97801 tagcgtatcg ggctttttcc cgcgcaatac cacctgctga gaaaaacctc gcgcttcttt
    97861 caacgagtat tcgaagatgt tgttgatctg cgtgccgtaa ccgcgcgaac gcgtcaccac
    97921 accctcttct tccagcgcct gcatcgcctt gcgcaccgta atgcgcgaaa cgccggttaa
    97981 ctgacttaaa tcacgctcac cgggcaaaat attgccatgc tccagcaccc cgctgcgcac
    98041 ggcatttttt accgtttcgg caaacttaat ataaagcggc gtgttatccg ccgctaaaat
    98101 acgctcgttc agttgggcaa tcagctgggt atgcgcttgt tccatttgtc tttttcctgc
    98161 cggggagtct ggtgggagta tatcactgct tcttatttaa ggcgtttctt taatcccatc
    98221 aacgaatgcc tgcaactcct ccaccgtgcc attaaataca ttaaaatcca ccggaccatt
    98281 gatgccatct acctgtccac ggtcggaatg ctgccagaag cgccaggcca tgccgtcatt
    98341 gtccggacga cgttgataat agtgagccac ccaccacgga tattcattga aatagcccgc
    98401 cagattcgtg tgataaaaaa cggctcctga gtaaataatc ggctttttcc ccgtactttt
    98461 ttcgaccatt tttagccact gacttaccct cttgcgtaat tcttttgccg ataattttcc
    98521 tcgctcttct acgtccagta ccgcagggaa atcgccttgt gagaaatcta ccgtttgcag
    98581 aaataatcgc acctgaaccg gtgctgctac cgacggggag aaataatgat atgccccgcg
    98641 cagcaggcca ttttcgcggc ttagttgcca gttacgcgaa aaataggggt ccaccagctt
    98701 ttcgccttcc gtcgccttaa taaaagcaaa ctgtaagcgg ataccgttgt cgcgcatttt
    98761 tgccacccgc tgccagtcga tccgctcctg ccagcgcgaa acatctattc cgtgaatggt
    98821 gtaactggca ggaatgcgaa tagcgaaaga tttaaccggg cgataaccgt agaagtggat
    98881 gtagtctgta atctgaactg ctgtcgaata gaaaaaattc accgtctgac gcggataaat
    98941 tgcaacgatg gaaattagcc caagagcgca taatagagag gtgagttttt ttcgactggt
    99001 aattcttagc tgcattggtt tcatccctga atgtcagtgc caaaggctga caataaccaa
    99061 agcagctata gtacggtgct caccaccagg cgtggaagtg gtgaaccgga ccaataccgt
    99121 gaccaacttc cagcgtgtcg gcctgggcta acgccgatga aagccagctt tttgcctcct
    99181 gtacggtgtc agcccagttt gtatggcgcg ggcgtagtgc agccaacgcc gcagagagtg
    99241 tacaaccagt gccgtgggtg tttttggtca taatgcgcgg tgcggtaaac cgttgttcac
    99301 cctcgcgggt aaacagccag tccgggcttt gctcatcatc cagatgacca cctttcatta
    99361 gcactgcgcc acagcccatc gccaacagcg atcgcccttg ttccagcatt tcctgttcgg
    99421 tgcgcgcgtg tggcgcgtcg agcaaggcgg cagcttcggg caagtttggc gttattaatg
    99481 aaacctgtgg caataatcga ctgcgcagcg tagcaaccgc cgaaggtgaa agcagcgggt
    99541 cgccgctttt tgccagcata acggtgtcga gtaccacgtt ttggatctga taacgttgca
    99601 accgttctgc caccgcttca acaatatcgg tttccgccag cataccgatt ttagtggtat
    99661 cgattcgcac atcgctgaac accgaatcga gctgggcggc gacaaaatca ggctcaatgc
    99721 gatacaccga ctgtacgcca cgggtatttt gcgccaccag tgcagtaata actgagcaac
    99781 cataagcgcc aagtgccgag aaggttttaa gatcggcctg aatccccgca ccaccactcg
    99841 gatcagtacc ggcaatcgtc agagcgttaa ttcgtttcat gcctgcacct cctgcgtcaa
    99901 ttgccagagc gcatcaagga aatgtggaac aaaactgcct ggcccctcgc ttctggcgac
    99961 tgcgcgttct ccggcttgtt tcatccagtg acaggcagat gcgacatttt ccagcgtatc
   100021 gcctggtaac gcacagcagg cagcgacaac cgccgataat gcacagccag ttcctaccac
   100081 tttggtcatt aacggatcac caccgtgaat accaatgata cgatgtccat cggtaacata
   100141 atccatctcg ccagtgacca cgacgattgc gccagtttcc cgtgccagtg tttgtgcagc
   100201 gggtatcgcg ttagctgcgg cgtcagtggt atccactccc cgtccgccat tagcaatgcc
   100261 agctaatgcc atgatttccg aagcattacc acgtatcgct gccggtttaa aagataaaag
   100321 ttcatgacaa aaatggcggc gataatcgag cgcacccacc gctactggat caagcgtcca
   100381 gggtgtttga gagctttttg cttgctcaac ggcagcacgc atcgcctgag cgcgtggctg
   100441 cgtcagtgtg ccaacgttaa tcaacaaggc actggcgata gccgcaaact gactggcctc
   100501 ttcggtttcg ataaccatcg ctggcgatgc accgagcgcc agcaaggtat tggcggtaaa
   100561 ggtttgcacc acatcattgg tcatgcagtg cacaagaggg gaatgttggt gaaaaaggtg
   100621 taacgcgtgc gcagattgcg ctgaacccag caggtcgact tgcatagttt gctcctgcca
   100681 taacgtgaag aagcaatgac ctggtggtcc gtgacttccc tacgctggca ttatccagat
   100741 caggtgatac gggtatttct cagccttcac gcagaagggc accccgagtc gtttggttgc
   100801 gatgataaat cgcagaggag gatggtaatg tccagcgcac gcgttgtaaa cgaggaaaaa
   100861 cggcagtttt acaatcgcgt taataaatta tttgatatat gaatccagca ccttcagaac
   100921 gacatccaga tcttcttcac gttttagctc atccccctgg tgaacgatgt gttccgtcag
   100981 atgaccttta atcacttccc gcatcagacc gtttaccgcg ccacggatag cagcaatctg
   101041 ttgtaaaact gcagcgcatt cgtgcggctc gtcgagcatt ttcttgagcg ccacgacctg
   101101 gccctgaatc ttactggcac gcgctttcag tttctgttta tcacggattg tatgagacat
   101161 ggcaacacct ggttaacaag aatatgaaaa atcatagcac tattaatcta ctggggggta
   101221 gtatcaggta ctggggggga gtagaatcag attgccgaat taatactaag aattattatc
   101281 atgaccgaat ttacaactct tcttcagcaa ggaaacgcct ggttcttcat ccccagcgcc
   101341 atcttacttg gtgcgcttca tggcctggaa ccagggcact caaaaacgat gatggcggcg
   101401 tttatcatcg ccatcaaagg caccattaaa caagcggtga tgctcggact ggcagcaact
   101461 atttcgcata ccgcagtggt ctggttaatt gcctttggcg ggatggtgat cagcaagcgc
   101521 tttactgctc aatcagcaga accgtggctc cagctgattt ccgcagtgat cattattagc
   101581 accgcgttct ggatgttctg gcgtacctgg cgcggcgaac gcaactggct ggagaatatg
   101641 cacgggcatg attatgagca tcatcatcac gatcacgaac atcaccacga ccatggacat
   101701 catcaccatc acgaacatgg cgagtatcag gatgcccatg cacgagccca tgccaatgac
   101761 attaaacgac gctttgatgg tagagaggtc accaactggc aaattttgtt atttggctta
   101821 accggtggcc ttatcccctg cccggcagca attaccgtgc tgttgatatg cattcagttg
   101881 aaagccctga cactgggcgc aacactggtc gtcagtttca gcattggcct ggcgttaacg
   101941 cttgtcaccg taggcgttgg cgcagcaatc agcgttcagc aggtcgcaaa acgctggagc
   102001 ggatttaaca ctctcgctaa acgcgccccc tatttttcca gtctgttgat tggcttagtc
   102061 ggtgtgtata tgggcgtaca tggcttcatg ggcataatgc gataactcaa tcctttaggc
   102121 ttgcatgtta tcttcagccc aggatgattc ttaaatcagc tatttccgct gactctctgc
   102181 tcgctaagga tgcttttagg gcatcctttc atttacactt tttacgaaat catgggatca
   102241 ctaacaaaat atcgcttgtc agttatattg tatggcagga aagatatgcg actgatatta
   102301 cagatcccca aagtggagag tttatgacca ttaaaaataa gatgttgctg ggtgcgcttt
   102361 tgctggttac cagtgccgcc tgggccgcac cagccaccgc gggttcgacc aatacctcgg
   102421 gaatttctaa gtatgagtta agtagtttca ttgctgactt taagcatttc aaaccagggg
   102481 acaccgtacc agaaatgtac cgtaccgatg agtacaacat taagcagtgg cagttgcgta
   102541 acctgcccgc gcctgatgcc gggacgcact ggacctatat gggtggcgcg tacgtgttga
   102601 tcagcgacac cgacggtaaa atcattaaag cctacgacgg tgagattttt tatcatcgct
   102661 aaaaaaatcc ccctcatcat gagggggaaa tgcagacacc ttgttatttt ttattattag
   102721 ccacttgctc gtcttgcttg ttattagtcg tatttcacgt tgattaatgc ggttgcctcc
   102781 aatgcgccag atttaacttt gtttgtatcg tagacgtagt aactggctgt tatcggaatt
   102841 gaaaccgttg tatctgtaag ttttgacttt gccgcaattt cttttaaatt tgtgtatcct
   102901 ttgctgttat cagtgatatt taaaagtgtg actggcgaac cattactttc aagaataaat
   102961 cctacgccat tatcttccgc acctttcagt attgtgttgc tgttggttaa caagtcagaa
   103021 cttgataaat acacctgcat tttccgtgat gtttgatttt gttgacctaa taaattttta
   103081 caacgcagaa taatatcccc ttttttacta tttattgttg ctttgttacc tgtggctggt
   103141 aattgtgaaa cgggaatacc ctctaaagta attaataaat cgtccggttt gcaggttgtg
   103201 gttatcgggt tgtatgacaa ggtcagatta aaggaataga cacctgcatt ttgtgccaat
   103261 gcatttctat agctatttac acatgcatcc catgacttgc cacctaataa acacagtaga
   103321 aattgtactg cggcactccc gcgtgtcgat gatgaagcac tggataatgt cgcaacacca
   103381 ttaatcatca ctgaaccgcc gccccccgca gaaacattca cttttgcatt actggccgca
   103441 ggtgtcaccg ttaccgaata accattggtg aaactggtct gattatttga caacgtgatg
   103501 ttatttttat tggtccattc aaaatgtaaa tttaatttaa tggtatcgtt ataaagtcca
   103561 acaataatat ccgacgggct cataggggtg atagtatttg tactcacgca tgacgaatca
   103621 ttaaaattat gctcatatgt cgccatttgt gtttgagtaa gtgcaaaatc cccctgaaca
   103681 accaagttgt gctgaacaga taactcacta taacatgccg catagctcac aggcataacc
   103741 atcatcatta atataaatag cattatgcga atttccatag aaccacctga ctattactgg
   103801 caaatataat ttctactttc atcaatctct ttaccgaagg tgattgtgca tgaaagtcct
   103861 tgttgcttat caattgctac attaaccgat ggcggtactt cattggtgcg aataaataac
   103921 tggcttccct gaccgacaac gccaatatta tgaccatgga tatcattgac ttcataacca
   103981 aacattaatg gttgcccatc cgctcttaac gcttttataa accagggctt gcgctgatcg
   104041 gtatcaaaat taaccagtac aaccgcgccg cgataagggg cggcaatttt ccggttgcca
   104101 cgtaattctg cttcgctatc gctttgcgac acatccagca tcaggtgatt ttcccgataa
   104161 ggtgtcattc cgtcgtatat caccactcca ttacggtttg ttgtgcgata tttttgccca
   104221 ttgacataag catctttaat tcctggcgca ttcatcacag caaacgtttc ggaaagacgg
   104281 ttcgccagat taacgccacc cgaccaggcg acaatgcccc ctgaaacact ggctccagcc
   104341 tgtcgataag tactcgactg actataactg ccattcactg tcgcaaccgg cgcgttccag
   104401 gtcaaattcg ccccagctgt cgtttcattt ccctgatgtt gatgactcag gttgacacca
   104461 taattgaact gatcccgact ccctactgtt cctgataatc ccgtattatt tgaggcaaac
   104521 ccctgatcat caaacgtcgt tgagttagac atatatattt gccgacgagg cgtcgtaacg
   104581 tcatcacccc aatcaaaggg aatcgatata aaaatattaa atcgtttctc ttcatgatga
   104641 ttctcgtcat aagcctggct tgccgcgagg gtatagctta tccgccgcca gttattggaa
   104701 taactcaact gataatcctt actgctgccg ctacgtcccc agtaatctcg ccataacgta
   104761 cttaaggaca cagaacccca gccttctggc aatgactggc tcatattggc agaaaagcta
   104821 tttttacggc caaaatcgtt ctggtaataa tcggcaatgt catagacatc gttttcatca
   104881 cggcgataat tatctttatt gtttgcccaa acgtgatcat taaatgtccg gtaatcacgc
   104941 gatgaataac gccaggccgc aagaccaaaa cgcgtcgacg tttggctcac aaatttgttg
   105001 taggcaattt gataactttg cccgtcaaac acatcgccgt tgtcttgttt actatgcgac
   105061 ttagtggcat cgacggaaat ggcaccaatg cgtgtattcc agccagtccc caaagtaaac
   105121 gcgtaataat tattcgcgac catcgagccg ccatacagcg tcaataaatt attaaaacca
   105181 tactgataac ccacctggac aaattcactt tgtttgctcg ccccttcaat atggctacga
   105241 cccgccgcaa aatcatattt cgacacgccg ggttgcagca tatttggcac cgctgcataa
   105301 ggcaccagat aggtggttac cgaaccgtcc gcctctttca cgctgacatc aagatctgct
   105361 ccaccaccgg ccaactgcaa atctgtaatc gcgaacgggc caggaggaac ctctttctga
   105421 taaacgacaa aaccattctg ttcaatagtt accagcgcgt tactctgagc aatcccctgc
   105481 acccgtggcg taaaattttg tttcgagtta ggcaacatct gcatatcacg aaacaaccgc
   105541 acacctctga agcgaacaga atcaaaaata tcgcttgatg tgtacatatc acccacgcga
   105601 agcgtgccga gaagttgggc aaatccacgt tccagataca gggtattgct tttccacacc
   105661 cctggattgt tatttgtttt actgaaactg gcatcagaat gcagttgcca ccccagtaaa
   105721 tttaacccgc tgttaaaacg tacatatgta ctcttgttat tacccgacgc tttatagtcg
   105781 ctgtaatact gactcagata ataagaggta taaaacgcat taataccccg ctcccagttt
   105841 tccggtggaa catagccact ttccagttct tccacccagg cctgcgggac actgaaatcg
   105901 agacgaaaaa ccccgatatc ccaggtatag ctcccaccct gaacaagttg ctcaaatgtt
   105961 aaacattgct taccgctggc gaagttatcg ctattaatgc ctaaccgctt gataacttct
   106021 cttgataaac atgtttcttg cgggttgtct ttaacaataa tctcatattt cccgcgccat
   106081 tgcttattga cataaatatc gatgtcatac tgccccggta agggttgatt atcatcaaga
   106141 cgaatatttg caacctgctg gtctttcatt ccacctatca taaaatgggt atcaaaggtt
   106201 tcttcagctg cataagcttc aatgccgagc aataacgcta cgattgctga tgcaagtggg
   106261 gtcattctca acataggcag ctcctgcaat taaattttgt cactaatata gttgccatgg
   106321 tcatcgataa tggtcagatg ccagttattt gcattattac ttttgacatt aacactctga
   106381 ctttctaagg gggcaatcat aatagtttca taattgactt tgacattatt agctttgaca
   106441 tccgaaatcg tcacccaatt agctgagtca ttttttatca ccaaaccatt gccactgcga
   106501 tttaccagca attttttaaa tgtcgcttta tttaccggag caatacccgc tggccggtaa
   106561 aacaacttaa ttctgttttg catcgcaaac ttcagtgcat tcttaccttc ttgctctgga
   106621 ctatttggtg gaatatccag aacattcaga taaaaaatgc tttctttatt agtgggcagt
   106681 ttattcggca taattttgat ttttacttgc tgcccggaat ttgcccctat ttttgccact
   106741 ggtggcgtta acatgaaagg aacctgaatt ttttctggtg gtaatgacgt atcgccatca
   106801 tcaatccacg cctgcagcag cgaagaacgg tttccctggt tcatcaactg caccatcact
   106861 tctttatttt ctgccgggta aataatgcgc gtcccgtaga taacaattcc ggcatgtgca
   106921 ggaaggacca tagaaaaaat gagtaaagat aataatcctt tcattttaat gcctcttaaa
   106981 ttaaaaggcc gccatgggat agcggccatg tttattacct ggagaaactt acaattttat
   107041 ttattaatcc tgcgccacac gcataaccag agaagataac acatcacctg attgcactga
   107101 gttatctgtc agtttcaggt attttgcttt aaacggaata gcatattgac cttccgctgt
   107161 tttataactc tcaatgttaa aaggtgcaga aacatccagg acatcgctgt tatcacctaa
   107221 atagagatag taacccacgg tatcgttgct actggctatc gccttatcgt taccggttat
   107281 tttatcgttg gtaatcaacg agagttttac accagcaact tctttcgggc agctaatttt
   107341 taacatgctg ctggttacac cgactgcatc atcataggta gaatatttag ctttaccttc
   107401 aaagacactg gttggtacag tcggcatatt aatacttact gaatcaccac ccgcttcgaa
   107461 tttacacgga gattctgcaa tattcccctt aatagttaat gttccggtat caacgtctgc
   107521 agcaaatact ccagcgctca taaaaaaaga agaaaagaca gcggcagcaa taattgaacg
   107581 tttcataata tgttccttaa taaaatttat ttttggttgt taagag
//
LOCUS       DAJVUK010000002        85352 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.002, whole genome shotgun sequence.
ACCESSION   DAJVUK010000002 DAJVUK010000000
VERSION     DAJVUK010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 85352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 85352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..85352
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.002"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1626
                     /locus_tag="OQQ57_000101"
     CDS             <1..1626
                     /locus_tag="OQQ57_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000556401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HCS1955001.1"
                     /translation="VNNGSQVNVTDSSLVSDTIGLTNGSSLNIGANGVVATDHLTVDS
                     YSTVNLTESTGWNNYSNLYTNTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADH
                     NGNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDN
                     GTELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKA
                     DLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHG
                     LADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKG
                     DMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTN
                     SDAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYEL
                     GVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFS
                     FTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW"
     gene            1714..2337
                     /gene="iprA"
                     /locus_tag="OQQ57_000102"
     CDS             1714..2337
                     /gene="iprA"
                     /locus_tag="OQQ57_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HCS1955002.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FFILEGVISLRREENVLIGITQASYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT
                     ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI
                     GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINCLPSEY"
     gene            complement(2338..3495)
                     /gene="ampH"
                     /locus_tag="OQQ57_000103"
     CDS             complement(2338..3495)
                     /gene="ampH"
                     /locus_tag="OQQ57_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HCS1955003.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            3847..5067
                     /gene="sbmA"
                     /locus_tag="OQQ57_000104"
     CDS             3847..5067
                     /gene="sbmA"
                     /locus_tag="OQQ57_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HCS1955004.1"
                     /translation="MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLVA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            5080..6174
                     /gene="yaiW"
                     /locus_tag="OQQ57_000105"
     CDS             5080..6174
                     /gene="yaiW"
                     /locus_tag="OQQ57_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HCS1955005.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(6233..6541)
                     /locus_tag="OQQ57_000106"
     CDS             complement(6233..6541)
                     /locus_tag="OQQ57_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiY family protein"
                     /protein_id="HCS1955006.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ
                     "
     gene            6801..7013
                     /locus_tag="OQQ57_000107"
     CDS             6801..7013
                     /locus_tag="OQQ57_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 domain-containing protein"
                     /protein_id="HCS1955007.1"
                     /translation="MNLPVKIRRDWHYYAFAIGVIFILNGVVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            complement(7037..8131)
                     /gene="ddlA"
                     /locus_tag="OQQ57_000108"
     CDS             complement(7037..8131)
                     /gene="ddlA"
                     /locus_tag="OQQ57_000108"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCS1955008.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPSKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLRLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            8209..8366
                     /locus_tag="OQQ57_000109"
                     /pseudo
     CDS             8209..8366
                     /locus_tag="OQQ57_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8593..8853
                     /gene="iraP"
                     /locus_tag="OQQ57_000110"
     CDS             8593..8853
                     /gene="iraP"
                     /locus_tag="OQQ57_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HCS1955009.1"
                     /translation="MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIEQVEGALYEVKPDASIPDDDTELLRNYVKKLLKHPRQ"
     gene            8954..10369
                     /gene="phoA"
                     /locus_tag="OQQ57_000111"
     CDS             8954..10369
                     /gene="phoA"
                     /locus_tag="OQQ57_000111"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HCS1955010.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNAVTEANQQKP
                     LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKDGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            10488..10808
                     /gene="psiF"
                     /locus_tag="OQQ57_000112"
     CDS             10488..10808
                     /gene="psiF"
                     /locus_tag="OQQ57_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HCS1955011.1"
                     /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA
                     LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL
                     KKAA"
     gene            10910..12025
                     /gene="adrA"
                     /locus_tag="OQQ57_000113"
                     /gene_synonym="dgcC"
     CDS             10910..12025
                     /gene="adrA"
                     /locus_tag="OQQ57_000113"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HCS1955012.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
                     KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
                     TGITVSFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
                     YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
                     ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVG
                     VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(12042..12851)
                     /gene="proC"
                     /locus_tag="OQQ57_000114"
     CDS             complement(12042..12851)
                     /gene="proC"
                     /locus_tag="OQQ57_000114"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HCS1955013.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPNKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            12971..13429
                     /locus_tag="OQQ57_000115"
     CDS             12971..13429
                     /locus_tag="OQQ57_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HCS1955014.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI
                     RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
     gene            13612..14136
                     /gene="aroL"
                     /locus_tag="OQQ57_000116"
     CDS             13612..14136
                     /gene="aroL"
                     /locus_tag="OQQ57_000116"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HCS1955015.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
     gene            14186..14377
                     /gene="yaiA"
                     /locus_tag="OQQ57_000117"
     CDS             14186..14377
                     /gene="yaiA"
                     /locus_tag="OQQ57_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HCS1955016.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            14635..15312
                     /locus_tag="OQQ57_000118"
     CDS             14635..15312
                     /locus_tag="OQQ57_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HCS1955017.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            15384..15668
                     /gene="ppnP"
                     /locus_tag="OQQ57_000119"
     CDS             15384..15668
                     /gene="ppnP"
                     /locus_tag="OQQ57_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HCS1955018.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            15816..16157
                     /locus_tag="OQQ57_000120"
                     /pseudo
     CDS             15816..16157
                     /locus_tag="OQQ57_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            16154..16237
                     /locus_tag="OQQ57_000121"
     CDS             16154..16237
                     /locus_tag="OQQ57_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955019.1"
                     /translation="MTQRPWSKLQHKTHNIAALKIIVRRSE"
     gene            complement(16315..17226)
                     /gene="rdgC"
                     /locus_tag="OQQ57_000122"
     CDS             complement(16315..17226)
                     /gene="rdgC"
                     /locus_tag="OQQ57_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HCS1955020.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            17351..18259
                     /gene="mak"
                     /locus_tag="OQQ57_000123"
     CDS             17351..18259
                     /gene="mak"
                     /locus_tag="OQQ57_000123"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414928.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HCS1955021.1"
                     /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA
                     TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHISGNGTAGEWGHNPL
                     PWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESD
                     PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVPQLIKQFVFGGE
                     CETPVRKAKHGDSSGVRGAAWLWPQE"
     gene            complement(18402..19586)
                     /gene="araJ"
                     /locus_tag="OQQ57_000124"
     CDS             complement(18402..19586)
                     /gene="araJ"
                     /locus_tag="OQQ57_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HCS1955022.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMFFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP
                     LG"
     gene            complement(19712..22849)
                     /gene="sbcC"
                     /locus_tag="OQQ57_000125"
     CDS             complement(19712..22849)
                     /gene="sbcC"
                     /locus_tag="OQQ57_000125"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HCS1955023.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHA
                     AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNALAAITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NGSLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVKAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHKRQLRLLSQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTTLQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
                     LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALSDLVSHKT
                     RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI
                     NGLGYSKLESTFAVK"
     gene            complement(22846..24048)
                     /gene="sbcD"
                     /locus_tag="OQQ57_000126"
     CDS             complement(22846..24048)
                     /gene="sbcD"
                     /locus_tag="OQQ57_000126"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HCS1955024.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIISSQAGLNGIEKQQHLLAAITDY
                     YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALAESLPVE
                     VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH
                     TLAGEHEA"
     gene            24238..24927
                     /gene="phoB"
                     /locus_tag="OQQ57_000127"
     CDS             24238..24927
                     /gene="phoB"
                     /locus_tag="OQQ57_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HCS1955025.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            24985..26280
                     /gene="phoR"
                     /locus_tag="OQQ57_000128"
     CDS             24985..26280
                     /gene="phoR"
                     /locus_tag="OQQ57_000128"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HCS1955026.1"
                     /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTQLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            26687..28006
                     /gene="brnQ"
                     /locus_tag="OQQ57_000129"
     CDS             26687..28006
                     /gene="brnQ"
                     /locus_tag="OQQ57_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HCS1955027.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
     gene            28082..29455
                     /gene="proY"
                     /locus_tag="OQQ57_000130"
     CDS             28082..29455
                     /gene="proY"
                     /locus_tag="OQQ57_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HCS1955028.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            29611..31333
                     /gene="malZ"
                     /locus_tag="OQQ57_000131"
                     /pseudo
     CDS             29611..31333
                     /gene="malZ"
                     /locus_tag="OQQ57_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
     gene            complement(31338..31919)
                     /gene="acpH"
                     /locus_tag="OQQ57_000132"
     CDS             complement(31338..31919)
                     /gene="acpH"
                     /locus_tag="OQQ57_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HCS1955029.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRRETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFI
                     CYARKQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLNAHYTALGTRFWQFYPRMMAQASHKAL"
     gene            32012..33082
                     /gene="queA"
                     /locus_tag="OQQ57_000133"
     CDS             32012..33082
                     /gene="queA"
                     /locus_tag="OQQ57_000133"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HCS1955030.1"
                     /translation="MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            33138..34265
                     /gene="tgt"
                     /locus_tag="OQQ57_000134"
     CDS             33138..34265
                     /gene="tgt"
                     /locus_tag="OQQ57_000134"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HCS1955031.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            34288..34620
                     /gene="yajC"
                     /locus_tag="OQQ57_000135"
     CDS             34288..34620
                     /gene="yajC"
                     /locus_tag="OQQ57_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HCS1955032.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            34648..36495
                     /gene="secD"
                     /locus_tag="OQQ57_000136"
     CDS             34648..36495
                     /gene="secD"
                     /locus_tag="OQQ57_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HCS1955033.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            36506..37477
                     /gene="secF"
                     /locus_tag="OQQ57_000137"
     CDS             36506..37477
                     /gene="secF"
                     /locus_tag="OQQ57_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HCS1955034.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLTQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            37606..37953
                     /locus_tag="OQQ57_000138"
     CDS             37606..37953
                     /locus_tag="OQQ57_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HCS1955035.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADLKAMMNKKK"
     gene            complement(38130..39014)
                     /gene="tsx"
                     /locus_tag="OQQ57_000139"
     CDS             complement(38130..39014)
                     /gene="tsx"
                     /locus_tag="OQQ57_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HCS1955036.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLNFGPFKEWYFANNYIYDMGRNKNGRQSTWYMGLGTDIDTGLPMS
                     LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
                     FNVRSTGWGGYLVVGYNF"
     gene            complement(39313..39852)
                     /locus_tag="OQQ57_000140"
     CDS             complement(39313..39852)
                     /locus_tag="OQQ57_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HCS1955037.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     QETVKITQQNRLNAKSSSGGYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTTLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVDQLGFVRIHDIQPVMQ"
     gene            40003..40452
                     /gene="nrdR"
                     /locus_tag="OQQ57_000141"
     CDS             40003..40452
                     /gene="nrdR"
                     /locus_tag="OQQ57_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HCS1955038.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            40456..41559
                     /gene="ribD"
                     /locus_tag="OQQ57_000142"
     CDS             40456..41559
                     /gene="ribD"
                     /locus_tag="OQQ57_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HCS1955039.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPEHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWGEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            41648..42118
                     /gene="ribE"
                     /locus_tag="OQQ57_000143"
     CDS             41648..42118
                     /gene="ribE"
                     /locus_tag="OQQ57_000143"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HCS1955040.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            42138..42557
                     /gene="nusB"
                     /locus_tag="OQQ57_000144"
     CDS             42138..42557
                     /gene="nusB"
                     /locus_tag="OQQ57_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HCS1955041.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            42635..43612
                     /gene="thiL"
                     /locus_tag="OQQ57_000145"
     CDS             42635..43612
                     /gene="thiL"
                     /locus_tag="OQQ57_000145"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HCS1955042.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGVRIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP"
     gene            43590..44108
                     /gene="pgpA"
                     /locus_tag="OQQ57_000146"
     CDS             43590..44108
                     /gene="pgpA"
                     /locus_tag="OQQ57_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HCS1955043.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(44162..45136)
                     /gene="yajO"
                     /locus_tag="OQQ57_000147"
     CDS             complement(44162..45136)
                     /gene="yajO"
                     /locus_tag="OQQ57_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HCS1955044.1"
                     /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLFYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(45191..47053)
                     /gene="dxs"
                     /locus_tag="OQQ57_000148"
     CDS             complement(45191..47053)
                     /gene="dxs"
                     /locus_tag="OQQ57_000148"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HCS1955045.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            complement(47078..47977)
                     /gene="ispA"
                     /locus_tag="OQQ57_000149"
     CDS             complement(47078..47977)
                     /gene="ispA"
                     /locus_tag="OQQ57_000149"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HCS1955046.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSPDTSALEALADYIIQRNK"
     gene            complement(47977..48219)
                     /gene="xseB"
                     /locus_tag="OQQ57_000150"
     CDS             complement(47977..48219)
                     /gene="xseB"
                     /locus_tag="OQQ57_000150"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HCS1955047.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            48425..49873
                     /gene="thiI"
                     /locus_tag="OQQ57_000151"
     CDS             48425..49873
                     /gene="thiI"
                     /locus_tag="OQQ57_000151"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HCS1955048.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIALQTE
                     QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNR
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            complement(49927..50517)
                     /gene="yajL"
                     /locus_tag="OQQ57_000152"
     CDS             complement(49927..50517)
                     /gene="yajL"
                     /locus_tag="OQQ57_000152"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HCS1955049.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLQVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(50480..51391)
                     /gene="panE"
                     /locus_tag="OQQ57_000153"
     CDS             complement(50480..51391)
                     /gene="panE"
                     /locus_tag="OQQ57_000153"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HCS1955050.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSANLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
                     PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            51559..52050
                     /gene="yajQ"
                     /locus_tag="OQQ57_000154"
     CDS             51559..52050
                     /gene="yajQ"
                     /locus_tag="OQQ57_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HCS1955051.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            complement(52178..53542)
                     /locus_tag="OQQ57_000155"
     CDS             complement(52178..53542)
                     /locus_tag="OQQ57_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1955052.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPA
                     YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFDVEQA
                     IRQA"
     gene            complement(53691..54581)
                     /gene="cyoE"
                     /locus_tag="OQQ57_000156"
     CDS             complement(53691..54581)
                     /gene="cyoE"
                     /locus_tag="OQQ57_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HCS1955053.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            complement(54593..54922)
                     /locus_tag="OQQ57_000157"
     CDS             complement(54593..54922)
                     /locus_tag="OQQ57_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HCS1955054.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL
                     NYNMMMH"
     gene            complement(54922..55536)
                     /locus_tag="OQQ57_000158"
     CDS             complement(54922..55536)
                     /locus_tag="OQQ57_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HCS1955055.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(55526..57517)
                     /gene="cyoB"
                     /locus_tag="OQQ57_000159"
     CDS             complement(55526..57517)
                     /gene="cyoB"
                     /locus_tag="OQQ57_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HCS1955056.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWANSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(57539..58486)
                     /gene="cyoA"
                     /locus_tag="OQQ57_000160"
     CDS             complement(57539..58486)
                     /gene="cyoA"
                     /locus_tag="OQQ57_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HCS1955057.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAEFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH"
     gene            complement(58947..60422)
                     /gene="ampG"
                     /locus_tag="OQQ57_000161"
     CDS             complement(58947..60422)
                     /gene="ampG"
                     /locus_tag="OQQ57_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HCS1955058.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(60466..61044)
                     /locus_tag="OQQ57_000162"
     CDS             complement(60466..61044)
                     /locus_tag="OQQ57_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1955059.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLAASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKITKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            61349..61666
                     /gene="bolA"
                     /locus_tag="OQQ57_000163"
     CDS             61349..61666
                     /gene="bolA"
                     /locus_tag="OQQ57_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HCS1955060.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            62010..63308
                     /gene="tig"
                     /locus_tag="OQQ57_000164"
     CDS             62010..63308
                     /gene="tig"
                     /locus_tag="OQQ57_000164"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HCS1955061.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDSAVEA
                     EDRVTIDFTGSVDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            63553..64176
                     /gene="clpP"
                     /locus_tag="OQQ57_000165"
     CDS             63553..64176
                     /gene="clpP"
                     /locus_tag="OQQ57_000165"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006809880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HCS1955062.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            64302..65576
                     /gene="clpX"
                     /locus_tag="OQQ57_000166"
     CDS             64302..65576
                     /gene="clpX"
                     /locus_tag="OQQ57_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HCS1955063.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            65764..68118
                     /gene="lon"
                     /locus_tag="OQQ57_000167"
     CDS             65764..68118
                     /gene="lon"
                     /locus_tag="OQQ57_000167"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HCS1955064.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENCVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            68327..68599
                     /gene="hupB"
                     /locus_tag="OQQ57_000168"
     CDS             68327..68599
                     /gene="hupB"
                     /locus_tag="OQQ57_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HCS1955065.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            68791..70662
                     /gene="ppiD"
                     /locus_tag="OQQ57_000169"
     CDS             68791..70662
                     /gene="ppiD"
                     /locus_tag="OQQ57_000169"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCS1955066.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
                     VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            70813..71184
                     /locus_tag="OQQ57_000170"
     CDS             70813..71184
                     /locus_tag="OQQ57_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HCS1955067.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA
                     QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            71278..71676
                     /gene="fadM"
                     /locus_tag="OQQ57_000171"
     CDS             71278..71676
                     /gene="fadM"
                     /locus_tag="OQQ57_000171"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain acyl-CoA thioesterase FadM"
                     /protein_id="HCS1955068.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(71728..72423)
                     /gene="queC"
                     /locus_tag="OQQ57_000172"
     CDS             complement(71728..72423)
                     /gene="queC"
                     /locus_tag="OQQ57_000172"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HCS1955069.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLR"
     gene            complement(72488..74188)
                     /locus_tag="OQQ57_000173"
     CDS             complement(72488..74188)
                     /locus_tag="OQQ57_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HCS1955070.1"
                     /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL
                     RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPG
                     ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
                     NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ
                     LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA
                     ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV
                     SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT
                     IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT
                     LLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQVMPDEE
                     NRFNALKAVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ
                     "
     gene            74288..75070
                     /gene="cof"
                     /locus_tag="OQQ57_000174"
     CDS             74288..75070
                     /gene="cof"
                     /locus_tag="OQQ57_000174"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HCS1955071.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTH"
     gene            75259..75717
                     /gene="decR"
                     /locus_tag="OQQ57_000175"
     CDS             75259..75717
                     /gene="decR"
                     /locus_tag="OQQ57_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DecR"
                     /protein_id="HCS1955072.1"
                     /translation="MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLED
                     DGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGE
                     YDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE"
     gene            75747..77363
                     /locus_tag="OQQ57_000176"
                     /pseudo
     CDS             75747..77363
                     /locus_tag="OQQ57_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
     gene            77513..78532
                     /locus_tag="OQQ57_000177"
     CDS             77513..78532
                     /locus_tag="OQQ57_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISEc11 family transposase"
                     /protein_id="HCS1955073.1"
                     /translation="MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNR
                     EPCLIGMEACGGSQHWARELTKLGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAVQQ
                     PGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREF
                     PEALERMKERLPPYLIMVLENQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPG
                     VGPLIATAAVATMGEASAFKSGREFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTL
                     FIHGARAVALVAKEPGPWITELKKRRPASVAIVAMANKLARTVWAITAHDRKYDRNHV
                     SIRPY"
     gene            78816..78962
                     /locus_tag="OQQ57_000178"
     CDS             78816..78962
                     /locus_tag="OQQ57_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001163619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HCS1955074.1"
                     /translation="MQHGHIAQRGNHDELAQQSGWYRDMYRYQQLEAALDDAPEIREE
                     AVDA"
     gene            78955..80736
                     /locus_tag="OQQ57_000179"
     CDS             78955..80736
                     /locus_tag="OQQ57_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HCS1955075.1"
                     /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
                     LISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT
                     DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM
                     FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
                     GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDR
                     PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
                     LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
                     ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
                     SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG
                     RYWQMYQLQLAGEELAASVREEESLSA"
     gene            80917..81255
                     /gene="glnK"
                     /locus_tag="OQQ57_000180"
     CDS             80917..81255
                     /gene="glnK"
                     /locus_tag="OQQ57_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HCS1955076.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            81285..82571
                     /gene="amtB"
                     /locus_tag="OQQ57_000181"
     CDS             81285..82571
                     /gene="amtB"
                     /locus_tag="OQQ57_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HCS1955077.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLMQVTVTFALVCILWVVYGYSLAFGEGNNFFGNVNW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
                     FIGYKLADLTVGLRVPEEQELEGLDVNSHGENAYNA"
     gene            complement(82620..83480)
                     /gene="tesB"
                     /locus_tag="OQQ57_000182"
     CDS             complement(82620..83480)
                     /gene="tesB"
                     /locus_tag="OQQ57_000182"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HCS1955078.1"
                     /translation="MSQALKNLLALLNLEKIEAGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            83698..84270
                     /locus_tag="OQQ57_000183"
     CDS             83698..84270
                     /locus_tag="OQQ57_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1955079.1"
                     /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
                     IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
                     LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINKGGTKADLTLVPVQQTAVPV
                     QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
     gene            complement(84301..84612)
                     /locus_tag="OQQ57_000184"
     CDS             complement(84301..84612)
                     /locus_tag="OQQ57_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HCS1955080.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
     gene            84775..84871
                     /gene="ffs"
                     /locus_tag="OQQ57_000185"
     ncRNA           84775..84871
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="OQQ57_000185"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            84991..85344
                     /locus_tag="OQQ57_000186"
     CDS             84991..85344
                     /locus_tag="OQQ57_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HCS1955081.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
BASE COUNT        20743 a        21113 c        22872 g        20624 t
ORIGIN      
        1 gtaaataatg gctctcaggt aaatgttact gattcctctc tggtatcaga taccattggt
       61 ttaaccaacg gttcttcact gaatattggt gcaaatggcg tggttgctac agaccacctg
      121 actgttgata gctacagtac cgttaattta accgaatcta ccggttggaa taattattct
      181 aatctgtata ccaatactat cactgtgact aacggtggtg tgctggatgt gaatgttgat
      241 cagttcgata ctgaagcttt ccgtactgat aaactggaac tgaccagcgg caacattgct
      301 gaccataatg gcaacgtaat ttctggtgtg ttcgacatca acagcagcga ttacgttctg
      361 aacgctgatc tggtgaacga ccgtacgtgg gatacttcca agtctaacta cggttacggt
      421 attgttgcta tgaactctga tggtcacctg actatcaatg gtaacggcga cgtagacaac
      481 ggtactgaac tggataacag ctctgttgat aacgttgttg ctgcaaccgg taactacaaa
      541 gttcgtatcg acaacgcaac tggcgctggc actatcgctg attacaaaga taaagaactt
      601 attcgggtaa acgacgctaa caccaacgcg accttctctg ctgctaacaa agctgacctg
      661 ggtgcataca cctatcaggc tgaacagcgc ggtaacaccg ttgttctgca acagatggag
      721 ctgaccgact acgctaacat ggcgctgagc atcccgtctg cgaacaccaa tatctggaac
      781 ctggaacaag acaccgttgg tactcgtctg accaactctc gtcatggcct ggctgataac
      841 ggcggcgcat gggtaagcta cttcggtggt aacttcaacg gcgacaacgg caccatcaac
      901 tatgatcagg atgttaacgg catcatggtc ggtgttgata ccaaaattga cggtaacaac
      961 gctaagtgga tcgtcggtgc ggctgcaggc ttcgctaaag gtgacatgaa tgaccgttct
     1021 ggtcaggtgg atcaagacag ccagactgcc tacatctact cttctgctca cttcgcgaac
     1081 aacgtctttg ttgatggtag cttgagctac tctcacttca acaacgacct gtctgcaacc
     1141 atgagcaacg gtacttacgt tgacggtagc accaactctg acgcgtgggg cttcggtttg
     1201 aaagccggtt acgacttcaa actgggtgat gctggttacg agactcctta cggcagcgtt
     1261 tctggtctgt tccagtctgg tgatgactac cagctgagca acgacatgaa agttgacggt
     1321 cagtcttacg acagcatgcg ttatgaactg ggtgtagatg caggttatac cttcacctac
     1381 agcgaagatc aggctctgac tccgtacttc aaactggctt acgtctacga cgactcaaac
     1441 aacgataacg atgtgaacgg tgattccatc gataacggta ctgaagggtc tgcggtacgt
     1501 gttggtctgg gtactcagtt cagcttcacc aagaacttca gcgcctatac cgatgctaac
     1561 tacctcggtg gtggtgacgt agatcaagac tggtccgcga acgtgggtgt taaatatact
     1621 tggtaatatt cttcactccg aagaaattct ggtaatttaa tctaaataat gcccgtcaag
     1681 gatttgacgg gcattactgc aaaggacgcg caaatgttat ctgtagttaa acctcttcag
     1741 gaatttggta agctcgataa atgtttgtcc agatacggta cgcgcttcga gtttaataat
     1801 gaaaagcaag ttatattttc cagtgatgtc aatagcgaag atactttctt tattttagag
     1861 ggcgttatct ctctgcgtag agaagaaaac gtacttatcg gtattaccca ggcttcttat
     1921 attatggggc tggctgatgg tttaatgaaa aacgatatac catacaaatt aatatcagaa
     1981 ggaaattgta cgggatatca tctaccagcc aaacaaacca ttacgcttat tgaacaaaat
     2041 caactctggc gagacgcttt ttactggtta gcctggcaaa atagaattct ggaattacgc
     2101 gacgtgcagc tcattgggca taattcctac gaacaaatcc gcgcaacatt attatcaatg
     2161 attgactgga atgaagaatt gcgatcacgt attggtgtga tgaattatat ccatcaacgt
     2221 acacgcatat cgcgttctgt cgtcgcagaa gttctcgctg ctttgcgtaa aggcggctat
     2281 atcgaaatga ataaaggcaa actggtcgct atcaactgtt tgccttcaga gtattaatca
     2341 ggatgcaggg ataaccaacg gtttattccc gcttagctcg gtcaccagat cattgatgcc
     2401 atcgctcata tttttaaagc gcgtcaacgg cgaacgagtg accaccacaa acgcgccaat
     2461 attcttctgc gggatcatcg ccatataggt aatgaaaccg ccaccaccgc ctgtcttctg
     2521 aataatcccc ggacgaccct ctttcggggc catatatacc cagcctaaac caagcgcatc
     2581 cgctttgccg gggacatcca tgccaatcac tttggtaaac tgcgcgcgct gataaatcaa
     2641 cgtctgcatg cgatctgcct ggttactgcg ctgataaaaa tcagatgata aatactgctg
     2701 catccagcgc atcatatcgc caggcgtgga atagacgccg ccgctgccaa ttgccgccag
     2761 cgtgttattg cacggactgg caccgcgctc agcaaccatt aaacggcggc actgatccgg
     2821 tgagggggtg taggtggtgt ctttcatccc caatggacgg gtaatctgct cttcaaacaa
     2881 ctgggtataa ggcttgccgg acgcattcgc cagtgcatct gccagcaggt cgaacgcaag
     2941 gttagagtac gccgcctgac tgcctggcgc ggctttcagc ttcgccgtag aaaggtattt
     3001 ccagcgttgc tcgcgcgttg gccagacaaa caccggacga tgtgccgcgc caccgggctg
     3061 ttcacggggc agggcgctgg tatgggttgc cagattcact agggtaatgg gcgtcccatt
     3121 gtaggttggc acgcgtgcgc ctggcggagc atatttactt agcggatcgt ttaacttcac
     3181 ggtcccctgg tcgagcaatt tcaccagcat ttcactggtc attagcttgg tgagggaagc
     3241 aatacgcacg accgaatcca gctgcgggcg aacgttatta ccaggtcgcg tttcgccata
     3301 actgcgaaag acgcgctggt taccgtcgat aacaaccagc gccatccccg tggcaccgct
     3361 gccgtaaaaa atatgatcgg cataacgatc gacaatatca gaggcaaact ccggttcagt
     3421 gatcggctgc gccgcatgga cggaggtcaa tgacgccgca cacagcacgg cagaaaaaag
     3481 cagactacgt ttcaacggtg gtgtccatag attgaatgaa ggtaactgag cgtatttata
     3541 ctactcattg atggattgca aagggcgaat tagtgcaata atagtgttaa aaacgtaacg
     3601 gcgcgtaaac acgatctttt tcctgctcac caatgcctgc atttgtgatc ctgcgcgtgt
     3661 taatccgctt atgtaaacaa tctttggttt gtgaaatccg tcgaaacaat tcttatggtc
     3721 aggctggcga actaagcgcc ttgctatggg tcacaatggg cggtttcatt tggctgacgc
     3781 tttgtagtgg tcatgcggtt aatacacagc agttgttaaa acgataagaa gttagcagga
     3841 gtgcatatgt ttaagtcttt tttcccaaag ccgggagcgt tttttctctc ggcctttgtt
     3901 tgggcattga ttgccgttat cttctggcaa gccggtgggg gagactgggt ggcgcgtatc
     3961 accggcgctt ccgggcagat cccgattagc gccgcgcgtt tctggtcgtt ggatttcctg
     4021 attttttacg cttactacat tgtttgcgta ggactttttg catttttctg gtttatctac
     4081 agcccgcacc gttggcaata ctggtcaata ctcggtactg cactgatcat cttcgtcacc
     4141 tggtttttgg tggaagtcgg agtcgccgtc aacgcctggt atgcaccgtt ctatgatctg
     4201 attcaaaccg cgctaagttc gccgcataaa gtcactatcg aacaatttta ccgcgaagtg
     4261 ggcgtctttc tggggattgc gctgatcgcg gtggtgatca gtgtactgaa caacttcttt
     4321 gtcagtcact atgtgttccg ctggcgtacg gcgatgaacg aatattacat ggcgaactgg
     4381 caacaactgc gtcatatcga aggtgccgca cagcgtgtgc aggaagacac catgcgtttt
     4441 gcttcaacgc tggagaatat gggcgtcagt tttatcaacg ccatcatgac gttggtcgcc
     4501 ttcctgccgg tgctggtaac gctctccgcg catgtgccgg agctgccgat tatcgggcac
     4561 attccgtatg gtctggtgat tgccgctatc gtctggtcgc tgatggggac cggattgctg
     4621 gcagtggtag ggatcaaact gccggggctg gagtttaaaa accagcgagt agaggccgcc
     4681 taccgtaaag agctggttta tggtgaagac gatgccacgc gcgcgacgcc gcctacggta
     4741 cgcgagctgt ttagcgccgt acggaaaaac tattttcgcc tctattttca ctatatgtat
     4801 ttcaacatcg cccgcattct ctatttgcag gtcgataacg ttttcggttt gttcttgctg
     4861 tttccgtcaa ttgttgccgg tacgattacg ctcggcctga tgacgcagat taccaacgtt
     4921 tttggtcagg ttcgcggtgc tttccagtac ctgattaact catggaccac actggttgag
     4981 ttgatgtcta tctacaaacg tctgcgcagc tttgaacatg agctggatgg tgacaaaatt
     5041 caggaagtaa cccatacctt gagctaaaaa ggagaagtaa tgtcgcgcgt caatcatcta
     5101 tcttcgctgt cattgttggc ggttctggtt ttagcggggt gtagtagtca ggctccgcaa
     5161 ccgttgaaaa agggcgaaaa agcgatagat gtagcgagcg tcgtgcggca gaagatgcct
     5221 gcgagcgtga aagaccgcga tgcctgggcg aaagatctcg ccaccacctt tgaaagtcag
     5281 gggctggcac cgacgctgga aaacgtctgc tcggtgctgg cggtggcgca gcaggagtca
     5341 aattatcagg cagatccggc cgttccgggc ttaagcaaga tcgcctggca agagattgac
     5401 cgtcgtgctg aacggatgca cattcctgct tttctggttc ataccgcgct aaaaatcaaa
     5461 tcgccaaacg gcaaaagtta tagcgaacgg ttagattcgg tgcgtacaga aaagcaattg
     5521 agcgcgattt ttgacgatct gatcagcatg gtaccaatgg ggcagacgct gtttggttcg
     5581 cttaatccgg tgcgcaccgg tgggccgatg caggtcagca ttgcttttgc cgaacagcat
     5641 accaaagggt atccgtggaa aatggacggt acagttcgtc aggaagtctt cagtcgccgc
     5701 ggcgggttgt ggtttggtac ttaccattta ctgaattatc ccgccagcta tagcgcaccg
     5761 atataccgct ttgctgattt taacgctggc tggtacgcca gccgtaatgc cgcgtttcag
     5821 aacgcggtca gtaaggccag cggcgtgaag ctggcactgg acggtgattt aattcgttac
     5881 gacagtaaag aacccgggaa aaccgaactg gcaacgcgca aactggcggg aaaactgggg
     5941 atgagcgaca gcgaaattcg ccgtcagtta gagaaaggtg acagcttctc ttttgaggag
     6001 acggcgctgt acaagaaagt ttatcaactt gccgaagcga aaacgggtaa atcactaccc
     6061 cgcgaaatgt tgcctggcat tcaactggaa agcccgaaaa tcacccgcaa cctgactacg
     6121 gcctggtttg cgaagcgcgt agacgaacgg cgggcgcgtt gtatgaaaca gtgatcaaac
     6181 aggaatgtca tgccagataa ggcgttttag gccgtatctg gcaacgtaaa tcttactggc
     6241 ggcgatgtcg ccagtgcagc catagcgcca ccactgcaaa aatgaggcag cctactaaaa
     6301 acgggatcag cccgaaaatg gtgccgacac ctaaaccaat ttccacccgt gggcgacctg
     6361 tttcctggac ctgcattaaa cgctcataga cgccgggcgc atgcactaac aggttcagca
     6421 attgcgcccc agcccaaaag caaaacagca caaacaacgc ataggcaatg ttgccaggcg
     6481 ttgaagaggc attgcgatat tttccgctaa acagcgattt tgacagggtg aaatcagcca
     6541 taaaaacctc cggaagtcat ctgcttctct tctggtgtga taccagcggc ttatggcaag
     6601 tctgacaggt catttagatt gtcaatatca gaatcatggt aaattgatgt tgggaatatt
     6661 cccgaagcgt gaatcttcgt tgtgagtcac aaaatggcaa ccttaagtta aatttattaa
     6721 caattacgaa aatgttgtct acaccacaga cggttgttac agaatatgca aggatgttgt
     6781 ttttcgttaa cggagctgcc atgaatctgc ctgtaaaaat ccgccgtgac tggcactact
     6841 atgcgttcgc cattggcgtt atattcattc ttaatggcgt ggtggggtta ctgggatttg
     6901 aagcaaaagg ttggcagacc tatgccgtcg gtctggtgac gtgggtgatt agtttctggc
     6961 tggcggggtt gattattcgt cgtcgcgatg aagaaactga aaacgcccaa taagaatatt
     7021 atcgggcgtt aaaatattac attgtggttt tcaatgcgtt atccgcagcg tgacgctcca
     7081 gcgccagctc aatcaaacgt gtgatcagat cggtgtaacc cagaccgctg gcttgccaca
     7141 gcttcggata catactgatg ttggtgaagc caggcagtgt gttgatctcg ttgatcacca
     7201 cttcgttctc tggggttaaa aacacgtcta cacgcgccat gcctgcgcat cccaacgttt
     7261 gataagcctg aacggcaatc gcccggatct tatcgttgat ttctggcgca atggctgccg
     7321 gaactaccac tttcgcgcca tcttcgtcaa tgtacttggt gtcgtaggca tagaagtcgc
     7381 tggtgagtac gatctcgcca caggtgctgg cttgcgggtt gtcgttgccc agaactgcgc
     7441 attcgatctc acgacctttg atcccttgct caacgatcac tttatgatcg aattcgaacg
     7501 ccagatcgac ggcaattgcg tactgttctt cactggttac tttgctgaca ccaacagaag
     7561 agccctgatt agccggtttt acaaacagtg gtaacctcag tttagactcc acttcggcaa
     7621 aactaatgtt gtgacgattg gcgcgcgtca gggtaataaa tggcgcaatg ttcagcccgg
     7681 catcgcgcag cagacgtttg gtaacatctt tatccataca ggctgctgaa gccagaacat
     7741 cagaacctac aaacggtaaa ttggcgaccc gcagcattcc ctgcaaggaa ccatcttcgc
     7801 ccagcgtacc gtggacaatc gggaaaatga catccaccgt cggtaacggc tgaccgtttt
     7861 gcgcgtcgat aagctgatgc tcatgtttac ttggcacctg cgcaaggcta gtcgccgaag
     7921 ggcgcaacgc aatatgggca ggatcgtctg catttagcag ataattgctg gcatcgctga
     7981 cgtgccattg cccttgttta tcaatgccca gcagcacaac gtcgaagcga cttttatcaa
     8041 tggcatcgac aatgtttttt gccgattgca gagacacttc atgttccgct gatttaccac
     8101 caaaaacgat tcctacccgc agtttttcca tcttaaaaac ctatcccgtc taacacaaag
     8161 tgcatacatt accacgacaa aacgggggat tcgcggcctt ctgacagaat gttgcaatct
     8221 tctgctgaca aagcgtgcaa cgtaatggtg aagaaagtgc gttattacaa agatgtgcgc
     8281 gagatcacaa aaatgatgaa cgggaagcta atttattcct ggcttaaatg gccatgcggt
     8341 gagttttttc tcttagttgt aagtaaacgc agagaatata tttcataact tttgtttata
     8401 ataaaggttg ataattaaag gcctgttctt tgtgtggtta attatttaaa tatgagaaac
     8461 gtttcgctgg taatcaaaca aagaacattt gcgcaaagta tttcctttgt cataaaaata
     8521 atacttccag acactatgaa gttgtgaaac ataatgttaa cttctccata cgttggataa
     8581 ggaaatacag acatgaaaaa tctcattgct gagttgttat taaagcttgc ccaaaaagaa
     8641 gaagagtcga aagaactgtg cgcgcaggta gaagctttgg agattatcgt cactgcaatg
     8701 cttcgcaata tggcacaaaa tgaccaacag cgcttgattg aacaggtgga gggggctctt
     8761 tacgaggtaa agcctgatgc cagcattcct gacgacgata cggagctgct gcgcaattat
     8821 gtaaagaagt tattgaagca tcctcgtcag taaaaagtta atcttttcaa cagctgtcat
     8881 aaagttgtca cggccgagac ttatagtcgc tttgttttta ttttttaatg tatttgtaca
     8941 tggagaaaat aaagtgaaac aaagcactat tgcactggca ctcttaccgt tactgtttac
     9001 ccctgtgaca aaagcccgga caccagaaat gcctgttctg gaaaaccggg ctgctcaggg
     9061 cgatattact gcacccggcg gtgctcgccg tttaacgggt gatcagactg ccgctctgcg
     9121 tgattctctt agcgataaac ctgcaaaaaa tattattttg ctgattggcg atgggatggg
     9181 ggattcggaa attacagccg cacgtaatta tgccgaaggt gcgggcggct tttttaaagg
     9241 tatcgatgcc ttaccgctta ccgggcaata cactcactat gcgctgaata aaaaaaccgg
     9301 caaaccggac tacgtcaccg attcggctgc atcagcaacc gcctggtcaa ccggtgtcaa
     9361 aacctataac ggcgcgctgg gcgtcgatat tcacgaaaaa gatcacccaa cgattctgga
     9421 aatggcaaaa gccgcaggtc tggcgaccgg taacgtttct accgcagagt tgcaggatgc
     9481 cacgcccgct gcgctggtgg cacatgtgac ttcgcgcaaa tgctacggtc cgagcgcgac
     9541 cagtgaaaaa tgtccgggta acgctctgga aaaaggcgga aaaggatcga ttaccgaaca
     9601 gctgcttaat gctcgtgccg acgttacgct tggcggtggc gcaaaaacct ttgctgaaac
     9661 ggcaaccgcc ggtgaatggc agggaaaaac gctgcgtgaa caggcacagg cgcgtggtta
     9721 tcagttggtc agcgatgccg cctcgctaaa tgcggtgacg gaagcgaatc agcaaaaacc
     9781 tctgcttgga ctgtttgctg acggcaatat gccagtgcgc tggctaggac cgaaagcaac
     9841 gtaccacggc aatatcgata agcccgcagt cacctgtacg cctaatccgc aacgtaatga
     9901 cagtgtacca accctggcgc agatgaccga caaagccatt gaattgttga gtaaaaatga
     9961 gaaaggattt ttcctgcaag ttgaaggtgc gtcaatcgat aaacaggatc acgctgcgaa
    10021 tccttgtggg caaattggcg agacggtcga tctcgatgaa gccgtacaac gggcgctgga
    10081 attcgctaaa aaggatggca acacgctggt catagtcacc gctgatcacg cccacgccag
    10141 ccagattgtc gcgccggata ccaaagctcc gggcctcacc caggcgctaa ataccaaaga
    10201 tggcgcagtg atggtgatga gctacgggaa ctccgaagag gattcacaag aacataccgg
    10261 cagtcagttg cgtattgcgg cgtatggccc gcatgccgcc aatgtcgttg gactgaccga
    10321 ccagaccgat ctcttctaca ccatgaaagc cgccctgggg ctgaaataaa accgcgcccg
    10381 gcagtgaatt ttcgctgccg ggtggttttt ttgctgttag caaccagact taatggcaaa
    10441 tctcgggcgc atacgctcat ggttaaaaca tgaagaggga tggtgctatg aaaattacat
    10501 tactggttac cttgcttttc ggtctggttt ttttaaccac agtcggcgct gccgagagaa
    10561 cgttaacccc acaacaacag cgtatgacct cctgtaatca gcaggcgacg gcgcaggcgt
    10621 tgaaagggga tgctcgtaag acctacatga gtgattgcct gaagaacagc aagtctgcgc
    10681 ctggtgaaaa aagtttgacg ccacagcagc aaaagatgcg cgaatgtaat aatcaagcaa
    10741 cgcaacaatc tctgaaaggt gatgatcgta ataagtttat gagtgcctgc ctcaagaaag
    10801 ccgcctgata cctgatagtg ctaacgggtg agctacgaaa gtggctcacc cgaaatttca
    10861 tacttctgcc tttagccccg tctctataat ttgggaaaat tgtttctgaa tgttcccaaa
    10921 aataatgaat gatgaaaact ttttcaaaaa agcggcggcg catggggagg aacctccttt
    10981 aactcctcaa aacgaacatc agcggtccgg gctgcgcttc gcccgtcgcg tcagactacc
    11041 ccgtgcggtt ggcctggctg gcatgttctt accgattgct tcaacgctgg tttcgcaccc
    11101 gccgccgggc tggtggtggc tagtgttggt cggctgggcg ttcgtctggc cgcatttagc
    11161 ctggcagata gcgagcaggg ccgtcgatcc gcttagccgg gaaatttaca acttaaaaac
    11221 cgatgcagta ttagcgggaa tgtgggtagg cgtaatgggc gtaaacgtgc tgccttccac
    11281 cgctatgttg atgattatgt gtctgaattt gatgggggca ggcggccccc gtctgtttgt
    11341 cgcgggtctg gtgttgatgg tggtttcctg ccttgtcacc ctcgagctta cgggcattac
    11401 cgtgtcgttc aatagtgcgc cgctggaatg gtggctctcc cttcccatta ttgtcgttta
    11461 tcctctgctg tttggctggg tcagctacca gacggcaacc aaactggcgg aacataaacg
    11521 caggttgcag gtcatgagta cccgcgacgg catgacgggc gtgtataacc gacgtcattg
    11581 ggaaactatg ttacgcaatg aatttgataa ctgtcggcgg cataatcgcg atgcaacgtt
    11641 actgattatc gatatcgacc atttcaagag catcaacgat acctggggtc atgatgtggg
    11701 cgatgaagcg attgtggcgc ttacccgaca gttacaaatt accctgcgcg gtagcgatgt
    11761 gattggtcgg tttggcggcg atgagtttgc agtaatcatg tccggtacgc cagctgagag
    11821 cgccattacc gccatgttac gggtgcgtga agggctaaac acgttacgct tgccgaatac
    11881 gccacaggta actttacgga ttagtgtggg ggttgcgccg ctgaacccac aaatgagtca
    11941 ctatcgtgag tggttgaaat cggcagattt ggcgctttac aaagcaaaga aagccggacg
    12001 taaccgcacc gaagtggcgg cctgacgtca ggcgaaagtc atcaggattt gctgagtttt
    12061 tctgattttt ccatacactt cgtcatcgct tcgatcactg cggcacggaa gcctttctct
    12121 tccagtacgc gtaccgcttc aatggtggtg cctcccggtg agcagaccat atctttcagt
    12181 gcccccggat gttctcccgt ttccagcacc atttttgcgg aacccattac cgcctgagcg
    12241 gcaaatttat acgcctgggc gcgtggcatc ccgcccagca cggcggcgtc ggccatcgct
    12301 tcgataaaca taaatacgta ggctggcgaa gaaccgctca caccgactac cgggtggatc
    12361 atcggctcag caattacttc cgcttcgcca aagcagcgga aaatattcag cacatcagcg
    12421 gtatcttctg gggttaccag cgcgtttggc gttacggagg tcatcccggc attaaccagc
    12481 gcgggagtgt tcggcatggc gcggataatt ttccggtcat ggcccagcgc gcgggcaagc
    12541 tggtcgagcg tgacacctgc agcaatagaa acgaccagag agtctttatt caggctggag
    12601 gtgatttcgc taagcacttt aatcatgatg ccaggtttaa cggcagcaaa aatgatgtcg
    12661 gcgatttgcg ccacttcttg cgccgattct gcggcgttga tgccgaactg gtcatgcagg
    12721 gcggcgactt tattcgggga gggggtgtat acccagattt gccctggaag cacctgaccg
    12781 ctggcaatca gaccgccgag aatggctttt cccatattgc cgcagccaat aaaaccgatt
    12841 ttcttttcca ttgcctcact cctgccgtga aattcattgt tttgataatc gctggcagaa
    12901 gcataaacag aactatgccg gaaggcaaaa gcgcgacaca atagaggatt acccaacaaa
    12961 ggatgacttt atgacaattt gggtggatgc tgacgcgtgt cccaatgtaa ttaaagagat
    13021 tttgtatcgc gcggcggaac gtatgcagat gccgctggta ctggtagcaa accagagttt
    13081 acgcgtgccg ccatcgcgat ttattcgtac gctgcgcgtc gcggcaggtt tcgacgttgc
    13141 cgataacgaa attgtccggc agtgtgaagc gggcgatttg gtgatcaccg cagatatacc
    13201 tttggctgct gaagccatcg agaaaggcgc agcggcgctt aatccgcgcg gcgaacgtta
    13261 cacgccagcg accattcgtg agcgcctgac gatgcgcgat tttatggata ccttacgtgc
    13321 cagtgggatc cagaccggcg gaccagatag cctttcacaa cgtgaccgcc aggcctttgc
    13381 cgcggagctg gagaagtggt ggctggaagt gcaacgtagt cgtggctaaa tgtaatttat
    13441 tatttacact tcattcttga atatttattg gtatagtaag ggatgtattg agattttcac
    13501 tttaagtgga attttttctt tacaatcgaa attgtactag tttgatggaa tgatcgctat
    13561 tctcatgaca ccggctttcg ccgcattgcg acctattggg gaaaacccac gatgacacaa
    13621 cctctttttc tgatcgggcc tcggggctgt ggtaaaacaa cggtcggaat ggcccttgcc
    13681 gattcgctta accgtcggtt tgtcgatacc gatcagtggt tgcaatcaca gctcaatatg
    13741 acggtcgcgg agatcgtcga aagggaagag tgggcgggat ttcgcgccag agaaacggcg
    13801 gcgctggaag cggtaactgc gccatccaca gttatcgcta caggcggcgg cattattctg
    13861 acggaattta atcgtcactt catgcaaaat aacgggatcg tggtttattt gtgtgcgcca
    13921 gtatcagtcc tggttaaccg actgcaagct gcaccggaag aagatttacg gccaacctta
    13981 acgggaaaac cgctgagcga agaagttcag gaagtgctgg aagaacgcga tgcgctatat
    14041 cgcgaagttg cgcatattat catcgacgca acaaacgaac ccagccaggt gatttctgaa
    14101 attcgtagcg ccctggcaca gacgatcaat tgttgatttt agagcgccta tacttaacgt
    14161 tcattccgtg aaataaggaa gaacgatgcc aacgaaaccg ccttatcctc gtgaagcata
    14221 tatagtgacg attgaaaaag gaaagccagg acagacggta acctggtacc aactcagagc
    14281 cgatcatcct aaaccagact cgttgatcag tgaacatccg accgctcagg aagcgatgga
    14341 tgcgaaaaaa cgctatgagg accctgacaa agagtgaccg catcagactg ctcggaaggg
    14401 attctgagtg ccactacaag ggatctgcgt cacatttttc ataattcatg tttttctaat
    14461 aattagaata ttaaacaata acaatccatt actggaatca tttggaatct ttacattatg
    14521 ccgtgcacgt ctgctgctac gctttttgtc atttgtagca caagtaagtg tcagcagtgg
    14581 tgcttcacac ttgcccggta attaacgacg aaagaaaagt aaggtggatg aacaatgagt
    14641 gcgtcgttgg cgatcctgac catcggcatt gtacctatgc aggaggtttt gccgctcctg
    14701 acggaataca ttgacgaaga taatatttcc catcatagcc tgctggggaa gttaagtcgt
    14761 gaagaagtga tggcggagta cgcgccagaa gcaggcgaag acaccattct cacattatta
    14821 aatgacaacc agctggccca tgtttcgcgt cgtaaagtgg agcgagacct gcaaggtgtg
    14881 gttgaagtgc tcgataatca gggttatgac gtcattttat taatgagtac agcaaacatt
    14941 agtagtatga ctgcgcgtaa tacgatcttt cttgagccgt cgcgaatatt gcctccactg
    15001 gtttcctcta ttgttgaaga tcatcaggtg ggggttatcg ttccggttga ggagatgctg
    15061 cccgttcagg cgcaaaaatg gcaaattttg cagaaatcgc cggtattttc attgggtaac
    15121 cccattcatg attcagaaca aaaaatcatt gatgcaggga aagaattact ggcaaaaggg
    15181 gctgatgtca tcatgctgga ttgtttagga tttcaccaac gtcatcgcga tttactgcaa
    15241 aaacagctcg atgttcctgt cttgctgtct aacgtattga ttgcacggct ggctgcggaa
    15301 ttactggtgt aattttgcgt gacagccagc gcctctggcc cctatagtga agtagatgtt
    15361 caactaccag acagggccag tttatgcttc aaagtaatga gtacttttcc ggcaaagtga
    15421 aatcaatcgg cttttccagc agcagcactg gtcgcgccag cgtgggtgtt atggttgaag
    15481 gcgaatacac cttcagcacc gctgagccgg aagagatgac ggtaatcagt ggcgcgctga
    15541 atgtgttact gcctgatgcg accgactggc aggtgtatga agccggttcg gtgtttaatg
    15601 ttcccggtca cagtgagttt catctgcaag ttgccgaacc cacctcttat ctgtgccgct
    15661 atctgtaatt cctcgccttc cccttgaacg ggagggcatt tttctgaaat atcctctctt
    15721 taacccataa taatatttcc tttgctgcga ttttttcaat ttccgatata ttcataattc
    15781 atcaaggttg atataaatat cagtgaagat ctccagatat tgttgcggaa ctggctacga
    15841 taaaagataa atcagatgat gaatggtggc gtgcattgct gcaaagtcgc aatgatcatt
    15901 tgcgccaaac ggcattacgc aacgcacata ccccggcgtc gttgttaacg acattgaccg
    15961 agtctcggca tcggtcgcta gctatgaata atccacagct cgctgccgat gtgaaaacga
    16021 cgtggttaaa agaggatcca tcattactct tatttgtcga acaacccgat ctttcgctgt
    16081 tacgggattt agtgaaaacc ggggcaatgc ggaaaattcg cagtgaagcg cgtcactggc
    16141 ttgaggaaaa acaatgacac aacgtccatg gagcaagtta cagcataaaa cgcataatat
    16201 tgctgcgcta aaaattattg tccgccgtag cgaataatta tatccctggt gtggcttcgt
    16261 acgccggata agacgcggca ggcgtcgcat ccggcattaa aggaaaatca gcaattaacg
    16321 ttgtgcttcg ccacctaatc cttcaatcag gttttgaatt aacgctgcca gttcaccagt
    16381 catcaggatg aaatcggcat caaaacgctg ggcgaaatct tcacggtcga tatcttcgtt
    16441 ttgatcgcgc agctcgtcgc aaaacttcag acgcttgagc gaaccatcgt cgcacatcac
    16501 aaactgaatg cgctgctgcc agtcgagcgc cagtttagtc accacttttc cggcttcgat
    16561 gtgattggtg atctcttcgc tggtcagatc ttgtttcttc gcgcggatca cgccgccatc
    16621 ttccagcaac gatttcagct cggcttcatc aagcagctgg aagccctgtg ccgcgctacc
    16681 ggagcgaacc cattcggtca gcgtcagttc aatcgggttt tccatgctca atggtaccac
    16741 aggtaacgac cccaggcttt tacgcagcag tgccagcgta tcttccgctt ttttggcact
    16801 ggcgcagtcc accataatca aaccgttaac cgtgtcgatc cacatcattg tctggctaaa
    16861 acggctgaaa gcacgcggca acagagagtg cagcacttcg tctttcagcg aatctttttc
    16921 ggttttcttc agcttacgcg cctgttccgc ttccagtttg gcgattttcg cttccagcgc
    16981 ctgcttaatc accggagacg ggaggatttt ttcttctttg cgcgcgcaga taacaatttg
    17041 accattggca acgtgcgtta acgcatcgct gtgcgatccc atcggaggaa cccagcccat
    17101 cttcgccatg tcctggctgc cgcatggggt aaatgccatc gaggctagct gtttttccat
    17161 ctcttctgca cgcagcgaaa tctcgcggct aagacggtaa accattaaat ttttgaacca
    17221 cagcatgata atttccacgg ccttgttgtt aaatttagcg ggcatgataa cgaattgtcg
    17281 gcggccttgc attgccaatc cggttgtccg tctctacgct attgatattg aaaaaaataa
    17341 ggagagtacc gtgcgtatag gtatcgattt aggcggcacc aaaactgaag tgattgcact
    17401 gggcgatgca ggggagcagt tgtaccgcca tcgtctgccc acgccgcgtg atgattaccg
    17461 gcagactatt gaaacgatcg ccacgttggt tgatatggcg gagcaggcga cggggcagcg
    17521 cggaacggta ggtatgggca ttcctggctc aatttcgcct tacaccggtg tggtgaagaa
    17581 tgccaattca acctggctca acggtcagcc attcgataaa gacttaagcg cgaggttgca
    17641 gcgggaagtg cggctggcaa atgacgctaa ctgtctggcg gtttcagaag cagtagatgg
    17701 cgcggcagcg ggagcgcaga cggtatttgc cgtgattatc ggcacgggat gcggcgcggg
    17761 cgtggcattc aatgggcggg cgcatatcag cggcaatggc acggcaggtg agtggggaca
    17821 caatccgcta ccgtggatgg acgaagacga actgcgttat cgcgaggaag tcccttgtta
    17881 ttgcggtaaa caaggttgta ttgaaacctt tatttcgggc acgggattcg cgatggatta
    17941 tcgtcgtttg agcggacatg cgctgaaagg cagtgaaatt atccgcctgg ttgaagaaag
    18001 cgatccggta gcggaactgg cattgcgtcg ctacgagctg cggctggcaa aatcgctggc
    18061 acatgtcgtg aatattctcg atccggatgt gattgtcctg ggggggggga tgagcaatgt
    18121 agaccgttta tatcaaacgg ttccgcagtt gattaaacaa tttgtcttcg gcggcgaatg
    18181 tgaaacgccg gtgcgtaagg cgaagcacgg tgattccagc ggcgtacgcg gcgctgcgtg
    18241 gttatggcca caagagtaaa aaacgtaggc aattggcgca tcatgcctga tgcgacgctt
    18301 gccgcgtctt atcaggcctg caaaatgtgc cagaaccgcg tagggcggat aaggcgttca
    18361 cgccgcatcc ggcaataagt aatgaacacc gagactataa cctaccccag tggtttcgcc
    18421 agcaccggag tatccgccgc ttgctggcgc ttatagcgac catacagcag caacgacgac
    18481 atcgcagcaa acgaaagcag ggcggcaggc agcgccacgt aattatatgc cagccccagc
    18541 gtcagcatca taccaccgca atatgcgccg acggcgctac cgaggttaaa cgctatttgc
    18601 ccacctgcgg cacctaataa ctctccgcct ttggcgtttt gtagtaacaa tatttgtagc
    18661 ggtgctgaaa gggcaaataa tcccgcgcaa caaataaaag caaaaataag cgacgttgtt
    18721 ttcatgccgc cgcagaaaaa gaacatcagc agtgccagta caattataaa gtcagtcact
    18781 gctgcaatgc gcagtggtga ataacgtcct gaaatcctgc cacttagcat atttcccagc
    18841 accatcccta gcccaactaa catcataata aaggtcatcg ccgtttccga aaaaccggaa
    18901 ataaacatca tgtatggctt tacgtagctg aaccaggcaa acacacctgc gttgccaaac
    18961 atggtggcgg cgaaaattaa ccacggggcc gggctgcgca aaaagtgaaa ttgttcgcgc
    19021 agctttcctt tcgcctcgtc gcgaatatcc ggcacccaaa aatagaccga tgccatcacc
    19081 gcaatattaa aaacagcgat caataaaaag gtgtaacgcc agctaaattc ctgacttaaa
    19141 tacgttccca gcggaatgcc cagcaaattg gcgactgtca tcccggaaac catccccgcc
    19201 acggcggcgg tgacttttcc gggtttgata atttttgata acacgatcgc gccgacgcca
    19261 aaaaatgcgc catgcggaaa gccggatacc agccgaccaa tggcgagcat caggtaagac
    19321 gaagagagcg tgaacatggc gttgccaatg acgcacaacg ccaccagaaa caacaagata
    19381 tgtttgagtg agtagcggct ggaaaagagt gcgatgattg gcgcaccgac caccactccc
    19441 agtgcataat acgagatcat atgcccggca gcaggaatcg aaattcctac gttatgcgcc
    19501 agctccgtga gcacgcccat aatgccaaat tcggccatcc ccaaaccaaa cgtgcccaga
    19561 gccaaagata aaatgacttt tttcatacca ccatcacaac caccagaacg gctaccaatc
    19621 accgtagcca ataaagtgat agcttgcagg ataacgacca gcaaggccaa gagataattc
    19681 gcccctctgt attcattatc ctgctgaata gttatttcac tgcaaacgta ctttccagtt
    19741 tgctgtagcc caggccgttg atctttttca ctttgatctg caccggaata cgctctttca
    19801 tcgcttctac gtggctaatc acaccgatgg ttttgccact ggcgttcagg gcatccagcg
    19861 catcaagggc ggtatccagc gtttcgctat ccagcgtgcc aaaaccttca tcaaggaaca
    19921 gcgagtcaat acgtgtttta tggctgacca gatccgaaag cgccagcgcc agactaacga
    19981 ggaaactttc gccgccggaa agggtacggg tatcgcgtac cgcatctgcc tgccaggtat
    20041 caacaacctc gacttccagc gcctcgctgg ctttgcgctg taacagatag cgcccgtgca
    20101 gccgggtaag ttgctgatta gcgagatgga ctaaattatc cagcgtcagc ccctgggcaa
    20161 acttgcggaa tttatcgccc tctttggaac ctattagcga attcagatat ccccagtcct
    20221 caacctgctg cgtcatttga gcaatttgct gcattaaggt ttgttgttgc tgacggttat
    20281 ctgcatcctg cttcagctgc tggcgaatct cgccttgact cgtggtgttt tcacgcaact
    20341 tttggtgagt ttgcgctaac tcttgctgaa tctgctccac cgtcacagtg agagccaacc
    20401 cgtcaggtcg gtgttgttga tgctgtgcca gcgtttctgc tgtctgagtg accagcgttt
    20461 gcgcctgacg gcgctggttt tccagattct gcttgagctg ttccagctgc gttagtgttt
    20521 gttcatccat tagcgccgca aggaacgcct gctgatcgtc aaagacgctg gcctgtagcg
    20581 cggtgtcaaa ctgcgcctgg gctttttgca gactttgcgc cgccagaaca tcctgttgct
    20641 gtaacgtctg ctgctggctg tgtaatgcga gacattgttc atgaacctgc cgccagttat
    20701 ccagcgccac agtttcttcg ctgtgcggga gatcatcact ttgcggcaac gtttccagaa
    20761 tcggcgtcag ctgctgaata cggttttgca gcgtggttaa ttcgttctgg cgttgctgcc
    20821 agctctgcgc ttcttgctga cgtgtcgcca accagctctc ttcttcatct tcctgtggca
    20881 atgtcagtgc ataacccgcc aatgccgtta agagctgctg ctggcgttgt tcaatttgct
    20941 gttgatactg gataatttgc tgattatgcg cggcaatctg cccttgtaat tcatgtcgtt
    21001 ggctgagtaa ccgcagctgg cgtttgtgct catcttgtgc atccagccac ggttgaatat
    21061 cgtcctgtgg ctgcaaggtg atattgaggc tggccgtgac ggcttgccat tgttgagtaa
    21121 gtgcttgctc atcttgtcgg aggctttgcg cttcgttttc atcgcgctga agctgcttcg
    21181 ttaatgcatc cagttgcccg cgcagcgccg caccttcttc gccgagcttt ttaacttcgt
    21241 tttccagcgc cagtaatcga gactgattaa caccaggctc cagcgcctga tacgccttga
    21301 ccgccgggtg gctggtggaa ccacaaagtg gacaaggctg acccgcctgt aactgtgcac
    21361 gctgggcttc cagcgttttg atgcgcgctt cctgctcgca aatggttttc acatcggcaa
    21421 gttgctgcgt cttttcttta taacgctggc gcatttcgtt aagtgcgaca ttacgttgcg
    21481 tctgttccag agatccattc tggatagtga ccattaactg cgccagacgt ttttgttggg
    21541 gaacaatctg cccatgcagc gcgaccaggc gctgacgcag tgggcgttgc tcagcatgtt
    21601 gcgccagggc ggtagcaact tcatcggcgg ttaacgtcaa cgtgatcgcc gcaagcgcat
    21661 taagtttttg ctcagcatgg gttaactgtt gctgccattg ccgcagatgc tcgcgatcgc
    21721 tggtttgttg ggagaactgc gcacgccaac ccgccagttc gttgttccac tgacggaagc
    21781 ggtcgtgttc ctgtaaccag gtattcaggc tttgttgctg ctgctgtaat tctgctgact
    21841 gcttcgccgc gtggtggcga atgctcgcgc gaagcgccat tgtgctctgt aagcgagtat
    21901 ttacttcttc aatctgctgg cgagtatgcg ccagcgccgc gctgtgttct gcgatgcgtt
    21961 cccagtgcgg acgaagattt cgtgccggtt gtgccagact gagcgccgcc agttgaggtt
    22021 gcgctttttc ttcttcggct aacgcctgtt gcaaggcctg ctgacggcgg ctggcttctt
    22081 gctgcaattc gtccagacgc gttaaccagt ttagtgattg ttgttcttgc tgctgcgcgg
    22141 taagtaactg tttttcttcg tcagtaagta cctgcaaact cgctgtcagc gattgcactt
    22201 gttccggcgt gagcaacgcg acgccgctgg cctgcgcttg cagcttctcc agctctgtgc
    22261 gggccgattt gtgctgctca aaaaccatcg ccgagatttg cccgtagatt tcagtgccgg
    22321 ttaactcctc gagcaattcc gcgcgttctt tgggtttggc attcaggaag gcagcaaatt
    22381 gcccctgcga aagcagcatc gaacgggtga agcgcccgta atccagcccg gttaacgtcg
    22441 ctgtcagttc cagcttatct ttcactttgt cggcgagaat tttgccgtcg gcgcagcgcg
    22501 ccagctctac gcgtggcacc tgcaaattac cgtcgggttg gttacgcgcc cgattctggc
    22561 tccagaatgc acggtacgct tcacctttca cttcaaactc cacctccgcc agacattcgg
    22621 cggtatcgcg ggtcatgaga tcattttgcg attgtgaaac gttagagaga cgcggagttt
    22681 cgtgatacag cgccagacaa atggcgtcca gcagggtggt tttccccgca ccggttgggc
    22741 cggtaatggc aaacagcccg ttgctggcga acggctcgcg ggtgaaatca atcttccatt
    22801 cgccttttaa tgagttcagg tttttcaggc gcaggctgag aattttcatg cttcgtgttc
    22861 tccggcgagg gtatgcaacg tcgtggtgaa aagatgctgc agacgttgct gctgcgattc
    22921 atccagttct tccagtgcca gacggcgatt gaacacctct tcgacgctga gttcgctgag
    22981 ggtttcacgc tgttggctgg ctaacacacg ctcgcgctgt tcacgactcc gacgtaccag
    23041 caatacttcg acaggcaatg attcggctaa tgcctggatt ttgcgctgaa tatcatgcag
    23101 atactcatca gtagtgattt cgatatccag ccagacaggt ggctcctgcg atacatcgcg
    23161 ccactgttcc agctgtgcgg taatcgacgc cagatcgcct ttcagcaccg ccatgggttg
    23221 agttaccggt acgttcaggt tttccacgct ctctaatttg ccgtttgaaa atgtcaccag
    23281 atggacatat ttactcttac cgcattcatc aaaactcagt ggaatggggg aaccgcaata
    23341 gcgaacatgt tccatgccgc caataatctg tgcgcggtga atatgcccga gcgcgatgta
    23401 gtcggctggt ggaaagtttt gtgccggaaa cgcgtccagc gtgccaatat aaatgtcacg
    23461 cacggcgtca cttttactgg cacccacggt cgttaaatgt cccgtggcga tgatgggcag
    23521 aggctgatcg ccgcgcagtt tgcaggcatc ggcatagtgt tgttggtaat aatcggtaat
    23581 cgctgccagt aaatgctgct gtttttcaat accgttaagc cccgcctggc tggaaataat
    23641 gtcacgcggg cgtaaaaacg gaatggggca cagcactgcg cctggcgtcc cgtcgcgacg
    23701 aggcaagatt tgcggcgcat gtccggcgct ggcgaccacg gttgtattga ggaacgccat
    23761 gatatcgcgc gattcattca gcgtggcgac cgagtcatgg tttcctgcca gtaccaccag
    23821 atgacagcca gtttgctgta aattgacaac aaaacggttg tataacgtgc gggcgtaact
    23881 gggcggcgag ccggtatcga aaacatcacc agcaacaata atcgcatcca cctgatgggt
    23941 ttgtgctgtc tccagcagcc agtcaagaaa agcctgatgt tcagcttcgc ggcttttact
    24001 gtagaagttc tggccgagat gccagtctga ggtgtgaagg atgcgcataa cggttccctg
    24061 gcgaaaaagc atggtcgcga ttatacccaa acagatgtgc catttgcttt tttctgcgcc
    24121 acggaaatca ataacctgaa gatatgtgcg acgagctttt cataaatctg tcataaatct
    24181 gacgcataat gacgtcgcat taatgatcgc aacctattta ttacaacagg gcaaatcatg
    24241 gcgagacgta ttctggtcgt agaagatgaa gctccaattc gcgaaatggt ctgcttcgtg
    24301 ctcgaacaaa atggctttca gccggtcgaa gcggaagatt atgacagtgc tgtgaatcaa
    24361 ctgaatgaac cctggccgga tttaattctc cttgactgga tgttacctgg cggctccggt
    24421 atccagttca tcaaacacct caagcgcgag tcgatgaccc gggatattcc agtggtgatg
    24481 ttgaccgcca gaggggaaga agaagatcgc gtgcgcggcc ttgaaaccgg cgcggatgac
    24541 tatatcacca agccgttttc gccgaaggag ctggtggcgc gaatcaaagc ggtaatgcgc
    24601 cgtatttcgc caatggcggt ggaagaggtg attgagatgc agggattaag tctcgacccg
    24661 acatctcacc gagtgatggc gggcgaagag ccgctggaga tggggccgac agaatttaaa
    24721 ctgctgcact tttttatgac gcatcctgag cgcgtgtaca gccgcgagca gctgttaaac
    24781 cacgtctggg gaactaacgt gtatgtggaa gaccgcacgg tcgatgtcca cattcgtcgc
    24841 ctgcgtaaag cactggagcc cggcgggcat gaccgcatgg tgcagaccgt gcgcggtaca
    24901 ggatatcgtt tttcaacccg cttttaacgc cttgctcatc ggacgcagag cagggcttat
    24961 gatttcttaa ctggagtatc ttacgtgctg gaacggctgt cgtggaaaag gctggtgctg
    25021 gagctgctac tttgttgcct cccggctttc atcctgggtg cattttttgg ttacctgccc
    25081 tggtttttgc tggcatcggt aacaggactg cttatctggc atttctggaa tttattgcgc
    25141 ctttcatggt ggttgtgggt ggatcgcagt atgaccccgc caccggggcg tggtagctgg
    25201 gaaccgctac tatacggctt acaccagatg cagctgcgaa ataaaaaacg ccgccgtgaa
    25261 ctgggcaatc tgattaaacg ctttcgtagc ggcgcggagt cgctgcctga cgcggtggtg
    25321 ctgaccacgg aagagggcgg tattttctgg tgtaacggtc tggcgcaaca aattcttggt
    25381 ttgcgctggc cggaagataa cgggcagaac atccttaacc tactgcgtta cccggagttt
    25441 acgcaatatc tgaaaacgcg tgatttttct cgcccgctca atctggtgct caacaccggg
    25501 cggcatctgg aaattcgcgt catgccttat acccacaaac agttgctgat ggtggcgcgt
    25561 gatgtcacgc aaatgcatca actggaaggg gcgcggcgta acttttttgc caacgtgagc
    25621 catgagttac gtacgccatt gaccgtgtta cagggttacc tggagatgat ggatgagcag
    25681 ccgctggaag gcgcggtacg cgaaaaagcg ttgcacacca tgcgcgagca gacccagcgg
    25741 atggaagggc tggtgaagca gttgctaacg ctgtcgaaaa ttgaagccgc gccgacgcaa
    25801 ttgctcaatg aaaaggttga tgtgccgatg atgctgcgcg ttgttgagcg cgaggctcag
    25861 actctgagtc agaaaaaaca gacatttacc tttgagatag ataacggcct caaagtgtct
    25921 ggcaacgaag atcagctacg cagtgcgatt tcgaacctgg tctataacgc cgtgaatcat
    25981 actccagaag gcacgcatat caccgtacgc tggcagcgag tgccgcacgg tgccgaattt
    26041 agcgttgaag ataacggacc gggcattgca ccggagcata ttccgcgcct gaccgagcgt
    26101 ttttatcgcg ttgataaagc gcgttcccgg caaaccggcg gtagcggatt agggttagcg
    26161 atcgtgaaac atgctgtgaa tcatcacgaa agtcgcctga atattgagag tacagtagga
    26221 aaaggaacac gtttcagttt tgttatcccg gaacgtttaa ttgccaaaaa cagcgattaa
    26281 tccgcctttg tcatctttta ttgccataag ccagtcgatg ctggcttatt ttctttgcag
    26341 tcaaaatacg ggcgttagat tttacaacgg ttggtgattt tttgttcgca tgattagcca
    26401 tgtctttttc acggaaatag tgttttatac tggttggtga tttcttatcg ctatatacct
    26461 ctggttttta gatccctcct tgctttaaaa cgttataagc gtttaaattg cgcttcaggt
    26521 gctgtcatac tgactgcatt aacgcggtaa atcgaaaaac tattcttcgc cgcgccaggt
    26581 tgggagtatt tcccgctaaa attgtttaaa tataccgctg tatcatcccc agggattggc
    26641 acaaaaattt aacgttacaa caccacatcc acaggcagta tgatttatga cccatcaatt
    26701 aagatcgcgc gatatcatcg ctctgggctt tatgacattt gcgttgttcg tcggcgcagg
    26761 taacattatt ttccctccaa tggtcggctt gcaggcaggc gaacacgtct ggactgcggc
    26821 attcggcttc ctcattactg ccgttggcct gccggtatta acggtagtgg cgctggcaaa
    26881 agttggcggc ggtgttgaca gcctcagcac gccaatcggt aaagtcgctg gcgtgctgct
    26941 ggcaacggtt tgttacttgg cggtggggcc gcttttcgct acgccgcgta cagctaccgt
    27001 ttcctttgaa gtggggattg cgccgctgac gggtgattcc gcgctgccgc tgtttatcta
    27061 cagcctggtc tatttcgcta tcgttattct ggtttcgctc tatccgggca agctgctgga
    27121 taccgtgggc aacttccttg cgccgctgaa aattatcgcg ctggtcatcc tgtctgttgc
    27181 cgctattgtc tggccggcgg gttctatcag cacggcgact gaggcttatc aaaacgctgc
    27241 gttttctaac ggcttcgtta acggctatct gaccatggat acgctgggcg caatggtgtt
    27301 tggtatcgtt attgttaacg cggcgcgttc tcgtggcgtt accgaagcgc gtctgctgac
    27361 ccgttatacc gtctgggctg gcctgatggc gggtgttggt ctgactctgc tgtacctggc
    27421 gctgttccgt ctgggttcag acagcgcgtc gctggtcgat cagtctgcaa acggcgctgc
    27481 tattctgcat gcttacgttc agcacacatt tggcggcggc ggtagcttcc tgctggcggc
    27541 gttaatcttc atcgcctgcc tggtaacggc agttggcctg acctgtgctt gtgcagaatt
    27601 ctttgcccag tacgtaccgc tctcttatcg tacgctggtg tttatcctcg gcggcttctc
    27661 gatggtggtg tctaacctcg gcttaagcca gctgatccag atctccgtac cggtgctgac
    27721 cgctatttat ccgccgtgta tcgcactggt tgtattaagt tttacacgct catggtggca
    27781 taattcgtcc cgcgtgattg ccccgccgat gtttatcagc ctgctttttg gtattctcga
    27841 cgggatcaaa gcatctgcat tcagcgatat cttaccgtcc tgggcgcagc gtttaccgct
    27901 ggccgaacaa ggcctggcgt ggttaatgcc aacagtggtg atggtggttc tggccattat
    27961 ctgggatcgc gcggcaggtc gtcaggtgac ctccagcgct cactaaatca ctgaacattt
    28021 gttttaacca cggggctgcg atgccccgtg gttttttatt gtgttgatgg gttaggaatt
    28081 gatggaaagt aagaacaagc taaagcgtgg gctaagtacc cgccacatac gctttatggc
    28141 actgggttca gcaattggca ccgggctgtt ttacggttcg gcagacgcca tcaaaatggc
    28201 cggtccgagc gtgttgttgg cctatattat cggtggtatc gcggcgtata tcattatgcg
    28261 tgcgctgggg gaaatgtcgg tacataaccc ggccgccagc tctttctcgc gttatgcgca
    28321 ggaaaacctc ggcccgctgg caggttacat taccggctgg acctactgct ttgaaatcct
    28381 aattgtcgcc atcgccgatg tgaccgcttt tggtatctat atgggtgtct ggttcccgac
    28441 ggtgccgcac tggatttggg tactgagcgt ggtgctgatc atttgcgccg taaacctgat
    28501 gagcgtgaag gtattcggtg agctggaatt ctggttctcg ttctttaaag tcgccaccat
    28561 catcatcatg attgtcgccg gtttcggcat catcatctgg gggattggca acggcgggca
    28621 accgaccggt attcataacc tgtggagcaa cggcggcttc ttcagtaacg gctggcttgg
    28681 catggtaatg tcgttgcaaa tggtgatgtt tgcttacggt gggatcgaaa ttatcgggat
    28741 taccgccggt gaagcgaaag atcctgagaa atcgattccg cgtgcgatta actccgtgcc
    28801 gatgcgtatt ctggtgttct acgtcggtac gctgttcgtc attatgtcta tctacccgtg
    28861 gaatcaggtt ggcactgccg gtagcccgtt cgtgctgacg ttccagcata tgggcattac
    28921 ctttgccgcc agcattctta actttgttgt gctgaccgct tcgctgtcgg caattaacag
    28981 tgacgtattt ggcgtaggcc gtatgctcca cggtatggca gagcagggca gcgcaccgaa
    29041 aattttcagc aaaacgtcgc gtcgcggtat tccgtgggtt acggtgctgg tgatgactac
    29101 cgcgctgctg tttgcggtgt atctgaacta catcatgccg gaaaacgtct tcctggtgat
    29161 cgcttcgctg gcaaccttcg ccacggtatg ggtgtggatt atgatcctgc tgtcgcaaat
    29221 cgccttccgt cgccgtttgc cgccagaaga agttaaggcg ctgaaattta aagtgccggg
    29281 tggggtagca acgaccatcg gcgggctgat tttcctgctc tttattatcg ggttgattgg
    29341 ttatcacccg gatacgcgta tctcgctgta tgtcggtttc gcgtggattg ttgtgctgtt
    29401 gattggctgg atgtttaagc gtcgccacga tcgtcagctg gctgaaaacc agtaatcctt
    29461 gcgttctgta agccggttca ggaggaaatc ctgatccggc tattccgaaa gttatccgcc
    29521 cccgtcctcc tcccccaaat atccttcaga tgatgagtga tcctgcatta ggctatggca
    29581 aggtgatcag attttcatca caggggaatt atgatgttaa atgcatggca cctgccggtg
    29641 cccccatttg ttaaacaaag caaagatcaa ctgctcatta cactgtggct gacgggcgaa
    29701 gacccaccgc agcgcattat gctgcgtaca gaacacgata acgaagaaat gtcagtacca
    29761 atgcataagc agcgcagtca gccgcagcca ggcgtcaccg cagggcttca gccgaatgcc
    29821 gccggcacga ctggagcagt ttgccgtcga tgtaccggat atcggcccac aatgggctgc
    29881 ggatcagatt ttttatcaga tcttccctga tcgttttgcg cgtagtcttc ctcgtgaagc
    29941 tgaacaggat catgtctatt accatcatgc agccggacaa gagatcatct tgcgtgactg
    30001 ggatgaaccg gtcacggcgc aggcgggcgg atcaacgttc tatggcggcg atctggacgg
    30061 gataagcgaa aaactgccgt atctgaaaaa gcttggcgtg acagcgctgt atctcaatcc
    30121 ggtgtttaaa gctcccagcg tacatcaata cgataccgag gattatcgcc atgtcgatcc
    30181 gcagtttggc ggtgatgggg cgttgctgcg tttgcgacac aatacgcagc agctgggaat
    30241 gcggctggtg ctggacggcg tgtttaacca cagtggcgat tcccatgcct ggtttgacag
    30301 gcacaatcgt ggcacggggg gagcttgtta caaccctgaa tcgccctggc gcgactggta
    30361 ctcgtttagt gatgatggca cggcgctcga ctggcttggc tatgccagct tgccgaagct
    30421 ggattatcag tcggaaagtc tggtgaatga aatttatcgc ggggaagaca gtattgtccg
    30481 ccattggctg acagcgccgt ggagtatgga cggctggcgg ctggatgtgg tgcatatgct
    30541 gggggaggcg ggtggggcgc gcaataatat gcagcacgtt gctgggatca ccgaagcggc
    30601 gaaagaaacc cagccggaag cgtatattgt cggcgaacat tttggcgatg cacggcaatg
    30661 gttacaggcc gatgtggaag atgccgccat gaactatcgt ggcttcacat tcccgttgtg
    30721 gggatttctt gccaataccg atatctctta cgatccgcag caaattgatg cccaaacctg
    30781 tatggcctgg atggataatt accgcgcagg gctttctcat caacaacaat tacgtatgtt
    30841 taatcagctc gacagccacg atactgcgcg atttaaaacg ctgctcggtc gggatattgc
    30901 gcgcctgccg ctggcggtgg tctggctgtt cacctggcct ggtgtaccgt gcatttatta
    30961 cggtgatgaa gtgggactgg atggtaaaaa cgatccgttt tgccgtaaac cgttcccctg
    31021 gcaggtggaa aagcaggata cggcgttatt cgcgctgtac cggcgaatga ttgtgctgcg
    31081 taagaaaagt caggcgctgc gtcgtggcgg ctgtcaggtg ctgtatgcgg aagataacgt
    31141 agtggtattt gtccgcgtgc tgaatcagca acgtgtactg gtggcaatca accgtggcga
    31201 ggcctgtgaa gtggtgctac ccgcgtcacc gtttctcaat gccgtgcaat ggcaatgcaa
    31261 agaagggcat gggcaactga ctgacgggat tctggctttg cctgccattt cggctacggt
    31321 atggatgaac taacgtttta taacgccttg tgtgacgcct gcgccatcat ccgcggataa
    31381 aactgccaga agcgggttcc gagggcggta taatgggcgt ttaaatcgta ccaggagtca
    31441 cgcagggcat ccagacgtgg gcgacggctt gccatgccgt ttaacacgtt ctggatgaaa
    31501 tccatatcgc gatagcgcac cagccactgc tctgaccaca agtaattgtt tagattgata
    31561 aaacgtggcg gtgagtccgg caaaatcgtc atcacttgct tgcgggcata acagataaat
    31621 tcctgtagcg gaaagtccgg cgacagctgc gaccagtggc gggaaagaaa gtgatcccac
    31681 atgacatcca gcgtaatagg cgcaacgcgg cgcgtttcac gacgaaacca ctcccgtgct
    31741 tcgcggactt ccggcagatt gtcagtcaat acgtcgatac gtcgatgcat atgaatgcca
    31801 gccacgacgt cgggcggaaa actttcttca ggatttccgc gtacgaaatc agccagtaaa
    31861 ttgccggaaa gcgagctttc cgcgagatgg gctaaatgca ggtgagctaa aaaattcatc
    31921 gattatattc tatccaaagg ggggtaaagg ttgcagggag agcgccccgg cactagacta
    31981 cccgcctctt attttagtct gagtcagtgt catgcgcgtt accgatttct tctttgaatt
    32041 gcccgaatcc ctgattgccc actaccccat gcctgaacgc agtagctgtc gtttactgtc
    32101 gctggacggg cctacgggcg cgctgacgca cggtactttc accgatttac tcgataagct
    32161 caaccccggc gatcttctgg tttttaataa tactcgcgtg atcccggcgc gcctgtttgg
    32221 gcgtaaagcc agcggcggca agattgaagt gctggttgag cggatgctcg acgacaaacg
    32281 cattcttgcg catattcgcg cctcgaaagc gccaaaacct ggcgcagaac tgctgctggg
    32341 cgatgacgaa agtattaacg caacaatgac cgcgcgccac ggcgcactgt ttgaagtcga
    32401 attcaatgat gatcgttcgg tactggatat cctcaacagt atcgggcata tgccgctgcc
    32461 gccgtatatc gaccgtccgg acgaagacgc tgaccgcgaa ctttatcaaa ccgtttatag
    32521 cgaaaaaccg ggcgcggttg cagccccgac cgctggtctg cattttgacg agcctttgct
    32581 ggaaaaattg cgcgccaaag gcgtggagat ggcgtttgtg acgttgcacg ttggtgcggg
    32641 caccttccag ccggtgcgcg tcgacaccat tgaagatcac atcatgcact cggaatacgc
    32701 tgaagtaccg caggatgtgg tagacgcggt actggcggcg aaagcgcgcg gtaaccgggt
    32761 gattgcggtt ggcaccactt cagtacgttc gctggaaagc gcggctcagg cagcgaaaaa
    32821 cgatctcatt gaaccgttct tcgacgatac ccaaatcttt atctatccgg gcttccagta
    32881 caaagtggtc gatgcgctgg tgacgaactt ccacttgcca gagtcgacgc tgattatgct
    32941 ggtttcggcc tttgccggtt atcaacacac catgaacgcc tataaagcag cggtagaaga
    33001 gaaatatcgc ttttttagtt acggtgatgc gatgtttatt acgtacaatc cgcaggcaat
    33061 taatgagcgc gtcggggagt aattccgcgg cgctggttta aaacgttgga ctgtttttct
    33121 gacgtagtgg agaaaaaatg aaatttgaac tggacaccac cgacggtcgc gcacgccgtg
    33181 gccgcctggt ctttgatcgt ggcgtagtgg aaacgccttg ttttatgcct gttggcacct
    33241 acggcaccgt aaaagggatg acgccggaag aagttgaagc cactggcgcg caaattatcc
    33301 tcggcaacac cttccacctg tggctgcgcc cgggccagga aatcatgaaa ctgcacggcg
    33361 atctgcacga ttttatgcag tggaaggggc cgatcctcac cgactccggg ggcttccagg
    33421 tcttcagcct tggcgatatt cgtaaaatca ccgaacaggg cgtgcacttc cgtaacccga
    33481 tcaacggcga tccaattttc ctcgatcctg aaaaatcaat ggagattcag tacgatcttg
    33541 gttcggatat cgtcatgatc tttgatgagt gtacgccgta tcctgctgac tgggattacg
    33601 caaaacgctc catggagatg tctctgcgtt gggcgaagcg tagccgtgag cgttttgaca
    33661 gtctcggaaa caaaaatgcg ctgtttggta tcattcaggg cagcgtttac gaagatttac
    33721 gtgatatttc tgttaaaggt ctggtagata tcggttttga tggctacgct gtcggcggtc
    33781 tggctgtggg tgagccgaaa gcagatatgc accgcattct ggagcatgta tgcccgcaaa
    33841 ttccggcaga caaaccgcgt tacctgatgg gcgttggtaa accagaagac ctggttgaag
    33901 gcgtacgtcg tggtatcgat atgtttgact gcgtaatgcc aacccgcaac gcccgaaatg
    33961 gtcatttgtt cgtgaccgat ggcgtggtga aaatccgcaa tgcgaagtat aagagcgata
    34021 ctggcccact cgatcctgag tgtgattgct acacctgtcg caattattca cgcgcttact
    34081 tgcatcatct tgaccgttgc aacgaaatat taggcgcgcg actcaacacc attcataacc
    34141 ttcgttacta ccagcgtttg atggcgggtt tacgcaaggc tattgaagag ggtaaattag
    34201 agagcttcgt aactgatttt taccagcgtc aggggcgaga agtaccacct ttgaacgttg
    34261 attaatatta ataatgaggg aaatttaatg agctttttta tttctgatgc ggtagcggca
    34321 acgggtgcac cggcgcaagg tagcccgatg tctttgattt tgatgctggt ggtattcggt
    34381 ctgattttct atttcatgat cctgcgtcca cagcagaagc gcaccaaaga acacaaaaag
    34441 ctgatggact ccattgccaa aggtgatgaa gttctgacga acggtggcct ggttggtcgc
    34501 gtaaccaaag tagcggaaaa cggctacatt gctatcgcgc tgaatgacac cactgaagta
    34561 gttattaaac gtgacttcgt agctgccgtc ctgccgaaag gcaccatgaa ggcgctgtaa
    34621 ttaaaatttt tccctaaggg aattgccgtg ttaaaccgtt atcctttgtg gaagtacgtc
    34681 atgctgatcg tggtgattgt catcggtctg ctgtatgcgc ttcccaacct gtttggtgag
    34741 gatccggctg ttcagatcac tggtgcgcgc ggagtcgccg ccagtgagca aacgctgatc
    34801 caggtccaga aaacgttaca agaagaaaaa ataactgcta agtctgtggc actggaagag
    34861 ggcgctattc ttgcgcgctt cgactccact gacacccagc tgcgcgctcg tgaagcatta
    34921 atgggcgtta tgggtgacaa atacgtcgtg gcgcttaacc ttgccccggc aacgccgcgc
    34981 tggctggcag ctattcacgc tgagccgatg aagctcggcc ttgacctgcg tggcggcgtt
    35041 cacttcctga tggaagtgga tatggacacc gcgcttggca aactccagga acaaaatatc
    35101 gatagcctgc gcagcgatct gcgtgaaaag ggcatcccgt ataccaccgt tcgtaaagaa
    35161 aacaactacg gcctgagcat tactttccgc gatgctaaag ctcgtgatga agccattgcg
    35221 tatctgagca agcgccatcc ggacctggtg attagtagcc agggcagcaa ccagctgcgt
    35281 gcggtaatga gcgatgctcg tctgagtgaa gcgcgtgaat atgcggtgca gcagaacatc
    35341 aatatcctgc gtaaccgtgt aaaccaactt ggcgtagcgg agccggtggt tcagcgtcag
    35401 ggtgctgacc gtatcgttgt tgaactgcca ggtattcagg acactgcgcg tgcgaaagag
    35461 attctgggtg cgacggcaac gctggaattc cgtctggtaa acaccaacgt tgaccaggcc
    35521 gctgcggcat ccggtcgcgt accgggcgac tctgaagtga aacagacccg cgaaggtcag
    35581 ccagttgtgc tgtacaaacg cgtaattctg accggtgacc atatcaccga ctccacttcc
    35641 agccaggacg aatacaacca accgcaggtt aacatctcgc tcgatagcgc tggtggtaac
    35701 atcatgtcta acttcactaa ggacaacatc ggcaaaccga tggcaaccct gtttgtggag
    35761 tacaaagaca gcggtaagaa agatgcaaat ggtcgtgcgg ttctggtgaa acaggaagag
    35821 gtgattaaca tcgccaacat ccagtctcgt ctgggtaaca gcttccgtat caccggcatc
    35881 aacaacccga acgaagcccg tcagctgtca ctgctgctgc gtgccggtgc gttgatcgcg
    35941 ccgattcaga ttgttgaaga acgtaccatt ggcccaaccc tgggtatgca gaacattgaa
    36001 caggggctgg aggcttgcct tgccggtctg ctggtttcta ttctgttcat gatcatcttc
    36061 tataagaagt ttggtctgat tgcgaccagt gctctgattg ccaacttgat cttaatcgtc
    36121 ggcattatgt cgctgttgcc aggcgcaacg ctgagtatgc caggtatcgc gggtatcgtc
    36181 ttaacccttg cggtggcggt cgatgcgaac gtactgatca acgaacgtat taaagaagag
    36241 ttgagcaacg gacgtactgt tcaacaggca attgatgaag gttatcgtgg cgcattcagt
    36301 tctatcttcg atgcgaacat caccacgctg attaaagtca tcatcctgta cgcagtgggt
    36361 accggggcaa ttaaagggtt cgcgattact accggtatcg gtgtggcgac gtcgatgttt
    36421 accgcgattg tcggtacgcg tgccatcgta aacctgctat atggcggcaa gcgcgtcaag
    36481 aagctgtcaa tctgaggagt gcgatgtggc acaggaatat actgttgaac aactaaacca
    36541 cggccgtaaa gtctatgact ttatgcgctg ggactactgg gctttcggca tctctggtct
    36601 gctgttaatc gccgctatcg ttattatggg cgtgcgcggc tttaactggg ggctggattt
    36661 caccggtggt acggttatcg aaattacgct cgaaaaaccg gctgaaattg acgtaatgcg
    36721 tgatgcattg caaaaagccg gttttgaaga gccaatgctg caaaactttg gtagcagcca
    36781 cgacatcatg gtccgtatgc cgcctgctga aggcgaaacc ggcggtcagg tgctgggcag
    36841 ccaggttctg aaggtgatta acgaatccac caatcagaat gcagcagtga agcgtattga
    36901 gttcgtcggt ccgagcgtgg gggcagacct tacgcaaacc ggtgcgatgg cgttgatggc
    36961 ggcgctgctg tctatccttg tgtacgtagg ttttcgcttt gagtggcgac tggcggcagg
    37021 ggttgttatt gcgctggcgc acgacgttat cattacgctg ggtattttgt cgttattcca
    37081 tatcgagatt gacctgacca ttgtggcatc gttgatgtcg gttatcggtt actcgcttaa
    37141 cgacagtatc gtggtatcgg accgtattcg tgaaaacttc cgcaagatcc gtcgcggtac
    37201 gccttacgaa atctttaacg tgtccttgac ccagacgctg caccgtacct tgatcacatc
    37261 cggtactacc ttgatggtta tcctgatgct gtacctcttc ggtggtccgg tactggaagg
    37321 cttctcgctg accatgctta tcggtgtttc tatcggtact gcatcttcca tctatgtggc
    37381 atctgcgttg gctctgaaac tgggtatgaa gcgcgaacac atgttgcagc agaaagtgga
    37441 aaaagaaggg gcggatcagc cgtcaattct gccgtaatca agttcccgtt gatgttgaaa
    37501 atcccggtca gaagatcggg attttttttg atgtatggag attgcgaaaa tccccgcatc
    37561 ttgggaaact gcgcgtaacc ctacatttca tccaggtaac tcttcatggc tatcatccca
    37621 aaaaactatg cgcggttaga aagcggctat cgcgaaaaag cattaaaaat atatccgtgg
    37681 gtctgcggtc gctgttcccg cgagtttgtt tattccaacc tgcgtgaact taccgttcac
    37741 cacattgatc acgaccatac caataacccg gaagatggca gtaactggga attgctttgt
    37801 ctctattgcc acgatcatga gcattcgaaa tataccgaag cggatcagta tggtacgacc
    37861 gttatcgcag gggaagatgc gcagaaagat gtcggtgaag cgaagtacaa cccattcgct
    37921 gacctgaaag cgatgatgaa caagaagaag tgattaaaac gtaaaattgc ctgatgcgct
    37981 acgcttatca ggcctacgtt atttcagcaa tatattgaat ttacgtgctt ttgtgggccg
    38041 gacaaagcgt ttacgccgca tccggcatga acaaagctca cgttgttaac aatcagaaat
    38101 gccgggaata aatcccggca ttttcataat cagaagttgt aacctactac caggtaacca
    38161 ccccagccgg tagagcgaac gttgaagttg ccgttgccga agttcagttc tgcatcgtcg
    38221 ttccactgac caccgtcgtg ccagtaacga gctacgacag agtagtgcca gtgatcgtag
    38281 ttcagagcca gaatatggct ggaagcgata gagttattag tacgggtctt aataccgttg
    38341 attgcgttac cgctgtcatc ccctaaatcg gaaccccagt cgaagttggt gaagccgatg
    38401 tagctcagct gaccgcccca cagatcggta atcggcacaa agtatttaat tttgaaacgg
    38461 taaccgtccc actcgttttc gttcgctgcg ccatagttct gccactggta tttcgcatag
    38521 acgttcatgg acaggctcat cggcagacca gtatcgatgt cggtacccag acccatgtac
    38581 caggtgctct ggcgaccatt tttattacga cccatgtcgt aaatgtagtt gttcgcgaag
    38641 taccactctt tgaacggacc gaagttaagg tcagtattgg tcagcttgtc gatggagaaa
    38701 cgtggttcga tttccataaa cagcggagaa ccgtggttcc agataccttt agcatcggag
    38761 ttaccgccga agaataccgg cgcatccgca taaccataga agtcgaacca gtctttttta
    38821 gcgaatgctt cgtactcaag gtaggtatcg ttgcggatct gcggtccgaa acgggtgtga
    38881 tagcttccga caacgttaac gctctggtgc caccagtcgg aaagatactg cggtttgtcg
    38941 ttttcagctg cgttgacagt aaaagacgaa gagagcgcca gtaccgcacc ggctgccagt
    39001 aatgtttttt tcatatgtat gccactgttt gaaaatccct tgcgggagtg aaaaaggcgc
    39061 aaattgcgtt tctaaatatt tcgtatacag aggagcctat tataaaaatc attgctcaca
    39121 aaaatatgtt tcgtttcaca gttctatcat ttacgtaatc gattgcgttc acgtttacac
    39181 acattcgggc ggggattgta ctgactttcg cccttgttgc aaacttttac tatcaatcca
    39241 ggtgatgtaa gcagagtaac aaaatgacgg ggaaagatgt tgcgggacgc acaaaatcgt
    39301 cccgaaatac gtttactgca taacaggttg aatgtcgtgg atacgtacaa agcctaactg
    39361 atccacagaa atccccttta attgtaacgg aatatcaaca tcgctggggg cgaggacgct
    39421 ggcaggggca ttaatcaatt gattctgcac attgatttcc tgaaagttgt ctattgttcc
    39481 ctgaatttgc ccatattcaa cagttccgct gaatgcgggc aagggatcat tcgactcacc
    39541 ctgaatacgt agtgtaaggg tggtgccatc tgtatcaggc gtaatattca ccagcgacat
    39601 acgtaaagta ccgatctggc tttccagtct tgccggtgtt ttcgctccag gcagaaggta
    39661 acccccactg ctggattttg cattcagcct gttttgctga gtgattttga ctgtttcttg
    39721 attgagttgc gtcatctcct ggttcagcgt gctgacgctg tgtttcatct gtcgcacttc
    39781 actttgctgc acacaggcgc taaggctgaa caggcttccc agcaggagca gtcgaaaaac
    39841 gttagtattc ataggtcgtc cctttctcgt cgcaattagc ctaatggtag agggtaaaag
    39901 cagcgaaagc atcgatcctt tatctcaaaa gcgttgcgcc tttgttgtat cgtcagttca
    39961 gggtaaaata gatttccgtt aaccacctgg tcaggacgcc gtatgcattg cccattctgt
    40021 ttcgccgtgg acactaaggt aattgactct cgtctcgtgg gcgagggttc atccgtacgc
    40081 cgccgtcggc agtgtctggt gtgtaatgaa cgtttcacca cctttgaagt ggcggagctg
    40141 gttatgccgc gtgttgtaaa aagcaacgac gtgcgtgaac cgtttaatga agagaaattg
    40201 cgtagcggaa tgctgcgggc gctggaaaaa cgtccggtga gttccgatga cgttgaaatg
    40261 gcaatcaatc atattaaatc gcagctgcgc gccaccggtg agcgcgaagt accgagcaag
    40321 atgattggca atctggtgat ggagcaattg aaaaagctcg ataaagtcgc ctatatccgt
    40381 tttgcctctg tctaccgcag tttcgaagat atcaaagaat ttggcgaaga gatcgcgcgc
    40441 ctggaggact aagccgtgca ggacgagtat tacatggcgc gggcgctaaa gctggcgcaa
    40501 cgaggacgtt ttaccaccca ccccaaccca aatgtcgggt gcgtcattgt caaagatggc
    40561 gaaattgtcg gtgaaggtta ccatcaacga gcgggtgaac cacatgccga agtacacgcg
    40621 ttgcgtatgg cgggtgaaaa agccaaaggt gcaacggcgt atgtgacact cgaaccttgc
    40681 agccatcacg gccgtacgcc gccttgctgt gatgctttaa ttgccgcagg tgtggcgcgc
    40741 gtggttgcct cgatgcaaga tcctaacccg caggtcgctg ggcgtggact ttaccgtctg
    40801 caacaggctg gcattgacgt cagccacggc ctgatgatga gtgaagccga gcaattgaat
    40861 aaaggctttc tcaagcggat gcgcaccggc tttccttata ttcagttaaa acttggcgca
    40921 tcgcttgatg gtcgcacggc gatggcgagc ggcgaaagcc agtggatcac ttcgccccag
    40981 gcgcggcgtg atgtacaacg actgcgcgcg caaagtcatg ccattttaac cagcagcgcc
    41041 acggtgctgg cggatgatcc tgccttaacg gtgcgttggt ccgaactgga tgaacaaact
    41101 caggcgctct acccgcaaca aaatctccgc cagccggtac gtattgtgat tgatagccaa
    41161 aatcgcgtga cgccggaaca tcacattgtg cagcagcccg gcgaaacctg gttcgcgcgt
    41221 acgcaggaag attctcgtga gtggccggaa acggtgcgta ccttgctgat tccagagcat
    41281 aaaggtcatc tggatctggt tgtactgatg atgcaactgg gtaaacagca gattaacagc
    41341 atctgggggg aagcggggcc aacgctcgct ggcgcattgc tgcaggcggg tttagtcgat
    41401 gagctgattg tctatatcgc acctaaacta ttaggcagcg acgcccgtgg attatgcacc
    41461 ctgccagggc ttgagaaatt agccgacgcc ccccaattta aattcaaaga gatacgtcat
    41521 gtaggcccgg atgtttgcct gcatttagtg ggtgcatgat ctcccggctc gaaagggaag
    41581 cagcgcacga aatattatgc taaaatccgc ccccctgcgg ggccatactc gaacccgaag
    41641 gaagaaaatg aacattattg aagctaacgt tgctaccccg gacgctcgcg tcgccatcac
    41701 catcgcgcgt ttcaacaact ttatcaatga cagcctgctg gaaggtgcaa ttgacgcact
    41761 gaaacgtatc ggtcaggtaa aagatgaaaa cattaccgtt gtttgggtgc ctggtgccta
    41821 tgagctgccg ctggcggcgg gtgcactggc taaaaccggt aaatacgacg cggtgattgc
    41881 gctgggtacg gttattcgtg gtggcactgc ccattttgaa tatgtcgctg gtggtgcaag
    41941 caacggcctg gcgcatgttg cccaggacag cgaaattccg gttgcttttg gggttctgac
    42001 cactgaaagc attgaacaag cgatcgaacg tgctggcacc aaagctggca acaaaggtgc
    42061 agaagctgca ctgaccgcgc ttgaaatgat taatgtattg aaagccatca aggcctgaaa
    42121 ttagtaaggg gaaatccgtg aaacctgctg ctcgtcgccg cgctcgtgag tgtgccgtcc
    42181 aggcgctcta ctcctggcag ttgtcccaga acgacatcgc tgatgttgaa taccagttcc
    42241 tggctgaaca ggatgtaaaa gacgttgacg tcctgtactt ccgtgagctg ctggccgggg
    42301 tggcgactaa taccgcatac ctcgacggac tgatgaagcc atacctgtcc cgtctgctgg
    42361 aagaactggg acaggtagaa aaagcagtac tgcgcattgc gctgtacgaa ctgtctaaac
    42421 gtagcgatgt gccatacaaa gtggccatta acgaagcgat cgaactggcg aaatcgttcg
    42481 gcgcagaaga cagccataag ttcgtcaacg gtgtactcga taaagcagca cctgtgattc
    42541 gccctaacaa aaagtaatat ccaggccggt agattcacgg aagaccgttc catgatcgcc
    42601 ggccttttct tttttacctg ctgaggcata acgtatggca tgtggcgagt tctccctgat
    42661 tgcccgttat tttgaccgtg taagaagttc tcgtcttgat gtcgaactgg gcatcggcga
    42721 cgattgcgca cttctcaata tccccgagaa acagaccctg gcgatcagca ctgatacgct
    42781 ggtggcgggc aaccacttcc tccctgatat cgatcctgct gatctggcgt ataaagcact
    42841 ggcggtgaac ctaagcgatc tggcagcgat gggggccgat ccggcctggc tgacgctggc
    42901 attaaccttg ccggacgtag acgaagcgtg gcttgagtcc ttcagcgaca gtttgtttga
    42961 tcttctcaat tattacgata tgcaactcat tggcggcgat accacgcgtg ggccattatc
    43021 aatgacgttg ggtatccacg gctttgttcc gatgggacga gccttaacgc gctctggggc
    43081 gaaaccgggt gactggatct atgtgaccgg tacaccgggc gatagcgccg ccgggctggc
    43141 gattttgcaa aaccgtttgc aggttgccga tgctaaagat gcggactact tgatcaaacg
    43201 tcatctccgt ccatcgccgc gtattttaca ggggcaggca ctgcgcgatc tggcaaattc
    43261 agctatcgat ctctctgacg gtctgatttc cgatctcggg catatcgtga aagccagcga
    43321 ctgcggcgta cgtattgacc tggcattgct gccgttttct gatgcgcttt ctcgccatgt
    43381 tgaaccggaa caggcgctgc gctgggcgct ctctggcggt gaagattacg agttgtgttt
    43441 cacggtgccg gaactgaacc gtggagcgct ggatgtggct ctcggacacc tgggcgtacc
    43501 gtttacctgt atcgggcaaa tgaccgccga tatcgaaggg ctttgtttta ttcgtgacgg
    43561 tgaacctgtt acgttagact ggaaaggata tgaccatttt gccacgccat aaagatgtcg
    43621 cgaaaagtcg cctgaagatg agtaatccgt ggcatctact tgctgtcgga ttcggaagtg
    43681 gattaagccc gatcgttcct gggacgatgg gctcgctggc agcgattccg ttctggtatc
    43741 tgatgacctt tttgccctgg cagctctact cgctggtggt gatgctgggg atctgtatcg
    43801 gcgtctatct ttgtcatcag accgcaaaag atatgggcgt gcacgatcac ggcagcattg
    43861 tctgggacga atttattggt atgtggatca cgctcatggc gctgccgacc aatgactggc
    43921 agtgggttgc cgccgggttt gtgattttcc gtattctgga tatgtggaaa ccgtggccga
    43981 tccgctggtt tgatcgcaat gtgcatggcg gcatggggat catgatagat gatattgtcg
    44041 ccggggtgat ctccgctggc atcctgtact ttattggtca tcactggccg ctgggcattc
    44101 tgtcgtagtt gtgcaccgat gcctgatgtg acgcttgttg cgtctcatca ggcctggact
    44161 cttatttaaa tcctactacc ggatgcggtt tatacggcgt ttccagttcg gcaatctgtt
    44221 ccggcttcaa agtgatatcc accgcgttca atagctcatc aagctgttct tcccgcgatg
    44281 taccgataat cggtgcggca atgcccggtt tactcaacaa ccaagccagc gcaacttgtg
    44341 ctcgtgttgc accgagttct tcactgacgc ccgttaaccg ctctgcgatc tgcgcgtcat
    44401 tttcatcgct ttctttatag agatttttcc ccacctcatc agacaccagt cgtgcggtag
    44461 tttctcccca cggacgcgtc agtcgccccc gcgccagcgg gctccacgga atcaccgcca
    44521 cgccctcctg ataaaacagt ggcagcatct cgcgctcttc ttcgcgataa atcagattgt
    44581 agtgatcctg catactgaca aactgcgccc agccgtgctg tttttggagt tccagtgcct
    44641 gagcaaactg cgaagcgtgc attgatgacg cgccgatata acgcgctttc ccggctttta
    44701 ccacgtcgtt cagggcttcc agcgtctctt cgatcggcgt gttgtaatcc cagcgatgaa
    44761 tttgcaggat atcgacataa tccatgccga gacgtcgcag gctgtcgtcg atagagcgca
    44821 aaatttgtgc acgggataat ccttccggta aatcaccaac gcgatggaac actttggtgg
    44881 caacgaccac gtcttcacga cgggcgaaat cccgcagtgc gcgaccaacg atctcttcgc
    44941 tgctaccatc ggaatagcta ttggcggtat caaagaaatt tatgccgcct tccagtgcgc
    45001 gtttaattat gggacggctg ctctcttccg gcagtgtcca tgcgtgatta ccacgatctg
    45061 gctcgccaaa ggtcatacag ccgaggcaaa gtcgggaaac gcgaaggtcg gtttttccta
    45121 aggggttgta ttgcatgctg ccactcctgc catgaataat ttcttaagca tagcaggagt
    45181 ggagtaggga ttatgccagc caggccttga ttttggcttc cataccggcg gcatcgaggc
    45241 cgagttcggc gcgcatttct tcctgcgttc cttgcggaat aaagaagtca ggcaggccaa
    45301 tgttcagcac ggggactggt ttacgatggg ccattagcac ttcgttcact ccgctgcctg
    45361 caccgcccat aatggcgttt tcttctacgg taaccagtgc ttcatgactg gcggccattt
    45421 ccagaattaa cgcttcatca agcggtttca caaaacgcat atcgaccagc gtggcgttca
    45481 gcgattcggc gactttcgcc gcttctggca tcagcgtacc aaagttaagg atcgccagtt
    45541 tctcgccacg acgcttcaca atgcctttgc caattggtag tttttccagc ggcgtcagtt
    45601 ccacgccgac cgcgttgcca cgcgggtagc gcaccgctga cgggccatcg ttatagtgat
    45661 agccggtata gagcatctgg cgacattcgt tttcatcgct cggggtcata atgaccattt
    45721 ccggtatgca gcgcaggtaa gagagatcaa aagcaccctg atgggtttga ccgtcagcac
    45781 caacaatgcc cgcgcggtcg atggcgaaca ggaccggaag cttttgaatt gccacgtcat
    45841 gcagcacctg atcataggcg cgttgcagga aagtggagta gatcgcgaca atgggtttgt
    45901 acccaccaat cgccagaccg gcggcaaagg tcactgcgtg ttgctcggca attgccacgt
    45961 cgaagtagcg atccgggaat ttacgagaaa actcgaccat gccggaacct tcacgcatcg
    46021 ccggagtaat cgccatcagc ttgttatctt tcgccgccgt ttcgcacaac cagtcgccaa
    46081 agatttttga atagctcggt aaaccgccgc tacttttcgg caaacaaccg ctggagggat
    46141 caaatttagg cacggcgtgg aaagtgattg ggtctttttc tgccggttca taaccacgac
    46201 cttttttggt catgatatgc aggaactgcg ggcctttcag gtcacgcatg ttcttcagcg
    46261 tggtgataag ccccagcaca tcgtgaccgt caaccgggcc gatgtagtta aagcccagct
    46321 cttcaaacaa cgtgccaggg actaccatgc ctttaatatg ttcttcggta cgtttgagca
    46381 gctctttaat gggtggcacg ccagagaaaa cttttttccc gccttcgcgc agtgaagagt
    46441 aaagcttacc ggaaagcagc tgcgccagat ggttgttgag cgcgccgaca ttttcggaaa
    46501 tcgacatttc gttgtcgttg aggaccacca gcatatcagg acggatatcg cccgcgtgat
    46561 tcatcgcttc aaacgccatg cctgcggtaa tcgcgccatc gccgattaca cagacggtac
    46621 ggcgattttt gccttctttc tcggcagcaa ccgcaatacc aattccggca ctgatggagg
    46681 ttgatgaatg cccgacgctt aatacgtcat attcgctttc gccgcgccac gggaacgggt
    46741 gcaggccgcc tttctgacgg atggtgccga ttttgtcgcg gcgtccggtc aaaattttat
    46801 gcggataagc ctgatgcccc acatcccaaa tcaattggtc aaacggggtg ttgtagacat
    46861 agtgcagcgc cacggtcagt tcgaccgtgc ccagcccgga ggcgaagtgc ccgctggaac
    46921 ggctcacgct gtcgagtaaa tagcggcgca gttcgtcgca gagtttcggt aaactctctt
    46981 tcggcaacag tcgtaactcc tgggtggagt cgaccagtgc cagggtcggg tatttggcaa
    47041 tatcaaaact catcaggggc ctattaatac ttattgttta tttattacgc tggatgatgt
    47101 agtccgctag cgcttccagt gccgaggtat cgggtgactg ttcagccagt tgtttcagcg
    47161 actgacgggc atcgtcgatc agatcccggg ctttcttccg ggcttgctca agacccagaa
    47221 gtgcagggta ggtactttta ccaagttgct ggtcggcacc ctggcgtttt cccaacgttg
    47281 cagtatctcc taccacatcc aggatgtcat cctgaacctg gaaggcaagg ccgatgctct
    47341 ctgcgtactt gtcgagtact ggcagagcac gacgcccttt atctccggcg cttaatgcac
    47401 caagacgaac ggcggcgcga atcaatgcgc cggttttatg acgatgaata cgctcaagcg
    47461 cgtccagagg tacgtgtttg ccttccgcgt ctaaatctaa tgcctgacca ccgcacattc
    47521 cggcaatacc gctggcgctc gccagttcag aaatcatcga aattctgtcg cgatccgaca
    47581 cttccggcat atcagcatcg cttaaaatcg agaacgccag cgtttgtaaa gcgtcgccag
    47641 cgagaatcgc gtttgcttcg ccaaacttca catggcaggt cggcaaaccg cgacgcagat
    47701 cgtcatcatc catcgccggt aaatcatcat gaattaatga gtaagcgtgg atacactcta
    47761 cggcggcagc gggtgcgtcc agcgtgtttg tgctaacgcc aaacatatga ccggtggcat
    47821 aaaccaggaa gggtcgcaga cgcttaccac ctaataatgc accatactgc atggtttcga
    47881 ccacgggagt gttctgaaag ggcagtgggg cgataaaacg gctcagcgcc tggttggcct
    47941 gcttaacgca ggcttcgagt tgctgcggaa agtccattac tcattgtccg gtgtaaaagg
    48001 ggttagagag gcgtcttcat tgtcagacag cagaatttgt acgcgctgtt cggcttgttg
    48061 taatttggcc tgcccctgac gtgccagctg cacgccgcgt tcgaactcgt tcagcgcctc
    48121 ttccagcggc aggtcgccac tttccagacg ggttacaatc tgttccagct cgctcagcgc
    48181 cttttcaaag ctggcgggag cctcattttt cttcggcata atgaatgtct gactctcaat
    48241 atttttcgcc ccgtcatggt aacggactca gggcaaatag caaataacgc gcaatggtaa
    48301 ggtgatgtgc gcagcaaagc gatgttagtg gtatacttcc gcgcctggat gcagccgcag
    48361 gtgtgggctg ctgtattttt ccctatacaa gtcgcttaag gcttgccaac gaaccattgc
    48421 cgccatgaag tttatcatta aattgttccc ggaaatcacc atcaaaagcc aatctgtgcg
    48481 cttgcgcttt ataaaaatcc ttaccgggaa cattcgtaac gttttaaagc actatgatga
    48541 gacgctcgct gtcgtccgcc actgggataa catcgaagtt cgtgcaaaag atgaaaacca
    48601 gcgtctggct attcgcgacg ccctgacccg tattccgggt atccaccata ttctcgaagt
    48661 cgaagacgtg ccgtttaccg acatgcacga tatttttgag aaagcgttgg ttcagtatcg
    48721 cgatcagctg gaaggcaaaa ccttctgcgt acgcgtgaag cgccgtggca aacatgattt
    48781 tagctcgatt gatgtggaac gttacgtcgg cggcggttta aatcagcata ttgagtccgc
    48841 gcgcgtgaag ctgaccaatc cggaagtgac tgtccatctg gaagtggaag acgatcgtct
    48901 cctgctgatt aaaggccgct acgaaggtat tggcggtttc ccgatcggca cccaggaaga
    48961 tgtgctgtcg ctcatttccg gtggtttcga ctccggtgtt tccagttata tgttgatgcg
    49021 tcgcggctgc cgcgtgcatt actgtttctt taaccttggc ggcgcggcgc atgaaattgg
    49081 cgtgcgtcag gtggcgcatt atctgtggaa ccgttttggc agctcccacc gcgtgcgttt
    49141 tgtcgctatt aatttcgaac cggtcgtcgg ggaaattctc gagaaaatcg acgacggtca
    49201 gatgggcgtt atcctcaaac gtatgatggt gcgtgccgcg tctaaagtgg ctgaacgtta
    49261 cggcgtacag gcgctggtca ccggcgaagc gctcggccag gtgtccagtc agacgctgac
    49321 caacctgcgc ctgattgata acgtctccga tacgctgatc ctgcgtccgc tgatttctta
    49381 cgacaaagag cacatcatca acctggctcg ccagattggc accgaagact ttgctcgcac
    49441 gatgccggaa tattgcggtg ttatctccaa aagcccgacg gtgaaagcgg ttaagtcgaa
    49501 gattgaagcg gaagaagaga aattcgactt cagcattctc gataaagtgg ttgaagaagc
    49561 gaataacgtt gatatccgcg aaatcgccct gcagaccgag caggaagtgg tggaagtgga
    49621 aaccgtcaat ggcttcggcc cgaacgacgt gatcctcgat atccgttcta tcgatgaaca
    49681 ggaagataag ccactgaaag tcgaagggat tgatgtagtt tctctgccgt tctataaact
    49741 gagcaccaag tttggcgatc tcgaccagaa cagaacctgg ctactgtggt gtgagcgcgg
    49801 ggtgatgagc cgtctgcagg cgctctatct gcgcgagcag ggctttaaca atgtgaaggt
    49861 atatcgcccg taatttgtgg ttgtaacgtc gcatctggtc agatgcgacg cttaccgcat
    49921 ccgacactac tcgtaataat tataaatccc tgccgccatc accagttgtg atgccacttc
    49981 atgggctttc tcgcgcccaa cctgcaggtc gataattttc agaccaaagt cgatagctgt
    50041 ccccggcccc tggctggtca gcaattttac ccgtgcatcc cagacgacgc gcttgtcctg
    50101 ccattgttca gcgggaattt tgtctttcag cgtcgggaag ccggtcatat taccaatcgg
    50161 gaagatatcg tgcggcacca gcacggtggc tggcgcggcg caaatagccg cgacgatacg
    50221 cccggaacgg tggaactgtt taacggtttc aaccagcaga gtgctatcgc gaaaacactc
    50281 tgcgccttta atgccaccag gcagtacgat cacgtcatat tcgccatcag ccacctcgac
    50341 cagcggcgca tccgccagca gcttcacgcc gcgcgagcag gtaattgcca ggttgccatc
    50401 gctggctacg ctggcagtgg tgactttgat accgccgcga accaagaggt cgatcgtggt
    50461 gacggcttca gtctcttcac taccaggggc gaggcaaacc agtgccgatg cgctcatatt
    50521 cactctcctt tctttttacc atttcaaaca ggcgggtgtt ttccggtacg gcaatcccat
    50581 gcgcgcgggc gcggcgtaag agaaaaccat tgatatagtc gatttcggtg tggcgcagcg
    50641 cgcggatatc ctgcaacatc gacgagatat tttccgctgt ggcatcaatc acctgcatca
    50701 cgtaatcacg caaatcttcc gctgaagtat gatgcccttc gcgttcgatc actgccgcga
    50761 cttcttcgca tatttgcata atttcttgcg gatgatgacg taattcaccg ttcgggcaat
    50821 tccagatggc ggtcagtgga ttaatcacgc agttgactgc cagcttgcgc cacagctcgg
    50881 cgcgaatatt gttatgccag gcaacgtcag gcaacacggt ttgtaaaata tccgccagat
    50941 aactgtaatc gccatcctgt tgccgtgccg gaccaatatg cgtgataccg tttgccacat
    51001 gaataatgac attgccgtcg cggcgggcgg catgggtggt ggtgcccatc agtaatggct
    51061 gctgaatatt ttgcaactct tcgatggtgc ccatgccgtt gtgaattaac agtattggcg
    51121 tggttacagg cagtgtggac gcgaggcttt tgacggcatc ggaaacctgc catgctttca
    51181 gcgtcaccag gagcagatcg ctggtggcga gaaaatcggg atcgttggcg gtcagcgatt
    51241 cgttaaatat cgaaccatct gtctcaacca gattcgcact acaataaggt tgcggtacgc
    51301 gcagccagcc ctgaacttca tgaccctgtt tgcaaagtgc tgtaagccat aattgcccta
    51361 aggcaccgca tcccaatacg gtaattttca ttgttcctcc tcacccgcaa ccactccggg
    51421 tgttcaataa ggctatccct taattgtgca tgctgttgcg actatgcaca attaagggat
    51481 acgtcctggt gcaggactgt cggttattta actttgcggg tattatgctt cgcatcaaaa
    51541 atgaagggag aggaaaagat gccatctttc gatattgtct ctgaagttga tcttcaggaa
    51601 gcacgtaacg cggtcgataa cgcgagccgc gaagtggagt cccgttttga cttccgtaac
    51661 gttgaagcct catttgagct gaacgacgcc agcaaaacca tcaaagtgtt gagcgagtcc
    51721 gatttccagg tcaatcagtt gctggatatt ctgcgtgcca agctgctgaa gcgcggcatt
    51781 gaaggcagtt cactggatgt accggaaaat atcgttcata gcggtaaaac ctggtttgtg
    51841 gaagcgaaac tgaagcaggg cattgagagc gcgacccaga aaaaaatcgt caagatgatc
    51901 aaagacagca aactgaaagt gcaggcgcaa attcagggcg atgagatccg cgtgactggc
    51961 aaatctcgtg atgatttgca ggctgtcatg gcgatggtgc gcggtggcga tctgggtcag
    52021 ccgttccagt tcaaaaactt ccgcgattaa tcgcgacaac ctgcgctttg ttcatgtcag
    52081 atgcggcatg aacgcctggt tcggcctaca aaggcttgta aatcaggagc ttagtaggcc
    52141 tgatgagcgt agcgcagcag gcaatttcgc ctcgctttta tgcctggcga attgcctgtt
    52201 caacatcaaa gcgattcgtc actttgctgt cgattttcac ataagctgaa tgttcttctt
    52261 ctgcaatcaa cacttctttg atgccttcag tttctagcaa acgcactttt aacgcctcgt
    52321 ttgcggcaat gttcgccggg atttcaatgc gcaaactgct gacatacgcc ggttctttca
    52381 tggtactggc gactgccagc cacactgcgg ccagcattgc gccagcgaga aatacgccct
    52441 gaccgtcaaa catgccgtca atccagccgc ccagtgaacc gccaatcgcc acgccaagaa
    52501 actggctggt ggagtaaaca cccatcgctg tacctttgta acctgctggc gactctttac
    52561 tgataagtga aggcagaagg gcttccatca aattaaacgc tacaaagaaa agctgcacgc
    52621 cgaccaccag ttgccagaac tgcgtttgcg cgttccacaa cacaatttcc gcaaccacga
    52681 tcaatccgac gcagaagaca aagacttgct tcattttgcg cttaacttca gcgtagataa
    52741 tgaaaggcac gaccgagcca aaggcgatta gcattgtcgc cagatagacc ttccagtgtt
    52801 cagccgccgg gaaccctgca tcagccagtt gtccgggcag ggcaacaaac gtcgacatca
    52861 gcaaaatatg cagacacata atgccaaagt tgagtttcag cagccgcggt tccgccagca
    52921 ctttactgaa actgcctttc accattccgg actcacgatt aagtacgtga gtgctactgt
    52981 tgggcacaac ccaaatggtc aacgcaatgc cggtcgttgc cagaatagcg atcatccaga
    53041 acagcgcgtg cagcccaagt ttgtgagtga tgatcgggcc aagcaccatc gcaatggcaa
    53101 aggtaatgcc aaagctcacg ccgataaacg ccattgcttt ggtgcggttt tgttcgcgcg
    53161 tgagatcgga aagcagcgcc ataacggcag cggcaatcgc accggagcct tgtagcgccc
    53221 ggcctagaat aattccccag atggagtcag agagcgcagc gataacgcta ccggcggcaa
    53281 acaccgccag cccaccgaca attaatggtt tgcgaccaat acggtcggaa agcaggccaa
    53341 acggaatctg aaaaacggcc tgagtcagac cataaatacc aatggcaata ccgattaatg
    53401 cttcgctggc accttgcaga gccatgccat acgtggtcag aaccggcaga accataaaca
    53461 tgcccagcat gcgcaacgag aatacggtcc ctaaacccca ggtcgcgcgc ctctcacctg
    53521 gcgtcatttt ataatcgttc attaccacct ctgttttaaa ttcgcgacta gtgtaaagcg
    53581 gcaaacgaat ggggtaaaca tgcggatttt ttagtaaata tttcgagagg gatatgtttc
    53641 taatgctaag aaaaaaggtg ccgtagcacc tttttaatag agaggttttg ttaccacaca
    53701 gcagccagca gcgtatgcga gtccggtacc ataaaatcaa cggacatcat caccgagagg
    53761 gcagtgatgg cgatgataga gaagccgaac agcttgcgcg cccagattct gtcatcagca
    53821 actttataac cgcgcagagc catacctaac caccagacgc taaccgccgc ggcgaccacc
    53881 agatatttat atccagcgta accgccaaga gagagcatca gcgtggcaac ggcaaaggcg
    53941 atgatataca gcgtgatgtg attcttcgcc accgaaatgc cttttaccac tggcaatacc
    54001 ggaatgtttg ccgcctggta atccttaaag cggaaaatgg cgatggcata ggagtgaggc
    54061 atctgccaca ggctgaagat agccagcagg atcgctgcgc cgctatcgaa ctcgccggtt
    54121 actgcacagt agccaatcac cggcggcgca gcgccggaga gcgaaccaat caatgtgccg
    54181 tagactgagt ggcgtttcat gtacaggcta tagacgccga cataaaccac aaagcccatc
    54241 acccccagcc agcaggccag cggattcgcg ccaaaccaca gcagcataaa gccagcaata
    54301 cccagcaagg tggcgtacac cagcgagaca gcaggagaga tcaggccttt aaccagcacc
    54361 cgattcttcg tcctttccat ctttctgtcg atatccctgt cgatgtagtt gttaaacaca
    54421 caacccgacg ccacaaccag tgacacccca accagcgtgt agataaacag gggataatca
    54481 atgctgccct ttgaggccag caggaatccc ccaatcaccg agatcaggtt gccaaagatg
    54541 atgcctggtt tcgttacttg caggtattgc ttaaacatca taaccgccgc tcttagtgca
    54601 tcatcatgtt gtagttgagg ttccacataa tccagatgga gcctacaacc aggatagcga
    54661 tgattagcac ggtgaagaca aacgccgtca tgttccagcc ttcatctgat ttggtattca
    54721 tgtgcaggaa gcacaccaga tgcaccagaa cctgtaccac tgccattgcc aggattgttc
    54781 ccagaattac ggccggagag gcagcccctg tcatcaccat ccagaacgga atcaccgtca
    54841 gaatgatcga caggataaag cctgtcatgt aggtttttac gctgccatgg gacgcgccgc
    54901 tgtgatcggt agaatgactc attacatcgc ccccatcaga taaacaacag tgaacacaca
    54961 gatccaaacc acatccagga agtgccagaa caggctcagg cacatgatgc gggtacggtt
    55021 agtgctggtc aggccgcgac gagcgatttg taccatcagc accgccatcc agataagacc
    55081 ggaagtgacg tgcagaccgt gcgtgccgac cagcgcaaag aacgctgaca ggaagccgct
    55141 gcgatccgga cccatgccgt taacaatcag gtgatggaat tcgtagattt ccatcccgat
    55201 aaatccggca ccaaacaaac aggtcaacgc cagccaggag ataacctggc ttttgttgtt
    55261 tttgtacatg gcgatagccg ccatgccgta ggtgatggag ctgaacaaca gcaagaaagt
    55321 ttcaaccaga acgaacggca gttcgaaaat gtccttacct gtcgggccgc ctgcggtgcc
    55381 gttcaccaga acggcatagg tagcaaacaa gattgagaac agaatgcagt cgctcatcag
    55441 gtagatccaa aatccgaaga ttttggttcc gcctgcatcg tggtgcccgt gttcgtgcgc
    55501 gtgggcagtc gcgtgcgtca aagtatcagt tgccattttt cagccctgcc ttagtaatct
    55561 catcgaaatg ctggttttcc agtttttcga tttctgccac cggcacgtag taatccacgt
    55621 cctcgtcgaa gcttttcacg atccaggtga tgatcatgcc tgcgaagcca acaatcgcca
    55681 gccaccagat atgccagatc atggcgaaac cgaagatggt ggagaaagct gcaatgacga
    55741 tacctgcacc gctgtttttc ggcatatgaa tttcttcata gtggtcaggc tttttatacg
    55801 cttcgccttt ctctttcatt tcccagaatg catcacgctc gtgaacgtgc ggcacaacgg
    55861 caaagttata gaacggaggc ggggaagagt ttgcccactc cagcgtacgg ccaccccacg
    55921 ggtcgccagt caggtcacgg ttctggtcgc ggtcgcgaat agaaacgtac atctgaataa
    55981 cgaggcagag aatacccagc gcaatcagta ctgcaccgct agctgcaatc atcagcatgg
    56041 tgtggaactg cgggtcaatc tgctggctca aacgacgggt catgcccatg aagcccagtg
    56101 catacagcgg cataaaggca acgaagaagc cgatgatcca gaaccagaac gcgcgtttac
    56161 cccaggtttc attcagtttg aaaccgaacg ctttaggcca ccagtaggtc atccctgcga
    56221 agcagccgaa gaccacgccg ccgatgataa cgttatggaa gtgcgcaatc aggaacaggc
    56281 tgttatgcag aacgaagtcc gcgcccggta ctgccagcag cacgccagtc atcccgccca
    56341 ccgagaaagt gacgataaaa ccgatggtcc acagcatcgc agaatggaac acgatacggc
    56401 cctgatacat ggtgaacagc cagttgaaga tcttcacccc ggtcgggatg gcgataatca
    56461 ttgtggtgat accaaagaag gcgtttacgt tcgcgcccgc acccatcgta aagaagtggt
    56521 gcagccaaac gatgaacgac agcacggtga tacagacggt tgcccatacc agcgaggtat
    56581 aaccaaacag acgtttacgc gagaaggttg ccgcaatttc ggagaacaca ccgaaaacag
    56641 gcaggatcag gatgtaaact tccgggtggc cccaggccca aatcaggttg atgtacatca
    56701 tcatgttgcc acccatatcg ttggtaaaga aatgggtgcc cagatagcga tccagggtca
    56761 acaacgcgac ggtaaccgtc agaattggga aggaagcaat aatcagtacg ttcgcgcaca
    56821 gtgatgccca ggtaaatact ggcatcttga acatggtcat gcccggtgcg cgcatcttca
    56881 gaatggtaac gaagaagttg ataccggtaa gcgtcgtacc tataccggat agctggagac
    56941 tccatatcca gtaatcaaca ccgactcccg gactgtactc tattcccgat agcggtggat
    57001 aggccagcca gccggtctgc gcaaattcgc ccacgccgag agaaacgtta accagaatca
    57061 caccaacaac agtaaaccag aagcttaagt tgttgaggaa cgggaacgca acgtcacgcg
    57121 cgccgatctg cagcggaacc accaggttca tcagaccgat aacgaaaggc atcgccacga
    57181 agaagatcat aatcacgccg tgcgcggtga agatctgatc gtagtggtga ggtggcagga
    57241 agcccgcttc gcccgccgag gcaagagcct gctggctacg catcataatg gcgtcagcaa
    57301 aaccacgcag caacatcaca atcgccacga tgatatacat gataccgagg cgtttatggt
    57361 cgacggaggt cagccactct ttccacaggt aggtccactt accgaagtaa gtgatcaggc
    57421 caacgagcgc cagacctccc aaaataatgc cagcgatcgt aaccatgacg ataggttcat
    57481 ggaacgggac tgcatcaagt gataattttc cgaacatctt tattcttcct caaccccttt
    57541 aatgggcgga ttccgcgtgg ctcatgtcca tgccttccat accttcgtgt gcgctgtgct
    57601 caccttctgg ctgggtcatg tccatgctct taccgtgagc cataaacttg ttaatcacat
    57661 cagcaaacaa gtctggtttc acgttggaga aatattccac ctggttgtat tcgctaggcg
    57721 cggccagttt ttcgaacgca gccatgtcag acatggtgtt cggcgactgc ttcgcttttg
    57781 cgacccactg gtcgaattcg gcgcgatccg gtgttgcaat agctttgaac ttcatgcctg
    57841 agaagcccgg gccgctgtag ctggcggaga taccgtcata agtaccgggt tcgttggcga
    57901 tcagatgcag gcgagtctgc ataccagcca tggcataaat ctggctaccc agacgcggaa
    57961 tgaagaagga gttcatcacg gagttggagg tcactttgaa gtacaccgga gtgttcgccg
    58021 ggaaagcgat ttcattcacg gtagcaatgc cctgttccgg gtagatgaag aaccatttcc
    58081 agtccatgga aaccacttcg atggtaatgg gcttctcgtc gtgtgccagc ggcttgctag
    58141 gctcaagagc gtgagtggtt ttccaggtca gtaccgcaag gaagatgatg attaagatag
    58201 gtaccgtcca gaccacagct tccactttat tggagtgtga ccagttcggg ctgtacttag
    58261 catctttatt gctcgcacga tacttccagg cgaaaccaac agccatcaag attgcgggaa
    58321 taacgacaat caacatcagg ccaaatgccg tcagtatcag tgaacgttgc tccagaccaa
    58381 tctgtccttt gggatctaac agcgcagaat tacagccact gagcaataca gtgcctgcaa
    58441 ataatgacaa ccatcccaaa cttttattgt atttcctgag tctcatttaa cgacctcaat
    58501 tccacgggat ctggtggcgt ttaaagtgtg tgggcatttt atgggaaggt tacattactg
    58561 taaacatgat taaattcctg ttacttggat ttgactgtca ggtcacatat gttgcaaaac
    58621 atatcaagtt gattttaaga agctgttgca aaagggcgtt ataacgaaag gggagtgcag
    58681 aaggagtttg gatgggcaat tggtataacc aatctggaat aaaataattg tttaacaaat
    58741 aattatcatt atggtgacaa ttgggtgggg ggaaaataaa gactcgttag ctgaatcgtg
    58801 taagaaaaaa tagaattcat aaattgcgtc aataatttcc aaacgctaag ccgcacaaaa
    58861 gaacaaatat tattaagcga tactgatgtt tatttagccg taataattac ggcgagtgat
    58921 tactacagct aaataatatt tacagattac gtcagatgcg tttttcgtag agccagataa
    58981 tccagcaaac caccaagcac gacgccagaa agggcgacta aaaccccgac ttccagcaga
    59041 gcaggcagga aagagaagtg cgtcaaatcc agcgcgtcca tcgtcaacag cagtaaccac
    59101 acggccaaca ggctgacgcc cgccgccagt gtccacatgg caaaggcata acctgccgga
    59161 tattcggtac gggagataaa gttgtcattt actcgtgtat attcaagcgt ctggcggcaa
    59221 accagcagca aaataagccc cggtacggca gcggcgacgg agaatagata gaatgtcgac
    59281 cagccgtgtg cttcaacaaa ccaacccgcc acggggccga cataaactcg tcctacagcg
    59341 gaaagcgctg agagcagggc aaattgagta gcggaaaatg acttattaca cagcgtcatt
    59401 aacagcgcga caaaggctga tgtgcccatc ccgccacaga ggttttcgaa aaagacggct
    59461 gcgcccatgc tgtagagatg cttatcagta atcgacagca gccagtaacc agcgttagac
    59521 gcaccttgta aaatgccgaa aatcagcagc gcccggaaca gcgacaggcg ctgcatcaaa
    59581 atcccaccgt acaatgcgcc cacaatggtc gccagtaagc caagcgtttt gttaaccacg
    59641 cctacttcac ccgcatcaaa cccgacgccg cgaatcaaaa acgtggttgt caggctcatg
    59701 gcgaatgcgt cgcccagctt atacagcacg ataagaagca aaataagcca ggcattattg
    59761 cgaccaaaga aatctcgcag aggtgcaaca accgcttgtt ccagcgtttt tggcacagga
    59821 atggtgtcgg tcggttctgg tgcaagcaac gtcgcgataa tacaagggat caacagcgca
    59881 gccatcaacc agtacatgcc ctgccagccc agccatttat ctgccagcca cagggctaag
    59941 ccgccggaaa ccagcatccc taaacggtaa cccagcacgc tgattgccgc gcccgcacca
    60001 cgttcttctg ccgggagcac atcggttttc cacgcatcga agacaatatc ctgggaggcc
    60061 gagcaaaaag cgatcaccac cgccagtgcc gccatccagc ggagttgggt gccaggttcg
    60121 agaaaaccca tcgccgcaat ggcgactaat aacaggattt gcgtggcgag cagccaaccg
    60181 cgccgccgcc caaaaaatgg gggcgtgtag cggtccatca gcggtgacca gaggaattta
    60241 aaaacgtaag cctggcctac cagagagaag aaaccaatgg ttttgagatc aatattctcg
    60301 accgtcatcc aggcctgtaa ggtaccggat gtcagggcga gcggtagccc ggaagcaaaa
    60361 cccaggatca gcaatatggc tgaacgcggc tgttgaaaaa tacgtaaata ttgactggac
    60421 atgggcgtct acaggcccgg tttgcaccgg gccagagggc agaaattaac gcgcgttctg
    60481 cttgatgaat tcgtgaatgc tggtgtcctg agacatatca gcgatggtat cggtcagcac
    60541 actgttaacc gcatcggcga tatttttgtt ggaggcctgg aacgcacctt caacgttgta
    60601 gctggcacga tagtttttgg ttattttgtt gccattctgc gcggtagcga tgatggcgat
    60661 atccgctttg gtagcgatgt tgtagcgcac gttgccctgg gacacgtcag catacagttg
    60721 gctaacgatg atttgcagat taaccgggcc attcggacca accatgtaac cacgcgcggt
    60781 catctgtttt tccagcactt cttgcagcag gaaacgcaga tcgcgggagg cggccagggt
    60841 aacgatttga ttatcgcggg tgacttttgc cagcgcctga tcggtacgct gatcggcacc
    60901 attaatgctt acggtgacgc ccatcaggct tggatcctgc tgtggcagtg taatcgtcgg
    60961 ggaaacttca atagttgttg gcggttttgc gcatcctgca agcataaaca gagcaactaa
    61021 cgggaagagg atttttttga acatgttcgg gctctcagag actcttaagc gtgtttggta
    61081 aaaattcccg ccatcataac attgccaacg gcgaggggaa gtgggtaagg catgtaaatt
    61141 catcatgttg acgaaataat cacccctggt aaaagaaacg ctgatgcgag gcctgtgttt
    61201 caatctttaa atcagtaaac ttcatacgct tgacggaaaa accaggacga aacctaaata
    61261 tttgttgtta agctgcaatg gaaacggtaa aagcggctag tatttaaagg gatggatgac
    61321 atctcagcgt tgtcggagga gatatttcat gatgatacgt gagcggatag aagaaaaatt
    61381 aagggcggcg ttccaacccg tattcctcga agtagtggat gaaagctatc gtcacaatgt
    61441 cccagccggc tctgaaagcc attttaaagt tgtgctggtc agcgatcgtt ttacgggtga
    61501 acgttttctg aatcgtcatc gaatgattta cagtacttta gcggaggaac tctctactac
    61561 cgttcatgcg ctggctctgc atacttacac tattaaggag tgggaagggt tgcaggacac
    61621 cgtctttgcc tctcctccct gtcgtggagc aggaagcatc gcgtaaaaac gcatttgcaa
    61681 ctgtcggcgc tttttcagta tgttgctaaa gattttatga aaaacggcct gcgggccgtt
    61741 ttgttttgtc tggattttgc gctttttgcc cagcattcag acgaaaattg cccgggaatt
    61801 gtgaaaaaat acgcgacagc gcgcaataac cgttctcgac tcataaaagt gatgccgcta
    61861 taatgccgcg tcctatttga atgctttcgg gatgattctg gtaacaggga atgtgattga
    61921 ttataagaac atcccggttc cgcgaagcca acaacctgtg cttgcggggt aagagttgac
    61981 cgagcactgt gattttttga ggtaacaaga tgcaagtttc agttgaaacc actcaaggcc
    62041 ttggccgccg tgtaacgatt actatcgctg ctgacagcat cgagaccgct gttaaaagcg
    62101 agctggtcaa cgttgcgaaa aaagtacgta ttgacggctt ccgcaaaggc aaagtgccaa
    62161 tgaatatcgt tgctcagcgt tatggcgcgt ctgtacgcca ggacgttctg ggtgacctga
    62221 tgagccgtaa cttcattgac gccatcatta aagaaaaaat caatccggct ggcgcaccga
    62281 cttatgttcc gggcgaatac aagctgggtg aagacttcac ttactctgta gagtttgaag
    62341 tttatccgga agttgaactg cagggtctgg aagcgatcga agttgaaaaa ccgatcgttg
    62401 aagtgaccga cgctgacgtt gacggcatgc tggatactct gcgtaaacag caggcgacct
    62461 ggaaagaaaa agacagcgct gttgaagcag aagaccgcgt aaccatcgac ttcaccggtt
    62521 ctgtagacag cgaagagttc gaaggcggta aagcgtctga tttcgtactg gcgatgggcc
    62581 agggtcgtat gatcccgggc tttgaagacg gtatcaaagg ccacaaagct ggcgaagagt
    62641 tcaccatcga cgtgaccttc ccggaagaat accacgcaga aaacctgaaa ggtaaagcag
    62701 cgaaattcgc tatcaacctg aagaaagttg aagagcgtga actgccggaa ctgactgcag
    62761 aattcatcaa acgtttcggc gttgaagatg gttccgtaga aggtctgcgc gctgaagtgc
    62821 gtaaaaacat ggagcgcgag ctgaagagcg ccatccgtaa ccgcgttaag tctcaggcga
    62881 tcgaaggtct ggtaaaagct aacgacatcg acgtaccggc tgcgctgatc gacagcgaaa
    62941 tcgacgttct gcgtcgccag gctgcacagc gtttcggtgg caacgaaaaa caagctctgg
    63001 aactgccgcg cgaactgttc gaagaacagg ctaaacgccg cgtagttgtt ggcctgctgc
    63061 tgggcgaagt tatccgcacc aacgagctga aagctgacga agagcgcgtg aaaggcctga
    63121 tcgaagagat ggcttctgcg tacgaagatc cgaaagaagt tatcgagttc tacagcaaaa
    63181 acaaagaact gatggacaac atgcgcaatg ttgctctgga agaacaggct gttgaagctg
    63241 tactggcgaa agcgaaagtg actgaaaaag aaaccacttt caacgagctg atgaaccagc
    63301 aggcgtaatt tacgcagcat aacgcgctaa attcgcacaa aggcccgtca ccgccaggtg
    63361 gtgggctttt tttgtcatga attttgcatg gaaccgtgcg aaaagcctct ttcggtgtta
    63421 gcgtaacaac aaaagattgt tatgcttgaa atatggtgat gccgtaccca taacacaggg
    63481 actagctgat aatccgtcca taaggttaca atcggtacag caggtttttt caattttatc
    63541 caggagacgg aaatgtcata cagcggcgaa cgagataact ttgcacccca tatggcgctg
    63601 gtgccgatgg tcattgaaca gacctcacgc ggtgagcgct cttttgatat ctattctcgt
    63661 ctacttaagg aacgcgtcat ttttctgact ggccaggttg aagaccacat ggctaacctg
    63721 attgtggcgc agatgctgtt cctggaagcg gaaaacccag aaaaagatat ctatctgtac
    63781 attaactccc caggcggggt gatcactgcc gggatgtcta tctatgacac catgcagttt
    63841 atcaagcctg atgtcagcac catctgtatg ggccaggcgg cctcgatggg cgctttcttg
    63901 ctgaccgcag gggcaaaagg taaacgtttt tgcctgccga attcgcgcgt gatgattcac
    63961 caaccgttgg gcggctacca gggccaggcg accgatatcg aaattcatgc ccgtgaaatt
    64021 ctgaaagtta aagggcgcat gaatgaactt atggcgcttc atacgggtca atcattagaa
    64081 cagattgaac gtgataccga gcgcgatcgc ttcctttccg cccctgaagc ggtggaatac
    64141 ggtctggtcg attcgattct gacccatcgt aattgatgcc agaggcgcaa ctgtgccgct
    64201 atacttatcc agggcggcac aacgctgtaa gcggcttgcg cctgagaatg gcatttgcgt
    64261 cgtcgtgtgc ggcacaaaga acaaagaaga ggttttgacc catgacagat aaacgcaaag
    64321 atggctcagg caaattgctg tattgctctt tttgcggcaa aagccagcat gaagtgcgca
    64381 agctgattgc cggtccatcc gtgtatatct gcgacgaatg tgttgattta tgtaacgaca
    64441 tcattcgcga agagattaaa gaagttgcac cgcatcgtga acgcagtgcg ctaccgacgc
    64501 cgcatgaaat tcgcaaccac ctggacgatt acgttatcgg ccaggaacag gcgaaaaaag
    64561 tgctggcggt cgcggtatac aaccattaca aacgtctgcg caacggcgat accagcaatg
    64621 gtgtcgagtt gggcaaaagt aacattctgc tgatcggtcc gaccggttcc ggtaaaacgc
    64681 tgctggctga aacgctggcg cgcctgctgg atgttccgtt caccatggcc gacgcgacta
    64741 cactgaccga agccggttat gtgggtgaag acgttgaaaa catcattcag aagctgttgc
    64801 agaaatgcga ctacgatgtc cagaaagcac agcgtggtat tgtctacatc gatgaaatcg
    64861 acaagatttc tcgtaagtcg gacaacccgt ctattacccg tgacgtttcc ggtgaaggcg
    64921 tacagcaggc actgttgaaa ctgatcgaag gtactgttgc tgccgttcca ccgcagggcg
    64981 ggcgtaagca tccgcagcag gaatttttgc aggttgatac ctccaagatc ctgtttattt
    65041 gtggcggtgc gtttgccggt ctggataaag tgatttccca ccgtgtagaa accggctccg
    65101 gcattggttt tggcgcgacg gtaaaagcga agtccgacaa agcaagcgaa ggcgagctgc
    65161 tggcgcaggt tgaaccggaa gatctgatca agtttggtct tatccctgag tttattggtc
    65221 gtctgccggt tgtcgcaacg ttgaatgaac tgagcgaaga agctctgatt cagatcctca
    65281 aagagccgaa aaacgccctg accaagcagt atcaggcgct gtttaatctg gaaggcgtgg
    65341 atctggaatt ccgtgacgag gcgctggatg ctatcgctaa gaaagcgatg gcgcgtaaaa
    65401 ccggtgcccg tggcctgcgt tccatcgtag aagccgcact gctcgatacc atgtacgatc
    65461 tgccgtccat ggaagatgtc gaaaaagtgg ttatcgacga gtcggtaatt gatggtcaaa
    65521 gcaaaccgtt gctgatttat ggtaagccgg aagcgcaaca ggcatctggt gaataattaa
    65581 ccattcccat acaattagtt aaccaaaaag gggggatttt atctcccctt taatttttcc
    65641 tctattctcg gcgttgaatg tgggggaaac atccccatat actgacgtac atgttaatag
    65701 atggcgtgaa gcacagtcgt gtcatctgat tacctggcgg aaattaaact aagagagagc
    65761 tctatgaatc ctgagcgttc tgaacgcatt gaaatccccg tattgccgct gcgcgatgtg
    65821 gtggtttatc cgcacatggt cattccctta tttgtcgggc gggaaaaatc tatccgttgt
    65881 ctggaagcgg cgatggacca tgataaaaaa attatgctgg tcgcgcagaa agaagcttca
    65941 acggatgagc cgggtgtaaa cgatcttttc accgtcggga ccgtggcctc tatattgcag
    66001 atgctgaaac tgcctgacgg caccgtcaaa gtgctggtcg aggggttaca gcgcgcgcgt
    66061 atttctgcgc tctctgacaa tggcgaacac ttttctgcga aggcggagta tctggagtcg
    66121 ccgaccattg atgagcggga acaggaagtg ctggtgcgta ctgcaatcag ccagttcgaa
    66181 ggctacatca agctgaacaa aaaaatccca ccagaagtgc tgacgtcgct gaatagcatc
    66241 gacgatccgg cgcgtctggc ggataccatt gctgcacata tgccactgaa actggctgac
    66301 aaacagtccg ttctggagat gtccgacgtt aacgaacgtc tggaatatct gatggcaatg
    66361 atggaatcgg aaatcgatct gctgcaggtt gagaaacgca ttcgcaaccg cgttaaaaag
    66421 cagatggaga aatcccagcg tgagtactat ctgaacgagc aaatgaaagc tattcagaaa
    66481 gaactcggtg aaatggacga cgcgccggac gaaaacgaag ccctgaagcg caaaatcgac
    66541 gcggcgaaga tgccgaaaga ggcaaaagag aaagcggaag cagagttgca gaagctgaaa
    66601 atgatgtctc cgatgtcggc agaagcgacc gtagtgcgtg gttatatcga ctggatggta
    66661 caggtaccgt ggaatgcgcg cagcaaggtc aaaaaagacc tgcgtcaggc gcaggaaatc
    66721 cttgataccg accattatgg tctggagcgc gtgaaagatc gcatccttga gtaccttgcg
    66781 gttcaaagcc gtgtcaacaa aatcaaggga ccgatcctct gcctggtagg gccgccgggg
    66841 gtaggtaaaa cctctcttgg tcagtccatt gccaaagcca ccgggcgtaa atatgtccgt
    66901 atggcgctgg gcggcgtgcg tgatgaagcg gaaatccgtg gtcaccgccg tacttacatc
    66961 ggttctatgc cgggtaaact gatccagaaa atggcgaaag tgggcgtgaa aaacccgctg
    67021 ttcctgctcg atgagatcga caaaatgtct tctgacatgc gaggcgatcc ggcctctgca
    67081 ctgcttgaag tgctggatcc agagcagaac gtagcgttca gcgaccacta cctggaagtg
    67141 gattacgatc tcagcgacgt gatgtttgtc gcgacgtcga actccatgaa cattccggca
    67201 ccgctgctgg atcgtatgga agtgattcgc ctctccggtt ataccgaaga tgaaaaactg
    67261 aacatcgcca aacgtcacct gctgccgaag cagattgaac gtaatgcact gaaaaaaggt
    67321 gagctgaccg tcgacgatag cgccattatc ggcattattc gttactacac ccgtgaggcg
    67381 ggcgtgcgtg gtctggagcg tgaaatctcc aaactgtgcc gcaaagcggt taagcagtta
    67441 ctgctcgata agtcattaaa acatatcgaa attaacggcg ataacctgca tgactacctc
    67501 ggtgttcagc gtttcgacta tggtcgcgct gataacgaaa actgtgtcgg tcaggtaacc
    67561 ggtctggcgt ggacggaagt gggcggtgac ttgctgacca ttgaaaccgc atgtgttccg
    67621 ggtaaaggca aactgaccta taccggttcg ctcggcgaag tgatgcagga gtctattcag
    67681 gcggcgttaa cggtggttcg tgcgcgtgcg gaaaaactgg ggatcaaccc tgatttttac
    67741 gaaaaacgtg acatccacgt ccacgtaccg gaaggtgcga cgccgaaaga tggtccgagt
    67801 gccggtattg ctatgtgcac cgcgctggtt tcttgcctga ccggtaaccc ggttcgtgcc
    67861 gatgtggcaa tgaccggtga gatcactctg cgtggtcagg tactgccgat cggtggtttg
    67921 aaagaaaaac tcctggcagc gcatcgcggc gggattaaaa cagtgctaat tccgttcgaa
    67981 aataaacgcg atctggaaga gattcctgac aacgtaattg ccgatctgga cattcatcct
    68041 gtgaagcgca ttgaggaagt tctgactctg gcgctgcaaa atgaaccgtc tggcatgcag
    68101 gttgtgactg caaaatagtg acctcgcgca aaatgcacta ataaaaacag ggctggcagg
    68161 ctaattcggg cttgccagcc tttttttgtc tcgctaagtt agatggcgga tcgggcttgc
    68221 ccttattaag gggtgttgta aggggatggc tggcctgata taactgctgc gcgttcgtac
    68281 cttgaaggat tcaagtgcga tataaattat aaagaggaag agaagagtga ataaatctca
    68341 attgatcgac aagattgctg caggggctga tatctctaaa gctgcggctg gccgtgcgtt
    68401 agatgctatt attgcttccg taactgaatc tctgaaagaa ggggatgatg tagcactggt
    68461 aggttttggt acttttgccg ttaaagagcg tgctgcccgt actggccgca acccgcagac
    68521 cggtaaagag atcaccatcg ctgctgctaa agtaccgagc ttccgtgcag gtaaagcact
    68581 gaaagacgcg gtaaactaag cgttgtcccc ggtggggatg tgacgaagtt caagggcgca
    68641 tctactgatg tgcctttttt atttgtattc ggtgactttc tgcgtcttgt gggctgacaa
    68701 ttgcccccgt ttcttgtcac aataggcctt tgcgcgcatc gatacgttgc gtgaggtaca
    68761 cagtcatcta cagcggagtg ttgttacacc atgatggaca gcttacgcac ggctgcaaac
    68821 agtctcgtgc tcaagattat tttcggtatc attatcgtgt cgttcatatt gaccggcgtg
    68881 agtggttacc tgattggcgg aggcaataac tacgccgcaa aagtgaatga ccaggaaatc
    68941 agccgtgggc agttcgagaa cgcctttaac agcgagcgta atcgcatgca gcaacagctg
    69001 ggcgatcaat actccgagct ggcagcgaat gaaggctata tgaaaaccct gcgtcaacag
    69061 gtgctgaatc gtctgatcga cgaggcgctg ttggatcagt acgctcgtga gctgaaactg
    69121 ggtatcagtg atgagcaggt taaacaggcg attttcgcga ccccagcctt ccaggttgac
    69181 ggcaaatttg ataacagccg ctataacggt atcctcaacc agatggggat gaccgccgat
    69241 cagtacgccc aggcgctgcg taaccagctc actacccaac agctgattaa cggtgttgcc
    69301 ggtaccgatt ttatgctgaa aggtgaaacc gacgagctgg cggcactggt cgcgcaacaa
    69361 cgcgtggtgc gtgaggcgac tatcgatgtt aacgcgctgg cggcgaagca gcctgtgacc
    69421 gaacaggaga ttgccagcta ctacgaacaa aacaaaaaca atttcatgac gccggaacaa
    69481 ttccgcgtga gttacatcaa gctggatgcc gcaacgatgc agcaaccggt tagcgatgcg
    69541 gatatccaga gctactacga tcagcatcag gatcaattca cccagccgca gcgtacccgc
    69601 tacagcatca tccagaccaa aactgaagat gaagcgaaag cggtacttga tgagctgaat
    69661 aaaggcggtg attttgctgc attagccaaa gaaaaatctg ccgatattat ctctgcccgt
    69721 aacggcggcg atatgggttg gttagaagat gccactatcc ccgacgaact gaaaaatgct
    69781 ggtctgaaag aaaaaggcca actgtctggt gtcatcaaat cttcggtcgg tttcctgatt
    69841 gtacgtctgg acgacattca gccagcgaaa gtgaaatcgt tagacgaagt acgtgacgac
    69901 attgcggcga aagtgaaaca cgaaaaagcc ctcgatgcgt actatgcgct gcagcagaaa
    69961 gtgagcgatg cggcaagcaa cgacaccgag tctctggccg gtgcagagca agctgccggc
    70021 gttaaagcca ctcagacggg ttggttcagc aaagataacc tgccggaaga gttgaacttc
    70081 aagccggttg ccgacgctat ctttaacggc ggtctggtag gtgaaaacgg cgcgccgggc
    70141 atcaactctg acatcatcac cgtagacggc gaccgtgcat tcgtgctgcg catcagcgag
    70201 cacaaaccgg aagcggtgaa accgttggca gatgttcagg aacaagttaa ggcactggtt
    70261 cagcacaaca aagctgaaca acaggcgaaa gtggatgctg agaaactgct ggttgatttg
    70321 aaagccggca aaggtgcgga agctatgcag gctgccggtc tgaaatttgg cgagccgaaa
    70381 accttaagcc gttccggtcg tgacccgatt agccaggcgg cgtttgcact gccactgcca
    70441 gcgaaagaca aaccgagcta cggtatggcg accgatatgc aaggtaatgt ggttctgctg
    70501 gcgctggatg aagtgaaaca aggttcaatg ccggaagatc agaaaaaagc gatggtgcag
    70561 ggtatcaccc agaacaacgc acaaatcgtc tttgaagctc tgatgagtaa cctgcgtaaa
    70621 gaggcgaaaa tcaaaattgg cgatgcgctg gaacagcaat aatcctgaag ccgcctcgca
    70681 aaaaaatgcg ttgcagctgt aacaagaaaa ggtcgctttc gcggcctttt ccatttctga
    70741 acattgccat ttgtttactg ttttcactgc cgttaaggtg attccactgt taacaaacaa
    70801 ggagaaaaca gtatgaaaca cggaattaaa gcactgctca ttaccctgtc cctggcctgt
    70861 gccggaatgt ctcatagcgc gctggcggca gcttctgtgg cgaaaccgac ggcggtagaa
    70921 accaaagcgg aagctcctgc agcacaaagt aaagcagcag taccggcgaa agccagtgac
    70981 gaagaaggca cccgggtcag cattaataat gccagcgcgg aagagctagc ccgcgcgatg
    71041 aatggcgttg gcctgaagaa agcgcaggcg attgtcagtt atcgcgaaga gtacggtccg
    71101 tttaaaacag tggaggatct aaagcaggtg ccggggatgg gcaattcgct ggtggaacgt
    71161 aatctggcgg tattaaccct gtaattaatt tgcatagtgg caattttttg ccagactgaa
    71221 gaggtcatac cagttatgac ctctgtactt ataacaacaa cgtaaggtta ttgcgctatg
    71281 caaacacaaa taaaagttcg tggatatcat ctcgacgttt accagcacgt caacaacgcc
    71341 cgctaccttg aatttctcga agaagcccgc tgggatgggt tggaaaatag cgacagtttt
    71401 cagtggatga cggcccataa catcgccttc gtcgtggtca atatcaatat taactatcgt
    71461 cgcccagcgg tattaagtga cctgttaact attaccagtc agttgcagca attaaacggt
    71521 aaaagcggca tcttaagcca ggtcattaca ctggagccgg aagggcaggt ggtagcggat
    71581 gcgcttatta cgtttgtttg tattgatctt aaaacgcaga aagcattagc tctggaaggg
    71641 gaattgcgcg aaaagctgga gcagatggtt aagtaaacgt tttgtggtgc cggatgctca
    71701 agccgcatcc ggcgacaccc ggaataatta cctcaacccg gttttctgct tcatcgctgc
    71761 catcaccgtc ggtttatcgg ccagataatg attcaaaccg ttggcgcgta aattacatgc
    71821 cgcacaatga ccgcaaccgt cgcctttaat gccgttatag caggtcaacg tttcgttacg
    71881 gactaaatcc agtttgccgt aataatctgc cagcgcccag gtttccgctt tatcaatcca
    71941 catcagcggc gtttcaaaac gaatatcttt cgccatgccc aaactgacgg catggtttag
    72001 tgctttcaca aactcatcgc ggcaatccgg gtagccggag aaatccgttt cacagacgcc
    72061 ggtaattacg gcttctgctt ttacctgata cgcatatatt gccgccagcg tcaggaacaa
    72121 aatattacgc cctgggacaa acgtattcgg gatgccatcg gcttcaggtt cataatcagg
    72181 caccggaatg ctgtcacgtg tcaggctgct gaccgccagc tcgttgagca gcgttacatc
    72241 aagaacctta tgcgcgcgtg ctcccagttt cagcgccagt tcgcgtgcca cgtcgatttc
    72301 tgcgcgatgt cgctgaccgt aatcgaacgt cacgcaatgg acttcatcat attgttgtaa
    72361 tgcctgcacc agacaggtgg tggaatcctg gcctccactg aacacaacga cagcacgttt
    72421 catagataat cctgcttgaa caataaaagc gttatggtaa cgcctgcgat taacccggac
    72481 cagctattca ttgcgacggc gcgggaagcc aggcttcggt aaattcaaac cagccgcgcg
    72541 gtgtcagtcg cacaccgttc acgccgggag gggcactaat gcgatagtga tagttgaaca
    72601 gcggcgtcag cgtcgcgtct gccattaact ggctaaaaac cgctttcagg gcattaaatc
    72661 ggttttcctc atcaggcatt acttgcaccg cgtccagcgt cgattgcaga tgtgcatatg
    72721 ctggagcgtc gaaaacatgt ggccatagtg gatcgcaacg tagccattgc tccagagtat
    72781 attccggtgc ttcgccaatt aatctgtcgc ccatcatgag gtctgcgtgt gccagtaggg
    72841 tcgtgtcgtc ccagtttttt gcgttatgaa aaataattgt gagttcacag ccttccgctg
    72901 ccagtgtcgc ctgtaggcgt tctgccatgg tatgaagttc tatcggtagg tgataaacca
    72961 gcgtcaaggt tttcggtagt ttgacttcat ccggtacttg ccagtgcgga atagtccagc
    73021 ctggcagtaa tgcatgactg gcggtgatca ggttttctcc gacttctaac gtttgtaata
    73081 aaccggattg atgaataatg gagatcactt ttcgcgcctg ccagagggag agtcggggac
    73141 ttttgcgcaa cgttaaatag caaaaaccta aactgatgcc actactgacc tggctgaccc
    73201 gttgcagctc ctccggtttg ccgatggtga tttgcacggg atgccgacaa ctggttccca
    73261 aatctttttc gaaaagcggc ggagttatcc agtactcaac cgctttaagc agcggatgac
    73321 gcaaatggta ataatcatgg ctctccaggc gcaccagctc cgctgtgaat tgtgttaagc
    73381 gaaaaggacc agtgccgatc agtgggaatt gcggatgcgc cagatggctg caatagctcg
    73441 ccagccggtg cgcaagccag taatcggggc gatgtaaaaa gaaggtcaga cactgcggat
    73501 gggtgacttc aatacgcttc acgctaataa ataattgatc cagtgctggc agttgtaaca
    73561 gcatcaataa tcgctggtgt aagtgtgagg cttttactgc atcgccgtta tgccagtgta
    73621 gggttgaacg aagataaaag tcccagcgta acccgtcagt agaggtttcc cagtgatgcg
    73681 ctaaatcgcc aatcgggcgc tgagtattat tatcgaagcg ggtcaggccg gaaaatatct
    73741 gcccggcgag atgctgctcg gcacggccgg gcaaaaagcc tggttgtagc ggttcgagcg
    73801 ggcgatagta gggaatacgc aacgtgggtg tatcgttttg ccattgtccg cccataaacg
    73861 gctgtaacag agtgcgtagc tcacctgggg ccagttgcgc cagctccagc acatcttgct
    73921 gctttccggt ttccagtgcc tgttccatca tcgcattgcg tagcgattcc ggcgtgacca
    73981 gaaagcgtaa ttgtccgcgc tttccgcgtc ctgactgcgc ctgccactcc agccatcccg
    74041 cctcctgtgc ctgacgcaac agcgtacgaa catggcgttc gctgcaaaaa cagcgttcgg
    74101 ccagttcgct gacggtgacg gtttgcggct ttccggctga aggttgccac agacgttgat
    74161 actggttaag acggttgagc aatcgcatat aaacccggaa caatattatt taactattca
    74221 ctattacttc cgtatatatc aggtgatact caatctccat taaccgtgtc acagagtgga
    74281 gaaagaaatg gctcgtctgg cagcatttga tatggatggc actttattga tgcctgacca
    74341 tcatttaggt gagaaaaccc tctctacttt ggcgcgactg cgtgaacgcg acattaccct
    74401 cacttttgcc acggggcgtc atgcgctgga gatgcagcat attctcgggg cgctatcgct
    74461 ggatgcatat ttgattaccg gcaacggaac gcgcgtgcat tctctggaag gtgaactttt
    74521 acatcgtgat gatttacctg cggatgtcgc ggagctggtg ctgtatcagc aatgggatac
    74581 ccgagccagc atgcatatct tcaatgacga cggttggttt accgggaaag agatccctgc
    74641 gttgttgcag gcatttgtct atagcggttt tcgttatcag ataatcgatg tcaaaaaaat
    74701 gccactcggc agcgtcacca agatctgctt ctgtggcgat cacgacgatc ttacacgctt
    74761 gcagatccag ctatacgaag cattaggcga gcgtgcacat ttgtgttttt ccgccacgga
    74821 ttgcctcgaa gtgctgccgg tgggctgcaa taaaggcgct gcattgacgg tgctgaccca
    74881 acatctaggt ttatcgttgc gcgattgcat ggcctttggt gatgcgatga acgatcgcga
    74941 aatgttaggc agcgtcggta gcgggtttat tatgggcaat gcgatgccgc aactgcgcgc
    75001 ggagctcccg catttaccgg tgattggaca ttgccgaaat caggctgtct ctcactattt
    75061 gacgcactga ctggactatc cacatctacc ttattccccc gaataatgag atcccttcca
    75121 gcaccgggca attgcccggt tttttttgcg ttgaatttgt cattttgtgc cgtggtgttt
    75181 aaaccgcaca gaataaattg tcgtgatttc acctttaaaa tagaattaaa agagaaaaaa
    75241 attctctgtg gaagggctat gttagataaa attgaccgta agctgctggc cttactgcag
    75301 caggattgca ccctctcttt gcaggcactg gctgaagccg ttaatctgac aaccacccct
    75361 tgctggaagc gcctgaaacg gctggaggac gacggtatcc ttatcggcaa agtcgccctg
    75421 ctggatccgg aaaaaatagg cctcggcctg accgcctttg tgctgataaa aacgcaacat
    75481 cacagtagcg aatggtattg ccgctttgtc acggtggtta ccgaaatgcc agaagtgctg
    75541 gggttctggc gcatggctgg tgaatacgat tatctgatgc gcgtccaggt tgccgacatg
    75601 aaacgctacg acgagtttta taagcgtctg gtaaacagcg tgccggggct gtcggacgtc
    75661 acttccagct tcgcgatgga acagattaaa tacaccactt ctttacccat cgaataaata
    75721 tccagaatca ggtcaggaca caacgcgtgc gattatttgc tcaattaagc tggtatttcc
    75781 gtcgggaatg gcgtcgctat ctcggggctg tcgccttgct tgtcattatc gcgatgctgc
    75841 aactggttcc gccaaaagtg gttggtattg ttgtcgatgg cgtgacagaa caacacttta
    75901 ctaccgggca gatcctgatg tggatcgcca ccatggtgct gattgccgtt gtggtttatt
    75961 tcctgcgtta cgtctggcgg gtattgctgt ttggtgcgtc ttatcaactg gctgttgaac
    76021 tgcgtgaaga ttattaccgt cagctaagcc ggcagcatcc tgagttttac ctgcgtcatc
    76081 gcacgggtga cctcatggct cgtgcgacca atgacgtcga tcgcgtcgtg tttgcagccg
    76141 gagaaggggt gctgacgctg gtggattcac tggtgatggg ctgcgctgtg ttgattatga
    76201 tgtctacgca aattagctgg cagttgacct tatttgccct gttgccgatg ccagtgatgg
    76261 cgatcatgat caagcgcaac ggcgatgcct tgcatgaacg ctttaagctg gcacaggcgg
    76321 cgttttctag tcttaatgac cgcacccagg aaagcctcac cagtatccgc atgatcaaag
    76381 cctttggtct ggaagatcgc cagtcggcgt tatttgccgc ggatgccgaa gataccggca
    76441 aaaaaaacat gcgggtggcg cgtattgatg ctcgtttcga cccgaccatc tatatcgcga
    76501 ttggtatggc gaacttgctg gcgattggcg gcggtagttg gatggtggtg cagggcagtt
    76561 taacgctggg ccagctcacc agttttatga tgtatttagg tctgatgatt tggccaatgc
    76621 tggcgctggc atggatgttt aacattgtgg aacgtggtag tgctgcatac agccgtattc
    76681 gcgcgatgct ggcggaagcg ccggtggtga acgatggtag cgaacccgtg ccggaagggc
    76741 gtggcgaact ggatgtaaat attcaccagt tcacgtatcc gcagactgac catcctgcgc
    76801 tggaaaacgt caatttcgcc ctgaaacccg gtcagatgct gggtatctgc gggccgactg
    76861 gttccggcaa aagtaccctg ttgtcgctca ttcagcgtca tttcgacgtc agcgaggggg
    76921 atattcgctt tcatgatatt cctctgacga agttacaact cgatagctgg cgtagccgcc
    76981 tggcggtagt tagccagaca ccgttccttt tttccgacac cgtagcgaac aacatcgcgt
    77041 tgggttgccc gaatgccacc cagcaagaga ttgagcatgt cgcgcggtta gccagcgtac
    77101 atgacgatat tttgcgtcta ccgcaaggtt acgatacaga agtgggcgag cgcggcgtga
    77161 tgctttccgg tgggcaaaaa cagcgtatct ccattgctcg agcgttatta gtcaacgcgg
    77221 aaatcctcat ccttgatgat gcgctttcgg cggtggacgg acgcacagag caccagatcc
    77281 tgcataacct gcgtcagtgg ggacagggaa gaacggtaat catcagtgcc catcgccttt
    77341 cggcactgac ggaagccagt gaaaatgtaa tgaacgcatc ccacacaatt aaacacggag
    77401 cagtatgatg gttaaaaggg tgaaactggc aggtgtggag cctcgcagat ttccggcatc
    77461 atagtgccca atacgggatg cataaagctc cctcagactg gagactccac aaatgaaata
    77521 tacaccggtt ggcgttgata tcgcaaaaca tgtcattcag attcacttca tcaatgagca
    77581 cacaggtgaa gtggttgata aacagttgcg tagacaggat tttctgacgt tcttcggcaa
    77641 ccgtgagcca tgcctgattg gtatggaggc ctgtggaggt tctcagcact gggcacggga
    77701 actgacaaaa cttggtcata aagtccggtt gttgcaggcc cgcttcgtta aggcattcgt
    77761 catgggcaat aagaatgatg tgatggatgc ccgggctatc tggatggcgg ttcagcagcc
    77821 gggtaaagaa atcgccgtaa aaacagaaga acagcagtcg gtactggttc tgcaccgtac
    77881 ccgcatgcaa ctggtgaagt tccggaccgc acaaattaat gccctgcacg ggacgttact
    77941 ggagtttggt gaaaccatcc acaaaggccg ggcagcgatg gagcgggagt tccccgaagc
    78001 actggaacgg atgaaagaga gactgccacc gtatctcatt atggttctgg aaaaccagta
    78061 caaccgactg aatgagctgg actcactgat agaggatatt gaaaaacagc ttaccagcgt
    78121 ggcgaggcag aatgaaacct gtaagcggtt gctggatatt cctggcgttg gaccacttat
    78181 tgcgacggca gcggtggcca ccatggggga agcatcagcg tttaaatcgg ggcgagagtt
    78241 cgccgcatat gttggtctgg ttccaaaaca aactggctcc ggagggaaag tacgtctgct
    78301 ggggataagc aaacgtggtg acacttatct caggacatta tttatccacg gtgcaagagc
    78361 ggtggcatta gtagctaaag agcctggccc gtggataacc gaactgaaaa aacgtcgtcc
    78421 agccagtgtg gcaatcgtcg ccatggcaaa caagctggca cgaacagtat gggcgataac
    78481 cgcccatgac cgtaagtatg acaggaacca cgtcagtatc agaccatatt aatcgctgat
    78541 accattaaac aatgaactct taacaaaagg gtgaatgctg aaaggttgct atggcggcca
    78601 gagtgatgac aaagacaggt aagaccgtga ctcactaaac ctgaacagta ttttgggctt
    78661 gaagtccgcc gtgaaaataa ggggtgagtc ggcgaattac ataggggctc gcagcgttac
    78721 ggctgcaata aagccggata taaagctgca acctacccgt catgtcaaaa caatggatgc
    78781 cttgcaaatg ggatgcgttc atataaatta ttgtgatgca gcacggacat atcgcccagc
    78841 gtggcaatca tgatgagttg gcgcaacaaa gcggctggta tcgcgatatg tatcgctatc
    78901 aacaactgga ggcggcgctc gacgacgctc cggaaattcg cgaggaggcc gtcgatgcgt
    78961 agttttagcc aactgtggcc gactctcaag cgtctgttag cgtacggttc gccgtggcgt
    79021 aaaccgctgg ggattgcggt cctgatgatg tgggttgcgg cagcggcaga agtcagtggg
    79081 ccgctgctta tcagctattt tatcgacaat atggtagcga aaaataacct gccgttgaaa
    79141 atggttgcag ggctggctgc ggcgtatgtt gggctacaac tgtttgccgc cgggctacat
    79201 tacgcgcagt cgctgctgtt taatcgggcg gcagtaggcg tagtgcaaca gttgcgtacc
    79261 gacgtgatgg atgccgcatt gcgccagcca ttaagcgagt ttgataccca acccgtcggg
    79321 caggtgattt cccgcgtcac taatgacact gaagtgatcc gcgatctcta cgttaccgta
    79381 gtggcaactg tcctgcgtag cgccgcactg gtgggcgcga tgctggtggc gatgttcagc
    79441 ctcgactggc gaatggcgct ggtggcgata atgattttcc cggtggtgct ggtggtaatg
    79501 gtgatatacc agcgttacag cacgccgatt gtccgtcgtg tgcgcgccta tctggcggat
    79561 atcaacgacg gctttaacga aatcatcaat ggcatgagcg ttatccagca gttccgtcag
    79621 caggcgcgat ttggcgaacg tatgggggag gccagtcgtt cacactatat ggccaggatg
    79681 caaaccctgc gcctcgacgg ttttctgctg cgtccgctgc tgagtctgtt ttcatcgctc
    79741 attctttgtg gcttgttgat gctgtttggc ttctccgcta gcggcaccat tgaagtaggc
    79801 gtgctgtatg cgtttatcag ctatcttggg cgacttaacg aacccttaat cgaactgacc
    79861 acgcaacagg cgatgctgca acaggctgtt gttgctggtg agcgcgtgtt tgaactgatg
    79921 gacggaccgc gccagcaata tggcaatgat gatcgcccgt tacagagtgg caccatcgaa
    79981 gtcgataacg tgtcatttgc ttatcgcgat gacaatctgg tgctaaagaa cattaatctc
    80041 tctgtgcctt cgcgtaactt tgtggcactg gtcgggcata ccggcagtgg caaaagcacc
    80101 ctcgccagtt tattgatggg ctattacccg ctaacggaag gtgagattcg ccttgatggt
    80161 cgtccattaa gttcgctaag tcacagcgcg ctgcgccagg gcgtggcaat ggtgcagcaa
    80221 gatccggtgg tgctggcgga taccttcctc gccaacgtga cgctggggcg tgatatctcc
    80281 gaagaacgcg tctggcaggc gctggaaacc gtgcaactgg cggagctggc gcgcagcatg
    80341 agtgatggta tttatacgcc gctgggcgag caggggaata atctctccgt cgggcaaaag
    80401 caactgctgg cactggcacg cgtgttggtg gagacgccgc aaatcctgat ccttgatgag
    80461 gcaaccgcca gcattgactc cggtactgaa caggcgattc aacatgctct ggcggctgtg
    80521 cgtgaacata ccacgctggt ggtgattgct caccgcttat cgaccattgt tgatgccgac
    80581 accattctgg tgcttcatcg tgggcaagcc gtggagcagg gcactcacca gcaactgctg
    80641 gcggcccagg gacgctactg gcagatgtat caactgcaac ttgcgggcga agagctggca
    80701 gccagcgtgc gtgaagaaga atcattgagc gcctgaatag cgcaatattt catcgttggt
    80761 gcaaaaatgt aacgcactgt gcactgtcat agtgcgtttt cattttcaat cttcttaact
    80821 tcctgctctc tttctcgttt ttcatttctg gcacaccgct tgcaatacct tcttcgtgta
    80881 gcagaaccat taccgaattc tgactggagg ggatctatga agctggtgac cgtgataatc
    80941 aaaccattca agctggaaga cgttcgtgaa gcgttatctt ccattggtat tcagggcctg
    81001 accgtcaccg aagtgaaagg tttcgggcgt cagaaagggc atgccgagct gtaccggggg
    81061 gcggaataca gcgtcaactt cctgccaaaa gtaaaaattg atgtggcaat tgctgatgac
    81121 caactcgatg aagtgatcga tatcgtcagt aaggcggctt acaccggaaa aattggcgac
    81181 ggcaaaatct tcgtcgctga attgcaacgc gtcattcgta ttcgtaccgg cgaagccgac
    81241 gaagcggcgc tgtaatctct ggcacacagc aacaggaacg aaaaatgaag atagcgacga
    81301 taaaaactgg gcttgcttca ctggcgatgc tgccgggact ggtaatggct gcacctgcgg
    81361 tggccgataa agccgacaat gcgtttatga tgatttgtac tgcgctggtg ctgtttatga
    81421 ctattccggg gattgccctg ttttacggtg ggttgattcg cggcaaaaac gtgctgtcga
    81481 tgctgatgca ggtgacggtg acgtttgcac tggtctgtat tctctgggtg gtttacggtt
    81541 actcgctggc gtttggtgag ggtaacaact tcttcggcaa cgttaactgg ttgatgctga
    81601 aaaacatcga actgacggcg gtgatgggca gcatttatca gtatatccac gtagcgtttc
    81661 agggatcgtt tgcctgcatt accgtaggct tgatagttgg ggcgctggcg gaacgaatcc
    81721 gcttctcagc tgtgttgatt ttcgtggtgg tatggctgac gctctcttac attccgattg
    81781 cgcatatggt gtggggcggc ggtttgctgg cttctcacgg tgcactggat ttcgcgggtg
    81841 gcacagtggt gcacattaac gccgcaatcg ccggtctggt gggcgcgtat ctgataggca
    81901 aacgcgtggg cttcggtaaa gaggcgttta aaccgcacaa cctgccgatg gtcttcaccg
    81961 ggactgccat tctctatatc ggttggtttg gctttaacgc cgggtcagcg ggcacggcga
    82021 atgaaatcgc ggcactggca tttgtgaata ctgtggtcgc aacggcggcg gcaattcttg
    82081 gctggatctt cggtgaatgg gcgctgcgtg gtaagccttc actgctgggg gcgtgttctg
    82141 gcgcgattgc cggtctggtc ggcgtgacgc cagcgtgcgg ctacattggg gttggcggcg
    82201 cgttgattat cggcgtggta gctggtctgg cgggcttgtg gggcgttacc atgctcaaac
    82261 gcttgctgcg ggtggatgat ccctgcgatg tcttcggtgt gcacggcgtt tgtggcattg
    82321 tcggctgtat catgaccggg atttttgccg ccagctcgct gggcggcgtg ggcttcgctg
    82381 aaggtgtgac gatgggtcat cagttgctgg tacagctgga aagcatcgcc attacgatcg
    82441 tctggtccgg tgtggtggca tttattggct acaaattggc ggatctgacg gttggtctgc
    82501 gtgtaccgga agagcaggag ctagaagggc tggatgtcaa cagtcacggc gagaatgcct
    82561 ataacgcgta acaagcactg caaaaaacag ccggacggtt ttcacctccg gctatttttt
    82621 taattgtgat tacgcatcac cccttcctga acggtcgagg caaccagtac gccgtcctgg
    82681 gtataaaact caccgcgcac aaagccacgt gcgctggacg ccgaggtgct ctccacgcta
    82741 tacagcagcc attcattcaa attaaacggg cgatggaacc acatggaatg gtcaatggtg
    82801 gcaatctgaa tccccggttc gagaaaaccg atgccgtgcg gctgtagagc taccggcagg
    82861 aagttaagat cagaagcgta accgagcaga tactgatgaa cgcgcaggtc atccggcacg
    82921 ctaccatttg cgcggatcca cacctgacga tgtggttctg cgacgtgacc tttcagtggg
    82981 ttatgaaact ccaccggacg gacttccagc ggacgatcgc agatgaattt atctttaagc
    83041 actggcggca gcaggtgcgc cagcgattgg gcgatttgcg tttccgaagg caggccatca
    83101 ggcgctggcg cggacggcat tgttttttga tgttcgaaac ccgcttctgg tgcctggaaa
    83161 gaggccgtca tataaaaaat cggtttgccg ttttgaatag cagcaacccg gcgggcgctg
    83221 aagctgttac catcacgcag cgtttcgaca tcataaataa tcggtttctt actatcgcct
    83281 gggcgaagaa agtagctgtg aaacgaatgt accagccgct cttccgggac ggtctctttt
    83341 gcagcataca aggcctgacc cacgacctgg ccgccaaaca cctggcgtaa acctaaatct
    83401 tcactctggc cgcgaaagag tcctgcctca attttttcca gatttaacaa tgccagtaaa
    83461 ttttttagcg cctgactcat ataactctcc agtaacaaag ctgccgcagc aagccaaagt
    83521 gagttgagta taacgcaaat ttgccactgg tccgatgggt gcaataatct gaattacggg
    83581 ctaattacag gcagaaatgc gtgatgtgtg ccacacttat tgacgttact attttgttaa
    83641 ccactcttcc ggcgaggaaa gttagcccgc tggtgcattg ataataagga gaaatgaatg
    83701 aaactcgtgc acatggccag tggtttagcg gttgcgattg cgttggcggc ttgcgcagat
    83761 aaaagcgcgg atattcagac gccagccccg gctgcaaata cgtctatttc agcaacacaa
    83821 caacctgcta tccagcaacc gaatgtctcc ggtaccgtct ggatccggca gaaagtcgca
    83881 ctgccgcctg atgctgtgct gaccgtgaca ctttctgacg cgtcgttagc cgatgcaccg
    83941 tcaaaagtgc tggcgcagaa agcggtgcgt accgaaggta aacagtcacc attcagcttt
    84001 gttctgccat ttaacccggc agatgttcag ccgaacgcgc gtattctgtt gagtgcggcg
    84061 attaccgtga atgacaaact ggtatttatt accgataccg ttcagccggt gatcaacaag
    84121 ggcggaacta aagccgacct gacattggtg ccggtgcagc aaaccgccgt gccggttcag
    84181 gccagcggtg gtgcaacgac taccgtacct tcgacttcac caactcaggt gaatccgtct
    84241 tcggcagttc cagctcctac gcaatattaa gcgacgttaa ccctctccgc ccggagaggg
    84301 ttagtagttc cagcgataac gctgcaagtc gatttgcccg cttcccgata ccatcacacc
    84361 ttctgccagt aatgcctgtc gctgacgctg taaatccggt ccggttagcg aaattgtgcc
    84421 gtggcgatta accacccggt gccagggtaa ggtgctgcct tcagggagac gctttaacac
    84481 accgcccacc tggcgcgcgg cgcggggcga tcccgccagt ttcgccacat caccgtaagt
    84541 ggtgacatag ccttcgggaa tagcggcgac gatttgccag acgcgttggg gaaatgaatc
    84601 ttctttttcc atcttttctt cctgaggtaa tttttcagca taatctggaa aaacgcccga
    84661 gtgaagtcgc attgcgcaag aaaccagcat ctggcacgcg atgggttgca attagccggg
    84721 gcagcagtga taatgtgcct gcgcgttggt tctcaacgct ctcaatgggg gctctgttgg
    84781 ttctcccgca acgctactct gtttaccagg tcaggtccgg aaggaagcag ccaaggcaga
    84841 tgacgcgtgt gccgggatgt agctggcagg gcccccaccc atttctgcct cccaccgttt
    84901 cgtcaaaaaa aaccaacatg gctaaacttt aaccacaact gacgtcgcaa gaattgtctg
    84961 gctgcgcagt acgcttcgga ggtatgtctg atgaagtatg ttgatggttt tgtggttgcc
    85021 gttcctgccg ataaaaagga tgcctatcgg gaaatggccg ctaaggctgc gccattgttt
    85081 aaagagtttg gcgcgcttcg tattgtcgaa tgctgggcca gcgatgtacc ggatggcaaa
    85141 gtgaccgatt ttcgtatggc ggtgaaagcg gaagagaatg aagaggttgt ctttagctgg
    85201 attgaatacc cttcaaaaga ggtccgcgac gctgctaatc aaaagatgat gtcggaccca
    85261 cggatgaaag agttcggcga gtccatgccg tttgacggca agcgaatgat ctatggcgga
    85321 ttcgagtcaa tcatcgacga ataggtagcg tg
//
LOCUS       DAJVUK010000003        79454 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.003, whole genome shotgun sequence.
ACCESSION   DAJVUK010000003 DAJVUK010000000
VERSION     DAJVUK010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 79454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 79454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..79454
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.003"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            414..1616
                     /gene="proV"
                     /locus_tag="OQQ57_000187"
     CDS             414..1616
                     /gene="proV"
                     /locus_tag="OQQ57_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HCS1955082.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DREGVNNG"
     gene            1609..2673
                     /gene="proW"
                     /locus_tag="OQQ57_000188"
     CDS             1609..2673
                     /gene="proW"
                     /locus_tag="OQQ57_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HCS1955083.1"
                     /translation="MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLLTRPFIK"
     gene            2731..3723
                     /gene="proX"
                     /locus_tag="OQQ57_000189"
     CDS             2731..3723
                     /gene="proX"
                     /locus_tag="OQQ57_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708493.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HCS1955084.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTLLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKEPKIAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
     gene            4015..5199
                     /locus_tag="OQQ57_000190"
     CDS             4015..5199
                     /locus_tag="OQQ57_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1955085.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRAL
                     LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
                     AN"
     gene            5323..6060
                     /gene="ygaZ"
                     /locus_tag="OQQ57_000191"
     CDS             5323..6060
                     /gene="ygaZ"
                     /locus_tag="OQQ57_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine exporter subunit YgaZ"
                     /protein_id="HCS1955086.1"
                     /translation="MESPTPQPALGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            6050..6385
                     /gene="ygaH"
                     /locus_tag="OQQ57_000192"
     CDS             6050..6385
                     /gene="ygaH"
                     /locus_tag="OQQ57_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HCS1955087.1"
                     /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVMAII"
     gene            6476..7006
                     /gene="emrR"
                     /locus_tag="OQQ57_000193"
     CDS             6476..7006
                     /gene="emrR"
                     /locus_tag="OQQ57_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HCS1955088.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            7133..8305
                     /gene="emrA"
                     /locus_tag="OQQ57_000194"
     CDS             7133..8305
                     /gene="emrA"
                     /locus_tag="OQQ57_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HCS1955089.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
                     KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG"
     gene            8322..9860
                     /gene="emrB"
                     /locus_tag="OQQ57_000195"
     CDS             8322..9860
                     /gene="emrB"
                     /locus_tag="OQQ57_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HCS1955090.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWECGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
                     EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
                     GGAH"
     gene            complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="OQQ57_000196"
     CDS             complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="OQQ57_000196"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HCS1955091.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGSHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPKEKLQELHI"
     gene            complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="OQQ57_000197"
     CDS             complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="OQQ57_000197"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HCS1955092.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTQATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCCDISGTDAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGKAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMETADTE
                     PFAVWLEKHA"
     gene            complement(12218..12646)
                     /locus_tag="OQQ57_000198"
     CDS             complement(12218..12646)
                     /locus_tag="OQQ57_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1955093.1"
                     /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(12643..13198)
                     /gene="yqaB"
                     /locus_tag="OQQ57_000199"
                     /pseudo
     CDS             complement(12643..13198)
                     /gene="yqaB"
                     /locus_tag="OQQ57_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
     gene            complement(13346..13422)
                     /locus_tag="OQQ57_000200"
     tRNA            complement(13346..13422)
                     /locus_tag="OQQ57_000200"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13386..13388),aa:Arg,seq:acg)
     gene            complement(13621..13697)
                     /locus_tag="OQQ57_000201"
     tRNA            complement(13621..13697)
                     /locus_tag="OQQ57_000201"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13661..13663),aa:Arg,seq:acg)
     gene            complement(13895..13971)
                     /locus_tag="OQQ57_000202"
     tRNA            complement(13895..13971)
                     /locus_tag="OQQ57_000202"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13935..13937),aa:Arg,seq:acg)
     gene            complement(13975..14067)
                     /locus_tag="OQQ57_000203"
     tRNA            complement(13975..14067)
                     /locus_tag="OQQ57_000203"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14031..14033),aa:Ser,seq:gct)
     gene            complement(14383..14568)
                     /gene="csrA"
                     /locus_tag="OQQ57_000204"
     CDS             complement(14383..14568)
                     /gene="csrA"
                     /locus_tag="OQQ57_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HCS1955094.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            complement(14803..17433)
                     /gene="alaS"
                     /locus_tag="OQQ57_000205"
     CDS             complement(14803..17433)
                     /gene="alaS"
                     /locus_tag="OQQ57_000205"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HCS1955095.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKDANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
                     PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            complement(17561..18061)
                     /gene="recX"
                     /locus_tag="OQQ57_000206"
     CDS             complement(17561..18061)
                     /gene="recX"
                     /locus_tag="OQQ57_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HCS1955096.1"
                     /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
                     REATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            complement(18304..19365)
                     /gene="recA"
                     /locus_tag="OQQ57_000207"
     CDS             complement(18304..19365)
                     /gene="recA"
                     /locus_tag="OQQ57_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HCS1955097.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            complement(19445..19942)
                     /gene="pncC"
                     /locus_tag="OQQ57_000208"
     CDS             complement(19445..19942)
                     /gene="pncC"
                     /locus_tag="OQQ57_000208"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HCS1955098.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMVIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            complement(20087..21172)
                     /gene="mltB"
                     /locus_tag="OQQ57_000209"
     CDS             complement(20087..21172)
                     /gene="mltB"
                     /locus_tag="OQQ57_000209"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HCS1955099.1"
                     /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTRYSISQLATAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            21428..21991
                     /gene="srlA"
                     /locus_tag="OQQ57_000210"
                     /gene_synonym="gutA"
     CDS             21428..21991
                     /gene="srlA"
                     /locus_tag="OQQ57_000210"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HCS1955100.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSQGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            21988..22947
                     /gene="srlE"
                     /locus_tag="OQQ57_000211"
                     /gene_synonym="gutE"
     CDS             21988..22947
                     /gene="srlE"
                     /locus_tag="OQQ57_000211"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HCS1955101.1"
                     /translation="MTRIRIEKGTGGWGGPLELEATPGKKIVYITTGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            22958..23329
                     /gene="srlB"
                     /locus_tag="OQQ57_000212"
                     /gene_synonym="gutB"
     CDS             22958..23329
                     /gene="srlB"
                     /locus_tag="OQQ57_000212"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HCS1955102.1"
                     /translation="MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            23333..24112
                     /gene="srlD"
                     /locus_tag="OQQ57_000213"
     CDS             23333..24112
                     /gene="srlD"
                     /locus_tag="OQQ57_000213"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HCS1955103.1"
                     /translation="MNQVAVVIGGGQTLGAFLCHGLVAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLVEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            24217..24575
                     /gene="gutM"
                     /locus_tag="OQQ57_000214"
                     /pseudo
     CDS             24217..24575
                     /gene="gutM"
                     /locus_tag="OQQ57_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
     gene            24642..25415
                     /gene="srlR"
                     /locus_tag="OQQ57_000215"
                     /gene_synonym="gutR"
     CDS             24642..25415
                     /gene="srlR"
                     /locus_tag="OQQ57_000215"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HCS1955104.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESEPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKLASFHGQLAENA
                     FEHFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            25408..26373
                     /gene="gutQ"
                     /locus_tag="OQQ57_000216"
     CDS             25408..26373
                     /gene="gutQ"
                     /locus_tag="OQQ57_000216"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HCS1955105.1"
                     /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
                     VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
                     MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
                     QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
     gene            complement(26370..27884)
                     /gene="norR"
                     /locus_tag="OQQ57_000217"
     CDS             complement(26370..27884)
                     /gene="norR"
                     /locus_tag="OQQ57_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HCS1955106.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKGVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
                     LLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
                     NLLQHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD"
     gene            28071..29510
                     /gene="norV"
                     /locus_tag="OQQ57_000218"
     CDS             28071..29510
                     /gene="norV"
                     /locus_tag="OQQ57_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HCS1955107.1"
                     /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
                     ARQWALAPLPQSTVNKVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
                     PWSEVPDNFLCPECSLGKDVFEELASEAK"
     gene            29507..30640
                     /gene="norW"
                     /locus_tag="OQQ57_000219"
                     /pseudo
     CDS             29507..30640
                     /gene="norW"
                     /locus_tag="OQQ57_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417191.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
     gene            complement(30768..33020)
                     /gene="hypF"
                     /locus_tag="OQQ57_000220"
     CDS             complement(30768..33020)
                     /gene="hypF"
                     /locus_tag="OQQ57_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HCS1955108.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLREDPETFLVQLHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSAGGAMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPKYVV
                     HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCHGVTHPVTMPLVDNQLDLAAFWQQWLNWQAQVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(33173..33700)
                     /gene="hydN"
                     /locus_tag="OQQ57_000221"
     CDS             complement(33173..33700)
                     /gene="hydN"
                     /locus_tag="OQQ57_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HCS1955109.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            complement(33849..34859)
                     /gene="ascG"
                     /locus_tag="OQQ57_000222"
     CDS             complement(33849..34859)
                     /gene="ascG"
                     /locus_tag="OQQ57_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator AscG"
                     /protein_id="HCS1955110.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCNAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVETLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
                     DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIHRDSLIAL
                     SR"
     gene            35119..36576
                     /gene="ascF"
                     /locus_tag="OQQ57_000223"
     CDS             35119..36576
                     /gene="ascF"
                     /locus_tag="OQQ57_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HCS1955111.1"
                     /translation="MAKNYAALARSEIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTPRRI
                     GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASADIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYSIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
                     TLLLGFEDIPVEEAAAQARKHQSVQPTVAKEVSLN"
     gene            36585..38009
                     /gene="ascB"
                     /locus_tag="OQQ57_000224"
     CDS             36585..38009
                     /gene="ascB"
                     /locus_tag="OQQ57_000224"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase AscB"
                     /protein_id="HCS1955112.1"
                     /translation="MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMA
                     VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
                     EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
                     ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA
                     LAAKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPA
                     YSARVFREKGVTIDKALGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
                     RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYR
                     ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT
                     LTRTRKKSFWWYKKVIASNGEDLE"
     gene            complement(38168..38638)
                     /gene="hycI"
                     /locus_tag="OQQ57_000225"
     CDS             complement(38168..38638)
                     /gene="hycI"
                     /locus_tag="OQQ57_000225"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HCS1955113.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
     gene            complement(38631..39041)
                     /gene="hycH"
                     /locus_tag="OQQ57_000226"
     CDS             complement(38631..39041)
                     /gene="hycH"
                     /locus_tag="OQQ57_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase assembly protein HycH"
                     /protein_id="HCS1955114.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            complement(39038..39805)
                     /gene="hycG"
                     /locus_tag="OQQ57_000227"
     CDS             complement(39038..39805)
                     /gene="hycG"
                     /locus_tag="OQQ57_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HCS1955115.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
                     APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
                     GLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
                     LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEVRIR"
     gene            complement(39805..40347)
                     /gene="hycF"
                     /locus_tag="OQQ57_000228"
     CDS             complement(39805..40347)
                     /gene="hycF"
                     /locus_tag="OQQ57_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HCS1955116.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCLVPSDRIELTRHMKEAI"
     gene            complement(40357..42066)
                     /gene="hycE"
                     /locus_tag="OQQ57_000229"
     CDS             complement(40357..42066)
                     /gene="hycE"
                     /locus_tag="OQQ57_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycE"
                     /protein_id="HCS1955117.1"
                     /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPE
                     VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
                     MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
                     NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
                     LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
                     PLK"
     gene            complement(42084..43007)
                     /gene="hycD"
                     /locus_tag="OQQ57_000230"
     CDS             complement(42084..43007)
                     /gene="hycD"
                     /locus_tag="OQQ57_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HCS1955118.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
     gene            complement(43010..44395)
                     /gene="hycC"
                     /locus_tag="OQQ57_000231"
                     /pseudo
     CDS             complement(43010..44395)
                     /gene="hycC"
                     /locus_tag="OQQ57_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
     gene            complement(44381..44641)
                     /locus_tag="OQQ57_000232"
                     /pseudo
     CDS             complement(44381..44641)
                     /locus_tag="OQQ57_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708526.1"
                     /note="regulates several genes involved in the formate
                     hydrogenlyase system; seems to prevent binding of FhlA
                     transcriptional activator to the activator sequence of hyc
                     operon; incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            44853..45203
                     /gene="hypA"
                     /locus_tag="OQQ57_000233"
     CDS             44853..45203
                     /gene="hypA"
                     /locus_tag="OQQ57_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HCS1955119.1"
                     /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEVECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            45207..46079
                     /gene="hypB"
                     /locus_tag="OQQ57_000234"
     CDS             45207..46079
                     /gene="hypB"
                     /locus_tag="OQQ57_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HCS1955120.1"
                     /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            46070..46342
                     /gene="hypC"
                     /locus_tag="OQQ57_000235"
     CDS             46070..46342
                     /gene="hypC"
                     /locus_tag="OQQ57_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HCS1955121.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVITEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            46342..47463
                     /gene="hypD"
                     /locus_tag="OQQ57_000236"
     CDS             46342..47463
                     /gene="hypD"
                     /locus_tag="OQQ57_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HCS1955122.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
     gene            47460..48470
                     /gene="hypE"
                     /locus_tag="OQQ57_000237"
     CDS             47460..48470
                     /gene="hypE"
                     /locus_tag="OQQ57_000237"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HCS1955123.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPCYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            48544..50622
                     /gene="flhA"
                     /locus_tag="OQQ57_000238"
     CDS             48544..50622
                     /gene="flhA"
                     /locus_tag="OQQ57_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /protein_id="HCS1955124.1"
                     /translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALA
                     DNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRRILSRPDTLHCSYEEFC
                     ETWPQLVAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIV
                     SVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYF
                     DIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINL
                     HERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLR
                     QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVL
                     KQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
                     FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN
                     KIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAF
                     TFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDI
                     ALPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMK
                     RLGIDKSALI"
     gene            complement(50659..51012)
                     /locus_tag="OQQ57_000239"
     CDS             complement(50659..51012)
                     /locus_tag="OQQ57_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HCS1955125.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
                     VPELPEKYRPKKPRE"
     gene            complement(51089..51223)
                     /locus_tag="OQQ57_000240"
     CDS             complement(51089..51223)
                     /locus_tag="OQQ57_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955126.1"
                     /translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
                     "
     gene            51299..53860
                     /gene="mutS"
                     /locus_tag="OQQ57_000241"
     CDS             51299..53860
                     /gene="mutS"
                     /locus_tag="OQQ57_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HCS1955127.1"
                     /translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
                     TAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     DVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
     gene            53966..54622
                     /gene="pphB"
                     /locus_tag="OQQ57_000242"
     CDS             53966..54622
                     /gene="pphB"
                     /locus_tag="OQQ57_000242"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HCS1955128.1"
                     /translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETD
                     LLISVGDNIDRGPESLDVLRLLNQPWFISVKGNHEAMELDAFATGDGNMWLASGGDWF
                     FDLNDSEQQEAIDLLLKFHHLPHIIEITNDIIKYVIAHADYPGDEYLFGKEIAESELL
                     WPVYRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIR
                     "
     gene            complement(54673..55440)
                     /locus_tag="OQQ57_000243"
     CDS             complement(54673..55440)
                     /locus_tag="OQQ57_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1955129.1"
                     /translation="MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLE
                     QQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGT
                     TTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATM
                     LRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWL
                     ALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            55636..56544
                     /locus_tag="OQQ57_000244"
     CDS             55636..56544
                     /locus_tag="OQQ57_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCS1955130.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGDAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVIKIFSGITLPGAKS"
     gene            56541..57802
                     /locus_tag="OQQ57_000245"
                     /pseudo
     CDS             56541..57802
                     /locus_tag="OQQ57_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
     gene            57799..58436
                     /locus_tag="OQQ57_000246"
                     /pseudo
     CDS             57799..58436
                     /locus_tag="OQQ57_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
     gene            58441..59217
                     /locus_tag="OQQ57_000247"
     CDS             58441..59217
                     /locus_tag="OQQ57_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HCS1955131.1"
                     /translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAMEFLFPYDYSTLQ
                     IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV
                     HVMAGVVPAGEDAERYRAVFIDNLRYAADRFAPHGKRILVEALSPDVKPHYLFSSQYQ
                     ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE
                     INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR"
     gene            59306..60670
                     /locus_tag="OQQ57_000248"
     CDS             59306..60670
                     /locus_tag="OQQ57_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HCS1955132.1"
                     /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(60764..61756)
                     /gene="rpoS"
                     /locus_tag="OQQ57_000249"
     CDS             complement(60764..61756)
                     /gene="rpoS"
                     /locus_tag="OQQ57_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HCS1955133.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(61819..62910)
                     /gene="nlpD"
                     /locus_tag="OQQ57_000250"
     CDS             complement(61819..62910)
                     /gene="nlpD"
                     /locus_tag="OQQ57_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HCS1955134.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITPPPKMGTTSTAQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSY
                     SGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGG
                     NAITQADAAEQGVVIKTAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTA
                     PVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAI
                     IATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMG
                     STGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            complement(63050..63676)
                     /gene="pcm"
                     /locus_tag="OQQ57_000251"
     CDS             complement(63050..63676)
                     /gene="pcm"
                     /locus_tag="OQQ57_000251"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HCS1955135.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            complement(63670..64431)
                     /gene="surE"
                     /locus_tag="OQQ57_000252"
     CDS             complement(63670..64431)
                     /gene="surE"
                     /locus_tag="OQQ57_000252"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HCS1955136.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            complement(64412..65461)
                     /gene="truD"
                     /locus_tag="OQQ57_000253"
     CDS             complement(64412..65461)
                     /gene="truD"
                     /locus_tag="OQQ57_000253"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HCS1955137.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQHRVNDKELMITAALPGSGEWGTQRKALAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            complement(65458..65937)
                     /gene="ispF"
                     /locus_tag="OQQ57_000254"
     CDS             complement(65458..65937)
                     /gene="ispF"
                     /locus_tag="OQQ57_000254"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HCS1955138.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            complement(65937..66647)
                     /gene="ispD"
                     /locus_tag="OQQ57_000255"
     CDS             complement(65937..66647)
                     /gene="ispD"
                     /locus_tag="OQQ57_000255"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HCS1955139.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            complement(66666..66977)
                     /gene="ftsB"
                     /locus_tag="OQQ57_000256"
     CDS             complement(66666..66977)
                     /gene="ftsB"
                     /locus_tag="OQQ57_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HCS1955140.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            complement(67171..67494)
                     /locus_tag="OQQ57_000257"
     CDS             complement(67171..67494)
                     /locus_tag="OQQ57_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HCS1955141.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            complement(67544..68149)
                     /gene="cysC"
                     /locus_tag="OQQ57_000258"
     CDS             complement(67544..68149)
                     /gene="cysC"
                     /locus_tag="OQQ57_000258"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HCS1955142.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
     gene            complement(68149..69576)
                     /gene="cysN"
                     /locus_tag="OQQ57_000259"
     CDS             complement(68149..69576)
                     /gene="cysN"
                     /locus_tag="OQQ57_000259"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HCS1955143.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTHIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
                     SMSWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKSLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     PSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYPVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            complement(69578..70486)
                     /gene="cysD"
                     /locus_tag="OQQ57_000260"
     CDS             complement(69578..70486)
                     /gene="cysD"
                     /locus_tag="OQQ57_000260"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HCS1955144.1"
                     /translation="MAQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
                     TSERQGRVIDRDQAGSMELKKRQGYF"
     gene            70738..71775
                     /gene="iap"
                     /locus_tag="OQQ57_000261"
     CDS             70738..71775
                     /gene="iap"
                     /locus_tag="OQQ57_000261"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HCS1955145.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
                     AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     gene            complement(71982..72275)
                     /gene="cas2"
                     /locus_tag="OQQ57_000262"
     CDS             complement(71982..72275)
                     /gene="cas2"
                     /locus_tag="OQQ57_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HCS1955146.1"
                     /translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(72275..73195)
                     /gene="cas1e"
                     /locus_tag="OQQ57_000263"
     CDS             complement(72275..73195)
                     /gene="cas1e"
                     /locus_tag="OQQ57_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HCS1955147.1"
                     /translation="MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHI
                     PVGSVACIMLEPGTRVSHAAVHLAATVGTLQVWVGEAGVRVYSSGQPGGARADKLLYQ
                     AKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
                     NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
                     IADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGE
                     IEPPQPAPDMLPPAIPEPETLGDSGHRGRG"
     gene            complement(73192..73842)
                     /gene="cas6e"
                     /locus_tag="OQQ57_000264"
     CDS             complement(73192..73842)
                     /gene="cas6e"
                     /locus_tag="OQQ57_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HCS1955148.1"
                     /translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPSGKERQ
                     FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDISVDAYRQQQ
                     LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            complement(73824..74570)
                     /gene="cas5e"
                     /locus_tag="OQQ57_000265"
     CDS             complement(73824..74570)
                     /gene="cas5e"
                     /locus_tag="OQQ57_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HCS1955149.1"
                     /translation="MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGV
                     GIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPE
                     LLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
                     APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDV
                     PLNRQQWLFGERTVNQGPWLSKEEPCTSQE"
     gene            complement(74581..75659)
                     /gene="cas7e"
                     /locus_tag="OQQ57_000266"
                     /pseudo
     CDS             complement(74581..75659)
                     /gene="cas7e"
                     /locus_tag="OQQ57_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311639.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
     gene            complement(75674..76242)
                     /gene="casB"
                     /locus_tag="OQQ57_000267"
                     /pseudo
     CDS             complement(75674..76242)
                     /gene="casB"
                     /locus_tag="OQQ57_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311640.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
     gene            complement(76239..77801)
                     /gene="casA"
                     /locus_tag="OQQ57_000268"
     CDS             complement(76239..77801)
                     /gene="casA"
                     /locus_tag="OQQ57_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HCS1955150.1"
                     /translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
                     QGAAWQFLLGLLQTSFAPKDQRSWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFM
                     QDFDELKVKATFIASLLPDAPGKQTKERNTDHFIKRDTTQHLCLHCVPLALFSIQLNA
                     PIGGRGYYPGLRGGGPLTTLIELLEYQGNQQTPLWRKLWLNVMPQDEADLPLPKTFDD
                     LVFPWLAPTRTSELDGAVVTDEQVNKLQAYWGMPRRIRIDFKTTSIGNCDICGRQSDA
                     LLGLMSLKNYGVQYVMWRHPLTPYRLPLKEGGDFYSVKPQPGGLIWRDWLGLIEVGNS
                     KNNTELPAQVVKLLNASNLKQTRVGLWGFGFDFEDMKVRCWYEHHFPLLLNKKEDLIP
                     KLRLAAQAASHILSLLHRALKEAWFSEKKTTKLDFGFVDIDFWNKTQHRFLRLVRKIE
                     EGQDPDELLSKWQKEMWLFARQDFDDRVFTNPYEPVDLERVMTARKKYFTTSAEKQNA
                     NAAREKKQEAAE"
     gene            complement(77899..79454)
                     /gene="cas3"
                     /locus_tag="OQQ57_000269"
                     /pseudo
     CDS             complement(77899..79454)
                     /gene="cas3"
                     /locus_tag="OQQ57_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142534.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="CRISPR-associated helicase Cas3'"
BASE COUNT        18739 a        21553 c        20296 g        18866 t
ORIGIN      
        1 gctcctctta tgtgatgggg aaagcggttg aaacagaaga tgaagactgg aatttctgag
       61 ggtgttattt tcaaaaatat cactacccgc agcagggaaa taattcccgc caaatagctt
      121 tttatcacgc aaatattctg tagtgatcta cactgagact ctgttgcatt attcgcctga
      181 aactacaata ttcaggcgtt ttttcgctat ctatgacaaa aaatatcaac ttttctcgat
      241 ttgctctcag cccttatatc acgggaaatt ccggcgattt gctcgcatca atattcatgc
      301 cacatttgcc ctcaggggtt gcctcagatt ctcagtatgt tagggtagaa aaaagtgact
      361 atttccattg ggtaatatat cgacataaac aaataaagga atctttctat tgcatggcaa
      421 ttaaattaga aattaaaaat ctttataaaa tatttggcga gcatccacag cgagcgttca
      481 aatatatcga acaaggactt tcgaaagaac aaattctgga aaaaactggg ctatcgcttg
      541 gcgtaaaaga cgccagtctg gccattgaag aaggcgagat atttgtcatc atgggattat
      601 ccggctcggg taaatccaca atggtacgcc ttctcaatcg cctgattgaa cccacccgcg
      661 ggcaagtgct gattgatggt gtggatattg ccaaaatatc cgatgccgaa ctccgtgagg
      721 tgcgcagaaa aaagattgcg atggtcttcc agtcctttgc cttaatgccg catatgaccg
      781 tgctggacaa tactgcgttc ggtatggaat tggccggaat taatgccgaa gaacgccggg
      841 aaaaagccct tgatgcactg cgtcaggtcg ggctggaaaa ttatgcccac agctacccgg
      901 atgaactctc tggcgggatg cgtcaacgtg tgggattagc ccgcgcgtta gcgattaatc
      961 cggatatatt attaatggac gaagccttct cggcgctcga tccattaatt cgcaccgaga
     1021 tgcaggatga gctggtaaaa ttacaggcga aacatcagcg caccattgtc tttatttccc
     1081 acgatctcga tgaagctatg cgtattggcg accgaattgc cattatgcaa aatggtgaag
     1141 tggtacaggt cggcacaccg gatgaaattc tcaataatcc ggcgaatgat tatgtccgta
     1201 ccttcttccg tggcgttgat attagtcagg tattcagtgc gaaagatatt gcccgccgga
     1261 caccgaatgg cttaattcgt aaaacccctg gcttcggccc acgttcggca ctgaaattat
     1321 tgcaggatga agatcgcgaa tatggctacg ttatcgaacg cggtaataag tttgtcggcg
     1381 cagtttccat cgattcgctt aaaaccgcgt taacgcagca gcaaggtctt gatgcggcgc
     1441 tgattgatgc gccgttagca gtcgatgcac aaacgcctct tagcgagttg ctctctcatg
     1501 tcggacaggc accctgtgcg gtacccgtgg tcgacgagga ccaacagtat gtcggcatca
     1561 tttcgaaagg aatgctgctg cgcgctttag atcgtgaggg ggtaaataat ggctgatcaa
     1621 aataatccgt gggataccac gccagcggcg gacagtgccg tgcaatccgc agacgcctgg
     1681 ggtacaccgg cgactgcacc gactgacggc ggtggtgctg actggctgac cagtacgcct
     1741 gcgccaaacg tcgagcattt taatattctc gatccgttcc ataaaacgct gatcccgctc
     1801 gacagttggg tcactgaagg gatcgactgg gttgttaccc atttccgtcc cgtcttccag
     1861 ggcgtgcgcg ttccggttga ttatatcctc aacggtttcc agcaattgct gctgggtatg
     1921 cccgcaccgg tggcgattat cgttttcgct ctcatcgcct ggcagatttc cggggtcgga
     1981 atgggcgtgg cgacgctggt ttcgctgatt gccatcggcg caatcggtgc ctggtcgcag
     2041 gccatggtta ccctggcgct ggtgttaacc gccctgctgt tctgtatcgt cattggtttg
     2101 ccgctgggga tctggctggc gagaagtccg cgagcggcga aaattattcg tccactgctt
     2161 gatgccatgc agaccacgcc agcgtttgtt tatctggtgc caatcgtcat gctatttggt
     2221 atcggtaacg tgccgggcgt ggtggtgacg atcatctttg ctctgccgcc gattatccgt
     2281 ctgaccattc tggggattaa ccaggttccg gcggatctga ttgaagcctc gcgctcattc
     2341 ggtgccagcc cgcgccagat gctgttcaaa gttcagttac cgctggcgat gccgagcatt
     2401 atggcgggcg ttaaccagac gctgatgctg gccctttcta tggtggtcat tgcctcgatg
     2461 attgccgtcg gcgggctggg tcagatggta cttcgcggta tcggtcgtct ggatatgggg
     2521 cttgccaccg ttggcggcgt cgggattgtg atcctcgcca ttatcctcga tcgcctgacg
     2581 caggccgttg ggcgcgactc acgcagtcgc ggcaaccgtc gctggtacac cactggccct
     2641 gttggtctgc tgacccgccc attcattaag taactctgca cttgcccggt gacgccgggc
     2701 attatcaccc tgccaaaaaa aggaataaca atgcgacata gcgtactttt tgcgacagcg
     2761 tttgccacgc ttatctctac acaaactttt gctgccgatc tgccgggcaa aggtattact
     2821 gttaatccag ttcaaagcac catcaccgaa gaaaccttcc agacgctgct ggtcagccgt
     2881 gcgctggaga aattaggcta taccgtcaac aaacccagcg aagtagatta caacgttggc
     2941 tacaccttgc ttgcttccgg cgatgcaacc ttcaccgccg tgaactggac gccactgcat
     3001 gacaacatgt acgaagctgc cggtggcgat aagaaatttt atcgtgaagg ggtatttgtt
     3061 aacggcgcgg cacagggtta cctgatcgat aagaaaaccg ccgaccagta caaaatcacc
     3121 aacatcgcac aactgaaaga gccgaagatc gccaaactgt tcgataccaa cggcgacggt
     3181 aaagcggatt taaccggttg taatcctggc tggggctgcg aaggtgcgat caaccaccag
     3241 cttgccgcgt atgaactgac caacaccgtg acgcataatc aggggaacta cgcagcgatg
     3301 atggccgaca ccatcagtcg ctacaaagag ggcaaaccgg tgttttatta cacctggacg
     3361 ccgtactggg tgagtaatga gctgaagcca gggaaagatg tggtctggtt gcaggtgccg
     3421 ttctccgcac tgccgggcga taaaaatgcc gataccaaac tgccgaatgg cgcgaattac
     3481 ggcttcccgg tcagcaccat gcatatcgtt gccaacaaag cctggaccga gaaaaatccg
     3541 gcggcagcca aactgtttgc cattatgcag ttgccagtgg ccgatattaa cgcccagaac
     3601 gccattatgc atgacggcaa agcctcagaa ggcgatattc agggccacgt tgatggctgg
     3661 atcaaagccc accagcagca gttcgatggc tgggtgaatg aggcgctggc agcgcagaag
     3721 taatttttat tcaggcggat aaggcgtttt tgccttatcc gccgctctgt acacaatgcc
     3781 tgatgcgacg ctgacgcgtc ttatcatgcc tacaaaatac actcattccg tatggcggat
     3841 aaggcgtttt cgccgcatcc gccgttctgt gcacaatgcc tgatgcgacg ctggcgcgtc
     3901 ttatcatgcc tacaaaccac atcgcacatt tcaacaagct atctttcatc ccatattcat
     3961 caacatccgc tattattgat ttccagctta atcatcacct gatgaacaaa aataatgact
     4021 aaacctaatc atgagcttag cccggcgctg atcgtgctga tgtctatcgc caccggtctg
     4081 gcggtagcca gtaactatta cgcccagcca ttgctcgaca ccatcgcgcg taacttttcc
     4141 ctttccgcca gttcggcagg ctttattgtt accgccgcgc aattgggcta tgcagcaggt
     4201 ctgctgtttc ttgttcccct cggtgatatg tttgaacgcc gccgcctgat tgtctcgatg
     4261 accttactgg cggcaggcgg catgttaatc actgccagca gtcagtcgct ggcgatgatg
     4321 atcctcggta cggcattaac cggtttattc tctgtcgtgg cacaaattct ggttccgctg
     4381 gcagcgacgc tggcttcacc ggacaaacgc ggcaaagtgg ttggcactat tatgagcggt
     4441 ctgctgttgg ggatcttact cgcacggacc gttgccggat tgctggcgaa tctcggcggc
     4501 tggcgcaccg tcttttgggt tgcctcggtg ttaatggcac tgatggcgct ggcattatgg
     4561 cgtggtctgc cacaaatgaa atcagaaacc cacctcaact acccacagtt gttaggttcc
     4621 gttttcagca tgtttatcag cgataagatc ctgcgcaccc gcgcattgct gggctgcctg
     4681 acctttgcca acttcagcat tctctggacc tcaatggcct ttttgcttgc cgctccacct
     4741 tttaactaca gcgatggtgt cattggtctg tttggacttg cgggagctgc cggagcgttg
     4801 ggcgctcgtc cggcgggcgg ttttgccgat aagggtaaat cgcaccacac cacaactttc
     4861 ggtctgctgc tgctattact ttcatggctg gcgatctggt ttggtcacac ttccgtactg
     4921 gcgctgatta tcggcatcct ggtgctggat ctcaccgtac agggcgtgca tatcactaac
     4981 cagacggtaa tttatcgaat acaccctgat gcgcgtaatc gcctgaccgc aggttacatg
     5041 accagctact ttattggcgg tgccgccggt tcgctaattt cagcctcagc ctggcaacat
     5101 ggcggttggg ctggcgtttg tctggctggc gcgacgattg ccctggttaa cttactggtc
     5161 tggtggcgag gttttcatcg tcaggaagcc gcaaattaag caatcagcaa ccgttttcgt
     5221 ggctttacac ttataagggt gttaagaagc ccatcagtct gataaggtta agatattcat
     5281 tcagtctatt tataatatta acaatcgtta agcgtacact ctatggaaag ccctactcca
     5341 cagcctgctc ttggttcggc gaccttcatg gaaggatgca aagacagttt accgattgtt
     5401 attagttata ttccggtggc ctttgcgttc ggtctgaatg cgacccgtct gggattctct
     5461 cctctcgaaa gcgttttttt ctcctgcatc atttatgcag gcgcgagcca gttcgtcatt
     5521 accgcgatgc tggcagccgg gagtagtttg tgggttgctg cactgaccgt catggcaatg
     5581 gatgttcgcc atgtgttgta tggcccgtca ctgcgtagcc gtattattca gcgtctgcaa
     5641 aaatcgaaaa ccgccctgtg ggcatttggc ctgacggatg aggtttttgc cgccgcaacc
     5701 gcaaaactgg tacgcaataa tcgccgctgg agcgagaact ggatgatcgg cattgccttc
     5761 agttcatggt catcgtgggt atttggtacg gtaatagggg cattctccgg cagcggcttg
     5821 ctgcaaggtt atcccgccgt tgaagctgca ttaggtttta tgcttccggc actctttatg
     5881 agtttcctgc tcgcctcttt ccagcgcaaa caatctcttt gcgttaccgc agcgttagtt
     5941 ggtgcccttg caggcgtaac gctattttct attcccgtcg ccattctggc aggcattgtc
     6001 tgtggctgcc tcactgcgtt aatccaggca ttctggcaag gagcgcccga tgagctatga
     6061 ggttctgctg cttgggttac tggttggcgt ggcgaattat tgcttccgct atttgccgct
     6121 gcgcctgcgt gtgggtaatg cccgcccaac caaacgtggc gcggtaggta ttttgctcga
     6181 caccattggc atcgcctcga tatgcgctct gctggttgtc tctaccgcac cagaagtgat
     6241 gcacgataca cgccgtttcg tgcccacgct ggtcggcttc gcggtactgg gtgccagttt
     6301 ctataaaaca cgcagcatta tcatcccaac actgcttagt gcgctggcct atgggctcgc
     6361 ctggaaagtg atggcgatta tataacccac aagaatcatt tttctaaaac aatacattta
     6421 ctttatttgt tactgtcgtt actatatcgg ctgaaattaa tgaggtcata cccaaatgga
     6481 tagttcgttt acgcccattg aacaaatgct aaaatttcgc gccagccgcc acgaagattt
     6541 tccttatcag gagatccttc tgactcgtct ttgcatgcac atgcaaagca agctgctgga
     6601 gaaccgcaat aaaatgctga aggctcaggg gattaacgag acgttgttta tggcgttgat
     6661 tacgctggag tctcaggaaa accacagtat tcagccttct gaattaagtt gtgctcttgg
     6721 atcatcccgt accaacgcga cgcgtattgc cgatgaactg gaaaaacgcg gttggatcga
     6781 acgtcgtgaa agcgataacg atcgccgctg cctgcatctg caattaacgg aaaaaggtca
     6841 cgagtttttg cgcgaggttt taccaccgca gcataactgc ctgcatcaac tctggtccgc
     6901 gctcagcaca acagaaaaag atcagctcga gcaaatcacc cgcaaattgc tctcccgtct
     6961 cgaccagatg gaacaagacg gtgtggttct cgaagcgatg agctaacgcg tcatctcgct
     7021 caaaaatcca gatttataaa agaaaaaatg accggccagc atcgcaacat gctggccttt
     7081 ttggcaagca ggtcggctca gccgatgagt taagaagatc gtggagaaca atatgagcgc
     7141 aaatgcggag actcaaaccc cgcagcaacc ggtaaagaag agcggcaaac gtaagcgtct
     7201 gctcctcctt ctcaccttgc tctttataat tattgccgta gcgataggga tttattggtt
     7261 tttggtactg cgtcatttcg aagaaaccga tgacgcatac gtggcaggga atcagattca
     7321 aattatgtct caggtgtctg gcagcgtgac gaaagtctgg gccgataaca ccgattttgt
     7381 aaaagaaggc gatgttctgg tcactctcga cccgacagat gctcgccagg cgtttgaaaa
     7441 agccaaaact gcactggctt ccagcgttcg ccaaacccac cagctgatga ttaacagcaa
     7501 acagttacag gcgaatattg aggtgcaaaa aatcgccctc gcgaaagcac aaagcgacta
     7561 caaccgccgt gtgccgctgg gcaatgccaa cctgattggt cgcgaagagc tgcaacacgc
     7621 ccgcgacgcc gtcaccagtg cccaggcgca actggacgtc gctattcaac aatacaatgc
     7681 caatcaggcg atgattctgg ggactaaact ggaagatcag cctgccgtgc aacaggctgc
     7741 caccgaagta cgtaacgctt ggctggcgct ggagcgtacc cgtattgtca gtccgatgac
     7801 cggttatgtc tcccgccgcg cggtacagcc tggggcgcaa attagcccaa cgacgccgct
     7861 gatggcggtc gttccagcca ccaatatgtg ggtggatgcc aactttaaag agacgcagat
     7921 tgccaatatg cgtatcggtc agccggtcac tatcaccacg gatatttacg gcgatgatgt
     7981 gaaatacacc ggtaaagtgg ttggtctgga tatgggcaca ggtagcgcat tctcactgct
     8041 tccggcgcaa aatgcgaccg gtaactggat caaagtcgtt cagcgtctac ctgtgcgtat
     8101 cgaactggac cagaaacagc tggagcaata cccgctgcgc attggtttgt ccacgctggt
     8161 gagcgtcaat accactaacc gtgacggtca ggtactggca aataaagtac gttcaacacc
     8221 ggtcgcggta agtaccgcgc gtgaaatcag cctggcacct gtcaataaac tgatcgacga
     8281 tatcgtaaaa gctaacgctg gctaatccag aggtgcgtgt gatgcaacag caaaaaccgc
     8341 tggaaggcgc gcaactggtc attatgacga ttgcgctgtc actggcgaca ttcatgcagg
     8401 tgctggactc caccattgct aacgtggcga tccccactat cgccgggaat ctgggctcat
     8461 cgctcagcca gggaacgtgg gtaatcactt ctttcggggt ggcgaatgcc atctcgatcc
     8521 cgcttaccgg ctggctggca aagcgcgtcg gggaagtgaa actgttcctt tggtccacca
     8581 tcgcctttgc tattgcgtcg tgggagtgtg gtgtctccag cagcctgaat atgctgatct
     8641 tcttccgtgt gattcagggg attgtcgctg ggccgttgat cccactttcg caaagtcttt
     8701 tgctgaataa ttacccgcca gccaaacgct caatcgcgct ggcgttgtgg tcgatgacgg
     8761 tgattgtcgc gccaatttgc ggcccaatcc tcggcggtta tatcagcgat aattaccact
     8821 ggggctggat attcttcatc aacgtgccaa ttggcgtggc ggtggtgttg atgacactgc
     8881 aaaccctgcg cggacgcgaa acccgcaccg aacggcggcg gattgatgcc gtggggctgg
     8941 cactgctggt tattggtatc ggtagcctgc agattatgct cgaccgcggt aaagagctgg
     9001 actggttttc atcacaggaa attatcattc ttaccgtggt ggcggtggtg gctatctgct
     9061 tcctgattgt ctgggagctg accgacgata acccgatagt cgatctgtcg ttgtttaagt
     9121 cgcgcaactt caccatcggc tgcttgtgta tcagcctcgc gtatatgctc tacttcggcg
     9181 cgattgttct gctgccgcag ttgttgcagg aggtctacgg ttacacggcg acctgggcag
     9241 gtttggcctc tgcgccggta gggattattc cggtgatcct gtcgccgatt atcggccgct
     9301 tcgcgcataa actggatatg cggcggctgg taaccttcag ctttattatg tatgccgtct
     9361 gcttctactg gcgtgcctat acctttgaac caggtatgga ttttggcgcg tcggcctggc
     9421 cgcagtttat ccaggggttt gcggtggcct gcttctttat gccgctgacc accattacgc
     9481 tgtctggttt gccaccggaa cgactggcgg cggcatcgag cctctctaac tttacgcgaa
     9541 cgctggcggg gtctatcggc acgtcgataa ccacgaccat gtggaccaac cgcgagtcga
     9601 tgcaccatgc gcagttgact gagtcggtaa acccgttcaa cccgaatgcc caggcgatgt
     9661 acagtcaact ggaagggctt gggatgacgc aacagcaggc atcaggctgg attgcccagc
     9721 agatcactaa tcaggggctg attatttccg ccaatgagat cttctggatg tcagccggga
     9781 tattcctcgt cctgctgggg ctggtgtggt ttgctaaacc gccctttggc gcaggtggcg
     9841 gcggaggtgg tgcgcactaa gtacaactaa gccagttcat ttgaactggc ttttttcaat
     9901 taattgtgaa gatagtttac tgactaaatg tgcagttcct gcaacttctc tttcggcagt
     9961 gccagttctt cgttgctgtt gatgcgtacg tcacgttcca gaatgctacg cgcaatatcc
    10021 tgcgcttcct gcaacgagtg catctggtaa gtgccacact ggtagacgtt cagctccggg
    10081 atctgattct gatcctgcac tttcagcacg tcttccattg ccgctttcca ggcatcagca
    10141 acacgctgct catctggcgt accaatcaga ctcatataaa aaccggtgcg gcagcccatt
    10201 ggcgagatat cgataatctc tacaccatta ccgttaagat ggttacgcat aaaaccagca
    10261 aacaggtgct ccagagtatg gctccctctt tctggcatca cttctttgtt cggcacgcag
    10321 aagcgcagat cgaacacggt gattgcgtcg ccatgcgggg tgttcattgt tttcgccacc
    10381 cgaactgcag gcgcttccat ccgggtatga tcgactgtga agctatctaa caacggcatt
    10441 tagccacctc cggtaatttt tttaaaaatt ttctgaactc tttcttccca ggcgagtctg
    10501 agtatatgaa agacgcgcat ttgttatcat catccctgaa ttcagagatg aaattttggc
    10561 cactcacgag tggccttttt cttttctgtc aggcgtgttt ttccagccac accgcaaacg
    10621 gttcggtatc agcggtttcc atttcctgct gacggcgttc agatgcctcg cgctcggcta
    10681 caaaatcctc ttcgcgcaga atttccaacg gctcttcacg cagcagatta cggtaggctt
    10741 ctgcaaacgc tttgcctgtt ccgccaatac cagtatcaat catagacctt aagatacggg
    10801 cagagaaagt cagatcggga ttatcgaagc aggcgaccag ttcatcacac actttctgat
    10861 acgctttgcc gccgttaatg ctatccaacg tttgcgcgac gcgtttcaga tcgcggaaca
    10921 gatctttacc cacctgcggt aacgggaact gcgcggtttc gcagccgata cccagcgtca
    10981 ggcccggttt gcgaccttcg aggatcaccc ggttccagtt aacgcgtgta caggcaagtt
    11041 cgctactgct catttccggt gcatcagcca gcgcacacca gaccataaac aggtcgagga
    11101 atcgcacctg ctgttcatct acaccaatcg gcgagaacgg gttgatgtcc agcgaacgca
    11161 cttcaatata ttcaatgccg ccacgtaaca gcgcatcaga aggtgactcg ccgctgcggg
    11221 taacgcgttt tggacgaatc ggcgcataca gttcgttttc aatctgcagc acgttgctat
    11281 tgatttgcag cctcttaccg tctttctcaa taccaatctt cgcgtactct tccgatggcg
    11341 ttttgattgc ctgtttaagg cccgctacgt actcgtaaag atcgttgaag gtaataccaa
    11401 gattgctttg cgatttattg gtatagccga gatcgctcaa acgaagagag gtcgcatacg
    11461 gcaggtaata cataccgcac tcggttttct caaacggcag cgacgttggt tttccttgca
    11521 ggaaagaaga acaaatcgcc ggagatgcac caaacagata aggaatgacc caaccgaaac
    11581 gatagtaatt gcggataacg cggaaatagc ccgcagaaat tttctctttg gcatcagtgc
    11641 ccgagatatc acagcacttc gcttgccaga atgccattgg caaagagaaa ttgtagtgca
    11701 cgccggaaat ggtttgcatc agcgcgccgt agcgattttt cagcccttca cgatacagcg
    11761 ttttaaagcg tccggtgtta gaagtgccgt actgtgccag ttcgatgtcc tgaccttctg
    11821 cgatgtagca tggcatactt aacggccaca tccgctcatc gcccatattg cgcgccgtat
    11881 aacgatgcag atcgcgcata aaggtcaaca tatgttcaat atcaccatcc actggtgtaa
    11941 tgaattccag caatgcttcc gcaaaatcgg tagtaatcca tttgtgcgtc agtgcggaac
    12001 ctaatgcttc aggatgacct gttgttgcct gtgtgccatc agcattaaca cgcaaagttt
    12061 cgcgctccag cccacgctgt atccccttta acgcctgagg atgtttttcc agccaggcca
    12121 gcgcctgtga tacgtccggg atcaaattga cctcccgcct gtcaaaatcg ttttaattag
    12181 cataactgta atggtgacca tatgtgcagg cctacaatta gtgccaccac atcatgccct
    12241 gaacggtagc tgctgcaact gcaacatagc gtaaagcttt accaaggcac aaaaaaaaga
    12301 ttaccggtcc ccacgagatg cgcatccatc ccgctaacag acacagtaaa tcgccaacca
    12361 cgggcatcca gcttaataat agcgtgactg caccatagcg tttcagccag ccagtagctt
    12421 tctcttgcca gcgcgatgtt ttacgcaatg gaaagaaacg cccaaggata acgttagtta
    12481 accctccaag gctattaccc attgttgctg ttaaaactaa aacccaggga taactgatcc
    12541 cggaaagcaa cattgccacc agcacgactt cggagttgcc gggtaatagt gtagcgctga
    12601 gaaaactact ggcaaacaac gagaaaagcg ataacgcttc actcacagca agcgaacatc
    12661 cacggcgtcc atgcctgctg cacgggccgc ctgaataccg aaatcggcat cttcaaagac
    12721 cacacactgc gtcggttgca cgcccatacg ctgcgcgcac aacaaaaatg tgtctggcgc
    12781 gggtttatgg tgtttgacgt gatcagcagc gacgacggcg tcaaaataac ggcgtaatcc
    12841 caggtgcgcc agcaatgcct cagcgatggc gctttcactc cccgttccta cagccattgg
    12901 gcgacgacca tgccaacttt tcaccacttc aacaagagga agcggctcga cactatccag
    12961 cagcatactt cttactgctt ctgttttttc acgcgctaac gcatgcgggg cgagatcggc
    13021 ctgattcagc tcaataattg cctgagcaat acgccaggtg ggcgatccat taagcgcaat
    13081 cattgcctga acatcgtact gaagaccgta gtgccctaat acttcgcgcc acgctttacg
    13141 gtgcgtaggc tccgtatcca ggaatatcaa aaattaaacc tgcataacgc tcgtacatgg
    13201 tcttctcgca agtcgaaaaa tatgacgcta ctttagcgta attgcttgat tttgtcgctg
    13261 atggcgaagg agaagaaaat tcaggaaatg gataaagtag ttatttagaa atgagatatt
    13321 tttgaaggaa atttttggga gaagatggtg catccgggag gattcgaacc tccgaccgct
    13381 cggttcgtag ccgagtactc tatccagctg agctacggat gcatcgggaa aatttatttt
    13441 actgctgata ttgatatcgc tactaaagcc atatcaagta agagatggtg catccgggag
    13501 gattactcgc cttgcggctc gcccttcggg ccgttgctaa agcaacgtta tcatccctgg
    13561 tgcctgcggt taattccgct acctcttcga taccttcatt gctgaagatt tcggagaata
    13621 tggtgcatcc gggaggattc gaacctccga ccgctcggtt cgtagccgag tactctatcc
    13681 agctgagcta cggatgcatc gggaaactta ctttactgca gattttttga taccgctact
    13741 aaagccgtat caagtaagag atggtgcatt cgggaggatt actcgccttg cggctcgccc
    13801 ttctggccgt tgctaaagca acgttatcct ccctggtgcc tgcggttata ccgccacctc
    13861 ttccatacct tcatcgctga aagtacgtag aatatggtgc atccgggagg attcgaacct
    13921 ccgaccgctc ggttcgtagc cgagtactct atccagctga gctacggatg caaatggcgg
    13981 tgaggcgggg attcgaaccc cggatgcagc ttttgaccgc atactccctt agcaggggag
    14041 cgccttcagc ctctcggcca cctcaccaca cgcctcttac gagtgcttcg aagaacttgt
    14101 ttatcgctca tcgtcgctgc gtggcgcaca tattactttc tgagacttat aagtcaaaca
    14161 atttttccca cacttttatc gtttgcacac ttcacgctca attagtctgt aaaaacgtca
    14221 aaaagagtgt tttatctaca gaaaaacgga ggtctggcag atagcagtaa tgcaaaaaaa
    14281 tggagactta agttgaatga acgggagtaa agcgaaaaga ctatagagtg aaggagaaat
    14341 tttgagggtg cgtctcaccg ataaagatga gacgcggaaa gattagtaac tggactgctg
    14401 ggatttttca gcctggatac gctggtagat ctcttcacgg tgaacagaaa cttccttcgg
    14461 ggcatttacg ccaatacgta cctggttgcc cttcacccct aaaactgtca cggtgacctc
    14521 atccccaatc atgagggtct caccaactcg acgagtcaga atcagcattc tttgctcctt
    14581 gaaagattaa aagagtcggg tctctctgta tcccggcatt atccatcata taacgccaaa
    14641 aagtaagcaa tgacaaacac attacatgta agcagtcatg gcattacatt ctgttaaacc
    14701 taagtttagc cgatatacac aacttcaacc tgactttatc gttgtcgata gcgttaatgc
    14761 gaatgccgtg aagcgagtcc acggcattgc ctgacgctta tattattgca atttcgcgct
    14821 gacccagcct ttcacactgg ctaacgctgc aggtaaggcc gcagcatccg taccaccggc
    14881 ttgcgccatg tcaggacgtc caccaccctt gccgcccacc tgctgagcga ccataccaat
    14941 cagttcccct gctttcacac gatctgtgac gtccttagat acgcctgcaa tcagagaaac
    15001 cttaccttcg gctaccgttg ccagcacgat aattgtcgac cccagctgat tttttaaatc
    15061 gtcaaccatg gtacgcaaca ttttcggctc aacaccgcta agctcgctaa ccaacagctt
    15121 aacaccatta acatcaattg ccttactgga aagatttgcg ctctcctgtg cggcagcttg
    15181 ttctttaagc tgttgtagtt ctttttctaa ctgacgcgta cgttccagta ctgagcgcac
    15241 tttatccgcc agattattgc tatcgccttt cagcagatgc gcgacttcgc ttaagcgatc
    15301 gctgtctgca tgaacggtgg tgatagcgcc ttctccggtt accgcttcga tacgacgaac
    15361 gcctgcagca gtacccgatt cagagatgat gcggaacaga ccaatatcac cagtgcggct
    15421 ggcgtgagta ccgccacaca gctcggtgga gaaatcgccc atgctcagca cgcgtacacg
    15481 ctcatcatac ttctcgccga acagcgccat cgcacctttc gctttcgccg cttcgagatc
    15541 catgatgttg gtttcgatcg gcaaattgcg acgaatctgt gcgttcacca ggtcttcgac
    15601 cgcacgaatc tcttccggtt tcatcgcttc gttgtgtgag aagtcgaagc gcagcacctt
    15661 gtcgttaacc agtgaacctt tctgcgatac atgagtcccc agaacctggc gcagcgcagc
    15721 gtgcatcagg tgcgttgcgg agtgattcag acgaatacgg gcgcgacgag cctcatcaac
    15781 atcagcctgc acagcgtcgc ccactttcag agaacccgca gcaagtttac cgatgtgacc
    15841 aatcgcctgg ccgtatttct gcgtatcttc caccgcgaag gagaagttag cgtctttcag
    15901 ttcgccttta tcaccaacct gaccgccgga ttccgcatag aatggtgttt gatctagcac
    15961 gaccacagct tcctggcctg cattgatggc atcaaccgct ttaccatcaa caaacagcgc
    16021 ggtcactttg ccgttcagtt ccagatggtc atagccttta aattcagatg cactatcaac
    16081 acggatcatt gcgttgtaat cggcaccaaa gccgctggct tcgcgcgcgc gacgacgctg
    16141 ctcttccatt gctgcttcaa aaccagcttc gtcaactttg atgttgcgct cacgacaaac
    16201 atcagccgtc aggtcaaccg ggaagccata ggtgtcgtac agacggaaag ccgtttcacc
    16261 atccagcgta tcaccagaaa gttttgccag ctcttcatcc agcaacgcca gaccgcgctc
    16321 cagagtacgg gcaaactgct cttcttcagt cttcagcacc tgctcaacct gcgcctgctg
    16381 gcgtttcagg tcttcacccg cagagcccat aacgtcgatc agcggaccaa ccagtttgta
    16441 gaagaaggtt tctttcgcgc cgagcatatt gccgtgacgc actgcgcgac gaatgatacg
    16501 acgcagtaca taaccacggt tttcattgga cggcattacg ccatccgcga tcaggaacgc
    16561 acaagaacga atgtggtcag cgattacgcg cagcgattta ttgctcagat cggtcgcgcc
    16621 agtgactttc gctaccgcct ggatcaacgt gcggaacagg tcgatgtcat agttagagtt
    16681 aacgtgttgc agcaccgcag caatacgctc cagacccata ccggtatcta cagacggctt
    16741 cggcagcggt tccatcgtgc catctgcctg gcggttgaac tgcatgaaga cgatgttcca
    16801 gatctcaatg tagcggtcgc cgtcttcttc cggacttccc ggagggccac cccaaatgtg
    16861 gtcgccgtga tcgtagaaga tttcggtgca cgggccgcac ggaccagtgt cacccatctg
    16921 ccagaagttg tcagatgcgt atggcgcacc tttgttatcg ccgatgcgaa taatacgttc
    16981 gcgcgggatc ccgacttctt tttcccagat ttcgtaggct tcgtcgtcgc tttcatagac
    17041 ggtaacccac agacgctctt tcggcagggc aaaccatttt tcgctggtca gcagttccca
    17101 tgcaaactga atggcatcgt gtttgaaata gtcgccgaag ctgaagttgc ccagcatttc
    17161 gaagaaggta tggtgacgcg cggtgtaacc gacgttttcc aggtcgttgt gtttaccacc
    17221 cgcacgcacg cagcgttggg aagtggtagc gcgggaataa ttacgcttgt cgagcccaag
    17281 gaacacatcc ttgaactgat tcatcccggc gttggtaaac aacaaagttg ggtcgttatg
    17341 gggtaccagg gagctgctgg caactacctg atgtccctta ctatggaaaa agtcgagaaa
    17401 cgcctgacgg atctcagcgg tgctcttgct cataattatc ctgaaatcaa gctaacgaaa
    17461 tatcgctacc agctccagcg tgtcttaacc gccgggctgg taactgaaaa gtgggaataa
    17521 gataagtttt cttgactggg aagtaaaata ccgtatgcgt tcagtcggca aaatttcgcc
    17581 aaatatcctg gatatcttcc atcagatagc cacgatagag cagaaaacgc tggatcttaa
    17641 ctttttctga aaagacagtt ggcaaaggtt catcatattt tcgcgtcgcc tgatcgcgcg
    17701 ccagtgcgca ccagtcgatg tcacattcac gcatcgcttt ttctgtcgct tcgcgggaaa
    17761 tacctttctg attcagttcc tgacgaatac gtgcaggtcc ataacctttg cggctacggc
    17821 tggcgataaa gcgcgcaaca aatcggctgt catcgagata gccatgttca tggcaccatg
    17881 caataacgcg ctcgtaatct tctgccgtag catcaatctc ttctgggcca tttttgccca
    17941 taatcggtgc cgcgagttta cgtcgcagtt cttgctcact gtgatcgcgc accgccagaa
    18001 tgcgtaccgc acgatccaac aggcgagcat atgccgggcg acgggacgtt gattctgtca
    18061 tggcatatcc ttacaactta aaaaagcaaa agggccgcag atgcgaccca ggttttgctg
    18121 ataaacagat ttaatagtca atgagtgtgc agaatgttcc cgcaggccca attcgttaga
    18181 ggatcgaggt gagagtaatt tttcacgcca gtgctggcct gttcccctca ccctaaccct
    18241 ctccccaaag gggcgagggg accgtccgtg cacacattat ctattatcat caataacgaa
    18301 cgattaaaaa tcttcgttag tttctgctac gccttcgctg tcatctacag agaaatccgg
    18361 cgttgagttc gggttgctca gcagcaactc acgtactttc ttctcgatct ctttcgcggt
    18421 ttccgggtta tctttcagcc aggcagttgc attcgcttta ccctgaccga tcttctcacc
    18481 tttgtagctg taccacgcgc ctgctttctc gatcagcttc tcttttacgc ccaggtcaac
    18541 cagttcgccg tagaagttga taccttcgcc gtagaggatc tgaaattcag cctgtttaaa
    18601 cggtgcagcg attttgttct tcaccacttt cacgcgggtt tcgctaccca ccacgttttc
    18661 gccctctttc accgcgccga tacgacggat gtcgagacga acagaggcgt agaatttcag
    18721 cgcgttacca ccggtagtgg tttccgggtt accgaacatc acaccaattt tcatacggat
    18781 ctggttgatg aagatcagca gcgtgttgga ctgcttcagg ttacccgcca gcttacgcat
    18841 cgcctggctc atcatacgtg ccgcaaggcc catgtgagag tcgccgattt cgccttcgat
    18901 ttccgctttc ggcgtcagtg ccgccacgga gtcaacgacg ataacgtcta ctgcaccaga
    18961 acgcgccagg gcgtcacaga tttccagtgc ctgctcgccg gtgtccggct gggagcacag
    19021 caggttgtcg atatcgacgc ccagtttacg tgcgtagatt gggtccagcg cgtgttcagc
    19081 atcgataaac gcacaggttt taccttcacg ctgcgctgcg gcgatcacct gcagcgtcag
    19141 cgtggtttta ccggaagatt ccggtccgta gatttcgacg atacggccca tcggcagacc
    19201 acctgcccca agcgcgatat ccagtgaaag cgaaccggta gagatggttt ccacatccat
    19261 ggaacggtct tcacccaggc gcatgatgga gcctttacca aattgtttct caatctggcc
    19321 cagtgctgcc gccaacgctt tctgtttgtt ttcgtcgata gccattttta ctcctgtcat
    19381 gccgggtaat accggatagt caatatgttc tgttgaagta attatactgt atgttcatac
    19441 agtatcaagt gttttgtaga aattgttgcc acaaggtctg caatgcatac gcagtagcct
    19501 gacgacgcac cgcatcacgg tcgccgctga agcattcccg ccgggtaatg ccttcaccgc
    19561 gggcagtggc aaaagcaaac cagacggtgc cgacaggctt ctcttcactg ccgccatccg
    19621 gcccggcgat accactaata gacacggcat aatcagcacg agccgctttc agtgcgccta
    19681 tcaccatttc caccacgacg ggttcactca ccgcgccatg ctgcgccagc gtctcttcgc
    19741 gtacgccgat catctgcgct ttggcttcgt tactgtaggt gacaaatccg cgttcaaacc
    19801 aggcggagct accggcaata tcggtaatca ctttcgctac ccaaccaccg gtacaagact
    19861 cggcagttgt tacggttgcg ccacgggctt tcagcgcctg cccaacctgt tcacttaact
    19921 gcatcagttc actgtcagtc atcacaacct ctgtcagtca aaaatttatg ccggacaaga
    19981 tagcactttc gtcaggaaga tggtgttggc gttgcaattt tacgaggagg attcagaaaa
    20041 aagctgatta gccagaggga agctcacgcc cccctcttgc aaatagttac tgcacgcgcg
    20101 ccagcgccac ggcttgtcct aactgccaga ccgccattgc gtaatgggtg ctgtggttat
    20161 aacgggtaat ggtgtagaag ttcggcagac cgtaccagta ctggtaaccg gtaccgacat
    20221 ccagacgcag caggctggct tgttgatggt tgcccagcgg ctgctgtggc gttaaacctg
    20281 ccgtggcaag ctgcgaaatg ctgtacctgg ttttgaagcc atttggcaag cctggagcct
    20341 gaccgtttgc cattaccgcg acctgatcgc ctttcaccca gccgtgcgct ttgaaatagt
    20401 tcgccacgct accgatcgca tcaaccggat cccacaggtt gatatgcccg tcgccgctga
    20461 aatctaccgc atattgtttg taagacgacg gcataaactg tccgtagccc atcgccccgg
    20521 caaaggaacc tttcagattg agcggatcgt cctgctcgtc gcgcgccatc agcaggaagg
    20581 tttccagctc gccagagaaa tactccgcgc ggcgtgggta gttaaatgac agcgttgcca
    20641 gcgcatcgag gatgcgagtt ttccccatca cgcgccccca gcgggtttca acgccgataa
    20701 tcccgacgat aatttccggc ggtacgccat acacctgcca cgcgcgattc aacgcatctt
    20761 catactgatt ccagaaaacc acaccgttct gcacgttgtc cggcgtaata aattttttgc
    20821 gataacgcag ccatgcgccg ttcggacctg atggcggttt caccgatgtg gttggtgcct
    20881 ggttatccat cagccgcagt accgaatcca gacgcttcgc ctgggagaga atttcctgca
    20941 actgctgacg atcgaaaccg tgtttgttca ccattttgtc gatgaactgc tgggcattcg
    21001 ggttattagc gaaatcgccg cccatctgca tcacattgtg ctgcggctca agcaggaagc
    21061 cgccagacgg cgttccggtg gtcgtttcag tctcagtagg ttttggcttg ctgctacagg
    21121 cggcaagcaa cacaaaaagg ggaagcaatg ttacataacg acgcttgaac atgaggggtc
    21181 catttaacag attcaaccag gggcaagtat ggtaaagcat cacgccccgc acaaggaagc
    21241 ggtagtcact gcccgatacg gactttacat aactcaactc attcccctcg ctatcctttt
    21301 actcaaactt ccaaattaaa atatttatct ttcattttta gattaaaata acacttttaa
    21361 atctttcaat ctgattagat taggttgccg tttggtaata aaacaataaa tcctgaagga
    21421 gagaacaatg atagaaacca ttactcatgg tgcagagtgg tttatcgggc tgttccaaaa
    21481 gggcggagag gtgtttaccg ggatggtgac cggcattctt ccgctgttga ttagcctgct
    21541 ggttatcatg aacgcactga ttaattttat cggtcagcat cgtattgaac gttttgctca
    21601 acgttgcgcc ggtaaccctg tttcccgtta cctgctgcta ccgtgcattg gcacgtttgt
    21661 cttttgcaat ccgatgacct taagccaggg tcgctttatg ccggaaaagt acaaacccag
    21721 ctactacgcg gcggcctctt atagctgcca ctcaatgaat ggcctctttc cccatatcaa
    21781 ccctggcgaa ctgtttgttt atcttggcat tgccagcggt ctgacaacgc tgaacctgcc
    21841 acttggccca ctggcggtga gctatctgct ggttggtctg gtcaccaact tctttcgcgg
    21901 ctgggtgacc gatctgacca ccgccatttt tgagaaaaag atgggcattc aacttgaaca
    21961 aaaagttcac ctggcaggag caacatcatg acgcgtattc ggatcgaaaa aggaacgggt
    22021 ggctggggcg gcccgcttga gctggaagcc acgccgggca aaaaaatcgt ctatatcacc
    22081 accggtaccc ggcctgcgat tgttgacaaa ctggcacaac ttactggctg gcaggctatt
    22141 gacggattta aagaaggtga acccgcggag gcggaaattg gtgtcgcggt aatcgactgt
    22201 ggcggcacat tacgctgcgg catctatccg aaacgacgta ttcccaccat taatatccac
    22261 tcgacgggca agtccggtcc gctggcgcag tacattgtgg aagatattta tgtctctggc
    22321 gtaaaagaag aaaacatcac tgtagtgggt gatgcgacac cacaaccctc ttccgtgggc
    22381 cgtgactatg acaccagtaa gaaaatcacc gaacaaagcg atggtttact ggcgaaggtg
    22441 ggaatgggca tggggtccgc cgttgcggtg ctgtttcaat ctggtcgtga caccatcgac
    22501 actgtattaa aaaccattct gccgtttatg gcattcgtct cggcgctcat tggcatcatt
    22561 atggcttctg gccttggtga ctggattgcc cacggtcttg ctccgctggc gagccatcca
    22621 ctgggtctgg tcatgctggc gctcatctgc tccttcccac tgctttcacc tttcctcggc
    22681 ccaggcgcag ttatcgcaca ggttatcggc gtattgattg gcgtgcagat tggtctcggc
    22741 aatattccgc cgcatctggc tttaccggca ctgtttgcca tcaacgcgca ggcggcctgc
    22801 gacttcatcc cggtcggttt gtcgctggcg gaagcccgtc aggacacggt tcgcgtcggt
    22861 gtcccttctg tactggtgag ccgcttttta accggcgcac cgactgtact gatcgcctgg
    22921 tttgtctccg gttttatcta tcaatagagg ctgaaacatg accgttattt ataagaccac
    22981 catcacccgt atcggcgcga gtgccactga cgccctcagc gaccagatgc tcatcacctt
    23041 tcgtgaaggc gcgccagcgg acctcgaaga gtattgcttc attcattgcc acggcgagtt
    23101 gaaaggtgca ctccatcccg gtttgcaatt tacgctcggg cagcatcgct atccggtgac
    23161 cgctgttggc agcgtggcgg aagacaacct tcgcgaactg ggtcatgtca ccctgcgctt
    23221 cgatggttta aacgaagcgg aatttccggg cactgtccat gtggcaggcc ctgtacccga
    23281 cgatatcgcg ccgggatcgg ttttgaagtt tgaatctgtt aaggagtaaa aaatgaatca
    23341 ggttgccgtt gtcatcggtg gtgggcaaac cttaggcgcg ttcctgtgcc acggtctggt
    23401 tgccgagggg tatcgcgtcg cggttgtcga tattcagagc gacaaagccg caaatgtggc
    23461 acaagaaatt aacgccgaat atggtgaaag tatggcgtac ggttttggtg ctgacgccac
    23521 tagcgagcaa agcgttctgg cgctctctcg tggggtagat gaaatctttg gtcgcgtgga
    23581 tttgctggtc tatagcgccg gaatagcaaa agcagccttt atcagcgact tccagctcgg
    23641 cgattttgac cgttcgctac aagtgaatct ggtgggttat ttcctgtgtg cccgtgaatt
    23701 ttcgcgtttg atgatccgcg acgggattca gggtcgcatt attcagatca actcgaaatc
    23761 cggcaaagtg ggcagcaaac acaactctgg ctacagcgca gcgaaatttg gtggcgtcgg
    23821 gctgactcaa tcactggcgc tggatctggt ggagtacggc attacggtgc attcactgat
    23881 gctcggtaac ctgctgaaat cgccgatgtt ccagtcactg ttgccacaat acgcgaccaa
    23941 gctgggtatc aaaccggatc aagtcgagca gtattacatt gacaaagtac cgctcaaacg
    24001 cggctgcgat tatcaagatg tgctgaatat gctgctgttc tacgccagtc ctaaggcgtc
    24061 gtactgcacc ggacagtcga tcaatgtcac cggcggtcag gtgatgttct gatcaacagc
    24121 ggagatccat taaggatctc cgtgagacta tagaatgcct gatgcgctac gctcatcagg
    24181 catacaggac ttccgccact acattaagga aaagttatgg tatccgcact catcaccgtc
    24241 gccgttatcg cctggtgtgc gcaactggcc ttaggcggct ggcaaatttc tcgttttaac
    24301 cgtgccttcg acacactatg ccagcaaggg cgggttggcg tgggtcgttc cagcgggcgc
    24361 tttaaaccgc gggtcgtggt cgccatcggc tggacgatca gcagcgcatc gtcgacacct
    24421 tgtttatgaa aggactgacc gtcttcgccc gaccgcaaaa aattcccgca attaccggta
    24481 tgcatgcggg tgatttacag cccgatgtga tctttcccca tgatccacta tcacagaatg
    24541 ctctatcatt ggcgcttaaa ctgaaacgtg gataatttcg ttgtgaatgt tacttgcttg
    24601 cgaagttatc attttgaaac ctaaatcagg taatcacgcc catgaaacct cgtcagcgtc
    24661 aggccgccat tctggagtat ctgcaaaagc agggtaaatg ctcggttgaa gaattggcgc
    24721 aatactttga caccacaggc acaaccattc gcaaagatct ggtcattctg gaacatgccg
    24781 gaaccgtcat tcgtacttat ggcggagtgg tgttgaataa agaggaatcc gagccgccta
    24841 tcgatcataa aacactcatc aacacccaca agaaagagct gattgcagaa gctgccgtta
    24901 gttttatcca tgatggcgat tcgatcattc ttgatgctgg cagtaccgtt ttgcagatgg
    24961 ttcccctgct ctcgcgcttt aataacatca cggtgatgac caacagcctg catatcgtca
    25021 atgcgctatc cgaactggat aacgaacaaa ctatcctgat gccaggcgga acgtttcgta
    25081 aaaaattggc ctcatttcac ggacagctgg cagagaatgc cttcgaacat ttcagtttcg
    25141 ataaattgtt tatgggcacc gacggcatcg atctcaatgc gggcgtaacc accttcaacg
    25201 aggtttatac cgtcagtaag gcaatgtgca atgccgcgcg cgaagtgatt ttgatggcgg
    25261 actcatcaaa gtttggccgt aaaagcccca acgtagtttg cagtcttgaa agcgtcgata
    25321 agctgattac cgacgcaggt atcgatccgg cgtttcgtca ggcgctggaa gagaaaggga
    25381 tcgatgtgat cataaccgga gagagcaatg agtgaagcac tactgaacgc gggacgtcag
    25441 acgttaatgc tggagttgca ggaagcaagc cgtttaccgg aacgtctggg cgatgatttt
    25501 gttcgcgccg ccaatatcat cctgcactgc gaaggcaaag tggtggtttc gggaattggc
    25561 aaatcgggcc acattggtaa gaaaatcgcc gcaacacttg ccagtaccgg cacaccggct
    25621 ttttttgtcc atccggcaga agcactgcac ggcgatctgg ggatgattga aagccgcgat
    25681 gtgatgctgt ttatctctta ctccggtggc gcgaaggaac tggatctgat tattccgcgt
    25741 ctggaagata aatctatcgc gctgctggcg atgaccggca aaccgacgtc accgctgggc
    25801 ctggcggcaa aagcggtgct ggatatctcc gtagaacgcg aagcctgccc gatgcacctt
    25861 gcgccgacct ccagcaccgt caataccctg atgatgggtg acgcgctggc gatggcggtc
    25921 atgcaggcgc gcggatttaa tgaagaagat tttgcccgct cccacccagc cggggcactg
    25981 ggcgctcgct tgctgaataa agtgcatcat ctgatgcgcc gtgacgatgc catcccacag
    26041 gtggcgttaa ccgccagcgt gatggatgcg atgctggaac tcagccgcac cggtctgggg
    26101 ctggtggcgg tatgtgacgc tcaacaacag gtacaaggcg tctttaccga cggcgattta
    26161 cgtcgctggc tggtaggcgg cggcgcactc accacgccag ttaatgaagc gatgacgaca
    26221 ggcggcacca cgttacaggc gcaaagtcgc gccatcgacg ccaaagagat cctgatgaag
    26281 cgcaaaatca ctgccgcacc ggtggtggat gaaaacggca aactcaccgg cgcaattaac
    26341 ctgcaggatt tctatcaggc cgggattatt taatccttca ttcccagacg tttcgccagc
    26401 cgatgcaggt tggcgacgtc ggtttccagc atccgcgcgc aggcagccca gttatgatga
    26461 ttttgtgcca gtgcctggcg aatagtttca cgctggaacg cttctgtcgc ttcacgcagg
    26521 ttttgcttaa caacgggcac cgccgccgct tctggcggcg gcaacgtcac ctcaggaaaa
    26581 gcaaaatgtt gcgcctcaag aatcacttca tcgccgttgc gggtggctct cgccagcact
    26641 accgcccgat gaatagcatg ttccagttcg cgcacgttcc ccggaaaacg atagtgttgc
    26701 agtaaatttc gcgctccggc acttaatacc acgcgggaga gccccagccg caaacgacac
    26761 tgttcgcaga aataccccgc cagcagaatg acatcatcgc cccgctcacg cagcggcggc
    26821 accgaaagtg gaaacacgct caggcgatga aacaagtcag cgcgaaatcg ccctgccagc
    26881 acctcttcgc gtaagtcgcg gttagtcgcc gccagcacgc gcacatcgac ccgcaaacta
    26941 cggtcatcgc caacgcgctg aatatcgcca tactgcaaca ccctcagcag cttggcctgc
    27001 aatgccaacg acaactcgcc gatctcatcc agaaacagag tgccgttatc cgccatttca
    27061 aacttcccgc tgcggttact gatagcgcca gtaaacgctc ctttcacatg cccgaacaac
    27121 tcactttccg ccacactttc cggcagtgca gcacagttga gatagaccag cggattcacc
    27181 gcccgtggcg aggcttcatg aatcgctttc gccaccagct ccttaccggt tcccgtctca
    27241 ccgctgatca ggacgttgag atcggacgcc gccacaatct caatctcttt tttcagttgc
    27301 gtcatgccag gggacaagcc aatcatctgc gtctgtttca ccgcttcaaa cggcgtggca
    27361 tcgcctggca tcatattctg gctttccagt tgttcaatca gcaacgcatt gcttaacgct
    27421 cccgccgcca gcgcagcaat cagccgtagc tcttcgtcgc tgaaaacatc gaactgatcg
    27481 ggctgcatcc cgtcgagcgt cagtgcgccg atcaggtttt gcccggcaaa caatggcaga
    27541 ccaacgcagg cgtgaacctt cagactctcc tgcccaggaa tcaaaccgtc atagggatcg
    27601 ggcaattcgc tgtctgcggg aaagcgcacc acatccccgg cgcgggcaat cgcttccagc
    27661 cgtggatgcc cttccagcgc aaagcgtcta ccgagtacac cctttgccag accgtcgatg
    27721 gcaagcggaa taaactgccg cgaatcgtaa cgtagcaacg cagacgcatc gcactccagc
    27781 acctgacgta gcgtggtgat caggcgctga aaacgatcct gatgaccaat cccacgctgc
    27841 aattcgatgg cgatattcgc cagcacatca acggaaaaac tcatctttgc ctcactgtca
    27901 atttgactat agatattgtc atatcgacca tttgattgat agtcattttg actactcatt
    27961 aatgagcata attttattta tagagtaaaa acaatcagat aaaaaactgg cacgtaatct
    28021 gcaattagca agacatcttt ttagaacacg ctgaataaat tgaggttgct atgtctattg
    28081 tggtgaaaaa taacattcat tgggttggtc aacgtgactg ggaagtgcgt gattttcacg
    28141 gtacggaata taaaacgctg cgcggcagca gttacaacag ctacctcatc cgcgaagaaa
    28201 aaaacgtgct gatcgacacc gtcgaccata aattcagccg cgaatttgtg cagaacctgc
    28261 gtaatgaaat cgatctggcg gatatcgatt acatcgtgat taaccatgca gaagaggacc
    28321 acgctggggc gctgaccgaa ctgatggcgc aaattcccga tacgccgatt tactgtactg
    28381 ccaacgctat cgactcgata aatggtcatc accatcatcc ggagtggaat tttaatgtgg
    28441 tgaaaactgg tgacacgctg gatatcggca acggcaaaca gctcattttt gtcgaaacgc
    28501 caatgctgca ctggccggac agcatgatga cttacctgac aggcgacgcg gtgctgttca
    28561 gtaacgatgc tttcggtcag cactactgcg acgagcatct gttcaacgat gaagtggatc
    28621 agacggagct tttcgagcag tgccagcgtt actacgccaa tatcctgacg ccgttcagcc
    28681 gcctggtaac accgaaaatt accgagatcc tgggctttaa cttaccagtc gatatgatag
    28741 cgacctctca cggcgtggta tggcgcgata acccgacgca aattgtcgag ctgtacctga
    28801 aatgggcggc tgattatcag gaagacagaa tcaccatttt ctacgacacc atgtcgaata
    28861 acacccgcat gatggctgac gctatcgccc aggggattgc ggaaaccgac ccacgcgtgg
    28921 cggtgaaaat tttcaacgtc gcccgaagcg ataaaaacga aatcctgacc aatgtcttcc
    28981 gctcaaaagg cgtgctggtc ggcacttcga cgatgaataa cgtgatgatg ccgaaaatcg
    29041 ccgggctggt ggaggagatg actggtttac gcttccgtaa caaacgcgcc agtgctttcg
    29101 gctctcacgg ctggagcggc ggtgcggtgg atcgtctttc cacgcgcctg caggatgcgg
    29161 gtttcgaaat gtcgcttagc ctgaaagcga aatggcgacc agaccaggac gctctggagt
    29221 tatgccgtga acacggtcgc gaaatcgccc gtcagtgggc gctcgcgccg ctgccgcaga
    29281 gcacggtgaa taaggtagtc aaagaagaaa cctctgccac cacgacggct gacctcggcc
    29341 cacggatgca gtgcagcgtc tgccagtgga tttacgatcc ggcaaaaggc gagccaatgc
    29401 aggacgttgc gccaggaacg ccgtggagtg aagtcccgga taacttcctc tgcccggaat
    29461 gctccctcgg caaagacgtc tttgaagaac tggcatcgga ggcaaaatga gtaacggcat
    29521 tgtgatcatc ggttcgggct tcgccgcccg ccaactggtg aaaaatattc gcaaacagga
    29581 cgccactatt ccattaaccc tgattgccgc cgacagcatg gatgagtaca acaaacctga
    29641 cctcagccat gttatcagtc aggggcaacg tgccgatgac cttacccgcc agacggcggg
    29701 tgaatttgcc gagcagttta atctgcacct gtttccacaa acctgggtga cggatatcga
    29761 tgccgaagcc cgtgtggtga aaagccagaa taatcagtgg caatacgaca agctagtact
    29821 ggcaaccggt gccagtgcct ttgtcccgcc tgtgcctggg cgtgagttaa tgctgacgtt
    29881 aaatagtcag caagagtatc gcgcctgtga aacgcaactg cgggatgccc gacgcgtgtt
    29941 gattgttggc ggtggtttga ttggtagcga actggcgatg gatttttgtc gtgcaggcaa
    30001 agcggtcacg ctaatcgaca acgctgccag tattctggcg tcgttaatgc caccggaagt
    30061 aagcagccgc ttgcagcatc ggttgacgga gatgggcgtt catctgctgt tgaaatctca
    30121 gttacagggg ctggaaaaaa cggattctgg cattctggca acgctggacc accagcgtag
    30181 tatcgaagtg gatgcggtaa ttgccgccac cggactgcgc ccggaaacag ccctggcacg
    30241 acgcgccggg ctgacgatta atcgcggcgt ttgcgtcgat agttatctgc aaaccagtaa
    30301 tgacgatatt tatgcgctgg gcgattacgc ggaaatcaac ggtcaggtac tgccattcct
    30361 gcagccgatt caacttagcg cgatggtgct ggcaaaaaat cttctcggca ataacacgcc
    30421 gctgaaacta ccgacgatgc tggtgaaaat caaaacgccg gaattaccgc tgcatctggc
    30481 aggcgaaacc cagcgtcagg atttacgctg gcaaattaat accgaacgct agggaatggt
    30541 ggctcgcggt gttgacgatg ctgaccagct tcgcgccttt gtggtcagtg aggatcggat
    30601 gaaagaggca tttggattgt tgaaaacatt gccgatgtag gtgggctact gtgcctaaaa
    30661 tgtcggatgc gacgctagcg cgtcttatcc gacctacggg gacgcatgtg taggccggat
    30721 aaggcgttta cgccgcatcc ggcaatggtg tccaaatgca acacgtttta tccgttctgg
    30781 acttcacccg ctaaccaacg cgccgcagca ataaccccct gccccagaga caaaccgcca
    30841 tcacccgccg gtaaactctg tggaaagagc aatgtgaaat cagcgagata atgcgccaga
    30901 cgtgcacgca gcaaacggtt atgaataacc ccgccgctaa ataccagcgt agtgatacca
    30961 cgcatcgtgg cctgctcacg catcaacgcg gcaaaaccct gcgccagcgc atcatgaaac
    31021 gcccacgcgc gttgattaac ctgtgcctgc cagttcagcc actgctgcca gaaagcggcg
    31081 agatccagtt gattgtccac cagcggcatc gtcaccggat gcgtcactcc gtggcatgag
    31141 gctgcgagcg cctccagagc acaagccgct tcaccttcat aacttaacgt ggctggcgca
    31201 cagcccagtg ccgccgccac tgcatcgaac aaccgcccac acgatgacgc cagcggcgcg
    31261 ttaattccac gctcaatggc ccgcgccagc acgctccagt tttgctgttg cacacttgct
    31321 gtttcagggt aattctgcca ctccggcaca aagcgcaggc actgcgccag caggtttcgc
    31381 cacggctgct tcgctgccaa atcgccaccc ggaagcgcca ctgcaggcaa gccgcccagg
    31441 tgctcacatt cgcgatagtt cacccgcagg cactcgccgc cccacaaagc gccgttctcc
    31501 cccataccga taccgtcgag cgtcaaagca atgacatcac cgccatccag cggccactga
    31561 tgctctgcca gacacgccgc tgcatgggca tgatgatgca gtaccgtttg cgtcggcaga
    31621 ttcatttcac gcgcccactg gctggagaca tagcccggat gcgcgtcatg cacaacgtat
    31681 ttcggggtaa aatcgtagat gttttgcatc aggcgtaacg cttcgcgcca ctgcatctgg
    31741 atgccatcgt cacttaaatc gcccagatgc tgactcaaca ccgcttgttc accgcgcacc
    31801 aggcagaagg tatttttcag atccgctccg agacacagca caggcggaac atttttaaag
    31861 cccggaggca aagccagcgc atccggcaca tacccccgcg aacggcgcag catttcgccg
    31921 ctttcgcgca ccaccgaatc atccatccgc tgcacgatgt cgcggttatg tatcaagaat
    31981 ccgtcggcaa tgccctgcaa atccgccagc gcctgttcgt tgctgatagc tggtggttta
    32041 ccgctcaggt tgccggaggt catcaccagc gggcattgca gttcctgtaa cagcaaatgc
    32101 tggagcgggt tcgcaggcaa cattaccccg acttcgttaa ggtcaggggc gatatcatca
    32161 caaagctcag gaacgtattt tttatccacc agcacaatcg gcgcggcggg cgtggtaagc
    32221 aactggcgcg cagcgtctgg taaaccgtca gccactggca acatgaccgc cagcggtttc
    32281 gccgggcgat gtttgcgcgc ccgaagtgtc gccaccgcgt tactgttacg tgcatcgcag
    32341 gcaagatgaa atccgccaat ccctttgatg gcgacaatgt tgcccatttt taactgtgcg
    32401 atagccgcct gtaatgccgc ctcttgttct gcatgttcac catgacttac ccattcaaga
    32461 tgcgggccac actccgggca ggccaccggc tgggcgtgga agcgacgatc gagcgggtcg
    32521 cggtactctt tgtcacaagc cggacacaac ggaaacgccg ccatcacggt aaacgggcgg
    32581 tcgtaaggca tggcgcgaat aatggtgaaa cgcgggccgc agtgggtaca gttgataaac
    32641 ggataacgat aacgccgttc gcctggggta ttcatttcgg caaggcaagc agggcaagta
    32701 gcggcatccg ggacaatttg cgtattcatg gcacctcccg cgctctggcg gatggtgaac
    32761 tcagtgggca gttgtgacca gatgtacggc tcacgctcga cgctatcaat acgcgccagc
    32821 ggcgggcagt gctgatgcaa ttgaacaaga aacgtttccg ggtcttcccg cagccggact
    32881 tctacgccat cgccgtcatt acagacatcg ccgtgaagat ttaattgctg tgccagctgc
    32941 cagacaaacg gacgaaaacc gacgccctgc actttgccac gaatacgcag ttggacaccg
    33001 caagatgtgt tttttgccat tgagttattc ccgccatcat gaattgcgta acccgcccag
    33061 ccggacacga cagcgtcgca tccggcagtc acaggtcggc gataccgcct gctccgtatt
    33121 ctacgaatat ttccgggaat tcctttgatg ccagaacagt tctgtaagat ttttagaaca
    33181 tcagcgccgt acggcggcgt ttttctgcac tcagttgttc aagtttatta cgatcgacac
    33241 aaatcagcgc atgagtcggg caagccgcca tacacgccgg gccgtcttca cgatggttgc
    33301 acaggtcaca tttattggct tcggctttgt cagcccgtac attcagcccc gcgccgctgt
    33361 tgcgaatcac cggacgtacc accacttcca tcgcgccata cgggcaagcc acaacgcagg
    33421 ttttgcaacc aatgcaacgt tcctgcatca catgaacaaa ccctttatca cggctgatag
    33481 caccattcgg gcagacgtta gcgcacggtg catcttcaca ctgacggcaa actgtcgccg
    33541 tggaaatgtt cacaccttta atgacatgga tacgcggtaa aaatgtttcc ggggtcagcg
    33601 atgcacagtc ctgattttcc tgatgagaaa ccacgcacgc cacttcacag gtacggcaac
    33661 caatacattt actcgcgtca gcaatgatga aacggttcat caaattctcc agcaatgaca
    33721 gttaatgcgc cgatacattc acaaatcatg ccagttttta atttactgtt atttaaggaa
    33781 attaatttct gtaatgcagg aaaaaagatg tcatcgacac tagtgacgat gacatgtgat
    33841 gacaatgttt atcgcgaaag agcaatgagt gagtctcggt ggatcagttt tccgctgaag
    33901 gttttcggcg gtgagaaatc cccgccatcg agcataaaaa tcagccgtcc aataatttcc
    33961 tgaatcatct cagtcaccgg aatttttacg ctggagagcg ccggaacgat atagggggca
    34021 attgcgatat catcgaatcc gataactgac acctgctctg gcaccgctac gccgcgctcg
    34081 tgcaacgctt tcatcgcacc tatcgccata tcgtcgttac tggcaactaa cgcgctaaat
    34141 ttagccccac gttcgagcaa cgtttctacc ccttcggccc cgctggcggg cgtccattta
    34201 ccgttagcga taagtttttc attgagcgca ataccatgct gcgccagcgc gtctttatac
    34261 ccagcaagac gttcaatgct ggtgggggaa tccatcgagc cggtaaggaa agcaatctcc
    34321 tgatgtccgg cgtttatcaa ctctgccacg gcattaaagc tggtctgttt atgatcgcac
    34381 cagacgctat ggctgctgtt tttgcgcagg cggcgattaa gcaccattat cggctgactg
    34441 tgcgcgtcaa tgatgtcatc gatctcatcc acgcttaaaa aacgcgggta aatcataatg
    34501 gcgttgcagc gcaaatccag cagatactga atcgcctggc gctcttcttc ggcgctgtgt
    34561 ttaccatctg ccaatagcaa ctgccgccct ttctcttccg ccattcgcgc ggcatgaaag
    34621 agtaattcac taaaataaat gccgtggtaa agcgtgttgg tcactaccag ccccagcgtc
    34681 tgagtactct tcgccgacag attgcgcgcc agcaagtttg ggcggtaacc gctctcttct
    34741 accgcctgaa acacgcgatc tttagtctcc tggctgacgt agccattacc tgaaagcacg
    34801 cgggaaacgg tcgcttttga aaccccggcg cgcttcgcca cttccagcat cgtcgtcatc
    34861 attttcatcc ctttacacgc aatcaacgca gtgtactgca ccgtttgccg attgtccttg
    34921 cgcaatcggc gggaaaaata ttcaggtgac cggtttcaca aatataaaaa atgaataatt
    34981 aactctcttg cttatttagt gacaactatt catgattttg tgaaaccggt ttcctaattc
    35041 cgtttcagca tcggcatttt tccgttacgt cgactgataa caactacatc taccctactg
    35101 ataacaggat aaaatccgat ggccaaaaat tatgcggcgc tggcacgctc ggagatagcg
    35161 gcactgggcg gcgttgataa catctcggcg gtcacgcact gtatgacgcg tttgcgcttt
    35221 gttatcaaag atgaccagct tatcgacagc ccgacgttaa aaaccatccc cggcgtgctc
    35281 ggcgtggtac gtagtgacaa ccagtgtcag gtgattatcg gcaataccgt ttcacaagcc
    35341 tttcaggaag tcgtcagcct gctgccggga gatatgcagc ccgcacagcc cgtgggtaaa
    35401 cccaaactca cgccgcgtcg cattggtgcg gggatcctcg atgcgctgat cggcaccatg
    35461 tcaccgctga tcccggcgat tatcggcgga tcgatggtca aactgctggc gatgatcctc
    35521 gagatgagcg gcgtgctgac aaaaggatcg ccgaccttaa ccattctgaa tgtgattggt
    35581 gacggtgctt tcttcttcct gccgctgatg gtcgcggcat ctgccgacat caaatttaaa
    35641 accaatatgt cgctggcgat tgccatcgcg ggtgtgctgg tacatccgag ttttattgaa
    35701 ctgatggcga aagcggccca gggtgaacat gtcgaatttg ccctgattcc ggtcaccgcg
    35761 gtgaaataca cctacacagt gatcccggcg ctggtgatga cctggtgcct gtcatatatc
    35821 gaacgctggg tggatcgcat tacaccggcg gtgaccaaaa acttcctcaa gccaatgctg
    35881 attgtgttga ttgccgcacc gctggcaatc ctgctgattg gcccgattgg tatctggatc
    35941 ggtagcgcca tttcggcgct ggtttacagc attcatggtt atctgggctg gctttcagtc
    36001 gccattatgg gcgcgctgtg gcctctgctg gtaatgaccg ggatgcaccg cgtctttacg
    36061 ccaaccatca ttcagaccat tgccgaaacc ggcaaagaag ggatggtcat gccgtcagag
    36121 atcggcgcta acctgtcgct gggcggttca tcactggcgg tggcgtggaa aacgaaaaac
    36181 ccggaactgc gccagacggc gctggctgcg gcggcatcag ccattatggc ggggatttcc
    36241 gaaccggcgt tatacggcgt ggcgatccgc ctgaaacgtc cgcttatcgc cagtcttatc
    36301 agcggtttta tttgcggcgc ggttgccggt atggcggggc ttgccagcca ctcaatggca
    36361 gcgccggggc tatttaccag cgtgcaattc ttcgatccgg cgaatccaat gagcatcgtc
    36421 tgggtgttcg cggtcatggc gctggcggtg gtgctgtcgt ttatcctcac actgttgctc
    36481 ggctttgagg atattcctgt tgaggaagcg gctgcccagg cgcgaaagca tcagagcgta
    36541 caaccgaccg tcgccaaaga agtaagtctt aattgaggat gaaaatgtca gtatttccag
    36601 aaggtttttt atggggcggc gcgcttgccg ccaaccagtc tgaaggtgcg ttccgtgaag
    36661 gcggaaaagg gctgaccacc gtcgatatga tcccacacgg cgagcatcga atggcggtga
    36721 aactggggct ggaaaaacgt tttcagttgc gcgatgacga gttttatccc agccatgagg
    36781 cgacggattt ttatcatcgt tataaagaag atatcgccct gatggcagag atgggattca
    36841 aggttttccg tacctcaatt gcctggagcc gtctctttcc gcagggcgat gaaatcacgc
    36901 ccaatcagca gggcattgct ttttatcgtt ctgtctttga agagtgtaaa aagtacggta
    36961 tcgaaccgct ggtcacgttg tgccacttcg atgtgccgat gcatctggtc accgaatatg
    37021 gctcctggcg taaccgcaag ctggtggagt ttttcagccg ctacgccaga acctgctttg
    37081 aagcatttga tggtctggtg aaatactggc taaccttcaa tgaaatcaac attatgttgc
    37141 atagcccgtt ctccggcgcg ggtctggtgt ttgaagaagg tgaaaatcag gatcaggtga
    37201 aatatcaggc cgcgcatcac cagctggttg ccagtgcgct agccgccaaa atcgcccatg
    37261 aggttaaccc gcaaaatcag gtgggctgta tgctggcggg cggcaacttc tacccttaca
    37321 gctgcaaacc ggaagatgtc tgggcggcgc tggagaaaga tcgggaaaac ctgtttttta
    37381 tcgatgtgca ggcgcgcggc gcgtatccgg cttactctgc ccgcgtattt cgcgaaaaag
    37441 gggtaaccat agataaagcg ctgggcgatg atgagatcct gaaaaacacc gtcgattttg
    37501 tctctttcag ctattacgcc tcgcgctgcg cctcggcgga gatgaacgcc aacaacagca
    37561 gtgcggcgaa cgtggtgaaa tcgctgcgta acccgtatct gcaagtgagc gactggggct
    37621 ggggaattga tccactcggt ctgcgtatca ccatgaatat gatgtacgat cgttatcaga
    37681 agccgctgtt tctggtggaa aacggcctcg gcgcaaaaga tgaacttgct gccaatggcg
    37741 agattaacga tgactatcgc atcagctatt tacgcgaaca tatccgcgca atgggcgaag
    37801 cgattgcaga tggcattccg ctgatgggct acaccacatg gggctgtatt gatttagttt
    37861 ccgcctctac gggtgaaatg agcaaacgct acggttttgt ctacgtagac cgtgacgacg
    37921 caggcaacgg cacgctgacg cgcacacgta agaaatcgtt ctggtggtat aaaaaagtga
    37981 ttgccagtaa tggggaagat ttagagtaag taacagtgcc ggatgcggcg tgaacgcctt
    38041 atccggccta catgtcgcac gaaccaggaa ggcccgataa gcgcagcgca tcgggcaatt
    38101 tagcatttgg catcagagct ggttcacccc atcaagaaca tccctgtcct gattccttaa
    38161 tgaaaaacta ctcttcttcc accgctaact gcgcgaagcc gccattccct tcccagcctt
    38221 ccagtcgttg ataaacggtt tctaccgcat ctttaatcgg ctgggtcatc gggtagtaaa
    38281 agccgacgat atccggctgt atgccgagga aaatcacttc gccaatatct tctttcaact
    38341 ggtcgataag atagttcaga ggcatgttat gggtagtcat cataaacatc tcggcgatat
    38401 catccgggtc gatgatgcgg atctcgccgg ggtttagccc catatccgtg gcgtcgacaa
    38461 tcagtaaccg cgtagggcgc agttcacgga tggcgacgat gtcgttttcc ggtgcactac
    38521 cgccgtcaat caccacccag ttacctttcg gcgcggcggc gcacttttcc gccagcagcg
    38581 gacctgcgcc atcatcgccc atcatgctat tgccaacaca gagtaaaacg tcagtcacgc
    38641 aatctcctca ccatcaaata gatggcgttt tcctgatgaa tatcatgcag catacttaac
    38701 agcattgtac tccattcctg ctgctgcgaa gtttgcgctg cccgggcttt atcgaatgcg
    38761 ttggccagca tcggcacatg gttaatgtcg atgacgatct caccgtactt cggtacgcct
    38821 tccattttgc ggcgggcttc actgcccgcc tccagagtgg caatccatgc cagatattca
    38881 tcccacgggc aggtgagcgc cgcttccagg caatcgataa ccccaaggtg gtgaccaatc
    38941 gccaggctgt aatagaccac ctgctgcgcc tcggcgggcg tggcatcgtt ctcatcaata
    39001 aatttacggc tcagttgact gaacaccacc ttttcactca tcggatacgc acctcttcta
    39061 caacatgatt cagatggctg acaatctcgt tcagacgcgg atcgttttcc gcttccagcc
    39121 agcgtgcaac ctgttcttcg ccctgcccta actgtgtcag gaagtcatcg gcaatctgac
    39181 gaccgtaacg ataacccgcc aggcggcgtg cttcgcgatc cactttcacg cgcagcggct
    39241 gcaccatatc gccatgcagg atctccgccg gttgttcatc cagttcaccc ggcccacggg
    39301 cgtgaatttt ctgctccagc aggccgagcg ccattgcaaa gccgtacagc gtggcggcag
    39361 gcgttggcgg gcagccaggg atataaacat ccacagggac aattttatcc gtaccgcccc
    39421 acacgcagta gagatcgtgg aagatcccgc cgctgttacc gcaggcaccg taggagatac
    39481 aaattttcgg gtccggcgcg gactgccacg cacgcagcgc aggggatcgc attgcacggg
    39541 tgaccgcgcc ggtaaacagt aaaatatccg catgacgcgg tgaaggaacg actttaatgc
    39601 cgaagcgttc tgcatcaaac agcggcgata aagtggcgaa aatttcgatt tcgcagccgt
    39661 tgcagccgcc gcagtccacg cggtaaacat aggcagaacg tttgattttt ttcagtaacg
    39721 acgccttcat gctggcgatg gattcatcca ccgtcatcgg gaccggaatg ccgttggcgt
    39781 cacgggggcc taataaattg ctcatcagat ggcctctttc atatggcgag tcagttcaat
    39841 acggtcggac ggcaccaggc atttctggcg cttacattcc gggcaagtct caaagctttc
    39901 gcggtggttt tccgcgcggc tgtcgccgtt gtgcttaagc agcgcaatgg cgtagtcgat
    39961 ctctttctgg acggcgaaag gacgattgca gacgcgacag ttgcacagcg cgaagcgaga
    40021 ctgttgcagg aagtcttctt tcttccacac cgccagttcg tactcttgcg acagcttaat
    40081 cgccgccgtc gggcaaactt cttcgcagcg tccacagaag atgcagcgcc cgagattaaa
    40141 ctcccaggcc agctctcctg tggcgaggtc agtttcaacc gttaaggcgt ttgacgggca
    40201 ggcattgacg caggccgcgc agccgatgca ctgctgcggg ttctgctctg gcttaccacg
    40261 gaagttttta tcaaccgcaa tcggctccag cggataagac gaggtcgccg taccggtttt
    40321 gataactttt ttgataaagg taaacatggc gattccttat ttcagcggcg agtttttacg
    40381 ctcaatgctg tagcgctcga gttctttgta cggcaccact ttgctcttct tcttacgtac
    40441 atcgaccaca gtcatgcggt cggtacagga gtagcaaggg tccaggctac cgataatcag
    40501 cggcgcatcg gaaacagtgt tgccacgcag catgtagcgc agggtcggcc agttcgcgta
    40561 ggtcgcggca cggcagcgcc agcggtacag cttctggttg tcgccagtca tgctccagtg
    40621 gatatcatca ccgcgcggcg cttcggcaaa gcccagcgcg aaacggtgcg gaatgtaggt
    40681 aaagccttcc accatcagcg ggccacccgg caggttatcc agaccgtagt cgatcatgtt
    40741 cagcgcggta tagacttcgt tgatacgcac tttcagacgc gaaataacgt cgcagccctg
    40801 ctcgctgtgg acttccattg gcagcaggcc ataaccaaca aacgggtgat cagcgcgggt
    40861 atcgcgagcg tgtccgctgg cgcggaccat cgggccaacg ttactgaaat cgcgggcaat
    40921 ttccgggtcc agacgaccaa tgccgacggt gcgctgttcc atgttcggtg tgctcagcag
    40981 cacatccacc agctcctgca cttcacgacg catctgttgc gccagctggc gggtctggat
    41041 catgtcatct ttcaacagat cgcgacgaat cccgccgatc aggttcaggc cgtaggtttt
    41101 acgcgcaccg gtgaggatct cggccatttt catggaggtt tcacgcacgc ggaagaattg
    41161 cataaagccg gagtcgaagc cggtaaagtg gcaggcgagg ccgaggttga gcagatgcga
    41221 gtgcaggcgt tccacctcca gcagaatggc gcggatcatc tgcgcacgtt ctggcacctg
    41281 aatacccatc gcgttttcca ccgacgtggt gtaggcggtg ctgtgggcga agccgcagat
    41341 cccgcacaca cggtcagaga ggaaggtcac ttcgttataa cccatgcggg tttccgccag
    41401 tttttccata ccgcgatgga catagaacaa gcggtagtct gcgtcgataa tgttttcgcc
    41461 atcgacgaac agacggaagt ggcccggttc gtcagaagtg acgtgcagcg gaccaatcgg
    41521 cacgacgttg tttttcttgt cgcccagttc gttgatgaac tcgtaggttt cagcatcggt
    41581 ggtcggtgcc ggacgctgac gataatccat gctgtcttta cgcagcggat aaagttcatc
    41641 cggccagtca tccggcagca ccagacggcg ttcatccggc agaccaaccg gaatcaaacc
    41701 gtacatatcg cgcacttcgc gctcgcccca caccgccgcc ggaacgcgcg gcgtcacgga
    41761 cggatactcc ggtttgttgg catcaacttc gacgcgaacc gttacccagc acttagtccc
    41821 cttctccatc gacagcacgt aataaacggc gtaatgacca ttcagtttgc gttcgtcgtt
    41881 accaaaaagc accgacagcc agcccccctg cttgtagtag agaaactcca ccacttccgg
    41941 cagatagttc acctttacgg tgacagtcag ctgatctttg gtctgccagg cgtggtccag
    42001 cacgacgccc ggaaatgcct cattcagcgc ggcgagataa tgttgaccta atttttcttc
    42061 agacatgctc aaactctctt taatcacgcc gccagcaagg agacgaacgc taaaaatgca
    42121 aagccaaacc cagcccaggt aatgcgcgga gtaatatcaa gacgcagacg ggccatgctg
    42181 ttttcgaaca gcgcgataac caggacgccg accaccagtt ttacgatcgc aatcaccagc
    42241 gccagcagca gtccaccggc ggtgaaggtt tccatttgtc cccacggaat aaacaccccg
    42301 acgaacatct gcaacaccac cagctgtttc aggctgatac cccatttcat gacgccaaag
    42361 ccgctgccgc tatactcaga gagcggacct tcctgcaact cctgctcggc ttccgccagg
    42421 tcgaacggca gtttgcccat ttcgataaaa gtggcgaacg cacaggcgca gagcgccagc
    42481 accagcggga tgctttggct cagcggccag tgataaacgg tgtcggtaat gttgctgatg
    42541 ttggtggaac cggcaacctg tgcggcaacc cacagaccaa gcagcaacat cggttcgacc
    42601 agcacgccaa gcatcgcttc acggctcgca ccgatagcgg taaacgggct accggtatcc
    42661 agaccggaaa tggcaaagaa gaaacgcgcg atggcgaaga gatacagtaa ggtgatcaaa
    42721 tcgcccagtt gcggcagcgg agaaccgacg gtcaccaccg gcagcgcagt agcgatagtc
    42781 agcatgacgc ccaccatcac atacggcgtc aggcggaaca cccagccaga ggcatccggg
    42841 ccaacgctct ggcggcccag cagtttgata atgtcgcgat actcctgcaa cacgcccggc
    42901 ccgcgacggt tatgcagacg ggcgcgcgcc acgcgggtaa taccggagag cagcggcgca
    42961 acggcaaata acaccagcgc ctgaattaac ggatataaaa cactcattct caggctcctc
    43021 gtgaaacaat aatcaccacc agtaccgcca gttcaaccag cgccatccgg cggaacagca
    43081 acgcactacc ttcgcactgc cagcccggca ccagcgacac cggattcagc catttgcgca
    43141 gtttcagcac tggcgcaaac gcctgtttaa ccggcatggc aaaaccgtga gcggtaatca
    43201 ccattgattt ttcatggtcg tagccgcaca cccaggccgc accgcgggaa cgtgacggca
    43261 ggcggtcgcc tttgcaaatc gccataatga tgaatggcag cagcgggcag gcaatcagca
    43321 gcaatgtgat cattggttga gaaacggtgg tgttagcagg ctccagaggc agaggtacgg
    43381 cagcagagag catcggcagc agccacggcg cagcaacacc gccaattacg cagcaaatcg
    43441 ccagtgccac tacgcttacg ctcatcagga gcggcgcaca ggtggcgttt tcggcttctt
    43501 tggtacgcgg cgcgccgagg aacgtgacgc catagacttt cgccatacac atcaccgcca
    43561 gcgcaccggt aattgccaga cccacagcga gcagcggccc cagcagacgg gcaacaaacg
    43621 cgccactatt gctcagtttg aaaaaggatt gatagataac ccattccccg gcaaacccgt
    43681 tcagcggcgg cagcgcagcc attgccatca acccgactaa catggcgatg gagataaccg
    43741 gcattttctt gccaatacca ccgagttttt cgatatcgcg atgaccggta cggaaccaga
    43801 cgctccccgc cccgaggaac agtacgcttt tgaacaggct atggttaagc agatggtaca
    43861 gaccaccgac caggccaaga gcaatcagcg ccggttgttc gagcgcgata cccgttacgc
    43921 cagcgcccag ccccagcagg ataatgccga tattttccag ggtgtggtaa gccagcaggc
    43981 gctggatgtt gtgctccatc agcgcataca gaccaccgac aaacgcggtg atcatgccga
    44041 gcaccagcag cacgatcccc caccacagcg gtgcattacc gcccagcagt gacagggtta
    44101 aaatgcccag caggccaatt ttcatgacta ccgtagaaaa caacgcggca gctggcgcag
    44161 aggcgttagc atgtgcctgc ggcacccagc cgtgcagcgg aataatcccg gcgagcaggc
    44221 caaagccaat cacaccgagc agccagatat cggaaccgag cggcagctgt tgcatacgca
    44281 tatccagcag gcgcagatcc agcgtgccat aacgctgcca cagcagccag caagcaatcg
    44341 ccagcagcag agtgccaaga cgccccagcg caaaccacag tttgccctct tttgtttcga
    44401 cgtaatactc gatggtgtgg ctgttaaagc catccgccag ggtgacgtaa atacgaaaat
    44461 gttcaaaaag gacgaaacag agttctttgt ccggcgcgca gctcatggcg tgatgcaggc
    44521 gcgctttcga taacgtgatc ccctgaacca gcgaattgca gtagatgtgc cactggtcct
    44581 gtaggcgacg atgccgctgt gcgatgtaat cggctttctc gcttatttcc caaatagtca
    44641 ttgtcaggtt acccgtttaa cagagatgcc agctttaagc attttctgtg ccaattttta
    44701 atttattgtt attaaaacga tttttaagct aaagatgaat ttcgtcgccg tgtcgacgtg
    44761 tcatttcgac atcatcgaca ttattcaccg cagggataat caacactggc acaattattg
    44821 cttgtagctg gcaatagtta atgggaggcg atatgcacga aataaccctc tgccaacggg
    44881 cactggaatt gatcgaacag caggccgcaa aacacggcgc aaaacgcgta actggggtct
    44941 ggctcaaaat tggcgcattt tcttgtgtcg aaaccagctc tcttgccttt tgttttgatc
    45001 tggtttgccg cggcagcgtg gcggaaggtt gtaaactgca cctcgaagaa caagaggtcg
    45061 aatgctggtg tgaaacatgc caacagtatg tgacgctatt gacccagcgc gtccgccgct
    45121 gtccacagtg tcatggtgac atgctacaga ttgtggcaga cgacggttta cagattcggc
    45181 ggatagaaat agaccaggag tgagcgatgt gtacaacatg cggttgcggt gaaggcaacc
    45241 tgtatatcga gggtgatgaa cataaccctc attccgcgtt tcgtagcgcg ccatttgccc
    45301 cggcggcacg cccgaagatg aaaatcaccg gcattaaagc gcctgaattt acccccagcc
    45361 agactgaaga aggcgacctg cattacggtc atggcgaagc gggcactcac gcaccgggca
    45421 tgagccagcg tcggatgctg gaagtcgaaa ttgacgtgct ggacaaaaac aaccgtctgg
    45481 ctgaacgcaa ccgcgcgcgc tttgctgccc gcaagcaact ggtgctcaac ctggtttcca
    45541 gcccaggttc cggtaaaacc accctgctga cggaaaccct aatgcgcctg aaagacagcg
    45601 ttccgtgcgc ggttattgaa ggtgaccagc aaaccgtgaa cgatgccgca cgcattcgcg
    45661 ctaccggcac accagcgatt caggtgaaca caggtaaagg ctgccatctt gacgcacaga
    45721 tgattgccga cgccgcaccg cgtctgccac tggacgataa cggtattctg tttatcgaaa
    45781 acgttggcaa cctcgtatgc ccggccagct tcgatctcgg tgaaaaacac aaagtggcgg
    45841 tgctttccgt taccgaaggt gaagacaaac cgctgaaata tccgcatatg tttgccgccg
    45901 cctcgctgat gctgctcaac aaagttgacc tgttgccgta tctcaacttt gacgttgaga
    45961 agtgcatcgc ctgcgcccgc gaagtcaatc cagaaattga aatcatcctt atttccgcca
    46021 ccagcggtga agggatggac cagtggctga actggctgga gacacagcga tgtgcatagg
    46081 cgttcccggc cagatccgca ccattgacgg caaccaggca aaagtcgacg tctgcggcat
    46141 tcagcgcgat gtcgatttaa cgttagtcgg cagctgcgat gaaaacggtc agccgcgcgt
    46201 gggccagtgg gtactggtac acgttggctt tgccatgagc gtaattactg aagccgaagc
    46261 acgcgacact ctcgacgcct tacaaaacat gtttgacgtt gagccggatg tcggcgcgct
    46321 gttgtatggc gaggaaaaat aatgcgtttt gttgatgaat atcgcgcgcc ggaacaggtg
    46381 atgcagttaa ttgagcatct gcgcgaacgt gcttcacatc tctcttacac cgccgaacgc
    46441 cctctgcgga ttatggaagt gtgcggtggt catacccacg ctatttttaa attcggcctc
    46501 gaccagttac tgcctgaaaa cgttgagttt atccacggtc cgggttgccc tgtgtgcgta
    46561 ctgccgatgg gtagaatcga cacctgcgtg gagattgcca gccatccgga agtcatcttc
    46621 tgtacctttg gcgatgccat gcgcgtacca gggaaacagg gatcgctgtt gcaggcaaaa
    46681 gcacgcggtg ccgatgtgcg catcgtttac tcgccgatgg atgcgttgaa actggcgcag
    46741 gagaatccaa cccgcaaagt ggtgttcttc ggcttaggtt ttgaaaccac catgccgacc
    46801 accgccatca ctctgcaaca ggcgaaagcg cgtgatgtgc agaattttta cttcttctgc
    46861 cagcacatta cgcttatccc gacgctgcgc agtttgctgg aacagccgga taacggtatc
    46921 gacgcgttcc tcgcgccggg ccacgttagt atggttatcg gcactgatgc ctataatttt
    46981 atcgccagcg attttcatcg tccgctggtg gtcgctggtt tcgaacccct tgatctactg
    47041 caaggcgtgg tgatgctggt ggagcagaaa atagcggccc acagcaaggt agagaatcag
    47101 tatcgtcggg tggtaccgga tgccggtaac ctgctggcgc aacaggcgat tgccgatgtg
    47161 ttctgtgtca acggcgacag cgaatggcgc ggcttaggcg tgattgaatc ttctggcgtg
    47221 cacctgacgc cggattatca acgattcgat gccgaagcac atttccgccc ggcaccgcag
    47281 caggtctgcg atgacccgcg cgcgcgttgt ggtgaggtat taacgggcaa atgtaagccg
    47341 catcaatgcc cgctgtttgg taacacctgt aatcctcaaa ccgcatttgg tgcactgatg
    47401 gtctcctccg aaggagcgtg cgccgcgtgg tatcagtatc gtcagcagga gagtgaagcg
    47461 tgaataatat ccaactcgcc cacggcagcg gtggccaggc gatgcagcaa ttaatcaaca
    47521 gcctgtttat ggaagccttt gccaacccgt ggctggcaga gcaggaagac caggcacgtc
    47581 ttgatctggc gcagctggta gcagaaggcg atcgtctggc gttctccacc gacagttacg
    47641 tcattgaccc gctgttcttt cctggcggta atatcggcaa gctggcgatt tgcggcaccg
    47701 cgaatgacgt tgcggtcagt ggcgctattc cgtgctatct ctcctgtggc tttatcctcg
    47761 aagaaggatt gccgatggag acactgaaag ccgtagtgac cagcatggca gaaaccgccc
    47821 gcacggcagg cattgccatc gttactggcg atactaaagt ggtgcagcgc ggcgcggcag
    47881 ataaactgtt tatcaacacc gctggcatgg gcgcaattcc ggcgaatatt cactggggcg
    47941 cacagacgct aaccgcaggc gatgtattgc tggttagcgg tacactcggc gaccacgggg
    48001 cgactatcct taacctgcgt gaacaactgg ggctggatgg tgaactggtc agcgactgcg
    48061 cggtgctgac gccgcttatt cagacgctgc gtgacattcc cggcgtgaaa gcgctgcgtg
    48121 atgccacccg tggtggtgta aacgcggtgg ttcatgagtt cgcggcagcc tgcggttgtg
    48181 gtattgaaat ttctgaatca gcactgccgg ttaaacctgc tgtgcgcggc gtttgcgaac
    48241 tgctgggact ggacgccctt aactttgcca acgaaggcaa actagtaata gctgttgaac
    48301 gcaacgcagc agagcaagtg ctggcagcgt tacattccca tccactgggg aaagacgcgg
    48361 cgctaattgg tgaagtggtg gaacgtaaag gtgttcgtct tgccggtctg tatggtgtga
    48421 aacgaaccct cgatttacca cacgccgaac cgcttccgcg tatatgctaa taaaattcta
    48481 aatctcctat agttagtcaa tgaccttttg caccgctttg cggtgctttc ctggaagaac
    48541 aaaatgtcat atacaccgat gagtgatctc ggacagcaag ggttgttcga catcactcgg
    48601 acactattgc agcagcccga tctggcctcg ctgtgtgagg ctctttcgca actggtaaag
    48661 cgttctgcgc tcgccgacaa cgcggctatt gtgttgtggc aagcgcagac tcaacgtgcg
    48721 tcttattacg catcgcgtga aaaagacacc cccattaaat atgaagacga aactgttctg
    48781 gcacacggtc cggtacgccg cattttgtcg cgccctgata cgctgcattg cagttacgaa
    48841 gaattttgtg aaacctggcc gcagctggtc gctggtgggc tataccccaa atttggtcac
    48901 tattgcctga tgccactggc ggcggaaggg catatttttg gtggctgtga atttattcgt
    48961 tatgacgatc gtccctggag cgaaaaagag ttcaatcgtc tgcaaacatt tacgcagatc
    49021 gtttctgtcg tcaccgaaca aatccagagc cgcgtcgtca acaatgtcga ctatgagttg
    49081 ttatgccggg agcgcgataa cttccgcatc ctggttgcca ttaccaacgc ggtgctttcc
    49141 cgcctggata tggacgaact ggtcagcgaa gtcgccaaag aaatccatta ctatttcgac
    49201 attgacgata tcagtatcgt cttacgcagc caccgtaaaa acaaactcaa catctactcc
    49261 actcactatc ttgataaaca acatcccgcc cacgaacaga gcgaagtcga tgaagccgga
    49321 accctcaccg aacgcgtgtt caaaagtaaa gagatgctgc tgatcaatct ccacgagcgg
    49381 gacgatttag ccccctatga acgcatgttg ttcgacacct ggggcaacca gattcaaacc
    49441 ttgtgcctgt taccgctgat gtctggcgac accatgctgg gcgtgctgaa actggcgcaa
    49501 tgcgaagaga aagtgtttac cactaccaat ctgaatttgc tgcgccagat tgccgaacgt
    49561 gtggcaatcg ctgtcgataa cgccctcgcc tatcaggaaa tccatcgtct gaaagaacgg
    49621 ctggttgatg aaaacctcgc cctgaccgag cagctcaaca atgttgatag tgaatttggc
    49681 gagattattg gccgcagcga agccatgtac agcgtgctta aacaagttga aatggtggcg
    49741 caaagtgaca gtaccgtgct gatcctcggt gaaactggca cgggtaaaga gctgattgcc
    49801 cgcgcgatcc ataatctcag tgggcgtaat aatcgccgca tggtcaaaat gaactgcgcg
    49861 gcgatgcctg ccggattgct ggaaagcgat ctgtttggtc atgagcgtgg ggcttttacc
    49921 ggtgccagcg cccagcgcat tggtcgtttt gaactggcgg ataaaagctc cctgttcctc
    49981 gacgaagtgg gcgatatgcc actggagtta cagccgaagt tgctgcgtgt attgcaggaa
    50041 caggagtttg aacgtctcgg cagcaacaaa atcattcaga cggacgtacg tttaattgcc
    50101 gcgactaacc gcgatctgaa aaaaatggtc gccgaccgag agttccgtag cgatctctat
    50161 taccgcctga acgtattccc gattcacctg ccgccactac gcgagcgtcc ggaagatatt
    50221 ccgctgctgg cgaaagcctt taccttcaaa attgcccgtc gtctggggcg caatatcgac
    50281 agcattccag ccgagacgct gcgcaccttg agcaacatgg agtggccggg taacgtacgc
    50341 gaactggaaa acgtcattga gcgcgcagta ttgctaacac gcggcaacgt gctgcagctg
    50401 tcattgccag atattgcttt accggagcct gaaacgccgc ctgccgcaac ggttgtcgct
    50461 caggagggcg aagatgaata tcagttgatt gttcgcgtgc tgaaagaaac caacggcgtg
    50521 gttgccgggc ctaaaggcgc tgcgcaacgt ctggggctga aacgcacgac cctgctgtca
    50581 cggatgaagc ggctgggaat tgataaatcg gcattgattt aactgcaaat tgccggacag
    50641 atctgcctgt ccggcatact attcacgagg ttttttcgga cgatattttt ccggcagttc
    50701 tggcaccgga cgcttgtcat cgatgagatg acgcacggtt aagatcggat gacgccacag
    50761 cattctcggc ccggcccaac gcataatctg tttcatctct tcacgctttg caggctggta
    50821 acagtgcacc ggacactgct tacaggctgg tttctcttcg ccgaacacac atttatccag
    50881 ccgcttttgc gcgtaaacaa acaacgcctc gtaatgctcc ggctccgctg acgcctgcgg
    50941 gcatttcgct tgataaagat cgatcatttt tttaatcgtc agtttttcac gagagatacg
    51001 cttgccggac atgctgcctc catactctta aggtgtattt atattacaac ttaatttgaa
    51061 aggggactat ggctctgaag gaggaggttt attcaaccga cgcaattttg cgtacttgct
    51121 tcataagcat cacgcaaaag ctgcaaaaca gcatctttcc cggaaccagc atcaagaact
    51181 cgccgttcgc ttcttcccct gaaatgatta actccggtat catgtgcgcc ttatgtgatt
    51241 acaacgaaaa taaaaaccat cacaccccat ttaatatcag ggaaccggac ataaccccat
    51301 gagtgcaata gaaaatttcg acgcccatac gcccatgatg cagcagtatc tcaggctgaa
    51361 agcccagcat cccgagatcc tgctgtttta ccggatgggt gatttttatg aactgtttta
    51421 tgacgacgca aaacgcgcgt cgcaactgct ggatatttca ctgaccaaac gcggtgcttc
    51481 ggcgggagag ccgatcccga tggcggggat tccctaccat gcggtggaaa actatctcgc
    51541 caaactggtg aatcagggag agtccgttgc catctgcgaa caaattggcg atccggcgac
    51601 cagcaaaggt ccggttgagc gcaaagttgt gcgtatcgtt acgccaggca ccatcagcga
    51661 tgaagccctg ttacaggagc gtcaggacaa cctgctggcg gctatctggc aggacagcaa
    51721 aggtttcggc tacgcgacgc tggatatcag ctccgggcgt tttcgcctga gcgaaccggc
    51781 cgaccgcgaa acgatggcgg cagagctgca acgcactaat ccggcggaac tgctgtatgc
    51841 agaagatttc gccgagatgt cgctgattga aggccgtcgc ggcctgcgcc gtcgcccgct
    51901 gtgggagttt gaaatcgaca ccgcgcgcca gcagttgaat ctgcaatttg gcacccgcga
    51961 tctggtcggt tttggcgtcg agaacgcgcc gcgcggactt tgtgctgccg gttgtctgtt
    52021 gcagtatgcg aaagataccc aacgcacgac cctgccgcat attcgttcta tcaccatgga
    52081 acgtgagcag gacagcatca ttatggatgc cgcgacacgt cgtaacctgg aaattactca
    52141 gaacctggcg ggcggtgcgg aaaatacgct ggcttctgtg ctcgactgca ccgtcacgcc
    52201 gatgggtagt cgtatgctga aacgctggct gcatatgcca gtgcgcgata cccgcgtgtt
    52261 gcttgagcgc cagcaaacta ttggcgcatt gcaggatttc accgccgggc tacagccggt
    52321 actgcgtcag gtcggcgacc ttgaacgtat tctggcacgt ctggctttac gaactgctcg
    52381 cccacgcgat ctggcccgta tgcgccacgc tttccagcaa ctgccggagc tgcgtgcaca
    52441 gttagaaact gtcgatagtg caccggtaca ggcgctacgt gagaagatgg gcgagtttgc
    52501 cgagctgcgc gatctgctgg agcgagcaat catcgacaca ccgccggtgc tggtacgcga
    52561 cggtggtgtt atcgcatcgg gctataacga agagctggat gagtggcgcg cgctggctga
    52621 cggcgcgacc gattatctgg agcgtctgga agtccgcgag cgtgaacgta ccggcctgga
    52681 cacgctgaaa gttggcttta atgcggtgca cggctactac attcaaatca gccgtgggca
    52741 aagccatctg gcacccatca actacatgcg tcgccagacg ctgaaaaacg ccgagcgcta
    52801 catcattcca gagctaaaag agtacgaaga taaagttctc acctcaaaag gcaaagcact
    52861 ggcactggaa aaacagcttt atgaagagct gttcgacctg ctgttgccgc atctggaagc
    52921 gttgcaacag agcgcgagcg cgctggcgga actcgacgtg ctggttaacc tggcggaacg
    52981 ggcctatacc ctgaactaca cctgcccgac cttcattgat aaaccgggca ttcgcattac
    53041 cgaaggtcgc catccggtag ttgaacaagt actgaatgag ccatttatcg ctaacccgct
    53101 gaatctgtcg ccgcagcgcc gtatgttgat tattaccggc ccgaacatgg gcggtaaaag
    53161 tacctatatg cgccagaccg cactgattgc gctgatggcc tacattggca gctatgtacc
    53221 ggcacaaaaa gtcgagattg gacctatcga tcgcatcttt acccgcgtag gcgcggcaga
    53281 tgacctggct tccgggcgct caacctttat ggtggagatg actgaaaccg ccaatatttt
    53341 acataacgcc accgaataca gtctggtgtt aatggatgag atcgggcgtg gaacgtccac
    53401 ctacgatggt ctgtcgctgg cgtgggcgtg cgcagaaaat ctggcgaata agattaaggc
    53461 attgacgctg tttgccaccc actatttcga gctgacccag ctaccggaga aaatggaaga
    53521 cgtcgccaac gtgcatctcg atgcgctgga gcacggagac accattgcct ttatgcatag
    53581 cgtgcaggat ggcgcggcga gcaaaagcta cggcctggcg gttgcagctc tggcaggcgt
    53641 gccaaaagag gtgattaagc gcgcacggca aaaactgcgt gagctggaaa gcatttcgcc
    53701 gaacgccgcc gctacgcaag tggatggtac gcaaatgtct ttgctgtcag taccggaaga
    53761 aacctcgcca gcggtcgaag ctctggaaaa cctggacccg gattcactga ctccgcgtca
    53821 ggcgctggaa tggatttatc gcttgaagag cctggtgtaa taacaattcc cgatagtctt
    53881 ttgctatcgg gaatattaac gacaactgac gaataaaata aaaaccccct gtataatagg
    53941 aaagcttatt ttacagggta aaaccatgcc atctacacgc tatcaaaaaa ttaatgccca
    54001 tcactatcgc catatatggg tcgttggtga tatacatggt gaatatcaat tattacaatc
    54061 ccgcttacat caactctctt tttgccctga aaccgactta cttatttctg tcggcgataa
    54121 tattgatcgt gggccggaga gtcttgacgt cctgcgcctg ctaaaccagc cctggtttat
    54181 ctccgttaaa ggcaaccacg aagcaatgga gctggatgcg ttcgcgaccg gcgatggcaa
    54241 tatgtggctt gccagcggtg gtgactggtt tttcgattta aatgattcag agcaacaaga
    54301 ggcaatagat ctgttgctga aattccatca ccttccacat attattgaaa tcactaacga
    54361 cataataaaa tatgtcatcg cacatgcaga ttatccgggt gatgaatatc tctttggcaa
    54421 agaaatagcg gagagcgaat tactctggcc tgtttatcgt gtgcagaaat cgcttaatgg
    54481 cgagttacaa caaataaacg gcgctgatta ttttatattt ggacatatga tgtttgataa
    54541 cattcagacg ttcgctaacc agatttatat tgataccgga tcgccgaaaa gtgggcggct
    54601 gtcattttat aaaataaggt agtctcatgc ttcttctgtg aagcatgagt aaccagatgt
    54661 tattgcaggc cattattcat ttttcgctac cagcaaagag agatcctgct tcgccagcgc
    54721 gcgactggca ctctccggca aaccgtcgtc tgtaataatc tgatcaaact cgcttaatgg
    54781 taacgccagc catgtcgcca cctgaccata tttcgtcgca tcacagacca aaactcgctg
    54841 gcggctggca ctagcaatcg cccgtttcac cgtgacttta tcttccgctg gcgtagaaat
    54901 cccccgcaca ctccatgacg atgcagaaat aaaagcctga tcaatcatca ggctgcgcag
    54961 catggtcgca gcggcttccc cgacacagga acggttttcc cgacacactg caccgccagt
    55021 gtgaataatt gtgcaattac tgttgtcgag caagtagttc gcaataacga aatcgtttgt
    55081 gaccacagtc agtgactcca tgtgaatcag atgctgtgct atcgctaacg tggtcgttcc
    55141 tgcatccaga tagatacaac ttcccggctg aacaagactt gccgccagct tgccaatagc
    55201 cgctttttgc gtcattgcta gcgcagtttt tacctgatga gaaggttcat gcgccacgcg
    55261 tcccggagac tggacgcctc cggacaccag cacaacggct ccctgctgct ccagtttttg
    55321 taaatcccga cgaatggtca tatgtgatac attcattctg tccgttagtt cagcaatact
    55381 gacaatgcct ttttcagcta ccatctcaag gatgatttgg cgacgctcta cgggtatcaa
    55441 cttttgctcc ttcctttgtc ctgctgacat tctacgctat ttgcctgcga aacgtgcgcg
    55501 gcgcaactaa cgcttagttc acataaaata acacacaatg ttaatttatg tgaatcggct
    55561 caccatatcg ttatcttcca gcgcttatat tcacaatatc aaacaaaata tcacttaaat
    55621 taacaaggag agcagatgaa aacgggatct gagtttcatg tcggtatcgt tggcttaggg
    55681 tcaatgggaa tgggagcagc actgtcatgt gtccgcgcag gtctttctac ctggggcgca
    55741 gacctgaaca gcaatgcctg cgctacgttg aaagaggcag gtgcttgcgg ggtttctgat
    55801 aacgccgcga cgtttgccga aaaactggac gctctgctgg tgctggtggt caatgcggcc
    55861 caggttaaac aggtgctgtt tggtgaaaca ggcgttgcac aacatctgaa acccggtacg
    55921 gcagtaatgg tttcttccac tatcgctagt gctgatgcgc aagaaattgc taccgctctg
    55981 gctggattcg atctggaaat gctggatgcg ccagtttctg gtgatgcagt aaaagccgct
    56041 aacggtgaaa tgactgtcat ggcctccggt agcgatattg cctttgaacg actggcaccc
    56101 gtgctggaag ccgttgccgg aaaagtttat cgcataggtg cagaaccggg actaggttcg
    56161 accgtaaaaa ttattcacca gttgttagcg ggcgtacata ttgctgccgg agccgaagcg
    56221 atggcacttg cagcccgtgc ggggatcccg ctggatgtga tgtatgacgt cgtgaccaat
    56281 gccgccggaa attcctggat gttcgaaaac cggatgcgtc atgtggtgga tggcgattac
    56341 accccgcatt cagccgtcga tatttttgtt aaggatcttg gtctggttgc cgatacagcc
    56401 aaagccctgc acttcccgct gccattggcc tcaacagcat tgaatatgtt caccagcgcc
    56461 agtaacgcag gttacgggaa agaagacgat agcgcagtta tcaagatttt ctctggcatc
    56521 actctaccgg gagcgaaatc atgatcaaga ttggcgttat cgccgatgat tttaccggcg
    56581 cgacggatat cgccagtttt ctggtggaaa acggtctacc aacggtacaa attaacggtg
    56641 ttccaacagg taaaatgccg gaagcaatcg acgcactggt gatcagcctg aaaacgcgct
    56701 cctgtccggt ggttgaagcc acacagcaat cgctggcggc tctgagctgg ttgcaacagc
    56761 aaggttgcaa acagatctat ttcaaatact gctctacttt cgacagtacg gcgaaaggta
    56821 atatcggccc ggttaccgat gcattaatgg atgctctcga cacgccgttt acggtcttct
    56881 ctccggccct gtcggtcaac ggacgtacgg tttatcaggg gtatttgttc gtaatgaatc
    56941 aactgctggc cgaatccggg atgcgccatc acccggtaaa tcccatgacc gacagctatc
    57001 ttccccgtct ggttgaagcg caatccacag ggcgctgcgg cgtcgtttcg gcacatgttt
    57061 tcgaacaagg tgtggatgcc gttcgtcaag agcaggctcg cttacagcaa gagggctacc
    57121 gctacgcggt gcttgatgcg ctgaccgaac accatctgga aattcaggga gaagccttgc
    57181 gcgatgcccc actggtaacg ggcggttctg gtctggcgat tggcctggcc cggcagtggg
    57241 cgcaagaaaa cggtaaccag gctcgcgaag cagggcatcc gctcgctggg cgcggcgtag
    57301 tgctctccgg ttcatgctct caaatgacca accgccaggt ggcacattac cgtcaaattg
    57361 caccagcccg tgaagttgat gtggcacgct gcctctcaac cgaaactctg gccgcttatg
    57421 cacacgaact ggcagagtgg gttctgggcc aggaaagtgt acttgctcca ctggtttttg
    57481 ccaccgccag cactgacgca ttggcagcaa ttcaacagca atacggtgca caaaaagcca
    57541 gtcaggcagt agaaactctg ttttctcaac tagcggcgcg gttagcagcg gaaggcgtga
    57601 cacgctttat tgtcgcaggc ggtgagacct ccggcgtagt cacacagagc ctgggcataa
    57661 aagggtttca tattggccca accatttccc ccggcgtgcc gtgggtaaac gcactggata
    57721 agcctgtctc actcgccctt aaatctggca acttcggtga tgaagccttt tttcacgagc
    57781 ccaaagagag tttttatcat gagcgatttc gcaaaagtag agcagtcttt gcgagaggag
    57841 atgacgcgga ttgccagttc attctttcag cgcggctatg caaccggttc ggctggcaat
    57901 ctgtcgctgc ttttacctga cgggaattta ctggcgacac cgacaggttc atgcctgggc
    57961 aatctcgatc cgcagcggct ttccaaagtc gccgcggatg gcgaatggtt aagtggtgac
    58021 aaaccctcga aagaggtgct ctttcatctg gcgctgtatc gcaacaatcc gcgctgtaaa
    58081 gcggtggtgc atttgcacag cacatggtcg acggcgcttt cctgcctgca agggctggac
    58141 agcagcaacg ttattcgtcc gttcacacca tacgtggtga tgcggatggg aaatgtcccg
    58201 ctggtgccct attaccgacc gggcgataaa cgcatcgcac aggatctggc ggaactggca
    58261 gcagacaatc aggctttttt actggcaaat catggcccag tggtttgcgg tgaaagcctg
    58321 caagaagccg ccaacaatat ggaagagctg gaggaaacgg caaagctgat ttttattctc
    58381 ggtgaccgcc cgatccgtat ctgaccgcag gtgaaattgc ggaattaagg agttaatgca
    58441 atgcctcgtt ttgcagctaa tttatccatg atgttcaccg aagtgccttt tattgaacgc
    58501 ttcgccgcag cgcgaaaagc cgggttcgat gctatggaat ttctgtttcc ctatgactac
    58561 tccaccctgc aaatccaaaa gcaactggag caaaaccatc tgacactggc gctgttcaat
    58621 accgctcccg gagatattaa tgcgggggaa tggggattat ccgcccttcc cggacgtgag
    58681 cacgaagcac acgcagacat cgacctggca ctggaatatg cattggcgct caattgtgaa
    58741 caagtccatg tgatggcagg cgtcgtgccc gctggcgaag atgctgaacg gtaccgggca
    58801 gtatttatcg ataatctccg ctacgctgcc gaccgctttg cgccacacgg caagcgaata
    58861 ttagttgaag cactcagccc cgacgttaag cctcattatc tcttctccag ccagtatcag
    58921 gcactggcta ttgttgaaga ggttgcgcga gataacgtgt ttattcaact agatactttt
    58981 catgcgcaaa aagtagatgg caacctgacg catttaatcc gcgactacgc tgggaaatat
    59041 gcgcacgtac aaattgccgg actacctgat cgacatgaac cggacgatgg agaaatcaac
    59101 tatccgtggc tgttccgcct gttcgatgag gtgggatatc agggctggat cggttgtgaa
    59161 tataaacctc gtggcctcac cgaagaaggg cttggctggt ttgacgcctg gcgctaattc
    59221 gttaaatccc taattacaac gtacccatac atccccccat ctacggatgg ggtaggttaa
    59281 ctataacttt cagacagggt ttcccatgtc cacaattaca ttgttatgca ttgcgttagc
    59341 tggcgtaatc atgctgttgc tgctggtcat caaggcaaag gtacaaccat tcgttgctct
    59401 gctcctcgtc agcctgttag tcgcacttgc ggcgggtata ccggcgggcg aagtgggtaa
    59461 agtgatgatc gccgggatgg gcggtgtgct tggttccgtc actattatta ttggtctggg
    59521 cgctatgctg gggcgtatga tcgaacactc tggtggtgca gagtcactgg ctaattattt
    59581 cagtcgcaag ttaggtgaca aacgaactat cgctgcgctg actctggcag cgttcttcct
    59641 cggtattccc gtcttctttg atgtcagctt tattattctt gcgccaatca tttacggttt
    59701 tgccaaggtt gccaaaatat cgccactcaa atttggcctg cctgtcgctg gaatcatgct
    59761 aactgttcat gtggcagtac cgccgcatcc aggccctgtc gccacagcgg ggttactcca
    59821 cgcagacatc ggctggctaa ccatcatcgg tattgcgatt tctattcccg tagggattgt
    59881 tggctacttt gcagcgaaaa taatcaataa gcgccaatat gcgatgtcag tagaagtact
    59941 ggaacagatg caactggctc cggccagtga ggaaggcgcg acaaaattaa gcgataaaat
    60001 aaatccaccg ggcgtcgcgc tggtcacctc gctaattgtt attcctatcg cgattatcat
    60061 gacgggtacg gtttccgcaa cactgatgcc gccttcgcat cccctgcttg gtacgctaca
    60121 gctgatcggc tcaccaatgg tagctctaat gattgcgctg gtgctggcat tctggttatt
    60181 ggctttacgt cgcggctgga gcttacaaca caccagcgac attatgggct cagcccttcc
    60241 cactgcggcg gtagtgattt tggttactgg tgctggaggg gtatttggca aagtgctggt
    60301 ggaatcgggc gtcggcaaag cccttgccaa tatgctacaa atgattgacc tgcctctgtt
    60361 accagccgca tttattattt cactggctct gcgtgcatcg caggggtcag caaccgtagc
    60421 aatcctgaca accggcgggt tactctcaga agcggtgatg ggattgaatc cgattcagtg
    60481 cgtattggtg acgctggcag cctgctttgg tgggcttggc gcgtcacata ttaatgactc
    60541 agggttctgg attgtgacca aatatctggg gttgtcggta gcagacggtc tgaaaacctg
    60601 gacagtgtta acgaccattc tcggttttac cggattctta attacctggt gcgtatgggc
    60661 ggtaatttga ccttaataaa aaggtccgat gggcatcgga ccttttattg tgcacagaaa
    60721 aggccagcct cgcttgagac tggcctttct gacagatgct tacttactcg cggaacagcg
    60781 cttcgatatt cagcccctgc gtttgcagga tttcacgcaa acggcgcagg ccttcaacct
    60841 gaatctggcg aacacgttca cgggtgaggc caatttcacg acctacatct tccagtgttg
    60901 ccgcttcgta ccccagcaaa ccgaatcgac gtgccagcac ttcacgctgt ttggcgttca
    60961 gctcgaacag ccatttgacg atgctctgct tcatatcgtc atcttgcgtg gtatcttccg
    61021 gaccgttctc tttttcatcg gccaggatgt ccagcaacgc tttttcggaa tcaccaccca
    61081 gcggggtgtc taccgaggta atgcgctcgt taagacgaag catacggctg acgtcatcaa
    61141 ctggcttatc cagttgctct gcgatctctt ccgcacttgg ttcatggtcc agcttatggg
    61201 acaactcacg tgcggttcgc aggtaaacgt tcagctcctt tacgatgtga atcggcaaac
    61261 gaatagtacg ggtttggttc ataatcgccc gttcaatcgt ctggcgaatc caccaggttg
    61321 cgtatgttga gaagcggaaa ccacgttccg ggtcaaactt ctctaccgcg cggattagcc
    61381 ccaggttgcc ctcttcgata aggtccagca acgccagacc acgattgcca taacggcggg
    61441 caatttttac caccagacgc aagttactct cgatcatccg gcggcgagag gcgacatctc
    61501 cacgcagtgc gcgacgcgca aaataaactt cttcttcggc cgttaacagt ggtgaataac
    61561 caatctcacc aaggtaaagc tgagtcgcgt ccaacactcg ctgtgtggct ccctgcgata
    61621 acagttcctc ttcggccaaa tcgttatcac tgggttcctc ttctactaag gccttttcgt
    61681 caaaaacctc aactccgttc tcatcaaatt ccgcatcttc atttaaatca tgaactttca
    61741 gcgtattctg actcataagg tggctcctac ccgtgatccc ttgacggaac attcaagcaa
    61801 aagcctggtt ccgccgattt atcgctgcgg caaataacgc agcgggttta cggatttccc
    61861 cttgtaacga atttcaaaat gcaagcgtgt tgaactggtt ccggtgctac ccatggttgc
    61921 tattttttgc cccgccttca cttcttgttg ttcccggacc agcattgtgt cgttatgggc
    61981 gtaggcactc aggtaatcat cattatgttt gatgataatc agattaccgt agccgcgcag
    62041 cgcgttaccg gcataaacaa cgcggccatc tgcggtcgcg ataattgcct gtcctttgct
    62101 gcctgcgata tcaatcccct tgttgccccc ctcagaagcg ccaaaggttt cgatcacttt
    62161 gccctcagtc ggccagcgcc aggtggagat aggcgtactg gttgatgtac tgctgacagt
    62221 tggctcggtt gtgcttgctg ttggtaccgt tacaggcgct gtgaccgtgg tcgcagctgg
    62281 cttgttgttc ggcaacattt tgttagcact ctgttcaccc gaagattcag aatacgtaat
    62341 tgtcggttgc gacgcaacag caacggtgga attttgtgca gtcttgatca caactccttg
    62401 ctctgctgcg tcggcctggg taatggcatt tccgccagtg attggcgtac cggaagcatt
    62461 acccacctgc aaggtctgac caacgttcag cgcgtatggt gcctgaatat tgttgcgctg
    62521 agcaaggtca cggaaatcgt tgccagtaat ccaggcgata tagaaaagtg tgtcgccttt
    62581 tttcacggta taggtactgc cgctataact gcctttcgga atgttcccat actgacggtt
    62641 atagacgatg cgtccgtttt ccatctgtac cggctgctga gctactggct gcactggctg
    62701 gatttgcggt tgctgggctg tagacgtcgt ccccattttc ggcggcggcg taatcaacat
    62761 accagaattg gtatttgcag gcgcattgcc attaacggag ctgaccggtg ccggtggatt
    62821 tgaagtgtca gaacagcctg ccagccatag cgaaaccagt gacaaagccg caatgcggcg
    62881 aacggtgaat tttgggcttc ccgcgctcat ttatccccca ggaaaaattg gttaataacc
    62941 agtgacataa ttaccgtgca aggcacccta ctgaacactg gaaaagatgt tcacgatacg
    63001 ctgacctgcg gcaaaataac caggaaaaat ccaggtattt cctcacgttt taagccagct
    63061 cccccttcac taaagggaca aagcgcacgg cctccacggt atcgataata aattcgcctc
    63121 cccgacgacg cacccgtttc aaatactggt gctcctcccc tacgggtaag acgagaatcc
    63181 cgccttcgtc cagctgcgtc attagcgcag ttggaatttc cggcggtgcc gccgtaacaa
    63241 tgatagcgtc aaacggcgcg cgtgcctgcc aaccttgcca tccatcgcca tgacgggttg
    63301 aaacattatg taaatcaaga tttttcaggc ggcgacgcgc ctgccactgc aaacctttaa
    63361 tccgttcgac cgagcaaaca tgctggacaa gatgcgccag gattgccgtt tgatatcccg
    63421 aaccggtgcc aatttccagc acccgcgact gcggcgtcag ctcgagtaat tcggtcattc
    63481 gcgccaccat atacggctgc gaaattgtct gcccctgacc tatcggcaag gcgatattgt
    63541 cccaggcttt ttgttcaaac gcttcatcaa cgaatttttc acgcggcacg gcagcaagtg
    63601 cattcagcac ctgctcatcc tgaatacctt gcgcacgtaa ttgatccaga agtgcttgta
    63661 cgcgtctgct taccattgcg tgccaactcc cacgctgttt aaccagtctg aaaccacatc
    63721 ttgcgcgcta tgcgcagtta aatccacatg cagcggcgtg atggagacat agccctcatc
    63781 taccgcagca aaatcggtcc ccggaccggc atcacattta ccgcccggcg ggccaatcca
    63841 gtacagcgta ttgccgcgcg gatcttgctg cgggatcacc tgatctgccg gatgtcgtgt
    63901 accgcagcgc gtcacgcgaa tacctttgat ttgatccaag ggtaaatccg gaacgttaat
    63961 attaagaata cgtccggtgc gcagcggctc tttacacagt gcgcgcaaaa ttgaacaggt
    64021 taccgccgcg gcagtgtcgt aatgtttatg cccgtcaagc gagacggcca gcgccggaaa
    64081 acctaaatga cggccttcca tcgcggcggc taccgtaccg gaataaataa cgtcatcccc
    64141 cagattcggc ccggcgttaa tgccggacac aacaatgtcc gggcgcggac gcatcagagc
    64201 attcacgcca agatagacgc aatcggtcgg ggttcccatt tgcacagcaa tatcaccatt
    64261 ttcaaaggta aacgtgcgca gggaggattc cagtgtcaga gaatttgaag cgccgctgcg
    64321 gttacgatcg ggggcgacca cctgaacgtc agcaaactca cgcaaggctt tcgccagcgt
    64381 ttgtataccg ggtgcatgta ccccgtcatc attactcagc aatatgcgca taatcacctg
    64441 ttgtgttgat aagttccctg acaacgctgg ttgcaaaact acccgccgga agccagaaac
    64501 ggatctctac ggtgacgtca tcccaccaat tccagcttaa ttgttgcgga tacagcagca
    64561 tcgctctgcg cgcggcttca actttttcgc gcaccagtaa agcttgtaat tcagtttctg
    64621 cggcgacagc tgcttgttcg aatgccagcg ctttacgctg agttccccat tcgccactgc
    64681 ccggcaatgc ggcggttatc atcagctctt tatcgttgac gcgatgctgt aattccgcca
    64741 gttcttcggt ggttgctaca aaccagctac cacgtccggc taattgtagc gcatcgccgt
    64801 caacaacttg attaacgtct gcttttttga ggcgctcagc aacaatctga ttaaacaacg
    64861 cactgcgggc tgccgacaac caaaaactcc gtttattgcg atcgcgcacc ggagtattgg
    64921 tttgcgccca gcgcagcgcg ccctgcaagt tgctaccgcc aatcccaaaa cgttgggcac
    64981 cgaagtagtt cggtacacct tttacgcaaa tatcgatcag acgttgttca acgtcatcgc
    65041 gattgctcac ttcgcgcaga accagggtaa aggcgttacc tttcagcgcg cctaaacgca
    65101 gcttgcgctt gtgccgcgca tactccagca cctggcagcc ttccagttga aaggcgctca
    65161 gatcgggcat ttccttgcct ggcacgcgag cgcataacca ctgttccgta acagcatgtt
    65221 tgtctttttg cccagcgaag ctgacttcac gggcatgaat tttcaggaat ttcgccagtg
    65281 catccgccac aaaacgggta ttgcagccgt ttttgaggat tctaaccaga atatgctcac
    65341 cttcaccatc aggctcaaag cccaaatctt ccaccaccac aaagtcttcc ggattggctt
    65401 tcagcagccc ggtgccttgc ggtttaccgt ggaggtaagt gagattatca aactcaatca
    65461 ttttgttgcc ttaatgagta gcgccaccgc ttcacaggca atcccttccc cacgtccggt
    65521 aaatccaagt ttttccgtag tagtggcttt cacgttaaca tcatccatat ggcagccgag
    65581 atcttcggca ataaacacgc gcatttgtgg aatgtgcggc aacatcttcg gtgcctgagc
    65641 gatgatagtg acatcgacgt tgcccagggt ataacccttc gcctgaatac gacgccaggc
    65701 ttcgcgtagc agctcgcggc tgtcggcacc tttaaatgcc ggatcggtat ccgggaacag
    65761 cttgccgata tcccccagcg ccgccgcgcc aagcaatgca tcggtcaacg catggagcgc
    65821 cacgtcgcca tcagaatgcg ccagcaatcc tttttcgtaa ggaatgcgta cgccaccaat
    65881 gataattggg ccttcaccgc caaaggcatg tacgtcaaaa ccgtgtccaa ttcgcattat
    65941 gtattctcct gatggatggt tcgggtgagg taaaactcgg ccagtgccaa atcttccggg
    66001 cgcgtgactt taatgttatc cgcacggcct tcgaccaact gaggatggaa tccgcaatat
    66061 tccagcgccg aggcttcgtc ggtaatagtc gcgccttcat ttagagcgcg cgtcagacag
    66121 tcatgtaaca gctcacgagg gaaaaattgc ggcgtcagcg cgtgccataa gccgttgcga
    66181 tcaacggtat gagcaatggc atttttgccc ggttcggcac gtttcatcgt atcgcgcact
    66241 ggtgcggcta ggatccctcc cgtgcggctg gtttcgctca acgccaacaa tcgcgcgagg
    66301 tcatcctgat gcagacaagg acgagcggcg tcatgcacca atacccactg cgcgtcgcca
    66361 gcggctttca aacctgccag cacggaatcg gcacgctcat caccgccatc tacaacggtg
    66421 atttgcggat gattcgccag aggaagttgt gcaaaacggc tatcgccagg acttatggca
    66481 atgacgacac gtttcacccg gggatgcgcc agcagcgcat gcaccgagtg ttcaagaatg
    66541 gtttgattac cgattgagag atattgctta ggacattccg tttgcattcg acggccaaat
    66601 ccggccgccg gaaccacggc gcaaacatcc aaatgagtgg ttgccatgtt aattcccggg
    66661 ctgatttatc gattgttttg ccccgcagac tgtgcgcgct tcgacgcgtc aggcaccaga
    66721 cgataaaaag tttcgcccgg cctggtcatg ctgagttcat tacgcgcacg ctcttcgagc
    66781 gcctcctggc cgccattgag atcgtcaatt tcggcaaaaa gttgatcgtt tcgcgcttta
    66841 agtttcgcgt ttgtagcttg ctgtgccgcc acatcatcat tgacgcgggt atagtcatgt
    66901 ataccgttct taccgaacca cagcgaatac tgtagccaga ccagaatagc cagcaacagc
    66961 agcgttagtt tacccatcct gccccctgaa aaacggcatc atcatcccat gcatccgaag
    67021 acgactctac atcctctgtt ggggataccg cgacaacgcg ggcaaatgta ccacatttgt
    67081 ccattgttac gtatacctag ggcgtgcaga acataatctc attattagtt acggtttgaa
    67141 ttatgaacag aggagacaag aaagtacaaa ttagcccagt agccacataa acagtgcgcc
    67201 aaacataatg cctactgtca ccagggtgaa aacaatactg tagcgtagct ttccgtccat
    67261 caatgaatgc agcgcaatcc ccaccactac cgcgacaggc atcagtgcca gaaagaaagg
    67321 ccaggtgtag ataaagaaga acagcgtgtt agagccataa atcaacatcg gcatcgccag
    67381 cgcaaataac caggagataa aaccgaccac ggcaccaggt agtgaccatg tggtttcttc
    67441 atcctcagta aggctgtcgt tatttgttag tgtaatgtta tggctattac gcatatttga
    67501 tcctgttact ttgacgaacc gggcatggaa acccggtggt gtctcaggat ctgataatat
    67561 cgttctgtct caacagatct aataattgct gtaccaaatt tgttactaat tgttcaccat
    67621 tgagatgaat ttctgccgat tcaggcgctt cgtaaacgga atctattccc gtaaagttgc
    67681 gcagttcacc ggcacgcgct ttcttatata agcctttggg atcgcgggct tcgcaaatcg
    67741 ccagcggcgt atcgacaaac acttcgataa agcgcccttc tcctacgcgt tcgcgaacca
    67801 tctggcgttc ggcgcggtgt ggcgagataa atgcggtcag caccaccagt ccggcttcaa
    67861 ccatcaaatt cgccacttca ccgacgcgac ggatattctc tttacgatcg gcatcgctaa
    67921 aaccgagatc gctgcataat ccgtggcgaa cattgtcgcc atccagcaga tacgtactga
    67981 cgccgagttt atgtaacgcc tcctccagcg ccccggcgac cgttgattta ccggacccag
    68041 agaggccggt aaaccacagc actacaccac gatgaccgtg gtgtagctcg cgttgttgca
    68101 cagtgaccgg atggctatgc cagacgacgt tttcgtcatg cagcgccatt atttatcccc
    68161 cagcaaatcg cgcgcgcccc agtgcggaaa gtggcgacga accagggcat tcaattccag
    68221 ttcgaatgca ctgaattcag atgacgcaac ggcggcctcg tttttcggct catgcaccat
    68281 accggcacca acagtcacgt tgctcaggcg atcgataaaa atcagcccac ccgtcaccgg
    68341 attttgttga taacgatcta acaccagcgg ctcgtcaaaa gtgagatcca cgaggccgat
    68401 cccattcagt ggcaggtttt caacttcacg ctgggtaagg ttattaatat caaccggata
    68461 gcgaatgcca tcaacacgcg cgcgcgtctt cttaccggca attttgatgt cgtaactctg
    68521 gcccggggaa agcggctgtt ccgccatcca taccacatcc accgacgcgc tcggcaccgc
    68581 cggtaacgct tcgtctgccg ccagcagcag atcgccacgg ctgatgtcga tctcatccgt
    68641 cagcaccagg gtgatcgctt ctccggcaaa ggcttcttcg cgatcaccat caaaagtcac
    68701 gatccgcgcg acgtttgatt ccacaccaga gggcagcgat ttgacacgtt gcccgacttc
    68761 cacgcgaccg gatgccagcg ttccggcgta gccacgaaaa tcgagattcg ggcgattaac
    68821 gtactgcacc gggaagcgca ttggctgggc atccaccact cgctggatct ccacggtttc
    68881 cagcacttcg agcagtgtcg gaccgctgta ccacgacata ctttcacttt gcgatgccac
    68941 gttgtcgcct tccagtgcag agagcggcac aaagcggata tccagattac ccggcagctg
    69001 cccggcaaag gtcaaataat cttcacgaat atgggtgaac gtctcttcac tgtaatccac
    69061 cagatccatt ttgttgatcg ccacgaccag atgtttgatc cccaacagtg tggagataaa
    69121 actgtgacga cgggtttgat cgagcacgcc tttacgggca tcgatcagta agatcgccag
    69181 ttcacatgtc gatgcgccag ttgccatatt gcgagtgtac tgctcgtgcc ctggggtgtc
    69241 ggcgataata aatttacgct tctcggtaga gaaataacgg taagccacgt caatggtgat
    69301 gccctgttcg cgctcagctt gcaggccgtc caccagcagt gccagatcca gcttttcgcc
    69361 ctgggtgccg tgacgcttac tgtcgttatg cagcgatgag agctgatctt cgtagatttg
    69421 gcgggtatcg tgcagcaggc gaccaatcag ggtacttttg ccgtcatcga cgctaccaca
    69481 ggtcagaaaa cgcagcaggc ttttatgttg ttgcgcaatc atccaggctt cgacgccgcc
    69541 ttcattggcg atttgttgtg caagtgcggt gttcatctta aaaatacccc tgacgttttt
    69601 tcagctccat agaccccgcc tggtcgcggt caatcacgcg gccctgacgt tcactggtgg
    69661 tagaaaccag catctcttcg atgatctccg gcagtgtttg tgcatttgac tccaccgcac
    69721 cggtcagcgg ccagcagccc agcgtacgga aacgcaccat ccgtttttta atcacttcgc
    69781 ccggttgcag gtcgatacgg ttgtcatcaa tcatcatcaa cataccgtcg cgttccagaa
    69841 ccggacgttc cgcagcgaga tacagtggca caatgtcgat attttccagc cagatgtatt
    69901 gccagatatc ctgctcggtc cagttagaga gcgggaagac gcggatgctt tcacctttgt
    69961 taatttgccc gttgtagttg tgccacagct ccgggcgctg atttttcgga tcccagcgat
    70021 ggaagcggtc acggaaagag tagattcgct ctttagcgcg ggatttctct tcatcacggc
    70081 gcgcaccacc gaaggcggca tcaaaaccgt atttgttcag cgcctgtttc aggccttcag
    70141 ttttcataat atcggtatgt ttcgcgctgc cgtgtacgaa tggattaatc cccatcgcca
    70201 cgccttccgg gtttttatgc accagcagct cgcagccgta ggctttagca gtacgatcgc
    70261 ggaactcata catctcgcgg aatttccagc cggtatcgac atgcagcaac gggaaaggca
    70321 gcgtacctgg ataaaacgcc ttgcgcgcca gatgcagcat gacgctggaa tctttaccga
    70381 tagagtagag catcaccgga tttgagaatt ctgccgccac ctcgcgaata atgtggatgc
    70441 tttccgcctc cagttgccgc aggtgagtaa gtcgtttttg agccataacc gttcctttgc
    70501 aataccgcta ttttcttgcc atcagatgtt tcgactatag ggagcgtaag agaacgaatg
    70561 aaattaccaa ttagaatgag tagttcctta acggaataac gatttggcaa agctaatatc
    70621 aaaaagtgct taaggcaccg gatttcgggc gtttaggaag atttgaaatt gttttagcgc
    70681 agcggcagtt tcatactatg gcggtaaaaa aatttgcatg gtatttaagg actcactatg
    70741 ttttccgcat tgcgccaccg taccgctgcc ctggcgctcg gcgtatgctt tattctcccc
    70801 gtacacgcct cgtcacctaa acctggcgat tttgctaata ctcaggcacg acatattgct
    70861 actttctttc cgggacgcat gaccggaact cctgcagaaa tgttatctgc cgattatatt
    70921 cgccaacagt ttcagcaaat gggttatcgc agtgatattc ggacatttaa tagtcggtat
    70981 atttataccg cccgcgataa tcgtaagagc tggcataacg tgacgggaag tacggtgatt
    71041 gccgctcatg aaggcaaagc gccgcagcag atcatcatta tggcgcatct ggatacttac
    71101 gccccgctga gcgatgctga cgccgatgcc aatctcggcg ggctgacgtt acaaggaatg
    71161 gatgataacg ccgcaggttt aggtgtcatg ctggaattgg cagaacgcct gaaaaatacg
    71221 cctaccgagt atggtattcg atttgtggcg accagcggcg aagaggaagg gaaattaggc
    71281 gctgagaatt tactcaagcg gatgagtgac accgaaaaga aaaatacgct gctggtgatt
    71341 aatctcgata acttaattgt tggcgataaa ttgtatttca acagcggtgt aaaaacccct
    71401 gaagcagtaa ggaaattaac gcgcgacagg gcgctggcaa ttgcgcgcag tcacggaata
    71461 gccgcaacga ccaatccggg gttgaataaa aattatccga aaggcactgg gtgttgtaat
    71521 gacgcagaaa tattcgacaa agcgggcatt gctgtacttt cggtggaagc gactaactgg
    71581 aatcttggga ataaggatgg ttatcagcaa cgcgcaaaaa cagccgcatt ccctgcggga
    71641 aatagctggc atgacgtaag actggataat caacagcata ttgataaggc acttcctgga
    71701 agaatagaac gtcgctgccg tgacgttatg cggataatgc taccgttggt gaaggagctg
    71761 gcgaaggcgt cttgatgggt ttgaaaatgg gagctgggag ttctaccgca ggggcgggga
    71821 attctaagtg atatccatta tcgcatccag tgcgcccggt ttatccccgc tggcgcgggg
    71881 aacacactaa gcatacataa ctgtttttaa acaaatttat tccgcatcaa caatctacca
    71941 actaaattaa aacatttcct tatttttaaa gaacggataa cttattgatt atcaacagga
    72001 agaaaagaaa ccaaacgtaa cccatccaaa tccaccggaa tacgtctgtt ttctccccag
    72061 gtctgaaatt caaaacccga ctcggtattg gtcgcccagg ccatcaccac atttccgcaa
    72121 ccagccagtt gggtaatttg ctgccagatc atctcccgaa tacgttttga tgtatcacca
    72181 acatacacac cggcacgcac ttccagtagc cagattgcga gccgtccacg taagcgtggc
    72241 gggacatttt ctgtaacaac cacgaccatg ctcatcagcc gcgtcctcga tgaccgctat
    72301 cgcccaacgt ttcaggttcg gggatggctg gcggtaacat atccggcgca ggttgtggcg
    72361 gttcaatttc acctgcggca aggacttcct caattaacgg tattaatttg cccgttaact
    72421 tagtgctacg gaaaatatca cgacaggcta atctgacttc tttatcaggt tctgcgggtt
    72481 gcctcgccgc tatttcaaat gcctttggta caaccgaatc aaatttaatg atatcggcta
    72541 tgtcataaac aaatgaaagc ggtttgccac tatggataaa cccaatagcg ggcgcatatc
    72601 ccgcggctaa tactgccgct tcagatatac cgtacagaca tgatgtagca gcactgatgc
    72661 agcgattcac aacatcgcct ttttcccagt ctttaggatc gtatttgcga ccattccatt
    72721 tcacaccata ttgtttcgcc agtaatgcat acgtctggcg aacgcgagat ccctcaattc
    72781 cacgtagctg ctccactgaa cggcgagctg gcggtggctc acgaaaacgt aattcataca
    72841 ttttgcgcac caccttcaga cgtagatctt ccgttaaagc cagctttgcc tggtagagta
    72901 acttatcagc acgcgcccca ccgggttgtc cggaagagta gacgcgaaca cccgcttcac
    72961 cgacccagac ctgtagcgtc cccaccgtgg cggccagatg caccgccgcg tgggaaactc
    73021 tcgttcccgg ttcgagcata atgcaggcga ccgatcccac cggaatgtgc gtgcggatcc
    73081 cggttttatc gatcagcacg aaagcgccgt ccagtacgtc gatttgcccg tactggagga
    73141 agatcataga ggtgcgatct tttaacggga tcgggctcag cggtacaaac gtcacgcctc
    73201 tgctccgggt ttgatcagca tcagaccaca gccgaacgcg cggcttttgc catacccctg
    73261 actgagacgt tgcagaaata acccgggatc ggtgaccgta agcatccccg tataatccac
    73321 gctactgaac tggatcagtt gccgggagtt ttcccgccgc agttgctgtt gtcggtaggc
    73381 atcaaccgag atatccagca gtgtaaaacc acttctctcc ccctgcgctg ccagccagtc
    73441 cagcgccgcc tgttgttgat gcaaccagac atcacttcct tccgcctgcc ccctcacctg
    73501 ccgtttcgcc tccatcagca gatcgtggcg cttgcccgct ttacagattg ttggattcgc
    73561 ccgcaggttg aaacaaagtt gttgtccggt acacagctcg ggcgcaaatg accggcattc
    73621 tatggtgaac gtatcacttt ccgccgggcg ttcctgcgac agtacaaaaa agcgaaacgc
    73681 gccctggagt tcttcccgac gataaagaaa ttgcctttct ttgccgctag ggaagagatc
    73741 ccacagccac tgatgcatca catattcacc gcgatccacc agatgcagca actgcgcagg
    73801 cgaaagctgg ccggtatgta aggttattct tgagaggtac atggttcctc cttgctgagc
    73861 cacggcccct gattgacggt gcgttcccca aacagccact gctgacgatt taaaggaaca
    73921 tcccggcggc gtaatatttt gctcgcgacc aggccgtcgt gtttcccttc ccaccagcat
    73981 tcatcctgaa gtttcgggag tgaaactttc agtttatgga aatgatcctg atactgttgg
    74041 tatgcattac ataaggcatc acacgcgttg ccttcgagca gtaacggcgc aagaggtaat
    74101 gccagcggat gactttttcg ccccagataa agcggaaaaa ctggatggcg taaaccgtcc
    74161 tgcaactgtt cgaggctgta aggcgcatcg gctgttgttg ccaccgccac catccaccag
    74221 gcatcggtgt agtagtcgcg ccgggagata atcgcgctca aaagctcagg gtcgctcaac
    74281 tcttcgcgac ggctgaaata acgtgcttta cgcacctctt ttggcatctg gaccgtgtga
    74341 taatcccgtg cccagcgcgg gttacggctg gcgcaaacca ccagtgaata gtggcgatta
    74401 aacgcgttta agcgttcggt atcatcacgc cggatcccta ccccggcagc cagcagcccc
    74461 agcaatgctg agagcgaagg cagttcatgg gtatgacgca cttcgccggg ggcatcgacg
    74521 ccccaggatg ccatcggccc atgaagctga aaaatcagat attggctcat aagccgcccc
    74581 ttacgcgcag ataaagtcca gcacgtcctt catgcttccc tgtttgttca tcacgtcaaa
    74641 acttgcgtaa tcggtcttct gttcgtagac cgtattcata ttttcgcgaa gagttgtaat
    74701 acgctgcacc gccacctcta actgacgggt gccattaatg ggttcataga aagctgccgc
    74761 cagagaacgc ggttgatcgg tgcctttttc tgccagcgcc caggaggcat aagcccggct
    74821 ggcaaagctg ttttgtttac cggttgggga gactttaagc gcggcttccg taaaggcgcg
    74881 tatggtctga ttagctaacg cttcgtcacc gccgaggttt tctaccagca gatctttatc
    74941 aatgcagata agatataggt gtagaacagc gcagaaccga atccggtttc atctacatga
    75001 ccggcaccgg catcttcaga agcctggcgt aaatcatcta cggcggtgaa aaaatcattt
    75061 tcgacaatcg tttcactgac accaaacgca tgcgcgacct ggcaggcggc ttctacatta
    75121 aacccgggtt ttttcgccag catacgacca aacatagcga tatctaccgc catacggtct
    75181 ttacgtaaca aagcgagatc tttctctttt ggcgcgcgct tttcttctgc cagttgatgg
    75241 gccagcgctt ttacggcgtc aaattctgcc gggctgatat ggacgagctg ttcagtttcg
    75301 gcgctagtga gcggatcttt tggttttttg tcgttttttt gttttttgtc ttttttggct
    75361 ttcccaagat aatcggctat ctctactgcc cattcgatgg cttttttatc ttcgattcct
    75421 ttctcaatca ggatagttgc cgcctcacgc gcaatacgcc cgctacgaac accaatatgg
    75481 cccgccagcg cctgttcaaa aagttcagaa gtgcgccaag cacgcttcag actttgcgag
    75541 gaaacgcgca gacgcgttgc tccacccaga atcacagttt tcggagagcc ggaatcatca
    75601 cggttaagat tggcagcagg gtaagcggtt aacaaatgaa gctgaataaa tgttgtcatg
    75661 agatagtcct ttattaattt tgttcgttat cggcgtcgcc agcctggtaa tattccagcg
    75721 cccagcgccc agcgcccagc gcccagcgcc cagcgcccag cggatacgga taaattctgt
    75781 tggtcgctgc tggcggcggt gatgattgag caggtcatcg ctctcctggc accagcggaa
    75841 gaccccctct tctagagagt caagattgac ggaaccgttt aataatttga ccgcacggcg
    75901 taactgccgc aataaatcat ccggcgtttt tactgccaac aaacgagtaa accgcccctt
    75961 tttcattacc gccgccagtt gcgcggcaaa aggctgccgt tcgtcaatag ctttaacatt
    76021 ggcgctaact gctgctatca gcgctagtgc ggtgatacgc cactcgggtt catcctgcca
    76081 ctttatttgt ctgttcttaa gaaacaggcg aaatccatcc gtcagacaaa catcattaac
    76141 cgtcgtacta cgccgcagac tggcacgctc gccgcgttta tcctgcaact cttcatgcca
    76201 tttacgcagc gcaactttat gctcatcttt tacaatactc attcagcagc ctcctgcttt
    76261 ttctccctgg cggcgttagc attttgcttc tccgctgatg ttgtaaaata tttcttgcgt
    76321 gcggtcatga cgcgttccaa atcaacgggc tcatatggat tggtaaagac acgatcgtca
    76381 aaatcctgac gcgcgaataa ccacatttcc ttttgccatt tactgagtaa ttcgtccgga
    76441 tcctgacctt cttcaatttt gcgcactaat ctcaggaatc gatgctgagt tttgttccag
    76501 aagtcaatat ccacaaaacc gaaatcaagc tttgtggttt tcttctcaga gaaccatgct
    76561 tctttcaacg ctcggtgtaa caagcttaga atgtgtgatg ccgcttgcgc tgccagacgc
    76621 aacttaggta ttaggtcttc ttttttgttt aacaacagcg ggaaatggtg ttcataccaa
    76681 caacgaacct tcatatcttc aaaatcaaaa ccaaatcccc ataagcccac ccttgtctgc
    76741 tttagattgc tggcattcaa aagtttcacg acctgtgcgg ggagttcagt attgtttttt
    76801 gagttaccta cctctatgag gcctaaccag tcgcgccaga ttaaaccacc aggttgtggt
    76861 ttaactgagt aaaaatctcc accctcttta agcggcagac ggtaaggtgt tagaggatgg
    76921 cgccacatga cgtattgaac accatagttt ttgagtgaca tcaagcccaa aagagcatcg
    76981 ctctgcctac cgcaaatgtc gcagttacct attgaggttg tcttaaaatc aatacgtata
    77041 cgtcgtggca ttccccagta ggcctgaagt ttattgactt gttcatccgt taccacagca
    77101 ccgtccagtt cgctggtacg cgtcggtgca agccaaggaa agaccaggtc atcaaaggtt
    77161 tttggtaaag gtaaatcggc ttcatcttgc ggcattacgt ttagccacag ctttcgccac
    77221 aaaggggttt gttgattgcc ctgatactcc agcaattcta taagtgtcgt cagaggccct
    77281 ccgccacgta gcccaggata gtaaccgcgt ccacctatag gtgcattcaa ctggattgaa
    77341 aaaagcgcta aaggcacaca atgcaggcac agatgctgag ttgtgtctcg cttaataaaa
    77401 tggtctgtat ttcgttcttt tgtttgtttt cctggtgcgt caggaagaag cgaagcaata
    77461 aaagttgcct taacttttaa ttcatcaaaa tcctgcataa atgaagggga atctggccca
    77521 aactgaaaag catgttctaa agacagcaat gcttccctta gcttttcagc ttccagtccg
    77581 tcttcccaga tatcatccca actacgttga tcttttggcg cgaagctggt ttgtagtagc
    77641 cccagcaaaa actgccaggc cgccccctgg agatctgccc gcggcgcagc gatatcgaca
    77701 acattttcat cagccagatc gactggtgcc agtttgcctg tcgttccgtc tttaaaacga
    77761 acgggcaacc acggggttgt cagaagtgaa aacgagttca tacgcatcct ctcgtaaaaa
    77821 agaccatccc aggtcggttg tccatccttc catccttttc tgtatatcaa ctattcagag
    77881 agtcttgtcg cagacatctc aaccaacctt gccaatcaat ccctccctgg ccgaataccc
    77941 gcaactttcg tcatcggtga ctaaaatcac gtttgccatt tccggatctt gccgctgttc
    78001 aacgcaccac tgcctgaacg catccccttc cagtaaagaa aactcatccc gatgtttttt
    78061 ccaccagctt cggcgcactc tgacaacgct catttcccat gcgtgagcac cggtggcata
    78121 aggcttcacc acaccgtcaa tacaggtagc cagccacagg gaaacagact cttcagccag
    78181 acgtgtcgac agtttttccg gaaggtaatc gttgatattg gcggcatagc cgagcctgaa
    78241 gttcagcaca tactttttag cccttgcgcg atcacagtaa tatttgccca cttgctcctg
    78301 ctcgctgcgg gcaaatcctt ccggcattac cacgtcctca ccgtaaactg attcaataag
    78361 aagccgggct gcgtgcggca tctgaatagc gccttgctca cgcagcacac gctgcgtcag
    78421 ccagattcgc ccatgatcgg gatagacata tgcactgtta cgcatggcac tgccgaacca
    78481 ttcgtcacca ggagcgtcat cccagacggg ggccagaatc agcaattcag ggggggaacg
    78541 ctcgtctttt ccgtcacgct ttaactgacc attaatatcg cggatatgcc gctgtaatcg
    78601 ccccgctcgc tggattagca aatcaatggg ggccaggtcg gagatcattt cgtccaggtc
    78661 aatatccacg ctttgttcaa ttacttgtgt acaaacaatg acttgagacg ctctctgtaa
    78721 actacaatat ttaccaaagc gtgccagcgt ttccgtttca attcgctggc gatcgctaaa
    78781 agcaaagcgg ctatgaaaaa gtgaaaggct ggaagcagga atgacgccgc gggcaagcag
    78841 ctgacgatac acctgaatag cgtcatcaac agaattccga atccaggcga tgcatttccc
    78901 ctgacttacc gccgattcga tacgcgcaat acactcttgt tcactatgga gccaacccac
    78961 gctcacgcta cgttcaactt ctttgcgcgt cgctacccgg tgcgaatgta catcggtttt
    79021 cgtgacatgc gtcagccagg ggtaatcatc ttttcccagg agtggggctt cttgctggcc
    79081 ctctgcacca cgcgcaaagg cggcgacgag tttgtcgcgc tgctgttgag ataacgtagc
    79141 agaaagcaaa ataacgctgt ttccgccacg cgcctgccgc tcgatcagcc cttcaagaat
    79201 gcacgacata taagcgtcac aggcgtggat ctcatcagcc agcaggattt tgttactcag
    79261 ccccagaagc cgcagattat tatgtttaaa cggcatcact gccatcatcg cctgatccag
    79321 ggtgccgacg ccaatttcag ccagcaacgc cttcttgtta ctgtcggcaa actaggccgc
    79381 acaaccctgg ctgaaagctt gttcatccgg ttcttctgac ccgattaaat caccggacca
    79441 gagtgattca ttaa
//
LOCUS       DAJVUK010000004        69363 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.004, whole genome shotgun sequence.
ACCESSION   DAJVUK010000004 DAJVUK010000000
VERSION     DAJVUK010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 69363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 69363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..69363
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.004"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..790
                     /locus_tag="OQQ57_000270"
     CDS             <1..790
                     /locus_tag="OQQ57_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1955151.1"
                     /translation="DSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQT
                     GVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGD
                     FHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITY
                     DCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQ
                     NGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR"
     gene            complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="OQQ57_000271"
     CDS             complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="OQQ57_000271"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HCS1955152.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALVAEIHGVKKNA
                     LYKYALEQQG"
     gene            1757..3784
                     /gene="lpoA"
                     /locus_tag="OQQ57_000272"
     CDS             1757..3784
                     /gene="lpoA"
                     /locus_tag="OQQ57_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoA"
                     /protein_id="HCS1955153.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
                     LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
                     QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNIGTQPVAAQVAAADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQPVP
                     VSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEEL
                     LKSNTPLNVLVLNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSS
                     LGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATTDSG
                     MTTNNPTLQTMPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGAMLYAS
                     SRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDA
                     WSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
     gene            3742..4137
                     /locus_tag="OQQ57_000273"
     CDS             3742..4137
                     /locus_tag="OQQ57_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HCS1955154.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVN
                     ERGGEIDLIMREGWTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            4157..4747
                     /gene="diaA"
                     /locus_tag="OQQ57_000274"
     CDS             4157..4747
                     /gene="diaA"
                     /locus_tag="OQQ57_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HCS1955155.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
     gene            4757..5332
                     /gene="yraP"
                     /locus_tag="OQQ57_000275"
     CDS             4757..5332
                     /gene="yraP"
                     /locus_tag="OQQ57_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HCS1955156.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(5446..6486)
                     /locus_tag="OQQ57_000276"
     CDS             complement(5446..6486)
                     /locus_tag="OQQ57_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCS1955157.1"
                     /translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQHYYGKAFTA
                     AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR
                     TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT
                     LVFMGFVLGWGFAAICLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEARSGFFS
                     RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVI
                     PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV
                     SGVIVGGLALLF"
     gene            complement(6559..7194)
                     /locus_tag="OQQ57_000277"
     CDS             complement(6559..7194)
                     /locus_tag="OQQ57_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HCS1955158.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTEPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSSSELRKRAE"
     gene            7322..7840
                     /gene="yhbO"
                     /locus_tag="OQQ57_000278"
     CDS             7322..7840
                     /gene="yhbO"
                     /locus_tag="OQQ57_000278"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HCS1955159.1"
                     /translation="MSKKIAVLISDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(7820..8263)
                     /locus_tag="OQQ57_000279"
     CDS             complement(7820..8263)
                     /locus_tag="OQQ57_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HCS1955160.1"
                     /translation="METLITISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
                     HRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            8314..8616
                     /gene="yhbQ"
                     /locus_tag="OQQ57_000280"
     CDS             8314..8616
                     /gene="yhbQ"
                     /locus_tag="OQQ57_000280"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HCS1955161.1"
                     /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
     gene            complement(8603..9106)
                     /locus_tag="OQQ57_000281"
     CDS             complement(8603..9106)
                     /locus_tag="OQQ57_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1955162.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(9100..9624)
                     /locus_tag="OQQ57_000282"
     CDS             complement(9100..9624)
                     /locus_tag="OQQ57_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HCS1955163.1"
                     /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADVSDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            9833..10813
                     /locus_tag="OQQ57_000283"
     CDS             9833..10813
                     /locus_tag="OQQ57_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCS1955164.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPNIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            10822..11700
                     /locus_tag="OQQ57_000284"
     CDS             10822..11700
                     /locus_tag="OQQ57_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCS1955165.1"
                     /translation="MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELTSMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLLLTANS
                     DCNGYWRRLAGLELQA"
     gene            11906..12913
                     /locus_tag="OQQ57_000285"
     CDS             11906..12913
                     /locus_tag="OQQ57_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase-like monooxygenase"
                     /protein_id="HCS1955166.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(13031..14275)
                     /gene="mtr"
                     /locus_tag="OQQ57_000286"
     CDS             complement(13031..14275)
                     /gene="mtr"
                     /locus_tag="OQQ57_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HCS1955167.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(14429..16318)
                     /gene="deaD"
                     /locus_tag="OQQ57_000287"
     CDS             complement(14429..16318)
                     /gene="deaD"
                     /locus_tag="OQQ57_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DeaD"
                     /protein_id="HCS1955168.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR
                     FGGDA"
     gene            complement(16311..16391)
                     /gene="yrbN"
                     /locus_tag="OQQ57_000288"
     CDS             complement(16311..16391)
                     /gene="yrbN"
                     /locus_tag="OQQ57_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HCS1955169.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(16498..17382)
                     /gene="nlpI"
                     /locus_tag="OQQ57_000289"
     CDS             complement(16498..17382)
                     /gene="nlpI"
                     /locus_tag="OQQ57_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HCS1955170.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDSDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(17491..19626)
                     /gene="pnp"
                     /locus_tag="OQQ57_000290"
     CDS             complement(17491..19626)
                     /gene="pnp"
                     /locus_tag="OQQ57_000290"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HCS1955171.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRSVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSREGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(19874..20143)
                     /gene="rpsO"
                     /locus_tag="OQQ57_000291"
     CDS             complement(19874..20143)
                     /gene="rpsO"
                     /locus_tag="OQQ57_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HCS1955172.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(20292..21236)
                     /gene="truB"
                     /locus_tag="OQQ57_000292"
     CDS             complement(20292..21236)
                     /gene="truB"
                     /locus_tag="OQQ57_000292"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HCS1955173.1"
                     /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICFGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITIYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(21236..21637)
                     /gene="rbfA"
                     /locus_tag="OQQ57_000293"
     CDS             complement(21236..21637)
                     /gene="rbfA"
                     /locus_tag="OQQ57_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HCS1955174.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(21801..24449)
                     /gene="infB"
                     /locus_tag="OQQ57_000294"
     CDS             complement(21801..24449)
                     /gene="infB"
                     /locus_tag="OQQ57_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HCS1955175.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKN
                     AQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSS
                     DYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRG
                     GKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAM
                     ATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHV
                     DHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARG
                     AQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQ
                     YGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFL
                     DKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLS
                     GVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVN
                     IVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNV
                     RADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKS
                     PKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIG
                     VKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(24474..25961)
                     /gene="nusA"
                     /locus_tag="OQQ57_000295"
     CDS             complement(24474..25961)
                     /gene="nusA"
                     /locus_tag="OQQ57_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HCS1955176.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLELGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGIDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGVTDEKAGALIMAARNICWFGDEA"
     gene            complement(25989..26441)
                     /gene="rimP"
                     /locus_tag="OQQ57_000296"
     CDS             complement(25989..26441)
                     /gene="rimP"
                     /locus_tag="OQQ57_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HCS1955177.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(26648..26724)
                     /locus_tag="OQQ57_000297"
     tRNA            complement(26648..26724)
                     /locus_tag="OQQ57_000297"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26688..26690),aa:Met,seq:cat)
     gene            27072..28415
                     /gene="argG"
                     /locus_tag="OQQ57_000298"
     CDS             27072..28415
                     /gene="argG"
                     /locus_tag="OQQ57_000298"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HCS1955178.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSNDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENMENKGQ"
     gene            complement(28423..30048)
                     /locus_tag="OQQ57_000299"
     CDS             complement(28423..30048)
                     /locus_tag="OQQ57_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HCS1955179.1"
                     /translation="MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFF
                     VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP
                     DEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ
                     FAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVR
                     DTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVP
                     LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETV
                     YVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDAC
                     YDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHV
                     PMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDS
                     RVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG"
     gene            complement(30507..30593)
                     /locus_tag="OQQ57_000300"
     tRNA            complement(30507..30593)
                     /locus_tag="OQQ57_000300"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30557..30559),aa:Leu,seq:gag)
     gene            complement(30608..30940)
                     /gene="secG"
                     /locus_tag="OQQ57_000301"
     CDS             complement(30608..30940)
                     /gene="secG"
                     /locus_tag="OQQ57_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HCS1955180.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(31168..32505)
                     /gene="glmM"
                     /locus_tag="OQQ57_000302"
     CDS             complement(31168..32505)
                     /gene="glmM"
                     /locus_tag="OQQ57_000302"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HCS1955181.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIISKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(32498..33346)
                     /gene="folP"
                     /locus_tag="OQQ57_000303"
     CDS             complement(32498..33346)
                     /gene="folP"
                     /locus_tag="OQQ57_000303"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCS1955182.1"
                     /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWLSVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(33436..35370)
                     /gene="ftsH"
                     /locus_tag="OQQ57_000304"
     CDS             complement(33436..35370)
                     /gene="ftsH"
                     /locus_tag="OQQ57_000304"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HCS1955183.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMIEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(35470..36099)
                     /gene="rlmE"
                     /locus_tag="OQQ57_000305"
     CDS             complement(35470..36099)
                     /gene="rlmE"
                     /locus_tag="OQQ57_000305"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HCS1955184.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            36225..36518
                     /gene="yhbY"
                     /locus_tag="OQQ57_000306"
     CDS             36225..36518
                     /gene="yhbY"
                     /locus_tag="OQQ57_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HCS1955185.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(36675..37151)
                     /gene="greA"
                     /locus_tag="OQQ57_000307"
     CDS             complement(36675..37151)
                     /gene="greA"
                     /locus_tag="OQQ57_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HCS1955186.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            37399..38832
                     /gene="dacB"
                     /locus_tag="OQQ57_000308"
     CDS             37399..38832
                     /gene="dacB"
                     /locus_tag="OQQ57_000308"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HCS1955187.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMIATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVIPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(38872..40044)
                     /gene="cgtA"
                     /locus_tag="OQQ57_000309"
     CDS             complement(38872..40044)
                     /gene="cgtA"
                     /locus_tag="OQQ57_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HCS1955188.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(40060..41025)
                     /locus_tag="OQQ57_000310"
     CDS             complement(40060..41025)
                     /locus_tag="OQQ57_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1955189.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(41152..41409)
                     /gene="rpmA"
                     /locus_tag="OQQ57_000311"
     CDS             complement(41152..41409)
                     /gene="rpmA"
                     /locus_tag="OQQ57_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HCS1955190.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(41430..41741)
                     /gene="rplU"
                     /locus_tag="OQQ57_000312"
     CDS             complement(41430..41741)
                     /gene="rplU"
                     /locus_tag="OQQ57_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HCS1955191.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            42000..42971
                     /gene="ispB"
                     /locus_tag="OQQ57_000313"
     CDS             42000..42971
                     /gene="ispB"
                     /locus_tag="OQQ57_000313"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HCS1955192.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
     gene            43200..43478
                     /gene="sfsB"
                     /locus_tag="OQQ57_000314"
     CDS             43200..43478
                     /gene="sfsB"
                     /locus_tag="OQQ57_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HCS1955193.1"
                     /translation="MESNFIDWHPPDIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(43526..44785)
                     /gene="murA"
                     /locus_tag="OQQ57_000315"
     CDS             complement(43526..44785)
                     /gene="murA"
                     /locus_tag="OQQ57_000315"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HCS1955194.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIKRVKGE"
     gene            complement(44840..45094)
                     /gene="ibaG"
                     /locus_tag="OQQ57_000316"
     CDS             complement(44840..45094)
                     /gene="ibaG"
                     /locus_tag="OQQ57_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417657.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HCS1955195.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(45254..45547)
                     /gene="mlaB"
                     /locus_tag="OQQ57_000317"
     CDS             complement(45254..45547)
                     /gene="mlaB"
                     /locus_tag="OQQ57_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HCS1955196.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
                     SRVSRVDTGGLALLLQLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
     gene            complement(45547..46182)
                     /gene="mlaC"
                     /locus_tag="OQQ57_000318"
     CDS             complement(45547..46182)
                     /gene="mlaC"
                     /locus_tag="OQQ57_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HCS1955197.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(46201..46752)
                     /gene="mlaD"
                     /locus_tag="OQQ57_000319"
     CDS             complement(46201..46752)
                     /gene="mlaD"
                     /locus_tag="OQQ57_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HCS1955198.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAPAAAPGNNETTEPVGTTK"
     gene            complement(46757..47539)
                     /gene="mlaE"
                     /locus_tag="OQQ57_000320"
     CDS             complement(46757..47539)
                     /gene="mlaE"
                     /locus_tag="OQQ57_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HCS1955199.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(47547..48356)
                     /gene="mlaF"
                     /locus_tag="OQQ57_000321"
     CDS             complement(47547..48356)
                     /gene="mlaF"
                     /locus_tag="OQQ57_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HCS1955200.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            48566..49543
                     /locus_tag="OQQ57_000322"
     CDS             48566..49543
                     /locus_tag="OQQ57_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HCS1955201.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            49557..50543
                     /gene="kdsD"
                     /locus_tag="OQQ57_000323"
     CDS             49557..50543
                     /gene="kdsD"
                     /locus_tag="OQQ57_000323"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HCS1955202.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            50564..51130
                     /gene="kdsC"
                     /locus_tag="OQQ57_000324"
     CDS             50564..51130
                     /gene="kdsC"
                     /locus_tag="OQQ57_000324"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HCS1955203.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSELLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            51127..51702
                     /gene="lptC"
                     /locus_tag="OQQ57_000325"
     CDS             51127..51702
                     /gene="lptC"
                     /locus_tag="OQQ57_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HCS1955204.1"
                     /translation="MSKARRWVTIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            51671..52228
                     /gene="lptA"
                     /locus_tag="OQQ57_000326"
     CDS             51671..52228
                     /gene="lptA"
                     /locus_tag="OQQ57_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HCS1955205.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            52235..52960
                     /gene="lptB"
                     /locus_tag="OQQ57_000327"
     CDS             52235..52960
                     /gene="lptB"
                     /locus_tag="OQQ57_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HCS1955206.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            53008..54441
                     /gene="rpoN"
                     /locus_tag="OQQ57_000328"
     CDS             53008..54441
                     /gene="rpoN"
                     /locus_tag="OQQ57_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HCS1955207.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTSETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
                     DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            54464..54751
                     /gene="hpf"
                     /locus_tag="OQQ57_000329"
     CDS             54464..54751
                     /gene="hpf"
                     /locus_tag="OQQ57_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HCS1955208.1"
                     /translation="MQLNITGNNVEITEALREFVRAKFAKLEQYFDRINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            54869..55360
                     /gene="ptsN"
                     /locus_tag="OQQ57_000330"
     CDS             54869..55360
                     /gene="ptsN"
                     /locus_tag="OQQ57_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HCS1955209.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            55406..56260
                     /gene="rapZ"
                     /locus_tag="OQQ57_000331"
     CDS             55406..56260
                     /gene="rapZ"
                     /locus_tag="OQQ57_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HCS1955210.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            56257..56529
                     /gene="npr"
                     /locus_tag="OQQ57_000332"
     CDS             56257..56529
                     /gene="npr"
                     /locus_tag="OQQ57_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HCS1955211.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            56743..57375
                     /gene="yrbL"
                     /locus_tag="OQQ57_000333"
     CDS             56743..57375
                     /gene="yrbL"
                     /locus_tag="OQQ57_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HCS1955212.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
                     RELKYYAYLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
                     YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHHISESEVIPVVCDNIGESTLI
                     PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(57372..58100)
                     /gene="mtgA"
                     /locus_tag="OQQ57_000334"
     CDS             complement(57372..58100)
                     /gene="mtgA"
                     /locus_tag="OQQ57_000334"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HCS1955213.1"
                     /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV
                     MVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHRGFDVASIEKA
                     LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRS
                     RQAWILRQMYQLGGEPFMQQHQLD"
     gene            complement(58097..58750)
                     /gene="elbB"
                     /locus_tag="OQQ57_000335"
     CDS             complement(58097..58750)
                     /gene="elbB"
                     /locus_tag="OQQ57_000335"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HCS1955214.1"
                     /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
                     QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
                     NFATLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
     gene            complement(58980..61316)
                     /gene="arcB"
                     /locus_tag="OQQ57_000336"
     CDS             complement(58980..61316)
                     /gene="arcB"
                     /locus_tag="OQQ57_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HCS1955215.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(61412..62341)
                     /locus_tag="OQQ57_000337"
     CDS             complement(61412..62341)
                     /locus_tag="OQQ57_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HCS1955216.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE"
     gene            63016..67476
                     /gene="gltB"
                     /locus_tag="OQQ57_000338"
     CDS             63016..67476
                     /gene="gltB"
                     /locus_tag="OQQ57_000338"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HCS1955217.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLNVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            67489..68907
                     /gene="gltD"
                     /locus_tag="OQQ57_000339"
     CDS             67489..68907
                     /gene="gltD"
                     /locus_tag="OQQ57_000339"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit GltD"
                     /protein_id="HCS1955218.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEQFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENKDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            69091..>69363
                     /locus_tag="OQQ57_000340"
     CDS             69091..>69363
                     /locus_tag="OQQ57_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955219.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMR"
BASE COUNT        16946 a        18842 c        17249 g        16326 t
ORIGIN      
        1 tgacagcctg gatattaaaa ccacattaca ggcaaacgac attccaggac tcacaaccga
       61 ccaggttgtc tctgttaaca cccgattcac acagataaaa agcagcaccg tatattctgc
      121 tgcaacccaa acgggtgttt gccagggtga cacgtctcgt tatggacccg ttaatattgg
      181 tgcaaatacc acctttaccc tgtatgtcac caagccattt ctcggctcga tgaccattcc
      241 gaaaacggat attgccgtca ttaaaggcgc gtgggtcgat ggaatgggaa gcccgtctac
      301 aggtgacttc catgatttag tcaagttatc gattcaggga aatctcaccg ccccacagtc
      361 gtgcaaaatt aatcagggcg atgttattaa ggttaatttt ggattcatca atggtcagaa
      421 gtttaccacc cgcaatgcca tgccagacgg ttttactcca gtagactttg atatcactta
      481 tgactgtggt gatacttcaa agattaaaaa ctcgttgcaa atgcgcatcg acggtacaac
      541 tggggtagta gaccagtaca acctggtcgc caggcgaaga agttcagaca atgtgcccga
      601 tgtcggtatt cgtattgaaa atctcggcgg cggagttgca aatattcctt ttcagaacgg
      661 tatccttccc gttgatcctt ccgggcatgg caccgtcaat atgcgcgcct ggccagttaa
      721 tctggtcggt ggtgagctgg aaacaggaaa atttcagggc acagccacca ttaccgtcat
      781 ggtgcggtaa aagaagacgt tgcgttttga ttaacgcaac gcttcggcac tgttacccct
      841 gctgctccag cgcatactta tacagcgcat ttttcttcac gccatgaatt tctgcgacca
      901 gcgccgccgc ttttttcagc ggcagttctg cctgtagcag cgccagcgtg cgcagggcat
      961 cggcgggtaa gtcttcttcc tgtgctttat gaccttcgac aatcagcacc atttcgcctt
     1021 tgcgacggtt ttcatcttcc tttacccacg ccagcagttc gccaacgggc gcgccgtgaa
     1081 tggtttccca ggttttggtc agctcacgcg ccagaaccac gtagcgggat tcgcctaata
     1141 ccgcaacgat atcttccagg ctatctaaca gacggtgggt ggattcataa aaaatcagcg
     1201 tgcgcggctc cgcttcaatg gcttttagcg catcacggcg gccttttgat ttggcaggta
     1261 aaaagccttc gtaacagaaa cggtcagagg gtaaacccgc ggcgcttaac gcagtgatag
     1321 cagcacacgg cccgggtagc ggcaccacgc gaatccccgc ttcacggcag gtacgcacca
     1381 gatggtagcc aggatcgtta attagcggcg ttccggcatc ggaaaccagc gcaatgtttt
     1441 gcccctcttg cagcttcgcc agcagcgttt cggctttttg ttgttcgtta tggtcgtgca
     1501 gcgcaaacaa ccgggcatta atcccaaaat gttgcagcaa taaaccggtg tgacgagtat
     1561 cctcggcggc aatcagatca acggcctgta atacctctaa cgcacgctgg gtgatatccg
     1621 ccagattgcc gattggcgtc ggtacaatgt aaagctggcc ctgagaatta tccgccgatt
     1681 ggtgttgttt cattgtgtcg tccgtattgc cgatttaata ttgagcattg cgtaaaaaaa
     1741 tatcactgga tacattatgg taccctcaac attttctcgt ttgaaagccg cgcgttgtct
     1801 gcctgttgtt ctggcagccc tgattttcgc cggttgtggc acccatactc ccgatcagtc
     1861 cactgcttat atgcagggca cggcgcaggc tgattctgcc ttttatcttc agcagatgca
     1921 gcaaagctct gatgatacca ggatcaactg gcaattactc gccattcgtg cactggtgaa
     1981 agaaggtaaa accgggcagg cggttgagtt gtttaaccaa ctaccgcaag aactgaacga
     2041 ttctcagcgt cgcgagaaaa cactgctggc ggtagagatt aaactggcgc agaaagattt
     2101 tgctggcgcg caaaacttgc tggcgaaaat cacacctgcc gatttagaac aaaaccagca
     2161 agcgcgttac tggcaggcaa aaatcgatgc cagccagggg cgtccttcca ttgatttact
     2221 gcgcgcgtta attgctcagg aaccgctgct cggcgcgaaa gaaaaaaagc agaatattga
     2281 tgccacctgg caggcgctct cctccatgac tcaggaacag gcgaatacgc tggtgatcaa
     2341 cgccgacgaa aatattctgc aaggctggct ggatctgcag cgcgtctggt ttgataaccg
     2401 taacgatccc gatatgatga aagccgggat cgccgactgg cagaaacgtt atccgaacaa
     2461 tccgggcgcg aaaatgctgc caacgcagtt ggttaacgta aaagcgttta aaccagcctc
     2521 gaccaacaaa atcgccctgc tgttgccgct gaatggccag gcagcggtat ttggtcgcac
     2581 tattcagcaa ggctttgaag cggcgaaaaa tatcggcact cagccagtgg cggctcaggt
     2641 agctgccgca gacgtagcag aacaacctca gccgcaaact gcggatggcg ttgccagccc
     2701 ggcacaagcc tcggttagcg atctgaccgg tgatcagcct gcggcccagc cggtgcctgt
     2761 aagcgccccg gcgacaagca ccgcagcggt aagcgcaccc gcaaatccat ccgcagagct
     2821 gaaaatctac gatacctcat cacaaccact tagccagatc ttaagccagg ttcagcagga
     2881 tggcgcgagt attgtggttg gtccgttgct gaaaaataac gttgaagagt tgcttaagag
     2941 caacaccccg ctgaacgtgc tggtactgaa ccagccggag aatatcgaaa accgcgtcaa
     3001 tatttgttac ttcgcgcttt caccggaaga cgaagcgcgc gatgcagcgc gtcatattcg
     3061 tgaccagggt aaacaagcgc cgctggtgct gatcccacgc agttcattgg gcgatcgcgt
     3121 agccaatgcg tttgcgcagg agtggcagaa actgggcggc ggcaccgttc tgcaacaaaa
     3181 atttggttcc accagcgaat tacgcgcggg tgttaacggc ggttctggta tcgctttaac
     3241 gggtaccccg attactccca gagcgacaac cgactccggc atgacgacca acaatccaac
     3301 gctgcaaacc atgccaaccg atgaccagtt caccaataat ggcggtcgtg tcgatgcggt
     3361 gtacattgtg gcaacgccgg gtgaaatcgc ttttatcaaa ccgatgatcg ccatgcgtaa
     3421 cggtagccag agcggtgcaa tgctgtacgc cagctcccgc agcgcacaag gcaccgcagg
     3481 cccggatttc cgtctggaga tggaaggttt gcagtacagc gaaatcccga tgctggcggg
     3541 cggtaatctg ccgttaatgc agcaggcact cagcgcggtg aataacgatt attcactggc
     3601 tcgcatgtat gcgatgggcg tcgatgcctg gtcgctggca aatcatttct cacaaatgcg
     3661 ccaggttcag ggttttgaaa tcaacggtaa taccggaagc ctgacggcaa acccggattg
     3721 cgtgattaac aggaagttat catggctaca gtaccaacaa ggtcaggtag tccccgccag
     3781 ttaaccacca aacagaccgg cgatgcgtgg gaagtacaag cgcgtcgctg gctggaaggc
     3841 aaaggactgc gatttgtcgc cgctaacgtg aacgagcgtg gcggtgagat cgatctgata
     3901 atgcgtgaag gctggaccac cgtttttgtc gaggtgcgtt accgccgctc tgcgctttat
     3961 ggcggcgcgg cagccagtgt gacccgcagc aaacaacaca aattattaca gactgcccgc
     4021 ttgtggctcg cgcgtcataa tgggagtttt gatactgtgg attgccggtt cgatgtggta
     4081 gccttcaccg ggaatgaggt tgagtggatt aaggatgcct ttaatgacca ctcataatta
     4141 aggtttaagg attagcgtgc aagaaagaat taaagcttgc ttcactgaaa gcattcaaac
     4201 tcaaattgcg gcggcagagg cgcttccgga tgccatctcc cgtgcagcca tgacgctggt
     4261 tcagtctctg ctcaatggca acaaaatcct ctgttgtggt aatggaactt ccgctgccaa
     4321 tgcacagcat tttgctgcca gcatgatcaa ccgtttcgaa acggagcggc ccagcttacc
     4381 tgccattgca ctaaatactg ataatgttgt cttaacggcg attgccaacg atcgcttaca
     4441 tgatgaagtg tatgcaaaac aggtgcgggc gctgggtcat gcgggagatg tattgttagc
     4501 catttccacc cgtggcaaca gccgcgatat tgttaaagca gttgaagccg ccgttacgcg
     4561 tgatatgacc attgtggcat tgaccggcta tgacggcggc gaacttgcag gtttgttagg
     4621 gccacaggat gtggagatcc gcattccttc gcatcgtagt gctcgcattc aggaaatgca
     4681 tatgctgacg gtaaattgcc tgtgcgatct gatcgataac acgcttttcc ctcaccagga
     4741 tgattaagga gaatacatga aggcattatc gccaatcgca gtccttattt ccgcgctgct
     4801 gttgcaaggt tgtgttgccg ctgccgtagt gggtaccgct gctgtgggta ccaaagccgc
     4861 aactgaccca cgcagtgtcg gtacccaggt ggacgatggt accctggaag tgcgcgtgaa
     4921 cagcgcattg tcgaaagacg aacagattaa gaaagaaacc cgtattaatg tcacggcgta
     4981 tcagggcaaa gtgctgctgg ttgggcagtc accaaatgct gaactttcgg ctcgcgccaa
     5041 acagattgct atgggcgtag acggtgccaa cgaagtgtat aacgagattc gtcagggcca
     5101 gccgattggt ctgggcgaag catctaacga tacgtggatc accaccaaag tgcgttcgca
     5161 gctcttaacc agcgacctgg tgaaatcgtc caacgtgaaa gtgaccaccg aaaacggtga
     5221 agtgttcctg atggggctgg tgactgaacg tgaagcgaaa gcggcggcag atattgccag
     5281 ccgggtgagc ggcgtaaagc gggtaaccac agcgtttacg tttattaaat agcagcccct
     5341 tgtaatgcct gatgcgacgc ttgccgcgtc ttatcaggcc tacaacgatg caaaccgtag
     5401 gtcggataag gcgtttacgc cgcatccgac atgttttccc tcaaatcaga acaacagcgc
     5461 cagcccgccg acaatcacac cagacactgc caccatcgcc cctgtcagcc ataaggcttt
     5521 cgccgggaac gctttgcgca gcataatcag tgacggcaaa ctcactgccg ggagcgtcat
     5581 caacaatgcc agcgccggag cggttcccat acctgccagc atcatcgttt gtacaatcgg
     5641 aatttctgct gccgtgggaa tgacaaacaa gcatcctgct accgccatcg ccaccaccca
     5701 catcaggctg ttatcgacag caccatcggc atgggggaat aaccagacgc gtgcggcacc
     5761 caacaccagt actgcaagga tgtaaaccgg gatcgtactc cagaaaagtg tccatagcgc
     5821 cctgccccag cggctaaaaa aaccgctccg tgcttccggt atgtcaattt cgaccggtgc
     5881 ctgcgtttgc ggtgtttcac gcacccattt ttgcaccagc gtcgcaatca gcaacaccat
     5941 caccagcccg gccaccagac aaatcgccgc aaaaccccag ccgaggacaa accccataaa
     6001 caccagcgtc gccgggttta acaccggatt gcccatccag aatgccagcg caccgcccat
     6061 cgatacctgt tggcgacgca tccccgccgc gaccggagcc gcacagcagg tacacatcat
     6121 gcccggcagc gaaaacagcg ttcccagcag cgtgccgcga aagcgcgatt gcccaagcgt
     6181 acgcaacaac cagtcacgcg ggatcagcac ctgaatcaac gaaccgagga tcacccccag
     6241 caccgccgct ttccatactg cgaggaaata gatcatcgcg taatccaacg ccgcttgcca
     6301 cggattagca tccgcctgcg caaggataga tttaccgata ctgtgggttt cggctgcagt
     6361 aaacgctttg ccgtagtaat gttgccattt cacataccag agaccggcaa tgacaacgag
     6421 aaagaaaagc gcgggtttcc accactgaat gggtgttgcc gcctgagatg aagactgacc
     6481 agtcatagca ttccctagga ataagttatg ataattgagc gcgtgaatat tacgctcact
     6541 atcaattctt gggaataatt attcagctct tttgcgtaat tctgaagagc ttaaaatcgt
     6601 cacgccttca tgctcaggcc gcatcgcctc tgccagcatg acccgcgcca cgtctctcgc
     6661 atcaatggat ttccagttac ctggtaacaa acggaacagc ggcgcaaaaa gcgtttcgtt
     6721 catccgctgt ttgctacgat cgcccagtaa catcgacggg cgagcaatgg tcaatttcgg
     6781 ccagttctgg gcaattaatg cttcttccat ctcccctttg acgcggttat agaaaaacgg
     6841 cgagtgggca ttggccccca tagcactgac caccagcata tgctgcgcgc ccagccgccg
     6901 cccggttaat gcggtatcca ctaccagcgt gtaatcggca tgaataaacg cctctttgct
     6961 ccccgcttct cgccgcgtgg tgccgagaca acaaaacaca atgtcgatgg gttcggtgac
     7021 ctgcgccaac gcgtcactca gttgcggatc atggggatta aacaccccgg gcatatcgcc
     7081 caacggacgt cgcgtcggcg cagcaatggc gttaactttc ggttcattaa tcaacatccg
     7141 cagcaggtga ccgcccacca gccccgttgc gcctgtaatc agtacctgac tcatcttcgc
     7201 tcctttacag aattgtctgc cttgcgctcc acggctcatg caccagtctt aatagaccat
     7261 gaggtaatta tccccgattg tgggaaattc gcctcatcca atgcaacaac gcggaggaag
     7321 catgagtaag aaaattgccg ttttaatcag tgatgaattt gaggattcag aatttacttc
     7381 acccgcagac gagttccgta aagccggaca cgaagtaatt accattgaaa agcaagcggg
     7441 taaaacggtg aaaggcaaaa aaggagaagc cagcgtgacc atcgataaat ccatcgatga
     7501 agtgacgcca gcggagtttg atgccctgct gctaccgggc ggccattcac cggattatct
     7561 gcgtggggac aaccgttttg tcacctttac ccgtgatttt gtgaatagcg gcaaacctgt
     7621 tttcgccatc tgtcacggtc cgcagctgct gatcagcgcc gatgtgattc gggggcgcaa
     7681 actgaccgca gttaaaccga tcattattga tgttaaaaat gcgggcgcgg aattttacga
     7741 tcaggaagtc gtggttgata aagatcagct ggttaccagc cggacaccgg acgatctgcc
     7801 agcgtttaac cgcgaggcgt tacgcctgct cggtgcctga gtcgcgtagc caaatcattt
     7861 ttttaccaaa gcccagcgtg ttgtcggtga atttgatttc atcgagccgg atttcccaca
     7921 ccggggccga cagcattctg gcaaccggaa agcgatgatt gtacgccttg cgcgcgaggt
     7981 cgctttcctc accttccagc ctgcggatct cacctttaaa ctgcacaccg cgaattaacg
     8041 ctaccgtttt cggctgaccg tttaccgttc cggcaaccgc agcctgcggc ccactcatct
     8101 gcgcgtggcg cgttttttct tccgtcaaaa tgtagaaggc gactttctgc gcatcaaaca
     8161 gataaaaagc attagcgcac cacagttccc cttcctgctg cacacaccag gtgacaacat
     8221 gttgttttgc caaccaacgg ctgatggtga tgagtgtttc cattgctgtt ctcttttata
     8281 ctgtgggcct gaccttaaca tgcgacgcag acgatgacac cctggtttct ttacttgatc
     8341 cgtaccgccg acaataagct ttataccggg atcaccacgg atgtcgaacg ccgctatcag
     8401 cagcaccaaa gcggcaaagg ggcgaaagca ctgcgcggga aaggagaact gacgctggcg
     8461 ttttctgcgc cagtgggcga ccgttcgctg gcactacggg cggaatatcg cgttaagcaa
     8521 ctgaccaaac ggcaaaaaga gcgtctggta gcggaaggcg cagggtttgc agaactgttg
     8581 agcagcctgc aaaccccgga gattaaaagc gattgaaatg ctcgtgatac tcaaccagac
     8641 cggttacgcc attcagcgcg tcatccgcta aacgatgtac ctggaaggcg ctttcagtgc
     8701 ccggccagcg gcaacgcaga tcgtgatgcg ccgccagttc aaagccgaaa cgactgtaca
     8761 gcgccggatc gcccagcgtc accactgcgg catagccgaa ctcattaagc gaatcgagtc
     8821 cttcatagac cagttggcgt gccagcccct gtccacggta tttttcatca accgccaacg
     8881 gtgccatgcc gacccattgc aggtcttcgc cctgcacatc aaccggacta aatgccacat
     8941 agccaatgac ctgaccttcg tcatctgtcg ccaccagccc cagcgtcaga aagccatctt
     9001 cacgcagatc gtgaaccagc ttcgcttccg catcactttc gaatgagcga cgcagcaggg
     9061 catcaatacc cggcgcatca atgggaattt ctactcgaat tagcatggtt cacctaccga
     9121 tgtctgtttg gtttcaggcg cggttttcat tcccgcctca acaaaatccg ccagttgcag
     9181 cagcatcatg cgtaaggctt tcggcatttg ctccagttca atggcgtcca tcaggttttt
     9241 cacatgcagc cccagctccg tatcgccttc aatcaccagc cgacgctgga agaagagcgt
     9301 atctggatct tgtttacgag ccgcaatcat cagcagatcg ctgacgtcgg cactaaaact
     9361 cacatcagct tgcgcgttct ggctgaccac cagtttgcca ttcaccaccg aggtaaacca
     9421 ttgcaggtca atatcacgca catgaatact taaccagcgg ccttcaagaa actccagctc
     9481 gccatcatcc agcgcctgac ggaattgcca gcttaagacc tgctcaagaa cctggcgttt
     9541 tagcgcaaat ggcgtcagtt ttaccggtac actcaacaga gatggcccca aatgcacaat
     9601 acgggaacga agtttatcca acacgagttt tactccctgt ttcaacaatc atcctatttt
     9661 gccatatcag aaaaataaca tagcggtata aatcaacaat tccatatgaa attgctgcta
     9721 ccaccaatac aactttaact gccttaaatc aaaaattgtc gcagcaaggt taactaaaat
     9781 cccagttcgt taacattttt gcgttttgat agcgcaacct tcaggaaaaa ttatggagct
     9841 gctctgccct gccggaaatc tcccggcgct taaggcggcc atcgaaaacg gcgcagatgc
     9901 tgtttatatc gggctaaaag atgataccaa tgcccgtcac ttcgccggcc ttaactttac
     9961 cgagaaaaaa ttgcaggaag cggtgagttt tgtccatcaa catcgccgca aacttcacat
    10021 cgcgattaac acttttgcgc atccggacgg ttacgcccgt tggcagcgcg ccgtggatat
    10081 ggcggcgcag ctgggtgccg acgcgctgat cctcgccgac ctcgccatgc tggaatacgc
    10141 cgccgagcgt tatccgaata ttgagcgcca cgtatcggtg caggcttcgg cgaccaatga
    10201 agaggcgatt aacttttatc atcgccattt tgacgttgcc cgcgtggtgc tgccgcgcgt
    10261 gttgtcgatt catcaggtga aacagctggc acgggtcaca cctgtaccac tggaagtgtt
    10321 tgctttcggc agcctgtgca ttatgtcgga aggccgttgc tatctgtcgt cgtatctgac
    10381 gggtgagtcg cctaacaccg tgggcgcgtg ttctccggcc cgtttcgtgc gctggcaaca
    10441 aacgccgcag gggctggaat cccgcctgaa cgaagtgctg atcgaccgtt atcaggacgg
    10501 cgaaaacgca ggttatccga cgctgtgtaa agggcgttat ctggtggacg gcgagcgcta
    10561 tcacgcgctg gaagaaccaa ccagtctcaa taccctggaa ctgctgccgg agttaatggc
    10621 ggcgaatatt gcttcggtga aaattgaagg ccgccagcgt agcccggcgt atgtcagcca
    10681 ggtggcgaaa gtctggcgtc aggctatcga ccgttgtaag gccgatccgc aaagcgcgtg
    10741 gatggagacg ctcgggtcga tgtccgaagg cacgcagacc acccttggcg cgtatcaccg
    10801 taaatggcag tgagaagagc aatgaaatat tccttagggc cagtgctgtg gtactggcca
    10861 aaagagacgc tggaagattt ttatcagcag gccgccacca gcagcgccga cgtgatttat
    10921 cttggtgaag cggtatgcag caagcgccgg gcaaccaaag ttggcgactg gctggagatg
    10981 gcaaaatcgc tcgccggaag tggcaagcag attgtgctct ccacgctggc gctggtgcag
    11041 gcatcctctg aactgggcga actgaaacgc tatgttgaga acggtgagtt tctgattgaa
    11101 gccagcgatc tcggcgtggt gaatatgtgc gctgaacgca aactgccgtt cgtcgccggg
    11161 cacgcgctga actgctacaa cgcggtgacg ctgaaaatat tgctcaaaca gggcatgatg
    11221 cgctggtgta tgccggtgga gctttcccgc gactggctgg tgaatctgct taatcagtgc
    11281 gatgagctgg gcattcgcaa ccagtttgaa gtggaagtcc tgagctacgg tcatctaccg
    11341 ctggcctact ccgctcgctg ctttaccgcg cgttcggaag accgcccgaa agatgagtgt
    11401 gaaacctgct gcattaagta tccgaacggg cgcaacgtgc tgtcgcagga aaaccaacaa
    11461 gtgtttgtac tcaatggcat tcagaccatg agcggctacg tttacaacct cggtaacgag
    11521 ctgacatcca tgcagggatt ggttgatgtg gtccgcctgt caccgcaggg tactgacact
    11581 ttcgcgatgc tcgacgcctt ccgcgctaat gaaaatggcg ctgcgccact attgttgacg
    11641 gcaaacagcg actgtaacgg ctactggcgg cggctggcag gactggagct gcaagcctaa
    11701 gtaaatatgc tcgtcatact tcaagttgca tgtgctgcat ctgcattcgt tcaccccagt
    11761 cacttactta tgtaagctcc tggggattca ctctcttgtc gccttcctgc aactcgaatt
    11821 atttagagca cagctcactt tgttaacaac tttaactact ctttaatgca gtattaaaga
    11881 ttaatcggta acaaagtgag ctgttatgac tgataaaacc attgcgtttt cgttactcga
    11941 tctggccccc attcccgaag gttcttcagc gcgagaagca ttctcccact ctctcgatct
    12001 cgcccgtctg gctgaaaagc gcggctatca tcgctactgg ctggcagaac accacaatat
    12061 gactggcatt gccagtgctg ccacgtcggt attgattggc tatctggcgg cgaataccac
    12121 cacgctgcat ctggggtctg gcggcgtgat gttgcctaac cactcaccgt tggtcattgc
    12181 cgaacagttc ggcacgctca atacactcta tccggggcga atcgatttgg ggctgggtcg
    12241 tgcgccaggt agtgaccaac ggacaatgat ggcgctgcgt cgccatatga gcggcgatat
    12301 tgataatttc ccccgcgatg tcgcggagct ggtggactgg tttgacgccc gcgatcccaa
    12361 tccgcatgtg cgcccggtac caggctatgg cgagaaaatc cccgtgtggt tgttaggctc
    12421 cagcctttac agcgcgcaac tggcggcgca gcttggtctg ccgttcgcgt ttgcctcaca
    12481 cttcgcgccg gatatgttgt tccaggcgct gcatctttat cgcagcaact tcaaaccgtc
    12541 ggcacgactg gaaaaaccat acgcgatggt gtgcatcaat attatcgccg ccgacagcaa
    12601 ccgcgatgcc gaattcctgt ttacctcaat gcagcaagcc tttgtgaagc tgcgccgcgg
    12661 cgaaaccggg caactgccgc caccgattca aaatatggat cagttctggt cgccgtccga
    12721 acagtatggt gtgcagcagg cgctgagtat gtcgttggta ggtgataaag cgaaagtgcg
    12781 tcatggcttg cagtcgatcc tgcgcgaaac cgacgccgat gagattatgg tcaacgggca
    12841 gattttcgac caccaggcgc ggctgcattc gtttgagctg gcgatggatg ttaaggaaga
    12901 gttgttggga tagtgtgtct taacgcggga agccttatcc gagctggcaa cgctgtccta
    12961 cgtagacctg ataagcgaag cgcatcaggc attgtgtagg cagcagaaat gtcggataag
    13021 gcaccgctga ttactgatac accggcagta aattaaagct cgataaaata tgtaccaatg
    13081 cgttgccgac gccaaacacc agaatcagcg taatcatcgg cttgccgccc cagacgcgga
    13141 atttcgggct gccaaagcgt ttacgcgatg cgcgggccag cagtgccgga acaattgccg
    13201 cccagatggt agccgctaaa ccagcataac caatggcgta caggaatcca ttcgggaaca
    13261 gcagaccacc cacaacaggc ggtgcaaagg tcaacaatgc tgttttcaag cggcccatag
    13321 ccgagtcatc gaaaccaaac agatctgcca gatagtcaaa caaacccagc gttacgccaa
    13381 ggaacgaact cgctaccgca aagtttgaga acacgaccag cagaaggtcc aggctacggc
    13441 tgttcagcac gccgcttaat gcctgtacca gcacatcaat attaccgccc ttctctgcaa
    13501 taccgataaa ctccggacgc gggatgttac ccatcgtcgc cagcaaccag atggtataca
    13561 gcgccagtgc catcagcgta ccgtacacca ggcatttcac gatggttttc ggatctttgc
    13621 cgtaatactt catcaggctt ggcacgttac cgtgataacc aaacgacgcc aggcagaacg
    13681 gcaatgtcat cagcagatac ggcgcataag atgcattgct ttctgcaacg ttgaacaatg
    13741 tcgcaggctg cacatgcccc aacaggctgc caaaggtgag gaagaaggta atgactttcg
    13801 cccccagcac aatcgccgtc atgcggctga cggccttagt actcaaccac accacaaacg
    13861 ctaccagcag tgcaaaacca aaacccgccg cccgtgccgg gacgtttagc gacatctctg
    13921 cgaaggtgtg atgcagaatt gaaccactgg cagaaatata ggcataggtc aggatataga
    13981 gcacaaaggc aatggaaata ccgttgacca cgttccagcc tttgcccagc aaatctttgg
    14041 tgatggtgtc aaaactcgaa ccgattcggt aattcaggtt agcttccaga atcatcaagc
    14101 cggaatgcag catacagaac caggtaaaga tcagcgccgc cattgaccag aaaaaccacg
    14161 ccccggacat gaccactggc agagaaaaca tccctgcgcc aataatggtg ccgccgataa
    14221 tcaccacgcc gccaagcagc gacggtgacg tttgggtggt ggttagtgtt gccatgaggg
    14281 cttctctcca gtgaaaaata gtgcgactgc gttgttatgc attgcactgt accagtacgc
    14341 gagtacaaaa gacagaaaaa aagccccgat ggtaaaaatc ggggctgtat atattatttt
    14401 acagattgtg ttcgctgttc agcgatgatt acgcatcacc accgaaacga cgacgaccgg
    14461 tagagtcatc acgacgcgga gcgcggcctt cacgacgttc gccgctaaaa cgacgaccat
    14521 caccacggcc accttcacgg cgttcaccgc tgaagttacg accgccttca cgacgttcgc
    14581 caccgaaacc acgaccaccg ccacgacgct caccgccagt atgcggctgt gcatcgccca
    14641 gtaactgcat gttcatcggc ttgttgagaa tgcgagtgcg cgtaaagtgt tgcagcactt
    14701 cacccggcat acctttcggc agttcgatgg tggagtgaga agcaaacagc ttgatgttac
    14761 caatgtaacg gctgctgatg tcgccttcgt tagcaatcgc accaacgata tgacgaactt
    14821 caacaccatc atcacggccc acttcaatgc ggtacagctg catatcgcca acatcacgac
    14881 gttcacgacg cggacgatct tcacggtcac cacgcgggcc acggtcgtta cgatcgcgcg
    14941 gaccacggtc atcacggtca cggaattcac gtttcggacg catcggcgca tctggcggta
    15001 cgatcagagt acgttcaccc tgtgccattt tcagcagtgc cgcagccaga gtttcgagat
    15061 ccagctcttc accttctgca gtcggctgaa ttttgctcag cagtgcgcgg tattgatcca
    15121 gatcgctgct ttccagctgc tgctgtactt tagcggcgaa tttttccaga cggcgtttgc
    15181 ccagcagttc tgcgttcggc agttctactt ccggaatagt cagcttcata gtacgttcaa
    15241 tgttgcgcag cagacgacgc tcgcggttct caacgaacag cagcgcgcgg ccagcacgac
    15301 ccgcacgacc ggtacgaccg atacggtgaa cgtaagactc agaatccatc gggatatcgt
    15361 agttaactac caggctgata cgctcaacgt ccaggccacg ggctgcaacg tcggtcgcaa
    15421 tcaggatgtc cagacgacca tctttcaggc gttccagtgt ctgttcacgc agcgcctggt
    15481 tcatgtcacc gttcagcgcg gcgctgttgt agccgttacg ctcaagagct tcagccactt
    15541 ccagagtcgc gtttttggta cgaacgaaga taatcgccgc atcaaaatct tccgcttcca
    15601 ggaaacgtac cagtgcttcg tttttgcgca taccccagac agtccagtag ctctggctga
    15661 tgtcaggacg ggtagtcacg ctggactgaa tgcgcacttc ctgcggctct ttcataaagc
    15721 ggcgggtaat gcgacgaatc gcttccggca tggttgcaga gaacagagcg gtctgatgac
    15781 cttccgggat ctgcgccata atggtttcaa cgtcttcgat gaagcccatg cgcagcattt
    15841 cgtcagcttc atccagaacc agaccgctca gtttagagag gtccagagtg ccacgtttca
    15901 ggtggtccag cagacggccc ggagtaccga caacgatctg cggcccctga cgcagggcgc
    15961 gtaattgcac gtcataacgc tggccgccgt acagagcaac cacatttacg ccgcgcatgt
    16021 gtttagagaa atccgtcatt gcttcagcaa cctgtaccgc cagttcgcgg gtcggtgcca
    16081 gcaccagaat ctgtggtgct ttcagctcag gatcaagatt ctgcaacaga ggtaaagaga
    16141 atgctgcagt ttttccgctc cccgtctggg ccatacccag aacgtcgcgg ccattcagca
    16201 gatgtggaat acactctgcc tgaattggag atggtttttc gtaacccaga tcgttaaggg
    16261 cttcaaggat aggagccttc aggcccagat ctgcaaaagt ggtttcgaat tcagccatgt
    16321 agtacgtgtg cctcaaaatt aatggcggcc agtctacata actcatcatg aaattgatca
    16381 gcaattttca ttgaaaagtg tgaaccggct caaagtaggt gtattaacga acaacaacgc
    16441 cctcacccct taaggtgatg gcaatcaaaa aagattacgg gctgatgtgt acgtcagcta
    16501 ttgctggtcc gattctgcca ggtcatcttg gtcctggccc aggagcgata attccaacaa
    16561 tgcgtatcgg tgctcaacaa agttatgaac gttgttggca accgccagtt tgaacagtgc
    16621 cgtggcgctg tccgaatccc ccagacttag gtagtactta cctaaataga agttggtttc
    16681 actgagatgc tcagcgagcg aggtgttatc cgttgcgtcc gccttgagcc tttccattaa
    16741 cgtttgttcg ctaatgttgc ccaggtagaa ctcgacaatg ttccatcccc actgttcctt
    16801 atccgatttt tcgaagtgct gtttcaacac ttctttagcc tgcttctcat cgagcttctg
    16861 ctcggcgaga taaagccaca gactacggaa aggatcattg ggatcgtctt gataaaacgc
    16921 cagcagatca tcttgcgcta acttgtcacg accgccgtaa tataatgcga tcccgcgatt
    16981 caagtgcgcg tagttgtaag ttggatcaag ctcaagtaca gaatcaaacg cttcataggc
    17041 agcatcaaaa ttgcctgcct gcgttaaata tatgcctaag taattgaaca cttcaggcat
    17101 atccggtcgg attgccagcg cttgcgaaaa atcgttacgc gctaatgccc tcagaccgag
    17161 actatcatac aacactccgc gctcatataa aagctgtgcg cgttcgtcat cggttaaagc
    17221 ccgactggca aggatttgtt ccatacgtgc cagaatcact tcctgctgta aagtcggttg
    17281 caatggtacc gcgaggactt cacttttacg ccaggaagta ttactgcatc ctgcaagcgt
    17341 aagtgctgtc gcaacgaaac accagcgcaa aaaaggcttc atttcccact cccgaagacc
    17401 acggttgaat gaacgtcctg ttcccggttg ctaacaaggc gtcctgcccg gttaaaagcc
    17461 ccccgccgca gcggagggca aatggcaacc ttactcgccc tgttcagcag ccggagcttc
    17521 cggtgctgca gcaggttgag actgctcagt cgcttcttta atgctcagac ggatacggcc
    17581 ctggcgatca acttccagaa ctttcaccgg tacttcctga cccatctgca ggtaatcggt
    17641 cactttctca acgcgtttgt cagcgatttg agagatgtgg accagacctt ctttaccgcc
    17701 gccgatggca acaaatgcgc caaagtcaac gatacgggtc actttaccag tgtagacgcg
    17761 gcccacttcg atttctgcag tgatctcttc gatacgacga atagcatgtt tcgctttctc
    17821 gccgtcggtc gctgcgatct tcacagtacc gtcatcttcg atttcgatgg tagtgccagt
    17881 ttcttcggtc agggcacgga taacagagcc gcctttaccg ataacgtctt tgatcttgtc
    17941 cgggttgatc ttgatggtat ggatacgcgg tgcgaactca gagatatcgc cacgcggcgc
    18001 gttgatcgcc tgttccatta cgcccaggat atgcagacgc gcacctttag cctggttcag
    18061 cgcaacctgc atgatctctt tggtgatacc ttcaattttg atatccatct gcaatgcaga
    18121 gataccctcg cgggaacccg caactttgaa gtccatatcg cccaggtgat cttcgtcgcc
    18181 caaaatgtca gacagtacaa cgtagttgtc gccttctttc accagaccca ttgcgatacc
    18241 cgcaacggca gctttgatcg gcacacctgc gtccatcagc gccagagacg cgccgcacac
    18301 ggaagccata gaagaggaac cgttggattc agtgatttca gacacaacac gtacggtgta
    18361 cgggaatttg tccatatccg gcatgactgc cagcacgctg cgcttcgcca gacgaccgtg
    18421 accaatttca cgacgcttcg gagaaccgac catgccggtt tcgcctacgg agtacggagg
    18481 gaagttgtag tggaacagga aggtatcggt acgttcgccc atcagttcat caagaacctg
    18541 cgcgtcacga gcagtaccca gcgttgcggt aaccagcgcc tgcgtttcac cacgggtgaa
    18601 cagcgcagaa ccgtgagtac gcggcagcac gccagtacgc acatccagac cacggatcat
    18661 atctttttca cgaccgtcga tacgcggttc gcctgccagt acgcggctac gaacaacgtt
    18721 tttctcgata gcgtgcagaa tttcacccag ttcgttttcg tccagggttt cgtcttcagc
    18781 aagcagcgtc gcgatggttt cagatttgat gacatcaacc tgcgcataac gctcttgttt
    18841 gtcggtgatg cggtaagcat cgctcaggcg agcttcagcc agtgcagcaa cgcgcgcgtt
    18901 cagcgcttcg tttaccggct ccggctgcca gtcccaacgt ggtttaccgg cttctttcac
    18961 cagttcattg atgttctgaa taacaacctg ctgttgttca tgaccgaaca ctactgcgcc
    19021 cagcatctgg tcttcgctca gcagttcagc ttcagattca accatcagaa cagcggcttc
    19081 agtaccggca acaaccagat ccagtttgct ctctttcagc tcgtcctgag tcgggttcag
    19141 tacgtactgg tcattgatgt aacctacgcg agcagcacca atcggaccat tgaacggaat
    19201 accagacaga gacagtgctg cggaagcacc aatcatcgcg acgatatccg ggttaacttg
    19261 cgggttaaca gaaaccacgg tggcgataac ctgaacttcg ttgacgaagc cttccgggaa
    19321 cagcgggcga atcgggcggt caatcagacg cgcgatcagg gtttcgcctt cgcttggacg
    19381 accttcacga cggaagaagc tacccgggat acgaccagca gcgtaggtac gctcctgata
    19441 gttaacggtc agtgggaaga agtcctgacc tggtttggct tttttctggc caacaacggt
    19501 aacaaatacc gcggtgtcat ccatgctaac cataacagcg gcagtagcct gacgagccat
    19561 catgccggtt tccagagtca cggtgtgttg gccgtactgg aatttacgaa cgatcggatt
    19621 aagcaatgta atatcctttc tctttcttag acagtacctt acggcactgg tgttaatacc
    19681 cgatcttctg cgcatcctcg cgactaatga caaccctaac ccagctctat gtgggtaaag
    19741 cctctcatta gccgcgcgaa cctctgcaac ggaagatcat tcatagcaac aatacattag
    19801 tttccagtga attgctgccg tcagcttgaa aaaaggggcc actcaggccc ccttttctga
    19861 aactcggcag gaattagcga cgcagaccca ggcgctcgat gagctgggtg taacgtgcta
    19921 cgtctttacg tttcaggtag tcgagcagtt tacgacgctg agaaaccatg cgcagcagac
    19981 cacgacggct gtggtgatct tttttgtgct ctgcaaagtg gccctgcagg tggttgatct
    20041 gtgcagtcag cagtgctacc tgaacttcgg tagaaccggt gtcgtttgcg tcacgaccaa
    20101 actcagaaac gattttagct gttgcttcag tacttagaga cattttaaaa ctccaaagta
    20161 tatagaatga aaggacgccg atctctaatt cagcgatccc agtgtacgtt acgcaaagtg
    20221 ttaaacaatt tacgcgacgt taagcggcag tattctactc gtagcgactt gttatcgcaa
    20281 gacggttaac attacgccgg gtattcaacc accaggcgac gaggcgcgac gcggccttca
    20341 tcgtcaattt cgcccatacc gataaacttg ccgttctcac cttctgtaac gcgaaccagt
    20401 ccttccagcg gcgcaccgga tgtacgaact gggttaccat ttttgaagta aacagaagac
    20461 gttaacggaa gattcaccac cgggtagtcc gaagctggac tgtccattgg catcagtaat
    20521 ggatcaagta actccgcagc cggaatatcc tgctgttcgg cttgttcgac cagttcacgc
    20581 agatgttcca gggtcaccat ccgttcaacc ggatatttac ttaccgccag acgacgcagg
    20641 taaataacat gcgcgccaca accgagtttt tcacccaggt catcaatgat ggtgcggata
    20701 taagtgcctt ttgagcagtg aatttccagc tccagctcat tgccttcgtg gcgaataaac
    20761 agcaattcat aaatggtaat cgggcgcgct tcacgcggta cttcaatgcc ctgacgcgca
    20821 tattcgtaca gttttttacc ctgatatttc agtgctgaat acatcgaagg gatctgttcg
    20881 atatcgccac ggaaagtatc cagcgccgcc gccagttgct ctgcgctaaa ggttaccgga
    20941 cgttcttcaa cgatttgtcc gtcggcatca gaagtatcgg tacgctgtcc aagacgcgca
    21001 atgacccgat agcgtttgtc ggagtccagc agatactggg aaaacttcgt cgcttccccg
    21061 aagcaaattg gcaacatgcc agttgccagc gggtccagcg caccggtatg cccggcacgg
    21121 ttggcgttat aaatccgttt cactttttgc agcgcatcat tgctggacat accctgcggt
    21181 ttatccagca acaaaacgcc gttaatgtcg cgaccgcgac gacgaggacg actcattagt
    21241 cctccttgct gtcgtccggg ttaacacgac gttcttcgtc atgtttgacc acgctggtca
    21301 ccaggtttga catgcgcatc ccttcaacca gagagttgtc gtagaagaag gtcagttccg
    21361 gcacgatacg caggcgcatc gctttcccca gcaggctgcg gatgaaacca gaagcttctt
    21421 gcaacgcttt gatgcccgct ttaaccgcgt cttcatcttt gtcgttgagg aacgtcacat
    21481 atactttggc atacgccagg tcgcgagaca tttcgacacc ggaaacggtg gtcatcatgc
    21541 ccaggcgagg atctttaatt tcacgctgca ggatgagagc gatctctttt tgcatttcct
    21601 gcgctacgcg ctgcgggcga ccaaattctt tcgccataat aaattctcct gacaaaaaag
    21661 ggactgttag ccccttttta aaattaattt caggtggaag ggctgttcac gttggcctga
    21721 taagacgcgc cagcgtcaca tcaggcaatc catgccggat gcggcgtaaa cgccttatcc
    21781 cgcatggaac cctaaaaacc ttaagcgatg gtacgttgga tctcgatgat ttcgaatact
    21841 tcgatcacat cgccagtgcg gacgtcgttg tagttcttaa cgccgatacc acattccata
    21901 ccgttacgga cttcgttaac gtcatctttg aagcggcgca gggactccag ctcgccttcg
    21961 tagataacca cgttgtcacg cagaacgcgg atcgggttgt gacgtttaac cacaccttcg
    22021 gtaaccatac agcctgcgat ggcaccaaat ttcggcgatt tgaacacgtc acgaacttcc
    22081 gccagaccga taatctgctg tttcagttcc ggagacagca taccgctcat cgccgctttc
    22141 acttcgtcaa tcaggttata gatgacggag tagtaacgca gatctaggct ttccgcttca
    22201 atcactttac gtgcagaggc atcagcacgt acgttgaagc caaccaggat ggcgttggac
    22261 gccgcagcca gggtggcgtc ggtttcggtg ataccaccta cgccagaacc gatgatcttc
    22321 actttaactt cgtcagtaga cagtttcagc aaggagtcgg agatcgcttc cacagaaccc
    22381 tgtacgtctg ccttcaggac gatgttcact tcgtgaactt cgccttcggt catgttggcg
    22441 aacatgttct cgagtttaga tttctgctga cgcgccagtt taacttcgcg gaatttaccc
    22501 tgacgataca gtgcaacttc acgcgctttc ttctcgtcac gtacaacggt aacttcatca
    22561 cccgcagccg gtacgccgga caggccgagg atttccaccg gaatggacgg acccgcttcc
    22621 agcacttcct gacccagttc gttacgcatc gcacgaacac gaccgtattc gaagccacac
    22681 agaacgatat cgcccttgtg cagagtacct tcacgtacca gaacggttgc aaccggacca
    22741 cgacctttat cgaggaagga ttcgataacc gcaccgctcg ccataccttt acgtaccgct
    22801 ttcagctcca gaacttccgc ctgcagcagg atagcgtcca gcagttcatc gatgccggta
    22861 cccgctttcg cagatacgtg tacgaactgg ctttcaccgc cccactcttc tggcaggatg
    22921 ccatactggg agagttcgtt cttaacacga tccggatcgg cttctggttt atcaatcttg
    22981 ttcactgcaa ccaccaccgg tacctgcgcc gctttcgcgt gctggattgc ttcgatggtc
    23041 tgcggcatca cgccgtcgtc ggcagcaaca accaggacta cgatgtccgt tgcctgcgca
    23101 ccacgagcac gcattgaagt aaacgcggcg tgccctgggg tgtccaggaa ggtgatcatg
    23161 ccgttttcag tttcaacgtg gtatgcacca atgtgctggg taatgccgcc cgcttcgcca
    23221 gaggccactt tcgttgaacg aatgtagtcc agcagagagg ttttaccgtg gtcaacgtga
    23281 cccatgatgg tcacaaccgg cgcgcgcggt tcagccgcag cccccgtgtc acggtcgctc
    23341 attaccgcct cttccagctc gttttcacga cgcaggataa ctttgtggcc catctcttca
    23401 gcaaccagct gtgcggtttc ctgatcgata acctggttga tggttgccat tgcgcccagt
    23461 ttcatcatcg ctttgatgac ctgagagcct ttaaccgcca tcttgttcgc cagttcgcca
    23521 acggtgatgg tttcgccgat cacaacgtca cggttaacgg cctgagctgg cttctggaag
    23581 ccttgctgca gggaagaacc tttacgtttt ccgcctttac ctccacgtac tgctgcgcga
    23641 gcttcttcac gatcagcttt tgattcagcg tgtttgttgc ctttcttcgg acgcgctgct
    23701 ttcgcgttac gaccacggcc acggccgcct tcgacttcac gatcgctttc gtcttctgcc
    23761 tggcgagcat gttgagaagt agtgacgtga taatcgctgg aatcttcagt cggttccgcg
    23821 ttatcagtcc atttgttttc ttccgccata cgacgtgctt cttcagcaac gcgacgtgct
    23881 tcttcttcga gtttacgacg cgcttcttct tcagctttac gcttgagctc tgcagcttcc
    23941 tgctcacggc gggctttttc agcctgggcg tttttagtca tatcgtcttg ttgattgctc
    24001 actttgtctt tttccgcagc ttcacgtttc gcttgttcag cagcttcacg cttagcttgt
    24061 tctgcggcct cacgttcagc tttttgttgc gcctcgcgtt tagccgattc ttctgcctca
    24121 cgacgggctt gctcttccgc tgcaaggcgt tcagcctctt gcggatcgcg tttcacaaag
    24181 gtgcgtttct tgcggacttc gatttgtacc gatttgcttt ttccaccggt accaggaatg
    24241 ttaagggtgc tgcgtgtttt acgttgcagc gtcaatttgt ccgggcctga atttttctga
    24301 ttcaggtggt caatcaaagt ctgtttctct tgtgcggaca cagagtcgtc agcagacttc
    24361 cggatacctg catcagcaaa ttgctgtacc aggcgttcca cggaggtctg tcgctctgcg
    24421 gccagcgttt taatcgttac atctgtcatg ctgttccttc ctgctacagt ttattacgct
    24481 tcgtcaccga accagcaaat attacgggca gccataatca gtgctccggc tttttcgtcg
    24541 gtcacccctt cgatatcagc cagatcatca atgccctgtt cggcgagatc ttccagcgta
    24601 caaacgccac gggcggccag tttgaatgcc aaatcacgat ctatcccttc aaggttcagc
    24661 agatcgtcag ccggtttgtt atcaccgagg ctttcttcct gggcctgtgc aatggtggcc
    24721 agtgcatttt tagcacgctc gcgcagtgct tcaacggtcg gctcatcaag gccttcgatt
    24781 tccaacagct ctttcatcgg cacataggcc agttcttcca gcgtcgagaa gccttcttct
    24841 accagaacag tcgcgaagtc ttcgtcgatg tcgagatatt tggtgaaggt gtcgatcgct
    24901 gcgtgcgctt ccgcctgatg cttagcctgc aggtcgtcaa cggtcatcac gttgagttcc
    24961 caaccgctca gctgcgaagc cagacgcacg ttctgaccgt tacggccaat cgcctgcgcc
    25021 aggttaccgg cttcaacggc gatatccatg gtgtgtttat cttcatccac cacgatagaa
    25081 gcaacgtctg ccggtgccat tgcgttaatc acaaactgcg ccgggttatc atcccacagg
    25141 acgatatcga tacgctcgcc gcccagttca gtagaaaccg cctgaacacg cgcgccacgc
    25201 atacctacac aggcacctac cggatcgata cgtttatcgt tggttttcac cgcgattttc
    25261 gcacgagaac ccggatcgcg agccgctgct ttaatttcaa tcacttcttc gccgatttct
    25321 ggcacttcaa tacggaacag ttcgatcagc atttccggct tggaacgagt gacgaacagt
    25381 tgcgcgccac gcgcttccgg gcgaacggaa tagagcacgc cacgaacgcg gtcgccaggg
    25441 cggaagtttt cacgcggcag catatcttcg cgcaggatca cggcttcagc attgttgccc
    25501 agctccagag agatgttgtc gcggtttact tttttcacca cgccggtgat gatttcacct
    25561 tcgtgttcac ggaactgatc aaccaccatc gcacgttcgg cttcacgcac tttctgcacg
    25621 ataacctgtt ttgccgtctg ggtagtgata cggtcaaagg taacagactc aatctgatct
    25681 tcaacgtaat cgcccaggtt caggctttca tcttcataac gtgcggcttc aagggtgatt
    25741 tccttggtcg gctgggtgac ttcatcaaca actaaccagc gacggaaggt gtcaaaatca
    25801 ccgcttttgc gatcgatctg tacgcggacg tcgatctctt gttcatattt tttctttgtt
    25861 gctgtcgcca gcgcgctttc caatgcttcg aaaatcttct cgcgaggtag cgccttttca
    25921 ttggatacgg cttcaactac agccaaaatt tctttgttca tcgcgggctt ttcacctcat
    25981 ccagactatt aaaagtgggg aaccaggttc gccttctgga tattactcag cgcgaacact
    26041 tcatctttac cttcgacggt aactgtgatc atttcaccgt ctaccgcttt gataacgccc
    26101 tgccatttac gacggttttg taccgccata cggagaacca gagtcacctc ttctccgaca
    26161 aaacgggcgt agtgttcagc cgtgaacagt gggcgatcga gacccggtga ggagacttcc
    26221 aggttataag caacggtgat gggatcttca acatccagca cagcacttac ctggtggctc
    26281 acatcagcac aatcatcaac attgatgcca tcttcactat caatatagat gcgcagtgtg
    26341 gatgtgtgac cgcgaataaa ttcgatgcca accagttcaa aacccagggc ctcaactggc
    26401 gcagtaatca tctctgttaa tttttgctct aatgtggaca agcccacccc caagacataa
    26461 aaaaagggcc taaagcccag ttattctgta gtcagataac aaaaaacccc gataaatcgg
    26521 ggctttatat aactgaaccc tataatcgca actgcggtct ggagcacttt ccagaaggat
    26581 tttttcaaat cccactacga aggccgaagt cttcacagta tatttgaaaa aggactctaa
    26641 gggaaagtgg ttgcgggggc cggatttgaa ccgacgacct tcgggttatg agcccgacga
    26701 gctaccaggc tgctccaccc cgcgcctgaa actcggcaaa ttctactcgt tttgggtaaa
    26761 agatgcaaat actgctggga tttggtgtac cgagacggga cgtaaaatct gcaggcatta
    26821 tagtgatcca tgccacattt tgtcaacgtt tattgctaat cacgtgaatg aatatccagt
    26881 tcactttcat ttgttgaata cttttgcctt ctcctgctct cccttaagcg cattatttta
    26941 caaaaaacac actaaactct tcctgtctcc gataaaagat gattaaatga aaactcattt
    27001 attttgcata aaaattcagt gagagcggaa atccaggctc atcatcagtt aattaagcag
    27061 ggtgttattt tatgacgacg attctcaagc atctcccggt aggtcaacgt attggtatcg
    27121 ctttttctgg cggtctggac accagtgccg cactgctgtg gatgcgacaa aagggagcgg
    27181 ttccttatgc atatactgca aacctaggcc agccagacga agaggattat gatgcgatcc
    27241 ctcgtcgtgc catggaatac ggcgcggaga acgcacgtct gatcgactgc cgcaaacaac
    27301 tggtggccga aggtattgcc gctattcagt gtggcgcatt tcataacacc accggcggcc
    27361 tgacctattt caacacgacg ccgctgggcc gcgccgtgac tggtaccatg ctggttgctg
    27421 cgatgaaaga agatggcgtg aatatctggg gtgacggtag cacctataaa ggaaacgata
    27481 tcgaacgttt ctatcgttat ggtctgctga ccaatgctga actgcagatt tacaaaccgt
    27541 ggcttgatac tgactttatt gatgaactgg gcggccgtca tgagatgtct gaatttatga
    27601 ttgcctgcgg tttcgactac aaaatgtctg tcgaaaaagc ctactccaca gactccaaca
    27661 tgcttggtgc aacgcatgaa gcgaaggatc tggaatacct caactccagc gtcaaaatcg
    27721 tcaacccgat tatgggcgtg aaattctggg atgagagcgt gaagatcccg gcagaagaag
    27781 tcacagtacg ctttgagcaa ggtcatccgg tggcgctgaa cggtaaaacc tttagcaacg
    27841 acgtagaaat gatgctggaa gctaaccgca tcggcggtcg tcacggcctg ggcatgagcg
    27901 accagattga gaaccgtatc atcgaagcga aaagccgtgg tatttacgaa gctccgggga
    27961 tggcactgct gcacattgcg tatgaacgtc tgttgaccgg tattcacaac gaagacacca
    28021 ttgagcagta tcacgcgcat ggtcgtcagt tgggccgtct actgtaccag gggcgttggt
    28081 ttgactccca ggcgctgatg ctgcgtgact ctctgcaacg ctgggttgcc agccagatca
    28141 ctggtgaagt taccctggag ctgcgccgtg ggaacgatta ttcaatcctg aataccgtct
    28201 cagagaacct gacctacaag ccagagcgtc tgacgatgga aaaaggcgac tcggtgttct
    28261 cgccagatga tcgtattggt caattgacca tgcgtaatct ggatatcact gatacccgag
    28321 agaaactttt tggttatgcc aaaactggcc tgctctcctc ctctgccact tcaggcgtgc
    28381 cgcaggtgga gaatatggaa aacaaaggcc agtaattcga catcaaccct gcccttcagg
    28441 gggggggtta ccttgcttat cctctgtaaa ctcctttctg aacatcacat aatcgaaaac
    28501 atcatggttt gcatccacaa cccgtgagtc tcctttatag tgtgcaatca cttcctcaag
    28561 cgtttgcggc tgttccggct ttgttacccc catccacgca ttaataaggt aattattgta
    28621 agctgtcgaa aagatgttgt tttccgttgt gcgatccacg ccatccccaa gaacggggct
    28681 ataccagata aacatcggga catgatatgc ctgctggcta gcctccctgc ctccatgaaa
    28741 atagacgttc ttcttcgtag ggtcacgttc caggccgtgg tcggcaaaat acatgaccga
    28801 ggcgcggcga tcttttaata attcaaaaac ctgacctagc aaactatctg tgtaatgaat
    28861 ggagttgtca tagcaggcat cctgatcgtc ctgcggttga aacacggcgc tggattgcgg
    28921 ataggcgcta caagccggtt catggcttcc atttaaatga agaacaatca gtttcttttg
    28981 ctgcgtattt tgctgtaatg cttgcgataa atgcggcaac aacaattcat caaatcctct
    29041 gacataaact gtttccatgg cgcgcatggc gatactggta actgcagtac cattctgccg
    29101 aaaagcggat tgcgagctta gccagaaagt ctgaaatcct gcttgattag ccatattaat
    29161 aatgttgtcg gggtaattat gaatgtcatg actcaaaaca gaatcagcag ttaaagaaag
    29221 gggaaccgac agcgcagtgt aaggtgcgct gcttattgct tgattaaaca gtttgatctg
    29281 ttttctttgt gcttcaactt gcggtgtcgt agagcgtgta tatccataca aagacatatt
    29341 gtcgacacgt acagactccc ccacaatcaa cacgtaggta tcaatacctg tatccctgac
    29401 tgataattga aaatacggca ccgtgtttgc aattgagagt aatctttgat gctctttcgc
    29461 tgctaaagca aaatagttga gattgaaaaa cggcgtatag gtagcaaatc gcgacgctag
    29521 tatatatgga ctgaacgttt ttttattttt tgcatcttta taagcaaatt gacaagcgga
    29581 aaataaactg cccgaaatga caatcagcaa taatattcct gtcacttttt ttgtcggcaa
    29641 ggaaacatca tattttatta ttactgccca aaaaagaagg gataaaaaag caaaggcaca
    29701 tagataaggg atatacatcc ccagcatttt gacaacttca tccggatcac tctggagcac
    29761 actaatcgca aatccatcat tgaaagttgt accaaaggta caccatgaat agaggctaat
    29821 actcatgtct gccgcagtca gtaacacaaa tggtgcggca acaagcaggc gaagcggaag
    29881 ggatgatata cgttttacaa ccaggatggt caggacgaag aacagcaatc gctgaaccat
    29941 atgcgcgccg gaagaggcga ctaagttcgt aataccaaaa acaataacac aaagatacaa
    30001 caaccaatga gatttaaaac ttctagcaaa tttgttgaat actgtcatcc agaaatccaa
    30061 gttcacaacc aatataaaca attatcaaca atgttcaatt ttatatcaga catgtttttc
    30121 aactctgatc catatcagac cgaaacactg ttagtttttt ctttttaaat gatgcggcca
    30181 ttgcgttctc agtaattaaa taacattatc aatgcgtctc taaacattac gcagaacgta
    30241 gccatcagta gttatactga caggagcagg atggtttatc gagaagtaaa catatccgta
    30301 ttcgtaccgg aactggagtt gacacaataa agtgccaatt atgtcagcag aagggaaaag
    30361 tttataacta aggcgtaccg gcaccatcgt ttcaaggtac cagctacgag taaagcaact
    30421 ggacgagata cagatacctg acaaccattc ctcagaccag gaccaaaacg aaaaaagacg
    30481 cttttcagcg tctcttttct ggagtttggt accgaggacg ggacttgaac ccgtaagccc
    30541 tattgggcac taccacctca aggtagcgtg tctaccaatt ccaccacctc ggcacggata
    30601 ctacttttta gttcgggata tcgctggtcg gcttagccgg agcagctggt tgagtttgtt
    30661 cggttttcgc cggtgcactc agattttccc attcgctacc tttattggtt ttgttgctgt
    30721 tgatgttacc cagcaccaga ctgatgatga agaataacgt tgccagcagc gccgtcatgc
    30781 gggtcatgaa gttaccagaa ccacttgaac caaacagcgt agcggaagcg cctgctccga
    30841 aggaggctcc catatcagcg cctttacctt gctgcagcat gatcagacca acaaggccaa
    30901 ttgccacaat aaggaaaact accaaaagag cttcgtacat aatcaacctg ttccttgcgg
    30961 agttgccgcg taccaatgct tcaaccaata aagcgggagt ttttaatctt tcccactgaa
    31021 gcgggtgtga atactaacca aagcgaatga ccttcgcaag ggcaatttta tcgcattgta
    31081 tcaactgcgg aaaaaaacag caaaaccgat gtgttcgctg agaaaaaagg cgacaatcgc
    31141 cgccttttta gccagtcatt tatcgtttta aacggctttt actgcatcgg cgatgcggtg
    31201 tgcaaattca gtcacctgcg cttcgtcttc gccttccacc atcacgcgaa ttaacggttc
    31261 ggtgccggat ttacgcagca acacgcgtcc acggttgccc agcgcagctt caacctctgc
    31321 ggtcacggct ttaactgact catgctcaag cggatcgccg ctacctgcgg tgtaacgcac
    31381 gttaaccaga atctgcggga acattttcat gccgctgcaa aggtcgtgca ggctcatatg
    31441 gttacgtgcc atcgccgcca gcacctgcaa gccagcaacg atgccgtcac cggtagtggt
    31501 tttatccagc aggatcacat gaccggaatt ctctgcaccg atacgccagc ctttctcctg
    31561 cattttttcc agtacgtagc ggtcacccac tttcgcgcgc gcaaatggaa tacctaactg
    31621 tttcagcgcc agctcaagcc ccatgttact catcaatgta cccacagcac caccacgcag
    31681 ctggccctga cgaagacctt cacgcgcgat gatatacatg atctgatcac catcgacttt
    31741 attgccttca tggtcaacca taatcacgcg atcgccgtcg ccgtcgaagg caataccgag
    31801 atccgctttt tcagccagca cacgagcctg gagcgcgcga acgtcggtag cccccacttc
    31861 ggcattgatg tttacaccgt tcggctcaca accgatagcg ataacgttcg cccccagttc
    31921 acgcagcacg ttcggcgcga tgtgataagt cgcaccgttt gcgcaatcca ccacaatctt
    31981 cagttcgctg aggctaagtt cgttcgggaa cgtggctttg caaaactcga tatagcgacc
    32041 cgcagcatca acgatacggc tggctttacc cagttctgcc gaatcaacac agctgatctc
    32101 tttttccatt tccgcttcga tggcctcttc taccgcatcc ggtagtttgg tgccgtcgat
    32161 agagaaaaat ttaatgccat tatcgtagaa cgggttatgc gatgcagata tcacaattcc
    32221 ggcctctgcg cggaaggtac gcgtcagata agccacggcc ggtgttggca tcgggccagt
    32281 gaagagtgcg gaaaggcccg ctgccgccag acccgcttcc agtgctgact ccagcatata
    32341 gccagaaata cgcgtgtctt tactaataat gatcttacgg gagccgtggc gcgccagcac
    32401 tttacccgcg gcccaaccca gcttaagcac aaaatcaggt gtgatcggcg catcccctac
    32461 acgaccacga atcccatcgg taccgaaata tttacgatta ctcatagcgt ttgttttcct
    32521 ttgcagacag agtggcttcc accacccgca tcgcttctac ggtttctttg acgtcatgaa
    32581 cacgaataat gtgcgcgcct tgcattgcgg caatgaccgc acaggccaga ctaccgctca
    32641 ggcgctcgga cggccccacg ttcagcagct gcccaatcat cgattttcgt gacataccta
    32701 ccaacagcgg caggttgaaa tggtgaaatt cagccaggcg cgccagtaat gaatagttat
    32761 gggagagatt tttaccgaaa ccgaatccgg ggtcgagcaa caatttctct tttgcgatac
    32821 ccgcctgctc gcaacgtgct atttgctcaa taaagtagcg attcacttct gcaaagacat
    32881 cgtcatactt cggagcttcc tgcatggttt ttggatttcc ctgcatatgc atcagacaaa
    32941 ccggtaaacc ggtttctgcc gccgcctcca gagcgccagg ttcggaaagg gagcggatat
    33001 cgttaataat gtgagcgcca actttcgctg actcacggat gacttctggt ttggatgtat
    33061 ctaccgagag ccagacttcg aagcgttgag caattgcctc aaccacagga ataacacgtt
    33121 gcaactcttc ttcaacgcta acttccgccg cccctgggcg cgtggactcg ccaccaacgt
    33181 caatgatcgt cgcgccagcg ttgatcatca gattcgcatg tttcaccgca tctatcagcg
    33241 agttatgcgt gccaccatcc gaaaaggaat caggcgtgac gttgaggatc cccattacgt
    33301 gaggatggct aaggtccagt gaagtgccct gggcaaagag tttcatggtg ttatccctgg
    33361 tatgaattga taagaaaaaa ccccggagca cgccccgggg ttttcggtac aaatacagtc
    33421 atctgatgcg ggaacttact tgtcgcctaa ctgctctgac atggtgttac ccgggttcgg
    33481 cgtacgcggt tcatcaaccg gacgaggagc ctttggacta ccattgtcgc cagaattgtt
    33541 agaagcgcct ggttcttccc agcccgctgg cggacgtaca tcgcgacgtg ccatcaggtc
    33601 atcaatctgc ggtgcgtcga tagtctcata tttcatgaga gcatctttca tcgcatgcag
    33661 aatatccata ttgtcggtca gaagctgacg cgcacgatta tagttacgct caatcagtgc
    33721 tttcacttcc tggtcgatga tacgtgcagt ttcatcggac atatgtttcg ctttcgctac
    33781 gctacggccg aggaacactt caccttcttc ttccgcgtac agcagtggac ccaatttctc
    33841 agagaagccc cactgagtca ccatattacg cgccaggttg gtcgcaactt taatatcgtt
    33901 ggacgcaccg gtagaaacat gttccggccc gtagatgatc tcttctgcca gacgaccacc
    33961 gtacagcgta gaaatctggc tttccagttt ctgacggctg gcgctgattg cgtcgccctc
    34021 aggcaagaag aaagtcacac ccagcgcacg accgcgtggg ataatcgtca ctttgtgcac
    34081 cggatcgtgt tccggcacca agcgaccgat aatcgcatga cccgcttcgt ggtaagccgt
    34141 cgattctttc tgcgcttccg tcatcaccat ggagcgacgt tccgcaccca tcatgatttt
    34201 atctttcgct ttttcgaact caatcatcga cacaacgcgt ttgttgccac gagcagcgaa
    34261 cagtgccgct tcgtttacca ggttcgccag gtcagcaccg gagaaaccag gagtaccacg
    34321 ggcaatgatt gccgcgtcga tatcgggtgc caatggtacg cgacgcatgt gaactttcag
    34381 gatctgctca cgaccgcgaa catctggcaa gccaaccaca acctgacggt cgaaacggcc
    34441 aggacgcagc agggctgggt caagaacgtc cggacggtta gtcgcggcga taacgatgat
    34501 accttcgtta ccttcgaagc catccatctc aaccagcatc tggttcagag tctgttcacg
    34561 ttcatcgtga ccaccgccca gaccagcgcc acgctggcgg cctacggcgt cgatttcatc
    34621 gataaagatg atgcacggtg ccgctttctt cgcctgttcg aacatgtcac gaacacggga
    34681 tgcacccaca ccgacgaaca tttctacgaa gtcagaaccg gagatagtaa agaacggaac
    34741 tttcgcttcg cctgcaatcg ctttcgccag caacgtttta ccggtacccg gaggaccgac
    34801 catcaggacg cctttcggga tcttaccgcc gagtttctgg aagcggctcg gctcgcgcag
    34861 atactctacc agttcagcaa cttcttcttt tgcttcgtcg cagcccgcaa cgtcagcaaa
    34921 ggtcgttttg atctgatctt ccgtcagcat gcgcgctttg ctcttaccaa acgacatggc
    34981 acctttgcca ccgccgccct gcatttgacg catgaagaag atccagacac caatcagcaa
    35041 cagcatcggg aaccaagaga tgaagataga agccagcagg cttggttctt caggcggttc
    35101 accgacaacc ttgacgttct tggtcaacag gttatccagt aatttcggat cctgaaccgg
    35161 aatgtaagtg gtataacggt tactatcttt cttggtaacg ttgatttcac gtccgttgat
    35221 acgcgcttca cgaacctggt cgttattgac ctcttgtagg aaggtagagt aatccacctt
    35281 acggccatta gactcgctgg gcccaaagct ctggaatact gacatcagca caacggcaat
    35341 gaccagccag agtattaggt ttttcgccat gtcactcaag ggattaacct cttattacaa
    35401 ctgtgttaaa aacagcgtca ggatactcta tatccagcat ctttcaaact ttcgtctgaa
    35461 atctcccggt tagggtttac gcccggtcgc tacaatatac acttcccgcg aacgtgcacg
    35521 agaagagtcc ggcttacgaa ctttgacctt cgtaaacagg gagcgaattt cccttagata
    35581 ctcatcgaaa ccttcgccct ggaacacctt cactacaaaa ctgccacctg gcgctaatac
    35641 atcacgacac atttctaacg ccagttccac cagatacatg gcacggggga tatccaccgc
    35701 cggtgttccg ctcatgtttg gtgccatatc ggacatgaca acctggactt tgctgtcgcc
    35761 aacgcgctcc agcagtgctt tcatcaccag ttcatcacga aaatcgccct gaagaaagtc
    35821 cacaccaacg ataggatcca taggtaaaag atcgcaagcg atgatgcggc ctttgccgcc
    35881 aatttgggtg accacatatt gtgaccaacc acccggagca gcaccaaggt cgacaaccgt
    35941 cattcccggt ttaaagagtt tgtcactttg ctgtatttca tcaagtttaa accaggcacg
    36001 ggaacgtaac ccctttttct gtgcctgttg aacatattta tcgctaaagt gttcctgaag
    36061 ccagcggctg gagctggcag aacgcttctt acctgtcatt taactttccc atggggataa
    36121 ctcatcgtaa ccaattgcgt aaatttttac gcgcctattt ggtgatatat gggagatggc
    36181 ggtagaatga cccgttttca atcccaacgt aagcaaaaaa tacgatgaat ctgagtacta
    36241 aacaaaaaca gcacctgaaa ggtctggcac atccgctcaa gccagttgtt ctgcttggca
    36301 gtaatggttt gaccgaaggg gtgctggccg agattgaaca agcgttagag caccatgaac
    36361 tcatcaaggt gaaaatcgcc accgaagatc gcgaaacaaa aaccttgatc gtggaagcta
    36421 tcgtgcgcga aaccggcgcc tgtaatgtac aggtcatcgg taaaacgctg gtgctttatc
    36481 gcccaactaa agaacgtaaa atctcgctgc cacgctaaga ttatcctaaa gttacacaca
    36541 tttgctgtgt aaaacgaggg gttttccgca ggcaggagag caaaatgcca cgctctgttc
    36601 gttgataaaa ggccgcatag cggccttttt cctttcttta caatacatca acatcttgat
    36661 gtattgggta attcttacag gtattccacc ttaattactt caaattctac ttcgccgccc
    36721 ggcgttttga tgaccacaac atcatcttct tctttgccga tcaggccacg agcaataggc
    36781 gagtttacag aaatcaggtt ttgtttaaag tcagcttcgt catcgccaac gatgcgataa
    36841 gtctgttctt cgtcagaatc cagattcagc accgttacgg tagcaccaaa aataacgcgc
    36901 ccattgttgg gcattttggt gacatcaatc acctgcgcgt tcgacagctt ggcttcgatg
    36961 tctttaatac ggccttcgca gaaaccctgc tgttcacgag ctgcgtggta ttcggcgttt
    37021 tctttcaggt cgccatgctc acgcgcttcc gcgatagcag caatgatttc aggacggcgc
    37081 acagatttca gaaaatccag ctcttcgcgt aatttttcag cgccgcgtaa ggtcatcgga
    37141 atagcttgca tttgttatac ctcttgaata ttcctgatgg ggcaagtctt cacccacccc
    37201 ggctgttcgg cctgcccggc ataactcctc accgggacca gaagcaaaaa aataccgacc
    37261 cgggtacaag tcccaggtca gctacaattc acattttgat agtcatttta ccctgaagtt
    37321 cccgaagggt catcgtttac tttatagggc gttgcgccgt agtatgacgg ctcgattcca
    37381 ggttgttagc gcgagattat gcgattttcc agatttatca tcggattgac cagctgtata
    37441 gcgttcagtg ttcaggccgc gaatgttgat gagtacgtta ctcaactccc cgctggtgcc
    37501 aaccttgccc tgatggtgca aaaagtcggc gcgtcggccc ccgctattga ttaccacagt
    37561 cagcagatgg cgctgcccgc cagtacgcag aaagtgatta ctgcgctggc ggcgttgatt
    37621 caactcggcc ccgattttcg tttcaccacg acgcttgaaa ccaaaggcaa tgtggaaaac
    37681 ggcgtactta agggtgactt agtggcgcga tttggtgccg atccgacgtt aaaacgtcag
    37741 gatattcgca atatgatcgc gactttgaaa aaatctggcg tcaaccaaat cgatggcaat
    37801 gtgttgatag atacctccat tttcgccagc cacgataaag cccccggctg gccatggaat
    37861 gacatgacac aatgctttag cgctccgcct gccgctgcca tagttgaccg caactgtttc
    37921 tccgtctcgc tctacagtgc cccaaaacct ggtgatatgg cttttatacg cgtggcatct
    37981 tattaccccg ttacgatgtt cagccaggta cgcaccctcc cccgaggttc tgccgaagcg
    38041 caatactgcg aactggatgt cataccaggc gacctgaacc gctttacgct gacgggatgc
    38101 ctgccacaac gttctgagcc gctcccgttg gcttttgccg tgcaggatgg agccagctat
    38161 gccggggcaa ttctgaaaga tgagttaaaa caggcaggta tcacctggag cggaacactg
    38221 ctgcgccaga ctcaggttaa cgaacctgga acggtagttg ccagtaaaca gtcggccccg
    38281 ttgcacgatc tgcttaagat tatgctgaaa aagtcggaca acatgatcgc cgatacggtt
    38341 ttccgcatga taggccatgc gcgcttcaat gtgcctggaa catggcgggc cgggtcggac
    38401 gccgtgcgtc agatcctgcg ccagcaagcc ggtgtcgata ttggaaacac cattattgcc
    38461 gatggttcag ggctttcgcg gcataacctg attgcccccg ccaccatgat gcaggtgttg
    38521 caatacattg cccaacacga caatgaactt aactttatct ccatgctgcc gctggcgggc
    38581 tatgatggct ctttgcagta ccgtgcaggt ctgcatcagg cgggcgtgga tggaaaagtc
    38641 tcagcgaaaa ccggttcgtt gcagggggta tataacctgg cgggattcat taccacagcg
    38701 agcgggcaac gaatggcgtt tgtacaatat ctttctggct atgcagtaga accggcggat
    38761 cagcgtaatc gccgtattcc gttagtgcgt tttgaaagcc gtttgtataa agatatttat
    38821 cagaacaatt agtcaaaaag aaaccccggc acatggccgg ggttttgctg attaacgctt
    38881 gtaaatgaac tcaacgcctt cttcgtcgtc ttcgtcccag tcatcatccc agtcctcatc
    38941 atcctcttca gcaatctctt caagctgctg gcgatgataa tcatcccaca tgaattcgac
    39001 tttctctggc tgtttcgctt cttcagcctg cacgaccggg ttttcaatga taaaggtcat
    39061 cacatcccag cagagatctt tcacgcccag tccactcgcc gcagagatca gataatattt
    39121 atcttcccag cccagcgctt cagcaatcgc tttcgctttc tcttcagctt ctgccttatc
    39181 cagcagatcg atcttattga acactaacca acgcggtttc gccgccagat cctggctgta
    39241 tttttccagc tcgctgataa taatacgcgc gttttcaacc ggatcggtgc cgtcaatcgg
    39301 atcgatatcg atgaggtgca acaggacgcg gcaacgttcc aggtgcttca ggaagcggat
    39361 acccagacct gcgccttccg cagcgccttc aatcagtcct ggaatatcgg caacaacgaa
    39421 gctcttttcg ttgtccattc gtaccacacc cagacttggc accagagtgg taaacggata
    39481 atccgccact ttcggtttag ccgccgatac cgcgcgaata aaggtcgatt tacccgcgtt
    39541 tggcatcccc aacataccga cgtcagccag cagcatcagc tccagcagca gctcacgctt
    39601 atcacccggc gtaccgttgg ttttctgccg tggtgtacgg ttaacggacg atttgaaacg
    39661 ggtattgccc agaccgtgcc agccgccctt agcaaccagc agacgctgac cgtgtttagt
    39721 catatcgccc atggtttcac cagtaccctg gtcgattaca cgcgtaccta ccggcacttt
    39781 aatcgtcacg tctttaccgc gcttaccggt acaatcgcgg cttgcgccgt tctgaccgcg
    39841 ctctgcacgg aaagattttt caaaacgata atcgataagc gtgttcaggt tttcgtcggc
    39901 ttccatccat acgtcaccac catcaccacc gtcgccgcca tccgggccgc ctttcggaat
    39961 atacttttcg cggcggaagc tcacgcaacc attaccgcca tcacctgcaa cgaccagaat
    40021 cgatgcttca tcaacaaact tcattttatt ctccgtaaat cattcgcctg cgcggggttg
    40081 cgataccacc gttgtatgct tacgtaatcc gccccaaata cgatgaccaa tggcggaata
    40141 catcgcgccc gcaaccacga caaacgcacc gagataacct aaaaggttta acatcggtct
    40201 ggcgaagaaa tcgggccagg ccagtgataa aagatctgaa aaaaacagcg taaacagtgg
    40261 ggtgagcgtg atgatcgcgc tcacctgcgc tgcctgccag cgagccatcg cttccgccag
    40321 ggcgccatat cctaccaatg tattcagtcc gcaaaaaatt aaacatgcga gctgccagtg
    40381 gctaagctgc gctatcactc ctggctttgc cagagggaag agcgcaattg tacataaagt
    40441 gtacagcaaa aacaggatct gcggtgaggc cagccgacgc aataaaacct tttgcgccac
    40501 gccataactc acccaaaccg tcgccgcacc gaccccaaag atgactcccc aggtgtaatc
    40561 agtgagcttt gtaaatatct cgaccagact ggtgttaaaa aacatcacca ggccgctcag
    40621 gagcatcaat gcccctacaa cctgagtgct gcgcattttc tctttcagga taaatacgct
    40681 ggcaaccatc atgccaactg gcgagagttg cccaatcacc tgcgaagcgg tcggactcag
    40741 gtattgcaag gatgagctga acaggatgaa gttcccaaac agcccggcgg tcgccactgc
    40801 caacaaaatc aaccagcgtg gcttacgaaa cacgcgtaat ggcggcaacc tcttcttcac
    40861 cgcaagaatg gcacccaggc caatactcgc catcaagaaa cggtaaaaca cgattgtcgg
    40921 aggttccatc acctccagca cctgcttcat tgcgattggc aacgcccccc agcaaattgc
    40981 tgtggtgagc gccaaaagaa tgccaatgcc tgcctgctgc ttcataccgt attccctgca
    41041 aagcgcattt gcggattaac gtcgcaccat gctcattttt accggttatc gaatgtaaaa
    41101 agccccgcaa cgtgttgcgg ggctttcatc cgttaccggg acgcgaaaaa cttattcagc
    41161 ttcgatgctg ataaatttac ggtttttcgg gcctttaact tcgaatttca ctttaccgtc
    41221 tgctttagca aacagagtgt ggtcacgacc gcaacctacg ttagcgccag cgtggaattt
    41281 ggtaccacgt tgacgaacga tgatgctacc cgccagaacg gattcgccac cgaaacgctt
    41341 aacgcccagg cgtttagctt ctgaatcgcg accgttacgt gtggagccgc cagccttttt
    41401 atgtgccatt tgaaatctct cctcaggtct taggcgctga tgccagtaat tttcacatca
    41461 gtgaaccact gacgatggcc ctgctgctta cgatagtgtt tacgacgacg aaacttaacg
    41521 attttaactt tctcgccacg accgtgagca acaacttcag ctttgattac gccgccatca
    41581 acgaaaggaa cgccgatttt gacttcttca ccgtttgcga tcatcagcac ttcagcgaac
    41641 tcaacagttt cgccagttgc gatgtccagc ttttccaggc gaacggtctg accttcgctt
    41701 actcggtgtt gtttaccacc actttggaaa accgcgtaca tataaaactc cgcttccgcg
    41761 cacacctttt caatgattca gagtgcgcta taaatattca caatagggcg cgaatattac
    41821 gcaaaacgca cgcctttgac aagtgctaca gtcaatacac gaagaaaaaa aacacaactt
    41881 gtacggtaac gtttatctgt gccatttttt cagtacaatc accctatatt cctaaccata
    41941 aaccctaagt tgcctttgtt cacagtaagg taatcggggc gaaaagcccg gcttttgcga
    42001 tgaatttaga aaaaatcaat gagttaaccg cgcaagatat ggcgggtgtt aatgcggcaa
    42061 tccttgagca gcttaattcc gacgtccaac tgatcaatca gttaggctat tacatcgtca
    42121 gcggcggcgg taaacgtatt cgtccgatga ttgctgtact ggctgcacga gctgttggct
    42181 atgagggaaa tgcgcatgtc accattgctg ccctgatcga gtttatccac acggcgactc
    42241 tgctacacga cgacgttgtg gatgaatcag atatgcgcag gggtaaagct accgccaacg
    42301 ctgcatttgg caatgccgcc agcgtgctgg taggcgattt tatttatacc cgcgcgttcc
    42361 agatgatgac cagcctcggt tcactcaaag tgctggaagt catgtcagaa gctgtaaacg
    42421 tcatcgcaga aggtgaagtt ctgcaactga tgaacgttaa cgatccggac atcactgaag
    42481 aaaactacat gcgcgttatc tatagcaaaa ccgcgcgtct gtttgaggct gccgcgcagt
    42541 gttccgggat tctggctggc tgtacgccgg aggaggagaa aggcctgcag gattatgggc
    42601 gctatctcgg cactgctttc cagttgatcg acgatttact cgattacaat gccgatggcg
    42661 aacagttagg taaaaacgtc ggcgacgatc tgaacgaagg taaaccgacg ctgccgctgc
    42721 tgcatgcgat gcatcatggc acaccagaac aggcacagat gatccgtacc gccatcgaac
    42781 agggtaacgg tcgccatctt ctggaaccgg ttctggaagc aatgaacgct tgtggatctc
    42841 ttgaatggac gcgtcagcgc gccgaggaag aagcagacaa agccatcgca gcgttacagg
    42901 tgctcccgga caccccttgg cgagaagcac tcatcggcct cgcgcacatc gctgttcaac
    42961 gcgatcgtta atcccctccc ttcatcccgc gcagtgcgcg ggatgattcc agtaaattcc
    43021 ataaaaacac taattcagcg ctataacacc tgaaaaaaaa gggcgatgaa tctttatata
    43081 ttctgaatat tcacactctt tacaggaact ttttagagca ataggccatc aggagtatag
    43141 tgatgcccga cagaagaagt gttctgaatg aaagcgacta acttaaggag tgaggaaaga
    43201 tggaaagtaa tttcattgac tggcatcccc ctgacatcat tgcaggtttg cgcaagaaag
    43261 gaacgtcaat ggcggcggaa tctcgcagaa atggtttgag ttcctcaacg ctggcaaacg
    43321 cattatcgcg cccatggccg aaaggagaga tgattattgc gaaagccctg ggaactgacc
    43381 cctgggttat ctggccatca cgctaccatg atccgcagac ccatgagttt atcgacagaa
    43441 cgcagttgat gcgtagctac actaaaccga aaaaatgagt ggtctggcgg tagccccgcg
    43501 aacggggctg ccagctctca gacgattact cgcctttcac acgcttaata tttgcaccta
    43561 aagcgcgcag tttgtcttca atgcgttcgt agccacgatc gatgtgataa atacgatcaa
    43621 ccaccgtcgt cccttccgca atacagccag ccagcaccag gcttgctgat gcacgcagat
    43681 cggttgccat aacctgtgca ccagaaagtt tttcaacacc atgacaaata acggtattgc
    43741 tttcgatttc ggcatgcgcg cccatacggc taagctccgg cacatgcata aagcggtttt
    43801 caaagaccgt ttcggtgatg aatccggtcc cttctgccac caggttcaac agcgtgaact
    43861 gggcctgcat atcggtcggg aatgccggat gcggcgcggt acgtacgtta acagccttcg
    43921 gacgtttgcc atgcatatcc aggctaatcc agtcttcgcc gacttcgatg tccgctccag
    43981 cgtcacgcag tttcgccagc acggcgtcga gagtatctgg ctgcgcgtta cggcagataa
    44041 ttttgccgcg agaaatcgcc gccgccacca ggaaagtacc ggtttcgata cgatccggta
    44101 gcacgcgata gacaccgccg cctaaacgtt ccacaccttc gatgacgata cgatcggtgc
    44161 cctgaccgct aattttcgca cccagcgtaa tcaggaagtt cgcggtatcg acgatttccg
    44221 gttcacgcgc tgcgttttca ataatcgtgg taccttccgc cagggttgca gcacacatga
    44281 tggtcaccgt tgcgccaacg ctgactttat ccatcacgat atgtgcgcct ttcagacgac
    44341 catcgacgga agctttaacg taaccttctt ccagtttgat ggtcgcgcct aattgttcga
    44401 ggccagaaat gtgtagatca accggacgcg caccgatcgt acaaccgcca ggcagtgaaa
    44461 cttgcccctg accaaagcgc gctaccagcg gccccagtgc ccagatagaa gcacgcatgg
    44521 ttttaaccag atcgtaaggt gcgcagaata cattaacgtc gcgggcatca atatgcacag
    44581 aaccattacg ttctactttc gcacccagct gacttagcag cttcattgat gtatcgacgt
    44641 ctttcagttt cgggacgttc tggatctcta ccggttcttc cgccagtaga gcggcaaaaa
    44701 ggataggcag agcagcattt ttagcgccgg aaattgtgac ttcgccctgg agcttcgttg
    44761 gcccctgaac acgaaattta tccatttagt ttgttctcag ttaacaattc atatccgcta
    44821 ccggcgaatc gcccatagct caaaagccgt tcagtttgcg atcgcgcgcc cactccgcag
    44881 gggtatacgc tttgatcgac acagcatgaa tgcggttatc cgcaatatat tccatcagcg
    44941 ggccatagac cgtctgctgt tttttaaccc gactcatgcc gtcaaacaac tcacccacgg
    45001 caataacctg aaagtggctg ccatcgccgg aaacgtggac ttcctggagg gagagagcgt
    45061 tcatcaacac gctctgaatt tcattatttt ccatgggatc ttcaatcatc agttaataaa
    45121 ccagcgaaac atcttagagc aaagttgcgc tggcataaat aagcaaaaag cctcgctgat
    45181 aaatcagaca aggctcgact tgcaggcagg tttgccggac aggcggttaa cgccatatcc
    45241 ggcctgaaaa aatttaacga ggcagaacat cagcaggcaa attatacaat ttcgccaggg
    45301 tatacacttt gtcgtttacc ccctgaagcg tcacattgtt gccctgcttt ttcgccagat
    45361 cgataagctg gagcagcagt gccagtcccc ccgtatccac gcgggacaca cggctaagat
    45421 cgatgcaggt aatccccttc accgcttcct cacgcatttc ccaaagcggt agcaaaacgt
    45481 cctgatccag ctctccggat aacgccagcg tgtcacccgt ctgcatccag ctcagtgact
    45541 cgctcattat tttttctctt ccagagtgat tttctgttga gaaatcgatt tcagttgcgc
    45601 agtcaggccg tcgatacctt tggtacgcag cagcgttccc cactcgtttt gtttggtggt
    45661 gatcatactg acgccttcag caatcatgtc gtaagcctgc cagttgcccg tctgggagtt
    45721 tttacgccac tggaagtcca gacgcaccgg cgggcggcca ttcggatcaa taatggtaac
    45781 gcgaatcggc acaatggttt tatcgcccag cggctgttct ggcgcaatct gataggtttg
    45841 accatgatac atcgccagcg cctgaccgta agcctgcttc aggtactcac ggaaagcggc
    45901 aaagtaggct tcacgttgag caggggtcgc actcttgtaa tactggccca gcaccagcgc
    45961 accggcgtat ttcacctgta cgtatggcag cagttcctga tcaacaatgg tacgcagata
    46021 atccgggttg gcccgaattt gcggttgctc attcttcagg cgatcgaacg ttttctgcgc
    46081 cgcctcgtcc atcagcttat aaggattggt ctggtctgcc gcggttgccg cactcagcgg
    46141 tgcaatcacc agcaaagcga ccatcattaa acgtttaaac atgcgtcggt tctcctgaaa
    46201 ttatttcgtt gtacccacag gttcagtggt ttcattatta cctggcgcag cagctggcgc
    46261 atcgccacta ttcttattgt catcgccttt actaccgtaa aggaactgac caatgagatc
    46321 ttccagcacc atcgcagact tagtgtcctg aattgtatcg ccatccttca ggatagcagt
    46381 ccccagttcc gggtcttcaa aaccgacgtt taatgccaga tattgttccc ccagtaggcc
    46441 ggaagtacga atgctcagcg aactggtatc tggaatgtgg ttataacgtt gttcaatttc
    46501 cagcgttacg cgtggcagat aggttttcgg gtccagcgta atatccgcca cccggcccac
    46561 aacaacgcca ccaatactga ccggagagcg cgctttcagg ccgccaatgt tatcgaacgt
    46621 cgcataaagc gtgtaggtcg gttcagtacg tatggacgtc acgttcgccg ccttcaggca
    46681 aacaaacaga gccgccagca gtgctgctaa taaaaagata cccacccaaa tttcattttt
    46741 tttcgtttgc atgtactcaa ttcccaaaca tcaatgcggt cagcacaaaa tccagcccca
    46801 gaacagccag agacgagtgg acaacggtgc gagtggttgc ccggctaatc ccggcagacg
    46861 tcgggatggc gtcgtagccg ttaaacaacg aaatccacgt caccgtgatg gcgaacacca
    46921 cgctcttaat cagacagttg accagatcca tacgccagtc gacggcattt tgcattgccg
    46981 accagaagaa cccgctatca atgcctttcc aactgacgcc gaccagagat ccgccccaga
    47041 tccccacggc gacgaaaata accgtcaaca gtggtaatga aataacccca gcccagaaac
    47101 ggggagaaat aacccgacgc agcggatcca ccgccatcat ctccatactg gagagttgct
    47161 ctgtagcgcg catcaggccg atttctgcgg ttagcgccga accagcacgc ccggcaaaca
    47221 acaacgcggc aaccaccggc cccagttcac gcagtagcga taacgccacc agcataccca
    47281 gactggtttc cgcactataa gtggtcagaa ccagataacc ttgcagcccc aacaccattc
    47341 cgatgaacac gccagaaacc acaataatca gcatcgacag gacgccgaca ttatagagct
    47401 ggcgcaccag cagcggcgca tgtttgcgaa attccggttt gccgaccagc gcattgaata
    47461 acattaaccc ggcccgcccg aacgttctca gggttttaat ccctttatgt ccgagcgacg
    47521 ccagcgcatt taacagcatg agtggcttaa ctccctggta aaagatcagc gtgataatcg
    47581 ccggcaggat agcggaacgg aacaggcccg tcagctatcc cgtccagaaa ctgacgtacg
    47641 cgcggatcag gattcgcctg caacgcctgg gcactgccat gagcgacaat ttttttgtcc
    47701 gccaggatcc aggcgtgatc cgcaatactt aacacttccg gcacatcgtg agaaaccacc
    47761 acacaagtca cgcccagcgc gctgttcagc tcagaaatca gcttcaccag tacgcccatg
    47821 gtgatgggat cttgcccaac aaaaggttca tcaaacatga tgagatccgg ctccagcgca
    47881 atcgcacgcg ccagcgctgc acgccgcgcc atcccaccgg aaagttcaga aggcattagt
    47941 ttagccgctc cacgcagccc cacggcctcc agcttcatca tcaccgtact atgcaacaat
    48001 ggcgcgggaa gttgggtatg ttcgcgcagt ggataggcga cgttgtcaaa tacgttcata
    48061 tcagtgaaca acgccccgga ctgaaataac atgctcatcc gtttgcgcac tgtatacagg
    48121 cgcgaacgag acatcgccgg aatattctca ccatcgaaaa ggatctcacc atgatctggt
    48181 gcgatttgcc cgccaatcag acggagtagc gtcgttttac cgatgcccga tggccccatg
    48241 atcgccgtga tcttccctcg cggcacggtc agggaaatat tatcgaagat gcagcgattg
    48301 ccacgcgtaa aactgacatc gcgcatatcg actaaattcg ccacagactg ctccataatt
    48361 cacccttcgt cttgcgttga ttttctaagc atggcgctca atttaacctt gaacccaaca
    48421 tatttacaga atattacccg ccgtggttag cgaaagctgg catttgtttt actttttagc
    48481 cgcataaagt caaaattaag aatccgttac ggctttctga aaatcttcag cggaccggcg
    48541 agtatacctg aagaaaggac gttagatgct tttagctacg gcactgttaa ttgttggttt
    48601 acttttggtc gtttacagtg ccgaccgcct ggtttttgcc gcgtctattc tttgccgaac
    48661 ctttggcatc ccgccgctga tcatcggcat gacggtggtc agtattggta catcgttacc
    48721 agaaatcatc gtctcgcttg ccgcgtctct gcacgaacaa cgcgatttag ccgttggtac
    48781 agccctcggc tcaaacatta tcaatatttt gctgatcctc ggtctggctg cgctggttcg
    48841 tccttttacc gtccattccg atgttctgcg tcgtgaatta cccttaatgt tgttggtcag
    48901 cgtagtggcc ggttccgtac tctatgacgg acaacttagt cgcagcgatg gtatctttct
    48961 cctctttctg gctgtgctat ggctgctgtt cattgttaaa cttgcacgtc aggctgaacg
    49021 tcaggggact gacagcctga ccagagagca gcttgcagag ctgccgcgtg acggcggatt
    49081 gcccgtcgcg tttttatggc tcggcattgc gcttatcatc atgccagtgg ccacgcggat
    49141 ggtggttgat aacgccacgg tgctggcgaa ttactttgcc atcagcgagt tgacgatggg
    49201 tctgacggca attgctatcg gaaccagcct gccggaactg gcaaccgcaa tagcgggggt
    49261 tcgcaaaggt gaaaacgaca ttgctgtcgg aaatatcatt ggcgcaaaca tttttaatat
    49321 tgtcatcgtg ttgggtttac ccgcgctgat aacaccagga gagattgatc cattggcgta
    49381 cagtcgtgac tacagcgtga tgttgctggt gagcattatt tttgcgttgc tgtgctggcg
    49441 gcgctccccg caaccgggcc gtggtgtagg ggtattatta actggcggat ttatcgtatg
    49501 gctggcgatg ttgtactggt tatcgccaat actcgttgaa taactggaaa cgcattatgt
    49561 cgcacgtaga gttacaaccg ggttttgact ttcagcaagc aggtaaagaa gtcctggcga
    49621 ttgaacgtga atgcctggcg gagcttgatc aatacatcaa tcagaatttc acgcttgcct
    49681 gtgaaaagat gttctggtgt aaagggaaag ttgtcgtcat ggggatgggg aaatcggggc
    49741 acatcgggcg caaaatggcc gcaacgtttg ccagcaccgg tacaccttca tttttcgtcc
    49801 atcctggtga agccgcgcat ggtgatttag gcatggtcac cccacaggat gtggtgattg
    49861 ctatctctaa ctcaggtgaa tccagcgaaa tcacggcctt aattccagtg cttaagcgtc
    49921 ttcacgtacc gttaatctgc atcaccggtc gcccggagag cagcatggcg cgcgccgcag
    49981 atgtgcatct gtgtgttaaa gtagcgaaag aagcctgtcc gttagggctg gcaccgacca
    50041 gcagcaccac cgccacgctg gttatgggcg atgccctcgc tgtcgcgctg ttaaaagcac
    50101 gcggctttac tgctgaagat tttgcgctct cacacccagg cggcgcactg ggtcgtaaac
    50161 ttctgctgcg cgtaaacgat attatgcata cgggcgatga gatcccgcat gttaagaaaa
    50221 cggccagtct gcgtgacgca ttgctggaag ttacccgcaa aaatcttggt atgactgtca
    50281 tttgcgatga caatatgatg attgaaggca tctttaccga cggtgattta cgccgtgtct
    50341 tcgatatggg agtggatgtt cgtcagttaa gtattgccga tgtgatgacg ccggggggaa
    50401 tacgcgtgcg ccctggcatt ctggccgttg aggcactgaa cttaatgcag tcccgccata
    50461 tcacctccgt gatggttgcc gatggcgacc atttactcgg tgtgttacat atgcatgatt
    50521 tactgcgtgc aggcgtagtg taaagattca aggataaaca acaatgagca aagcaggtgc
    50581 gtcgcttgcg acctgttacg gccctgtcag cgccgacgtt atagcaaaag cagagaacat
    50641 tcgtctgctg atcctcgacg ttgatggcgt actgtcagat ggcctgattt atatgggcaa
    50701 taacggcgaa gagctgaaag cgttcaatgt tcgtgacggt tatggcattc gttgtgcgct
    50761 cacctctgat attgaagtcg ctatcattac cgggcgaaag gctaaactgg tagaagatcg
    50821 ttgtgccaca ttggggatca ctcacttgta tcaggggcag tcaaacaaac tgatcgcctt
    50881 tagcgaactg ctggaaaaac tggcgattgc cccggaaaat gtggcttatg tcggcgatga
    50941 tctcatcgac tggccggtaa tggaaaaagt gggtttaagc gtcgccgtgg ccgatgctca
    51001 tccactgttg atcccgcgcg ccgattatgt gacgcgcatt gctggcggtc gtggcgcagt
    51061 gcgagaagtt tgcgacttat tactcctggc gcagggcaaa ctggatgaag ccaaagggca
    51121 atcgatatga gtaaagccag acgttgggtt accattgtgc tatcactggc ggttctggtg
    51181 atgatcggca ttaatatggc cgaaaaagac gataccgccc aggtggtcgt caacaacaat
    51241 gatcccacct ataaaagcga gcatacggac acgctcgtct ataacccaga aggggcacta
    51301 agctatcgat tgattgctca acacgttgaa tattattccg atcaggccgt ttcgtggttt
    51361 acgcagccgg tacttaccac gtttgataag gataaaatcc cgacatggtc cgtaaaagca
    51421 gataaagcca agctgaccaa tgaccggatg ctctatttat atggacacgt tgaagtcaac
    51481 gcacttgtgc cggactctca acttcgcaga atcacgacgg ataacgcgca gatcaatctg
    51541 gtgacgcagg atgttacctc tgaagacctc gtcacgttat acggaacaac atttaactcc
    51601 agcggtctga aaatgcgcgg caacttacgc agcaagaacg ccgagctgat tgaaaaggtt
    51661 agaacatcct atgaaattca aaacaaacaa actcagcctt aatcttgtgc ttgccagctc
    51721 acttctggcc gccagcattc cggcatttgc cgtaaccgga gacactgatc agccgatcca
    51781 cattgaatcg gaccagcaat ctcttgatat gcaaggcaac gtggttacct ttaccggtaa
    51841 tgtcatcgtc acccagggca ccatcaaaat taatgccgac aaagtggtcg ttacccgtcc
    51901 gggcggcgaa caaggtaaag aagtgattga cggctacggt aaaccggcaa cgttctacca
    51961 gatgcaggac aacggtaaac ccgttgaagg tcatgcttcc cagatgcact acgaactggc
    52021 aaaagatttt gtcgttctga cgggtaatgc ttatctgcag caggtcgata gcaacattaa
    52081 gggcgataag atcacttacc tggtgaaaga gcagaaaatg caggctttca gcgacaaagg
    52141 caagcgcgta acaaccgttc tggtgccgtc gcagctgcag gacaaaaaca acaaaggcca
    52201 gaccccggca cagaagaagg gtaattaatt cgttatggca acattaactg caaagaacct
    52261 tgcaaaagcc tataaaggcc gtcgcgtggt agaagacgtc agcctgaccg tcaactccgg
    52321 ggaaattgtc ggtctgctgg ggccaaacgg tgccggtaag accaccactt tctatatggt
    52381 tgttggcatt gtgccgcgcg atgcgggcaa catcattatt gatgatgacg atatcagtct
    52441 gctgcctctg catgcacgcg cgcgccgcgg tatcggctat ctgccacagg aagcctccat
    52501 tttccgtcgc ctcagcgttt acgataacct gatggcggta ctgcaaattc gtgacgactt
    52561 gtctgctgaa caacgtgaag accgcgcgaa cgagctgatg gaagagtttc acattgagca
    52621 cctgcgtgac agcatggggc agtcactctc cgggggtgaa cgtcgccgtg tagaaattgc
    52681 ccgcgcactg gctgcgaatc cgaaatttat tctactcgac gaaccgtttg ccggggttga
    52741 cccgatctcg gttatcgaca ttaaacgcat cattgaacac ctgcgcgaca gcggcctggg
    52801 cgtactgatc actgaccaca acgtgcgtga aacactggcg gtttgtgaac gcgcttatat
    52861 cgtcagtcag gggcatttga ttgcccacgg cacgcctaca gaaatcttac aagacgaaca
    52921 cgttaagcgt gtataccttg gggaagactt cagactctga tagggtagaa gtttgcgacg
    52981 ttttagcagg agagtacgat tctgaacatg aagcaaggtt tgcaactcag gcttagccaa
    53041 caactggcga tgacgccaca gcttcaacag gcgattcgtc tgttgcagtt gtcgacgctg
    53101 gaacttcagc aggagctaca gcaggcgctg gagagtaatc cgctgcttga gcaaatcgac
    53161 actcatgaag aaatcgacac cagcgaaacg caagacagtg aaacgctgga caccgccgac
    53221 gcgctcgaac aaaaagagat gccggaagag ctgccgctcg atgccagttg ggacaccatt
    53281 tacaccgctg gtacaccatc cggcaccagc ggtgactaca ttgacgatga gctgccggtc
    53341 tatcagggcg aaacgacgca gaccttgcag gattacctga tgtggcaggt cgagctgaca
    53401 ccgttttccg acactgaccg cgctattgct acctctatcg tcgatgccgt tgatgacacc
    53461 ggttatctga ctgtcccgct ggaagatatt ctcgaaagta tgggcgatga agagatcgac
    53521 atcgacgagg ttgaagccgt ccttaagcgg atccaacggt ttgatccggt cggtgtagcg
    53581 gcaaaagatc tgcgtgactg cctgctaatc caactctccc aattcgataa aaccacgccg
    53641 tggctggaag aggccagact gatcattagc gatcatctcg atctgttagc caatcacgac
    53701 ttccgcactt taatgcgcgt cacgcgtctg aaagaagatg tgctgaaaga agccgtcaat
    53761 ctgatccagt cgctcgatcc gcgccccggg cagtcgatcc agactggcga acctgagtat
    53821 gtcattccag atgtgctggt gcgtaagcat aacggtcact ggacggtaga actcaacagt
    53881 gacagcattc cgcgtctgca aatcaaccag cactacgcct cgatgtgcaa taacgcgcgc
    53941 aacgatggtg acagccagtt tatccgcagc aatctgcagg atgccaaatg gttgatcaag
    54001 agtctggaaa gccgtaacga tacgctactg cgcgtgagtc gctgtatcgt tgaacagcag
    54061 caagccttct ttgagcaagg tgaagaatat atgaaaccga tggtactggc cgatatcgcc
    54121 caggctgtcg aaatgcatga atcgacgata tctcgcgtga ccacgcaaaa atacctgcat
    54181 agtccacgag gcatttttga actgaagtat ttcttttcca gtcacgtcaa taccgagggc
    54241 ggcggcgaag cttcctccac ggcgattcgt gcgctggtga agaaattaat cgcggcggaa
    54301 aacccagcga aaccgttgag cgacagcaag ttaacctctt tgctgtcgga acaaggtatc
    54361 atggtggcac gccgcactgt tgcgaagtac cgagagtctt tatccattcc gccgtcaaac
    54421 cagcgtaaac agctcgtttg acccaaccga taaggaagac actatgcagc tcaacattac
    54481 cggaaataac gtcgagatca ccgaggcact gcgcgaattt gttagagcca aatttgccaa
    54541 acttgagcaa tattttgacc gaatcaacca ggtctatgtt gttctgaaag tggagaaagt
    54601 cacccacacc tcagatgcaa cactgcatgt aaacggtggt gaaattcatg ccagcgcgga
    54661 aggtcaggac atgtacgctg ccattgatgg cttaattgat aagctggcac gccagttgac
    54721 caaacataaa gataaactga aacaacacta attgtccggg caattagcat gtgcatggcg
    54781 gcctgttgtg cggcacaacg ggccatttgt acggttaatg ctccgagcct gttccactgt
    54841 ttgagtgggc aggttcttag gtgaaattat gacaaataat gatacaactc tacagcttag
    54901 cagtgttctt aacagggaat gtacgcgaag ccgcgttcac tgtcagagca aaaaacgcgc
    54961 cctggaaatc atcagcgagc tggcggcgaa acaacttagc ctgccgcctc aggtggtttt
    55021 tgaagctatc ctgacgcggg aaaaaatggg cagtaccggt atcggcaatg gtattgccat
    55081 tccgcatggc aaactggaag aagatactct gcgcgccgtt ggcgttttcg ttcagctcga
    55141 aacgcctata gctttcgatg ccatcgacaa ccaaccggtg gacttacttt ttgccctgct
    55201 ggtgccggca gaccaaacta aaacgcacct gcatactctg tcgctggtgg cgaaacgtct
    55261 ggcggacaaa accatctgcc gccgtttacg cgcagcccag agcgatgaag agctgtatca
    55321 aatcattacg gataccgaag gtactccgga tgaagcgtag ttattcggta atgtctcttt
    55381 tagacgttgt gaggagaaac agtacatggt actgatgatc gtcagcggac gttcaggttc
    55441 aggtaaatct gtcgccctgc gtgcgctgga agatatgggt ttttactgcg tggataacct
    55501 tcccgtagtg ttgttacccg atctggctcg aaccctggcc gatcgcgaga tttctgccgc
    55561 cgtcagcatt gatgttcgta atatgccgga gtcaccagaa atattcgaac aggcgatgag
    55621 taacctgcct gacgctttct caccgcaact cctgttcctg gatgccgacc gtaatacctt
    55681 aattcgtcgt tacagtgaca cgcgccgact gcatccgctt tccagcaaaa acctgtcgct
    55741 ggaaagtgct atcgacaaag aaagcgattt gctggagcct ctgcgttcgc gagcggatct
    55801 gattgtcgat acctcagaaa tgtccgttca cgagctggct gaaatgctgc gtacccgtct
    55861 gctgggtaaa cgtgaacgcg aactgaccat ggtctttgag tctttcggct tcaaacacgg
    55921 tatccctatc gatgcagatt acgtctttga cgtgcgcttc ttgccgaacc cgcactggga
    55981 tccgaaactg cgtccaatga caggtcttga taaacctgtc gccgcgttcc tcgaccgcca
    56041 cacagaagta cacaatttta tctaccagac gcgaagctat cttgagctat ggttacctat
    56101 gctggaaacc aacaaccgta gctacttgac ggtcgccatt ggttgtaccg gcgggaagca
    56161 ccgttcggtg tatattgcag agcaactggc agactacttc cgctcgcgcg gtaaaaacgt
    56221 ccagtcacgc catcgtacgc tggaaaaacg taaaccatga ccgtcaagca aactgttgaa
    56281 atcacaaaca agctgggcat gcatgcccgg cctgcaatga agctgtttga attaatgcag
    56341 ggttttgacg ctgaagtgct gttacgtaat gacgaaggca ccgaggccga agccaacagc
    56401 gttattgcgc tgctgatgtt ggattctgcc aaaggacggc agattgaagt tgaagcgacc
    56461 ggcccacagg aagaggaagc actggccgcc gttatcgccc tctttaactc tggttttgat
    56521 gaagattaat cttcatcact ttgacataca actcccttca aactcccccc gacaataaga
    56581 aaatcacgta ctgaaatcgt tctcaatcaa cgtcatttgt acattttgtg cgcttttcac
    56641 tttcagaaga accttaagaa aaccttaaga ggcattgttt aggttttgtt taagttaatc
    56701 gaccatactg gagatcgtca gaaaatattt ccaggagatg gcatgattcg cttatctgaa
    56761 caaagtcccc tgggcaccgg aagacatcgg aaatgttatg cgcatccgga agatgcccaa
    56821 cgctgtatca agattgtcta ccatcgtggc gatggtggcg ataaagagat ccgccgtgag
    56881 ttaaagtact acgcgtatct tggtcgccgg ttaaaagact ggagtggaat accgcgctat
    56941 cacggtaccg ttgagacgga ttgcggaacc ggttatgtct acgatgtgat tgcagatttt
    57001 gacggcaaac cctccattac gctgaccgaa tttgctgaac aatgccgtta cgaagaagac
    57061 attgcacaac tgcgccagct actgaaacag ctgaagcgtt atttgcagga taaccgtatc
    57121 gtgacgatgt cgctgaagcc gcagaatatc ctctgtcacc acatcagtga gtcagaggtt
    57181 atcccggtcg tctgcgacaa cattggtgaa agcacattga ttccactggc gacctggtcg
    57241 aagtggtgtt gtctgcgtaa gcaagagcgg ttatggaaac gatttatcgc ccaaccggcg
    57301 ctggctattg ccctgcagaa agatctgcaa cctcgtgaga gcaaaacgct ggccctcact
    57361 tcgcgcgaag cttaatccag ctggtgttgt tgcataaacg gctcaccgcc taactgatac
    57421 atctgccgta aaatccacgc ctgacggcta cgcacgtagc ccgatggcga ggagactttg
    57481 aaacgaagtg gattaggtaa tacagctgcc agtaatgcag cttccgaccg ggtaagtttg
    57541 ctcgcgggtt tgtggaaata acgttgtgcc gcagcttcga cgccaaacac accgtcgcca
    57601 aattcggcga tattcaggta aaccgtcagg atacgctttt tgctccagac tgtttctatc
    57661 cccagcgtta atccagcttc cagccctttt cgtacccagc tacgcccatc ccataaaaag
    57721 agatttttgg ccgtctgctg agaaatcgtt gaagcaccgc gaatacggtt ttcattgcgc
    57781 tcgttgtgcg ccagggcttt ctcaatggaa gcgacatcaa agccccggtg ctcaggaaat
    57841 ttctgatctt ctgcggcaat caccgccagt cccatccacg gcgagatttg atccatactg
    57901 acccagtcag aatgtgccac gtaacgaaaa ttgccatgca gccaggcgct gacctgtcgc
    57961 tcgaccatta ccgctgagaa gggaacaggc gcaacactaa acaacgcgat gcccccgccc
    58021 cagaaaacgg cgaggacaac cattaaccgc aaaagaaaac ggcgaacgaa actaaacacc
    58081 gttaagcggc ttttactcat tcagccagaa ccagcacgcg ggaaaccagc ttatcaatgc
    58141 cgctcgccgc ttctgcaatg ttctgcgcca gcatatatgc tggggtggtg acaatcttat
    58201 tgtcttcatc aaccacgata tcatcgacag gacagggcac atgctccgcg cccatctctt
    58261 ccagcacttc tgcggtatcg atatcagtac cgatggtcaa acgcagcggg aaatcgaaaa
    58321 ttttcggcag catcgccggg gcaatacaca taaaaccaag cggttttccg gcctgatgca
    58381 tcgcttgtgc cagcgccttt aattcacggt caacggtgca ttcgctacca agagtggcaa
    58441 aattgcttaa attcttcgcc gcgccaaacc cccccggcac aatcaacgca tccagttcag
    58501 cggcatcggc ctgggccaga ggacggattt caccgcgcgt tattcgtgcc gcttcaatca
    58561 gcacgttgcg cgtttccgtc atcgcttcgc cagttaaatg gttgataaca tcaacctgct
    58621 gcttatcagg tgcaaagcag accgcctgcg caccgctgcg tgaaatagct aacaacgtca
    58681 acaccgcttc atgaatttca gaaccgtcat agacgccgca tccgctcaga attacgccaa
    58741 ttttcttcat tgtgatcatc ctttcgcaat tgactgaaac acattaattt ttttaataaa
    58801 aatggtacgc atcacacatt taactgattc atgtaacaaa tcatttaagt tttgctatct
    58861 taactgcgtg cggcctgaaa aacagtgctg tgcccttgta actcatcata ataatttacg
    58921 gcgcagccaa gatttccctg gtgttggcgc agtattcgcg caccccggtc tagccggggt
    58981 cattttttag tggcttttgc cacccacgct ttcagcactt ctacgtcgtg acgccactct
    59041 tctttcatct cttcaatcca ttcaccgacg ttatcttccc aggcaggaag gtcaggagac
    59101 tgaatttgct gacccagctg ttgcagatgg cgtaacccca ctgaccccgc cgcaccttta
    59161 attttatgtc cttcctcaac aatgcctttt ttatcctgcg ccgtcagatt cgactccagc
    59221 acgctgacat agcccggcat catcttctca aacaccgcta acccgtcggt gatcagcttc
    59281 ggtcctacaa gttcgagata ctgttccagc atgggaatat cgagcaatgc ttctgattta
    59341 ctgttctctt ctgtcgtcac cgtactctcc tcatcatcct gggtatccca gaatttcttg
    59401 atcatcgcgg ttagcgccgg aaccgaaagc ggcttactca gcacatcatc cattccagca
    59461 ttgaggtact cttgtttgtc tttcagcacg ttagcggtta aggccaccag cggcggtaaa
    59521 tcctcgcgcg gataacgctt cgtcagttca cgagagatat ccagcccggt catatctggc
    59581 aactgaatat ccagcaacac caggtcgtat tcgcccggtt taaacatctc cagcgccgcc
    59641 ttgccggtca tggcgacatc aacgctgtta cctaattttt ccagcacaga acgcgcaaca
    59701 atcacgttca gttcaatgtc ttccaccagc agcacattca gcgccggtaa aggcatatcg
    59761 tcttcatcaa acgcatcatc gacctcttct gctaccgacg gtgcgtggat cgtcaacgta
    59821 aaggttgaac ctttgccctg ttcgctggta accgtaatat cgccgcccat atttttcgcc
    59881 agacgacgag aaacggccag accaataccg gtgccggtgg caggtttacc gccatgactg
    59941 tctttcacct ggtaatacat ggcgaaaatt ttatccagct catcctgcgg aatgccgata
    60001 ccagagtctt ccacttcaaa atgcagcata tcgccttcat cgtagcgcac gcgcacggta
    60061 acctggcctt gctgggtgaa tttgacggcg ttactgatga ggttccacag gatctgccgt
    60121 aaacgcgtcc cgtcggtaat gacctgatgc ggtaatggca gcgtcggctc caggttaaag
    60181 cgcaatcctt tttgttgcgc ctgcaatgcg gagagatttt ccagatcggc aaggaagctg
    60241 gtgaaatcaa ccggttgatt atcaagctgg accttgcgcc gttccatctt atccatgtcg
    60301 ataatatcgt taaagatatt ccccagcgtg acggccgaaa catggatggt cttgagatat
    60361 ttttcctgct cggcggtgag ttcggtatcc agcagaatgc ggctcagacc gacgataccg
    60421 ttcagcggtg tacgcaattc gtgactgatg gtggagataa acgtcgtttt gtcgcggctg
    60481 gcccgttcaa gcgcatcctg ataccgctta cgctcggtaa tgtcgcgacc aaagcccatc
    60541 aaaccgtgac gtttacccac gcggtcgtag tacggcactt tacggatttc aaagcaggct
    60601 ttgcgcccgt ccgggtaatc cagccactgt tcataggtca gtgacacatt atgacggaac
    60661 actttttcat cggtttcaat gacttttgcg gcggcttccg gtgagtaaac atcagcaggt
    60721 ttcaggtgaa ccagttgttt ttcgcttttt ccggtcagca gctccatcgc gcggttacag
    60781 ccggaaaact ctttatcttc gttacgataa aaaaccaggt cgggtgaagc atcaaggaag
    60841 gaacgtaaga atgaggattg ctgctcgagc tgaatttgtg tctcttcgcg ctctttgatt
    60901 tcaattttca gttggccgaa ggtttcctgc agttctgctt ccgctttttc acgaacggca
    60961 atttcctgat ttagctgggc aatattatct tttaactgaa cgttgaggct caaatcgcgc
    61021 tcgcgcatct cctccagttt ttgcaccagc cgtgacagac gttgtcgtga ctcctccagt
    61081 tgctcgacga ccaccgatag aaagtagacc gcccacggcg taatcagcaa accaaagaag
    61141 atagaacgaa taacatcaat gctttcgacc tgaccatgca gcaccatggt taccgccatt
    61201 tgtaccacaa tggcaagaac gacgagggcc agcgccagca acattgagaa gcgcaccaga
    61261 cctaacttca tcatcaggtc aacataatac tgcgccagca gacgaatttg cttcattagg
    61321 gaattccttc acgacaacct gccccaataa tacccaattc tgacagttac gttataaatt
    61381 gtgtgagaaa tgcggaattc ccctcaacga cctactccgt tggaggtagc cacggacgtc
    61441 ccagcgccga tccctgtacg ccatgttcat tcagatagcg atccagctcg accattcccg
    61501 tccatcgatt ttcgcaccac agcggagcaa gcagcgtcgg gcgacgggcg ctggcggaaa
    61561 tgcggtggta gatcacttcc ggtggcgtat ggcgaatcat ttctccggca gtgagcgtgt
    61621 aatcctccag ttcaataccg ttcaaacgcc ccgcttccca ggctttcgcc ataatgctgc
    61681 ctttcacaat atgcagcgga tgcagcttta tgccgtccac gccggtttca accactcgct
    61741 ccagcgtttg caaacattca gcctgccctt caccaggcag gccgacaatt aagtgggaac
    61801 acaccttcag cccgcgctga cgtgccagct gggttgtacg ctgataacag gcaaaatcat
    61861 ggccgcggtt gatgcgatgc agtgttttgt cgtgggcggt ttgtagcccc agctccagcc
    61921 acacttcgta accctggtcc ttatattcgc aaagcagatc cagcaccgca tccggcacgc
    61981 agtccgggcg ggtaccaaca cacaaaccga caatattggc ctggctcacc gcctgctgat
    62041 acatagaacg cagcacctga acttccgcaa aggtgctagt atacgcctga aagtaggcca
    62101 gatagcgttt agcgcggtta actaaattcg cctggtgcgc cagttgctcg gcaatggaac
    62161 gatgctgctg cgcttcatcg gcaaacgagg caacattaca gaatgtgcag ccaccacgcc
    62221 cgatggtacc gtcacggtta gggcagctaa aaccgccgtg cagcgtcagc ttatgcacct
    62281 tttgcccata acgacgggtg agatcaccac caaacatatt gactaatttc tgtaactgca
    62341 taatctgata gaccgcgcct tgaaaagagg ccaaagcctg ccatttttag ctcaattcgg
    62401 cgatgacctg gatcaatcgt cccggcctgc ttttatcaac tgcataatca atcaaaatta
    62461 ccgaaatttc atgcataatc acataaatca cttttgctta tcttgtgtca gattttttta
    62521 tctccttatg gattttaggc aaaaacagta gcatgaaacg tcattaccaa ttaaggcagt
    62581 ataaaatgct ggttttctcg tcagttcaag gtaggataag ggttaacacg cctttatgac
    62641 agtcaggaat tgactgtttc tctaacgact tcccttttag ccttaaagat aaaattcatt
    62701 ttaatttcag ttacttaata aagaattttg cgctaaagca catttctgta ccaataagct
    62761 tgccatttga cctgtatcag ctttcccgat aagttggaaa tccgctggaa gctttctgga
    62821 tgagcagcct gctcatcata tttatgcagt aattgagatc ccctcttcac cgtattaacc
    62881 gatgcgaaaa ggacaacaag ggggcgaata cgaggcgcgc gtatgacacg caacccccgt
    62941 cgccacgctc tttctgtgcc cgtgcgcagc ggttcggaag tggggttccc gcagagcctg
    63001 ggggaggttc acgatatgtt gtacgataaa tcccttgaga gggataactg tggtttcggc
    63061 ctgatcgccc acatagaagg cgaacctagc cacaaggtag tgcgtactgc aatacacgca
    63121 ctggcccgca tgcagcaccg tggcgcgatt ctcgccgatg gtaaaaccgg tgacggttgc
    63181 ggcttgctgt tacaaaaacc ggatcgcttt tttcgcatcg ttgcgcagga gcgcggctgg
    63241 cgtttagcaa aaaactacgc tgtcgggatg ctcttcctga ataaagatcc tgaactcgcg
    63301 gctgccgcac gccgcatcgt tgaagaagag ctgcaacgcg aaaccttgtc gattgtgggc
    63361 tggcgtgatg tccccactaa cgaaggcgtg ctgggtgaaa tcgccctctc ctctctgccc
    63421 cgcattgagc aaattttcgt taacgctccg gcaggctggc gtccgcggga tatggagcgc
    63481 cgtctgttta tcgcccgccg ccgcattgaa aagcgtctcg aagccgacaa agacttctac
    63541 gtctgtagcc tgtcgaatct ggtgaacatc tataaaggtc tgtgtatgcc ggcggatctg
    63601 ccgcgctttt atctggatct tgcggacctg cgtctggaat cggccatctg cctgttccac
    63661 cagcgcttct ccactaacac cgtaccgcgc tggccgctgg cgcagccgtt ccgctacctg
    63721 gcgcataacg gtgaaatcaa caccatcacc ggtaaccgcc aatgggcgcg tgcgcgtacc
    63781 tataaattcc agacgccgct tatccctgat ctgcacgacg ccgcaccgtt cgtcaacgaa
    63841 accggctctg actccagttc gatggataac atgctggaac tgctgctggc aggcgggatg
    63901 gatatcatcc gcgccatgcg tctgttagtg ccacccgcct ggcagaacaa cccggatatg
    63961 gacccggaac tgcgtgcctt ctttgacttt aactccatgc atatggagcc gtgggatggc
    64021 ccggcgggca tcgtgatgtc cgacggtcgt tttgccgcct gtaacctcga ccgtaacggt
    64081 ctgcgtccgg cgcgctacgt catcaccaaa gataagctca tcacctgcgc ctctgaagtc
    64141 ggtatctggg attaccagcc tgacgaagtg gtcgaaaaag gccgcgtcgg gccaggcgaa
    64201 ctgatggtta tcgacacccg cagtgggcgt attctgcact cggcagaaac cgatgacgat
    64261 ctgaaaagcc gccatccata taaagagtgg atggagaaaa acgtccgccg actggtaccg
    64321 tttgaagatc tgcccgatga agaagtgggt agccgcgaat tggacgacga cacgcttgcc
    64381 agctaccaga aacagtttaa ctacagtgcg gaagagctgg actccgtaat tcgcgtactg
    64441 ggcgaaaacg gtcaggaagc ggtcggttcg atgggcgatg ataccccatt cgccgtgctc
    64501 tccagtcagc cgcgcattat ttacgactac ttccgccagc agtttgccca ggtgactaac
    64561 ccgccaatcg acccgctgcg tgaagcgcat gttatgtcgc tcgccaccag tatcggtcgt
    64621 gaaatgaacg tcttttgcga agcagagggc caggcgcacc gtttaagctt taaatcgccg
    64681 attctgctct actccgattt caaacagctc acgacgatga aagaggagca ctaccgcgca
    64741 gatacgctgg atatcacctt tgacgtcact aaaaccacgc tcgaagcgac agtcaaagag
    64801 ctgtgcgaca aagccgaaaa aatggtacgt agcggcaccg tgctgctggt gctctccgac
    64861 cggaatatcg ctaaagatcg cctgccggtt ccagccccga tggcggttgg cgcgatccag
    64921 acccgtctgg tcgatcaaag cctgcgttgc gatgccaaca tcatcgtcga aaccgccagc
    64981 gcccgcgatc cgcaccactt cgccgtgttg ctgggcttcg gcgcgacggc tatttatcca
    65041 taccttgcct atgaaacgct gggccgcctg gttgacaccc atgcgattgc caaagattat
    65101 cgtaccgtga tgctcaacta ccgtaacggc atcaacaaag gcttgtacaa aatcatgtcc
    65161 aaaatgggca tctccaccat cgcctcttac cgctgctcga aactgtttga agcggtcggt
    65221 ctgcacgatg atgtagtggg cctgtgcttc cagggggcgg tcagccgcat tggtggggcg
    65281 agctttgaag acttccagca ggatctgctg aacctgtcga aacgtgcctg gctggcgcgt
    65341 aagcccatca gccagggcgg cctgctgaaa tacgtccacg gcggcgaata ccacgcttac
    65401 aacccggacg tggtgcgcac gctgcaacag gcggtacaaa gcggcgagta cagcgactat
    65461 caggaatacg cgaagctggt taatgagcgt ccggcaacca cgctgcgcga tctgctggca
    65521 attacgccgg gtgaaaacgc ggtcaacatt gctgatgttg aaccggcaag cgaactgttt
    65581 aaacgctttg ataccgccgc gatgtctatc ggcgcgttaa gcccggaagc ccacgaggcg
    65641 ctggcggaag cgatgaatag catcggcggt aactcgaact ccggtgaagg cggcgaagac
    65701 ccggcgcgct atggcactaa caaagtgtcg cgcatcaagc aggtggcttc tggtcgcttc
    65761 ggcgttactc cggcgtatct ggtcaatgcc gacgtcattc agattaaagt cgcccagggc
    65821 gcgaagccgg gcgaaggcgg tcagttgccg ggcgacaaag tcactcctta catcgccaaa
    65881 ctgcgctatt cggtgcccgg agtgacgctg atctccccgc cgccgcacca cgatatctac
    65941 tctatcgagg acttagcgca gctcattttc gacctcaagc aggttaaccc gaaagcgatg
    66001 atctccgtga agctggtttc cgaaccgggc gtaggcacca tcgcgactgg cgtggcaaaa
    66061 gcttatgccg atttaatcac catcgcaggc tatgacggtg gcaccggcgc aagcccgctg
    66121 tcgtcagtga aatacgcagg ttgcccgtgg gagctggggc ttgttgaaac ccagcaggcg
    66181 ctggttgcca atggtctgcg tcataagatc cgtttgcagg tcgatggcgg cctgaaaacc
    66241 ggtgttgata tcatcaaagc ggcgattctc ggcgcagaaa gcttcggctt cggcactggc
    66301 ccaatggtcg cgctcggctg taaatatctg cgtatttgcc acctgaacaa ctgcgcaacg
    66361 ggtgtggcaa ctcaggatga caaactgcgt aagaatcact atcacggcct gccgttcaag
    66421 gtgacgaatt actttgagtt tatcgcccgt gaaacccgcg agctgatggc acagctgggg
    66481 gtaacgcggc tggtggatct gattggtcgc accgacctgc tgaaagagct ggacggtttc
    66541 accgccaaac agcagaaact ggcgctgtcg aagctgctgg agaccgccga accgcatcca
    66601 ggtaaggcac tctactgcac cgaaaacaac ccgccgtttg ataacggcct gctgaacgcg
    66661 cagttgctgc aacaggcgaa accgtttgtc gatgaacgcc agagcaaaac cttctggttc
    66721 gatatccgca ataccgatcg ctccgtgggc gcgtcgcttt caggctatat cgcccagacg
    66781 cacggcgatc aggggctggc agccgatcct atcaaagcgt acttcaacgg caccgcaggc
    66841 cagagtttcg gtgtatggaa cgcgggcggc gtggaactgt acctgaccgg ggatgccaac
    66901 gactatgtcg gtaaaggcat ggcgggcggc ttaatcgcca ttcgtcctcc ggttggttcc
    66961 gccttccgca gccatgaagc aagtattatc ggcaacacct gcctgtatgg cgcgaccggt
    67021 ggtcgtctgt atgccgcagg ccgcgcgggt gaacgtttcg gcgtgcggaa ctccggtgct
    67081 atcaccgtgg tagaaggcat tggcgacaac ggctgtgaat atatgacggg cggtattgtc
    67141 tgtattctgg gtaaaaccgg cgttaacttc ggtgcgggca tgaccggcgg cttcgcttac
    67201 gttctcgatg aaagcggtga tttccgcaaa cgcgttaacc cggaactggt cgaggtctta
    67261 aacgttgacg atctggcgat ccatgaagag catctgcgcg gtcttatcac cgagcatgtt
    67321 cagcatactg gctctcagcg cggtgaagag attctggcga actggtcaac cttcgccact
    67381 aaatttgcgc tggttaaacc gaagtccagt gatgtaaaag cactgctggg tcaccgtagt
    67441 cgtagcgcag cagagttgcg cgtgcaggcg cagtaagggg tagcaacaat gagtcagaat
    67501 gtttatcaat ttatcgacct gcagcgcgtt gatccgccta agaaaccgct gaagatccgc
    67561 aaaattgagt ttgttgaaat ttacgagcag ttttccgaag gccaggccaa agcgcaggct
    67621 gaccgctgcc tgtcgtgcgg caacccatac tgcgagtgga aatgtccggt acacaactac
    67681 atcccgaact ggctgaagct cgccaacgag gggcgtattt ttgaagcggc ggaactgtcg
    67741 caccagacca acaccctgcc ggaagtttgc ggacgagtct gcccgcaaga ccgtctgtgc
    67801 gaaggttcct gcactctgaa cgatgagttt ggcgcggtga ccatcggcaa cattgagcgt
    67861 tatatcaatg ataaagcgtt cgaaatgggc tggcgtccgg atatgtccgg cgtgaagcaa
    67921 accggtaaaa aagtggcgat tatcggcgca ggcccggcag gtctggcgtg tgcggatgtc
    67981 ctgacgcgta acggcgtaaa agccgttgtc ttcgaccgtc atccagaaat tggcgggctg
    68041 ctgaccttcg gtattccggc cttcaagctg gaaaaagagg taatgacgcg tcgccgtgaa
    68101 atcttcaccg gcatgggtat tgaattcaaa ctcaataccg aagtgggccg cgacgtgcag
    68161 ctggacgatc tgctgagtga ttacgatgcc gtcttccttg gcgtcgggac ttatcagtca
    68221 atgcgcggcg gtctggaaaa caaagacgcc gatggcgtgt acgcagcgct gccgttcctt
    68281 atcgccaaca ccaaacagtt aatgggcttt ggtgaaaccc gcgacgaacc gttcgtcagc
    68341 atggaaggca aacgcgtggt ggtccttggc ggtggcgaca ctgcgatgga ctgcgtgcgt
    68401 acgtccgtgc gccagggagc gaagcacgtt acctgtgcct atcgtcgtga tgaagagaac
    68461 atgccgggtt cccgccgcga agtgaaaaac gcgcgggaag aaggcgtaga gttcaaattc
    68521 aacgtccagc cactggggat tgaagtgaac ggtaacggca aagtcagcgg cgtaaaaatg
    68581 gtacgtaccg aaatgggcga accggatgcc aaaggccgtc gccgcgcgga gatcgttgca
    68641 ggttccgaac atatcgttcc ggcagatgca gtgatcatgg cgtttggttt ccgtccacac
    68701 aacatggaat ggctggcaaa acacagcgtc gagctggatt cacaaggccg catcatcgcc
    68761 ccggaaggca gcgacaacgc cttccagacc agcaacccga aaatctttgc tggcggcgat
    68821 atcgtccgtg gttccgatct ggtggtaacc gctattgccg aaggtcgtaa ggcggcagac
    68881 ggtattatga actggctgga agtttaagct ctgtcccagc gccgcctcct cagaaaagag
    68941 tcggcgctga aattctcctt tctttctgga aagcgcctcg cataatctga agaaaaccaa
    69001 tgtaatacgc tcatctggat tgttaccggt agatgcccgg cgtatagctg attccattat
    69061 tcaacgcagc gccatataaa gggacagata atggaatcgc tctcagagag aacctcaaca
    69121 ggctaccagc aaatccacga cggtattatt cacctggtcg atagcgcccg gacggaaacg
    69181 gtacgtagcg ttaacgcgct gatgaccgcg acatactggg aaattggccg acgaattgtc
    69241 gaatttgaac aaggtggcga ggcaagggct gcgtatggtg cgcagctaat caagcgacta
    69301 tcaaaggatt taagtctaag gtataagcgt gggttctctg caaaaaactt acgccaaatg
    69361 agg
//
LOCUS       DAJVUK010000005        66347 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.005, whole genome shotgun sequence.
ACCESSION   DAJVUK010000005 DAJVUK010000000
VERSION     DAJVUK010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 66347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66347
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.005"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(128..607)
                     /gene="folK"
                     /locus_tag="OQQ57_000341"
     CDS             complement(128..607)
                     /gene="folK"
                     /locus_tag="OQQ57_000341"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HCS1955220.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQDRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDELSKW"
     gene            complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="OQQ57_000342"
     CDS             complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="OQQ57_000342"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HCS1955221.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="OQQ57_000343"
     CDS             complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="OQQ57_000343"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001432381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HCS1955222.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQGLSYYCTCTRARIQSIVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQVEAHWQDFS
                     VEQILQSAVKNWTLTAVPESAIVNSTFSNASC"
     gene            complement(3024..3479)
                     /gene="dksA"
                     /locus_tag="OQQ57_000344"
     CDS             complement(3024..3479)
                     /gene="dksA"
                     /locus_tag="OQQ57_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002209354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HCS1955223.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="OQQ57_000345"
     CDS             complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="OQQ57_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HCS1955224.1"
                     /translation="MEFSPLLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATRGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMNVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAEGMALKKSLPVTL"
     gene            complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="OQQ57_000346"
     CDS             complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="OQQ57_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HCS1955225.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALMQ"
     gene            4980..7409
                     /gene="hrpB"
                     /locus_tag="OQQ57_000347"
     CDS             4980..7409
                     /gene="hrpB"
                     /locus_tag="OQQ57_000347"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HCS1955226.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH
                     PGINGKIILLEPRRLAARNVAQRLEELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF
                     LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRL
                     LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG
                     NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG
                     RYQLANGMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGLLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQSPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
     gene            7605..10127
                     /gene="mrcB"
                     /locus_tag="OQQ57_000348"
     CDS             7605..10127
                     /gene="mrcB"
                     /locus_tag="OQQ57_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HCS1955227.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRAHLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGLVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWAGRDNNQPTKLYGASGAM
                     SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
                     MQQQPSGNPFDQSSQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            10347..12536
                     /gene="fhuA"
                     /locus_tag="OQQ57_000349"
     CDS             10347..12536
                     /gene="fhuA"
                     /locus_tag="OQQ57_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HCS1955228.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEA
                     LGYTPGVTVSSRGASNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE
                     RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALD
                     DNGEFSYRLTGLARSTNEQQKNSESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLR
                     FSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLT
                     GVDFMRMRNDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEW
                     NKWVFTLGGRYDWSKQATTVRENSYTPTEGYIERNDHQFTWRGGVNYLFDNGISPYFS
                     YSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTKTNNLTA
                     DPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQV
                     PEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLA
                     RFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQVVATATFRF"
     gene            12587..13384
                     /gene="fhuC"
                     /locus_tag="OQQ57_000350"
     CDS             12587..13384
                     /gene="fhuC"
                     /locus_tag="OQQ57_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HCS1955229.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSSKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGDTLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            13384..14274
                     /gene="fhuD"
                     /locus_tag="OQQ57_000351"
     CDS             13384..14274
                     /gene="fhuD"
                     /locus_tag="OQQ57_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HCS1955230.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSAEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            14271..16253
                     /gene="fhuB"
                     /locus_tag="OQQ57_000352"
     CDS             14271..16253
                     /gene="fhuB"
                     /locus_tag="OQQ57_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HCS1955231.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWP
                     RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSIGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTATSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
     gene            complement(16288..17568)
                     /gene="hemL"
                     /locus_tag="OQQ57_000353"
     CDS             complement(16288..17568)
                     /gene="hemL"
                     /locus_tag="OQQ57_000353"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HCS1955232.1"
                     /translation="MSKSENLYSAARELLPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPQPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG
                     LLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            17793..19214
                     /gene="clcA"
                     /locus_tag="OQQ57_000354"
     CDS             17793..19214
                     /gene="clcA"
                     /locus_tag="OQQ57_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HCS1955233.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMEALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVVVELFPQYHLEAGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSEILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            19238..19303
                     /locus_tag="OQQ57_000355"
     CDS             19238..19303
                     /locus_tag="OQQ57_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955234.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            19296..19640
                     /gene="erpA"
                     /locus_tag="OQQ57_000356"
     CDS             19296..19640
                     /gene="erpA"
                     /locus_tag="OQQ57_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HCS1955235.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(19687..20310)
                     /locus_tag="OQQ57_000357"
     CDS             complement(19687..20310)
                     /locus_tag="OQQ57_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HCS1955236.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(20348..21147)
                     /gene="btuF"
                     /locus_tag="OQQ57_000358"
                     /pseudo
     CDS             complement(20348..21147)
                     /gene="btuF"
                     /locus_tag="OQQ57_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414700.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
     gene            complement(21140..21838)
                     /gene="mtnN"
                     /locus_tag="OQQ57_000359"
     CDS             complement(21140..21838)
                     /gene="mtnN"
                     /locus_tag="OQQ57_000359"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HCS1955237.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHGKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            21922..23439
                     /gene="dgt"
                     /locus_tag="OQQ57_000360"
     CDS             21922..23439
                     /gene="dgt"
                     /locus_tag="OQQ57_000360"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HCS1955238.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRMKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            23569..24993
                     /gene="degP"
                     /locus_tag="OQQ57_000361"
     CDS             23569..24993
                     /gene="degP"
                     /locus_tag="OQQ57_000361"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HCS1955239.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSTIYLLMQ"
     gene            25148..26305
                     /gene="cdaR"
                     /locus_tag="OQQ57_000362"
     CDS             25148..26305
                     /gene="cdaR"
                     /locus_tag="OQQ57_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CdaR"
                     /protein_id="HCS1955240.1"
                     /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
                     GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR
                     KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDL
                     NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS
                     FGRWDAEDHRKRVEQLITRMKEYGRLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ
                     RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHN
                     VQPLATSKALFIYRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(26394..26780)
                     /locus_tag="OQQ57_000363"
     CDS             complement(26394..26780)
                     /locus_tag="OQQ57_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HCS1955241.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(26942..27754)
                     /gene="yaeI"
                     /locus_tag="OQQ57_000364"
     CDS             complement(26942..27754)
                     /gene="yaeI"
                     /locus_tag="OQQ57_000364"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414706.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase YaeI"
                     /protein_id="HCS1955242.1"
                     /translation="MISRRRLLQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKD
                     NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFS
                     DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFE
                     LVGTGDLWAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP
                     LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV"
     gene            complement(27809..28633)
                     /gene="dapD"
                     /locus_tag="OQQ57_000365"
     CDS             complement(27809..28633)
                     /gene="dapD"
                     /locus_tag="OQQ57_000365"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HCS1955243.1"
                     /translation="MQQLQNIIETAFERRAEITPTNADTVTREAVNQVIALLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGHVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(28664..31336)
                     /gene="glnD"
                     /locus_tag="OQQ57_000366"
     CDS             complement(28664..31336)
                     /gene="glnD"
                     /locus_tag="OQQ57_000366"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HCS1955244.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(31398..32192)
                     /gene="map"
                     /locus_tag="OQQ57_000367"
     CDS             complement(31398..32192)
                     /gene="map"
                     /locus_tag="OQQ57_000367"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HCS1955245.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            32560..33285
                     /gene="rpsB"
                     /locus_tag="OQQ57_000368"
     CDS             32560..33285
                     /gene="rpsB"
                     /locus_tag="OQQ57_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HCS1955246.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            33543..34394
                     /gene="tsf"
                     /locus_tag="OQQ57_000369"
     CDS             33543..34394
                     /gene="tsf"
                     /locus_tag="OQQ57_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HCS1955247.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            34541..35266
                     /gene="pyrH"
                     /locus_tag="OQQ57_000370"
     CDS             34541..35266
                     /gene="pyrH"
                     /locus_tag="OQQ57_000370"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HCS1955248.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            35558..36115
                     /gene="frr"
                     /locus_tag="OQQ57_000371"
     CDS             35558..36115
                     /gene="frr"
                     /locus_tag="OQQ57_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HCS1955249.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            36207..37403
                     /gene="ispC"
                     /locus_tag="OQQ57_000372"
     CDS             36207..37403
                     /gene="ispC"
                     /locus_tag="OQQ57_000372"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HCS1955250.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
     gene            37591..38349
                     /gene="ispU"
                     /locus_tag="OQQ57_000373"
                     /gene_synonym="uppS"
     CDS             37591..38349
                     /gene="ispU"
                     /locus_tag="OQQ57_000373"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HCS1955251.1"
                     /translation="MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFIDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            38362..39219
                     /gene="cdsA"
                     /locus_tag="OQQ57_000374"
     CDS             38362..39219
                     /gene="cdsA"
                     /locus_tag="OQQ57_000374"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HCS1955252.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVSLLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            39231..40583
                     /gene="rseP"
                     /locus_tag="OQQ57_000375"
     CDS             39231..40583
                     /gene="rseP"
                     /locus_tag="OQQ57_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HCS1955253.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GLQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSLLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGAHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            40613..43045
                     /gene="bamA"
                     /locus_tag="OQQ57_000376"
     CDS             40613..43045
                     /gene="bamA"
                     /locus_tag="OQQ57_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HCS1955254.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            43167..43652
                     /gene="skp"
                     /locus_tag="OQQ57_000377"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             43167..43652
                     /gene="skp"
                     /locus_tag="OQQ57_000377"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HCS1955255.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            43656..44681
                     /gene="lpxD"
                     /locus_tag="OQQ57_000378"
     CDS             43656..44681
                     /gene="lpxD"
                     /locus_tag="OQQ57_000378"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HCS1955256.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            44786..45241
                     /gene="fabZ"
                     /locus_tag="OQQ57_000379"
     CDS             44786..45241
                     /gene="fabZ"
                     /locus_tag="OQQ57_000379"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HCS1955257.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            45245..46033
                     /gene="lpxA"
                     /locus_tag="OQQ57_000380"
     CDS             45245..46033
                     /gene="lpxA"
                     /locus_tag="OQQ57_000380"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HCS1955258.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVGIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFSRSTRGLIR"
     gene            46033..47181
                     /gene="lpxB"
                     /locus_tag="OQQ57_000381"
     CDS             46033..47181
                     /gene="lpxB"
                     /locus_tag="OQQ57_000381"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HCS1955259.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDFSVHLLDGMGREAMVASDAALLASG
                     TAALECMLVKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKISHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            47178..47774
                     /gene="rnhB"
                     /locus_tag="OQQ57_000382"
     CDS             47178..47774
                     /gene="rnhB"
                     /locus_tag="OQQ57_000382"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HCS1955260.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMVVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            47811..51293
                     /gene="dnaE"
                     /locus_tag="OQQ57_000383"
     CDS             47811..51293
                     /gene="dnaE"
                     /locus_tag="OQQ57_000383"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HCS1955261.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERVKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGVNAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYASGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            51306..52265
                     /gene="accA"
                     /locus_tag="OQQ57_000384"
     CDS             51306..52265
                     /gene="accA"
                     /locus_tag="OQQ57_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HCS1955262.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSSYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            52364..54473
                     /gene="ldcC"
                     /locus_tag="OQQ57_000385"
                     /pseudo
     CDS             52364..54473
                     /gene="ldcC"
                     /locus_tag="OQQ57_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
     gene            54530..54919
                     /locus_tag="OQQ57_000386"
     CDS             54530..54919
                     /locus_tag="OQQ57_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCS1955263.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     IRVDPYTQKRFTFFNDPDGLPLELYEQ"
     gene            54984..56282
                     /gene="tilS"
                     /locus_tag="OQQ57_000387"
     CDS             54984..56282
                     /gene="tilS"
                     /locus_tag="OQQ57_000387"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HCS1955264.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE
                     QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSREALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSETIVPWQTWLQPLELPA
                     GLGSVQLTAGGDIRPPRADEAVSVRFKSAGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(56331..56591)
                     /gene="rof"
                     /locus_tag="OQQ57_000388"
     CDS             complement(56331..56591)
                     /gene="rof"
                     /locus_tag="OQQ57_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HCS1955265.1"
                     /translation="MLMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
     gene            complement(56578..56778)
                     /locus_tag="OQQ57_000389"
     CDS             complement(56578..56778)
                     /locus_tag="OQQ57_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HCS1955266.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            56944..57489
                     /locus_tag="OQQ57_000390"
     CDS             56944..57489
                     /locus_tag="OQQ57_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HCS1955267.1"
                     /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
                     LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV
                     ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
                     IWLSDDKNNLEVNLTAWQQPS"
     gene            57486..57908
                     /gene="arfB"
                     /locus_tag="OQQ57_000391"
     CDS             57486..57908
                     /gene="arfB"
                     /locus_tag="OQQ57_000391"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCS1955268.1"
                     /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSAKAMRGKVRSGRE"
     gene            57922..58632
                     /gene="nlpE"
                     /locus_tag="OQQ57_000392"
                     /gene_synonym="cutF"
     CDS             57922..58632
                     /gene="nlpE"
                     /locus_tag="OQQ57_000392"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308221.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HCS1955269.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCATGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNKDCSSLGQ"
     gene            complement(58832..59652)
                     /locus_tag="OQQ57_000393"
                     /pseudo
     CDS             complement(58832..59652)
                     /locus_tag="OQQ57_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
     gene            complement(59705..61423)
                     /gene="proS"
                     /locus_tag="OQQ57_000394"
     CDS             complement(59705..61423)
                     /gene="proS"
                     /locus_tag="OQQ57_000394"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HCS1955270.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(61533..62240)
                     /gene="tsaA"
                     /locus_tag="OQQ57_000395"
     CDS             complement(61533..62240)
                     /gene="tsaA"
                     /locus_tag="OQQ57_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HCS1955271.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
                     MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(62237..62641)
                     /gene="rcsF"
                     /locus_tag="OQQ57_000396"
     CDS             complement(62237..62641)
                     /gene="rcsF"
                     /locus_tag="OQQ57_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HCS1955272.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(62759..63574)
                     /gene="metQ"
                     /locus_tag="OQQ57_000397"
     CDS             complement(62759..63574)
                     /gene="metQ"
                     /locus_tag="OQQ57_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HCS1955273.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(63614..64267)
                     /gene="metI"
                     /locus_tag="OQQ57_000398"
     CDS             complement(63614..64267)
                     /gene="metI"
                     /locus_tag="OQQ57_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HCS1955274.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(64260..65291)
                     /gene="metN"
                     /locus_tag="OQQ57_000399"
     CDS             complement(64260..65291)
                     /gene="metN"
                     /locus_tag="OQQ57_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HCS1955275.1"
                     /translation="MIKLSNITKVFHQGTRIIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            65479..66051
                     /gene="gmhB"
                     /locus_tag="OQQ57_000400"
     CDS             65479..66051
                     /gene="gmhB"
                     /locus_tag="OQQ57_000400"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HCS1955276.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFVLVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     ITPEAENAADWVLNSLADLPQAIKKQQKPA"
BASE COUNT        15762 a        16432 c        18204 g        15949 t
ORIGIN      
        1 tgggattgat atttatctgc gggaatttat attatgtttc tgcaaaaatg tttaaactaa
       61 aatttttatt aaggaaagag aggatgtatg attttcagaa aatatttata ttcgtaatat
      121 aaataaatta ccatttgctt aattcgtcaa atgctcttgt atgtaagact tcacgcaacg
      181 tctccccatc aggaaacgcc agctccggtg caatctcaaa cagcggccac agcataaatc
      241 cacgattctt catatcgtag tgcggaacgg tcaggcgttc ggtatttatc acttcattac
      301 caaacagcat gatatcgaga tccagcgtgc gtggtcccca gcgttcagct ttacgaacac
      361 gatcctgttg cagttctatg cgctgtgtat ggttgagtaa ctcttccggg gcgagcgaag
      421 tttcaagcgc cacggcggcg ttgaggtaat cgggttgatc ttgcggcccc agcggtggag
      481 tgcggtaaaa cgaagaaacg gcaagaatgt ggctttcagg gatatcgcct aatgctttca
      541 gggcagcatt gacctgctcc agcggagagg ccagattgct gcctatggca atatacgcca
      601 ctgtcatgcg gtaccctcac gacgcggtgc gcgtttgcgt ggacgacgag tacggcgacg
      661 cggtgacggc tcttcatcca actcgttaag catccctttt tgatctggtg gcgcggaaac
      721 ctggaactca ccccaccatt tcaccagacg ctgcagttca gcgttacgtt caacttcagc
      781 tcgcaaggcc aacaggtcat aagccgcacg gaacttagga tgctccagca gtttccatgc
      841 gcgtttaccc tgacgacggg acatacgcaa ctgcaactgc cagatatcgc gggttaacgt
      901 cgtcagacgt ttcgggattg ccagtgaacg gcaggcttcg tccagcacgt cgttcatcgc
      961 cagcgcgaaa gcgtcgtgat aggtcaggcc gctttcctgg gcgatcttct gtgccgtctc
     1021 cagcagtggg taccagaaca tggcggcaaa caagaacgcc gggttcacgc gcatatcgtt
     1081 atggatacgc gtatcggtat tcttcagcac ctgttcaatg atccgctcca tcgggctgtc
     1141 gccattttcc gtgaagtagc gggtaatggt cgggaacagc ggctggaaca gatgatattc
     1201 acacaacagc ttataggttt cgtaaccgta gcccgcttgt agcagtttaa gcgattcttc
     1261 aaacaggcgt gccggtggga tatcgttcag cagggtagcg aggcgaggga tcggttctgc
     1321 ggtttccggg ctgatgcgca tacccaattt ggcggcaaaa cgtaccgcgc gcagcatacg
     1381 taccggatct tcacggtagc gcgtttccgg gttaccaatc agacggataa cgccgtcctt
     1441 cagatccttc atgccgccaa cgtaatcacg gacggtaaaa tccgctacgc tgtaatacag
     1501 gctgttgata gtgaaatcgc ggcgctgggc gtcttcttcg atggagccga aaatgttgtc
     1561 gcgcagcaac atgccgtttt gcccgcgttg ggaggtcgtg cggtcgctga cgttaccttc
     1621 gtggtgtcca cggaaggttg caacttcgat aatctccggg ccaaacatca catgagccag
     1681 acggaaacgg cgacccacaa ggcggcagtt acggaacagt ttgcgcacct gctcaggcgt
     1741 ggcgttagtg gttacgtcaa aatctttcgg ctttttgcca agtaacaggt cgcgcacgcc
     1801 gccgccaacc agccaggctt cgtatcccgc tttattgagc ctgtacatta ccttcagggc
     1861 attttcactg atatctttgc gggaaatagc atgctgctca cgcgggatca ccgtcacctg
     1921 tggacgggcg actgcctgtt cagcctcgct ttcctcgcgg cttagcacct tgcggcaaaa
     1981 attagcgact cgggtaaaaa tagtacacct cggtagtgtc aaacatcatt caggacaaaa
     2041 aaatagcggc taatcatagc tcagcatgac gcatttgaga atgttgaatt tacaattgcc
     2101 gactcgggca cggcggtcag cgtccagttt ttgacggctg actgaaggat ttgctcgacg
     2161 ctgaaatcct gccagtgtgc ttctacctgc tgccccagaa attgaagtgc cgcgattagt
     2221 accgggcgtg gatcgccttt cggcaacgca ggcgcatgat tctgcttgga aagtttagcg
     2281 ccttgtggat taagcgccag cggcagatga atgtaatctg gcactttcca gccaaaaagc
     2341 tggtacagcg agatttgcct tactgttggt tcaatcagat cagccccacg cactatttct
     2401 gtaacgccct ggaaatgatc atcaaccaca acagccaggt tgtaggcgaa caacccatca
     2461 cggcgatgaa tgataaaatc ttcccgtgcc agtttttcgt cggcgtgaat aatgccgcgc
     2521 agctggtcag taaattgcgt gaccggatgc tgctggcgga tacgcactgc ggcgttgtct
     2581 ggtccatgat gcaacacccg gcaatgaccg tcgtaaatac cgacaatgct ttgaatacgc
     2641 gcacgcgtac aggtgcagta ataacttagt ccttgttcat gtaaccaggc gagtgcttca
     2701 cgataggcgt cgtgacgttg cgattgccag agaacatcgc cgtcccagtg cagaccgtaa
     2761 tgttccagct ggcgcaggat agtttctgcg gcaccgggaa cttcacgagg cgggtcgata
     2821 tcttctatgc gtaccagcca gcgaccttgc cgggcgcgag cctgcaaata gctgccgagc
     2881 gcggcgatca gagagccaaa atgaagctcg ccggaaggag agggggcgaa gcggccaata
     2941 tactgtgtgt ctgtcatctc tttgaacaaa aaataaggcg ggagcatttc ccgcctgtgg
     3001 taaacgtgat ggaacggctg taattagcca gccatctgtt tttcgcgaat ttcagccagc
     3061 gttttgcagt cgatgcacag atcggctgtc gggcgcgctt ccagacggcg aataccaatt
     3121 tcaacaccgc aggattcgca gtagccgaaa tcttcgtctt ccactttttt cagcgtcttc
     3181 tcgatctttt tgatcagctt acgctcgcga tcgcggttac gcagttcgag gctgaactct
     3241 tcttcctggg ctgcacggtc taccgggtcc gggaagttgg ctgcttcatc ctgcatatgt
     3301 gtaacggtgc gatcgacttc atccctgagt tgattacgcc atgcttccag aatacgacgg
     3361 aagtgcgcca gctgggcttc attcatatac tcttcgcccg gcttctcctg atatggttcc
     3421 accccagcga tggcgagaat actcagggac gatgttttac ggttttgccc ttcttgcatg
     3481 ttgcttctcc ttaacacgca ctatcgatcc ccatgttcgg gggaaaaatg aggccgctat
     3541 aaatagcaga tgcttttccg gatagcaatt atctaaacgt aacacttgac aactgtgtga
     3601 ggaaaagcgt atttgcgcac gcgaccagaa tgtaaattaa ccagttactt actttactac
     3661 aatgtaaccg gcagtgattt tttaagagcc atgccttcag cagaaatttc cgctttgtaa
     3721 gccagaattt ctacccccct ctgttgagct tctgacaata gttgcgcgta tttctcatcg
     3781 atgtggcgcg cgggtgaaaa ccgtgtaatg gctgaatgca gcacggcgaa aaagataacc
     3841 gcacgctggc cttcagccgc tacgttcatc aactcccgaa ggtgtttctg acctcgttca
     3901 gtgaccgcat cgggaaaata tccctgttcg ttctccgcta acgtaaccga tttcacttca
     3961 atatagcagt ctggacgcga atccgcctgc aacataaagt caatacggct gcgttctgcg
     4021 ccatatttta cttcgctttt cagcgagcta tagcctgaca gttctgaaat tgattcatta
     4081 aggatagcct ctttcgtcaa cctgttagcc caaagcgtat tgacgcaaat aaatgcgccg
     4141 ctctggcttt gagttagttc ccaggtgtgt gggtatttcc gtttggtgtt gtctgaagtc
     4201 gaataccaga cggtatcgcc acgcgttgca caaccggtca tcgcacccgt attcgggcag
     4261 tgtagcgtta attcgcgacc atcgggtgtg atcacatcgg ctaaaaaacg tttgtaacgc
     4321 tgaattagcg tcgcgcgctg tagaagggga gagaattcca ttgcgacaat ccttgttatt
     4381 gcattagcgc ccagcgtttt agcggcgtgt agcgtgtgcg tccacgggca aacgaggagg
     4441 cgtaaagggt gaactccgtc accgcataag accagttaaa acctggcggc gggattgtca
     4501 ccgcctcgct ggcgtcgcgc aataaggtaa tatgtggatg aaacggacga ttgctttgaa
     4561 aacaaccgct gcgggcagcc tgtgaacgga gcatattcgc cagctggatt aagccgcgtg
     4621 gcggctgacg catccctaac cacaccacac gcgaacgcag ccattgtccg gcgtcatcaa
     4681 gcgtgagtgt gaaaccaggt tgacgaatcc gtccggctaa aagagaaagc gccttctctt
     4741 tctcggcgct cacttcgcct aaaaatgcca gagtcagatg caaattatcg gcggcgaccg
     4801 gacgtcccgc ctcaggtggg aagtgtgtgg cgcgccagtg gataatctgt tcgcggattt
     4861 ctgcaggtaa gtcgatagca aagaacagac gttgcggttc agacatgtga ggcactcggt
     4921 tatgaattac cgcgatgcta caatgtggcg cgaagaatgt taaccctctg gagcgttttg
     4981 tgtcgtcgtt gcccgttgct gccgttttac ctgaattact taccgctctc gattgtgcgc
     5041 cgcaggtatt attaagtgcg ccgaccgggg ccgggaaatc aacctggctg ccgctgcaac
     5101 tgctggcgca tcccggcatt aacgggaaaa ttatcctgct ggagccgcgt cgtctggcgg
     5161 cgcgtaacgt cgcgcaacgg ctggaggagc tgcttaacga aaagccaggc gataccgttg
     5221 gctaccggat gcgtgcgcaa aactgcgtcg ggccgaatac ccgcctggaa gtagttaccg
     5281 aaggcgtgct gacgcggatg atccagcgtg acccggagtt gagcggtgtt ggattggtga
     5341 tccttgatga atttcatgag cgtagcttgc aggcggattt ggcgttggcg ctgttactcg
     5401 atgtgcaaca aggtctgcgt gatgacctta aactgctaat tatgtcggct acgctggaca
     5461 acgaccgctt gcagcaaatg ctgccagaag cgcccgtcgt catctcagaa gggcgctcgt
     5521 ttccggttga acgccgttat ttaccgctgc ccgcgcatca gcgttttgac gatgccgttg
     5581 cggtagccac cgctgaaatg ctgcgtcagg aaagcggatc attactgtta tttttacctg
     5641 gcgtcggaga aattcagcgt gtgcaggaac aactggcttc gcgcatcggc agtgatgtat
     5701 tgctctgccc gctgtatggc gcgttgtcgc tgaacgatca gcgaaaagcg atcctcccgg
     5761 caccgcaagg gatgcgcaaa gtggtgctgg cgaccaatat tgctgaaacc agtttaacca
     5821 tcgaaggtat tcgtctggtg gtggattgtg cccaggagcg tgtggcgcgt tttgatccgc
     5881 gcacggggct aacgcgactg attactcaac gcgttagcca ggcatccatg acgcagcgtg
     5941 ccgggcgcgc cgggcgtctg gagccgggta tctgcctgca tctaatcgcc aaagaacaag
     6001 cagaacgcgc tgccgcgcaa agtgaaccgg aaatcttaca aagcgatctt tccggtttgc
     6061 tgatggaatt actgcaatgg ggatgcagcg atccggcgca gatgagctgg ctggatcaac
     6121 cgccaacggt gaatctactg gccgcgaaac gcctgttaca aatgctgggg gcgctggagg
     6181 gtgaacggct tagtgcgcag gggcaaaaaa tggcagcgct gggtaacgat ccgcgtttag
     6241 cggcaatgct ggttagcgcg aagaacgacg acgaagctgc taccgcggca aaaattgccg
     6301 ccattctcga agagccgcca cggatgggca atagtgacct gggcgtggcg ttttcgcgca
     6361 atcaaccagc ctggcagcaa cgtagtcagc aactgttaaa acgcttaaac gtacgtggcg
     6421 gtgaggcaga cagttcgctt atcgcgccgc tacttgccgg ggcgtttgcc gatcgcattg
     6481 ctcgtcgccg tgggcaagat ggacgctatc aactggcaaa cggcatggga gcgatgctcg
     6541 atgccgacga cgcgctaagc cgccacgaat ggttgatcgc accgttatta ttgcagggca
     6601 gcgcctcgcc ggatgcgcgg attttactgg cgctgccggt cgatattgat gagttagtac
     6661 aacgctgccc gcagctggta cagcagtctg acactgtgga gtgggatgac gcgcaaggta
     6721 cgctgaaagc ctggcgtcgg ctgcaaatcg gtctgctgac ggtgaaagtg cagccgctgg
     6781 cgaaaccctc ggaagacgag ttgcatcagg cgatgcttaa tggcatccgt gataaaggtt
     6841 taagcgtgct caactggacg gcggaagcgg aacagctacg cttgcgtttg ttatgcgccg
     6901 caaagtggtt gccggaatat gactggccag cggttgatga tgaaagttta ttggcgacgc
     6961 tggaaacgtg gctgctgcca catatgactg gcgtacattc actacgcggc ctgaaatcac
     7021 tcgacattta tcaggcacta cgcggattac ttgattgggg aatgcagcaa cgtctggata
     7081 gtgaattgcc tgcgcattac actgtgccga cgggaagccg gatcgccatt cgttatcatg
     7141 aagataaccc gcccgcgctg gcggtgagaa tgcaagagat gtttggcgag gccaccaatc
     7201 cgacgatcgc ccaggggcgc gtgccgctgg tgctggagtt gctttcacct gcccaaagtc
     7261 cattacaaat cacacgagat ttgagcgcct tctggaaagg agcgtaccgt gaggtgcaaa
     7321 aagagatgaa agggcgttat cccaaacatg tctggccgga cgacccggca aatactgcac
     7381 cgacgcgacg gacgaaaaag tattcgtaag gttggttttc tccctctccc tgtgggagag
     7441 ggccggggtg agggcatcag cgcgcacgtt caccctcacc ctaaccctct ccctcaaggg
     7501 agaggggacc gatcgaacac aaattttgag agatatcttc ttctgtcttg taacagaaga
     7561 acagaaaatc gggcttttgc gcctgaatat tgcggagaaa aagcatggcc gggaatgacc
     7621 gcgagccaat tggacgcaaa gggaaaccga cgcgtccggt caaacaaaag gtaagccgtc
     7681 gtcgttacga agatgacgat gattacgacg attatgatga ctatgaggat gaagaaccga
     7741 tgccgcgcaa aggtaagggc aaaggcaaag ggcgtaagcc tcgtggcaaa cgcggctggc
     7801 tatggctact gctaaaactg gctatcgttt ttgccgtgct gatcgccatt tacggcgttt
     7861 atctcgatca aaaaattcgt agccgtattg atggcaaggt ctggcaactg cctgcagcag
     7921 tttatggccg aatggtcaat cttgagccag atatgaccat cagcaagaac gagatggtga
     7981 agctgctgga ggcgactcag tatcgtcagg tgtcgaaaat gacccgtcct ggcgaattta
     8041 ccgtgcaggc caacagcatt gagatgatcc gccgtccgtt tgatttcccg gacagtaaag
     8101 aagggcaggt gcgtgcgcat ctgacctttg atggtgatca tctggcgacc atcgtcaata
     8161 tggagaacaa ccgtcagttc ggctttttcc gtcttgatcc gcgtctgatc accatgatct
     8221 cctcgccaaa cggtgagcaa cgtctgtttg tgccgcgcag tggtttccct gatttgctgg
     8281 tggatacttt gctggcgaca gaagaccgcc atttctacga gcatgatggg atcagcctct
     8341 actcaattgg gcgtgcggtg ctggcaaacc tgaccgcagg tcgcacggtg cagggtgcga
     8401 gtacgctgac gcaacagctg gtgaaaaacc tgttcctctc cagcgagcgc tcttactggc
     8461 gtaaagcgaa cgaagcctac atggcgctga tcatggacgc gcgttacagc aaagaccgta
     8521 ttcttgagct gtatatgaac gaggtgtatc tcggtcagag cggcgacaac gaaatccgcg
     8581 gcttcccgct ggcaagcttg tattactttg gtcgcccggt agaagagcta agcctcgacc
     8641 agcaggcgct gttagtcggt atggtgaaag gggcgtccat ctacaacccg tggcgtaacc
     8701 cgaaactggc gctggagcga cgtaatctgg tgctgcgtct gctgcaacag caacagatta
     8761 ttgatcaaga actctatgac atgttgagtg cccgtccgct gggggttcag ccgcgcggtg
     8821 gggtgatctc tcctcagcca gcctttatgc aactggtgcg tcaggagctg caggcaaaac
     8881 tgggcgataa ggtaaaagat ctctccggcg tgaagatctt cactaccttt gactcggtgg
     8941 cccaggacgc ggcagaaaaa gccgccgtgg aaggcattcc ggcactgaag aaacagcgta
     9001 agttgagcga tcttgaaact gcgattgtgg tcgtcgaccg ctttagtggt gaagttcgtg
     9061 cgatggtggg aggttctgag ccgcagtttg cgggctacaa ccgtgcgatg caggcgcgtc
     9121 gttcgattgg ttcccttgca aaaccagcga cttatctgac ggctttaagc cagccgaaaa
     9181 tctatcgcct gaacacgtgg attgccgatg cgccaatcgc gctgcgtcag ccgaatggcc
     9241 tggtctggtc accgcagaac gatgaccgtc gttatagcga aagcggcaga gtgatgctgg
     9301 tggatgcgtt gacccgttcg atgaacgtgc cgacggtaaa tctggggatg gcgctggggc
     9361 tgcctgcagt tacggatacc tggatcaaac tgggcgtacc gaaagatcag ctgcatccgg
     9421 ttccggcgat gctgctgggg gcgttgaact taacgccaat cgaagtggcg caggcgttcc
     9481 agaccatcgc cagcggtggt aaccgtgcac cgctttctgc actgcgttcg gtaatcgcgg
     9541 aagatggcaa ggtgctgtat cagagcttcc cgcaggcaga acgcgctgtt ccggcgcagg
     9601 cggcgtatct gacactatgg accatgcagc aggtggtaca acgtggtacg ggtcgtcagc
     9661 ttggggcgaa atacccgaac ctgcatctgg cagggaaaac agggactacc aacaataacg
     9721 tagatacttg gtttgcaggc attgacggca gcacggtgac catcacctgg gcaggccgtg
     9781 ataacaacca gccgaccaaa ctgtatggag ccagcggggc aatgtcgatt tatcagcgtt
     9841 atctggctaa ccagacgcca acgccgctga atcttgttcc gccagaagat attgcagata
     9901 tgggcgtgga ctacgacggc aactttgttt gcagcggtgg catgcgtgtc ttgccggtct
     9961 ggaccagcga tccgcaatcg ctgtgccagc agagcgagat gcagcagcag ccgtcaggca
    10021 atccgtttga tcagtcttct cagccgcaac agcaacctgc tcagcaagag cagaaagaca
    10081 gcgacggtgt agccggttgg atcaaggata tgtttggtag taattaacat ctaagcgtga
    10141 aataccggat ggcgagttgc catccggtaa aataacatcc catctaagat attaaccctt
    10201 tcttttcatc tggttgttta ttaacccttc aggaacgctc agattgcgta ccgcttgcga
    10261 acccgccagc gtttcgaata ttatcttatc tttataataa tcattctcgt ttacgttatc
    10321 attcacttta catcagagat ataccaatgg cgcgttccaa aactgctcag ccaaaacact
    10381 cactgcgtaa aatcgcagtt gtagtagcca cagcggttag cggcatgtct gtttatgcac
    10441 aggcagcggt tgaaccgaaa gaagacacta tcaccgttac cgctgcacct gcgccgcaag
    10501 aaagcgcatg ggggcctgct gcaactattg cggcgaagca ctctgctact gcgactaaaa
    10561 cggatacacc aattgaaaaa acgccgcagt ctatttcggt tgtgacaaat gaagagatgc
    10621 agatgcatca atttcagtct gtaaaagaag cattaggtta tacacctggc gttacggtta
    10681 gcagtcgtgg tgcttctaat acatatgatt ttgttatcat tcgtggtttc tcatctgttg
    10741 gtctgaatca aaataattac cttgatggac taaaacttca gggcaacttt tataacgatg
    10801 ctgtgattga tccttacatg ctcgagaggg ttgaactgat gcgtgggccg acgtctgttc
    10861 tctatggaaa aagtaatcct ggtgggatta tttctatggt gagtaagcgt ccgaccactg
    10921 aacccctgaa agaaattcag tttaaaatgg ggacggataa tctgtttcag accggattcg
    10981 atttcagtga tgcactggat gataacggtg agttctctta ccgtttgacg ggcctcgctc
    11041 gctcaacaaa cgaacagcag aaaaactctg aatctcagcg ttataccatt gctccatcat
    11101 tctcatggcg tccagacgac aaaaccaatt ttactttcct gtcctatttc cagaatgaac
    11161 cagaaacggg ttattacggt tggttgccga aagaggggac cgttgagcca ttgcctaatg
    11221 gtaagcgtct accgactgac ttcaatgaag gtgcatcgaa taatacatac tcccgtaacc
    11281 agaaaatggt gggatatagt tttgaacatg gttttaatga caccttcacc gtgcgtcaga
    11341 atctgcgttt cagtgaaatg aaaacctcac agaaaagtgt ttatggcaca gggattgctg
    11401 gtgatggtca taccctaaac cgcgggacag tggtggataa tgagcgtcta caaaacttta
    11461 gcgttgatac ccaacttgaa agtaagtttg ctacaggtga cgtcgagcat actttgctga
    11521 caggggtaga cttcatgcgg atgcgtaatg atatcaatgc cagctttgga tccgcaccat
    11581 ccatcgatct ttataacaaa tatcaccctg aatactttgc atttggtagc gcagagccat
    11641 accagatgaa tgaaagcaaa caaacaggta tttatgttca ggatcaggcg gaatggaata
    11701 aatgggtatt cactctgggg ggacgctacg attggtctaa gcaagcgacc actgttcgtg
    11761 aaaactctta tacgccgact gaaggttata ttgagcgcaa tgatcatcag ttcacctggc
    11821 gcggtggtgt aaattactta ttcgataatg gtatttcacc ttactttagc tatagccagt
    11881 cctttgaacc gagtgctttc gatctgtgga gcaacccacg catttcctat aagccatcga
    11941 aaggtgaaca gtatgaagct ggcgtaaaat atgttccgaa tgatatgccg gtcgttgtta
    12001 cgggcgcagt ctatcaattg acgaaaacaa ataacctgac agcagaccca acaaacccat
    12061 tagcgcaagt cccagcaggt gagattcgcg ctcgtggtgt ggaacttgaa gcaaaagcgg
    12121 cgttaaatgc caatattaac ttgacggctt cttataccta caccgatgcg gaatacacca
    12181 aagacaccaa tctcaaaggt aaaactccag aacaagtacc ggagcatatg gcatctctct
    12241 ggggggatta taccttcaat gaagggccgc tttctggttt aacattggga acaggtggtc
    12301 gttttattgg ttccagctat ggtgatccgg caaacacttt taaagtgggt agcgcagctg
    12361 taatggatgc tgttgtaaaa tatgatctgg cacgctttgg tatggcggga tccagccttg
    12421 ctgtgaacgt caacaatttg ctcgatcgtg agtatgttgc cagttgcttc cagacttatg
    12481 gctgcttctg gggcgcagaa cgtcaggtcg ttgcaaccgc aaccttccgt ttctaatttc
    12541 tcttttgggg cacggatttc cgtgcccatt tcacaagttg gctgttatgc aggaatacac
    12601 gaatcattcc gataccactt ttgcactgcg taatatctcc tttcgtgtgc ccgggcgcac
    12661 gcttttgcat ccgctgtcgt taacctttcc tgccgggaaa gtgaccggtc tgattggtca
    12721 caacggttct agtaaatcca ctctgctcaa aatgcttggc cgtcatcagc ctccgtcaga
    12781 aggggagatt cttcttgatg cccagccgct ggaaagctgg agcagcaaag cgtttgcccg
    12841 caaagtggct tatttgccgc agcagcttcc tccggcagaa gggatgaccg tgcgtgaact
    12901 ggtggcgatt ggtcgttacc cgtggcatgg cgcgctgggg cgctttgggg cggcagatcg
    12961 cgaaaaagtc gaggaagcta tctcgctggt tggcttaaaa ccgctggcgc atcggctggt
    13021 tgatagtctc tctggcggcg aacgtcagcg ggcgtggatc gccatgctgg tggcgcagga
    13081 tagccgttgt ctgttgctcg acgaaccgac ctcggcgctg gatatcgccc accaggttga
    13141 tgtgctggcg ctggtgcacc gtttaagtca ggagcgtggc ctgacggtca ttgccgtgtt
    13201 gcacgatatc aatatggcgg cacgctactg tgattatctg gtcgccctgc gcggtggtga
    13261 aatgattgct cagggaacgc ctgcggaaat tatgcgcggc gataccctcg aaatgattta
    13321 tggcatcccg atgggtattt tgccgcatcc ggcgggtgct gcacctgtga gttttgttta
    13381 ttgatgagcg gcttacctct tatttcgcgc cgtcgactgt taacggcgat ggcgctttct
    13441 ccgttgttat ggcagatgaa taccgcccac gcggcggcta ttgatcccaa tcgtattgtg
    13501 gcgctggagt ggttgccggt ggaattactg ctggcgctcg gcatcgtgcc ttacggcgta
    13561 gcggatacca tcaactatcg cctgtgggtc agcgaaccac cattgccgga ctcagtgatc
    13621 gacgtcggtt tgcgcacaga acctaacctt gaactgctga ccgaaatgaa accgtcgttt
    13681 atggtctggt cggcaggata tggcccttca gcagaaatgc tggcacgtat tgcgccgggg
    13741 cgtggattta acttcagcga cggcaaacag ccgctggcga tggcgcgtaa atcactgacg
    13801 gaaatggcag atttacttaa cctgcaaagc gcagcagaaa cgcatttagc gcaatatgaa
    13861 gactttatcc gcagcatgaa accccgcttt gtgaagcgtg gtgcacgccc gttattgctg
    13921 acgacgctta tcgatccgcg ccatatgttg gtcttcggtc caaacagctt gttccaggaa
    13981 attcttgatg agtacggcat cccaaatgcc tggcaagggg aaaccaactt ctggggcagt
    14041 accgccgtca gtatcgatcg tctggcagcg tataaagacg ttgatgtgct ctgttttgat
    14101 cacgacaaca gcaaagacat ggatgcgcta atggcaaccc cgctgtggca ggccatgccg
    14161 tttgtccgcg ccggacgctt tcagcgcgta cccgcagtct ggttttatgg tgcgacgctc
    14221 tcggcaatgc actttgtgcg cgttctggat aacgccatcg gaggtaaagc gtgagtaaac
    14281 gaattgcgct tttcccggcg ttattgctgg cgctgctggt gattgtcgct acggcgctga
    14341 cctggatgaa cttttcgcag gcgctgccgc gtagccagtg ggcgcaggcc gcctggtcgc
    14401 cggatattga cgtcatcgag cagatgattt ttcactacag cttgctgccg cgtctggcga
    14461 tttcgctgct ggtgggcgca ggcctggggc tggtgggcgt gctgtttcag caagtgctgc
    14521 gtaatccgct ggcggaaccg acgacacttg gcgttgctac aggcgcgcaa ctggggatta
    14581 ccgtcactac gctctgggcg atcccagggg cgatggcgag tcagtttgct gcgctggcgg
    14641 gcgcttgcgt tgttggctta atcgtctttg gcgtcgcgtg ggggaaacgg ctttcgccgg
    14701 taacgctgat cctcgcgggg ctggtagtga gcctttattg tggggcaatc aatcagttac
    14761 tggttatctt ccaccatgac caactgcaaa gcatgttcct gtggagcacc ggaacgctga
    14821 cgcaaaccga ctggggcggt gttgagcgtt tatggccgca gttgctgggc ggtgtgatgc
    14881 tgacgttgct gctacttcgc ccgttaaccc tgatggggct tgatgatggc gtggcgcgca
    14941 atctcgggct ggccttgtcg ctcgcgcgtc tggcggcgct gtcgctggcg attgtcatca
    15001 gtgcgctgct ggtgaacgcg gtggggatta tcggctttat cgggttgttt gcgccgttgc
    15061 tggcaaaaat gctgggggcg cggcgtctgc tgccgcgact gatgctggcg tcgttgattg
    15121 gtgcgctgat cctctggctt tccgatcaaa tcatcctctg gctgactcgc gtgtggatgg
    15181 aagtgtccac cggttcggtc actgcgttga tcggtgcgcc gctgctactg tggctgttgc
    15241 cgcgtttacg cagcattagc gcgccggata tgaaggtcaa cgatcgtgtc gcggctgaac
    15301 gccaacatgt gctggcgttt gccctcgcgg gcggcgtgct gctgttgatg gctgtggtgg
    15361 tggcgctgtc gtttggtcgt gatgcgcacg gctggatgtg ggcgagcggg gcgttgctcg
    15421 atgatttaat gccctggcgc tggccgcgaa ttatggcggc gctatttgcg ggcgtcatgc
    15481 tggcggtggc gggctgtatt attcagcgac tgaccggcaa cccgatggca agcccggaag
    15541 tgctggggat tagctccggc gcagcgtttg gcgtggtact gatgctgttt ctggtaccgg
    15601 gtaatgcttt tggctggctg ttacccgcgg gaagtatcgg tgccgcggtg acgctgttga
    15661 ttattatgat cgccgccggg cgcggtggat tttccccaca ccgcatgtta ctggcgggga
    15721 tggcgttaag taccgcattc accatgcttt taatgatgtt gcaggcgagt ggtgacccgc
    15781 gaatggcgca agtgctcacc tggatctctg gttcgaccta caacgccacc gatgcgcagg
    15841 tctggcgtac cggaattgtg atggtgattt tgctggcgat taccccgctg taccgccgct
    15901 ggctgaccat tttacctctg ggcggtgata ccgcacgagc tgtgggaatg gcgctgacgc
    15961 cgacgcgaat tgcgctgctg ctgttagcgg cttgcctgac ggcgacctcg acgatgacta
    16021 ttggaccgtt gagttttgtt ggtttaatgg caccgcatat tgcgcggatg atgggttttc
    16081 gacggacgat gccacacatc gtaatttcgg cgctggtggg tggtttactg ctggtattcg
    16141 ctgactggtg tgggcggatg gtgctgtttc cattccagat cccggcgggg ctgctgtcga
    16201 cctttatcgg cgcgccatat tttatctatt tgttgagaaa gcagagccgt taattgagtg
    16261 cctcgcccgg tgggcgaggc aaaattatca caacttcgca aatacccgac gtgcagcatc
    16321 gatggtgtta ttgatatctt ccatgctgtg cgccacagac ataaagcccg cttcaaacgc
    16381 tgacggtgcc aggtaaacac cttcgtccag catcatatgg aagaaacgct taaagcgttc
    16441 cacgtcacag gccatcacat cctgatagca cgtcacggac tcggcgtcgg taaagaaaat
    16501 accgaacatg ccgccaacgt ggttaacgac cagcggagtt ccggcttctt ctgccgcttc
    16561 cagcagacct tctgccagac gtgttgtcag ctcatccagc gtttcgtgaa cgcccggctg
    16621 cgcgacttca ttcagacagg cgaaacccgc tgccatcgca atcgggttac cggaaagcgt
    16681 acccgcctga tagaccggac ccgtcggggc cagcgcatcc attacatcac gacgaccacc
    16741 gaatgcgcct accggcattc caccgccgat gattttgccg aggcaggtta aatctggcac
    16801 tacgccgtaa taatcctgtg cgccagccag tgccacgcgg aagccggtca tcacttcatc
    16861 gatgatcagc aacgcgccaa attcgtcgca cagcgcacgc agacctggca ggaactctgg
    16921 ctgcggcgga acacagttca tattgcctgc caccggctcg acgataatac aggcaatctc
    16981 ttgcgggtat tgctcaaacg cggcgcgtac agaagccaga tcgttataag tacaggttaa
    17041 ggtatgtttg gcgaaatctg ccggaacacc cggcgagttt ggctggccta acgtgagtgc
    17101 gccagaaccg gctttcacca gcaggcagtc agcgtgaccg tggtaacaac cttcaaattt
    17161 aatgattttg tcgcgaccgg taaaaccacg ggccaggcgg atggcgctca tggtcgcttc
    17221 agtgccggag ttcaccatgc gcaccatatc catggtcggg accagttcgg tcaccagttg
    17281 cgccattttc acttccattt cggtcggtgc accaaagctt aaaccacgct cggcggcttc
    17341 aatcacggca ttgcggatag ccggatggtt atggcccagc accatcggcc cccaggaacc
    17401 gacataatcg atataggctt tgccatcaac atcgtacaga taagcgccgt ccgctttttc
    17461 gataaacagt ggagtgccgc ccacgccagt aaaggcgcga acaggggagt tcacaccgcc
    17521 agggagcagc tcgcgcgctg cgctgtaaag attttcagac ttactcatgg agggttcctg
    17581 attcgtagaa aaagtgaatg gctgctattc tatgttattc ataacaagtt aaatactcgt
    17641 caaacatcag gctgcttgta ctggtgcaat cctgatttct tagagtataa aagttttgtg
    17701 catttgaaac attacgcttt gcaaaggatt ttcatggaac gtgcgagtaa aatgccgtca
    17761 tcttatttgt atgaccaata agtgatcatt ggatgaaaac tgatactccc tctttagaaa
    17821 caccgcaggc cgcgcgcctg cgacgcagac aactgattcg ccaacttctt gagcgcgata
    17881 aaaccccgtt agccattttg tttatggcgg cagtcgtcgg cacgcttgtc gggctggcag
    17941 cggttgcttt tgacaaaggt gtcgcctggt tgcagaacca acgtatggag gcgctggtac
    18001 atactgctga taattatccg cttctgttaa ccgtcgcttt tctctgttcg gcggtgctgg
    18061 cgatgttcgg ctactttttg gtgcgcaaat acgcgccgga agcaggtggt tcggggatcc
    18121 cggaaattga aggggcgctg gaagatcaac gtcccgttcg ctggtggcgt gtgttgccgg
    18181 tgaaattctt tggcgggctg gggacactcg gcggaggcat ggtgctgggg cgcgaagggc
    18241 caaccgtgca gatcggcggc aatatcggtc gcatggtact cgatattttc cgcctgaaag
    18301 gtgatgaagc tcgccatacg ctgctggcaa ccggtgctgc tgcggggctg gctgcggcct
    18361 ttaacgcgcc gctggcgggt attttgttta ttatcgaaga gatgcgtccg cagtttcgct
    18421 atacgttaat ttcgattaaa gcggtattta ttggcgtcat tatgtcgacc attatgtacc
    18481 ggatttttaa tcatgaagtt gcgttgattg acgtcggtaa actttctgat gcgccgctta
    18541 atacgctgtg gctttatctg atcctcggta ttatttttgg cattttcggc cctattttta
    18601 ataaatgggt gctggggatg caggatttgc tgcaccgtgt gcacggcggc aatattacca
    18661 aatgggtgct aatgggcggt gcgattggcg gtctgtgtgg attgctgggg tttgtggcac
    18721 cagcaacgtc gggcggcggt tttaacctga ttcctatcgc taccgcaggg aatttcagca
    18781 tgggaatgct ggtgtttatc ttcgtcgcgc gggtcattac caccttactg tgcttctctt
    18841 ccggcgcgcc gggcggtatt tttgccccga tgctggcgct gggtactgtg ctgggaaccg
    18901 ctttcggaat ggttgtcgtt gagctgtttc cgcaatatca ccttgaggcg gggacttttg
    18961 ctattgccgg aatgggggcg ttactggcgg catctattcg cgcgccgtta acggggatca
    19021 ttttggttct ggagatgacc gataactacc agctcatttt gccaatgatt attaccggtc
    19081 ttggcgcaac actattagcg caatttaccg gcgggaaacc gctatattcg gagattcttg
    19141 cgcgcacgct ggcaaaacag gaagctgagc aactggcgcg aagcaaggcc gcatcagcca
    19201 gcgagaatac ttgaacgaaa taccagggta ttagataatg gcgattatta ttgggttaga
    19261 atttgcccaa ttgccgatgt cgtttggagc aaaatatgag tgatgacgta gcactgccgc
    19321 tggagtttac cgacgcagca gccaacaaag ttaaaagcct gatcgctgac gaagataacc
    19381 cgaatctgaa attacgcgtg tatatcaccg gtggcggttg cagcggcttc cagtatggtt
    19441 tcacctttga tgatcaggtg aacgaaggcg atatgaccat cgaaaaacag ggcgttggcc
    19501 tggtggttga tccgatgagc ctgcaatatc tggtcggtgg ttccgttgac tataccgaag
    19561 gactggaagg ttctcgtttc atcgtgacca acccgaacgc gaaaagcacc tgcggttgcg
    19621 gttcttcctt tagcatctaa tctgttgttc atgtgccgga taaactatcc ggcacatctt
    19681 ctctcttcaa cgcccattct catccagcgc aaacgtcggt agcttaagat gccaacgaat
    19741 agccgccagc cgaatcaata gcgtcacgac catgcccatc atactggctg tttccagtgg
    19801 tacggaaaat gtgtaataag ccgtagcgtg gacaataccg ccgataatac aggcagttgc
    19861 gtagatttct gtacgtaaaa tcatggggat ttcgcgggcc agtacatcac gaatgatccc
    19921 gccgccaacg ccagtaatga cgcccataca aaccgcgatt aacggaccgg cttccgcatt
    19981 aaaggcttta ttcacgccaa tgccgacaaa caccgccaga ccaacggcgt ccagcaccgg
    20041 caacatccat tttggtaagc gtcttggctg gcgcaccagc acgatggtca gcatgctggt
    20101 taccattgca acgaccagat cggtgggatc tttcacccaa aataccgggc cgtgatccag
    20161 cgccatgtcg cgaattgtcc cgccgcctac agcggtaacc acgcccagta ccagaacacc
    20221 aaaagggtcc atacgcaatt ttccggctaa caaaacgccg gagatggcaa ataccgctgt
    20281 gccgactata tccagccaat agacgagcat tgttcaatcc ccactgagca cctaaaaagg
    20341 tcaggcgcta atctacctgt gaaagcgcat tacagagctg ttgtgcagcg aggataatac
    20401 gtgggcttgc acgtcaaacc agtcactcgt gagaggaata acgggaattt tgagctgttc
    20461 accccagtat tgtttgattt taggaatttg gtccggtccg cctgtaatga caatcgcctg
    20521 tggcgagcgt gctaacacct gttcgcggct aacttgcggc caaggaaccc ggctgtcttt
    20581 aaagatgttt tctccgccac aaacttcgag tacctggttt tgaatcgact cttttccact
    20641 ggtaaatggc ggattaatgc cgaattgcag aaaaacacgt tttttaggtt tatcagcata
    20701 ttgcgctttc aattgcgcgt actgatccag cagggattgc gcggcttgtt cggccttatc
    20761 cggttgcgga ctccaggggg ccagttgacg taacgcattg gcaatttgtt caatgcttgt
    20821 cgcatcgacc cacatcactt ttattcccgg cgaagccagc tggtcaacct gccgctcggc
    20881 attacctcca cgccaggcaa tcaccagatc gggtttcagc gcgacaatgc gttccagatt
    20941 catcccctgc caggtggaaa cctgctcaat cttttgcgct tgtggaggat agtcggaata
    21001 gctgctgacc ccaaccggcg tgatcccggc ggcaaaggca agttcagtgt tggcgggaga
    21061 aagcgtgatg acgcgcggtg ccgcgttgag ccacagtggc gcgagaaaag acagggcgac
    21121 cagcgccctg aacagtgact tagccatgtg ccagtttctg caccagtgac tcaaccatca
    21181 ggctggactg tttagcggca acagccagga actcatcgaa gctaagatga gactgttgat
    21241 cggccacgtc ggagatggcg cgtacgacaa caaacgggac gttgaaattg tggcagacat
    21301 gggcgattgc cgtcgcttcc atctctacag caatggcctg tgggaagttg tggcggattt
    21361 tcgccagacc aacagaaccg ttgatgaaag cgtcgccgct aacaatcagg ccacgtacag
    21421 cgttaagatt cagttcggca atgcaggcct cagcggcagc gatcagttta tcgtcagctt
    21481 taaagcctgc cggacagcct ggtaactgac cgtattcata accaaatgcc gtgacatccg
    21541 cgtcgtgata acgtgcttcg tccgagacaa cgatatcgcc cactttcaac gttggtgcca
    21601 ggccaccggc agaaccggtg ttaataatca catctggctt gccgtgttcc aacagcaaag
    21661 tggcacccag cgccgcagcg actttaccga tgcccgattt cagaagcgca acctcggttc
    21721 cattcagttg gccggtatag atttcgcaac cgccgagact gatagtttga cgattttcga
    21781 ttttgtcacg cagcagcgta acttcttctt ccattgcacc aatgatgccg attttcatag
    21841 atttactcgc gataagcccg atttgaaggc atagtttacc atgcgcttac ggggaagcgt
    21901 atttctcacg cgggagagga catggcacag attgatttcc gaaaaaaaat aaactggcat
    21961 cgtcgttacc gttcaccgca gggcgttaaa accgaacatg agatcctgcg gatcttcgag
    22021 agcgatcgcg ggcgtatcat caactctccg gcaattcgtc gtctgcaaca aaagacccag
    22081 gtttttccac tggagcgcaa tgccgccgtg cgcacgcgtc ttacccactc gatggaagtc
    22141 cagcaggtgg ggcgctacat cgccaaagaa attctaagcc gtatgaaaga gcttaaatta
    22201 ctggaagcat acggcctgga tgaactgacc ggcccctttg aaagcattgt tgagatgtca
    22261 tgcctgatgc acgatatcgg caatccgccg tttggtcatt ttggcgaagc ggcgataaat
    22321 gattggtttc gccagcgttt gcacccggaa gatgccgaaa gccagcctct gactgacgat
    22381 cgctgcagcg tggcggcact acgtttacgg gacggggaag aaccgcttaa cgagctgcgg
    22441 cgcaagattc gtcaggactt atgtcatttt gaggggaatg cacaaggcat tcgtctggtg
    22501 catacattga tgaggatgaa tctcacctgg gcacaggttg gcggtatttt aaaatatacc
    22561 cgtccggcgt ggtggcgtgg cgaaacgcct gagacacatc actatttaat gaaaaagccg
    22621 ggttattatc tttctgaaga agcctatatt gcccggttgc gtaaagaact taatttggcg
    22681 ctttacagtc gttttccatt aacgtggatt atggaagcag ccgacgacat ctcctattgt
    22741 gtggcagacc ttgaagatgc ggtagagaaa agaatattta ccgttgagca gctttatcat
    22801 catttgcacg aagcgtgggg ccagcatgag aaaggttcgc tcttttcgct ggtggttgaa
    22861 aatgcctggg aaaaatcacg ctcaaatagt ttaagccgca gtacggaaga tcagtttttt
    22921 atgtatttac gggtaaacac cctaaataaa ctggtaccct atgcggcaca acgatttatt
    22981 gataatctgc ctgcgatttt cgccggaacg tttaatcatg cattattgga agatgccagc
    23041 gaatgcagcg atcttcttaa gctatataaa aatgtcgctg taaaacatgt gtttagccat
    23101 ccagatgtcg agcagcttga attgcagggc tatcgggtca ttagcggatt attagagatt
    23161 tatcgtcctt tattaagcct gtcgttatcc gactttactg aactggtaga aaaagaacgg
    23221 gtgaaacgtt tccctattga atcgcgctta ttccacaaac tctcgacgcg ccatcggctg
    23281 gcctatgtcg aggctgtcag taaattaccg tcagattctc ctgagtttcc gctatgggaa
    23341 tattattacc gttgccgcct gctgcaggat tatatcagcg gtatgaccga cctctatgcg
    23401 tgggatgaat accgacgtct gatggccgta gaacaataac caggcttttg taaagacgaa
    23461 caataaattt ttaccttttg cagaaacttt agttcggaac ttcgcgctat aaaacgaatc
    23521 tgaagaacac agaaattttg cgttatctgt taatcgagac tgaaatacat gaaaaaaacc
    23581 acattagcac tgagtgcact ggctctgagt ttaggtttgg cgttatctcc gctctctgca
    23641 acggcggctg agacttcttc agcaacgaca gcccagcaga tgccaagcct tgcaccgatg
    23701 ctcgaaaagg tgatgccttc agtggtcagc attaacgtag aaggtagcac aaccgttaat
    23761 acgccgcgta tgccgcgtaa tttccagcag ttcttcggtg atgattctcc gttctgccag
    23821 gaaggttctc cgttccagag ctctccgttc tgccagggtg gccagggcgg taatggtggc
    23881 ggccagcaac agaaattcat ggcgctgggt tccggcgtca tcattgatgc cgataaaggc
    23941 tatgtcgtca ccaacaacca cgttgttgat aacgcgacgg tgattaaagt ccagctgagc
    24001 gatggccgta agttcgacgc gaagatggtc ggcaaagatc cgcgctctga tatcgcgctg
    24061 atccaaatcc agaacccgaa aaacctgacc gcaattaaga tggcggattc tgatgcactg
    24121 cgcgtgggtg attacaccgt agcgattggt aacccgtttg gtctgggcga gacggtaact
    24181 tccgggattg tctctgcgct ggggcgtagc ggcctgaatg ctgaaaacta cgaaaacttc
    24241 atccagaccg atgcagcgat caaccgtggt aactccggtg gtgcgctggt taacctgaac
    24301 ggcgaactga tcggtatcaa caccgcgatc ctcgcaccgg acggcggcaa catcggtatc
    24361 ggttttgcaa tcccgagcaa catggtgaaa aacctgacct cgcagatggt ggaatacggc
    24421 caggtgaaac gcggtgagct gggtattatg gggactgagc tgaactccga actggcgaaa
    24481 gcgatgaaag ttgacgccca gcgcggtgct ttcgtaagcc aggttctgcc taattcctcc
    24541 gctgcaaaag cgggcattaa agcgggtgat gtgatcacct cactgaacgg taagccgatc
    24601 agcagctttg ccgcactgcg tgctcaggtg ggtactatgc cggtgggcag caaactgacc
    24661 ctgggcttac tgcgcgacgg taagcaggtt aacgtgaacc tggaactgca gcagagcagc
    24721 cagaatcagg ttgattccag ctccatcttc aacggcattg aaggcgctga gatgagcaac
    24781 aaaggcaaag atcagggcgt ggtagtgaac aacgtgaaaa cgggcactcc ggctgcgcag
    24841 atcggcctga agaaaggtga tgtgattatt ggcgcgaacc agcaggcagt gaaaaacatc
    24901 gctgaactgc gtaaagttct cgacagcaaa ccgtctgtgc tggcactgaa cattcagcgc
    24961 ggcgacagca ccatctacct gttaatgcag taatctcact caaccccttc ctgaaaacgg
    25021 gaaggggttc tccttacaat ctgtgaactt caccacaact ccatacatct tcatcatcct
    25081 ttaggcattt gcacaatgcc gtacgttacg tacttcctta tgctaagccg tgcataacgg
    25141 aggacttatg gctggctggc atcttgatac caaaatggcg caggatatcg tggcacgtac
    25201 catgcgcatc atcgatacca atatcaacgt aatggatgcc cgtgggcgaa ttatcggcag
    25261 cggcgatcgt gagcgtattg gtgaattgca cgaaggtgca ttgctggtac tttcacaggg
    25321 acgagtcgtc gatatcgatg acgcggtggc acgtcatctg cacggtgtgc ggcaagggat
    25381 taatctaccg ttacggctgg aaggtgaaat tgtcggcgta attggcctga caggtgaacc
    25441 agagaatctg cgtaaatatg gcgaactggt ctgcatgacg gctgaaatga tgctggaaca
    25501 gtcgcggttg atgcacttgt tggcgcagga tagccgtttg cgggaggaac tggtgatgaa
    25561 cctgattcag gcagaggaga atactcccgc acttactgaa tgggcgcaac ggctggggat
    25621 cgatctcaat caaccgcgag tggtggctat tgttgaggtc gacagcggtc agcttggtgt
    25681 ggacagcgca atggcggagt tacaacaact gcaaaacgcg ctgactacgc ccgagcgtaa
    25741 taatctggtg gcgattgtct cgctaaccga aatggtggtg ttgaaaccgg cgttgaactc
    25801 ttttgggcgc tgggatgcag aagatcatcg taagcgagtt gaacaactga ttacccgcat
    25861 gaaagagtac ggccggctgc gttttcgcgt ttcactgggc aactatttta ccggtcctgg
    25921 cagtattgcc cgatcctatc gtacggcgaa aacgacgatg gtggtgggta aacagcggat
    25981 gccagaaagt cgctgctatt tttatcagga tctgatgtta cctgtgttac tcgacagttt
    26041 gcgtggcgac tggcaggcca acgaactggc gcgaccgctg gcgcggctga aagcgatgga
    26101 caataacggc ttgctgcgac gaacgctggc ggcgtggttt cgtcacaatg tgcaaccgct
    26161 ggcaacgtca aaggcgttgt ttatttatcg taataccctg gagtatcggc ttaatcgtat
    26221 atcggaactg accgggcttg atttgggcaa ttttgatgac aggttgctgc tgtatgtggc
    26281 gttacaactg gatgaagagc ggtaggttat gcgttaaggt tgaggcggcg ctgtctcatt
    26341 tccctcagcc cgaaggggag aggggaatgc ccgaattaac cgtcaattcg ggattattta
    26401 cgcgttagtt tttccagatc ggcttcaatc tcgctgatct tattggttac gactgactcc
    26461 aggtgacgta agtcgtcgag gatcttacgc ttaagatcaa cttcgctgcg gtcacgctgg
    26521 cagatttgat caagctcatc aatgatatac cgtagattcg ggctgatttc ctggacttct
    26581 ttataaccct gacccacacc atcagcgacg accgttttac gctgacgcgg atatttaaac
    26641 ttaacgctct tggcgaaaaa ctcgcctttg tctttctgga aatagatttt cagaatatcg
    26701 ttgttggctt cctgccggag gctgtaacga tcaatttctt caggattggt aatacccaga
    26761 cttttcagat tgtcgtacat agcgttacct caaaatgagt cagtaaattg tgcttatttt
    26821 agcatttggc ctagcccgcc cggctcgact gtgatcgcag aaagcctttt tcttccagac
    26881 ttctatcatg gcgtaaaaat caaaaaatta cctgctttat tgtggtgata aaattcacgt
    26941 tctacaccag ttccagcatc gttacttccg ggcggcagtt cagacgcaaa ccatacaaac
    27001 tgcccacgcc acgggttgtg tagatgtgtc gttcgccaaa ggcatttaat ccggcgacgt
    27061 aacgtttatc ttcgacaggg gcaaaaggtt ctccaaccaa cggtacgcgc agttgcccgc
    27121 cgtgagtatg gccgcacagc atcagatccc agggttcatc acgcatgact tctttgctgt
    27181 cgggattatg tgccagcatc agtcttggca gatttgcttc gctggcggga ggtggtttgc
    27241 attgtccggc ccataagtca ccggtgccta ccagttcgaa ttgcctgttc ggcgtggcga
    27301 tcaccgtagc ctggttaaac aacaccgtga tgcccactga tttcaacgtc tcgccaatta
    27361 agtgattttt ttctgtacca acagggcgat cgtggttgcc gaagcaggca aacgtcggcg
    27421 cacattcggc aaggggggag aggacatcac taaacgccga aaaattcagc ggcatatcaa
    27481 ataatacgta atcgccgccc agtaatatca aatcgggctt ttgttctatg ccaagagcaa
    27541 tcgcgtcaga aatcaggctt aaaggaacaa aacgagagta atggagatcg gccagaaaaa
    27601 gaattttgaa tggtgctgcg ttgtctttaa aaaaggcgag gcggtgacgg attaattcaa
    27661 accagcctgg ctcccagtaa tgcatataac cgaaacctga gctcgtggct atcgtcgcgg
    27721 cagtagcctg caacaatcgg cggcgtgaaa tcatcgctca tccctgcaaa aaaaatcggg
    27781 cagcgtcgtg ctgcccgtgt gcatactttt agtcgatggt acgcagcagt tcgttaatgc
    27841 cgactttgcc gcgagttttc gcgtcaactt tcttaacgat aaccgcacag tagaggctgt
    27901 atttgccatc ttttgacggc agattacctg aaacaaccac agaccccgcc ggaacgtgac
    27961 cgtagtggat ttcgccggtt tcacggtcgt aaatacgggt gctctgacca atgtatacgc
    28021 ccatggaaat gacggaacct tcttcgacaa tcaccccttc aactacttca gagcgtgcgc
    28081 caatgaagca gttatcttca atgatggttg ggttagcctg cagcggttcc agcacgccgc
    28141 cgatgcccac gccaccggaa aggtggacgt ttttaccaat ctgcgcacaa gaaccgacgg
    28201 tcgcccaggt atcaaccatg gtgccttcat caacatatgc gccgatgttg acgtaagacg
    28261 gcatcagcac ggtgttacgg gcaataaacg caccctgacg taccgccgct ggtggcacaa
    28321 cgcggaagcc ttctttctgg aaacgtgctt cgtcgtagtc ggcgaatttc attggcactt
    28381 tgtcgaagta gcggctttct gccccttcga tcacctgatt atcattaata cggaaagaga
    28441 gcagcaccgc ttttttcaac cactgatgcg tcacccactg accgtcaatt ttttccgcta
    28501 cacgcagtgc accggaatcc agcagggcga tcacctgatt taccgcttcg cgggtaacgg
    28561 tgtctgcgtt ggttggcgtg atctcggcac ggcgttcaaa agcggtttca ataatgttct
    28621 gtaactgctg cattgttaaa ctcttttcat atcagtaaac acatcaccct ttatcgtttg
    28681 gattgagggc ctctgtcaac cgctgatgca cttcctgctg caactcgtta ttaagcgcac
    28741 gccggtcagc ggtggcaatt atgaataaat cttctactcg ctcgccaatg gttgtaattc
    28801 gggcaccatg aagcgaaatt cccagatcgg caaaaatttt cccgactctc gccagcagtc
    28861 ctggctggtc gagcgcgata agctcaagga acgatttgcg gtcggtatgg gtcggcaaaa
    28921 acgttacttc ggtttcaaca gtaaaatggc gtaatttggc gggttggcga cggggctgcg
    28981 gtggctgcca gctactttgc gtcagtactt gctccagacc aaaccgaata acctcatgac
    29041 gatctgcgga cagcgggctg ccatcgggtt ccagcacgat aaaggtatcc atcgccatac
    29101 cgtcgcgagt ggtgaaaatt tgtgcgtcgt gaacacttaa attgcggcgg tctaattcgg
    29161 cacagacggc ggcaaacaga taggggcggt ccgggctcca gataaaaatc tcggtgcctc
    29221 cacgcgtagc ctgcgggcta agcaatacca gtggtttgct taaatcatgc tgtaataaat
    29281 ggcgggcatg ccaggccagt tgatttgggc tatggcggac aaaatagtta gcacgacagc
    29341 gtgaccaaat ttggtgcagc gcctcttcgt cgatgttatc catgcgcagt agtgccagtg
    29401 cctggagttg gtgatggcga acccgttcgc gcatatccgg cgtgttttgc attccgcgtc
    29461 gtagctgctt ttcggtggca aaatagagtt cgcgcaacag actttgcttc cagctattcc
    29521 acagcgtttc gttggtggcg caaatgtcag ccactgtcag gcataccaga tagcgcagac
    29581 gattttccgt ttgaacttct tcggcaaact gcttgatgac ttcagggtcc tgaatatcgc
    29641 ggcgttgtgc tgtcaccgac atcagcaagt gctggcgaac cagccaggca accagctgtg
    29701 tttcgcgtga gttcagcccg tggagttctg caaaatgcac tacatcctga gcaccgagaa
    29761 tggagtggtc gccgccgcgt cctttggcga tatcgtgaaa cagcgcggcg atgaaaatca
    29821 gctcagttga cggcaggcgc ggccagacgt ccacacacaa cggatggcgc tggcgcgttt
    29881 cttcactggc aaaactctcc agtttcagca tcacgcggat agtatgttca tccaccgtgt
    29941 aggcgtggaa cagatcaaac tgcatctgcc cgacgatatg cgaccattgc ggcatatacg
    30001 cgccgagcac gctatggcga tgcattggca atagcccgcg ccgcaccgct ccggggtgac
    30061 gcagaatgct caaaaacagt tttcgtgctt ccggaatatt acacagcggt tgttgcagat
    30121 ggcgacgggc atggcgtaac tggcgcagcg tggtggagta aatgccggtg atcgcactgt
    30181 tgcgcaccat ggtgtagaac atacgcaaga tggcttccgg ctggcgcata aatagtgttt
    30241 catcacgcag gtcgattagc gtaccgcgta gctgaaactc atcgtcgatt ggacgtggtt
    30301 tttcgtcggc aggaagggcg aggatggctt catcgaacag ttgcagcagc atctggttga
    30361 gttcactgac gcggcgtgta acgcggaagt aatccttcat catccgctcg accggttcgt
    30421 tgccttcacc actgtaattc agacgctgag cgacgctaag ttggcgatcg aataacaggc
    30481 gattatcgta acggctgacg accagatgca gggcaaagcg aatacgccac agtatatgca
    30541 gacattcgtt taattccgcc cgctccgctg aggttaagaa gccaaaccca accatttcat
    30601 ccagcgatgt tgcgccaaaa tgacggcggg ccacccattg cagagtgtgg atatcgcgca
    30661 agccgccagg gctacttttg atgtctggtt caagattgta gctggtgccg tggtaacgct
    30721 gatggcgctg gttctgttct tcaactttcg ccgcgtagaa cttgtcggaa ggccagaatc
    30781 cttcgctaaa aatatgtttt tgcagttcga ggaagagcgc aacatcgcca attaataagc
    30841 gggattcgat taaattggtg gcgacggtta aatccgataa cccttccagc atgcactctt
    30901 caagcgtgcg cacactatga ccgacttcca gctttacatc ccagagcagc gttaacagct
    30961 cgcccacttt ttgcgcctga tcgtccggga gctttttacg gcttaaaatc agtaaatcga
    31021 tgtcagaaag tggatgcagc tcgccacgac cgtagccacc gacggcgacc aatgccaggt
    31081 cggcaatctg gctgaatccc gcttcaatcc ataatcgttg caggagctgg tcgataaact
    31141 cggtgcgcgc ctcaatcaac tgttctgcag agatcccatt gtcaaaggca tcacccagcc
    31201 aacgctggaa agtatcgata tgggctttta tcccaccgac ggttaattca tcacggggcc
    31261 agacgcatgg attttgcggt tgaccgggca gggtggggag agcggtgttt gcgtactgtt
    31321 ctggaagggt attcattgtg cgccactcat aagattaaat tatcgcatta aaaaagccgg
    31381 cattcgccgg cttcatctta ttcgtcgtgc gagattatcg ccgggatggt gtcatccttg
    31441 cgtagcgtca gaatttcgca gccgttatca gtcaccacaa tagtatgctc atattgtgca
    31501 gacaagctgc gatctttggt ttttaccgtc cagccatctt tcatggtgcg gatctctttt
    31561 ttacccgcgt tgaccattgg ctcgatggtg aacgtcatcc caggtttcag tacgacgttg
    31621 gtttcacggg agtcatagtg cagcacctgc ggttcttcat ggaagccgcg accaataccg
    31681 tgtccgcaat attcacgaac gacggagaag ccttctgctt cgacaaactt ctgaatcgcc
    31741 gcaccgattt cgcgcaggtt aatgcctggt ttgaccatgc gcagcgccag gtacaggctt
    31801 tcttgcgtga tgcggcacag acgttcgccc atgatggtcg gcttaccgac gataaacatt
    31861 ttcgaggtat cgccgtggaa accatctttg attacggtga catcaatgtt aacgatatcg
    31921 ccatctttca gcagcttcgc atcgtccggg ataccgtggc acaccacttc attaatagag
    31981 atgcaaacgg atttcggata gccgtgatag ccgaggcagg cagaaaccgc gtgttgttca
    32041 ttaacaatgt aatcattaca gatgcgatcc agctcgccgg tgctgacgcc cggtttaaca
    32101 tacggttcga tcatctccag cacttcggca gccagtcggc cagcgacgcg cattttttcg
    32161 atatcttctg gggtcttgat tgagatagcc attaattctg tccatcagcg tcggtgatac
    32221 cgacaatata tatgtaagtg ccgtcaatgg tatcacaccc gggcaaattg agaatcattc
    32281 tgaatttcgc caaacgtgcc actgaacgtt ttctataata gaaaattcaa cgtctgatgc
    32341 tgtacacagc gccaacaatt attggtgtcc atgacgtatt tgtggtataa agcgcgccgg
    32401 acttccgatc catttcgtat acacagactg gacggaagcg acaatctcac tttgtgtaac
    32461 aacacacacg tatcggcaca tattccgggg tgccctttgg ggtcggtaat atgggatacg
    32521 tggaggcata accccaactt ttatatagag gttttaatca tggcaactgt ttccatgcgc
    32581 gacatgctca aggctggtgt tcacttcggt caccagaccc gttactggaa cccgaaaatg
    32641 aagccgttca tcttcggtgc gcgtaacaaa gttcacatca tcaaccttga gaaaactgta
    32701 ccgatgttca acgaagctct ggctgaactg aacaagattg cttctcgcaa aggtaaaatc
    32761 cttttcgttg gtactaaacg cgctgcaagc gaagcggtga aagacgctgc tctgagctgc
    32821 gaccagttct tcgtgaacca tcgctggctg ggcggtatgc tgactaactg gaaaaccgtt
    32881 cgtcagtcca tcaaacgtct gaaagacctg gaaactcagt ctcaggacgg tactttcgaa
    32941 aagctgacca agaaagaagc gctgatgcgc actcgtgagc tggagaaact ggaaaacagc
    33001 ctgggcggta tcaaagacat gggcggtctg ccggacgctc tgtttgtaat cgatgctgac
    33061 cacgaacaca ttgctatcaa agaagcaaac aacctgggta ttccggtatt tgctatcgtt
    33121 gataccaact ctgatccgga cggtgttgac ttcgttatcc cgggtaacga cgacgcaatc
    33181 cgtgctgtga ccctgtacct gggcgctgta gctgcaaccg tacgtgaagg ccgttctcag
    33241 gatctggctt cccaggcgga agaaagcttc gtagaagctg agtaataagg cttgataact
    33301 cccccaaaat agttcgagtt gcagaaaggc ggcaagctcg agaattcccg ggagcttaca
    33361 tcagtaagtg accgggatga gcgagcgaag ataacgcatc tgcggcgcga aatatgaagg
    33421 gggagagccc ttatagacca ggtagtacac gtttggttag ggggcctgca tatggccccc
    33481 tttttcactt ttatatctgt gcggtttaat gccgggcaga tcacatctcc gaggatttta
    33541 gaatggctga aattaccgca tccctggtaa aagagctgcg tgagcgtact ggcgcaggca
    33601 tgatggattg caaaaaagca ctgactgaag ctaacggcga catcgagctg gcaatcgaaa
    33661 acatgcgtaa gtccggtgct attaaagcag cgaaaaaagc aggcaacgtt gctgctgacg
    33721 gcgtgatcaa aaccaaaatc gacggcaact acggcatcat tctggaagtt aactgccaga
    33781 ctgacttcgt tgcaaaagac gctggtttcc aggcgttcgc agacaaagtt ctggacgcag
    33841 ctgttgctgg caaaatcact gacgttgaag ttctgaaagc acagttcgaa gaagaacgtg
    33901 ttgcgctggt agcgaaaatt ggtgaaaaca tcaacattcg ccgcgttgct gcgctggaag
    33961 gcgacgttct gggttcttat cagcacggtg cgcgtatcgg cgttctggtt gctgctaaag
    34021 gcgctgacga agagctggtt aaacacatcg ctatgcacgt tgctgcaagc aagccagaat
    34081 tcatcaaacc agaagacgta tccgctgaag tggtagaaaa agaataccag gtacagctgg
    34141 atatagcgat gcagtctggt aagccgaaag aaatcgcaga gaaaatggtt gaaggccgca
    34201 tgaagaaatt caccggcgaa gtttctctga ccggtcagcc gttcgttatg gaaccaagca
    34261 aaactgttgg tcagctgctg aaagagcata acgctgaagt gactggcttc atccgcttcg
    34321 aagtgggtga aggcatcgag aaagttgaga ctgactttgc agcagaagtt gctgcgatgt
    34381 ccaagcagtc ttaattatca aaaaggagcc gcctgagggc ggcttctttt tgtgcccatc
    34441 ttgtaaattc agctaaccct tgtggggctg cgctgaaaag cgacgtacaa tgtcgctagt
    34501 attaattcat ttcaatcgtt gacagtctca ggaaagaaac atggctacca atgcaaaacc
    34561 cgtctataaa cgcattctgc ttaagttgag tggcgaagct ctgcagggca ctgaaggctt
    34621 cggtattgat gcaagcatac tggatcgtat ggctcaggaa atcaaagaac tggttgaact
    34681 gggtattcag gttggtgtgg tgattggtgg gggtaacctg ttccgtggcg ctggtctggc
    34741 gaaagcgggt atgaaccgcg ttgtgggcga ccacatgggg atgctggcga ccgtaatgaa
    34801 cggcctggca atgcgtgatg cactgcaccg cgcctatgtg aacgctcgtc tgatgtccgc
    34861 tattccattg aatggcgtgt gcgacagcta cagctgggca gaagctatca gcctgttgcg
    34921 caacaaccgt gtggtgatcc tctccgccgg tacaggtaac ccgttcttta ccaccgactc
    34981 agcagcttgc ctgcgtggta tcgaaattga agccgatgtg gtgctgaaag caaccaaagt
    35041 tgacggcgtg tttaccgctg atccggcgaa agatccaacc gcaaccatgt acgagcaact
    35101 gacttacagc gaagtgctgg aaaaagagct gaaagtcatg gacctggcgg ccttcacgct
    35161 ggctcgtgac cataaattac cgattcgtgt tttcaatatg aacaaaccgg gtgcgctgcg
    35221 ccgtgtggta atgggtgaaa aagaagggac tttaatcacg gaataattcc cgtgatggat
    35281 aaataagggt aagattccgc gtaagtatcg cgggggcgta agtctggtta taaggcgtta
    35341 ttgttgcagg cagtttggtc acggccagcg cgcagcaacc ggagcgtaca aaagtacgtg
    35401 aggatggcga gcactgctcg gggccaaaat ggcaaataaa atagcctaat aatccagacg
    35461 attacccgta atatgtttaa tcagggctat acttagcaca cttccactgt gtgtgactgt
    35521 ctggtctgac tgagacaagt tttcaaggat tcgtaacgtg attagcgata tcagaaaaga
    35581 tgctgaagta cgcatggaca aatgcgtaga agcgttcaaa acccaaatca gcaaaatacg
    35641 cacgggtcgt gcttctccca gcctgctgga tggcattgtc gtagaatatt acggcacgcc
    35701 gacgccgctg cgtcagctgg caagcgtaac ggtagaagat tcccgtactc tgaaaatcaa
    35761 cgtgtttgat cgttcaatgt ctccggccgt tgaaaaagcg attatggcgt ccgatcttgg
    35821 cctgaacccg aactctgcgg gtagcgacat ccgtgttccg ctgccgccgc tgacggaaga
    35881 acgtcgtaaa gatctgacca aaatcgttcg tggtgaagca gaacaagcgc gtgttgcagt
    35941 acgtaacgtg cgtcgtgacg cgaacgacaa agtgaaagca ctgttgaaag ataaagagat
    36001 cagcgaagac gacgatcgcc gttctcagga cgatgtacag aaactgactg atgctgcaat
    36061 caagaaaatt gaagcggcgc tggcagacaa agaagcagaa ctgatgcagt tctgatttct
    36121 tgaacgacaa aaacgccgct cagtagatcc ttgcggatcg gctggcggcg ttttgctttt
    36181 tattctgtct caactctgga tgtttcatga agcaactcac cattctgggc tcgaccggct
    36241 cgattggttg cagcacgctg gacgtggtgc gccataatcc cgaacacttc cgcgtagttg
    36301 cgctggtggc aggcaaaaat gtcactcgca tggtagaaca gtgcctggaa ttctctcccc
    36361 gctatgccgt aatggacgat gaagcgagtg cgaaacttct taaaacgatg ctacagcaac
    36421 agggtagccg caccgaagtc ttaagtgggc aacaagccgc ttgcgatatg gcagcgcttg
    36481 aggatgttga tcaggtgatg gcagccattg ttggcgctgc tgggctgtta cctacgcttg
    36541 ctgcgatccg cgcgggtaaa accattttgc tggccaataa agaatcactg gttacctgcg
    36601 gacgtctgtt tatggacgcc gtaaagcaga gcaaagcgca attgttaccg gtcgatagcg
    36661 aacataacgc catttttcag agtttaccgc aacctatcca gcataatctg ggatacgctg
    36721 accttgagca aaatggcgtg gtgtccattt tacttaccgg gtctggtggc cctttccgtg
    36781 agacgccatt gcgcgatttg gcaacaatga cgccggatca agcctgccgt catccgaact
    36841 ggtcgatggg gcgtaaaatt tctgtcgatt cggctaccat gatgaacaaa ggtctggaat
    36901 acattgaagc gcgttggcta tttaacgcca gcgccagcca gatggaagtg ctgattcacc
    36961 cgcagtcagt gattcactca atggtgcgct atcaggacgg cagtgttctg gcgcagctgg
    37021 gggaaccgga tatgcgtacg ccaattgccc acaccatggc atggccgaat cgcgtgaact
    37081 ctggcgtgaa gccgctcgat ttttgcaaac taagtgcgtt gacatttgcc gcaccggatt
    37141 atgatcgtta tccatgcctg aaactggcga tggaggcgtt cgaacaaggt caggcagcga
    37201 cgacagcatt gaatgccgca aacgaaatca ccgttgctgc ttttcttgcg caacaaatcc
    37261 gctttacgga tatcgctgcg ttgaatttat cggtactgga aaaaatggat atgcgcgaac
    37321 cacaatgtgt ggacgatgtg ttatctgttg atgcgaacgc gcgtgaagtc gccagaaaag
    37381 aggtgatgcg tctcgcaagc tgaggataat ccggctacag agagtctcgc tatttgttag
    37441 cgtagggctt cagtgatata gtctgcgcca tctgatcgta agtagttggc tttataaggt
    37501 caggtatgcc gtggttttgc acggcttttt ttgtataggc ttcagtattc ctgagtaccg
    37561 taaaccctgt cagggaataa aaaacgcgtg atgttgtctg ctactcaacc acttagcgaa
    37621 aaattgccag cgcatggctg ccgtcatgtt gcgatcatta tggacggcaa tggtcgctgg
    37681 gcaaaaaagc aagggaagat tcgtgccttt gggcataaag ccggggcaaa atccgtccgc
    37741 cgggctgtct cttttgcggc caacaacggt attgaggcgt taacgctgta tgcctttagt
    37801 agtgaaaact ggaaccgacc agcgcaggaa gtcagtgcgt taatggaact gtttgtgtgg
    37861 gcgctcgata gcgaagtaaa aagtctgcac cgacataacg tgcgtctgcg tattattggc
    37921 gataccagtc gctttaactc gcgtttgcaa gaatgtattc gtaaatctga agcgctaaca
    37981 gccgggaata ccggtctgac gctgaatatt gcggcgaact acggtggacg ttgggatata
    38041 gtccagggag tcaggcaact ggctgaaaag gtgcagcaag gaaacctgca accagatcag
    38101 atagatgaag agatgctaaa ccagcatgtc tgtatgcatg aactggcccc tgtagattta
    38161 gtaattagga ctggggggga gcatcgcatt agtaactttt tgctttggca aattgcctat
    38221 gccgaacttt actttataga tgttctctgg cccgatttcg atgaacaaga ctttgaaggg
    38281 gcgttaaatg cctttgctaa tcgagagcgt cgtttcggcg gcaccgagcc cggtgatgaa
    38341 acagcctgat ggggggcgct tttgctgaag tatcgcctga tatctgcttt tgtgttaata
    38401 cccgtcgtca tcgcggcgtt gtttctgttg ccgccggtgg ggttcgccat tgtaacgctg
    38461 gtggtctgca tgctggcagc gtgggaatgg ggacagctta gcggttttac cactcgttcg
    38521 cagcgagtat ggttggcggt gttatgcggg ttattgttgg cgctgatgct ttttctgttg
    38581 ccggaatatc accgaaatat tcatcaaccg ctggttgaaa tctcactttg ggcttcgctg
    38641 ggttggtgga ttgtctcgct attgctggtg ctgttttacc caggttccgc agcaatctgg
    38701 cgtaactcta aaacattgcg ccttattttt ggcgtgctaa ccattgttcc cttcttctgg
    38761 ggcatgctgg cgttacgggc ctggcactat gacgagaatc attacagtgg cgcaatatgg
    38821 ctgctctatg tcatgatcct ggtatggggc gctgactccg gcgcatatat gtttggcaaa
    38881 ttgtttggta aacataagct ggcaccgaag gtttctccgg gtaaaacctg gcaaggcttt
    38941 ataggtggac tcgctactgc agcggtaatc tcatggggtt atggcatgtg ggcgaatctc
    39001 gacgtcgctc ccgtcacctt actcatttgc tctattgtcg cagcgttagc ctcagtgctc
    39061 ggcgatctga ccgagagtat gtttaagcgt gaagcaggaa ttaaggacag cggtcattta
    39121 attccaggac acggtggtat tttagatcgt attgatagcc tgacggctgc ggtaccggtc
    39181 tttgcttgct tgttgttact ggtattcagg acgctttaac ggaaggtaat atgctgagtt
    39241 ttctctggga tttggcttcg ttcatcgttg cactgggtgt acttatcact gtgcatgaat
    39301 ttggtcattt ctgggttgcc cggcgttgtg gtgttcgcgt tgagcgtttc tcaatagggt
    39361 ttggtaaggc gctctggcgg cgaactgata agctcggcac cgaatatgtt atcgccctga
    39421 tcccgctggg cggttatgtc aaaatgctgg atgagcgcgc agaaccggtc gttccggaac
    39481 tccgccacca tgccttcaat aataaatctg ttggccaacg agcggcgatt attgccgcag
    39541 gtccggttgc aaacttcatt tttgctatct ttgcctactg gctggttttt attattggtg
    39601 tgcctggcgt acgtccggtg gttggtgaaa tagcagccaa ttcgatagct gcggaagcac
    39661 aaattgcacc aggtacggaa ctaaaagccg tagatggtat cgaaacgcct gattgggatg
    39721 ccgtgcgttt gcagttggtc gataaaattg gcgatgaaag caccaccatt acagtagcgc
    39781 catttggcag cgaccaacgg cgggatgtaa agctcgattt acgtcactgg gcgtttgagc
    39841 ctgataaaga agatccggta tcttcgctgg ggattcgtcc tcgtgggctg caaattgaac
    39901 ctgtactgga aaatgtgcag ccaaactcgg cggcaagcaa ggcaggtttg caagcaggcg
    39961 acaggatcgt taaagtcgat ggtcagccct taacgcagtg ggtgaccttt gtgatgcttg
    40021 tccgggataa cccggggaaa tccttagcgt tagaaatcga aaggcaggga agtctcttgt
    40081 ctttgacatt aatcccggag agtaaaccgg gtaatggtaa agcgattggt tttgtcggta
    40141 ttgagccgaa agtcattcct ttgccagatg agtataaagt tgtacgccag tatgggccgt
    40201 tcaacgccat cgtcgaagcc acggacaaaa cgtggcagct gatgaagctg acggtcagta
    40261 tgctgggaaa attgatcacc ggtgatgtga aactgaacaa cctcagtggg ccgatctcta
    40321 tcgccaaggg ggctgggatg acagcggaac tcggggtagt ttattacctg ccgtttcttg
    40381 cgcttattag cgtgaactta gggataatta acctgtttcc gttgcccgta cttgacgggg
    40441 cgcatctgct gttccttgcg atcgaaaaga tcaagggcgg accggtatcc gagcgggttc
    40501 aagacttttg ttatcgcatt ggctcgattc tgctggtgct gttaatgggg cttgcacttt
    40561 tcaatgattt ctctcggtta tgagagttag ttaggaagaa cgcataataa cgatggcgat
    40621 gaaaaagttg ctcatagcgt cgctgctgtt tagcagcgcc accgtatacg gtgctgaagg
    40681 gttcgtagtg aaagatattc atttcgaagg ccttcagcgt gtcgccgttg gtgcggccct
    40741 cctcagtatg ccggtgcgta caggcgacac ggttaatgat gaagatatca gtaataccat
    40801 tcgcgctctg tttgctaccg gcaactttga ggatgttcgc gtccttcgtg atggtgatac
    40861 ccttctggtt caggtaaaag aacgtccgac cattgccagc attactttct ccggtaacaa
    40921 atcggtgaaa gatgacatgc tgaagcaaaa cctcgaggct tctggtgtgc gtgtgggcga
    40981 atccctcgat cgcaccacca ttgccgatat cgagaaaggt ctggaagact tctactacag
    41041 cgtcggtaaa tatagcgcca gcgtaaaagc tgtcgtgacc ccgctgccgc gcaaccgtgt
    41101 tgacctaaaa ctggtgttcc aggaaggtgt gtcagctgaa atccagcaaa ttaacattgt
    41161 tggtaaccat gctttcacca ccgacgaact gatctctcat ttccaactgc gtgacgaagt
    41221 gccgtggtgg aacgtggtag gcgatcgtaa ataccagaaa cagaaactgg cgggcgacct
    41281 tgaaaccctg cgcagctact atctggatcg cggttatgcc cgtttcaaca tcgactctac
    41341 ccaggtcagt ctgacgccag ataaaaaagg tatttacgtc acggtgaaca ttaccgaagg
    41401 cgatcagtac aagctttctg gcgttgaagt gagcggcaac cttgccgggc actccgctga
    41461 aattgagcag ctgactaaga tcgagccggg cgagctgtat aacggcacca aagtgaccaa
    41521 gatggaagat gacatcaaaa agcttctcgg tcgctatggt tatgcctatc cgcgcgtaca
    41581 gtcgatgcct gaaattaacg atgccgacaa aaccgttaaa ttacgcgtga acgttgatgc
    41641 gggtaaccgt ttctacgtgc gtaagatccg ttttgaaggt aacgatacct cgaaagatgc
    41701 cgtcctgcgt cgcgaaatgc gtcagatgga aggtgcatgg ctgggaagcg atctggtcga
    41761 tcagggtaag gagcgtctga atcgtctggg cttctttgaa actgtcgata ccgataccca
    41821 acgtgttccg ggtagcccgg accaagtaga tgtagtctac aaggtgaaag aacgtaacac
    41881 cggtagcttc aacttcggga ttggttacgg tactgaaagt ggcgtgagct tccaggctgg
    41941 cgtgcaacag gataactggt taggtacagg ttatgctgtt ggtatcaacg ggaccaaaaa
    42001 cgattaccag acctatgctg aattgtcggt aaccaacccg tacttcactg tagatggtgt
    42061 aagcctcggt ggtcgtctct tctataatga cttccaggca gatgacgccg acctgtccga
    42121 ctataccaac aagagttatg gtacagacgt gacgttgggc ttcccgatca acgaatataa
    42181 ctcgctgcgt gcaggtctgg gttatgtaca taactccctg tccaacatgc agcctcaggt
    42241 tgcgatgtgg cgttatctgt actctatggg tgaacatccg agcacctctg atcaggataa
    42301 cagcttcaaa acggacgact tcacgttcaa ctatggttgg acctataaca agcttgaccg
    42361 tggttacttc ccgacagatg gttcacgtgt caacctgacc ggtaaagtga ccattcctgg
    42421 atcggataac gaatactaca aagtgacgtt agacacggcg acttatgtgc cgatcgatga
    42481 cgatcacaaa tgggttgttc tggggcgtac ccgctggggt tatggtgatg gtttaggcgg
    42541 caaagagatg ccgttctacg agaacttcta tgccggtggt tccagcaccg tccgtggctt
    42601 ccagtccaat accattggtc cgaaagcagt ttacttcccg catcaggcca gtaattatga
    42661 tccggactat gattacgaat gtgcgactca ggacggcgcg aaagacctgt gtaaatcgga
    42721 tgatgctgta ggcggtaacg ccatggcggt tgccagcctc gagttcatca ccccgacgcc
    42781 gtttattagc gataagtatg ctaactcggt tcgtacttcc ttcttctggg atatgggtac
    42841 cgtttgggat acaaactggg attccagcca atattctgga tatccggact atagtgatcc
    42901 aagcaatatc cgtatgtctg cgggtatcgc attacaatgg atgtccccat tggggccgtt
    42961 ggtgttctcc tacgcccagc cgttcaaaaa gtacgatgga gacaaggcag aacagttcca
    43021 gtttaacatc ggtaaaacct ggtaagtgtt ctccacaaag gaatgtagtg gtagtgtagc
    43081 gatgacttta ggcgatcaat ataagatcgc cgggccacgc aaagaactgc accctccggt
    43141 gcaaatggga tggtaaggag tttattgtga aaaagtggtt attagcggca ggtctcggtt
    43201 tagcactggc aacttctgct caggcggctg acaaaattgc aatcgtcaat atgggcagcc
    43261 tgttccagca ggtagcgcag aaaaccggtg tttctaacac gctggaaaat gagttcaaag
    43321 gccgtgccag cgaactgcag cgtatggaaa ccgatctgca ggctaaaatg aaaaagctgc
    43381 agtccatgaa agcgggcagc gatcgcacta agctggaaaa agacgtgatg gctcagcgcc
    43441 agacttttgc tcagaaagcg caggcttttg agcaggatcg cgcacgtcgt tccaacgaag
    43501 aacgcggcaa actggttact cgtatccaga ctgctgtgaa atccgttgcc aacagccagg
    43561 atatcgatct ggttgttgat gcaaacgccg ttgcttacaa cagcagcgat gtaaaagaca
    43621 tcactgccga cgtactgaaa caggttaaat aagtaatgcc ttcaattcga ctggctgatt
    43681 tagcgcagca gttggatgca gaactacacg gtgatggcga tatcgtcatc accggcgttg
    43741 cgtccatgca atctgcacaa acaggtcaca ttacgttcat ggttaaccca aaataccgtg
    43801 agcatttagg cttgtgccag gcgtccgcgg ttgtcatgac ccaggacgat cttcctttcg
    43861 cgaaaagtgc cgcgctggta gtgaagaatc cctacctgac ttacgcgcgc atggcgcaaa
    43921 ttttagatac cacgccgcag cccgcgcaga acattgcacc cagtgcggtg atcgacgcga
    43981 cggcgaagct ggggaacaat gtatcgattg gcgctaacgc ggtgattgaa tccggcgttg
    44041 aactgggcga taacgtgatt atcggtgccg gttgcttcgt aggtaaaaac agcaaaatcg
    44101 gtgcaggttc gcgtctctgg gcgaacgtaa ccatttacca tgagatccag atcggtcaga
    44161 attgcctgat ccagtccgga acagtggtag gcgcagacgg ctttggttat gccaacgatc
    44221 gtggtaactg ggttaagatc ccacagattg gtcgcgtaat tattggcgat cgcgtggaga
    44281 tcggtgcctg cactaccatc gatcgcggcg cactggatga cactgttatt ggcaatggcg
    44341 tgatcattga taaccagtgc cagattgcac ataacgtcgt gattggcgac aatacggcgg
    44401 ttgccggtgg cgtcattatg gcgggcagcc tgaaaattgg tcgttactgc atgatcggcg
    44461 gagccagcgt aatcaacggg catatggaaa tatgcgacaa agtgacggtt acgggcatgg
    44521 gtatggtgat gcgtcccatc actgaaccag gcgtctattc ctcaggcatt ccgctgcaac
    44581 ccaacaaagt ctggcgcaaa accgctgcac tggtgatgaa cattgatgac atgagcaagc
    44641 gtctgaaatc gcttgagcgc aaggttaatc aacaagacta acgttccatc ttttgttcgc
    44701 caaactttac ggcctgtctc attcttacga ttgcggcagg ccgtgttatt attgtcgttt
    44761 cttatatttt gacaggaaga gtatcttgac tactaacact catactctgc agattgaaga
    44821 gattttagaa cttctgccgc accgtttccc gttcttactg gtggatcgcg tgctggattt
    44881 tgaagaaggt cgttttctgc gcgcagtaaa aaatgtctct gtcaatgagc cattcttcca
    44941 gggccatttc cctggaaaac cgattttccc gggtgtgctg attctggaag caatggcaca
    45001 ggcaacaggt attctggcgt ttaaaagcgt aggaaaactg gaaccgggtg agctgtacta
    45061 cttcgctggt attgacgaag cgcgcttcaa gcgcccggtc gtgcctggcg atcaaatgat
    45121 catggaagtc actttcgaaa aaacgcgccg cggcctgacc cgttttaaag gggttgctct
    45181 ggtcgatggt aaagtagttt gcgaagcaac gatgatgtgt gctcgtagcc gggaggcctg
    45241 atacgtgatt gataaatccg cctttgtgca tccaaccgcc attgtggaag agggcgcgtc
    45301 aattggcgcg aacgcacaca ttggtccttt ttgtatcgtt ggaccccatg tcggaattgg
    45361 tgagggtacc gtactgaaat ctcacgttgt cgtgaatggt catactaaaa ttggccgcga
    45421 taatgagatt tatcagttcg cctccatcgg cgaagttaac caggatctga aatatgctgg
    45481 cgaaccgacc cgtgtggaaa tcggcgatcg taaccgcatt cgcgaaagcg tcaccattca
    45541 tcgtggcaca gtccagggcg gtggattgac gaaggtgggc agcgacaact tactgatgat
    45601 caacgcgcac attgcgcacg attgtacggt aggtaaccgc tgtattctcg ccaacaacgc
    45661 aacgctggcg ggtcacgtat cggttgacga cttcgcgatc atcggcggca tgaccgcagt
    45721 ccatcagttc tgcatcattg gtgcgcacgt gatggttggc ggctgctccg gtgtggcgca
    45781 ggacgtccct ccttatgtca ttgcgcaggg taaccacgca acgccgttcg gtgtcaatat
    45841 cgaagggctg aagcgccgcg gattcagccg tgaggcgatt accgctatcc gcaatgcgta
    45901 taagctgatt tatcgtagcg gtaaaacgct cgatgaagtg aaaccggaaa ttgctgaact
    45961 ggcggaaaca tatccggaag tgaaagcctt taccgatttc ttttcacgct caacgcgcgg
    46021 tctgattcgt taatgactga acagcgtcca ttaacgattg ccctggtcgc cggagaaacc
    46081 tccggcgata tcctaggggc cggtttaatc cgcgctctga aagaacgtgt gcccaacgcc
    46141 cgctttgttg gtgttgccgg gccacgaatg caggctgaag gctgcgaagc ctggtacgaa
    46201 atggaagaac tggcggtgat gggcattgtt gaagtgctcg gtcgtctgcg tcgcttactg
    46261 catattcgtg ccgatctgac aaagcgtttt ggcgaactga agccagatgt ttttgttggt
    46321 attgatgcgc ctgacttcaa tattactctt gaaggtaacc tcaaaaagca gggtatcaaa
    46381 accattcatt acgtcagtcc gtcagtctgg gcgtggcgac agaaacgtgt tttcaaaata
    46441 ggcagagcca ccgatctggt gctcgcattt ctgcctttcg aaaaagcgtt ttatgacaaa
    46501 tacaacgtac cgtgccgctt tatcggtcat accatggctg atgccatgcc attagatcca
    46561 gataaaaatg ccgcccgtga tgtgctgggg atccctcacg atgcccactg cctggcgttg
    46621 ctaccgggga gccgtggtgc agaagttgaa atgcttagtg ccgatttcct gaaaacggcc
    46681 cagcttttgc gccagacata tccggatctc gaaatcgtgg tgccactggt gaatgccaaa
    46741 cgccgcgagc agtttgaacg catcaaagct gaagtcgcgc cagacttttc agttcatttg
    46801 ctggatggga tgggccgtga ggcgatggtc gccagcgatg cggcgctact ggcgtcgggt
    46861 acggcagccc tggagtgtat gctggtgaaa tgcccgatgg tggtgggata tcgcatgaag
    46921 ccttttacct tctggttggc gaagcggctg gtgaaaactg attatgtctc gctgccaaat
    46981 ctgctggcgg gcagagagtt agtcaaagag ttattgcagg aagagtgtga gccgcaaaaa
    47041 ctggctgcgg cgctgttacc gctgttggcg aacgggaaaa tcagccacgc gatgcacgat
    47101 accttccgtg aactgcatca gcagatccgt tgcaatgccg atgagcaggc ggcacaagcc
    47161 gttctggagt tagcacaatg atcgaatttg tttatccgca cacgcagctg gttgcgggtg
    47221 tggatgaagt cggacgcggg ccgttagttg gcgcggtcgt caccgctgcg gtgatccttg
    47281 acccggcgcg cccgattgcc gggctgaatg attccaaaaa gctgagcgaa aaacgccgtc
    47341 tggcgctctg tgaagagatc aaagagaaag cgttgagctg gagtctgggc cgcgcggaac
    47401 cccacgaaat cgacgagctg aacattcttc atgcgaccat gctggcgatg cagcgtgccg
    47461 tcgctgggct gcatattgcg ccggaatatg tgttgattga tggtaaccgc tgcccgaaat
    47521 taccgatgcc tgcgatggtt gtggtgaaag gcgatagccg cgtaccggaa atcagtgccg
    47581 cgtctatcct ggcgaaagtg acgcgtgacg ccgaaatggc ggcgctggat attgttttcc
    47641 cgcaatatgg ttttgcccaa cacaaagggt acccaaccgc ttttcatctg gaaaaactgg
    47701 ctgaacacgg cgcgaccgaa caccatcggc gcagctttgg gcctgtcaaa cgcgcactgg
    47761 gacttgcgtc ctgattcttg tgtcgagatt aagtaaaccg gaatctgaag atgtctgaac
    47821 cacgtttcgt acacctgcgg gtgcacagcg actactcgat gatcgatggc ctggccaaaa
    47881 ctgcaccgtt ggtaaaaaag gcggcggcgt tgggtatgcc agcactggcg atcaccgatt
    47941 tcaccaacct ttgtggtctg gtgaagttct acggagcggg acatggcgca gggattaagc
    48001 ctatcgtcgg ggcagatttt aacgtccagt gcgacctgct gggtgatgag ttaacccacc
    48061 tgacggtact ggcggcgaac aataccggct atcagaatct gacgttgctg atctcaaaag
    48121 cgtatcagcg cgggtacggt gccgctgggc cgatcatcga tcgcgactgg cttatcgaat
    48181 taaatgaagg gttgatcctt ctttccggcg ggcgcatggg cgacgtcgga cgcagtcttt
    48241 tgcgtggtaa cagcgcgctg gtagatgagt gtgtcgcgtt ttatgaagaa cacttcccgg
    48301 atcgctattt tctcgagctg atccgcaccg gcaggccgga tgaagaaagc tatctgcacg
    48361 cggcggtgga actggcggaa gcgcgcggtt tgcccgtcgt ggcgactaac gatgtgcgct
    48421 ttatcgacag cagcgacttt gacgcacacg aaatccgcgt cgcgatccac gacggcttta
    48481 ccctcgacga tcctaaacgc ccgcgtaact attcgccgca gcaatatatg cgtagcgaag
    48541 aggagatgtg tgagctgttt gccgacatcc ccgaagccct tgccaacacc gttgagatcg
    48601 ccaaacgctg taacgtaact gtgcgtcttg gtgaatactt cctgccgcag ttcccgaccg
    48661 gggacatgag caccgaagat tatctggtca agcgtgcaaa agagggcctg gaagagcgtc
    48721 tggccttttt attccctgac gaggaagaac gtgttaagcg ccgcccggaa tatgacgaac
    48781 gtctggagac tgaacttcag gttatcaacc agatgggctt cccgggctac ttcctcatcg
    48841 ttatggaatt tatccagtgg tcgaaagata acggcgtacc ggtagggcca ggccgtggct
    48901 ccggtgcggg ttcactggtg gcctacgcgc tgaaaatcac cgacctcgat ccgctggaat
    48961 ttgacctgct gttcgaacgt ttccttaacc cggaacgtgt ctccatgcct gacttcgacg
    49021 ttgacttctg tatggagaaa cgcgatcagg ttatcgagca cgtagcggac atgtacggtc
    49081 gtgatgcggt atcgcagatc atcaccttcg gtacaatggc ggcgaaagcg gtgatccgcg
    49141 acgtaggccg cgtgctgggg catccgtacg gctttgtcga tcgtatctcg aaactgatcc
    49201 cgcccgatcc ggggatgacg ctggcgaaag cgtttgaagc cgagccgcag ctgccggaaa
    49261 tctacgaagc ggatgaagaa gttaaggcgc tgatcgacat ggcgcgcaaa ctggaagggg
    49321 tcacccgtaa cgccggtaag cacgccggtg gggtggttat cgcgccgacc aaaattaccg
    49381 attttgcgcc gctttactgc gatgaagagg gcaaacatcc ggtcacccag tttgataaaa
    49441 gcgacgttga atacgccgga ctggtgaagt tcgacttcct tggtttgcgt acgctcacca
    49501 tcatcaactg ggcgctggag atgatcaaca agcggcgggc gaagaatggc gagccgccgc
    49561 tggatatcgc cgcgatcccg ctggatgaca agaaaagctt cgacatgctg caacgctcgg
    49621 aaaccacggc ggtattccag cttgaatcgc gcggcatgaa ggatctgatc aagcgtctgc
    49681 aacctgactg cttcgaagat atgatcgcac tggtggcgct gttccgccca ggtccgttgc
    49741 aatcagggat ggtggataac tttatcgacc gtaaacatgg tcgcgaagaa atctcctatc
    49801 cggacgtaca gtggcagcat gaaagcctga aaccggtact ggagccaacc tacggcatca
    49861 tcctgtatca ggaacaggtc atgcagattg cgcaggtgct ttctggttat accctcggtg
    49921 gcgcggatat gctgcgtcgt gcgatgggta agaaaaagcc ggaagagatg gctaagcagc
    49981 gttctgtatt tgctgaaggt gcagaaaaga acggagtcaa cgccgaactg gcgatgaaaa
    50041 tcttcgacct ggtggagaaa ttcgcgggtt acggatttaa caaatcgcac tctgcggcct
    50101 atgctttggt gtcatatcaa acgttatggc tgaaagcgca ctatccggcg gagtttatgg
    50161 cggcggtaat gaccgccgat atggacaaca ccgagaaggt ggtgggcctg gtggatgagt
    50221 gctggcggat ggggctgaaa atcctgccac cagatataaa ctccggtctt taccatttcc
    50281 acgtcaacga cgacggcgaa atcgtgtatg gtattggcgc catcaaaggg gtaggtgaag
    50341 gtccgattga ggccatcatc gaagcccgta ataaaggcgg ctacttccgc gaactgtttg
    50401 atctctgcgc ccgtaccgac accaaaaagt taaaccggcg ggtgctggaa aaactgatca
    50461 tgtccggggc gtttgaccgt cttgggccac accgcgcggc gctgatgaac tcgctgggtg
    50521 atgcgttaaa agcggcagat caacacgcga aagcggaagc tatcggtcag gccgatatgt
    50581 tcggcgtgct ggccgaagag ccggaacaaa ttgaacaatc ctacgccagc tgccaaccgt
    50641 ggccggagca ggtggtgtta gatggggaac gtgaaacgtt aggtctgtac cttacgggac
    50701 accctatcaa ccagtattta aaagagattg agcgttatgt cggaggcgta aggctgaaag
    50761 acatgcaccc gacagaacgt ggtaaagtca tcacggctgc ggggctcgtt gttgccgcgc
    50821 gggttatggt caccaagcgc ggcaatcgta tcggtatctg cacgctggat gaccgttccg
    50881 ggcggctgga agtgatgttg tttactgacg ccctggataa ataccagcaa ttgctggaaa
    50941 aagaccgcat acttatcgtc agcggacagg tcagctttga tgacttcagc ggtgggctta
    51001 aaatgaccgc tcgcgaagtg atggatattg acgaagcccg ggaaaaatat gctagcgggc
    51061 ttgctatctc gctgacggac aggcaaattg atgaccagct tttaaaccga ctccgtcagt
    51121 ctctggaacc ccaccgctct gggacaattc cagtacatct ctactatcag agggcggatg
    51181 cacgcgcgcg gttgcgtttt ggcgcgacgt ggcgtgtctc tccgagcgat cgtttattaa
    51241 acgatctccg tggcctcatt ggttcggagc aggtggaact ggagtttgac taatacagga
    51301 atactatgag tctgaatttc cttgattttg aacagccgat tgcagagctg gaagcgaaaa
    51361 tcgattctct gactgcggtt agccgtcagg atgagaaact ggatattaac atcgatgaag
    51421 aagtgcatcg tctgcgtgaa aaaagcgtag aactgacacg taaaatcttc gccgatctcg
    51481 gtgcatggca gattgcgcaa ctggcacgcc atccacagcg tccttatacc ctggattacg
    51541 ttcgcctggc atttgatgaa tttgacgaac tggctggcga ccgcgcgtat gcagacgata
    51601 aagctatcgt cggtggtatc gcccgtcttg acggtcgtcc ggtgatgatc attggtcatc
    51661 aaaaaggtcg tgaaaccaaa gaaaaaattc gccgtaactt tggtatgcca gcgccagaag
    51721 gttaccgcaa agcactgcgt ctgatgcaaa tggctgaacg ctttaagatg cctatcatca
    51781 cctttatcga caccccgggg gcttatcctg gcgtgggcgc agaagagcgt ggtcagtctg
    51841 aagccattgc acgcaacctg cgtgaaatgt ctcgcctcgg cgtaccggta gtttgtacgg
    51901 ttatcggtga aggtggttct ggcggtgcgc tggcgattgg cgtgggcgat aaagtgaata
    51961 tgctgcaata cagctcctat tccgttatct cgccggaagg ttgtgcgtcc attctgtgga
    52021 agagcgccga caaagcgccg ctggcggctg aagcgatggg tatcatcgct ccgcgtctga
    52081 aagagctgaa actgatcgac tccatcatcc cggaaccgct gggcggcgct caccgtaacc
    52141 cggaagcgat ggcggcatcg ttgaaagcgc aactgctggc ggatctggcc gatctcgatg
    52201 tgttaagcac tgaagattta aaaaatcgtc gttatcagcg cctgatgagc tacggttacg
    52261 cgtaattcgc aaaagttctg aaaaagggtc acttcggtgg ccctttttta tcgccacggt
    52321 ttgagcaggc tatgattaag gaaggatttt ccaggaggaa cacatgaaca tcattgccat
    52381 tatgggaccg catggcgtct tttataaaga tgagcccatc aaagaactgg agtcggcgct
    52441 ggtggcgcaa ggctttcaga ttatctggcc acaaaacagt gttgatttgc tgaaatttat
    52501 cgaacataac cctcgaattt gcggcgtgat ttttgactgg gatgagtaca gtctcgattt
    52561 atgcagcgat atcaatcaac ttaatgaata tctcccgctt tatgccttca tcaacaccca
    52621 ctcgacgatg gatgtcagcg tgcaggatat gcggatggcg ctctggtttt ttgaatatgc
    52681 gctggggcag gcggaagata tcgccattcg tatgcgtcag tacaccaacg aatatcttga
    52741 taacattacg ccgccgttca cgaaagcctt gtttacctac gttaaagagc ggaagtacac
    52801 cttttgtacg ccggggcata tgggcggcac cgcatatcaa aaaagcccgg ttggctgcct
    52861 gttttatgat tttttcggcg ggaataccct caaggctgat gtctctattt cggtcaccga
    52921 gcttggttcg ttgctcgacc acaccgggcc acacctggaa gcggaagagt acatcgcgcg
    52981 gacttttggc gcggaacaga gttatatcgt taccaacgga acatcgacgt cgaacaaaat
    53041 tgtgggtatg tacgccgcgc catccggcag tacgctgttg atcgaccgca attgtcataa
    53101 atcgctggcg catctgttga tgatgaacga tgtagtgcca gtctggctga aaccgacgcg
    53161 taatgcgttg gggattcttg gtgggatccc gcaccgtgaa tttactcgcg acagcatcga
    53221 agagaaagtc gctgccacca cgcaggcaca atggccggtt catgcggtga ttaccaactc
    53281 cacctatgat ggcttgctct acaacaccga ctggatcaaa cagacgctgg atgtcccgtc
    53341 gatccacttc gattccgcct gggtgccgta cacccatttt catccgatct accaggggaa
    53401 aagtgatctt cgaaacgcaa tcgacccaca aaatgctggc ggcgttatcg caggcttcgc
    53461 tgatccacat taaaggcgag tatgacgaag aggcgtttaa cgaagccttt atgatgcata
    53521 ccaccacctc gcccagttat cccattgttg cttcggttga gacggcggcg gcgatgctgc
    53581 gtggtaatcc gggcaaacgg ctgattaacc gttcggtgga gcgggcgctg cattttcgca
    53641 aagaggtcca gcggttgcgg gaagagtctg acggttggtt tttcgatatc tggcaaccgc
    53701 cgcaggtgga tgaagccgaa tgctggcccg ttgcgccagg cgaacagtgg cacggcttta
    53761 acgatgcgga tgccgatcat atgtttctcg atccggttaa agtcactatt ttgataccgg
    53821 ggatggacga acagggcaat atgagcgagg aggggatccc ggcggcgctg gtggcaaaat
    53881 tcctcgacga acgtgggatc gtagtagaga aaaccggccc ttataacctg ctgtttctct
    53941 ttagtattgg tatcgataaa accaaagcaa tgggattatt gcgtgggttg acggaattta
    54001 aacgctctta cgatctcaac ctgcggatca aaaatatgct acccgatctc tatgctgaag
    54061 atcccgattt ctaccgcaat atgcgtattc aggatctggc gcaagggatc cataagctga
    54121 ttcgtaaaca cgatcttccc ggtttgatgt tgtgggcatt cgatactttg ccggaaatta
    54181 tcatgacgcc acatcaggca tggcagagac agattaaagg tgaagtagaa accattgcgc
    54241 tggaacaact ggtcggtaga gtatcggcaa atatgagcct gccttatcca ccgggcgtac
    54301 cgctgttgat gccaggagaa atgctgacca aagagagccg cacggtactc gattttctac
    54361 tgatgctttg ttccgtaggg caacattacc ccggttttga aacggatatt cacggcgcga
    54421 aacaggacga agacggcgtt taccgcgtac gagtcctaaa aatggcggga taacttgcca
    54481 gagcggctta cgggcgagta acgtgctgtt aacaaataaa ggagacgtta tgctgggttt
    54541 aaaacaggtt caccatattg cgattattgc gacggattat gcggtgagca aagctttcta
    54601 ctgcgatatt cttggtttca cgctgcaaag cgaagtctat cgcgaagcgc gcgactcgtg
    54661 gaaaggggat ttggcgctta atgggcaata tgtgattgag cttttctctt ttccgttccc
    54721 gccggagcgc cccagccgac cggaagcttg cggcctgcgt catctggctt ttagcgttga
    54781 tgacatcgat gcggcagtgg cgcaccttga aagccataac gtgaagtgtg aagccatccg
    54841 tgtcgatcca tacacgcaaa aacgcttcac cttctttaac gatccggacg ggctgccgtt
    54901 ggaactgtat gagcagtaag gcttgtcatc gccgcatttg cccggtaacg tgccgggcat
    54961 tgctactgta aaatcgcacc atcatgacac tcacgctcaa tagacaactt ctcacctcac
    55021 gccagatttt ggtcgccttt agcggcgggc ttgactccac cgttctgctg catcagttgg
    55081 tgcagtggcg gacggaaaat ccgggcgtca ctctgcgcgc tattcatgtg catcacggtt
    55141 taagtgccaa tgccgatgcc tgggttacgc attgcgaaaa cgtctgccaa cagtggcagg
    55201 tgccgctggt ggtcgaacgc gtacaacttg cgcaagaggg gctggggatt gaggcccagg
    55261 cgcggcaggc gcgttatcag gcatttgccc gtaccctatt gcccggcgaa gtgctggtca
    55321 ccgcgcaaca tctcgacgat caatgtgaaa cctttctgct ggcgctaaaa cgcggtagcg
    55381 gccctgccgg gctttcggct atggcggaag tttcggagtt tgccggaaca cggcttatcc
    55441 gcccgttgct tgcccgcacg cggggggaac tggcgcagtg ggcattggcg catggtttac
    55501 gctggattga agacgaaagt aatcaggacg actcatacga tcgtaacttt ctgcgcctgc
    55561 gcgtagtgcc gttattgcag cagcgttggc cgcattttgc ggaagcaacg gcccgcagcg
    55621 ccgcactttg tgctgaacaa gagagtctgt tggatgaact gctggcggat gatttagcac
    55681 actgccaaac gtcgcagggg acgctgcaga ttgcgccaat gctggcgatg agtgatgccc
    55741 gccgcgcggc gattatccgt cgctggctgg cagggcagaa tgcaccaatg ccttcccgcg
    55801 aagcgctggt gcggatctgg caggaagtgg cgctggcgcg ggaagatgcc tccccctgtt
    55861 tacgcttggg cgcgtttgaa atccgccgct atcagtcgca actgtggtgg attaaatccg
    55921 tcaccgggca aagtgaaacc attgtgccgt ggcagacgtg gctacaaccg ctggaattac
    55981 cggcggggct gggaagcgta cagcttactg cgggaggcga tattcgccct ccgcgtgcag
    56041 acgaagcggt cagcgtgcgt ttcaaatcgg caggattgct gcatattgtc gggcgcaacg
    56101 gcggacgtaa gctgaagaaa atctggcaag agttaggcgt gccgccgtgg ctacgtgaca
    56161 ccacgccact gctgttttat ggcgaaacgc tgattgcggc ggcaggggta tttgtgacgc
    56221 aagaaggtgt ggctgaaggt gagaatggcg taagttttgt ctggcagaaa acgcttagtt
    56281 aagtgaaagc cggataagac gcatcaaacg tcgcatccgg cgaaagtcaa tcaggactcg
    56341 ctcaccacca ccgtaccgat ttccgggtgg ctaaagctgg taattttatc cagacgtagc
    56401 tcacgggttt cgccagcggc ctcgacgacc agatactcca catttttgcg ggagactaaa
    56461 tcgctggctt ttgcctgcaa tttttcgcca tctttcagct caagtgtcag cattaaatga
    56521 tgctggcagg cgagctcaag attatcgtaa tcatcacaat tgattggttg atacgtatca
    56581 ttcattaaca taatcgctca ccagtaagtt tgccgcagcg tatgctgctt tttccctgac
    56641 agcctcagaa agggcgtcgt cggcagccat ttcattcagc actttcaaaa cgcagcccag
    56701 cgcgtccgga acgtatccta agtctccgct ggcgatttcc gcgtaccgct tgcgtattaa
    56761 ctcacaatat ttttccacat gccctcctgt cagcacactg acttaaccgt ggatgcaagt
    56821 ctaagcctac gaagataaac tctgtttcgc aaggtgacta taccacactc atttctgcaa
    56881 tatcagcgcc gcaactgcac gtattccgtt acaatggcct cctgattcga aaggagtttt
    56941 cttatggcgc ttaaagcgac aatttataaa gcgacggtta atgtggccga tctcgaccgc
    57001 aaccagtttc tcgatgcctc tctgacgctg gcgcgccacc cttcagaaac ccaggagcgt
    57061 atgatgctgc gcctgctggc gtggctgaaa tatgctgatg aacgtctgca atttacccgt
    57121 ggtttgtgtg ccgatgatga gccggaagcg tggctgcgta acgatcacct gggcattgat
    57181 ttgtggattg agctggggct gccggatgag cggcggatta agaaagcctg cacccaggcc
    57241 gcagaagtgg cgctgtttac ctataatagt cgggcggcgc aaatctggtg gcagcaaaat
    57301 cagagcaaat gtgtgcagtt tgccaatctt tccgtctggt atctggacga tgaacaactg
    57361 gcgaaagtaa gcgcctttgc cgatcgtacc atgacgctgc aggcaacgat tcaggatggc
    57421 gtgatctggt tatcggacga taagaataat ctggaagtta acttaaccgc ctggcaacaa
    57481 ccttcatgat tgtgatttcc cgacatgttg ctattcccga tggtgagctt gagatcaccg
    57541 ccattcgtgc gcagggcgcg ggcgggcagc atgttaataa gacctcaacg gccattcatc
    57601 tgcgttttga cattcgggcg tccagcctgc cagagtatta caaagagcgt ctgctcgccg
    57661 ccagccatca tttgatcagc agtgatggcg tgattgtcat taaggcacag gaataccgca
    57721 gtcaggaact gaaccgcgaa gccgcgctag cccggctggt ggcagtgatt aaagatttaa
    57781 caacagaaca aaaagcccga cgacccacgc ggcccacccg tgcatcgaaa gagcgcaggc
    57841 tggcatcgaa agcacaaaaa tcaagcgcga aggcgatgcg cggcaaagta cgcagcggtc
    57901 gggaataaaa agaaggaata gatggtgaaa aaagcgatag tgacagcgat ggctgtaatc
    57961 agcctcttta ctctgatggg atgtaataac cgggccgaag tcgatacgct ttctccagca
    58021 caggctgccg aactgaaacc gatgccgcaa agttggcgcg gcgtgctgcc gtgtgctgat
    58081 tgtgaaggaa tcgaaacctc tctgttcctc gaaaaagacg gaacatgggt gatgaatgag
    58141 cgttatctcg gtgctcgtga agaaccttcc tccttcgctt cctacggtac atgggcgcga
    58201 accgctgaca agctggtatt aaccgacagc aaaggtgaaa agtcatatta tcgggcgaaa
    58261 ggcgatgcgc tggagatgct cgatcgtgaa ggcaatccga ttgaatcgca gttcaactat
    58321 acgctggaac cggcacaatc cagtttacct atgacgccga tgaccctgcg aggcatgtat
    58381 ttttatatgg ctgatgcggc gaccttcact gattgcgcga ccggaaaacg tttcatggta
    58441 gcgaataacg cagagctgga gcgtggctac ctggctgcgc gcggtcacag tgaaaaaccg
    58501 gtgttactgt cagtagaagg tcactttacg cttgaggcta atccggatac tggtgcgcca
    58561 accaaagtat tagcgcccga tacggcgggt aaattttacc cgaataagga ttgcagtagt
    58621 ttggggcagt aaacctgctt aaggcagaaa caaacgcaaa acaggccaga aggatatatt
    58681 tcaacatttt gaatttgcac gttttttgta ggccggataa ggcgtttacg ccgcatccgg
    58741 caatggtgct caaagcctga tgcgacgctg gcgcgtctta tcatgcctac aacccccctc
    58801 ataccttaag gcggataagg catttacttt atcaccgggt caaaccaaca aagcgacccg
    58861 ccttgatata aatccctggc ttcaggtgcc caacatactg taactgcgtt tctggcttaa
    58921 acgcagagac atcaccaata cgcatatgca tcagatcggc agggctaatc cagcccgatt
    58981 gcgccagtgt aagtggatgt ccggctttgg caaatgcatc agtgacaaat tccgaacaaa
    59041 accacgactt tttgtctcct tcgcccacac tgcttaactg cgctttcgcc aggccgctga
    59101 cgcactgctg gcgaaaatcc tcggagaact gattcagtga gcacatctgg cgagtcacca
    59161 taaagggaat aaattcgaca atgccgcgat agttataacc gctatctttg attttattgg
    59221 caaacgcggt gatatctgtg gcttgttgcg gggtaagatc cgggactcgt aagacgaaaa
    59281 gcttatcact atgcttcatc gcttttttaa gggaaacaat ctggacgcca gcgcctgtcg
    59341 cttctgcaac gttattatca cccagaaaga ttgcaacgtg actcacagag gaagtgctga
    59401 agacgcggat tccaaatgag gttaccccaa ggcttgagga gaacagcaaa tcgccgggtt
    59461 tgagatcagg tgccgttatt tcttttattg attgttcggt gaaagagctt tgatgctgga
    59521 atttgacagc ccatgttttt gcctcggcat ctactgctgt ggctgatggg gctggctgat
    59581 atcaacggta caagccgaaa gtaaaagaaa gctggggaga agcaggcggc agtacgcctt
    59641 tggtttatcc attttataca atccatgtaa aaaagggccc tgaaattcag gaccctttct
    59701 ggcatcagcc tttaatctgt ttcaccagat attcgacgat gtcaccagtc ttaattaact
    59761 gtttctcgcc gttgcgacga tatttatatt cgatatcgtc gttgtcgagg ttacggtcgc
    59821 ccagcacaat agtgtgcgga ataccgatca gttccatatc agcaaacatc acgcccggac
    59881 gctctttgcg gtcatccagc agcacttcga taccttgtgc acgcagttcg ctgtacagtt
    59941 tctcagcaag ctcttgtacg cggaaggatt tgtgcatgtt catcggcaga atcgccacct
    60001 ggaacggcgc gatagcgtca ggccatacga tgccgcgttc gtcgtagttc tgctcaatcg
    60061 ccgcagctac cacacgcgtt accccgatac cgtagcaacc catcgtcagg atttggttac
    60121 ggccatcttc accctgtacg gaggctttca gtgcttcgga gtacttggta cccagctgga
    60181 agatgtgacc aacttcgata ccacgtttga tcagcagcgt accctggcca tccgggcttg
    60241 gatcgccagc caccacgtta cggatatctg caacttccgg ggtagcgaca tcgcgatccc
    60301 agttgatacc gaagtagtgt ttaccatcga tgttagcacc agcagcgaaa tcactcatcg
    60361 ccgcaacggt acggtcaatc accaccggaa tcggcatgtt taccggaccc agtgaacccg
    60421 gaccggcttt aaccacagca cgaatttctt cttcggtcgc gaaagtcagc gggcttgcaa
    60481 cctgcggcag tttttctgct ttaacttcgt tcagctcgtg atcaccgcgc accagcagcg
    60541 caaccagcgg gaagctgctg ccttcaaccg ctttaaccag cagagtctta accgttttct
    60601 caatcggcag attgaactgt tcaaccagtt ccgcgatggt tttcgcgttc ggcgtatcaa
    60661 ccagcgtcat ttcctgggta gcagcagcgc gcggttcttt cggcgcgata gcttctgcca
    60721 gttcaatgtt cgctgcatag tcagaggtgt cggagaagac cacatcgtct tcaccgctct
    60781 gcgccagcac ctggaattcg tgagaggcgc tgccgccgat agaaccggtg tcggcttgca
    60841 cggcgcggaa atccagcccc atgcggctga agattttgct gtaggccgca tacattgcat
    60901 cgtaggtttc ctgcagggat tcctgagaag tatggaaaga gtaagcatct ttcatcagga
    60961 attcgcggga acgcatgacg ccgaaacgcg gacgcacttc gtcgcggaac ttggtctgga
    61021 tctgatagaa gttcagcggc agctgtttgt aagagctaag ctcgttacga atcaggtcag
    61081 tgataacttc ttcatgagtt gggccgagta cgaacggacg ctcgccacgg tcaacaaaac
    61141 gcagcagttc cggaccgtac tgttcccaac gaccactctc ttgccacaaa tcggctggct
    61201 gaaccaccgg catcgacacc tcgattgcac cggcgttgtt catctcttca cgcacgatgt
    61261 tttcgacttt tttcagaacg cgcacgccgg tcggcagcca ggtatataac ccggaggcca
    61321 gcttgcggat catcccggcg cgcagcatca gctgatggct gatcacctcg gcgtcggcag
    61381 gtgtctcctt gagagtggag agcaggtatt ggctagtacg catgttgtta cggttccagt
    61441 tggaaggtag aacaggctca aggcgagcct gggacaaaaa agtgatttag tttaccagtg
    61501 caaaagaaat gtcaaaagag aagggcgtga atttaacgcg gttccagcgc aaagacttca
    61561 aaacctgcgt cggtgacgcg ccagcgaacg ttaaaatcat gtagccagac ggcataggtt
    61621 ttgcccgttt cctcaccttt atgataggcc gggcgcgggt cctgcgccag tacttcgcgg
    61681 ataaacagcg ttaactgcgg ataacgcttc tccagcgtca aaagctgctt ttcgacctct
    61741 gcggtaaaac tcaccgccat ctctgcagct ggcgcacttt gcgcatagct ggcactggca
    61801 tcgggaagcg attcggcaaa ggggagatac ggtttgatat ccactaccgg cgtaccatcg
    61861 accagatcca gactgccgag cttcagaatc acgctgtctt tatggcaaac aacctctttc
    61921 agctctacca gcgacatacc aattgggtta gggcggaaag tagagcgtgt tgcgaaaacc
    61981 cccattctgg cgttaccgcc gaggcgcggt ggacgcacag tcggacgcca gccgccttcc
    62041 atcgtttgat gaaagacgaa aaggatccat aaatggctga acgcttccag gccgcgaacg
    62101 gcgtcggcct ggttgtaggg agcaatgaga tgcagttcgc cgttggcgct ttttaccaga
    62161 cctggctggc gcggaacggc gaatttttct ttatagggcg agcgaataac gcctatttgc
    62221 tcgaactgga aactgctcat ttcgccgtaa tgttaagcgc agagccgata catacagcct
    62281 gacgatagca gcctggcgta ccgctggtga cttcgcagct atgcagtaat accgcattgg
    62341 ctttcatttt agaggcgttg atttgcatcc gcttacgcgc ggttggaatg ctcggcggag
    62401 agtcctgatt agaggcctgg caagagtcgc cactgacttc accgagatcg cggaacggtt
    62461 tgccgactaa ttcttctgca ttggtataaa ttcggaccgg cgtggcgcgc ggcgctttcg
    62521 gttttgcagg ctccgctttc ggctggggtg cagtgctttg aacgggttcg acaggggatc
    62581 tgcttaacat ggaacagccg cttagcatga gtgctactaa acagatcggt aaagcacgca
    62641 tagtatttcc tcaatgtatg atcaaaacgt caatattgaa tcaggagctt gtaaaaatga
    62701 caagacgggc aagtgcccat cctgaatgat attacaaatt gtggaaacag cctaaaaatt
    62761 accagccttt aacagcgccg ccgttaaaca ctttgtttgc tgcttcgtaa acttcatcag
    62821 actgataagc ctggacgaat ttcttcacgt tctcggcgtc tttgttatct tcacgcgtta
    62881 cgatcaggtt tacgtacggg gagtctttat cttcgacaaa gataccgtct ttcgctggag
    62941 tcaggccaat ctggctggca taggtggtat tgataactgc cagagcgatt tgtgcgtcgt
    63001 ccagagatcg aggcagctgc ggtgcttcca gctcaacaat tttcagattt tttgggttct
    63061 caacaacatc aagtacggtc ggcagcaggc caacgccatc tttcagtttg atcaagccca
    63121 ctttttgcag cagcagcagt gaacgaccaa ggttagttgg atcgtttggc acggcaacct
    63181 gcgaaccatc ctgcagttca tccagtgatt tgattttctt ggagtaacca gcaatcggat
    63241 aaacaaaagt gttgcctact gcgaccagtt tgtagccacg atctttcagt tgctgatcaa
    63301 ggtacggttt atgctggaag gcgttggcgt cgatatcgcc tttgctcaat gcttcgtttg
    63361 gcagaacata gtcgttgaag gttaccagct caacgtccag gccatatttg tctttcgcaa
    63421 ctttctgcgc gacttctgca acctgctgtt cggcaccaac aatcacgccg actttaatgt
    63481 ggtttggatc tttttcatcc tgaccgcagc ctaccagtgc cagtgatcca atcagggctc
    63541 ccactgccgc aaaggttttg aatttgaacg ccatacctta ttccttcttc aattatttat
    63601 gttgtgttga acgttacttg cgagtgacag cccggacgat gcggtcgcct gcgaactgaa
    63661 ttaaataaac cagaatgacc agcaatacca gtaccgtatt catcaccgtc gcgttatagc
    63721 cgatgtagcc atactgatag ccaatctgac ctaaaccacc ggcaccgaca gcaccaccca
    63781 tcgcggaata accgactagg gtaatcaggg tgatagttgc cgcattcacc agacccggca
    63841 atgcttccgg taacagcact ttacggacga tctgcatcgg cgtggcaccc attgcacggg
    63901 aagcttcaat taacccggtt gggatctcca gcagagcgtt ctcgaccata cgggcaataa
    63961 acggtgctgc accaacggtt aacggaacaa tcgctgcctg caaaccaatc gatgtaccaa
    64021 caataacgcg ggtaaacgga atcatccata ccagcaagat aatgaacggg atagaacgga
    64081 aaatgttcac aatcgcagaa acggtacgat acagcttcgc gttagcaata atttgccccg
    64141 gacgcgtgac ataaagcaga acgccaaccg gcagaccaat cacaaagcca aaaaaaccgg
    64201 atacgaaggt cattgccagc gtttcccata cgccacgaac cagcagccac atcatcggct
    64261 cagacataac ccagtacctc tacttttaca tggtgttcct gcagccaggc aatggcggct
    64321 tgcgtatctt gttgtgtgcc gtgcatttca gtcagcatga tgccgaactt aacgccaccg
    64381 gcgtagtcca tctgcgcgct aataatgttg ttgttgacgt tgaaacgacg cgcggtttca
    64441 gaaagcagtg gggcatcgac cgattgaccg gtaaactcca gacgcagcat cggcacgcag
    64501 tcagtaaatg gctccgcttg cagacgttcc tggtaatctt ccgggatatc cagatgcagg
    64561 gtcgactgaa taaacttctg cgccagcggc gttttcggat gcgagaacac ttcacttacc
    64621 gtgtcctgct cgatcagttc gccattgctg atgaccgcca cgcaatcaca aatacgcttc
    64681 acaacgtcca tttcgtgggt gatcaacaga atcgtcaaac ccagacggcg gttaatgtct
    64741 ttcagcagtt cgagaataga acgtgtcgtt gccgggtcca gcgcgctggt ggcttcatca
    64801 cacagcaata ctttgggatt gctggctaat gcacgggcaa tcgccacacg ttgtttctgc
    64861 ccaccggaaa gattcgacgg gtagctatca tgcttatcgc caagaccaac caatgacagc
    64921 aattccgtca cgcgacgttt gatctcgtct ttcggtgtgt tgtccagctc cagcggcaga
    64981 gccacgttgc caaaaacagt acgcgaagag agcaggttaa aatgctggaa aatcatacca
    65041 atctggcggc gagctttggt caactcggat tctgacagcg tggtcagttc ctggccatcg
    65101 accagcacgc taccctcggt tgggcgctcc agcaggttta cacaacgtat aagcgtactc
    65161 ttacccgcgc ctgaggcacc gataacgcca taaatttgtc cagctggcac atgcaggctg
    65221 acgttgttca acgcctggat gatgcgggtg ccctggtgga acactttggt gatattcgaa
    65281 agttttatca ttgattattt attatcgtca ttaagttagt cgtggcatct cgaatgcctg
    65341 aaacgggcaa cgccgtcaat gaaatggatg ttaaggcatc cagacgtcta aatcaatcag
    65401 gtttatgcga agagcacttt cttgcaggtc gaaacatgcg atactagcgt cacatgcctt
    65461 attaaggagc tataaaaggt ggcaaagagc gtacccgcaa tttttcttga ccgtgatggc
    65521 accattaatg tcgatcacgg ctatgtccat gagatcgaca actttgaatt tatcgacggt
    65581 gttattgacg ccatgcgcga gctaaaaaaa atgggctttg tgctggtggt agtaaccaac
    65641 cagtctggca ttgctcgcgg taaatttacc gaagcacagt ttgaaacgct gaccgagtgg
    65701 atggactggt cgctggcgga ccgagatgtc gatctggatg gtatctatta ttgcccgcat
    65761 catccgcagg gtagtgttga agagtttcgc caggtctgcg actgccgtaa accacatccg
    65821 gggatgcttt tgtcagcacg cgattatttg catattgata tggccgcttc ttatatggtg
    65881 ggcgataaat tagaagatat gcaggcagcg gctgcggcga acgtgggaac aaaagtgctg
    65941 gtgcgtacgg gtaaacctat tacgcctgaa gcagaaaacg cggcggattg ggtgttaaat
    66001 agcctggcag acctgccgca agcgataaaa aagcagcaaa aaccggcata atgattaaaa
    66061 gatgagcgat tgaaataaaa atgcattttt ccacttgtct tcctgagacg actccctata
    66121 atgcgcctcc atcgacacgg cggatgtgaa tcacttcaca caaacagccg gttcggttga
    66181 agagaaaaat cctgaaattc agggttgact ctgaaagagg aaagcgtaat atacgccacc
    66241 tcgcgacagt gcgctaaagt gcgtcgcaac tgctctttaa caatttatca ggcaatctgt
    66301 gtgggcactc gaagatacgg attcttaacg tcgcaaggcg aaaaatg
//
LOCUS       DAJVUK010000006        64436 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.006, whole genome shotgun sequence.
ACCESSION   DAJVUK010000006 DAJVUK010000000
VERSION     DAJVUK010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 64436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.006"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..97
                     /locus_tag="OQQ57_000401"
     CDS             <1..97
                     /locus_tag="OQQ57_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1955277.1"
                     /translation="RLNAVLDYIDAVAATDTSTAPDVIWPELPEA"
     gene            complement(69..506)
                     /locus_tag="OQQ57_000402"
     CDS             complement(69..506)
                     /locus_tag="OQQ57_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1955278.1"
                     /translation="MFYSPSLNIFVNPALKDDYINANSWPDDALAVSDDVYNEFAINT
                     PPDDKIRVAGKNGLPTWALIPPPSYEELIQQAESERQLLLNQANEYMNSKQWPGKAAI
                     GRLKGEELAQYNLWLDYLDALELIDTSSAPDIEWPTPPAVQAR"
     gene            complement(508..894)
                     /locus_tag="OQQ57_000403"
     CDS             complement(508..894)
                     /locus_tag="OQQ57_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001537786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1955279.1"
                     /translation="MPVSHYLCIFLNVGLGELSLAGTASGVIGLNGYVTIPLIISGSR
                     RTLIIQWGQARFGGSGGEDAGYLNDFPFAFPSACYGMIVSHVGHTPSGAGILSASAIT
                     SNQFRGFSSIATAANAVLGRYIAIGV"
     gene            925..1491
                     /locus_tag="OQQ57_000404"
     CDS             925..1491
                     /locus_tag="OQQ57_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016529756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1955280.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKPDRPG
                     LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSIDTSTPMGR
                     FFFHVMGALAEMERELIVERTRAGLAAARAKGRVGGRRPKLTTEQWAQIGRLLEAGES
                     RQRIALIFDVGVSTIYRKFPANESNESP"
     gene            1634..2806
                     /locus_tag="OQQ57_000405"
     CDS             1634..2806
                     /locus_tag="OQQ57_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HCS1955281.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY
                     GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDITTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA"
     gene            2816..3331
                     /locus_tag="OQQ57_000406"
     CDS             2816..3331
                     /locus_tag="OQQ57_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HCS1955282.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            3386..3688
                     /locus_tag="OQQ57_000407"
     CDS             3386..3688
                     /locus_tag="OQQ57_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HCS1955283.1"
                     /translation="MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            3703..3822
                     /locus_tag="OQQ57_000408"
     CDS             3703..3822
                     /locus_tag="OQQ57_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCS1955284.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRDKAIQRSGASHE"
     gene            3815..6892
                     /locus_tag="OQQ57_000409"
     CDS             3815..6892
                     /locus_tag="OQQ57_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1955285.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIK
                     QLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQR
                     LAVQRLEERQKKLQQQTALVRAELYRAGISANDGASATARITRETMRYNRQLSEQEAR
                     LRRVGEQQRKMHAARGAYARRLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMVD
                     AMKGVAKQVNGLRDDNGNRTARFYEMQGAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     MVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTATVTRTSNALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMN
                     PLAVLRGGLAATGTVLRMLASGPLAMLRVALYAVSGLLGALLSLIGLVVTALAGVALV
                     VWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIV
                     NGPANVTSRRNTAALAAVVAGMMGVAATPAELPPLHPLALPAKGGEAMVSRAATVPPV
                     QRIEAPMQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            6889..7374
                     /locus_tag="OQQ57_000410"
     CDS             6889..7374
                     /locus_tag="OQQ57_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1955286.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PDNDMLTLSGVLMPEVTGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLL
                     S"
     gene            7371..8471
                     /locus_tag="OQQ57_000411"
     CDS             7371..8471
                     /locus_tag="OQQ57_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HCS1955287.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKLVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPLDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            8562..8780
                     /locus_tag="OQQ57_000412"
     CDS             8562..8780
                     /locus_tag="OQQ57_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HCS1955288.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRSIATPKESNPVQPHPMKSGQVALSL"
     gene            complement(9016..10701)
                     /locus_tag="OQQ57_000413"
     CDS             complement(9016..10701)
                     /locus_tag="OQQ57_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HCS1955289.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTAHSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            10971..11348
                     /locus_tag="OQQ57_000414"
     CDS             10971..11348
                     /locus_tag="OQQ57_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YbjM"
                     /protein_id="HCS1955290.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISSLFKPQHRKNQ"
     gene            complement(11378..11635)
                     /gene="grxA"
                     /locus_tag="OQQ57_000415"
     CDS             complement(11378..11635)
                     /gene="grxA"
                     /locus_tag="OQQ57_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HCS1955291.1"
                     /translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            11795..12082
                     /locus_tag="OQQ57_000416"
     CDS             11795..12082
                     /locus_tag="OQQ57_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HCS1955292.1"
                     /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH"
     gene            12066..12788
                     /gene="nfsA"
                     /locus_tag="OQQ57_000417"
     CDS             12066..12788
                     /gene="nfsA"
                     /locus_tag="OQQ57_000417"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HCS1955293.1"
                     /translation="MTPTIELICGHRSIRHFTDEPISEAQCEAIINSARATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALTAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            12849..13751
                     /gene="rimK"
                     /locus_tag="OQQ57_000418"
     CDS             12849..13751
                     /gene="rimK"
                     /locus_tag="OQQ57_000418"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HCS1955294.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIVHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERYATTEYCLKTGG"
     gene            13839..14315
                     /locus_tag="OQQ57_000419"
     CDS             13839..14315
                     /locus_tag="OQQ57_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HCS1955295.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            14666..15778
                     /gene="potF"
                     /locus_tag="OQQ57_000420"
     CDS             14666..15778
                     /gene="potF"
                     /locus_tag="OQQ57_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HCS1955296.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            15873..17006
                     /gene="potG"
                     /locus_tag="OQQ57_000421"
     CDS             15873..17006
                     /gene="potG"
                     /locus_tag="OQQ57_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HCS1955297.1"
                     /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTQLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEIASRVHEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLV
                     HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV
                     RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV"
     gene            17016..17969
                     /gene="potH"
                     /locus_tag="OQQ57_000422"
     CDS             17016..17969
                     /gene="potH"
                     /locus_tag="OQQ57_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HCS1955298.1"
                     /translation="MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
                     LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVAAAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            17966..18811
                     /gene="potI"
                     /locus_tag="OQQ57_000423"
     CDS             17966..18811
                     /gene="potI"
                     /locus_tag="OQQ57_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HCS1955299.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARHG"
     gene            18871..19359
                     /locus_tag="OQQ57_000424"
     CDS             18871..19359
                     /locus_tag="OQQ57_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HCS1955300.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            19400..20527
                     /gene="rlmC"
                     /locus_tag="OQQ57_000425"
     CDS             19400..20527
                     /gene="rlmC"
                     /locus_tag="OQQ57_000425"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HCS1955301.1"
                     /translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ"
     gene            complement(20702..21433)
                     /gene="artJ"
                     /locus_tag="OQQ57_000426"
     CDS             complement(20702..21433)
                     /gene="artJ"
                     /locus_tag="OQQ57_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein ArtJ"
                     /protein_id="HCS1955302.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(21724..22392)
                     /gene="artM"
                     /locus_tag="OQQ57_000427"
     CDS             complement(21724..22392)
                     /gene="artM"
                     /locus_tag="OQQ57_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HCS1955303.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(22392..23108)
                     /gene="artQ"
                     /locus_tag="OQQ57_000428"
     CDS             complement(22392..23108)
                     /gene="artQ"
                     /locus_tag="OQQ57_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HCS1955304.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            complement(23115..23846)
                     /gene="artJ"
                     /locus_tag="OQQ57_000429"
     CDS             complement(23115..23846)
                     /gene="artJ"
                     /locus_tag="OQQ57_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1955305.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
                     LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(23864..24592)
                     /gene="artP"
                     /locus_tag="OQQ57_000430"
     CDS             complement(23864..24592)
                     /gene="artP"
                     /locus_tag="OQQ57_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HCS1955306.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            complement(24810..25325)
                     /locus_tag="OQQ57_000431"
     CDS             complement(24810..25325)
                     /locus_tag="OQQ57_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1955307.1"
                     /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPGNV
                     AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPES
                     ARVASASTIPNRDARNIPLRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            25451..25774
                     /locus_tag="OQQ57_000432"
     CDS             25451..25774
                     /locus_tag="OQQ57_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HCS1955308.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            25771..26601
                     /gene="amiD"
                     /locus_tag="OQQ57_000433"
     CDS             25771..26601
                     /gene="amiD"
                     /locus_tag="OQQ57_000433"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiD"
                     /protein_id="HCS1955309.1"
                     /translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(26598..27608)
                     /locus_tag="OQQ57_000434"
     CDS             complement(26598..27608)
                     /locus_tag="OQQ57_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCS1955310.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMFSQANPQ
                     TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA
                     SQEACDKLPSGRVYNITNGEHRTLCSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER
                     FRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKL
                     PR"
     gene            complement(27707..29137)
                     /locus_tag="OQQ57_000435"
     CDS             complement(27707..29137)
                     /locus_tag="OQQ57_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HCS1955311.1"
                     /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            complement(29148..30149)
                     /gene="ltaE"
                     /locus_tag="OQQ57_000436"
     CDS             complement(29148..30149)
                     /gene="ltaE"
                     /locus_tag="OQQ57_000436"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HCS1955312.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMAGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKVRNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
     gene            complement(30186..31904)
                     /gene="poxB"
                     /locus_tag="OQQ57_000437"
     CDS             complement(30186..31904)
                     /gene="poxB"
                     /locus_tag="OQQ57_000437"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HCS1955313.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            complement(32037..33005)
                     /gene="hcr"
                     /locus_tag="OQQ57_000438"
     CDS             complement(32037..33005)
                     /gene="hcr"
                     /locus_tag="OQQ57_000438"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HCS1955314.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVHTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAKAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            complement(33017..34669)
                     /gene="hcp"
                     /locus_tag="OQQ57_000439"
                     /gene_synonym="priS"
     CDS             complement(33017..34669)
                     /gene="hcp"
                     /locus_tag="OQQ57_000439"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HCS1955315.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRS
                     IVGWPSVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            complement(34813..35712)
                     /gene="lysO"
                     /locus_tag="OQQ57_000440"
     CDS             complement(34813..35712)
                     /gene="lysO"
                     /locus_tag="OQQ57_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HCS1955316.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
     gene            complement(36207..36902)
                     /gene="aqpZ"
                     /locus_tag="OQQ57_000441"
     CDS             complement(36207..36902)
                     /gene="aqpZ"
                     /locus_tag="OQQ57_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HCS1955317.1"
                     /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
                     LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
                     ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATAKFAPAG
                     FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
                     GGLIYRTLLEKRD"
     gene            37328..38986
                     /locus_tag="OQQ57_000442"
     CDS             37328..38986
                     /locus_tag="OQQ57_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HCS1955318.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
                     KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAIEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(38983..39939)
                     /locus_tag="OQQ57_000443"
     CDS             complement(38983..39939)
                     /locus_tag="OQQ57_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HCS1955319.1"
                     /translation="MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQ
                     KFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEAL
                     RYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLKLTMMISMDKEGDSTILF
                     RNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVM
                     EAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHY
                     RLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
     gene            40090..41205
                     /gene="macA"
                     /locus_tag="OQQ57_000444"
     CDS             40090..41205
                     /gene="macA"
                     /locus_tag="OQQ57_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HCS1955320.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAEIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            41202..43148
                     /gene="macB"
                     /locus_tag="OQQ57_000445"
     CDS             41202..43148
                     /gene="macB"
                     /locus_tag="OQQ57_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HCS1955321.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHMVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTAT
                     GILFGWLPARNAARLDPVDALVRE"
     gene            complement(43221..43445)
                     /gene="cspD"
                     /locus_tag="OQQ57_000446"
     CDS             complement(43221..43445)
                     /gene="cspD"
                     /locus_tag="OQQ57_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HCS1955322.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            43768..44088
                     /gene="clpS"
                     /locus_tag="OQQ57_000447"
     CDS             43768..44088
                     /gene="clpS"
                     /locus_tag="OQQ57_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HCS1955323.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            44119..46395
                     /gene="clpA"
                     /locus_tag="OQQ57_000448"
     CDS             44119..46395
                     /gene="clpA"
                     /locus_tag="OQQ57_000448"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HCS1955324.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ELTYGFQSAQKHKAEAAH"
     gene            complement(46739..46826)
                     /locus_tag="OQQ57_000449"
     tRNA            complement(46739..46826)
                     /locus_tag="OQQ57_000449"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(46790..46792),aa:Ser,seq:gga)
     gene            complement(47080..47298)
                     /gene="infA"
                     /locus_tag="OQQ57_000450"
     CDS             complement(47080..47298)
                     /gene="infA"
                     /locus_tag="OQQ57_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HCS1955325.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(47583..48287)
                     /gene="aat"
                     /locus_tag="OQQ57_000451"
     CDS             complement(47583..48287)
                     /gene="aat"
                     /locus_tag="OQQ57_000451"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HCS1955326.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(48329..50050)
                     /gene="cydC"
                     /locus_tag="OQQ57_000452"
     CDS             complement(48329..50050)
                     /gene="cydC"
                     /locus_tag="OQQ57_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HCS1955327.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMMVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAESL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(50051..51817)
                     /gene="cydD"
                     /locus_tag="OQQ57_000453"
     CDS             complement(50051..51817)
                     /gene="cydD"
                     /locus_tag="OQQ57_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HCS1955328.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQCGEVELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEHELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(51940..52905)
                     /gene="trxB"
                     /locus_tag="OQQ57_000454"
     CDS             complement(51940..52905)
                     /gene="trxB"
                     /locus_tag="OQQ57_000454"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HCS1955329.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            53450..53944
                     /gene="lrp"
                     /locus_tag="OQQ57_000455"
     CDS             53450..53944
                     /gene="lrp"
                     /locus_tag="OQQ57_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HCS1955330.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            54079..58107
                     /locus_tag="OQQ57_000456"
     CDS             54079..58107
                     /locus_tag="OQQ57_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HCS1955331.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEE
                     EIIYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVTSVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQ
                     YNEPLQQPVQPQQPYYAPAAEQPVQQPYYAPAAEQPVQQPYYATAPEQPAQQPYYAPA
                     PEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV
                     VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSAAAVP
                     PVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKR
                     IRVPTRRELASYGIKLPSQRAAEEKAREARRNQYDSGDQYNDDEIDAMQQDELARQFA
                     QTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDF
                     EFSPMKALLDDGPHEPLFTPIVEPVQQPQQLVAPQQQYQQPQQPVAPQQQYQQPQQPV
                     APQPQYQQPQQQVAPQPQYQQPQQPVAPQQQDTLLHPLLMRNGDSRPLHKPTTPLPSL
                     DLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGV
                     KAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRD
                     NPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDV
                     RFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNL
                     AGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKK
                     VEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILD
                     QAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSD
                     SESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEA
                     QGIVSEQGHNGNREVLAPPPFD"
     gene            58262..58873
                     /gene="lolA"
                     /locus_tag="OQQ57_000457"
     CDS             58262..58873
                     /gene="lolA"
                     /locus_tag="OQQ57_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HCS1955332.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            58884..60227
                     /gene="rarA"
                     /locus_tag="OQQ57_000458"
                     /gene_synonym="mgsA"
     CDS             58884..60227
                     /gene="rarA"
                     /locus_tag="OQQ57_000458"
                     /gene_synonym="mgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein
                     RarA"
                     /protein_id="HCS1955333.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPREIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            60318..61610
                     /gene="serS"
                     /locus_tag="OQQ57_000459"
     CDS             60318..61610
                     /gene="serS"
                     /locus_tag="OQQ57_000459"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HCS1955334.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            61849..64293
                     /gene="dmsA"
                     /locus_tag="OQQ57_000460"
                     /pseudo
     CDS             61849..64293
                     /gene="dmsA"
                     /locus_tag="OQQ57_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
     gene            64304..>64436
                     /locus_tag="OQQ57_000461"
     CDS             64304..>64436
                     /locus_tag="OQQ57_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HCS1955335.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     "
BASE COUNT        15845 a        16179 c        17356 g        15056 t
ORIGIN      
        1 ccgacttaac gccgtgttgg attacattga cgcggtggcg gcaacagata ccagcaccgc
       61 gccggatgtc atctggcctg aactgccgga ggcgtaggcc attcaatatc tggagcactg
      121 gaggtatcaa tcagttccag tgcgtccaga taatccagcc acaaattata ttgcgccagt
      181 tcctcacctt tcagacgacc aatagcggct ttaccgggcc attgtttact gttcatgtat
      241 tcgttggcct gattaagcaa taattgcctt tctgattctg cctgttgaat aagttcttca
      301 tatgatggtg gaggtattag tgcccatgtg ggtaatccat tttttcctgc aacacgaatt
      361 ttgtcatctg ggggcgtatt gattgcaaat tcattataaa catcatcact gacagccaga
      421 gcatcatctg gccatgaatt tgcattaatg taatcatcct taagcgcagg attcacaaaa
      481 atgtttaaag atggactata aaacatatta aacccctata gcgatataac gacctaatac
      541 agcatttgca gcagtcgcta tgcttgaaaa accgcggaac tgatttgatg taattgcaga
      601 agccgacagg attcctgcgc ctgaaggtgt atgccccaca tgactaacta tcatcccata
      661 acatgctgac ggaaaggcaa aaggaaaatc attaagatat cctgcatctt caccaccaga
      721 cccaccaaat ctcgcctgcc cccactgaat aatcagtgtt ctccgggaac ctgaaataat
      781 taacggaatc gttacatacc cattcaggcc aatgacaccc gatgcagtgc cagccagaga
      841 taattctccc aaaccaacgt ttaagaaaat gcagagataa tggctaactg gcatcatccc
      901 cggtttttat tcaggggatt gatcatgctt attggctatg tacgcgtgtc aacaaatgac
      961 cagaacaccg atttgcaacg taatgcactg aactgcgcgg gatgtgagcg gatttttgag
     1021 gataaaatca gtggcactaa gcccgacaga ccggggctta aaaaactgct caggacacta
     1081 tcggcaggag acacgctggt tgtctggaag ctggacagac tgggacgcag tatgcggcat
     1141 cttgttacgc tgatagaaga gttgcgccag cgtggtgtga atttccgaag cctgactgac
     1201 agtattgata ccagtacccc aatgggccgt ttcttttttc acgtcatggg ggctctggct
     1261 gaaatggaac gtgaactgat agttgaacgt accagagcag ggctggctgc agctcgtgcc
     1321 aaaggcagag taggtggacg ccgtcctaag ttgaccaccg aacagtgggc acagattgga
     1381 cgtttactcg aggccggaga atcaagacag cgtattgcac tgatttttga tgtgggcgtt
     1441 tctaccattt atagaaaatt tccggcgaat gagagcaatg aatcgccctg agtcagtatt
     1501 attttgattt ttcctgtaag cggacaaata ccgtcatttt gtgtgaataa cgacacaact
     1561 gcgcttagct gtttgtcagg cacaatcact tcaacatagg gcgaagccta atccaatcag
     1621 gaggttcgcc actatggctc aggattacca ccacggggtg cgcgttgttg aagtcaacga
     1681 aggcacccga tccattacca cggtgagcac cgccatcgtg ggtatggtct gcacgggcga
     1741 tgatgccgat gcaaaaatgt ttcctcttaa taaacctgtg ctgatcactg atgtgctgac
     1801 cgccagcggt aaagcgggtg agtctggcac gctggcccgt tcgctggatg ccatcgctga
     1861 ccaggcaaaa cccgtgaccg ttgttgtgcg tgtgccgcag ggtgaaacgg aagaagaaac
     1921 cacaaccaat atcattggcg cagtgaccgc cgagggtaaa aaaacaggta tgaaagccct
     1981 gttatctgcc cagtcacagc tcggcgttaa accgcgcatt ctcggcgtgc caggtcacga
     2041 cacgaaggcg gtagctactg agttgctgag cgtggcgcaa agcctgcgtg gatttgctta
     2101 cctgtcagcg tatggttgca agacggtgca ggaagcaatc acttaccgtg aaaacttcag
     2161 tcagcgtgaa ggaatgctga tctggcccga ctttactggc tgggacacgg tgctgaatgc
     2221 cgaagcaacg gcttatgcca ccgcccgtgc gctcggtctg cgcgctaaaa ttgatgagca
     2281 gaccggatgg cacaaaagcc tgtccaacgt gggcgtgaac ggtgtcaccg gaatttctgc
     2341 tgatgtgttc tgggatctgc aggacccggc aaccgatgca ggtctgctta accagaacga
     2401 tatcaccacg cttatccgca aagacggttt ccgcttctgg ggttcccgct gtctgagcga
     2461 tgatccgctc tttgccttcg aaaactacac ccgcacggcg caggtgctga tggacacgat
     2521 ggcagaagcg cacatgtggg cggtggacaa accgctgaac ccgtcgctgg cccgcgacat
     2581 tatcgaaggt atccgcgcca aaatgcgtag cctggtcagt cagggctatc tcattggtgg
     2641 tgattgctgg ctggacgagt cggtgaacga taaagacacg ctgaaagccg ggaaactcac
     2701 catcgattac gactacacgc cagtgccgcc acttgaaaac ctgatgctgc gtcagcgcat
     2761 caccgatcag tacctggtga atttctccag ccaggtcagc gcgtaagggg acaacatggc
     2821 tttaccacgc aaattaaaac acctgaacct gtttaacgac gggaacaact ggcaggggat
     2881 cgttgagtcg ctgacgctgc cgaaattcac ccgcaaatat gagaagtatc gcggcggcgg
     2941 tatgcccgga gcggtggatg tggatctggg actggatgac agtgcactgg atacagaatt
     3001 ttccattggt ggtactgaac tgctgctgtt taagcagatg ggcaaagcca cggtggatgg
     3061 catccagctg cgctttaccg gctctattca gcgtgatgat accggggaag tgcaggccgt
     3121 ggagcttgtg gtgcgtggac gtcacaaaga agtagattcc ggcgagtgga agacgggcga
     3181 aagcaacact accaaagtga ccagtaccaa cagctacgcg aagctgacca tcaatggtga
     3241 ggtgctctat gaagtggacc tgatcaacat ggtggaaatt gtggacggtg tggacctgat
     3301 ggaagcgcac cgcaacgccc tcggcctctg atgtatctga acggcgcgga atgccgcgcc
     3361 agaacctaat ttacaggaca acaaaatgag cgataagcag actgaaaaga ccattcaact
     3421 ggatactccc atcatgcgcg gtaaaacaga aattaccgaa attgtgttgc gtaaaccgca
     3481 gtccggtgcg ctgcgcggca cacgcctgca ggccattatg gatatggatg tgaacgcgat
     3541 gatgaccgtg atcccccgca tctccagtcc ggcactgact gcacaggaaa ttgcagagat
     3601 ggacccggca gatctcactg ccatgtcggt tgaggttgtc acttttttgt tgaagaagtc
     3661 ggtgcttgcc ggtttaccga cagcctgacg gttgacgatc tggtggctga tatcgccacc
     3721 atctttcact ggccgccatc cgttactgac gttatgccgc tgaccgaagt gctggaatgg
     3781 cgggataaag cgattcagag aagcggggcc agccatgagt gacaataacc tgcgtctgca
     3841 ggtgattctt aatgcggttg acaaactcac ccgcccattt cgatccgcgc aggccagttc
     3901 aagagaactg gctgctgctg tcaaaaaatc ccgcgatgca ataaagcagc ttgatcaggc
     3961 cgggagcagt ctggacagct tccgaaagct gcaggcagaa aatcagaaat taggcgacag
     4021 gctgaactat gcccgccagc gtgcaaattt gctcagtcag gaactgggag cgatggggcc
     4081 gccttcgcaa cgtcaggttg ttgctctggg ccgtcaacgg ctggctgttc agcgcctaga
     4141 agaacgccag aaaaagctgc agcagcagac ggcgcttgtg cgtgcagaac tttatcgtgc
     4201 tggtatttca gctaatgatg gcgccagtgc gacggcccgc attacccgtg aaacgatgcg
     4261 ttataacagg cagctttctg agcaggaagc gaggttacga cgtgtcgggg agcaacagcg
     4321 aaaaatgcac gccgcccggg gggcttacgc caggcgtctt gaggtaaggg atcgtattgc
     4381 aggtgccgga gccaccacca cggctgcagg gctggcaatg ggcgcaccag tgatggcggc
     4441 agtaaaaagc tataccagca tggtagatgc catgaaaggt gtggcaaagc aggtcaatgg
     4501 tctgcgtgac gataatggca accgcactgc gcgtttttac gaaatgcagg gtgccatcaa
     4561 ggctgccagc gaacagttgc cgatggaaaa cggtgctgtg gacttcgccg cactggttga
     4621 aggtggtgcg cgcatgaacg tcgcaaaccc tgacgacagc tgggaagacc agaaacgtga
     4681 cctgctggcc ttcgccagca cggcggcaaa ggcggcaaca gcctttgaac tgccagcgga
     4741 tgaactgtca gaaagtctgg ggaaaatcgc ccagctctac aaaatcccta cccgcaatat
     4801 tgagcagctc ggtgatgcgc tgaactatct ggatgataac gccatgtcga aaggggcgga
     4861 catcattgat gtcatgcaac gcctgggcgg tgtggctgac cgtctggatt atcgtaaagc
     4921 ggcggcgctg ggttccacct tcctgacact cggcgctgcg cctgaggttg cagccagtgc
     4981 agcaaacgcg atggtgcgtg aattgtccat tgccaccatg caaagcaaga gtttctttga
     5041 agggatgaat ctgctgaaac tcaatccaga agtgattgaa aagcagatga cgaaggatgc
     5101 gatgggaact atccagcggg tgctggagaa ggtgaatgcg ctgccacagg ataagcgcct
     5161 gtctgccatg accatgttgt ttggtaaaga gtttggcgat gacgcagcga aactggcaaa
     5221 caacctgccg gaacttcagc gccagttaaa actgactgcg ggcaatgatg cgctcggttc
     5281 catgcagaaa gaatccgaca tcaacaagga ttcactttct gctcagtggt tgctggtcaa
     5341 aaccggagca cagaacacct tcagcagcct gggggaaacg ctgcgccagc cgctgatgga
     5401 tattctgtac acggtgaaaa gcgtcacggg ggcgttgcgt cgctgggtgg aagctaaccc
     5461 ggaactgacg ggcactctga tgaaagtagc cgctgtggta gctgccgtta ccgtgggcct
     5521 cggcacctta gcggtggcgc tggctgcagt gctggggccg ctggcagtca tccgtctggg
     5581 attctctgtg ctgggtatca aaacgttacc ttccgttacg gcaacagtaa cccgaaccag
     5641 caacgcgttg tcctggctgg ctggcgcacc actggcactg ctgcgacgcg ggcttgcttc
     5701 atcgggcaac gctgcaggtt tacttactgc gccgttgtcg tctttgcgcc gcacggcatc
     5761 actgacggga aatgtcctga aaactgtagc aggtgcgccg gttgcacttt tgcggtctgg
     5821 attatccggt ttacgtgcgg ttgctgtgat gtttatgaat ccactggcgg tactacgcgg
     5881 cggactggct gccacaggca cggtgctgcg tatgctcgca tccggtccac tggcgatgct
     5941 gcgcgttgcc ctgtatgccg tctctggtct gttaggtgct ctgctcagtc tgataggtct
     6001 tgtggttact gcactggcgg gtgtggcgct ggttgtctgg aaatactggc agcccatcac
     6061 cgcatttctc ggtggcgtgg tggaaggatt caaagcggcg gcaggtcctg tcagtgccgc
     6121 gttcgaaccg cttaagcctg tgttccagtg gattggcgac aaagtacagg cgctgtgggg
     6181 ctggtttact gatctgctga cgcccgttaa gtcgacctct gccgaactgc agagtgcagc
     6241 ggcaatgggg cgacgattcg gggaggctct ggcggaaggg ctgaatatgg tcatgcatcc
     6301 gctggactcc ctgaaatccg gcgtttcctg gttgctggag aaacttggca ttgtcagtaa
     6361 agaggccgca aaggcgaaac tgccggaaag cgtgacgcgt cagcaacctg cgacggtgaa
     6421 tgcagacggt aaagtgatga tgccatcggg tggttttccg tcatggggat atggctttgc
     6481 ggggatgtat gacagcggcg ggtatatccc gcgcgggcag tttggcatcg tcggtgaaaa
     6541 cgggccggaa attgttaacg gcccggcaaa tgtgaccagc cggagaaata cagctgcact
     6601 ggctgccgtt gttgccggaa tgatgggtgt tgctgctacg ccagcagagc ttccaccgtt
     6661 gcaccctttg gcacttcccg cgaaaggcgg tgaagcgatg gtgagtcgtg cagccactgt
     6721 gccgcccgtt caacggattg aggcaccgat gcagatcatc attcaaacgc agccaggaca
     6781 aagtgcgcag gatattgcgc gggaggtggc ccgccagctt gatgaacgtg aacgcaggct
     6841 gaaggcaaaa gccaggagta actacagcga tcagggggga tacgacgcat gatgatggtg
     6901 ctgggattgt acgtgtttat gctgcgcacc gtgccgtatc aggagctgca gtatcaacgc
     6961 agctggcgac atgcggcaaa cagccgggta aaccgacgcc cgtcaacgca gtttctggga
     7021 ccggacaacg acatgctgac gctttctggt gttcttatgc cggaggtaac gggcggcagg
     7081 ctgtcgttgc tggctctgga gcagatggca gaacagggaa aagcatggcc cctgattgaa
     7141 ggcagcggca cgatttacgg catgtatgtg attgagggac tgaatcagac taaaacggag
     7201 tttttccgcg acggtatgcc gcgccggatt gagttcaccc tgtcgctaaa acgcgtggat
     7261 gaatccctgt ccgatatgtt cggtgatctc agtgcgcaac tgaataatct gcagggaacg
     7321 gcaacatctg ccttaagcga tatcagtaaa acggtgggag ggctgctgtc gtgaatttca
     7381 gctctgaact gcttaacaaa ggcaacaaaa ctccggcatt cagcatcagt attgaaggca
     7441 gggatatcac cactgtgctg gacaaccgcc tgatggggct gacgctgacg gataaccggg
     7501 gctttgaagc ggaccagctt gatctggagc tggacgacgc cgatggaaaa atcgtgctgc
     7561 cgcgccgtgg ggctgtcatt acgctggcgc tgggctggaa gggacagccg cttttcccga
     7621 aaggggcatt cacggtggac gagattgaac acactggcgc accggatcgc ctgactatcc
     7681 gggcgcgaag tgctgatttt cgtgaaacgc tgaatacccg ccgtgaaaag tcgtggcaca
     7741 agaccaccgt tggggaagtg gtgaaggaaa tagctgcgcg gcacaaactg aagatggcat
     7801 tgggtgaaga cttgtcggat aaactcgtgg agcatataga ccagactaat gagagtgacg
     7861 gcagtttttt gatgcggctg gcgcgccagt acggtgctat tgcgtcggtg aaaaatggca
     7921 atctgttatt catccggcag gggcagggta aaagcgccag cggtaaacca ctaccggtga
     7981 tcactatcac acgcaaggac ggcgacagtc accgctttac cctggcagat cgcggagctt
     8041 acacgggcgt cattgccagc tggttgcata cccgcgaacc cgcgaagaaa gaaagcacca
     8101 cggtgaagcg taagcgcagg actaagaagc agaagaaaga gccggaagcg aagcagggcg
     8161 attacctggt gggtacggat gaaaacgtgc tggtacttaa tcgcacttat gccaaccgga
     8221 gcaacgccga acgggcagcg aaaatgcagt gggaacgcct gcaacgcggc gttgcatcat
     8281 tctcgctaca actggcggaa gggcgggcag atctctacac agaaatgcct gtgaaggtca
     8341 gtggctttaa acagccgcta gatgatgcgg aatggaccat tacgactctg acgcatactg
     8401 tcagcccgga taacggtttt acgaccagtc tggagcttga agtgaggatt gatgatttcg
     8461 aaatggaatg attcttcgca atggagaact tttaagtttg caaaatggaa taatgcggta
     8521 tcattattgt gaatttagca aaaatgggga gaactcgaaa aatgatgatt tgcccactgt
     8581 gtggaagtgc cgcccatact cgcagcagtt ttcaggtatc ttcattgacc aaagagcgtt
     8641 acaaccagtg ccagaacatt aactgcagcc atacttttgt tacccatgaa acttttgttc
     8701 gttcgattgc aacgccaaaa gagtcaaatc cggttcagcc gcatccaatg aaatcaggac
     8761 aggtggcgct ctctctttga cgctgccgcc attttgtcgc catcgttaaa aaacagtgct
     8821 tctaacatca tgattttaaa aggcataaat ttcagacaac aaaaaaccca tcaaccttga
     8881 accgaaatgg cggggttgat gggctccaca aaatggggac atcaaagaaa agcagtggca
     8941 ctaattaaga ctgatgccct gcggaaaagt tctgcggttg tgcaaaaaaa tttcattttc
     9001 agggcaactt cagttttatc ctaatcctgg ccataccatg acgatgattg tccctgccag
     9061 cgtcagcagg acgttggcga ttgcgtaggt gcccgcatag cccagcgcag ggatgttact
     9121 gtgagctgta tcactgatga tctccattgc cggcgcgcag gtgcgtgcgc ccatcattgc
     9181 gccgaacaac agtgcgcggt tcattcgcaa tacataagca ccgaacaaga aacagataac
     9241 cacgggcaca agactgacaa ttaatccggc aatcaacatc tgaccgccaa tcgcgcccag
     9301 gccgttatta ataccgctac cggcgctcag accaacgcct gccataaaca ccatcaagcc
     9361 gaactctttc accatgctta atgcaccttg cggaatgtaa ccgaaggtcg ggtggttagc
     9421 acgcataaag cccagcataa ttccggcgaa taacaacccg gcagcgttcc ccatgccgaa
     9481 actgaatgtg ctgaactgga aggtgatcat cccgatcatc agcccaataa caaagaaggc
     9541 gcaaaatgcc agcaggtcag tgacctggct gtgaatcgag ataaagccga tgcgatcggc
     9601 gatggttttt acgcgacggg catcaccgct gacttgtaaa acgtcacctt tgttaagcac
     9661 gacgttgtca tctatcggca tctcaatctg gctacgaatg acgcggttaa ggaagcaacc
     9721 gtgatcggtc aacttcagtt gtgcgagacg tttacctaca gcgttatggt ttttaacgac
     9781 cacttcttca gtgacgatac gcatgtcgag aaggtcacga tcgaaaactt ctttaccgtt
     9841 acggaagctg ggatcgagtc gggcatgggc gtcgggatag cctaccaacg ctatttcatc
     9901 gcccatttgt agcacggcat caccgtctgg atttgccaga atcccgttac gtcgaatacg
     9961 ttcaatgtag cagccggttt gtcgataaat acccagttca cgcagatttt tgccgtcggt
    10021 ccaggccacc agctccgggc cgacgcgata ggcgcggatc accggtaaat aaaccttacg
    10081 gttggcatca gtgtccaggc cacgttcgcg ggcgatttgc tgggcgctgg tctgtaagtc
    10141 ctgatgctgc aatttcggca agtaacgcgc accaacaatc aaactcacca gaccgattaa
    10201 ataggttaag gcatacccga ggctcagatt atccagtgcc agtgagagct gcctgctttc
    10261 catgccggaa tgacgcagtg tatcgccagc accgaccaga accggtgtcg acgtcataga
    10321 gcctgctaac ataccggccg tcaggccaat atcccagcca aacagcttac ctaaccctaa
    10381 ggcgatcacc agcgcactgc caaccatcac cagtgctaac attaggtaat ttttcccatc
    10441 gcgaaaaaaa atggaaaaaa agttcggtcc ggcttcgacc ccgacgcaga aaataaacag
    10501 cataaagcca agattaagcg catcggtgtt aatgctgaaa tgttgttggc ctaataacag
    10561 cgatacgact aaaacgccaa tggaattacc cagttggatc gaaccaagtc gtaactttcc
    10621 gagacatagc ccaagcgcga ggaccacaaa taataacaga atgtaattcc catttaacaa
    10681 ttcggcgacg tttatattca cggaggctaa cttcttgttt actagtaagc tgttgaaaga
    10741 aatggtaatt tacgataatg ttttttacca gaattcaggg cgcagattca ttcagcgcac
    10801 ctaaacgata gtaaagtaac aatatatttt actagtgtaa tcacattagg tatcaacggc
    10861 tatatgaatt gcgttggcct atattagcat ggaatgcgaa gcggctttat cttactgaac
    10921 gccacactgg cgaaaaatgt gttcgataga cgcagtgtca ggaggaacga gtgaaacata
    10981 aacaacgttg ggcgggggca atctgctgtt ttgtcctctt cattgtggtg tgcctttttc
    11041 tggcgacgca catgaaaggc gcttttcggg ctgccgggca tcctgaaatc ggcttgctgt
    11101 ttttcattct tcctggagca gttgccagtt tcttttcaca gcgtagagaa gtcctgaaac
    11161 ctctatttgg cgcaatgctg gcggcaccct gttcaatgct cattatgcgg ctgttttttt
    11221 caccgacgcg ctcattctgg caagagctgg catggttact aagcgcggtg ttctggtgtg
    11281 cgctgggggc actgtgtttc ttatttatca gtagtttgtt taaaccacag cacagaaaaa
    11341 atcagtaaag ccctcaacgc gagggcttgt cagacgatca ggcgtccaga ttttctttca
    11401 cccatgcagc aaaatcggta tagccgccga tatgttgctg atcgacaaaa atctgcggca
    11461 cggtttctac gggtttacct gccttttgtt gtagatcttc tttagtgatc ccttccgcac
    11521 gaatatctac atactgatac tgaaaatcat cgcgttcatt gctcaatttc tcagccagat
    11581 cttttgcacg cacacagtaa gggcaacccg aacgaccaaa aataacggtt tgcattattt
    11641 ctctcctcat agatttatgc ctgtaatgat cacgctaaaa tgtattcgct gaaagtaggt
    11701 ttaacctgtt gcattaattg ctaaaagcta taactgttaa acacaataca gtgaaaagtt
    11761 ttagactgaa ggctcacttt gcagagggaa gcgtatgcgc gcgatcggta aattgcctaa
    11821 aggcgtgttg atactggaat ttatcggaat gatgctactg gcggtggcgc tgctgtcggt
    11881 aagcgactcc ctgtcgctgc ctgagccatt ttctcggcca gaagtgcaga ttctgatgat
    11941 ttttctcggt gttttgctca tgcttcccgc tgcggtggtg gttattcttc aggtggcaaa
    12001 acgtcttgcc ccacagctga tgaaccgtcc accgcaatat tcacgttcag aaagagaaaa
    12061 agataatgac gccaaccatt gaacttattt gtggccatcg ctccattcgc catttcactg
    12121 atgaacccat ttccgaagcg cagtgtgagg cgattattaa cagcgcccgt gcgacgtcca
    12181 gttccagttt tttgcagtgt agtagcatta ttcgcattac cgacaaagca ttacgtgaag
    12241 aactggtgac gctgaccggc gggcaaaaac acgtagcgca agcggcggag ttctgggtgt
    12301 tctgtgccga ctttaaccgc catttacaga tctgtccgga tgctcagctc ggcctggcgg
    12361 aacaactgtt gctcggtgtc gttgatacgg caatgatggc gcagaatgca ttaaccgcag
    12421 cggaatcgct gggattgggc ggggtatata tcggcggcct gcgcaataat attgaagcgg
    12481 tgacgaaact gctgaaatta ccgcagcatg ttctgccgct gtttgggctg tgccttggct
    12541 ggcctgcgga taatccggat ctcaagccgc gtttaccggc ctccattttg gtgcatgaaa
    12601 acagctatca accgctggat aaagacgcac tggcgcagta tgacgagcaa ctggcggaat
    12661 attacctcac ccgtggcagc aataatcgcc gggatacctg gagcgatcat atccgccgaa
    12721 caatcattaa agaaagccgc ccatttattc tggattattt gcacaaacag ggttgggcga
    12781 cgcgctaaaa ccgccacgtc gatgtatgat acgcgggctt ttgaccaggt ctgacagaga
    12841 ggtgcagggt gaaaattgcc atattgtccc gggatggaac gctctattcg tgtaagcggc
    12901 tgcgtgaagc cgctatacag cgcggtcacc tggttgaaat tcttgatccg ctttcttgct
    12961 acatgaacat aaatcctgcg gcgtcttcta ttcactacaa aggccgcaag ttaccccatt
    13021 ttgacgcagt gatcccgcgt attggcaccg ccattacctt ttatgggacg gcggcactgc
    13081 gccagttcga gatgctgggg agctatccgc tcaatgagtc ggtcgccatt gcccgggcgc
    13141 gtgacaaatt gcgttccatg caactgctgg cgcgtcaggg catcgacctg cctgtcacgg
    13201 gcattgtgca ttcgccggat gataccagcg atttaatcga catggtcggt ggtgcgccgc
    13261 tggtggtcaa gttggttgaa ggcacgcagg gaattggcgt cgtgctggcg gagacgcgtc
    13321 aggcggcgga aagcgtgatt gacgctttcc gcggtctgaa cgcgcatatt ctggtgcagg
    13381 aatatatcaa agaggcgcaa gggtgcgata tccgctgtct ggttgttggc gatgaagtgg
    13441 tcgctgcgat tgaacggcgg gcgaaagagg gcgattttcg ttccaatttg catcgtggcg
    13501 gcgcggcaag cgtcgccagt atcacaccac aggagcgtga aatcgcgata aaagccgcgc
    13561 gaacgatggc gctggacgtt gctggtgtgg atattctgcg tgctaatcgc gggccgttgg
    13621 tgatggaagt gaatgcgtcg ccggggctgg aaggaataga aaaaaccact ggtatcgaca
    13681 tcgcgggtaa aatgatccgc tggatcgaac gctacgctac gacagaatat tgcctgaaaa
    13741 cgggtggtta gtcgcaatca cattactgat catggttttg cctgcgcttt ttgcgtaagc
    13801 tgtgccggtc tttttatcga aagaggttgt acaaaattat gacatcgctg gtcgttcctg
    13861 gtctggatac gctgcgtcaa tggctcgatg acctggggat gagttttttt gaatgtgata
    13921 actgtcaggc tctgcatctg ccccatatgc agaatttcga cggtgtcttt gatgccaaaa
    13981 tcgatctgat cgataacacg atcctgtttt ctgccatggc ggaagtccga ccttcagccg
    14041 tattgccgct ggcggcggat ttatctgcca tcaatgccag ttcgctgacc gtgaaagcat
    14101 ttcttgatat gcaggatgat aatctgccaa agctggtggt ttgccagtct ttatccgtta
    14161 tgcagggcgt aacctacgag cagtttgcat ggttcgtgcg tcagagcgaa gagcagattt
    14221 cgatggtcat tcttgaagct aatgcccatc aactgctgtt accgactgac gatgaagggc
    14281 aaaacaacgt taccgaaaac tatttcctcc actgataact cctttcgagc acgcagtcgc
    14341 tggtgcagtg actgcgcact gcaaaattat ctgctgtttt taaccttttc ttaaagatta
    14401 tttcacttct cttgtgccga tttggcttta tcacatagag caaatacgca taacaatttg
    14461 ttaaataccg ttttttaatc cgagctatag tctcaaaccc tggctaaagt tattcttgcg
    14521 atgcttttat atagcgagca gtgctggccg ggagagagtt atcttttctt acaccgcgcc
    14581 gataaaaaat atgcacgttt attgcatatc ttttagtatg acaacttttg ttcgtttgtt
    14641 aacgaacttt cagaaggaaa gagatatgac cgccttaaat aaaaaatggc tttcgggtct
    14701 ggttgcgggt gctctgatgg ccgtctctgt cggcacgctc gcggctgaac aaaaaacact
    14761 ccacatttat aactggtctg attatatcgc ccctgacacg gtggccaatt ttgaaaaaga
    14821 aaccggtatt aaagtcgtct acgatgtttt cgactctaac gaagtactgg aaggcaaatt
    14881 aatggcgggt agcaccggct ttgacttggt ggttccatct gccagctttc ttgaacgcca
    14941 gttgactgcg ggagttttcc agccgctgga caaaagcaaa ttgccggagt ggaagaatct
    15001 cgacccggag ctgctgaagc tggtcgccaa acacgatccc gacaataaat ttgctatgcc
    15061 ctatatgtgg gcgacgaccg ggattggcta taacgttgat aaagttaaag ctgtgctggg
    15121 cgaaaacgcg cccgtcgata gctgggactt gatcctcaaa cctgaaaatc tggaaaaact
    15181 gaaaagctgc ggtgtctctt tcctggatgc gccagaagaa gtttttgcta ccgtgttgaa
    15241 ttatctcggc aaagatccca acagcactaa agcggatgat tacaccggac cggcaaccga
    15301 tctgctgtta aagctgcgcc cgaacattcg ttatttccat tcatctcaat acattaacga
    15361 cctggcaaac ggcgatattt gcgtcgctat cggctgggca ggtgatgtct ggcaggcgtc
    15421 aaaccgcgcg aaggaagcga agaatggagt gaatgtctcg ttctcgattc caaaagaagg
    15481 ggcgatggcg ttctttgatg tattcgccat gcctgcggat gccaaaaaca aagacgaagc
    15541 ctatcagttc ctgaattacc tgctgcgccc ggatgtagta gcgcatattt ccgaccatgt
    15601 gttctatgcc aacgccaata aagcagccac gccgctggtg agtgcggaag tccgtgagaa
    15661 cccgggtatt tatcctccgg cggacgttcg tgcgaagcta ttcactctga aagtacagga
    15721 tccgaaaatc gaccgtgtgc gcacccgcgc gtggaccaaa gtgaagagcg gaaaataatc
    15781 cgcagcctta gatgccgggc gggcgcacca cacccgccgg caattcgcac catcatggtg
    15841 cgcttgcaca cattcaatgc cggagagcag ccgtgaatga cgctatccct cgcccgcagg
    15901 cgaaaacccg taaggcgctg acgccgctat tagaaatccg caacctcacc aaatcctacg
    15961 atggtcagca tgcggtcgat gatgtcagcc tgaccatcta caaaggtgaa atcttcgcgc
    16021 tgctgggcgc ttccggctgt ggcaagtcca cgcagctgcg tatgctggca ggttttgaac
    16081 aaccttctgc cgggcagata atgctcgatg gcgtcgattt gtcacaggtg ccgccttacc
    16141 tgcgccccat caatatgatg tttcagtctt acgcgctgtt tccgcatatg accgtggaac
    16201 agaacatcgc ttttggcctg aaacaggaca aactaccgaa agcggaaatt gccagtcggg
    16261 tccatgagat gctcggcctg gtgcacatgc aggagttcgc caaacgcaaa ccgcatcagc
    16321 tttccggtgg tcagcgacag cgtgtggcgc tggcccgaag ccttgccaag cgcccgaaac
    16381 tattactgct cgacgagccg atgggcgcgc tggataaaaa gctgcgtgac cggatgcagc
    16441 ttgaagtggt ggatattctg gagcgtgtcg gcgtgacctg tgtgatggtc actcacgatc
    16501 aggaagaggc gatgacgatg gcgggacgta tcgccattat gaatcgcggg aaatttgtcc
    16561 agattggcga gccagaagag atctacgaac atccaaccac ccgctacagt gctgaattta
    16621 tcggttcggt taatgtcttt gaaggtgtac tcaaagagcg tcatgaggat gggcttgtgc
    16681 tttattcgcc tgggctggtg catccactga aagtcgacgc ggatgcctcg gtggtcgata
    16741 acgtgccggt acatgtggcg ctgcgcccgg aaaaaatcat gctttgcgaa gagccgcccg
    16801 ccaatggttg taacttcgcg gtgggggagg tgatacacat tgcctatctc ggcgatcttt
    16861 cggtgtatca cgttcgtctg aaaagtgggc agatgattag cgcccagcta caaaacgccc
    16921 atcgtcatcg taaagggtta ccgacctggg gcgacgaagt gcgtttgtgc tgggaagtgg
    16981 acagctgtgt ggtgctgacg gtttaaggag caaagatgaa tacacttgaa cctgctgccc
    17041 agtcgaaacc gccgggcgga tttaagctgt ggttgtcgca gctgcaaatg aagcatgggc
    17101 gcaaactggt cattgcgttg ccatatatct ggttgatctt gctgtttctg ctgccatttc
    17161 tgattgtctt taaaataagc ctggcggaga tggcgcgcgc tattccacct tataccgaac
    17221 tgatggagtg ggctgacggg caactgtcca tcactcttaa tctcggtaat tttctgcaac
    17281 tgaccgacga tccgctctat ttcgatgctt atctccagtc gctacaggtg gctgcgattt
    17341 cgacattttg ctgtttactg atcggctatc cgctggcgtg ggcggtggcg cacagtaagc
    17401 cttcgacccg taatatttta ttactactgg tgatcctgcc gtcgtggacc tcgtttctga
    17461 tccgcgttta tgcctggatg ggaatattaa aaaacaacgg tgtgctgaat aattttctgc
    17521 tgtggctggg ggttatcgat caaccgctga ccattcttca taccaatctg gcagtttata
    17581 ttggcattgt ttacgcctac gtgccgttta tggtgctgcc gatttatacc gcgttgattc
    17641 gtattgatta ttcgctagtg gaagcagcgc tggatctcgg tgcacgaccg ctgaaaacgt
    17701 tctttactgt gatcgtgccg ctgactaaag gtgggattat tgccggatcg atgctggtgt
    17761 ttatcccggc tgtgggcgag tttgtgatcc cggaactgct cggtggcccg gacagcatca
    17821 tgatcgggcg cgtgctatgg caagagtttt tcaataaccg cgactggccg gtggccgcgg
    17881 cggtagcgat catcatgttg ctgctgctaa ttgtgccgat aatgtggttc cacaaacacc
    17941 agcaaaaaag cgtgggagaa cacggatgaa taatttaccg gtagttcgtt cgccctggcg
    18001 gattgtgatt ttgctgctgg gctttacctt tctctacgcg ccaatgctga tgctggttat
    18061 ctattcgttt aacagctcga agctggtgac ggtgtgggcc ggctggtcaa cgcgctggta
    18121 tggtgagtta ttgcgcgatg acgcgatgat gagtgcggtt ggtttaagcc tgacaattgc
    18181 tgcctgtgcg gcaacggcgg cggcgatcct cgggactatt gcggcggtgg tgctggtgcg
    18241 ctttggcagg tttcgcggat caaatggctt tgcctttatg atcacagcgc cgctggtaat
    18301 gccagatgtc atcacgggct tgtcgctgtt gttattattc gtcgcgcttg ctcatgccat
    18361 tggctggcct gcggaccgcg gtatgcttac catctggctg gcgcatgtca ctttctgtac
    18421 ggcttatgtg gcggtcgtta tttcgtcgcg tctgcgggaa ctggatcgct cgatagaaga
    18481 agcagcgatg gatctcggtg cgacgccgct gaaagtgttt ttcgtcatta cgctaccgat
    18541 gatcatgcct gcgatcattt ctggctggtt actggctttt actttgtcgc ttgatgatct
    18601 ggtgatcgcc agctttgttt ccgggccggg agccaccacg ttaccgatgc tggtcttttc
    18661 cagcgtgcgg atgggggtga atccggaaat caacgccctt gcaacgttaa ttctcggtgc
    18721 ggtcggaatt gtcggattta tcgcctggta tctgatggct cgcgcagaaa aacagcggat
    18781 acgcgatatc cagcgtgcaa gacatggctg aagacactaa aatttgccaa cctggctaca
    18841 taatgccgcg catgccgcgg cattgttttc atggaagacg aaacgttggg attttttaag
    18901 aaaacatctt catctcatgc tcgcctgaat gtgcctgcgc tggtgcaggt agcggcgctc
    18961 gccattatta tgatccgtgg cctcgacgtg ctgatgattt tcaatacgct gggcgtgcgc
    19021 ggtattggcg agttcattca tcgcagcgta caaacctgga gcttaacgct ggtattttta
    19081 agcagtctgg tgctggtttt tatcgagatc tggtgtgcgt tttcactggt gaaagggcgt
    19141 cgctgggcgc gctggctata tctgctgaca caaatcaccg ccgcaagtta cttgtgggcg
    19201 gcttcgctgg ggtatggtta tccggagctg ttcagcattc ccggtgaatc aaaacgtgaa
    19261 atcttccata gcctgatgct gcagaagctg ccggatatgc tcatcctgat gctgctgttc
    19321 gttccctcga ccagtcggcg gttcttccag ttgcaataat gtgtataatc gtcgcccctg
    19381 atgatgtgaa ggtcaatgta tgcagtgcgc actttacgac gcgggtcgct gtcgttcctg
    19441 tcagtggata acgcagccga ttccagagca actctccgct aaaaccgccg atcttaaaaa
    19501 tctgctcgcc gattttccgg ttgaggaatg gtgcgcgccg gtgtcaggcc cggaacaagg
    19561 gtttcgtaat aaagccaaaa tggtggtgag tggtagcgtt gaaaaaccac tgctcggtat
    19621 gctgcatcgc gatggcacgc cggaagacct ttgtgactgc ccgctttatc ctgcctcttt
    19681 tgcgcccgtt tttgcggcgc taaaaccgtt tatcgcccgt gcggggttaa cgccctacaa
    19741 cgtggcgcgt aagcgtggcg aactgaaata cattctgctg actgaaagcc agagcgatgg
    19801 cggcatgatg ctgcgctttg tactgcgttc tgaaaccaaa ctggcacaac tgcgtaaggc
    19861 gctgccgtgg ttacaggaac aactaccgca actgaaagtt attaccgtca atattcagcc
    19921 ggtacatatg gcgattatgg aaggggagac ggagatctac ctgactgaac aacaggcgct
    19981 ggcagagcgt tttaatgacg taccgctgtg gatccgtccg caaagtttct tccagactaa
    20041 tccggcggtc gccagccagc tgtacgctac cgcgcgcgac tgggtacggc agctgccagt
    20101 taaacatatg tgggatctgt tctgcggtgt ggggggcttt ggtttacact gcgcgacgcc
    20161 tgacatgcag ttaaccggga tcgaaattgc gccagaggcc attgcctgtg caaagcagtc
    20221 agccgctgaa ctgggcttaa ctcgtttaca atttcaggcg ctggactcca ctcagtttgc
    20281 cactgctcag ggggaggtgc cggagctggt gctggttaac ccgccgcgcc gcggcattgg
    20341 taaaccgctg tgtgattatc tctcaacgat ggcaccgcgt tttatcatct actccagctg
    20401 taacgcccaa actatggcga aagatatccg cgaactgcct gggtttcgca tcgaacgggt
    20461 acagcttttt gatatgttcc cgcacaccgc gcactatgaa gtgctgacgc tgctggtgaa
    20521 gcaataaaaa agccgcaggt gcggcttcag attgctgatc aggtgcgctt tgttcatgcc
    20581 ggatgcggcg tgtacgcctt atccggccta caaaatcatg ctaaatcaat acattgcaga
    20641 gttgatgtgg gccagataag cgcagcgcat caggcaatct tacttttgtc atcagtctca
    20701 attactgcgg gaaccactgg tcattgattt tctgatatgt accgtcagct ttaattgctg
    20761 ccagcgcgtt attcagtttt tccagcagag ctttgttatc cggacgtaca gcgatgccca
    20821 gaccggtgcc gaagtattgc ggatcggtca ctttttcagt agcaacgccc agttgcggat
    20881 tggttttcag ccattcgttt accaccgctg tgtcaccaaa taccccatca atacgaccat
    20941 ttttcagatc gataaaggca ttctgataac tgtcatagga gacagttttc acttcggggt
    21001 gctgatcctg aatatatttc tggtgcgtgg tgccgttttc catcccaata cgtttgcctt
    21061 tcagatcggc aaacgttttg taggtatctt ttttggcaat cacgacggct gagttttcat
    21121 agtagggcgt ggtaaacgat acctgcttgc tacgctcggg cgtgatatcc ataccggaga
    21181 ttacggcgtc atattttctg aatttcagtg acgggatcag gctgtcgaac gcgtgattag
    21241 taaaagtaca ttctgcctgc atttgtttgc acaaggcttt tgccagatcg atatcaaagc
    21301 cgacaatctc attattagca cctatagatt caaagggtgg ataggtggct gaaacgccaa
    21361 aattgatttt ctctgcggca gaagcaccga aagtaaagga agcaagtaaa gcggcaagaa
    21421 ctaacttttt catgatggaa ctcccgtctg tcaatcttat gatttttggc cgtgtctgcg
    21481 gcatgggata acaatgccat caagtgaatt tatatgcaat aaatatgatt aaataattta
    21541 aatgaaataa aaaacgacgg ataacttagt gagttgtccg tcttcattat aagaatttat
    21601 gcactatgta ggccggataa ggcgtccacg ccgcatccgg cacaggcacc gtgctgatgt
    21661 ctgatgcgac gctggcgcgt cttatcagac ctacaaaccc cccggcgaat gtacgcagct
    21721 acattaattc cgccgttcga atgccagtgc tttgcgctcg atcagacgca tcatcagcgt
    21781 cagcaggccg ttgacgacca ggtaaataat ccctgccgca ccgaacacca ttacatcgta
    21841 ggtgcgtccg tacaacaact ggctgtatcc catcacttcc atcagcgtaa tggtgtaagc
    21901 cagagaggta cttttgaaca ccagcaccac ttcgttggaa taagaagaga gcgagcgttt
    21961 aaaggcatac ggcagcagga tcgccagcgt atcttttttg ctcattccca gggcgctaca
    22021 ggactgccac tgaccttctg ggatcgcacg aattgcaccg taaaacagct gcgtggtata
    22081 cgccgcactg ttcagcgata acgcaatcag cgcacataac cacggttctg acaacaaatg
    22141 ccacagtgcc ggatactcct gcaaagtcgg aaactggccc ggcccgtaat aaatcaggaa
    22201 gatctgcacc agcagcggcg taccggtaaa cagcgtgata taaccccgca ccagccacac
    22261 cagcaccggc gttttcagcg tcaggatgat ggtaaaaatc aatgccagaa tcagtgccac
    22321 aatcagcgag gcaacggtta gcgtcaggct ggtgtgtagc cctttcatca gttcgggtaa
    22381 atactcaaac attagctggg cctccgctca aaacgtgtcg cgcgcaggtc aatgcgtttg
    22441 agaatgtact gactgagcag ggtgatcacc aggtaaatcg ccgccgccac aatataccag
    22501 gtaaatggtt cctgggtacg agtagcgatg ctttttgttt gcagcattaa atcattcaca
    22561 ctaatcaaac tgaccagcgc ggtatctttc agcagcacca gccactggtt accgaggcca
    22621 ggcagcgcat gacgccacat ctgcggcatc accagacgga aaaagatagc cgatttcgac
    22681 agccccagcg cctgaccaga ctcccactga cccaccggca ccgctttcaa cgcgccccga
    22741 agcgtttgcg aggcataggc ggcatacagc agtgacagag cgatgacacc acaaaggaac
    22801 gggctaacgt cgaagttctc aatgtccatc tgcactggga tctgcacgaa cccaagattg
    22861 atagtgaagc catccgaaag cgtcagcagc agctgcgagg agccaaaata gataaacagc
    22921 accaccagaa tttctggcag gccacgcaga atggttacca gcgctgaacc tgcccacgcg
    22981 acaggacgcc atttttccga ctcccatacc gcaaagaaca tcgccagcgc cagcccgaca
    23041 atcaatgcac aaacggcaag gccgacggtc atcccggcgg cgcttgctaa aggaaaaaat
    23101 tcattcatca ggaattactt ctggaaccat ttgttgtaga tggtttcgta agtgccatct
    23161 ttcttcactt tttccagcgc agtgttgagt ttctgctgca gctcagtgtt gccctgacgt
    23221 accgcgatgc cgaggccagt gccgaagtaa tctttatcgg tcactttgtc gcccaccgcc
    23281 gccagtttcg ggttatcttt cagccactca gtgaccactg cggtgtcacc gaagacgccg
    23341 tcgatacgcc cgttttgcag atccagtttt gcgttctggt agctgtcata cggaacggta
    23401 gtgatttccg ggtgcttatc cataatgaat ttctggtgtg tcgtcccgtt ctgtacgccg
    23461 acttttttgc ctttcagctg atcaacactg gtgtatttgc cttgctgacc cacaaacagg
    23521 gcagagttgt catagtacgg ggtggtaaac agcacctgct tttcacgctc cggagtgata
    23581 tccatgcccg ccatcacggc ttctacgcga cggaatttca ggcttgggat caggctgtca
    23641 aacgcctggt tagagaaagt gcaggttgca tcaatctctt tacacagcgc ttgtgccagg
    23701 tcgacgtcaa aaccaacgat ctggttgttt gcatcaatcg attcaaacgg aggataggat
    23761 gcttcggtag caaaacgaat ggtttcggca gctgtggcgg aaagactaaa acctgcaatt
    23821 aacgcggcaa tcagaacttt tttcattgtt gttatcccga atcttagtga gagagatagt
    23881 ttttaaatgc ttcggtttgc ggctcggtaa agcagctcgc gtcgccttgt tctacgatat
    23941 gaccattttc catatacacc actcggctgg cggttttacg cgccacttca acttcgtggg
    24001 tgacgatcac ctgggtaata ttcgtttctg ccagctcacg aatgatgctg acgatttgtg
    24061 ccgtaatttc cgggtccagt gcggcggtcg gttcatcgaa cagcagtacc tgcggttcca
    24121 tcatcaacgc acgggcaata gcaacacgct gctgctgacc accagaaaga tgcagcgggt
    24181 aacgatcgct ataaggtttg agacgcagac gttccagcag tttttctgca cgggccagcg
    24241 cctgatcttt actcaacccc agtacacggc agggcgcttc aatcaggttt tgctgcacgg
    24301 tcagatgcgg ccacaggttg tattgctgaa acaccatgcc aacgttacga cgcaaatcgc
    24361 gaatcgcttt gtcagagggg gttttggtga aatcgaaatg gttgcctgca atgttgagcg
    24421 taccggagcg cggcatctca agcagattga gtacacgcag cagcgagctt ttacccgcgc
    24481 cgctggggcc aagtaacacc agcgtttcgc cctgtgggca atccagcgtg atatcgaaca
    24541 gcgcctgatg cgcgccgtag aagcaattaa tgccgtttaa ttgaatactc attgacactc
    24601 gtatactggc agtctgatag ctattgaggt cgaagatagt acctttgaca gaataattat
    24661 gcaatatttc tgctttaaaa gttaaaagca aagcgcatta ttcaataaac atagcacaaa
    24721 ataacggggg cggtggtcgg cgagcataaa tgtcggcatt cctcacgaaa tgccggacaa
    24781 tttacggggt ttattggttg atcaaggcgt tagcgattct cgatggactg acggagcgta
    24841 cccgccgtgg catgaacgct gccgcctaag tagcgtacat cgtcgatcac ccaacactgg
    24901 ccttcctgaa tcattaacac ttcatcctgc cagctctgat caccctgttt tagatccaca
    24961 cgcagaggaa tatttcgcgc atcacgattc gggattgttg aggcactggc aacacgggcg
    25021 ctctctggca aggttgtgcg actggagaat ggatcgttgg tcagtagttc ccgatggtta
    25081 ttatcccggg aggcatcgct aagcagtgtc gccagtttgt cgctcagata agggcgcaag
    25141 gcggtgatgt cgttgctgcg gtgcaaaatg cggtagtcat aaaattgctg ggccacgtta
    25201 cccgggcctc cttcaacgca aggaccactg cgtgtgccgt tatctttata agctggagtg
    25261 actgtggtgc aggcactgag gagcagtgcg caggggataa gcattgtcaa tttgctgtag
    25321 cgcataatga tttccttata agcgatcgct ctgaaagcgt tctacgataa taatgatatc
    25381 ctttcaataa tagcgtatca gtctgataat gcttttgaga tcgaaggctt agcaaacaag
    25441 gagatcgatc atgcaatttt ctacaacccc aactctggaa ggccagacca tcgttgaata
    25501 ttgcggtgtg gtgaccggcg aagcgatttt aggtgccaat attttccgtg atttctttgc
    25561 cggtatccgc gatatcgttg gcggacgttc cggtgcgtat gaaaaagaac tgcgtaaagc
    25621 acgggagatc gcctttgagg aattaggctc ccaggcgcgg gcgctggggg ccgatgccgt
    25681 cgtcggtatt gatatcgact acgaaacggt cgggcaaaac ggcagtatgc tgatggttag
    25741 cgtcagcggt acggcggtga aaacgcgtcg atgagaagag tcttctggct ggtcgctgcc
    25801 gctctgttat tggcagggtg tgcaggcgaa aaaggcattg tcgagaaaga gggatatcag
    25861 cttgataccc gacgccaggc gcaggcggcg tatccgcgca ttaaagtgct ggtgatccac
    25921 tacaccgcag atgattttga tagctcgctg gcgacactga ccgataagca ggtcagctcg
    25981 cattatctgg tccctgcggt accaccgcga tacaacggta aaccgcgcat ctggcaactg
    26041 gtgccggaac aagaactggc ctggcatgcg gggattagcg cctggcgcgg ggcaacgcgc
    26101 cttaacgaca cctctattgg cattgagctg gaaaaccgtg gctggcaaaa atcggccgga
    26161 gtgaaatatt ttgccccgtt tgaaccggca cagattcagg cgcttattcc actggcgaaa
    26221 gatattattg cccgttatca catcaagccg gaaaacgtag tggcacatgc ggatatcgca
    26281 ccgcagcgca aagacgatcc ggggccatta tttccctggc agcaactggc gcagcagggg
    26341 attggtgcct ggccggatgc gcagcgggtt aacttttacc ttgccgggcg cgcgccgcac
    26401 acaccggtag ataccgcgtc attgctggag cttttggcgc gctacggtta tgacgttaaa
    26461 cctgatatga caccgcgcga gcagcggcgc gtgattatgg cattccagat gcatttccgc
    26521 ccgacgttat ataacggcga agcggatgca gaaactcagg cgattgccga agcattgctg
    26581 gagaaatacg ggcaggatta gcgcggcagt tttccgtggt cgcgtagcca ggcggcagtt
    26641 ttctcgatac cttcatccag ggtgatgacc ggctgataac ctaactcttc ctgcgcacgc
    26701 gtaatatcca gcgtaaagtc aaaattcaac ttggagacgc cgtagtgggt cagcggcggc
    26761 tcttttgctg acttgcggaa acgctccatg ctgcgggcga tcatatccag catcgggtag
    26821 gggacggaac gaatacgaca gtcaatattc aactcgtcga tcagcttctg cacgatgctg
    26881 cacagtgtgc gatgctcgcc gttggtgatg ttgtacacac gcccggaagg tagcttatcg
    26941 caggcttcct ggcttgccag ccacattgcg tgcacggcat tttcatagta ggtcatatcg
    27001 accagcgcac tgccgccatg cggtaacaga atactgccgt agtggtgcat catatgcgcc
    27061 agacggggaa taaagacttt atcgtgcggt ccgaacagac tttgtgggcg cagaatagta
    27121 aagcgcgttt gtggattcgc ctgcgaaaac atattgatca cttcttcgct ggctgctttg
    27181 ctgcgggcaa actcgttggc gaagcggtga gggcgaaaat cttctttaat atcgcgatgg
    27241 tggtgataat cgaagtacag ggagggggaa gagatatgaa taaagttacg cacaccccag
    27301 gcgacagccc attcacccag gcggcgagtg gcgcgaacgt tagccagatc gaaagcctgt
    27361 tgtgtccccc agggtgaggt aaagctggag cagtgccaca gcgtatcaat gcccgcgagc
    27421 atcactttag cttgtgatga aaccagctcg gtcagatccg ccggaacaaa ctctgcgccc
    27481 attttttcca gcaatttgcc cattgcctcg ttgcgaccgg tcgctcgcac gctgatgcct
    27541 ttctggcata aaaactctac cgcgtttcga cctaagccgc tggtggcgcc ggtaaccagt
    27601 accttcatat caatccactg ttgttgagaa aataacgtgc gcattcttcc gtgatttccc
    27661 ccatgatgca atgggaaaca tgaaagaata acgcaggttt tgtcgattaa tctgtgcttt
    27721 gttctgccag tctggcgatt tgttttgcca ttccgcgaaa aataaacaga tgcgcgggga
    27781 tcatcaataa ccagtaaaac agccccggca taccgtgcgg atgccagaaa gcgcggacat
    27841 cgatagtacg atagtcgcct ttatcttcca ggctaaaaca cagtcgtccc agccccggcg
    27901 ctttcatgcc aaataacaac gtaagttgtt tttccggttc aacgacaatc actttccagc
    27961 tatctaccgc atcgccagtc tgtaaatatt cgcgctccgg gcggcctttc gccagcttat
    28021 gaccgatcgc gcggtccatc aacgcccgtg tctgccacaa aatattgcca aagaaataac
    28081 gctctttacc gccgatttgg ttcactacct gccataaagc agcaaggctg gcggacgttt
    28141 taacggtaaa ccccgcctgt ttggcaaaat aaccgtactc cggtcgccag cgggcaaagg
    28201 cctgagcgtc gtagccccag tcgctggagt tgaccagttt ttcctcctct ttcaacgtgc
    28261 tacgtactgc gtcatcgaaa gcgatcagcc gttgtgggat gagtgcacgt agcgcggtat
    28321 catccgccag cagatcgtgt ttcagcccct gaatcaacgc cctggcggtg gtgggcggta
    28381 cggaagtaat cacattgaga aaccacaccg aaatccagcg ggtggggagg gggatgggga
    28441 tcaaccagcg gcgcttgccg ctcaccgcca taaaatgttc aaactgttgc tgataactga
    28501 gcacctctgg tccggcggct tcgaagatgc ggtgttcgct ggccggatga tctaacaacg
    28561 ccaccagata gtgcagcaag ttttccagcg cgatgggcgt ggtgcgtgaa cgtacccagc
    28621 gtggcggcgt taacactggc aggttgtaga ccatatcgcg catgacttcg aacgccgctg
    28681 aacctgcgcc aacgataatt ccggctcgaa gttcggtcac aggtacattc gcttcacgaa
    28741 gaatgtccgc cgtagcctga cgagcacgca gatgatccga ctgctcatgt ggcggggcct
    28801 gcaacgaact gagaaagatt aattgcttaa ctggtacttc acgtagcgca tcgcggacgt
    28861 tgagagccac ctggcgctcc tgagcgataa aatcgccgcc ttcgcccatg ctgtgcacca
    28921 gaaaatagac ggtatcgata tcctgcaaca gggccggaag gttatccggc cagctgagat
    28981 cgactttatg gcaactgacg tttgccagtt gcagctttgc aagcctgtcg acatgacgtg
    29041 ccgccgccag gatctgatgc ccttgctggc tgagtgtgcg caccagatgc tgaccaatgt
    29101 agccactggc accgagaact aaaatgcgtt gcggcacgtc tctctcctta acgcgccagg
    29161 aatgcgcgcc agtgggcggc gacttccgcc agttgttcgc gcgagacgtc aagatgcgtc
    29221 accaggcgga caatcggcga ggcgttaatc agcacgtttc tcactttcat gtattcgcct
    29281 aacgcggcag cattttcttc cccgacgcga acaaacagca tattagtgtc ctgacgcatc
    29341 acatccgcgc ctgcttcacg cagttgctcc gccatccagg cggcgttgtc gtgatcttcc
    29401 tgcaaccgtg cgacgttatt tttcagggca tacatcccgg cggcagccag aatcccggac
    29461 tgacgcatcc cgccaccggc cattttccgc cagcggatgg cacgtttaat gtaatcacga
    29521 ttaccgacga gtaatgaacc gacaggcgtc ccaagacctt tcgacaggca aatggtgaac
    29581 gaatcacaat attgcgtgat ctctttcagt tcgcagccgt aagccaccac ggcattaaag
    29641 atgcgcgcac cgtcaacatg cagcgccaga ttgcgctcgc gggtaaattc ccatgcttct
    29701 ttcaggtatt cacgcggcag cactttgccg ttgtgggtgt tttccagact gagtaatttg
    29761 gtgcgggcga aatggatatc gtcgggtttg attttcatcg ccactttatc cagcggtagc
    29821 gtgccgtcgg cagccgcgtc gatgggttgc ggctgaatac tgcccagcac cgctgcgcca
    29881 ccggcttcaa acagatagtt atgcgcggcc tgaccgacaa tatactcttc gccacgttcg
    29941 cagtgactga gcagagcgac caggttggcc tgagtgccgg taggcagaaa aatggcggct
    30001 tctttaccgg aaagctctgc tgcatagtcc tgcagagcat taacggtagg gtcgtctccg
    30061 taaacgtcgt ccccaaccgg ggcggccatc atcgcttcga gcatggcgcg gctcggtcgg
    30121 gtaacggtat cactgcgtaa atcaatcatg gcatgtcctt attatgacgg gaaatgccac
    30181 cctttttacc ttagccagtt cgttttcgcc agttcgatca cttcatcgcc gcgtccgctg
    30241 atgattgcgc gcaacatata caagctaaat cctttggcct gttcgagttt gatctgcggt
    30301 ggaatggcta actcttcttt ggcgaccacc acatccacca gcaccggacc gtcgatggag
    30361 aaggcgcgtt gcagggcttc atcaacttca gacgcttttt ctacacggat acccgtaatg
    30421 ccgcacgctt cggcaatgcg ggcaaagttt gtgtcgtgta gttcggtgcc gtcagtcaaa
    30481 tagccaccag ctttcatctc catcgccaca aagcccagca cgctgttgtt aaagacgaca
    30541 attttcactg gcagtttcat ctgcactact gagaggaaat cgcccatcaa catgctaaaa
    30601 ccgccatcgc cgcacatggc gaccacctga cgttctggct ctgtcgcctg cgcacccagc
    30661 gcctgcggca tggcgttagc catcgaaccg tggttaaacg aacctaacag gcgacgcttg
    30721 ccgttcattt ttagataacg tgccgcccac accgttggcg taccaacgtc acaggtgaaa
    30781 atagcgtcat cggcggcaaa atgactaatt tgctgcgcca gatattgcgg gtgaatggct
    30841 ttctcgctcg gtttagctaa atcgtccagc cctttgcggg cgtcgcggta atcttccagc
    30901 gctttatcca gaaacttgcg atcggctttt tcttccacca atggaagcaa tgcacgcaga
    30961 gtcgacttga tatcgccgac cagtgccata tccaccttgc tgtgagcgcc gatgctggct
    31021 gggttgatat caatctgaat gattttggca tcggtcgggt agaaggcgcg gtagggaaat
    31081 tgcgtgccga gtagcactaa cgtgtcggcg ttcatcatgg tatggaaacc tgacgagaag
    31141 ccgattaacc cggtcattcc aacatcatac ggattatcgt attcgacatg ttctttaccg
    31201 cgcagggcat gaacaatagg cgctttaatt ttcccggcaa actcaactaa ctctttatgc
    31261 gcccccgcgc agccgctgcc acacatcagg gcgatattgc tggaataacg cagcagttgc
    31321 gccagtttgc gtaactcttc ttcttccggc gtcacgactg gttgtggcgc atgataccag
    31381 tgcgtggttg ccccttctgg cgcaggtttt aacgccacgt cgcctggtaa cacgacaacc
    31441 gaaacgccac ggttaagcac cgctttgcgc atggcaatcg ccagtacttg tgggatctgc
    31501 tccgggctgg aaaccagctc gcaatagtga ctacattcgc ggaatagctc ttgtgggtgg
    31561 gtttcctgga aatagccgct gccaatttcg ctggagggaa tatgagcggc aatcgccagt
    31621 accggaacgt gattgcggtg gcaatcaaac aggccgttga ttaagtgcag gttgccgggg
    31681 ccgcacgatc cggcgcagac cgccagttct ccgctaagtt gtgcttcagc gccagcggca
    31741 aaggccgcca cttcttcgtg gcgggtggac atccactcga tggtgcccat gcgattaaga
    31801 ctgtcactaa gaccattcag agagtcgcct gtgactcccc agatgcgttt cacccctgcc
    31861 gattcgagtg ttttggcgat ataagctgca accgtttgtt tcatggttct ccatctcctg
    31921 aatgtgataa cggtaacaag tttagttcat ctgacggagg gggaagggat gggagagaaa
    31981 ggaggcacta acggttaaat agcccgatga aaggaatatc atcgggcata aggcgattat
    32041 gcgagaacca aatccccctg cggatggcag gagcaggcca gtacgtaacc ttcagcgatt
    32101 tcggcgtcgg tcagcgtcat tgtactgctc accgtatatt caccggaaac cacttttgtc
    32161 ttacagcagc cgcaaacacc cgcacggcag gcagcgacaa ccggaacgtt attgctttcc
    32221 agcgcctcca gtagtgtggt gccaaccggg gcgtaaaatt ctcgtgccgg ttgcagtttg
    32281 gtgaatttca gaccgctggt cgccgctttt gctactgggg tgaagaattt ctctttaaag
    32341 aaacgcgtca cgccgagcgc tttcacttcc tgctctaccc aatccatata cggagccggg
    32401 ccgcaggtca tcacggtacg tgaagctaag tcaggtacac ctgccagcag ttctcgagtg
    32461 agacgaccag cgataaagcc ttcggtaacg ttattttctg ccaccagcgt taccggatag
    32521 ttacgccact catcggcgaa aataacatcc tgcggcgtat gcacgttgta gatcacccgc
    32581 acatcggcct gtggacggtt cttcgcaagc cagcgacgca tcgacataat cggcgtgacg
    32641 ccgcagcctg ccgccagcaa caggaattta tcttctgctt tatcgtcgca ggtaaattcc
    32701 cccatcgcgt ccgaaagcca gagataatca ccgcgtttta catcgcgcgt cagccactgg
    32761 gagccgacac cgtcatcaat ccgccgcacg gtcagggtga tatattcact cacgcctggc
    32821 gtggaggaaa tggtgtaagc acgcagcgtt tccgctgagt ttcgcacgct gaccagtgca
    32881 tattgcccgg cgcgatatgg gtagtaatcg tggcaaatca gggaaatcgt ccacacatcc
    32941 ggcgtttctt gcgtaatgtg atgaacctgc atccgccacg ggcattgatt cgttggcatc
    33001 gtcatcgaca aactccttac gcgctcaaca gttgcttcat gtcttcttca acagtggtga
    33061 tagaacgcag gccgaatttc tcgttcagca ccgccagcag gtctggtgtc aggaaaccag
    33121 gtgcagtcgg gccggtgacg atatttttca cgcccagaga aagcagcgtc agcagaatga
    33181 cgatcgcttt ctgttcaaac caggagagca ccagcgacag cggcagatcg ttcacaccac
    33241 agcccagttt ctctgccaga gtgacagcca gaataatcgc tgagtaagca tcgttacatt
    33301 gacctgcatc taccagacgc ggcagacctt cgatatcgcc aaactcaagt ttgttaaagc
    33361 gatatttacc acaggcgagg gtcaggatca ggcagtcatc cggcacgatg gtggcgaaat
    33421 cggtgaagta gtggcgctcg ccgcgtgcgc cgtcacagcc accaagcagg aagatatgac
    33481 gcagtttttc acggctcacc agatcaatca gcgtatcagc agcgccaagc agcgtctggc
    33541 gaccaaaacc cacggtgata aggtgcggaa tttcgctgta cgggaagcct gccatctgtt
    33601 gcgcctgggt gataaccgca gagaaatcat caccgtccag atgacgcacg ctaggccagc
    33661 caacaatgct gcgggtccag atacgatcgt cataagcgct tacggttggg tcgatgatgc
    33721 agttcgaggt catcacgatg gggccaggga aacgagcgaa ctccacttgc tgattctgcc
    33781 agccgctgcc gtagttaccg accagatgct tgaatttacg cagctccggg tagccatgcg
    33841 caggcagcat ttcgccgtgg gtgtagacat taacgcccgt gccttcggtc tgttccagca
    33901 ggttgtagag atctttgaga tcgtgaccgg aaatcagaat gcatttaccc gccgtcgctt
    33961 tgacgttgac ctgggttggc gtcgggtgac cgtatttacc ggtttcgcct gcatccagaa
    34021 tgctcatcac tttgaagttc atctggccga tttccattga acactcaaga agcgcgttca
    34081 tatcggcagg ccaggtcccc agccacgcca tgattttatg gtactgggca taaatatcgt
    34141 tgtcgtattg accgagaaca tgcgcgtgtt ccatataggc cgccgcacct ttcaggccat
    34201 acaggcacag cagacgcagg ccgagaatgt tttcgccaat cgccgcttta tctttgttag
    34261 gggtaaattc tgctgcctga cgttgcagct cgccgagatc atcgctcacc agttgcaggt
    34321 cagccatcgg gttatcgacg cgcgcgttgg catctacagc caggcattgt gctttcagcg
    34381 cctcgcgcaa ggcaatcgct tcacgagcgt agccgacaat acgcggagaa tcgaagttaa
    34441 cgttggtcag ggttgagaaa aaggcacgtg gcgcgaagct gtcaacatcg tggttgatga
    34501 tgccgtattc acgcgctttt accgcccagg cagaaagccc ttgcagcgcc gcgatgagta
    34561 aatcctgaag gtcagaagtt tccgccgttt taccacacat cccctgcgcg tatgagcagc
    34621 cgtttcctgc cggagtacgg atagtttgtt cacattgcac acaaaacatg atcacacctt
    34681 ttaaagttat atttaatata catgtttaag gttaagacgc ttaacgcggg gataaaaggg
    34741 atttttcatg caactttaag ggagattgat ttagcgcaat tttggcggca gggatctacc
    34801 gccagagagg tattacgcag agaaaaaggc gatgaggatc ggcactaaca ggctaagaat
    34861 aaaaccgtga acaattgccg ccgggaccat atccagcccg ccagtacgtt gaagaacggg
    34921 cagggtgaaa tccattgatg tggcaccgca taagcccagt gcagtagagc ggctgcggcg
    34981 aatcagccca gggatcaaca taatagcaat cagttcacgg gccagatcat taaaaaacgc
    35041 cgcgctcccg attaccggac caaaagattc ggtcaataaa ataccggaaa gagaatacca
    35101 gccgaaaccg gaggccattg ccagcgcggt attgatgggg agatcaagaa taaaggcgtt
    35161 aattaaacca ccaattaatg aactgacaac caccaccacg gcgacaatca ttccccggcg
    35221 attaaggaca atctgcttta aggtcatgcc attattgcgc aactgaatac caacgaggaa
    35281 aagtagcaaa attaacgtgt attcactggc ttcggtcgcg tgttgtaaga aagccagtcc
    35341 actcagacca atggcaaaac caatcactac tacgccgcac agttttagcg actccagcgc
    35401 catcgcaata cgcgacggga gtttttcttg ctgatggtgg ttgcgccacg gcaggcctcg
    35461 ctccagccac atcagggcgg caatattaca cagtaaaata acggtaatac tgacggcaga
    35521 ataatgcaga atcgccaaca ggttactggc gaggttatcg agaaacgcca gactgatacc
    35581 cataaaaaag agaataaggt aaaccatcca gcttaatagc tgattaataa cttttaacgc
    35641 agcttgttgg cgaagcggaa tgaggtaacc cacaatcagg ggaaccagaa tgattaacag
    35701 cccagaaaac atgaaaaccc agtccttgca aagatgaagt cgaaatgcgc gatgacacac
    35761 tactgaaagc ggaaggacga gtaaagttgc aattaaaagg aaatgttatg cataaggagc
    35821 agtagagtat tcgttttcat ttaaagatat tcttgcgctt taattacaaa ctgcaccgat
    35881 gttggtggcg tcaaaatcgc cgaggcgttc cctgaaggcc ggggcagccc acatggatgt
    35941 gggctgaggg cgcgttttac agggatgtta cctcgcgccc gacccggtag ccgtaaggga
    36001 taagtcgagg gcaccgcgca gcggcgattt tgttcgccag agcccggggg gggcaggggg
    36061 cggcggcgat tggccgcccc ctgcgcgctc cttgcgccag tggcaatatg tggcttagct
    36121 catgaaagga gcgcaacaag atgatgaatc aacatataac aacatcttaa aaaaagcctg
    36181 acattacgcc aggccttctg cgttaattaa tcacgctttt ccagcagggt ccggtaaatc
    36241 agaccaccga taatgccgcc gacaattggc accacccaga agaaccacag ttgttctaat
    36301 gcccagccgc cctggaagat agcaaccgcg gtgctgcgcg ccgggttaac agaagtgtta
    36361 gtcaccggaa tactaattaa gtgaatcagg gttaaggcca gaccaatagc gatcggcgca
    36421 aaacctgccg gcgcgaattt ggcggttgcg ccgtggatca ccaacaggaa acctgcactc
    36481 aataccagtt caactaccag cgcggaaagc atggaataac cgcctggtga atgctcgcca
    36541 taaccgttag aagcaaaacc gctggctgcc gcgtcaaaac ccgttttacc actggcaatt
    36601 aaatacagca gcgccgctgc aacaataccg ccgacaacct gggcaattac gtagccaacg
    36661 acttcttttg ccggaaaacg tccgccagcc cataaaccaa tagtgaccgc cgggttaaaa
    36721 tgaccaccag aaatatgacc aacagcaaag gccatcgtca gaacggtcag accgaacgcc
    36781 aacgccacgc cggcaaaacc aatgcctaat tccgggaagc ctgcggccag tacagcacta
    36841 ccacagccac caaaaacaag ccagaaagta ccaaaacatt cagctgctaa ttttctgaac
    36901 atatccacct caattaaaaa ttgaccctgt gaaaaatatg gtcgttttat agggtcgtcg
    36961 taaaaaaatg acgacggaaa taatgcgcgg ctattttaaa aacgaaggcg agtcattcac
    37021 cagataaata aatccagtaa atttgattta gggcaacagc gggttgcccc atatagtcat
    37081 ttgtctgatt gacagtgtag tgcacgcaaa agatttaatc ctttaggcgt aataaaaaat
    37141 aatatatcat gctaattatt tgattttgtt gtttttgcag acttatcagc aagagggagt
    37201 ataacgcgat tattcgctca tttttcagac atttgccatg cttaaatgtg atgtcatcac
    37261 gtattagcaa ggcctttccc gttatactgc cagcgtaaag gataagtcac atatttctgg
    37321 aggggatatg attcttgagc gcgttgaaat tgtgggtttt cgcggtatca accgtttgtc
    37381 gttgatgctg gaacaaaaca acgtcctgat tggggagaac gcgtggggta aatccagctt
    37441 gctggacgcc ttaaccctgc tgctatcgcc agaatcagat ctctaccatt ttgagcgcga
    37501 cgatttctgg ttcccgccgg gagatatcaa cgggcgagaa catcatctgc atattatttt
    37561 gaccttccgc gaatcgctgc caggccgaca tcgggttcgc cgttatcggc cgctggaagc
    37621 gtgctggacg ccatgcaccg atggctatca ccgtattttt tatcgtctgg aaggggagag
    37681 tgcggaagac ggcagcgtga tgacactgcg cagttttctc gataaagacg gacatccgat
    37741 tgatgtcgag gatattaacg atcaggcacg ccatctggtg cgtttaatgc cggtgctgcg
    37801 cttgcgtgat gcccgtttta tgcgccgtat tcgtaacggc acggtgccaa atgtccctaa
    37861 tgtggaagtc accgcgcgcc agctcgattt cctcgcccgt gagttatcct cacatccgca
    37921 aaatctctct gatgggcaga ttcgtcaggg actttccgca atggtacagc tgcttgagca
    37981 ttatttctct gagcaggggg ccggacaggc gcgatatcgt ttaatgcggc ggcgggccag
    38041 caatgagcaa cgaagctggc gctatctgga catcatcaac cggatgattg accgacctgg
    38101 agggcgctcg tatcgggtta ttttgctcgg cctgtttgct actttattgc aggcaaaagg
    38161 cacattgaga ctggataaag acgcgcgtcc attgttgctg atcgaagatc cagaaacccg
    38221 tttacacccc attatgcttt cagttgcctg gcatctgttg aatcttctgc cattgcagcg
    38281 cattgccacc accaactcgg gtgagttgct ttcgttaacg ccggtagagc atgtttgccg
    38341 actggtacgt gagtcctcgc gcgttgccgc ctggcgtctg gggccgagtg gcttgagtac
    38401 cgaagatagc cgacgcatat cctttcacat tcgttttaac cgtccgtcat cgctgtttgc
    38461 acgctgctgg ttgctggtgg aaggggaaac ggaaacctgg gttatcaatg aactggcgcg
    38521 tcagtgcgga catcattttg atgccgaagg gatcaaggtc attgagtttg cccagtccgg
    38581 gctaaagcca ctggttaaat ttgcccgccg aatggggatt gaatggcatg tactggtcga
    38641 tggcgatgaa gcagggaaga aatatgccgc tacggtacgc agcctgttga ataacgatcg
    38701 ggaagccgaa cgagaacatt taacggcgtt accggcgctg gatatggaac attttatgta
    38761 tcgccaggga ttttccgatg tgttccaccg cgtggcgcaa atcccggaaa atgtaccgat
    38821 gaatctacgc aaaattatct cgaaagcgat ccatcgctct tccaaacccg atcttgccat
    38881 tgaagtggca atagaggcag gacgtcgtgg tgtggactcc gtaccgacgc tgctgaaaaa
    38941 aatgttctca cgcgtgctgt ggctggcgcg cggtcgcgcg gattaaccgc gaaacatcgt
    39001 ggccatttgt ggctgaatag cgtcgagcat ctcatagcgc cgacggtatt cagcccgttt
    39061 tttactggcg atttcggcaa tctcttttcg tgctatctgt gctggaaggc ggtaatggcg
    39121 ttcagcatca catacgccgc caaccgattc ccagaaagcg ttgtaatcag cgtggatctt
    39181 gccttcttta tcgcgataac gcaggctgcg gtaaatatgc gtttcattgc tgacggcaat
    39241 aatctgctct acctgcaaac gttgggcaaa cagacaggcc gcttccatca cgaggcgttt
    39301 gggaaatagc ccgtggcagg ctttcgtcgc attctggatt tcctgatgtg gaatttccca
    39361 ttttgcgcct tgcagtccgc caataaacat cgttcttttc ccctgatatt cacacagggt
    39421 aaacgtgatc tctgccagag gaataccttc gctgttgcga aacaggattg tgctgtcacc
    39481 ttctttatcc attgagatca tcatggtcag cttaagcgtg aactgctcgc cgtttttgcc
    39541 ttccagcttc gccagttgca gcccgggggt attcaaatat aagctgaatt cttccgccga
    39601 catacatccg cggagtaacg cataatggta acgtaacgcc tccagcaatt gcttacggct
    39661 aagattcgcc gcaaggtaag ggcgatgcag acgcacaggc agtcgcggct ggcgcgttaa
    39721 caacacattg agattaggcc agtgggaaag ttcgttcatc cactcaacgc ttaaacgcgg
    39781 cataatcaac gagcgcagca aaaatttctg gcgaaaacta cggcgatgcc agaatttacc
    39841 cggccgacac tgtccacgtg ccagactaag aaaaagtgac aggctgctga gagattcaga
    39901 tggcgtaaag gtccgttcag ttagctgcga catattcatg aaatcattgg ttatacatga
    39961 cgtcgatttc accattgcgt atcttaacca aacatcaata gtgtgattac taacgtaaat
    40021 tttagggttt tgttgatatt tcgttgaagt taatgacccg gattggcata tggagtattc
    40081 agaatattta tgaaaaagcg gaaaaccgtg aagaagcgtt acgttattgc gctggtgata
    40141 gtcatcgccg gactgattac gttatggaga attcttaacg cacccgtgcc gacttatcag
    40201 acactgattg tgcgccccgg tgatttacag caaagcgtgc tggcgaccgg aaagctggac
    40261 gcgctgcgta aggttgatgt gggcgcgcag gtcagcggtc agttgaaaac tctgtcggtg
    40321 gcgattggcg ataaagtaaa aaaagaccag cttttagggg ttattgatcc tgaacaggct
    40381 gaaaaccaga ttaaggaggt cgaagcaacg ctgatggagc tacgtgcgca gcggcagcag
    40441 gcggaagcgg agctgaaact ggcgcgggtg acgtattccc gtcagcaacg tctggcacaa
    40501 acgcaggcgg tttcacagca ggatctcgac accgccgcga cggagatggc tgtgaaacag
    40561 gcgcaaattg gcaccattga cgcggaaatc aagcgcaatc aggcttctct cgatacggct
    40621 aaaaccaatc tcgattacac tcgcatcgtt gccccgatgg ccggggaagt cacgcaaatc
    40681 accactctgc aaggccagac ggtgattgcc gcacaacaag caccgaacat tctgacgctg
    40741 gcagatatga gcaccatgct ggtaaaagcg caggtttctg aagcggatgt aatccacctg
    40801 aagccggggc aaaaagcttg gtttacggtg cttggcgatc cactgacgcg ctacgagggg
    40861 caaatcaagg atgtactacc gacgccggaa aaggttaacg acgctatttt ctattacgcc
    40921 cgttttgaag tccccaaccc caatggtttg ctgcggctgg atatgactgc gcaagtgcat
    40981 attcagctca ccgatgtgaa aaatgtgctg acgatccctc tgtcggcgtt aggcgatccg
    41041 gttggcgata atcgttataa agtcaaattg ttgcgtaatg gtgaaacacg cgagcgtgaa
    41101 gtgacgattg gcgcacgtaa cgataccgat gttgagattg tcaaagggct ggaagcgggc
    41161 gatgaagtgg tgattggtga ggccaaacca ggagctgcac aatgacgcct ttgctcgaat
    41221 taaaggatat tcgtcgcagc tatcctgccg gtgatgagca ggttgaggtg ctgaagggca
    41281 tcaccctcga tatttatgcc ggtgagatgg tagcgattgt tggcgcttca ggttccggta
    41341 aatcgaccct gatgaatatt ctcggctgtc tggataaggc caccagcggc acctatcgcg
    41401 tcgccggtca ggatgttgcc acactggacg ccgatgcgct ggcgcaactg cgccgcgagc
    41461 atttcggctt tattttccag cgttaccatt tactttcgca tttaaccgcc gagcagaacg
    41521 ttgaagtacc cgccgtctat gccggtcttg agcggaaaca gcggctgctt cgcgcccagg
    41581 agttactgca acgactgggg ctggaagacc gtacagagta ttatccggca cagctttcgg
    41641 gtggtcagca acagcgcgtc agcatcgcgc gggcattgat gaacggcggt caggtaattc
    41701 ttgccgatga accaaccggc gcactggaca gccattctgg cgaagaggtg atggcgatcc
    41761 tgcatcagct gcgcgatcgc gggcatatgg tgattatcgt cacccacgat ccgcaggtcg
    41821 ctgctcaggc cgagcgggtg atcgaaattc gcgacggcga aattgtgcgc aatcctcccg
    41881 ccattgaaaa agtgaatgtt gctggcggga cggagcctgt tgtcaacacg gtgtctggct
    41941 ggcggcagtt tgtcagcggt tttaacgagg cgctgacgat ggcatggcgg gcgctggcag
    42001 cgaataaaat gcgtacttta ctgaccatgc tggggattat tatcggtatt gcgtcggtgg
    42061 tttccattgt cgtggtgggt gacgccgcca aacaaatggt gctggcggat attcgttcta
    42121 ttggtacgaa tactattgat gtctatcccg ggaaagattt tggcgatgac gatccgcaat
    42181 atcagcaggc gctgaagtac gacgacttaa tcgccatcca aaaacaaccg tgggtcgcct
    42241 cagccacacc tgccgtctcg caaaacctgc gcctgcgtta taacaatgtt gatgttgctg
    42301 ccagtgccaa tggcgtgagc ggcgattatt ttaatgtcta tggcatgacc ttcagtgaag
    42361 gaaacacctt taatcaggag cagctgaacg gtcgtgcgca ggtcgtggtt ctcgacagta
    42421 atactcgccg ccagcttttc ccccataaag cagatgtggt tggcgaggtg attctggtcg
    42481 gcaatatgcc cgccagagtc attggtgtgg cggaagaaaa acagtcgatg tttggtagca
    42541 gtaaagtgct gcgtgtctgg ctaccttaca gcacgatgtc cgggcgagtt atgggccagt
    42601 cgtggctgaa ctccattact gtcagggtaa aagaaggatt tgacagcgcc gaggcggaac
    42661 agcaactcac gcgtttactt tcactgcgcc acggaaagaa ggatttcttt acctggaaca
    42721 tggacggcgt cttgaaaact gttgaaaaga ccacacgtac tttacaactg tttctgacgc
    42781 tggtggcggt gatttcgctg gtggtgggcg gtattggtgt aatgaatatt atgctggtgt
    42841 cagtgaccga gcggacgcgg gaaattggca ttcgcatggc tgtaggtgcg cgagcaagcg
    42901 atgttttgca acagttcctg atcgaagccg tactggtttg cttggtcggt ggcgcgttgg
    42961 gaataacgct gtcactgtta attgctttca ccttgcagct tttcttaccc ggctgggaga
    43021 ttggtttttc accgttggca ctgctgctgg cgtttctctg ctcgacggcc accgggattt
    43081 tatttggatg gttacccgca cgaaatgcgg cacgactgga tccagtagat gctctggtac
    43141 gagagtaatt tttgagataa aaatgccagc cgatcgggct ggcattttgc ctttaggatg
    43201 tacacaatga gacagaagag ctatgcgact gccgcttcta cttcgacggg cacaataaca
    43261 ctggcgtgat tgccttttgg cccctggtgg acatcaaact gaacggattg tccagctttt
    43321 agcgttctgt aaccatccat ctgaatggtg gaataatgag cgaaaatatc ttcgccgccg
    43381 ccttcagggc agatgaaacc aaaccctttg gcattgttga accacttaac agtacccttt
    43441 tccatgcttc gacatccttc gcaaatctta tacaagtaag atggaataaa ccggggtcag
    43501 agagggggct gttcaaaacc tcgccaactc tagaaataca atttagagaa ttagggcgag
    43561 ccgtcaagcg tttgacaggg gccagggggc aggtatgaat caaaaatttg aagcagttaa
    43621 cgctattgac aggaatgtga cagatgtcgc tgatgccaac gatagatgat agttatctat
    43681 catgtggagt agattggtca ggcaaataag ctcttgtcag cggcagggcg ttctgccgat
    43741 aaccgtaacc gaagatgata actgacaatg ggtaaaacga acgactggct ggactttgat
    43801 caactggcgg aagaaaaagt tcgcgacgcg ctaaaaccgc catctatgta taaagtgata
    43861 ttagtcaatg atgattacac tccgatggag tttgttattg acgtgttaca aaaattcttt
    43921 tcttatgatg tagaacgtgc aacgcaattg atgctcgctg ttcactacca ggggaaggcc
    43981 atttgcggag tctttaccgc cgaggttgca gaaaccaaag tggcgatggt gaacaagtac
    44041 gcgagggaga atgagcatcc attgctgtgt acgctagaaa aagcctgaat gcaggcataa
    44101 aaattggggg aggtgcctat gctcaatcaa gaactggaac tcagtttaaa tatggctttc
    44161 gccagagcgc gcgagcaccg tcatgagttt atgaccgtcg agcacttgtt actggcgctg
    44221 ctcagtaacc catctgcccg ggaggcgctg gaagcgtgtt ctgtggattt ggttgcgctc
    44281 cgtcaggaac tggaagcctt tattgaacaa accacacccg ttctgcctgc cagtgaagag
    44341 gagcgcgaca cacagccgac gctgagtttt cagcgtgtac tgcaacgtgc ggtcttccat
    44401 gtccagtcct ccggtcgcaa tgaggtaacc ggtgcaaacg ttctggtcgc tatctttagc
    44461 gaacaggagt cgcaggcggc atatctgttg cgtaaacatg aagtcagccg tctcgatgtg
    44521 gtgaacttta tctctcatgg cacgcgtaaa gacgagccga cacagtcttc tgatcctggc
    44581 agccagccaa acagcgaaga acaagctggt ggggaggaac gtatggagaa tttcacgacg
    44641 aacctgaatc agcttgcgcg cgtgggcgga atcgacccac tgattggtcg tgagaaggag
    44701 ctggagcgtg ctattcaggt tctctgccgt cgccgtaaaa acaacccgct gctggtgggg
    44761 gaatctggtg tcggtaaaac cgcgattgcg gaaggtcttg cctggcgaat tgttcagggc
    44821 gatgtgccgg aagtgatggc tgactgtacg atttactctc tcgatatcgg ttctctgtta
    44881 gcgggcacta aatatcgcgg cgactttgaa aaacgtttta aagcgttgct caagcagctg
    44941 gagcaggaca ctaacagcat cctgtttatt gatgagatcc acaccattat cggtgcgggt
    45001 gcagcgtctg gtggccaggt cgatgcggct aacctgatca aaccgttgct ctccagcggt
    45061 aaaattcgcg taattggttc gacaacctat caggagttca gcaacatttt cgagaaagac
    45121 cgtgctctgg cgcgtcgctt ccagaaaatt gatattactg aaccgtcgat cgaagaaact
    45181 gttcaaatca tcaatggcct gaaaccgaag tatgaagcgc accacgacgt gcgttatacc
    45241 gcaaaagcgg tgcgtgcagc ggtagagctg gcggtgaaat acattaacga tcgtcatctg
    45301 ccggataaag ccattgacgt tatcgacgaa gcgggcgctc gcgcacgcct gatgccggta
    45361 agcaaacgca agaaaaccgt taatgtggcg gatattgagt ccgtggtggc ccgtattgcg
    45421 cgcattccag agaagagtgt ttctcagagt gaccgcgata ccctgaaaaa cctcggcgat
    45481 cgcctgaaaa tgctggtctt cggtcaggat aaagccattg aggcgctgac tgaagccatt
    45541 aagatggcgc gtgcaggttt aggtcacgaa cataaaccgg ttggttcgtt cctgtttgcc
    45601 ggccctaccg gggtcgggaa aacagaggtg acggtacagc tttcgaaagc gttgggcatt
    45661 gagctgctgc gctttgatat gtccgagtat atggaacgcc ataccgtcag ccgtctgatt
    45721 ggtgcgcctc cgggatacgt tggttttgat cagggaggtt tgctgactga tgcggtcatc
    45781 aagcatccac atgcggtgct gttgctggac gaaatcgaga aagcgcatcc ggacgtgttc
    45841 aatattctgt tgcaggtgat ggacaacggt acgctgaccg ataacaacgg acgcaaagcg
    45901 gacttccgta acgtggtgct ggtgatgacc accaacgccg gggtacgtga aactgagcgt
    45961 aaatccattg gtcttatcca ccaggataac agcaccgatg cgatggaaga gatcaagaag
    46021 atctttacac cggaattccg taaccgtctc gacaacatta tctggttcga tcatctgtca
    46081 actgacgtga tccatcaggt ggtggataaa ttcatcgtcg agttgcaggt tcagctggat
    46141 cagaaaggtg tttctctgga agtgagccag gaagcgcgta actggctggc cgagaaaggt
    46201 tacgaccggg caatgggcgc acgtccgatg gcgcgtgtca tccaggacaa cctgaaaaaa
    46261 ccgctcgcca acgaactgct gtttggttcg ctggtggacg gcggtcaggt caccgtcgcg
    46321 ctggataaag agaaaaatga gctgacttac ggattccaga gtgcacaaaa gcacaaggcg
    46381 gaagcagcgc attaatctga ttgttaggta ggttggtcaa gtccgtaatc tcgaaagagg
    46441 ttacggactt tttgtttatg gggtggagga ggttcagacc ctttttttaa tgatgatggt
    46501 aagttgttga taattagtgc tgcgggaagg taaggacaaa aaagggtgct gcaggagaat
    46561 gggatggttt tgctttattt acaacgggct aaacgtgtag tatttgagtt cactgccgta
    46621 caggcagctt agaaattcac aggtaacata ctccacccgc ccaccatgtt cactgccgta
    46681 cagacagata aaatgcgaaa aaaaagctcg cactttcgta cgagctcttc tttaaatatg
    46741 gcggtgaggg ggggattcga acccccgata cgttgccgta tacacacttt ccaggcgtgc
    46801 tccttcagcc actcggacac ctcaccaaat tgttttgcta ccaaacctca tgggtggcaa
    46861 cggggcgcta ctatagggag ttggagtaaa acggtcaaga agaattttaa tgataattat
    46921 tgtttgctca tactgtaaac aagttgtgca gtatatctac atcgagacaa gttacggact
    46981 tatacttcca aagtacttca tacatatcac aaaataaaaa ggccggttaa accgaccttt
    47041 tactcgttct ttctcttcgc ccatcaggcg gtaaaacaat cagcgactac ggaagacaat
    47101 gcggcctttg ctcaggtcgt acggggtcag ttcaacagtc actttgtcgc ccgtcaggat
    47161 gcggatgtag tttttgcgca ttttaccgga gatgtgtgca gtaaccacgt gaccgttttc
    47221 taactctacg cggaacatgg tattaggcaa cgtttcaaga acggtacctt gcatttcaat
    47281 attgtcttct ttggccatct aatcctctgg ggtatcacta ccgtaatttg aaccggcaag
    47341 ataatgccga agttctgtaa ataagtaaag atttgcgcgc taaatcgcaa caaacaggtt
    47401 cggcacatta ctccgaaaac acacggctaa gccgcaccaa aagcgcaacg tataagggag
    47461 cggtgagata aacgatgggc gttacctgac gcgaaaaatt ccttatcggc agcggggtaa
    47521 tgagcgtaac caactctgcg accgcaatta taacactctg gggagaaatg tgccgaaaac
    47581 attcattctt gtggtgaaaa caagcatcgt ggtacccaga aattattcgg caatcgtccg
    47641 aggcgcattt gattgagata attaaggtaa tcccggcggg gaatttcgca ggcaccaagc
    47701 gatgctgtgt gatcgttaag gacctggcag tcgataagct taccgccatg accgataaac
    47761 tcctcacaga ataccagaag cgccgtttta gacgcatttt ccatccggct gaacatggac
    47821 tcgccacaaa atagcgttcc ctgggccacg ccgtacatac cgccgacaag ctcatcttca
    47881 cgccagactt caatggagtg ggcatggccg agttcgtgaa ggcgatggta ggcttcgacc
    47941 acgccacgcg tgatccaggt tccttcttcg cgatcgctgg cacagccttc aatgacctga
    48001 ccaaaagcgt aattcatcgt gacacgatag ggcgagcgtt tatgaaatcg cttcatacta
    48061 cggctgatat gcagtgattc tggccatagc accgcgcggg gatcgggcga ccaccagagg
    48121 atggggtcgc ctggagaaaa ccacggaaaa ataccacgct ggtaagccat taacaggcgc
    48181 gcagggctaa gatcgccccc aagtgccagc aggccgttag gctcacgtaa tgcgccttcc
    48241 ggggaaggga aggctattga atggcgagaa agctgaacca ggcgcatgac cgcaaaactc
    48301 cacgcaagtc ggatcgttca ataatagctt acaaaccctg cttgaactgg taataacgcc
    48361 cctgtctggc aagcagctct gcgtgagtac cttgctcaat aatttgcccg ttgtccatca
    48421 ctattatttg ttggaaacga gagagtccgc gaagtcgatg ggtgaccatt aacaccgttt
    48481 tctcacgcat catttctgca agcaattcaa ggatctggct ttcggttgtg gcatctaagc
    48541 cttcggtagg ttcatccagc aacaccagtg gcgcatcatg taacagcgca cgggcgatag
    48601 ccagacggcg cagttcacca ccggagagct ggcgtccgcc ttcacctaac caactgttga
    48661 gacctgcatc ctcgagcagc ttctccagac caacgcgacg caagctctcc gccagagcct
    48721 catcactact gccaggcgag gcgagtaaca gattatcacg cagcgtggcg ctaaacagat
    48781 gcactcgctg aggaacaacg ctgatggtct gtcgtagagc cgcttcattc aggctggcta
    48841 tggggctatc gttaagcaaa atctcgccct gttgcgggtc ccaagcgcgg gtcagcagtt
    48901 gtaacagtgt tgatttgccg catccggttc gcccgagaat cgcaatatgt tccccggcgt
    48961 ttacctgaag agaaatccct ttaagtgcct gttgggattg ctccggataa gtgaactgaa
    49021 catcccgtaa tgtcagcgaa acgcgatcgg caacacgagt ttgggtatca gggaaggtga
    49081 cttccggttt ttgatccgtt aaatcagtga tccgaacggc agaggcaatg acttgcccca
    49141 gatgctgaaa tgcacccgtt actggtgcca gtgcttcaaa cgcggctaac gcgcagaaga
    49201 caaacagggc aattaacgcg ccgggttgag cattgccgcc aacgccgcca gacgccatcc
    49261 acagcatcag gatcaccgct aacgcgccaa tgagcagcat tatcgcttgc gacaatgcgg
    49321 tcagttcaga ttgacggcgt tgcgcttcca gccattgaat ttctgtattc tctagttgcg
    49381 tgcgataacg atcgctggca ccaaaaatgg tcagctcagc ttgcccttgc agccaggccg
    49441 tcagttgttg gcgatactgt ccgcgaagat gagtcagatt ttgcccggtg ctttttcccg
    49501 cacgataaaa cagcggtggc atcaggaaaa gcgtcagtaa cataatgccg cccagcgtaa
    49561 aggcgagggt gaaatcaagg aaacttaacc cgattgtcac catcataatc accacaaaag
    49621 cgcccaccag cggcgagata acgcgcaggt aaagatgatc gagcgtatca acatccgcca
    49681 ccacgcgatt gagcaattcg ccctgacgat agcgcgccag tccggcaggg gagaggggca
    49741 acaatttgct gaaggtgtaa atgcgcagat gctgcaacac gcggaaagtc gcgtcgtgac
    49801 ttaccagacg ttcaaaataa cgcccggcag tacgggtgat tgcggcacca cgcacgcccg
    49861 cagcgggtag catatagttg aagctgtaca gtccggcaac ccccgcaacc gctgaggccg
    49921 agaggaacca gccggaaagt gtcaacagtc cgatactggc gagcagcgtc acaattgcca
    49981 gcacaatacc aagacttaac atccatttat gacgtttata cagtgctaga tagggtagca
    50041 aagcgcgcat ttaaatctcc tcctgacgat gggccagtaa tgtggcgaat gggccaccag
    50101 ccacacttaa ttccgcgtaa cgtccttgct caataatccg gccatcctgc ataacccaaa
    50161 tgacatccca gtcagcaaga tcttctaact ggtgggtgac cattaacgtt gtctggcgca
    50221 gagaggcggc attcagcgcc tccattacgc gctgttcact gtgagcatca aggctggcag
    50281 cgggttcatc caacagtaat agcgaacagg gatttagtaa cgcacgggcc accgccacgc
    50341 gctgcgcctg ccccacggaa aggcgggcag cctggtcgcc aacaggcgta tcaacgcctt
    50401 gtggcaggag cggtagaaac tcgctgaccc aggcgttatc cagcgctgct tgtaattcat
    50461 gttcgctggc atcaggtcgc gccagtagta cgttatcccg taatgttgct gccggtaatt
    50521 gtggattttg cccaacccag gagagatgtt tacgccatga ttctggtgat aaatcgcgta
    50581 attctatccc gttgattcgt agcgatccct gatatgagag aaaaccagaa agcgcgttca
    50641 acagtgaact tttacctgaa ccgctgcgac caaccaacac ggcacgttgg cctgctggca
    50701 aagtaaagtt cagcggtccg gccagcgttt taccttccgg cgacgtgata aacagatcct
    50761 cggcctcaat ggtcaccgga tcggtcgatg ctaattccac ctcgccacac tgcggatggg
    50821 cgagcggggt ttccataaac gttttcagac tgtcagctgc accaacagcc tgggctttag
    50881 catgataaaa cgtaccgaga tcgcgtaatg gctggaaaaa ctctggcgca aggatcaggg
    50941 ccagaaaacc cgcagccagc gtcacgccag tatcgtagtg accaaaatcc agctcgccaa
    51001 gataggaaaa accaaagtag accgccacca gagcaattga cagcgaggta aaaaattcga
    51061 gaatgccgga ggataaaaat gccagccgta gcacttccat tgtccgttgg cggaaatctt
    51121 ccgaagcaga acgaatactt tcaatttcag cttcaccacg accaaaaata cgcaatgttt
    51181 ccatgccgcg caggcgatcg aggaaatgcc cacttaagcg agcaagagcg agaaagttac
    51241 gtcggttagc atcggcagcc cccattccaa ccagcgccat aaacaacgga attaacggtg
    51301 cagtgcccag cagaatgagc gccgcagccc agtttgaggg gaagattgcc accacaatca
    51361 gcaacggcac cgacactgcc agcgccattt gcggcaggta gcgtgcatag taatcatgca
    51421 tatcgtcaat ttgctcgagt accagcgtcg cccagctccc cgcaggttta ccctgaatcc
    51481 acgctggccc tgcttgttgc agacggtcga gaacctgccg gcggatggca aagcggatat
    51541 gctgcccggc gtgataaccc acccgttcgc gtaaccagac cacccatgcg cgcagtacaa
    51601 aggtcagaac cagtaacgta aagggaagca gcagggcttc acggggaata ttctccataa
    51661 tcatatgttg cagaattcgc gccatgaacc aggcctgggc aatgatcaat atgccgctca
    51721 caaagcccag cagacgagaa atattcagcc aacgttggga gatgacgctt tgctgtttta
    51781 accagcgggt taactctttt tgacgagatt tattcattgc acgcttagca ggtgagttat
    51841 cagaattatt tgcagagcaa tgttacaacg gggaaaaaat aaaggcgacc catagtcgca
    51901 aggtgtcgcc ttctttactt ttgttactga tttgtaaaat tattttgcgt cagctaaacc
    51961 atcgaggtag cgttccgcat caagtgctgc catgcagcct gtaccggccg aagtaatggc
    52021 ctgacgataa atatgatcca tcacgtcacc cgcggcaaag acgccaggaa tgctggtctg
    52081 ggtggcatta ccatgaatac ccgactgtac tttgatgtag ccgttttcca gttccagctg
    52141 cccttcgaaa atggcagtat tcgggctgtg accgatagca acaaacagac cggcaacgtc
    52201 gagtgattcg atgttatcgc tgttttgcgt atcgcgcaga cgaacgccag tgacacccat
    52261 ttgatcgccg gtcacttctt ccagcgtccg gttggtgtgc agaatgatgt tgccgttctc
    52321 cactttatcc atcagacgct taatgaggat tttttccgcg cggaaaccgt cacggcggtg
    52381 aatcagatgt acttccgaag cgatgttaga cagatacaac gcctcttcaa ccgcggtatt
    52441 gccgccgccg atgaccgcaa ctttctggtt gcgatagaag aaaccgtcgc aggttgcaca
    52501 agcagaaacc ccacggcctt taaaggcttc ttcagagggc aggccgagat agcgtgcaga
    52561 agctccggtg gcaataatca gcgcgtcgca agtgtattcg ccgttatcgc cattcagacg
    52621 gaacggacgg ttttgcagat ccaccttgtt gatatgatca aaaatgattt cagtttcaaa
    52681 tttggtggca tgttcgtgca tgcgctccat taataacgga ccggtcagat cgtttggatc
    52741 gccaggccag ttttccactt ctgtggtggt ggtcagttgg ccgccttttt ccatgccggt
    52801 aatcagcaca ggttgcaggt tggcgcgcgc cgcatagaca gcagcggtgt atcccgccgg
    52861 gcctgaaccc aggataagca gtttactgtg tttggtcgtg cccatgagat ccccatagtt
    52921 gttggcagac aatgggcagg attgtaggga atttactgac gtaaaaaaag agtatgacga
    52981 ttttgttaac aatttgtgca atcggcagca tcgataagca ggtcaaattc tcccgtcatt
    53041 atcacctctg ctacttaaat ttcccgcttt ataagctgat taaatgatga ataaacgccc
    53101 ctgttaatga atatctggca tgttgtacta aaaatcgatg ttttgctttg acaatcccct
    53161 ggtgttttgc gaaaacattc gaggaagaaa aaaaacagta ttcttatatg cgcataacca
    53221 tgcatgtaaa taccatgttt accgtgctag tgaaatctac gtatggcgtg gacagacgcc
    53281 attcgtgatg tcgatagctg ccacaaggca acggtcttct caccgtagac ccaggcattg
    53341 cgcgccgtga atcttcatga tttcggtcta tcgtgacggg tagcgactct gaacagtgat
    53401 gtttcagggt cagacaggag tagggaagga atacagagag acaataataa tggtagatag
    53461 caagaagcgc cctggcaaag atctcgaccg tatcgatcgt aacattctta atgagttgca
    53521 aaaggatggg cgtatttcta acgtcgagct ttctaaacgt gtgggacttt ccccaacgcc
    53581 gtgccttgag cgtgtgcgtc ggctggaaag acaagggttt attcagggct atacggcgct
    53641 gcttaacccc cattatctgg atgcatcact tctggtattc gttgagatta ctctgaatcg
    53701 tggcgcaccg gatgtgtttg aacaattcaa taccgctgta caaaaacttg aagaaattca
    53761 ggagtgtcat ttagtatctg gtgatttcga ctacctgttg aaaacacgcg tgccggatat
    53821 gtcagcttac cgtaagttgc tgggggaaac cctgctgcgt ctgcctggcg tcaatgacac
    53881 acggacatac gttgttatgg aagaagtcaa gcagagtaat cgtctggtta ttaagacgcg
    53941 ctaacacgga acaggtgcaa aatcggcgta ttttgattac actcctgtta atccatacag
    54001 caacagtact ggggtaacct ggtactgttg tccgttttag catcgggcag gaaaagcctg
    54061 taacctggag agcctttctt gagccaggaa tacactgaag acaaagaagt cacattgaca
    54121 aagttaagta gcggccgtcg ccttctggaa gcgttgctga tccttattgt cctgtttgcc
    54181 gtctggttga tggctgcctt actaagcttt aacccttcgg accccagctg gtcgcaaacg
    54241 gcctggcatg aacctatcca taatttaggt gggatgcccg gtgcgtggct ggcagatacg
    54301 ctgttcttta tttttggcgt gatggcttac accattcccg tcattattgt cggcggttgt
    54361 tggtttgcct ggcgtcatca gtccagtgac gaatacattg attattttgc cgtttcgtta
    54421 cgcatcattg gcgttttggc gctcatcctt acctcctgtg gtctggcggc aatcaacgct
    54481 gacgatatct ggtattttgc ctccggtggc gtcattggca gcttactaag cactacgtta
    54541 caaccactgc tacacagtag cgggggaact attgcgctgc tctgcgtttg ggctgcgggc
    54601 ctgacgctgt tcaccggttg gtcatgggtg accattgctg aaaaactcgg cggctggatt
    54661 ttaaacattc tcaccttcgc cagtaatcgt acccgtcgcg atgatacctg ggtcgatgaa
    54721 gatgaatatg aagatgacga agagtatgaa gatgaaaacc acggcaaaca gcatgaatca
    54781 cgccgtgccc gtattcttcg cggcgcgcta gcgcgtcgta aacggttggc ggaaaaattc
    54841 attaatccga tggggcggca aacagacgct gcgttgttct ccggtaagcg gatggatgat
    54901 gaagaagaga ttatctacac tgcacgcggt gtggctgccg acccggacga cgtcctattt
    54961 tcgggcaatc gtgcaacgca gccagaatat gacgaatacg atccattatt aaacggtgcg
    55021 ccaattaccg aacctgttgc tgtagcagct gctgctacca cggcgacaca aagctgggct
    55081 gcgccggttg aacctgtgac ccagacgccg cctgttactt ctgttgatgt tccaccttcg
    55141 caacctacag tagcctggca gcctgtaccg ggtccacaaa cgggagagcc ggttattgct
    55201 cctgcaccgg aaggttaccc acagcagcca caatatgcgc agcctgcagt gcaatataat
    55261 gagccgctgc aacaacctgt acagccacag cagccgtatt atgcgcctgc agctgaacaa
    55321 cctgtgcaac aaccttacta cgctcctgcg gcggaacaac ctgttcagca accgtattac
    55381 gcaactgcgc cggaacagcc tgcgcaacag ccgtattatg cccctgcgcc agaacaaccg
    55441 gtggcaggta acgcctggca agccgaagag cagcaatcca cttttgctcc acagtctaca
    55501 taccagactg agcaaactta tcagcagcca gccgctcagg agccgttgta ccaacagccg
    55561 caacccgttg aacagcagcc tgttgtggag cctgaacccg ttgtagaaga gacaaaaccc
    55621 gcgcgtccgc cgctttacta ttttgaagaa gtggaagaga agcgagcccg tgaacgtgaa
    55681 caacttgcgg cctggtatca accgattcca gaaccggtta aagaaccaga accgatcaaa
    55741 tcttcgttga aagcgccttc tgctgcagca gtacctccag tagaagccgc tgccgctgtt
    55801 tctccgctgg catctggcgt gaaaaaagcg acactggcga cgggggctgc cgcaaccgtt
    55861 gccgcgccag tcttcagtct ggcaaatagc ggtggaccgc gtccgcaagt caaagaggga
    55921 attggcccgc agttgccacg accgaaacgt attcgcgtgc caactcgtcg tgaactggcg
    55981 tcttacggta ttaagctgcc ctcacagcgt gcggcggaag agaaagcccg tgaagcccgg
    56041 cgcaatcagt atgattctgg cgatcagtat aacgatgatg aaatcgatgc gatgcagcag
    56101 gatgaactgg cacgtcagtt cgcccagaca cagcagcaac gctatggcga acagtatcaa
    56161 catgatgtgc ccgtaaacgc agaagatgca gatgctgcgg cagaggctga actggctcgt
    56221 cagtttgcgc aaactcaaca acaacgttat tccggcgaac aaccggctgg ggcgaatccg
    56281 ttctcgctgg atgattttga attttcgcca atgaaagcgt tgctggatga tggtccacac
    56341 gaaccgttgt ttacgccaat tgttgaacct gtacagcagc cgcaacaact ggttgcaccg
    56401 cagcagcagt atcagcagcc acaacagccg gttgcgccac agcagcaata tcagcagccg
    56461 caacagccgg ttgcgccgca gccgcagtat cagcagccac aacagcaggt tgcgccgcag
    56521 ccacaatatc agcagccgca acaaccggtt gcaccgcagc agcaggatac cctgcttcat
    56581 ccgctgttga tgcgtaatgg cgacagccgt ccgttgcata aaccgacgac gccgctgcct
    56641 tctctggatt tgctgacacc gccgccgagc gaagtggagc cggtagatac ctttgcgctt
    56701 gaacaaatgg ctcgcctggt ggaagcgcgt ctggctgatt tccgtattaa agccgatgtc
    56761 gtcaattact ctccggggcc ggttatcact cgctttgaac ttaacctggc tcctggcgta
    56821 aaagcggcgc gcatttctaa cttgtcacgg gaccttgccc gttcactttc gacggtggcg
    56881 gtgcgtgtcg ttgaagttat tcctggcaaa ccctatgtag gtctggagtt accaaataaa
    56941 aaacgacaaa ccgtttatct gcgcgaagtt ttggataacg ccaaattccg cgataatccg
    57001 tcgccattaa ccgtggtgct gggtaaagat atcgccggtg agccggtggt tgccgatctg
    57061 gcgaaaatgc cgcacttgtt ggttgcgggg actaccggtt ccggtaaatc tgtcggtgtg
    57121 aacgcgatga tcctgagcat gctttataaa gcacagccag aagatgtgcg tttcatcatg
    57181 atcgacccga aaatgctgga gctttcggtt tatgaaggca ttccgcatct gttaacggaa
    57241 gtcgttactg atatgaaaga tgccgccaac gcgctgcgct ggtgtgttaa cgagatggag
    57301 cgtcgttata aactgatgtc tgcgctgggt gtgcgtaatc tggcgggtta taacgaaaaa
    57361 attgctgaag ccgatcgcat gatgcgtccg attccagacc cgtactggaa gccgggtgac
    57421 agtatggatg cccagcatcc ggtgctgaaa aaagaaccat acattgtggt gttggttgac
    57481 gaatttgccg acctgatgat gacggtaggt aaaaaagtgg aagagctgat agcacgtctg
    57541 gcgcaaaaag cccgtgccgc gggtatccac ctcgtactgg caactcagcg tccatcggtt
    57601 gatgttatta ctggtctgat taaagcgaat attccgaccc gtatcgcctt taccgtatcc
    57661 agtaagattg actcacgtac cattcttgat caggctggcg cggaatcact gctggggatg
    57721 ggggatatgc tctactctgg gccgaactcc acgttgccgg tacgtgtcca tggtgctttt
    57781 gttcgcgatc aggaagttca tgccgtggtg caggactgga aagcgcgtgg tcgcccacag
    57841 tatgttgatg gcatcacttc cgacagtgaa agcgaaggtg gcgcgggcgg tttcgatggc
    57901 gctgaagaac tggatccgtt gttcgatcag gcggtgcagt ttgtcactga aaaacgcaaa
    57961 gcgtcaattt ctggcgtaca gcgtcagttc cgcattggtt ataaccgtgc agcgcgtatt
    58021 atcgaacaga tggaagcgca ggggattgtc agcgaacagg ggcacaacgg taatcgtgaa
    58081 gtgctggccc caccgccgtt tgactaatta atgcattgcc ggataaggcg cggtagcgtc
    58141 gcatccggca ctctatcaac tgaaaattca gtattttctt ttttcctcaa gctgattatt
    58201 agcctggaat agagagtaga gggaactccc gatcgggagt gacgtaattt gaggaataat
    58261 gatgaaaaaa attgccatca cctgtgcatt actctcaagc ttagtagcaa gcagcgtttg
    58321 ggctgatgcc gcaagcgatc tgaaaagccg cctggataaa gtcagcagct tccacgccag
    58381 cttcacacaa aaagtgactg acggtagcgg tgcggcggtg caggaaggtc agggcgatct
    58441 gtgggtgaaa cgtccaaact tattcaactg gcatatgaca caacctgatg aaagcattct
    58501 ggtttctgac ggtaaaacac tgtggttcta taacccgttc gttgagcaag ctacggcaac
    58561 ttggctgaaa gatgccaccg gtaatacgcc gtttatgctg attgcccgca accagtccag
    58621 cgactggcag cagtacaata tcaaacagaa tggcgatgac tttgtcctga cgccgaaagc
    58681 cagcaatggc aatctgaagc agttcaccat taacgtggga cgtgatggca caatccatca
    58741 gtttagcgcg gtggagcagg acgatcagcg cagcagttat caactgaaat cccagcaaaa
    58801 tggggctgtg gatgcagcga aatttacctt caccccgccg caaggcgtca cggtagatga
    58861 tcaacgtaag tagaggcacc tgagtgagca atctgtcgct cgatttttcg gataatactt
    58921 ttcaacctct ggccgcgcgt atgcggccag aaaatttagc acagtatatc ggccagcaac
    58981 atttgctggc tgcggggaag ccgttgccgc gcgctatcga agccgggcat ctgcattcta
    59041 tgatcctctg ggggccaccg ggtaccggca aaacaactct cgctgaagtg attgcccgct
    59101 atgcgaacgc tgatgtggaa cgtatttctg ccgtcacctc tggcgtgaaa gagattcgcg
    59161 aggcgatcga gcgcgcccgg caaaaccgca atgcaggtcg ccgcactatt ctttttgttg
    59221 acgaagttca ccgtttcaac aaaagccagc aggatgcatt tctgccacat attgaagacg
    59281 gcaccatcac ttttattggc gcaaccactg aaaacccgtc gtttgagctt aattcggcac
    59341 tgctttcccg tgcccgtgtc tatctgttga aatccctgag tacagaggat attgagcaag
    59401 tactaactca ggcgatggaa gacaaaaccc gtggctatgg tggtcaggat attgttctgc
    59461 cagatgaaac acgacgcgcc attgctgaac tggtgaatgg cgacgcgcgc cgggcgttaa
    59521 atacgctgga aatgatggcg gatatggccg aagtcgatga tagcggtaag cgggtcctga
    59581 agcctgaatt actgaccgaa atcgcaggtg aacgtagtgc ccgctttgat aacaaaggtg
    59641 atcgctttta cgatctcatt tccgcactgc ataaatcggt acgtggtagc gcacccgatg
    59701 cggcgctgta ctggtatgcg cgaattatta ctgccggtgg cgatccgtta tatgttgcgc
    59761 gtcgctgtct ggcgattgcg tctgaagatg tgggtaatgc tgatccacga gcgatgcagg
    59821 tggcaattgc agcctgggat tgctttactc gcgttggccc ggcggaaggt gaacgcgcca
    59881 ttgctcaggc gattgtttac ctggcctgcg cgccaaaaag caacgctgtc tacactgcgt
    59941 ttaaagctgc gctggcggat gctcgcgaac gtccggatta tgacgtgccg gttcatttgc
    60001 gtaatgcgcc gacgaaatta atgaaggaaa tgggctacgg gcaggaatat cgttacgctc
    60061 atgatgaagc aaacgcttat gctgccggtg aggtttactt cccgcgggaa atagcacaaa
    60121 cacgctatta tttcccgaca aacaggggcc ttgaaggcaa gattggcgaa aagctcgcct
    60181 ggctggctga acaggatcaa aatagcccca taaaacgcta ccgttaatgt tatcgttgcg
    60241 gtaatgttgt tactgtatcc ctgtggtcgc aggctgtggc cacatctccc atttaattcg
    60301 ataagcacag gataagcatg ctcgatccca atctgctgcg taatgagcca gacgcagtcg
    60361 ctgaaaaact ggcacgccgg ggctttaagc tggatgtaga taagctgggc gctctcgaag
    60421 agcgtcgtaa agtattgcag gtcaaaacgg aaaacctgca agcggagcgt aactcccgat
    60481 cgaaatccat tggccaggcg aaagcgcgcg gggaagatat cgagccttta cgtctggaag
    60541 tgaacaaact gggcgaagag ctggatgcag caaaagccga gctggatgct ttacaggctg
    60601 aaattcgcga tatcgcgctg accatcccta acctgcctgc agatgaagtg ccggtaggta
    60661 aagacgaaaa tgacaacgtt gaagtcagcc gctggggtac cccgcgtgag tttgactttg
    60721 aagttcgtga ccacgtgacg ctgggtgaaa tgcactctgg cctcgacttt gcagctgcag
    60781 ttaagctgac tggttcccgc tttgtggtaa tgaaagggca gattgctcgc atgcaccgcg
    60841 cactgtcgca gtttatgctg gatctgcata ccgaacagca tggctacagt gagaactatg
    60901 ttccgtacct ggttaaccag gacacgctgt acggtacggg tcagctgccg aaatttgctg
    60961 gcgatctgtt ccatactcgt ccgctggaag aagaagcaga caccagtaac tatgcgctga
    61021 tcccaacggc agaagttccg ctgactaacc tggtgcgcgg tgaaatcatc gatgaagatg
    61081 atctgccaat taagatgacc gcccacaccc catgcttccg ttctgaagcc ggttcatatg
    61141 gtcgtgacac ccgtggtctg atccgtatgc accagttcga caaagttgaa atggtgcaga
    61201 tcgtgcgccc ggaagactca atggcggcgc tggaagagat gactggtcat gcagaaaaag
    61261 tcctgcagct gctgggcctg ccgtaccgta aaatcatcct ttgtaccggc gacatgggct
    61321 ttggcgcttg caaaacctat gacctggaag tatggatccc ggcacagaac acctaccgtg
    61381 agatctcttc ctgctccaac gtttgggatt tccaggcacg tcgtatgcag gcacgttgcc
    61441 gcagcaagtc ggacaagaaa acccgtctgg ttcataccct gaacggttct ggtctggctg
    61501 ttggtcgtac gctggttgca gtaatggaaa actatcagca ggctgatggt cgtattgaag
    61561 taccagaagt tctgcgtccg tatatgaacg gactggaata tattggctaa tacccaattt
    61621 ttctgaatct aaaaagcgcc tgcgggcgct ttttttgtct ccctttgata ccgaacaata
    61681 attactcctc acttacacgt aatactactt tcgagtgaaa atctacctat ctctttgatt
    61741 ttcaaattat tctatgtata caagcctata tagcgagctg ctatagaaat aattacacaa
    61801 tacggtttgt tactggaatc aatcgtgagc aagcttgagt gagccattat gaaaacgaaa
    61861 atccctgatg cggtattggc tgctgaggtg agtcgccgtg gtttggtaaa aacgacagcg
    61921 atcggcggcc tggcaatggc cagcagcgca ttaacattac cttttagtcg gattgcgcac
    61981 gctgtcgata gcgccattcc aacaaaatca gacgaaaagg ttatctggag cgcctgtaca
    62041 gttaactgtg gtagtcgctg cccgctacgt atgcacgtcg tggacggtga aatcaaatat
    62101 gtcgaaacgg acaataccgg cgatgacaat tacgacggcc tgcactaggt tcgcgcctgc
    62161 ctgcgtgggc gttccatgcg tcgccgtgtc tacaatccgg accgcctgaa atatccgatg
    62221 aaacgagtcg gggcgcgcgg tgaaggcaaa ttcgagcgca ttagctggga agaagcctac
    62281 gacatcatcg cgaccaatat gcagcgcctg atcaaagagt acggcaacga gtctatctat
    62341 ctgaactatg gcaccggtac gctgggcggc accatgaccc gctcctggcc gccgggaaat
    62401 accctggtcg cgcggctgat gaactgctgc ggcggctatc tgaaccatta cggcgactac
    62461 tcctccgcgc aaattgcgga aggtttgaac tatacctacg gcggctgggc agatggcaac
    62521 agcccgtcgg atatcgaaaa cagtaagctg gtagtgctgt ttggtaataa ccctggcgaa
    62581 acgcgaatga gtggcagtgg ggtgacttac tatcttgaac aggcacgcca gaaatctaat
    62641 gcccgcatga tcatcatcga tccgcgctat accgacaccg gtgccgggcg cgaagatgag
    62701 tggatcccta ttcgtccggg aacagatgcc gcactggtta acggtctggc gtacgtcatg
    62761 atcactgaaa acctggtgga tcaggcattc ctcgataaat attgcgttgg ctacgatgag
    62821 aaaaccctgc cagccagtgc gccgaaaaat ggccactata aagcttatat tctgggtgaa
    62881 gggccagatg gcgtggctaa aacaccggaa tgggcctcac aaatcaccgg tgttccggca
    62941 gacaaaatca tcaaactggc tcgtgaaatc ggcagtacca aaccggcgtt tatcagccag
    63001 ggatggggcc cgcagcgtca cgctaacggt gaaatcgcaa cccgtgctat ctcgatgctg
    63061 gcgattctga ccggtaacgt tggtattaac ggaggcaaca gcggcgcgcg tgaaggttca
    63121 tacagcttac cgtttgtccg tatgccgacc ttggaaaacc cgatccagac cagcatttcg
    63181 atgtttatgt ggaccgatgc cattgaacgt ggcccggaaa tgacggcgct gcgtgatggt
    63241 gtacgcggga aagataagct ggatgtgccg atcaaaatga tctggaacta tgccggtaac
    63301 tgcctgatta accagcattc tgaaatcaac cgtacccatg aaatccttca ggatgataag
    63361 aagtgcgagc tgattgtggt tatcgactgc cacatgacct catcggcgaa atatgctgac
    63421 atcctgctgc ctgactgcac cgcttccgaa cagatggact ttgcgctgga tgcatcctgc
    63481 gggaatatgt cttacgtgat tttcaacgat caggtgatta aaccgcgctt tgaatgtaag
    63541 accatctatg aaatgaccag cgaactggca aaacgtcttg gcgttgagca acagtttact
    63601 gaaggccgta cacaggaaga gtggatgcgg catctgtatg cccagtcgcg ggaagcgatt
    63661 cctgaactac caacgtttga agagttccgc aagcagggga tctttaaaaa gcgcgaccca
    63721 caagggcacc acgttgctta taaagctttc cgtgaagatc ctcaggcaaa ttcactgacc
    63781 acgccatcgg gcaaaattga gatttattcg caggcgctgg ctgacattgc cgctacctgg
    63841 gaattgccag aaggagatgt gatcgatcca ctgccgatct acacgccggg ctttgaaagt
    63901 tatcaggatc cgttgaacaa acagtatccg ctgcagctta cgggtttcca ctataaatct
    63961 cgcgttcact caacttacgg cgacgttgat gtgctgaaag cagcttgccg tcaggaaatg
    64021 tggatcaacc cgcttgatgc gcaaaaacgc ggtatcaaca acggcgataa agtcaggatc
    64081 tttaacgatc ttggtgaggt tcatattgag gcgaaagtga cgccacgaat gatgccgggt
    64141 gtggtcgcac tgggtgaagg tgcctggtat gacccggata caaaacgtgt cgataagggc
    64201 ggttgtatca acgtactgac cactcaacgt ccgtctcctc tcgctaaggg gaatccgtca
    64261 catacaaacc ttgttcaggt tgaaaaggtg taaggagtaa ccgatgacaa cccagtatgg
    64321 attttttatt gattccagcc gttgcaccgg ttgcaaaacc tgcgagctgg cctgtaaaga
    64381 ctacaaagat ttgacgccag aagtcagctt ccgccgcatt tatgaatatg ctggcg
//
LOCUS       DAJVUK010000007        47864 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.007, whole genome shotgun sequence.
ACCESSION   DAJVUK010000007 DAJVUK010000000
VERSION     DAJVUK010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 47864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47864
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.007"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..325
                     /locus_tag="OQQ57_000462"
     CDS             <1..325
                     /locus_tag="OQQ57_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prepilin-type cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCS1955336.1"
                     /translation="QKFQGQYTGTDYVKILTESGGLPADMIAGGNKAKNAWGGAVTIK
                     VSSDKYSYVIESSNVPKKNCIDLVTSLRSSSMFTKINGNVTNKVDPSTVCNADKTTIK
                     LETNS"
     gene            370..855
                     /locus_tag="OQQ57_000463"
     CDS             370..855
                     /locus_tag="OQQ57_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HCS1955337.1"
                     /translation="MNRLFILTVIFSLLCSLPSAQASPQDKQYDRCFITAGKRYSIDP
                     GLLKIIARRESSLNPRAINHNRNDSGKIISTDYGIMQINSTHIPGLKKMGIIRSEKDL
                     LNNVCLNIQTGAWILARHFQRCGVNWECLGSYNAGFSKSNTHRRMKYARQIYSAYMQG
                     R"
     gene            871..1497
                     /locus_tag="OQQ57_000464"
     CDS             871..1497
                     /locus_tag="OQQ57_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000939244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HCS1955338.1"
                     /translation="MLQIIPALLVAITVVIQCLAVQMSRYRLSRMNARPPHHGLALMS
                     GMLAAAAIILRLYQNDSAVGVLFMTIMTGCMTLMTLTDAASCRLPRPFTIMYLISGSA
                     FRLWQGDWLTGLCSAGFWFLLLLLFRQYTSYRRKTETIGLGDVFLIAGIAIWSPPGDI
                     PWIVATAAGGALLYLWCNRQRRITRELPFGPFLCASQYAFTFYPGGLW"
     gene            1515..2876
                     /gene="pilV"
                     /locus_tag="OQQ57_000465"
     CDS             1515..2876
                     /gene="pilV"
                     /locus_tag="OQQ57_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001168172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /protein_id="HCS1955339.1"
                     /translation="MQKDNDKGFALLEILGGLVVISLLMPLFWSYIEDYLNEMRNQSA
                     AFHADAYNTAARTYIADNNARLHSGTLPATFTADELIRKGYLKGLNRSPFGQSYTTGI
                     RRNTSTGRLEALTCSTGGENIKDDALRSIASLLPGLGGFIGKNGTATGVFGGWTDKPG
                     DYGLSCNGGHIAIVMMGDDLQESDRLYRFQVPGRPELNQMNTAINMGGNNLNNAGNVN
                     GQSATLKGDVTSENGWLITKNDKGWKNITYGGGFTMTDSQWIRAVGGKGIITTGEIKG
                     GKVSGGTVRSDGRLSTGEYLQLDKTAVANTKCSPDGLVGRDSKGAILSCQSGVWVGFE
                     SYPVGSPIPWPSATPPQGYLLMNGQSFSCSRYPQLARAYPSCKLPDLRGVFIRGWDNG
                     KGLDGDRNRQLLSYQADQSGVYHERGGWLKGHHSGMPYWAQGSTTEMRPKNIAFNYIV
                     KAS"
     gene            3349..4170
                     /locus_tag="OQQ57_000466"
     CDS             3349..4170
                     /locus_tag="OQQ57_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraE"
                     /protein_id="HCS1955340.1"
                     /translation="MKTDSTGIAARMMLSLDRERICECLLSHRQLQSTPLQVRYPQGV
                     RDALGIMSEQLSLSVSDLTRILVEDALSEMFLPADNIVRRLLSRMEHIMQAHDISATT
                     MAALLAPWNIRPAVFREPDRLTDYLTGEILAALADWFYLSPEWLNGRVHYPLYRPGDW
                     PATQEIFCRIISARENMDIILWHGFPFAGTHSGEYCGVLLRQKKEINNTIIYPVLSLY
                     PVRMDIEKEGWFQMARKISPDIPVRAVTLTPAQAEYLITGKILPTALFRVPLSPW"
     gene            4272..5474
                     /locus_tag="OQQ57_000467"
     CDS             4272..5474
                     /locus_tag="OQQ57_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HCS1955341.1"
                     /translation="MMMKKHITRTLIASAVLFSFNSTAATSYFEARNDAMGGTGVASS
                     HYGVAPLANPALLTKSGAKDDFSLLLPSVGAQLSDPGNIADNADKISDDWKAFDRAVD
                     SHSGVPQTAARLKERLQDFRNTHASAQAGVSAVAALPGDTLAAALMLKTFGTVSVDGK
                     VSDADLNYLESIADSGSQDVDKNRLTSQAFARAALITDVGVALATELETAGQKWSLGF
                     TPKFQRVDLFNYNTLIKNYDSSAFKGDRYHNTQNGINADIGASMDLDDNWTLGLVAQN
                     LIPRSIETKEVHGVTETFRIRPQVTTGVSWHNDMFTTALDVDLTPASGFTSDSKRQFA
                     AVGAEFNAWKWAQLRTGYRQNLVSNNGSAFTAGIGLSPFDVIHIDVAGLVGTDNNYGA
                     IAQLQFTF"
     gene            5578..6036
                     /locus_tag="OQQ57_000468"
     CDS             5578..6036
                     /locus_tag="OQQ57_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238171.1"
                     /note="Members of this family include DotD of type IVB
                     secretion systems and TraH of plasmid conjugative plasmid
                     systems, both lipoproteins; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DotD/TraH family lipoprotein"
                     /protein_id="HCS1955342.1"
                     /translation="MQKKRITLAGGVAMLCLSGCHLPPDNTAPARKYGAASEVAVTRH
                     AQYQLWEQGTYSAALPSRQPGGSLQAHSGRVSFDWEGDALELLSELARLRGQQFSYSG
                     VRLPLPVSLHVRDMTFADALRLTEAQTAWRAVLSQSAGRLHLSYMPTEKK"
     gene            6033..6869
                     /locus_tag="OQQ57_000469"
     CDS             6033..6869
                     /locus_tag="OQQ57_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000745049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HCS1955343.1"
                     /translation="MKKQVCLLLSGLLLAGCAGQHHRPPAGMAGNLPPPDLRAWLTPT
                     DNQDDDISDTRRQMLTDAGRTLGFRGGKAQRSWELIQALNARESTLNALYDFRPLISK
                     EGWLPPVIDEAQDVAHIQPDQIRTASRVWTILRPERFVSNPPGWRDWLLRGLSTTATP
                     GTEGRVVPEDRAQRRLWENALRQGWQEGRDNADLTLEANQKRLTRDYRGMMLYALLWR
                     QGMITRPDVTEQRQTVTGNGRKLITGDHVRRLKTHAEFTLQKSRWRPVVSTEGAPDEI
                     TR"
     gene            6853..8001
                     /gene="traJ"
                     /locus_tag="OQQ57_000470"
     CDS             6853..8001
                     /gene="traJ"
                     /locus_tag="OQQ57_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid transfer ATPase TraJ"
                     /protein_id="HCS1955344.1"
                     /translation="MKLPDEFGTFPFARFTAEEFRYFFAWCARHRVSDIDLTGGSPVS
                     VSRFGRRVRSSAHPLPSSIMMALSDELFGREVLPRVLSGHPVDRTIQVSGDASGRYGL
                     QRGQRVRLRCHLIQGTSATEEKVISVTMRVIPSDIPDILTMNIEPDLLDAMLRKTGLG
                     FICGETGSGKSTLAAALYRYIQTHFPDRKTVTYEDPVEYILGGENDLLPPHQAEIGRD
                     VESFAAGLRSAVRRNPDIIGIGEIRDYETADAAVQAGNTGHFCIGTMHTKSPGETFAR
                     LLGLFPPEIRDSMAAATLSLVQFILVQVLVRTNDGGRQAVREYIVITDELRDTLSRQS
                     HATWGHYIDEIIRKEKRRIRDQVLTMYQTGSIEASEAALFIPAGEFPK"
     gene            7998..8288
                     /gene="icmT"
                     /locus_tag="OQQ57_000471"
     CDS             7998..8288
                     /gene="icmT"
                     /locus_tag="OQQ57_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001542523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IcmT/TraK family protein"
                     /protein_id="HCS1955345.1"
                     /translation="MKREGFWRDVTPPLNIYGVPLPFTMIYLLLFPYPSKTTFWVCSG
                     ILLFFVLLGYSGWTVRTLCRRLYSLVQGKQASGRPWWYRHRTELPREWRGTE"
     gene            8352..12413
                     /locus_tag="OQQ57_000472"
     CDS             8352..12413
                     /locus_tag="OQQ57_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCS1955346.1"
                     /translation="MKSRYRTWLAVPPEETEAVKNAVPPLNGRKAVAWDPEKKLWYAR
                     AGTELSLLERWLPRPQELSMDAGDPVTEFAQVLENAGLVIQGLPQMDGAIHRVATRDD
                     KKGAKSGAYRAYLDGRPAGWYRDYRSADDSPTNWVFSGGEQHDPLARLHLRAFAQQQR
                     DDNARKLQQQYNKQAGYARSYINGLPQATAHEYLTRKGIRAAPGVRLNNKNELVIPFS
                     NGRGEIRSYQRIPVTGGKDARILKDSEKTGNWFTFGTPENGRPLLFAEGYATAASLHE
                     ATGLPVLMTVDASNMIAVAENARQIWTDSPFVFCADNDHQREINKGVFSATKAAEVTN
                     GEVIIPAFTEAEKAQGLTDFNDLDASRGRDNFQNAMNAQLKHIGIPTPNSDTADHREA
                     VVIDNLIFTPVKDEKPQMSPENRQSTAPETELATQDTPYDTHSDDTENQAYEDDYAAY
                     ASLQSVTAETLSPDKPLENIASAADTGTENTSVPTAGDQEDLNTDATGTDTAHNSDTA
                     ETGTLPEPAGMQSVQQATTEPTAEDKPHENVVSAADTREENASVATADTGEENASATT
                     ADNQSTQAEEHPRSEDTPETSLSDAAGTQHTTTTQSEEQVQVSMASADDWSAFAEDLN
                     ADTPGAPTVHNTDNAETNTVSEPAGMRPVQQVTTELTAEDKAQEKSVASAAETGAEHS
                     SDITDDNRNAPAEELNADATVAVHNTGTAETASPSEPAETQPVRQATAEPTAEDKLQE
                     ERLVSATETSTANEAARPETPSLFSRLRRFLTGGKSRTSEPSVIQEKKPTEAETATEE
                     VAPPSPPETSPEDTSSAEPDTIIFAPRRPDSPQRHNLDEILKNLTHKEFPDRTALYSV
                     DGEPAFLDRLYCLEMVDGASADDKKVLAALAVATNFYGGVIELTGSDAFKQKAMQLIV
                     EYDIKVRMKLPAQRAALEKIRKEKEMAHDAIVTHRPTPELNRQSPEETTMAQPAPPVS
                     PKAEAEQTAGSTAETPHPEAPVTAKAEAPRADRPEQPAAPSSAPEKAPVSAQPQQPDT
                     PEEEPPGKLSPGESVTAVLTNYGEKEYAPGKGRCFFVELTNRSGKREYWGNGLEELVK
                     NHQKGDPVTLTLQARETFRLSGETRDRIRNIWAITPVSNGITVNNDQPHAGQHTLEFP
                     MATFSQVMLQMQQHWPQIMQEVRSPKNPPNNLYIGEDRQPASAPQDQSMRLPLAGNAP
                     NELIPAIASADKDNRQLNLLLVHSADDHLQGVVRLNGTLYPALATPSADNRQLVINAL
                     TDNGLQFAGYGEAVNHDENNHQRPSPQIMQFHLKQQDSPLFAAIHKPEEQPDKLFRSL
                     GFEQTWKEWSDSQKAEDRQEKTLQQAQSHSPGR"
     gene            12430..12780
                     /locus_tag="OQQ57_000473"
     CDS             12430..12780
                     /locus_tag="OQQ57_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HCS1955347.1"
                     /translation="MNMKKTLLVILTGITLASPVAGAATCRAGAAAEAGSRAAWERAR
                     TASQAWSQRENDVASSLQSCLSRIKDISITLPQFPSLDKLLRDLENQVCDAVVDRVND
                     HLPGNIDPWKDYNL"
     gene            12792..13487
                     /locus_tag="OQQ57_000474"
     CDS             12792..13487
                     /locus_tag="OQQ57_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DotI/IcmL family type IV secretion protein"
                     /protein_id="HCS1955348.1"
                     /translation="MSEAQPTSPVSPEADNSGDIYNPVLRTIAQSEQRAALVPGLVRA
                     LLCSGAALCISLVANGIQYWHATGVTREYFATDNGRLVRLAPTSQPAWSQSDVMNFGS
                     MTLSEAFNLDFVHYRKQITTQAPRFSEAGFAGYVNALQASNILDTIKKEKFNLTTTIG
                     AGTLVNQGQMENGVWFWKFQYPVRMRLVGQTSTRPEQAFTFEITVRRVDPRIKPGGME
                     ISQMVSRNAAAGI"
     gene            13498..14457
                     /locus_tag="OQQ57_000475"
     CDS             13498..14457
                     /locus_tag="OQQ57_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001191879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
                     /protein_id="HCS1955349.1"
                     /translation="MHIHHLIGALLIVCGTVTAADNPGWKNARSPQTGGKTAQATGNT
                     PPAAQLPGNLPPPGAALVQEGASLDSPLNAGEIRELRGIMADNERAISAPLTSVVPRI
                     SSLTVNLSPGASLPLVRTALHNVSVVTFTDVNGSPWPQSDPPYNAAPGHFDVQFNGNM
                     VSVTPLRAWAAGNVTVYLKGLSVPVILNITSGETDTTTLSQEIDSRLDLRIPRQGPAS
                     PVVSIPSEKIALHDATLQAFLDGVPPDDPAIRRLKFSGNVPDTTIWQHGDDLLVRSRA
                     MLRDEFEQTLASADGTRLWKLPVTPLLTFSVNGQSVHVTPELE"
     gene            14461..15792
                     /gene="traO"
                     /locus_tag="OQQ57_000476"
     CDS             14461..15792
                     /gene="traO"
                     /locus_tag="OQQ57_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001272008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraO"
                     /protein_id="HCS1955350.1"
                     /translation="MSEEQDTAAKSGKKLSALLVMGGVIIIGGGYLLLTWLSPENAAS
                     LSSVNINSTTSGGGRNVMETQHYRDLLRADNERGAAEALRNNETFIASLPRGLDTDTG
                     NDQKRDNPPDDQSGTSGQNASPPQEDQTAREKRREALQKLLARINTQHQDARPPVVAA
                     AMWSTTGTPGTAPHASPSGTVTSQHPRLQETSLATPATRQGIQLIPALTRVPAYIDTA
                     VDSDNAVSRVVASVPAGPWAGAVLYSQDARLAGQGMDIHFDRMMWRGMFLKVNAYALN
                     ERTGMSTVASDVNHRWFKHIVLPSVLGGVGNVGSLYKDANTQILQGNYGSITGRVGMP
                     DGEALAGVIAGGMAERGSQLLTRQAESEPYRQVTVSRGEVVSILFVEPVMSNDISTPS
                     SGTAPSESPSSGRPLTQAEAEHQASDRIRAAVLRKQNEMQQRYGIQQESYP"
     gene            15789..16502
                     /gene="traP"
                     /locus_tag="OQQ57_000477"
     CDS             15789..16502
                     /gene="traP"
                     /locus_tag="OQQ57_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraP"
                     /protein_id="HCS1955351.1"
                     /translation="MKNEHEDPGSFGETTAPASGKSFLKRQYMGYSLPVWAGCALIIL
                     VAIWYKFLRTPSEPPADAGFAVTPPAAESWAEPMTMTESGSGNNMPAPPVTPQADMQQ
                     LARDLKAELDRRDEEIRRTLTMLKDSITTLSNAIQKDEAWAQETRQLLEETRKQVHTL
                     QMQGALPAPTGNNRQPAKTLPSPLQGMKIMSVEKGMAWIRWQGSAWAVREGDSLGNIT
                     ITRIDPSSRAVITSAGTLR"
     gene            16502..17029
                     /gene="traQ"
                     /locus_tag="OQQ57_000478"
     CDS             16502..17029
                     /gene="traQ"
                     /locus_tag="OQQ57_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001055571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraQ"
                     /protein_id="HCS1955352.1"
                     /translation="MSIDALTAIENFASGIFSAGMEFLFTWGELLGIIGLIGHLMRAR
                     AEGRRSMGPGKFIAGIFICGMLVSLPSMINAGGTQMGFRADSFAPIAYVQPGSFGAAA
                     GAVNAILSLAKLAGVGFVMNGISIWRKSLLDGHTALSASESISKGNVKFVAGVLLVFN
                     DRVIDATLASLGIAF"
     gene            17076..17474
                     /locus_tag="OQQ57_000479"
     CDS             17076..17474
                     /locus_tag="OQQ57_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001605438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraR"
                     /protein_id="HCS1955353.1"
                     /translation="MSRLRAMAARLRAASVYVQLCLMACRDRLVRLLLLLPVMLLPHT
                     AMANTLFDMIKTVGDGARGSSSSFVAIGQVIGLVLFIGGLLGLKQIGKKPGAGLACLL
                     SILVGVCLAVVPELMGSGQKTLGLSPVSIS"
     gene            17531..17782
                     /locus_tag="OQQ57_000480"
     CDS             17531..17782
                     /locus_tag="OQQ57_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003665769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraS"
                     /protein_id="HCS1955354.1"
                     /translation="MSCELPPFTLLRTEHGNVIARDNRDNQEFVFAECYSTAIAALIL
                     AAVTLYTERKAYEKDPATHRPGPGTMAFPAPATGHGIQR"
     gene            17697..18515
                     /locus_tag="OQQ57_000481"
     CDS             17697..18515
                     /locus_tag="OQQ57_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraT"
                     /protein_id="HCS1955355.1"
                     /translation="MKKTPPLIAPVRERWLFPLPQPDTVFSGEALLPPPVLSTEGRCP
                     CCRRTVTHRFILEDSWPLQQMADTCRDTVVLLEKNLTRVMRLKKRPVPENADEKKKHT
                     RTLQDAERSLAQARLSARRLALRHVEKSQIVTTDALSENESDLLQPEGPPFHLCAFCH
                     AWHCLNGYAAAQGVMVWLPDLHPASVVALNARALQEIFSDNRQRVRQGRAVLNALVQN
                     RLAVEEKFRTWRPADFADALRRWPPAQRKTLREKMDGVALILLPDSFPDKKYVM"
     gene            18570..18929
                     /locus_tag="OQQ57_000482"
     CDS             18570..18929
                     /locus_tag="OQQ57_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955356.1"
                     /translation="MDTLTAGYQFSADAFRRFIIRTLTDDIPPDGDEKEIARFILRHP
                     AFNGGWLLFLAAEIHERSRTHNSITVTVSVDNYLSWMDIAVSGLPELPDMPFCDFFIR
                     RQQFIYPGVPPTKSGEE"
     gene            18929..19309
                     /locus_tag="OQQ57_000483"
     CDS             18929..19309
                     /locus_tag="OQQ57_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000690882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955357.1"
                     /translation="MKIHRISPETLITLIHAHLAGKADSTAKEEHRLLRRFLRDDDGR
                     LAGVLLNIAGILQFNRELSARHNYPATPLTEFSLRKRGKQLHLCLCSLRFFYIPPVFI
                     QNKRRKSIVVHLNKITYKQTHSIR"
     gene            complement(19282..19827)
                     /locus_tag="OQQ57_000484"
     CDS             complement(19282..19827)
                     /locus_tag="OQQ57_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001390888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955358.1"
                     /translation="MKAENKILNLFHATTMSRGLQIIKDGKIRTDAPSVICWSLETTP
                     GWIYLSDQLDNAVHWGNKIACFSKDELFFYIFRVQVQEENCYPDTDDLQYVSWLSPEE
                     AENTDLYTCLSLCHSCRTDKELYTGCEISDYAVLPATTLYTDNSGHPQYDIVNTLKKH
                     IGKDEYNQYESLRQRIEWVCL"
     gene            20052..23096
                     /locus_tag="OQQ57_000485"
     CDS             20052..23096
                     /locus_tag="OQQ57_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCS1955359.1"
                     /translation="MNINRIIFAIEDCISTLSRYSVSAFFPDYCDLHTVIGLDQQDRE
                     RRPWLKAPYIATTKQGYYLSVFEISGALKEMDENPDQTAPGTLESLIAALAERMNTAW
                     KNSGHKISFVFERDPERGRDEIEAMLLPQRKSIARTGILLQDVLDEKVTTLTPWLVRE
                     RCWLTVWSSEELLSRTDRKDHQTRVRKLAEHAPPARFAQDPWRWTLSALKIRHDALLD
                     TLEQALTHDSDGLLIRLMDIHEVGREIRRQLERNSTPAVWQPHLPEDARPAGWRQGGD
                     TSVFHAPSLNLQLFTTQPETHGSLIQAGELWHGMVAITLPPQNLRTFNQLVRDVPRAI
                     PWRIRMDLMPDGMKALGVKKTLLTYSSFIPPLRPMYDSVMMLNDINKHDPVCIMTIVA
                     TTWGNSREVCTRNQALLKSALEGWGVCGTTTTFGDPRRAWVNTVLAASHSSGPIPLYP
                     PLSHALSLFPLNRAGSVWRGQGNLMMHTEDGSAWEVALASSQQNKHTELTPGAPGLGK
                     SVLINALSEIQIASAQKNLPFIAYIDKGFSAQGLVQLIRDSLPEQRKDEAVGIILSND
                     PDHTRNLFDVMYGARKPVTPEKNFMVSVLCALCVDTGTGQPCNPGDTRQIISSLVDLA
                     FREYGENNPRLYRAGTEPLVDLALEESGIAEQHDAGWWNAATWFEIRDMLHIAGNIPA
                     AQRAHYQAMPLLAEMSALLGQPSIRDVFGTVQRDNSEERLLDYIRRALDQGHSDYPMM
                     SGCTRFMLSPDTRVVAVDLNNVAGDKTPAGRLRTGIMYLLAGQIAGGDFVLPQYQEEI
                     RKNLDPRYHEVIFRRIEQLDQEVKTKVYDELHNAKGINFIWEALDTQELEQRKFGIRT
                     VLSTQLLQHYPPAVLKSANTLWLLRYRPDEIPFLRDNFGVPEVTLRRFLKMPEGAAPD
                     GSGVPVLAVFRVKNGTLARILKFTLGPLELWALNSSPKDSALRRALTQEVGSLRARQI
                     LAEHFPRGSATSLIEHRARTHDSENVIHELAAELIRKQGYNL"
     gene            23096..23716
                     /locus_tag="OQQ57_000486"
     CDS             23096..23716
                     /locus_tag="OQQ57_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000286854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraV"
                     /protein_id="HCS1955360.1"
                     /translation="MYSIHITPRCRRPARGQVFLKTLRVDGDSFSFTLPSACFTLRPS
                     PNPRVIFASDRRADGEMSGIRLALPGETGTLITTATWQVNVPERPPFDIQHVIHWLLP
                     APLTALMSDNTWLWPDVPGTPALTAGDWPVMESDTPTLKRVKRRTFTLIDNRNRQGWI
                     TRRFQCFPLAPLPESLSHRVPDILYPPKTEKKECKDNLQPHCLHSL"
     gene            23674..24879
                     /gene="traW"
                     /locus_tag="OQQ57_000487"
     CDS             23674..24879
                     /gene="traW"
                     /locus_tag="OQQ57_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraW"
                     /protein_id="HCS1955361.1"
                     /translation="MQRQSATTLLALLVGCAVIPATHAYSVNVVSSQPVTRQIMPELA
                     TIQGIMEEMVRMQTATGTAITQNSEKLATVIAQDGQATRQQMIFSNETHRLEEARKSF
                     SVPDSICSESASGIAAESRRAAASAAARLSQGGGVSSKPIRERLSRAADSPVREAYDS
                     AGIHAGYCTEAEYARFGGTDVCPAVGDLPGGDSQVRSLYQGAGTADTPAALTWDQKQI
                     DAATAYMKNTARPSAGRAPGKGEVGTQTGRTYVGLQNEYNGIIDAASHPQLSLIADST
                     PNEATRGALTEALQSPSAAAYFDRTASSEARTRGHMSQREFEAFEAGRRYANTDWQQD
                     LQGMEGDNLLRELLRTTALLNWQMNDLKEQIRQGNVIAGQQLALAARQYYGQRLGELS
                     QAMGQGSVR"
     gene            24876..25445
                     /gene="traX"
                     /locus_tag="OQQ57_000488"
     CDS             24876..25445
                     /gene="traX"
                     /locus_tag="OQQ57_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000650756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraX"
                     /protein_id="HCS1955362.1"
                     /translation="MKDDNSIDEKKPAPRLRRIGDIGINLFAPLAETRWMLRSCRHML
                     DQHKTRLKRLMPDRQPESPVCMTWEEAVRASGLTVDELDRRLRRRRMFWRTGFWLMMI
                     PVLLLCGMALAATALPVITLIRILVCLLLMSTIAALCASKALIASYRLWQLNERRVSE
                     DEQGTFPDYLQARHGWKQATWLAITHRQY"
     gene            25520..27685
                     /locus_tag="OQQ57_000489"
     CDS             25520..27685
                     /locus_tag="OQQ57_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DotA/TraY family protein"
                     /protein_id="HCS1955363.1"
                     /translation="MKIIPRALSAGLALAAVPAQAFVTYQDIVSAATNPDDLSRQALV
                     TIFGDVVTNPLTASSNTIIGNLFMVFNAIIATMGIVWFLFIGIRHAVRTGHQGSVFNN
                     GRDVVGILSVVSGFLMIVPTASGWSLAQLVMLWGASIMGIGSANIMVQTAAENIAEGY
                     SMTVQPVHVSTRTAARGILEMELCKHAMNTGLDDFNRTARSSTPPMSESSRTENGRYT
                     VTVSNGSATCGSVSLSVKGNGSNKQSALAHFFNPFIETEYQGVLTAQRSAMDTMLRDL
                     DSAAQEFVSAYRTRRDTGNGNLPDIESRIQKAANRYEETVQKALPADNAETERREQLK
                     SYLTTYGWVALGAWYQTFATANQRLEDLANRAPTVSGVSSLGEAGDTEFLKEVKGAYQ
                     AQLQNSAYTPALGTATSASEYHASKTQDPQSAILKLIGFNLTRMTNWTATYLSGTGTT
                     TNQLNPLIKMKNIGDYTMVTTETIWAGYTTVRVLSTAGSNSVFGRLVNAVSGLSDAAK
                     AFLEASAPPLYFLLFLLFCAGFSLSIYLPFIPFIFWMTGIGNWIVSVLIGCAAGPLWA
                     ATHLGTSQDRGSRAAYGYIYLIDSMIRPLLMVFGFFFASVAIVAGGTILNALYAAALM
                     NVQINSVTGVFSMAGFLMIYARACTTLVAAVFALQAYLPDHVINFLGGRDGVNMLGNM
                     VSSVKDIIAGGNTNMRRTPGVREEKLKNINRDDKDGIKQ"
     gene            27773..28426
                     /gene="excA"
                     /locus_tag="OQQ57_000490"
     CDS             27773..28426
                     /gene="excA"
                     /locus_tag="OQQ57_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid IncI1-type surface exclusion protein
                     ExcA"
                     /protein_id="HCS1955364.1"
                     /translation="MNTTKSRYPSWWAYYYLIRTAYFIFGVPFLLLCSLGFTGMMLTE
                     PYIETDIQAYLYTYGSWLLLILPSLWLYMKTRAKKKKVQQVVQQIKESSPFAPTSDYE
                     QLSFSKSCYFGIDIKNGTMLYVRIYPNNVMDVIGLDIHNFTRTVAEDGKLEIHTTYVS
                     LPMIPLEISGISSRTLANTMHTMAARGYEYKERFPQMIRYRVKEWEKVAGVPVAEVF"
     gene            28700..30286
                     /locus_tag="OQQ57_000491"
     CDS             28700..30286
                     /locus_tag="OQQ57_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001506542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnsA endonuclease N-terminal domain-containing
                     protein"
                     /protein_id="HCS1955365.1"
                     /translation="MSESRSNFPARHGTPWNTEELQRLLVSIAEGVSLKKLTQTHQRS
                     SGGIRGAIKRLLPSEFLEFNDINTVNDLSNYFNKIPRQEHNSIINNLISLSTAKTITH
                     DKVEIQKNSFKQNTPLPLCQPNTDFKDYIADEHDVIMLIHSAIESLSNKRHQYILLMR
                     LGTDDSPHSLADIAVKLGISRERVRQLQERALGLLAAKSRYEGTPGACLKALINSIGN
                     SPYDIAVWIYRIVHRDFVTSSELAAKFIIFAAGIPKARRDEIKNSLSLISQLQKQKLR
                     ERRAELAHAHAQERARIKKERVEFIFSKWLDNTHWPKYIAPPPPVEQLCSQRAVNDTD
                     ISGFFYSQKLGRTVQYESGLEFKIMNLLECCDQVLFYQEQPFSIPYCFKNKSKKYYPD
                     LLIATVDGRCLLMEVKPTDRMTLSLTRIKSNAGRKWAHTRGWGWLVISDRFSLRQLEE
                     HAISTNTWKLIEAELKTSRILAWREMMELRTRYEIHRLDLIAYIIQSGAEVDNFYRIT
                     PKISNNTSNQRQPNESDCHN"
     gene            complement(30424..30576)
                     /locus_tag="OQQ57_000492"
     CDS             complement(30424..30576)
                     /locus_tag="OQQ57_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001618166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HCS1955366.1"
                     /translation="MPQRTFLMMLIVVCVTILCFVWMVRDSLCGFRIEQGNTVFVATL
                     AYEVKR"
     gene            30906..31148
                     /locus_tag="OQQ57_000493"
     CDS             30906..31148
                     /locus_tag="OQQ57_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955367.1"
                     /translation="MKDEIHSTSINPDVVEQFLALMNTHCKSSEEALTMLSTLCYNLM
                     MTCGIHSMDSQMLNGHGISMQLQGIDIAEKPGKNIH"
     gene            31439..31807
                     /locus_tag="OQQ57_000494"
     CDS             31439..31807
                     /locus_tag="OQQ57_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001456887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955368.1"
                     /translation="MKDNNTTATPETWKMRFLANGTSGTWFYTDDIAVTDAWLRAHPD
                     DVEVIPLCRIQPRQHSHEQHIEELRAALARMLHMHHMMLETTHYRENITDARCIREMH
                     EAPLQALNILSRYPHKKDEV"
     gene            31811..32026
                     /locus_tag="OQQ57_000495"
     CDS             31811..32026
                     /locus_tag="OQQ57_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955369.1"
                     /translation="MWLLIFWLSSPFNVSSGDARQPTLAVHSQAFHTERACRDALRAI
                     KKENVGEFSLRGVCVSDGNTKEEAESS"
     gene            complement(32224..32847)
                     /locus_tag="OQQ57_000496"
     CDS             complement(32224..32847)
                     /locus_tag="OQQ57_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001466373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1955370.1"
                     /translation="MQEHIDYQIEKYQFRARNESPRLMRQWEDVMRECHDTGAGARER
                     LRIALLNVDYVTSFELPFRLLLTRTPQMIDSVRREWQLSQKKVVFNERQRGCVYSLQN
                     DLSGVPDSFSYSLATRIRRADSYGMTTRCFTDIAGQVKAPTARLKLALESGLIVTALD
                     GLFWLGIQRIAADVQRLRQSGMTIITRDVEVSDSLTGTTRVVSGYSL"
     gene            33005..33472
                     /locus_tag="OQQ57_000497"
     CDS             33005..33472
                     /locus_tag="OQQ57_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000598960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HCS1955371.1"
                     /translation="MIKYIFSLTIIFSASLCAAQIQGHVIRVLDGDTLEILQDKKPVR
                     VRLANIDAPEKKQPFGRWSATQLKDLVAGKPVTVQYAQTDRYGRILGRVYTADGTEAN
                     RWQVRNGAAWVYPDYNNDYTLPPLQRDARALKRGLWADKNPVPPWTWRKQNKK"
     gene            33622..33798
                     /locus_tag="OQQ57_000498"
     CDS             33622..33798
                     /locus_tag="OQQ57_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001054900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955372.1"
                     /translation="MNLVDAFVTKVISGPYEEYGKWWVDVEYISWGVPGKSRLMFDSR
                     EQAQEVQEGFRFLT"
     gene            complement(33858..34112)
                     /locus_tag="OQQ57_000499"
     CDS             complement(33858..34112)
                     /locus_tag="OQQ57_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001081066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955373.1"
                     /translation="MNRLQVLAKTSGGAGFGALAGEELSITDTIENVATGNVRANHGV
                     LSPLMEKRMINLLIIVLRAVVAVANAVIALLELIRELVDL"
     gene            34753..36060
                     /gene="trbA"
                     /locus_tag="OQQ57_000500"
     CDS             34753..36060
                     /gene="trbA"
                     /locus_tag="OQQ57_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TrbA"
                     /protein_id="HCS1955374.1"
                     /translation="MSYQHSPTTEDPMNIWYIVGTICLLFALLIWLFLPDIVFATCLI
                     LHTMWGMTDWGPFHHFAAPRYNLLANTANNAATITFSQWLDVMSQTVGILWLILLPMT
                     IGFLWMWFQHPAQPRFTRRPLNIHTLPHLFSSLSPAIAPVLADGDSNRLFHGQKRPER
                     RVALTPEAFVEQNNLIRNMQLDVAATRQCFMAQLGQPLTTWKDMAPHEKALFAVFGLQ
                     FFLGDRKSAVSLMNNLNLSCRLKSKRDQGRFSTPVYSLARNAFIRVIKTEDAQQWLRQ
                     HRYVRSGLVWLYAHDLRLTPPNWLWLKGVDRTLFYALHRANTTKGFIEGAGVVAVARA
                     ENEASRLGLPCPEPCVEEAIEGLRRDMLGLGLIWDEPQPDRDRKRQIRTRWSLTDDVI
                     PRRHDNDEDTDTGETTETTETTETTETTETTEKQHPADKEKEQ"
     gene            36057..37181
                     /locus_tag="OQQ57_000501"
     CDS             36057..37181
                     /locus_tag="OQQ57_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004031782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HCS1955375.1"
                     /translation="MTIHYTATLNNKHLSLTALYPDGNREVIAILPVTELGALINRNN
                     RLMHLSFSSPFREITETVLVDTVDAERPGHHIGRMLSAIDACLEAEYAGKGKHPSRKN
                     GFWRTLMCGFIAGIALPATVAGYHWMKAEPPSTLAYPTSQEWRAEPVTDTETPRPHTE
                     HHVNSIPARPAPTQQEPSSAPAPTAVTEEQHVQAAEARRNLATVLKRNADRGMFTINL
                     STGHERTLYAFLDPACINCRLLEPALKQLAREFSVVIYPVSVIGGESSTKRTAPLLCE
                     PDSQKRATGWHQLYSADSGMAPTGDAPAAQDGQCLTAARAAIDVNNQAFRQFGFGGTP
                     WVLSDTGWHLPSGILKDATSVRLFLKATDSEEYHNEPAPR"
     gene            37162..39465
                     /locus_tag="OQQ57_000502"
     CDS             37162..39465
                     /locus_tag="OQQ57_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraM recognition domain-containing protein"
                     /protein_id="HCS1955376.1"
                     /translation="MSQHHVNPDLIHRTAWGNPLWNALHNLNITGLCLAGSIITALIW
                     PLALPVCLLFTLVTSVIFMLQRWRCPLRMPMTLSLDDPSQDRKVRRSLFSFWPTLFQY
                     EADETFPARGIFYVGYRRINDIGRELWLSMDDLTRHVMFFATTGGGKTETTFAWLLNP
                     LCWGRGFTFVDGKAQNDTTRTIWYLSRRFGREDDIEVINFMNGGKSRSEIIQSGEKSR
                     PQSNTWNPFAFSTEAFTAETMQSMLPQNVQGGEWQSRAIAMNKALVFGTKFWCVRERK
                     TMSLQMLREHMTLEGMAKLYCRGLDDQWPEEAITPLRNYLQDVPGFDMSLVRTPSAWT
                     EEPRKQHAYLSGQFSETFTTFAETFGDVFAADAGDIDIRDSIHSDRILIVMIPALDTS
                     AHTTSALGRMFITQQSMILARDLGYRLEGTDAQTLEVKKYKGRFPYICILDEVGAYYT
                     DRIAVEATQVRSLEFSLIMTAQDQERIEGQTSATNTATLMQNAGTKFAGRIVSDDKTA
                     RTVKNAAGEEARARMGSLQRHDGVMGESWVDGNQITIQMESKINVQDLIRLNAGEFFT
                     VFQGDVVPSASVYIPDSEKSCDSDPVVINRYISVEAPRLERLRRLVPRTVQRRLPTPE
                     HVSSIIGVLTEKTSRKRRKKHTEPYRIIDTFQDQLKRTQTSLDLLPQYDTDIESRANE
                     LWKKAVHTINNTTREERRVCYITLNRPEEEHSGPEDIPSVKAILNTLLPLEMLLPVPD
                     LTASPPHKKNVAQTPSGGKQESRKKRF"
     gene            39932..40162
                     /locus_tag="OQQ57_000503"
     CDS             39932..40162
                     /locus_tag="OQQ57_000503"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955377.1"
                     /translation="MKTNMGSTKNGARVPHVRNRFTSMDIGMNSQILPDMLINFALIN
                     ITDRKNEGTNTIDGNWQADERRRYRDNVRIYF"
     gene            complement(40260..40691)
                     /locus_tag="OQQ57_000504"
     CDS             complement(40260..40691)
                     /locus_tag="OQQ57_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tolA family protein"
                     /protein_id="HCS1955378.1"
                     /translation="MVLRSIWIEEQYMGVKKIVMLAILVSFVAGCAPLHPSNCHKTTA
                     LGSCSSGRWDDQDEWGEQARGIRDAINAKLDDPQKWKRKKCRLHMEFSRDGTALKIST
                     SNGDKAYCEAIKSAAHKAKFPAFNNPEVYRDFQKSGFDMRG"
     gene            complement(40759..43470)
                     /locus_tag="OQQ57_000505"
     CDS             complement(40759..43470)
                     /locus_tag="OQQ57_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000991381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HCS1955379.1"
                     /translation="MNAIIPHKRRDGRSSFEDLIAYTSVRDDVQENELTEDSEIKSDV
                     PHRNRFRRLVDYATRLRNEKFVSLIDVMKDGSQWVNFYGVTCFHNCNSLETAAEEMQY
                     KADKAVFSRNDTDPVFHYILSWPAHESPRPEQLFDCVRHTLKSLELSKHQYVAAVHTD
                     TDNLHVHVAVNRVHPETGYINWLSWSQEKLSRACRELELKHGFAPDNGCFVHAPGNRI
                     VRKTALVRERRNAWRRGKKQTFREYIAQMSIAGLREEPAQDWLSLHKRLASDGLYITM
                     QEGELVVKDGWDRAREGVALSSFGPSWTAEKLGRKLGEYQPVPTDIFSQVGTPGRYDP
                     EAINVDIRPEKVAETESLKQYACRHFAERLPEMARNGELESCLDVHRTLAKAGLWMGI
                     QHGHLVLHDGFDKQQTPVRADSVWPLMTLDYMQDLDGGWQPVPKDIFTQVIPGERFRG
                     RNLGTQAVSDYEWYRIRMGTGPQGAIKRELFSDKESLWGYTTVQCESLIEDMIAGGNF
                     SWQACHEMFARKGLMLQKQHHGLVIVDAFNHELTPVKASSIHPDLTLSRAEPQAGPFE
                     IAGADIFERVKPECRYNPELAASDEVELGFRRDPVLRRERREARAAAREDLRARYLAW
                     KEHWRKPDLRYGERLREIHAACRRRKAYIRVQFRDPQLRKLHYHIAEVQRMQALIRLK
                     ESVKEERLSLIAEGKWYPLSYRQWVEQQAVQGDRAALSQLRGWDYRDRRKDKRRTTNA
                     DRCVILCEPGGTPLYEDTGVLEARLQKDGSVRFRDRRNGELVCVDYGDRVVFYHHQDR
                     NELVDKLNLIAPVLFDREPRMGFEPEGSYQQFNDVFAEMVAWHNAAGITGSGHFVISR
                     PDVDLHRQRSEQYYHEYIRQQKSISGGHGASYAPVQDNEWTPPSPGM"
     gene            complement(43482..43814)
                     /locus_tag="OQQ57_000506"
     CDS             complement(43482..43814)
                     /locus_tag="OQQ57_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nikA protein"
                     /protein_id="HCS1955380.1"
                     /translation="MSEKKTRTGSENRKRIVKFTARFTEDEAEIVREKAESSGQTVST
                     FIRSSSLDKVVNCRTDDRMIDEIMRLGRLQKHLFVEGKRTGDKEYAEVLVAITEYVNA
                     LRRDLMGR"
     gene            44047..44382
                     /locus_tag="OQQ57_000507"
     CDS             44047..44382
                     /locus_tag="OQQ57_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000157082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobC"
                     /protein_id="HCS1955381.1"
                     /translation="MASKKFYSDDDIQLAKAALSELPDLTAQRKTLRDFLDAIRDDII
                     VLVRTKGYTLADVRNTLKNAGYEVGEKALRDIIREAESKKPSRRSSSKTAPKKTDSGR
                     KDGIDMNNN"
     gene            complement(44468..45316)
                     /locus_tag="OQQ57_000508"
     CDS             complement(44468..45316)
                     /locus_tag="OQQ57_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HCS1955382.1"
                     /translation="MNQALPTADLNTAGTTDVIPSVAIDRIIAQRNEGIALFMQAMEC
                     LATARRILLDASGDIFLYGFEDCVTDSVRCMDKPEEAKRNIIRLADRKIWDRLMTDTG
                     MYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFRHLNASKMQTFEQGLIDVYRKLSW
                     DYRTNNPCRLGKKIIIENLLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRN
                     SIGAQYGEFLGNGDNVGKLLEGEYFTVRGYQKGTVHIVFKRSDLVEKLNDIIARHYPG
                     VLPPRV"
     gene            45895..46146
                     /locus_tag="OQQ57_000509"
     CDS             45895..46146
                     /locus_tag="OQQ57_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003980153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HCS1955383.1"
                     /translation="MTGWELRIWRKSMLWSREKASREFGITQRTWHAWENAEQVDVTV
                     WRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAEDV"
     gene            complement(46177..46446)
                     /locus_tag="OQQ57_000510"
     CDS             complement(46177..46446)
                     /locus_tag="OQQ57_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014358130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955384.1"
                     /translation="MRTTKPGKIPGFFVSRSRANSMTIAERLIQKGFDEGFKEGFKQG
                     FKQGVLEVAREIACRLRDIGWPPERIQEVTGLSGEELKKLFPDEQ"
     gene            complement(46446..47384)
                     /locus_tag="OQQ57_000511"
     CDS             complement(46446..47384)
                     /locus_tag="OQQ57_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HCS1955385.1"
                     /translation="MSKKKNTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCD
                     LSTLKLEPATFVEPDLHQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRY
                     SVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTKPFPLV
                     DITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIV
                     NAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGRMEGRMEGRMEGRMEGAL
                     EKALAIACQLQKMGMTPEQIKQATGLSDDELKKITH"
     gene            complement(47381..47770)
                     /locus_tag="OQQ57_000512"
     CDS             complement(47381..47770)
                     /locus_tag="OQQ57_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CbiX"
                     /protein_id="HCS1955386.1"
                     /translation="MKSCFDTDKAFHMSFDEVTFNADRIRSKLELLSEELMPRCGLVY
                     ELYQRRLSAAIDNFVATLPTEQHLLVLELAREEFDYLSAEEIAEEIRRDSERGYCCHG
                     FERNCCPLGCGDLGDDCCDAADLMEEP"
BASE COUNT        12018 a        13411 c        11868 g        10567 t
ORIGIN      
        1 ccaaaaattc caggggcagt atacaggtac tgactacgtc aaaatcctga ccgaaagtgg
       61 tggcctgcct gccgatatga tcgccggtgg taataaggcg aaaaatgcct ggggtggtgc
      121 ggtaaccatc aaagtcagtt cagataaata ctcctacgtt attgaatcca gcaatgtgcc
      181 gaagaaaaac tgtattgatc tggtcaccag cctgcgcagt tcatccatgt ttacaaaaat
      241 caacggcaat gtgacgaata aagttgaccc gtctacagta tgtaacgcag ataaaactac
      301 tatcaaactg gaaaccaaca gttaatcatt catcagcgcc cgcccgggcg ctttatttaa
      361 ggtcactgta tgaacaggtt atttatcctg acagtgattt tttcactgtt atgctcactt
      421 ccttccgcac aggcatcccc acaggacaaa caatatgatc gttgttttat taccgccgga
      481 aaacgttatt ccattgatcc aggattactc aaaattattg cccgcaggga aagcagtctg
      541 aatccccggg ccattaatca taacaggaat gacagtggga aaattatcag taccgattac
      601 gggataatgc agattaactc cacacatatt cccgggctga aaaaaatggg cattatccgg
      661 agtgagaaag atctgttgaa taatgtctgc ctgaatattc agaccggagc atggatcctc
      721 gcccggcatt ttcagcgatg cggcgtaaac tgggaatgcc tcggcagtta taacgccggc
      781 ttcagtaaaa gtaacactca ccgccggatg aaatacgccc ggcagattta cagcgcttac
      841 atgcagggac gttagtccgg gagaactgcc atgctccaga taatcccggc actgctggtc
      901 gccataaccg tggtaataca gtgtctggcc gttcagatga gtcgctatcg actctcccgg
      961 atgaatgccc gcccccctca ccatgggctg gcgctgatga gcgggatgct tgcagctgcc
     1021 gccattatcc tgcgtcttta tcagaatgac agcgctgtcg gggtgctgtt tatgacgata
     1081 atgaccggat gtatgacact gatgaccctg acggatgctg catcctgccg tcttccccgg
     1141 cccttcacca tcatgtatct gataagcggc agcgcatttc gtctctggca gggagactgg
     1201 ctgacaggcc tgtgcagtgc agggttctgg ttcctgctgt tgcttctgtt caggcaatac
     1261 acctcttacc gcaggaaaac agaaaccata ggcctgggcg atgtttttct gattgccggt
     1321 attgccatct ggtccccgcc gggagacatc ccctggattg tcgcaacggc agcaggcgga
     1381 gccttacttt atctgtggtg taacagacaa cgacgcatta ccagagaact tccctttggg
     1441 ccgtttctct gcgcgtcaca gtacgcattt actttttatc ccggtggcct ttggtaatac
     1501 cggagggaac gactatgcaa aaagacaacg ataaaggttt tgcacttctt gaaattctgg
     1561 gaggactggt tgtcatcagc ctgctcatgc cgctgttctg gtcttacatt gaagactacc
     1621 tgaatgaaat gcgcaaccag agcgccgcat ttcatgcaga tgcctacaat actgcagcca
     1681 ggacctacat cgccgataac aatgcccgcc tgcatagcgg aacgcttcct gccaccttca
     1741 cggcggatga gttaatccgg aaaggatatc tgaagggtct taaccgctcg ccctttgggc
     1801 agagttatac caccggcatc cgtcgtaaca cgagtaccgg tcgtctggag gccctgacct
     1861 gctccaccgg aggggagaat atcaaagacg atgccctgcg cagtatcgcc agcctgctcc
     1921 ccggtctggg cggatttata ggaaaaaatg gcacagcaac cggtgttttt ggtggatgga
     1981 cagataaacc cggcgactat ggactcagct gcaatggcgg gcacatcgcc atcgtaatga
     2041 tgggtgatga cctgcaggaa agcgatcgcc tgtatcgctt tcaggtaccg ggacgaccgg
     2101 agctgaacca gatgaacacg gccatcaata tgggagggaa caacctgaac aatgcaggaa
     2161 acgtcaatgg acaaagtgca acactgaaag gtgatgttac aagcgaaaac ggctggttaa
     2221 tcaccaaaaa tgataaaggc tggaagaaca tcacctatgg tggcggtttt acgatgacag
     2281 acagccagtg gatacgcgca gtcggtggta aaggaattat aaccacaggg gaaatcaaag
     2341 gaggaaaagt cagtgggggg acagtccggt ctgacggtcg cctttccaca ggtgagtatt
     2401 tacagctgga taaaacagcc gtagcaaata caaagtgttc accagatggg cttgtaggcc
     2461 gcgacagcaa aggggcaata ctttcgtgcc aatccggtgt gtgggttggc tttgaatcct
     2521 accctgtggg aagccctatc ccgtggccat ctgccactcc tccacaaggc tatctgttga
     2581 tgaacggcca gtcgttttcc tgttcccggt atcctcagct tgcccgtgct tatcctagct
     2641 gtaagttacc cgatctgcgc ggtgttttta tccgtggctg ggataacggg aagggacttg
     2701 atggtgatcg gaacagacag ctcctgagtt atcaggccga tcaatcaggc gtctatcacg
     2761 aacgtggcgg atggctgaaa gggcatcata gtggtatgcc atactgggca caggggagta
     2821 ccacagaaat gcgtcccaaa aacattgcat tcaactacat tgttaaagcc agctagggac
     2881 tcacatctga taggcataca cagagaaaac accgttacta caggcgtaat tttgtgttgg
     2941 tctggagatg atttgatatg acgctcccac tggcacggca aatgaaataa atctccgggc
     3001 atatcagctg gtcagcaaac tcgatgccag gcgtaaacag accagcaaaa tttcccctta
     3061 ttttgttccc taccctgcaa ctgtcgggtg cagaaacggg ctgtttgtcg tgacactgca
     3121 cgatttcgac cttgaaaccc gtgcagaaac ccggggactg gcaatatctc atgccagcat
     3181 gctcagtcac ctcctgtccg aatccttttc attcgccctt aaaacagagt tacaaacact
     3241 cttgaaacac actcgatcat aacgatcgaa ataactcgct tccgtttaaa aaacactctc
     3301 tttagactca atttatgaac aaaacacgct gacccgcatg gaggtgaaat gaaaactgac
     3361 agcacaggta ttgccgcccg tatgatgctc tccctggaca gggagcgaat ttgcgaatgc
     3421 ctgctcagtc atcgccagct gcagtccaca cccctgcagg ttcgttatcc gcagggagtc
     3481 agggatgccc ttggtatcat gagcgaacag ctttctcttt ccgtctctga cctgacgcgt
     3541 atcctggtcg aagacgcgtt aagtgaaatg tttcttcctg cagataacat cgtccgccgt
     3601 cttctcagca ggatggagca catcatgcag gcacatgata tcagcgcaac aacgatggct
     3661 gcattactgg ccccctggaa tatccgccct gccgtcttcc gggagccgga cagactcact
     3721 gactatctga ccggggagat tcttgcagca ctggctgact ggttttatct cagtccggaa
     3781 tggctgaacg gcagggtgca ttatccactg tatcgtccgg gagactggcc agccacacag
     3841 gagatattct gcaggattat ttcagcccgc gagaatatgg acattattct ctggcatggt
     3901 tttccgtttg ccggaacgca ttccggagaa tattgcggcg ttctgctcag gcagaaaaaa
     3961 gaaattaata acaccattat ttatccggta ctttcgttat atccggtcag aatggatata
     4021 gaaaaagaag gctggtttca gatggcccga aaaatatctc cggatatccc tgttcgcgcc
     4081 gtaacactca ctccggcaca ggcagaatat ctgataacag gaaaaatatt acccactgcg
     4141 ttattcaggg ttccgttatc cccctggtaa taatactgag caataaaccg gaataataca
     4201 ccaactgttt ttaatggcac agccgtgccc tctgttgtta tacccaaaat acctcaatac
     4261 aggaaactga aatgatgatg aaaaagcata ttacccgtac tctcatcgcg tctgccgttt
     4321 tattttcctt taattcgact gcagcaacgt catattttga agcccgcaat gatgcgatgg
     4381 gaggaacggg ggttgcctcc tctcactatg gtgtggcccc actggcaaac ccggcactgc
     4441 tgacaaaatc cggtgcaaaa gatgacttca gtcttctgct tccgtccgtg ggtgcgcagc
     4501 tgtccgatcc gggtaatatc gccgacaacg ccgacaaaat cagcgatgac tggaaagcct
     4561 tcgaccgtgc cgtcgacagc cactccgggg taccgcagac agcggcccgc ctgaaagaga
     4621 gactgcagga cttccggaac acccatgcca gcgcacaggc cggggtatct gctgtggcgg
     4681 cccttcccgg tgataccctc gctgctgcac tgatgctgaa aacgttcggg actgtcagcg
     4741 tcgacggtaa agtcagcgat gccgacctga actatctgga aagcattgca gacagtggca
     4801 gccaagatgt ggataaaaac agactgacct cacaggcttt tgcccgtgcc gcactgatca
     4861 ccgatgtggg cgttgcgctg gccactgaac tggaaacggc cggacaaaaa tggtcactgg
     4921 gcttcacacc aaaattccag cgtgttgacc tgtttaacta caatacgctg atcaaaaact
     4981 atgacagcag cgcattcaaa ggtgaccgtt accacaacac ccaaaacggt attaacgctg
     5041 atatcggtgc cagcatggac ctggatgaca actggacgct gggtctggtc gcacagaacc
     5101 tgatcccacg cagcattgag accaaagagg tacatggtgt cactgaaacc ttcaggatcc
     5161 gtccgcaggt aacgaccggc gtatcatggc acaacgacat gttcaccacg gcactggatg
     5221 tggatctgac cccggccagc ggcttcacat cagacagcaa acgtcagttt gccgccgttg
     5281 gtgctgagtt taatgcctgg aaatgggcac agttacgtac cggttaccgc cagaatctgg
     5341 tcagcaacaa cggcagtgca ttcactgccg ggattgggct ctcaccgttt gatgtgattc
     5401 acattgatgt cgccggcctc gtgggcaccg acaacaacta cggtgccatt gctcagttac
     5461 agttcacctt ctgattatca cgccccggga cgcccggggc ttctgacctg aatctgctcg
     5521 tttccgctct tctggccact caccgccagt cctgttcatt attttccgga taaaaccatg
     5581 caaaaaaaac gtatcaccct tgcaggggga gttgccatgc tctgtctgag cggctgtcat
     5641 cttcccccgg ataataccgc accggccagg aagtacggtg cagcttctga agtcgctgtc
     5701 acacgacatg cacagtatca gttgtgggag cagggcacgt attctgcagc cctgccttcc
     5761 cgccagcccg gaggcagcct gcaggctcac agcgggcggg tttcctttga ctgggaaggc
     5821 gatgctctgg agctcctgag cgagctggcc cgtctgcgcg gacaacagtt cagttacagc
     5881 ggcgtgcgtc ttcccctgcc cgtctcactc catgtacgcg atatgacctt cgctgatgcc
     5941 cttcgtctca cagaggccca gactgcctgg cgggcagtcc tctcacagtc agccgggcgt
     6001 ttacatcttt cctatatgcc aacggagaaa aaatgaaaaa acaggtctgt ctcctgctgt
     6061 ccgggctcct gctggcaggc tgtgccggac agcaccatcg cccccctgcc ggtatggcag
     6121 gcaatttacc accgccggat ctccgggcat ggctgacgcc cactgacaac caggatgacg
     6181 acatttcaga cacccgtcgc cagatgctca cggacgccgg acgaacgctg ggattccgtg
     6241 gcggaaaagc acagcgctca tgggaactga ttcaggcact gaatgcacgg gaaagtacac
     6301 tgaatgccct gtatgacttc cgtcccctta tcagcaagga aggctggcta ccccctgtta
     6361 ttgatgaagc gcaggatgtt gctcacattc agcctgacca gataagaacc gcgtcccgtg
     6421 tctggaccat cctgcgcccc gaacgttttg tcagtaaccc gccgggctgg cgtgactggc
     6481 ttctgcgggg gctttccact accgccaccc cgggaactga gggccgtgtt gtaccggaag
     6541 accgcgcaca gcgcagactc tgggaaaacg cactccgcca gggctggcag gaaggccgtg
     6601 acaacgctga cctcaccctg gaagccaacc agaaacgcct gacccgggat taccggggaa
     6661 tgatgcttta tgccctgctc tggcgtcagg gcatgatcac acgcccggat gtgactgaac
     6721 agcggcagac cgtcaccggt aacggcagga aactcatcac cggagaccac gtccgccgtc
     6781 tgaagacaca cgcggaattc accctgcaga aatcacgctg gcgtccggtc gtcagcacgg
     6841 aaggagcccc cgatgaaatt acccgatgag ttcggcacat tccctttcgc ccgtttcacg
     6901 gccgaagagt ttcgctattt ttttgcctgg tgtgcccgac accgcgtcag tgatatcgat
     6961 ctgacaggcg gctcaccggt atctgtcagt cgctttggac ggcgggtacg ttcgtccgca
     7021 catcctctgc cgtcctccat catgatggcg ctgagtgatg aattgtttgg acgggaagtc
     7081 cttccccggg tgctgtccgg tcatcccgtg gaccgtacca ttcaggtcag cggtgatgcc
     7141 tccggtcgct acggtctgca acgagggcag cgtgttcgcc tgcgctgtca tctgattcag
     7201 ggaacatcag caacagaaga aaaagtaatc tccgtcacca tgcgggtgat cccgtccgat
     7261 attccggaca tcctcaccat gaatattgaa ccggacctgc tggatgccat gctccggaaa
     7321 accggtctgg gtttcatctg cggagagacc ggctccggta aatccacact ggcagcggca
     7381 ctgtaccgct acattcagac gcatttcccc gaccgcaaaa cggtgaccta tgaagatccg
     7441 gtggaataca ttctgggggg agagaatgac cttctgccac cccatcaggc cgaaatcggg
     7501 cgtgatgtgg aaagttttgc ggcaggactt cgctctgccg ttcgccgtaa cccggacatc
     7561 atcggtatcg gtgaaatcag ggattatgaa acggcagatg cagccgtcca ggcaggtaac
     7621 accggtcact tctgcatcgg caccatgcac accaaatcac ccggtgaaac ctttgcccgg
     7681 ctgctggggt tatttccacc ggaaatcagg gattcaatgg cagccgccac cctttccctg
     7741 gtgcagttca ttctggtgca ggtcctggtc agaacaaatg acggtggcag acaggccgtc
     7801 cgggaataca tcgtcataac tgacgaactg cgtgatacgc tctcccggca gtcccatgcg
     7861 acatgggggc attacattga tgaaatcatt cgcaaggaaa aacggcggat acgggatcag
     7921 gttctgacca tgtatcagac gggcagcatt gaggcatcag aagctgcgct cttcatcccg
     7981 gccggagaat tccccaaatg aaacgcgaag gcttctggcg ggatgtcact ccgccactga
     8041 atatttatgg tgtcccgttg ccgtttacca tgatttacct gctgctgttt ccgtatccgt
     8101 caaaaacaac attctgggtg tgcagcggca ttctgctgtt ttttgtgctc ctggggtact
     8161 caggatggac tgtccggacg ctctgccggc gtctgtacag cctggtgcag ggtaaacagg
     8221 cgtcaggccg tccctggtgg taccggcatc gcacagaatt accccgtgaa tggcgcggaa
     8281 cggaataacc ctcttttgtt catcatcccg gcgtatcaca acgccctcat ctttaatccc
     8341 cggagaacga catgaagtcc agatatcgaa cctggcttgc tgtcccgcct gaggagacag
     8401 aagccgtaaa aaatgcagtt cccccgttaa atggccgcaa agctgtcgca tgggatccag
     8461 aaaaaaagct ctggtatgcc cgggcgggta ccgaactttc actgctggag cgctggttac
     8521 cccggccaca ggaactgtcg atggatgccg gcgatccggt cactgaattt gctcaggtcc
     8581 tggaaaacgc cgggctggtt attcagggat tgccacagat ggacggagcc atacacagag
     8641 tggccacccg ggatgacaaa aaaggggcca aaagtggcgc atacagggcc tatcttgatg
     8701 gtcgtcccgc cggctggtac cgcgactacc ggagcgccga tgacagtccc acaaactggg
     8761 tattttccgg cggagaacaa cacgatcctc tggccagact gcatctgcgg gcattcgctc
     8821 agcaacagcg cgatgataac gctcgtaaac tgcagcaaca gtataacaaa caggccggct
     8881 atgcccgctc ctatattaac gggttgccac aggcaacagc acatgaatac ctgacgcgca
     8941 agggcatccg ggccgcgcct ggcgtgcggc tgaacaataa aaatgagctg gttattccct
     9001 tcagcaacgg ccggggagaa atacgttcgt accagcgtat tccggtcacc ggcgggaagg
     9061 atgcccgcat tctgaaagac tccgagaaaa ccggcaactg gttcaccttc ggaaccccgg
     9121 aaaatggccg ccccctgtta tttgcggaag gttacgctac tgccgcctcc ctgcacgaag
     9181 caaccggcct tccggttctg atgacagttg atgccagcaa tatgattgcc gtggcagaaa
     9241 atgcccgcca aatctggact gacagcccct ttgtcttctg tgccgacaac gatcatcaac
     9301 gggaaattaa caaaggggtt tttagtgcaa caaaggccgc agaagtcacg aatggcgaag
     9361 tcattattcc ggcctttacg gaggcggaaa aagcacaggg actgaccgat ttcaatgacc
     9421 tggacgccag ccggggacgg gacaactttc agaatgccat gaatgcacag ttaaaacata
     9481 tcggtatccc cacacccaac agtgacactg ccgaccatcg tgaggctgtc gtgatcgaca
     9541 acctgatatt cacaccggta aaagatgaga agccacaaat gtcccctgaa aacagacaga
     9601 gcacagcccc ggaaacggag ctggcgacac aggatacgcc ttatgacacc cactccgacg
     9661 atacagaaaa ccaggcatat gaagatgact atgccgccta tgcatccctg caatcagtaa
     9721 ctgcggagac gttatccccg gataaaccac tggagaatat tgcgtctgcc gctgataccg
     9781 gcacagagaa tacctctgtg cctaccgctg gcgaccagga agacctcaat acagacgcca
     9841 caggtacaga caccgctcac aacagcgaca cagcagaaac aggaacgctt cctgaacctg
     9901 ccgggatgca gtccgtgcag caggcaacca ctgaaccgac cgcagaagat aaaccacacg
     9961 agaacgttgt ttccgctgcc gataccagag aagaaaatgc ctctgtggct accgctgata
    10021 ccggtgaaga aaatgcctct gccaccaccg ctgacaacca gagcacgcag gcagaagaac
    10081 atccccggag tgaagacaca ccggaaacct ccctctccga cgcggccggg acacagcaca
    10141 ccaccacaac gcagtctgaa gaacaagtgc aggtttccat ggccagcgct gacgactgga
    10201 gcgcatttgc ggaagatctc aacgctgaca ctccgggggc ccccactgtt cacaacaccg
    10261 acaacgcgga gacaaacaca gtttctgaac cggccgggat gcggccagtt cagcaggtga
    10321 ccactgaact gacggcagaa gataaagcac aggaaaagag cgttgcgtct gccgctgaga
    10381 ccggcgcaga gcactcctct gacatcaccg atgacaacag gaacgcaccc gctgaggagc
    10441 tcaatgccga tgccacggtt gctgttcaca acaccggcac agcagaaaca gcctcacctt
    10501 ctgaacctgc agaaactcag ccagtccggc aggccaccgc tgaaccgacg gctgaagata
    10561 aactgcagga agagcgtctt gtgtccgcca ctgagaccag cacagcgaat gaagcagccc
    10621 gccctgaaac gccatcgctt ttcagccgtc tgcgccgttt tctgaccggt gggaaatcac
    10681 gcacctcaga accttccgtt attcaggaga aaaagcccac ggaggctgaa acagcaacag
    10741 aggaggtcgc accaccatca ccaccggaaa ccagcccgga agacacatcg tcagcggaac
    10801 cggacacgat tatctttgca ccccgccgtc ccgacagtcc gcagcggcac aacctggacg
    10861 agatccttaa aaatcttaca cacaaagagt ttcccgacag gactgcgctc tacagcgttg
    10921 acggtgaacc cgccttcctg gacagactct actgtctcga aatggtggat ggcgccagcg
    10981 cggatgacaa aaaggtcctg gctgcccttg ctgtggccac caacttctat ggcggcgtta
    11041 tcgagctgac cggcagtgat gcctttaagc aaaaagccat gcagctgatt gtcgaatacg
    11101 acatcaaggt tcgcatgaaa ctcccggccc agcgggcagc actggaaaaa atccgcaagg
    11161 aaaaagagat ggcgcatgat gccattgtca cccacagacc cacgccggaa ctcaaccgcc
    11221 agtcaccgga agagacaaca atggcccaac cggctccccc tgtatcaccg aaggcagagg
    11281 ctgaacaaac agcaggcagt acggctgaaa caccgcatcc ggaagcgccg gtcacggcaa
    11341 aagctgaagc cccccgggcc gacagaccgg aacaacccgc cgccccgtcg tctgcgccag
    11401 aaaaagcccc tgtcagtgca cagccgcagc aacccgacac accggaggaa gagccgcccg
    11461 gcaagctcag ccccggtgaa agtgtgactg ccgtcctgac aaactacgga gaaaaagagt
    11521 atgcgcccgg aaaagggcgc tgcttttttg tggaactcac caaccgcagt ggcaaacggg
    11581 aatactgggg aaacggcctg gaagaactgg tcaaaaacca tcagaagggt gaccccgtca
    11641 cactgacact gcaggcgaga gaaacattcc ggctgtccgg tgaaacgcgg gatcgtatcc
    11701 gtaatatctg ggccataacc ccggtcagta acggcattac cgttaataat gaccaacctc
    11761 atgcgggtca gcataccctg gagtttccga tggcaacatt cagccaggtg atgttacaga
    11821 tgcaacaaca ctggccacag ataatgcagg aagttcgctc ccccaaaaat cctcccaata
    11881 atctgtacat tggtgaagac aggcaacctg catcagcacc tcaggatcaa tcaatgcgac
    11941 tccccctcgc tggtaatgcc cccaatgaac tgataccagc catcgcctct gccgataagg
    12001 acaatcgtca gttgaatctt ctgctggtcc acagcgcaga tgatcatctg cagggcgtgg
    12061 tccgcctgaa cggcaccctt tacccggcac tggccacccc gtcagctgac aaccgtcagc
    12121 tggttatcaa tgccctgacg gataacggtc tgcagtttgc cggttacggt gaagctgtta
    12181 accatgatga gaataatcat cagcgtccgt ccccacaaat aatgcagttt cacctgaagc
    12241 aacaggactc cccgttgttt gccgccatcc acaaaccgga agagcaaccg gacaagcttt
    12301 tccgctctct gggttttgag cagacctgga aagagtggtc tgacagccaa aaggcggagg
    12361 acaggcagga aaaaactctg caacaggcac aatcccacag ccccggccga tgagccggta
    12421 aggacgacca tgaacatgaa aaaaacgctg ctggtcatac tgaccggcat caccctggca
    12481 tcaccggtgg caggtgccgc cacctgccgg gcgggggccg ctgccgaagc cggcagcaga
    12541 gccgcctggg agcgggcgcg cacagccagc caggcatggt cacagcggga gaatgacgtc
    12601 gcctcctccc tgcagtcctg cctgtcccgc atcaaggaca tcagtatcac tcttccgcag
    12661 ttccccagcc tagacaagct cctccgcgac ctggaaaacc aggtctgtga tgccgtcgtg
    12721 gatcgggtga atgaccatct tccggggaat atcgacccct ggaaagacta caacctctga
    12781 acaggagcac catgagcgaa gcacaaccca cctcccctgt ctcaccggaa gcggataaca
    12841 gcggagatat ttataacccc gtgctcagaa ccatcgcaca gtcagaacaa cgggccgcgc
    12901 tggtacccgg tctggtcagg gcgttgctgt gcagcggcgc agcactctgc atcagcctgg
    12961 tggctaatgg catacagtac tggcatgcca ccggcgtgac gcgcgaatac tttgccactg
    13021 acaatggccg actggtccgt ctggcaccaa ccagccagcc ggcctggagt cagagcgacg
    13081 tcatgaactt tggcagtatg acgctgagcg aagccttcaa tctcgatttt gtccactacc
    13141 gaaaacaaat cacgacacag gccccccgct tttccgaagc cggctttgcc ggctatgtga
    13201 atgctcttca ggcctcgaac attctcgaca ctattaaaaa ggagaaattt aacctcacaa
    13261 ccactatcgg ggcaggtacc ctggtcaacc agggacagat ggagaacggc gtctggttct
    13321 ggaaattcca gtatccggtc aggatgcgcc tggtcggtca gaccagcacc cgccccgaac
    13381 aggccttcac ctttgaaatc actgtccggc gcgttgaccc ccgcatcaaa cccggcggca
    13441 tggaaatcag tcagatggtt tcccgtaacg ccgcagcagg aatctgagac tcacatcatg
    13501 cacatacatc atcttattgg cgcactgctt attgtgtgcg gcactgtcac agctgcagat
    13561 aacccgggct ggaaaaatgc acgaagccca cagaccggcg gaaagaccgc acaggcaacc
    13621 gggaacaccc cgccagccgc acaactcccg ggaaacctgc cgcctcccgg cgctgctctt
    13681 gtacaggaag gcgcatcgct ggattctccc ctgaatgccg gtgaaattcg tgaactccgt
    13741 gggataatgg ccgataacga acgggccatc agtgccccgc tcaccagtgt ggtgccccgt
    13801 atcagttccc tcacggtgaa tctgtctccg ggggccagcc tgccccttgt ccgtaccgct
    13861 ctgcataacg tcagcgtggt gaccttcacg gacgtcaacg gcagtccgtg gccacagtcg
    13921 gatccgccct ataacgctgc acccggtcac tttgacgtgc agttcaacgg caatatggtg
    13981 tccgtcaccc ccctgcgcgc ctgggctgcc gggaatgtga cggtctatct caaaggattg
    14041 tctgtaccgg tcatcctgaa tatcaccagt ggtgaaacgg acaccactac cctgagtcag
    14101 gaaatcgaca gtcgtctgga tctgcgcatt ccccggcagg gacctgccag cccggtggtg
    14161 tccataccgt cagaaaaaat tgccctgcat gacgccactc tgcaggcctt tctggacggt
    14221 gtgccaccgg atgatcccgc catccgccgc ctgaaattct ccggtaacgt cccggacacc
    14281 accatctggc aacacggcga tgatcttctc gtgcgctcac gggccatgct gcgggatgaa
    14341 tttgaacaga cgctggcatc ggctgatggt acgcggctgt ggaaactgcc ggtgaccccc
    14401 ttactcacct tctccgtgaa tggtcagtcc gttcacgtca ccccggaact ggagtaaatc
    14461 atgagcgaag aacaggacac agccgcaaaa tccggcaaaa agctgtcagc cctgctggtt
    14521 atggggggcg tgattattat cgggggcgga tacctgctgc tcacctggct gtcccccgaa
    14581 aacgctgcat cgctctcgtc agtcaatatc aacagcacaa cgtccggcgg cggacggaac
    14641 gtgatggaga cacagcacta ccgggattta ctgcgggctg acaatgaacg tggtgctgca
    14701 gaagcgttac gtaataacga gacgtttatc gccagtctgc cccggggact ggataccgat
    14761 accggaaacg atcagaaaag ggataatccc cccgatgatc agtcaggcac ttccgggcaa
    14821 aacgcatccc ctcctcagga agatcagacg gcccgggaaa aacggcgtga ggcattacag
    14881 aaactgcttg cccgtatcaa cacacagcat caggatgccc ggccaccggt agtggcagca
    14941 gccatgtgga gcaccaccgg cactcccggg acagcccctc atgcgtcacc gtccggtacc
    15001 gttacatcac agcatccccg tctgcaggag acgagtctgg caacaccggc tacacgtcag
    15061 gggatccagc tgataccggc actgacccgc gtaccggctt acatcgacac cgcagtggac
    15121 tctgacaatg cggtctcccg cgtggtggcc tccgtacctg ccgggccatg ggccggagcc
    15181 gttctctaca gccaggacgc cagactcgca ggtcagggaa tggatatcca ctttgaccgg
    15241 atgatgtggc ggggcatgtt tctgaaggtc aatgcatatg ccctgaatga acgaacagga
    15301 atgtcaaccg tggccagcga cgtgaaccac cgctggttta agcacatcgt tctgccgtcc
    15361 gtacttggcg gggtgggcaa tgtcggaagt ctttacaaag acgccaacac acagatcctt
    15421 cagggaaact acggcagtat taccggcagg gtgggaatgc ctgatggaga ggcgctggcc
    15481 ggcgtcattg caggtggcat ggccgaacgg ggcagccagc tgctgacccg ccaggcagag
    15541 agcgaacctt accgtcaggt gacagtatca cggggcgagg tcgtctccat tctgtttgtt
    15601 gagccggtca tgagcaacga tatcagtacg ccgtcctccg gcactgcccc ttctgagtcc
    15661 ccctcctccg gacgtccgct cacccaggcg gaggcagagc accaggcctc tgacaggatc
    15721 cgggcggcgg tcctccgtaa acagaatgaa atgcagcaac gctacggcat acaacaggaa
    15781 agttatccat gaaaaacgaa catgaagatc ccggcagctt tggcgaaacg acggcaccgg
    15841 catccggcaa atccttcctg aaacgccagt atatgggata cagcctgccg gtctgggccg
    15901 gctgtgccct catcatcctg gtcgccatct ggtacaagtt tctgcggaca ccctcagagc
    15961 cccctgcaga tgcaggcttt gctgtcacac cgcccgctgc tgagagctgg gcagagccca
    16021 tgaccatgac ggagtccggg agcggaaaca acatgcccgc accgccggtt accccacagg
    16081 cagacatgca gcaacttgcc cgtgatctga aagcagagct ggacagacgg gatgaggaaa
    16141 tccggcgcac cctgaccatg ctgaaggaca gtatcaccac cctcagtaac gccattcaga
    16201 aggatgaggc ctgggcacag gaaacccgtc agttgcttga ggagacccgt aagcaggtgc
    16261 ataccctaca gatgcaggga gcactgccag ccccgaccgg gaataacaga cagcctgcga
    16321 aaaccctgcc ttcacctctg cagggcatga aaatcatgtc ggtggagaaa ggcatggcct
    16381 ggatccgctg gcagggcagt gcctgggcag tacgggaagg cgacagtctg ggaaacatca
    16441 ccatcacccg gattgacccg tccagccggg cagtcatcac ctctgccggt acattacgat
    16501 gatgagcatt gatgccctga cagccataga gaactttgcc agcggtattt tcagtgcagg
    16561 catggagttt ctctttacct ggggagagct gctggggatt atcggcctta tcggtcatct
    16621 gatgcgcgcc cgggcagaag gacgtcgcag tatgggaccg ggaaaattta ttgccggtat
    16681 cttcatctgc ggcatgctgg tcagtctgcc ctcaatgatc aatgccggtg gtacccagat
    16741 gggcttcagg gcagattctt tcgcccccat cgcatacgtg cagccgggct cctttggtgc
    16801 cgctgccggt gccgtcaatg ccattctctc actggcaaaa ctggccggcg tcggttttgt
    16861 catgaacggc atatccatct ggcgcaaatc actgctggac gggcacaccg ccctgagcgc
    16921 cagtgaatcc atcagtaaag ggaacgtcaa gtttgtggcc ggcgttctgc tggttttcaa
    16981 cgaccgggtt atcgatgcca ctctggcaag cctcggtatc gccttctgac ccctgtattt
    17041 tttcagtaaa tcaatctgtt aataaaggag acactatgtc acgacttcgt gccatggcgg
    17101 cgcgtctgcg cgctgcatct gtttatgttc agttatgcct gatggcctgc cgtgaccggc
    17161 tggtacgcct gttactgctg cttcccgtga tgctgctgcc ccacaccgca atggcaaata
    17221 ccctcttcga tatgattaaa accgttggcg atggtgccag aggctccagc agttcgtttg
    17281 tggctatcgg tcaggttatt ggcctggtgc tctttatcgg cggcctgctt ggcctcaaac
    17341 aaatcggtaa aaaacccggt gcagggctgg cctgcctgct gtcaattctg gtcggcgtct
    17401 gccttgccgt cgtaccggaa ctgatgggca gcggacagaa aacgctcggt ctttctccgg
    17461 tttcaatcag ttaatccgca aaggcaccgg gaaaccggtg ccgtcttcac acaatgagga
    17521 ggaccagacc atgtcctgtg agctaccccc tttcaccctg ctcagaacag agcacggcaa
    17581 cgtgattgcc cgcgacaacc gggataatca ggagtttgtg tttgcagagt gttactccac
    17641 cgctatagca gcactgattc tggctgccgt caccctgtat acagagagaa aagcgtatga
    17701 aaaagacccc gccactcatc gccccggtcc gggaacgatg gcttttcccg ctcccgcaac
    17761 cggacacggt attcagcggt gaagccctgt taccaccgcc agtgctctca acagagggac
    17821 gctgcccctg ctgtcgcagg accgtcaccc accgcttcat tctggaagat tcatggccat
    17881 tacagcagat ggctgacacc tgccgggata cggtcgtcct gctggaaaaa aacctcaccc
    17941 gggtgatgcg cctgaaaaaa cgtccggtac cggaaaacgc tgacgaaaaa aagaaacaca
    18001 cccgaaccct gcaggatgcg gagcggtccc tggcacaggc ccgcctgtcg gccaggcgac
    18061 tggccctgcg tcatgtggaa aagtcgcaaa tcgtcacaac ggatgcactc agcgaaaatg
    18121 aaagtgacct gctgcagccg gaaggcccgc cctttcatct ctgtgccttc tgccatgcct
    18181 ggcactgtct gaacggctat gctgccgcac agggagtgat ggtctggctc cccgatttgc
    18241 atccggcctc ggtggttgcc ctcaatgcgc gggcactgca ggagattttc agcgataacc
    18301 gtcagcgggt caggcaggga cgggcagtcc tgaatgccct ggtacagaac cgtctggccg
    18361 ttgaggagaa attccgcacc tggcgtccgg cggattttgc tgatgccctg cgccgctggc
    18421 cgccggcaca gcgtaaaacg ttgagggaga aaatggacgg ggtggcgctc attctgctgc
    18481 cggattcgtt tcctgacaaa aagtacgtca tgtgacacac accggtgccg gtgacgttct
    18541 gccggcccca actgacagag gaacaaaaaa tggataccct cactgccgga tatcagtttt
    18601 ccgcagatgc attccggcgc tttattatcc ggacgctgac tgacgatatt ccgcctgacg
    18661 gagatgaaaa agagattgcc cggttcattc tccgccaccc ggcatttaac ggcggctggc
    18721 tgctctttct ggctgcagaa attcatgaaa gatcccgtac ccataacagc atcaccgtca
    18781 cagtgagcgt cgataactat ctctcatgga tggatattgc cgtgtccggt ctcccggaat
    18841 taccggatat gcccttctgt gattttttca ttcgccgcca gcagtttatt tatccgggtg
    18901 tacccccgac aaaatcagga gaagaatgat gaaaattcac cgcatatccc cggagacgct
    18961 tataacactc atccacgcac acctggccgg aaaagctgac agtaccgcca aagaagagca
    19021 ccggctactc cgtcgtttcc tgcgggatga tgacggcagg ctggccggcg tactgctgaa
    19081 tattgccgga atacttcagt tcaacaggga attaagtgcg cggcataatt atccggccac
    19141 acccctgact gaattttcat taaggaaacg gggaaaacaa cttcatctct gtctctgcag
    19201 tctccgtttc ttttatattc ctccggtatt tatacaaaac aaaagaagaa aatctattgt
    19261 tgtacacctt aataagatca cttataaaca aacccattca atacgctgac gaagtgattc
    19321 atactgatta tactcatctt tgcctatatg ttttttaagc gtattaacaa tatcatattg
    19381 aggatgtcct gaattgtcag tatacagtgt tgttgcagga aggactgcat aatctgatat
    19441 ttcacaacct gtatacagtt ctttgtcagt tcggcaggaa tggcaaagag aaagacatgt
    19501 atacaggtct gtgttttctg cctcctcagg agataaccac gacacatatt gcaaatcatc
    19561 tgtatcagga taacaatttt cttcctgaac ctgaactctg aaaatataga aaaataattc
    19621 atcttttgaa aagcatgcta ttttattccc ccaatgcacc gcattatcaa gttgatccga
    19681 taaataaatc catcctggtg tcgtctctaa cgaccagcat ataacagaag gagcatcagt
    19741 tcttattttc ccatctttta ttatttgcag gcctctgctc attgttgtcg catgaaaaag
    19801 atttaatatt ttattttcag ccttcactct atttcctcat ttcccaagaa acatattaaa
    19861 aacggaaaac attacacata acctggagga caaatcatga ctttaaattt ccctgccggg
    19921 gaaactacac tattctcagc aaaaaacatc ctgacagcaa tactcactca gcacaactta
    19981 cacgcatagc gttcccattt gaatacagtt gcagcccgcg atttattttg tcttccggag
    20041 ccacctctgc catgaatatc aaccgcatta tttttgccat tgaagactgt atcagtaccc
    20101 tgtcacggta ttccgtttcc gcattcttcc ccgattactg tgatctgcac accgtcatcg
    20161 gtctggacca gcaggaccgc gaacgccgcc cctggctgaa agccccctac attgccacca
    20221 caaaacaggg gtattacctt tccgtctttg aaatcagcgg tgccctgaaa gaaatggatg
    20281 aaaacccgga ccagacggcc cccgggacac tggagtcact gattgcagca ctggctgagc
    20341 gaatgaacac ggcctggaaa aattccggcc acaaaatcag ttttgttttc gaacgcgatc
    20401 cggagcgtgg aagggatgaa atcgaagcca tgctcttacc ccagcgaaaa tccatcgcac
    20461 gcacggggat cctgcttcag gacgtcctgg atgaaaaagt caccacactc accccctggc
    20521 ttgtccggga gcgctgctgg ctgaccgtct ggagctctga agaactgctg agccggaccg
    20581 atcgcaagga ccatcagacc cgtgtcagga aactagctga acacgctccg ccagcccgtt
    20641 ttgcgcagga tccctggcgc tggacacttt ccgccctcaa aatacggcat gacgccttac
    20701 tggacacgct ggagcaggcc ctgacacatg attctgatgg cctgctgatt cgcctgatgg
    20761 atatccatga agtgggacgg gaaatccgcc gccagctgga gcgcaacagt acaccggcag
    20821 tatggcagcc tcatctgcct gaagatgccc gtcctgccgg ctggcgacag ggcggggata
    20881 cctctgtatt ccacgcaccg tcgctgaatc tgcagttatt caccacacag cctgaaacac
    20941 acggcagcct gattcaggcc ggtgagctct ggcacggtat ggtcgccatt accctgcccc
    21001 ctcagaatct gcggacattc aaccagctgg tcagggatgt gccccgtgca atcccctggc
    21061 gtatccggat ggatctgatg cccgacggca tgaaggcgct gggggtcaag aaaaccctgc
    21121 tgacctacag cagctttatt cctcctctcc ggcccatgta tgactcggta atgatgctga
    21181 atgacatcaa caagcatgat ccggtctgta tcatgaccat tgttgccacc acatggggaa
    21241 acagccggga agtctgtacc cgtaaccagg ctctcctgaa atctgcgctg gaaggctggg
    21301 gggtatgcgg caccaccaca accttcggtg acccgagacg tgcctgggtg aacacggttc
    21361 tggcagcctc ccacagctcc ggcccgatcc ccctttaccc gcccctttca cacgcccttt
    21421 ccctgtttcc cctgaacagg gcaggctctg tctggcgggg acagggaaat ctgatgatgc
    21481 acaccgaaga cggctctgca tgggaggtgg cgctggcgtc atcacaacag aacaagcaca
    21541 cggagctgac acccggcgca cccggtctgg gcaaatcggt actcatcaac gcactgtcgg
    21601 agatccagat agcctcagcc cagaagaatc tccctttcat tgcctatatc gacaagggat
    21661 tcagtgcaca gggactggta cagcttatcc gtgacagcct gcctgagcag agaaaggacg
    21721 aagccgtggg gatcattctg agtaatgacc cggaccacac ccgcaacctg tttgatgtga
    21781 tgtacggggc cagaaaaccc gtcacaccgg aaaagaactt catggtctcc gtcctctgtg
    21841 cattgtgtgt ggataccggc accggtcagc cctgtaatcc cggcgacacc cggcaaatca
    21901 tcagcagcct ggtggacctg gccttccggg aatatggcga gaataacccc agactttacc
    21961 gcgcaggtac ggaacccctg gtggatctcg ccctggaaga gagcggcatc gctgaacaac
    22021 atgatgccgg atggtggaat gccgccacct ggtttgaaat cagggacatg ctgcatattg
    22081 cagggaatat ccccgccgcc cagcgggcac actaccaggc catgcccctg ctggctgaaa
    22141 tgtccgccct gctgggacag ccgtccatcc gggatgtgtt cggcaccgtt cagcgtgata
    22201 actcggaaga gcggttgctg gactacatcc gccgtgccct cgatcaggga cacagtgact
    22261 acccgatgat gtccggctgt acccggttta tgctcagccc cgacacccgc gtggtcgccg
    22321 ttgatctgaa caatgtggcc ggggacaaga cacctgccgg acgtctgcgc accggtatca
    22381 tgtatctgct ggccgggcag atcgccggcg gggattttgt cctgccgcag tatcaggagg
    22441 aaatacggaa aaatctcgac ccacgctacc atgaggtgat tttccgccgc attgaacagc
    22501 ttgatcagga ggtcaagacc aaagtctatg acgaactgca caatgcaaaa gggatcaact
    22561 tcatctggga agccctggac acccaggagc tggagcagcg taagttcggg atacgcacgg
    22621 tgctgagcac ccagctgctg cagcattatc ctccggccgt gctcaaatcc gccaacaccc
    22681 tgtggctgct gcgttaccgc cctgacgaaa ttccgttcct gcgggataac tttggcgtcc
    22741 cggaagtcac actgcggcgc ttcctgaaaa tgccggaagg ggccgcaccg gacggcagcg
    22801 gtgtcccggt actggctgtg ttccgtgtaa aaaacggcac gctggcccgg atcctgaaat
    22861 tcaccctcgg tccactggag ctgtgggcac tgaactcctc tcctaaagac agcgccctgc
    22921 gacgtgcgct gacgcaggag gtggggtcac tgcgggcacg ccagatcctg gccgaacact
    22981 ttccccgggg ttcagccacc tcactgatag aacaccgcgc ccgcacacat gacagtgaaa
    23041 acgtcatcca tgagctggca gcagaactca tccgtaagca gggatataac ctctgatgta
    23101 cagcattcat atcacccccc gctgccggcg tcctgcccgg ggacaggtct tcctgaaaac
    23161 actgcgcgtg gacggtgaca gtttcagctt caccctgccg tccgcctgct tcacactgcg
    23221 accgtccccc aatccccggg tcatttttgc cagtgacaga cgggctgacg gggagatgag
    23281 tggtattcgc ctggccctgc ccggagagac aggcacgctg ataacaacgg ccacctggca
    23341 ggttaacgtg ccggagcgac cgccttttga tatacagcat gtcattcact ggcttctgcc
    23401 cgcaccactc actgcgctga tgtctgacaa cacctggctg tggccggatg tccccggcac
    23461 accggcactc acagccggag actggccggt catggaaagc gacaccccga cactgaaacg
    23521 cgtgaagcgt cgtaccttca cgctcatcga taaccgtaac cgtcagggat ggatcacgcg
    23581 ccgcttccag tgtttcccgc tggctccgct gccggaatca ctcagtcatc gcgtaccaga
    23641 catcctgtat cccccgaaaa cggagaaaaa agaatgcaaa gacaatctgc aaccacactg
    23701 cttgcactcc ttgtaggctg tgcggttatc cctgccaccc atgcctactc tgtgaatgtt
    23761 gtgtccagtc agccggtcac ccgacagatc atgccggagc tggccaccat acagggcatc
    23821 atggaggaaa tggtccgtat gcagacggcc accggcacag ccatcaccca gaactcagaa
    23881 aaactggcca ccgtcattgc ccaggacggg caggccaccc gtcagcagat gatattcagt
    23941 aatgaaacac accgcctcga ggaggccagg aaaagcttca gcgtgccgga ctccatctgc
    24001 agtgaatccg cgtccggcat tgcagcagaa agccgccggg cagcagcgtc tgcagcggca
    24061 cgtctgagtc aggggggagg ggtcagcagt aaacccatcc gggaacgtct ctcccgggct
    24121 gcggactccc cggtccgcga ggcgtatgat agtgccggca tccacgccgg ttactgcacg
    24181 gaagcggagt atgcccgctt tggcggaact gatgtctgcc ctgccgtggg cgatctgccg
    24241 ggcggagaca gccaggtacg atcgctctat cagggcgcag gcacagcaga taccccggcc
    24301 gctctcacct gggatcagaa acagattgat gccgcgacgg cttatatgaa aaacaccgcc
    24361 agaccgtcag cgggtcgtgc cccggggaaa ggagaagtgg gcacacagac cgggcgcacg
    24421 tatgtgggtc tgcagaatga atacaacggc atcatcgatg ccgcctctca tccgcagctg
    24481 tcactgattg ctgacagtac ccctaatgaa gccacccgtg gggcactaac tgaagccctg
    24541 cagtcaccgt cagctgcggc atattttgac cggaccgcat catcagaagc ccgcacccgt
    24601 ggccacatga gccagcggga gtttgaggcc tttgaagccg gcagacggta tgccaacacc
    24661 gactggcagc aggatctgca gggcatggaa ggcgataacc ttctccgtga gctgctgcgc
    24721 accaccgccc tgctgaactg gcagatgaac gatctgaaag agcagattcg tcagggtaac
    24781 gttatcgccg ggcagcaact tgcgctggcc gcacggcagt attacggaca gcgccttggc
    24841 gaactgtcac aggccatggg ccaggggagc gtaagatgaa agacgacaac agcatcgacg
    24901 aaaaaaaacc ggccccccgt ctccgccgca tcggtgatat agggataaat ctgttcgcac
    24961 cactggccga aacccgctgg atgctgcgca gctgccgcca tatgctggac cagcataaaa
    25021 cgcgcctgaa gcgcctcatg cccgaccggc aaccggagag tccggtctgt atgacctggg
    25081 aggaagcggt cagggccagc ggactgacgg tcgacgaact ggaccggcgt ctgcgacgtc
    25141 gcaggatgtt ctggcggaca ggattctggc tgatgatgat accggtactt ctgctgtgtg
    25201 gtatggccct tgcggccacc gcactgccgg tcatcaccct gatacgtatc ctggtctgcc
    25261 tgttactgat gagtaccatt gcagcactgt gtgcctcaaa agccctgatt gcgtcatacc
    25321 gcctctggca gctgaatgaa cgtcgggtca gcgaggacga acagggcaca ttccccgatt
    25381 acctgcaggc ccggcacggc tggaaacagg ccacatggct ggccattacc caccggcagt
    25441 actgactgtc cggtctgcaa tttcttttcc tcattccggg ggctgatgcc cgggcatccc
    25501 cttcggttcc ggagttaccg tgaaaatcat acccagagca ctgagtgcag gtctggcgct
    25561 ggctgccgta cctgcacagg ctttcgtcac ctatcaggac attgtgagtg ccgccaccaa
    25621 tccggatgac ctgtcgcgcc aggcactggt caccattttt ggtgatgtgg tcacaaatcc
    25681 cctgacagcc agcagcaaca ccatcattgg caacctgttc atggtgttta acgcaattat
    25741 cgccacgatg gggatagtct ggtttctgtt tattggtatc cgtcatgctg tccgcacggg
    25801 acaccagggc agtgtcttta acaacggacg ggacgtcgtc ggcatactca gtgtcgtgag
    25861 tggatttttg atgattgtgc ccaccgcttc cggctggagt ctggcgcaac tggtcatgct
    25921 gtggggcgca tccatcatgg gcatcggttc cgccaatatc atggttcaga cagcggcaga
    25981 aaacattgct gaaggctatt caatgaccgt acagccagta catgtctcca cccgcacggc
    26041 agcacgggga attctggaga tggaactgtg caaacacgcc atgaatacgg gcctcgatga
    26101 ctttaaccgt accgcacgtt catcaacgcc gcccatgagc gaatcctcac ggacagagaa
    26161 tggcagatat accgtcaccg tctcaaatgg cagcgccacc tgcgggagtg tgagtctctc
    26221 cgtgaaagga aacggcagta acaagcagtc cgcgctggcc cattttttca atcccttcat
    26281 tgaaacggaa tatcaggggg ttctgacggc acaacgctcc gccatggata ccatgctccg
    26341 tgacctggac agcgcggcgc aggaatttgt gtcggcatac cggacccggc gcgacacggg
    26401 taacggcaac ctgccggata ttgaaagccg tattcagaag gcagccaacc ggtatgaaga
    26461 aacggtgcag aaggcgttgc cggcagataa cgcagaaact gagcgcaggg agcagctgaa
    26521 atcctacctg accacctacg gctgggttgc cctgggtgcc tggtaccaga cctttgccac
    26581 cgccaaccag cgactggaag acctggccaa ccgcgctcct actgtgagtg gcgtctcgtc
    26641 actgggcgaa gccggggata cggaattcct gaaggaagtc aagggggctt accaggcaca
    26701 gctacagaac tcagcgtata ctcctgcact gggaacagcc acctctgcca gtgaatacca
    26761 cgcatctaaa actcaagacc ctcaatcagc aatcttaaaa ttgattgggt ttaacctaac
    26821 aagaatgact aactggacag ccacttatct gagcggtaca ggtaccacaa ctaatcaact
    26881 aaatccgttg ataaaaatga aaaacattgg cgattacacc atggttacga ccgaaaccat
    26941 ctgggcgggt tataccaccg tcagggtact ttccacggcc ggcagcaact ccgtttttgg
    27001 tcgactggtc aatgccgtca gcggattatc tgacgccgca aaggcttttc tggaagcatc
    27061 cgcaccacca ctctacttcc tgctgttttt gctgttttgt gccggttttt cgttatccat
    27121 ttacctgccg tttatcccgt ttatcttctg gatgaccggc atcggcaact ggatagtcag
    27181 cgtactgatt ggatgtgctg ctggccccct gtgggccgcc acccatctgg gaacaagtca
    27241 ggaccgggga agccgggccg cttacggtta catctacctg atagacagca tgatcagacc
    27301 gctgctgatg gtgttcgggt tcttttttgc atcagtcgcc atcgtggccg gcggcacaat
    27361 cctgaatgcg ctgtatgctg ctgcactgat gaatgtccag ataaactctg tgacgggcgt
    27421 gttcagcatg gcgggatttt tgatgattta tgcccgcgcc tgtaccacac tggttgcagc
    27481 cgtttttgcg cttcaggctt atctgcctga ccatgtaatt aattttctgg gcggacgtga
    27541 cggtgttaat atgctgggga atatggtttc ttcagtcaaa gatattattg ccggaggtaa
    27601 taccaatatg cgcagaacac ctggcgttcg tgaagaaaaa ctgaaaaata ttaatagaga
    27661 tgataaagac ggaataaaac aataaatgaa aatatcgaaa aaccactaaa acaccattgc
    27721 catattcacc tgaagagatt aaaatacatt caggtgaata tggaggttta ttatgaacac
    27781 aacaaaaagc agatatcctt cctggtgggc atattattac cttatccgca ctgcttattt
    27841 tatatttggt gttccttttt tattactatg ttctctagga tttaccggta tgatgcttac
    27901 agaaccatat atagaaacag atattcaagc atatctatat acttatggca gttggctcct
    27961 attaatactc ccatcactct ggctatatat gaaaaccaga gcgaagaaaa agaaagtcca
    28021 gcaggttgtt cagcagataa aagaaagcag tccctttgcg ccgaccagcg attatgagca
    28081 actgtcattc tcgaagagtt gttatttcgg gatcgacatt aaaaacggca ccatgctgta
    28141 tgtgcgtatt tatccaaaca atgtgatgga tgtaattggt ctggatattc acaactttac
    28201 ccgcacggtt gctgaggacg gcaagctgga aatccacacc acctatgtga gtctgccgat
    28261 gattcctctt gagatctccg gcatctcatc aaggacgctg gccaacacca tgcacaccat
    28321 ggctgcacgt ggatatgagt acaaggaacg tttcccacag atgatccggt atcgggttaa
    28381 agagtgggaa aaagttgccg gtgttcctgt tgcagaagta ttttgaggta gctatcaact
    28441 gttagacgat aatccgtcag ccggttttct ctgaaccggc tttttctttt caggcagaat
    28501 gcctgtctgc cgtctatctc aggacgccgc atggagtctc tatgttttcc ccacaaattc
    28561 ttagcactgt cttgcccact gtagacaaaa tcaatacaat tctgcatatc agttatctat
    28621 aaaagataac aatatcatta taaataatta tcatatccac acactcaagg cagtacctag
    28681 aaaacataaa gataaaatca tgtctgaatc ccgcagcaat tttccagcac gacatggtac
    28741 tccatggaat actgaagagt tacagcgtct tctcgtatcc atagcggagg gcgtctcgct
    28801 aaaaaaactt actcaaacac atcaacgatc gtccggggga atacgtggag caatcaaacg
    28861 cctgcttcct tctgagtttc ttgagttcaa cgatataaac acggtgaatg atctcagcaa
    28921 ttacttcaac aagattcctc gccaagaaca caatagtatc atcaataatt taatatcatt
    28981 gagcactgca aaaacaatta ctcatgataa agttgaaata caaaagaata gttttaaaca
    29041 aaatacccca ctccccctct gccaacccaa tacagatttt aaagattata tagccgatga
    29101 acatgatgtc attatgctaa ttcattctgc tatcgaaagt ttatctaata aacgacatca
    29161 atatattctt ctaatgcgac tcggcacaga tgattcacct cattctctgg cagatattgc
    29221 cgtcaaatta ggaatttccc gtgaaagggt aagacaactt caggaacgag cccttggctt
    29281 actagctgct aaatctcgct atgaagggac acctggagct tgccttaaag cccttattaa
    29341 ctcaataggt aattcaccat atgatatagc agtatggatt tatcgtattg ttcatcggga
    29401 tttcgttaca tcctctgagt tagccgccaa attcatcatt tttgccgcag gcattcctaa
    29461 agcaagacga gatgaaataa aaaattcgct ctcattaata tcacaattac aaaagcagaa
    29521 gttacgtgaa cgaagagcag aattagcaca cgctcacgct caggaaagag cccgaatcaa
    29581 gaaagaaaga gttgagttca tattcagtaa atggctagac aatacacatt ggccaaaata
    29641 tatcgcacct cctccccccg tagaacagct atgttcacag agagcggtta atgatactga
    29701 catatctgga ttcttttact ctcaaaaatt aggtcgtaca gtccagtacg aatcagggct
    29761 tgagtttaaa ataatgaatc tattagaatg ttgcgatcag gttcttttct atcaagaaca
    29821 accattttct attccatatt gttttaaaaa caaatcaaaa aaatactatc cagatttact
    29881 cattgcgaca gttgatggtc ggtgcctact tatggaagtg aagccaacag accgaatgac
    29941 cttgagtctc acgagaataa aaagtaatgc aggtcgcaaa tgggcacata ctcgaggatg
    30001 gggatggttg gtcattagtg ataggttctc gttacgtcag ctggaagaac atgccatctc
    30061 aacaaacaca tggaaactta tagaggctga actgaaaaca tcaaggattt tagcatggcg
    30121 tgaaatgatg gagttacgta cacgatacga gattcatcgt ttagatctta ttgcatatat
    30181 cattcagtct ggtgctgaag tggataactt ttatcgaatt accccgaaaa tatctaataa
    30241 tacatctaac cagagacaac caaatgagag cgactgtcat aattgatgac gcacaggacg
    30301 gaaaaaataa tagctgccgg acagcagcaa ccagcagtcg tccggtaaaa aagacaaaca
    30361 aggcgcattg aggtcagcct tcgcaacaat ccggcggcag atgtcctgcc gccgtgttgc
    30421 ccgttaacgt ttaacttcgt aggctaacgt tgccacaaac accgtatttc cctgctcgat
    30481 acgaaatccg caaagcgaat ccctcaccat ccagacaaaa cacagtatcg tcacacagac
    30541 gacgattaac atcattaaaa acgttcgttg tggcatcgaa gcccctccat tgcctttcgg
    30601 ccgtcatcgg gctactataa tgttgtctag gcattacagt gggccctggg ttgattgata
    30661 aaaaaatcgc ctggggcttt ctgctacatg ccgtccacaa aacgctttcg gcatacagcc
    30721 tcaagcgccc gccgctattc taatcgtttt cctgtccgcc acaatccttt tcatgccacc
    30781 acgtattttg tgtcagggac agaaataaag ccggaaagtg actacgtgtg cacacatctg
    30841 ttttccgggc tgcaggcatc gtgttatttt ctgaaatgca aaataataaa aaacaaggac
    30901 acatcatgaa ggatgaaata cacagtacca gcattaaccc ggatgttgtt gagcagtttc
    30961 tggcccttat gaatacacat tgtaaatcct cagaagaggc gctcaccatg ctgagtacgc
    31021 tttgttacaa cctgatgatg acatgcggta tccattccat ggacagccag atgctcaatg
    31081 ggcatgggat atccatgcaa cttcagggga ttgatattgc cgaaaagcca ggcaagaata
    31141 ttcactaacc tgaacagggc ctgaaaacgc tgtcttttca ggcctctgca ggcaaaaact
    31201 gatgacaaca aaatttctgc gtttgtaccc caccgatgaa aaagacaaaa actcacaccg
    31261 ggcttctcat cattaaagat aaaacccgac gtgtcagcct ctacgaaacg ccaacggcat
    31321 ggtgtatcag ggggcaggag tgctacagca aaagcactgg acgccgctgt ggcagccacg
    31381 acagtctgag cagactgcgc ctggacagca ttaagcctgt tgaatgagtg gtggcaccat
    31441 gaaagataac aacacaaccg ccaccccaga aacctggaaa atgcgttttc tggccaacgg
    31501 gacatccggc acatggtttt acactgacga cattgcagtc actgacgcgt ggcttcgcgc
    31561 gcacccggat gatgtggagg ttatccctct ctgccggata cagccccgcc agcattccca
    31621 tgaacaacat attgaagaac tccgcgcagc cctggcccgg atgctccata tgcatcatat
    31681 gatgctggaa accacacatt accgggaaaa tatcaccgat gcccgttgta tccgtgaaat
    31741 gcatgaagcg ccattacagg cgctcaatat tctgtccaga tacccgcata aaaaggacga
    31801 ggtgtgacgc atgtggctac tgattttctg gctttcatcg ccctttaatg tctcttccgg
    31861 tgatgcccgt cagcccacac tggcggtgca cagccaggcc tttcataccg aacgggcctg
    31921 ccgcgatgca ttgcgcgcca ttaaaaagga gaatgttggc gaattttctc tgcggggcgt
    31981 ttgtgtttct gacggaaata cgaaggagga ggctgagagc tcatgacgga tattactgac
    32041 agacatacac ttcgccgtat gtcctggtcg gaactcatca cggcaggaca ggaagcagaa
    32101 tttcagcatg attacgagcg tgccagaata gtgtggtcat tcgccttaca tgttgcaaca
    32161 accacgatta acaaaaatct ggccatagct catattcgac gctgcgatac tttgttgcat
    32221 aaatcaaagg ctgtacccgg aaacaacccg tgtggttccg gtcagcgagt ctgagacctc
    32281 aacatcccgg gtgatgattg tcattccgga ctgacgcagc cgctgcacat ctgcggcaat
    32341 acgttgaata ccaagccaga acagaccatc cagcgcggtg acaattaacc cgctttccag
    32401 cgccagtttc agccgtgctg tcggggcttt aacctgcccg gctatatcag tgaaacaacg
    32461 cgtcgtcatg ccatagctgt ccgcccgccg tattcgcgtc gcaagactgt aactgaagct
    32521 atccggcacg ccggataagt cattctgcag actgtataca catccccgct gccgctcatt
    32581 gaatacgact tttttctggc tgagctgcca ttcccgccgc acgctgtcaa tcatctgcgg
    32641 tgtccgggtt aacagcagac gaaacggcag ttcaaaactg gtcacataat caacattaag
    32701 taaggcaatc cgcagccgct ccctggctcc tgctccggta tcatggcatt cacgcatgac
    32761 atcttcccac tggcgcatca gtcgcggtga ctcattcctg gccctgaact gatatttctc
    32821 aatctgataa tcaatatgtt cctgcatacc gtcaccggat atctgttgcc gtatcatcac
    32881 ggatatcagc gtactggaat tcatgccctg cgtgaagtat cacactgcca aaaaaaacac
    32941 ctgaacgtta ttatttcgca atattaattg cacctgtttt cataaataaa aaggagacga
    33001 tgaaatgata aaatatatct tttcactcac cattattttt tccgcttctc tctgtgccgc
    33061 acagattcag gggcacgtca tccgcgttct tgatggtgat acgctggaaa tattacagga
    33121 caaaaagcct gtcagggtcc gtctggctaa tattgatgca ccggaaaaga aacagccctt
    33181 tggacgctgg tcagccactc agctgaagga cctggtggcc ggaaagcccg taaccgtgca
    33241 atacgcgcag acagacaggt atggccgtat tctcggccgg gtctataccg ctgacggcac
    33301 agaagcaaat cgctggcagg tccgtaacgg cgctgcctgg gtgtacccgg actacaataa
    33361 tgactatact ctcccgccgc tccagcgtga tgcccgcgcc ctgaagcggg gattatgggc
    33421 agataaaaat ccggtaccac catggacctg gagaaaacag aataagaaat aattatttgc
    33481 tgatatgaag aaaaaaacca tttcaaagaa aataaatggc aaaaatacag catggaaaaa
    33541 attgccattt ttaccgccgc gttattttta atatttgctg tctgctggtc gtaataagca
    33601 gaataacaga aaggtgtaaa aatgaacctg gttgatgcat ttgtcactaa agtgatatcc
    33661 ggaccgtatg aagaatacgg aaaatggtgg gtggatgtag aatatatttc ctggggagtt
    33721 ccgggtaaaa gccggctcat gtttgactca cgggaacagg cacaggaagt gcaggaaggt
    33781 tttcgatttt taacctgagc atattttgtt aaagggcaga aggcggtgcc cctctgccct
    33841 taagtacgtt tccgggatta taagtcaacc agttcccgga tcagttccag gagagctatc
    33901 actgcgttag ccacagcaac aaccgccctg agaacgatga ttaacaggtt aatcatccgc
    33961 ttctccatca atggagaaag aacaccgtgg tttgccctta cattgcctgt cgccacgttt
    34021 tctatagtgt cagttataga cagttcttct ccggccagag caccaaaacc agcaccacct
    34081 gatgttttgg ccaggacttg caacctgttc atcccggtga acgatatgcc ggaaagaacg
    34141 tgcctcaaag ctgacacacc gagtatatac ttatactgtg cttgcagaaa tattatttca
    34201 gccgtattat ttcatagtca gttataggca gttatcttcc ggtcagggct accaacttcg
    34261 atccggaatc gcaaaaaaac cggcctcacc agtcggtttt tttgcgtctg tacctcctcc
    34321 ccggacagca gttctctcac tcccgttgaa tatttcctgt tgaattttac gaaaatacgg
    34381 caaatggatt gatgcgaagg taagtctcca gacaaggcta acttgctgat tatacttgtt
    34441 tcaggcgata tcgctactcc cggaacaata gactgtaacg aacagattgc gatcaggtga
    34501 atataacgat attctggtaa cgttagttga aaagagactt cctccgggcc agagccaccc
    34561 actctccctg ggatcgcaaa aaagccggcc tcaccagtcg gcttttttgt gcctgtctct
    34621 caccaccttc tgctgttcct gtgaaaatgc cctgctgaat tcagccctgc ccggtcatta
    34681 ccggcgattg ttcgcattaa ttccactcag cctcatcccg aaatttatct atttatcgat
    34741 ggaggaatcc tcgtgtctta ccaacactcc cccacaacag aagacccgat gaacatatgg
    34801 tatatcgttg gcaccatatg tctgctcttt gcgcttctca tctggctctt tttacccgac
    34861 atcgtctttg ccacctgcct gatcctgcac acaatgtggg ggatgactga ctgggggcct
    34921 tttcaccatt ttgccgcccc ccgttataac ctgctggcca acaccgccaa caacgctgca
    34981 acgatcactt tcagccagtg gctggatgtc atgtcacaga ccgtggggat cctctggctg
    35041 attctgcttc ccatgacgat cggctttctg tggatgtggt ttcagcatcc ggcccagccc
    35101 cgcttcaccc gcagaccact gaatatccac acgctgccac atctgttttc atcactgtca
    35161 ccggcgatcg cccccgttct ggctgacgga gacagcaaca gactcttcca cggacaaaaa
    35221 cgtcccgagc gccgtgtcgc tctaaccccc gaagcctttg tggagcagaa caaccttatc
    35281 cgcaacatgc agctcgatgt tgcggccacg cgccagtgct ttatggcgca actgggccag
    35341 cctctgacca cctggaaaga catggctcca catgaaaaag cgctctttgc cgtctttggc
    35401 ctgcagttct tccttgggga ccggaaatcg gctgtttccc tgatgaataa cctcaacctc
    35461 tcctgcagac tcaaaagcaa gcgggaccag gggcgtttca gcacgccagt gtattcactg
    35521 gccagaaacg cctttatccg ggtcataaaa acagaagacg cacaacagtg gctcaggcag
    35581 caccgttacg ttcgcagcgg tcttgtctgg ctttacgcac atgatttgcg cctgacgccc
    35641 cccaactggc tgtggctcaa gggcgttgac cggacgctct tctatgccct tcaccgggca
    35701 aacaccacaa aaggcttcat cgaaggggcc ggcgtggtgg ccgttgcccg ggcagaaaat
    35761 gaagccagcc gtctcggcct cccctgcccg gaaccctgtg tggaagaggc cattgaaggg
    35821 cttcgacggg acatgctggg gctgggcctg atatgggacg aacctcagcc agatcgcgat
    35881 cgtaaacgtc agatcaggac ccgctggtca ctcacggatg acgtgatacc ccgccgccat
    35941 gataacgacg aagacactga cactggtgaa accaccgaaa ccaccgaaac caccgaaacc
    36001 accgaaacca ccgaaaccac cgaaaaacag catcccgccg acaaggaaaa agaacaatga
    36061 ccatccacta cactgcaaca ctgaataata aacacctgtc cctgaccgcc ctgtaccctg
    36121 acggtaatcg ggaagtgatt gccatcctgc cagtcacaga actgggcgca ctgattaacc
    36181 gtaataacag gctgatgcac ctgtccttca gttctccttt tcgcgaaata accgaaacgg
    36241 tgcttgttga taccgttgat gcagaacgtc ccggacatca catcggcaga atgctctcag
    36301 cgattgatgc ctgcctggag gccgaatatg ccggaaaagg aaaacatccc tcccggaaaa
    36361 atggcttctg gcggacactg atgtgtggct ttatcgccgg aattgctctg ccggcgacag
    36421 ttgcaggtta ccactggatg aaggcagagc ccccttccac gctggcttac cctacatctc
    36481 aggaatggag agctgaacca gtaaccgaca cagagacacc acgcccacat acggaacatc
    36541 atgttaacag catcccggcc cgcccggctc ccacacagca ggaaccttct tctgcccccg
    36601 ccccgacggc agtgacggaa gaacaacacg ttcaggccgc tgaggcccgc cgtaatctgg
    36661 ccacagtact taaacgcaac gcagaccggg ggatgttcac cattaacctg tccactggtc
    36721 atgaacgcac gctgtacgcc ttccttgacc ccgcatgcat caactgccgt ctgctggaac
    36781 ccgcgcttaa gcaactggcc cgggaattca gcgtggtgat ttatccggtc tccgtgattg
    36841 gcggggagtc cagtacaaag cggactgctc cgctgctgtg tgaaccggac tcacaaaaac
    36901 gggcgaccgg atggcatcag ctgtattccg ctgacagtgg tatggccccc accggcgatg
    36961 caccggccgc acaggatgga cagtgtctga ccgccgcacg tgctgccatc gatgtcaata
    37021 accaggcttt ccgccagttc ggttttggcg gaaccccctg ggtgttatca gataccggct
    37081 ggcacctgcc gtccggcatc ctgaaagacg ccacttccgt tcgcctcttc ctgaaagcaa
    37141 cagatagcga ggagtatcac aatgagccag caccacgtta atcctgacct catacaccgc
    37201 acggcctggg gaaacccgtt gtggaatgca ctgcataacc tgaacatcac tggtctgtgt
    37261 ctggccggca gtatcattac ggcgctgata tggccactgg cccttcctgt ctgcctgctg
    37321 ttcaccctgg tcacctccgt gatattcatg ctgcaacgct ggcgatgccc cctgcgtatg
    37381 cccatgacac tcagccttga tgacccctcc caggacagaa aggtcaggag aagcctcttc
    37441 agcttctggc ccaccctgtt tcagtatgaa gcggatgaaa cattccccgc ccgggggatt
    37501 ttttatgtcg gttaccgccg tatcaacgat atcggtcgtg agctctggct gagcatggat
    37561 gacctcaccc ggcatgtcat gttttttgcc accaccggtg gcggtaaaac agaaaccacc
    37621 tttgcctggc tgctcaaccc gctctgctgg ggaagaggct ttacctttgt tgacggaaag
    37681 gcacagaacg ataccacgag gacaatctgg tatctctccc gacgttttgg cagggaggat
    37741 gatatcgaag tcatcaactt catgaacggc ggaaaatccc gcagtgaaat cattcagagc
    37801 ggcgaaaaat cccgcccaca gtcaaacacc tggaacccgt tcgcattcag caccgaagcc
    37861 ttcaccgccg aaaccatgca gtccatgctg ccccagaacg ttcagggggg agaatggcag
    37921 tcacgggcga tagccatgaa caaagccctg gtctttggca caaaattctg gtgcgtccgg
    37981 gaaagaaaaa ccatgtccct gcagatgtta cgggaacata tgacgctgga agggatggca
    38041 aaactctatt gccgtggcct tgatgaccag tggccggaag aagctatcac accactgcga
    38101 aactacctgc aggatgtccc gggattcgat atgtcactgg tgagaacgcc gtcagcctgg
    38161 actgaggagc cccgtaaaca gcatgcttat ctctccggtc agttctcgga aacattcaca
    38221 acctttgccg aaaccttcgg ggacgtcttt gcggcagatg ccggcgacat cgatattcgc
    38281 gacagtatcc acagcgaccg aattctgatt gtgatgatcc ccgcactgga cacatcagcc
    38341 cataccacgt cggcactcgg tcgtatgttc atcacccagc agagcatgat cctcgcccgt
    38401 gacctgggct accgcctgga aggcacagac gcacagaccc tggaagtcaa aaaatacaaa
    38461 ggccgcttcc cctatatctg tatccttgac gaagtcggtg cctactacac ggaccgcatt
    38521 gcagtggagg ccacccaggt acgttcactg gagttctccc tgataatgac ggcgcaggat
    38581 caggagcgaa tcgaagggca gacttctgcc accaacaccg ccacgctgat gcagaacgcc
    38641 ggcaccaaat tcgccggacg cattgtcagt gacgacaaaa cagcaaggac ggtgaaaaat
    38701 gccgccggtg aagaggcccg cgccagaatg ggcagcctgc agcgccacga tggtgtgatg
    38761 ggtgagtcct gggtggacgg taaccagatc acaatccaga tggaaagcaa aatcaacgtg
    38821 caggatttga tcagactgaa tgccggtgag ttctttaccg ttttccaggg ggatgtggtg
    38881 ccgtcagcct ctgtgtatat tccggacagc gagaaaagtt gcgacagtga tccagtggtc
    38941 atcaaccgtt atatctccgt tgaagccccc cgactggagc gtctccgccg tcttgtcccc
    39001 aggacagtgc agcgcaggct ccccacaccg gagcatgtca gcagcattat cggtgtgctg
    39061 acagaaaaaa cctcccggaa acgtcgtaaa aaacacacag agccttaccg aatcatcgat
    39121 accttccagg accagcttaa aagaacacaa acatcgctgg atctgcttcc gcaatatgat
    39181 acagatatcg aatcccgggc aaacgaactg tggaaaaagg ctgtgcacac tatcaataac
    39241 acaaccaggg aagaacgccg ggtatgttat atcacactga atcgtccgga agaggaacac
    39301 tctggtcctg aagatatacc ttcagtgaag gcgattctga atactctgct ccccctggag
    39361 atgctgttac ctgtaccgga tctaactgca tccccgcccc ataaaaaaaa tgtcgctcag
    39421 acaccatcag gtggaaaaca agagagtcgt aaaaaaagat tctgataaca cctgtatggc
    39481 tgattttaat aacaaccttt acgcgattat taatctcctc cgctcaccat agtaagcgga
    39541 ggattcagga tttcaatcca tcaccagagg tacaataaat gtgtattagt agcccggaaa
    39601 caaactcatg gtctgttatt tatcgtaaaa attccggaga agatatcaat atcacttccc
    39661 tgacgtttaa aaatagtctt ctggcagccc ggacactgat ggtgcccgaa aactatatga
    39721 tatgcatact cagaaatggg gagagggtca gacgatggga cagagaaata cttgcaggct
    39781 caaacagatg gtacaagtgt tctcccgata atttcgaaat actgggtaag ctccccataa
    39841 taaataaagt cacaacactg ataaaatcat aatctacgga ttttaatcag ttaagctaaa
    39901 tcaggatgaa cgctttgatt atgaattata catgaaaaca aatatgggca gcacaaaaaa
    39961 tggtgccagg gttccccacg ttcgtaatag attcacttct atggatattg gtatgaattc
    40021 ccagatcctg ccagacatgc tgattaattt tgcccttatt aacatcacag acagaaagaa
    40081 cgagggtacc aataccattg atggtaactg gcaggccgat gaaagacgcc gttaccggga
    40141 taatgtaaga atctattttt gagtatgtca acataacctg aggcaaagta cctcaggttc
    40201 cagtgtagta atcagccaac ctgacagtct tctgttagcc ctacagatat gtcgtggagc
    40261 taaccgcgca tgtcaaagcc ggatttttga aaatctctat aaacttccgg attgttgaag
    40321 gccgggaatt tagctttatg ggctgctgac tttatcgctt cgcaataggc tttatcgcca
    40381 ttactggttg atatttttaa cgccgtgcca tcccgggaga attccatatg caacctgcat
    40441 tttttccttt tccatttttg cggatcatca agtttagcat taattgcatc cctgattccc
    40501 cgtgcctgct ccccccattc atcctgatca tcccaacgtc ctgaactgca actacccagg
    40561 gctgtagttt tatggcaatt tgaaggatgt aatggcgcac atcccgccac aaagctgact
    40621 aaaatagcca gcataacgat tttctttacc cccatatatt gctcctcaat ccatatagat
    40681 ctcagtacca tagctctgtc agagcaaaga aaatcttaac taatacaagt taagattttt
    40741 aatatccact cctcatccct acattccagg tgatggtggc gtccactcat tatcctgaac
    40801 tggagcataa gatgcgccat gccccccgga tatgcttttc tgttgcctga tatattcgtg
    40861 gtagtactgt tcactacgct gacgatgtaa atccacatcc gggcggctga ttacaaagtg
    40921 tccacttccg gttattccag ctgcattatg ccaggccacc atttccgcaa atacatcatt
    40981 aaactgttga tatgagcctt ccggttcaaa acccattctt ggctcacgat caaacaatac
    41041 aggagcaatc agattcagct tatccaccag ttcatttctg tcctgatgat ggtagaacac
    41101 cacacggtcc ccataatcca cacagactaa ctcgccattc ctccgatcac gaaaacgcac
    41161 actgccatct ttctgcagac gggcttcgag aacgccagtg tcttcataaa gtggagttcc
    41221 tcccggttca cagagaatca cgcagcggtc ggcattcgtt gttcgtcgct tgtctttgcg
    41281 acgatcacga taatcccagc cacgtaactg tgataatgca gctctgtctc cctgtaccgc
    41341 ctgttgctcc acccactgcc ggtaggacaa aggataccac ttaccctccg caatcagtga
    41401 caaccgctct tccttcacac tctccttcag cctgatcagc gcctgcatac gctgcacttc
    41461 tgcaatatgg taatgcagct tacgcaattg tggatcccgg aactgcacac ggatatacgc
    41521 cttgcgccga cggcaggcag catgaatttc ccgtaaccgt tctccgtaac gtaagtcggg
    41581 tttacgccag tgctccttcc atgcaagata acgcgcgcgc aaatcttccc gcgcagctgc
    41641 acgggcttca cggcgttcac gacgcagtac aggatcgcgc cggaagccga gctccacttc
    41701 atcgctggca gcaagttccg gattgtagcg acattcaggc ttcacccgtt caaatatatc
    41761 tgcacctgca atctcaaatg gccctgcctg cggctcagcc ctggataacg tcaaatccgg
    41821 gtggatactg ctggccttca ctggtgtgag ctcatgatta aacgcatcca caatcacaag
    41881 accatgatgc tgtttctgca acataagccc tttacgcgca aacatctcat ggcacgcctg
    41941 ccagctgaaa ttcccgcccg cgatcatatc ttcaatcaac gactcacact gaacagtcgt
    42001 gtacccccac agactttcct tatcggaaaa cagttcgcgc tttattgctc cctgtggacc
    42061 tgtccccatc cgaatacgat accattcgta atcactgaca gcctgagtac caagattacg
    42121 tccccggaat cgttctccgg gtataacctg agtaaaaata tccttcggta caggctgcca
    42181 tccaccatcc agatcctgca tataatccag cgtcattaac ggccacacac tgtctgcacg
    42241 tactggtgtc tgttgtttat caaatccatc atgcagtacc agatgcccgt gctggatccc
    42301 catccataat ccagcctttg ccagagttct gtgcacatcc aggcaacttt ccagctcacc
    42361 atttctcgcc atttccggta agcgttcggc aaaatgacgg caggcgtact gtttcagact
    42421 ctccgtttct gccacttttt ccggccggat atcaacgttt atggcttccg gatcataacg
    42481 accgggtgtc cccacctgac tgaaaatatc tgtcggtaca ggctgatatt cccccagttt
    42541 ccgccccagt ttttcagctg tccatgacgg tccgaacgaa ctgagtgcaa caccttcccg
    42601 cgctctgtcc cagccatcct tcaccaccag ttccccttcc tgcatcgtga tatacagacc
    42661 atcactggcc agccgtttat gcaaagacaa ccagtcttgt gcgggctctt cacgcagccc
    42721 ggcaatcgac atctgcgcaa tatattccct gaacgtctgc tttttcccgc gtcgccaggc
    42781 attacggcgc tcacgtacca gcgctgtttt gcgcacaata cggttgccgg gtgcatgcac
    42841 aaagcagcca ttatcaggcg cgaatccgtg cttaagttca agttcacgac atgcacggct
    42901 gagtttttcc tggctccagg aaagccagtt aatataacca gtttcaggat gtacacgatt
    42961 cacggcaaca tgcacatgca gattatccgt gtccgtatga acggcagcca cgtactgatg
    43021 ttttgagagt tcaagagatt tcagtgtgtg acgcacacag tcaaaaagct gctcaggacg
    43081 cgggctttca tgcgcaggcc aggaaagaat gtagtggaaa acggggtctg tatcattacg
    43141 ggaaaaaaca gctttgtccg ccttgtactg catctcttca gcagctgttt ccagtgaatt
    43201 gcagttatgg aaacaggtta cgccatagaa atttacccac tgactgccgt ccttcatcac
    43261 atcaatcagg gagacaaatt tttcgttacg caggcgtgtt gcataatcaa caagccgtct
    43321 gaaacggttg cggtgaggga catcactctt gatttcgctg tcttctgtga gctcattttc
    43381 ctgcacatca tcccgcacag acgtgtacgc aatcaggtct tcaaaggaag acctgccgtc
    43441 acgtcttttg tgcggaataa tggcattcat cagcagttat ctcagcgtcc cattaagtct
    43501 cttcgcagag cattgacata ttcagtaatg gcaacaagaa cctctgcata ctccttatca
    43561 ccagtgcgtt ttccctccac aaacagatgc ttctgaaggc ggccaagacg cataatctca
    43621 tcaatcatac ggtcgtcagt acggcagtta accaccttat ccagtgaaga acttcgtata
    43681 aatgttgaaa ccgtctgtcc acttgactcc gctttttctc ttacgatttc agcctcatcc
    43741 tccgtgaatc tcgccgtgaa ttttacaatt ctcttcctgt tctcactgcc cgttcgggtt
    43801 ttcttctcac tcatggtctg ctccttaccg gggtgtcggg gcaaagccct gaccaggtgg
    43861 ggaatgtctg agtgcgcgtg cgcggtccga cattcccaca tcctgtcccg tttttcaggc
    43921 cattatagcc tgttattttt gtgcatcata gtcttatgca gacggcagag gcagggcgca
    43981 gccctgccag gagtcagttt ttggtgataa aatcaggctt caatattaaa cggagagaaa
    44041 gtgccaatgg cgtctaaaaa attttactca gatgatgaca tccagctggc aaaagctgct
    44101 ttatcggaat tgccagatct caccgctcaa cggaaaacat tgcgtgattt tcttgatgcc
    44161 attcgtgatg acattattgt cctggtaagg acaaagggtt atacactggc agatgttcgt
    44221 aacacgctca aaaatgcagg gtatgaagta ggagagaaag cacttcgtga cattattcgg
    44281 gaagcagaat cgaaaaaacc atcccgccgt tcttcctcta aaacagcacc taaaaagaca
    44341 gattcaggca ggaaagatgg catcgatatg aacaacaatt gatgtgacaa tgtcacatcg
    44401 tgttctgaga ttatgatgat tacagaaaaa aaagccccgg cataaatacc agggcttttc
    44461 tgtttaatca gactcgtggc ggcaatacac ctggataatg ccgtgcaata atatcattca
    44521 gtttttcaac aaggtcagaa cgcttaaaga caatatgtac ggtccctttc tggtagccac
    44581 gcaccgtaaa atattcccct tctaacagct taccgacatt atcgccgttc ccgagaaatt
    44641 caccatactg cgccccgatg ctgttcctga agtcaggaac gttgcgcccc tccagcagat
    44701 aaaacggacg taccaggtca tccagtgcct cccgtccgct gcagtccagc gtcacacgcc
    44761 cgttactcca gcggtacagc aggttttcaa taatgatttt cttgcccaga cggcagggat
    44821 tattggttct gtaatcccat gacaatttcc ggtagacatc aatcagtccc tgttcaaacg
    44881 tctgcatctt gctggcattc agatggcgga atgttgccag tacattgtcc agggtgattt
    44941 caggacaggt gtcgctcatc agctggctgt tccactcatc acgctggcat gaactcatga
    45001 aggtgtacat gcccgtatct gtcatcaggc ggtcccagat tttccggtcg gcaagacgga
    45061 tgatattcct tttcgcttct tccggtttat ccatgcatcg aacggagtca gtcacacagt
    45121 cttcaaaccc gtagagaaaa atgtcaccgg aagcatcgag cagaatcctg cgcgctgtcg
    45181 ccaggcattc catcgcctgc atgaacagtg caataccttc gttacgctgc gcgatgatgc
    45241 ggtcgatagc cacagacgga ataacatctg tcgtgccggc agtattcagg tcagcagtgg
    45301 gtaaagcctg attcatcaca ttgtctcctc atcgtcacga ctgccgggtc agccaggtca
    45361 tttcccggag gagcgaagct ccttctgccg tccgggtctt agggtatttc cccgcagtgg
    45421 acctttccga cgggggacgc tcaccacgtc acggggcagt tgtccggggg cagatgcaaa
    45481 agtttttgac gccagcggca aaaagttttg tggctggtac atctctcccc tggacgactg
    45541 aaacgggatg tggtcgtgta tgtacccccg gaaagtccgt ctgcggagaa caggccgcag
    45601 tgcggcggca gacaggcaga gacagctgcg ccatcaggcg cagtggcctt acacaccgtc
    45661 aggtgtgcag ggagcgccgc atacggcgcg actgaagaaa aacgacggca caacaatggc
    45721 atgtggtggt cactgatgca ccactcccgc acaggtgaaa acagagaaaa cagcacgaca
    45781 tttgcaacta gaaaagtgaa atttcttcac tttttcactc ttatttttcg cgctgaattg
    45841 gtgattataa tgataaaata aaatgaagtt ttttcacttt ttaaaaggta ctttatgacc
    45901 ggctgggaac tgcgaatctg gcgaaaaagc atgctctggt cacgcgaaaa agcgtccaga
    45961 gaatttggca taacacagag aacatggcac gcctgggaaa atgcggaaca ggtggacgtc
    46021 accgtctgga ggaccaccca ggcactttca gtccgtgacc tgctgcctca catgcagggg
    46081 atgcgcaagg cagatatcat caggcgtctg gaaaatgaac tgggggaaac ggcagaggat
    46141 gtgtgagcgt gattcacagc ctggctgaat gccaggctac tgctcatcag gaaacagctt
    46201 tttcagttct tcaccggaaa gtcccgtgac ctcctgaatc cgttccggcg gccagcctat
    46261 atcccgcagc cggcaggcta tttcccgcgc cacttcaaga accccttgtt taaaaccttg
    46321 tttaaaacct tctttaaaac cctcgtcgaa acctttctgt ataagacgtt ctgcaatcgt
    46381 catgctgttt gctctgctcc tgctgacaaa aaagcccggg attttgccgg gctttgtggt
    46441 tctcatcagt gagtgatttt cttcagttcg tcatcggaaa gtccggtagc ctgcttaatc
    46501 tgttccggcg tcatccccat tttctgaagc tggcacgcaa tagccagggc tttttcaagc
    46561 gctccttcca tgcgtccttc catgcgtcct tccatgcgtc cttccatcct gccttcctgg
    46621 cgaccttttt gctcaagacg ttctgcgata gtcatcagtt tatcctcatg ctgcggcaga
    46681 cgctcagcca gcgcccgcat aaattccggt gatacagagt cccctgcgtt aacgatgtaa
    46741 tgaatcagaa cacgcacctg ctcgtctgaa atttccacca tgacctgcgg gagtttgtcc
    46801 agcagctcca tcatgtcacg atggcggata tgcttcatca gcagcgtcag tgcggccatc
    46861 cggcgatggt tcatgatttc attgtcatca acgacagtga tatcaaccag cggaaacggc
    46921 tttgtgtata ttttagccgc aagtgccgga ttctcaaaac agtccagcca gttcatgctg
    46981 tacgggtacg ggctgcgctc accgtgatag aacagcaccg gaatcaccag tggcaacgtt
    47041 ttgtgctgct ccagatgtct ctgcatcgcc gccacactgt agcgtaacat gcgaaaaggc
    47101 atgtacagat tttcggtgct ctggtgctcg atgagcgtat aaacatagcc gtcttcaccc
    47161 ccggtagttt tcacgctcca gaggatatcg ctggcgtact gatgcaggtc cggctctaca
    47221 aaggtggcgg gttccagctt cagcgtggac aggtcgcaca actgccggta ctccgccgga
    47281 agatgcagtt ccagaaaatc tctggcgacg tcgggattcg ccaggaacga ccggaacgcg
    47341 gcatcatgcg gcgtaggcgt cgtggtgttt ttcttcttac tcacggttcc tccatcaaat
    47401 cagcagcatc gcagcaatca tcgcccaaat ccccacaacc gagaggacag caattgcgtt
    47461 caaagccatg acaacaatag ccgcgttctg agtcacggcg tatttcttca gcaatctctt
    47521 ctgcggaaag gtaatcaaac tcctcacggg ccagttccag gaccagtaga tgttgttctg
    47581 tcggcaatgt ggccacaaaa ttatcaatag cagcactcaa acgtcgctga tatagctcat
    47641 aaacaagacc acaacggggc attagttctt cggataatag ttccagtttt gagcgaattc
    47701 tgtcagcgtt gaaagtgact tcatcaaaag acatatgaaa agctttgtca gtatcaaaac
    47761 aagacttcat tgtgaaccgc cccggggatc ctggagacta aactccctga gaaagaggta
    47821 aacaggatga ctaaaaatac tcgtttttcc cccgaagtcc gtca
//
LOCUS       DAJVUK010000008        47217 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.008, whole genome shotgun sequence.
ACCESSION   DAJVUK010000008 DAJVUK010000000
VERSION     DAJVUK010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 47217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47217
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.008"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            27..764
                     /locus_tag="OQQ57_000513"
     CDS             27..764
                     /locus_tag="OQQ57_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HCS1955387.1"
                     /translation="MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRF
                     IFPADRESISILLANTSQESWLINSKINRPTRWAGGKASTVPAPLLAAPPLILLKPGT
                     TGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG
                     DPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQ
                     AIAPCHVAWRAINDYDGLSAKKEQNLP"
     gene            875..1885
                     /gene="pyrD"
                     /locus_tag="OQQ57_000514"
     CDS             875..1885
                     /gene="pyrD"
                     /locus_tag="OQQ57_000514"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HCS1955388.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            2059..2601
                     /gene="zapC"
                     /locus_tag="OQQ57_000515"
     CDS             2059..2601
                     /gene="zapC"
                     /locus_tag="OQQ57_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HCS1955389.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNVLVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="OQQ57_000516"
     CDS             complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="OQQ57_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HCS1955390.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     ILEGEVSPLKKSAMGDDGTILCCSCVPKTALKLAR"
     gene            3951..6059
                     /gene="rlmKL"
                     /locus_tag="OQQ57_000517"
     CDS             3951..6059
                     /gene="rlmKL"
                     /locus_tag="OQQ57_000517"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HCS1955391.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPLKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYSDWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGALSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            6071..7978
                     /locus_tag="OQQ57_000518"
     CDS             6071..7978
                     /locus_tag="OQQ57_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1955392.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIVLIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNIAEGKQEVMVNGKPRHVLSYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            8108..9361
                     /gene="pqiA"
                     /locus_tag="OQQ57_000519"
     CDS             8108..9361
                     /gene="pqiA"
                     /locus_tag="OQQ57_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HCS1955393.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
                     FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            9366..11006
                     /gene="pqiB"
                     /locus_tag="OQQ57_000520"
     CDS             9366..11006
                     /gene="pqiB"
                     /locus_tag="OQQ57_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706874.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HCS1955394.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            11003..11566
                     /gene="pqiC"
                     /locus_tag="OQQ57_000521"
     CDS             11003..11566
                     /gene="pqiC"
                     /locus_tag="OQQ57_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HCS1955395.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
                     LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSVQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLAGVWSQEAASIAQEIKRLP"
     gene            11822..11989
                     /gene="rmf"
                     /locus_tag="OQQ57_000522"
     CDS             11822..11989
                     /gene="rmf"
                     /locus_tag="OQQ57_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HCS1955396.1"
                     /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW
                     REAMADRVVMA"
     gene            complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="OQQ57_000523"
     CDS             complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="OQQ57_000523"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HCS1955397.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(12646..14406)
                     /locus_tag="OQQ57_000524"
     CDS             complement(12646..14406)
                     /locus_tag="OQQ57_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HCS1955398.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLR
                     HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            14592..15044
                     /gene="matP"
                     /locus_tag="OQQ57_000525"
     CDS             14592..15044
                     /gene="matP"
                     /locus_tag="OQQ57_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HCS1955399.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKLDLQALLGKE"
     gene            complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="OQQ57_000526"
     CDS             complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="OQQ57_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HCS1955400.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA
                     KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL
                     EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK
                     SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER
                     RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV
                     KGIKDVVTQPQA"
     gene            complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="OQQ57_000527"
     CDS             complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="OQQ57_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HCS1955401.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
                     MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            17245..17874
                     /gene="sxy"
                     /locus_tag="OQQ57_000528"
     CDS             17245..17874
                     /gene="sxy"
                     /locus_tag="OQQ57_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HCS1955402.1"
                     /translation="MKSLSYKRIYKSQEYLAMLGTIEYRSLFGSYSLTVDDTVFAMVS
                     DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS
                     LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
                     SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE"
     gene            complement(17837..19999)
                     /gene="yccS"
                     /locus_tag="OQQ57_000529"
     CDS             complement(17837..19999)
                     /gene="yccS"
                     /locus_tag="OQQ57_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HCS1955403.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGLLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGFWILLTSLFVCQPNYNATRHRLKLRIIGTLV
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(20009..20455)
                     /locus_tag="OQQ57_000530"
     CDS             complement(20009..20455)
                     /locus_tag="OQQ57_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HCS1955404.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
     gene            20578..22632
                     /gene="helD"
                     /locus_tag="OQQ57_000531"
     CDS             20578..22632
                     /gene="helD"
                     /locus_tag="OQQ57_000531"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HCS1955405.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ
                     AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA
                     GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH
                     ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ
                     WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM
                     APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL
                     AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI
                     GKVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL
                     ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES
                     IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR
                     KP"
     gene            complement(22664..23122)
                     /gene="mgsA"
                     /locus_tag="OQQ57_000532"
     CDS             complement(22664..23122)
                     /gene="mgsA"
                     /locus_tag="OQQ57_000532"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HCS1955406.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(23218..23880)
                     /locus_tag="OQQ57_000533"
     CDS             complement(23218..23880)
                     /locus_tag="OQQ57_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HCS1955407.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            24053..24466
                     /locus_tag="OQQ57_000534"
     CDS             24053..24466
                     /locus_tag="OQQ57_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HCS1955408.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            complement(24511..24828)
                     /gene="hspQ"
                     /locus_tag="OQQ57_000535"
     CDS             complement(24511..24828)
                     /gene="hspQ"
                     /locus_tag="OQQ57_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HCS1955409.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(24886..26076)
                     /gene="rlmI"
                     /locus_tag="OQQ57_000536"
     CDS             complement(24886..26076)
                     /gene="rlmI"
                     /locus_tag="OQQ57_000536"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HCS1955410.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALVSALQTLYPECAIYDRSDVA
                     VRKKEGMELTLGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            26171..26449
                     /gene="yccX"
                     /locus_tag="OQQ57_000537"
     CDS             26171..26449
                     /gene="yccX"
                     /locus_tag="OQQ57_000537"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HCS1955411.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR"
     gene            complement(26446..26775)
                     /gene="tusE"
                     /locus_tag="OQQ57_000538"
     CDS             complement(26446..26775)
                     /gene="tusE"
                     /locus_tag="OQQ57_000538"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HCS1955412.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(26866..27525)
                     /gene="yccA"
                     /locus_tag="OQQ57_000539"
     CDS             complement(26866..27525)
                     /gene="yccA"
                     /locus_tag="OQQ57_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HCS1955413.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIVHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            complement(27732..27819)
                     /locus_tag="OQQ57_000540"
     tRNA            complement(27732..27819)
                     /locus_tag="OQQ57_000540"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(27783..27785),aa:Ser,seq:tga)
     gene            28246..29364
                     /gene="hyaA"
                     /locus_tag="OQQ57_000541"
     CDS             28246..29364
                     /gene="hyaA"
                     /locus_tag="OQQ57_000541"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HCS1955414.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
                     EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            29361..31154
                     /gene="hyaB"
                     /locus_tag="OQQ57_000542"
                     /pseudo
     CDS             29361..31154
                     /gene="hyaB"
                     /locus_tag="OQQ57_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
     gene            31173..31880
                     /gene="hyaC"
                     /locus_tag="OQQ57_000543"
     CDS             31173..31880
                     /gene="hyaC"
                     /locus_tag="OQQ57_000543"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HCS1955415.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDGTVISTMV
                     NGYRSHKFGKISNKECS"
     gene            31877..32464
                     /locus_tag="OQQ57_000544"
     CDS             31877..32464
                     /locus_tag="OQQ57_000544"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HCS1955416.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLLAAEQSALAQLAAWGSVP
                     QLANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            32461..32859
                     /gene="hyaE"
                     /locus_tag="OQQ57_000545"
     CDS             32461..32859
                     /gene="hyaE"
                     /locus_tag="OQQ57_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HCS1955417.1"
                     /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            32856..33713
                     /locus_tag="OQQ57_000546"
     CDS             32856..33713
                     /locus_tag="OQQ57_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HCS1955418.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSKSEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            33847..35391
                     /gene="appC"
                     /locus_tag="OQQ57_000547"
     CDS             33847..35391
                     /gene="appC"
                     /locus_tag="OQQ57_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HCS1955419.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWAFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            35403..36539
                     /gene="appB"
                     /locus_tag="OQQ57_000548"
     CDS             35403..36539
                     /gene="appB"
                     /locus_tag="OQQ57_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCS1955420.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLSSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            36552..36644
                     /gene="cbdX"
                     /locus_tag="OQQ57_000549"
     CDS             36552..36644
                     /gene="cbdX"
                     /locus_tag="OQQ57_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HCS1955421.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            36724..38022
                     /gene="appA"
                     /locus_tag="OQQ57_000550"
     CDS             36724..38022
                     /gene="appA"
                     /locus_tag="OQQ57_000550"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acid phosphatase/4-phytase"
                     /protein_id="HCS1955422.1"
                     /translation="MKAILIPFLSLLIPLTSQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYFGHYQRQRLVADGLLAKKGCPQP
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA
                     NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLDLIMAALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(38137..40317)
                     /gene="etk"
                     /locus_tag="OQQ57_000551"
     CDS             complement(38137..40317)
                     /gene="etk"
                     /locus_tag="OQQ57_000551"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HCS1955423.1"
                     /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(40337..40783)
                     /gene="etp"
                     /locus_tag="OQQ57_000552"
                     /gene_synonym="yccY"
     CDS             complement(40337..40783)
                     /gene="etp"
                     /locus_tag="OQQ57_000552"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HCS1955424.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            complement(40771..41910)
                     /locus_tag="OQQ57_000553"
     CDS             complement(40771..41910)
                     /locus_tag="OQQ57_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HCS1955425.1"
                     /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQY
                     DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            complement(41956..44052)
                     /locus_tag="OQQ57_000554"
     CDS             complement(41956..44052)
                     /locus_tag="OQQ57_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HCS1955426.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVNDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            complement(44052..44798)
                     /locus_tag="OQQ57_000555"
     CDS             complement(44052..44798)
                     /locus_tag="OQQ57_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HCS1955427.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPMEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
                     VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVDPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            complement(44795..45439)
                     /gene="gfcB"
                     /locus_tag="OQQ57_000556"
     CDS             complement(44795..45439)
                     /gene="gfcB"
                     /locus_tag="OQQ57_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein GfcB"
                     /protein_id="HCS1955428.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
     gene            complement(45546..45851)
                     /locus_tag="OQQ57_000557"
     CDS             complement(45546..45851)
                     /locus_tag="OQQ57_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-rich inner membrane protein GfcA"
                     /protein_id="HCS1955429.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG
                     ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR"
     gene            complement(46293..46505)
                     /gene="cspH"
                     /locus_tag="OQQ57_000558"
     CDS             complement(46293..46505)
                     /gene="cspH"
                     /locus_tag="OQQ57_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HCS1955430.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            46791..47003
                     /gene="cspG"
                     /locus_tag="OQQ57_000559"
     CDS             46791..47003
                     /gene="cspG"
                     /locus_tag="OQQ57_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HCS1955431.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            47014..47202
                     /locus_tag="OQQ57_000560"
     CDS             47014..47202
                     /locus_tag="OQQ57_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCS1955432.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVTLQIRTDHAPLDFTK"
BASE COUNT        11627 a        11731 c        12411 g        11448 t
ORIGIN      
        1 tagcgatgtg cagtcgggta aagtgaatgc cagcgcgaca tttgtacttc attatgacta
       61 atacgtggaa cagattggcg ctcttgattt tcgccgtttt atcgctgctg gtggcgggtg
      121 aattgcgggc aggagtggtg gtcggcggaa cgcgatttat ctttccggca gacagagaat
      181 cgatatctat tttactggct aataccagtc aggaatcctg gctgattaac agtaaaatca
      241 accgcccaac gcgttgggcc ggggggaaag cgtcgacagt gccagcacca ttactggccg
      301 ctccgccact tattctcctg aagcccggta ctacaggcac gttgcgcttg ctgagaacgg
      361 aaagcgacat cttgcctgtg gatcgcgaaa cgctatttga gttaagcatt gccagcgtgc
      421 catccggcaa agttgaaaat cagagcgtaa aagtggcgat gcgctcggta tttaaactgt
      481 tctggcgacc cgaaggtttg ccgggcgacc cgctggaagc ttatcaacaa ttacgctgga
      541 cacggaattc gcagggtgta caactcacta acccaacgcc ttactacatt aacctgattc
      601 aggtgagcgt aaatggtaaa gcgttaagta atgcgggagt tgtgccgcct aaaagccagc
      661 gtcagacaag ctggtgtcag gcaatcgcac cgtgtcatgt cgcctggcgg gcgataaatg
      721 attacgacgg gttgagtgca aagaaggagc aaaatctgcc ctgaaacagg ttcggaaaac
      781 gtttgcgttt tttttgccgc aggtcaattc ccttttggtc cgaactcgca cataatacgt
      841 ccccggtttg cacaccggga atccaggaga gttcatgtac taccccttcg ttcgtaaagc
      901 ccttttccag ctcgatccag agcgcgctca tgagtttact tttcagcaat tacgccgtat
      961 tacaggaacg ccgtttgaag cactggtgcg gcagaaagtg cctgcgaaac ctgttaactg
     1021 catgggcctg acgtttaaaa atccgcttgg tctggcagcc ggtcttgata aagacgggga
     1081 gtgcattgac gcgttaggcg cgatgggatt tggatcgatc gagatcggta ccgtcacgcc
     1141 acgtccacag ccaggtaatg acaagccgcg tctctttcgt ctggtagatg ccgaaggttt
     1201 gatcaaccgt atgggcttta ataatcttgg cgttgataac ctcgtagaga acgtaaaaaa
     1261 ggcccattat gacggcgtcc tgggtattaa catcggcaaa aataaagata cgccagtgga
     1321 gcagggcaaa gatgactatc tgatttgtat ggaaaaaatc tatgcctatg cgggatatat
     1381 cgccatcaat atttcatcgc cgaatacccc aggattacgc acgctgcaat atggtgaagc
     1441 gctggatgat ctcttaaccg cgattaaaaa taagcaaaat gatttgcaag cgatgcacca
     1501 taaatatgtg ccgatcgcag tgaagatcgc gccggatctt tctgaagaag aattgatcca
     1561 ggttgccgat agtttagttc gccataatat tgatggcgtt attgcaacca ataccacact
     1621 cgatcgttct cttgttcagg gaatgaaaaa ttgcgatcaa accggtggct taagtggtcg
     1681 tccgcttcag ttaaaaagca ccgaaattat tcgccgcttg tcactggaat taaacggtcg
     1741 cttaccgatc atcggtgttg gcggcatcga ctcggttatc gctgcgcgtg aaaagattgc
     1801 tgcgggtgcc tcactggtgc aaatttattc tggttttatt tttaaaggtc cgccgctgat
     1861 taaagaaatc gttacccata tctaattatt tcttcgaatt cctctttata agataatcag
     1921 ggctttattt tcagccctgg ttgttttata ttcatcgctg ttgcttattt agacattttg
     1981 tacttttatt gttgaggtta ttaagcgaag cgacaatgga ttgtgttgct gcggttttat
     2041 agggtagggg agaggcagat gcgaattaaa ccagacgata actggcgttg gtattacgat
     2101 gaagagcacg atcgaatgat gctcgattta gccaatggta tgctatttcg ctcacgtttt
     2161 gcgcgcaaga tgttgactcc agatgccttt tctcccgcag gcttttgcgt tgacgacgcc
     2221 gcgctctatt tctcttttga agaaaagtgc cgcgatttta atttatctaa agaacaaaaa
     2281 gccgaactgg tgctgaatgt actggtagca attcgctatc tcaaaccgca aatgccgaaa
     2341 agctggcatt ttgtttccca tggtgaaatg tgggtgccca tgccgggcga tgcggcctgc
     2401 gtttggttga gcgatactca cgagcaggtc aatttgctgg tcgttgaatc tggcgaaaat
     2461 gccgcactat gcctgctggc acaaccctgc gttgttattg cgggtcgcgc gatgcagttg
     2521 ggcgacgcca ttaaaatcat gaacgacagg ctgaaaccgc aggttaatgt tgacagcttc
     2581 agcctcgaac aggcagtcta acgcgccaac ttaagtgcag tcttcggtac acagctacag
     2641 caaagaatgg tgccatcatc gcccattgct gattttttca gcggcgagac ttcgccttct
     2701 aaaatctgaa cacggcaact tccacaaatg cccgcgcggc aagaataagg gatacgaatt
     2761 ccctgatttt ctaattgctc cagcaacacc tgttggttat ttccacgaaa tgcctgtccc
     2821 tgccagtcaa tatctacatt tgcgtccggt tgttgcgtga tgttggcggt atcatcagcg
     2881 gcagctgcgc cgtaaatttt tgccggagcc gttgccagaa tttccacctc atcgccaacg
     2941 cgaatcacgc cgctattacg ggcaattaaa ttctgaccaa aatcgacatc gccgttatcc
     3001 tgggcagtgc ggaaagattg caatgttttt aatggttcgc ctgccggatg tttttgccct
     3061 ttttctgggc tgacggtggt gaaaatacag cggctacaag gtttaaccac atcaaacacc
     3121 acatcaccaa tgcgaatcac tttccagcga tcttcttccc aggctgacgc gccggaaacc
     3181 accagattgg ggcggaattg ctccattttt acactggccg gacaacgttg ttggagatca
     3241 cgtaacgagg cttcgttagc aagaaggtaa ggatagccat cagcaaatga cagaggtaca
     3301 gtgttgtggc gtttcacgcg ccgggtcatt tgtggcccca cccagcgtaa ttgcacttcg
     3361 cgggagaaaa atccacttag ccatttgttg atcgcgtctg gcgcaattcg cgcggtaaaa
     3421 tgtgtgcccc aaacttcggt tggtgcgtct tgtgtggcga aatcagcaaa acgaacatat
     3481 gcgctactgc catctggtgc ggtgagatgc aagccatcat gcacaggtga aggagtaaac
     3541 cgtaccatct ggggaaactg gcgagcggta ataaacgtac cgtcaggttc cgtgatcata
     3601 aagatgcgat cgaaggccag accactgaca tcagccagag catgtgtaag accaatgccg
     3661 cgcatcgatt taacaggatg aataaaaagc cgggttaatg tcgccacggt gcggtcctca
     3721 aatgaaaata agccctcaac tttatgacat gacgcgctta ttagctataa tgcgcaacaa
     3781 ttttcttagc gcctgtccca ttaggctatt ttatttgtca gtttggccct gggttgtgct
     3841 cgaaatcctc acgtacttgt gtacgctccg gtttctccgc gctgtccatg tccagactga
     3901 ctgcaacaat tacgcctact gcggtaggct cttagagtaa aagtgacgat atgaattctc
     3961 tgtttgccag tacggcccgt gggctggaag agctgttaaa aactgaactg gaaaacctgg
     4021 gggccgttga atgccaggtg gttcagggtg gggtccattt caagggcgac acacggcttg
     4081 tttaccagag cctgatgtgg agccgcctgg cctcgcgtat tatgttgccg ctgggcgagt
     4141 gtaaggttta cagcgattta gacctctatc tcggtgttca ggcgatcaac tggacagaga
     4201 tgtttaatcc tggcgcgacc ttcgctgtcc acttcagtgg tttgaatgac accatccgca
     4261 acagtcagta cggcgcgatg aaagtgaaag acgcgatcgt cgatgctttc acgcggaaaa
     4321 atctgccgcg tccaaatgtt gatcgcgatg cgccggatat ccgcgttaac gtctggctgc
     4381 ataaagaaac cgccagtatc gctcttgatc tgagtggtga tggtttacat ctgcgtggct
     4441 atcgcgatcg tgctggtatt gcgccgctca aagaaaccct ggcagccgct attgtgatgc
     4501 gatccggctg gcagcctgga acaccgctgc tcgatccgat gtgtggttcc ggtacgttgc
     4561 tgattgaagc ggcgatgctg gcgaccgatc gcgcacccgg cttgcaccgt gggcgttggg
     4621 gctttagcgg ctgggcgcag catgatgaag ctatctggca ggaagtgaaa gcggaagcgc
     4681 aaactcgcgc ccgtaaaggc ctggctgagt atagctctca tttttacggt tcggacagcg
     4741 acgcacgggt gattcaacgt gcacgcacta acgcccgtct tgcggggatt ggtgaactga
     4801 tcacctttga ggtgaaagat gtcgcgcaac tgaccaatcc gctgccgaaa gggccgtacg
     4861 gcacagtgtt gagcaacccg ccatacgggg aacgtctgga cagcgaaccg gcgctgattg
     4921 cgctgcatag cctgctgggt cggatcatga aaaaccagtt tggtggctgg aatctctctt
     4981 tgtttagtgc ctcgccggat ctgctaagct gcttgcagct gcgtgcagac aaacagtaca
     5041 aggcgaaaaa cggcccgctg gactgcgtac agaaaaatta ccacgttgcc gaaagcactc
     5101 cagacagcaa accggcgatg gtagcggaag actacgccaa ccgcctgcgt aagaacctca
     5161 aaaaattcga gaagtgggct cgccaggaag gaattgaatg ttaccgcctg tatgacgccg
     5221 atctgccgga atataacgtt gccgttgacc gttattccga ctgggtggtg gtgcaggagt
     5281 atgcaccgcc aaaaactatt gatgctcaca aagcgcgtca gcgtctgttc gatattatcg
     5341 ctgcaaccat ttcggtactg gggattgcgc caaacaaact ggtgctgaaa acccgtgaac
     5401 gccagaaggg caaaaaccag taccagaaac tgggcgagaa gggcgagttt cttgaagtta
     5461 ccgaatataa cgctcacttg tgggtgaacc tgacggatta tctcgatact ggtctgttcc
     5521 tcgatcaccg tatcgcccgc cgtatgctcg gtcagatgag caaaggcaaa gatttcctca
     5581 acctgttctc ttataccggt agcgccaccg tgcatgcggg attaggcggc gcgctcagca
     5641 ccaccaccgt ggatatgtcg cgtacttatc tggagtgggc agaacgcaac ctgcgtctga
     5701 atggcctaac cgggcgtgcg catcgcctga ttcaggccga ttgcctggcg tggctgcgtg
     5761 aggcaaatga acagtttgat ctgatcttta tcgatccgcc aaccttctct aactcaaaac
     5821 gaatggaaga tgcgtttgat gttcagcgcg atcatctggc gctgatgaaa gatttgaaac
     5881 gtctgctgcg tgcaggtggg acgatcatgt tctcgaacaa caaacgtggc ttccgtatgg
     5941 atctcgacgg cctggcaaaa ctgggactga aagcacaaga aattacgcaa aaaacgctct
     6001 cccaggattt cgcccgtaac cgccagatcc acaactgctg gctgattacc gcagcctgaa
     6061 aggaatagta atgtcattaa tcagtatgca tggcgcatgg ctgtcgttca gcgacgcgcc
     6121 gcttctcgat aacgcagaac tgcatatcga agataacgaa cgtgtttgtc tggtgggccg
     6181 caacggcgcg ggcaaatcga cgttaatgaa aatcctcaac cgtgaacaag ggctggatga
     6241 cggtcgcatt atttacgagc aagatttgat tgtagctcgt ctgcaacagg atccgccgcg
     6301 taacgttgag ggtagcgttt atgatttcgt tgccgaaggc attgaagaac aagcggaata
     6361 tctgaaacgc tatcacgata tttcgcgcct ggtgatgaac gacccgagcg agaaaaatct
     6421 caacgaactg gcgaaggttc aggaacagtt ggatcaccac aacctgtggc agctggaaaa
     6481 ccgcatcaac gaagtgctgg cgcaactggg gttagatcct aatgttgcgc tgtcgtcgct
     6541 ttccggcggc tggttgcgta aagcggcatt aggacgcgcg ctggtgagta atccgcgcgt
     6601 gctgttgctt gatgaaccga caaaccacct ggatattgaa accatcgact ggctggaagg
     6661 gttccttaaa accttcaatg ggacgattat tttcatctcc cacgaccgtt cgtttatccg
     6721 caatatggcg acgcgcattg ttgatctcga tcgcggcaag ctggtgacct atccagggaa
     6781 ttacgaccag tacctgcttg aaaaagaaga agccctgcgc gtggaagaac tacaaaatgc
     6841 cgagttcgat cgcaaactgg cgcaggaaga ggtgtggatc cgccagggga tcaaagcacg
     6901 ccgtacccgt aatgaaggcc gcgtacgcgc cctgaaagca atgcgtcgcg agcgtggtga
     6961 acgtcgcgaa gtgatgggta ccgcaaagat gcaggtggaa gaggccagcc gctccggtaa
     7021 gatcgttttc gaaatggaag acgtttgcta ccaggttgac ggtaagcaac tggtgaaaga
     7081 tttttcggcc caggttctac gtggcgacaa aattgtcctg attggtccga atgggtgcgg
     7141 caaaaccacg ctgctgaaac tgatgctcgg tcagcttcaa gcggacagcg ggcgtattca
     7201 cgttggcacc aaactggaag tggcttattt cgatcagcac cgcgcggaac tggatcccga
     7261 taaaacggtg atggataaca ttgccgaagg taagcaagag gtgatggtta acggcaagcc
     7321 acgccacgta ttgagctatt tgcaggactt tctgttccat ccgaaacggg cgatgacgcc
     7381 ggtacgtgcg ctttctggcg gtgagcggaa ccgcttgctg ctggcgcgtt tgttcctcaa
     7441 accaagcaac ttattgattc ttgacgaacc gaccaacgat cttgatgtcg aaacgctgga
     7501 actgctggaa gaactgatcg acagctatca gggcacggta ttgctggtta gccacgatcg
     7561 tcagtttgtc gataacaccg ttacagaatg ttggatcttc gaaggcggcg gtaaaattgg
     7621 tcgttatgtc ggcggttatc atgatgcccg tggtcagcaa gagcagtatg tggcgctcaa
     7681 acagcctgcg gtgaaaaaaa ccgaagaagc cgccgcggca aaagcagaaa ctgtaaaacg
     7741 cagcagtagc aaactaagct ataaattgca gcgcgaactg gagcagctac cgcaattgct
     7801 cgaagatctg gaggcgaagc tggaagccct acagacgcag gtggcggatg cttccttctt
     7861 cagtcagcca catgagcaga cacaaaaagt gctcgccgat atggctgctg cagagcagga
     7921 gctggagcaa gcctttgaac gctgggagta tcttgaagcg ttaaaaaatg gtggctgatc
     7981 gcaaaatagt cgatttaaac agagacagct gacaacggta aaattgcctg atgaactggg
     8041 tttatcaggc atgaaaacca acactttgtt agtcatctgt aaaatagcgc atcattaagg
     8101 agtaccaatg tgcgaacatc atcatgccgc gaagcacatc ctgtgctcgc agtgtgacat
     8161 gctggtggcg ttaccgcgcc ttgagcatgg tcagaaagcg gcatgtcccc ggtgtggcac
     8221 aacgttaacc gtggcgtggg atgcccctcg gcagcgtccg accgcctatg cgttggctgc
     8281 actgttcatg ctgttgctgt ccaacttgtt tccttttgtg aatatgaacg ttgcaggagt
     8341 taccagtgaa attacattac tggaaattcc cggcgtgctt ttttctgagg actacgccag
     8401 cctcggcacc tttttcctgt tgtttgtgca actggttccc gcgttttgtc tgataaccat
     8461 tctgttactg gtgaatcgcg cggaattacc ggtccgttta aaagagcaac tggcacgggt
     8521 gctttttcaa ctcaaaacct ggggaatggc ggagattttc ctcgcgggtg tgctggtcag
     8581 tttcgttaaa ctgatggctt acggcagcat tggggtaggc agcagctttc tcccctggtg
     8641 tttattttgt gtcctgcaac tgcgcgcttt tcagtgcgtt gatcgtcgct ggttatggga
     8701 cgacatcgcc ccgatgccag aactgcgcca gccgctaaaa ccaggcgtca cggggatacg
     8761 tcaggggctg cgttcgtgct cctgttgtac ggcaatcctt cctgctgatg aacccgtgtg
     8821 cccgcgttgt agtaccaaag ggtacgttcg gcgtagaaac agcctgcagt ggacactcgc
     8881 gctgcttgta acgtccatca tgctgtatct tccggctaat attttgccca tcatggtgac
     8941 ggatttatta ggctcgaaga tgccgtcgac gattctcgct ggggtcattc tgttatggag
     9001 cgaaggctct tatcccgtcg ctgcggtgat ctttctggcc agtattatgg tgccaacgtt
     9061 aaagatgatc gccatcgcgt ggctgtgttg ggatgccaaa gggcatggca agcgcgacag
     9121 tgaaagaatg catttgattt atgaagttgt tgagtttgta ggccgctggt cgatgattga
     9181 cgttttcgtt atcgcggtgc tctcggcgct ggtgcgtatg ggaggtttaa tgagtattta
     9241 tccggcaatg ggtgcattaa tgtttgcttt agtcgtcata atgacaatgt tttctgctat
     9301 gacgtttgac ccgcgtttgt cgtgggatcg tcaacctgaa tcagagcatg aggagtcctg
     9361 acagtatgga atctaataat ggggaagcca aaatccagaa agtgaagaac tggtctcccg
     9421 tgtggatatt tcctatcgtc acggcgctca ttggggcctg ggttctattt tatcattaca
     9481 gccatcaggg accggaagtg accctgatca ccgcgaatgc ggaaggaatt gaaggtggca
     9541 aaaccaccat taaaagccgt agcgttgacg tcggcgtggt tgaaagcgcc acactggctg
     9601 atgatttgac gcacgttgaa atcaaagcgc ggctgaattc cggtatggaa aaattgctgc
     9661 ataaagacac cgtcttttgg gtggtgaaac cgcagattgg tcgcgaaggg attagcggcc
     9721 tgggaacgct gctgtctgga gtttatatcg aactgcagcc aggcgcgaaa ggcagcaaaa
     9781 tggataaata cgatttgctg gactcgccac cgttggcccc gcctgatgcg aaaggtatcc
     9841 gtgtgattct cgatagcaaa aaagccgggc agctctcgcc aggagatccg gtgctgttcc
     9901 gtggctatcg ggtaggttcg gttgaaacca gcaccttcga tacgcaaaaa cgcaatatca
     9961 gttatcaact gttcatcaat gcaccttatg accgactggt gaccagcaat gttcgcttct
    10021 ggaaagatag tggcattgcg gttgatctga cgtcagcggg gatgcgtgtg gagatgggct
    10081 cattgacaac gctgcttagt ggcggtgtta gctttgatgt gccggaaggt ctggatttag
    10141 ggcagccagt ggcaccgaaa acagctttcg ttttgtatga tgatcagaag agcattcagg
    10201 attcgttgta caccgatcac attgattatc tgatgttctt taaagattcg gtacgcggtc
    10261 tgcaaccggg agctccggta gaattccggg gtattcgcct gggtaccgta agcaaagtgc
    10321 cattctttgc gccgaatatg cgtcagacat ttaacgatga ttaccgtatt ccggtactga
    10381 ttcgtatcga gccagagcgg ctgaaaatgc agcttggcga aaatacggat gttgttgagc
    10441 accttggcga attgttgaaa cgtggtttac gcggatcgct gaaaaccgga aacctggtca
    10501 ctggtgcact gtatgttgat ctcgatttct atccaaatac gcctgcaata accggtattc
    10561 gtgaatttaa tggttatcag attatcccga ctgttagcgg cggcctggcg caaatccagc
    10621 aacgactgat ggaagcgttg gataagatca acaaactgcc attgaatccg atgattgaac
    10681 aggcaaccag tacgctttct gaaagtcagc gcacaatgaa aaacctgcaa acgacgctgg
    10741 atagcatgaa caagatcctc gctagccagt cgatgcagca gttgccgacg gatatgcagt
    10801 caacgttgcg tgaattgaat cgcagcatgc agggcttcca gcctggctcc gcagcctaca
    10861 acaagatggt ggcggatatg cagcgccttg atcaggtgtt gcgagaactg caaccggtgc
    10921 tgaaaacgct caatgagaag agtaacgcgc tggtatttga agcgaaggac aaaaaagatc
    10981 cagagccgaa gagggcgaaa caatgaaaaa gtggctagtg acgattgcag cactgtggct
    11041 ggccggatgc agctccggcg aaattaataa aaactattac cagttacctg tggtgcagag
    11101 cggtacacaa agtaccgcca gccagggcaa tcgtctgtta tgggtagagc aggtcactgt
    11161 tcctgactat ctggcgggga atggtgtggt ttatcaaacc agtgatgtga agtatgtgat
    11221 tgccaacaac aacttgtggg ccagcccgtt ggatcaacag ttgcgcaaca ccctggttgc
    11281 caacctgagt acgcaactgc ccggctgggt ggttgcctcc cagcctctgg gaagcgtcca
    11341 ggacacgctc aatgttaccg taacggagtt taacggtcgc tatgatggca aggtcattgt
    11401 cagtggtgag tggctgttga accaccaggg acaactgatc aaacgtccgt tccgtctgga
    11461 aggagtgcaa actcaggatg gttacgatga gatggttaaa gtgctggccg gtgtctggag
    11521 tcaggaagcc gcttctattg cacaagagat aaagcgtcta ccttaattat aaagatttgt
    11581 aagtataacc gtctccggta tgttgcctga ggcggttttt ttgtttctaa cgtgcggaaa
    11641 aatttgttcc tcttcacatt ttttgtacaa ccgacatgcc cgtgtagctc acaaatatga
    11701 cagtggcgtg aattttgcgc attgacggca gttatgattc gcggtattgc ttaactgtga
    11761 ttgcacattt agtaatcact gttttctttt ccaccagaaa ccagtatgag ggaaacgagg
    11821 catgaagaga caaaaacgag atcgcctgga acgggcacat caacgtggtt atcaggccgg
    11881 catcgccgga cgctcaaaag aaatgtgtcc ctatcagacg ctgaatcaaa ggtcacaatg
    11941 gctgggaggc tggcgagaag ccatggcgga cagggtagta atggcctgat tctgtctctt
    12001 taaaaagaaa cctccgcatt gcggaggttt cgccttttga tactctgtct gatgataatc
    12061 agaaggcaga cgtatcctgg aacagaccga ctttcaggtc gctggcggta tagatcagac
    12121 gaccatcaac cagcacttcg ccatctgcca gacccataat cagacgacga ttaacaatgc
    12181 gtttaaagtg aatacggtag gtcacttttt tcgctgtcgg cagtacctga ccagtgaatt
    12241 tcacttcgcc aacgcccagc gcgcggcctt taccttcgcc gcccagccag ccgaggtaga
    12301 accctactag ctgccacatt gcgtccaggc ccaggcatcc cggcataacc ggatcgccaa
    12361 tgaagtggca tccgaagaac cacagatccg gattgatatc cagttctgct tcaacatacc
    12421 ctttgtcgaa gttaccaccc gtttcggtca ttttgaccac acggtccatc atcagcatgt
    12481 tcggtgctgg caattgcggg cctttagcgc caaacagttc accgcgacca gaggcaagaa
    12541 ggtcttcttt tgtataggat tcgcgtttat ctaccatgtt ctctgtaagc cttattttat
    12601 tgaagcacgc aggatagcta acacgtgtac gctgaacaag tccgatcagt tcggaataaa
    12661 ccagttcagc caacgtaatg gccatggaaa acggtgacgt ccttcctgtt gcgatgcttg
    12721 cgcgatacgt tcctggatgg tttgcatcag cgtcgtttgg ccttcgccat cccacaccag
    12781 atttaataat aacggcagtg cgtcagtcac atcgtctact gcccagatgg tgaatttgcc
    12841 ttcttctacc gctttcacca gttcactgtg aagacttaaa tggcgaacgt tagctgtggg
    12901 gataatgaca ccttgtttcc cggttaactc acgttgctgg caaatagcaa agaagccttc
    12961 gattttctca tttaaaccac cgaccggctg ggcgcgaccg aactgatcga ctgaacctgt
    13021 gatagcgata ctctgattca ccggcacatc ggcgagggcg cttatcaggg cgcagagttc
    13081 agccatcgag gcactatctc catcaacttc actgtatgac tgctcaaatg tcagcgatgc
    13141 tgagaagggg atctgttgct caagctgtag ttccgacatc aggaacgctt gcatgatcat
    13201 catccctttc gcatggatat tgccgccaag ttccgctttg cgttcgatgt cggtgaattc
    13261 accatcgcca atatgcacaa cgcagctaat gcgagaaggt tcgccaaaag cgcgtggatg
    13321 acccggaaat tcaatgaccg aaagggcgtt aatttgcccg atgcgttcgc cttcggtttc
    13381 aatcaggatt tgctcctgaa ggatctcatc ctgcatacgt tcagcgagga aaccttcgcg
    13441 ccattcacgc tgctgcagca ttaagtttag ctgctcgccg gagaaggtgt cgccatcaca
    13501 cagggaggcg acctctttac actggcggag gatccactgc gggctaagcg gaagtgtttc
    13561 ttgttcaccg gtgtagcgtg ctgcttcgcg gataagtacc ggccaggcat ccgctcccgg
    13621 ggcaggtaag tgattatgtc tggcggtaaa tgtcacccag cgacaccact ggcttactga
    13681 ctccgcatcg acaatctgca gagtatcttc aaattcgcta taaatagcct gctctgaaag
    13741 ctctggctcc atctcctgga aatcagccaa tgattcgcgt tcgcctacca gaatgacttt
    13801 cagcttcaat ggcatcgaag gcacagagac ggggagaggg cgcgactcat caaacgcaac
    13861 ccagtcaaaa cgctcgcggt taacgatatt tttcagccgc atccacagca gaggttgcgc
    13921 cagcagtgta cgcaaagaga tgatgagaat accgccattt gcctgatgca ccagaccagg
    13981 ctgcagggta atgtcgccat taaactggcg caggcagcca aagagttgct ccgcttctac
    14041 ccagtcggca gcgacaactt gcgttaaagt cgcaaaatta tcatctgcac tcactgcgtg
    14101 acgtaagcgg atggagtggc cggaaacctc atagtgatcg cccaccagtt ggcctgcatc
    14161 gctttgtagc gtacgcgcgg catcggcaat aagattcaga tactcagact cttccggggc
    14221 cttagccagc ataaaagagg aggatgctcg cgtatgcagc aactgctcca gcgcaaattg
    14281 cagccgcggt tgagtatcac tgaataaagg atcgttttcg tcaatcaaat gtggctgagc
    14341 aaatatttcc tgatagctat cggtatcagg aaccaggtca cgccatgcaa gtttcgtaat
    14401 ggtcaaagtt gatgtttttt agtctgttgt caaagccgcg attataccgt aaccggcact
    14461 acagcacacg tagaaagcac cgacaatact cctggcatgg gcgttaaagc tcacaggatg
    14521 gagattcttt tcttcactgg cctaaaaagc tgatattctg taaagagtta cacggtaaca
    14581 ttgagatcgc tatgaaatat caacaacttg aaaatcttga aagcggttgg aaatggaagt
    14641 atctggtgaa gaagcatcgc gaaggggagt taattacccg ttacatagaa gccagtgccg
    14701 cccaggaagc cgtcgatgtg ttgctctcgc tggaaaatga acccgtgctg gtaaatggct
    14761 ggattgacaa gcatatgaat ccggaactgg tcaatcgcat gaagcaaacc attcgggcca
    14821 gacggaagcg ccattttaat gcggaacacc agcatacgcg caaaaagtcg atcgatctgg
    14881 aatttattgt ctggcaacgt ctggctggtc ttgcgcagcg tcgcggtaaa acgctttctg
    14941 aaacgattgt tcagctgatt gaagatgcgg aaaacaaaga gaaatacgcg aataaaatgt
    15001 cttctctgaa gctggatctg caggcattgc tgggtaagga ataactgacg aaagtcagtt
    15061 caatttacta aaggcaaaaa aaaccccgca gcagcggggt ttttctacca gacgataact
    15121 taagcctgcg gctgagttac aacgtctttg atacctttaa cttcgatctc tacgcgacga
    15181 tccggagcca ggcagtcgat cagtgcagca cgctgtttca cgttgtcaca ggtgttgcca
    15241 gtaaccgggt tggattcgcc cataccacgt gcggagatct tgtctgccgg gatacctttg
    15301 gagatcaggt aatcaacaac agactgagca cggcgctcgg acagaccctg gttgtaagcg
    15361 tcagaaccga tgcggtcggt gtaacccaga acaactacgg aaccgtcttt cggatccagg
    15421 ttgctcagct ggctgtacag ctgatccaga gcagcctgac cttccggttt cagggttgct
    15481 ttgttgaagt tgaacagaac gtcagacttc agagtgaagt gcttggtctg tacttccggt
    15541 gccggagctg gagccggagc aactactgga gctgcttcgc cctgaccgaa acggtaggaa
    15601 acacccaagc tcagcatgcc gttgtccgga cgagtgccga tggtgtgtgc gtcaccgatg
    15661 ttgttggtcc actggtattc cagacgggta gcgatttcag gagtgatcgc gtactcaaca
    15721 ccgccagcga agaccggaga aacgccggtg tcgtggtttt taccataaac gttggattta
    15781 gtgtctgcac gccataccat accacccaga cgagtgtaga tgtccaggtc gtcagtgatt
    15841 gggtaaccca gtttagcggt cagttgaacg ccctgagctt tgtatgcacc gttttcaacg
    15901 ctgcctttgt acggcatacg acctaaccag tcgtaaccca tttcaaagcc aacatacggg
    15961 ttaacctggt aaccaccaaa agcaccagcg cccagttggt tttcatgggt cgggccattg
    16021 ttgttgatga aaccagtgtc atggtactgg gaccagccca gtttagcacc agtgtaccag
    16081 gtgttatctt tcggagcggc ctgcgctacg gtagcgaaac cagccagtgc cactgcaatc
    16141 gcgatagctg tctttttcat tttttgcgcc tcgttatcat ccaaaatacg ccatgaatat
    16201 ctccaacgag ataacacggt taaatccttc accgggggat ctgctcaata ttaactctac
    16261 cgatatcttc ggcttatgcc gagcacccct ggcgatgtaa agtctacaac gtagttgaaa
    16321 acttacaagt gtgaactccg tcaggcatat gaaaaaaaag tcttgtataa ggtatgttta
    16381 atcttttttg tcagcgacaa tttacagaag aaaatcgcgg aaaccgcttc agacaagcct
    16441 ccgcaaggaa aattagtcac gactgaaagc attggctggg cgacaaaaaa agttccagga
    16501 ttaatcctaa atttacttaa tgatacaaat tagagtgaat ttttagcccg gaaagttgtc
    16561 tcgtggcgtg agaggatgcg cttaccggac gcataataaa ccccatagcg ttaccttcat
    16621 ttgccgcatc aacaagttca gcatgctctt cttcagtcaa atcatctgcc aaccaaccga
    16681 tcaccacact gtaattgccc gtgcgtaaag cgcgaaccat tgactccaca gtgtggcaag
    16741 gggagagctg gctaatctgc attactttcg ttaagggtag cccagatgcc tgaacccatt
    16801 cccgactcag tttttgttgc ggtgttaacc agagttgcca gcgcgattgc tgaccgagtt
    16861 gctgtaacaa tggcaacagt agaagttgcg tcatcatggg ctgatcttcg cgatagacaa
    16921 cttcactgat aagcccggct gtagtgtttt ccgtagagac acgcgcaatt ttacttgctg
    16981 cggatgagaa cgacgaagaa cgatgtgcat agcctgaagt gtacataatc aatccagccc
    17041 ctgtgagtta ctgtatgaat gtacagtaca tccagtgaca acaaagatca accctatttt
    17101 cggaaagagc ctcgcaaatt ttttcgttgg tgacgggaaa acataaatta atcttgcccc
    17161 ttaagaataa gttgcctatt ttcgtagtta acggatccgt taatgtgaat cattctttta
    17221 tgttatgatt ttaaaaggaa ttttatgaaa agcctctcct ataagcggat ctataaatca
    17281 caagaatacc tggcaatgtt gggcacaatt gaataccgat cattgtttgg cagttacagc
    17341 ctgaccgttg acgacacggt gtttgcgatg gtttctgatg gtgagttgta tcttcgggct
    17401 tgtgagcaaa gtgcacagta ctgtgtaaaa catccgcctg tctggctgac atataaaaag
    17461 tgtggccgat ccgttaccct taattactat cgggttgatg aaagtctatg gcgaaatcaa
    17521 ctgaagctgg tgcgtctgtc gaaatattct ctcgatgcag cgctgaaaga gaaaagcacg
    17581 cgcaataccc gggaaagact gaaagatttg cccaatatgt cttttcatct ggaagcgatt
    17641 ctcggggagg tggggattaa ggatgtacgg gcgttacgta tacttggggc aaaaatgtgt
    17701 tggttgcgac tgcggcagca aaacagtctg gtgacagaaa agattctgtt tatgcttgaa
    17761 ggtgccatta tcggcattca tgaagctgcg ctcccggtgg cacgccgcca ggagcttgca
    17821 gaatgggctg actcacttac gccgaaacag gagtttcctg cggaacttga gtaatctggc
    17881 gttgcagacg accaatctca ggcagtaatg caatcaataa tccaacttgt tgtacgacca
    17941 gaggttcttt gctgtctgcc cgtggttcaa gttgctgcat ccgctgtttc aggctagcta
    18001 atgcctcatt gacgcgttct tcatcagcag gttgatgatg taacgcgtca tcaacatagc
    18061 aaactgcgtc atcaagaaac gccagaattt caggattagt taactgctcc cggtgagcac
    18121 cgagggctga gatatagctg gtaaacgtat ggttaaggca cagcaaccga aacgcggctt
    18181 cgcgaatttg cggggtaacg ttcggctcgc tggacatatt tgataccacc gacgccagct
    18241 cagcatcacg gttgtgtgca tcgcggcggg caatacgata cgccagacgg ttatcacgcc
    18301 cctgatggta ttgctccagt atggcatcga gataccgaca gttggcctct gtggcgcgtt
    18361 cgagcatgcg cggcaaattg cgaaactgcc agtcaggcca gatgtagctc actgccgccc
    18421 acgcaatggc acaaccaatc agcgtatcga ttacgcgagg taacgctact tcaaaacctt
    18481 cacccagtaa gttaaaacac agtagcacca aaagtgtgat gaacatcgtt gcatgagcgt
    18541 attgcacgtt acggaaggca aaaaagagca cgccggtaat aaccagcagc accagctgcc
    18601 cttccagtga tggcacaaac cacagcacag gaatgccaat ggcgatacct accagcgtac
    18661 caataatcct taacttcagg cggtggcgcg tggcgttata gtttggctgg cagacaaaca
    18721 aacttgtcag caagatccaa aacccgtgat gcattccggt tatttgaatg atggcgtagc
    18781 cgaagcacaa caccagcgac attcttaccg catgacggaa gagggcggat tccggcgtga
    18841 agtgacggct aagacgcagc cagatatcac tcaacccgtg cgggctgtca tcagcgagct
    18901 cattttcgtc attattatgg ggtagtgcct gggcctgttc tgattcaatt gttgccagtt
    18961 gggcatcaat ggcgcgtaaa ttgttcagca aaaatcccag tgttttgagt aaatcggcgg
    19021 gtgcgccgtt atcgcgcatc cgctccagcg cagcatcaat atgcgtaaaa gcgcgctcaa
    19081 aatgcggatc atgttgataa ggctgacgca acaaaataca gcgtgacagt tgctggcacg
    19141 cctggccctg catcgacatc agccgctgaa aacggaacag cacgtcgctg tggcgaaaat
    19201 gttcacgcaa tgtttgatac tgaatatgag aagagctggc acgctcgtga atatcctgtg
    19261 cgacaaagta ataatgcagc gtgcgacgcg ttccccgttg accacgatcg ccacgtaagc
    19321 gggtcagcag cgagagtttc gtctgattca atgtcgccat cagcagaccg ttggcgagag
    19381 ccaaatcgta cagcggtgcc tggctttcat cttcaatatc aggatcaaac atgcgcgact
    19441 tgagctcaag ataacgcgcc agttgttcat agcaacgcgc caggttgtcc tgcagcgggc
    19501 ggaccgggaa cagcagatga ccaataagtg tcaggacgtt gtaccagacg gcaccggcca
    19561 gcagatacat cggctgctga taccagtgct catacagtga tgttcccaac atagtgtaaa
    19621 tggcgatcag caatgcaccg aaggcaattg ttgcatagcg ttgacccaga ccgccgagca
    19681 aaatgaagcc gctggtagag agcgttaagc caatcgcaaa tagccagggc cagggaaaca
    19741 gcaattctac tgaggccgag gcgataaaaa agcagaacag cgtaatgatg aggttacgca
    19801 aacgtcccgc cagtcggtca tcgagatcgg tcagcgccgc tgccaccatc cccagcgtta
    19861 gcggaatcgt cagttttaca tcacccagcc accacggaaa cgctgtggtt ccacaaagcg
    19921 caataaaaat acgcgcgtaa tacagccagg cgctgttcca ggtatagcgt ttgagcaaag
    19981 gacttagcat aaaggccata ttagtggatt attcaaaacg acgacgtgca ttggcttcac
    20041 gcgcagcttg cgctgtttct accgatacca cgcgacgacc aaccggccat agtgcaatag
    20101 cggcaatttt aaagttcgca atgccgacag gaatgccaat gattgaaata cattgtgcga
    20161 tgcccgttgc aatgtgcatc aggcataacc accagccaaa gaaaatcagc cagaaaatat
    20221 tcaataccgt accgccagta ttcagcagca catttttgcc agccgggttc agttcatcga
    20281 catgaatagc ttcattgcca taaggcacca gagacagttt agtgatctcc cagcaggatc
    20341 gtgtcagcgg taaggtaaaa atcagcacaa tactgaccag agtcgccaac agccagccca
    20401 gagtggtggc aaatccgcca agcacaaagt tcagaatgtt caaaacggta cgcataaaac
    20461 ctcgctttac tgtggttttc agtaatgggc ggcaattgta acgttttttt gggctggagc
    20521 acgttttctc tgacggttac actgataaga aataatttcg tgtggatcta cagagtcatg
    20581 gaactgaaag cgacaacgct tggaaaacgt ctggcacagc acccttacga tcgggcggtg
    20641 atcctcaatg ccgggattaa agtctccggc gatcgccacg aataccttat tcctttcaat
    20701 caattactgg cgattcactg taagcgtggt ctggtatggg gcgagctgga atttgtactg
    20761 ccggacgaaa aagtggtgcg tctgcacggc accgaatggg gcgagacgca gcgtttttac
    20821 catcatcttg atgctcactg gcggcggtgg agtggcgaga tgagcgaaat tgcgtctggt
    20881 gttttacgcc agcaactgga tttgattgcc acgcgcactg gagaaaataa atggctgacg
    20941 cgtgagcaaa cctctggcgt tcagcaacaa atccgccagg ctttgtcggc gttgccgttg
    21001 ccggttaacc gactggaaga attcgataac tgccgtgagg cgtggcgtaa atgtcaggcc
    21061 tggttgaaag atattgaaag cgctcggttg cagcataacc aggcgtatac cgaagccatg
    21121 cttaccgagt atgcggattt tttccgccag gtcgagtctt caccgctgaa tccggcgcag
    21181 gcccgggcag tcgttaatgg cgagcattct ctgttagtgc tggcaggtgc aggaagcgga
    21241 aaaacgtcgg tgctggtggc ccgtgcaggc tggttgctgg cacgtggtga agcgtcccct
    21301 gagcaaattt tattgctggc gtttggtcgc aaagccgctg aagagatgga cgagcggatt
    21361 cgcgaacggc tacataccga agacattacc gcacgcacgt ttcatgcgct ggcgctgcat
    21421 attattcagc agggcagcaa aaaagttccg atagtcagca aactggaaaa tgataccgct
    21481 gcccgtcatg aactctttat tgctgagtgg cgcaagcaat gcagcgaaaa gaaagcgcag
    21541 gcgaagggct ggcggcaatg gctgacggaa gaaatgcagt ggtcagtgcc agaaggtaac
    21601 ttctgggatg atgaaaaatt acagcgtcgc cttgcctctc gcctcgatcg ctgggtaagt
    21661 ctgatgcgga tgcacggtgg tgcacaggca gaaatgattg ccagtgcacc cgaagagatt
    21721 cgcgatctgt tcagtaaacg tatcaagttg atggccccgt tattaaaagc ctggaaaggt
    21781 gcgctgaagg cagaaaacgc tgtcgatttt tcgggcctta ttcatcaggc gattgtgatt
    21841 ctggagaaag gtcgctttat cagcccgtgg aagcatattc tggttgatga atttcaggat
    21901 atctcgccgc agcgggcagc gttgttagcg gcattacgca agcaaaacag tcagacgacg
    21961 ttgttcgctg ttggtgatga ctggcaggcg atttaccgat tcagcggtgc gcaaatgtcg
    22021 ctcaccaccg ctttccatga aaactttggt gaaggcgaac gttgtgattt agacacgact
    22081 taccgtttta acagtcgtat cggtaaggtg gcaaaccgtt ttattcagca gaacccaggc
    22141 cagctgaaaa agccgctaaa cagcttaacc aatggagaca aaaaagccgt cacgttattg
    22201 gatgagagtc aacttgacgc tttgctggat aagctctctg gttatgccaa accggaagag
    22261 cgcattctga tcctggcgcg ttaccatcac atgaggcctg ccagcctgga aaaagcggca
    22321 acacgctggc cgaagttgca aatcgacttt atgaccattc atgccagcaa agggcaacag
    22381 gcggattacg tcatcatcgt tggcttgcag gagggaagtg atggttttcc ggctgcggcg
    22441 cgggagtcga ttatggaaga ggcgctactg ccaccggttg aggatttccc ggacgctgaa
    22501 gaacggcggt taatgtacgt ggcgctgacc cgggcacgcc atcgggtatg ggcactgttt
    22561 aacaaagaga atccctctcc ctttgttgaa atactgaaaa atctggatgt gccggtggcg
    22621 agaaaaccgt aagaaacagg tggcgtttgc cacctgtgca atattacttc agacggtccg
    22681 cgagataacg ctgataatcg gggatcagaa tatcgaccgc gtcgttgaaa tgcggcgact
    22741 ggattatgaa gtctgccgtt gccacgttgg tggcgaccgg aatgttccat accgtcgcca
    22801 gacgcagcaa ggctttcacg tcaggatcgt gcggcacggc atttagtgga tcccagaaga
    22861 aaatcaatac atcaattttc ccttctgaga tcaatgcgcc aacctgctgg tcacccccca
    22921 ttgggccact caacatcgcg ttgacgttca tgccggtcgc gcgggaaatt aagttaccgg
    22981 tagtgcctgt tgcatacagt acgtgttgtt ccagtaacgg ttgatgccgt tccacccagc
    23041 tcatcagcat ttgtttgcag tgatcgtgtg ccaccagcgc aatatgtttc cgcgcaggta
    23101 aagtgcgagt cgtcagttcc ataatgtaca tccgtagtca actttcctac agattactgt
    23161 aagcacttat cgctgcaaga taaagaccga aaaagcctgc gcacaggcac aaaaatctca
    23221 ggaagatggt tgtttttccg cccactgcag gaaagtattt cgcgtttgtg ggtcagccag
    23281 tttaaaccaa tacttcagcc gttgttctgt gagcacctga gactgcggtg gaatagcatc
    23341 cagctcggaa acacccgaaa gcagcgtact gtcatctgcc atcatcgtgg caaattgcgg
    23401 tagtgaagcg cgtttcgcgg atttgttata gcgttcaacc tcgacctcat aatcaatcgt
    23461 ttttgccgtt gaggtaatgg cgagaatatc cagctttacc ggaatcggcg tcgcatcgcc
    23521 atccaacaat tcaaggcgcg gcgcggcatc aaaatggtta gcttcccgct cattctccag
    23581 gcgaggcagg cgaaaattga cctggttgat gagctgggta ttaaaactga ccactagcgg
    23641 tggggagata tacagccgtt cttcactatt ggaaagatga atcgtcttct caacgcgaaa
    23701 cactaactga tgcggtccat tatccagttc aatgctgtcc gcaccgcgca gcagagagct
    23761 ggaaaccttc ttgccgtcga gtaccagaag atcgacatcg gttgaaagcc gcagcgtggt
    23821 ggcaaaaacg gataccggca aacataatgc aatcaaggtg gtcacgatgc cggttttcat
    23881 aggtagctcc tgtcaaaaga ccgcccgaat aataatgtgt caaaattttt ctttaatcat
    23941 acttactaac atatagacat atttcccgct tttgctctca ttcattcgta ttagctgcat
    24001 ggttggcatg tcggctttgt cgtacacttt gttaaacagt ctggaggaaa taatgaaaga
    24061 aaccgatatt gcaggcattt taacgtccac tcacaccatt gcgctggtgg gggcaagcga
    24121 caaacccgat cgtcccagct atcgcgtgat gaaatatcta ctcgaccagg ggtatcatgt
    24181 cattccggtt tcgccaaaag ttgccggcaa aacgctgctg ggccagcagg ggtatggcac
    24241 gctggcagac gttccggaaa aggtcgatat ggtcgatgtt ttccgtaatt cagaagcggc
    24301 gtggggcgtg gcacaggaag ctattgccat tggcgcgaaa accctctgga tgcaactggg
    24361 ggtgattaat gagcaagcgg cagtactggc acgggatgcc gggttgaatg tggtgatgga
    24421 tcgctgcccg gctattgaga tccctcgcct gggcctggcc aaataaaaaa tccccggaag
    24481 gcaaaaacct tccggggatt cgttcaggga tcagttacgc agacgcgggg cctggagttg
    24541 tttgcggatg gtctgcgcca gctcatccat ggatggctgt tcaggatgtt catcctgcaa
    24601 ttcgctactt agctgggctt cagccaggta ggtatgaacc ggtaggccgt tatcgtcctc
    24661 catcactacg tgataccacg gagcggcgcg aagctcgtca tttaccgcca gctcatcagg
    24721 cgacggttca gagagcgaat aaaccgggtc gatatccacg accactccga gataacctaa
    24781 cagggaatgg cggacctgct ggccgatacc gaatttgctg gcaatcatag tcacctcccg
    24841 ggaaatcttt acctttgata taagggtaaa attccacatt tcaagttaca tgacgcgaca
    24901 ggcaaaccct ttcagatata gcccttccgg ataggtagcg atcaccggat gatcggctgc
    24961 ctgacggaac tgctctataa attgtacatc acggccggca tcaattgcgg catccgcgat
    25021 gattttctga aataaatcgc tggtcatcag accggaacag gagaaagtca ggagaatacc
    25081 gccttcattc agcaactgaa tcgccagcat gttgatatct ttatagccac gacacgcgcc
    25141 catcaactgg cttttattct caacaaactt cggcgggtcc atcacgataa cgtcaaattt
    25201 ttcaccgcga tcgcgataag tacgcagcaa tttaaagaca tcatcacgga caaactcagc
    25261 cttgctcaga tccagtttgt tcagctcaac gttctgccgt gcaatatcca gcgcttcctg
    25321 ggaggtatca acgctgacaa cctggctgca accgcccatc agtgccgata cggcgaaacc
    25381 accggtatag gagaaacagt tcagcacacg tttattttca acgtagcggc gggtagccag
    25441 gcggctgtct cgctggtcca ggtagtagcc cgttttgtgt ccgtgctgaa tatccaccag
    25501 cagcttcatg ccgtgttctt caatcggcag cagggcaggc ggcaactcgc cggtgacgag
    25561 gcccagggtc agctccatcc cttctttttt acgtaccgca acatcgctgc gatcgtaaat
    25621 cgcacattcc gggtacagcg tttgcagggc actaactaat gccgcgcgct gatattctgc
    25681 cccagcactc agcagttgca gcaccagaaa attaccgaaa cgatcgatag taatacccgg
    25741 caggccatca gattctccgg cgattaaacg atagctgtcg aggccatctt tttgcgccag
    25801 ccagtcacgc catttttgtg cttgttgcaa acggcgggaa aaaaaagcaa tgtcgataga
    25861 ctcagacggg tcaaacgtcc agacgcgcgc ccggatttgc gaagctggcg aataagcgcc
    25921 gcgtgctaac cattttccct gatgatcaac aatatcgatg gtttcaccga ggctggcttt
    25981 accttccatg cgggcaacgg ccccggaaaa gacccacgga tggcgacgaa gtaatgattt
    26041 ttcgcgccct ttggctaaca ctaaacgtac actcataatt tacttttctg tcgatgcaaa
    26101 gaaatgggcg tcattgtccg gagttttcca tggatttgca acgcgtccat taaggataag
    26161 gagagcagca atgtcgaaag tctgcataat tgcctgggtt tacgggcgag ttcagggcgt
    26221 aggatttcgc tacaccacac agtacgaagc gaaaagactg ggtttaaccg ggtacgccaa
    26281 aaatcttgac gatggcagcg tggaagtggt tgcctgcggt gaagaagggc aggtggaaaa
    26341 attaatgcag tggttaaaga gtggcggccc gcgttctgcg cgtgtagaac gggtgctcag
    26401 cgagccgcat catccctcgg gggaattaac cgattttcgt atccgttaaa tacattttac
    26461 cggttttggc aggccagcaa ttttggtggc ttgcttagcc ggacctttcg gaaacagtcg
    26521 gtataaatag cggctgttac ctttttcttc gccaaattta ttcgccatcg cttttaccag
    26581 catacgaatc gccggagaag tattgaattc cagatagaaa tcacgcacaa aacgcaccac
    26641 ttcccagtgt tccggtgaca gcgaaatccc ttcgttctct gcaatcacca ctgccagcgg
    26701 ctcactccac tggctgcttt ctttgagata gccttcggta tccgtttcta tctctttacc
    26761 ttcgaagatc agcataatta ttactacctt aatcagactg gcggcagtgt aacaaaaaac
    26821 aaagccccgc ataaagcgag gctatgaaag tgttagcggg tgagattaat cgcggctggc
    26881 gaagcccaga atgctcagca ggctgacgaa gatgttgtac agcgaaacat acaggctaac
    26941 cgtggcacga atatagttcg tttcaccgcc atgaacgatg ttgctggttt caaacaaaat
    27001 agcgccagag gagatcaaaa tgaagaccgc actgatcgcc agatgcagag caggcagctg
    27061 caggaagata ttagcaacca taccaatcag caccaccaca atacccgcca tcagcatacc
    27121 gccgaggaac gacatatctt tgcgggtggt cagcacatat gcagagcagc agaagaacac
    27181 taacgccgtt ccgcccagag ccatagcgat tacgtccccc attccggcag acagataggt
    27241 gttcagaata ggtccgagga tataacccag aaaaccggta aaggcgaatg cggagataat
    27301 cccggtcggc ttattcgccg ttttataggt caggaacatc aaaccataca tacccaccag
    27361 cgtcagaatc agacccggag atggcagcat cagcaccgta ctggcagttg cggtaatcgc
    27421 cgaaaaggcc agcgtcaggc tcagcagaaa ataggtatta cgcagcacct tatgggtgct
    27481 aagcagtgat gtacggtcat gtgaagaact aacaatacga tccattgagt cactctctat
    27541 gacagatgta attaattaag cagcataatg ataatgcgta agggcaccca gaagttttac
    27601 ccatctttac gcatttgatc tggaacaggt ttaacagcgg attatcaggt cattaagcaa
    27661 atataacgcc ctgagaattt cgacaggcaa aagaaaaagg ggttagcatt tagctaaccc
    27721 cttatcttat ttggcggaag cgcagagatt cgaactctgg aaccctttcg ggtcgccggt
    27781 tttcaagacc ggtgccttca accgctcggc cacacttccg gaatgacgcg cactataaac
    27841 atcccgatgc ggcgtgtaaa cccctaattt gtttgtttgc ctgaaaaaca gccaaaagtg
    27901 cattgatagc gtgaaataac agcagattga tcatttcatc accatgaatt ccttctcttt
    27961 tactcgttta gcaaccggct aaacatcccc accgcccggc aaaaagaaaa ataggtccat
    28021 ttttatcgct aaaagataaa tccacacagt ttgtattgtt ttgtgcaaaa gtttcactac
    28081 gctttattaa caatactttc tggcgacgtg cgccagtgca gaaggatgag ctttcgtttt
    28141 cagcatctca cgtgaagcga tggtttgcct tgctacaggg acgtcgcttg ccgaccataa
    28201 gcgcccggtg tcctgccggt gtcgcaagga gaagagacgt gcgatatgaa taacgaggaa
    28261 acattttacc aggccatgcg gcgtcagggc gttacccggc gcagctttct caaatattgt
    28321 agtctggctg ccacgtcgct gggattaggc gcgggaatgg caccaaagat tgcctgggcg
    28381 ctggagaaca aaccccgcat tccggtggta tggatccacg gtctggaatg cacctgctgt
    28441 accgaatctt ttatccgctc cgctcaccca ctggcgaagg acgtcatcct ttccctgatt
    28501 tccctcgatt atgacgatac tttgatggct gccgccggaa cccaggcgga agaagtcttc
    28561 gaagacatca tcacgcaata caatggcaaa tatatcctcg cagtagaagg taatccgccg
    28621 ctgggcgagc aggggatgtt ctgtatcagc agcggtcgac cgtttattga gaaactcaaa
    28681 cgtgccgctg ccggagccag cgcgattatc gcctggggaa cctgcgcgtc ctggggctgc
    28741 gtgcaggccg cgcggcccaa tccgacgcag gcaacgccta tcgacaaagt catcaccgac
    28801 aaacccatta tcaaagtacc tggctgcccg ccgatcccgg atgtgatgag cgccatcatt
    28861 acttacatgg tgacctttga tcgcttgcca gatgtcgaca gaatgggccg tccgctgatg
    28921 ttctatggtc agcgaatcca cgataaatgc tatcgccgcg cccacttcga cgccggagag
    28981 ttcgtccaga gttgggatga tgacgctgcc cgcaaaggtt actgcctgta caaaatgggc
    29041 tgcaaagggc ctaccaccta taacgcctgt tcctccacac gctggaatga tggcgtttct
    29101 ttcccaatcc agtctggtca cggctgcctg ggctgtgcgg aaaatggttt ctgggatcgc
    29161 ggttcgttct acagccgcgt ggtcgatatt ccgcaaatgg gtactcattc caccgccgat
    29221 accgtcggtt taaccgcgct tggcgtggtg gcagcggctg ttggtgtgca cgcagtcgcc
    29281 agcgccgttg accagcgcag acgtcataac cagcaaccta cagaaaccga acatcagcca
    29341 ggcaatgagg ataaacaggc atgagcactc agtacgaaac tcagggatac accatcaata
    29401 atgccggacg ccgcctggtg gtcgacccga ttacgcgcat cgaaggccac atgcgctgcg
    29461 aagtgaatat taacgatcag aatgtgatca ccaatgccgt ctcctgcggc accatgtttc
    29521 gcgggctgga gatcatccta caagggcgcg acccgcgcga tgcgtgggcg ttcgttgaac
    29581 gtatctgcgg cgtctgtact ggcgtacacg ccctggcttc ggtttacgcc atcgaagatg
    29641 ctatcggtat taaagtgccg gacaacgcca atatcatccg caacattatg ctggcaacgc
    29701 tctggtgcca cgatcatctg gtgcacttct atcagcttgc cgggatggac tggatcgatg
    29761 tgttagatgc gctgaaagcc gacccgcgga aaacctccga actggcgcaa agtctctcct
    29821 cttggccgaa atcatcccct ggctatttct tcgacgtaca aaaccgcctg aaaaaatttg
    29881 ttgaaggcgg gcagttgggg atcttccgca atggctactg ggggcacccg cagtacaaac
    29941 tgccgccaga agctaacctg atgggctttg cccactatct cgaagctctc gatttccagc
    30001 gtgaaattgt caaaatccac gcggtctttg gcggtaaaaa cccgcatcca aactggattg
    30061 tcggcgggat gccttgcgcc atcaacattg acgaaagcgg cgcggtcggg gcagtcaata
    30121 tggaacgcct gaacctggtg cagtcaatta tcacccgcac ggcggacttc attaacaacg
    30181 tgatgatccc cgacgcctta gccatcggtc agttcaacaa accgtggagc gaaatcggca
    30241 ctggtctttc tgataaatgc gttctcagct acggcgcatt cccggatatt gccaacgact
    30301 ttggcgagaa aagtctgctg atgcctggcg gcgcggtgat taacggcgac ttcaacaatg
    30361 tgctgccagt ggatttggtt gatccgcagc aggtgcagga gtttgtcgac cacgcctggt
    30421 atcgatatcc caacgatcag gtcgggcgtc atccgttcga tggcatcacc gacccgtggt
    30481 acaaccccgg cgatgtcaaa ggcagcgata ccaacattca gcagctgaat gaacaggaac
    30541 gctactcgtg gatcaaagcg ccacgctggc gcggtaacgc gatggaagtg gggccgctgg
    30601 cgcgcacgtt aatcgcttat cacaaaggcg atgctgcgac cgttgagtcg gtcgatcgca
    30661 tgatgtcggc gttgaacctg ccgctttccg gtatccagtc aacgttaggc cgcattttgt
    30721 gccgcgcgca cgaagcgcag tgggccgcag gtaagttgca gtatttcttc gacaagctga
    30781 tgaccaacct gaaaaacggc aatctcgcca ctgcttccac ggaaaaatgg gaacctgcaa
    30841 cctagccgac agagtgccgt ggtgtcggtt ttaccgaagc gccgcgcggg gcgttaggcc
    30901 actgggccgc cattcgcgat ggcaagattg atctctacca gtgcgtggtg ccgaccacct
    30961 ggaacgccag cccgcgcgat cccaaagggc agattggcgc ttatgaagcg gcgctgatga
    31021 acaccaaaat ggcgatcccc gagcaaccgc tggagatcct gcgtactctg cacagctttg
    31081 acccgtgcct cgcctgttca acacacgtgc tgggcgacga cggtagcgag ctgatctccg
    31141 tgcaggtgcg ttaacagcga aggagaatca tcatgcaaca gaaaagcgac aacgttgtca
    31201 gccactatgt ctttgaagcg ccagtccgca tctggcactg gttgacggtg ttatgcatgg
    31261 cggtgttgat ggtcaccgga tactttatcg gcaagccgct accttccgtc agcggcgagg
    31321 cgacgtatct gttctatatg ggctacatca ggttaattca cttcagcgcc gggatggttt
    31381 ttaccgtggt tttgctgatg cggatctact gggcttttgt tggcaatcga tactcccgcg
    31441 agctgtttat cgtgccggta tggcgtaaaa gctggtggca gggcgtgtgg tatgaaatcc
    31501 gctggtatct gtttctggca aaacgtccga gtgccgatat aggccataat cccatcgccc
    31561 aggcggcgat gttcggctat ttcctgatgt cggtctttat gatcatcact ggttttgcgc
    31621 tgtacagcga acacagccag tacgctattt ttgcgccgtt ccgttatgtg gtggaatttt
    31681 tctactggac gggtggcaac tcaatggaca ttcacagctg gcatcggctg gggatgtggc
    31741 tgattggcgc gtttgtgatc ggtcatgtct acatggcgct gcgtgaagac atcatgtccg
    31801 acggcacggt gatctccacc atggtcaacg gctaccgtag ccacaaattt ggcaaaataa
    31861 gtaacaagga gtgttcatga gcgagcaacg cgtggtggtc atggggctgg gcaacctgct
    31921 gtgggccgat gaaggcttcg gcgtgcgggt ggcggaacgg ctgtatgccc attaccactg
    31981 gcccgagtat gtggagattg tcgatggcgg tactcaggga ctgaacttgc tggggtatgt
    32041 cgaaagcgcc agccatctgt tgattctcga tgccattgac tacgggctgg aacctggaac
    32101 gctgcgaacc tatgccggag aacgcattcc ggcttatctc agcgcgaaga aaatgagcct
    32161 gcatcagaac agtttctccg aagtgctggc gctggcagat atccgcggac atctgccagc
    32221 acatattgcc ctcgtcgggc tgcaacccgc gatgctcgac gactacggcg gcagcctgag
    32281 cgaactggca cgggagcaac tgctcgctgc ggaacaatcg gcgctggcgc agttggctgc
    32341 gtggggaagt gtgccgcaac tggctaatga atcgcgttgt ctcaattatg actgtctgtc
    32401 gatggaaaat tacgaaggcg ttcgcttgcg ccagtaccgg atgacacagg aggagcaggg
    32461 atgagcaacg acacgccatt tgatgcgttg tggcaacgaa tgctggcgcg cggctggacg
    32521 ccggtcagtg aatcccgtct tgacgactgg cttacgcaag cgccagacgg cgtggtgtta
    32581 ttaagcagtg acccgaaacg cacgccagag gtcagcgata atccggtaat gattggcgaa
    32641 ttactgcacg agtttcccga ctatacatgg caggtggcga ttgctgacct tgagcagagc
    32701 gaagccatcg gcgatcgctt tggcgtcttt cgctttccta ccactttagt gtttaccggc
    32761 ggaaactatc gcggcgtgct gaatggtatt cacccgtggg cggaactgat aaacctgatg
    32821 cgcgggcttg tcgaaccgca gcaggagcgt gcctcatgag cgaaactttt ttccatctgc
    32881 tggggccagg aacgcaaccg aacgatgaca gtttcagcat gaatccactg ccgatcacct
    32941 gtcaggtgaa tgatgaaccg agtatggcgg ccctggagca atgtgctcac agcccgcagg
    33001 tgattgcgct gttaaacgag ttacaacatc aactaagcga acgccagccg ccgttgggcg
    33061 aggtgctggc agtcgatctg ttaaatctca acgccgacga tcgtcacttt atcaatacgc
    33121 ttctcgggga aggggaagtg tcagtgcgca ttcagcaggc tgacgacagt aaaagtgaaa
    33181 tacaggaggc gatcttctgc ggattatggc gggtgcgcag acgtcgcggc gaaaagttgc
    33241 tggaggacaa actggaggct ggctgcgcgc cgctggcgtt gtggcaggcg gcaacgcaaa
    33301 atctcttgcc gacagattcg ctgttaccgc cgcccattga tggcctgatg aatggcctac
    33361 cgttggcgca tgagttactg gcacatgtac gtaaccccga cgcgcagccg cacagcatta
    33421 atctgacgca attacccatc agcgaggctg atcggctttt tctctcacgt ctctgtgggc
    33481 cgggaaatat tcagattcgt accattggct atggcgagag ctatatcaac gccacggggt
    33541 tacgccatgt ctggcattta cgctgtacgg acaccttaaa aggcccgtta ctggaaagtt
    33601 atgaaatctg cccaataccg gaagtggtgc tggcagcgcc agaagatttg gtcgactctg
    33661 cgcagcggct tagcgaggta tgtcagtggc tggcggaagc tgcaccgacg taaaaagacg
    33721 gtaagtatcg ctttcagtct tatgaatatc gcaatcggcg aatacctctg gtcgtagagt
    33781 ttcaggataa agagggagat ctaacattat cgggttattt ttctctcttc gcctacagga
    33841 gtgcgcatgt gggatgtcat tgatttatcg cgctggcagt ttgctctgac cgcgctgtat
    33901 cactttttat ttgtacccct taccctgggg ctgatttttt tgctggctat catggaaacc
    33961 atttacgtgg tcaccggcaa aacaatctac cgcgatatga cgcgcttctg gggtaagctc
    34021 ttcggtatca attttgctct tggcgtggct accggcctga ccatggagtt tcagtttggt
    34081 actaactggg cattctattc caactatgtg ggcgatattt ttggcgcacc gctggcgatg
    34141 gaagcattaa tggccttctt cctcgaatcc acctttgtcg ggcttttctt cttcggctgg
    34201 cagcggctga ataaatacca gcacctgctg gtgacgtggc tggtggcgtt cggttcaaat
    34261 ctctctgcat tgtggatatt gaatgccaac ggttggatgc aatacccgac cggtgcgcat
    34321 tttgatatcg acaccctacg tatggagatg accagcttca gcgagctggt ctttaacccg
    34381 gtcagccagg tgaaatttgt gcacaccgta atggcgggct acgtgaccgg ggccatgttt
    34441 attatggcga tcagcgcctg gtatttactg cgcggacggg agcgcgatgt tgcattacgc
    34501 tcgtttgcca tcggttccgt cttcggtact ctggcgatta tcggcacgct acaactcggg
    34561 gacagttctg cgtatgaagt cgcgcaagta caaccggtaa aactggcggc gatggaaggg
    34621 gagtggcaaa cggaacctgc tcctgcaccg ttccatgtgg ttgcctggcc ggaacaggat
    34681 caagagcgta acgcctttgc catcaaaatt cccgcgctgt tagggatcct cgccactcac
    34741 tcattagata aacccgtgcc gggtctgaag aatttgatgg ctgaaaccta cccacgcttg
    34801 caacgcggac gtatggcctg gctgttaatg caggaaatat cgcaaggcaa tcgtgagccg
    34861 catgtgttgc aggcattccg ggaactggaa ggtgacctgg gctacggcat gttgctctcc
    34921 cgctatgcgc cggatatgaa tcatgtcaca gccgcacagt accaggcggc gatgcgtggc
    34981 gcgatacctc aggttgcgcc ggtattctgg agtttccgca tcatggtggg ctgtggttcc
    35041 ctgctgctac tggtgatgct gattgcgctt gtccagacgc tgcgtggcaa aatcgaccag
    35101 catcgctggg tgctgaaaat ggcgctctgg agtttgccgt tgccgtggat tgcgattgaa
    35161 gccgggtggt ttatgaccga gtttggtcgt cagccgtggg cgatacagga catcttaccg
    35221 acatactccg cgcactccgc tttaaccaca ggacaactgg ctttctcact gatcatgatc
    35281 gtagggcttt acaccctgtt cttaatcgcc gaagtctacc tgatgcagaa atatgcccgt
    35341 ctggggccga gcgcgatgca gagtgaacaa ccgacgcagc aacaggggta aagaagaaaa
    35401 tcatgtttga ttatgaaaca ttgcgcttca tctggtggct gctgattggc gtgatcctgg
    35461 tggtctttat gatctccgac ggatttgaca tggggatcgg ctgtctgctg ccgctggtgg
    35521 cgcgtaatga tgatgaacgc cggatagtga taaacagcgt tggtgcacac tgggaaggca
    35581 accaggtctg gttgatcctc gctggtgggg cattatttgc cgcctggccc agagtgtatg
    35641 cagcggcgtt ttccggcttt tatgtggcga tgatcctggt gctgtgctca ctgttcttcc
    35701 gcccgctggc ctttgattat cgcggaaaaa tcgccgatgc acgctggcgt aaaatgtggg
    35761 acgccggtct ggtcatcggc agtctggtgc cgccggtagt cttcggtatc gccttcggca
    35821 acttgttgct cggcgtgccg tttgccttca caccgcaatt acgcgtggag tatctcggca
    35881 gcttctggca actgctgacg ccattccctt tattgtgcgg attgctcagc cttgggatgg
    35941 taattttgca aggtggcgtc tggttacaac tgaaaactgt tggtgtgatt catctgagtt
    36001 cacagctggc caccaaacgc gctgcactgt tggtgatgct gtgctttttg ctggcgggtt
    36061 actggctgtg ggtcggtatt gatggctttg tactgctcgc ccaggatgct aacggtcctt
    36121 ccaatccgtt aatgaaactg gtggcagtgc tacctggtgc ctggatgaat aatttcgtcg
    36181 aatcgcccgt tttgtggatc ttcccgctgc tggggttctt ctgcccattg ctgacggtga
    36241 tggcgattta tcgtggtcgc ccaggttggg gatttttaat ggcgtcattg atgcaatttg
    36301 gcgtgatttt cacggcaggc atcacgctgt tccccttcgt catgccgtca agcgtgagtc
    36361 cgatctccag cctgacgttg tgggacagca cttccagcca gctgacgctg agcattatgt
    36421 tggtaatcgt gctgatattt ttgcccattg tgttgctcta cactctctgg agctactaca
    36481 aaatgtgggg gcgcatgaca acagaaactc tccgccgtaa cgaaaacgag ttgtactaag
    36541 gagcaggaac aatgtggtat ttactttggt tcgtcggcat tttgttgatg tgttcgctct
    36601 ccacccttgt gttggtatgg ctggacccgc gtctgaaaag ttaacgaacg taggcctgat
    36661 gcggcgcatt aacatcgcat caggcaatca ataatgtcag atatgaaaag cggaaacata
    36721 tcgatgaaag cgatcttaat cccattttta tctcttctga ttccgttaac ctcgcaatct
    36781 gcattcgctc agagtgagcc ggagctgaag ctggaaagtg tggtgattgt cagtcgtcat
    36841 ggtgtgcgtg ctccaaccaa ggccacgcaa ctgatgcagg atgtcacccc agacgcatgg
    36901 ccaacctggc cggtaaaact gggttggctg acaccgcgcg gtggtgagct aatcgcctat
    36961 ttcggacatt accaacgcca gcgtctggtg gccgacggat tgctggcaaa aaagggctgt
    37021 ccgcagcctg gtcaggtcgc gattattgct gatgtcgacg agcgtacccg taaaacaggc
    37081 gaagccttcg ccgccgggct ggcacctgac tgtgcaataa ccgtacatac ccaggcagat
    37141 acgtccagtc ccgatccgtt atttaatcct ctaaaaactg gcgtttgcca actggataat
    37201 gcgaacgtga ctgacgcgat cctcagcagg gcaggagggt caattgctga ctttaccggg
    37261 catcggcaaa cggcgtttcg cgaactggaa cgggtgctta attttccgca atcaaacttg
    37321 tgccttaaac gtgagaaaca ggacgaaagc tgttcattaa cgcaggcatt accatcggaa
    37381 ctcaaggtga gcgccgacaa tgtctcatta accggtgcgg taagcctcgc atcaatgctg
    37441 acggagatat ttctcctgca acaagcacag ggaatgccag agccggggtg gggaaggatc
    37501 accgattcac accagtggaa caccttgcta agtttgcata acgcgcaatt ttatttgcta
    37561 caacgcacgc cagaggttgc ccgcagccgc gccaccccgt tattggattt gatcatggca
    37621 gcgttgacgc cccatccacc gcaaaaacag gcgtatggtg tgacattacc cacttcagta
    37681 ctgtttattg ccggacacga tactaatctg gcaaatctcg gcggcgcact ggagctcaac
    37741 tggacgcttc ccggtcagcc ggataacacg ccgccaggtg gtgaactggt gtttgaacgc
    37801 tggcgtcggc taagcgataa cagccagtgg attcaggttt cgctggtctt ccagacttta
    37861 cagcagatgc gtgataaaac gccgctgtca ttaaatacgc cgcccggaga ggtgaaactg
    37921 accctggcag gatgtgaaga gcgaaatgcg cagggcatgt gttcgttggc aggttttacg
    37981 caaatcgtga atgaagcacg cataccggcg tgcagtttgt aatgcataaa aaagagcatt
    38041 cagttacctg aatgctctga ggctgatgac aaacgaagaa ctgtctaatg cgtagaccgg
    38101 aaaaggcgtt cacgccgcat ccggccactt tcagttttac tctttctcgg agtaactata
    38161 accgtaatag ttatagccgt aactgtaagc ggtgctggcg cgtttaatca caccattgag
    38221 gatagcgcct ttaatattga cgcctgcctg ttccagacgc tgcattgaca aactcacctc
    38281 tttggcggtg ttcaagccaa aacgcgcaac cagcaggctg gtgccaacag aacgccccac
    38341 gaccgcggca tcactcaccg ccagcatcgg cggcgtatcg acaatcacca gatcgtaatg
    38401 gtcgttcgcc cattccagta attgacgcat ccgatcgcgc atcagcagtt cagacgggtt
    38461 aggtggcacc tgaccgcgag taatcacatc aaagcctcct ttgccaaaat gctggatcac
    38521 tttgttgagc tcatctttac ctgccagata ttccgacaag ccatgttcat tactcacggt
    38581 aaacaggtta tgcgaataac cacggcgtaa gtcggcatca ataaataaca ctttttgatc
    38641 ggactgggcg atcaccgctg ccagagttga actgacaaac gttttaccac tgtctggcgt
    38701 cgcaccggtg atcatcagaa tgttattctc cgtctccatc atagcgaagt gcagactggt
    38761 tcgtagcgca cgtacggctt ccacagcaga atccgccggg ttatccaccg ccaggaaggg
    38821 gatattttta gtacgatggc gctgctgatt agaaaataaa tttttcttac gcagacgggt
    38881 acgtttatcc agccactcgg acattgggat agtggcataa acgctgatgc cgtgctcttc
    38941 cagttgttcc ggggcttcta caccacgacg caacatcgca cgcgccagca cggcacccac
    39001 cgaaataaac aggccaagaa taaaaccaag caccacgttc aacgcttttt tcggtttcac
    39061 tggctgcggc tgagtgactg ctgggtcgat aatccgcacg ttaccaatgg cactggattt
    39121 cgaaatactc aactcctgct ggcggttaag taattgcaga tataccgcac ggcccgcttc
    39181 tacgtcacgg cttaaacgta acacttcctg ttgagtggaa ggcattgccg atacccgctt
    39241 attcaggcgt ttgcgttctt gctccagcgt ctggcgtttt tccagcagcg cacgataagt
    39301 tgggtgatct ttcttataca gctgggagat ctctgcctcg cggaaagtca gctcattgag
    39361 ttgattatca acgttcacaa tctgctcaag aacggctttg gcttctaggt taaggtcaac
    39421 cgaatcgcgc tgctggcgat aaacgttgag tttttcttcc gcctggtcca gctcgctgcg
    39481 cacttcaggc aactggcgct gtaagaattc aaggctttgt gaatcctgcg ccgcctggcg
    39541 agcgatattc tgttgcaaat agttgttagc gatgctgttc agaatacgag taatcaactg
    39601 gggatcatca ccagtcatgg taagttccag catcccgctt tctttactgc gttcgctaac
    39661 ggtaaaggtt tcctgcaatg cgttaatcgc ttccagttcg gtacgctggc tcaggacaaa
    39721 ctgtgttcct ggtttggcct taatgtccgc gatagtcagc gcaacgccat ctttttccag
    39781 acgctggccg accataccat tgacggtgaa ctcttcacct tccagtgtat agtggccgtt
    39841 ttccccaacc gtgagtgtca gttgctgatc ctgaccattc agttgtggaa tatgcatcca
    39901 gctgatcgcc agctcacctg gtttttcttt ggttaatctc gcccagccgc gacccacaat
    39961 cggaaaatac ttctgctcaa ctatgtcgcg cagattcagt tcagcaatgg ttttaccgag
    40021 aatcatgcgc gattgcagca gttggatctc cggtgcagac tcgggcgatg agttagggat
    40081 catatcgctc aggccgctga gaatggcgtt gccctgtttt tgctcaacct ggaccagagt
    40141 atctgcctga taaattggtg tgcttaacag cgagtaagcg acagcgatca gcgtgaataa
    40201 cgcggttacg ctgataataa acttacggtg atcccataac tcgccgacca gacgaagcag
    40261 atcgatctca ttttcctgag tgctgcctgg tggcgtattc atatttttag ttgtcatcgt
    40321 attttataaa ctcaaattac cggctgaggc gcttcgccca ttcctgactg gcgcgctcca
    40381 acataccgta gacatgttca aatgcgtcct gacttttacg atagggatcc gggatctctt
    40441 tctgttccag ccattgccca aacagcattg tcttcccgcg gacctcggga gcgattgcgg
    40501 taacctgagc aatatgctct gactccattg ccagaatcag atcgtaattt cgtgccatct
    40561 cagcagtgag cttacgtccg gcatgtcctt caagagatac gccatgatta gcggcaacat
    40621 ctgctgctgt cgcatctgca gggtgtttta ccagaccatg aacacctgcc gatttgactt
    40681 ttacgcctgg cagacgttta cgcagcaagc gctcgccaat gggcgaacgg caaatgttgc
    40741 cggtacaaac caccaggatg gagttaaatt ttagttgggc catgtttgaa tccaccgtga
    40801 agtctctgtc aggtcatgca ccccggaaat cgtcggtacc agcagagaaa tcacacggtt
    40861 ccaacgagcc agcggcgcgg tagtgacata aacaatgtcg taaggttcaa gctggaattc
    40921 cgttccgagt atcattgccg atgcgtcctt cgcattcagc tgataaatat tggcgatttt
    40981 gccattctgc ttgttttgcg ttgcacgaat aacaaaaatc cccgtcgcat cagcgacatc
    41041 ctgattcata ccctcagcgt tacccagcgc ttccgccagg gtcataccgc tgcggtccat
    41101 tttcagcgtg ctctgtttac ccacttcacc catcacgaag actttcagat catcgttgcg
    41161 cggaataaat aaaatatcgc ccgggtgcag cagtttgttc tggcgcaagt cgccacgctg
    41221 catcagcgca tagaggttca ctttggtctt tacgccattc tgggtgagca ccacgttgcg
    41281 ccagtctgca tctgcggtca gaccgcccgc ggcgttaatc gcatccatga tggtcagagg
    41341 aatattggta atcggctgct gacccgattt gctgacttcg ccggtgacgt acgctttttg
    41401 cgatcggaac gccgcgacgc tgacatcgac ttgcgggctt tcaatgactg aatcgagacg
    41461 cgctgtaatc tcgttgcgta cttgggtaag tgttttcccg gccactttca ggcgaccaat
    41521 ataggggtag aaaatcgcac catcggcgtt aacccagttg ccggtatcac tggcgctacg
    41581 gtattgccct gcgggggtgg ttagttccgg gtgatcccag accgtaacca tcaacacatc
    41641 accaatcccg atacgatatt catagtttgc gatttgctgc tccagctccg ggttagcctg
    41701 cgacataatc ggtttggcgc gcaactgatc aatcaatcct ggcgtgacgg gatagatatt
    41761 gaccattttg tccaggtcat actgattgtc aggtagttca atgacatcct tgttcctggt
    41821 cgataaattc tgaccaggaa caagggtaca tgctgtcaaa gacagaacag ccaatgtcag
    41881 taccgaaaac ttaaaaatgt tctttttcat tggtttatat ttatcagtca atgtaatgtt
    41941 atgaattacg tcaggttatt gtccaaccgg tacttctcgc tctgccgtca ttggatagag
    42001 ctggtatttg cgtgacagca tttgtccacc atcacgcgtc aatggtgtcc acgaaaccac
    42061 cgcgcggttg cggttaggtc caatggtcat caagtcgaat ggaatcgaga tataaaaacc
    42121 tttactaaag ccgccttcgc cgtagtcatc tttagatacg ttactgattg ccgcccatac
    42181 ccctaccgcc acgccgctgt caaagcgttt ggcgacgtcg atcgttgctc ctttatcttt
    42241 tgccagatat tgcccaacgc taagtttcat cagtacgcca ttgagcgtcg gcgggttcca
    42301 gtaagccgtc acgaaaccag ttggcgtgga ataatcggtg aagcgcatca tgttgtccca
    42361 gtcacgttgc ttcacgtagt taacgtccac acccagcgcc cagctggcat ctagcgggcg
    42421 ataaagcagc tcggaaccga caccggcgta catcgtttcc agataaccgc catacacctg
    42481 gccatagaaa ccattgccta agtcggcaaa gtagttcgcc tgcaagttgt tgagataaac
    42541 gtcattgcga acgtaatcac ggatatgcgt gcgcacgcgg ggcagggtag agtccgcggg
    42601 caacagcgaa gacttaaact tgtcgtagtt gttgtaaata ttggtgaaaa taccgccatc
    42661 aagcagcagg tggtcggtaa accagtagcg ggcactggac atcagcccca gctggaacat
    42721 atagaaatct tccgggccgc ccagcgactg tgaaagtgtt gggttgaaag agtagctaaa
    42781 gcgatcttca cgaatacggt agccccgacc aaaggcagaa agatcttctg cttcaacacg
    42841 ttgttgttga agttgctctg attgaccagg cgctgtacca gccagctgtt tgcgcaggct
    42901 ggctacgtcg gtttcggtag tcaccatcgc catatgctcg cgcttttgcg tcacgctaat
    42961 cttctcaacg ccttgcggca ggttattcac cagaatccgg ttggcacgat cgaccgcttc
    43021 gcgagaatca cggtatttgt attgttgacc agacatatac agcgtcttat cgcgcagctg
    43081 aatttccggt gcttcaaaac ctgcgttgta cttcagcgcg gtaagttggt tcgctactgt
    43141 ggtgtactgc aatccttcag attcaggcgc aggttgatat gccggttttg gcgtatcgcg
    43201 cagggcaggg cgcagatcgt tgaaattggt ccgtaacgtg aagccaaaca tcaacgtgtt
    43261 accgcgttca taactcaggt tgagatctgc ccagctggca gcgcgataaa ctgcgccgac
    43321 gttgaaatgg cttgcctgag gcagtttgcc agcgaaatca ttctggtaat tgttgccatc
    43381 gtattcgagt ttcagacgca ggggattcca cggcgtttga tactcaatgc cgccaaagat
    43441 ggaagccggg ccacgaaaga tatcgctaaa gctgatatcg cccgcatcgt gagactctgc
    43501 gcgatgacaa tatttatcgt tcacccggca aaacgggttg gtaatattgc ccgcattacc
    43561 ggcgtagccc catgccatcc cgagggtgaa atcaaatggc cccgcttgct tgctggccac
    43621 cagatactca ccgtcaaaca gacccgtacc agcaatatca cgtttaccaa acgccacttg
    43681 cggtagccag taaccttctt cccacaggcg aagtttaaaa tcgaatgatt tgtctttgta
    43741 tgactgatcg ccgctgaaat cttcccactg gctatatttg cgtgtgcgca catccgtata
    43801 acgaatggtg ccttccagcc atgggaacag cgccacggag gtggagtaga accggtattg
    43861 atcgttatcc cggtagttga cgctgaattc accttccggt gcgatgcgcg catttggcat
    43921 ctgcaacaat cctgtgccgc caaagtctga ttgcgacgaa cccagcggat ccgggtaggt
    43981 taatacttca gcatgacagg cactggagac ggcaatggcc aggcagctta aaagataaga
    44041 attcttcttc atcagtcagg aacacgttgc gttaaaacag acacaatctg gtcatttaaa
    44101 tcagcatatt tttcgggcag tacatgcgca gaaaagccca accaaagctg gctgccaggc
    44161 ggtgggtcca catgtctttt attccacagg gcaacagggg cgacgacagt ctcaccctca
    44221 ggcgtaatca ccataacgtt attcttgtcc gcgcctgcaa ggcgggggtg atcttgcaga
    44281 taatcggtaa cgctacggcc tgcctgccag ggcaattgcc cggccccaga aaccgcaccc
    44341 agcagagtaa tagtcaccgg acgctgtacg gtatagagcg tatagtcccc gaccaacggg
    44401 ggattgctgt tctcatccac tcgaacaaaa tcagggtcca gtttgaccgg taagcgacca
    44461 gtgatattga gattgagtaa ctgctggcgc acagatttaa tcgttgccgc cacatcgtcg
    44521 tcagcttctg cttcccagga agcaagctgt gccatgacat gttggtagtc tttaagcgct
    44581 ttagctttcg ccgcagagtc ggtcagcaag gcaccaggcc accagaggcg atcgcgcagt
    44641 tgcggttgtg tcaccaactg gacaacattt tccatggggc caacggaaag tgtctgttgt
    44701 tcgccaggca gataaatagt caccgttcct tgcgcaaagg catggggtgt cattacgtaa
    44761 agtacgctgg caatgaaata cgactgtaat ttattcatgg tgcgggttta agaaacgtca
    44821 tttctacggg aataacccct gcgcctaaca tttgccgact ttgacgaacc tggccagtag
    44881 ccgaatcgac ccagaatgtg ttttgccact gtttttctgg ccgcgtggaa gtcacctctt
    44941 cctgccagac attacacagc acattgcgac ccgcaatatt cagcgtctct aatccagcaa
    45001 aggaaaaagt agaactcagg gtcgcagagc gaaaatggtt gtcttcactc cagagaatat
    45061 cgcgcgtcca gcggctgcca tcttttattg ccagcgcgtt acgcagaggg tcctgcccgg
    45121 aatttgtcac ttccagcaga ttattattaa gtttgacggt ttttaaaaga cgtccattgt
    45181 gggtaaccag catggcgtta tcctgggata accatttgct ttgttcttgt tctatatatc
    45241 ccagtaccac aaagattcgt tgcccttcat taaggcgtaa atacatcgtg gaataaggca
    45301 acgcctggat ctgctgatcc gctacggtga tatcctgatt atcgaaaagg ctggcgcgaa
    45361 atgtatcgac catactttgc tggctgtgcg tacatcccgc aagaaatagt gcgaaaatcg
    45421 ataaaataag agggcgcacc tttaatcctt gaaaggttaa ttaaaaaaat gcaaatcttt
    45481 aaagcccggt acgaatatcg caaccgggta tcatttaact ttaatttcga cgcgttaaag
    45541 cagtattagc gtgtagtgga cgtggtggtt gaggtgttat gagaaccgcc atcgccactg
    45601 tcatttgctg caacaactgc caacgtcgcc acaccaacag ccgttgccac accgacaact
    45661 gtcgccgtgc cgacagcgcc agcagccacg ccaccagtgg tagtagcagt cgtggttgcg
    45721 ccggtagtgg tcgttgtggt gccagtagta cccgtcgttg cctcggtccc gtttgttgct
    45781 tcaggggcag caaacgcagc tggcgtcgtc aacatgaagg ccataaggat tgcagaaagc
    45841 ttgtgtttca taacttttcc tttattcatc gcatggacaa tacgtacgct tgagatcagg
    45901 attgtctact ttgagtataa catccttgtg aaatctccct ttcctcatac cgcttgcact
    45961 atatactgcg ggtaggaaag gcgcgcagag ggaaatataa gattgttaac tatccccctc
    46021 tggaaatacg acttgtgagc ataagataaa tcttagcaaa atacaaatta aagataagga
    46081 aattgttacg aaagctatta attattgcta gtaatatagt ttcaagtggt actataactg
    46141 gctgttaaat ggcatttata actattaggt gcagagatat tcgcttaaat ggattagttt
    46201 ctttgtggaa aagtaactga tgttataata tatgatgttg actattgcac tattccaata
    46261 aaaccagtca gctttaaaca agcagcgtca tattaagaga gataaacatt tgccgctgtt
    46321 ggtcctcgca ggccatttac gcggcaaaat tccacacgta atcctggtat aagcacttct
    46381 gcgtcgcggg gagtgaatgc ggaaatatgg acctgaactt ctttacgacc gtcggagggg
    46441 ataatgaatc ctttgccgct tttgcgatca aaggttttga caattcctgt cattttacgg
    46501 gacaaacaaa ttccttactg aaaatactgc gctgcactat acggggttaa taaaataaag
    46561 ccagcgatat ttaagaccgc cggacggcta aaataaaatt tgcttaatct caattatcat
    46621 gcgttaatag ctgcgtcggt ttgaaagaca gacagcatac aaagtagttt actaaagcag
    46681 ttctcattat caggcattat ccccttcttt tgagtctctc tcctgaacac taagtagttt
    46741 ctgtattaaa gccctgtttg ccgaaaggcc caaaatgaag gaagtaaaat atgtctaata
    46801 aaatgactgg tttagtaaaa tggtttaacg cagataaagg ttttggcttt atcactcctg
    46861 atgatggcag caaagacgtt ttcgtccatt tcactgccat ccagagcaat gaattccgca
    46921 cgctgaacga aaatcagaaa gttgaatttt ctattgagca ggggcaacgt ggccccgcgg
    46981 cagcgaacgt tgttacgctc taaggttgcc gttattactc aacatctcca tttccgctgt
    47041 ccatgttgtc atggttcaca gtaccgcaca tcggcattcg atgtgacgga gcgaaatcct
    47101 ttgggcgcta agtgtatttt ttgtaaatcg acgatgatca cctttgataa cgtcacgctg
    47161 caaatacgca ctgaccatgc gccgctggat ttcacaaaat aatatcaggc tccctcg
//
LOCUS       DAJVUK010000009        43879 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.009, whole genome shotgun sequence.
ACCESSION   DAJVUK010000009 DAJVUK010000000
VERSION     DAJVUK010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 43879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43879
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.009"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            83..625
                     /gene="lpfE"
                     /locus_tag="OQQ57_000561"
     CDS             83..625
                     /gene="lpfE"
                     /locus_tag="OQQ57_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbrial protein LpfE"
                     /protein_id="HCS1955433.1"
                     /translation="MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELV
                     KDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFA
                     LDAGGATGVGLKIKTAAGVQQFPENTTPIPVEFAINGDGAHQLNYIASYVPIRADATI
                     GRADATVDFTVQYSTNNFTS"
     gene            865..2556
                     /gene="eptB"
                     /locus_tag="OQQ57_000562"
     CDS             865..2556
                     /gene="eptB"
                     /locus_tag="OQQ57_000562"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HCS1955434.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
     gene            2648..2724
                     /locus_tag="OQQ57_000563"
     tRNA            2648..2724
                     /locus_tag="OQQ57_000563"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2682..2684,aa:Pro,seq:cgg)
     gene            3468..5075
                     /gene="dppA"
                     /locus_tag="OQQ57_000564"
                     /pseudo
     CDS             3468..5075
                     /gene="dppA"
                     /locus_tag="OQQ57_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418001.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter substrate-binding
                     protein DppA"
     gene            5383..6402
                     /gene="dppB"
                     /locus_tag="OQQ57_000565"
     CDS             5383..6402
                     /gene="dppB"
                     /locus_tag="OQQ57_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HCS1955435.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPASGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            6412..7314
                     /gene="dppC"
                     /locus_tag="OQQ57_000566"
     CDS             6412..7314
                     /gene="dppC"
                     /locus_tag="OQQ57_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HCS1955436.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDMLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
                     IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
                     LIVQASLGFSNAILDIAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
                     LLTVLAFNLMGDGLRDALDPKLKQ"
     gene            7325..8308
                     /gene="dppD"
                     /locus_tag="OQQ57_000567"
     CDS             7325..8308
                     /gene="dppD"
                     /locus_tag="OQQ57_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HCS1955437.1"
                     /translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            8305..9309
                     /gene="dppF"
                     /locus_tag="OQQ57_000568"
     CDS             8305..9309
                     /gene="dppF"
                     /locus_tag="OQQ57_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HCS1955438.1"
                     /translation="MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(9339..10610)
                     /locus_tag="OQQ57_000569"
     CDS             complement(9339..10610)
                     /locus_tag="OQQ57_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HCS1955439.1"
                     /translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRMLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
     gene            11086..11193
                     /locus_tag="OQQ57_000570"
     CDS             11086..11193
                     /locus_tag="OQQ57_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCS1955440.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(11280..12959)
                     /gene="bcsG"
                     /locus_tag="OQQ57_000571"
     CDS             complement(11280..12959)
                     /gene="bcsG"
                     /locus_tag="OQQ57_000571"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HCS1955441.1"
                     /translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
                     TDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS
                     LWPAGQPTTTVTTTGGNAAATVETTGGAPVVGDMPAQTTPPTTANLNAWLNNFYNAEA
                     KRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATS
                     YSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLK
                     EVRENGGMQTELMDQTNLPVILLGFDGSPVYDDTTVLNRWLDVTEKDKNSRSATFYNT
                     LPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
                     RMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSFLAISDLVVRVLDGK
                     IFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
     gene            complement(12956..13147)
                     /gene="bcsF"
                     /locus_tag="OQQ57_000572"
     CDS             complement(12956..13147)
                     /gene="bcsF"
                     /locus_tag="OQQ57_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HCS1955442.1"
                     /translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
                     YVKPAGTLRRTEKARATKK"
     gene            complement(13144..14715)
                     /gene="bcsE"
                     /locus_tag="OQQ57_000573"
     CDS             complement(13144..14715)
                     /gene="bcsE"
                     /locus_tag="OQQ57_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HCS1955443.1"
                     /translation="MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLAN
                     QTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKIKLFSMLNHEKGLYYLTRDLQCS
                     IDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
                     LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAE
                     IQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQI
                     EPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTM
                     IESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGV
                     LVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLP
                     TGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRI
                     PEPMRLLDDAVERSS"
     gene            14988..15176
                     /locus_tag="OQQ57_000574"
     CDS             14988..15176
                     /locus_tag="OQQ57_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjR family protein"
                     /protein_id="HCS1955444.1"
                     /translation="MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQ
                     LAAALKRWPLLAEFAQQK"
     gene            15188..15940
                     /gene="bcsQ"
                     /locus_tag="OQQ57_000575"
     CDS             15188..15940
                     /gene="bcsQ"
                     /locus_tag="OQQ57_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HCS1955445.1"
                     /translation="MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
                     RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRL
                     SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
                     ALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEY
                     RSDALAAEEILTLANWCLLNYSGLKTPVGSAS"
     gene            15937..18549
                     /gene="bcsA"
                     /locus_tag="OQQ57_000576"
     CDS             15937..18549
                     /gene="bcsA"
                     /locus_tag="OQQ57_000576"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HCS1955446.1"
                     /translation="MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPLDPVRYLIQTCWLLIGTSRKETPKPRRR
                     AFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLIL
                     ALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTS
                     TLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIF
                     VPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTH
                     EHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFS
                     PDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVE
                     TVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLDNP
                     LTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLP
                     HMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGGLV
                     EEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVLGG
                     AVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEG
                     QKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWALWQ
                     DSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFILRRPER
                     SETAQPSDQALAQQ"
     gene            18560..20899
                     /gene="bcsB"
                     /locus_tag="OQQ57_000577"
     CDS             18560..20899
                     /gene="bcsB"
                     /locus_tag="OQQ57_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HCS1955447.1"
                     /translation="MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTE
                     QNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGM
                     RSDEVVTKAMLNLEYMPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPIN
                     PLFITDFNRVRLEFVGHYQDVCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPV
                     PFFDPRDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRN
                     AIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQ
                     GNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAI
                     NVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEAN
                     RLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQN
                     HVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMET
                     LLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQAT
                     ESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLA
                     DSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYAL
                     ANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE"
     gene            20906..22012
                     /gene="bcsZ"
                     /locus_tag="OQQ57_000578"
     CDS             20906..22012
                     /gene="bcsZ"
                     /locus_tag="OQQ57_000578"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HCS1955448.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTSEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            21994..25467
                     /gene="bcsC"
                     /locus_tag="OQQ57_000579"
                     /pseudo
     CDS             21994..25467
                     /gene="bcsC"
                     /locus_tag="OQQ57_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026226.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
     gene            25549..27537
                     /gene="hmsP"
                     /locus_tag="OQQ57_000580"
     CDS             25549..27537
                     /gene="hmsP"
                     /locus_tag="OQQ57_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HCS1955449.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            27720..29006
                     /gene="dctA"
                     /locus_tag="OQQ57_000581"
     CDS             27720..29006
                     /gene="dctA"
                     /locus_tag="OQQ57_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctC"
                     /protein_id="HCS1955450.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            29226..30722
                     /locus_tag="OQQ57_000582"
     CDS             29226..30722
                     /locus_tag="OQQ57_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCS1955451.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWLYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDIPPAQ"
     gene            complement(30818..31747)
                     /gene="kdgK"
                     /locus_tag="OQQ57_000583"
     CDS             complement(30818..31747)
                     /gene="kdgK"
                     /locus_tag="OQQ57_000583"
                     /EC_number="2.7.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417983.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygluconokinase"
                     /protein_id="HCS1955452.1"
                     /translation="MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPA
                     ALTVHYVTALGTDSFSQQMLDAWHGENVDISLTQRMENRLPGLYYIETDSTGERTFYY
                     WRNEAAAKFWLESEQSTAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG
                     GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTH
                     NAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT
                     GGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            31979..32746
                     /gene="pdeH"
                     /locus_tag="OQQ57_000584"
     CDS             31979..32746
                     /gene="pdeH"
                     /locus_tag="OQQ57_000584"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417982.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HCS1955453.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLGDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
     gene            32816..34876
                     /locus_tag="OQQ57_000585"
     CDS             32816..34876
                     /locus_tag="OQQ57_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HCS1955454.1"
                     /translation="MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(35110..36432)
                     /locus_tag="OQQ57_000586"
     CDS             complement(35110..36432)
                     /locus_tag="OQQ57_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HCS1955455.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLLILFALF
                     AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETQHQSL"
     gene            complement(36843..37856)
                     /gene="yhjD"
                     /locus_tag="OQQ57_000587"
     CDS             complement(36843..37856)
                     /gene="yhjD"
                     /locus_tag="OQQ57_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HCS1955456.1"
                     /translation="MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGK
                     TQP"
     gene            complement(37905..38804)
                     /locus_tag="OQQ57_000588"
     CDS             complement(37905..38804)
                     /locus_tag="OQQ57_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417978.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1955457.1"
                     /translation="MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQL
                     GTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLNELDGLFQQDATSISGKLRIDIPPGI
                     AKNLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGK
                     LTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGG
                     MLTVNSSENYLAAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQR
                     RELSRRVNLFMQWLAGVMKEHLD"
     gene            39324..39926
                     /locus_tag="OQQ57_000589"
     CDS             39324..39926
                     /locus_tag="OQQ57_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCS1955458.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            complement(39977..41626)
                     /locus_tag="OQQ57_000590"
     CDS             complement(39977..41626)
                     /locus_tag="OQQ57_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
                     /protein_id="HCS1955459.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVKRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
     gene            42030..43427
                     /gene="ccp"
                     /locus_tag="OQQ57_000591"
     CDS             42030..43427
                     /gene="ccp"
                     /locus_tag="OQQ57_000591"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HCS1955460.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
                     ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
                     HSLNGVYTPYMQDKQ"
     gene            43638..>43879
                     /locus_tag="OQQ57_000592"
     CDS             43638..>43879
                     /locus_tag="OQQ57_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HCS1955461.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT        10544 a        11002 c        11918 g        10415 t
ORIGIN      
        1 ccgttagcac taccggaaaa ttacccgctg ccggggatta tagcggtatt gctaccatac
       61 atgtcgaact ggagtaacag tcatgaagcg aacaatactt gcgttatgcc tgctgcctct
      121 ttccttttcg tcattcgcgg caaccacgga tttagggccg aaaggaacat tgaaattcac
      181 ccttaaaatc agccagggtg cttgcgaact ggtgaaagac agcgttgagg ttgacatggg
      241 caccgcggtt ctcaaaaagc cggtaagaat cggaacggaa attaatccca ctcctttttc
      301 catcggcctg aaaaactgta gcgaagtggt cagagcctac gtgactatgg acggtacacc
      361 caatgcagac gactcaaatc tttttgcgct ggatgcgggt ggcgctacag gcgttgggct
      421 gaaaatcaaa accgctgctg gagtacaaca gttcccggaa aatacaacgc cgataccggt
      481 tgagtttgca attaacggtg atggcgcaca tcaactgaac tatatcgcca gctacgtgcc
      541 tattcgcgcc gatgcaacta ttggtcgcgc agatgcaacg gtcgacttta ctgtacagta
      601 cagtacgaat aatttcacat cttaagggcc agttaactgg ccctttttac tgctttttgt
      661 aacgctaaag tctcttttca aacttgcatt tttgtaaatt tgtgcttcat gcacactctt
      721 tccccacact ttttcgcttt gctgtggtct acttattcgc gcgtgtagat tttacttatc
      781 tgactacctc cgcacttttc ccctgccggg cctgaaaagc cgctaagcag ggtgttatca
      841 cctgtttgtc cagggtttgt ttgcatgaga tacatcaaat cgattacaca gcagaagctg
      901 agctttttgc ttgcaatcta tattggcctt tttatgaatg gcgcggtttt ttatcgccgc
      961 ttcggcagct atgcgcacga ttttaccgtc tggaaaggcg tttctgctgt tgttgaactg
     1021 gccgccaccg tactggtgac cttcttttta ctacgtcttc tatcgctgtt tggccgccgc
     1081 agctggcgta ttctggcgtc gctggtggtg ctcttttccg caggtgccag ctattacatg
     1141 accttcctta atgtggtcat tggttatggc atcatcgctt ccgtcatgac caccgatatc
     1201 gacctgtcaa aagaagttgt tggtctgaac tttattctct ggttaatcgc cgttagtgca
     1261 ttgcctctta tccttatctg gaataaccgc tgtcgctaca ccttgctccg acaactgcga
     1321 accccagggc agcgtattcg cagcctggcg gtcgtcgtac tggcgggtat tatggtttgg
     1381 gcaccgattc gtttgctgga tatccagcag aagaaagtgg agagggcgac cggcgttgat
     1441 ttgccgagtt atggcggtgt cgtagcgaac tcttatctgc catcaaactg gctttctgcg
     1501 ttggggctgt atgcctgggc gcgggtcgat gaatcttccg ataataattc attgcttaat
     1561 ccggcgaaga agtttacata ccaggctcca caaaacgttg atgatactta tgtcgtgttt
     1621 atcatcggtg aaaccacgcg ttgggaccat atgggtattt tcggctatga gcgtaatacc
     1681 acgccgaaac tggcccagga gaaaaatctg gcggcgttcc gtggttactc ctgtgatacc
     1741 gcaaccaaac tctcactgcg ttgcatgttt gtacgtcagg ggggcgcgga agataatccg
     1801 cagcgcacat taaaagaaca gaacattttc gcggttctga agcagttagg attcagttct
     1861 gacctctacg ctatgcagag cgaaatgtgg ttctacagca acacgatggc ggacaacatt
     1921 gcttatcgtg agcagattgg tgcggagcca cgtaatcgtg gcaagccggt agatgatatg
     1981 ttgctggtag acgaaatgca gcaatcgcta gggcgcaacc cggatggtaa gcatctgatc
     2041 attctgcata ccaaaggttc gcattttaac tacacccagc gttatccgcg tagcttcgcg
     2101 cagtggaagc cggaatgtat tggtgttgat agcggctgta ccaaagcgca gatgatcaac
     2161 tcctatgaca actcggtgac ctatgtggat cactttatct ccagcgtgat tgatcaggtt
     2221 cgcgataaga aagcgattgt gttctacgca gctgaccacg gtgagtcaat taatgaacgc
     2281 gagcacctgc acggcacgcc gcgtgaattg gcaccgccgg agcagttccg cgtaccgatg
     2341 atggtctgga tgtcagataa atatctggaa aatccggcca atgcgcaggc atttgcgcag
     2401 ctgaaaaaag aagccgacat gaaagtgcca cgccgtcacg tagagctgta cgataccatc
     2461 atgggttgtc ttggctatac ttcaccggat ggtggaatta acgaaaacaa caactggtgt
     2521 cacatcccgc aggcaaaaga ggcagcggct aactaagcgg cctgctgact ttctcgccga
     2581 tcaaaaggca ttttgctatt aagggattga cgagggcgta tctgcgcagt aagatgcgcc
     2641 ccgcattcgg tgattggcgc agcctggtag cgcacttcgt tcgggacgaa ggggtcggag
     2701 gttcgaatcc tctatcaccg accaaattcg aaaagcctgc tcagcgagca ggcttttttg
     2761 catttgaagc ccatgaggat gagaacctcc gggggctggg aggttcgact cgacgtaggc
     2821 ctgataagac gcgccagcgt cgcatcaggc aacggcaccg cacttattgt cggatgcggc
     2881 gcgaccgcct tattcgacca acacaccaca cattttcctg ccaactttgc gccccatatc
     2941 tcactatcca ttaacggatt tgtgacagaa accattgtct ttttttatat ttgcttaaat
     3001 ctttttttgc gttacttatg gctggcgctg gcattttccg ctgtgcgttt tagcgttcat
     3061 ggtattaatc gctcagatat ccaccttttc ctcagatttt tttcattaaa tgcataaaac
     3121 ttaatcacca aatgttgcta aatattaagc tgattgttct ggttatgttg gagtagcaca
     3181 aatttctctg ctgcaaatag ctgtttgaag ttttttaatc tttgtttgtg ggttctcacc
     3241 gttggtgtaa atcccggttg gctgtattga cgttttcaca ttctgttgac agattgtagg
     3301 tcacgagggg cattttatgg aggatccgca ctgttacact gatgttaatt agtacggcat
     3361 ccccacctca taacgttgac ccgaccgggc aaaaaacaaa aaaggtcagg tagcgacaac
     3421 ccactgcaaa gggttaaaac aacaaacatc acaattggag cagaataatg cgtatttcct
     3481 tgaaaaagtc agggatgctg aagcttggtc tcagcctggt ggctatgacc gtcgcagcaa
     3541 gtgttcaggc taaaactctg gtttattgct cagaaggctc tccggaaggg tttaacccgc
     3601 agctgtttac ctccggcacc acctatgacg cctcttccgt accgctttat aaccgcctgg
     3661 ttgaatttaa aatcggcacc actgaagtga taccgggcct cgctgaaaag tgggaagtca
     3721 gctaagacgg taaaatctat accttccatc tgcgtaaagg tgtgaagtgg cacgacaata
     3781 aagaattcaa accgacgcgt gaactgaacg ccgatgacgt ggtgttctcg ttcgaccgtc
     3841 agaaaaacgc gcaaaacccg taccataaag tctctggcgg cagctacgaa tacttcgaag
     3901 gcatgggctt gccggagctg atcagtgaag tgaaaaaggt ggacgacaac acagttcagt
     3961 tcgtactgac tcgcccggaa gcgccgttcc tcgctgatct ggcaatggac ttcgcctcta
     4021 ttctgtcaaa agaatatgct gatgcgatga tgaaagccgg tacaccggaa aaactggacc
     4081 tcaacccaat cggaaccggt ccgttccagt tacagcagta ccaaaaagat tcccgtatcc
     4141 gctacaaagc gtttgatggc tactggggca ccaaaccgca gatcgatacg ctggtcttct
     4201 ctattacccc tgatgcttcc gtgcgttacg cgaaattgca gaagaatgaa tgccaggtga
     4261 tgcagtaccc gaacccggca gatatcgctc gcatgaagca ggataaatcc atcaacctga
     4321 tggaaatgcc ggggctgaac gtcggctacc tctcgtataa cgtgcagaaa aaaccgctgg
     4381 atgacgtgaa agttcgccag gcactgacct acgcggtgaa caaagacgcg atcatcaaag
     4441 cggtttatca gggcgcgggt gtatcagcga aaaacctgat cccgccaacc atgtggggct
     4501 ataacgacga cgttcaggat tacacctacg atcctgaaaa agcgaaagcc ttgctgaaag
     4561 aagcgggtct ggaaaaaggt ttctccatcg acctgtgggc gatgccggta caacgtccgt
     4621 ataacccgaa cgctcgctgc atggcggaga tgattcaggc agactgggcg aaagtgggcg
     4681 tgcaggccaa aatcgtcacc tacgaatggg gtgagtacct caagcgtgcg aaagatggcg
     4741 aacatcagac ggtaatgatg ggctggactg gcgataacgg ggacccggat aacttcttcg
     4801 ccaccctgtt cagctgcgcc gcctctgaac aaggttctaa ctactcaaaa tggtgctaca
     4861 aaccgtttga agatctgatt caaccggcgc gtgctaccga cgaccataac aaacgcgttg
     4921 aactgtacaa gcaatcgcag gtggtgatgc acgatcaggc tccggcactg atcatcgctc
     4981 actccaccgt gtttgaaccg gtacgcaaag aagtcaaagg ctatgtggtt gatccattag
     5041 gcaaacatca cttcgaaaat gtctctatcg aataattaaa agccatacaa gactgatggt
     5101 aaaggcaaaa ctgcctgatg tgctccgctt atcaggccta cgaaaattct gcaatgtatt
     5161 gaatttacac gattttgtag gccggataag gcgttaacgc cgcatccggc ataaacaaag
     5221 cgcactttgt caacaatctg tatacccggt ggcgctgtgc ctctgcgtgc agcgccatcc
     5281 ggcagcaata cttcattctc tgtccgacaa gggcgggaat tgatttgtga gcaatacaga
     5341 cacgcagttc caggctgcgg gtcactatag agaatccggg ttatgttgca gtttattctc
     5401 cgacgtttgg gactcgtcat ccccacgttt atcggtatta cccttctcac atttgccttt
     5461 gtccacatga tcccgggcga tccggtgatg atcatggcag gcgaacgtgg gatctcccct
     5521 gagcgtcacg cgcagctgct ggctgaactc ggcttagata aaccgatgtg gcagcagtat
     5581 ctccattaca tttggggcgt aatgcacggc gatctaggca tttcaatgaa aagccgaatt
     5641 ccagtatggg aagagttcgt gccgcgcttt caggccacgc tggaacttgg cgtctgcgcg
     5701 atgatttttg ctacggcagt cggtattccg gttggtgtgc tggctgcggt taaacgcggt
     5761 tccattttcg atcacactgc agttggcctg gcgctgaccg gctactcgat gccgatcttc
     5821 tggtggggca tgatgctgat catgctggtt tcggtgcact ggaacctgac gcccgcctcc
     5881 ggtcgcgtga gcgatatggt gttcctcgat gactccaatc cgttaaccgg ttttatgcta
     5941 atcgacaccg ccatctgggg tgaagacggc aactttatcg atgccgtcgc ccatatgatc
     6001 ttgcctgcca ttgtgctggg tactattccg ctggcggtca ttgtgcgtat gacacgctcc
     6061 tcgatgctgg aagtgctggg cgaggattac atccgcaccg cgcgcgccaa agggctaacc
     6121 cgcatgcggg tgattatcgt ccatgcgctg cgtaacgcga tgctgccggt ggtgaccgtt
     6181 atcggcctgc aggtgggaac attgctggcg ggggcgattc tgaccgaaac catcttctcg
     6241 tggcccggtc tgggacgctg gttgattgac gcactgcaac gccgcgacta tccggtagtg
     6301 cagggcggcg tattgctggt ggcgacgatg attatcctcg tcaacttgct ggtcgatctg
     6361 ctgtacggcg tggtgaaccc gcgtattcgt cataagaagt aaggggacat catgtcacag
     6421 gttactgaaa ataaagtgat tagcgcaccg gtgccgatga ccccgttaca ggagttctgg
     6481 cactatttta aacgcaacaa aggcgcggtc gtcgggctgg tttacgtcgt catcgtgctg
     6541 ttcatcgcga tctttgccaa ctggattgca ccctataacc cggcggaaca gttccgcgat
     6601 gcactgctcg ccccgccagc ctggcaggaa ggcggcagca tggcgcactt gctgggcacc
     6661 gatgacgtag gccgtgatat gctgtcgcgc ctgatgtacg gtgcgcgcct gtcgctgctg
     6721 gttggctgtc tggtagttgt gttatcgctg attatgggcg ttattctcgg cctgatcgcc
     6781 ggttactttg gcggcctagt cgataacatc attatgcgcg tggtcgatat catgctggcg
     6841 ctgccaagtc tgctgctggc gctggtgctg gtggcaattt tcggcccgtc gattggtaac
     6901 gccgcgctgg cactgacctt cgttgccttg ccgcactatg tgcgcttaac ccgcgccgcc
     6961 gtgctggtgg aagttaaccg cgattacgtc accgcgtctc gcgtggcggg tgccggggcg
     7021 atgcgtcaga tgtttattaa catcttcccg aactgccttg cgccgctgat tgttcaggcg
     7081 tcgctcggtt tctctaacgc cattctcgat atagctgctc ttggtttcct cggcatgggg
     7141 gcacagccgc caacgccgga gtggggcacc atgctctccg acgtgttgca gttcgcgcaa
     7201 agcgcctggt gggtcgtgac cttcccgggt ctggcgatcc tgctgacggt gctggcattt
     7261 aacctgatgg gtgacggtct gcgtgacgcg ctcgatccca aactgaagca gtaagaggtt
     7321 cgagatggcg ttattaaatg tagataaatt atcggtgcat ttcggcgacg aaagcgcacc
     7381 gttccgcgcc gtagaccgca tcagctacag cgtaaaacag ggcgaagtgg ttgggattgt
     7441 gggtgagtcc ggctccggta agtcggtcag ttccctggcg attatggggc tgattgatta
     7501 tccgggccgc gtaatggcgg aaaaactggt gtttaacggt caggatttgc agcgtatatc
     7561 agaaaaagag cgccgcaacc tggtgggtgc cgaagtggcg atgatcttcc aggacccgat
     7621 gaccagcctt aacccgtgct acaccgtggg tttccagatc atggaagcga ttaaggtgca
     7681 tcagggcggc aacaaaagta cccgccgtca gcgggcgatt gacctgctga atcaggtcgg
     7741 tattcccgat ccggcttcgc gtctggatgt ttacccgcat cagctttccg gcggcatgag
     7801 ccagcgcgtg atgatcgcca tggcgattgc ctgtcgacca aaactgctga ttgccgatga
     7861 gccgaccacc gcgctggacg tgaccattca ggcgcaaatc atcgaactac tgctggagct
     7921 acagcagaaa gagaacatgg cgctggtgtt gattacccat gacctggcgc tggtggcgga
     7981 agctgcgcat aaaatcattg tgatgtatgc aggccaggtg gtggaaacgg gcgatgcgca
     8041 cgccatcttc catgcgccgc gtcacccgta tactcaggca ttgctgcgtg cgctgccaga
     8101 atttgctcag gacaaagaac gtctggcgtc gttgccaggt gtcgttcccg gcaagtacga
     8161 ccgcccgaac ggctgcctgc ttaacccgcg ctgcccctat gccactgaca gatgtcgcgc
     8221 tgaagaaccg gcgctgaata tgctcgctga cgggcgtcag tccaaatgcc attacccact
     8281 tgatgatgcc gggaggccga cactatgagt acgcaagagg ccaccctgca acaaccgctg
     8341 ttgcaggcta tcgacctgaa aaaacattat ccggtgaaga aaggcatgtt cgcgccggaa
     8401 cgtctggtta aagcgctgga tggcgtttcg tttaaccttg aacgtggcaa aacgctggca
     8461 gtagtgggcg aatctggctg cggtaaatcg accctcggtc ggttgctgac gatgattgaa
     8521 acgcccaccg gtggcgagct gtattaccag gggcaggatc tgcttaagca cgatccgcag
     8581 gcgcagaagc tgcgtcggca gaaaatccag atcgtcttcc agaaccctta cggttcgctg
     8641 aatccgcgta aaaaagtcgg gcaaattctt gaagagccgc tgctgatcaa caccagctta
     8701 agcaaagaac agcgtcggga aaaagccctg tcgatgatgg cgaaagtcgg cctgaaaacc
     8761 gagcactatg accgctatcc gcatatgttc tccggcggtc agcgtcagcg tatcgccatc
     8821 gcccgtggtc tgatgctcga cccggatgtg gtgattgccg atgaaccggt ttccgcgctg
     8881 gatgtttcag tgcgcgcgca ggtgctgaat ctgatgatgg atttgcagca ggagttgggg
     8941 ctgtcttatg tctttatctc ccacgacctg tcggtggtgg agcacattgc tgatgaagtg
     9001 atggtgatgt acctgggccg ctgcgtggag aagggaacga aagaccaaat cttcaataac
     9061 ccgcgccatc cgtacactca ggcgctactt tccgcgacgc cgcgcctgaa cccggacgat
     9121 cgccgcgagc gcatcaagct cagcggtgaa ctaccaagcc cactgaatcc accgccgggt
     9181 tgcgccttca acgcccgctg tcgtcggcgc ttcggcccct gcacccagtt gcagccgcag
     9241 ctaaaagact acggcggtca actggtagct tgttttgctg ttgatcagga tgaaaatccg
     9301 cagcgttaac tcacaaaacc ggggccatgc gctccggttt actcaatcag cttcaacagt
     9361 ggcgacaagc atagcaaaat gccgtaaagc agaattagcc aggctttaaa tccgcgaagt
     9421 ttttccagtt gtgcgacttt atagatcagg aaaaacggaa tgaggcacga cacaatgcca
     9481 tataacgggc ttcccaactg aaagaacacc agcaccgata cacgaaacga aacccaaatc
     9541 gtcaacgtaa tgacgataaa agcgcagatc gccagagtca gcatgcgtga gttaattttc
     9601 ttggtatcaa taattcggct taacagattg agaataatgc ctttaatagc ctcgtggaaa
     9661 ccgagataaa tgccaaagaa tgcggtcagt acggcaaaga tattcagcac cgtagaggtg
     9721 atatgaatga tatgtccagg gatcacctgc gcggccagtg ccagtgccga gatattttgt
     9781 tcaaaggcag aaacggcttc ttcgtggcta attgagaagg taaacgaaaa ggcaaaaaac
     9841 aggatcaccg cgatgagcgt gatataacta attcggtggg tacgcagcgc gagccgggtt
     9901 gccagtactt tatctgcttc ccgtttacga taggcaatat tcattgggtt aagtacctga
     9961 ataaataccg cagaaaagaa gcaaaatgga attgtaagca ggacatcgcg gaaaaagacg
    10021 gaggcttgcg ggaaggcggt tatattggcg aaattccagt gcgggatcat cgcaaaaccg
    10081 aacacgacaa taatccctac tttgaccacc accattggcc cggaaatctt aaacagtaat
    10141 cgttcaccac cagacgcaat cgctaccagt acggcgaaaa tagcgacttt ataaagtaga
    10201 gattgtgaaa gatcggcatc ggttaaaccg aaggttttca ggtacgaggc gctgtcgaaa
    10261 accacggaga gagagtagat aaaaatcccg tggataatca tcaaaaagta gataaccccg
    10321 aggaaaattc cccagttctt ccccaggtaa tgactgataa tatcggtgta gtcattacag
    10381 gaatcgcttt cagaaagggt ttttaaataa atgtcctgca ctacccaggt ggcaggataa
    10441 gcaatgatcg ctgcggtaat aaatacccaa attcccttca agccaatttg tactggcatc
    10501 agcacggttc cggcaccaat cgccatgcct atgcataata aaacccagcc gaagtcgtag
    10561 cgtgtaaacg gcaatttctg attgtgtttc gatagtgtgt tgtgctgcat aaagtcctgt
    10621 ccagaaagaa gtcggcctcg caaaaatgaa taaacccagt ttctcttgcg caacaggtgg
    10681 agaagtcgaa tacgcagtat gtaaaaaatg aggcaacaga ttcactgggg aggtcgcgag
    10741 gaggcgcaat tctacaaaat tgcgcatttc actaccagtc tggagtcagc ccggatatga
    10801 actgcaacta ttgcaaataa agaaattaag ctggaaggca tcgcgcaatg aggaagattg
    10861 ccgggtgctg acagtaaaaa gcaatcgtaa aatcagcggc aagccgaaag ggttccggtg
    10921 aggcgcaatg ttgcgggggc tttatccctg gtggcattgg ttgctggaga gagaaaaccc
    10981 ccgcacgttg caggtatgca cctgacaaca tcacgggggc taatcttgaa cccaaacaac
    11041 tcaagaatag ccgcgaaacg ttggcattac aacacaggcg gctatatgac gctcgcagaa
    11101 ctgggcatgg ccttctggca tgatttagcg gctccggtca ttgctggcat tcttgccagt
    11161 atgatcgtga actggctgaa taagcggaag taatgtgtca tgcgggcgtc aggctgccgt
    11221 aatggcaatt tgcgcccgga tcaggccgca gaggttaaac tctgcggcct ttttcgtgct
    11281 tactgcgggt aaggcaccca gtcgccgccg ttcaggcgaa cgtacggttt atcctggtat
    11341 tgaataacta ctgcatttga gttctcggag accggtgctg tttgtggcaa cccactggtg
    11401 agttttttcc agtcaacatt gtcttcggtg aaaatcttgc catcaagaac gcgaaccacc
    11461 agatcggaga tagccaggaa gctgctcggt tggtcgatga caatcggtgc cccctgatgt
    11521 ggtgccttca tgccgaagaa tttcacccca acggggacgt ctgtgataga cgggctaggg
    11581 atatcacgta ggccagatac ctgcattctg tcgcccttca gcgcgccgcc gtgttccggc
    11641 accacgacca ccatcacttt acgacccgat ttctccagtt cagtaaagaa ggcgtccagt
    11701 tcatcaaaga atttctgcgc ccgcgctttg taatccgctg ttttgctgac ccccggataa
    11761 tggttgccgt catgcagtgg aagcgtgttg tagaacgtgg cactacggct gtttttatct
    11821 ttttcggtaa cgtccagcca gcggttaagc acggtggtat cgtcataaac cggcgaacca
    11881 tcaaagccca gcaaaataac cggcagattt gtttgatcca tcaattcagt ctgcatgccg
    11941 ccattttcgc gaacttcttt caaaaaaccg ccgaactggc cgttatgtcc catcatcagg
    12001 tgctgggtaa agcccagttt cgaaaggtta tcaaacagat agcagtcgtt atttgccggt
    12061 tgatacagat tagtgtgcga agtctgcccg cagctggcgc gcagtaaacg gatcgccgcc
    12121 gggccactgt aggaggtggc ggagttaaag ttcttgaact caatatcgaa atgcgaccac
    12181 agtggatgcg acatcaaccc ggcggcttct atatccgacc aggaaagcga acagatgtta
    12241 atcaccagta gttcaaatgg ctgagcatca gcgggcagcg aagacgggaa ggtcgattta
    12301 cgtttcgcct ccgcgttata gaaattattc agccaggcgt taaggttcgc cgttgttggc
    12361 ggtgtagttt gtgcgggcat atcacccact accggtgcgc cacccgtcgt ctcaacggtt
    12421 gccgctgcgt taccacccgt cgttgttaca gtggtcgtcg gttgtccggc tggccacaag
    12481 gagaaacttg gtcccgccag ggtaagtacg ttcagccata gcagtatggc aaccacaaaa
    12541 acggtaatgc gaatccattg tgacaggaat aaccaggcca ctaataaaac aaaaatggcc
    12601 ccaatcatct gccagttaat aaagcgtgtg acaaggtcga ttaaataatc ggtactgaac
    12661 cccgccacct gcgaaccctg gctcattatg ctttccgggc caggcaacca ggtgtcatgc
    12721 cagaacaaag caaagccgat cggcagggca atccagtggc gcaagcgatg caggctgtag
    12781 cgcggaatgg gcatcagcag aaacgcggca aacaccaaat tgaggagcgg atggaagtta
    12841 agatatcccg cccacaacag gccgaactta accagaaaat agaagttcca gccggaaagg
    12901 ccgcgccagt attgccagag ggaagaaggc atggcggtat tttgcgtaaa ttgagtcatt
    12961 ttttggttgc cctggctttt tccgtgcggc gtaatgtccc ggccggttta acataacgag
    13021 gtttagcaaa gaacaaacgt aaggtgtcgc gaatgcgtcg caaagagtgc cgcgccagat
    13081 agcccagcgg gaaaaatatc agtgcgcaaa cgacaataat ttcaatgata tcgctgatgg
    13141 tcatcatgat gagcgctcca cagcatcatc taacagtcgc atgggttctg gtattcgtcg
    13201 ccagtggcga ccatcgtgct cggcattgat gaccggttta gaactttgcg ttaaaggcag
    13261 cggcatgccc cattgttctg gggcaagcag gcgcatctgc accagctcgg cactgatttg
    13321 atcatcttca aaccagacca tacggtttga gaaaatgtcg ccagtaggca atgggaaaat
    13381 atgattcaac gcggtatcca gatcgttaat ccgacagaat gagagaaaca gcaccagccg
    13441 attaccgcca atggtcatga tatcgccggt acggttaggg cgacacagcg tcagggcttg
    13501 ttcaacgcgg atacccggta ccggacgtag ggcaaccaga acgcctttac cgtgggcagg
    13561 taatagaggg ttattcatca tgttgttgac ggcattacag aacacatccc acttctggaa
    13621 accacgcagt ttgagcggct gggtcattga cagcaaggta gtgatatctt ccggcacata
    13681 gcgactaaac ttctgccctt gcacgctttc gatcatcgtc agacaacggg agagtggcgc
    13741 attccacgga ataaccatat ttgcaccgca ggccaataac aaacgttcat cggtggcgcg
    13801 caggctagcg gtattttccc gcacgaggat tttcatcgca ctaccgcgct ggcgacgcag
    13861 ggtatgaatg ctgcgggcca gtggctcgat ttgcgcattt tgctgtaaag aaaagaccac
    13921 cgtcgccgcc tgagcggtac gggcttcatt gaacaggact tcgttattgt tgaacagttg
    13981 ccagtgttcc gatagcggcg gcgcaccttc cagtacagca acattactca gaatgcgttt
    14041 ttcgtcgctg cgtggttgga tctccgcctc ttcgctttga actaatgtcc agataccatt
    14101 ttgttgctga acgctaagct gctgacgggc gctgacccct ttttcgttgc accagaaggc
    14161 aatatccagc aaatgttggt caccctgaaa acgcaaactg gcaagaccaa aaagtgaacg
    14221 gtattcctca agcaacaatg aaaattgttt atcgttatta tttccgggat taattaccaa
    14281 aagcgaacaa tgggttaacc tgctccattt attcatttta tccaaccatg agcgaagccg
    14341 ctcggcagga atgttttgcc atgcgttatt tgcgcaaaca agaataaaaa ggtaattatg
    14401 gggatcaata gaacactgca aatcacgggt caaatagtat agaccttttt catgatttag
    14461 cattgaaaat aattttattt tttccggccc ttgataatca tctaattgaa agattttcgc
    14521 cggatcgctg tccatgctaa tgaccgcgac gtgtgcggtt tcagcctggg atgcaattgt
    14581 ttgattcgcc agactgatag catcttcatg gcgatcgacg ttaaaccacc agacgccgcc
    14641 tgctggcata tgtcgcagct catcccataa tgatgagata ccgatagaga atacagggcc
    14701 cacaatgtcc ctcatgtcac cattttgtct gattatcagt ttactagcga aagctaagaa
    14761 ataaacctac cattgaaatt aaaacttatc agatttagca tgtgaatcaa tttagaaggt
    14821 cacaagacgt gtgattttag tcttttcgtt tttaactttt tctgttgcgt aacggaaagt
    14881 caaaaagtga gcaaattccc gtctcgccgt aaacaataaa ccggcgaaat gctcacggtt
    14941 agaattgtct catgaacggt acggttattt catagggatc aagcaaaatg aataacaatg
    15001 aaccagatac tctgcctgat cccgcgatag gctatatctt ccagaatgat attgtggcgt
    15061 taaagcaggc attttcactg cctgatattg attatgccga tatttcccaa cgcgaacagt
    15121 tggccgcggc attaaaacgc tggccgttgc tggcagagtt tgcgcaacaa aagtagggga
    15181 ttggtgaatg gccgtactgg gattgcaggg ggtgcgggga ggcgtgggga caacaaccat
    15241 caccgccgca ttagcctggt cattacaaat gttgggagaa aatgtcctgg tggtcgatgc
    15301 ctgcccggac aacttgttgc gcctgtcatt taatgttgat tttacccacc gtcagggctg
    15361 ggccagagcg atgctggatg gccaggactg gcgtgacgct gggttgcgct acacctcgca
    15421 gctcgatttg ctgccttttg gtcagttatc cattgaagaa caagaaaatc cacagcacag
    15481 gcaaacccgg ctgagcgata tttgctccgg cttacagcaa ctaaaagcca gcgggcgtta
    15541 ccagtggatt ttaatcgact taccgcgtga tgcctcgcag ataacccacc agctgctgag
    15601 tttgtgcgat cactcgctgg caatcgtcaa tgtggatgcc aactgccata tccgactgca
    15661 tcagcaagcg ctgccggatg gcgcacatat tttgattaat gacttccgta ttggcagtca
    15721 ggttcaggac gatatttacc agctttggtt gcaaagccag cgccgattac tgccgatgct
    15781 cattcatcgt gatgaagcga tagctgaatg cctggcggct aagcaaccag taggtgaata
    15841 tcgcagtgat gcgctggcgg ctgaagagat actgacgctg gcgaactggt gcctgttgaa
    15901 ctactccggg ctgaaaacgc cagtcgggag tgcatcatga gtatcctgac ccggtggttg
    15961 cttatcccgc cggtcaacgc gcggcttatc gggcgttatc gcgattatcg tcgtcacggt
    16021 gcgtcggctt tcagcgcgac gctcggctgt ttctggatga tcctggcctg gatttttatt
    16081 ccgctggagc acccgcgctg gcagcgtatt cgcgcagaac ataaaaacct gtatccgcat
    16141 atcaacgcct cgcgtccgct ggacccggtc cgttatctca ttcaaacatg ctggttactg
    16201 atcggtacat cgcgcaaaga aacgccgaaa ccgcgcaggc gggcattttc aggtctgcag
    16261 aatattcgtg gacgttacca tcaatggatg aacgagctgc ctgagcgcgt tagccataaa
    16321 acacagcatc ttgatgagaa aaaagagctc ggtcatttga gtgccggggc gcggcggttg
    16381 atcctcggta tcatcgtcac cttctcgctg attctggcgt taatctgcgt tactcaaccg
    16441 tttaacccgc tggcgcagtt tatcttcctg atgctgctgt ggggtgtagc gctgatcgta
    16501 cggcggatgc cggggcgctt ctcggcgcta atgttgattg tgctgtcgct gaccgtttct
    16561 tgccgttata tctggtggcg ttacacctct acgctgaact gggacgatcc ggtcagcctg
    16621 gtgtgcgggc ttattctgct cttcgctgaa acgtacgcgt ggattgtgct ggtgctcggc
    16681 tacttccagg tcgtatggcc gctgaatcgt cagccggtgc cattgccgaa agatatgtcg
    16741 ctgtggccgt cggtggatat ctttgtcccg acttacaacg aagatctcaa cgtggtgaaa
    16801 aataccattt acgcctcgct gggtatcgac tggccgaaag acaaactgaa catctggatc
    16861 ctcgatgacg gcggcaggga agagtttcgc cagtttgcgc aaaacgtggg ggtgaaatat
    16921 atcgcccgca ccactcatga acatgcgaaa gcgggcaaca tcaacaatgc gctgaaatat
    16981 gccaaaggcg agttcgtatc gattttcgac tgcgaccacg taccaacgcg atcgttcctg
    17041 caaatgacca tgggctggtt cctgaaagag aaacagctgg cgatgatgca gacgccgcac
    17101 cacttcttct cgccggaccc gtttgaacgc aacctggggc gttttcgtaa aacgccgaac
    17161 gaaggcacgc tgttctatgg tctggtgcag gatggcaacg atatgtggga cgccactttc
    17221 ttctgcggtt cctgtgcagt aattcgtcgc aaaccattgg atgaaattgg cggtattgct
    17281 gtcgaaacgg taaccgaaga tgcgcacacg tctctgcgcc tgcaccgtcg tggctacacc
    17341 tctgcatata tgcgtattcc gcaggcggcg gggctggcga ccgaaagtct gtcggcgcat
    17401 atcggtcagc gtattcgctg ggcacgcggg atggtgcaaa tcttccgtct cgataacccg
    17461 cttaccggta aagggctgaa attcgcccag cggctgtgct acgtcaacgc catgttccac
    17521 ttcttgtcgg gcattccacg actgatcttc ctgactgcgc cgctggcgtt cctgctgctt
    17581 catgcctaca tcatctatgc gccagcgttg atgatcgccc tgttcgtgct gccgcatatg
    17641 atccatgcca gcctgaccaa ctcgaagatc cagggcaaat atcgccactc tttctggagt
    17701 gaaatctacg aaacggtgct ggcgtggtat atcgcaccac cgacgctggt ggcgctgatt
    17761 aacccgcaca aaggcaaatt taacgtcacc gccaaaggtg gactggtgga agaagagtac
    17821 gtcgactggg tgatctcgcg gccctacatc ttccttgttc tgctcaacct ggtgggtgtt
    17881 gcggtcggca tctggcgcta cttctatggc ccgccaaccg agatgctcac cgtggtcgtc
    17941 agtatggtgt gggtgttcta caacctgatt gttcttggcg gcgcagttgc ggtatcggta
    18001 gaaagcaaac aggtacgccg atcgcaccgc gtggagatga cgatgcccgc ggcaattgcc
    18061 cgcgaagatg gtcacctctt ttcgtgtacc gttcaggatt tctccgacgg tggtttgggg
    18121 atcaagatca acggtcaggc gcagattctg gaagggcaga aagtgaatct gttgcttaaa
    18181 cgcggtcagc aggaatacgt cttcccgacc caggtggcgc gcgtgatggg taatgaagtt
    18241 gggctgaaat taatgccgct caccacccag caacatatcg attttgtgca gtgtacgttt
    18301 gcccgtgcgg atacatgggc gctctggcag gacagctacc cggaagataa gccgctggaa
    18361 agtctgctgg atattctgaa gctcggcttc cgtggctacc gccatctggc ggagtttgcg
    18421 ccttcttcgg tgaagggcat attccgtgtg ctgacttctc tggtttcctg ggttgtatcg
    18481 tttattctgc gccgcccgga gcggagcgaa acggcacaac catcggatca ggctttggct
    18541 caacaatgat gataacgcga tgaaaagaaa actattctgg atttgtgcag tggctatggg
    18601 gatgagtgcg ttcccctctt tcatgacgca ggcgacgcca gcaacgcaac cactgatcaa
    18661 tgctgagcca gctgtagccg cccagacgga acaaaatccg caggtggggc aagtgatgcc
    18721 gggcgtgcag ggcgctgatg cgccagtcgt ggcgcagaac ggtccttcgc gtgatgtgaa
    18781 gctgaccttt gcgcaaattg cgcctccgcc gggcagcatg gtgctacgtg gcattaaccc
    18841 gaacggcagc attgagtttg gtatgcgcag cgatgaagtg gtgacgaagg cgatgctcaa
    18901 cctcgaatac atgccatcgc catcgttact gcctgtccag tcgcagttaa aggtttatct
    18961 caatgatgag ctgatgggcg tactgccagt gaccaaagaa cagttgggta aaaaaacgct
    19021 ggcgcaaatg cccattaacc cactgtttat taccgacttc aaccgtgtgc ggctggagtt
    19081 tgtcggccat tatcaggacg tgtgcgaaaa cccggccagc accacgcttt ggctggatgt
    19141 tgggcggagc agtggactgg atctgaccta tcagaccctg aatgtgaaga atgacctgtc
    19201 acacttcccg gtgccattct ttgacccgcg cgataaccgt actaacacct tgccgatggt
    19261 ctttgcgggt gcgccggatg ttgggctgca acaagcatct gccattgtcg cctcgtggtt
    19321 tggttcgcgt tctggctggc gtgggcagaa cttcccggtg ctctataacc aactgccgga
    19381 tcgtaatgcc attgtctttg caaccaacga caaacggccg gacttcctgc gcgatcatcc
    19441 ggcggtaaaa gccccggtga ttgagatgat caaccatccg cagaatcctt acgtcaaact
    19501 gctggtggtg tttggtcgtg acgacaaaga cctgttgcag gcagcgaaag gtatcgctca
    19561 gggtaacatt ctgttccgtg gtgaaagcgt ggtagtgaat gaagtgaaac cgctgctacc
    19621 gcgtaagccg tacgatgcgc cgaactgggt acgtaccgat cgtccggtca catttggcga
    19681 actgaaaacc tatgaagaac agttacaatc cagcggtctt gagccagcag cgattaacgt
    19741 ttcgctaaac ctgccgccgg atctctacct gatgcgcagt accggcattg atatggatat
    19801 taattaccgc tacaccatgc cgccggtgaa agacagttcg cggatggata tcagcctgaa
    19861 taaccagttc ctgcaatcct tcaacctgag cagcaaacag gaggcgaacc gcctgctgct
    19921 gcggattccg gtattacaag gtttgctgga tggcaaaaca gatgtctcta ttccggcgct
    19981 gaaactgggc gcgaccaacc agctgcgctt cgactttgag tatatgaacc cgatgccggg
    20041 cggttcggtg gataactgta ttaccttcca gccggtgcag aatcatgtgg tgattggtga
    20101 cgactccacc atcgacttct cgaagtatta ccacttcatc ccgatgccgg atctacgcgc
    20161 ctttgctaac gcgggcttcc cattcagccg gatggcggat ctgtcgcaaa ccatcaccgt
    20221 gatgccgaaa gcgcctaacg aagcacagat ggaaacgttg ctgaatactg ttggttttat
    20281 cggcgcacag acgggcttcc cggcgattaa tctgacggtg accgatgatg gcagcaccat
    20341 tcagggcaaa gatgccgaca tcatgatcat cggtggtatc ccggacaaac tgaaagacga
    20401 taagcagatc gacctattgg tgcaggcgac cgaaagctgg gtgaaaacac cgatgcgcca
    20461 gaccccgttc cccggcattg tgccggacga gagcgatcgc gcggcagaaa cccggtcaac
    20521 gctgacctct tccggtgcga tggcggcggt gattggcttc cagtcgccgt ataacgacca
    20581 gcgcagcgtg attgcgctgt tggcagatag cccacgcggt tatgaaatgc ttaacgatgc
    20641 ggtgaacgat agcggcaaac gcgccaccat gttcggttcg gtcgcggtga tccgcgagtc
    20701 cggtatcaac agcctacgtg ttggcgacgt ttattacgta ggtcatctgc cgtggttcga
    20761 gcgcgtgtgg tatgcgctgg caaaccatcc gattctgctg gcggtgctgg cggctatcag
    20821 tgtgatattg ctggcatggg tactgtggcg tctgctgcga attattagtc gtcgtcgtct
    20881 taacccggat aacgagtaat tgaagatgaa tgtgttgcgt agtggaatcg tgacgatgct
    20941 gttgttggct gcctttagtg ttcaggcagc ctgtacctgg cctgcctggg agcagtttaa
    21001 aaaggattac atcagtcagg aagggcgcgt catcgacccc agcgacgcgc gcaaaatcac
    21061 cacctccgaa gggcaaagtt acggtatgtt ctttgccctg gcggctaacg accgtgcagc
    21121 tttcgataat attctcgact ggacgcagaa caatctcgct cagggttctt taaaagaacg
    21181 tttgcccgcc tggctgtggg gcaagaaaga gaacagtaag tgggaagtgc tggacagcaa
    21241 ttcggcctcc gatggtgatg tctggatggc ctggtcgttg ctggaggcgg ggcgtttgtg
    21301 gaaagagcag cgttataccg acatcggcag cgcgttgcta aaacgtatcg cgcgggagga
    21361 agtggtgacg gtgcctgggc tgggttccat gttgttaccg ggcaaagtgg gttttgctga
    21421 ggataacagc tggcgtttta accccagcta cctgccgccg acgctggcgc agtatttcac
    21481 ccgctttggc gcgccgtgga ctacgctgcg cgaaaccaat caacgtttat tgctggaaac
    21541 cgccccgaaa ggcttttcgc cagactgggt gcgttatgag aaagacaaag gctggcagct
    21601 aaaagccgaa aaaacattga tcagcagcta cgacgccatc cgcgtttaca tgtgggtagg
    21661 catgatgcct gacagcgatc cgcagaaagc gcggatgctc aaccggttta aaccgatggc
    21721 gacattcact gagaaaaacg gttatccgcc ggaaaaagtg gatgtggcta cggggaaagc
    21781 gcagggtaaa ggaccagttg gtttttctgc cgccatgctg ccctttttac aaaaccgcga
    21841 tgcgcaggcc gttcagcgtc agcgcgtggc cgataacttt cccggcagcg atgcctatta
    21901 caactatgtg ctgaccctgt ttggacaagg ctgggatcaa caccgtttcc gcttctcgac
    21961 aaaaggtgag ttattacctg actggggcca ggaatgcgca aattcacact aaacatattc
    22021 acgctttccc tcggtctggc cgtcatgccg atggtcgagg cagcaccaac cgctcagcaa
    22081 cagttgctgg agcaagttcg gttaggcgaa gcgacccatc gtgaagatct ggtgcaacag
    22141 tcgttatatc ggctggaact tattgatccg aataacccgg acgtcgttgc cgcccgtttc
    22201 cgttctttgt tacgttaggg cgatattgat ggcgcgcaaa aacagctcga tcggctgtcg
    22261 cagttagcgc cgagttcaaa tgcgtataaa tcgtcgcgga ctacgatgct actttccacg
    22321 ccggatggtc gtcaggcact gcaacaggca cgattgcagg cgacgaccgg tcatgcagaa
    22381 gaagctgtgg cgagttacaa caaactgttc aacggtgcgc cgccggaagg tgacattgct
    22441 gtcgagtact ggagtacggt ggcgaaaatt ccggctcgcc gtggcgaagc gattaatcag
    22501 ttaaaacgca tcaatgcgga tgcaccgggc aatacgggcc tgcaaaacaa tctggcgcta
    22561 ttgctgttta gtagcgatcg ccgtgacgaa ggttttgccg tcctggaaca gatggcaaaa
    22621 tcgaacgccg ggcgcgaagg ggcctctaaa atctggtacg ggcagattaa agacatgccc
    22681 gtcagtgatg ccagtgtgtc ggcgctgaaa aaatatctct cgatctttag tgatggcgat
    22741 agcgtggcgg ctgcgcaatc gcaactggca gaacagcaaa aacagctggc cgatcctgct
    22801 ttccgcgctc gtgcgcaagg tttagcggcg gtggactctg gtatggcggg taaagccatt
    22861 cccgaactac aacaggcggt gcgggcgaac ccgaaagaca gtgaagctct gggggcgctg
    22921 ggccaggcgt attctcagaa aggcgatcgc gccaatgcag tggcgaatct ggaaaaagcc
    22981 ctcgcactgg acccgcacag cagcaacaac gacaaatgga acagtctgct gaaagtaaac
    23041 cgctactggc tggcgatcca gcagggcgat gctgcgctga aagccaataa tcctgaccgg
    23101 gcagaacgcc tgttccagca ggcgcgtaat gtcgataaca ccgacagtta tgcagtgctg
    23161 gggctgggcg atgtggcgat ggcgcgaaaa gattatcccg ccgccgaacg ttattatcag
    23221 cagaccttgc gtatggacag cggcaacact aacgccgtgc gcgggctggc aaatatttac
    23281 cgccagcaat cgccagaaaa agctgaagcg tttatcgcct cgctctctgc cagtcagcgg
    23341 cgtagcattg atgatatcga acgcagcctg caaaacgacc gtctggcaca gcaggcagag
    23401 gcactggaaa accagggcaa atgggcgccg gcggcagcac ttcagcggca acgactggcg
    23461 ctggaccccg gcagcgtatg gattacttac cgactttcgc aggatctctg gcaggccgga
    23521 caacgcagcc aggccgatac gttaatgcgc aatctggcgc agcagaagtc gaacgacccg
    23581 gagcaggttt acgcttacgg gctgtacctc tctggtcatg accaggacag agcggcgctg
    23641 gcgcatatca acagcctgcc gcgcgcgcag tggaacagca atattcagga gctggttaat
    23701 cgactgcaaa gcgatcagat gctggaaacc gctaatcgcc tgcgagaaag cggcaaagaa
    23761 gctgaagcgg aagcgatgct gcgtcagcaa ccaccttcca cgcgtattga cctcacgctg
    23821 gctgactggg cgcagcagcg acgtgattac accgccgccc gcgctgcata tcagaatgtc
    23881 ctgacgctgg agccaactaa cgccgatgcc attctggggc tgacggaagt ggatattgct
    23941 gccggtgaca cagcggcggc acgtagccag ctggcgaaac tgcccgctac cgataacgcc
    24001 tcgctgaaca cacagcggcg cgtggcgctg gcgcaggcgc agcttggaga taccgcagcg
    24061 gcgcagcaga cgtttaataa gttgatcccg caggcaaaat ctcagccacc gtcgatggaa
    24121 agcgcgatgg tgctgcgcga cggtgcgaag tttgaagcgc aggcgggcga tccaaagcag
    24181 gcgctggaaa cctacaaaga cgccatggtc gcatccggtg tgactacgac gcgtccgcag
    24241 gataacgaca cattcacccg actgacccgt aacgacgaga aagatgactg gctgaaacgc
    24301 ggcgtgcgca gcgatgcggc gggcctctat cgccagcagg atcttaacgt caccctcgag
    24361 cacgattact ggggttcgag cggcaccggt ggttactccg atctgaaagc gcacactacc
    24421 atgttgcagg tggatgcgcc gtattctgac gggcggatgt tctttcgcag tgatttcgtc
    24481 aatatgaacg tcggcagttt ctccactaat gccgatggca aatgggatga caactggggc
    24541 acctgtacat tacaggactg tagtggcaac cgcagccagt cggactccgg tgccagcgtg
    24601 gaggtcggct ggcgaaatga cgtctggagc tgggatatcg gtaccacgcc gatgggcttc
    24661 aacgtggtgg atgtggtcgg cggcatcagt tacagcgatg atatcgggcc gctgggttac
    24721 accgttaacg cccaccgtcg gcccatctcc agttctttgc tggcctttgg tgggcaaaaa
    24781 gactccccga gcaataccgg gaaaaaatgg ggtggcgtac gtgccgacgg tgtggggcta
    24841 agtctgagct acgataaagg tgaagcaaac ggcgtctggg catcgcttag tggcgaccag
    24901 ttaaccggta aaaatgtcga agataactgg cgcgtgcgct ggatgacggg ctattactat
    24961 aaggtcatta accagaacaa tcgccgcgtc acaatcggcc tgaacaacat gatctggcat
    25021 tacgacaaag atctgagtgg ctactcactc ggtcagggcg gttactacag tccgcaggaa
    25081 tacctgtcgt ttgctatacc ggtgatgtgg cgggagcgca cggaaaactg gtcgtgggag
    25141 ctgggggcgt ctggctcgtg gtcgcattca cgcaccaaaa ccatgccgcg ttatccgctg
    25201 atgaatctga tcccgaccga ctggcaggaa gaagctgcgc ggcaatccaa cgatggcggc
    25261 agcagtcagg gcttcggcta cacggcgcgg gcattacttg aacgacgtgt tacttccaac
    25321 tggtttgttg gcacggcaat tgatatccag caggcgaaag attacgcacc cagccatttc
    25381 ctgctctacg tacgttattc cgccgccgga tggcagggtg acatggattt accgccgcag
    25441 ccgctgatac cttacgccga ctggtaagtt ttcagatagc gcctctctta atgccgctgc
    25501 gatcgggtat actcgggcgg caatctggga tttccggggg gagacaattt gcgcgtaagt
    25561 cgctcgttaa caatcaagca gatggcaatg gtggcagccg ttgtcctggt gttcgttttt
    25621 attttttgca ccgttttgct gttccatctg gtccagcaga atcgctataa cacggctacg
    25681 caactggaaa gcattgctcg ctctgtacgc gaacccttat cttcagctat tttgaaaggc
    25741 gatattcccg aagcggaagc tattcttgcc agcattaaac cggcaggcgt ggtcagccgt
    25801 gccgatgtag tgctgcctaa ccagttccag gcgctgcgta aaagttttat tccagagcgc
    25861 ccggtgccgg taatggttac tcgcctgttt gagctaccgg ttcaaatctc gctgggcgtt
    25921 tactcgctcg aacgtccggc aaacccgcag ccaattgcct atctggtact acaggcggat
    25981 tccttccgta tgtataagtt cgtgatgagc accctctcaa cgttagtgac catttactta
    26041 cttttgtcgc ttatcctgac cgtcgccatc agctggtgca ttaaccgcct gattttgcat
    26101 ccgttacgca atattgctcg cgaacttaac gccatcccag cccaggagct tgttggtcac
    26161 caactggcat taccgcgtct gcatcaggac gatgaaatcg gtatgttggt gcgcagttac
    26221 aacctcaacc agcaattgct gcagcgccat tatgaagaac agaacgaaaa tgcgatgcgc
    26281 ttcccggtgt cggatttgcc gaacaaagcc ttgctgatgg agatgctgga gcaggttgtc
    26341 gcgcgtaaac aaaccaccgc gctgatgatc atcacctgtg aaaccctgcg tgatactgcg
    26401 ggcgtgctga aagaggcgca acgagaaatt ctgctgctga cgctggtgga aaaactcaaa
    26461 tcggtactgt cgccacgtat gatcctcgcg cagattagcg gttatgactt tgctgtcatt
    26521 gccaacggtg tacaggaacc gtggcacgca atcaccttag gtcagcaagt gctcactatc
    26581 atgagcgagc gcctgccgat tgaacgtatt caactccgtc cgcactgtag cattggcgtg
    26641 gcgatgttct acggcgatct caccgccgaa cagctttaca gtcgcgctat ttctgcggca
    26701 tttaccgctc gccataaagg caagaatcag attcagttct ttgatccgca gcagatggaa
    26761 gccgcccaga agcggttgac ggaagagagc gatatcctta atgcactgga aaatcatcag
    26821 tttgctattt ggttacagcc acaggtcgag atgaccagcg gtaaactggt cagtgcggaa
    26881 gtgttactgc gtatccagca accggatggc agttgggacc tgccggatgg cttaatcgat
    26941 cgcattgagt gctgtgggct gatggttacc gtcggtcact gggtgctgga agagtcctgt
    27001 cgattgcttg cagcctggca agagcgcggc attatgctgc ccttgtcggt aaacctctct
    27061 gcgctgcaac tgatgcaccc aaatatggtg gcggatatgc tggaactgtt aacccgctat
    27121 cgcattcaac cgggaacact gattctggaa gtgacagaaa gccgacgtat tgacgaccct
    27181 catgctgcgg tggcaatcct ccgtccgctg cgcaatgccg gagttcgggt ggcgctggat
    27241 gatttcggca tgggctacgc agggctgcgt cagctgcagc atatgaaatc gttgccaatc
    27301 gacgtactga aaatcgacaa aatgtttgtt gaaggcttgc cggaagatag cagcatgatt
    27361 gctgcaatta tcatgctggc gcagagcctg aacttacaaa tgattgccga aggcgtggag
    27421 actgaagcac aacgcgactg gctggcaaaa gcgggcgttg gtattgccca gggcttcctt
    27481 tttgctcgcc cactccctat tgaaatcttc gaagagagtt acctggaaga aaagtagcta
    27541 ccccaaactg attacaaaac tttaaaaagt gctggtttgt gcgagccagc tcaaactttt
    27601 taaccttttt gtttcaatta tgatccaggt acatttctgt gatgttgtct gggtgttatt
    27661 ttaaggccgc aggtacctca taaccttaca agacctgtag ttttactaaa ggacacccta
    27721 tgaaaacctc tctgtttaaa agcctttact ttcaggtcct gacagcgata gccattggta
    27781 ttctccttgg ccatttctat cctgaaatag gcgagcaaat gaaaccgctt ggcgacggct
    27841 tcgttaagct cattaagatg atcatcgctc ctgtcatctt ttgtaccgtc gtaacgggca
    27901 ttgcgggcat ggaaagcatg aaggcggtcg gtcgtaccgg cgcagtcgca ctgctttact
    27961 ttgaaattgt cagtaccatc gcgctgatta ttggtcttat catcgttaac gtcgtgcagc
    28021 ctggtgccgg aatgaacgtc gatccggcaa cgcttgatgc gaaagcggta gcggtttacg
    28081 ccgatcaggc gaaagaccag ggcattgtcg ccttcattat ggatgtcatc ccggcgagcg
    28141 tcattggcgc atttgccagc ggtaacattc tgcaggtgct gctgtttgcc gtactgtttg
    28201 gttttgcgct ccaccgtctg ggcagcaaag gccaactgat ttttaacgtg atcgaaagtt
    28261 tctcgcaggt catcttcggc atcatcaata tgatcatgcg tctggcacct attggtgcgt
    28321 tcggggcaat ggcgtttacc atcggtaaat acggcgtcgg cacactggtg caactggggc
    28381 agctgattat ctgtttctat attacctgta tcctgtttgt ggtgctggta ttgggttcaa
    28441 tcgctaaagc gactggtttc agtatcttca aatttatccg ctacatccgt gaagaactgc
    28501 tgattgtact ggggacttca tcttccgagt cggcgctgcc gcgtatgctc gacaagatgg
    28561 agaaactcgg ctgccgcaaa tcggtggtgg ggctggtcat cccgacaggc tactcgttta
    28621 accttgatgg cacatcgata tacctgacaa tggcggcggt gtttatcgcc caggccacta
    28681 acagtcagat ggatatcgtc caccaaatca cgctgttaat cgtgttgctg ctttcttcta
    28741 aaggggcggc aggggtaacg ggtagtggct ttatcgtgct ggcggcgacg ctctctgcgg
    28801 tgggccattt gccggtagcg ggtctggcgc tgatcctcgg tatcgaccgc tttatgtcag
    28861 aagctcgtgc gctgactaac ctggtcggta acggcgtagc gaccattgtc gttgctaagt
    28921 gggtgaaaga actggaccac aaaaaactgg acgatgtgct gaataatcgt gcgccggatg
    28981 gcaaaacgca cgaattatcc tcttaatctc accacttatg cccgcactcc cttccccgag
    29041 tgcgggtgtt tgcgcataat tgacccctgt gcctgaactt accacctggg tgagttcagg
    29101 tttatttcac ttcttccgtg acattttcat gttcttgcgg tctaacacga agtgttttta
    29161 acgtcattta gactgactga caacgggcag ttttttatta ccaggatagt tgatcagggg
    29221 ttcacatgca gggcacaaaa attcgacttt tagcgggcgg tttgctgatg atggccactg
    29281 ctggctatgt gcaggcagat gcgctccagc ctgatccagc atggcaacag gggacgcttt
    29341 ccaacggttt acagtggcaa gtgctgacca ccccccagcg tcccagcgat cgtgttgaaa
    29401 ttcgcctgct ggttaatacc ggttcgctcg ccgaaagtac acaacagagc ggttacagtc
    29461 acgccatccc tcgtattgcg ctaacgcaaa gcggtggcct tgacgcagca caggcgcgtt
    29521 cattgtggca gcaggggatc gaccctaaac gcccgatgcc gccggtaatt gtctcttatg
    29581 acaccacgct gtttaatctg agtttgccca ataaccgtaa cgatttgctg aaagaagcgc
    29641 tctcttatct ggcaaatgcc actggcaaat tgaccatcac accagaaacc atcaaccacg
    29701 cgctgcaaag tcaggacatg gtggcaacct ggcctgccga tactaaagag ggctggtggc
    29761 tctatcgtct gaaagggtca accttgttag gtcacgatcc tgccgatccg ctgaaacaac
    29821 ccgttgaagc ggaaaaaatt aaagatttct atcagaaatg gtacaccccg gatgcaatga
    29881 cgctactggt ggtgggaaac gtggatgcgc gctcggttgt cgaccaaatc aacaaaacgt
    29941 ttggcgaact gaaaggcaaa cgtgaaacgc cagctccggt gccgacgctt tctccgctgc
    30001 gtgcggaagc ggtgagtatt atgactgacg cggtgcgtca ggaccggtta tctatcatgt
    30061 gggatacgcc gtggcagccg attcgtgaat cagccgcact gctgcgctac tggcgtgcgg
    30121 acctggcccg cgaggcgctg ttctggcatg ttcagcaagc gttaagcgcc agtaacagca
    30181 aagacatcgg tcttggattt gactgccgtg tgctgtatct gcgtgcgcag tgtgccatca
    30241 acatcgaatc accaaacgac aagctgaaca gcaaccttaa tctggtggcg cgtgaactgg
    30301 cgaaggttcg cgataaaggt ctgccggaag aagagttcaa tgcgttagtg gcgcaaaaga
    30361 aactggagct gcagaaactg tttgccgcct atgcgcgggc tgataccgat attctgatgg
    30421 gtcagcggat gcgttcgttg caaaatcagg tcgtcgatat cgcgccggag cagtatcaga
    30481 aactgcggca ggatttcctt aacagcctga cggtggagat gttaaatcag gatctgcgtc
    30541 agcagttgtc gaatgatatg gcgttaatac tgctgcagcc gaaaggcgag ccggaattta
    30601 acatgaaagc gttgcaggcg gcctgggatc aaatcatggc cccatcgact gctgctgccg
    30661 ccacctctgt cgccacggat gacgtacatc ctgaagtgac ggatattcca cctgcacagt
    30721 aatgcctgat ggtgatgagt tagcacaacc atcaggtatt tatggatgag ctggatagag
    30781 gggtaacact ttatccagcc ttttgcatat gctgcgttta cgctggcatc gcctcacgcg
    30841 ggataatcgc gccgcgatac tgaataacgg tacttgcggt caggtgcccg cgtttcgccg
    30901 cgttttccgc actgccgccc gtcaaacgta ccgccagata accggcgctg aaagagtcgc
    30961 cagctgcggt ggtatcgatc actttttctt tcggcagttt caccgccgga acatccacta
    31021 acccttcgcc agcaatggac accaggcaag aatccgcccc gcgtttcacc accacttctt
    31081 tcacgcccgc gttatgggtg cgcgcaatga cgtcttccac cggctgttga ccccacagcg
    31141 cgtcttcatc gtccagcgtc aggaaggcga tatccgtgca ttccagcatt tgttggtaca
    31201 cctgctgtgt ctcttctttg ctggcccaca ggcgcggacg atagttattg tcgaaaatca
    31261 cttttccgcc gttggcgcgg cattcgcgca gcagggaaag cagcttttcg cggctggtcg
    31321 ggcttaagat cgccaggcta atcccgctca ggtagagata atcgaaattc gccagctctt
    31381 cgcaaatcgc cgtagactgc tcactctcca gccagaattt ggcggcggct tcgttccgcc
    31441 agtagtagaa cgtacgctcg ccggtgctgt cggtttcaat gtagtaaagg cccggcagac
    31501 ggttttccat ccgttgggtc agggaaatat caacgttctc gccgtgccag gcgtccagca
    31561 tctgctggct aaaactgtcc gttcccagcg ccgttacgta atgaacggtt aatgccgcag
    31621 gatcgacctg acgggcgata tagacggaag tgttcagggt atcgccgccg aaaccgcgct
    31681 taacgtccgc gcctttctcg gaaagctcaa tcatgcattc gccaatcacg gcaatctttt
    31741 tggacatagt cgtgaacctg atctgtaaaa aattagcgtt agtttgcgct gtggtggttt
    31801 gctggtcaac aatattaaaa cagtgttcca ttattttttt gagccagaac gtattcctga
    31861 aagattccgt tgtggagtga ggaaatttac cccggccagg cggtaaagtt ctgcccttac
    31921 gcgccgataa tctttgtcga gtccgggcag catcactttt aaacacagga catctttgat
    31981 gataaggcag gttatccagc gaataagcaa ccctgaagca agcatcgaga gcttgcagga
    32041 acggcgtttt tggttgcagt gtgagcgtgc ttacacctgg cagccgatct atcaaacatg
    32101 cgggcggtta atggccgtgg agctattaac ggtggtcacg catcccttga acccttcgca
    32161 acgcctgccg ccggatcgct attttactga aatcaccgtc agccatcgga tggaggttgt
    32221 gaaagagcag attgatttgc tggcgcaaaa agccgacttc tttatagagc acggcctgct
    32281 ggcatcggtc aatattgatg gccctacgct catcgccctg cgtcagcaac caaaaatcct
    32341 gcgccaaatt gagcgtcttc cctggctgcg tttcgaactg gtggagcata tccgtctgcc
    32401 gaaagattca acctttgcct cgatgtgtga atttggcccg ctgtggctgg gtgattttgg
    32461 taccgggatg gcaaatttct ctgcactaag tgaagtgcgt tatgactaca tcaaaatcgc
    32521 gcgagaactg tttgtgatgc tgcgtcagtc gccggaagga cgcacactct tttctcagct
    32581 tttacatcta atgaatcgct attgtcgcgg ggtgattgtt gagggcgtag aaacgccgga
    32641 agagtggcgt gatgtacaga actcgcccgc attcgccgca caaggctggt ttctttcacg
    32701 cccggcaccg atagaaacgc tgaatacggc ggttctggcg ctataagctg cctcattttc
    32761 cgcctggctg gactatcttt aggactggca caggaagaat atgaggaagc gaacgatgag
    32821 caaggcaggc aaaataactg ctgcgatttc aggggctttc ttgttgttga ttgtcgtggc
    32881 gatcattttg attgcaactt ttgactggaa tcgactcaaa ccgaccatca accagaaagt
    32941 ctctgcggag ttgaatcgtc cgttcgctat ccgtggcgat ctgggcgtgg tgtgggagcg
    33001 gcaaaaacaa gaaactggct ggcgcagctg ggtgccgtgg cctcatgtac atgcagaaga
    33061 catcattctt ggcaatccac cggatattcc cgaagtcacg atggtgcatt tgccgcgagt
    33121 agaggcaacg ctggcaccgc tggcgctgct gaccaaaacg gtctggctgc cgtggatcaa
    33181 gctcgaaaag cccgacgcgc gcctgattcg cctctccgaa aagaacaata actggacgtt
    33241 taatctcgcc aacgatgata acaaagacgc gaatgcaaag ccgtcggcat ggtcgtttcg
    33301 gctggataat attcttttcg atcaagggcg gatcgccatt gatgacaaag taagcaaagc
    33361 ggatctggaa atttttgttg atccgttagg caagccgctg ccgttcagcg aagttactgg
    33421 atcgaaaggt aaagcggata aagaaaaggt gggcgattac gtttttggcc tgaaggcgca
    33481 gggacgttat aacggtgaac cgctcacggg tacgggaaaa ataggcggta tgctggcgct
    33541 gcgtggcgaa gggacgccgt ttccggtaca ggctgatttc cgttcaggta atacccgtgt
    33601 tgcttttgat ggcgtcgtga atgacccaat gaagatgggc ggtgtcgatt tacggcttaa
    33661 attttctggc gattcactgg gtgatctcta tgaactgacg ggcgttctgc tgcccgatac
    33721 cccgccgttt gaaacggatg gtcggctggt agcgaaaatc gacactgaaa aatcgtcggt
    33781 ctttgattat cgcggtttta atgggcgaat tggcgatagc gatatccacg gttctctggt
    33841 ctacaccacc ggaaagccgc gaccaaaact ggaaggtgat gtcgagtcgc ggcaattgcg
    33901 gctggcggac ctgggaccgt tgattggcgt tgattcgggg aaaggggcag aaaagtcgaa
    33961 acggtctgaa cagaagaagg gcgaaaaaag cgttcagcct gcgggcaaag tgctgcctta
    34021 tgaccgcttc gaaaccgata aatgggacgt tatggatgcc gatgttcgct tcaaaggccg
    34081 acgtatcgag catggcagta gcctgccgat tagcgatctt tctactcata tcatcctcaa
    34141 aaatgctgac ctgcgcctgc aaccgctgaa atttggcatg gcgggcggca gcattgcggc
    34201 gaatatccat ctggaaggcg ataaaaagcc gatgcagggg cgggcagata ttcaggctcg
    34261 tcgactgaaa ctgaaagaac tgatgcccga tgtggaactg atgcagaaga cgctggggga
    34321 aatgaacggt gacgcggaac tacgcggtag cggtaactcg gtggcggcgc ttttaggcaa
    34381 cagtaacggc aacctgaaac tgttgatgaa tgacgggctg gtgagccgca acctgatgga
    34441 gattgttggg ctgaatgtcg gcaactacat tgtcggtgcg atatttggtg acgatgaggt
    34501 gcgggtgaac tgcgcggcgg cgaatctgaa tattgccaac ggcgtagcgc gcccgcagat
    34561 ttttgctttc gatactgaga acgcgttgat taatgttacc ggcacggcaa gttttgcttc
    34621 ggaacagctg gatttgacta ttgatccgga gagtaaaggg attcggatta tcacactgcg
    34681 ttcgccgctg tatgtgcgtg ggacgtttaa aaatccgcag gctggggtga aagccggacc
    34741 gctgattgcc cgtggtgccg ttgcggcggc actggcaacg ctggtaacac cggcggcggc
    34801 gttattggca ctgatctcac cttccgaagg ggaggctaat cagtgtcgga cgatattgtc
    34861 gcagatgaag aagtgatgag gttggattgt gtttgctggt gagttcggga gcagcgtgtt
    34921 cccctcaccc taatcctctc cccaaagggg cgaggagact gttttgtgcg tgttgaaaca
    34981 acgagtaccg cttttccgtt cactttctgg gggagggctg ttatgttcgc gatataacat
    35041 ctcgctccgc ttttctccct ctccctttca gggagagggc tggggtgagg gtggctgccc
    35101 acacgatact tacaacgact gatgttgcgt ctcatgggtc agcagcaggg cgattaacgt
    35161 caagccagcc atcgccgcca gatataaccc caccgcacct aacccgtagt tagtctgcaa
    35221 ccaggctgcg atatacggcg caacggaagc cccgagaatc gacgatacgt tgtaagagaa
    35281 cgatgctccg gtgtaacgca cttctgtcgg gaacagctct ggtaacagcg cgcccatcgg
    35341 accgaaggtc agccccatca gacttaaccc cagcagcagg aaggcaaaaa ccagaatcgg
    35401 gttgccagaa ccgagcaaag ggttaaaggc gaatagcgcg aacaggatga gcagcgtggt
    35461 gatgattacc atgcttttac ggcgaccaaa ggcatcagcc agtaatccag cgactggcac
    35521 catcacgcca aaaccaataa ctgccatcat caacatccac aacacttcgt tacgcggcag
    35581 gccaagccca actggcgcgg cggcggtact aaaggtcatg gagtagaccg tcatgatgta
    35641 aaacagcgta taggttgcca gcataatgaa cgtacccagt acggttacgc gaacatgttt
    35701 ggtcagcagc gtacccagcg ggatcttcac ctgttttttc gctttagcga ctttctcaaa
    35761 caccggcgac tcatgcagcg acacgcgaac atacaggccg ataatgacca gcaccgccga
    35821 gaagataaat ggcacacgcc agccccagct cataaactgc tcgtcggtca gtagccagga
    35881 aagcagcaag aaagtgccgt tggcaaagaa gaagccaatc ggtgcgccca gctgcgggaa
    35941 ggagccgtac aatgcacgtt tgcgcggtgg ggcgttttca gtcgccagca gcgccgcgcc
    36001 gccccattca ccacctaagc ccagaccctg accaaatcga gccagcgcca gcagcagcgg
    36061 ggcgaaaata ccaatcgtgg catagcctgg cagcagacca atcaccacgg tcgaaatccc
    36121 catcgttagc aacgaggcga ccagcgtcgc tttacgccca acgcgatcgc caaaatgacc
    36181 aaaaacggca gagccaatag ggcgcgcgac gaaggcgatg gcgaaggtgg cgagcgactg
    36241 tagcgttgct gccgtaggat cgccctgcgg gaagaagata tgcggaaaca caataacggc
    36301 cgcagtggcg taaatgtaaa agtcgaagaa ctcaatggct gtgccaatga gagaggcgac
    36361 aaggacttta ttacgcgagt tgatcggcgt gtattcttgc tcgtggtcga gtgttgtggc
    36421 tgttgcttgc ataatctttt cttatttttt ggctaacgaa tagccatatt acgcacagca
    36481 aaagcgatat ttcaatgtgt aacaaatcgc ggaaatggtc aaaaaccagg caaaaagggg
    36541 ataatgttta ggccagtgat ttttcttcta tgaaatgctt cacataattt tataaatagt
    36601 ggataaaact ggtttcaggt taaataaaag ttaccaactg gatttatatg ctggggttat
    36661 gagttagaat gaaattgttt gctcccaaat agatggctga agaggctctg gggacgagtt
    36721 tcaagaggtt atgtgcgcat tatagccgga tgcgatgctg gcgcatctta tccggcctac
    36781 ggggagccag gccgaataaa atcgtatgcc ggataaggcg tttacgccgc atccggccta
    36841 ttttaaggct gcgttttccc tggcattcgc gggtcgtctt tatattcggc ggtggcaatc
    36901 cacgccgcgc aaaacagcgt caaacgggcg aagaagtaga aaaatgccat cagccccagc
    36961 acggaaccaa atgctgcgcc agagggggat ttcatcagcg atggcagggt gtaggtcatc
    37021 acgattttaa tcacttcaaa accaatagca gccagaaatg ttccgcgaat cagggctttt
    37081 ttgcgcggac ggtggcgcgg caaccgccag aagatccaga agaaaagcag atagttggcg
    37141 aagatggaaa tcgccaggcc aatcaatcgc cacgtcggtt tcagccactc aatgctgttc
    37201 aggtgcaggg cgctaataat catttgctgc gccgaaccgg caaccgaggt gatcgaaagc
    37261 gtcacaatca gcgcaatcaa caaaccaatc agtgaaataa aatcacgcag atattttacc
    37321 cagaacttct cctgatcttg cggcgagcgt tcccagacat cacgcgactg ggcacgaatc
    37381 gcttcacgca ggttacccat ccagttgatg ccggaataaa gtgccaccgc caggccgaca
    37441 agccctacag tcgtacgctg ctgaacggcg gtgttgatgg tgtttttcaa cgtggcggct
    37501 agtgtcggat cgctgatgtt ttgcagaatt ttgtcgaaga tatcctgtag caacatcgga
    37561 tgggaggcca gcacaaagcc ccctgcggca aacgacacca tcaaaatcgg gatcatcgac
    37621 aaaaatgaga aataggtgat agccgcacca aactggttac ccagccgatc gttaaagcgt
    37681 tctgtcgcgc gaatcaggtg cgcaataacc ggttggcgtt ggactttttc ggcagtggtg
    37741 gtgacggttt ccagcgcctg gctaactttg ccgcctttct cgctattatc caactgctta
    37801 atcggctcgt gctccagatc ctgggtggga cgtttgatct cgttttcctg cgtcatccgc
    37861 tcttttgtcc ttctgtcgtg gtcattctta aaaagtatag tcggtcagtc caggtgctct
    37921 ttcattacgc cagccagcca ctgcataaac aggtttacac gccgggaaag ctcccgacgc
    37981 tgcgggtaaa ccagcgaaag ggagagcggc tcggcacggt agccaggtaa tacttcaata
    38041 agccgcccgg cacgcagggc ttcgcgcacg gcaatgcgcg ggatctgaat aatccccaga
    38101 ccggcaagac cggcggcgag atagttttcg ctactattta ccgtcaacat gccgccagac
    38161 ttaaaccact ggacgccatt aacgctggca acctcaaaac ctaacggatg tacacccagg
    38221 tgcggtgtat aacgcactat tgcgtgtgaa gtcagatcat cggggctttg cggataacca
    38281 aagcgcgtca gatagtgcgg actggcacag ttgaccatgg tcagtttgcc gaggggacgg
    38341 gcgataacgc catcttccgg taacgcgcca gtgcgtatca cgcaatcaaa accatcatga
    38401 agaatatcta ccggacggtc atggctactc agttccagct caattcccgg atgcagatag
    38461 agaaattccg acaggcgcgg cagtaacagg tttttcgcga ttcctggcgg gatgtcgatg
    38521 cgtaatttac cgctgatact ggtggcatcc tgttgaaaca gaccgtccag ttcgttgaga
    38581 ttactcaaca catcttttgc ccgttgataa taggtcatgc cttctggcgt gagtttgacc
    38641 cgtcgcgtgg tgcgctggag aagctgggtg ccaagttgat gttccagtgc ctgtatctgg
    38701 cgcgaaacac ttccctttgg caaagcaaag aaatccgctg cgcgggaaaa actttccagc
    38761 tccgcgactt tgatgaacaa ctgcattgcg tgaattttat ccatttcttt gaccgattgt
    38821 tgttcacagc gaaacagtaa cgcgcatatc gcattgttta ttgttttttc taacatctaa
    38881 tgccgggttt cacaatgttg tcatgacgaa tgtggcgatt tctcagcagg aaaagggcgg
    38941 aatagcttta tgagaaaggt gaatcccctt aaacagagcg tatttttcag tgattccctt
    39001 taaagtgaat agaggacgta ttggctattt gtgcttattt ttgtctcatt gccatttgtt
    39061 attttggctt gtagtcgcgg aatttcattt ttaattgcat gcgtactaac caccaatata
    39121 aggaaatcct caaaattgtt ttaaatagtg ccctcgacat gtaatttcag gcgtttagct
    39181 gtaactattt atatcggtaa ctattttcta cgcgtcatct ctgtagaatg gccaccgcca
    39241 aatggcgaat tcttattttt tctcgcgggt aatacccttc cactacttaa gtctttttaa
    39301 catattcagg tggagattca gttatgcaaa tagtcatgtt tgacaggcag tcaatattta
    39361 ttcatggaat gaaaatcagt ttacagcagc gtattccagg ggtgagtatt cagggggcca
    39421 gtcaggcaga cgagttatgg caaaagctgg aaagttaccc tgaagcctta gttatgctcg
    39481 atggcgatca ggatggtgag ttttgctact ggttgctgca aaaaaccgtg gtgcagtttc
    39541 ctgaggttaa ggtgttaatc acggcgacgg attgcaataa acggtggtta caggaagtta
    39601 tccattttaa tgtgctggcc attgtgcctc gtgattcaac cgtcgagaca tttgcgttgg
    39661 cggtaaatag tgcggcgatg gggatgatgt ttctgcctgg agactggcgg acgacgccgg
    39721 aaaaggacat taaagatctc aaatcgttaa gcgcccgcca gcgggagatt ttaaccatgt
    39781 tagcggcggg cgagtcaaat aaggagatcg gcagagcgct gaatatcagt accggaacgg
    39841 taaaagcgca tctggaatcc ctgtatcgcc gtctggaagt gaaaaatcgc acccaggcgg
    39901 caatgatgtt aaatatctcc tcctgaagag gataatttta cagccagcag gaagttagcg
    39961 gctggctgta aaaatattat ggttcgccgt acaaaccaat taaacggcgt accacaccgt
    40021 tagtccagcc aaacccatcc tgcaacggat actcgccacc gccgccttcg cgtggaacac
    40081 catcggcaat atggtatttt tcgatcagtt tgtgctgttc cagatagaac tgattcaccg
    40141 tcttcagcca gcttcgcgcg atttcatcac ccagaaggtc atcgccgtac attttaaatc
    40201 cctgaatcgc catccattgt aacggtgccc agccgttggg tttatcccac tgttcaccgg
    40261 tttcgtactc gcttgccaga atcccgccag gtgtcagtaa ccgactgcgc acggcatttg
    40321 ccagacgatc ggcctgttca tggttcgcca taccgacata gagtggcaca atggcggcag
    40381 cggaaaacag cgccagttgt tcgcgtcgcc agtcgtaatc gcggtagatg ccgttttcat
    40441 catcccagag gtaacgcttt accgcatcgc gacgggcact ggccttctgg cggaacagtg
    40501 cttctgtctc tttctcgcct ttcagcgccg agatgttggc gatggcgctc tccagtttaa
    40561 acaggaaggc attcagatcg atggggatga actgggtggt acgaatactc gccagacgac
    40621 cagtatcacg cagccaacgg gaagagtaat cccaaccgga ggccgccccc gctcgtaaat
    40681 cgcggtacac ctcgttgggc gggcgaccag aatgtttcgc ggtttcaacg tcctcaagcc
    40741 aggattcgtc acgcggcgtg tcgcgatcgt cccagtaacg gttgagcagc gatccgtccg
    40801 gcatccgcac aacatggcga taggcctgat tagggatcaa cgattctgca ccgtccatcc
    40861 agaaggcata ttccattttc aggtggtcga gatagcggcg cgcaccgcgt acaccatctt
    40921 cttcaaacaa ctccaccatc agcgcaaaaa ccggtggttg cgagcggctc aaataatagg
    40981 tgcggttgcc gttggggatg tgaccgtagt tttcgatcat ccaggcgaag ttatcggcca
    41041 tgcatttcag caaatcttcc cgaccacttt ccgccagccc cagcatggtg aaataggaat
    41101 cccaatagta ggtttcgcta aaacggccgc ccgggacaat atatgactgc ggtagcgcca
    41161 gcagagaaga ccacggaatg tgatcctgtg gttcgcgggt tagcaccggc cacagctggt
    41221 cgatatgctc tttcagggaa ttttgcgggt ccgatacata ctcgctggag tagacctccg
    41281 gcagccagaa gtgattttca acaaacttgc gcaagtcaaa atcacgatga cggcgcactt
    41341 tacggtagcg gattaaaata tccagcgggt ccattttggg tgcgcagtcg ggaaaggttt
    41401 tactgtcggg gaaaattttc gccgactgaa catgctcgaa cagttcgaga tagcgatcgg
    41461 caggcgtcag cgcatcagag gcgggcagcc cttcaatcat ctcgggttcc ggttctgcct
    41521 cgatcatctc atccagtttt aattcatacg ggtccagttc atagcagaga tcgacttcga
    41581 tcatcagttc gtctggatta gggttttgaa ttttctgatt gagcataagg atccaacctc
    41641 cgaaattcgt cgctaattat cggcttttct ttaagggtag tcattcgctc cgcctggtgg
    41701 gcgacaaagc gtgcggtgga tcacgtttat taacttgtca aaaaatataa cgcactaata
    41761 tcaatggaat ttataaaaat acggatttgg tgttgttttt cattttcaaa acattcaatc
    41821 ctgctctcgc cgcaatcatg atatgccatt cctgatctgg gtaataggca caggctatct
    41881 tattgatagt ttatattcat gtaattgatt gattcctatc aaaaagcgta tctccctgtt
    41941 ttttatgatg gctttgtctc gcagagacgt ttgcagcatt ctggaaaatt ttctgggtca
    42001 caataactca ccaccgtgag ggaagaataa tgaaaatggt ctcacgtatt accgcgatcg
    42061 gcctggctgg cgtcgcgatt tgctatttag ggttatctgg ttatgtgtgg taccacgata
    42121 ataaacgcag taaacaggcc gatgttcagg catctgctgt cagtgaaaat aataaggttt
    42181 taggctttct ccgcgaaaaa ggatgcgact attgccacac gccttcggca gaattacccg
    42241 cctattatta tattcctggc gcgaaacagt tgatggatta cgacattaag cttggatata
    42301 aatcttttaa cctcgaggcc gtgcgtgcgg cactgctggc tgataaaccc gtttcgcaaa
    42361 gcgatctgaa taagattgaa tgggtgatgc agtatgaaac tatgccacca acgcgttata
    42421 ccgcgctaca ctgggcgggt aaggtgagtg atgaagagcg ggcggaaata ctggcctgga
    42481 ttgcaaaaca gcgcgcggaa tattacgcca gcaatgatac tgctccggag catcgcaatg
    42541 aaccggtgca gcccatcccg caaaaactgc ctaccgatgc gcaaaaagtg gcgttgggct
    42601 ttgcgctgta tcacgatccc cgtttatcgg ctgatagcac catttcatgc gctcattgcc
    42661 atgcgttgaa tgcggggggc gtcgatggca gaaaaacatc gattggtgtt ggtggcgcag
    42721 ttgggccgat taacgcgccg acggtattta actcagtatt taacgttgag cagttctggg
    42781 atggtcgtgc ggcaacattg caggatcagg caggtggacc gccgttgaac ccgattgaaa
    42841 tggcgtcgaa atcctgggac gaaattattg ctaagctgga aaaagatccg cagcttaaag
    42901 cgcagttcct cgaagtttat ccgcaaggtt tcagtggcga aaatattact gatgccattg
    42961 ctgaatttga gaaaacatta attacgccgg attccccatt tgataaatgg ttgcgtggag
    43021 atgaaaatgc gctgacggcg caacagaaaa aaggctatca attatttaaa gataataaat
    43081 gtgcaacttg tcatggtggt attattctcg gcggacgttc ctttgaaccg ttggggctga
    43141 aaaaagactt taactttggg gaaattacgg cggcggatat tggtcgtatg aatgtgacta
    43201 aagaagagcg tgataaattg cgccagaaag tacccggttt acgtaacgtt gctttaacgg
    43261 caccgtactt ccatcgcggt gacgtgccga cgctggacgg ggcggtgaaa ctgatgctgc
    43321 gctatcaggt aggcaaagag ctgccgcagg aggatgtgga tgatatcgta gctttcctgc
    43381 acagtctgaa cggggtgtac acgccgtata tgcaggataa acaataacta atttgatcgc
    43441 ccgaacagga atgtttgggc gatttttatt acgataataa agtctgtttt taatattatc
    43501 atgttaaatg tttatattat aaaaagtcgt ttttctgctt aggattttgt tatttaaatt
    43561 aagcctgtaa tgccttgctt ccattgcgga taaatcctac ttttttattg ccttcaaata
    43621 aatttaagga gttcgaaatg gaccagaagc tgttaacgga tttccgctca gaactactcg
    43681 attcacgttt tggcgcaaag gccatttcta ctatcgcgga gtcaaaacga tttccgctgc
    43741 acgaaatgcg cgatgatgtc gcatttcaga ttatcaatga tgaattatat cttgatggca
    43801 acgctcgtca gaacctggcc actttctgcc agacctggga cgacgaaaac gtccataaat
    43861 tgatggattt gtcgatcaa
//
LOCUS       DAJVUK010000010        43227 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.010, whole genome shotgun sequence.
ACCESSION   DAJVUK010000010 DAJVUK010000000
VERSION     DAJVUK010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 43227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43227
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.010"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..255
                     /locus_tag="OQQ57_000593"
     CDS             <1..255
                     /locus_tag="OQQ57_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HCS1955462.1"
                     /translation="IRGEVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQR
                     YFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK"
     gene            complement(305..1561)
                     /gene="nupG"
                     /locus_tag="OQQ57_000594"
     CDS             complement(305..1561)
                     /gene="nupG"
                     /locus_tag="OQQ57_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupG"
                     /protein_id="HCS1955463.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="OQQ57_000595"
     CDS             complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="OQQ57_000595"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HCS1955464.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLQSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(2907..3182)
                     /locus_tag="OQQ57_000596"
     CDS             complement(2907..3182)
                     /locus_tag="OQQ57_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HCS1955465.1"
                     /translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="OQQ57_000597"
     CDS             complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="OQQ57_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HCS1955466.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            4423..5142
                     /gene="trmB"
                     /locus_tag="OQQ57_000598"
     CDS             4423..5142
                     /gene="trmB"
                     /locus_tag="OQQ57_000598"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HCS1955467.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLNNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            5142..5468
                     /locus_tag="OQQ57_000599"
     CDS             5142..5468
                     /locus_tag="OQQ57_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HCS1955468.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            5652..6371
                     /locus_tag="OQQ57_000600"
     CDS             5652..6371
                     /locus_tag="OQQ57_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HCS1955469.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            6547..7593
                     /gene="ansB"
                     /locus_tag="OQQ57_000601"
     CDS             6547..7593
                     /gene="ansB"
                     /locus_tag="OQQ57_000601"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HCS1955470.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            7710..8717
                     /locus_tag="OQQ57_000602"
     CDS             7710..8717
                     /locus_tag="OQQ57_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HCS1955471.1"
                     /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
                     LTSKGTPASGWSVNFYSFQSAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI
                     K"
     gene            complement(8872..10008)
                     /gene="hemW"
                     /locus_tag="OQQ57_000603"
     CDS             complement(8872..10008)
                     /gene="hemW"
                     /locus_tag="OQQ57_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HCS1955472.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
     gene            complement(10001..10594)
                     /locus_tag="OQQ57_000604"
     CDS             complement(10001..10594)
                     /locus_tag="OQQ57_000604"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HCS1955473.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(10602..10892)
                     /locus_tag="OQQ57_000605"
     CDS             complement(10602..10892)
                     /locus_tag="OQQ57_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HCS1955474.1"
                     /translation="MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(10889..11455)
                     /gene="yggT"
                     /locus_tag="OQQ57_000606"
     CDS             complement(10889..11455)
                     /gene="yggT"
                     /locus_tag="OQQ57_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HCS1955475.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNILLPGMWMAL"
     gene            complement(11473..12177)
                     /gene="yggS"
                     /locus_tag="OQQ57_000607"
     CDS             complement(11473..12177)
                     /gene="yggS"
                     /locus_tag="OQQ57_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HCS1955476.1"
                     /translation="MNDIAHNLAQVRDKILAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            12195..13175
                     /locus_tag="OQQ57_000608"
     CDS             12195..13175
                     /locus_tag="OQQ57_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HCS1955477.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDALDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ
                     LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQRVGEGRL"
     gene            complement(13351..13767)
                     /gene="ruvX"
                     /locus_tag="OQQ57_000609"
     CDS             complement(13351..13767)
                     /gene="ruvX"
                     /locus_tag="OQQ57_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HCS1955478.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(13767..14330)
                     /locus_tag="OQQ57_000610"
     CDS             complement(13767..14330)
                     /locus_tag="OQQ57_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HCS1955479.1"
                     /translation="MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLE
                     NLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDN
                     TVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTASADLNILFKT
                     PIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(14439..15389)
                     /gene="gshB"
                     /locus_tag="OQQ57_000611"
     CDS             complement(14439..15389)
                     /gene="gshB"
                     /locus_tag="OQQ57_000611"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HCS1955480.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVLLMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(15402..16133)
                     /gene="rsmE"
                     /locus_tag="OQQ57_000612"
     CDS             complement(15402..16133)
                     /gene="rsmE"
                     /locus_tag="OQQ57_000612"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014226833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HCS1955481.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(16213..16920)
                     /gene="endA"
                     /locus_tag="OQQ57_000613"
     CDS             complement(16213..16920)
                     /gene="endA"
                     /locus_tag="OQQ57_000613"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HCS1955482.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(17015..17512)
                     /locus_tag="OQQ57_000614"
     CDS             complement(17015..17512)
                     /locus_tag="OQQ57_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HCS1955483.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(17589..18983)
                     /gene="galP"
                     /locus_tag="OQQ57_000615"
     CDS             complement(17589..18983)
                     /gene="galP"
                     /locus_tag="OQQ57_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/proton symporter"
                     /protein_id="HCS1955484.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
     gene            complement(19419..20573)
                     /gene="metK"
                     /locus_tag="OQQ57_000616"
     CDS             complement(19419..20573)
                     /gene="metK"
                     /locus_tag="OQQ57_000616"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HCS1955485.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
     gene            complement(20877..21092)
                     /locus_tag="OQQ57_000617"
     CDS             complement(20877..21092)
                     /locus_tag="OQQ57_000617"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955486.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            21228..21359
                     /gene="yqgB"
                     /locus_tag="OQQ57_000618"
     CDS             21228..21359
                     /gene="yqgB"
                     /locus_tag="OQQ57_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HCS1955487.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            21368..23344
                     /gene="speA"
                     /locus_tag="OQQ57_000619"
     CDS             21368..23344
                     /gene="speA"
                     /locus_tag="OQQ57_000619"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HCS1955488.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            23481..24401
                     /gene="speB"
                     /locus_tag="OQQ57_000620"
     CDS             23481..24401
                     /gene="speB"
                     /locus_tag="OQQ57_000620"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HCS1955489.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(24607..25365)
                     /gene="loiP"
                     /locus_tag="OQQ57_000621"
                     /gene_synonym="yggG"
     CDS             complement(24607..25365)
                     /gene="loiP"
                     /locus_tag="OQQ57_000621"
                     /gene_synonym="yggG"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease LoiP"
                     /protein_id="HCS1955490.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            25635..27626
                     /gene="tkt"
                     /locus_tag="OQQ57_000622"
     CDS             25635..27626
                     /gene="tkt"
                     /locus_tag="OQQ57_000622"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCS1955491.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIIGMTTFGESAPAELLFEEFGFTVNNVVAKAKELL"
     gene            27940..28383
                     /gene="cmtB"
                     /locus_tag="OQQ57_000623"
     CDS             27940..28383
                     /gene="cmtB"
                     /locus_tag="OQQ57_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001239649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HCS1955492.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISHR"
     gene            28411..29799
                     /gene="cmtA"
                     /locus_tag="OQQ57_000624"
     CDS             28411..29799
                     /gene="cmtA"
                     /locus_tag="OQQ57_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HCS1955493.1"
                     /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL
                     PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM
                     IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT
                     FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV
                     ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA
                     GGMSGTWMFNLLDGGLVAGPSLGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI
                     LKMEKTVETESEDEFAQSTNAVKAMKQEGAFSLSRVKRIAFVCDTGMGSSAMGATTFR
                     KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD
                     TLFNQLTAEHKH"
     gene            29814..31091
                     /locus_tag="OQQ57_000625"
     CDS             29814..31091
                     /locus_tag="OQQ57_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HCS1955494.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLVEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVDLAASKGIELVYVNTKGMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPDTVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGIDIGEAAQ"
     gene            31088..32053
                     /gene="yggF"
                     /locus_tag="OQQ57_000626"
     CDS             31088..32053
                     /gene="yggF"
                     /locus_tag="OQQ57_000626"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HCS1955495.1"
                     /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN
                     DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV
                     MAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT
                     LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC
                     AVKALGGDMQAELIDFCQAKGDYTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGND
                     ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH"
     gene            32075..32584
                     /gene="fumE"
                     /locus_tag="OQQ57_000627"
     CDS             32075..32584
                     /gene="fumE"
                     /locus_tag="OQQ57_000627"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
                     /protein_id="HCS1955496.1"
                     /translation="MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
                     NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQD
                     ETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
                     TTILKELTP"
     gene            32581..33294
                     /locus_tag="OQQ57_000628"
     CDS             32581..33294
                     /locus_tag="OQQ57_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HCS1955497.1"
                     /translation="MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(33266..33943)
                     /locus_tag="OQQ57_000629"
     CDS             complement(33266..33943)
                     /locus_tag="OQQ57_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708691.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HCS1955498.1"
                     /translation="MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHSAQRRMVAVACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVN
                     PPDDIHP"
     gene            complement(33937..34614)
                     /locus_tag="OQQ57_000630"
     CDS             complement(33937..34614)
                     /locus_tag="OQQ57_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HCS1955499.1"
                     /translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
                     AQLMAGWYPDFLPGEITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQ
                     PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
                     GALQPLC"
     gene            complement(34602..35309)
                     /locus_tag="OQQ57_000631"
     CDS             complement(34602..35309)
                     /locus_tag="OQQ57_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HCS1955500.1"
                     /translation="MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILVIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            complement(35310..35888)
                     /locus_tag="OQQ57_000632"
     CDS             complement(35310..35888)
                     /locus_tag="OQQ57_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HCS1955501.1"
                     /translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            complement(35911..36342)
                     /locus_tag="OQQ57_000633"
     CDS             complement(35911..36342)
                     /locus_tag="OQQ57_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1955502.1"
                     /translation="MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIA
                     GCTGSLTDVALRYARQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
     gene            36714..37733
                     /gene="epd"
                     /locus_tag="OQQ57_000634"
     CDS             36714..37733
                     /gene="epd"
                     /locus_tag="OQQ57_000634"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HCS1955503.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            37783..38946
                     /gene="pgk"
                     /locus_tag="OQQ57_000635"
     CDS             37783..38946
                     /gene="pgk"
                     /locus_tag="OQQ57_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HCS1955504.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            39161..40240
                     /gene="fbaA"
                     /locus_tag="OQQ57_000636"
     CDS             39161..40240
                     /gene="fbaA"
                     /locus_tag="OQQ57_000636"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HCS1955505.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLSFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            40598..41458
                     /gene="mscS"
                     /locus_tag="OQQ57_000637"
     CDS             40598..41458
                     /gene="mscS"
                     /locus_tag="OQQ57_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HCS1955506.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
     gene            41597..42232
                     /gene="argO"
                     /locus_tag="OQQ57_000638"
     CDS             41597..42232
                     /gene="argO"
                     /locus_tag="OQQ57_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HCS1955507.1"
                     /translation="MFSYYFQGLDLGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCA
                     ISDLVLICAGIFGGSALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSSNIELASAE
                     VLKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWF
                     FGLAILAAWLAPRLRTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
     gene            42325..43065
                     /locus_tag="OQQ57_000639"
     CDS             42325..43065
                     /locus_tag="OQQ57_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HCS1955508.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDVVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
BASE COUNT        10569 a        10783 c        11523 g        10352 t
ORIGIN      
        1 attcgcggtg aagtggagtt ggtgcggatt cgtgatgccg aagggcgaat tgcggcagaa
       61 ggggcgttgc cttatccacc tggcgtgctt tgcgtggtac ccggggaagt ctggggtggg
      121 gcggttcaac gttatttcct tgcactggaa gaaggggtaa atttgttgcc gggattttcg
      181 ccggagctgc aaggtgttta tagcgaaacc gatgcggatg gcatgaaacg gttgtacggt
      241 tatgtgttga agtaagaata aaaaaaacgg gtcaccttct ggcgacccgt ttttctttgc
      301 gtaattagtg gctaaccgtc tgtgtgcctg tcgggacacg aacgtgttta tatttgaaca
      361 tcgccatgaa cgcgaaggcc agaaccacgg agtaaccagc gaaaatcaac catacggtct
      421 gccagtcggt aatgccgttt tgggtgtaca tctcaacaac tttaccgctc acgatgccgc
      481 cgaggataca gccgaagccg ttagtcatca tcaggaacat cccttgtgca ctggcgcgaa
      541 ttgccgggct aacttctttt tcgacaaaca ccgaaccaga gatgttgaag aagtcgaatg
      601 cgcaaccgta aacgatcatc gacagtacca gcagtacagt accgaacgga gtcgggtcgc
      661 cgtaagcaaa cagcgcaaaa cgcaggatcc acgccacaat actgatcatc attacgttct
      721 taataccgta gcggcttaag aagaacggga tggtcagaat gaacagggtt tcagagatct
      781 gcgaaatcga catgatgatt gacgcatgct gcacaataaa gctgctggca aacatcggat
      841 ctttgtcgaa gctgtgcagg aaggtattac cgaacatgtt ggtaatctgc agttccgcgc
      901 ccagcagcat tgagaagata aagaagattg ccatacgctt gtttttaaac agcgcgaatg
      961 catcgaggcc cagcagggtt gtccagctct gattcgcttg ctgtttagca accggaatat
     1021 gcggcagagt cagggtaaac agaaccagaa tggcggaaag tgctgcgcca atatacagct
     1081 gcatgtggct taattcgaag ccagacaggc tcaccaccca cattgccatg ataaagccga
     1141 tggtgcccca gatacggatt ggcgggaagt cagtaacgat atccatcccg gcattttgca
     1201 ggcgatagta agagatggtg ttgattaacc caagcgttgg catataagca aacgagttaa
     1261 tcaatatcac aaggaacatc gcctccggtg tcgtgacctg tgccgccatg aacagcgtga
     1321 tagcgccaat ggtgtggcaa atggcatata cccatttcgc acttaaccat ttgtcggcca
     1381 caatccccag cagcgcaggc ataaagaccg ctgcgatacc cagtgagcta taaactgcgc
     1441 caatagaagc accgtcaaac ttcagggtaa caaacatata ggagccgagg gtcgtcagcc
     1501 aacttcccca cagacagaac tgcagaaaag agaggatttt cagctgcagc ttaagattca
     1561 tgttaatttc ctcacatcgt gatgcggatg agtgtttgaa aaagcacatt tgaccgtgcg
     1621 agatgatggg attctatcaa cttcgcggac tggttttttg ttacctgtgg caaataattg
     1681 caaacattcc caatttgcaa aacgaaattg tgatgtggat aacatttttg cccctgagca
     1741 tcgtcagggg cggttaatgg aattatcggc ggcggtagga tttttgcgcg gtattcactt
     1801 tataaagata acggcgagat tccgcagagg gatggcgggt cgtcagcgtc tgataaacat
     1861 cgcccggcgt catggtgtta ataatattgg cagcctgaat cttatcattc gaaaagactc
     1921 gcagcacgct gcctgcgccg ccgttatagg cggtgatgac ggcataacgc cgcgatgttg
     1981 ggttatcaat tccgccgaga taaacattgt tcagcatcgc cagatacgcg gtgccggtat
     2041 caatattgct ggcaggatca aacaagaaac tgcggctcgg cgtgccggat ttcccctgcg
     2101 agcggaacac atctttcccg gcagtatgtt gtaccacctg cattaatccc agcgcatcgg
     2161 aacggctgac cgcatacggg ttaaaggaag attcggtctg cataattgcc agaatcagcg
     2221 actcatcaac gccatatttc cgtgacgcct ggcggaccat gccgagatat ttgtgcgcac
     2281 gtttatcaag gtggttcggt accatgttaa tggtgacgct gtagatgata cgcagcccgt
     2341 tactgcggct ttgcagacgg tttttcagca gataatccgc gaagttgctt gcgcgacctt
     2401 cccagcgaat cggctgcccg gtgttgtcca ccacctgacc gtaaaggaaa ggttctttcg
     2461 aaatcgtaat atcatcaacg tcggaataga gatcgaccga actcggatcg tcacccatca
     2521 gcaacgtttt gataattgcc cggcgcaaat gcgcggcagg ttctgtcccg gcgatagttt
     2581 cgatagtaat cgtaccgtca tcgaagttga tgtggctgcg ggtctgatat tgatcggtgt
     2641 atttcacgta gtccttagga ccggcgatca ccacctcttt gaatccccag atgttctcaa
     2701 tattgtgggc aaattgcccc atcagaatat caaaaccgtt ggtatctttg acccaggctt
     2761 cgttataggt atcgcctttt ttggtcgtcg aacaggagat gagcaacggc gcaatcaaag
     2821 ccagcgcgag atattttttc atcattccgg gtgcgtgttg tgtttgtttt tatgcaagtt
     2881 gccggaggcg tgctccggca ctgtttttat tttttatctt ccggcgtata gccctcgata
     2941 tgcacctctt taccctcgaa caggaagttg accatctcct gctcaagcag cttgcggtgc
     3001 tcggcattca tcatgttgag tttcttttca ttaatcagca tggtttgctt gtgctgccac
     3061 tgcgcccagg cttctttgga gatctcgtta tagatgcgtt ttcccagctc gccggggtac
     3121 agctgaaaat cctgaccttc tgcttcacgt tgcaggaaag tacaaaaaat cgttctgctc
     3181 ataaatcatc ctctttatcg actcacgcgc taaaccggcg cgccagtgcg taactgctgt
     3241 aacaaacgct ccacgggagc cgccaggcca actgacggcg gttgcgctaa gttataccag
     3301 agcgcattgc cttcatccat gcagccggtg aatgacgaca cgggaagcca cataggcaca
     3361 atatctaagt ggaaatggct gaaggtatgc cgaaacgcgg tcagttgcgt caggttatcg
     3421 gcagcaatct gccgttgcgc cagccactgc cgcaaacttt cttcgtcggc aaactgcggg
     3481 aaacagtata aaccgcccca caatccgctc ggcggacgct gcgccagcaa tacttcatct
     3541 tcgtgctgta acagcaaaaa gtagccggtg cgctccggca gcgtctgttt cggttttttg
     3601 cccggataaa gcgaccagct attattggcg gcggcaatac atccgttttg tagcggacag
     3661 agcgaacatt tcggcttcga gcgcgtacaa atcatcgcgc ccaaatccat catcgcctga
     3721 ttaaaccgtt ccacgccgac cgcgggcgtc acctgctcgc tcaaactcca taatttattc
     3781 tcgacctctt ttttcccagg ccagccgctt acagcatagc agcgcgccag cacgcgtttg
     3841 acgttaccgt cgagaatcgg aaagtgctta cccagagaaa gcgagagaat cgcgcctgcg
     3901 gtggaacgcc cgacgcccgg taacgccgcg acttcttcaa aggtttccgg gaatttaccg
     3961 ccgtgtaagg tcgccacttg ttgtgccgct ttatgcagat tgcgcgcgcg ggcgtaatag
     4021 ccaagcccgg tccacaagtg gagaacttcg tcgagcggcg cattggcgag atcggtcacc
     4081 gtcgggaagc gcgccataaa gcgttcaaaa taggggataa cggtcgcaac ctgagtttgt
     4141 tgcaacatca cttctgagag ccatactttg tagggcgtct tgtcaatttg ccagggcagc
     4201 gtttttcgcc cgtatttatc gtaccagtcc agaacctggg ctgaaaattg cgacgcttgc
     4261 atggtcaccg aattcactgt tgttgggggc aagattgcag cacagcgacg gcagggtgta
     4321 aaccggaact ttccgcagcc acggccttat catgcttgca tccggcaact aactttggat
     4381 aatgcccgtt ttcagaacac tttcacaagc gactaaatct ttatgaaaaa cgacgtcatt
     4441 tcaccggaat ttgatgaaaa cggccgccca ctgcgccgta tccgtagttt tgtgcgccgc
     4501 caggggcgac tgaccaaagg ccaggaacat gcgctggaaa actactggcc ggtgatgggc
     4561 gttgagttca gcgaagatat gctggatttc cccgcgcttt ttggccgtga agcgccggtg
     4621 acgcttgaga ttggttttgg catgggggcg tcgctggtgg caatggctaa agatcgccct
     4681 gagcaggact tcctcggcat tgaagtgcat tcaccgggcg ttggtgcgtg cctggcttct
     4741 gcgcatgaag aaggtttaaa caacctgcga gtgatgtgtc acgatgcggt tgaagtgctg
     4801 cataaaatga ttcctgacaa ttcattgcgc atggtgcagc tctttttccc tgacccgtgg
     4861 cacaaagcgc gccataataa acgccgtatc gtacaggtgc cgtttgccga actggtaaaa
     4921 agcaaactgc agctgggggg cgtattccat atggcgaccg actgggaacc ttatgcggaa
     4981 catatgcttg aagtgatgtc ttctattgac ggttataaaa acctgtcaga gagcaatgat
     5041 tacgtaccgc gtccggcatc acgtccggtg acgaaatttg aacaacgtgg tcatcgtctt
     5101 ggtcacggag tatgggactt aatgttcgag agggtgaaat aatggcaaag aaccgtagcc
     5161 gtcgtctgcg taaaaaaatg cacatcgacg aattccagga attaggattt tcggtggcat
     5221 ggcgattccc ggaaggtaca tcggaagaac agattgataa aaccgttgat gattttatta
     5281 acgaggttat cgaaccgaac aaactggcct ttgacggcag cggttatctg gcctgggaag
     5341 gtctgatctg catgcaggaa atcggcaaat gcaccgaaga acatcaggcg attgtgcgta
     5401 agtggctgga agagcgcaaa ctggatgagg tacgcaccag cgaacttttc gacgtttggt
     5461 gggactaaga aagcatacgg gcgatgacaa atgcaaaact gcctgatgcg ctacgcttat
     5521 caggcctgga aagatgcacg atcgagtagg cgggataagg tgtttacgcc gcatccggca
     5581 tggaaaacgc gtactttgtt atcaatctgg ggccagcaaa tgctggcctg attttttctt
     5641 gagggaagac tatgatgcgc aaaatgctgc tggcggcagc actttcagtg acggcaatga
     5701 ccgctcacgc cgactaccag tgcagcgtca cgccgcgtga cgatgtgatt gtcagcccgc
     5761 aaaccgtgca ggtgaagggc gaaaacggca atctggtgat cacgccagac ggcaacgtga
     5821 tgtataacgg taagcaatat tccctgaatg ccgcccagcg cgagcaggcg aaggattatc
     5881 aggctgaact acgcagcacg ctgccgtgga ttgatgaagg cgcgaaaagc cgcgtcgaaa
     5941 aagcccgtat tgcgctggat aaaattatcg ttcaggagat gggcgaaagc agcaaaatgc
     6001 gcagccgtct gaccaaactt gatgcgcaac tgaaagagca gatgaaccgc attatcgaaa
     6061 cgcgcagcga tggcctgacg tttcactata aagccattga tcaggttcgc gccgaaggcc
     6121 agcaattagt gaatcaggca atgggtggaa ttttacagga cagcattaat gaaatgggcg
     6181 cgaaagcggt gctgaaaagc ggcggtaacc cattacagaa tgtgctggga agcctggggg
     6241 ggctgcaatc ctcaatccaa accgagtgga aaaagcagga aaaagatttc cagcagtttg
     6301 gcaaagatgt ttgtagccgc gttgtgactc tggaagatag ccgcaaagcc ctggtcggga
     6361 atttaaaata atcctctatt ttaagacggc ataatacttt tttatgccgt ttaattcttc
     6421 gttttgttac ctgcctctaa ctttgtagag ctccaaaata tattcacgtt gtaaattgtt
     6481 taacgtcaaa tttcccatac agagctaagg gataatgcgt agcgttcacg taactggagg
     6541 aatgaaatgg agtttttcaa aaagacggca cttgccgcac tggttatggg ttttagtggt
     6601 gcagcattgg cattacccaa tatcaccatt ttagcaaccg gcgggaccat tgccggtggt
     6661 ggtgactccg caaccaaatc taactacaca gcgggtaaag ttggcgtaga aaatctggtt
     6721 aatgcggtgc cgcaactaaa agacattgcg aacgttaaag gcgagcaggt agtgaatatc
     6781 ggctcccagg acatgaacga taatgtctgg ctgacactgg cgaaaaaaat taacaccgac
     6841 tgcgataaaa ccgacggctt cgtcattacc cacggtaccg acacgatgga agaaaccgct
     6901 tacttcctcg acctgacggt gaaatgcgac aaaccggtgg tgatggtcgg cgcaatgcgc
     6961 ccgtccacgt ccatgagcgc agacggtcca ttcaacctgt ataacgcggt agtgaccgca
     7021 gctgataaag catccgctaa tcgtggcgtg ctggtggtga tgaacgacac cgtactggac
     7081 ggtcgcgatg taaccaaaac caacaccacc gacgtagcga ccttcaagtc tgttaactac
     7141 ggtcctctgg gatacattca caacggtaag attgactacc aacgtacccc ggcacgtaag
     7201 cacaccagcg atacgccatt cgatgtctct aagctgaatg agctgccgaa agtcggcatc
     7261 gtttataact acgctaacgc atccgatctt ccggctaaag cactggtaga tgcgggctat
     7321 gatggcatcg ttagcgctgg tgtgggtaat ggtaacctgt ataaatccgt gttcgacacc
     7381 ctggcaaccg ccgcgaaaaa cggcactgca gtagtgcgtt cttcccgcgt accgacgggt
     7441 gctaccactc aggatgctga agtggatgat gcgaaatacg gcttcgtcgc ctctggcacg
     7501 ctgaacccgc aaaaagcgcg cgtcctgctg cagctggctc tgacgcaaac caaagatccg
     7561 cagcagatcc agcagatctt caatcagtac taatcacctc gctccggtat cgtgccgggg
     7621 ctttttcact tcagacttac gtccattgcc aattttcatt accctaatga taatcaccgg
     7681 aataaattat ttcgcgtgag gtttttcggg tgaaaaagca atggattgtt ggcacggcac
     7741 tgcttatgtt gatgactggt aatgcctggg cagatggcga accgccaact gaaaatatct
     7801 taaaagatca attcaaaaag cagtatcacg gcattctcaa gcttgatgct atcaccttaa
     7861 aaaatcttga tgctaagggt aatcaggcca cctggtcagc ggaaggcgat gtctcttcca
     7921 gtgacgatct ctatacctgg gtcggtcagt tggcagatta cgaactgctc gaacagacct
     7981 ggacgaaaga taaaccggta aaattctcgg cgatgttaac cagtaaagga acgcccgcgt
     8041 ctggctggtc ggtgaacttt tactcttttc agtcggcagc cagcgatcgt gggcgggtgg
     8101 tcgacgatat caaaacgaat aataaatatc tgatcgtgaa tagcgaagat ttcaattatc
     8161 gctttagtca gcttgaatct gcgttgaata cccagaagaa ctcgattcct gcgctggaaa
     8221 aggaagtgaa agcgcttgat aagcaaatgg tggcggcgca gaaagcagcg gatgcatatt
     8281 ggggaaaaga tgcaaacggt aagcaaatga cccgcgaaga agcctttaaa aaaattcacc
     8341 aacagcgtga tgagtttaat aaacagaacg atagcgaggc gttcgcggtt aaatatgaca
     8401 aagaggttta tcaaccggcg attgcggcat gtcataaaca gagtgaagag tgttatgaag
     8461 tgccgattca gcagaaacga gatttcgata tcaacgaaca acggcgacag acttttctgc
     8521 aatcacaaaa actcagccgt aaattgcagg atgactgggt aacgctcgaa aaagggcaat
     8581 atccgttaac gatgaaagtt tcagaaataa acagtaaaaa agtcgcgatt ttgatgaaaa
     8641 ttgacgatat caaccaagct aatgaacgct ggaaaaaaga taccgaacaa ctgcggcgca
     8701 atggggtgat taagtaagtt tgatatagtg cacgatttgt agcaggatgc ggcgttgacc
     8761 ccgcatccgg caatcaacgt ctgatgcgac gcttgcgcgt cttatcagac ctacaaccgt
     8821 tgccacatgt aggctggata aggcgttcac gccgcatccg gcaatacaag tttactcagc
     8881 cagaaaaagc tccagcagcg aatttaaaaa cagcttccca tgttccgtta tctgccagta
     8941 atccgcacat tctgtgagat aaccctgggc aatcgcctcg tctaactgtg ggcgaatcac
     9001 atcttcgcaa agcccggtat acgcactaaa ctctgcgcgt ggcgcggcct ccagcaagcg
     9061 aaagcggttc ataaagaact caaacggctt atctgcggct tcgacatcac gctggctttc
     9121 cagatacctt ccttgcataa aaccacgagg atgacgcgtt ttagtggtac gcagaatgcg
     9181 cccatccggg aaggtgactt tgccgtgcgc gccgcagcca ataccgatgt agtcaccaaa
     9241 tcgccagtag ttgagattgt gctggcactg ataaccgggt ttggcgtaag cggaagtttc
     9301 atattgctga taacccgctg cggttaataa ctgatgcccc tgttcgaaaa tatcccacag
     9361 cgcgtcatcg tccggcagca ccggtggtcg cgaaccaaac agcgtattgg gttcgatggt
     9421 cagttgatac caggaaagat gcggcggatt cagttcaatg gcctggcgta gatcgccaag
     9481 cgcctcttcc agtgattgat ccggtagtcc atgcatcaaa tcaaggttaa agctacgtaa
     9541 ccctaaaccg ctcgccagct ttgccgctcg tttcgcttct tgcgggccat gaatgcgccc
     9601 aagtcgtttc agcttttctt cgctaaaact ctgcacacca atagagatgc ggttcacacc
     9661 agcacgctga taatcgacaa agcgatcggc ttctaccgta ccagggttcg cttccatagt
     9721 aatttctgca tccgctgcca gcggcaaacg cgcacgcacg ccgtccagca gcgtttgcat
     9781 cgccgggccg gaaagcaggc tcggcgtacc accgccaata aagattgtct ttacttcacg
     9841 gccctgagcg taagccacat cattgtccag atcgcaaagc agatgctgaa cataatcgtc
     9901 gtgcggcact tctcctttca acgcgtgaga gttgaaatcg cagtacgggc atttctgcac
     9961 gcaccacggg atgtgaatgt agagactcag cggcggtaat ttaaccatta cgtaaagcgt
    10021 ccagcagcag tttcaacgcc tgaccacggt gggaaatggc gctcttttct tcgcgggtca
    10081 gttcggcggc ggttttccct tcggaaggta cgaagaagat tggatcataa ccaaagccac
    10141 cagtgcccgc tggttcgcga gtaatcacgc ccggccagct gccgtggcat accagcggag
    10201 tcggatcttc cgcgtgacgc agatatacca gcacgcagtg gaaacgtgcc tgacgttggt
    10261 cgtccggtac gtctttcagt gtttccaaca gtttttgcag attcttttga tcggtcgcgt
    10321 cttcaccgga ataacgcgcg gagtaaatac ccggcgcgcc acccagcgca tctaccgcca
    10381 gaccagagtc gtcggcaatt gccggtaaac cggtcacttt tgccgcatgg cgcgctttca
    10441 gaatcgcgtt ttcgataaag gttaggccgg tttcttcagc ggaatcaacg ccgaggtctg
    10501 tttgtgccac gatatcaaga ccaaagtcgc taagcagcga cgccagctca cgcactttac
    10561 cggcattgcc ggttgcgagg acaacttttt gcataggata cctaattaat taacgccgcg
    10621 atttctggcg ggatttgttg cggattaatg attttaattt gtttgtggcg gccaagttcg
    10681 cctttttcaa tcaccacctg gcttttggca acccggaatt gcttaccgag aaacttcacc
    10741 agatgactgt tggcctggcc gtcaactggc ggcgcggtaa tggcgacttt aacttcgtcg
    10801 ccatgtaaac cgacaataga atcacggctg gctttcggct gaatatagag ccgtaaaacc
    10861 agaccgtcat cattaactgt tacggcattc ataacgccat ccacatcccc ggcagcagga
    10921 tgtttccggt tgcctgtaat acttctgcga cacccatatt gatgacatac agcagcagaa
    10981 cgaggatcat cggcgagaaa tcaatcccac ccattgccgg tagcaagcgg cgaatcgggc
    11041 gcagcagcgg atcggccagc tgaatcagca cgtattcaat cgggctacga ccctggctta
    11101 cccagctcat aatcgccatc accagcagga cccagaaaat cagcaagccg atggttttca
    11161 gcagaatcag taaaccggca atccagatga ttggcaggaa ggtcaccact ttaaacagca
    11221 caatggcttt gataaaactg agaatatagg caaccagcag cgaggcgctg tcaatgggac
    11281 ccattgccgg aataacgcgg cgcagtggcc cgataattgg ctgcgttacc ttcactacaa
    11341 actgtgagaa ggggttgtaa aaatcacaat gagcccactg catccagatg cgtaataaca
    11401 gcaccatggt atacagctca atgaccgttg aaagcaggaa agtcaacgta ttcatggcgt
    11461 tcctttaatt ccttattttt tagagtaatc acgcgcacca aaaattgcag tgccgatacg
    11521 aaccatcgtg ctacctgccg caatggcggc ttccatatcg tccgacattc ccagagagag
    11581 cgtgtcgata tgcgggtagc gcgttttcag tccggcaaat gctacagcca tttggcgtgc
    11641 aacttcaaac tgccttacat attctgactc aggcgcaggg attgccatca gcccgcgcag
    11701 acgtaaacgc ggtagttcag cgaccgccgc tgccagctcg tccagttctg ccagttgaat
    11761 cccggactta ctgttttcat cactaatatt aatttgaatc agtacgttaa gagggggaag
    11821 ttctgccggg cgctgatcgt tgaggcgggt agcaatgcgc aaacggtcga tggtatgaca
    11881 ccagtcgaaa tgctctgcca ccaggcggct tttattagac tgcaacgggc caataaaatg
    11941 ccattctaat cctgttacgc ccagttcctg aaagtggcga attttatcta ccccttcctg
    12001 aacgtagttt tcaccaaatt gacgctgccc ggcatcaatg gcttctgcga tggcgctcgc
    12061 aggttttgtt ttactgactg caagcagcgt aatttcttct ggagaacggc cgcaacgcgt
    12121 tgcagccgct aagattttgt cccggacctg tgccaggtta tgcgcaatat cgttcatttt
    12181 ccgaggatct tagtatgaat atggaagaaa ttgtggccct tagtgtaaag cataacgtct
    12241 cggatctaca cctgtgcagc gcctggcccg cacgatggcg cattcgcggg ctaatggaag
    12301 ctgcgccgtt tgatgcgctg gacgtcgaag agctactgcg ggagtggctg gatgacgatc
    12361 agcgggcaat attgctggaa aatggccagc tggattttgc cgtgtcgctg gcggaaaacc
    12421 agcgattgcg tggcagcgca ttcgcgcaac ggcatggcat ttcgctggcg ttacggctgt
    12481 taccttcgca ctgcccgcag ctcgaacagc ttggcgcacc aacggtattg ccggaattac
    12541 tcaagagcga gaatggcctg attctggtga cgggggcgac ggggagcggc aaatctacca
    12601 ccctggcggc gatggttggc tatctcaatc aacatgccga tgcgcatatt ctgacgctgg
    12661 aagatcctgt tgaatatatc tatgccagcc agcgatgttt gatccagcag cgggaaattg
    12721 gtttgcactg tatgacgttc gcatcgggat tgcgggccgc attgcgggaa gatcctgatg
    12781 tgattttgct cggagagctg cgtgacagcg agacaatccg tctggcactg acggcggcag
    12841 aaaccgggca tttggtgcta gcaacattac atacgcgtgg tgccgcgcag gcagttgagc
    12901 gactggtgga ttcatttccg gcgcaggaaa aagatcccgt acgtaatcaa ctggcaggta
    12961 gtttacgggc cgtgttgtca caaaagctgg aagtggataa acaggaagga cgcgtggcgc
    13021 tgtttgaatt attgattaac actcccgcgg tggggaattt gattcgcgaa gggaaaaccc
    13081 accagttacc gcatgttatt caaaccgggc agcaggtggg gatgataacg tttcagcaga
    13141 gttatcagca gcgggtgggg gaagggcgtt tgtgacgttg ccatgcccga tgcgcaagtt
    13201 tatagggcct ataaaggcaa taaatgtctg atgcgacgct aacgcgtctt atcagaccta
    13261 cagccgctgc cagatgtgtg ctggataagg cgttcacgcc gcatccggca agatggcggt
    13321 aacgactatc cgccaggctt ttagatcgcc ttaatatccc tgctcgaaat agctttcgag
    13381 aataataacc gcagaggcag agtcgacttt gcctttgttg agcgcccgat agccgccctg
    13441 ttcaaacaga ccggaacggg cttccacggt gctaagacgt tcgtcatgga gctttacttc
    13501 aacaccgaaa cgaccatgaa tacggttggc aaatttacgc gctctggcag tcaatggttg
    13561 ctcggtgccg tccatattca gcggcaaacc gacgatgatt tcgtccggct gccactcttt
    13621 cagtaaacgt tcgatgaggt tccagtccgg cgtaccgtcc tgtgctttaa ttgcaggcaa
    13681 agggcgagca gtgccggtaa tgcgttggcc gaccgctacg ccaatgcttt tggtgccgaa
    13741 gtcgaaggcg agtaaggttc cactcatcag gcgtgccctg ccacaccagg catggtgaga
    13801 atatccacac caatcagttt tgccgcctcg cgccagcggt cggcaatcgg cgttttgaac
    13861 agaatattca gatccgccga ggccgttagc cacgcgttat cgagaatttc ttgttccagt
    13921 tgaccttttt cccaggaggc atagcccaga gccaccaata cgtcagacgg ttgtttatcg
    13981 gtgccgagcg tttccagcac atcgcgggaa gtggtcatca ccgtgttgtc tgaaatgcga
    14041 atgctggaag caaaattgga gggcggagta tgcaaaataa acccgcgatc ttcagccagt
    14101 gggccgccga gcataaccgg tttatccaga cggattgatt catcacgcgg ctccggcgtg
    14161 atcttcagct tttccagaat cccttcaatt ttgagatttt ccagcggctt gttgacgatg
    14221 atccccattg caccattggt attatgttcg caaatgtaga ccacggaacg acggaaaatc
    14281 ggatcctgga gagcaggcat ggcaataaga aagtgatgct gtaaattcat tgtcagaggt
    14341 tctgtttcct ggttcaaaaa agcaacagcg cccagtatgc gtggaaagaa gggcgctgtc
    14401 actcagagtc tcaacgagat ccttctcgct aaggtgggtt actgctgctg taaacgtgct
    14461 tcgatggcat ccattaacat tccggtgatc gacaccggaa actctgcttc aatctcacga
    14521 atacaggttg ggctggtgac gttaatttca gtcagacggt cgccgatgat atccagacca
    14581 acaaaaatca gccctttttc tttcagcgtc ggcccgatct gacgggcgat tttccagtca
    14641 ctttccgtca gcggccgagg ttcaccgcga ccaccggcag ccagattgcc acgggtttcg
    14701 cccccctgcg gaatacgcgc caggcagtac ggtaccggct cgccatccac caccagcacg
    14761 cgtttgtcgc catctttaat ggctggcagg taattttgcg ccatgcagta gcgagtgcca
    14821 tgctcagtca gggtttcggc aatcacgccg aggtttggat cgccttcttt cacgcggaaa
    14881 atcgacgcgc cgcccatacc gtccagcggc ttaagaatga tgtcgctgtg tttctcccag
    14941 aacgctttta gctgcgcttt attgcgcgta accagcgttt ctggcgttaa gtcagagaac
    15001 caggcggtaa acagtttctc gttacagtcg cgcaggctct gcggcttgtt aacgatcagc
    15061 gtccctttct cttcggcacg ttccagaata taggtcgcgt agataaactc ggtatcaaac
    15121 ggcgggtctt tacgcatcag gagcacatcg agatcggcca gcggcagatc ctgttcaccg
    15181 acgaacgaaa accactcttc gtagttctgc ttcacgttca gcgtgcgggt atgggcgcga
    15241 gcttcgccat tgatcagata cagatcgccc atctccatat agtgaagttc gtaaccacga
    15301 cgctgtgctt ccagcaacat agcgaaactg gaatctttct tgatgttgat gtttgcgatg
    15361 gggtccatca cgatgccgag cttgatcatt attcttctcc gttagcccaa atcgccaaat
    15421 cgtacttgta gcgcggtaat ggcggtgagc gcagttgtct ctgtacgcaa aacgcgaggt
    15481 cccaacagga tatcagtaaa ttgatagcgg gcagtcatgg caatttcatc tgccgataaa
    15541 ccgccttccg ggccaatcag caggcggacg cgttcaaccg gtaacggcaa cgtattgatg
    15601 ctgttactgg cgcgcgggtg aagattcagt ttcagtcctt catcctgctc tgcacaccag
    15661 gcttccagat ccatcgctgg acggatttcc ggcacccggt tacgaccaca ctgctcacag
    15721 gcagcaattg caatcttctg ccactgctgg agcttcttgt tcagacgttc actatccagt
    15781 ttaacgccgc agcgctcaga aaaaagtggc gtaatgaggc ttacaccgag ttcgatcgat
    15841 ttctggatcg taaattccat tttttcacca cgcgacatca cctgaccgag gtgaatatgc
    15901 agcggagatt cgcgatcgtc gatcttgcct tccagcacct tcacttccac gctttttttg
    15961 ctggcgctgg taatttcggc gtcaaagacc tggttgctac cgtcaaacaa ttgcaacgcc
    16021 tgccccggcc ccatgcgcag tacgcgcccg atatggttgg cggcatcttc gcaaagcgcg
    16081 atgtgagaat ggctggtcag tggttcagga tgataaatgc gggggatacg catagttaaa
    16141 aatccgcgtc gtctccccac gcggttgtac gcgtggggta ggggttaaca aaaagagtcc
    16201 cgctagtgta ggttagctct ttcgcgcctg gcaagcgcgt tgcacatacg ggttatgatt
    16261 gccttgcacc ttcgcgatgc gttcatcgcg ctcgcactcc cagtcggtaa ccggatacat
    16321 cttgttccat gcgttgaaca gctgcgtttg ctggcgagag agtgtcaggt tgtattggtc
    16381 gcgcatatag aagtaggtgc gcgcaatggc accgcgtgca cgcgctggtg gttcggcagc
    16441 tttttctttg aaatcgacct tcatggcgca ttgaccgtac tggccttcgc cgccattcca
    16501 ctggctgtac ataaagttgc cgcgatcgcc attcacctca ccgactgacg gctgcaggtt
    16561 atgcatatcg ctttccatct tgcgatagac cggatcttta gcgcagtttt tacgtccacc
    16621 gtcctgccag cactggcgct ggtgaccgaa ctgccaggcg ggaacgacgt gttcccactc
    16681 tacgcggctg gctcggtttt catttttgcg cacctgatag ccgcacgatt gcagatcaac
    16741 aacgcctttt ttgccctgcc agttaatttt acatccgcaa taaaacgtac cgggcgcgtc
    16801 agcgtggact tttaccgccg cggctttcgc ctgagaaaaa ctattgatac cttcggccaa
    16861 cgccgggccg gaaaatgctg cgctcagtac caccgcagca atagacaaat aacggtacat
    16921 cacttactcc gtgttaaaac gagccagcaa cgtagcgaaa gttgttttgg tatgcaatca
    16981 gccagatcag gaaagttcct gatagttcag atggttattt tgcgaccagt tgttcgccgc
    17041 agtgaacaca gcgatagacg gcttcgccac gaactacgcg attatggcgg cgtacggtaa
    17101 gctgatgctc ctggcacttg cagcggtagg ggaaggtgtt gcgacgcacg gattgcagtt
    17161 cgaactgatg cgtacgacgg gcgggaacac ccagcacgtt ttccatcatc cacttccact
    17221 ctttgccatg tggtgctacg cgcccgaaat gtttccatac cagcaaatgt gccagttcgt
    17281 gcggcaccac ttcttcaata aaggcttcac tgttttccaa cagcaaaacg ggattgaggc
    17341 ggatttcata gctttccagc caggctgttc cggcggaggt gccgcgctgg gtataagaga
    17401 gttttggctc cgggtagtta cgccccaatt tcaggttagc ctgggcgagt ttttcccgca
    17461 ggcgacgcat aacggcctgt tggatggcga tagggagacg ggatgttttc atagcggcag
    17521 aggatagagc gaagaaaaga tgactgcaag aggtggcttc ctccgcgatg ggaggaagct
    17581 tggggagatt aatcgtgagc gcctatttcg cgcagtttac gacctttcat cagattacgt
    17641 tcaatatgtt ccagcgaaac gtgtttggtt tccggtacca gccacaatgt cagcaggata
    17701 aacagtacgt tcagagccgc atacacccag aaggtgttgg cgttacccag tgtgttgagc
    17761 atggtcagga acgttgcgcc aacgatcatg ttggcaatcc agttggtggc ggtagagcag
    17821 gtgatgccaa aatcgcggcc tttcagcggc tgaatttcgg agcacagtac ccaaatcagc
    17881 ggaccggcac tcatggcaaa accgacaata aacatcagca gcatggcgat ggcgaaatac
    17941 tgcgctgacg gagagtgaat accgatatgc atcattgtac cgagtacgcc catgccagca
    18001 gccatcacca ggaagcccag cgttagcgtt ggtttacgtc cccagcggtc aacaaggccg
    18061 attgcgataa aggtggcaag tacgttggtc aggccgacaa tcactgtccc ccacatttgc
    18121 tcggtagtgt tggtataacc cgccagttcg aagattttcg gcgcgtaata catgatgacg
    18181 ttcatcccgg tgaattgctg cattacctgt aacagtacgc caaggaacac cgcgcggcgg
    18241 aagttgctat tctctttaaa cagcgcccag ccactctgtt taacctgcaa actttcacgg
    18301 atttcatcca gttcgcgttt cgcttccgcg ctggtgtcac gcaggcgtag cagcacgcgt
    18361 tcggcatcaa caaaacggcg tttggcggca aaccaacgtg ggctgtctgg caggaagaag
    18421 acaccaatca gcagcaaaat tgccgggatg ataatcacac ccagcatcca gcgccatgca
    18481 ccggtgtagc tgaaggcggt atcagaaaga taagcaccga ggatcccgat agtgatcatc
    18541 aactgataca tcgagatcat actgccacga attttttccg gcgcaatttc agagaggtac
    18601 agcggtgcgg tataagaggc cacacccacc gccagcccca gtagaacgcg ggaaagaatc
    18661 agtacttcaa cgtttggcgc agccgcagag aacagcgaac cggcaacaaa caaaattgcg
    18721 ccgatcatca ggctcttttt gcgcccgagt ttaaaggaga gccagccgct gcccaccgca
    18781 ccgactgccg caccgaacat catggagctt acgacccatt cttgcgtgtg cgaagtaatc
    18841 tggaattcat ctgcaataaa cggcagtgcg ccagcaatta caccgatatc caggccaaag
    18901 agtaatcccg ccagagcggc aaggaagcag acgaaaaacg tcattgcctt gtttgaccgc
    18961 ccctgttttt tagcgtcagg catgatgccc tccaatatgg ttatttttta ttgtgaatta
    19021 agataggtga gtacgacgta aaaagatgtg aagcaaatca catcagtgta atcgcttaca
    19081 ctaacattta tcttagttat ggtttaagtg catgaaaata attgagttat atcatcatag
    19141 attaaacgct gttatctgca attaagactt tactgaaaag aaatgtaaca actgtgaaaa
    19201 ctgaataata atatgaaaat attacaaata tttggctggt gttattggtg taatcggttt
    19261 cagtagtgat gataatttgc gataaaacgt gttgaggaag aatgatgtta ttgtgcgggc
    19321 agctttttgc cggatgcggc gtgaatgcct atccaccgcg gtgaggtaaa agaaaaaggc
    19381 cagcgcgagg ctggcctttg aaagcaggtg aagaaagatt acttcagacc ggcagcatcg
    19441 cgcagcagct gcgctttgtc ggttttttcc cacgggaaat gttcacgacc aaagtgaccg
    19501 tatgctgcgg tttctttgta gatcgggtgc agcagatcca gcatctgaat cagaccgtat
    19561 gggcgcaggt cgaagaactc acgtaccagc agagtcagtt gttcagaagg cactttctca
    19621 gtaccgaaag tttctaccat gatggaggtc ggttcagcca cgccgattgc gtaggaaacc
    19681 tgaatttcac aacgatcggc caggccagca gcaacgatgt ttttcgcgac ataacgtgct
    19741 gcgtaggctg cggaacggtc cacttttgat ggatctttac cagagaatgc tccgccaccg
    19801 tgacgtgcca tgccgccgta ggtatcaacg ataattttac gaccagtcag accgcagtca
    19861 cccatcgggc caccgataac aaaacgaccg gtcgggttga tgaagaatgt ggtggcagaa
    19921 gtcagccatt cagcgggcag aattggcttg atgatctctt ccattaccgc ttcttgcagc
    19981 gatttctggt cgatctcttc agagtgctga gtggaaagca cgacagcatc aataccaacg
    20041 attttgccgt cgtcatactg gaaagtcacc tggcttttcg cgtccgggcg cagccacggc
    20101 agagtgccgt ttttacgcac ttcagcctga cgctgtacca gacggtgtgc ataggtgata
    20161 ggtgctggca tcagcacgtc ggtttcatta gttgcgtagc caaacatcag accctggtca
    20221 cccgcgccct gttccagcgg atcggcacgg tcaacgccct ggttgatgtc aggagactgt
    20281 ttgccgatag cgctcagaac cgcacaggag ttagcgtcaa agcccatgtc ggaatgcaca
    20341 tagccaattt cgcgaacggt gttacgagtg atctcttcga tgtctaccca ggcgctggtg
    20401 gtgatttcgc cgccaactaa aaccatgccg gtttttacgt aggtttcgca agcaacgcgt
    20461 gctttcggat cctgttcgag gatcgcgtct aaaacggcat cagagatttg gtcagcaatt
    20521 ttgtcaggat gcccttcaga gacggactcg gacgtaaaaa ggtgttttgc catatttaat
    20581 atcacctaaa gagaatttgg ttagctcaaa ctgttgtgtg gattttctgt ggtagcggat
    20641 cctaccacga ctctgcaggt taaaaacact ggcagtctga gtgttaatcg gtatggatgg
    20701 attaacatct agatggctat tttaggtcaa ttcttcaccc gatttccact tttttttgaa
    20761 tcgtgtctca ttctgttaaa aacgtggctg gaaatttttt ctgacaatgc cggcattctg
    20821 cgtatttata ttttgcaatt ttctgccatt gtggggtata aaacgcggcg cgcggcttaa
    20881 ataaaaagca cacgacgttt ctttcgtgtt gccacttcca gccgggttga aatcagagtt
    20941 ttggcttgtg ggttcgtctt aacaggcggc cgtggaggtg atacgaaata atgaaccgta
    21001 gtctgctgct taacctgtct caccgttctg gtgaagattc gttccccgca ctctgcatct
    21061 ctgctttgca tacctgccga tgttataccc atctcggcgc ttctcaggat tcaagagctg
    21121 gttacagtta ctgaggactg aacaagggcg ctcttgtaaa aacaagagtt ttctcgtggt
    21181 ttcgccgaac tgtcacactt acgttcggtt atgtgcttaa taatgttatg aaaaagaaac
    21241 cggttgcgca gttggagcgt cagcattcac tgctggaaaa tccatgtgct tatgggttgt
    21301 tatcgcagtt ccaggctgcg atagtcgtta actgttttac acttaataaa ataatttgag
    21361 gttcgctatg tctgacgaca tgtctatggg tttgccttcg tcagcgggcg aacacggtgt
    21421 actacgctcc atgcaggagg ttgcaatgag ctcccaggaa gccagcaaga tgctgcgtac
    21481 ttacaatatt gcctggtggg gcaataacta ctatgacgtt aacgagctgg gccacatcag
    21541 cgtgtgcccg gacccggacg tcccggaagc tcgcgtcgat ctcgcgcagt tagtgaaaac
    21601 tcgtgaagca cagggtcagc gtctgcctgc actgttctgt ttcccacaga tcctgcagca
    21661 ccgtttgcgt tccattaacg ccgcgttcaa acgtgcgagg gaatcctacg gctataacgg
    21721 cgattacttc cttgtttatc cgatcaaagt taaccagcac cgccgcgtga ttgagtccct
    21781 gattcattcg ggcgaaccgc tgggtctgga agccggttcc aaagccgagt tgatggcagt
    21841 gctggcacat gctggcatga cccgtagcgt catcgtctgc aacggttata aagaccgcga
    21901 atatatccgc ctggcattaa ttggcgagaa gatggggcac aaggtctatc tggtcattga
    21961 gaagatgtca gaaatcgcca ttgtgctgga tgaagcagaa cgtctgaatg tcgttcctcg
    22021 tctgggcgtg cgtgcacgtc tggcttcgca gggctcgggt aaatggcagt cttccggcgg
    22081 ggaaaaatcg aagttcggcc tggctgcgac tcaggtactg caactggttg aaacgctgcg
    22141 tgaagctggg cgtctcgaca gcctgcaact actgcacttc cacctcggtt cgcagatggc
    22201 gaatattcgc gatatcgcca cgggcgttcg tgaatccgcg cgtttctatg tggaactgca
    22261 caagctgggc gtcaatattc agtgcttcga cgtcggcggc ggtctgggcg tggactatga
    22321 aggcacccgt tcgcagtctg actgctccgt aaactacggc ctcaatgaat atgccaacaa
    22381 catcatctgg gcgattggtg atgcgtgtga agaaaacggt ctgccgcatc cgacggtaat
    22441 caccgaatcg ggtcgtgcgg tgactgcgca tcacaccgtg ctggtgtcta atatcatcgg
    22501 cgtggaacgt aacgaataca cggtgccgac cgcgcctgca gaagatgcgc cgcgcgcgct
    22561 gcaaagcatg tgggaaacct ggcaggagat gcacgaaccg ggaactcgcc gttctctgcg
    22621 tgaatggtta cacgacagtc agatggatct gcacgacatt catatcggct actcttccgg
    22681 cacctttagc ctgcaagaac gtgcatgggc agaacaactc tatctgagca tgtgccatga
    22741 agtgcagaag caactggatc cgcaaaaccg tgcgcatcgt ccgataatcg acgaactgca
    22801 ggaacgtatg gcggacaaaa tgtacgtcaa tttctcgctg ttccagtcaa tgccggacgc
    22861 atgggggatc gaccagttgt tcccggttct gccgctggaa gggctggatc aagtgccgga
    22921 acgtcgcgct gtgctgctgg atattacctg tgactctgac ggtgctatcg accactatat
    22981 tgatggtgat ggtattgcca cgacaatgcc aatgccggag tacgatccag agaatccgcc
    23041 gatgctcggt ttctttatgg tcggcgcata tcaggagatc ctcggcaaca tgcacaacct
    23101 gttcggtgat accgaagcgg ttgacgtgtt cgtcttccct gacggtagtg tagaagtgga
    23161 actgtctgac gaaggcgata ccgttgcgga tatgctgcaa tatgtgcagc tcgatccgaa
    23221 aacgctgtta actcagttcc gcgatcaagt gaagaaaacc gatcttgatg ctgaactgca
    23281 acaacagttc cttgaagagt tcgaggcagg tttgtacggt tatacttatc tggaagatga
    23341 gtaagtccgt attacttgaa tccgcttaat ttagcggtga taatccgcca caatttattg
    23401 tgacaaatcc aacccttcct cgtcgggcct aacgacgcgg aagggttttt ttatatcgac
    23461 tttgtaatag gagtccatcc atgagcacct taggtcatca atacgataac tcactggttt
    23521 ccaacgcctt tggtttttta cgcctgccga tgaacttcca gccgtatgac agcgatgctg
    23581 actgggtgat tactggtgtg ccgttcgata tggccacttc tggtcgtgcg gggggacgcc
    23641 acggtccggc agcgatccgt caggtttcga cgaatcttgc ctgggaacac aatcgcttcc
    23701 cgtggaattt cgacatgcgt gagcgcctga acgtcgtgga ctgcggcgat ctggtatatg
    23761 cctttggcga tgcccgtgag atgagcgaaa aactgcaggc acacgccgag aagctgctgg
    23821 ctgccggtaa gcgtatgctc tctttcggtg gtgatcactt tgttacgctg ccgctgctgc
    23881 gtgctcatgc gaagcatttc ggcaaaatgg cgctggtaca ctttgacgcc cacaccgata
    23941 cctacgcgaa cggttgtgaa tttgaccacg gcaccatgtt ctataccgcg ccgaaagaag
    24001 gtctgatcga cccgaatcat tccgtgcaga ttggtattcg taccgagttt gataaagaca
    24061 acggttttac cgtgctggac gcctgccagg tgaacgatcg cagcgtggat gacgttatcg
    24121 cccaagtgaa acagattgtg ggtgatatgc cggtttacct gacctttgat atcgactgcc
    24181 tagatcctgc tttcgcgccg ggaaccggta cgccagtgat tggcggcctg acctccgatc
    24241 gcgccattaa actggtacgc ggcctgaaag atctcaacat tgttgggatg gacgtagtgg
    24301 aagtggctcc ggcatacgat cagtcggaaa tcaccgctct ggctgcggcg acgctggcgc
    24361 tggagatgct gtatattcag gcggcgaaaa agggcgagta agcaccagat gcgatgcgca
    24421 cgggtaaaac gtgccattaa tgtcggatgc ggcgtgaacg ccttatccga cctacgttcg
    24481 gcacccgtag gccggataag atgcgccagc atcgcatccg gcaatgcgca caaggtaaca
    24541 aatgtgccat taatgtcaga tgcggcgtga acgccttatc tgacctacgt tcgacaccac
    24601 caggctttac ttaatcccat ccgcgctcat gcgatcgcga atatgctggg cgcgttcggc
    24661 ggatgccgga tggtcgtcaa acattgagct ttggcggcct tcttccagtt tcgccagttt
    24721 ttcaaagctg gtggcaagac ctgccgggct gatgccgcgt tggcgcagaa gatcgtaaga
    24781 ataatcatcg gcttctgctt cctggcgctg ggagaattgc gaattgacta atttctcgcc
    24841 cagatcacca agttgtgatt gagataaact gccgacaatc ccgcccgcag aggccgcagc
    24901 tactcgcacg gcatttgtac caagcgccac ctgcatccct ttcttcacat ggcctaacgc
    24961 cacgtgcccc atctcgtgac cgatcaccgc ttcgacttcg ttatccgtca tcatatccat
    25021 cagcccgcta tagacgcgga tacagccgtt agccattgca aaggcgttca catccttcgc
    25081 catatacact ttgtaattca ccggctgacc gttgatattg ttgcctagcg cattggcaat
    25141 agttgtcaga cgtttagcgt attcgctatt ggctggcgca atcgtcgcct tgctgtccat
    25201 ctcctgacat gcctgatcgc tcagggtttt cacctgcgca tcactcaaac tgtaagcctg
    25261 aaaagcttcc gctcctgatg agagcagtcc gttggagtcc atattctggc aaccagtcag
    25321 taccgttgcc acgctcattg ctaccaataa ggcgcgaatt ttcatgtttt ctcttccgca
    25381 caaggtcagg attattctaa aaatgcgccg tttgcaggtg aatcgacgct cagtctcagt
    25441 ataaggaaaa gcgcagcgga cgggcgagta gattgcgcaa catgcgagca tgatccagag
    25501 atttctgaag cggcaaaagg atgttccatg tacatgacgc gcggcttgcg gtaaattgtt
    25561 ggcaaatttt ccggcgtagc ccaaaacgcg ctgtcgttaa gggcgtgccc ttcatcatcc
    25621 gatctggagt caaaatgtcc tcacgtaaag agcttgccaa tgctattcgt gcgctgagca
    25681 tggacgcagt acagaaagcc aaatccggtc acccgggtgc ccctatgggt atggctgaca
    25741 ttgccgaagt cctgtggcgt gatttcctga aacacaaccc gcagaatccg tcctgggctg
    25801 accgtgaccg cttcgtgctg tccaacggcc acggctccat gctgatctac agcctgctgc
    25861 acctcaccgg ttacgatctg ccgatggaag aactgaaaaa cttccgtcag ctgcactcta
    25921 aaactccggg ccacccggaa gtgggttaca ccgctggtgt ggaaaccacc accggtccgc
    25981 tgggtcaggg tattgccaac gcagtcggta tggcgattgc agaaaaaacg ctggcggcgc
    26041 agtttaaccg tccgggccac gacattgtcg accactacac ctacgccttc atgggcgacg
    26101 gctgcatgat ggaaggcatc tcccacgaag tttgctctct ggcgggtacg ctgaagctgg
    26161 gtaaactgat tgcgttctac gatgacaacg gtatctctat tgatggtcac gttgaaggct
    26221 ggttcaccga cgacaccgca atgcgtttcg aagcttacgg ctggcacgtt attcgcgaca
    26281 tcgacggtca tgacgcggca tccatcaaac gcgcagtaga agaagcgcgc gcagtgactg
    26341 acaaaccgtc cctgctgatg tgcaaaacca tcatcggttt cggttccccg aacaaagccg
    26401 gtactcacga ctcccacggt gcgcctctgg gcgacgctga aattgccctg acccgcgaac
    26461 agctgggctg gaaatatgca ccgttcgaaa tcccgtctga aatctatgct cagtgggatg
    26521 cgaaagaagc aggccaggcg aaagaatccg catggaacga gaaattcgct gcttacgcga
    26581 aagcttatcc gcaggaagcc gctgaattta cccgccgtat gaaaggcgaa atgccgtctg
    26641 acttcgacgc gaaagcaaaa gagttcattg ctaaactgca ggctaacccg gcgaaaatcg
    26701 ccagccgtaa agcgtctcag aatgctatcg aagctttcgg tccgctgttg ccggaattcc
    26761 tcggcggttc tgctgacctg gcaccgtcta acctgaccct gtggtctggt tctaaagcaa
    26821 tcaacgaaga tgctgcgggt aactacatcc actacggtgt tcgcgagttc ggtatgaccg
    26881 cgattgctaa cggtatctcc ctgcacggtg gtttcctgcc gtacacctcc accttcctga
    26941 tgttcgtgga atacgcacgt aacgccgtac gtatggctgc gctgatgaaa cagcgtcagg
    27001 tgatggttta cacccacgac tccatcggtc tgggcgaaga tggcccgact caccagccgg
    27061 tagagcaggt cgcttctctg cgcgtaaccc cgaacatgtc tacatggcgt ccgtgtgacc
    27121 aggttgaatc cgcggtcgcg tggaaatacg gtgttgagcg tcaggacggc ccgaccgcac
    27181 tgatcctctc ccgtcagaac ctggcgcagc aggaacgaac tgaagagcaa ctggcaaaca
    27241 tcgcgcgcgg tggttatgtg ctgaaagact gcgccggtca gccggaactg attttcatcg
    27301 ctaccggttc agaagttgaa ctggctgttg ctgcctacga aaaactgact gccgaaggcg
    27361 tgaaagcgcg cgtggtgtcc atgccgtcta ccgacgcatt tgacaagcag gatgctgctt
    27421 accgtgaatc cgtactgccg aaagcggtta ctgcacgcgt tgcggtagaa gcgggtattg
    27481 ctgactactg gtacaagtat gttggcctga atggcgctat catcggtatg accaccttcg
    27541 gtgagtcagc tccggcagag ttgctgttcg aagagttcgg cttcaccgtc aacaacgtcg
    27601 ttgcgaaagc aaaagaactg ctgtaattag catttcgggt aaaaaggtcg cttcggcgac
    27661 cttttttatt accttgatat gtccgtttgc ggacaagcaa tagataaagc gtgttgcaga
    27721 tcacaaatat ttatatgcaa taaatatcaa ttatgtaata tgcatcacga tatgcgtatt
    27781 gacatttgtt gttatatcta taactcaatg ttatataaga aattaataat tcactgtttt
    27841 caaaacaccg gtttccctgc tcaattgctt tcattaaacc gcacgagtat tttattttta
    27901 ccgccggacg gtaccctaaa aataaaataa ggataattta tgcggcttag tgactatttt
    27961 ccagaatcat caatctcagt tatacattca gcaaaagatt ggcaggaagc tatcgatttc
    28021 tcgatggtat cattgctgga taaaaactat atcagcgaga attacattca ggcaattaaa
    28081 gattccacca ttaacaatgg cccttattat attctcgcac caggcgtggc aatgcctcat
    28141 gcgcgaccgg aatgtggggc gcttaaaacc gggatgtctt tgacattact tgaacaaggt
    28201 gtttattttc cggggaatga cgaaccaatt aaattactca tcggactctc tgctgccgat
    28261 gccgattcgc acattggcgc tattcaggcg ttaagtgaat tactgtgcga agaagaaata
    28321 ctcgaacaac tcttaacagc atcatcagaa aaacaattag cggacattat cagccacaga
    28381 taattactct ctcctctaca ggataatatt atggaaaaca agtctgctcg tgcaaaggtc
    28441 caggcttttg ggggcttttt gactgcaatg gtcatcccca atattggtgc ttttattgcc
    28501 tggggtttta ttactgcgtt atttattccc accggttggc tgcctaacga acatttcgcc
    28561 aaaattgtcg gcccgatgat tacctattta ttgcccgtga tgattggttc tacaggtggt
    28621 catctggtcg gcggtaaacg cggggcggtc atgggcggaa taggtactat tggtgtgatc
    28681 gttggcgcag agatcccgat gttccttggc tcaatgatca tggggccgct cggtgggttg
    28741 gtcataaaat atgtcgataa ggcactggaa aaacgcatac ctgccggttt tgagatggtt
    28801 atcaataact tctcattagg tatcgcgggg atgctccttt gtctgctggg ttttgaagtg
    28861 atcggcccgg cggtgttaat tgccaatact ttcgtcaaag agtgtatcga ggcgctggta
    28921 catgcgggtt atctgcctct gctgtcagtc atcaatgaac cggcgaaagt gcttttcctt
    28981 aataatgcga tcgatcaggg cgtctattat ccgctgggaa tgcaacaggc ttcggttaac
    29041 ggtaaatcca tcttctttat ggtggcctct aacccaggtc cgggcctggg gctgctgctg
    29101 gcgtttacct tgtttggtaa agggatgagt aaacgttctg cgcccggggc gatgattatt
    29161 cacttcctcg gtgggatcca cgaactgtat ttcccatatg tgctgatgaa gccgctgact
    29221 attattgcca tgattgcggg cggtatgtct ggtacctgga tgtttaactt actggacggt
    29281 ggtctggtgg ctggcccaag tctggggtct atctttgctt acctggcact gacgccgaaa
    29341 ggctcgttcc tggcgacaat tgccggtgtt acggtaggta ccctggtgtc ctttgctatt
    29401 acttcgctga tactgaagat ggaaaaaacg gtggaaacgg agagcgaaga tgagtttgct
    29461 cagtcaacca atgcggttaa ggcgatgaaa caagagggtg cattctcgtt aagcagggtt
    29521 aagcgtatcg cctttgtttg cgatacgggg atgggctcca gtgcgatggg cgcgaccacc
    29581 ttccgtaaac gcctggaaaa agcggggctg gcaatagaag taaaacatta cgcgatagaa
    29641 aacgtgcctg cggatgccga tatcgtcgtc actcacgcca gtctggaagg gcgcgtgaaa
    29701 cgtgtgacgg ataaaccgct gatattgatt aataactata ttggcgatcc aaaactcgac
    29761 actttattta atcaattaac cgccgaacat aaacactgat tacagaggta aaaatgaaaa
    29821 ccaaagttgc tgctatttat ggcaagcggg atgtccgtct gcgcgaattt gaactgccag
    29881 aaattaccga taatgaactg ttagtgagtg taatttctga cagcgtctgt ttatcgacct
    29941 ggaaagcggc gttactcggt agtgaacata aacgcgtacc cgacgattta gaaaatcatc
    30001 cggtcattac cgggcatgaa tgtgccgggg ttattgtcga agtgggtaaa aatctcactg
    30061 gcaaatataa aaaaggccag cgttttgtat tgcaaccggc gatggggtta ccaagcggat
    30121 attcagcagg ctacagctac gaatattttg gcggtaacgc cacctatatg attattcccg
    30181 aaatcgccat taatttgggc tgcgtattac cgtatcacgg ctcttatttt gctgcggcgt
    30241 cgctggtaga gcctatgtgc tgcattattg gtgcttatca tgccaattat cacaccacgc
    30301 aatatgttta tgagcatcgc atgggcgtca aacctggcgg caatattgca ctgctggcgt
    30361 gtgcgggtcc gatgggcatt ggcgctatcg attacgccat taacggtggc atacaaccgt
    30421 cacgggtggt ggtggtcgat atcgacgaca aacgcctggc gcaggtgcag aagctgctgc
    30481 cggtggatct ggcggccagt aaaggcattg agctggtgta tgtgaatacc aaagggatga
    30541 gcgatccggt ccagacgctg cgggcgctga caggagatgt cgggttcgat gacatttttg
    30601 tttatgcggc ggtgcctgct gtcgttgaga tggctgacga attactggcg gaagatggct
    30661 gtctgaactt ctttgccggg ccgacggata aaaacttcaa agtgccgttt aatttctaca
    30721 acgtccatta caacagcacg cacgtagtcg gtacatccgg cggttcaacg gacgacatga
    30781 aagaggcgat tgcgttaagc gccacggggc agttgcagcc gtcctttatg gtcacgcata
    30841 tcggtgggct ggatgcggtg ccagataccg tgctcaatct gccggatatc cctggcggta
    30901 aaaaactcat ttataacggc gtgaccatgc cgctcactgc cattgccgat tttgccgaaa
    30961 aaggcaaaac cgatccgcta tttaaagagt tggcgcggct ggttgaggaa acgcacggca
    31021 tctggaatga acaggccgag aaatatctgc tggcacaatt tggcattgat atcggggagg
    31081 ccgcgcaatg atgtccctgg cgtggccatt atttcgcgtt acggaacagg cagcgttggc
    31141 tgcctggccg caaaccggat gtggcgacaa aaataaaatt gatggcctgg cggtcaccgc
    31201 gatgcgccag gcattaaacg acgtcgcttt tcgtggacga gtggttatcg gcgaaggaga
    31261 aattgaccat gcgccgatgc tgtggattgg cgaagaggtg ggcaaaggcg atgggccaga
    31321 agtcgatatc gcggttgatc ccattgaagg cacgcggatg gtggcgatgg ggcagagcaa
    31381 tgcgctggcg gtcatggctt tcgcccctcg ggatagcctg ttacatgcgc ccgatatgta
    31441 tatgaaaaag ctggttgtta atcgactggc tgccggggtg attgatctgt ctttgcctct
    31501 ggcggacaac ttgcgtaacg tggcgcgggc gttaggtaaa ccgctggaca agctgcgcat
    31561 ggttacgctg gataaaccgc gcctgagtgc cgcgattgag gaagcaacac agctgggcgt
    31621 gaaggttttt gccctgccgg atggcgatgt cgccgccagc gtgctgacct gctggcagga
    31681 taatccttac gatgtgatgt acaccatcgg cggtgcgcca gaaggcgtga tttctgcctg
    31741 tgccgttaaa gcattaggcg gggatatgca ggccgagctg attgactttt gtcaggctaa
    31801 aggggattac acggaaaatc ggcagattgc agagcaggag agcaagcgtt gcaaggcaat
    31861 gggcgttgac gttaaccgtg tgtactcgct cgatgaactg gtgaggggga acgatatcct
    31921 ctttagcgct acgggcgtga cgggcggcga gttggtgaac ggtatccaac agacggcgaa
    31981 tggggtgcgg acgcagacat tactgatcgg cggcgcggac caaacgtgta atataataga
    32041 ctccctgcat tgatggtgat ctatcggaag accaatggcg aagctgacag aagatgatgt
    32101 gcttgagcaa ctggatgcac aggacaattt attttcattt atgaaaactg cgcattctat
    32161 tttgctccag gggatacgcc agtttctgcc gtcgctgttt gtcgataacg atgaagagat
    32221 cgtggaatat gcagtgaagc cgttactcgc ccaaagcggc ccgcttgacg atattgatgt
    32281 tgcgctgcgt ttgatttatg cgctggggaa aatggataaa tggctgtacg ccgatatcac
    32341 gcatttttcc cagttctggc attacctgaa cgaacaggat gaaacgcccg gatttgccga
    32401 tgacatgacc tgggatttta tcagcaacgt caatagcata acccgcaatg cgatgctcta
    32461 tgacgcgttg aaagcgatga agttcgccga tttcgccgtc tggtcagagg cgcgttttag
    32521 cgggatggtc aaaacggcgc tgacgctggc agtaacgaca atcttaaagg aattaacgcc
    32581 gtgaaaattg aattaacggt gaatgggctg aagatacagg cacagtacca gaacgaagag
    32641 attgaaaatg tacataaacc gttgctgcgt atgctggcgg ccttacagac ggtaaatccg
    32701 cagcggcgta cggtggtttt tctttgcgct ccgccgggga cgggtaaatc taccctaacc
    32761 accttctggg aatatctcgc gcaacaagac ccggagctgc ccgctattca gacgctcccg
    32821 atggatggtt ttcaccatta caatagctgg ctggacgcgc atcaattgcg ccccttcaaa
    32881 ggcgcaccag agacatttga cgttgcgaaa ctggcggaaa atctgcgcca ggtggtggaa
    32941 ggggattgta cgtggccgca gtacgatcga caaaagcatg atcctgttga agatgcgttg
    33001 cacgttaccg caccactcgt catcgtcgaa ggaaactggt tgttgctgga cgacgagaag
    33061 tggtgccagc ttgcgcaatt ttgtgatttc tcgatcttta tcaacgcgcc agctactgcg
    33121 ttgcgggagc gtctggtggg gcgcaagctg gcgggagggg tatcgctggc agatgcagaa
    33181 gccttttatg accgtaccga cgggccgaat gttcgccggg tgctggaaga gagtctgcct
    33241 gcaaatttga ccttaatgat gaccgctacg ggtgaatatc gtctggtgga ttaacgttcc
    33301 tgattacacc atcttccagt cgcaccacac gagagaaatg acgccgggta aatgcggcgt
    33361 catgactgat tgctaccacg ctcgtgcctc gctggcggca cttctccagc cagctttcaa
    33421 acacgctcaa ccaattttcg tcaaaatccc gactcggctc gtccagcagt aatagtggcg
    33481 gagagagtgc ttccaggcag gcgacggcga ccatccgtcg ctgcgcacta tgcagatcca
    33541 acgggtgcga gttggcagtg tctgctaact gacaacattg cagggcagca tgggtacgtt
    33601 gagtgatttc atccgccggg catttttgca gtttcaaacc aaatgcgatc tcgtcagcga
    33661 cggtgctgtg aaaaagttgg ttttccgctt cctgaaacag tacgccaacc tttgccgcgc
    33721 gctggcggtt tttcaggttt ttcatcgcct gttgttgcag cataaccgta ccggctgtgg
    33781 gcgtaagaag acctgccatt actcgtaaca gcgtcgattt ccctgcgcca ttgtcaccgg
    33841 tcagcgccaa ccattcacct tgtttgagtt gcagagaaat gtcgcaaaga caatccgttg
    33901 ccgcgccagg ccagcgataa gatatctgat ttaacgttaa catagtggct ggagcgctcc
    33961 gttttgcaat tgccacgctt gctggcagta gttcaggaaa ggtgtgcgat gacgttcaaa
    34021 aagaataatc agcgaaccac gttcaaacgc ccagtgttgt aagcgctgca acagcatttc
    34081 gctggcctgc ggcgtcaggc ggctaaaggc ttcatcaaga attaagagct ttggctgcat
    34141 cgcgatggcg caggcgatga ccacgcgctg tgtctctcca ccggagagtg ttgccgggtg
    34201 acgatggcgc aacggctggc actcggtcag agtcagggcg gcatcaatcc gcgccataat
    34261 ctctgcttca gcaagacaca gattttctgg cccaaaggca acttcttctt ccacgctaaa
    34321 ggtacagccg gagagctgca aatagggcga ttgctggacg agctggatgg tggcggattg
    34381 ttcattaagc gggagatgcc caatgggcgt accgaggagc gtccccgtgc ctgttatctc
    34441 tcctggcaga aagtccggat accagcccgc catcagctgt gccagcgtac ttttgccact
    34501 gccgttgtca ccaaagatgg cgaccatccc cggtttgaca tagtgaaagt cataacagaa
    34561 cggaggatgc gttgagtgtg tcgggcaata acggaactgt tctaacgtaa ccatatccac
    34621 gctccgaatt ctgtcagcat cagcaagatc atggtgtaac gcgctacgcg ttgtagggtg
    34681 ctatcggctg gtgcccacaa cgttgttcgt cggttgtgga tccgaaatgc ccgcatatcc
    34741 agcgccgcac cacggacagc cagatcgtta agcgcattgt gtgttagcgg aataattaac
    34801 gcgggcatcg cacgtaaacg ctgataccag ccctcatcca gcggcacgcc gcgggcacgc
    34861 tgcgcttcat gaataatcgc taattgccgt tttaactgct caacgaccaa taacggcccg
    34921 gcaaacagat aagcgacgcc tggcggcagg cgagaagcaa acagagcgcg aataaaacat
    34981 tgcacgggga cgtactgcat ccacaactgt gaggttgaaa caatcaccag aatccgcaac
    35041 cagagcgtaa tagcatgcga ccaccgttct ggcgagcgtg gcgtgccgct tagccattct
    35101 ggtagccagc caccgtgtac cagccacagc ccggctccca gcgagaacat cagccagacg
    35161 acatattttg cccgccgccg cgtggccttt agcgcaataa ggcagaaaaa ggtcgccgcg
    35221 ctatagatcg gcaaaatggt ctgcgcgggc aggataagcg tggtgcaggc cgccaatgcc
    35281 cacagtgtta atgaggtaaa tggatgcatt tagcgcacgg cagccattgc cggaaaatgg
    35341 cgcgtggtgc gaatcggcag ctggcgcagt aaaagccaga caatcaccgc tgtaagaatt
    35401 ttatcgacca ggttcgcgcc tatcaccgta atcgccaccg actccaccag gttttgcccc
    35461 atcgagtgca tccaggcaac gaacaaatcg gctccgctac cggtgacacc gccgaacagc
    35521 gcagtacgca gcggtacagc gacgaccgtt accgcaagcg taataatcac gccgctgaca
    35581 acgacttttg gcagggtgcg aaaccaaccc gctcgcgcca gccaaccggc gaccaggccg
    35641 atgaccatcg cgacgggtgc aaatgcggcg gcgatcgggt cggtcagcaa tccccagagt
    35701 aaattggtca gtaagccggt cagcattccg atcaccggac caagcagtac cgcgctaata
    35761 agtgtgccga tggagtcgag aaatataggt aatttgacca tgctggccag ttgcccgccg
    35821 atcatattga tggcgataga tataacgatc aacaccagtg cctgactgga aaagtggcta
    35881 cgcgccataa gaaaacctct ttgaaagtag ttatttaacg ggggaaatat gcaactcgtc
    35941 gtaaccagaa agcgcgcaag gttggcggct aaacgccagt tcctcaaggc taccgatcac
    36001 cagttcaagc gtggtccgca cggtacagcc gggcatcata tgaccgccaa gcatcgtgcc
    36061 gtgtggatcg gaaacgcaga gatgaagatg ctcaccactc tgttccagcg tgccgtttag
    36121 tgagatcact tcgaatgtac cgttcaggag cgtggtgcct tcttgcctgg catagcgcaa
    36181 ggcgacgtca gtcaggctac cggtacagcc tgcaatccag gcggcatgaa gttgatgctg
    36241 ctgtgcaaaa gcgtgtagct gggaaaaaac ttcctgcccg gggaggaggc gcagtgcgta
    36301 aaagcgtgcg gaggaagaat atgggtaggg caatgtcatc attggagtac tccgaaactc
    36361 ggacgtattg cggataatat cgacgctgca tcagtcatat tctgatataa gtcagggttt
    36421 gtgacggcac aacgaaaaga ttttgctacg cttattcgtg attctgcaaa gtggaataaa
    36481 ttctacaggg gcggggctga aaacgtgacg taagtcagat aattgctttc tttgactgga
    36541 caatcattcc ttttattcca cgtttcgctt atcctagctg aagcgtttca gtcgattaaa
    36601 tgttcgacaa ttaaccaatc agtcgcagtt tgcgacaggt aaggtttccc cggacgattt
    36661 gctggattac tctgtctggc aaatttgctc agggaaaacc ttgcaggaga tctatgaccg
    36721 tacgcgtagc gataaatggc ttcggtcgca tcgggcgtaa tgtggttcgt gctttgtatg
    36781 aatccggacg ccgggcggaa attaccgtgg tggcaatcaa cgaactggcg gatgctgcgg
    36841 gcatggcgca tttgttgaaa tatgacacca gccatggccg ttttgcatgg gaagtacgac
    36901 aggaacgcga tcaacttttt gttggtgatg acgccatccg cgtattgcat gaacgttcac
    36961 tgcaatcgct cccctggcgt gaacttggcg ttgatgtagt cctcgactgc accggcgtat
    37021 atggctcccg cgagcatggc gaagcgcata ttgccgccgg ggccaaaaaa gtgctctttt
    37081 cacatcctgg cagtaacgat ctcgacgcga ccgttgttta cggcgtcaat caggatcaac
    37141 ttcgtgcgga acaccgcatc gtttctaacg cttcctgtac cacgaattgc ataattcccg
    37201 tcatcaaatt gttagatgat gcgtacggta ttgagtccgg cactgtgacc acaattcact
    37261 ccgccatgca cgatcaacag gttattgatg cataccatcc tgacctgcgt cgcacccggg
    37321 cagccagcca gtcgatcatt ccggtcgata ctaaactggc cgccggtatc acacgatttt
    37381 ttccgcaatt taacgatcgc tttgaagcga ttgcggtacg tgtgccaacc ataaatgtga
    37441 cggcaatcga tttaagcgtg acggtgaaga aacctgtaaa agccaatgaa gtcaacctgt
    37501 tgctgcaaaa agcagcacaa ggtgcatttc atggtatagt tgactatacg gaattgccgt
    37561 tggtctctgt agattttaac cacgatccgc acagtgccat tgtcgatggc acccaaaccc
    37621 gggtcagtgg cgcacacctg atcaaaacgt tggtctggtg cgataacgaa tggggctttg
    37681 ctaaccgaat gctcgacacg acgttagcta tggctactgt tgctttcagg taagacgcaa
    37741 gcagcgtctg caaaactttt agaatcaacg agaggattca ccatgtctgt aattaagatg
    37801 accgatctgg atcttgctgg gaaacgtgta tttatccgtg cggatctgaa cgtaccagta
    37861 aaagacggga aagtaaccag cgacgcgcgt atccgtgctt ctctgccgac catcgaactg
    37921 gccctgaaac aaggcgcaaa agtgatggta acttcccacc tgggtcgtcc taccgaaggc
    37981 gagtacaacg aagaattctc tctgctgccg gttgttaact acctgaaaga caaactgtct
    38041 aacccggttc gtctggttaa agattacctc gacggcgttg acgttgctga aggtgaactg
    38101 gttgttctgg aaaacgttcg cttcaacaaa ggcgagaaga aagacgacga aaccctgtcc
    38161 aaaaaatacg ctgcactgtg tgacgtgttc gtaatggacg cattcggtac tgctcaccgc
    38221 gcgcaggctt ctactcacgg tatcggtaaa ttcgctgacg ttgcgtgcgc aggcccgctg
    38281 ctggcagctg aactggacgc gctgggtaaa gcactgaaag aacctgctcg cccgatggtg
    38341 gctatcgttg gtggttctaa agtatctacc aaactgaccg ttttggactc cctgtctaaa
    38401 atcgctgacc agctgattgt tggtggtggt atcgctaaca cctttatcgc ggcacaaggc
    38461 cacgatgtgg gtaaatccct gtacgaagct gacctggttg acgaagctaa acgtctgctg
    38521 accacctgca acatcccggt tccgtctgat gttcgcgtag caaccgagtt ctctgaaact
    38581 gcaccggcta ccctgaaatc tgttaacgat gtgaaagctg acgagcagat cctggatatc
    38641 ggtgatgctt ccgctcagga actggctgaa atcctgaaga atgcgaaaac cattctgtgg
    38701 aacggtccgg ttggcgtgtt cgaattcccg aacttccgca aaggtactga aatcgtggct
    38761 aacgctatcg cagacagcga agcgttctcc atcgctggcg gcggcgacac tctggcagca
    38821 atcgacctgt tcggcattgc tgacaaaatc tcctacatct ccactggcgg cggcgcattc
    38881 ctcgaattcg tggaaggtaa agtactgcct gcagtagcga tgctcgaaga gcgcgctaag
    38941 aagtaaaaaa tcacagggca gggaaacctg cccttgtttc agcgcgcttt tagagcacgc
    39001 attttttcat actctaaata attcgagttg caggaaggcg acaagagagt gaatccccag
    39061 gagcttacat aagtaagtga ctggggtgag cgaacgcaga cgcagcacat gcaacttgaa
    39121 gtatgatgag tataaggccc gacgatacag gacaagagac atgtctaaga tttttgattt
    39181 cgtaaaacct ggcgtaatca ctggtgatga cgtacagaaa gttttccagg tagcaaaaga
    39241 aaacaacttc gcactgccag cagtaaactg cgtcggtact gactccatca acgccgtact
    39301 ggaaactgct gctaaagtta aagcgccggt tatcgttcag ttctccaacg gtggtgcttc
    39361 ctttatcgct ggtaaaggcg tgaaatctga cgttccgcag ggtgctgcta tcctgggcgc
    39421 gatctctggt gcgcatcacg ttcaccagat ggctgaacat tatggtgttc cggttatcct
    39481 gcacactgac cactgcgcga agaaactgct gccgtggatc gacggtctgc tggacgcggg
    39541 tgaaaaacac ttcgcagcta ccggtaagcc gctgttctct tctcacatga tcgacctgtc
    39601 tgaagaatct ctgcaagaga acatcgaaat ctgctctaaa tacctggagc gtatgtccaa
    39661 aatcggcatg actctggaaa tcgaactggg ttgcaccggt ggtgaagaag acggcgtgga
    39721 caacagccac atggacgctt ctgcactgta cacccagccg gaagacgttg attacgcata
    39781 caccgagctg agcaaaatca gcccgcgttt caccatcgct gcgtccttcg gtaacgtaca
    39841 cggtgtttac aagccgggta acgtggttct gactccgacc atcctgcgtg attctcagga
    39901 atatgtttct aagaaacaca acctgccgca caacagcctg agcttcgtat tccacggtgg
    39961 ttccggttct actgctcagg aaatcaaaga ctccgtaagc tacggcgtag tgaaaatgaa
    40021 catcgatacc gatacccaat gggcaacctg ggaaggcgtt ctgaactact acaaagcgaa
    40081 cgaagcttat ctgcagggtc agctgggtaa cccgaaaggc gaagatcagc cgaacaagaa
    40141 atactacgat ccgcgcgtat ggctgcgtgc cggtcagact tcgatgatcg ctcgtctgga
    40201 aaaagcattc caggaactga acgcgatcga cgttctgtaa gatattcctt tctgcttatc
    40261 tcaaggcccg ctctgcgggt ctttttttcg ccaaaagcaa aattgcctga tgcgctacgc
    40321 ttatcaggcc tacacgtatc ctgcaatata ttgaatttgc aggtttttgt aggccggata
    40381 aggcgttcac gccgcatccg gcatgacaaa gcgcacattg atatctgtct gagccccgct
    40441 ctgcggggat tttttcgcca aaagcaaggt gattcagatg agaaatctgt gacctatttg
    40501 gcaaaattat gctttattgt ttacccttgt cagactgccc gtcataaggc ggcggagtgt
    40561 atttctccat tttgagtcag ttgaaaagga atattgaatg gaagatttga atgttgtcga
    40621 tagcataaac ggcgcgggaa gctggctggt agctaaccag gcgctgctgc taagttatgc
    40681 agtaaacatc gtggcggcac tcgcgatcat catcgttggt ttgattatcg cgcggatgat
    40741 ttccaacgcg gtgaatcgcc tgatgatctc ccgtaaaatc gatgccactg ttgctgattt
    40801 tctttctgca ttagtccgtt acggtattat cgcctttacg ctaatcgctg ccctgggacg
    40861 cgtgggtgta caaacagcgt cagtcattgc tgtactcggt gccgcaggct tagctgttgg
    40921 tctggctttg caggggtcac tttctaacct ggccgctggc gtgttacttg tcatgttccg
    40981 accgttccgt gccggagaat atgttgacct cggcggcgta gccggtactg tgctgagtgt
    41041 gcagattttc tccaccacca tgcgtactgc agacggtaaa attatcgtta ttccgaacgg
    41101 taaaattatt gccggaaata ttattaactt ctcccgcgag ccagttcgcc gtaacgaatt
    41161 tattattggc gtggcgtatg attccgatat cgatcaggtt aagcagatcc tgaccaatat
    41221 tatccagtct gaagatcgca ttttgaaaga tcgcgaaatg actgtgcgcc tgaacgaact
    41281 tggtgcatcg tcgattaatt tcgtggtccg cgtctggagc aacagcggcg atctgcaaaa
    41341 cgtgtactgg gatgtgctgg agcgtattaa acgtgaattt gatgccgccg gtatcagctt
    41401 cccgtacccg caaatggatg tgaactttaa gcgggtgaaa gaagacaaag ctgcgtaatc
    41461 aacgctgagg ccagataata ctctctggcc tctctcttat tagttattct gattgccaat
    41521 taatattatc aatttccgct aataacaatc ccgcgatata gtctctgcat cagatactta
    41581 attcggaata tccaacgtgt tttcttatta ctttcaaggt cttgatcttg gggcagctat
    41641 gattctgccg ctcggcccac aaaatgcttt tgtgatgaat cagggcattc gtcgtcagta
    41701 ccacattatg attgccttac tttgcgctat cagcgatttg gtcctgattt gcgcggggat
    41761 ttttggtggt agcgcgttat tgatgcagtc gccgtggttg ctggcgctgg tcacctgggg
    41821 cggcgtagtc ttcttgctct ggtatggttt tggcgctttt aaaacagcga tgagtagtaa
    41881 tattgagtta gctagtgccg aagtcctgaa gcaaggcaga tggaaaatta tcgccaccat
    41941 gttggcagtg acctggctga atccgcatgt ttacctggat acttttgttg tactgggcag
    42001 ccttggcggg cagcttgacg tcgaaccaaa acgttggttt gcgctcggga caattagcgc
    42061 ctctttcctg tggttctttg gtctggctat tctcgcagcc tggctggcac cgcgcctgcg
    42121 cacggcaaaa tcacagcgca ttatcaatct ggtagtggga tgtgtcatgt ggtttatagc
    42181 cttgcagctg gcgagagacg gtattgctca tgcacaagcc ttgttcagtt aggcgctatc
    42241 tgatggaaaa ataaaacaga ggcgctaagc ttgcctccag aggtcctgaa ttttgggcaa
    42301 gtcaattaac acggagagac taacgtgaag ttcaaagtta tcgccctagc ggcattaatg
    42361 ggtattagcg ggatggcagc gcaggctaac gaattgccgg atggaccgca tattgtcacc
    42421 tccggtacgg caagtgtgga tgtggtgcca gacattgcca ctcttgcgat tgaagttaac
    42481 gtggccgcga aggatgccgc tacagccaag aaacaggcag atgagcgcgt cgcacaatac
    42541 atttccttcc ttgaactcaa tcagatcgcg aaaaaagata tcagctcagc gaatttacgc
    42601 acccagccag attatgatta tcaggatggt aaaagtatcc tgaaaggcta ccgcgctgtg
    42661 agaacggtgg aagtcacgct ccgtcagtta gacaaactga attccttgct ggatggcgcg
    42721 ctgaaggcgg gtcttaacga aattcgttca gtgtcgctgg gcgtggcgca gccggatgcc
    42781 tataaagaca aagcgcgtaa ggcagcgatt gataacgcga ttcatcaggc gcaggaactg
    42841 gcgaacggct ttcatcgtaa actggggccg gtatatagcg tgcgctacca tgtttccaac
    42901 tatcagccca gcccaatggt gcggatgatg aaagccgatg ccgcgccggt gtctgcccag
    42961 gaaacttacg agcaggccgc tattcagttt gatgatcagg tcgatgtggt cttccagtta
    43021 gaacctgtgg atcaacaacc cgctaaaaca cctgcagcac aataatactt gtagcccgac
    43081 gtattcgtcg ggctaatgcc tttacccgat attgcctcct ttttctgtaa ttttctgtaa
    43141 aaccatgacg taatcaccta tctttgctcg cggtttcatc aaggataggc tgactgaaac
    43201 ggttaagcgg acaaggatgc ggggagg
//
LOCUS       DAJVUK010000011        42293 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.011, whole genome shotgun sequence.
ACCESSION   DAJVUK010000011 DAJVUK010000000
VERSION     DAJVUK010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 42293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42293
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.011"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            21..560
                     /locus_tag="OQQ57_000640"
     CDS             21..560
                     /locus_tag="OQQ57_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5384 family protein"
                     /protein_id="HCS1955509.1"
                     /translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH
                     DEWVAERNREIQQEKQRRANAQVAANKRAATAAANKKARQDKLDAEASADKKRDQSYE
                     DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGR
                     DLMKSVGKAEENKSDSWFN"
     gene            complement(655..2232)
                     /gene="guaA"
                     /locus_tag="OQQ57_000641"
     CDS             complement(655..2232)
                     /gene="guaA"
                     /locus_tag="OQQ57_000641"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HCS1955510.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMHMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYNKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(2301..3767)
                     /gene="guaB"
                     /locus_tag="OQQ57_000642"
     CDS             complement(2301..3767)
                     /gene="guaB"
                     /locus_tag="OQQ57_000642"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HCS1955511.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            3929..5299
                     /gene="xseA"
                     /locus_tag="OQQ57_000643"
     CDS             3929..5299
                     /gene="xseA"
                     /locus_tag="OQQ57_000643"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HCS1955512.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRVQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(5296..5511)
                     /locus_tag="OQQ57_000644"
     CDS             complement(5296..5511)
                     /locus_tag="OQQ57_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HCS1955513.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(5580..7052)
                     /gene="der"
                     /locus_tag="OQQ57_000645"
     CDS             complement(5580..7052)
                     /gene="der"
                     /locus_tag="OQQ57_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HCS1955514.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEVEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(7170..8348)
                     /gene="bamB"
                     /locus_tag="OQQ57_000646"
     CDS             complement(7170..8348)
                     /gene="bamB"
                     /locus_tag="OQQ57_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HCS1955515.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYD
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(8359..8979)
                     /gene="yfgM"
                     /locus_tag="OQQ57_000647"
     CDS             complement(8359..8979)
                     /gene="yfgM"
                     /locus_tag="OQQ57_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ancillary SecYEG translocon subunit YfgM"
                     /protein_id="HCS1955516.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(8997..10271)
                     /gene="hisS"
                     /locus_tag="OQQ57_000648"
     CDS             complement(8997..10271)
                     /gene="hisS"
                     /locus_tag="OQQ57_000648"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HCS1955517.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDLNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPIVDIYLV
                     ASGADTQSAAMALAERLRDELQGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     TNGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(10382..11500)
                     /gene="ispG"
                     /locus_tag="OQQ57_000649"
                     /gene_synonym="gcpE"
     CDS             complement(10382..11500)
                     /gene="ispG"
                     /locus_tag="OQQ57_000649"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HCS1955518.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(11527..12540)
                     /gene="rodZ"
                     /locus_tag="OQQ57_000650"
     CDS             complement(11527..12540)
                     /gene="rodZ"
                     /locus_tag="OQQ57_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HCS1955519.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLLGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(12825..13979)
                     /gene="trmG/rlmN"
                     /locus_tag="OQQ57_000651"
     CDS             complement(12825..13979)
                     /gene="trmG/rlmN"
                     /locus_tag="OQQ57_000651"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HCS1955520.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(14129..14560)
                     /gene="ndk"
                     /locus_tag="OQQ57_000652"
     CDS             complement(14129..14560)
                     /gene="ndk"
                     /locus_tag="OQQ57_000652"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HCS1955521.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(14709..17021)
                     /gene="pbpC"
                     /locus_tag="OQQ57_000653"
     CDS             complement(14709..17021)
                     /gene="pbpC"
                     /locus_tag="OQQ57_000653"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HCS1955522.1"
                     /translation="MLRLLTKRGCWITLAAVPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKILQLWRALQLEWHLSKREILILY
                     LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA
                     RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLEWPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDCTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCP
                     PYGHYAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(17022..21983)
                     /gene="yfhM"
                     /locus_tag="OQQ57_000654"
     CDS             complement(17022..21983)
                     /gene="yfhM"
                     /locus_tag="OQQ57_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HCS1955523.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPDQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPNDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPANALPGLRPQFALK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPSDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPLVNHVNIVAQQA
                     LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     ALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGIALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAP
                     TIQDLPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGDEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
     gene            22183..23028
                     /gene="sseA"
                     /locus_tag="OQQ57_000655"
     CDS             22183..23028
                     /gene="sseA"
                     /locus_tag="OQQ57_000655"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HCS1955524.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIEALSDHTSPLPHMLPRPKTFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDV
                     LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
     gene            complement(23521..24297)
                     /gene="sseB"
                     /locus_tag="OQQ57_000656"
     CDS             complement(23521..24297)
                     /gene="sseB"
                     /locus_tag="OQQ57_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708361.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HCS1955525.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKPVKRAFICSIKENEEAQPNLFIGIEADGDIEEIIQATGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIVPFYERRWGGFLRDFKQNRII"
     gene            complement(24439..25722)
                     /gene="pepB"
                     /locus_tag="OQQ57_000657"
     CDS             complement(24439..25722)
                     /gene="pepB"
                     /locus_tag="OQQ57_000657"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HCS1955526.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRASERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            complement(25900..26100)
                     /gene="iscX"
                     /locus_tag="OQQ57_000658"
     CDS             complement(25900..26100)
                     /gene="iscX"
                     /locus_tag="OQQ57_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HCS1955527.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            complement(26112..26447)
                     /gene="fdx"
                     /locus_tag="OQQ57_000659"
     CDS             complement(26112..26447)
                     /gene="fdx"
                     /locus_tag="OQQ57_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HCS1955528.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            complement(26449..28299)
                     /gene="hscA"
                     /locus_tag="OQQ57_000660"
     CDS             complement(26449..28299)
                     /gene="hscA"
                     /locus_tag="OQQ57_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HCS1955529.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQADIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDNAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAALRMDQSVRRALKGHSVDEV"
     gene            complement(28316..28831)
                     /gene="hscB"
                     /locus_tag="OQQ57_000661"
     CDS             complement(28316..28831)
                     /gene="hscB"
                     /locus_tag="OQQ57_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HCS1955530.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            complement(28927..29250)
                     /gene="iscA"
                     /locus_tag="OQQ57_000662"
     CDS             complement(28927..29250)
                     /gene="iscA"
                     /locus_tag="OQQ57_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HCS1955531.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            complement(29267..29653)
                     /gene="iscU"
                     /locus_tag="OQQ57_000663"
     CDS             complement(29267..29653)
                     /gene="iscU"
                     /locus_tag="OQQ57_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HCS1955532.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLVEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            complement(29681..30895)
                     /gene="iscS"
                     /locus_tag="OQQ57_000664"
     CDS             complement(29681..30895)
                     /gene="iscS"
                     /locus_tag="OQQ57_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HCS1955533.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            complement(31007..31495)
                     /gene="iscR"
                     /locus_tag="OQQ57_000665"
     CDS             complement(31007..31495)
                     /gene="iscR"
                     /locus_tag="OQQ57_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HCS1955534.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
                     RA"
     gene            complement(31765..32505)
                     /gene="trmJ"
                     /locus_tag="OQQ57_000666"
     CDS             complement(31765..32505)
                     /gene="trmJ"
                     /locus_tag="OQQ57_000666"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HCS1955535.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKAE"
     gene            32624..33427
                     /gene="suhB"
                     /locus_tag="OQQ57_000667"
     CDS             32624..33427
                     /gene="suhB"
                     /locus_tag="OQQ57_000667"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HCS1955536.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            33572..34426
                     /locus_tag="OQQ57_000668"
     CDS             33572..34426
                     /locus_tag="OQQ57_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1955537.1"
                     /translation="MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKDTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFI
                     LSALNPQN"
     gene            34617..35897
                     /gene="csiE"
                     /locus_tag="OQQ57_000669"
     CDS             34617..35897
                     /gene="csiE"
                     /locus_tag="OQQ57_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HCS1955538.1"
                     /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD
                     DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
                     TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
                     LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML
                     RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF
                     AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
                     DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
                     YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
     gene            complement(35889..37028)
                     /locus_tag="OQQ57_000670"
     CDS             complement(35889..37028)
                     /locus_tag="OQQ57_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HCS1955539.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLAMMTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVIL
                     ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVLQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGAFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(37188..38078)
                     /gene="hcaR"
                     /locus_tag="OQQ57_000671"
     CDS             complement(37188..38078)
                     /gene="hcaR"
                     /locus_tag="OQQ57_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HcaR"
                     /protein_id="HCS1955540.1"
                     /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
                     VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKTVQEDRQLTIGFVPSAEV
                     NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
                     DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKARFAQENSQPNI
                     VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
                     KPALRDFIAIVQERLASVTA"
     gene            38214..39575
                     /locus_tag="OQQ57_000672"
     CDS             38214..39575
                     /locus_tag="OQQ57_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HCS1955541.1"
                     /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
                     FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA
                     FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
                     PGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKSPAEQFASDQYHALFSH
                     ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
                     DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
                     VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
                     CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
                     VMK"
     gene            39572..40090
                     /locus_tag="OQQ57_000673"
     CDS             39572..40090
                     /locus_tag="OQQ57_000673"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HCS1955542.1"
                     /translation="MSAQVSLELHLRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM
                     RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNC
                     QISETDIPNVFAVRVNYLLYQAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
                     AVITSHNLSVLF"
     gene            40090..40410
                     /locus_tag="OQQ57_000674"
     CDS             40090..40410
                     /locus_tag="OQQ57_000674"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-phenylpropionate/cinnamic acid
                     dioxygenase ferredoxin subunit"
                     /protein_id="HCS1955543.1"
                     /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
                     GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLP
                     EAQP"
     gene            40407..41219
                     /gene="hcaB"
                     /locus_tag="OQQ57_000675"
                     /gene_synonym="phdD"
                     /gene_synonym="yfhX"
     CDS             40407..41219
                     /gene="hcaB"
                     /locus_tag="OQQ57_000675"
                     /gene_synonym="phdD"
                     /gene_synonym="yfhX"
                     /EC_number="1.3.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate-dihydrodiol/cinnamic
                     acid-dihydrodiol dehydrogenase"
                     /protein_id="HCS1955544.1"
                     /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
                     SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
                     ETLETGFHELFNVNVLGYLLGAKACTPALIASEGSMIFTLSNAAWYPGGGGPLYTASK
                     HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
                     PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
     gene            41229..42246
                     /locus_tag="OQQ57_000676"
                     /pseudo
     CDS             41229..42246
                     /locus_tag="OQQ57_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpropionate dioxygenase ferredoxin
                     reductase subunit"
BASE COUNT         9990 a        11696 c        10624 g         9983 t
ORIGIN      
        1 gctaataatc aggaggagtc atgaagaaag tttttctttg cgccatcttg gcctccttaa
       61 gctatccggc tatcgcctca tcattgcagg atcaactctc tgctgtagca gaagcggaac
      121 agcaaggtaa aaatgaagag caaaggcagc atgacgaatg ggtcgcggag cgcaacaggg
      181 aaatccagca agagaagcaa cgtcgcgcaa atgcccaggt cgccgctaac aaaagagcgg
      241 caacggcagc agcaaataag aaagctcgtc aggataaact ggacgccgaa gcctctgcgg
      301 acaaaaaacg cgatcaaagt tatgaagatg agctacgcag cttagagatt cagaaacaaa
      361 aactggcgct ggcaaaagaa gaagcccgcg ttaagcgaga aaacgaattt atcgatcagg
      421 aactgaagca caaagctgcg caaaccgatg tggtgcaatc tgaagctgac gccaacagaa
      481 atatgactga aggcggtcgc gatctgatga aaagcgtggg caaagcagaa gagaacaaat
      541 cggacagctg gtttaattaa tcgatgttag taacttcaag cctatgattc ttgaagataa
      601 aaaaccctct gtagtaacag agggttttgt tcattcatag tgcagggatt aaaatcattc
      661 ccactcaatg gtagctggcg gcttgccgct gatgtcatac accacgcggg aaataccgtt
      721 cacttcattg ataatgcggt tggaaacgcg accgaggaaa tcgtacggca gatgcgccca
      781 gtgtgcggtc ataaagtcga tggtttcgac agcacgcaga gagacaaccc agtcatactt
      841 acgaccatcg cccattacgc caacggaacg taccggcagg aacacagtga acgcctggct
      901 gactttgttg tacaggtccg ctttacgcag ttcttcaatg aagatggcgt cagcacggcg
      961 cagcaggtca cagtactctt tcttcacttc acccagcaca cgaacgccaa ggcctggtcc
     1021 cgggaacggg tgacggtaca gcatgtcgta cggcaggccc agctccagac caatcttacg
     1081 cacttcgtct ttgaacagct ctttcagcgg ttcaaccagg cccatcttca tctctttcgg
     1141 caggccgccc acgttgtggt gagatttgat gacgtgtgct ttaccggttg cagaagccgc
     1201 agattcgata acgtcagggt agatggtgcc ctgcgccagc cacttcacgt cttccagttt
     1261 cagcgcttct tcatcgaaca cttcaacgaa aacgcgcccg atgattttac gttttgcttc
     1321 cggatcgttt tcgccagcca gcgctgacag gaagcgatct tctgccggta cgtgaacaat
     1381 gttcagacca aagtgatcgc caaacatatc cagaacctgc tctgcttcgt tgagacgcag
     1441 caggccgttg tcgacgaata cgcaagtcag atttttaccg atagcgcggt gcagcagcat
     1501 tgcggttacg gaggaatcca caccaccaga gaggccgagg atgactttat cgtcgcctac
     1561 ctgctcgcgg atgcgagcta cagcatcgtc gataattttc gctggcgtcc acagggcttc
     1621 acactggcag atatcacgca caaaacgctc cagcatgtgc ataccctggc gggtgtgagt
     1681 cacttccggg tggaactgta cgccatagaa gcgtttttct tcgttagcca taatggcaaa
     1741 cgggcagctt tcggtgctgg ctacggtgac gaagtcggac gggatagcgg taactttatc
     1801 gccgtggctc atccagacat cgagcagcgg tttaccgtct gcggtcagcg catcttcgat
     1861 accgcgaacc agtgcgctgt cgtttacgac ttcaacctgc gcgtagccaa attcacgttc
     1921 gttagaggct tcaacgtgac cgcccaactg cattgccatg gtctgcatgc catagcaaac
     1981 gccgaatacc ggtacgcctg cttcaaagac atactgcggc gcacgcggac tgttttcttc
     2041 agtagtactt tccgggccgc cggaaagaat aatgccgctt ggattgaagt cacgaatttg
     2101 tgcttctgtc acatcccacg cccacagttc gcagtaaaca cccagctcac gcacgcggcg
     2161 cgcaaccagt tgagtgtact gagaaccgaa gtccagaatg aggatgcgat gcttatgaat
     2221 gttttccgtc attgacgctt attccgaggc aagtgaaaca gataatataa atcgcccgac
     2281 atgaagtcgg gcgaagagaa tcaggagccc agacggtagt tcggggactc tttagtaatg
     2341 gtcacgtcgt gaacgtggct ttcctgaatg cccgcaccgc tgatacgtac aaactccgct
     2401 ttagtacgca gttcgtcgat agtaccacag ccggtcaggc ccatacagga gcgcaggccg
     2461 cccatctgct ggtgaatgat ctctttcagg cgacctttat aggctacgcg accttcgata
     2521 ccttccggca ctagtttgtc ggcagcgttg tcactctgga agtaacggtc agaagaacct
     2581 ttggacatcg cacccagaga gcccatacca cggtaagatt tgtaagaacg gccctggtag
     2641 agttcaattt cacccggaga ttcttcagta cccgccagca tggaacccac cattaccgcg
     2701 cttgcgccag cggcgatagc tttggcgatg tcgccggaga agcgaatacc accatctgcg
     2761 ataaccggaa tacctgtgcc ttccagcgct tcaactgcgt cagcaacggc agtgatctgc
     2821 ggaacaccta cgccagtaac gatacgagtc gtacagatag aaccagggcc gataccgact
     2881 ttaaccgcgc tgcaaccagc ttctgccaaa gcgcgtgcac ctgcagctgt tgccacgttg
     2941 ccgccgatga tttgcagatc cggatattta gcacgggttt cacggatacg ctgcaaaacg
     3001 ccttctgagt ggccgtggga ggagtcgatc agcagaacgt caacgccagc ggcaaccagc
     3061 gcgtcaacac gctcttcgtt acccgcacct gcgccaactg cagcaccaac acgcagacgg
     3121 ccttgctcgt ctttacaggc gttcggttta cgttccgctt tctggaagtc tttcacggtg
     3181 atcatgccga tcaggtggaa ttcgtcatca accaccagcg ctttttcaac gcgtttttcg
     3241 tgcatttttg ccagcaccac ttcacgggct tcaccttcac gcacggtgac cagacgctct
     3301 ttcggcgtca tgtaaacgct aaccggctgg ttcaggtcgg taacaaaacg cacgtcacga
     3361 ccggtgataa tacccaccag ttcgttttct tcggtaacaa ccggatagcc cgcaaaaccg
     3421 ttacgctcgg tcagttcttt cacttcgcgc agcgtcgtgg ttggcagaac agtctgcgga
     3481 tcagtcacca caccagattc gtgttttttc acacggcgaa cttcttctgc ctggcgttca
     3541 atggacatgt ttttgtggat aaagccgata ccgccttcct gagccagagc aatagccagg
     3601 cgcgcttccg ttacggtatc cattgctgcg gaaagcatag ggatattcag acgaatagtt
     3661 ttcgtcagct gggtgctgag gtcagcagta ttcggcagaa cggtagaatg agcaggaacg
     3721 aggagaacgt cgtcaaacgt cagagcttct ttagcgatac gtagcatggg caatatctcg
     3781 accagagtgg ttaataaata ttgccgcggc attatacaga gcgtaaccga ttgcatctac
     3841 ccctttttgc aaaaaatgct tgctatcccc gaagggcggg ttactatcga ctgaataacc
     3901 tgctgattta gaatttgatc tcgctcacat gttaccttct caatcccctg caatttttac
     3961 cgttagtcgc ctgaatcaaa cggttcgtct gctgcttgag catgagatgg gacaggtttg
     4021 gatcagcggc gaaatctcta atttcacaca accggcttcc ggtcactggt actttacact
     4081 caaagacgac accgcccagg tacgctgcgc gatgttccgc aacagcaacc gccgggtgac
     4141 cttccgtcca cagcatggac aacaagtttt agttcgcgcc aatattacgc tctacgagcc
     4201 gcgcggtgac taccagataa tcgttgagag tatgcagccg gccggtgaag ggctgctgca
     4261 acagaagtac gaacagctca aagcgaagtt gcaggctgaa ggtttgttcg atcagcaata
     4321 caaaaaacca cttccctccc ctgcgcattg cgttggtgtg atcacctcaa aaaccggtgc
     4381 tgcgctacat gatattttgc atgtgttaaa acgtcgcgat ccttctctac cggtgatcat
     4441 ctaccccacc gccgttcagg gcgatgacgc accggggcaa attgttcgcg ccattgaact
     4501 ggcgaatcag cgcaatgagt gcgacgtgtt gatcgttggg cgcggcggcg gttcgctgga
     4561 agatttatgg agttttaacg acgaacgcgt agcgcgggcg atttttgcca gccgcattcc
     4621 ggtcgtcagc gccgtcgggc atgagacgga tgtgaccatt gccgattttg ttgccgatct
     4681 gcgtgcgcca acgccgtctg ccgccgctga agtagtgagc cgtaatcagc aagagttact
     4741 gcgccaggtg caatcgaccc gtcaacggct ggagatggcg atggattatt atctcgccaa
     4801 ccgcacgcgt cgctttacgc agatccatca ccgattacag caacagcatc cgcagctccg
     4861 gctggcacgc cagcaaacca tgcttgagcg cctgcaaaag cggatgagct ttgcgctgga
     4921 aaatcaactt aagcgtaccg ggcaacagca gcagcggtta acacagcggc tgaatcagca
     4981 aaatccacag ccgaagattc atcgcgcgca aacgcgcatt cagcaactgg aatatcgttt
     5041 agcagaaacc ctgcgcgtac agcttagcgc cacgcgtgaa cgtttcggta atgcagtaac
     5101 gcacctcgaa gccgtaagcc cactgtcaac gctggcgcgt ggatacagcg ttactactgc
     5161 tactgacggc aatgtactga aaaaagtgaa gcaagttaaa gcgggtgaaa tgctaaccac
     5221 acgtctggaa gacggctgga tagaaagtga agttaaaaac atccagccag taaaaaaatc
     5281 gcgtaaaaag gtgcattaag ccagcacgaa ttcaacgcgt tttttcgata tcaagccatg
     5341 cccgtgctga cagaagtaat ctactgcacc gcaggctttt aacacctgca acggttgatg
     5401 gcagtctgga caaagagctt tcatttcaat aatttccccg caggatgggc aacgcgcatg
     5461 gccgttatcc tgatcaagca catgctgaca ttgtggacaa tgcagttcca tatgaattcc
     5521 tccggtagcc atccctctac attcatagag ggaatggcag ataaaatact tacggataat
     5581 tatttatttt tcttgatgtg cttcatcaga cgcttacgtt tacgcatctg ggttggcgtc
     5641 agggtgttac gcttgttcgc atacgggttt tccccttctt tgaactgaat acgaatcggc
     5701 gatcccatta cgtccagcga tttgcggaag tagttcatca agtagcgctt gtaggaatca
     5761 ggcaggtctt tcacctgatt accgtgaatc accacaatcg gcgggttata accaccagcg
     5821 tgggcatatt tcagcttcac acgacgaccg cgtaccagcg gcggttggtg atcttcaaca
     5881 gccatcgtca tgatgcgcgt cagcatagag gtccccacac gacgggtgga gctgtcatac
     5941 gcttcacgta ctgattcaaa caagttacca acaccactgc cgtgcaaggc agagataaag
     6001 tgcacacgag caaaatcgat aaagcccaga cggaagtcca gcgtttcttt cacctgctct
     6061 ttcacttcct ggctcaggcc atcccactta ttcaccacaa tgacaagtga gcgcccacta
     6121 ttgagaataa agcccagcag cgagagatcc tgatcggaaa taccttcgcg cgcatcaatc
     6181 actaacatca ccacgttggc atcttcaatg gcctgcaacg ttttgattac ggagaatttc
     6241 tctacagcat cggtgatttt gccgcgttta cgtacgccag cggtgtcaat gagcacatac
     6301 tcacgtccat cgcgttccat tggaatgtag atactgtcac gcgtcgtgcc aggcatgtca
     6361 taaacaacaa cgcgctcttc accaagaata cggttagtga gtgtagactt acctacgttc
     6421 ggacgaccca caatcgccag tttgatcggc agactttgcg ggtcgaagtc gtcttcctct
     6481 tcttcttcgc cgttctcttc cacttcaaat tgcgcccagt attcagcgtc ttcgtcgact
     6541 tcctcttgcg gtgcgagatc ttccatccac ggcagcagca catgctccag cagacttaat
     6601 acgccacgac cgtgagacgc ggcgatcggg tagatttcac ctaagccaag cgagtagaaa
     6661 tcaaccactg cctgatcggg atccagaccg tcagttttgt ttgccaccag gaaggtcggt
     6721 ttttcacggg agcgcagatg tttggcaatc gcttcatctg ccggcatcag gcccgcgcgc
     6781 gcatccacca taaacagtac gacgtccgct tcttcaatcg ccagcagcga ctgttccgcc
     6841 atgcgggttt ctacaccgtc ttctgtgcca tcaatcccgc cggtatcaat acagataaac
     6901 tcacggcctt caatttccgc acgaccgtac ttacggtcac gagtcagacc cgggaaatcc
     6961 gcaaccagcg catctcgggt gcgagttaga cggttaaata acgtggattt tcctacgtta
     7021 gggcgcccga caagcgcgac cacaggtacc atgtttaaag cctcattttt ataaatcatc
     7081 agacaacgca cgctatattc gcgtcgttgt taaaaacagg aaaacggccc ctgtccagga
     7141 gccgttttca aagtgaacga cagagacgat taacgtgtaa tagagtacac ggttccgtct
     7201 tttgcctgga tcagcagttt gccgtcagcg gcaaccggtt cagtctggaa accggaacta
     7261 tcaacttttt gctgggcaac gaaacgacca tcttcgacat taatccagtg cagataacct
     7321 tcactgtcac cgaccaccag gttgccatca tacagcaccg gagaagtcag caggcgatgc
     7381 aacagatcgc tttgtgtcca cagcgtaacg ccgccatcaa tggtcaacgc catcacccgg
     7441 tcattttgat cgaccagata gatgcgattg ccgtcgacga tgaaatcatt caccgaaccc
     7501 agttcgcgtt tccacataat ctgaccactg cgcagatcaa gcgccgtcag gttaccatta
     7561 taggccagcg cgaaaacaac gccgttaaca acgacgggag tcgtgtcaac atcgctcaga
     7621 cggtcaattt cggtagaacc ggtcgcctgg gaaatacgct gctgccaaat catctggccc
     7681 tgttccatca gcactgcgct gacgcgacca ttatcgcccc ccacgacggc cgcaccaaaa
     7741 gccgttgccg gcgcagactc gccacgcaaa gagagcgaag gcatatcgag gttaactgtc
     7801 catttgacag cgccgtcagc ttcgttcagc gcttgtaact gaccgttact ggtgtggatt
     7861 aacaccagac cgtcgctgac caccgggcgc gaaagtgctt cacccgcgac tttagtttgc
     7921 catgccacag taccatcgct ggtattcagc gcgtaaacct gcgccttttc gctgccaatg
     7981 tagacatgcc caccagacac ggtcacaccg ccagaaagta atgcaggctc tttagagaac
     8041 cagccatctt tctcggccag gctgacagac cagatttctt tgccatcatc cgcattcagc
     8101 gcttttacca aaccagcgcg gtccgctgca tagacaacgt tgtccgccag tgccggatga
     8161 agattggaat agaagttgcc aatgccgcta ccaacggaag tactccacgc cgtggtcggc
     8221 gtaaactggt tttcaacggt tggcaatggg gacatcttta ccacatcttc ttcgctgtta
     8281 aacagcgaac agccgcttaa aagggtaacg gaaagcagtc ctggcagcag taatttacgc
     8341 aattgcatcg ggtccctctc agatggacaa attattaatt ttcatctgca tcatttcgct
     8401 cagtgccgga gtaacatcgc ttttcacgcc tgcttcccat gcactacgcg caccttgctt
     8461 atcacctttg ctcagcaatg cttcaccacg caggtcggca acaatggcag cccacccttc
     8521 acctttgatg gtatcaaggg ttttcagcgc ggcatcagcc tgcttgagct gtacctgaac
     8581 gcgagcaaga cgcagattta tcacggcttt gagattttca tcgctcgtgt ctgccagccc
     8641 ctgttgtaac tgggcggcag ctttctctag ttcatttttg tcaacaaatt gctgcgcaag
     8701 ttccaaagaa gccagcgcac cataagtatt tttattttca gcagcaaatt tttccgccgc
     8761 cgggatgcta tccggtttgc cttcgctcac tgcggtaacc gcattttgat aggcaagaga
     8821 agcggagcgt gcagaatcaa cctgatggct gttccagtag cgccagccaa tcagtgcgcc
     8881 aacgcccaaa atcaccccaa cagccagtgc tttgccattt tcagcaaaaa agcgtttaac
     8941 cgcttctacc tggtcgtttt cgttctcgta aatttccacg ctgtccttct ccttccttaa
     9001 cccagtaacg tgcgcaaatg cgcggctacg ctatcctgcg caactgccgt ttgctcacca
     9061 gagcgcaaat ccttcactac tgctgtgccg ttagtcactt cagactcacc cagcaccaca
     9121 gcaacgcggg caccccattt atcagcacgg gcaaactgtt tcttaaagtt gccgccgccg
     9181 tggttggtca tcaatttcac gccctgtaat tcatcacgca gacgctcagc taatgccata
     9241 gccgcagatt gtgtatcagc acctgaagcc accaggtata tatcgacaat aggatcggct
     9301 ttaaattccg gattaacggc ctgtactaac aatacaagac gttcgaggcc catcgcaaaa
     9361 ccgacagccg gtgttgcacg accgcccagt tgttccacaa gaccgtcata acgaccgcct
     9421 gcacacacgg tgccctggga gccgagactg ttagtcaccc actcgaaaac ggtacggtta
     9481 tagtaatcca gaccacgcac cagacgctgg tttacggtgt aagcgatccc cgcgctctca
     9541 agcagtttgc acagaccggc aaaatgctca cgagattcct cgtccagata atcacctaat
     9601 gccggagcgt cgttgagaag cgcctgcact tccggatttt ttgaatccag cacgcgcagc
     9661 gggttagtgt acatgcggcg tttgcagtct tcgtccagct tttctttatg ctgctcaagg
     9721 aatgccacca gcgcatcgcg gtaattggcg cgtgcttcca gcgaaccgat agaattcagc
     9781 tcaagagtta cgtgttcgga aatacccagc gcgcgccacc agcgggcggt gagcataatc
     9841 agttcagcgt cgatatccgg accttgcaga ccgaaaactt cgcagcccaa ctgatggaac
     9901 tgacgataac gccctttctg cggacgctcg tgacggaaca tcggcccgat ataccacaga
     9961 cgctgttcct gattgtacag aagaccatgc tcgatgccgg cgcgtacaca gcccgccgtc
    10021 ccttcagggc gcagagtcag gctgtcgcca ttgagatcct caaaggtgta catctctttt
    10081 tcaaccacgt cggtgacttc accaatcgca cgtttgaata gcggggtctg ctctacaatc
    10141 ggcaagcgga tttcactgta accgtagctg ccgagcacgt ttttcagtgt gccttcaatg
    10201 cgctgccaga tggccgtttc gccaggcagg taatcgttca tgccgcgaat ggcttgaatg
    10261 ttttttgcca cgtttattct ctttctgaat ataaaaatga accctcaacg cttccctcaa
    10321 tgtttgggga gccatgcggg ttcaatcata cacgggaagc gaggcgcttc ccatcacgtt
    10381 attatttttc aacctgctga acgtcaattc gacgcgcttc atccagctga ctggctttcg
    10441 cacgaatgcg tgcttccagc tggtcgatca tatcgttgtt gtccagacgg tctttgcgca
    10501 cgccatcttc atagaggccg cttttcttgt tgccgccggt gacgccgagt gtagaaacca
    10561 gcgcctcacc tgggccattc accacgcagc cgataataga aacgtccatc ggagtgatga
    10621 tatcttccag gcgttgctcc agcgcgttaa ccgtaccgat aacatcaaat tcctgacgcg
    10681 aacaggtcgg gcaggcgatg aagttgatcc ctcgcgaacg gatacgcagc gatttcaaaa
    10741 tatcgaaacc gactttgatc tcttcgaccg gatcggccgc cagcgatacg cgcagcgtgt
    10801 cgccgatgcc ttcagacagc agcagaccta aaccaatggc ggattttact gccccgctgc
    10861 gtgcaccacc ggcttcggtg atccccagat gcagcggctg atcgatctgt tttgccagca
    10921 aacgataaga ctcaacagcg aggaagacgt cagacgcttt cacgctgact ttgaactgat
    10981 cgaagttcag gcgatcgaga tgatcaacat gacgcatggc ggattccagc aacgcctgcg
    11041 gcgtcggttc gccatacttt tcttgcagat ctttttccag cgatccggcg ttaacgccaa
    11101 tacggatcgg aatgttttta tcgcgcgcac agtcaaccac catgcgaata cgctcttcat
    11161 taccgatatt gccagggtta atacgcagac aatcgacgcc gtattccgct actttcagcg
    11221 caatgcgata gtcgaagtgg atgtcagcca ccagcggcac gttaacccgc tgtttgatga
    11281 gtttgaacgc ttctgccgcg tccatcgtcg gtacggagac acggacgata tcagcgccaa
    11341 cgcgttccag cgccttgatt tgattgaccg ttgcttcgac atctgtcgta cgcgtattgg
    11401 tcatggactg tacggcgatg ggagcaccat cgccaatcgg cacattccca acgtaaatac
    11461 gtgttgattt tctacgttga attggagcct ggttatgcat gaaaaatctc ccgcgttacc
    11521 cgtctgttac tgcgccggtg attgttcggc attgagggtc agacgcgcaa cctggttagt
    11581 tctgataaaa cgactcagat cgacaggttt cccttgatac tggatctgta ctgcggctgg
    11641 cgcaccaatt ttcagtttgt acggtgcctg gccggttaag ttcaaattac cgtctttacg
    11701 ctgcataccg ctaaacaatt ttttaccggt agcatcagtg acctccagcc agcaatcggc
    11761 agtaaagttc atcaccagcg cattcggatc agccaccggc gtggtcacgc cagcctgatc
    11821 ggttggcaac ggcgcagcac catctggcgt tgttgctgcc gttggtgccg gggtcgcggc
    11881 ggtatcaaca tttgcctgcg aaggcgaaac aaccgcattc tgttgcggat caacagctgg
    11941 tgctggcgca gttacggcag gtgtttgcgt gttggttgcg gtagtatcca cagacgctgg
    12001 cggcgtggac gttgtagccg ggtctgtagt tgtcgacgta tttaacggaa cactctgccc
    12061 ctgctcgcta ttactgctca gttccgccga agattgatcg gccatagtgg tgatctcttc
    12121 ctgctgagct ttgtggtctt gccaccacca ggcaccgctc aggccgataa ccacaaacaa
    12181 caccagccag gtgaaggtca tcagccagcc gtcacgtttt ttgcggcgtt taccgaggga
    12241 aaaactctgc atcggcgcaa ctttcgcagc ccgtagtgga gcctgctttt ccagccctag
    12301 cagcagttct tcttctggaa tatgtaccag acgcgcataa gagcggatat atccgcgcag
    12361 gaatgttgaa gcaagatcgg cgggtgcctt atcttcttca atgtcgcgta ccgtggaaac
    12421 cttcaggcaa agtcgctcgg caacggcctg ctgactaagt cctagttgtt cgcgagcatt
    12481 acgcaggcga gcgccggtag taagtgcttc attttggtcg tgcgtggctt cagtattcat
    12541 tcgctgcagg tacgtttaaa tgagaattga gatgccggtg aaccatcatg ctcacccaca
    12601 ccgcgaaaca tccgttaagt taaccgttat catacagtat aagaccgtct gtgtgctcgt
    12661 gacaaagccc acattcacta aggctaactt actgttgcat cgttacatac tgccttaaag
    12721 tcagcaaaaa cgcaccgtta atattgacca gacaattgca acttaatact tcattcataa
    12781 aagattacgc cacggtacat aaagtaaccg tggcgtaatg gctatcagac cgctttaatg
    12841 tcgatggctt caccctgcat ccgtttacgc agggtacgtt tcgtacggtc gataacatcg
    12901 cccgccaact gaccacaggc agcatcgata tcatcaccac gagttttacg cacaatagtg
    12961 gtgaaaccgt agctcatcag cacttttgag aaacggtcga tacggctgtt cgaactgcgt
    13021 ccatacggcg cgcccgggaa cgggttccac gggatcaggt tgatcttaca cggcgtatct
    13081 ttcagcagct ccgccagttg gtgcgcgtgt tcagtgccgt cgttaacgtg gtcaagcatc
    13141 acgtattcaa tagtgactcg gccctgattg gcgttggatt tctccagata acggcgcacc
    13201 gcagcaagga acgtttcgat attgtacttt ttgttgatcg gcacaatttc gtcacgaatt
    13261 tcgtcgttcg gcgcgtgcag ggaaattgcc agtgcaacgt cgatcatatc gcccagttta
    13321 tccagcgccg gaactacacc ggaagtagaa agcgtgacgc gacgtttaga caggccaaaa
    13381 ccgaaatcat ccagcatgat ttccatcgcc ggaacgacgt tgttcaggtt gagcagcggc
    13441 tcgcccatgc ccatcatcac tacgttagtg attgggcgct gaccggtgac ttttgctgcg
    13501 ccgacgattt tcgccgcacg ccacacctgg ccgataattt ccgacacccg caggttgcga
    13561 ttaaagccct gctgggcggt ggaacagaat ttacactcca gcgcacaccc cacctgcgaa
    13621 gagacgcaga gcgtggcacg gtcgtcttcc gggatataca ccgtttcgac gcgctgatcg
    13681 ccaacggcga tcgcccattt aatggtgccg tcggatgaac gctgttcttc aaccacttcc
    13741 ggtgcgcgga tttccgccac ctctttcagt ttgccgcgca acactttgtt gatgtcggtc
    13801 atctcatcaa agttgtcgca gcaatagtga tacatccact tcatcacctg atcggcgcgg
    13861 aagggttttt cacctaaatc tttaaaaaac tcccgcatct gctgacggtt gagatccagc
    13921 aggttgattt ttccatcttt cgtggtgacg ttttcaggtg tgactaattg ttcagacata
    13981 tgctattccg gcctcgttat tacacgttat ggcccctgga gggttgaaaa aagaaacgcc
    14041 ccggtgagcg gctgctcgtc cgggggcgct gcattgtaca aattctggcg cacggatgcc
    14101 acgtttgcac gcggcattta cgaaattatt aacgggtgcg cgggcacact tcgccttcgc
    14161 caaagaaata agcgatttcg cgagcggcag attcgacgga atcagaaccg tgggtaccgt
    14221 tttcggtcag gctgtcagcg taatcagcgc gcagagtacc agccagtgcg tttgccggat
    14281 tggtcgcgcc cagcagatcg cggtgacgct gaacggcgtt ttcaccttcc agcacggaaa
    14341 ccacgatcgg gccagaggtc atgaattcaa ccagaccatc aaagaacggt tttccatcgt
    14401 gttcagcata aaagccacgt gcctgttcaa cggtcaggtg cagcattttg gtgccgacaa
    14461 ttttgaaccc tgcagcttca aagcgcgcaa agatattacc aatgacgttt tttgctaccg
    14521 cgttcggttt gatgatggaa aaagtacgtt caatagccat ttttacctct gtaaattgtt
    14581 ctgttgttgt ctgtaccagc gtacgagatg gcgcggatta taatgagcaa cagggccgtt
    14641 gactattgat gaaggtaaca tttttttaaa ataaaatgag ttttagcaac aatcagggac
    14701 aaaacagact attgcatgac aaatttcact gtcgcgattt gccccacgtc atccatcacc
    14761 agcaattgat aatcaccttt atccgtcaaa tgcagggtca cgttgcgccc gcgttcagtt
    14821 aacggttcgc cattcagaaa ccaccagcgt tcacctgccc ctccacttga ttgcaacggc
    14881 aaagtcgctt ccgctgcgcc cggtaaacgt ttaataatcg cgccatcgcg aacgcctgtc
    14941 agctgcagcg ggagctgggc atagtgaccg tatggcgggc aacttgtcga ggccggtggt
    15001 aagcgcacag cgcgacgttc tgatgcgggc agccagggtt ccagcggtag cggccagaca
    15061 tttatcattt cttgtcgcgc ttgcgggcaa tcagcggcaa cacgtttgcc attttcatcc
    15121 agccagatgg ggaaacgaat gccattaatg ccttcctgct ccggcagtaa tagagttggc
    15181 ggctgactcc cgtccagcag ccaggttgcc aggcggcggc gacagttacc gtcaccttcc
    15241 ggcaaagact gtccgcccgg ccagcagata acgccacgag tgactgagtt cgggcgcggg
    15301 tcttccggca gattcgcact gcgcgacagt aagatattat tgacctgatt caacaatggt
    15361 acggcactgg caaagccaaa ctgaccaaca acgggcgtgc agtccggtct gccagtccag
    15421 atcccaatga catagcgagc gttaacccca atcgcccagg cgtcacgata accatagctg
    15481 gtgcccgttt tccatgccag tggggcgacg cgcggcaagg cactatccgg caagggttgc
    15541 gcttcatcag ccataatccg gcgaatgatc cacgccgccc ccgacgacat taaaggccat
    15601 tcaagcagcg gatcgtcagg ctgtaagcgc aatttgcctg ccttgccgtg gcgagcaaac
    15661 gcggtatacg ctgccgccat atcttccagt tttgcaccag cgccgccgag aatgagtgaa
    15721 agattcggcg cagcaccgtt gggcaaatat aacggcaatc caacattgcg taactttgcc
    15781 gcaaaccgtt tcggtccata ggcttccagc acctgcacag caggtaagtt cagcgagcgc
    15841 accagcgcct cgctcatgct gatcgggcca tgaaaaccgc tatcaaagtt acctggtcga
    15901 taatcaccgg tgcgccgggg gacgtcttgc agcagtgatg ccgggtggat caagccttca
    15961 tccagcgcca gaccataaac aaacggtttg agcaccgatc ctggcgatcg gatcgcattg
    16021 accatatcaa catgaccaaa gcgtgaatca tcgttgagat caaccgatcc cacccagccg
    16081 cgaacacgca tatcggtatg atcaaccacg atcatcgcca gtgagctgcg cggtggcaac
    16141 cgccctttcc agttttgcgc cagttcttcc agacgtcgtt gaagaccggc atccagcgta
    16201 gtaacgattt tgtcgctttt gcttttaccg agcatcatgc gcgaaaacag cggtgccagt
    16261 tgcggcattt gtcggggtgc cagccagatg ggttcttccc ttgactcttt tacctgctca
    16321 cgggaccaca caccttgcac ggccatccgt tcgagcactt tattacgcgc ggcttcggca
    16381 cgctccggcc aacgatccgg gcgcagtcgg ctgggcgctt gcggtaacac cgccagcatt
    16441 gccgcctcgg aatagcttaa attcgcaggc gattttccga gataagccca acttgccgca
    16501 ccgatcccct gcaacgtacc gccaaacgga gcgcggttaa gatacaagat cagaatttca
    16561 cgcttagaca aatgccactc cagttgcaac gcgcgccaga gctggagaat tttgccacca
    16621 aatgttttgg ggtgaggatc aagcagacga gcaacctgca tagtgagcgt gctgccacca
    16681 gaaataaccc gtcccgaagt gagatcttgc catgctgcgc gcgccaccga gaatggattc
    16741 acccccggat gcttccagaa ccagcgatct tcataattga tcagcgcttc aaggtaacgt
    16801 ggagacacat cttcgattgt taccggataa cgccagatgc catcagcatc ggcgaagcgc
    16861 cagagcggcg taccatcctg cgccacgacc actcgtgcgg gattgacttc atgcagcggt
    16921 agaggccaga gtttatctgc tccccacgct gcaagaaaaa ggagaaatgg cacagctgcc
    16981 agcgttatcc agcagccgcg tttggttaac aagcgaagca tttacggtcg gacaatcagc
    17041 agatcttcag ccgcgccggt cgcccgccat tggggaacat acattgattc caccatcggt
    17101 tgcggtacct gatacgttcc cggcgtcacc gcccgcgcca gatacaccag cgttaccggt
    17161 tggtattcat caacggcaac cgccgccaca aagcgatcgt cacggaactc aatgtgctta
    17221 atgctcgcct gctgcatctg gttcagtaag ttttgcactt cgtcaccact ttgctccagg
    17281 ctggcgctac cgttcgccag attctgattt tccagttcca gacccgcagg cagcagatcc
    17341 acgactaacg catccggcac gctgttactg gcttttacct gcaaccagac cagcaccaga
    17401 tcgccgctac gtaacgagtc cagcgatttg ctcttaccat cagtaccaag aatatgacgc
    17461 tcgatttgca gcacattgtt cgccggtaaa ggtgcggatt gcggataacc gctggcatcc
    17521 atacgcaacc ataacggctg atcgccactg tttctcacct gcaaggtggc aagttgatcg
    17581 ctattcagat tgctgtttag cgttttctcg cctgtcagcg gctcagctga gaaagaggtt
    17641 tgcgcctgcc atttacccgg taaatcctga atcgtagggg cagccaggaa caacgcgtta
    17701 ctttcctgcg tcgatagcca gcgttcacca aacgcctgct gcgaaagtgt gttcagcaaa
    17761 gtgtactgct catcgggtag cagtttattt tcttccagca aggagagcat taacgcgttg
    17821 tcgcgcagtg gactaccgta atcacccagc catatccgct catcactatt tctcggcgtt
    17881 ttcagcgcca gcacaatcgc ttcttcacca cgcgttgcat cacccatggt tttcagcgca
    17941 atgccaagtt gcagcagcgg taaaccagaa gcggcatctg cacgatgctc ccagatttca
    18001 cgcagcgcac ccagtggtgc tttttgctga cgggccagca ccagcgcagc gtaagactga
    18061 acggcgaatt tactggcttt gagattatcc gcgtacggga tcgacatcat gcccggatct
    18121 tgtaaatagc gcagcagacg ctcattaccc cggttaatgg cgtctgtcgg cacgctgtaa
    18181 ccctgttcgc ctgcgcggac caggaaatcc atcacgtaag ccgtcagcca gtactcttcg
    18241 tcaccgtttt tatcccacag cgcaaagccg ccgttatcac gttgcatttg cagcaaacgg
    18301 gaaatgccga tatcgaccga tgcacggcgt ttctcatcac tgtcgccttt gatgcccaac
    18361 gcctgcagtt gggctgcgtt ggtataaagt gacgggaaca ggccgctggc ggtttgctca
    18421 agacagccgt acggatacgc ttttaactct ttgatataac gtgcaatgtt cagcggtggt
    18481 ttgccgctca acaacaattg cccttccagc gtaacaggcg agaagttttg caatccatcc
    18541 gccggaatcg cccatgtctc accaggctgt aacgccgtac cgtaattaac cgtttgtgcc
    18601 gggaacgccg gacggacgcc gattttccac tgcttatgct gatcggcaac ggtttcaccc
    18661 ggtaacgcta acccgctaat ggtggcctga atttctccat cgccataacc cggcaatgct
    18721 cgcaccggga taaacagcgt agtacgcaca cctggcgcta attcaacggc tgcgggtgaa
    18781 tcgctgacca gttcaagcaa accactggcg gtcagggcaa cgttcagttt ttgcggttta
    18841 tcggtaagat tagtgatatc cagcgtcaga cgcgaggtat cgccactcgc cataaagcgc
    18901 ggcatgttca gttcagcaat caccggtgcg gcaactatca ctttgctttc gttgctaccg
    18961 aaatcatctg ccgtccaggc ttgcgccatg acgcgcaatt caccgttaaa atcgccaatc
    19021 ggcagtgtaa ccgagccttc gccctgttcg ttgagcgtta ccggcagcgc ctgctgcgcg
    19081 acaatattga cgtgattgac cagcggttta ccaccacgtt tcagctcatc accatcgcca
    19141 ccgaaacgca gagctgccag acgcccctga ccttcaataa cctgaccgta aatatcgtaa
    19201 atgtctgcgc catagcgttt ctgaccaaag aacgcctgcc acggatctgg cgtgacgtag
    19261 tcagtaatat tcagcacacc actatcaacg gcagacacca gcacattcac ctgtttaggc
    19321 ttctcgccat ttttagtgct ggctttaatt ttcacggtta atggttgatt gggacgcatt
    19381 tttgctggtg tttccagcgc cagatcgagg cgacggtttt catcgccaag cggcagatgc
    19441 aacacaccaa ccgcgcgttt tggcgtcgcg gagcgagatt tatcgctagg acgtaccacc
    19501 agcgtactta aatacagatc atgacgattc caggttttat cgaccggaat cgtcagatcc
    19561 agcccttgag ccggaacatc aatctcttgc caccacagcg gcccttcact ggactcgacc
    19621 atcgcataac ctttacccgc cgttggcgcg gcgatatgca acttaatggt gtcgccaggg
    19681 cgataactgg ctttatccag tttcagcgtg acacggtcgg gtcgcactgc gccgctaccg
    19741 tcgctgttgt cctgccagct atagccagcc cagaaacgaa cactactgac cgcttcattc
    19801 ggcgctttga cttccagacg ataagcgccc cactctaccg gaaaactgac cttgccggtt
    19861 tcgtccgctt tcagatccag agtttgttca ttttcgatca gatctttttg atcaaactgt
    19921 gactgccagc cttcatcttc tgaccagttc cagtagtaat cgcggcgttc gcgaatcagg
    19981 cgcacctgca agcccgacac ggcttttttc acgccttgtg catcgctata aacgatgtca
    20041 aaagcggcgt tactgccttc atcaacaatg ggctgtttca ccgtgctgtc agtgcgataa
    20101 tcgtaaaccg atttcaaggc gaactgcgga cggagccccg gcaatgcatt ggcaggccag
    20161 atagcctgct cagcgcggcg cgtcaccggg cgaccgcccg attccagcaa actgccctgg
    20221 aaaataacct gcaatgggga atgcgtttcc ttccactggc tttctgtaga aacttcgccg
    20281 cgccctttat catccagcgt caactgaact tcatccagcg tgcgggaaag gttttcggca
    20341 gctatatcgc cgaattcaaa accaggtaag gctgacacag cctcacgcag tgggcgcagg
    20401 aaaagttgcc cttgcaaagt attaccatta gcaggcgcac cgtacaggta gtatcccacc
    20461 acggagaatt tcacttcatc attcggcgta agcggggttt tctcaccggt cagattcagc
    20521 gccatacgct ctggcataaa atcttcgacg tggaaatccc acatccggta ctggttatcg
    20581 cccgtgttgg cgcgaatatg ccacataccg gttgccgcat tgctatcgag tggccaggta
    20641 aagtggtaga ggccattctc cggctgacta acgacgctcc tgagtacctg cccgtcaggt
    20701 ttaatcacgt ctaacttgat gggttgatcg ggcaatgctt taccgtctgc atcgcgcagt
    20761 aaaccattga ggattaccgt ttcacctggg cgataaagat cgcgtgggcc aaacatgaaa
    20821 aactgtttgc tatagcctgg cgcgccagca atgttaaatt ctgctaagtc cagcgccgga
    20881 agttttaaat cgagtagcgt tgtctgaccg tctttacgtg ccagcagtaa tgccgcattt
    20941 ttatcatttt ccagctgcac atgcccctga gcgtcactgg ttgcctgagt cagagtctgc
    21001 cctttctcat ttaataaaga gacttcaatt ccttgctggg ccgcgccgtt ttccagactt
    21061 tgggtaaaga tatccagacg attgtgataa cggtgagctg aaacgccgat atcacttaac
    21121 gtaaacagcg tcgcgggatt actgtaatcg taacgtccag cctgattcat cacagccaga
    21181 tacacgcccg cctgctgaag cggtttgata tcgcccagcg gcagcaataa tttttcacgg
    21241 gtgttacgcg caggattgag atcaaaccgt ccggtgtaga ccagatccgc catctgcagc
    21301 agtttgtctg actgccagtt cgccagcgaa ttgcggtatt cccattggct aatgaatgct
    21361 ggcagagatt ctggcttaac gcggaagaag ttaacatcga cattattaac gttgagcgcc
    21421 attaccggca gcccttcaac gactttgcca ggcagcagcg aaccacggct ggcaaaaccg
    21481 acgctgggtt ggatgtcgcg ggtagttata gttttttcgt aatctttact gaaggttgcg
    21541 ttgttgagtg ctttgacctc cttgccaata gtaacgatca aatcacgttt cggttcgagg
    21601 tggcgtaaac gtagctcttt aagattatct gacagctccc aggcaccatc cactttgccg
    21661 ctttttttat cgacgacatg aataacgcgt gagaaatcct gatccgggtc gagagggatg
    21721 gagaacgtca gcaccagcgt ggctgcacca tcaagttgga cttcagagag atccagcaat
    21781 gtcagcacct taccggcact ctgttgggcc agtttttgtc tctccggcac ggagagtttt
    21841 gctgaactcg cgttttctga agaggccgct ttagtaactt cagaaggcgc atcttttttc
    21901 accgctgttg gcgcgttatc gttgttgtcg caccctgcca gcgccagcat tagcatgcag
    21961 gcggctacgc gtaacttttt catccctgcc acaatggccc gttagcaacg tcgaataatt
    22021 attatgcgtg agaatttacg ttatgtaatt cagtatcacg cccatacaat ccgaatttta
    22081 gtgagaattg tggctcagac agccaaatca gcctctttcg cttgtcgctt ttcactaaac
    22141 atccgacaat ttagcctaac cccggcaaaa atggagatgc ctatgtccac gacatggttt
    22201 gtaggagccg actggctcgc cgaacatatt gatgacccgg aaattcagat tatcgatgcc
    22261 cgcatggcgt cgcctggaca ggaagatcgt aacgttgctc aggagtatct gaatggacat
    22321 attcccggcg cagtgttttt tgatatcgaa gcgctttctg atcacacttc cccgcttccg
    22381 cacatgctgc cgcgcccgaa aacgttcgcc gtggcgatgc gtgaattagg cgttaaccag
    22441 gataagcacc tgattgtcta tgacgaaggt aatcttttct cagccccacg agcatggtgg
    22501 atgctgcgca cctttggtgt agagaaagtg tcgattctgg ggggtggact tgcaggctgg
    22561 cagcgcgatg atctgctgtt agaagaaggt gcagtagagc tgccggaagg agagtttaac
    22621 gccgcgttta atcctgaagc cgtggtgaaa gtaaccgatg tattattggc aagccatgaa
    22681 aatacggcgc aaattattga tgcccgcccg gctgcacgtt ttaacgcaga agttgatgaa
    22741 cctcgcccag gtttacgtcg cggacatatt cccggagcac tgaatgttcc gtggacggaa
    22801 ctggtgcgcg aaggcgaact aaaaacgacc gatgaactgg atgcgatatt ttttggtcgc
    22861 ggcgtcagct acgacaaacc aattatcgtc agctgcggct ctggtgtaac ggcagccgtg
    22921 gttttgttag cactcgcgac gctggatgtg ccaaacgtga aactgtacga cggcgcatgg
    22981 agtgaatggg gcgcgcgggc agatttaccg gttgagccag tgaaataagt attttacagg
    23041 caataaaaaa ccgccgaatt tggcggtttt ttattgctgg tctggttcgc ggcctttcca
    23101 gcaggttgta ttaccgtagt aatgcaagcg cgtctcagcg gagacaatac tcgccagtaa
    23161 ctctcttttt gtcaagcaaa agagagttat tattgttctg ttagtatatt atccactgcg
    23221 gccctttccg ccgtctcgca agcgggcggt ggcttaagga aaggatgttc cgcgaccgtt
    23281 agagcaagcg cgtctcagcg cttgctatcg cggcaatatc gccagtggtg ctgtcgtgat
    23341 gcggtcttcg catggaccgc acaatgaaga tacggtgctt ctgtatcgta cttattgttt
    23401 ctggtgcgct gttttcccaa gtaaataata accggagtct ctccggcgac aatttactgg
    23461 tggttaacaa ccttcagagc agcaagtaag cccgaatgcc gccctttagg gcggcatatt
    23521 ttagattatc cggttttgtt taaagtcacg caaaaaacct ccccagcgac gttcatagaa
    23581 tggcacaata tgttcggtaa taaagtggct aattcctttt tccccttttt tcacctgaca
    23641 aatatcgatt ggttcatcgc caggtaatgt atcggtcgct acacttcccg tcgcctgaat
    23701 aatttcttcg atatcaccat cggcttcaat gccaataaat aaattaggct gtgcctcttc
    23761 gttctcttta attgaacaaa taaaagcacg cttcaccggc ttaatggttt taaataaggt
    23821 ggtgagtgaa tcaatcattt gtgctggcgg ctctgcaact tccgataata tcagcgattc
    23881 accgccttcc aggatttcct ggctgctcag cggatttccc tcttcaccaa tcaacaaact
    23941 gatttcacgc ggcataaatt ctttaccggt cggcagtttg gcattaagga agagcgtttc
    24001 gccaagggtc atctcaaaca atgtgcgaac gggcattacg acaaatgcct gttcgtcttc
    24061 aaccgcctgt tgaagcgctt ctaacgaggt gaaaaaagga atgacgctgg tgccgtcttc
    24121 tttttcccag tgctgtaaat caagcgcact atcttcaacc acagcctcgc cctgcgccgc
    24181 cgtaccaggc acccagacgg tggattccag tagagtacgg aaaaaggccg ggcggtgtgc
    24241 cggttcggtt gctgcttttt ccagcaggtc ttcaagttcg ttttttgttt cggacataag
    24301 aaccacaatt cattcaacgt tcggggcgca aatgcctgat gcgctacgct tatcaggcct
    24361 acaagggatt cgcaatttgt tgaatttgca gaatttgtag gccggataag gcgtttacgc
    24421 cgcatccggc atattagttt acgccgttaa cagattagct atcgtgcgca caccaagtcc
    24481 cgtagcgccc gcagaccact gttcaaccgg cgctttacgg taagtcgccg agcagtcgat
    24541 atgcagccag ccttgctgat agttctcaac aaagtgcgac aggaagcccg ccgccgtgct
    24601 cgcgcctgcc ggatacgccg cgcttccggt attgttcagt tcggcaaagt tagacggcag
    24661 ctggctgcgg tggaattccg ccagcggcag acgccagaat ggttcgttct cttgtgaggc
    24721 actcgccagc aaacgaccgg caagcgcatc gtcaaaactg aacagcgcgt gataatcatt
    24781 acccagcgca gttttcgccg ccccggtgag ggtcgccgca tcaatgatca tttccggttt
    24841 ctgcgcactg gcatcaatca gaccatcggc aagcaccaga cgcccttcgg catcagtgtt
    24901 catcacttca acttttttac cgttgcgata ggtgatgata tcgcccagct tgaacgcatt
    24961 gccgctaatc aggttatccg cacagcagag gaacagcttc acgcgcttgt tcagtccgcg
    25021 cgtaatggca aatgccagcg ccccggtaac cgttgccgcg ccgcccatgt ccgacttcat
    25081 cgagtccata aacgcagtct gtttgatgct gtagccgccg gagtcaaaag tgataccttt
    25141 acctaccagg cacgcgtaca ctggcgcttc tttatcgcca gttgggttgt aatccagcgc
    25201 cagcaatacc ggagaacgtt ctgaagcgcg tccgacggtg tgcagcccca tataaccttg
    25261 ctcacgcaga tcttcgcctt tggtgatccg ataagtcaca cgatcgcccg cgacgttgct
    25321 gatcagatca acagcacgct gtgccagttg cgatggtccc aattcttctg ccggtgcgtt
    25381 gatggtgtca cgcacccagt cgatgatcat caggcggtta tccagttcct ggcgctgggc
    25441 atcgtccaga tccggccact ccactttacg cgtgcctttc ggggctttgt aaccttgcca
    25501 gaatgcccag cagcgatccg catcccagcc ttcaccgctt aactgaacat gcttgatgcc
    25561 cagaccgtca atcttgcgcg ccgcacgctg gatcagcccc agatcgtctg ccccgttcaa
    25621 atgcagggta atgccgtcat tattaatgct gtaagttgct ttttctcccc agcgcgcgtc
    25681 ggcaggttgg gtagagaggg taatcttcat cgcttctgtc attttagtta tccttctttg
    25741 taaaagggcc gccagttggc agccccagga tttttccgct aaatgattcg cgttgcagga
    25801 aggcggcaag tgagtgaagc cccaggagca tagataacta tgtgactggg gtgaacgagc
    25861 gcagccaacg catctgcggc gtgaagcatg acgcggaaat tattcggcct cgtccagcca
    25921 gactaacaaa atcgcttcga ggattttctc gttggatgcc tgcgggtcgt cgtcgaaatc
    25981 ttccagatcg caaatccact gatgcatatc ggtgaatcga accgttttcg gatccagatc
    26041 aggatacgca tcgtacagtg cttcgccaat ttcgcggcta tcggtccact taagtcccat
    26101 actaacctct gttaatgctc acgcgcatgg ttgatagtgt aacgcgggat ttcgactact
    26161 aaatcttcgt cggtaacgcg tgcctggcag cttaaacggc tttcgggctc cagtccccag
    26221 gctttgtcca gcatgtcgtc ttcctgctct gagctttctg gcagcgagtc aaaaccttca
    26281 cgaacgatgc agtggcaggt ggtgcaagca caggattttt cacaggcgtg ttcaatctcg
    26341 ataccgttac gcagcgctgc gtcgagaatg gtttcaccgc tattagcttc cagaacagcg
    26401 ccatcagggc agaggtcctg atgaggcaaa ataacaatct ttggcatatt aaacctcgtc
    26461 cacggaatgg cctttcagcg cacgacgaac cgactggtcc atgcggagag cggcgaaatc
    26521 ctgggtttgt ttgtctacgt ttttaatcgc ttgttcgatg gcgtcaacat catcgccctg
    26581 agccacttca ctcaggtgag cggcagcatt gtcaatgacc tgacgctctg cggcgcttaa
    26641 cagcgcggca tcagcagcca gcgcgccgtg cagactttcc agcacacgcg ccgcttctac
    26701 tttttgttct gccagcatac gggcttttac gtcctgctcg gcatagctca ttgaatcttt
    26761 gatcatcgaa gcgatttcgc tatcggtcag accgtaagaa ggtttgacct gaatagacgc
    26821 ctcaacgccg gtggatttct ccatcgccgt cacgctcaaa agaccgtcgg catcgacctg
    26881 gaacgtcacg cgaatatgcg caccgccagc cggtagcgcc ggaataccac gcagcgcaaa
    26941 acgcgccagt gagcggcagt cctgcaccag ttcgcgctca ccctgcatta catggataga
    27001 catcgccgtc tgaccatctt taaaggtggt gaaatcctga gcgcgggcca ccggaatagt
    27061 ggtattacgc ggaatcactt tctccaccag gccgcccatc gtttcgaggc ccagcgacag
    27121 tgggatcaca tcaagcagca gcatttcgct gtccggcttg ttacccacca gaatatccgc
    27181 ctgaatcgcc gcgccaatag cgacgacttt atccgggtcg atggaagtca gcggtggacg
    27241 accgaaaaat tcgcctaccc gttcacgcac cagcggcacg cgagtagaac cgccaaccat
    27301 caccacttcc agcacttcat cagcttctac gcccgcgtct ttcagcgcac gacgacaagc
    27361 cagtaaggtt cgttttacca gtggcgcgat cagttcattg aattgttcac ggctgatttc
    27421 gccctgccag cccgcaacgt taacggtcac ggagtccgca tcgctcagcg cgattttggc
    27481 tgcaatggcg gcatccagca gttcacgctg aacgcggtta tcgctacgat caggaatgtc
    27541 cgcctgctcg cgaatgtaat ccgccagcag atggtcgaaa tcatcgccgc cgagcgcgga
    27601 atcaccgccg gttgccagca cttcaaacac gccgcgactt aagcgcagaa tggaaatatc
    27661 aaacgtcccg ccaccgaggt cataaacggc gatcacgcct tcctgaccgg aatccagccc
    27721 gtaggcgata gccgcagcgg tcggttcgtt aagtaagcgc agaacatgca accccgccag
    27781 acgcgccgcg tctttggtgc cctgacgctg ggcatcgtca aagtacgccg gaacggtgat
    27841 aacgacacca tccagctcgc ctgccagggc ttcagttgcc cgcgccgcca gtgctttgag
    27901 gatgtccgca gaaacgcgca ccgggttcag cagccccgcc gccgtttcaa tcattggcag
    27961 gccgttttcg ctggcctgga attgataagg caaatgcgga tagcgttgct ggatatcagc
    28021 cagcgagcgt cccatcaggc gtttaacaga actaatggtg ttggcggtat cgagcgctgc
    28081 gttagtacgc gcgtcataac ccaccgaatg cccttgctgt tgatagtgaa caacagatgg
    28141 cagcaggtga cggccttcat ggtcggctaa cgtttcggcc tgaccgctgc gcactgtcgc
    28201 taccagcgag ttggttgtgc ccaggtcaat accggccgcc agacgacgct gatgcggcgc
    28261 agcactcaaa ccaggttcac taatttgtaa taaggccatg tttagcttcc agaaattaaa
    28321 aatcgagcag tttttcttcg agttgttcgg cactgcttcg cagtttatcg agaaaacgca
    28381 gcttacgcac ggtatccgcc gccgcgtccc acgtctcgtt gtctaactgt tcaaccatca
    28441 actgatggcg ggtatcaaac atctttttca cacgtttgat aaagctttcc agccgcgctt
    28501 catctttcgc ctgttcgatc tcgtccagtt cttcgcgcag ctccagctgt tccatcagga
    28561 acgcggtgtc gcgcacagta tgctgctcgc tggcgagatc aaaaccgtgc aaagaaagca
    28621 aatattccgc gcgcattaac ggatgacgca gcgtttgcca ggcctggtta atggttgcag
    28681 attgctgtac ggcggcgagt tgttccgcct ggcttccgct ggcgaattta tcaggatgat
    28741 actgacgttg tagatcctga aaacgcaggc tcagtgcctg ggtatcgagt tgataacggg
    28801 caggcaagcc aaagagggtg aagtaatcca taacattctc agggctgcga tccgccgcga
    28861 taacggcgaa tcaggtaaaa caaaccccac gcgcaggcga ccacggtggg gttatcggta
    28921 tgcgcatcaa acgtggaagc tttcgccgca accacactca tctttaacgt tcgggttggt
    28981 gaatttaaac ccttcattca ggccttcttt tacgaagtcc agctgcgtac cgtccagaaa
    29041 ttgcaggctt ttgccatcga ccacgacttt cacgcctttg tcttcaaaca cgatgtcttc
    29101 cggcgtcggt tcgtcaacaa attccagtac ataagccata cctgaacatc cggaggttct
    29161 cacgcccaga cgcaggccaa accctttgcc gcggttagcc agaaaggtat ttactcgcgc
    29221 tgctgcactg tcgctcagtg taatcgacat aaccaaacct caactcttat tttgcttcac
    29281 gtttgctttt atagtccgca atggcggctt tgatcgcgtc ttctgccaga atagaacagt
    29341 gaattttcac cggcggcagt tcaagttctt cagcaatatc ggtgtttttg atcgcctgcg
    29401 cttcgacgag agacttccct ttcacccatt cggtgaccag ggagctggaa gcgatagcag
    29461 aaccgcagcc gtaagtttta aaacgcgcgt cttcaatgat accttcatcg ttgactttaa
    29521 tctgcaactt catcacgtcg ccacaggccg gtgcacccac catgccgctg ccgacgttct
    29581 cgtcgttgtt gtcaaaggaa cccacgttac gcggattctc gtaatggtcg ataacttttt
    29641 cgctgtaagc cattataaat tctcctgatt ccgataccga ttaatgatga gcccattcga
    29701 tgctgttcag atccacgccc tgcttgtaca tttcccacag cggagaaagg tcacgcagac
    29761 gaccgatgga tttacgaact aactcgatgg tgtagtcgat ctcttcttca gtagtaaaac
    29821 gacctaaaga gaaacggata gagctatgtg ccagctcgtc gttcagcccc agcgcgcgca
    29881 gcacgtagga cggttcgagg cttgctgacg tacaggcgga acctgaagaa actgcgaggt
    29941 ctttcagcgc cataatcagc gactcacctt caacgtagtt gaagctgacg ttgagaatgt
    30001 tcggcgcacc gtgttccagg tcaccgttca ggtaaacttc ttcgatatct ttgatgccgt
    30061 tccacagacg gttacgcagg ccgcgcagac gttccatctc ggtcgccatc tcttcttttg
    30121 cgatgcgata ggcctcgccc attccgacga tctggtgaac aggcagagtg ccggaacgca
    30181 taccgcgctc gtgaccgccg ccgtgcattt gcgcttcgat gcgtacgcgc ggtttacgac
    30241 gtacatacag cgcaccgata cctttcgggc catagatttt gtgaccggag aaagacatca
    30301 ggtcaacttt caactggctc aggtcgatag gcagtttgcc cacgctctgg gttgcatcaa
    30361 cgtgatagat aatgccacga gcacggcaca tttcgccgat agccgcgata tcctgcacca
    30421 cgccgatttc gttatttacg tgcatgatgg aaacaaggat ggtgtcgtca cgcatcgctg
    30481 cttcaagttc tttcaggtcg ataatgccgt tacgctgcgg tgccaggtag gtgacttcaa
    30541 aaccttcgcg ctccagctga cggcaggtat ccagtaccgc tttgtgttcg gttttgctag
    30601 tgatgatgtg cttgcctttt ttctgataaa agttggctgc acctttgatc gccaggttgt
    30661 cagattcggt tgcaccagag gtaaagacga tttcacgcgg atcagcgccg accagatcgg
    30721 ctatctgatt acgggcgata tctaccgctt cttcagcctg ccagccgaaa cggtgagaac
    30781 gagaggccgg gttaccaaag gttccgtcca tcgtcatgaa ctgcatcatt ttctcggcaa
    30841 cacgcgggtc caccggcgtg gttgcggagt agtcgagata aatcggtaat ttcattgctc
    30901 tataaactcc gtacatcact caatgcaagg aatcaggcta ccggctggat gtacgaccgt
    30961 gtttacggag tatttagcac tccggcctga ttctgaattc tttttattaa gcgcgtaact
    31021 taacgtcgat cgcgtcttgt gtgcgggtgc gtggcgcgtc gtgagtatgc tgacgaccag
    31081 acacatccag cacttcctgg ttattaacca gttcgcctaa agtaatgttg ttgagaaaac
    31141 cggtgagacg gtcgctcaaa tcacgccaca gcgcgtgggt caggcattta tcgccgccct
    31201 ggcagccgcc tttaccctga caacgggtgg catctacaga ttcgtcaacg gcgctaatca
    31261 cttcgccaac ggcgatgctg ctggcatctt tgcctaacag ataaccaccg cctggtccac
    31321 gtacgctgga aaccagacca tttttacgca gacgggaaaa cagttgttcc agataagaaa
    31381 gggaaatgcc ctgacgttcg gaaatatcag ccaacggtac cgggcccgct tcagagttga
    31441 gcgcaacgtc aagcattgcg gtcacggcat agcgcccttt agatgtcagt ctcatgtctt
    31501 acttcacctc aaactcgccc ctgcccgggg ttttttattg taaaagtggg ggtattgaat
    31561 agcagggtca agtctgacat tcccgagtaa attggtcaac tatttacttg actgatttag
    31621 tcgggtattt aaccttcagt gccatttttt tatcgtggcg tttgtacctg ttgtcggatg
    31681 cggtgtgaac accttatccg acctacggtt ctgtacattg taggcctgat aagacgcgtt
    31741 aagcgtcgca tcaggcaact actgttattc ggccttgtta cctttattct gctgctcaat
    31801 agaagccaga atcccgcgca ggatattcaa ttcctggctt tccgggcgcg cacgggtaaa
    31861 cagacggcgc aatttattca tcacctgccc cggatggttt tcacggataa aaccggttgc
    31921 cagcagcgtt tgttccagat gaccataaaa acgctccaga tcatcgacca gcggatacgg
    31981 cgtctcttca tgctcgacct gctcgccgtt ttcctgagtt gccagccagg ccatgcgcac
    32041 ttcataggca ataacctgaa ccgccatcgc caggttcagc gagctgtatt ccgggttagc
    32101 cgcaatcgcg acatgataat ggcatttctg caactcttca ttggtcaagc cgacgcgctc
    32161 gcgaccaaac accagcgcca ccggggtatt tgccgcttca gcgacgcttt tcaggccgca
    32221 ttcgcgcggg tcgagcatcg gccatggcag cgtgcgggaa cgtgcgctgg tgcccaccac
    32281 caagctacaa ccggctaacg cttcgtcgag cgtatcgacg atgtgagcat taccaatcac
    32341 atcgctggcc cctgctgcca gggcaatcgc ctgggagtcg ggtttcacca gtggattaac
    32401 cagccacaga ttggttaatc ccattgtttt catggcacgg gcaacagaac ccatattgcc
    32461 ggtgtgtgac gtctccacca gcacaattcg aatattttgc agcattgtct ttcttcatct
    32521 aaagattatt cacgcatctt atcataaaac gaagacagat gccgatctcg ctgctatact
    32581 ctgcgccgtt ttcccgttct ttaacatcca gtgagagaga ccgatgcatc cgatgctgaa
    32641 catcgccgtg cgcgcagcgc gcaaggcggg taatttaatt gccaaaaact atgaaacccc
    32701 ggacgctgta gaagcgagcc agaaaggcag taacgatttc gtgaccaacg tagataaagc
    32761 tgccgaagcg gtgattatcg acacgattcg taaatcttac ccacagcaca ccatcatcac
    32821 cgaagaaagc ggtgaacttg aaggtactga tcaggatgtt caatgggtta tcgatccact
    32881 ggatggtact accaacttta tcaaacgtct gccgcacttc gcggtatcta tcgccgttcg
    32941 tatcaaaggc cgcaccgaag ttgctgtggt atacgatcct atgcgtaacg aactgttcac
    33001 cgccactcgc ggtcagggcg cacagctgaa cggctaccgt ctgcgcggta gcaccgctcg
    33061 cgatctcgac ggtaccattc tggcgaccgg cttcccgttc aaagcaaaac agtacgccac
    33121 tacctacatc aacatcgtcg gcaaactgtt caacgaatgt gcagacttcc gtcgtaccgg
    33181 ttctgcggcg ctggatctgg cttacgtcgc tgcgggtcgt gttgacggtt tctttgaaat
    33241 cggtctgcgt ccgtgggatt tcgcggcagg cgagctgctg gttcgtgaag cgggcggcat
    33301 cgtcagcgac ttcaccggtg gtcataacta tatgctgacc ggtaacatcg ttgctggtaa
    33361 cccgcgtgtt gtgaaagcca tgctggcgaa catgcgtgat gagttaagcg acgctctgaa
    33421 gcgttaatga ctcaggcggg tgatgtcact cacccgccct cgcctttcag gcgctattcc
    33481 gaaatacttc ctcaccgctt tactttcttt cgtcactctc ccaccatctt tccccgatta
    33541 atggatgata aagaagtcac aaggaaaggt tatggcgctg ccagtgaaca aacgcgttct
    33601 caaaattctg tttattctct ttgttgttgc cttctgcgtt tatttagtgc cgcgcgttgc
    33661 catcaacttc ttctattatc ctgacgataa aatttacggt cccgacccct ggtcggcgga
    33721 atccgtcgaa tttacggcta aggacggtac tcgtctgcaa ggctggttta ttccttcttc
    33781 gacgggccct gctgacaatg ccatcgcaac catcattcat gctcacggca atgccggaaa
    33841 tatgtccgcc cactggccgc tggtcagttg gttacccgag cgtaatttca acgtttttat
    33901 gtttgattat cgcgggtttg gtaaatcaaa agacacgccg tcccaggccg gattgctgga
    33961 cgatacgcaa agtgccatca atgtggtgcg ccatcgcagt gatgtaaacc cacaacggct
    34021 ggtgctgttc gggcagagta ttggcggggc gaatattctt gctgttattg gtcaggatga
    34081 tcgtgaaggc atacgtgcgg tgatcctcga ctccacattt gcctcttatg caaccatcgc
    34141 caatcagatg atccccggca gtggctactt acttgatgag agttacagcg gcgaaaatta
    34201 tatcgccagc gtcagcccga tcccgctttt actcattcac ggtaaagctg atcacgttat
    34261 cccatggcag cacagcgaaa agttgtatag cctggcaaaa gagacaaaac ggttgatcct
    34321 aatcccggat ggcgaacaca ttgatgcttt ttccgatcgt cacggcgatg tttatcgcga
    34381 acagatggtg gactttatcc ttagcgcgtt gaatccgcag aactaaccca tgatcgctag
    34441 cacgataatc attcacaaaa ccaccttaag acatgctaat ccactggtca gaacagttta
    34501 agatgagaaa aattctgtga cgcttgccaa catttctgat gattagcatt cccttcgcca
    34561 tttacctgag caaactttag ctattcttat caattatgct tatgggagat ctacagatga
    34621 tgcctacgct tgctccacca tctgtccttt cggctcccca gcgccgctgc cagatcttgc
    34681 tgacgctctt tcagccgggg ttgaccgcca ccatggcaac cttcagcgag cttaatggtg
    34741 tggatgatga tattgccagt cttgatatca gcgaaacagg acgggagatc ctgcgctatc
    34801 atcaactcac actgacgact ggttatgacg gtagctaccg ggttgaaggt acagtgctta
    34861 accaacgttt gtgtttattt cactggctac gacgtggttt ccgtctgtgt ccgtcattta
    34921 ttaccagcca attcaccccc gccctgaaga gtgaactgaa gcggcgcgga attgcgcgta
    34981 acttttacga cgataccaat ctacaagcgt tagtgaatct ctgctcccga cggctgcaaa
    35041 aacgctttga aacgcgcgat attcatttcc tgtgtctgta tctgcaatat tgtttgctgc
    35101 aacaccacgc tggaattacg cctcagttta atccgctcca acgtcgctgg gcggaatcct
    35161 gccttgaatt tcaggtagcg caggaaattg gacgccactg gcagcgtcgg gcgctccagc
    35221 ctgtaccgcc tgatgagcca ctgtttatgg cattactttt ttccatgttg cgggttcccg
    35281 atccattgcg tgatgcgcat cagcgagaca gacaattgcg tcagtctatc aaacgtctgg
    35341 taaaccattt tcgtgagctg ggaaatgttc gtttttatga tgaacagggg ttatgcgatc
    35401 agctttatac ccacctcgcc caggcgttaa atcgcagttt gtttgccatc ggtattgata
    35461 ataccctgcc agaagagttc gccagactgt acccacgcct ggtgcgcacc acccgcgcgg
    35521 cgctggccgg atttgaaagt gaatacggcg tccatctttc tgatgaggaa agtggtctgg
    35581 tcgcggtgat tttcggtgcc tggctaatgc aggaaaacga tctgcatgaa aaacagatta
    35641 ttcttcttac cgggaatgat agcgagcgag aagcgcagat tgagcagcag ttacgcgaac
    35701 taacgttact gccgctcaac attaaacata tgtcggtaaa ggcatttttg cagacaggcg
    35761 ctccgcgcgg cgcggcactg attattgcgc cttataccat gccgttaccg ctcttttcac
    35821 caccgctgat ctatacggac ctgacactga caacacatca acaggagcag atccgcaaaa
    35881 tgctcgaatc agcatgaggg aacaactttc gggcgcaaaa acattgccgg aagcgccacc
    35941 agcgccatta cccagaacac gccgtggccc agatattgat acaggaaacc ggcgaaaacg
    36001 gtcatgatag ctatactgcc gcccatcgcg acggcagagt aaaccgcctg taaacggatg
    36061 acttcgctac cctggcgagc ggcaatatag cgcatggcgg ccaggtggca gaccgtgaag
    36121 gcgccgcaat gcagaatttg caccactatc aaccacggca acgccgtagt tgctcccata
    36181 atgccccagc gcactacgcc gcaaatcgcc gagatcaaca gcatatcgcg tgcactacaa
    36241 cggcggaaaa gtttattact cagcgcaaag ataatgactt ccgccaccac gcccagcgac
    36301 cacaaatacc ccaccgccga ggccgagtag ccagctgcct gccagtaaat ggcgctaaaa
    36361 ccgtaatagg ccgcatgtgc cccctgcaat aaacaaacgc aggccagaaa gcgccagttc
    36421 tgaagaacca gcgccaacca cgctgaccaa ccggtgctct cctgctggcg gcttgcccct
    36481 tgtggctgaa tcgtcggacg gatgagaaag ccgagcagca tagatgccac gcccaatgtt
    36541 aacagcgcga ggatcacctg ataatcaaac atagtgacca gtttgcccgt cagcgccgag
    36601 ccaatgacaa acgccaccga gccccacagt cgcactttgc cgtaatcaag cgggaactgc
    36661 ttttgccacg tattcgccag tgcatcggtc aacggtacca gcggtgagaa aaagaggtta
    36721 aagccaatca tcaccagcat cagccacgct acgtgcgccc ccgcccagaa ggcgacagca
    36781 aagagaagtg tcatcattgc cagcacgcgc aaggcggaaa tcaggcgaga aggatcgctg
    36841 acgcggggcg cgatgagcaa actcccgaga aaacgggcaa ccagacctgc ccccaataac
    36901 aggccgatgg tttctggcgt taaaccaatc cctttaagcc agacgctcca gaaaggtaga
    36961 aaaatgccgt aactaaaaaa gtatgtgaaa tagccgagcg ccaaccagcg cgtggattgc
    37021 aaaaccatga gtccctcccg tcaggaggcg ttagtctggg gttaatcgaa tgttggtgca
    37081 agttgaaaaa taagaatatt cgagcctgct tcccgatgtc tgtaacgcca gttcacaagc
    37141 actaaaaaac tgcgatccgc gacgcatgtt gcaaaaataa tgcgtaatta tgccgttacg
    37201 cttgccaaac gttcctgcac aatggcgatg aaatcgcgta atgccggctt catctcccct
    37261 ttcttccacg ccatcagtaa agcaatggaa ggcacatttc cggcaatggg acgaaaaaca
    37321 acctgtccgg tattaaaatt attcatataa ccgggtatca aagtgacgcc cagccccatg
    37381 cccaccagat tcatggtcac cagaatattc gttgccacct ggacgatatt tggctggctg
    37441 ttttcttgcg caaacctcgc tttaacgatc ggcgcaagcg aaccggaata cgccggatcg
    37501 gtactgacga aattcacgcc atccagttgc gcggcggtga tctctttttc atgtgctaaa
    37561 gggtgatcaa ccggtaacac aaccactaat ggttcgtcaa aaagctccag ataatcaatc
    37621 tccgggctat aaacaggatg gcgcattaag ccgacgtcga gttcaccacg gcgaattttt
    37681 tcctcctgtt gcgtggtgat taaactcacc agctcaatca aggtgtctgg ctgtctgaga
    37741 cgaaacatcg gtaatacttt tggcagtaaa ttcacttccg ccgatggcac aaagccaatg
    37801 gttaattgtc tgtcttcctg aacagttttc cgcgcccgta atttggcatt ttccgcttgt
    37861 tcgaggattg ccagcgcgtc ctggagaaaa cattctcccg ccgccgtcaa cgcgactttg
    37921 cgcttatccc tcaccagtaa cggaacaccg acacagtttt caagatcgcg gatctggctg
    37981 cttaacgaag gctgtgaggt atgcagtttt tccgccgcac gggtaaagtt cagtgcctgc
    38041 gccactgcga cgaaatagcg taaatgccgt agttccatca ccttcccctt gttatcgaaa
    38101 aaacgtctca gctggtagaa attaactatt tcacatatta gcaaccaacc agcaacatcc
    38161 ttatggcaca aaaatagaag gtcaatacat cttatctttc aggattaaaa aatatgacca
    38221 caccctcaga tttgaacatt taccaactga ttgacaccca aaatggtcgg gtcactccgc
    38281 gtatttatac cgacccggat atttaccaac tggagcttga gcgtattttc ggtcgttgct
    38341 ggctatttct cgcccacgaa agccagatcc caaaacccgg tgatttcttt aacacctaca
    38401 tgggagaaga tgcggttgtc gtagtgcgtc agaaagacgg cagcatcaag gcgtttctca
    38461 accaatgccg ccaccgggcc atgcgtgtga gttatgcaga ttgcggcaac actcgcgcct
    38521 ttacctgccc gtatcacggc tggtcttatg gcattaacgg cgagttgatc gatgtaccgc
    38581 tggaacctcg cgcctaccca caagggttgt gtaaatccca ctgggggcta aacgaagttc
    38641 cttgtgtgga gagttataaa gggctgattt ttggcaactg ggataccagc gcaccgggcc
    38701 tgcgtgatta ccttggtgac attgcctggt atctggatgg catgctggat cgtcgcgaag
    38761 gcggcaccga aattgtcggc ggcgtacaaa agtgggtgat caactgtaac tggaaatccc
    38821 cggcagagca gttcgccagt gaccaatatc atgctctgtt cagccatgct tctgccgttc
    38881 aggtattagg ggcgaaagat gatggcagcg ataagcgtct cggtgatgga caaaccgccc
    38941 gcccggtgtg ggaaaccgcc aaagatgcgc tgcaatttgg tcaggacggt cacggtagcg
    39001 gtttcttctt tactgaaaaa ccggatgcta atgtctgggt cgatggcgcg gtttccagct
    39061 attaccgcga aacctatgcc gaagcagaac aacgtttagg tgaagttcgc gccctgcgcc
    39121 tggcgggtca taacaatata ttccccacgc tttcatggct aaacggcact gccacactcc
    39181 gcgtctggca tccgcgcggc cctgatcaag ttgaagtgtg ggcgttctgt attactgaca
    39241 aagccgcctc cgatgaagtt aaagccgctt ttgaaaacag cgccactcgt gcttttggtc
    39301 ctgctggttt tctcgagcag gatgactcgg agaactggtg tgaaatccag aaattgctta
    39361 aaggccaccg cgcccgcaac agcaaactgt gtctggaaat ggggcttggt caggaaaagc
    39421 gccgcgacga cggcattcct ggcattacta actatatctt ttcagaaact gccgctcgtg
    39481 gaatgtacca acgctgggcc gatcttctga gtagcgaaag ctggcaggaa gtgctcgata
    39541 aaaccgccgc ttaccagcag gaggtgatga aatgagtgcg caagtttcac tagagttaca
    39601 tctccgcatt agccagtttc tctttcacga agccagctta ctggacgact ggaaatttcg
    39661 tgactggctg gcgcagctcg acgaagagat tcgttacacc atgcgcacca cagttaacgc
    39721 gcaaacacgc gaccgccgca aaggcgtcca gccaccgaca acctggattt ttaatgacac
    39781 caaagaccag ctggagcggc gaatcgcccg tctggaaacg ggcatggcct gggcagaaga
    39841 gccgccgtca cgcacccgtc acttaatcag caactgccag ataagcgaaa ccgacatccc
    39901 aaacgtattt gctgtgcggg taaattatct gctttatcag gcacaaaaag agcgcgatga
    39961 aacattctat gttggaacgc gtttcgacaa agttcgccgt ctggaagatg acaactggcg
    40021 cttgctggaa cgggatatcg tcctggatca agcggtaatc acttcccata acctgagtgt
    40081 actgttctga tgaatcgaat ttatgcgtgt cccgttgcgg atgtgccgga gggtgaggct
    40141 ctccggatcg atacctcgcc cgtcatcgcc ctgttcaacg ttggcggcga gttttatgcc
    40201 attaacgatc gttgcagcca tggtaatgcg tcgatgtcag aagggtatct ggaagatgac
    40261 gccacggtgg agtgcccgct acacgccgcc agtttttgcc tgaaaacggg gaaagcgtta
    40321 tgcctgcccg ccaccgatcc gctcaccact tatccagtac acgttgaagg tagtgacatt
    40381 ttcatcgact taccggaggc gcagccatga gcgatctgca taacgagtcc atttttatta
    40441 ccggcggcgg atcgggatta gggctggcgc tggtcgagcg atttatcgaa gaaggcgcgc
    40501 aggttgccac gctggaactg tcggcggcaa aagtcgccag tctgcgtcag cgatttggcg
    40561 aacatattct ggcggtggaa ggtaacgtga cctgttatgc cgattatcaa cgcgcggtcg
    40621 atcagatcct gactcgttcc ggcaagctgg attgttttat cggcaatgca ggcatctggg
    40681 atcacaatgc ctcactggtt aatactcccg cagagacgct cgaaaccggc ttccacgagc
    40741 tgtttaacgt caacgtactc ggttacctgc tgggcgcaaa agcctgcact ccggcgttaa
    40801 tcgccagtga aggcagcatg attttcacac tgtcaaatgc cgcctggtat cctggcggcg
    40861 gtggcccgct gtacaccgcc agtaaacatg ccgcaaccgg acttattcgc caactggctt
    40921 atgaactggc accgaaagtg cgggtgaatg gcgtcggccc gtgtggtatg gccagcgacc
    40981 tgcgcggccc acaggcgctc gggcaaagtg aaacctcgat aatgcagtct ctgacgccgg
    41041 agaaaattgc cgccatttta ccgctgcaat ttttcccgca accggcggat tttacggggc
    41101 cgtatgtgat gttggcatcg cggcgcaata atcgcgcatt aagcggtgtg atgatcaacg
    41161 ctgatgcggg tttagcgatt cgcggcattc gccacgtagc ggctgggctg gatctttaag
    41221 gaagcacgat gaaagaaaaa acgatcatta ttgtcggtgg cgtgcaagcg gcggcaatgg
    41281 ctgcggcctc gctacgccag caagggttca ccggtgagct gcatctgttt tccgatgagc
    41341 gacatcttcc ttatgaacga cctccactct cgaaatccat gttgctggaa gattccccgc
    41401 agttacagca ggtgttaccc gctaactggt ggcaggaaaa caatgttcat ctgcattccg
    41461 gtgtaaccat caaaacgctg ggtcgcgaca cacgagagtt agtgttaacc aacggcgaaa
    41521 gctggcactg ggatcagctt tttatagcaa ccggcgcggc agctcgaccg ctgccgttgc
    41581 ttgatgcact gggagaacgc tgctttaccc tacgccatgc cggtgatgcc gccagactgc
    41641 gagaagttct gcagcccgaa cggtcagtcg tgattgtcgg tgccggaact attggtctgg
    41701 aactggctgc cagcgccacg cagcgcagcg cagcgcagat gtaaggtgac agtgattgaa
    41761 ctggcggcaa ccgtcatggg ccgtaatgca ccaccgcccg tgcaacgcta tcttttacag
    41821 cgccaccagc aggctggtgt gcgcattctg ctcaataatg ccattgaaca tgtagtcgat
    41881 ggtgaaaaag tagaactgac gctgcaaagt ggggaaacgc ttcaggctga tgtggtgatt
    41941 tacggtattg gtatcagcgc caacgagcaa ctggctcgcg aggccaacct tgatactgcc
    42001 aatggcattg tcattgatga ggcttgccgc acctgcgatc ccgcgatctt tgccggtggc
    42061 gatgtggcaa tcactcgtct tgataatggt gcactacacc gctgtgaaag ctgggaaaac
    42121 gccaataacc aggcgcaaat tgccgctgcc gcaatgttag ggctaccgct accgctactg
    42181 ccgtggttct ggagcgatca gtacagtgat aacttacagt ttattggcga tatgcgtggc
    42241 gatgactgag gtagcctgag tttaacggac actccttcct gaaatagaat ggc
//
LOCUS       DAJVUK010000012        41615 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.012, whole genome shotgun sequence.
ACCESSION   DAJVUK010000012 DAJVUK010000000
VERSION     DAJVUK010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 41615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41615
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.012"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(89..1180)
                     /gene="ychF"
                     /locus_tag="OQQ57_000677"
     CDS             complement(89..1180)
                     /gene="ychF"
                     /locus_tag="OQQ57_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HCS1955545.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            complement(1297..1881)
                     /gene="pth"
                     /locus_tag="OQQ57_000678"
     CDS             complement(1297..1881)
                     /gene="pth"
                     /locus_tag="OQQ57_000678"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCS1955546.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            2159..2437
                     /gene="ychH"
                     /locus_tag="OQQ57_000679"
     CDS             2159..2437
                     /gene="ychH"
                     /locus_tag="OQQ57_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HCS1955547.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            complement(2492..4171)
                     /gene="dauA"
                     /locus_tag="OQQ57_000680"
     CDS             complement(2492..4171)
                     /gene="dauA"
                     /locus_tag="OQQ57_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HCS1955548.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIIYPVSQQFGL
                     AGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPISGRLAFFPNRRAAMADL"
     gene            complement(4296..5243)
                     /gene="prs"
                     /locus_tag="OQQ57_000681"
     CDS             complement(4296..5243)
                     /gene="prs"
                     /locus_tag="OQQ57_000681"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HCS1955549.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(5394..6245)
                     /gene="ispE"
                     /locus_tag="OQQ57_000682"
     CDS             complement(5394..6245)
                     /gene="ispE"
                     /locus_tag="OQQ57_000682"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HCS1955550.1"
                     /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            complement(6245..6868)
                     /gene="lolB"
                     /locus_tag="OQQ57_000683"
     CDS             complement(6245..6868)
                     /gene="lolB"
                     /locus_tag="OQQ57_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HCS1955551.1"
                     /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
                     TYSQNGKNWKVVYGGYDTKTHPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            7082..8338
                     /gene="hemA"
                     /locus_tag="OQQ57_000684"
     CDS             7082..8338
                     /gene="hemA"
                     /locus_tag="OQQ57_000684"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041689438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HCS1955552.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
                     WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            8380..9462
                     /gene="prfA"
                     /locus_tag="OQQ57_000685"
     CDS             8380..9462
                     /gene="prfA"
                     /locus_tag="OQQ57_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HCS1955553.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            9462..10295
                     /gene="prmC"
                     /locus_tag="OQQ57_000686"
     CDS             9462..10295
                     /gene="prmC"
                     /locus_tag="OQQ57_000686"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCS1955554.1"
                     /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
                     TQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            10292..10684
                     /locus_tag="OQQ57_000687"
     CDS             10292..10684
                     /locus_tag="OQQ57_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HCS1955555.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            10688..11497
                     /locus_tag="OQQ57_000688"
     CDS             10688..11497
                     /locus_tag="OQQ57_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HCS1955556.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDPVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            11533..12387
                     /gene="kdsA"
                     /locus_tag="OQQ57_000689"
     CDS             11533..12387
                     /gene="kdsA"
                     /locus_tag="OQQ57_000689"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HCS1955557.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
     gene            complement(12536..12643)
                     /locus_tag="OQQ57_000690"
     CDS             complement(12536..12643)
                     /locus_tag="OQQ57_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCS1955558.1"
                     /translation="MTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK"
     gene            complement(13071..13178)
                     /locus_tag="OQQ57_000691"
     CDS             complement(13071..13178)
                     /locus_tag="OQQ57_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCS1955559.1"
                     /translation="MTLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK"
     gene            complement(13583..14683)
                     /gene="chaA"
                     /locus_tag="OQQ57_000692"
     CDS             complement(13583..14683)
                     /gene="chaA"
                     /locus_tag="OQQ57_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HCS1955560.1"
                     /translation="MSNAQEAVKTRHKEISLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
     gene            14953..15183
                     /gene="chaB"
                     /locus_tag="OQQ57_000693"
     CDS             14953..15183
                     /gene="chaB"
                     /locus_tag="OQQ57_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HCS1955561.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            15341..16036
                     /gene="chaC"
                     /locus_tag="OQQ57_000694"
     CDS             15341..16036
                     /gene="chaC"
                     /locus_tag="OQQ57_000694"
                     /EC_number="4.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-specific
                     gamma-glutamylcyclotransferase"
                     /protein_id="HCS1955562.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYPDGVLRPGFA"
     gene            complement(16080..16433)
                     /gene="ychN"
                     /locus_tag="OQQ57_000695"
     CDS             complement(16080..16433)
                     /gene="ychN"
                     /locus_tag="OQQ57_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HCS1955563.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            16617..18011
                     /gene="ychO"
                     /locus_tag="OQQ57_000696"
     CDS             16617..18011
                     /gene="ychO"
                     /locus_tag="OQQ57_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HCS1955564.1"
                     /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYFTWSQLGLTQQDNGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLLANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEYNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            complement(18012..18662)
                     /gene="narL"
                     /locus_tag="OQQ57_000697"
     CDS             complement(18012..18662)
                     /gene="narL"
                     /locus_tag="OQQ57_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HCS1955565.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(18655..20451)
                     /gene="narX"
                     /locus_tag="OQQ57_000698"
     CDS             complement(18655..20451)
                     /gene="narX"
                     /locus_tag="OQQ57_000698"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HCS1955566.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDEQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPASSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            20790..22181
                     /gene="narK"
                     /locus_tag="OQQ57_000699"
     CDS             20790..22181
                     /gene="narK"
                     /locus_tag="OQQ57_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HCS1955567.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
     gene            22697..26419
                     /locus_tag="OQQ57_000700"
     CDS             22697..26419
                     /locus_tag="OQQ57_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCS1955568.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERAYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNQLMLTLGRGGPVVWLSEADAKELGIADNDWIEVYNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGND"
     gene            26437..27975
                     /gene="narH"
                     /locus_tag="OQQ57_000701"
     CDS             26437..27975
                     /gene="narH"
                     /locus_tag="OQQ57_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HCS1955569.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            27972..28682
                     /gene="narJ"
                     /locus_tag="OQQ57_000702"
     CDS             27972..28682
                     /gene="narJ"
                     /locus_tag="OQQ57_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HCS1955570.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEVIAASKNLSKEDAHALG
                     IFLRDLTAMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            28682..29359
                     /gene="narI"
                     /locus_tag="OQQ57_000703"
     CDS             28682..29359
                     /gene="narI"
                     /locus_tag="OQQ57_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HCS1955571.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFAGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(29542..29673)
                     /locus_tag="OQQ57_000704"
     ncRNA           complement(29542..29673)
                     /ncRNA_class="other"
                     /locus_tag="OQQ57_000704"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(29721..29805)
                     /locus_tag="OQQ57_000705"
     tRNA            complement(29721..29805)
                     /locus_tag="OQQ57_000705"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(29769..29771),aa:Tyr,seq:gta)
     gene            complement(29840..29924)
                     /locus_tag="OQQ57_000706"
     tRNA            complement(29840..29924)
                     /locus_tag="OQQ57_000706"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(29888..29890),aa:Tyr,seq:gta)
     gene            complement(30084..30926)
                     /gene="purU"
                     /locus_tag="OQQ57_000707"
     CDS             complement(30084..30926)
                     /gene="purU"
                     /locus_tag="OQQ57_000707"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HCS1955572.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVNHEGLSRNEHDQKMADAIDAYK
                     PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
     gene            complement(30976..31434)
                     /locus_tag="OQQ57_000708"
     CDS             complement(30976..31434)
                     /locus_tag="OQQ57_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HCS1955573.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            31547..32452
                     /gene="rssA"
                     /locus_tag="OQQ57_000709"
     CDS             31547..32452
                     /gene="rssA"
                     /locus_tag="OQQ57_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HCS1955574.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQCREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVERKMDELLPLVRTNI"
     gene            32544..33557
                     /gene="rssB"
                     /locus_tag="OQQ57_000710"
     CDS             32544..33557
                     /gene="rssB"
                     /locus_tag="OQQ57_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HCS1955575.1"
                     /translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDATVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            33759..34667
                     /gene="galU"
                     /locus_tag="OQQ57_000711"
     CDS             33759..34667
                     /gene="galU"
                     /locus_tag="OQQ57_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HCS1955576.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEQVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(34811..35224)
                     /gene="hns"
                     /locus_tag="OQQ57_000712"
     CDS             complement(34811..35224)
                     /gene="hns"
                     /locus_tag="OQQ57_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HCS1955577.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKARRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            35829..36446
                     /gene="tdk"
                     /locus_tag="OQQ57_000713"
     CDS             35829..36446
                     /gene="tdk"
                     /locus_tag="OQQ57_000713"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HCS1955578.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
     gene            complement(36728..37624)
                     /locus_tag="OQQ57_000714"
                     /pseudo
     CDS             complement(36728..37624)
                     /locus_tag="OQQ57_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904641.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
     gene            complement(37748..40423)
                     /gene="adhE"
                     /locus_tag="OQQ57_000715"
                     /gene_synonym="adhC"
     CDS             complement(37748..40423)
                     /gene="adhE"
                     /locus_tag="OQQ57_000715"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HCS1955579.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGILSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
     gene            40901..41548
                     /gene="ychE"
                     /locus_tag="OQQ57_000716"
     CDS             40901..41548
                     /gene="ychE"
                     /locus_tag="OQQ57_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HCS1955580.1"
                     /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
BASE COUNT        10235 a        10204 c        10822 g        10354 t
ORIGIN      
        1 aaatgaaaaa tccacgcaat tgcgtggatt ttatatactt ttgcgctctt catgagattt
       61 agcgaaacct catgagacaa taaattaatt agacgttgaa aaggaagttc atcacatcgc
      121 catctttcac gatgtaatct ttaccttctg cacgcatttt gcctgcttct ttcgcgcctt
      181 gttcaccttt gtaagtgatg aaatcttcaa acgagatggt ttgtgcacgg ataaagcctt
      241 tttcaaaatc agtatggatt ttgcccgctg cctgcggcgc ggttgctcca accggaatgg
      301 tccatgcacg cacttctttc accccagcgg tgaagtaagt ttgcaggttc agcagcttat
      361 aaccggcacg gatcacacgg ttcaggcccg gctcttccag cccaagctcc tgcataaact
      421 cgtcacgttc ttcgtcgtcc agttcggcaa tgtctgcttc aacagcagca caaaccggaa
      481 ccacaacaga accttctttc gccgcgattt cacgcacctg gtcaagatat gggttgtttt
      541 caaaaccgtc ttcgttgacg ttggcgatgt acattgttgg tttcagcgtc aggaagctca
      601 ggtaacgaat agccgctttc tcttcagcgc ttaaatccag cgcgcgcagc atacctgcat
      661 tttccaactg gggcaggcat ttttccagga ccgccagctc agctttcgcg tctttatcgc
      721 cacctttggc tttcttctgt acgcgatgaa tcgcacgttc gcaggtgtcg aggtctgcca
      781 gcgccagttc ggtgttgata acttcaatat cgtcagccgg gttaactttg ccggaaacgt
      841 gaatgatgtt gtcattttca aagcagcgaa caacgtgacc gatcgcttcg gtttcacgga
      901 tgttggtcag gaactggtta cccagacctt cgcctttcga tgcgcctttt accagaccgg
      961 cgatatcgac aaattccatg gtcgtgggaa gcgtacgctg cggttttacg atttcagcca
     1021 gttgatccag gcgaggatca ggcattggta cgacgcctgt gttcggctca atggtgcaga
     1081 atggaaagtt ggccgcttca ataccggctt tggtcagcgc gttgaacagg gtagatttcc
     1141 cgacgttggg caaaccgacg ataccgcatt tgaatcccat gatttaaatc accttaatat
     1201 cttaataatc aacctgttat tgctaacaga ttgcagaaat ggaaataact ttgcctatta
     1261 tacacggcac tcggcaaaaa tgccgcagac aacgacttat tgcgctttaa aggcgtgcaa
     1321 tcggttcgtt gctttggtca agccatctgt aaaccacatt tcagtacaac gcgccgcttc
     1381 gtcaatggct tcatcaatta acttctgttc actaacaggc ggtttgccta acacaaaacc
     1441 gacaacttta tttttatcgc ccggatgacc gattccgatg cgtaaacggt gaaagttagg
     1501 gttattaccc aatttactga tgatgtcttt cagtccattg tgaccaccat ggccaccgcc
     1561 caatttaaat ttggcgacgc caggaggcag atccagttcg tcgtgggcca ccagaatttc
     1621 gtccggatta atgcggaaaa aactggccat cgccgcaacg gctttgccgc tgagattcat
     1681 aaatgtagtc gggactaaca ggcggacatc ttcgcctcca agagtgactc gcgaagtata
     1741 accaaagaat ttagcctctt cgcgcagcgg agcgcgcaaa cgctctgcca gtaagtcaac
     1801 gaaccaggca ccagcattat gtcgcgttgc ggcgtattca gcaccggggt tcgccaggcc
     1861 gacaatcaat ttaatcgtca cgtttttttg tcctgagtgt gtacataact ggcgcgtagt
     1921 ttactggttg cgaccccgct tgacaaaaaa ctgcgtatca aatgcagata acgtaataat
     1981 tgcctgagtg ggctattaga aagtcaaggt gttcaggcgt ttatttgtaa agttttgttg
     2041 aaataagggt tgtaattgtg atcacgcccg cacataaccc acagggtgtt gtctatactt
     2101 tacacataag gaagaggggt attccctgtt acaacccaga aagttccgga ggtgacatat
     2161 gaaacgcaaa aacgcttcgt tactcggtaa cgtgctcatg gggttgggtc tggtggtaat
     2221 ggtggtcggc gtggggtatt caatcctcaa ccagttacca cagtttaata tgccccagta
     2281 tttcgcacat ggtgcagtgc taagtatttt cgtcggtgcc attctctggc tggcgggtgc
     2341 ccgtgttggc gggcatgaac aggtgtgcga ccgttactgg tgggttcgcc actatgacaa
     2401 acgttgccgc cgtagcgata atcgccgtca tagctaacaa ataatgcagt ttgctgacca
     2461 gtcagtttgc gctgactggt caatctcgta cttataaatc cgccatcgcc gcgcgacgat
     2521 tcgggaagaa cgcgaggcgt cccgagattg gttgaatgcc tgcgcgagcc atagtgcgca
     2581 gtggctggaa ttccacgttg cacacgcgca gttcacatcc ttcgggcaga cgcttcacaa
     2641 aacgctggaa cgcatcaaga ccaccagcat caagtaccgg aacggcatcc cacttcagaa
     2701 tcacaatccg tttgccttca agacgtgact ccaggtccgt gaacaagcct tcagcagcag
     2761 caaaaaacag cgggccaata acgcgcagta ccagaacatc gtctggaaca tctacgacta
     2821 ccggtgccag gcgagtcata cgtgcgatac gacgcataaa cagcagcgat gccagcacga
     2881 tccccacgct gatggcaata accatatcaa acagcacggt cagcgacatg cacagcagca
     2941 tgacaatgat gtcatctttc ggtgcatgac gcagcaagtc gaccacttta tgcgcttcac
     3001 tcatgttcca cgccaccatc aacagcaggg ctgccatagc ggaaagcggc agccaggaga
     3061 gcagcggtgc cagtaccagc agggcaagaa taaccagaat agagtggatc accgctgaga
     3121 taggggaagt tgccccggca cggacgttag cggcagaacg cgcgatggca gctgtagcgg
     3181 taataccacc aaagaatgga gcgataatat tccccagtcc ctgtccaacc agttcgctgt
     3241 tcgccttgtg tttcgtcccg gtcataccat ccagtaccac ggcgcagagc agagattcga
     3301 ttgcgccgag cattgccatt gagaatgccg caggcagcag tgtgcgaata gaatcccagg
     3361 ttagcgtgaa ttctgaatta ggcagatccc acggcagcac cagttgcggc agcagttgcg
     3421 gaataccgtt accctgagaa ccatcggcca ggacgtagtg gaattgcgaa ccgatggtag
     3481 caacatgtcc gccgagcagg ttaacaatcc ccatcaccgc gcaaccagcc agcaaggccg
     3541 gaaggtgacc gggtaaacga atgcccagac gcggccaaaa aacaagaata cctagcgtca
     3601 caatgccaat ggcagcatca cccacattaa tggtcggcag cgccataaat aatgcgccga
     3661 ctttttgtag ataatgttcc gggacatggg ccatttgcag accgagaaaa tctttaatct
     3721 gcatggtacc gatggtgatc ccgatacccg aggtgaaacc taaggtgacg gaaaccggaa
     3781 tatactcaat caggcgacca aagcgtgcca gacccatcag aatcaaaaag atccccgaca
     3841 gcaaggccgc aaccagcagt cctgccagtc caaactgttg cgacacggga tagataatta
     3901 ccacaaatgc cgcagtcgga ccggaaacgc taaagcgtga cccacccgtc agagcaatga
     3961 caatccccgc aacagctgcg gtatataaac cgtactgggg tgccacacca ctaccaatag
     4021 ccaacgccat cgccagcggg atagcaataa tcccgacggt tatcccggca atcaggtcac
     4081 gggtaaaccg tgcggcagta tatttttctt tccagcaagc gtcgatcaga gcgcggaaag
     4141 gcatcacatg tgaggaaaat attttgttca caataatgtt tcatccgtga gcgcatcatc
     4201 tgtcaactaa atggcaggtg aaggaggcat aggtcataca aatggatatt acagacaaaa
     4261 aaacccgccg cagcgggtct ttgagccggg ttcgattagt gttcgaacat ggcagagatc
     4321 gattcttcgt tgctgatacg acgaatcgct tcggccagca tacctgacag ggtcagagta
     4381 cgcacgttcg gcagtgattt gatttcatcg ctcagcggaa tggtatcgca gacaacgact
     4441 tcatcaatta cagagttacg caggttgttc gccgcgttgc cagagaagat cgggtgagtc
     4501 gcgtacgcaa atacacgttt agcaccacgt tctttcagag cttcagcagc tttacacagc
     4561 gtaccgccag tgtcgatcat atcatcgacc agtacgcagt cacgacctgc aacgtcaccg
     4621 atgatatgca tcacctggga aacgttcgca cgcggacgac gtttgtcgat gattgccata
     4681 tcggtatcgt tcagcagctt agcgatagcg cgggcacgca caacgccgcc gatgtccgga
     4741 gaaaccacaa ttgggttatc cagattcagc tgcagcatgt cttccagcag gatcgggcta
     4801 ccaaatacgt tatcaaccgg aacgtcgaag aaaccctgaa tctgttcagc gtgcagatcc
     4861 actgtcagca cacggtcaac accgacgctg gagaggaagt ctgcaaccac tttcgcagtg
     4921 attggtacac gagcggaacg gacgcgacgg tcctggcgcg catagccaaa gtaggggata
     4981 acagcggtga tacgacctgc ggaagcacga cgcagggcat caaccataac gactaattcc
     5041 atcaggttgt cgttagtagg ggcacaagtg gactggatga tgaaaatatc accaccgcgt
     5101 acattttcat taatttgtac gctgacttcg ccatcgctaa agcgacctac agcggcgtcg
     5161 ccgagtgaag tgtacaggcg gttggcaata cgttgtgcta gttccggggt ggcgttacca
     5221 gcaaaaagct tcatatcagg cacgagaaga acctcaggca tgcgtccatt ggtggaaaga
     5281 atctgccgaa aactgtgcgg gccaggcatg atcctttcca ggcagtgtat taaagagcgc
     5341 gatgcaacgt ctggaacaag gtgacgttgt caccgaaact cagcttgccc ggcttaaagc
     5401 atggctctgt gcaatgggga aagattaacg cctttcgcca caaagccatt gagccattcc
     5461 ggggcttgct ctagcacctg gcgggcttca gactctgtat caaattcagc aaagacacag
     5521 gcccctgtcc cagtcaggcg cgacggggcg tattctaaca gccaggaaag caccgcatca
     5581 acctcgcgaa aacgttttct tgcgataacc tcgcaatcat tgctgaattc acattttagc
     5641 aacgtttcta ttgacctttt tggcgtattg cgcgggagtt caggatcttt aaaaatcacc
     5701 ggagtcggaa tacttacacc agggtgcgcc accagatacc acttctctgg cggatccacc
     5761 ggcgttagta tttcaccaac gccttcggca aacgcggcat gcccccgaac aaagacagga
     5821 acatctgcgc ccagcgtcag ccccatttcc gccagctcat ccatgcttag cccgcattgc
     5881 cagagatgat ttaatgccac caggaccgtc gcggcattgg atgaaccacc gccgagaccg
     5941 ccgcccatcg gcaaacgctt gtcaatgctg atattcgcac cgcttcccgt cggaagacgc
     6001 ccgctgtctg ccgcagtttt catcaacaat cgcgctgcgc gaacgatcag gttatcttca
     6061 tgttccacgc cttcaacggg cgttaacaga cgaatatccc catcgtcacg aagctcaatg
     6121 ctgatggtgt cgccgtaatc aagaaactga aacagcgttt gcagcgtgtg gtaaccatcc
     6181 gcacgctgac cggtaatgta taaaaacaga ttaagttttg ccggagaggg ccactgtgtc
     6241 cgcattattt cactatccag ttatccattt ttaacttgat gcgttgacca ccgtcggtga
     6301 gttccatatt ggctggcatc gcaggatgcg ttttggtgtc ataaccacca taaacaacct
     6361 tccagttttt gccattctgg ctgtaggtaa tttcgctcag gcggtactgg tcgtccagtt
     6421 tgtagtcggt tgcatcaccc ggtaaaccta aaatccactg gcgcaagctg ttgagcggaa
     6481 ttggcattcc ggtcaatttg ccaatcatct cttcggcgtc atcggcggta taacgctgac
     6541 ctttattgtc gactaactgc acgttacccg gttgagcatt cagctccagt tccgtgctgc
     6601 ccaatgggtt agtgagcagc agacggtagc gatcctggcc ggtttgctgc cagaaaaagc
     6661 gggcgtacac tttttgttgg tcagaaatat aagcgaacgc gccgcgagtc tgatactgat
     6721 taagattgcg cacgtcttgc tgatgctgac gccattgtgg cgaatccggg cttttgccag
     6781 gacctttggg cgtggtaacg gaacaggcag tgagcacaag agcagccagc ggtagcaggc
     6841 ggataagacg aaaatcgggc aggggcatag tgatgacaag tccttgagat acgttgcagt
     6901 tataaccctt aatgctagcg ttaccgtccg ctatcgtcta tgttcaagtt gtcttaattg
     6961 ccagaatcta acggctttcg gcaattactc caaaaggggg cgctctcttt tattgatctt
     7021 acgcatcctg tatgatgcaa gcagactaac tctatcaacg ttggtattat ttcccgcaga
     7081 catgaccctt ttagcactcg gtatcaacca taaaacggca cctgtatcgc tgcgagaacg
     7141 tgtatcgttt tcgccggata agctcgatca ggcgcttgac agcctgcttg cgcagccgat
     7201 ggtgcagggc ggcgtggtgc tgtcgacgtg caaccgcacg gaactttatc ttagcgttga
     7261 agagcaggat aacctgcaag aggcgttaat ccgctggctt tgcgattatc acaatcttaa
     7321 tgaagaagat ctgcgtaaaa gcctctactg gcatcaggat aacgacgcgg ttagccattt
     7381 aatgcgtgtt gccagcggcc tggattcact ggttcttggg gagccgcaga tcctcggtca
     7441 ggttaaaaaa gcgtttgccg attcgcaaaa aggtcatatg aaggccagcg aactggaacg
     7501 catgttccag aaatctttct ctgtagcgaa acgcgttcgc actgaaacag atatcggtgc
     7561 cagtgctgtg tctgtcgctt ttgcggcttg tacgctggcg cggcagatct ttgaatcgct
     7621 ctctacggtc acagtgttgc tggtaggcgc gggcgaaacc atcgagctgg tagcgcgtca
     7681 tctgcgcgaa cataaagtac agaagatgat tatcgccaac cgcactcgcg aacgtgccca
     7741 aattctggca gatgaagttg gcgcggaagt gattgccctg agtgagatcg acgaacgtct
     7801 gcgcgaagcc gatatcatca tcagttccac cgccagcccg ttaccgatta tcgggaaagg
     7861 catggtggag cgcgcattaa aaagtcgtcg taaccaacca atgctgttgg tggatattgc
     7921 cgttccgcgc gatgttgagc cggaagttgg caaactggcg aatgcttatc tttatagtgt
     7981 ggacgatctg caaagcatca tttcgcacaa cctggcgcag cgtaaagccg cagcggttga
     8041 ggcggaaact attgtcgctc aggaaaccag cgaatttatg gcgtggctgc gagcacaaag
     8101 cgccagcgaa accattcgcg agtatcgcag ccaggcagag cacgttcgcg atgagttaac
     8161 cgccaaagcg ttagcggccc ttgagcaggg cggcgacgcg caagccatta tgcaggatct
     8221 ggcatggaaa ctgactaacc gcttgatcca tgcgccaacg aaatcacttc aacaggccgc
     8281 ccgtgacggg gataacgaac gcctgaatat tctgcgcgac agcctcgggc tggagtagca
     8341 gtacatcatt ttcttttttt acagggtgca tttacgccta tgaagccttc tatcgttgcc
     8401 aaactggaag ccctgcatga acgccatgaa gaagttcagg cgttgctggg tgacgcgcaa
     8461 actatcgccg accaggaacg ttttcgcgca ttatcacgcg aatatgcgca gttaagtgat
     8521 gtttcgcgct gttttaccga ctggcaacag gttcaggaag atatcgaaac cgcacagatg
     8581 atgctcgatg atcctgaaat gcgtgagatg gcgcaggatg aactgcgcaa agctaaagaa
     8641 aaaagcgagc aactggaaca gcaattacag gttctgttac tgccaaaaga tcctgatgac
     8701 gaacgtaacg ccttcctcga agtccgagcc ggaaccggcg gcgacgaagc ggcgctgttc
     8761 gcaggcgatc tgttccgtat gtacagccgt tacgccgaag cccgccgctg gcgggtagaa
     8821 atcatgagcg ccagcgaggg tgaacatggt ggttataaag agatcatcgc caaaattagc
     8881 ggtgatggtg tgtatggtcg tctgaaattt gaatctggcg gtcatcgcgt gcagcgtgtt
     8941 cctgctacgg aatcgcaggg tcgtattcat acttctgctt gtaccgttgc ggtaatgcca
     9001 gaactgcctg acgcagaact gccggacatc aacccagcag atttacgcat tgatactttc
     9061 cgctcgtcag gggcgggtgg tcagcacgtt aacaccaccg attcggcaat tcgtattact
     9121 cacttgccga ccgggattgt tgttgaatgt caggatgaac gttcacaaca taaaaacaaa
     9181 gcgaaggcgc tttcagtgct cggtgctcgc atccacgctg ctgaaatggc aaaacgccaa
     9241 caggccgaag cgtctacccg tcgtaacctg ctggggagtg gcgatcgcag cgaccgtaac
     9301 cgtacttaca atttcccgca ggggcgcgtt accgatcacc gcatcaacct gacgctctac
     9361 cgcctggatg aagtgatgga aggtaagctg gatatgctga ttgaaccgat tatccaggaa
     9421 catcaggccg accaactggc ggcgttgtcc gagcaggaat aatggaatat caacactggt
     9481 tacgtgaagc aataagccaa cttcaggcga gcgaaagccc gcggcgtgat gctgaaatcc
     9541 tgctggagca tgttaccggc agagggcgta cttttattct cgcctttggt gaaacgcagc
     9601 tgactgacga acaatgtcag caacttgatg cgctactgac acgtcgtcgc gatggtgaac
     9661 ccattgctca tttaaccggg gggcgagaat tctggtcgtt gccgttattt gtttcgccag
     9721 cgaccttaat tccgcgcccg gatacggagt gtctggtgga gcaggcactg gcgcggttgc
     9781 ctgaacaacc ttgccgtatt cttgatctcg ggacgggtac cggggcgatt gcgcttgcgc
     9841 tggctagcga gcgcccggac tgcgaaatta tcgctgtaga tcgtatgcct gatgctgtct
     9901 ccctggcaca acgtaatgcc cagcatctgg cgatcaaaaa tatccacatt ctgcaaagcg
     9961 actggtttag cgcgctagcc gggcagcagt ttgcgatgat tgtcagcaat ccgccgtata
    10021 ttgacgagca ggacccacat cttcaacaag gcgatgtccg ctttgagccg ctcactgcgc
    10081 tggttgcggc agacagtgga atggcagaca tcgtgcatat catcgaacag tcgcgtaacg
    10141 cgctggtatc cggcggcttt ctgcttctgg aacatggctg gcagcagggc gaagcggtgc
    10201 gacaagcatt tatcctcgcg gggtatcatg acgtcgaaac ctgccgtgac tatggtgata
    10261 acgagcgcgt aacgctcggc cgctattatc aatgacaagt ttttctacac tgcttagtgt
    10321 tcatcttatt agtatcgcgc tttctgttgg gctattaacc ttacgtttct ggctacgtta
    10381 tcagaagcat ccacaggcat ttgctcgctg gacgcgcatt gtgccgccgg ttgtcgatac
    10441 ggtgttattg ttaagcggca ttgcgttgat ggctaaagcg cacatcctgc cattttccgg
    10501 gcaggcacag tggctgactg aaaagctgtt tggagttatc atttatatcg ttttgggttt
    10561 tattgcactc gattatcgtc gtatgcacag tcagcaggcg cgcattattg ccttcccgct
    10621 ggcgttggtg gtgctgtaca tcatcattaa actcgccacc acaaaagtac cgttactggg
    10681 gtaagtcatg agatcgttag ctgatttcga atttaataaa gcgccattgt gcgaaggcat
    10741 gatcctggct tgcgaagcaa tccgccgcga ttttccctcg caagatgttt acgacgaact
    10801 ggagcgtctc gttagtctgg cgaaggaaga aatcagccag cttctgcctt tagaagagca
    10861 gctggaaaaa ctgatcgcgc tgttttacgg cgactgggga tttaaagcct cacgcggcgt
    10921 ttatcgtctt tccgatgcat tatggctgga cccggtgtta aagaatcgac agggcagtgc
    10981 ggtatcatta ggtgcggttt tattatgggt cgcgaatcgt ctcgatttgc cgctgctgcc
    11041 ggtgattttc cctacgcagc tgatattgcg cattgaatgt ccggatggcg aaatttggct
    11101 gattaatcct tttaacggtg aatcgttaag cgaacatatg ctggacgtat ggttaaaggg
    11161 aaatatcagc ccgtcggcgg aactgtttta tgaagacctt gatgaagctg ataacattga
    11221 ggtaatccgc aaattgctgg atacactcaa agcctcgttg atggaagaaa atcagatgga
    11281 gctggcgtta cgcaccagcg aagctttatt acaattcaac cctgaagatc cctatgaaat
    11341 tcgcgatcgc gggttgattt atgcgcaact ggattgcgaa cacgttgcgt tgaacgattt
    11401 aagttatttc gttgaacagt gtccggaaga cccgatcagc gaaatgatcc gtgcgcaaat
    11461 aaataacatc gcgcataaac atattgtgct gcattaatta atcgacattt tactcaagat
    11521 taaggcgatc ctatgaaaca aaaagtggtt agcattggcg acatcaacgt agcaaatgac
    11581 ctgccgttcg tactgtttgg cggtatgaac gtgctggaat ctcgcgatct ggcgatgcgc
    11641 atttgcgagc actacgtaac tgtgacccag aaactgggta tcccttacgt gttcaaagcc
    11701 tcttttgaca aagccaaccg ctcctccatc cactcttatc gtggaccggg cctggaagaa
    11761 gggatgaaaa tcttccaaga gttgaagcag acttttggcg tgaaaattat caccgacgtt
    11821 cacgaaccaa gtcaggcaca gcccgttgct gatgtcgtgg atgtgattca gttgccggcg
    11881 tttcttgctc gccagactga cctggttgaa gccatggcga aaaccggtgc ggtaattaac
    11941 gtcaagaaac cacagtttgt cagcccggga cagatgggta atatcgttga taaattcaaa
    12001 gaaggcggca acgaaaaagt gattctttgc gatcgtggtg ctaacttcgg ctatgacaac
    12061 ctggttgtcg atatgctggg cttcagcatt atgaagaaag tgtctggtaa ctcgccggtg
    12121 attttcgacg tgacccacgc actgcaatgc cgcgatccgt ttggcgcagc ttccggtggt
    12181 cgtcgtgctc aggtggctga gctggcacga gccggtatgg cggtaggtct ggcggggctg
    12241 tttattgaag cgcatccgga tccggaacat gcgaaatgtg atggtccatc cgcgctgccg
    12301 ctggctaaac tggaaccgtt cctcaagcag atgaaagcga ttgatgatct ggtgaaaggt
    12361 ttcgaagaac tggataccag caagtaatct tttttgcttg aaaaataaag tcttagcgtt
    12421 ctgcgttaag acttttttca tgggtgccag atacaaaaaa ggccgcaggc tgttacccct
    12481 gcggccggtt tcgggcgcat attgccatca cggcagcctg acgcccgttt tcaccttact
    12541 tccggttacg ccaccagccg acaatcgctg cggtaataat tcccgccagg atcggtgctg
    12601 ccaggtcgtg ccagaaaatc atggcaaact gcgcgagcgt catatagccg ccttgttgta
    12661 atgataacat tttgcggcta ttcttgaatt gttctggttc aagattagcc cccgttctat
    12721 tgtcaggtta aacctctcaa cgtgcggggg ttttctcttt ccagcaacca atgccaccag
    12781 ggataaagcc cccgcaacat tgcgcctcac cggataacgc cggcttgatg tggatactac
    12841 gtctcaattc atcttcactt catccctgaa atgtttgcaa tgaagagtgc attccggttt
    12901 ttcaacagct gttacagtcg tttcatgagt gctctggatg atgcttccag ctcgggttgc
    12961 caatatttac ttgtggaaga gataaagaca aaaatggccg caggctgtta cccctgcggc
    13021 cggtttcggg cgcatattgc catcacggca gcctgacgcc cgttttcacc ttacttccgg
    13081 ttacgccacc agctgacaat cgctgcggta ataatccccg ccaggatcgg tgctgccagg
    13141 tcgtgccaga aagtcatggc aaactgcgcg agcgtcatat agccgccttg ttgtaatgac
    13201 aacattttgc ggctattctt gaagtgtctg gtttcaagat tagcccccgt tttgttgtca
    13261 ggttttacct ctcaacgtgc gggggttttc tctttccagc aaccaatgcc accagggata
    13321 aagcccccgc aacattgcgc ctcaccggat aattccggct tggtgtggat actacgtctc
    13381 aattcatctt cacttcatcc ctgaaatgtt tgcaataaag agtacattcc ggcttttcaa
    13441 cagctgttgc agtggtttcg tgcaggttgt ggtacaggct cgcaattctg attaacgagc
    13501 tgtccaggta gtatgaagaa atacaataag caggaattta tcttatctcc cccgatttcc
    13561 gtcatcggag gagatataac tgtcaggcaa atatcgtcat caaataggcg gcaaacagtg
    13621 ccagatgcgc tgcgccattg agcacgttag tacgtccggt ggagaaggag atatggcaca
    13681 gcactaaaga ggccaccatc accaccattt ctggcgcacc aagtgcaaac tgtaattcgt
    13741 tacccgtcat aaaggcaatt agcgtgacga caggtacggt aagtgaaatg gttgctaaca
    13801 ctgaaccaaa gaacagattc atcgcgcgct ggacctggtt gttcaacact gcttttaacg
    13861 cacctaaacc ttccggcgac agaatcaaca gagccaccag gaagccagta aaggcgacag
    13921 gggcattcat gctgtcgagc aatgtctcca gcgggctggc attcattttg gtgactgcaa
    13981 taacggcaat cagatggata atcaaccaga tagcatgcca cacgctgcta tgggcagacg
    14041 gtttaccgtg atgcgggtcg tcgtcatcac tgtcatcttc gtgctcgtag acaaacaaac
    14101 tttgatgcgt tttggtctgg atcagcaaaa atacgccata cattgccgca gaaattaatg
    14161 ctaccagtaa cgcctgaccg gttgaaaaat tcgccgcagg cagagccatt ggaaatacca
    14221 gtacgattat cgccaggggg aacagcgcaa ttaaatactg cttgatacca aacagattca
    14281 tatattgggt ggcaaactta cgaccgccca acaataatga aaagccaacc agcccaccgg
    14341 taacaatcat aatgattgaa tagagcgtat cacgcattag cgttggcgcg gcgtcgccgg
    14401 ttgccattaa agctgaaatc aaactgactt caagaataac cactgaaagg ctaagaataa
    14461 gcgaaccgta aggttctccc aagcgatggg ctaatacgtc cgcatgacgg acaacactaa
    14521 aggcgctact taaaatacca ataagcgcaa gaagattgat ggcaatgacc actggtagtg
    14581 tctggctgct tccccacagg aacagcacta ccagcgccag aaccgggaaa ataagcgaaa
    14641 tctccttgtg gcgggttttt accgcctctt gagcatttga cattatggtt atccctttgc
    14701 agatgaattt atcgaaaatg taaaaaatag gtaggaaaaa taacagaaag tgtctggata
    14761 tcggtaacat tttacgaatt tttaccccac tgtcgatttt ttactcattg ggacataaaa
    14821 ataagtatta cgtttagaca atgtttgttt tagcgtttct taagaacagt ctgacatgaa
    14881 aattcttatg ttttggcaag agtagatatt gttgaccaca cttaatgttc aactttgtaa
    14941 aaggagtcaa cgatgccgta taaaacgaaa agcgatctgc cggaaagcgt aaagcacgtt
    15001 ctaccgtctc atgcccagga tatctataaa gaagcgttca acagcgcatg ggatcaatat
    15061 aaagataaag acgatcggcg tgatgacgcc agtcgcgaag aaaccgcgca taaagtggcc
    15121 tgggctgctg tgaagcatga atatgccaaa ggggatgatg ataaatggca taaaaaatcg
    15181 taaaaccggt agcttagtta aagctattcg tgcggtgttg ccttgcaagt ggtccgtgga
    15241 ttgcatattg tcccgttagt ggtttcaaaa tgagcagtaa aaatgtccgg aagacaccaa
    15301 aaagttgtcg cagggaagta tgcagtggcg gaggtgtaag gtgataacgc gtgatttctt
    15361 gatgaatgcc gattgtaaaa cggcatttgg tgccattgaa gaatcactct tatggtcagc
    15421 agagcaacga gcggcttcgc tggcggcgac gctggcttgt cgacctgatg agggaccggt
    15481 gtggatcttc ggttatggat cgttgatgtg gaatccggca ctggagttta ccgagtcgtg
    15541 caccggtaca ctggttggat ggcatcgcgc gttttgcctg cgcctgaccg ccgggcgcgg
    15601 gactgcgcac cagccgggac ggatgcttgc actgaaagag ggcggacgca ctacaggcgt
    15661 cgcctatcga ctgccagaag agacgctgga gcaggaacta accctgttgt ggaagcgcga
    15721 gatgattacc ggctgttatc tgccaacctg gtgtcagctt gatcttgatg atggatgcac
    15781 agtaaacgcc attgtgttta ttatggaccc gcgacatcca gaatatgaat ctgacactcg
    15841 cgctcaggtc atcgcgccgt tgattgcggc ggcgagcggt ccgctgggaa ccaacgcaca
    15901 atacctgttt tcactggaac aggagcttat caaactggga atgcaggacg atgggctgaa
    15961 tgatttgctg gtatcggtaa aaaaactgct ggcggagaat tatccggatg gtgtgttacg
    16021 gccgggattc gcctgagtaa acttcccgca tagtggggcg tcagacgccc cctcaaacat
    16081 taaaatgtga gcactttatc ggctgacagc gtccattgcg ccagttccac aagagtaccg
    16141 atttccaccc catcaatcag aggaagtgta ctaatcccgc gcccgtcggt acaggttttg
    16201 cacaatttca ccggtacatt ctgagcggta aggatctcca gcatttgctg aatgttgtag
    16261 ccttcccctg gtttttgccc gcgcaacccg gctgtgaccg catcagacat gaggaacaga
    16321 cgcagatcca gattgctctc ctgctctcgt aacgcaatgg ccagccgcaa gctgttaaac
    16381 aaggattcgc tcccgtaagg tgcgccattg gcaacgatca cgattttttg cattatttac
    16441 tcctgtattc agggaattag acactcatct tctatcttac tgcttctgca gcgtctgacc
    16501 aatcggtcac atttttaagg attttcctga aagcgcgaga aaatacgaca aaagttgcca
    16561 gtaatcgtta ttctttaagg ctatggtttt cattattacc ggaagttacc gacgttttga
    16621 gccgtttcgt tcctcgcatt atcccgtttt atttactctt gcttgtagca ggcggtacag
    16681 ctaacgcaca atctaccttc gagcaaaaag cggcaaatcc ctttgataat aacaatgatg
    16741 gtctgccgga tttaggcatg gctcccgaaa atcatgatgg ggaaaaacac tttgctgaaa
    16801 ttgtgaaaga tttcggcgaa accagtatga atgataacgg gctggatact ggcgagcagg
    16861 caaaagcttt cgcattggga aaagtccgcg acgcgcttag tcaacaggtt aatcagcacg
    16921 tagagtcctg gctatcaccg tggggaaatg ccagtgttga cgtcaaagtg gataacgaag
    16981 gacatttcac cggcagtcgt ggaagctggt ttgtgccgtt acaagataat gatcgttatt
    17041 tcacctggag ccagcttggt cttactcagc aggataatgg gttggtgagc aatgtgggcg
    17101 ttgggcaacg ctgggcgcgc ggcaactggc tggtgggtta taacactttt tatgacaact
    17161 tgctggacga aaatcttcag cgagcgggct ttggtgccga agcgtggggc gaatatttgc
    17221 gattattggc aaacttttat cagccgtttg ctgcatggca tgaacagaca gccacgcagg
    17281 aacaacggat ggcgcgcggg tacgacctga cagctcggat gcgcatgccg ttctatcaac
    17341 acctcaatac cagtgtcagc ctagaacagt attttggtga tcgtgttgat ttgtttaact
    17401 ctggtacggg ttatcacaat cccgtcgcgt tgagtctggg attaaattac acccctgtgc
    17461 cattagtcac tgtgacggcc cagcataaac agggtgaaag tggcgagaat caaaataacc
    17521 tcgggctgaa tcttaattac cgctttggtg taccgctcaa aaaacaactt tctgcgggcg
    17581 aggttgccga aagtcagtcg ttacgtggta gtcgctatga caatccgcag cgaaataatc
    17641 taccgactct tgagtaccga cagcgaaaaa cgttaacggt gtttctggcg acaccgccgt
    17701 gggatctaaa acctggcgaa acagtgccgc tgaaattaca aatccgcagt cgttacggta
    17761 ttcggcaact gatttggcag ggcgatacgc agatattaag tttgacgccg ggcgcacaag
    17821 ccaacagcgc ggagggctgg acgctgatca tgcctgactg gcagaacggg gaaggggcaa
    17881 gcaatcactg gcgattgtcg gtggtggtgg aatataacca ggggcagcgt gtctcctcca
    17941 atgagatcac gctaacgctt gtcgaaccgt tcgatgcatt gtcaaacgac gaactgcgct
    18001 gggaaccgta atcagaaaat gcgctcctga tgcacccata ccgctgcttc cacgcgagac
    18061 ttgagcttca ttttcttcag catgtgcttg acgtgcactt ttactgtgct ttcggtgata
    18121 tccaggcggc gggcaatcat cttgttcggc aaaccctggg caatcagctt gagaatatcg
    18181 cgctcgcgtg gggttaactg gttaacatcg cgctcagtag tggcacggtt agcgcgcaag
    18241 ctggcggcca gaacaggcgt taatgcttcg cttaatacca tttcgccagc agctgcctga
    18301 tgcaatgctt tcagcagatc ttccggttcc atatctttta acagataacc atccgcgccg
    18361 cgtttcagtg cggtgaccac atcttcttca tggttagaga cgctgaatac cacaatgcgc
    18421 cctgagaggg acttttcgcg cagtttatcc agcgtttcca gaccgttcat gccgggcata
    18481 ttgagatcta acaggatcag atcgggatca agagactccg ccagttcaat accctgttcg
    18541 ccattactcg cttcgccaac cacggtgata tctggtgcca tactgataag ctgttttacg
    18601 ccagttcgca gcatcgggtg atcgtcgatc agcaggatag tagccggttc ctgattactc
    18661 atgggtatct ccttggacgt ctgtgaaagt tttttcggga ataaaggtga ccaccacttc
    18721 ggtgccacct gattcacgac ggcggacgcg gcaatcgcct cgtaaacttt gcgcacggtc
    18781 gcgcattatt atcatgccgt agtgattgct gcggatggca ttttcaggca cgccgcagcc
    18841 gttatcttgg acggtcagtt tgacctgatt atcgttttgc gccaccgtca ccacgacctc
    18901 actcgcttgc gaatgtttga gggcgttact taatgcctca cgggcaattt gcaacaagtg
    18961 gattgcctga tgtgaaggca ccagacgagg cggcaattga taatccagct tcaccgggaa
    19021 gccaaatttg gcgctgtact cttcgcaact cgcctccagc gccggacgta atccaggctc
    19081 ggtgagctgc aagcggaatg tggtgagcaa ttcacgcaac tgcgcccagg atgcattcag
    19141 ttcgttacgg atctgactta acagttcgcg gctgcttgct ggcagcgcat cgccctgcat
    19201 ctgtaaacaa ctcacctgca tcttcatgca agagagagat tgggcaatag aatcatgcag
    19261 ttcgcgcgca atggtggcac gctcttccat cacgatcaac tgttgctgac gttcctgatg
    19321 gcgatccagc gccagcgtgg cggtgagttg ttcaaccagg gtatccacca gttgttgttg
    19381 atcatggcta agatgacgcc cctgcggcag ggtcgccagc aaaataccgt actgcgtatg
    19441 agagtcagcc agccgccact tcagggttgt gccgcgatca ccaacgggta atacgccgcg
    19501 cgggcagagc tggcagcctt tatcatcaca agtcatatct ggctggcagg taaactcctg
    19561 atgattctct tcatcatcag tgtcatacac ccgcagttcg atatcacgta gcagggttaa
    19621 attctgtaag ccgttgagta caggtgacag gcgttcacac agcggggcgc gggaatgcaa
    19681 acggcggtta gcctgccata aaaaagagag gatctgattt ttatgctcca gcccggcggt
    19741 tttctcctga acccgctgct caagtacggc ataactttcg gccagttctg cagacatatt
    19801 gttcaatgca gttccaagca tcgccatttc gttgcgcccg ctgatgttcg cgcgttgggt
    19861 aaaatcgcga tgactgacgg cactcgccat tgccagcagt tgccgccacg gttgtagcag
    19921 tcgcgcccgc aaccagataa tagtgaacac cagtaaaagt gccataaata ccgccattac
    19981 ccgatggacc agtaccactg tctcaatgcg catttccgtg gtgcggtcaa aaccagatac
    20041 cagctgatca agcccggcaa caaactggct gacatccgct gacaccgttt cgcggttttg
    20101 tgcacgcatc agtgcaggga tcagttcatt acgccagtaa tcttgtaaac cctgtaattg
    20161 cgccagttgt tcgtctcgtt ctgctgctcg agttaactcg gcgctaaatg ccgtttgttc
    20221 catctcttta attaagggct tgtctttctc acttaatggc actgccgcca acagacggta
    20281 actttgcatg cgcagcgatc ccgctttgtt gatcgcatgg gcgctgccct gaacgccttg
    20341 caccagccag ccagaaaccg ccatccctgc cagtccaata gcagtagaaa gcaacacaat
    20401 aagcgcaacc tgattaacca gggtgagcgg agagagacaa cgtttaagca tgtaaacctc
    20461 ttccttcagg ctttaaatga gcaataacct taatgaatgt gacgatacat tctggaatgg
    20521 cagtattctc ggctattggc tgaagtatac ccatacccgg aaagagttac tccttatttg
    20581 ccgtgtggtt agtcgcttta catcggtaag ggtagggatt ttacagcacc gtgaaaaatc
    20641 tcataatttt tatgaaatca ctgtactcac tatgggtatt gataaatatc aatgatagat
    20701 aaagttatct tatcgtttga tttacatcaa attgccttta gctacagaca ctaaggtggc
    20761 agacatcgaa acgagtatca gaggtgtcta tgagtcactc atccgccccc gaaagggcta
    20821 ctggagctgt cattacagat tggcgaccgg aagatcctgc gttctggcaa caacgcggtc
    20881 aacgtattgc cagccgtaac ctgtggattt ccgttccctg tctgctgctg gcgttttgcg
    20941 tatggatgtt gttcagcgct gttgcggtga acttaccgaa agtcggtttt aattttacga
    21001 ccgatcagct atttatgttg actgcgctgc cttcggtttc tggcgcgtta ttacgtgttc
    21061 catactcctt tatggttcct atcttcggtg gtcgtcgctg gacggcgttc agcaccggta
    21121 ttctgattat tccttgcgtc tggctgggtt ttgccgtgca ggatacctcc acgccttata
    21181 gcgtcttcat catcatctct ctgctatgcg gctttgctgg cgcgaacttc gcatccagta
    21241 tggcaaacat cagcttcttc tttccgaaac agaagcaggg tggcgcgctg ggtctgaatg
    21301 gtggtctggg aaacatgggc gtcagcgtca tgcagttggt tgctccgctg gtggtatcac
    21361 tgtcgatttt cgcagtattt ggtagccagg gcgtcaaaca gccggatggg actgagctgt
    21421 atctggcgaa tgcgtcctgg atatgggtgc cgttccttgc catcttcacc attgcggcgt
    21481 ggtttggcat gaacgatctt gctacctcga aagcctccat caaggagcag ttgccggtac
    21541 tcaaacgggg tcatctgtgg attatgagcc tgctgtatct ggcaaccttc ggctccttca
    21601 tcggcttctc cgcgggcttt gcaatgctgt caaaaacgca gttcccggat gttcagattc
    21661 tgcaatacgc tttcttcggg ccgtttattg gtgcgctggc gcgttctgca ggtggtgcat
    21721 tatctgaccg tctgggcgga actcgtgtca cgctggtgaa ctttattctg atggcgattt
    21781 tcagcggcct gctgttcctg accttaccga ctgacgggca gggcggaagc ttcatggcgt
    21841 tcttcgcggt cttcctggcg ctgttcctga cagctgggct gggtagtggt tccactttcc
    21901 agatgatttc agtgatcttc cgtaaactga caatggatcg cgtgaaagca gaagggggtt
    21961 ctgacgaacg tgcgatgcgt gaagcggcaa ccgacacggc ggcggcgctg ggtttcatct
    22021 ctgcgattgg cgcgattggt ggcttcttta tcccgaaagc gtttggtagc tcgctggcat
    22081 taacgggttc gccagtcggc gcaatgaagg tatttttgat tttctatatc gcctgcgtag
    22141 tgattacctg ggcggtatat ggtcggcatt ctaaaaaata aaccgttact cgtcatactc
    22201 cgggttacat gtgctgcggc tgcgttcatt caccccagtc acttacttta gtaagctcct
    22261 gggattcatt cacttgccgc cttcctgtaa accgaattat atagagtaaa atatttgatt
    22321 atcctttgcg cggcatgatg tcgcgctttt tttaagcgtt atttagttac aacatactaa
    22381 tgttatatgg tttatttcgc cggatttcat taagagccat taatatgttc cccatgggga
    22441 atactcctta atacccatct gcataaaaat cttaatagtt taaataacta caggtataaa
    22501 acgtcttaat ttacagtctg ttatgtggtg gctgttgatt atcctaaagg ggtatcttag
    22561 gaatttactt tatttttcat ccccatcact cttgatcgtt atcaattccc acgctgtttc
    22621 agagcgttac cttgccctta aacattagca atgtcgattt atcagagggc cgacaggctc
    22681 ccacaggaga aaaccgatga gtaaattcct ggaccggttt cgctacttca aacagaaggg
    22741 tgaaaccttt gccgatgggc atggccagct tctcaatacc aaccgtgact gggaggatgg
    22801 atatcgccag cgttggcagc atgacaaaat cgtccgctct acccacgggg taaactgcac
    22861 cggctcctgc agctggaaaa tctacgtcaa aaacggtctg gtcacctggg aaacccagca
    22921 gactgactat ccgcgtaccc gtccggatct gccaaaccat gaacctcgcg gctgcccgcg
    22981 cggtgccagc tactcctggt atctttacag tgccaaccgc ctgaaatacc cgatgatgcg
    23041 caaacgcctg atgaaaatgt ggcgtgaagc gaaggcgctg catagcgatc cggttgaggc
    23101 atgggcttct atcattgaag acgccgataa agcgaaaagc tttaagcagg cgcgtggacg
    23161 cggtggattt gttcgttctt cctggcagga ggtgaacgaa ctgatcgccg catctaacgt
    23221 ttacaccatc aaaaactacg gcccggaccg tgttgctggt ttctcgccaa ttccggcaat
    23281 gtcgatggtt tcttacgcat cgggtgcacg ctatctctcg ctgattggcg gtacttgctt
    23341 aagcttctac gactggtact gcgacctgcc tcctgcgtct ccgcaaacct ggggcgagca
    23401 aactgacgta ccggaatctg ctgactggta taactccagc tacatcatcg cctggggttc
    23461 aaacgtgccg cagacgcgta ccccggatgc tcacttcttt actgaagtgc gttacaaagg
    23521 caccaaaact gttgccgtca caccagacta cgctgaaatc gccaaactgt gcgatctgtg
    23581 gctggcaccg aaacagggca ccgatgcggc aatggcgctg gcgatgggcc acgtaatgct
    23641 gcgtgaattc cacctcgaca acccaagcca gtatttcacc gactatgtgc gtcgctacac
    23701 cgacatgccg atgctggtga tgctggaaga acgcgacggt tactacgctg caggtcgtat
    23761 gctgcgcgct gctgatctgg ttgatgcgct gggccaggaa aacaatccgg aatggaaaac
    23821 tgtcgccttt aataccaatg gcgaaatggt tgcgccgaac ggttctattg gcttccgctg
    23881 gggcgagaag ggcaaatgga atcttgagca gcgcgacggc aaaactggcg aagaaaccga
    23941 gctgcaactg agcctgctgg gtagccaaga tgagatcgct gaggtaggct tcccgtactt
    24001 tggtggcgac ggcacggaac acttcaacaa agtggaactg gaaaacgtgc tgctgcacaa
    24061 actgccggtg aaacgcctgc aactggctga tggcagcacc gccctggtga ccaccgttta
    24121 tgatctgacg ctggcaaact acggtctgga acgtggcctg aacgacgtta actgtgcaac
    24181 cagctatgac gatgtgaaag cttatacccc ggcctgggcc gagcagatta ccggcgtttc
    24241 tcgcagccag attattcgca tcgcccgtga atttgccgat aacgctgata aaacgcacgg
    24301 tcgttcgatg attatcgtcg gtgcggggct gaaccactgg tatcacctcg atatgaacta
    24361 tcgtggtctg atcaacatgc tgattttctg cggctgtgtc ggtcagagcg ggggcggctg
    24421 ggcgcactat gtaggtcagg aaaaactgcg tccgcaaacc ggctggcagc cgctggcgtt
    24481 tgcccttgac tggcagcgtc cggcgcgtca catgaacagc acttcttatt tctataacca
    24541 ctccagccag tggcgttatg aaaccgtcac ggcggaagag ttgctgtcac cgatggcgga
    24601 caaatcccgc tataccggac acttgatcga ctttaacgtc cgtgcggaac gcatgggctg
    24661 gctgccgtct gcaccgcagt taggcactaa cccgctgact atcgctggcg aagcggaaaa
    24721 agccgggatg aatccggtgg actatacggt gaaatccctg aaagagggtt ccatccgttt
    24781 tgcggcagaa caaccagaaa acggtaaaaa ccacccgcgc aacctgttca tctggcgttc
    24841 taacctgctc ggttcttccg gtaaaggtca tgagtttatg ctcaagtacc tgctggggac
    24901 ggagcacggt atccagggta aagatctggg gcaacagggc ggcgtgaagc cggaagaagt
    24961 ggactggcag gacaatggtc tggaaggcaa gctggatctg gtggttacgc tggacttccg
    25021 tctgtcgagc acctgtctct attccgacat cattttgccg acggcgacct ggtacgaaaa
    25081 agacgacatg aatacttcgg atatgcatcc gtttattcac ccgctgtctg cggcggtcga
    25141 tccggcctgg gaagcgaaaa gcgactggga aatctacaaa gccatcgcga agaaattctc
    25201 cgaagtgtgc gtcggccatc tgggtaaaga aaccgacatc gtcacgctgc ctatccagca
    25261 tgactctgcc gctgaactgg cgcagccgct ggatgtgaaa gactggaaaa aaggcgagtg
    25321 cgacctgatc ccaggtaaaa ccgcgccaca cattatggtc gtagagcgcg cttatccggc
    25381 gacttacgaa cgctttacct ctatcggccc gctgatggag aaaatcggta atggcggtaa
    25441 agggattgcc tggaacaccc agagcgagat ggatctgctg cgtaagctca actacaccaa
    25501 agcggaaggt ccggcgaaag gccagccgat gctgaacacc gcaattgatg cggcagagat
    25561 gatcctgaca ctggcaccgg aaaccaacgg tcaggtagcc gtgaaagcct gggctgccct
    25621 gagcgaattt accggtcgtg accatacgca tctggcgctg aataaagaag acgagaagat
    25681 ccgcttccgc gatattcagg cacagccgcg caaaattatc tccagcccga cctggtctgg
    25741 tctggaagat gaacacgttt cttacaacgc cggttacacc aacgttcacg agctgatccc
    25801 atggcgtacg ctctctggtc gtcagcaact gtatcaggat caccagtgga tgcgtgattt
    25861 cggtgaaagc ctgctggttt atcgtccgcc gatcgacacc cgttcggtga aagaagtgat
    25921 aggccagaaa tccaacggca acccggaaaa agcgctcaac ttcctgacgc cgcaccagaa
    25981 gtgggggatc cactccacct acagcgacaa ccagttgatg ctgaccttag gtcgcggtgg
    26041 cccggtggtc tggctgagcg aagccgatgc caaagagctg ggcattgccg ataacgactg
    26101 gattgaagtt tacaacagca acggtgcgct gactgcccgt gcggttgtca gccagcgtgt
    26161 tccggcaggg atgaccatga tgtaccacgc gcaggaacgt atcgttaacc tgccgggttc
    26221 ggaaattact ggccagcgtg gggggatcca caactcggtc acccgtatca cgccgaaacc
    26281 gacgcatatg attggtggct atgcccatct ggcatacggc tttaactact acggcaccgt
    26341 aggttctaac cgcgatgagt ttgttgtagt gcgtaagatg aagaacattg actggttaga
    26401 tggcgaaggc aatgactagg tacaggagag cgtaaaatga aaattcgttc acaagtcggc
    26461 atggtgctga atctcgataa gtgcatcggc tgccacacct gttcagttac ctgtaaaaac
    26521 gtctggacca gccgtgaagg cgtggagtac gcgtggttca acaacgtgga aaccaagccg
    26581 ggtcagggct tcccgactga ctgggaaaac caggaaaaat acaaaggcgg ctggatccgt
    26641 aaaatcaacg gcaaactgca gccgcgcatg ggtaaccgtg ccatgttgct gggtaaaatc
    26701 ttcgctaacc cgcatctgcc ggggatcgac gattattacg agccgttcga ttttgactat
    26761 cagaacctgc ataccgcgcc ggaaggcagc aaatcgcagc cgattgcccg tccccgttcg
    26821 ctgattaccg gggaacggat ggcgaaaatc gaaaaagggc cgaactggga agatgacctg
    26881 ggtggtgagt ttgacaaact ggcgaaagac aagaacttcg acaacatcca gaaggcgatg
    26941 tatagccagt tcgaaaacac ctttatgatg tatttgccgc gcctgtgcga acactgcctg
    27001 aacccggcat gtgtggcgac ctgcccgagc ggtgcgattt acaagcgtga agaagatggc
    27061 atcgtcctga tcgaccagga taaatgccgt ggctggcgta tgtgcatcac cggatgcccg
    27121 tacaaaaaaa tctacttcaa ctggaagagc ggtaagtctg agaagtgcat cttctgctat
    27181 ccgcgtattg aagcgggtca gccgaccgtg tgctcagaaa cctgtgtcgg tcgtatccgt
    27241 tatcttggcg tgctgctgta cgatgccgac gcgattgaac gtgcagccag caccgagaac
    27301 gagaaagatc tttaccagcg tcagctggag gtgttcctcg atccgaacga tccgaaagtc
    27361 atcgagcagg cgattaaaga cggtattccg ctgagcgtta ttgaagccgc acagcagtcg
    27421 ccggtttata aaatggcaat ggaatggaaa ctggcgctgc cgctgcatcc agaatatcgc
    27481 acactgccga tggtctggta cgtgccgcct ctgtctccga ttcagtctgc agcagacgcg
    27541 ggtgagctgg gtagcaacgg cattctgcca gacgtcgaaa gcttgcgtat tccggtacag
    27601 tatctggcga atctgctgac cgccggtgat accaaaccgg tactgcgcgc actgaaacgt
    27661 atgctggcga tgcgtcatta caaacgtgct gaaaccgttg acggtaaagt tgatacccgt
    27721 gcgctggaag aggtcggtct gaccgaagcc caggcacagg agatgtaccg ttatctggct
    27781 attgctaact acgaagatcg ctttgtggtg ccgagtagtc atcgtgaact ggcacgggaa
    27841 gccttcccgg agaaaaatgg ctgcggcttt acctttggtg atggctgcca cggctcagat
    27901 accaaattca atctgttcaa cagccgtcgt atcgatgcca tcgatgtgac cagcaaaacg
    27961 gagccgcatc catgatcgaa ctcgtgattg tatcgcgtct ccttgaatat ccggatgctg
    28021 ccttatggca gcatcaacaa gagatgtttg aggtgattgc tgcgtcgaaa aatctgtcga
    28081 aagaagatgc ccatgcgctg ggcattttcc tgcgcgattt aacggcgatg gatccgctcg
    28141 atgcccaggc ccagtacagc gaactgttcg accgtggccg cgccacgtca ctgttgctat
    28201 ttgaacatgt tcacggtgaa tcccgtgacc gcggccaggc gatggtggac ctgctggcgc
    28261 agtacgagca gcacggcttg cagttaaaca gccgcgaatt accggaccat ctgccgctgt
    28321 atctggagta cctgtcgcag ctgccgcaaa gcgaagccgt ggaaggtttg aaagatatcg
    28381 cgccgattct ggcattgctg agcgcgcgtc tgcaacagcg tgaaagccgt tatgccgtga
    28441 tgtttgatct gctgctgaaa ttggccaata ccgctatcga cagcgacaaa gtggcggaaa
    28501 aaattgccga cgaagcgcgc gatgatacgc cgcaggcgct ggatgctgtc tgggaagaag
    28561 agcaggttaa attctttgct gacaaaggct gcggtgattc agcaatcact gctcatcagc
    28621 gtcgctttgc cggtgccgtc gcgccgcaat atctgaatat caccaccgga ggacagcact
    28681 aatgcaattc ctgaatatgt tcttctttga tatctacccg tacatagccg gggcggtctt
    28741 cctgattggt agctggctgc gttatgacta cgggcagtac acctggcgcg cggcgtccag
    28801 ccagatgctg gatcgcaaag ggatgaacct ggcgtcgaac ctgttccata tcggtattct
    28861 ggggattttt gctggtcact tcttcggtat gctgacgccg cactggatgt atgaagcctg
    28921 gctgccgatt gaagtgaaac agaaaatggc gatgtttgct ggtggtgcca gcggcgtgct
    28981 gtgtctgatt ggcggcgtgc tgttgctgaa gcgtcgtctg ttcagcccac gcgtgcgtgc
    29041 aaccactacc ggagcggata tcctgatcct gtcgctgctc gttatccagt gcgcgctggg
    29101 cctgttgacc attccgttct ccgctcagca tatggacggt agcgagatga tgaaactggt
    29161 tggctgggcg cagtcggtgg tgaccttcca cggtggcgct tctcaacacc tcgatggtgt
    29221 ggcgtttatc ttccgtctgc acctggtgct ggggatgacg ttattcctgc tgttcccgtt
    29281 ctcgcgtctg gtacacatct ggagcgtacc ggtggagtat ctgacacgta agtaccagct
    29341 ggtgcgcgct cgtcactaaa cgaattttag ttcacataga ccctgcttcg gcggggtttt
    29401 ttatgggcac ggtgcggggt gagttgtcgg atgcgcttcg cttatccgac ctacagggga
    29461 ggatattgta ggcccggtaa acgtggtgcc atcgggcaaa attagctcgg agtaacaggt
    29521 tttgattatt caaggaagcg atggtggtgg gggaaggatt actcagcgct gcgcgcttcg
    29581 cccttcgggt cgttgcctgc ggcaacgctc tctcgctggc gctcaagtcg aaccttggtc
    29641 gaagcttctc atccttcccc gcttgggcag aatatttaat tgcggattcg tttgagagtt
    29701 tacggacttt tgaaaagtga tggtggtggg ggaaggattc gaaccttcga agtcgatgac
    29761 ggcagattta cagtctgctc cctttggccg ctcgggaacc ccaccagggg taattcaaat
    29821 tttgaggtaa tgcttgagat ggtggtgggg gaaggattcg aaccttcgaa gtcgatgacg
    29881 gcagatttac agtctgctcc ctttggccgc tcgggaaccc caccacgggg taatgctttt
    29941 tactggcctg ctcccttatc gggaagcggg gcgcatcata tcaaatgacg cgccgctgta
    30001 aagtgttacg ttgagaaaaa tgaactggtt gcgtaatttt catccgtaac ggattaaagg
    30061 taaccagtta tttttgctgg cgattaaaga ataatcgtcc gattaccgta aacaaagacg
    30121 cgctgtgcca gtactttgta tagcgcacga cttaaaacgt ttttctcgac gtcacgacct
    30181 gcgcgcatca tatcttcagc tgtgtaggta tgatcgacat gaataacgtc ctgcatgatg
    30241 attgggcctt cgtccagatt gtcattcaca tagtgagcgg ttgcgccaat aatcttcaca
    30301 ccacgttcat aggcctggtg ataaggacgt gcgccgataa acgcaggcag gaatgaatgg
    30361 tgaatattga tgattttatt cgggaagcgt gccacaaatt ccggcgttaa tacccgcata
    30421 tacttcgcca gcaccacata gtcaggttta taagcatcaa tggcgtctgc catcttttga
    30481 tcgtgctcgt tgcggcttaa cccttcatgg tttaccagct caaacggaat atcaaaacgc
    30541 tcaaccagag aacgtaaagt atcgtggtta ccaataactg ccgcgatttc gacatccagg
    30601 ccgccgtaat tggctttcat caacaaatcg ccaaggcaat gcgcttcttt agtgaccaga
    30661 atcactatcc ggcgacgacc ggcaggattc agctcacgca cggagccttc tggcaatgcg
    30721 ctatcgagat ccgccagcag ggtggaatca ttaaaaatcc cttccagttc cgtgcgcata
    30781 aaaaagcgcc cggtacggtg atcaacaaat tcattgttct gtacgatatt taactcgtgc
    30841 ttgtagcaaa tattggtaat acgtgcgatc agaccttttt ggtccggaca aatagtacgc
    30901 agaactttac gttggagtga atgcattgct ggaaaaacct tgttgagagt gtttgctaaa
    30961 ccgtaccgtc aaccattatt ggccgcagca ctttttaaat tttttacctg aaccacaagg
    31021 gcagggatcg ttgcgaccaa actgcggacg tgtaccgtca atatagtacc attgaccgtt
    31081 ttctttcaaa aatcgcgaac gttcaattat tgcacctgtt ttgccacctt cggtaaatcg
    31141 agcaacaaaa ctgacaaatc cgatattgtc ggcgtcctgc caacaatgtt caaatacggt
    31201 caatcccaac cattcagtat gcgcaaatcc ggccatcaat tcggcacgta acgccgctgc
    31261 tccacaagag ggatgccagg tctttattaa ataatctgcg tcttgcatca caaaagcgca
    31321 gtaacgcgaa cgcatgagat gttctggatc aggtgcaacc ttttcaccag acacataagg
    31381 gtggcaacat aggctatact cgacagcact accacaggga caaagctgag acacaaataa
    31441 tctccctgga aacaataacg gcgtattaac cgcctgagta gcactatgtt aaccgagcag
    31501 tagcgatgtg gctacgattg cattccaggg gaatcttgcg ggaataatga gaaagataaa
    31561 aatagggctg gcgctgggat ctggcgcggc gagaggttgg tcgcatattg gcgttattaa
    31621 tgcgctaaaa aaagtgggta ttgaaattga tatcgttgca ggatgttcaa ttggttcgct
    31681 ggtgggcgct gcctatgcat gcgatcgatt atctgcgctg gaagattggg tgacctcttt
    31741 cagttattgg gatgttttac gcctgatgga tctctcctgg cagcgcggtg ggttactgcg
    31801 cggcgagcgt gtcttcaatc aatgccgcga aataatgccg gaaacagaga tcgaaaattg
    31861 ttcccgtcgc tttgcggctg ttgccaccaa tttaagtacg ggacgtgaat tatggtttac
    31921 tgaaggcgat ctccatcttg ctattcgcgc atcatgcagt attccaggac tcatggcacc
    31981 tgttgcacat aacggctact ggctggttga tggagcagta gttaacccaa ttcctatttc
    32041 cctcacgcgt gcattggggg ctgatattgt gatagcggtc gacctgcagc acgatgctca
    32101 tttgatgcaa caagatttgc tctcctttaa tgtcagtgaa gaaaatagcg agaatggtga
    32161 atctttgccg tggcatgcgc gtctgaaaga aaggttaggc agtataacaa cacgtcgggc
    32221 ggtgacagcg ccaacggcaa cagagattat gaccacttct atccaggtgc tggagaaccg
    32281 ccttaaaagg aaccgcatgg caggtgatcc gcccgatatt ctgattcaac ctgtttgccc
    32341 gcaaatatct acgcttgatt tccatcgcgc gcacgctgcc attgcggccg gacagctggc
    32401 agtggaaagg aaaatggacg aacttttgcc gttggtacgc accaacattt gaccagaatt
    32461 tttatctaca cttaagttaa ttctgacagg cgcaggtggc aatagcatgc cactattgag
    32521 taaagccagt caggggagag aacatgacgc agccattggt cggaaaacag attctcattg
    32581 ttgaagatga gcaggtattt cgctcgcttc tggattcatg gttttcctca ttgggagcga
    32641 caacggtact ggcggctgat ggggtggatg cccttgagtt gctgggaggt ttcactccag
    32701 acctgatgat atgtgatatc gcgatgccac gaatgaacgg gcttaaactg ctggagcata
    32761 tacgtaacag aggcgaccag accccagttc tggtgatatc tgccactgaa aatatggcag
    32821 atattgccaa agcgttacgt ctgggcgttg aagatgtttt gctgaaacca gttaaagatc
    32881 tgaatcgctt gcgcgagatg gtttttgcct gtctctatcc cagcatgttt aattcgcgcg
    32941 ttgaggaaga ggaaaggctt tttcgcgatt gggatgcaac ggttgataac cctgccgcag
    33001 cggcgaaatt attacaggaa ctacaaccgc cggttcagca ggtgatttcc cattgccggg
    33061 ttaattatcg tcaattggtt gccgcggaca aacccggcct ggtgcttgat attgccgcac
    33121 tttcggaaaa cgatctggca ttttattgcc ttgatgtcac ccgagctgga cataatggcg
    33181 tacttgctgc cttgttatta cgcgcattgt ttaacggatt attacaggaa cagcttgcac
    33241 accaaaatca acggttgcca gagctgggcg cgttattgaa gcaggtaaac catttactcc
    33301 gtcaggccaa tctgccgggg cagtttccgc tattagttgg ctattatcat cgcgaactga
    33361 aaaatctcat tctggtttct gcgggtctga atgcgacgtt aaataccggc gaacaccagg
    33421 tgcaaatcag taatggtgtt ccgttaggca ctttaggtaa cgcttatttg aatcaattga
    33481 gccagcgatg cgatgcctgg caatgccaaa tatggggaac cggtggtcga ctgcgcttga
    33541 tgttgtctgc agaatgagca aacgataacg cggactaaat ttgcattacc tgctaatgtc
    33601 ggctggtggt actatcgtcg ccattcgtat aagtaattgt cttaattatg ctaactcgcc
    33661 tccttttcag aacttagccc cttcggggtg ctgatatact gggatgcgat acagaaatat
    33721 gaacacgttc aaaacacgaa cagtccagga gaatttaaat ggctgccatt aatacgaaag
    33781 tcaaaaaagc cgttatcccc gttgcgggat taggaaccag gatgttgccg gcgacgaaag
    33841 ccatcccgaa agagatgctg ccacttgtcg ataagccatt aattcaatac gtcgtgaatg
    33901 aatgtattgc ggctggcatt actgaaattg tgctggttac gcactcatct aaaaactcga
    33961 ttgaaaacca ctttgatacc agttttgaac tggaagcaat gctggaaaaa cgtgtaaaac
    34021 gtcaactgct tgatgaagtg cagtctattt gtccgccgca cgtgactatt atgcaagttc
    34081 gtcaggggct ggcgaaaggc ctgggacacg cggtattgtg tgctcacccg gtagtgggtg
    34141 atgaaccggt agctgttatt ttgcctgatg ttattctgga tgaatatgaa tccgatttgt
    34201 cacaggataa cctggcagag atgatccgcc gctttgatga aacgggtcat agccagatca
    34261 tggttgaaca ggttgctgat gtgaccgcat atggcgttgt ggattgcaaa ggcgttgaat
    34321 tagcgccggg tgaaagtgta ccgatggttg gtgtggtaga aaaaccgaaa gcggatgttg
    34381 cgccgtctaa tctcgctatt gtgggtcgtt acgtacttag cgcggatatt tggccgttgc
    34441 tggcaaaaac ccctccggga gctggtgatg aaattcagct caccgacgca attgatatgc
    34501 tgatcgaaaa agaaacggtg gaagcctatc atatgaaagg gaagagccat gactgcggta
    34561 ataaattagg ttacatgcag gccttcgttg aatacggtat tcgtcataac acccttggca
    34621 cggaatttaa agcctggctt gaagaagaga tgggcattaa gaagtaacat ccatatcggt
    34681 gttatccacg aaacggcgtt gaacaatcga cgccgttttt ttatagctta ttcttattaa
    34741 attgtcttaa accggacaat aaaaaatccc gccgatggcg ggatttttag caattgcaat
    34801 ctacaaaaga ttattgcttg atcaggaaat cgtcgaggga tttaccttgc tcatccattg
    34861 cttttttgat tacagctgga gtacggccct ggccagtcca ggttttagtt tcgccgtttt
    34921 cgtcaacata gctatatttt gccggacgct gagcacgtct agctttggtg ccggatttaa
    34981 cggcagcaag gctattcagc agttcgttcg ggtcaatacc gtcagcgatc agcatttcgc
    35041 gatattgctg cagtttacga gtgcgctctt caacttcagc agcagccgcg ctttcttctt
    35101 cgcgacgttc gttaacaaca acttctaatt tttccagcat ttcttccagc gtttcaagtg
    35161 tacattctct tgcctgcgca cgaagagtac ggatgttgtt cagaatttta agtgcttcgc
    35221 tcattgtagt aatctcaaac ttatattggg gtggtttgtt gaggtaataa tagagcctta
    35281 aattcagttg tgcaatagcc aggaatgtaa ggaattcaaa attgttcttt attttgtgcc
    35341 gccaataaat atcttttcat aaaattagcc agaaaagacg cggcatatag ccctatttac
    35401 accgatgatt tcgcagcacg tgaggttaaa acttcctgat tcatgtcaca ttttatgggg
    35461 agattatcgt aggctgacgg cctttcagtc ttctgtatta gttgtgttta cgagaattcc
    35521 ctattaagcg aatgatgaaa agtagaacag tcgcaataag agcatggact tagtattgca
    35581 ctatctcctg gaggtcaaca gagggctatt acttgcgcaa caggttaaag attgtgaata
    35641 gttaccagca gtcatttacc cgcttataac aagcgaggca gttgtaatga tagctcagaa
    35701 ggattatgca aggcttcgta agggagaacg catataccca cttctgtgca tactgttgag
    35761 ctgaaaaact gacgaattat gataaactcc agccaacttt atttcatatc attgagggcc
    35821 tgtggctgat ggcacagcta tatttctact attccgcaat gaatgcgggt aagtctacag
    35881 cattgttgca atcttcatac aattaccaag aacgcggcat gcgcactgtc gtatatacgg
    35941 cagaaattga tgatcgcttt ggtgccggga aagtcagttc gcgtataggt ttgtcatcgc
    36001 ctgcaaaatt atttaaccaa aattcatcat tatttgatga gattcgtgcg gaacatgaac
    36061 agcaggcaat tcattgcgta ctggttgatg aatgccagtt tttaaccaga caacaagtat
    36121 atgaattatc ggaggttgtc gatcaactcg atatacccgt actttgttat ggtttacgta
    36181 ccgattttcg aggtgaatta tttattggca gccaatactt actggcatgg tccgacaaac
    36241 tggttgaatt aaaaaccatc tgtttttgtg gccgtaaagc aagcatggtg ctgcgtcttg
    36301 atcaagcagg cagaccttat aacgaaggtg agcaggtggt aattggtggt aatgaacgat
    36361 acgtttctgt atgccgtaaa cactataaag aggcgttaca agtcggctca ttaacggcta
    36421 ttcaggaaag gcatcgccac gattaataag aatttcttta ctgacagggt gagcagggca
    36481 cttttatcct gtcagttcgt tttacgcact tcttccgggc tatataccct tctcggcagt
    36541 tttttaacgc cgctatacgc ctcacagggc tcttaagcac cgacgttgac ttgtgacctg
    36601 taaagtacaa tatccctgtg tttaggcgtt atacatcgtc gcaaatatga tgaaggctaa
    36661 tgctgtcggt ttatggaaaa gttgctttgg gtaaacaaaa aatacggccc cagaagggca
    36721 atgccgttca cttaagagga gcggcactat gtttcacagg ataacgggtt tttgatatct
    36781 taaccgacct cggccttgat ggtcgggggc gttttgttat gaacaccact tccagagcac
    36841 cccgaagatg ctccagtcgt ttcgggatgg tccctggtga cgccgtgttt cccagctcta
    36901 tcatttctga tgcgatattc ttccacgcag gcagtagcca gtggcggtta caacccttct
    36961 ggttcagcgt tagcagcagg tcttcgctgt aaaaaagctt atcaaacaac gtaatagagt
    37021 tatccgggat ggtggcgagc atggagtggg ccagcacagt ttcgctctgc cggtaaggtg
    37081 cggtcacggc attcagcaga atgtgacttc ccaggttcat taaggccacc agacgcataa
    37141 ccgggtaggc gttctgccgc ttagtggatg tgttggcaga cccataatat tcacgcagct
    37201 cgggtttatc aggtgtcctg aactgtgcgc catcaatggc aaaaagttgc aggccgtgcc
    37261 agtcatcctt caggtaacgt tccgcgcccc tgtctgtgcg gtctggcgga agagccattc
    37321 cactggggcg gcccccacgc gctgacgcgc ttgggtgaca gcgctgcggg ccagcaggtt
    37381 catccccgct tcgccatccg cgctcaggtt cagacggcga acaacatcgg taattggctc
    37441 attgcaccac catccagata accatgtccc ccggtaaacg acggcggcga acggtcgcat
    37501 gagcagaaag cgtcaggcag tgttgtatcc actcggtggg aaggtgttct gcaaatagtt
    37561 gtgcagaggg cggaggcata agcggatggt cactgaaatc gagcagatca ttgagaagtg
    37621 gcataagaaa acggctccct gttgtggaag ccgttatagt gcctcagttt aaggatcggt
    37681 caactaatcc ttaactgatc ggcattgccc agaaggggcc gtttatgttg ccagacagcg
    37741 ctactgatta agcggatttt ttcgcttttt tctcagcttt agccggagca gcttctttct
    37801 tcgctgcagt ttcaccttct acataatcac gaccgtagta ggtatccagc agaatctgtt
    37861 tcagctcgga gatcagcggg taacgcgggt tagcgccggt gcactggtca tcgaatgcat
    37921 cttcagacag tttatccacg ttcgccagga agtctgcttc ctgaacgcca gcttcacgga
    37981 tagatttcgg aatacccagt tcagctttca gcgtttccag ccatgccagc agtttctcga
    38041 tcttagcagc agtacggtcg cccggtgcgc tcagacccag gtggtcagca atttcagcat
    38101 aacgacggcg agcctgcgga cggtcatact ggctgaatgc agtctgcttg gtcgggttgt
    38161 cgttcgcgtt gtagcgaata acgttacaaa tcagcagggc gtttgccaga ccgtgcggaa
    38221 tatggaactg ggaacccagt ttgtgcgcca ttgagtgaca tacacccagg aaggcgttcg
    38281 caaacgcgat acccgcgata gtcgctgcac tgtgaacacg ttcacgcgct accggatttt
    38341 tagacccttc gtggtaggac gctggcagat attctttcag cagtttcagt gcctgcagag
    38401 cctgaccatc agagaactca gatgccagta cagaaacata agcttccatg gcgtgagtta
    38461 ctgcgtccag accaccgaaa gcacacaggg acttcggcat gtccataacc aggttggcgt
    38521 cgacaatcgc catatccgga gtcagcgcat agtctgccag cggatatttc tgaccagtag
    38581 cgtcgtcagt tacaaccgca aacggagtga cttcagaacc tgtaccagaa gtggtggtga
    38641 cagcgatcat tttcgctttc acgcccattt tcgggaactt gtagatacgt ttacggatat
    38701 ccataaagcg cagcgccagc tcttcgaagt gagtttccgg atgttcgtac ataacccaca
    38761 tgatcttcgc ggcgtccatc ggggaaccac cacccagcgc gataatcacg tctggtttga
    38821 aggagtttgc cagttctgca cctttacgaa cgatgctcag ggtcgggtcc gcttctactt
    38881 cgaagaagac ttcagtttca acgcctgctg ctttcagtac ggaagtgatc tgatcagcat
    38941 aaccattgtt gaacaggaag cggtcagtca cgatgagcgc acgtttgtgg ccatcagtaa
    39001 tcacttcatc cagcgcgatt ggcagggagc cacggcggaa gtagatagat ttcggaagtt
    39061 tgtgccacaa catgttttca gctcgcttag caacggtttt cttgttgatc aggtgtttcg
    39121 gaccaacgtt ttcagagatg gagttaccac cccaagaacc acaacccaga gtcagggaag
    39181 gtgcgagttt gaagttatac aggtcaccga taccaccctg agacgctggg gtgttaatca
    39241 ggatacgagc cgttttcatt ttctgaccga agtaagaaac gcgagccggt tggttatcct
    39301 ggtcagtgta caggcaagag gtatgaccga taccgcccat agcaaccagt ttctctgctt
    39361 tttctaccgc gtcttcgaaa tctttagcgc ggtacattgc cagagtcggg gacagttttt
    39421 catgtgcgaa cggttcgctt tcatcaacaa cggtcacttc accgatcaga atcttggtgt
    39481 tttctggtac agagaagcct gccagttcag caattttata ggctggctga ccaacgatag
    39541 ccgcgttcag cgcaccgttt ttcaggataa catcctgaac agctttcagc tctttaccct
    39601 gcaacagata gccgccgtgg gttgcaaaac gttcacgtac agcgtcataa acagagtcaa
    39661 caacaacaac agactgttca gaagcacaga ttacgccgtt gtcgaaggtt ttggacatca
    39721 gtacagatgc aactgcacgt ttgatatcag cagtttcatc gataacaact ggagtgttgc
    39781 ccgcgcctac accgatagct ggtttaccgg agctgtatgc ggctttaacc atgcccggac
    39841 caccagtcgc gaggatcagg ttgatgtctg ggtggtgcat cagtgcgtta gacagttcaa
    39901 cagaaggttg atcgatccag ccgatcagat ctttcggagc accggcagcg atagcagcct
    39961 gcagaacgat atcagccgct ttgttggtgg catcttttgc acgcgggtgc ggggagaaga
    40021 taatggcgtt acgggtcttc agactgatca gcgatttgaa gatagcagtt gaagtcgggt
    40081 tagtggtcgg aacgataccg caaataatac cgattggttc agcgatagtg atggtaccaa
    40141 aagtgtcgtc ttcagacaga ataccacagg ttttttcatc tttataggcg ttgtagatat
    40201 attcagaagc aaagtggttt ttgatcactt tatcttcgac gatacccatg ccggattcgg
    40261 caacggccat tttcgcgagt gggattcgag catctgcagc agccagagcg gcggcgcgga
    40321 agattttgtc tacttgctct tgagtgaaac tggcatattc acgctgggct ttctttacac
    40381 gctctacgag tgcgttaagt tcagcgacat tagtaacagc cataatgctc tcctgataat
    40441 gttaaacttt tttagtaaat catctgctcg aatacgagag tatagtcagt gcggtgatga
    40501 tttgcttaac ctatgaaaat caaaagctta ctcgcgctca cactcactgt gatttactaa
    40561 aagagtttaa acattagagt tattatctct aatgcgtcac ttccaggtgg cgtaagcaag
    40621 attactcact tctgggtact gattacgtga tccaaatcaa attttttgca aagctgacac
    40681 ctttcagcat cgcttttcgc cattatagct aacagttaat aaattgtagt atgatttggt
    40741 ggctacatta gcatgttttg cacaactaga taacaataac gaatgatagc aattttaagt
    40801 agttaggagg tgaaaaatgc tgtcaaaagg cgtattgtca gcgcgtcttt tcaaccttat
    40861 ttatggctaa cattatccgg cttttgcttc ggagctaacc gtgattcaga ccttttttga
    40921 ttttcccgtt tacttcaaat ttttcatcgg gttatttgcg ctggtcaacc cggtagggat
    40981 tattcccgtc tttatcagca tgaccagtta tcagacagcg gcagcgcgaa acaaaactaa
    41041 ccttacagcc aacctgtctg tggccattat cttgtggatc tcgctttttc tcggcgacac
    41101 gattctgcaa ctttttggta tatcaattga ttcgttccgt atcgccgggg gcatcctggt
    41161 ggtgacgata gcgatgtcga tgatcagcgg caagcttggc gaggataaac agaacaagca
    41221 agaaaaatca gaaaccgcgg tacgtgaaag cattggtgtg gtgccattgg cgttgccgtt
    41281 gatggcgggg ccaggggcga tcagttctac catcgtctgg ggtacgcgtt atcacagcat
    41341 tagctatctg tttggtttct ttgtggctat tgcattgttc gctttatgtt gctggggatt
    41401 gttccgcatg gcaccttggc tggtacgggt tttacgccag accggcatca acgtgattac
    41461 gcgtattatg gggctattgc tgatggcatt ggggattgaa tttatcgtta ctggtattaa
    41521 ggggattttc cccggcctgc ttaattaatt cctttcaaat gaaacggagc tgccatgctc
    41581 cgtttacttc gtcattattt ttactttgtt cccgc
//
LOCUS       DAJVUK010000013        40979 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.013, whole genome shotgun sequence.
ACCESSION   DAJVUK010000013 DAJVUK010000000
VERSION     DAJVUK010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40979
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.013"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..332)
                     /locus_tag="OQQ57_000717"
     CDS             complement(<1..332)
                     /locus_tag="OQQ57_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HCS1955581.1"
                     /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSS
                     WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV
                     AQTAMCCG"
     gene            complement(413..1840)
                     /locus_tag="OQQ57_000718"
     CDS             complement(413..1840)
                     /locus_tag="OQQ57_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HCS1955582.1"
                     /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETEPQGFKQLRQ
                     AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
                     CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAI
                     AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
                     HRNLLRWYSAGRLDIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCD
                     YWREYPSTQADALILQWCRQHRVDYYPLVVMMIEARELVNDQGKQLLYVPGDSARTRF
                     HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHLLWPLYLVAKQLVQASQPT
                     EESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGC
                     LGVIKIIFYIFIFAGLIGKILHLFG"
     gene            complement(1837..2544)
                     /locus_tag="OQQ57_000719"
                     /pseudo
     CDS             complement(1837..2544)
                     /locus_tag="OQQ57_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706565.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
     gene            2707..3684
                     /locus_tag="OQQ57_000720"
     CDS             2707..3684
                     /locus_tag="OQQ57_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HCS1955583.1"
                     /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP
                     DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASN
                     ALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
                     QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGE
                     GVDQDYKQAMYWYLKAAAQESVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA
                     TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL"
     gene            complement(3754..4236)
                     /locus_tag="OQQ57_000721"
     CDS             complement(3754..4236)
                     /locus_tag="OQQ57_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HCS1955584.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            4471..7053
                     /gene="leuS"
                     /locus_tag="OQQ57_000722"
     CDS             4471..7053
                     /gene="leuS"
                     /locus_tag="OQQ57_000722"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HCS1955585.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKS
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            7068..7649
                     /gene="lptE"
                     /locus_tag="OQQ57_000723"
     CDS             7068..7649
                     /gene="lptE"
                     /locus_tag="OQQ57_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HCS1955586.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN"
     gene            7649..8680
                     /gene="holA"
                     /locus_tag="OQQ57_000724"
     CDS             7649..8680
                     /gene="holA"
                     /locus_tag="OQQ57_000724"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HCS1955587.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRTLHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            8682..9323
                     /gene="nadD"
                     /locus_tag="OQQ57_000725"
     CDS             8682..9323
                     /gene="nadD"
                     /locus_tag="OQQ57_000725"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HCS1955588.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIANKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNQED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            9347..9957
                     /locus_tag="OQQ57_000726"
                     /pseudo
     CDS             9347..9957
                     /locus_tag="OQQ57_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415171.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
     gene            10217..10534
                     /gene="rsfS"
                     /locus_tag="OQQ57_000727"
                     /gene_synonym="rsfA"
     CDS             10217..10534
                     /gene="rsfS"
                     /locus_tag="OQQ57_000727"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007373852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HCS1955589.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            10538..11005
                     /gene="rlmH"
                     /locus_tag="OQQ57_000728"
     CDS             10538..11005
                     /gene="rlmH"
                     /locus_tag="OQQ57_000728"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HCS1955590.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            11036..12937
                     /gene="mrdA"
                     /locus_tag="OQQ57_000729"
     CDS             11036..12937
                     /gene="mrdA"
                     /locus_tag="OQQ57_000729"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HCS1955591.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTTHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            12940..14052
                     /gene="mrdB"
                     /locus_tag="OQQ57_000730"
                     /gene_synonym="rodA"
     CDS             12940..14052
                     /gene="mrdB"
                     /locus_tag="OQQ57_000730"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HCS1955592.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            14063..15151
                     /gene="rlpA"
                     /locus_tag="OQQ57_000731"
     CDS             14063..15151
                     /gene="rlpA"
                     /locus_tag="OQQ57_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HCS1955593.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            15291..16502
                     /gene="dacA"
                     /locus_tag="OQQ57_000732"
     CDS             15291..16502
                     /gene="dacA"
                     /locus_tag="OQQ57_000732"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HCS1955594.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDMYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            16613..16876
                     /locus_tag="OQQ57_000733"
     CDS             16613..16876
                     /locus_tag="OQQ57_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HCS1955595.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVEILYEELGKIDIVRMVL"
     gene            16977..17618
                     /gene="lipB"
                     /locus_tag="OQQ57_000734"
     CDS             16977..17618
                     /gene="lipB"
                     /locus_tag="OQQ57_000734"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HCS1955596.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA"
     gene            17877..18830
                     /locus_tag="OQQ57_000735"
     CDS             17877..18830
                     /locus_tag="OQQ57_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HCS1955597.1"
                     /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIALNLLTIFEAVYVHK
                     GIVNAAKVLNLPPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES
                     ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL
                     SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL
                     PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP
                     LEKLPFPSLNKEQIDFSIHYNKFSLRDPILHGVIDVIRNAF"
     gene            19039..20004
                     /gene="lipA"
                     /locus_tag="OQQ57_000736"
     CDS             19039..20004
                     /gene="lipA"
                     /locus_tag="OQQ57_000736"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HCS1955598.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVAIEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(20105..20308)
                     /gene="tatE"
                     /locus_tag="OQQ57_000737"
     CDS             complement(20105..20308)
                     /gene="tatE"
                     /locus_tag="OQQ57_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HCS1955599.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(20437..21225)
                     /locus_tag="OQQ57_000738"
     CDS             complement(20437..21225)
                     /locus_tag="OQQ57_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HCS1955600.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
                     LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
                     GVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            21318..21701
                     /gene="crcB"
                     /locus_tag="OQQ57_000739"
     CDS             21318..21701
                     /gene="crcB"
                     /locus_tag="OQQ57_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HCS1955601.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(21756..21965)
                     /gene="cspE"
                     /locus_tag="OQQ57_000740"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(21756..21965)
                     /gene="cspE"
                     /locus_tag="OQQ57_000740"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HCS1955602.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(22140..22700)
                     /gene="pagP"
                     /locus_tag="OQQ57_000741"
     CDS             complement(22140..22700)
                     /gene="pagP"
                     /locus_tag="OQQ57_000741"
                     /EC_number="2.3.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) palmitoyltransferase PagP"
                     /protein_id="HCS1955603.1"
                     /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAPTWQQ
                     PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS
                     WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
                     VTFQMTYIPGTYNNGNVYFAWMRFQF"
     gene            23289..24674
                     /gene="dcuC"
                     /locus_tag="OQQ57_000742"
     CDS             23289..24674
                     /gene="dcuC"
                     /locus_tag="OQQ57_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HCS1955604.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(24715..25395)
                     /gene="dpiA"
                     /locus_tag="OQQ57_000743"
                     /gene_synonym="citB"
     CDS             complement(24715..25395)
                     /gene="dpiA"
                     /locus_tag="OQQ57_000743"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HCS1955605.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTSARRYLEYCASRHLIIAEIVHGKVGR
                     PQRIYHSG"
     gene            complement(25364..27021)
                     /gene="dpiB"
                     /locus_tag="OQQ57_000744"
                     /pseudo
     CDS             complement(25364..27021)
                     /gene="dpiB"
                     /locus_tag="OQQ57_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
     gene            27370..28428
                     /gene="citC"
                     /locus_tag="OQQ57_000745"
     CDS             27370..28428
                     /gene="citC"
                     /locus_tag="OQQ57_000745"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HCS1955606.1"
                     /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR
                     DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE
                     ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG
                     HRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR
                     ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR
                     YWLKTPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ
                     NLLEHSRQDAAARQKTPA"
     gene            28443..28739
                     /gene="citD"
                     /locus_tag="OQQ57_000746"
     CDS             28443..28739
                     /gene="citD"
                     /locus_tag="OQQ57_000746"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HCS1955607.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLARYNVRGVQLNVDDKGTLDCILRARLEALLARASGIPTLPWEDCQ"
     gene            28736..29644
                     /gene="citE"
                     /locus_tag="OQQ57_000747"
     CDS             28736..29644
                     /gene="citE"
                     /locus_tag="OQQ57_000747"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HCS1955608.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            29655..31187
                     /gene="citF"
                     /locus_tag="OQQ57_000748"
     CDS             29655..31187
                     /gene="citF"
                     /locus_tag="OQQ57_000748"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HCS1955609.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIHRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD
                     CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI
                     DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
                     EQEQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
                     GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
                     QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG
                     ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
                     PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
                     KE"
     gene            31191..31741
                     /gene="citX"
                     /locus_tag="OQQ57_000749"
                     /pseudo
     CDS             31191..31741
                     /gene="citX"
                     /locus_tag="OQQ57_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
     gene            31716..32593
                     /gene="citG"
                     /locus_tag="OQQ57_000750"
                     /pseudo
     CDS             31716..32593
                     /gene="citG"
                     /locus_tag="OQQ57_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
     gene            32644..34107
                     /gene="citT"
                     /locus_tag="OQQ57_000751"
     CDS             32644..34107
                     /gene="citT"
                     /locus_tag="OQQ57_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
                     /protein_id="HCS1955610.1"
                     /translation="MSLAKDNIWKLLAPLVVMGVMFLIPVPNGMPPQAWHYFAVFVAM
                     IVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSST
                     TVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT
                     ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL
                     GLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDE
                     LKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITR
                     YNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAH
                     YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY
                     GCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN"
     gene            34218..35024
                     /gene="rna"
                     /locus_tag="OQQ57_000752"
     CDS             34218..35024
                     /gene="rna"
                     /locus_tag="OQQ57_000752"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HCS1955611.1"
                     /translation="MKEFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEAHASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSRGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPSNCGKTFVIDKVGY"
     gene            35254..35664
                     /gene="rnk"
                     /locus_tag="OQQ57_000753"
     CDS             35254..35664
                     /gene="rnk"
                     /locus_tag="OQQ57_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HCS1955612.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
     gene            complement(35895..37133)
                     /locus_tag="OQQ57_000754"
     CDS             complement(35895..37133)
                     /locus_tag="OQQ57_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HCS1955613.1"
                     /translation="MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHL
                     YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRMQQYA
                     ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
                     SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD
                     HHPYRLSFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET
                     VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
                     HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS
                     AEEAQKAVSGLVNAMPGGTI"
     gene            37354..37782
                     /gene="uspG"
                     /locus_tag="OQQ57_000755"
     CDS             37354..37782
                     /gene="uspG"
                     /locus_tag="OQQ57_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HCS1955614.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLTQDDGVIHLLHVLPGSA
                     SLSLDRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            complement(37903..39468)
                     /gene="ahpF"
                     /locus_tag="OQQ57_000756"
     CDS             complement(37903..39468)
                     /gene="ahpF"
                     /locus_tag="OQQ57_000756"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017455864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HCS1955615.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNLGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(39639..40202)
                     /gene="ahpC"
                     /locus_tag="OQQ57_000757"
     CDS             complement(39639..40202)
                     /gene="ahpC"
                     /locus_tag="OQQ57_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HCS1955616.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            40574..>40979
                     /gene="dsbG"
                     /locus_tag="OQQ57_000758"
     CDS             40574..>40979
                     /gene="dsbG"
                     /locus_tag="OQQ57_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HCS1955617.1"
                     /translation="MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGM
                     KGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRME
                     QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQ"
BASE COUNT        10182 a        10479 c        10069 g        10249 t
ORIGIN      
        1 tccccacagc acatagcggt ttgggcaacg aattgggtat aaatcaaccc tctctccgag
       61 ccaccagcaa ttaatgcttt ccactcttca ggggaagagc gatgccatgt cagatataag
      121 ccagctaaat cattggcatg accatcatca gtcatctgat aaatagtctg aattaaatca
      181 tcacgattat ttattcccca ggatgatgag agatcgaatt cttttatacc ggtatacatt
      241 tttggcgagt catgcgcggg tttgcaaccc tgattaagta tttccatggg cgcagaaagc
      301 gcaaaaagaa gatattgttc ttccttattc atttgttaat aatcccttaa gtgcattaac
      361 tgactacttt tttatattac ttgccgggct ttccgcacat taacgtcgac tgtcacccga
      421 acagatggag tattttccct atcaaaccgg caaagataaa aatgtagaaa ataattttga
      481 tgacgcccag acagcccggc ccaccatcgt caacgggcat tggctgcggt tgcggctccg
      541 gttcaacagt ttgcttctcg gtaaaattcg ccgcctgaat taataatcga cgaataatta
      601 atgcttccag tggacaacga tcttctgcat caagacggct tacgatcggc attaatgatt
      661 cttctgtcgg ttggctggcc tgcactaatt gtttggcaac taaatataat ggccataaga
      721 gatgttctgt atcacgcgtg agtgagatcc gcggcttacg tcctttgtgc aaaaccatct
      781 cgaccagtga acgccccagc gcagagagtt tttcatcgct gagtatttcg tataaatgaa
      841 aacgcgtacg ggcgctgtcg ccggggacat aaagtagctg tttaccctga tcgttaacca
      901 gttcacgagc ttcaatcatc atcaccacta acgggtaata atcgacccga tgctgacggc
      961 accattgcaa tattaaagca tccgcctggg tggagggata ctcgcgccag tagtcacaaa
     1021 gttctgccag caagctttcg ccttctccac aatagacgcg ttgcgcgtat tcataataac
     1081 gcgcatcttc attatcaggt tcagcttccc gccacgaccg ggcgtaatcc agaagttcgg
     1141 ggatatccag gcgacctgcg ctataccagc ggagtaaatt tctgtgcagt tttgcatcat
     1201 cggggatgat cactgcgcga tgttgcgcta aatacaatgt cagccattct ggatgcgatg
     1261 accaaatccg agcgaacatt tggtaaaaat cgatggtgtc attttgcacg gcaacgggca
     1321 gatgcagaat ggtctggaag ttaaaaacat tccccttcgc aatggcatat aaaaaggatt
     1381 ccagttcttc ttcgtctatt tccccgacgt tttcctcctg caaccaccgc aatctttctg
     1441 ctaataacac cacgcactcg aaggataaat gggcagtgtt catggcgatt gtgcacagcg
     1501 accagcgtaa ttcatcaatc tcttccatcg agcaataatt taattgctga atgaatcgct
     1561 gccaggcgga gggcagaaaa cgttcgctat cagaggcaag taacgcgcga aaggcgagca
     1621 gaatttcatg ttctgctacc tcatattctt ctggttgcca aacagattta gcaggcgact
     1681 gcgcaatccg tagcgcctcc tcatacgcct gacgaagttg tttaaaaccc tgcggttcgg
     1741 tttctggatg aaaggacggt aacagcgcca gataagcgcg gcggataata tcgacgtcag
     1801 tcgtttcctc tatatcgagg atcttccagc aatttttcat aagtcgctca tatccttaag
     1861 cgtttccggg catgtggggt agtcagccag tggttgccag gacaaggtag ggtaatacgc
     1921 atcatcactg gcaaataatt gataaaacat atcattgccg gaatcgtcgt attctttacg
     1981 cgctaagaat tcgcgtaata aaggcagatg atcatcttcg ggagactgcc aatattgccg
     2041 accaaaggta taaccggcaa agtattgccg ccagttacta taataacgta gagcccgtag
     2101 atgaatacgc gactggatcc atagactttc ttcttcactc aaccagttat taagtacgcc
     2161 cattcgactt aaaaaaccca tccggacata atcccatgct ttaattcctc cctcaccaca
     2221 gcattcggct gtgctggcga caaattgcgc ataagcctga ccttgctcat ttaattcagc
     2281 aagatagtca cgccattcac atggagaata acgaaaccag cggtgataaa accctgccaa
     2341 ccgagcggca tgaccgttct cgatcattcg gtgaattgtg cgcagcaggt catcacggtc
     2401 atcaattccc cattaggaag aaaggtcaaa aaagcatgta cctaaataca ttttggggga
     2461 tgaatgcgaa ggtaaacagc attcattgcg tatttccatc ggagtggaaa gtgcaaacaa
     2521 tattttttgc gaccccatgt ccatataatt tatccttaaa cattcattta atgaatgtaa
     2581 actacatttc gagactcagt tatttatact tttctgacgc gacataatac gcataaaata
     2641 aggcttacgc aaaaatggaa cacataaaat ataatatgtt ttatctacaa ccataaggaa
     2701 atgataatga tttttacgtc aagttgctgc gataatttat caatagatga gattatcgaa
     2761 cgtgctgaaa aaggcgattg cgaggctcaa tatattgttg ggttttatta taatcgcgat
     2821 agcgcaattg actctccgga cgacgaaaag gccttttact ggctgaagct ggccgccgag
     2881 caaggtcatt gtgaagcaca atattcctta ggacaaaagt atactgagga taaaagccgt
     2941 cataaagata atgagcatgc catcttttgg ctgaaaaaaa ctgccctaca aggccatact
     3001 ttcgcttcca acgcccttgg ctggatactg gatcgtggag aagaccccaa ttataaagaa
     3061 gcggttgtct ggtatcagat agccgcggag agcggaatgt cttatgcgca aaataatctt
     3121 gggtggatgt acagaaatgg caacggagtc gcaaaagact atgcgctggc atttttctgg
     3181 tacaaacaag ctgcattaca aggccatagt gacgcgcaaa acaatctggc cgatctttat
     3241 gaagacggaa aaggcgttgc tcaaaacaag acactcgccg cattctggta tttgaaaagc
     3301 gcacagcagg gtaatcggca cgcccagttt caaattgcat gggattataa cgctggcgaa
     3361 ggggtggacc aggactataa gcaagcgatg tactggtatc tgaaggctgc cgctcaggaa
     3421 agcgtcggcg cttacgtcaa catcggttat atgtataaac acggacaagg cgttgagaaa
     3481 gattatcagg ctgcctttga atggtttacg aaagccgctg aatgcaatga cgccactgcc
     3541 tggtataacc tggccattat gtatcactac ggagaaggaa gacctgtcga tctccgacag
     3601 gctctcgacc tgtatcgtaa agttcagtca tccggaacca gagatgtcag tcaggaaatt
     3661 cgtgagactg aagatttact gtagagataa aaacaagggc cggggaattt cattcggccc
     3721 atattctctt tattgctgtg cgaaatcaga ctattacggc tcaaacgggc gtctctggaa
     3781 ctggtcatga ccacatttcg ggcatagcgt cagcacttcc ggtgtgtaga tcgggagatg
     3841 gaagtgacat ttctcgcaga ccagatttcc cagcccgacc acttctccgc tgtgataaac
     3901 cccatgatga ttgaggtcct ggaaaacttc gcgccattca agctgcgttt tatcggtgat
     3961 atctgccagc tcctgccata agctttcttt aatcacccgc ataaagacgc tgtcagattc
     4021 ttctttcagg ctctcttcat agctcatggc gaactcttcc aggtcacgtc ttacagctcg
     4081 cgtcagctca tcgacctcgg ttcgcgttaa ctcccctgtt tttattacgc gctcgcgcgc
     4141 ctgttccacc agtgcgtcga tatcacgttc gccattgcgc aggcgttcgc tcagtgacgc
     4201 gaccagttca cggtaatatt gagcaacctt gttcatcgtt tcatctcccg ggtcgttaac
     4261 tgactataat aatagacgtt ctttgttcct tgctttgcta atacgcccac aaactctgta
     4321 aattaatgta tgaataatcc gggcatcatt tcaacgtcga gtgcgcgaaa ggctgttttg
     4381 acgcggacgt ttgggctatg ctatgcggat ctgaaaaacc acctcaacgc tacatttgta
     4441 gccgtattga aaacaggacc actggctgcc atgcaagagc aataccgccc ggaagagata
     4501 gaatccaaag tacagcttca ttgggatgag aagcgcacat ttgaagtaac cgaagacgag
     4561 agcaaagaga agtattactg cctgtctatg cttccctatc cttctggtcg actacacatg
     4621 ggccacgtac gtaactacac catcggtgac gtgatcgccc gctaccagcg tatgctgggc
     4681 aaaaacgtcc tgcagccgat cggctgggac gcgtttggtc tgcctgcgga aggcgcggcg
     4741 gtgaaaaaca acaccgctcc ggcaccgtgg acgtacgaca acatcgcgta tatgaaaaac
     4801 cagctcaaaa tgctgggctt tggttatgac tggagccgcg agctggcaac ctgtacgccg
     4861 gaatactacc gttgggaaca gaaattcttc accgagctgt ataaaaaagg cctggtatat
     4921 aagaagactt ctgcggtcaa ctggtgcccg aacgaccaga ccgtactggc gaacgaacaa
     4981 gttatcgacg gctgctgctg gcgctgcgat accaaagttg aacgtaaaga gatcccgcag
     5041 tggtttatca aaatcactgc ttacgctgac gagctgctca acgatctgga taaactggat
     5101 cactggccag acaccgttaa aagcatgcag cgtaactgga tcggtcgttc cgaaggcgtg
     5161 gagatcacct tcaacgttaa cgactatgac aacacgctga ccgtttacac tacccgcccg
     5221 gacaccttta tgggttgtac ctacctggcg gtagctgcgg gtcatccgct ggcgcagaaa
     5281 gcggcggaaa ataatcctga actggcggcc tttattgacg aatgccgtaa caccaaagtt
     5341 gccgaagctg aaatggcgac gatggagaaa aaaggcgtcg atactggctt taaagctgtt
     5401 cacccattaa cgggcgaaga aattcccgtt tgggcagcaa acttcgtatt gatggagtac
     5461 ggcacgggcg cagttatggc ggttccgggt cacgaccagc gcgactacga gtttgcctct
     5521 aaatacggcc tgaacatcaa accagttatc ctggctgctg acggctctga gccagatctt
     5581 tctcagcaag ccctgactga aaaaggcgtg ctgttcaact ctggcgaatt caacggtctt
     5641 gaccatgaag cggccttcaa cgccatcgcc gataaactga ctgcgatggg cgttggcgag
     5701 cgtaaagtga actaccgcct gcgcgactgg ggtgtttctc gtcagcgtta ctggggcgcg
     5761 ccgattccga tggtgacgct ggaagacggt accgtaatgc cgaccccgga cgaccagctg
     5821 ccggtgatcc tgccggaaga tgtggtgatg gacggcatta ccagcccgat taaagcagat
     5881 ccggagtggg caaaaactac cgttaacggt atgccagcgc tgcgtgaaac cgacactttc
     5941 gacaccttta tggagtcctc ctggtactat gcgcgctaca cttgcccaga gtacaaagaa
     6001 ggtatgctgg attccgaagc ggctaactac tggctgccgg tggatatcta cattggtggt
     6061 atcgaacacg ccattatgca cctgctctac ttccgcttct tccacaaact gatgcgtgat
     6121 gcaggcatgg tgaactctga cgaaccagcg aaacagttgc tgtgtcaggg tatggtgctg
     6181 gcagatgcct tctactatgt tggcgaaaac ggcgaacgta actgggtttc cccggttgat
     6241 gctatcgttg aacgtgacga gaaaggccgt atcgtgaaag cgaaagatgc ggcaggccat
     6301 gaactggttt ataccggcat gagcaaaatg tccaagtcga agaacaacgg tatcgaccca
     6361 caggtgatgg ttgaacgtta cggcgcggac accgttcgtc tgtttatgat gtttgcttct
     6421 ccggctgata tgactctaga atggcaggaa tccggtgtgg aaggggctaa ccgcttcctg
     6481 aaacgtgtct ggaaactggt ttacgagcac acagcaaaag gtgatgttgc ggcactgaac
     6541 gttgatgcgc tgactgaaga tcagaaagcg ctgcgtcgcg atgtgcataa aacgatcgct
     6601 aaagtgaccg atgatatcgg ccgtcgtcag accttcaaca ccgcaattgc ggcgattatg
     6661 gagctgatga acaaactggc gaaagcacca accgatggcg agcaggatcg cgctctgatg
     6721 caggaagcgc tgctggccgt tgtccgtatg cttaacccgt tcaccccgca catctgcttc
     6781 acgctgtggc aggaactgaa aggcgaaggc gatatcgaca acgcgccgtg gccggttgct
     6841 gacgaaaaag cgatggtgga agactccacg ctggtcgtgg tgcaggttaa cggtaaagtc
     6901 cgtgccaaaa tcaccgttcc ggtggacgca acggaagaac aggttcgcga acgtgctggc
     6961 caagaacatc tggtagcaaa atatcttgat ggcgttaccg tgcgtaaagt gatttacgta
     7021 ccaggtaaac tcctcaatct ggtcgttggc taagcgcggg aggaagcgtg cgatatctgg
     7081 caacattgtt gttatctctg gcggtgttaa tcaccgccgg gtgtggctgg catctgcgtg
     7141 ataccacgca ggttccttcc actatgaagg tcatgatcct ggactcaggc gatccgaacg
     7201 ggccattaag ccgtgcggtg cgtaaccagt tacgtctgaa tggtgtcgag ttgcttgata
     7261 aagaaaccac gcgtaaggac gttccatccc tgcgtttggg taaagtgagc atcgcgaaag
     7321 ataccgcatc ggtattccgt aacggtcaaa cagcagagta tcagatgatc atgacggtga
     7381 atgcgaccgt gttgatcccc ggccgtgata tctacccgat tagcgccaaa gtcttccgtt
     7441 cgttctttga taacccgcaa atggcgttag cgaaagataa cgaacaagac atgatcgtaa
     7501 aagagatgta cgaccgtgct gccgaacagc tgattcgtaa gctgccaagc atccgtgctg
     7561 cggatattcg ttccgacgaa gaacagacgt cgaccacaac ggatactccg gcaacgcctg
     7621 cacgcgtctc caccacgctg ggtaactgat gattcggttg tacccggaac aactccgcgc
     7681 gcagctcaat gaagggctgc gcgcggcgta tcttttactt ggtaacgatc ctctgttatt
     7741 gcaggaaagc caggacgctg ttcgtcaggt agctgcggca caaggattcg aagaacacca
     7801 cactttttcc attgatccca acactgactg gaatgcgatc ttttcgttat gccaggctat
     7861 gagtctgttt gccagtcgac aaacgctatt gctgttgtta ccagaaaacg gaccgaatgc
     7921 ggcgatcaat gaacaacttc tcacactcac cggacttctg catgacgacc tgctgttgat
     7981 cgtccgcggt aataaattaa gcaaagcgca agaaaatgcc gcctggttta ctgcgcttgc
     8041 gaatcgcagc gtgcaggtga cctgtcagac accggagcag gctcagcttc cccgctgggt
     8101 tgctgcgcgc gcaaaacagc tcaacttaga actggatgac gcggcaaatc aggtgctctg
     8161 ctactgttat gaaggtaacc tgctggcgct ggctcaggca ctggagcgtt tatcgctgct
     8221 ctggccagac ggcaaattga cattaccgcg cgttgaacag gcggtgaatg atgccgcgca
     8281 tttcacccct tttcattggg ttgatgcttt gttgatggga aaaagtaagc gcacattgca
     8341 tattcttcag caactgcgtc tggaaggcag cgaaccggtt attttgttgc gcacattaca
     8401 acgtgaactg ttgttactgg ttaacctgaa acgccagtct gcccatacgc cactgcgtgc
     8461 gttgtttgat aagcatcggg tatggcagaa ccgccggggc atgatgggcg aggcgttaaa
     8521 tcgcttaagt cagacgcagt tacgtcaggc cgtgcaactc ctgacacgaa cggaactcac
     8581 cctcaaacaa gattacggtc agtcagtgtg ggcagagctg gaagggttat ctcttctgtt
     8641 gtgccataaa cccctggcgg acgtatttat cgacggttga tatgaaatct ttacaggctc
     8701 tgtttggcgg cacctttgat ccggtgcact atggtcatct aaaacccgtg gaaacgctgg
     8761 cgaatttgat tggtctgacg cgggtcacaa tcatccctaa taatgttcct ccgcatcgtc
     8821 cccagccgga agcgaacagc gtgcagcgta aacacatgct tgaactggcg attgccaaca
     8881 agccattatt tactcttgat gaacgcgagc taaagcgcaa tgccccctct tacactgcgc
     8941 aaacactgaa agagtggcgg caggaacaag gaccggacgt gccgctggcg tttattattg
     9001 gtcaggattc actgctgacc tttccgacct ggtacgaata cgaaacgata ctcgacaatg
     9061 cacatttgat cgtctgtcgg cgtccaggtt acccacttga aatggcgcaa ccgcaatacc
     9121 agcaatggct ggaagatcat ttgacacata accaggaaga tcttcacctt cagcctgccg
     9181 gtaaaattta tctggctgaa acgccgtggt ttaacatctc ggcgaccatc atccgcgaac
     9241 gtttgcaaaa cggtgaatcg tgtgaggatt tattgccgga accggtactg acttacatta
     9301 accaacaagg cttgtatcgc tgatacctgt cgttacggag ggcatgatgc gactgtggtt
     9361 aattcgtcat ggtgaaacgc aagcgaatat cgatggtctt tacagcggtc atgcgccccc
     9421 cccctgaccg cgcgcggtat tgagcaagcg caaaatctgc atacgctgct acatggtgtt
     9481 tcctttgatc tggttttatg cagtgaactg gaacgggcac agcataccgc gcgactggtt
     9541 ctcagtgacc gccagctccc cgtgcaaatc atccctgaac tcaacgaaat gttttttggc
     9601 gactgggaga tgcgacatca tcgcgacctc atgcaagaag atgccgaaaa ctatagcgcg
     9661 tggtgcaatg actggcagca tgcaatcccc acgaacggtg aaggatttca ggcattttcg
     9721 caacgtgtgg aacgctttat cgcaaggctt agtgaatttc agcactatca gaatatttta
     9781 gtcgtcagcc atcagggtgt actgagtctg ttaatcgccc gtttaattgg catgcctgcc
     9841 gaggctatgt ggcattttcg cgttgaccag gggtgttgga gcgccattga tatcaaccaa
     9901 aaattcgcga cgctacgcgt cctcaatagc cgtgccatcg gggtcgataa tgcatgactt
     9961 ttctgttttt ttacgggtaa gccgcaacga ccattgacag acccgggcag gctgatattc
    10021 tccgcagcca gacttttttc gccagacacg actttgtaga aattgtttta caaaaatggc
    10081 gatgcaatct gcggcgcggg gtgggatgat agcccacttt cgaaagccga ttcggcgaca
    10141 attgtcccga aatcgcctct ggttcaggta tactgacaga ccatttttat ctatttgatt
    10201 cacccagggg gaaaacttgc agggtaaagc actccaggat tttgttatcg acaaaattga
    10261 tgacctcaaa ggtcaggaca tcatcgcctt agacgttcaa ggcaaatcca gcatcaccga
    10321 ctgcatgatc atctgtacgg gtacgtccag ccgtcatgtt atgtccattg ctgaccacgt
    10381 tgtgcaggag tctcgcgcag cgggcctgtt accgctcggc gtagaaggtg aaaacagcgc
    10441 cgactggatt gtcgtggatt tgggcgatgt gattgtccat gtcatgcagg aagagagccg
    10501 tcgcctgtat gaactggaaa aactctggag ttaatgcgtg aagctgcaac ttgtcgccgt
    10561 gggaacgaaa atgccggact gggtacaaac cggttttacc gagtacctgc gtcgttttcc
    10621 gaaagatatg cccttcgagc tgattgaaat tccggccgga aaacgcggca agaatgcgga
    10681 catcaagcgc atactcgaca aagagggtga gcagatgttg gcggccgcag gcaaaaaccg
    10741 cattgtcacc ctcgatattc caggcaagcc ctgggatacg ccgcagttag ccgctgagct
    10801 ggaacgctgg aagctggatg gtcgcgacgt cagtctactg attggcgggc ctgaagggtt
    10861 gtcgcctgcc tgtaaagcgg cggcggagca gagctggtcg ctgtcggcgc ttaccctccc
    10921 ccatccgctg gttcgcgtgc tggtcgcaga gagtctgtac cgggcgtgga gcatcaccac
    10981 caaccatcct tatcaccgtg agtgataagg gagctttgag tagaaaacgc agcggatgaa
    11041 actacagaac tcttttcgcg actatacggc agagtccgcg ctgtttgtgc gccgggcgct
    11101 ggtcgccttt ttggggattt tgctgctgac cggcgtgctt atcgccaacc tgtataatct
    11161 gcaaattgtt cgctttaccg actaccagac ccgctctaat gaaaaccgca ttaagctggt
    11221 gcctatcgcg cccagccgcg gcattattta cgaccgtaat ggtatccctc tggccctcaa
    11281 ccgcactatc taccagatag aaatgatgcc agagaaagtc gataacgtgc agcaaacgct
    11341 ggacgctttg cgcagcgtgg ttgatctgac cgatgacgat attgctgcat tccgaaaaga
    11401 gcgcgcacgt tcacaccgtt tcacctctat tcccgtgaaa actaacctga ccgaagtaca
    11461 agtagctcgc tttgccgtca atcagtaccg ttttccgggg gttgaagtta aaggctataa
    11521 acgtcgttac tatccttacg gttcggcgtt gacccacgtc atcggctatg tgtcgaaaat
    11581 caacgataaa gacgtcgaac gcctgaataa tgacggcaaa ctggccaact atgcggcaac
    11641 gcatgatatc ggtaagctgg gcattgagcg ttactatgaa gacgtgctgc acggtcagac
    11701 cggttatgaa gaggttgaag ttaacaaccg tgggcgtgtt atccgccagt taaaagaagt
    11761 accaccgcaa gccggacacg atatttacct gacgctggat ctcaaactcc agcaatatat
    11821 tgaaacgctg ctggcgggta gccgcgcagc tgtggtagtc accgatccgc gtacaggtgg
    11881 ggtgctggcg ctggtttcca cgcctagtta tgacccaaac ttgtttgttg acggtatctc
    11941 cagcaaagat tattccgcct tgttgaacga cccgaataca ccgctggtga accgcgccac
    12001 acagggggtt tatcctcccg cgtctacagt taaaccctat gtggcggttt cggcattgag
    12061 cgccggggtg atcacgcgca atacgacgct gtttgaccca ggctggtggc aactgccagg
    12121 ttcggaaaaa cgttatcgtg actggaaaaa atggggccac gggcgtctga atgtcacaag
    12181 atcgctggaa gaatctgcgg ataccttctt ctatcaggtg gcctacgata tggggatcga
    12241 tcgcctctcc gaatggatgg gtaaattcgg ttatggtcat tacaccggta tcgacctggc
    12301 ggaagaacgt tccggcaaca tgcctacccg cgaatggaaa cagaaacgct ttaaaaaacc
    12361 gtggtatcag ggtgacacca ttccggttgg tatcggtcag ggttactgga cagcgacccc
    12421 aatccagatg agtaaggcac tgatgatcct gattaatgac ggtatcgtga aggttccgca
    12481 tttgctgatg agcaccgccg aagacggcaa acaggtgcca tgggtacaac cgcatgaacc
    12541 gcccgtcggc gatattcatt ccggttactg ggagctggcg aaagacggta tgtacggtgt
    12601 tgctaaccgc cctaacggta cgacgcataa atactttgcc agcgcaccgt acaaaattgc
    12661 ggcgaaatct ggtaccgctc aggtcttcgg tctgaaagcg aacgaaacct ataatgcgca
    12721 caaaattgcc gagcgtttac gtgaccacaa actgatgacc gcctttgcgc catacaacaa
    12781 tccgcaagtg gctgtcgcca tgattctgga gaacggcggc gcgggtccgg cggttggtac
    12841 gctgatgcgt cagatcctcg accacattat gctgggtgat aacaacaccg atctgcctgc
    12901 ggaaaatcca gcggttgccg cagcggagga ccattaatca tgacggataa tccgaataaa
    12961 aaaacattct gggataaagt ccatctcgat cccacaatgc tgctgatctt actggcattg
    13021 ctggtttaca gcgccctagt tatctggagc gccagcggtc aggatattgg catgatggag
    13081 cgtaaaatcg gccaaatcgc gatgggtctg gtcatcatgg tggtgatggc gcaaattcct
    13141 ccacgcgttt atgaaggctg ggccccctat ctctatatca tctgtattat tttgctggtg
    13201 gcggtagatg ctttcggtgc catctctaaa ggtgctcaac gctggctgga cctcggtatt
    13261 gttcgttttc agccgtcgga aattgccaaa atagccgtac cactgatggt tgcgcgcttt
    13321 atcaaccgcg acgtttgccc accgtcgttg aagaacacag gcatcgcgct ggtgctgata
    13381 tttatgccca cgctgctggt ggctgcacag cctgacctgg gaacatcaat cctcgttgcg
    13441 ctttccggtc tgtttgtact gttcctctct ggccttagct ggcgtctgat tggcgtcgca
    13501 gtagtgctgg tggcggcgtt cattcctatt ctgtggttct tcctgatgca tgattaccag
    13561 cgccagcgcg taatgatgct cctagacccg gaatcagacc cactcggcgc gggctatcac
    13621 attattcagt ctaaaattgc tattggctcc ggcggattac gcggcaaagg ctggctgcat
    13681 ggcactcagt cacaacttga atttctaccc gaacgccata ccgactttat cttcgcggta
    13741 ctggcggaag agctgggatt agtgggcatt ttgattctgc tcgctctcta cattctgctg
    13801 atcatgcgcg ggctgtggat agccgccaga gcgcaaacca cctttggtcg cgtcatggct
    13861 ggcggcttaa tgctgatatt attcgtttat gtcttcgtaa atattggtat ggtaagcggt
    13921 attctgccgg ttgtaggggt tccgctccca ctggtcagtt atggaggatc agcgctaatt
    13981 gtgctgatgg ctgggttcgg gattgtaatg tcaatccaca cccacaggaa aatgttgtcg
    14041 aaaagcgtgt aagaggtgcg caatgcgtaa gcagtggctc gggatctgca tcgcggcagg
    14101 aatgctcgcg gcatgtacaa gcgatgatgg tcagcaacag acggtaagtg taccgcagcc
    14161 tgcggtatgt aacggcccca tagttgaaat tagcggggcg gacccgcgtt tcgaaccact
    14221 gaacgcgacg gcaaatcagg attaccagcg cgacggtaaa agctacaaaa tcgtgcagga
    14281 tccgtctcga tttagccagg cgggactggc ggcaatctat gatgccgaac caggcagtaa
    14341 cctgacggcc tctggcgaag ctttcgatcc gacacagctg acggcggccc atccaacgct
    14401 tccgatcccc agctacgcca gaatcactaa cctggctaac gggcgaatga tcgtggtgcg
    14461 cattaatgat cgcggccctt acggcaacga ccgcgttatt tcgctttctc gcgcggcagc
    14521 tgaccgtctt aacacgtcaa acaacaccaa agttcgtatc gatccgatta ttgtcgccca
    14581 ggatggttcg ctttctggtc ctggtatggc ttgtaccaca gtcgccaaac agacttacgc
    14641 cctgcctgca cctcccgatt taagcggtgg cgcgggaaca agttcagtgt ctggcccgca
    14701 gggtgacatt cttccggtca gtaattcgac gctaaaaagc gaagatccga ccggcgcgcc
    14761 ggtaaccagt agcggtttcc tcggcgcacc aacgacctta gcgcctggtg tactggaagg
    14821 cagcgaaccg acgcctgcgc cacagcccgt tgttacagct ccgtcgacaa cgcctgcaac
    14881 ctcgcctgca atggtgacac cgcaagccgc ctcgcaaagc gccagcggca actttatggt
    14941 gcaagtcggg gccgttagcg atcaggctcg tgcgcaacag taccaacagc aactgggaca
    15001 gaagttcggc gtccccggtc gcgtaactca aaatggcgcg gtctggcgga tccagcttgg
    15061 ccccttcgcc agcaaagccg aagccagtac cttgcagcaa cgtttgcaaa ccgaagccca
    15121 attacagtca tttattacca ccgcgcagta gcgtaaagca ggcatctgat gtgtcaattt
    15181 ctgtaaatga cgttaacaaa gtcacgcgga aagtcagatg cctgccggta gtgcatttgc
    15241 tatagtaggg cacttttttt aattccatca cggatgtcgt agttcagacc atgaatacca
    15301 ttttttccgc tcgtatcatg aagcgcctgg cgctcaccac ggctctttgc acagccttta
    15361 tctctgctgc acatgccgat gacctgaata tcaaaactat gatcccgggt gtaccgcaga
    15421 tcgatgcgga gtcctacatc ctgattgact ataactccgg caaagtgctc gccgaacaga
    15481 acgcagatgt ccgccgcgat cctgccagcc tgaccaaaat gatgaccagt tacgttatcg
    15541 gccaagcaat gaaagccggt aaatttaaag aaactgattt agtcactatc ggcaacgacg
    15601 catgggccac cggtaacccg gtgtttaaag gttcttcgct gatgttcctc aaaccgggca
    15661 tgcaggttcc ggtttctcag ctgatccgcg gtattaacct gcaatcgggt aacgatgctt
    15721 gtgtcgccat ggctgatttt gccgctggta gccaggacgc ttttgttggc ttgatgaaca
    15781 gctacgttaa cgccctgggc ctgaaaaaca cccacttcca gacggtacat ggtctggatg
    15841 ctgatggtca gtacagctcc gcgcgcgata tggcgctgat cggccaggcg ttgatccgtg
    15901 acgtaccgaa tgaatactcg atctataaag aaaaagaatt tacgtttaac ggtattcgcc
    15961 agctgaaccg taacggcctg ttatgggata acagcctgaa tgtcgacggc atcaaaaccg
    16021 gacacactga caaagcaggt tacaaccttg ttgcttctgc gactgaaggc cagatgcgct
    16081 tgatctctgc ggtgatgggc ggacgtactt ttaaaggccg tgaagccgaa agtaaaaaac
    16141 tgctgacctg gggcttccgt ttcttcgaaa ccgttaaccc actgaaagta ggtaaagagt
    16201 tcgcctctga accggtttgg tttggtgatt ctgatcgcgc ttcgttaggg gttgataaag
    16261 acatgtacct gaccattccg cgtggtcgca tgaaagatct gaaagccagc tatgtgctga
    16321 acagcagtga attgcatgcg ccgctgcaaa agaatcaggt cgtcggaact atcaacttcc
    16381 agcttgatgg caaaacgatc gagcaacgcc cgctggttgt gttgcaagaa atcccggaag
    16441 gtaacttctt cggcaaaatc attgattaca ttaaattaat gttccatcac tggtttggtt
    16501 aaaaattaaa cacttgaaag tgtaatttcc gtccccatat actaagcatc agtaaaaaaa
    16561 ctcccgcctt ctggcgggag ttgctattta attacgttac gccggagctg acatgaaaac
    16621 caaacttaac gaactgcttg aattccctac tccttttact tacaaagtta tggggcaggc
    16681 gttacctgag ctggttgatc aggtggttga agtggtacag cgccatgcgc caggtgacta
    16741 caccccaacg gtaaaaccaa gcagcaaagg caactaccac tcggtatcta tcactatcaa
    16801 cgccactcat atcgagcagg ttgaaatact gtatgaagaa ctgggcaaaa tcgatattgt
    16861 ccgcatggtt ctgtaactcg cttctccgtt acccggctcc tggtcgggta actcccctct
    16921 cctcgctgtg atatactttt cccccacttt tactcattct ccacggagat gccgttttgt
    16981 atcaggataa aattcttgtc cgccagctcg gtcttcagcc ttacgagcca atctcccagg
    17041 ctatgcatga attcaccgat acccgcgatg atagtaccct tgatgaaatc tggctggtcg
    17101 agcactatcc ggtattcacc caaggtcagg caggaaaagc ggagcacatt ttaatgccgg
    17161 gtgatattcc ggtgatccag agcgatcgcg gtgggcaggt gacttatcac gggccgggac
    17221 aacaggtgat gtatgtgttg cttaacctga aacgccgtaa actcggtgtg cgtgaactgg
    17281 tgaccttgct tgagcaaaca gtggtgaata ccctggctga actgggtata gaagcgcatc
    17341 ctcgggctga cgcgcctggt gtctatgtcg gggaaaagaa aatttgctca ctgggtttac
    17401 gaattcgacg cggttgttca ttccacggtc tggcattaaa cgtcaatatg gatctttcac
    17461 catttttacg tattaatcct tgtgggtatg ccggaatgga aatggctaaa atatcacaat
    17521 ggaaacccga agcgacgact aataatattg ctccacgttt actggaaaat attttagcgc
    17581 tactaaacaa tccggacttc gaatatatta ccgcttaatt ccatacatca atggcccaat
    17641 ttacactggg tcattactca taatacctgc taatgcttta catctccttc gcgtttgtat
    17701 attttcttta tcacttgcag aaatgcggtg ccacgccttg ctccgtaact caccccattg
    17761 attaacctat tgaaatagtt gattatggtg agcaaaagcg ttccgttcca attagacata
    17821 agattattgt aattttttaa atattatttt tccatgaata aaattggagt aagtgcgtgg
    17881 atagtaataa tcaaattgaa ccctgtttaa gcagaaagtc gtcagaaggt aaaccacaaa
    17941 tatttacaac cttacgaaat attgctctta accttctgac tatttttgaa gctgtatatg
    18001 tacataaagg gatcgttaat gcagcgaaag tgcttaatct gcccccctcg gcaatcagtc
    18061 agtctattca gaaactgcgc gttatattcc ctgacccatt gtttattcgc aaaggccaag
    18121 gtgtcactcc taccgcattt gcgatgcatc tacatgagta tatcagtcag ggccttgagt
    18181 ccattcttgg cgcgctggat atcgaaggaa gctatgataa gcaacgaacg ataactattg
    18241 cgaccactcc ctcggtcgga gccctggtcc ttcctgtcat ctatcgggcg attaaaactc
    18301 actatccgca gcttttactg cgcaacccgc ccatcagcga cgcggaaaac caactcagtc
    18361 agtttcaaac cgatctcatc atcgataaca tgttttgcac caatcgtacg gtgcaacatc
    18421 atgttctgtt caccgacaat atggtgttaa tttgccgcga gggaaatcca ctactctctt
    18481 tagaagatga cagagagact atcgacaacg ctgcgcatgt acttctgtta ccggaagagc
    18541 aaaatttcag cggtctgcgg cagagagttc aagaaatgtt tccggaccgg caaatcaatt
    18601 tcaccagcta caacattttg acaatcgctg cactggttgc caacagtgac atgttagcga
    18661 ttattcccag ccgtttttat aacctgttta gccgctgctg gccgctggaa aaactgcctt
    18721 ttccgtcctt aaataaggag caaatagatt tctctatcca ctacaacaaa ttcagcctgc
    18781 gtgatcccat cctgcacgga gtaatagatg ttatccgtaa tgcattttga aaaagtattg
    18841 ttacagccag atcacagcgc agaacgataa aatggcacaa tccaacaaca attttacatt
    18901 ttcgcgaccg ctttggctgc tttcaggtcc gtttcaatga tatactgcca gtcgttaatt
    18961 caaaaatagt tgataattac aacaatctat tgaattgaaa cgctttcctt cgtaattcgc
    19021 aactggaaca cgcacgctat gagtaaaccc attgtgatgg aacgcggtgt taaataccgc
    19081 gatgccgata agatggccct tatcccggtt aaaaacgtgg caatagagcg cgaagccctg
    19141 ctgcgcaagc cggaatggat gaaaatcaag cttccagcgg actctacacg tatccagggc
    19201 atcaaagccg caatgcgcaa aaatggcctg cattctgtct gcgaggaagc ctcctgccct
    19261 aacctggcgg aatgcttcaa ccacggcaca gcaacgttta tgatcctcgg cgctatttgt
    19321 acccgccgtt gtccgttctg tgatgttgcc cacggtcgcc cggtagctcc tgatgccaat
    19381 gaaccagtga aactggcgca gaccattgcc gatatggcgc tgcgttatgt ggttatcacc
    19441 tccgttgacc gtgatgacct gcgcgatggc ggtgcccagc actttgcgga ttgcattact
    19501 gccattcggg aaaaaagccc gcaaatcaaa attgaaactc tggtgccgga tttccgtggt
    19561 cgtatggatc gtgctctgga tattctgact gcaacgccac cagatgtgtt caaccataac
    19621 ctggaaaacg taccgcgtat ttaccgtcag gtacggcctg gggcagatta caactggtcg
    19681 ctgaagctgc tggaacgctt taaagaagcg catccggaaa tcccgaccaa gtctggtcta
    19741 atggtgggac tgggtgaaac caatgaagaa attattgagg taatgcgcga cctgcgccgt
    19801 catggtgtga cgatgttaac gctggggcaa tatttgcagc caagccgcca tcacctgccg
    19861 gttcaacgtt acgttagccc ggatgagttc gacgaaatga aagccgaagc gctggcgatg
    19921 ggctttaccc atgctgcatg cggtccgttt gtccgttctt cttaccacgc cgatttgcag
    19981 gcgaaaggga tggaagttaa gtaatcctgt aataattact tacatctgtc tgataaaaaa
    20041 cccgcttttt gaagcggttt ttttgtatcg aacaagatat tgagggagcg tcctgctcgc
    20101 cacgtcactc tttatgagag agcttttcag cctgaagatc aacgtctgcg ccttttttcg
    20161 ccgcagcatc atcatcattc atcgccttct tgaacccttt aatggccgct ccaaggtctc
    20221 cgcccagcgt acgtaacttc ttagtcccaa acagcagaac gaccagcgcc gcaactacta
    20281 gcagtttggt aatactaatc tcacccatag ataccttctt gacatataac cggcaacaga
    20341 acgcgcctta aaaaccagag aatattaacg gtcattcgac gcgcgcacac aatagcaatc
    20401 tgtaacaagg tgaatcaagc gccgagtaaa aaaacatcat aataattgcg gcggcgcaaa
    20461 gcgacggttg tttaagacgg gcagttgcgc gcgcacctga cgcacacgtt cgggcgtcac
    20521 ttccgccata atgagtgcag gcatttctga cgctgccgca atggtgacgc caaagggatc
    20581 tataatccgg ctttgcccga tatttttgtt cccgcactcg cccgccgcca ccatataaca
    20641 ggtggtatcc agcgcacgag cggcaagcaa cgttgaccag tgatgctctt tgagcggccc
    20701 gcgaacccag gcggcaggaa gtaccaggat ttcagctccc tgtaatgcct gtgccagcgc
    20761 cagctctgga aagcgtaagt cataacaggt catcagaccg accttcatcc cttccacctc
    20821 cagtaacgga gcgatttcat taccagcatc aacacggcgt gattcctgaa tggcaaatgc
    20881 atcatagaga tgcagtttgg cataacgggc gacgatgttt cctgcctgaa gtgccaccag
    20941 catattccat gcgcgccccg gcgttgaagg aacatgaatc gtcagaattg tcgtcatcat
    21001 gttacgttta ctttctcgcc gtaaacgtcc gaggaattcg ccttccagca gctgtgctga
    21061 tttaaccgat agatctgcat catgatcatc gcgtgccagc aatgcttccg gcaggacaaa
    21121 cagcgatacg tcgttttccg ccgcctgcgc catcaacgag gcacaaatct cagcgttctt
    21181 ttcccacaca gatgtaacag caaactgtcc tgcagcaacc agcattgcca cctcctgtca
    21241 gagtcgtaaa attcgccaac gacgattatt cggcgttaca cttatcactc atacaaatca
    21301 aatagcagga ttttgcagtg ttacaacttc ttttagcagt ttttattggc ggtggtacgg
    21361 gaagcgtggc gagatggctg ttaagtatgc gatttaaccc actgcatcag gcgattccgt
    21421 tggggacgct gacagcaaac ctgattgggg cattcatcat aggaatggga ttcgcatggt
    21481 tcagcaggat gacgaacatt gatccagtgt ggaaagtatt aatcaccacc ggattttgtg
    21541 gcggtctaac aaccttctca acattttcgg cagaagtggt gtttttgtta caagagggtc
    21601 gctttggctg ggcattactg aacgttttcg tcaaccttct ggggtctttt gccatgacag
    21661 cactggcttt ctggctgttt tcggcctcaa ccgcacacta aagacccaaa aaaaacccgc
    21721 tgattaagcg ggttttgaat tcttgctgac gtatcttaca gagcgattac gtttgcagca
    21781 gaagggcctt tggcaccgtt agtgatttcg aactctacgc gctgaccttc agcaagagtt
    21841 ttaaaaccat tagtctggat tgcagagaag tgtacgaaca cgtctttgct gccgtcttcc
    21901 ggagtaatga aaccgaatcc tttggactca ttaaaccact taacgttacc tttaatctta
    21961 gacatcaaaa ttacctttac atgaaaaata gacacaaatg ctgcgtcggt taccagtaca
    22021 ccaattgtgg tacgctttgt ccagtgcaac tttactaaaa agtgataaaa gtcgcgttat
    22081 ttttgatgtt acttatttta gctattgatt ttaaagaagt tactaaaact tcatttgtct
    22141 caaaactgaa agcgcatcca ggcaaagtac acattgccat tgttgtaggt acccggaatg
    22201 taggtcatct gaaaagtcac tgggccataa cccacggagg ccaatggcag tagaaccggg
    22261 agagggatgt aattccagtt atcgcgtgcc gttacgccag cggtgaatcc cagacctaaa
    22321 tgaaaatttt catccgccag cggtcgccag gtactttccc atccgtatcc ggcaatcggt
    22381 tcccatttgt tccacgagtc cttaaatgcc atggcataca ggccatgcca gtttcctttt
    22441 tcatcccaac gcgacaggcc aaaaccgcca ccccacggtc gctcgttata gcgatcggtt
    22501 ttttctttgt cgtaagcgaa acgtgcatgc caggtgatgg caggaatata taaatcataa
    22561 tgttcaggct gttgccaggt tggtgcaata ttttctctaa acgttgtcat ccactcatct
    22621 gcgttagcaa aaactttacc aacgctgatt aactgaataa aaacaaagga aaagatagcg
    22681 acatatttac tcacgttcat ttgtgaccat aaaacattta tcaaaaatct actactagca
    22741 tagcaaagct acaattaaca taaccttaat agacccaaca taaagaataa tctgaatagc
    22801 tgctctattt atttccgctt gttcaagtta aatatttccg cgcatcgatt aaagatgatg
    22861 cgtcgttttc tgcgatggga atagtcaaaa aagaaaaacc aagtcttttt tgatgacaaa
    22921 atgcaatcaa ggaaaaatta ttttattttt taacgagata caacaatcac cttaacaaag
    22981 tatataatat atatcgtcaa cctatgctca tattagatta ttttttgagc gcacagccgc
    23041 agctaacacc attgcaatta acaaatttgc atcaatccac catcaatttg cacacattat
    23101 tatgtgataa ttgccaaccg ctaaatatgc gttttgttat ctatgtataa aaacagtaac
    23161 ttcaatgtct taatggcagt ttttcttgat tttaatcagc attcatcgcc aatttattgg
    23221 gcatattttt tccttaagct ttaggaattt tttattattt actttggggc ctggagacag
    23281 gaaaaattat gctgacattc attgaactcc ttattggggt tgtggttatt gtgggtgtag
    23341 ctcgctacat cattaaaggg tattccgcca ctggtgtgtt atttgtcggt ggcctgttat
    23401 tgctgattat cagtgccatt atggggcaca aagtgttacc gtccagccag gcttcaacag
    23461 gctacagcgc cacggatatc gttgaatacg ttaaaatatt actaatgagc cgcggcggcg
    23521 acctcggcat gatgattatg atgctgtgtg gatttgccgc ttacatgacc catatcggcg
    23581 cgaatgatat ggtggtcaag ctggcgtcaa aaccattgca gtatattaac tccccttacc
    23641 tgctgatgat tgccgcctat tttgtcgcct gtctgatgtc tctggccgtc tcttccgcaa
    23701 ccggtctggg tgttttgctg atggcaaccc tatttccggt gatggtaaac gttggtatca
    23761 gtcgtggcgc agctgctgcc atttgtgcct ccccggcggc gattattctc gcaccgactt
    23821 caggggatgt ggtgctggcg gcgcaagctt ccgaaatgtc gctgattgac ttcgccttca
    23881 aaacgacgct gcctatctca attgctgcaa ttatcggcat ggcgatcgcc cacttcttct
    23941 ggcaacgtta tctggataaa aaagagcaca tctctcatga aatgttagat gtcagtgaaa
    24001 tcaccaccac tgctcctgcg ttttatgcca ttttgccgtt cacgccgatc atcggtgtac
    24061 tgatttttga cggtaaatgg ggtccgcaat tacacatcat cactattctg gtgatttgta
    24121 tgctgattgc ctccattctg gagttcctcc gcagctttaa tacccagaaa gttttctctg
    24181 gtctggaagt ggcttatcgc gggatggcag atgcgtttgc taacgtggtg atgctgctgg
    24241 ttgccgctgg ggtattcgct caggggctta gcaccatcgg ctttattcaa agtctgattt
    24301 ctatcgctac ctcgtttggt tcggcgagta tcatcctgat gctggtattg gtgattctga
    24361 caatgctggc ggcagtcacg accggttcag gcaatgcgcc gttttatgcg tttgttgaga
    24421 tgatcccgaa actagcgcac tcttccggca ttaacccggc gtatttgact atcccgatgc
    24481 tgcaggcgtc aaaccttggc cgtacccttt cgcccgtttc tggcgtagtc gttgcggttg
    24541 ccgggatggc gaagatctcg ccgtttgaag tcgtaaaacg cacctcggta ccggtgcttg
    24601 ttggtttggt gattgttatc gttgctacag agctgatggt gccaggaaca gcagcagcgg
    24661 tcacaggcaa gtaaatagta atgccggagg caagtttcct ccggctttat catgtcaccc
    24721 actgtggtat atgcgttgtg gtctgccaac tttgccgtga acaatttcag caataatcag
    24781 atggcggctg gcgcaatatt caagataacg tctggcagac gtgcggctga tggtcagtgc
    24841 ctgcgccacc gtttctgccg tatgttgcac accaggctct ttaaacagtt ttcgcaccgc
    24901 gtttagcgtc aagggatcaa tgccggtcgg cagttcgtct ttaggttcac cgcgagcata
    24961 ggcattaaac atctcatcaa tttgcttctg gctggcgcta tcaatacttt ccagcatatg
    25021 tttacgctgg cggaaacggg ttagcgtttg ccccagccgt tcataggcaa tgggcttaat
    25081 gagataatca aatacaccac aacgtacggc ttcagacacc gtttccatat cgctggctgc
    25141 agtggtaaac accacgtcgc cgggataatg cgcctgcacc agttcatgca ataaattaat
    25201 ccctctgccg tcaggaagat agttatcgag caagattagc cccggcttaa aacgctcgat
    25261 catcattcgg gcctgcgcca ggtttcccgc cagtaatatc tgactgaatc cgggaatgtg
    25321 acgaatatat tccgcatgca tctctgccag cggcgtttcg tcctcaacga tcaatagggt
    25381 taatggagct gtcattaggt ttcactttcg gaatatagat tgaaaataag gtaccgcagg
    25441 gatcattatc ttcgagagtg ataacaccac cgcagcgcgt tacgtagctg gcaatcaagt
    25501 acaacccaat gccatgttca ccgggctcgt cagcacgcgt actgaccccc tgctcaaata
    25561 ttttgtctcg tagagactct ggaacgccgc agccctgatc ggcgacttca atcaccacat
    25621 catcgccttc atcgctgagg aataattcaa cgatcttgtt tccttcatcg ctacgcaggc
    25681 tggcttcgaa ggcgttatca agtaaattgc ccacaatggc tgcaaactcg gtgctatcca
    25741 gtcctggcgg cagttgcgaa agctggctac cggggacaat gatcattttt agccccagtt
    25801 cccgggcgcg ctgcacttta ccaaaaagca gccccgccac ctagcgatcg gcaaacgcct
    25861 cgcgcaggct gtcaataagc tgttgctggg cctgagactc cccctgcacc atcgccagca
    25921 cgcgatcata ctctttcatc tgcaacagac cattgagcgt cgacatccaa ttgagatgct
    25981 cgtgtcgcaa tgtacgaagg ctctcaacgt attgttttat ttgcgtcagt tgcgcattga
    26041 gggtggaaat ttcgtcttta ctgcgaaagc tgataatggc ccccagcaaa tcatcacctg
    26101 aacgaatagc ttcccgattg gcaataacgc tcagaccgtt aaagttagcc accatatcct
    26161 gacgtttttc atcaatctgt tcggtaaaga aatcggcggg cctgaccact tcagcaatgg
    26221 gtttacccaa ccattgccgt ccgggggaac tcagccccag catctttctt gcgttacgat
    26281 tgatggcggt aatgtaaccg tgcggatcca ccgcaatcag cccttcataa accgaactaa
    26341 acagcgcctc ttgctgacgg accacgcgtg cgatttgctt tggctccatg cccatcatct
    26401 gccgacggat atgcgcggcc aggaaccacg acagcaacat cagaatccct aacagcacga
    26461 caaacacacc tgccatcggt aataaaaact cagcccgcca gctatcgatt ttactcacca
    26521 ggtagccaat cgacaccacg ccgatgactt ttccatcgtc atcaaagatt ggcgttttgg
    26581 cgcgcatcgc catccccatt gaccctttcc cggtaatgaa gtagctctcc cctttctcca
    26641 gcgcgccctg tttggtgaac tgcataggat aaccaatttt ctccggatta ggatggtaaa
    26701 ggcggatcga gtgccggtcg ccatcaccac ataatcaaaa tcggtatctc tttgtaattt
    26761 gttagcgatg gtcgccagcc gtttgtagtc acgcgttttc accgcagaga tgacactgtc
    26821 attggaggca ataattttcg cctgattcat tgccatgtcg cgtacatgaa gcgttaaata
    26881 gtcctcaaaa ctggccgtaa aatattgcgc caaggctgca atgacaaata ttgagaacac
    26941 cagaatcagc aaaaagatac gcagcggaaa tgccagtctt tggaaaaatg caaactgttt
    27001 attctcgtta agctgcaaca ttgttttcct tgcgggttat cccgagcctc tttgacagat
    27061 gtaattaaaa tgttgaatca aaatacatag atattaatta tgatcgtggc aaattttatt
    27121 cattaaatca attaaatcac ttaaacctgc aggtcatttc gtaattacat taattaaaaa
    27181 acttaaacca ttaaataaat aaaaatttca cgccgaaata ctccttagga tgtatagcga
    27241 aaggagaaaa agatatacct cgatcacccc cctttctccc aagtgaaaat aaaaggttat
    27301 cagtttgcaa cattgaacaa cattcgttgc aaatcgataa caacatgcac cttcaggata
    27361 ctatttatta tgttcggcaa tgatattttc acccgcgtaa aacgttcaga aaataaaaaa
    27421 atggcggaaa tcgcccaatt cctgcatgaa aatgatttga gcgttgacac cacagtcgaa
    27481 gtatttatta ccgtaacccg cgatgaaaag cttatcgcgt gcggtggaat tgccggaaat
    27541 attattaaat gcgttgctat cagtgaatcc gttcgcggtg aaggactggc gctgacatta
    27601 gccactgaac tgataaacct cgcctatgag cggcacagca cgcatctgtt tatttatacc
    27661 aaaaccgaat acgaggcgct gttccgccag tgcggttttt ccacgctgac cagcgtaccc
    27721 ggcgtgatgg tgctgatgga aaacagcgcc acgcgactga aacgctatgc cgaatcgctg
    27781 aaaaaatttc gtcatccagg gaacaagatt ggctgcattg tgatgaacgc caatcccttt
    27841 acgaatggtc accgttatct gattcaacaa gctgcggcac agtgcgactg gttgcatctg
    27901 tttttagtca aagaagattc ttcacgcttc ccctatgaag accggctgga tctggtgtta
    27961 aaaggcaccg ccgatattcc acgcctgact gtgcatcgcg gctccgaata catcatctcc
    28021 cgcgctacgt tcccttgcta cttcattaaa gaacagagcg tcattaacca ttgttacacc
    28081 gaaattgatc tgaagatttt ccgtcagtac ctcgctcccg cactgggtgt aactcaccgc
    28141 tttgtcggta ctgaaccctt ttgtcgcgtt accgcccagt acaaccagga tatgcgctac
    28201 tggctgaaaa cgccgactat ctccgcaccg cccatcgaac tggttgaaat tgagcggctg
    28261 cgttaccagg agatgccgat atccgcttcc cgggtacgtc aactgctggc gaaaaacgat
    28321 ctcacggcta tcgcgccgct ggtccctgca gtcacgctgc attatttgca gaacctgctt
    28381 gagcactccc gccaggacgc ggcagctcgt caaaagaccc ccgcatgaga aacaggtgaa
    28441 aaatgaaaat aaaccagccc gccgttgcag gcacccttga gtctggggat gtgatgatac
    28501 gcatcgcccc actcgatacg caggatatcg acctgcaaat caacagcagc gttgagaaac
    28561 agtttggcga tgcaattcgc accaccattc tggacgttct cgcccgctac aacgtgcgcg
    28621 gcgtacagct gaatgtcgat gacaaaggca cactggactg cattttacgt gcacgactgg
    28681 aagccctgct ggcacgcgcc agcggtatcc cgactctgcc atgggaggat tgccaatgat
    28741 ttccgcttcg ctgcaacaac gtaaaactcg cacccgccgc agcatgttgt ttgtgcctgg
    28801 tgccaatgcc gcgatggtca gcaactcctt catctacccg gctgatgccc tgatgtttga
    28861 cctcgaagac tccgtggcat tacgtgaaaa agacaccgcc cgccgcatgg tttatcacgc
    28921 gctgcaacat ccgctgtatc gcgatattga aaccattgtg cgtgtcaacg cgctggattc
    28981 cgaatggggt gttaacgacc tggaagccgt cgttcgcggt ggtgcggacg ttgtgcgtct
    29041 gccgaaaacc gataccgctc aggatgttct ggatattgaa aaagagatcc tgcgtatcga
    29101 aaaagcctgt ggtcgtgaac ccggcagcac cggcctgctg gcggcgattg aatctccgct
    29161 gggcattacc cgcgcagtgg aaatcgctca cgcttccgag cgtttgatcg gtatcgccct
    29221 cggtgcagaa gactatgtgc gcaacctgcg tacagaacgc tccccggaag gaactgaact
    29281 gctgttcgca cgctgttcca ttttgcaggc cgcgcgctct gcgggtattc aggcgttcga
    29341 taccgtctat tccgacgcta acaacgaagc cggattcctg caagaagccg cccacatcaa
    29401 acagctgggc tttgacggca aatcgctgat caacccgcgt cagattgatc tgctgcacaa
    29461 cctctacgca ccgacccaga aagaagtgga tcacgcccgc cgcgtcgtag aagccgctga
    29521 agccgccgct cgcgaaggcc tcggcgtggt ttccctgaac ggcaagatgg tggacggtcc
    29581 ggttatcgat cgcgcccgtc tggtgctctc ccgtgcagaa ctttccggca tccgcgaaga
    29641 ataaggcaat caaaatgacg cagaaaattg aacaatctca acgacaagaa cgggtagcgg
    29701 cctggaatcg tcgcgctgaa tgcgatcttg ccgctttcca gaactcacca aagcaaacct
    29761 accaggctga aaaagcgcgc gatcgcaaac tgtgtgccaa cctggaagaa gcgattcatc
    29821 gctctggttt acaggacggc atgacggttt ccttccatca cgctttccgt ggcggtgacc
    29881 tgaccgtcaa tatggtgatg gacgtcatcg cgaagatggg ctttaaaaac ctgactctgg
    29941 cctccagctc cctgagtgat tgccatgcgc cgctggtaga acacattcgc cagggcgtgg
    30001 ttacccgcat ttatacctct ggcctgcgcg gtccactggc ggaagaaatc tcccgtggtc
    30061 tgctggcgga accggtgcaa atccactctc acggcggacg tgtgcatctg gtacagagcg
    30121 gcgaactgaa tatcgacgtg gctttcctcg gcgtcccatc ctgtgatgaa ttcggtaatg
    30181 ccaacggtta caccggtaaa gcctgctgtg gctccctcgg ctatgcaatg gttgatgccg
    30241 acaacgcaaa acaggtcgtg atgcttaccg aagaactgct gccttatccg cataatccgg
    30301 caagcattga gcaagagcag gttgatttga tcgtcaaagt tgatcgcgtt ggcgatgctg
    30361 caaaaatcgg cgctggtgcg acccgtatga ccactaaccc gcgcgaactg cttattgccc
    30421 gtagcgctgc ggatgtgatt gtcaactctg gctacttcaa agaaggtttc tccatgcaaa
    30481 ccggcaccgg cggcgcttcg ctggcggtaa cccgtttcct ggaagacaaa atgcgtagcc
    30541 gcgatattcg cgccgacttc gccctcggcg gtattactgc aacgatggtt gatctgcacg
    30601 aaaaaggtct gatccgcaaa ctgctggatg tgcagagctt tgacagccat gctgcgcaat
    30661 cgctggcccg taaccccaat cacatcgaaa tcagcgccaa ccagtacgct aactggggtt
    30721 cgaaaggcgc atcggttgat cgtctcgacg tggtggtact gagcgcgctg gaaattgaca
    30781 cccagttcaa cgttaacgtg ctgaccggct ctgacggcgt actgcgtggt gcttccggtg
    30841 gtcactgcga taccgcgatt gcctctgcgc tttccatcat cgtcgcgccg ctggtacgcg
    30901 gtcgtattcc gactctggtg gataacgtgc tgacctgcat caccccgggc tccagtgtcg
    30961 atattctggt cacagaccac ggtatcgcag ttaacccggc acgtccggag ctggcagaac
    31021 gtctgcagga agcgggcatt aaagtggttt ccattgagtg gctgcgtgaa cgtgcgcgtc
    31081 tgctgaccgg tgaaccacag ccgattgaat tcaccgaccg cgtcgttgcc gttgtgcgtt
    31141 accgcgatgg ctcggtgatc gatgttgtac atcaggtgaa ggaataagcc atgcacctgc
    31201 ttcctgaact cgccagccac catgcggtgt caattcccga gctgctcgtc agccgggatg
    31261 aaaggcaagc acggcaacac gtctggctca agcgccatcc tgttccactg gtctccttta
    31321 ccgtggttgc gcctaggccg attaaagaca gtgaggtcac acgccgaatt tttaatcatg
    31381 gcgtgacagc cttgcgtgcc ttagccgcaa aacagggctg gcaaattcag gagcaggctg
    31441 cactggtttc cgccagcggg ccggagggta tgttgagcat tgccgcccct gctcgcgacc
    31501 tcaagctcgc caccattgag cttgaacata gtcatcctct cgggcggtta tgggatatcg
    31561 atgtcctgac gcccgaaggc gaaattctct cccgccgcga ctattcactg ccgcctcgcc
    31621 gctgcctgtt gtgcgagcaa agcgcagccg tctgcgcgcg tggaaaaccc atcaactgac
    31681 cgatttactc aaccgcatgg aggcactgct gaacgatgtc gatgcctgca acgtcaacta
    31741 aaaccacaaa gcttgcgacg tcattaatcg atgagtacgc cctgctgggc tggcgcgcca
    31801 tgctgactga agtcaatctg tcaccgaaac caggtctcgt ggatcgcatt aactgcggtg
    31861 cgcataaaga tatggcgctg gaagatttcc accgcagcgc gctggcgatt cagggctggc
    31921 taccccgttt cattgaattt ggtgcctgta gtgcggaaat ggcaccagaa gcggcactcc
    31981 acggattacg cccaattggt atggcttgca aaggtgatat gttccgcgcc accgcgggcg
    32041 taaacacgca taagggcagc attttttctt tagggctact gtgtgcggca attggccgtt
    32101 tgcttcagct caaccagtcg ctaacgccaa caaccgtttg ttctacggcg gcaagtttct
    32161 gccgtggcct gaccgatcgc gaactgcgta ccaataattc acaactgacg gcaggtcaac
    32221 ggttgtacca gcagcttgcc cttaccggcg cacgcggtga agccgaagcg ggttatccac
    32281 tggtgatcaa ccacgccttg ccgcattacc tcactctgct ggatcagggg ttagatcctg
    32341 aactggcatt gctcgatacc ttgctcctac tgatggcgat caacggcgat accaacgttg
    32401 cttcgcgcgg tggcgagggg gcctgcgctg gctacagcgc gaggcgcaaa cattattgca
    32461 aaaagggggc attcgaaccc ccgccgatct cgattatctc cggcagttcg acagggagtg
    32521 tatcgaacga aatctcagtc caggcggcag tgccgacctg ctgatcctta cctggttttt
    32581 agcacagatt taattattta agcacttgat aaatttggaa atattaattt tcggagaacc
    32641 cgtatgtctt tagcaaaaga taatatatgg aaactattgg ccccactggt ggtgatgggt
    32701 gtcatgtttc ttatccctgt ccccaacggt atgccaccac aggcatggca ttacttcgct
    32761 gtgtttgtgg caatgattgt cggcatgatc ctcgagccaa ttccggcaac agcgatcagt
    32821 tttattgcgg ttactatttg cgttattggc agtaattacc tgctctttga tgccaaagaa
    32881 ttagctgacc cagcgtttaa tgcgcaaaaa caggcgctga aatggggtct ggctggtttt
    32941 tccagcacca cggtatggct ggtatttggc gcatttattt ttgcattagg gtatgaagtt
    33001 tccgggttag gtcgtcgcat tgcccttttc ctggtgaaat tcatgggcaa acgcacgctg
    33061 acgttgggtt atgcgattgt cattatcgac attctgctgg cgccgtttac accgtccaac
    33121 accgcgcgta ccgggggtac ggtttttccg gtcattaaaa acctgccgcc gttgtttaaa
    33181 tcattcccca acgatccgtc cgcgcgtcgt attggcggct atttgatgtg gatgatggtc
    33241 attagtacca gtctgagttc gtccatgttt gtcaccggtg cggcaccaaa cgtgctgggt
    33301 ctggagttcg tcagcaaaat tgccggtatc cagattagct ggttgcagtg gttcctctgc
    33361 ttcctgccgg ttggggttat cttgcttatc attgcgccgt ggctttccta cgtgctgtac
    33421 aaaccggaaa tcacacacag tgaagaagtg gcaacctggg cgggtgatga actgaaaacc
    33481 atgggtgcgc tgacacgcag agagtggaca ctgattggcc ttgtattgct cagcttaggt
    33541 ttgtgggttt ttggcagtga agtcattaat gctactgcag ttggtctgct ggcagtttcg
    33601 ctaatgctgg ccctgcacgt tgtgccttgg aaagatatta cccgctataa cagcgcatgg
    33661 aacacgctgg tcaacctggc aactctggtt gtgatggcta acggcctgac tcgttctggc
    33721 tttattgact ggttcgccgg taccatgagt acgcacctgg aaggattctc accaaacgca
    33781 acggtgattg tactggttct ggtgttctac tttgcacact acctgtttgc cagcctgtct
    33841 gcgcacaccg caaccatgct gccggttatt ctggccgtcg gtaaaggtat tccgggcgta
    33901 ccaatggaac aactgtgtat cctgctggtg ctgtctatcg gtatcatggg ctgtctgacg
    33961 ccctatgcaa ccggtcctgg ggtgattatt tacggctgtg gctatgtgaa atcaaaagat
    34021 tactggcgtc ttggcgcaat cttcggggtg atttatatct ctatgttgct gttggttggc
    34081 tggccgattc tcgccatgtg gaactaatac gttcgccaaa cgctgaataa atcatcacgc
    34141 ccgccaggta agcccacctg gcgggcgtga tgatttaata gatagtattc agtgtatgta
    34201 tgagttccac acccattatg aaagaattct ggcgtaacgc cgcgttgctc gcggtttctc
    34261 tgcttccctt ctcttctgcc aacgccgtag cgttgcaggc aaaacagtat ggcgattttg
    34321 atcgctatgt cctggccctc tcctggcaaa ccggattttg ccagagtcaa cacgatcgaa
    34381 atcgtaacga acgagatgaa tgtcgcctgc aaaccgaaac gaccaacaaa gctgattttc
    34441 tgaccgtaca tggtctgtgg ccaggattgc ctaaatcggt tgctgcccgt ggtgttgatg
    34501 aacgccgctg gatgcgcttc ggttgcgcta ctcgcccaat cccgaatcta ccagaagcgc
    34561 acgccagccg gatgtgttca tcgccggaaa ccgggttatc actggaaacg gccgctaaac
    34621 taagtgaagt catgccagga gctggcggac gttcctgcct ggaacgctac gaatatgcca
    34681 aacacggtgc ctgctttggt tttgatccgg acgcatactt cggtacgatg gtacgcctga
    34741 atcaagaaat taaagagagc gaagccggaa aattccttgc ggataattac ggtaaaacag
    34801 tgagccgccg tgactttgac gccgcctttg ccaaaagcag gggaaaagag aacgtgaaag
    34861 cagttaagct aacgtgccag ggtaaccctg cgtatttgac tgaaattcag atctcgatca
    34921 aagctgacgc catcaacgct ccgctttctg caaactcatt cttgccacaa ccacacccaa
    34981 gcaactgtgg caaaaccttt gtgattgata aagtgggtta ttaatcatct gatttacaaa
    35041 acacgctaat tcgtcttcca taaaccgtga cgattaagaa ttatacataa tgcgctgcat
    35101 tgaggaattc cctgaatgtg acgcaaatca cttcaaagag tgagcaacag tcagtatcat
    35161 catgtgagtt aaaccctcgc cgcctgacgg tgagggtttt cttttgggta tgtttatctg
    35221 cgacactcgc agtaccgacg acatggagta aaaatgtcca gaccaactat catcattaac
    35281 gacctggatg ccgaacgcat cgatattctg ctggagcaac ccgcctatgc tggtttgcca
    35341 atcgccgacg cgttaaacgc agagttggat cgcgcccaaa tgtgttcgcc agaagagatg
    35401 ccacacgacg tggtgacaat gaacagccgg gttaaattcc gcaatcttag cgatggcgaa
    35461 gtgcgtgtgc gcacgctggt gtatccggca aaaatgaccg atagcaatac tcagctttcc
    35521 gttatggctc cggtaggtgc cgcactgctg gggctgcgcg ttggcgattc cattcactgg
    35581 gaacttccgg gcggcgttgc aacccacctt gaagtgctgg aactcgaata ccagccagaa
    35641 gctgctggcg actacctgct ttaatcccat ctgcacaagc gataactcgc tttgcccaga
    35701 ggatgcactc gcatcctctt tacgcaaaat cagcaatttt tcctggttct cactgttcac
    35761 ttttgctgca aaattattcc gtttcgtttg tgggaataac catggcagaa gcattttaca
    35821 tcctgatagg atttctgatt atggcggcga ttatcgtcat ggctgtcctt tacctcgaaa
    35881 accactcctg acgatcatat tgttcccccc ggcatcgcat tcaccagacc tgaaactgcc
    35941 ttctgcgcct cctctgcgct ttgtgcaccg ggtaccagaa tcaccttacg gcactcctct
    36001 tcacgttttt cgaaaatctc atatccccgg gcggcctctt caaacggcat atagtgggta
    36061 acaatttctt ctggtttcag taatcctttc tcaattaacg gtaataattc tcccagccat
    36121 gcgtgaacgt gggtctgtcc cattttaaac gtcaaccctt tatcaaaggc gtcaccaaac
    36181 aggaaaccgt gaataaatcc agcgtagacg cccggtacgc taacaatgcc gccacgcctg
    36241 accgccgcaa tacactggcg caacgcttta ccgctgctgc cctccagttt caggttagtc
    36301 agcaccgttt ccgtggtgct gcctttcgct tcaaaaccga cggcgtctat tactgcatcc
    36361 acgccccggt gacctgccgt ttgttcaata attgactgtg ccggatcgct atcttcatcg
    36421 aaattaatcg ggatcgcgcc gtagcggtca gcggcgaaac tcaagcggta gggatgatga
    36481 tcaacaacaa aaatctgttc cgcaccgagc aaccgtgcac aggcgattgt caacaatccc
    36541 actggaccgg caccatagac tgcaacgctt gaaccttgtt ggatctgcgc attttttgct
    36601 gcctgccatg ccgttggcag aatatcagaa aggaaaaggg ctttatcatc tgaaagcaaa
    36661 ggcggtactt taaacggccc cacattccct ttagggacgc ggacatattc cgcctgtcca
    36721 ccaggaacgc caccatacag gtgactataa ccaaacaatg ccgcgggagc tggtatctgt
    36781 tttttattga gcgcagcgcc tttacccgca ttggtatttt cgcaggcggc atattgctgc
    36841 attcgacaga aaaaacagtc gccacaagca atgacaaacg gaattaccac ccggtcgcct
    36901 ttttgcaaat tttttacgtc ctttccggtt tcaacgactt cccccataaa ttcatgacca
    36961 aaaatatcgc catgtttaac ctggggtatt ttgcctcgat aaagatggag atcagagcca
    37021 cagatcgccg ttgccgtaat acgcagaata atatcatctg cctgttcaat gcccggatcg
    37081 ggaacatttt ctacctgaac gtgatgtggg ccgtgataag tcaatgcttt catgcaacct
    37141 ccagagacag ttcaaaaaag agtcagtctt taagggtagc tatcacagcg ggaaaacggg
    37201 cggtaccgca ggttttggga gaattcctgg tgttcagtga gaatatatta atcacagaaa
    37261 ccgttcgtaa ggaaaaagaa ccagacaaat atcagggata aatattataa tcatggcgaa
    37321 tgatttgttc atgattaaca gggagaaagg gttatgtata agacaatcat tatgccagtt
    37381 gatgtatttg aaatggaatt gagcgacaaa gctgttcgcc acgctgaatt cctcacccag
    37441 gatgacggag ttattcatct acttcacgta ctacccgggt cagccagcct gagcctggac
    37501 cgttttgccg ctgatgtgcg tcgttttgaa gagcatctgc aacatgaagc agaagaacgt
    37561 ctgcaaacga tggtcagcca cttcaccatc gatccttccc gcattaaaca acatgtccgt
    37621 tttggtagcg tgcgggatga agtcaatgag ttggcagaag aactgggggc tgatgttgta
    37681 gttatcggtt ctcgcaaccc atcgatttcg acccatctgt taggttctaa cgcctcgagc
    37741 gtgatccgcc acgccaatct gcctgtactg gtcgttcgct aacagataaa agtatttatg
    37801 ccgccctgcc tggaacatcc cggcagggct ttttaatgcc ataaaaaagc cgctaggttt
    37861 gaccccggcg gctaagcaat tgcaggtgaa tcttacttct tcttatgcag ttttggtgcg
    37921 aatcaggtag tcaaaagcac tcagagaggc tttggcacct tcgccagtgg cgatgatgat
    37981 ctgcttgtac ggaaccgtcg tacagtcacc cgctgcgaat acgcctttga cgttggtttc
    38041 gcatttcgca tcaatgataa tctcacccat gcggttacgt tcgactgcgc cttcgagcca
    38101 gttggtgttc ggcagcagac caatctgcac gaaaataccg gccagttcga tgttgtgaat
    38161 atcgccgctg acacgatctc gatattccag accaacgact ttgctgccgt cgcctttcac
    38221 ttccgtggtt tgcgcattca gaataatgtc gacgtttttc aggctgcgca gtttgtcctg
    38281 cagaacctgg tcggctttca tttctggcgc aaattccagc agcgttacgt gctcaacgat
    38341 acccgccagg tcaattgccg cttccacgcc ggagttaccg ccgccgataa ccgctacgcg
    38401 tttaccttta aacagcgggc cgtcgcagtg cgggcagtag gtcacgcctt tggtgcgata
    38461 ctgatcttcg cccggaacgt tcatgttgcg ccattttgca ccggtcgcca cgataatgct
    38521 gcgtgctttc agtaccgcgc cagaagctgt ttcaatctga tgcagaccac cttcaactgc
    38581 tgctgggatc agtttgctgg cgctctggct gtcgatcaca tcaacgtcgt attcatcaac
    38641 gtgaactttc agtgcgcctg ccagcttctg cccttcagtc ttcggtacag aaatgtagtt
    38701 ttcgatatca acggtatcga ggatctgacc accaaaacgt tcgcccatca gaccggtacg
    38761 gatgccttta cgtgcggagt aaattgctgc cgctgcaccc gccgggccgg aaccgacgat
    38821 taatacgtca taagcatcac gcttgttcag ctcttctgcc gcacgttttt ccgcgcccgt
    38881 atcaattttg gcaacgattt cagtcaacgt catgcggccc tgaccaaact ctttcccgtt
    38941 tacgaacact gccggaacgc ccatcacgtt gcgatcggtg atttcgttct ggaaggtgcc
    39001 gccgtcaatt gcagtgtgct tgatgcgcgg gttcagtacg ctcatcaggt tcagcgcctg
    39061 caccacgtcc gggcagttat ggcaagagag cgagtaatag gtttcgaatt caaaatcacc
    39121 gtcaatatgg cgaatctgct ccagcagaga ctgcgcttct ttcgacggat gaccaccggt
    39181 ccacagcaac gccagtacca gcgaggtgaa ctcgtggccc agcggggagc ctgcaaaacg
    39241 tggcccctgg ttggaaccta ggttggtgat caggaaagac ggcttacgca ccggcaagct
    39301 gttatcttct ttaaaggtga ctttgtctga cagttctgcg atttcagcca acagttcctt
    39361 gatttctgcc gatttagcgc tgtcatccag cgtggcaatt aactcaacag gcttggtcaa
    39421 tttctcaagg taagccttga gttgagtttt catatttgtg tcgagcatgt ttatctcctg
    39481 ggctttaaac atcatcatgc aagcggcctc tacggctacc tggatgcagc ttgcatcata
    39541 gtgcggggaa gaaaatcggg tgccgcagca cccgaagaat taggtgaatt tccgaagtat
    39601 ttcgcgccgg agttggtagc gcgaaagacg aaggaaattt agattttacc aaccaggtcc
    39661 agagacggag ccagagttgc ttcaccttct ttccatttag ccgggcaaac ttcacctggg
    39721 tgagaagcta cgtactgtgc tgctttgatt ttacgcagca ggtcagacgc gtcacggcca
    39781 atgccttcag cggtaacttc gattgcctgg atgataccct gcgggtcaac aacgaaggtc
    39841 gcacggtcag ccagaccttc atcttcacgc atgttgtcga agttacgggt cagggcgcca
    39901 gtcgggtcgc cgatcatcgc atatttgatt ttagcgatgg tttcagagct gctgtgccat
    39961 gctttgtggg tgaagtgagt atcggtagat actgcgtata cgtctacgcc cagtttctgc
    40021 agttcttcgt agtggtcagc aacgtcaccc agttcggtcg ggcatacgaa agtaaagtca
    40081 gccgggtaga agaagaagac gctccagcgg ccttcggtat ctttttcggt gatttcgatg
    40141 aattcgccgt ttttgaatgc ctggttttta aaaggtttaa ttttggtgtt aatcaaggac
    40201 atctatactt cctccgtgtt ttcgatgaga tgtaaggtaa ccaatttttg ccgattcggc
    40261 taatgcgttt ccattatcaa atcgataagt tttaccttac aaccttcgta agacaacttt
    40321 gtgaactttg caccgccagc ggcgataaaa agtaaaatgg ccccctttcc aggtgaccgt
    40381 gtaatctgaa ctaccctttg gtatcttcag cgcctgcctg caggctgagg cgttgccctt
    40441 acaaatgcaa caacgacatg gattacaaca ccctcataaa caaagggcaa tcacctgatc
    40501 taagctctta cctatgacag tgataggtta tgccttttac tcgacttttg cactgactga
    40561 aaaggacaaa ttaatgttaa aaaagatact tttactggct ctgcttcctg caatcgcctt
    40621 cgcagaggaa cttcctgctc cagtaaaagc gattgaaaaa cagggcatta caatcatcaa
    40681 aacgttcgat gcccccggag gaatgaaagg ttatctcgga aagtatcagg atatgggcgt
    40741 caccatctac ctgactccag atggtaagca cgctatctct ggttacatgt acaacgagaa
    40801 aggtgaaaac ctgagtaaca cacttatcga aaaagaaatt tacgcaccag ccggacgcga
    40861 aatgtggcaa cggatggaac aatcccactg gctcctcgac ggtaaaaaag atgcgccggt
    40921 cattgtctac gtcttcgccg atccgttctg cccatattgt aaacagttct ggcagcagg
//
LOCUS       DAJVUK010000014        40520 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.014, whole genome shotgun sequence.
ACCESSION   DAJVUK010000014 DAJVUK010000000
VERSION     DAJVUK010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40520
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.014"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(115..2436)
                     /locus_tag="OQQ57_000759"
     CDS             complement(115..2436)
                     /locus_tag="OQQ57_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HCS1955618.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFITRYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            complement(2533..3009)
                     /gene="greB"
                     /locus_tag="OQQ57_000760"
     CDS             complement(2533..3009)
                     /gene="greB"
                     /locus_tag="OQQ57_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312275.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HCS1955619.1"
                     /translation="MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSE
                     NADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR
                     FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP"
     gene            3237..3956
                     /gene="ompR"
                     /locus_tag="OQQ57_000761"
     CDS             3237..3956
                     /gene="ompR"
                     /locus_tag="OQQ57_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HCS1955620.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            3953..5305
                     /gene="envZ"
                     /locus_tag="OQQ57_000762"
     CDS             3953..5305
                     /gene="envZ"
                     /locus_tag="OQQ57_000762"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HCS1955621.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="OQQ57_000763"
     CDS             complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="OQQ57_000763"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HCS1955622.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
     gene            7382..9106
                     /locus_tag="OQQ57_000764"
     CDS             7382..9106
                     /locus_tag="OQQ57_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HCS1955623.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
                     FGCYLLLMAMLLLPWIQQSLRIRNCSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
                     LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDVTFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
                     NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
                     TLEINLSK"
     gene            complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="OQQ57_000765"
     CDS             complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="OQQ57_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HCS1955624.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQDVEFKCTCSREHCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="OQQ57_000766"
     CDS             complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="OQQ57_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HCS1955625.1"
                     /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="OQQ57_000767"
     CDS             complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="OQQ57_000767"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HCS1955626.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKTSGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
                     PSLM"
     gene            complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="OQQ57_000768"
     CDS             complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="OQQ57_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HCS1955627.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            13744..14304
                     /gene="nudE"
                     /locus_tag="OQQ57_000769"
     CDS             13744..14304
                     /gene="nudE"
                     /locus_tag="OQQ57_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HCS1955628.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="OQQ57_000770"
     CDS             complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="OQQ57_000770"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312265.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HCS1955629.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQGATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            17141..17920
                     /gene="hofM"
                     /locus_tag="OQQ57_000771"
     CDS             17141..17920
                     /gene="hofM"
                     /locus_tag="OQQ57_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HCS1955630.1"
                     /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
                     KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
                     SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
                     ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALFVDPDS
                     VAICGEGGFDPWEAVSVRQPLLPPPGGDFAIALGLALGKAY"
     gene            17920..18459
                     /gene="hofN"
                     /locus_tag="OQQ57_000772"
     CDS             17920..18459
                     /gene="hofN"
                     /locus_tag="OQQ57_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofN"
                     /protein_id="HCS1955631.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLRKQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            18443..18883
                     /gene="hofO"
                     /locus_tag="OQQ57_000773"
     CDS             18443..18883
                     /gene="hofO"
                     /locus_tag="OQQ57_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HCS1955632.1"
                     /translation="MNMFFDWWFATSPRLRQFCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWATLYRLVDTTPFSEEKTLPFSPLDFQLPGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            18873..19277
                     /gene="hofP"
                     /locus_tag="OQQ57_000774"
     CDS             18873..19277
                     /gene="hofP"
                     /locus_tag="OQQ57_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HCS1955633.1"
                     /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
                     GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            19189..20427
                     /gene="hofQ"
                     /locus_tag="OQQ57_000775"
     CDS             19189..20427
                     /gene="hofQ"
                     /locus_tag="OQQ57_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HCS1955634.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGIEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEYERRELVVFITPRLVSSE"
     gene            20828..21349
                     /gene="aroK"
                     /locus_tag="OQQ57_000776"
     CDS             20828..21349
                     /gene="aroK"
                     /locus_tag="OQQ57_000776"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HCS1955635.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            21406..22494
                     /gene="aroB"
                     /locus_tag="OQQ57_000777"
     CDS             21406..22494
                     /gene="aroB"
                     /locus_tag="OQQ57_000777"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HCS1955636.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            22586..23872
                     /gene="damX"
                     /locus_tag="OQQ57_000778"
     CDS             22586..23872
                     /gene="damX"
                     /locus_tag="OQQ57_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HCS1955637.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
                     ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
                     YMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGDKSIDLAGNATDQANGVQPAPG
                     TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
                     VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEP
                     KPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA
                     GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
                     YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            23979..24815
                     /gene="dam"
                     /locus_tag="OQQ57_000779"
     CDS             23979..24815
                     /gene="dam"
                     /locus_tag="OQQ57_000779"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HCS1955638.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            24833..25510
                     /gene="rpe"
                     /locus_tag="OQQ57_000780"
     CDS             24833..25510
                     /gene="rpe"
                     /locus_tag="OQQ57_000780"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HCS1955639.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            25503..26261
                     /gene="gph"
                     /locus_tag="OQQ57_000781"
     CDS             25503..26261
                     /gene="gph"
                     /locus_tag="OQQ57_000781"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HCS1955640.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
                     RVITWIGNGADVLMERALAWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     SEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
                     DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            26254..27258
                     /gene="trpS"
                     /locus_tag="OQQ57_000782"
     CDS             26254..27258
                     /gene="trpS"
                     /locus_tag="OQQ57_000782"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HCS1955641.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
                     "
     gene            27527..28432
                     /locus_tag="OQQ57_000783"
     CDS             27527..28432
                     /locus_tag="OQQ57_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709156.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955642.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE
                     LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            28449..28811
                     /locus_tag="OQQ57_000784"
     CDS             28449..28811
                     /locus_tag="OQQ57_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HCS1955643.1"
                     /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            28895..30058
                     /locus_tag="OQQ57_000785"
     CDS             28895..30058
                     /locus_tag="OQQ57_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
                     /protein_id="HCS1955644.1"
                     /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKR
                     LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQ
                     GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
                     PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
                     DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQSERIA
                     MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
                     SLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPKIVGRYDSLGNSLGA"
     gene            30058..31284
                     /locus_tag="OQQ57_000786"
     CDS             30058..31284
                     /locus_tag="OQQ57_000786"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HCS1955645.1"
                     /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
                     LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
                     PFCDVIDRVEQALVSAGWQVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
                     ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD
                     NGFQVVHMGYGVDKKVQVPQKLYEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMD
                     ITLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVDAMQPDDCLV
                     VMADHGNDPTIGHSHHTREVVPLLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQ
                     NGRSFLSSLRFAGDTL"
     gene            31281..32159
                     /locus_tag="OQQ57_000787"
     CDS             31281..32159
                     /locus_tag="OQQ57_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HCS1955646.1"
                     /translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLGVMRETGINVVACTGYYQDAFFPEHVVTRSVQELA
                     QEMVDEIEQGIDGTELKAGLIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRETPSQFFQ"
     gene            32170..32523
                     /locus_tag="OQQ57_000788"
     CDS             32170..32523
                     /locus_tag="OQQ57_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HCS1955647.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            32535..33839
                     /locus_tag="OQQ57_000789"
     CDS             32535..33839
                     /locus_tag="OQQ57_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfT family protein"
                     /protein_id="HCS1955648.1"
                     /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
                     IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLV
                     AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
                     EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
                     QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
                     EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
                     AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
     gene            33851..34936
                     /locus_tag="OQQ57_000790"
     CDS             33851..34936
                     /locus_tag="OQQ57_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCS1955649.1"
                     /translation="MKTFPLQSLTLIEAQQKQFALVDTICRHFPGAEFLTSGDLGLTP
                     GLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
                     TTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
                     RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA
                     TLYSGGSQIQGAQALEVLRCLVFAPVMHAVQAGVSERLLALLNGGEVPEVKSAVIANA
                     QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE
                     HCAIRINPNRSGEETVLRILRESIASI"
     gene            complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="OQQ57_000791"
     CDS             complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="OQQ57_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417834.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PhoB"
                     /protein_id="HCS1955650.1"
                     /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
                     YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
                     EKVIEQERVSAAPFCKKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
                     YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
                     DKPVHVSELFCRANRITLTIDNKRH"
     gene            complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="OQQ57_000792"
     CDS             complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="OQQ57_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-kinase"
                     /protein_id="HCS1955651.1"
                     /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
                     TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
                     ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
                     DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
                     TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
     gene            complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="OQQ57_000793"
     CDS             complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="OQQ57_000793"
                     /EC_number="5.1.3.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 3-epimerase"
                     /protein_id="HCS1955652.1"
                     /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
                     KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
                     NAGYTLISAAHAGYLTPPNVIWGRLAENLSELYEYAENIGMDLILEPLTPYESNIVCN
                     ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
                     YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER
                     "
     gene            complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="OQQ57_000794"
     CDS             complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="OQQ57_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-phosphate deglycase"
                     /protein_id="HCS1955653.1"
                     /translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
                     DRIYFVACGSPLNAAQAAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
                     GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
                     LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
                     LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
                     AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
                     GGLVEY"
     gene            complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="OQQ57_000795"
     CDS             complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="OQQ57_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417829.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine/psicoselysine transporter"
                     /protein_id="HCS1955654.1"
                     /translation="MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSG
                     IFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS
                     RPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL
                     RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGI
                     SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKL
                     ANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFF
                     KCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWC
                     RKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAF
                     WAKRSRQLNALS"
     gene            complement(40257..40424)
                     /locus_tag="OQQ57_000796"
     CDS             complement(40257..40424)
                     /locus_tag="OQQ57_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HCS1955655.1"
                     /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
                     KIIGGCGPTAQ"
     gene            complement(40450..>40520)
                     /locus_tag="OQQ57_000797"
     CDS             complement(40450..>40520)
                     /locus_tag="OQQ57_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955656.1"
                     /translation="FSKSVELHDKVIGHYLNIKHYQ"
BASE COUNT         9370 a        10278 c        11137 g         9735 t
ORIGIN      
        1 tgtggaataa aaaggccgga gatattctcc ggcactttta tgtcaggcaa ggcgttcgtt
       61 gccagatgcg gcgtgaacgc cttatcgcgc aggtttaggg gccagtccgg gcgtttaacg
      121 ttttttgccc attgccgccg ccagcgcatc catcatcgcg ctattaccgg caggctgcgc
      181 ttcacgaccg cgtggtttgg ctgccgggcg gttgttttgc gggcgttcat taccgccgcc
      241 gcgacgggcg ttggtttcgc caggctgctc gtccagacgc atagtcaggg cgatacgttt
      301 acgctgaaga tccacttcca gcactttcac cttcacaatg tcgcccgctt tcaccacggt
      361 atgcggatct tccacaaact tgttcgacaa tgaagagatg tgaaccaggc cgtcctgatg
      421 cacgccgata tcgacaaacg cgccaaagtt ggtgacgttg gtcaccgcac cttcgaggat
      481 catacccggt tgcaggtcgt tcattgtctc gacgccatcg gcaaactgag cggttttaaa
      541 ttccggacgc ggatcgcgac ccggtttttc cagctctttg atgatgtcag ttactgtcgg
      601 cacaccgaat ttttcatcag taaagtcaga cgctttcagg ttacgcagtt cgctgctgtt
      661 acccatcaga tctttcagtg cctgctgtgt tgctgccaga atgcgttcca ccaccggata
      721 ggcttccggg tggacggtag aagcatccag cgggttatca ccgtggttaa tgcgcaagaa
      781 gcccgcgcac tgctcgaagg ctttcggccc cagacggctg actttcagca gttgctgacg
      841 gttctggaac tggccgttct catcgcgcca ggccacgatg ttttgcgcca tcatgcgcgt
      901 caggcccgcc acgcgggtta acagcggaac agaagcagtg ttgagatcga cgccaacggc
      961 gtttacgcag tcttctacta ctgcgtccag tttgcgggcc agttgcgtct ggctgacgtc
     1021 atgctgatac tgacctacgc cgatagattt cggatcgatt ttcaccagct ccgccagcgg
     1081 atcctgcaaa cggcgggcga tagacaccgc gccacgcagc gaaacgtcga gatccgggaa
     1141 ctcctgcgct gccagctcgg aagctgagta aaccgacgcg ccagcttcgc tgacgatcac
     1201 tttctgtgcg gtcactttcg ggaactgctt ctgcacgtcg agatagaaac gttcagtttc
     1261 gcgggaagct gtaccgttgc cgatcgccac cagttcaacg ttatgttttt cacacaaggc
     1321 agcaacggtc atcgctgctt ttgcggcttg tccggtgtgc gggtaaatgg tatcggtcgc
     1381 taccagtttg ccagtggcat cgaccaccgc cacttttacc ccagtacgca gacccggatc
     1441 gaggcccatc gttgcacgca gtccggcagg ggccgccatc agcagatcgt gcaggttacg
     1501 ggcaaagacg ttgattgctt catcttccgc gcgttcgcgc acggtaccca tcagttcggt
     1561 ttccagatgc atcagcacct tgatgcgcca ggtccagctc actacgcctt tgcgccagct
     1621 atccgccggg gcattgttca ggcgcaggcc aaggtgatcc atgatgattt gctcgcaata
     1681 gctctctttg ggcggctcat cgaactgcgg atcggcattc agcgaaagct ggagtacgcc
     1741 ttcgttacgc ccacggaaca tcgccagagc gcggtgagaa ggcaccgtgg acaacggttc
     1801 gtgatgatcg aaatagtcgc ggaatttcgc cccttcctct tctttaccgc tcaccaccgt
     1861 agaaaccaaa tgcgcgttct tccacagata atcacgcact ttcgccagca gcgcggcatc
     1921 ttcggcaaac cgttccatca ggatatagcg cgcgccatcc agcgcggctt tggtatctgc
     1981 cacgccttta tcggcatcaa catattgtgc agcggcgact tctggcgtgt gtgacggatc
     2041 gctccacagc aggtcagcca acggctcaag ccctgcttca atggcgattt gcccgcgggt
     2101 gcggcgttta ggtttgtagg gcaggtagag gtcttcgagt tcggttttgc ttagggtggc
     2161 gttgatggcc ttcgccagat catcggtgag tttgccttgc tcggaaatgg acttgaggat
     2221 cgcctgacgt ctctcttcca gctcgcgcag atagctcaga cgcgtttcca gattacgcag
     2281 ctgcgtgtca tccagaccgc cggtgatttc cttacgataa cgtgtgataa acggcacggt
     2341 attcccttcg tcaagcaggc gaacggcagc gtcaacctgt tccgggcgcg cctgaatttc
     2401 acccgcaata atgcggcaga acgaatcatt catcatggtt tgagttcatc ttttcggatc
     2461 aaaaatcagg ggatagttat acggactggc tggcaaaaat gccagccatc ggcaggaggt
     2521 taagactctt ccttacggtt tcacgtactc gatagcatta acataccagc tcgcttcccc
     2581 ggcaggggta ttcaccaccg ccagatcgcc gacttctttt ttcagcaatg cgcgggccat
     2641 cggggaatcg atagagatgt aatctttacg gccaaaaatt tcatcgtagc cgacaatacg
     2701 gaaacggtga gtcacgccat cgtcgttttc aatctccacc cacgcgccaa aaaagacttt
     2761 gccttcctgc tgaggggagt aatcgacgat tttgagattt tccatgcatt tagtgagata
     2821 gcgcacgcga cggtcgattt cacgcagacg ctttttatta tactgatagt cagcattttc
     2881 gctgcggtcg cccagacttg cggcccaggt cacctttttt gtgacctccg ggcgttcttc
     2941 acgccagaga taattaagct cttgtttgag tttttcatac ccttcccggg taaccagggg
     3001 cgttttcatc tcgttgattc cctttgtctg tttgataatg cgcacattgg gtataacgtg
     3061 atcatatcaa cagaatcaat aatgtttcgc cgaataaatt gtatacttaa gctgctgttt
     3121 aatatgcttt gtaacaattt aggctgaaat tcataccaga tttagctggt gacgaacgtg
     3181 agctttttta agaatacacg cttacaaatt gttgcgaacc tttgggagta caaacaatgc
     3241 aagagaacta caagattctg gtggtcgatg acgacatgcg cctgcgtgcg ctgctggaac
     3301 gttatctcac cgaacaaggc ttccaggttc gaagcgtcgc taatgcagaa cagatggatc
     3361 gcctgctgac tcgtgaatct ttccatctta tggtactgga tttaatgtta cctggtgaag
     3421 atggcttgtc gatttgccga cgtcttcgta gtcagagcaa cccgatgccg atcattatgg
     3481 tgacggcgaa aggggaagaa gtggaccgta tcgtaggcct ggagattggc gctgacgact
     3541 acattccaaa accgtttaac ccgcgtgaac tgctggcccg tattcgtgcg gtgctgcgtc
     3601 gtcaggcgaa cgaactgcca ggcgcaccgt cacaggaaga ggcggtaatt gctttcggta
     3661 agttcaaact taacctcggt acgcgcgaaa tgttccgcga agatgagccg atgccgctca
     3721 ccagcggtga gtttgcggta ctgaaggcac tggtcagcca tccgcgtgag ccgctctccc
     3781 gcgataagct gatgaacctt gcccgtggtc gtgaatattc cgcaatggaa cgctccatcg
     3841 acgtgcagat ttcgcgtctg cgccgcatgg tagaagaaga tccagcgcat ccgcgttaca
     3901 ttcagaccgt ttggggcctg ggctacgtct ttgtaccgga cggctctaaa gcatgaggcg
     3961 attgcgcttc tcgccacgaa gttcatttgc ccgtacgtta ttgctcatcg tcaccttgct
     4021 gttcgccagc ctggtgacga cttatctggt ggtgctgaac ttcgcgattt tgccgagcct
     4081 ccagcagttt aataaagtcc tcgcgtacga agtgcgtatg ttgatgaccg acaaactgca
     4141 actggaggac ggcacgcagt tggttgtgcc tcccgctttc cgtcgggaga tctaccgtga
     4201 gctggggatc tctctctact ccaacgaggc tgccgaagag gcaggtctgc gttgggcgca
     4261 acactatgaa ttcttaagcc atcagatggc acagcaactg ggcggcccga cggaagtgcg
     4321 cgttgaggtc aacaaaagtt cgcctgtcgt ctggctgaaa acctggctgt cgcccaatat
     4381 ctgggtacgc gtgccgctga ccgaaattca tcagggcgat ttctctccgc tgttccgcta
     4441 tacgctggcg attatgctat tggcgatagg cggggcgtgg ctgtttattc gtatccagaa
     4501 ccgaccgttg gtcgatctcg aacatgctgc tttgcaggtc ggtaaaggga ttattccacc
     4561 gccgctgcgt gaatatggcg cgtccgaggt acgttcggtt acccgcgcct ttaaccatat
     4621 ggcggctggt gttaagcaac tggcggatga ccgcacgctg ctgatggcgg gggtaagtca
     4681 tgacttacgc acgccgctga cgcgtattcg cctggcgacc gagatgatga gcgaacagga
     4741 tggctacctg gccgaatcga tcaataaaga tatcgaagag tgcaacgcca tcattgagca
     4801 gtttatcgac tacctgcgca ccgggcagga gatgccgatg gaaatggcgg atctcaacgc
     4861 agtactcggt gaggttattg ctgccgaaag tggctatgag cgggaaattg aaaccgcgct
     4921 ttaccccggc agcattgaag tgaaaatgca cccgctgtcg atcaaacgcg cggtggcgaa
     4981 tatggtggtc aacgccgccc gttacggcaa tggctggatc aaagtcagca gcgggacgga
     5041 gccgaatcgc gcctggttcc aggtggaaga tgacggtccg ggaattgcgc cggaacaacg
     5101 taagcacctg ttccagccgt ttgtccgcgg cgacagtgca cgcaccatta gcggcacggg
     5161 attagggctg gcaattgtgc agcgtatcgt ggataaccat aacgggatgc tggagcttgg
     5221 caccagcgag cggggcgggc tttccattcg cgcctggctg ccagtgccgg taacgcgggc
     5281 gcagggcacg acaaaagaag ggtaaataaa cgggaggcga aggtgcctcc cgttttgctt
     5341 tctataagat actggataga tattctccag cttcaaatca ttacagtttc ggaccagccg
     5401 ctaccagcgc ggcacccgca ggggtgtcgg tgtatttatc gaagttgtcg ataaacagtt
     5461 tcgccagggt ttcggctttt tcctgccact gttccggaga agcgtaggtg ttacgcggat
     5521 cgagaatctt cgtgtctacg cccggcagtt cggttgggat cgccaggtta aacatcggca
     5581 gagtgaaggt ttctgcatta tccagcgaac cgttgaggat ggcgtcgata atggcgcggg
     5641 tatctttaat cgagatacgt ttgcctgtgc cgttccagcc agtgttaacc agataagcct
     5701 gcgcgcccgc cgcctgcata cgtttcacca gcacttctgc gtactgagtc gggtgcagcg
     5761 acaggaatgc cgcgccgaag caagcggaga aggttggcgt cggttcggtg atgccacgct
     5821 cagtaccggc cagtttggcg gtgaagccag agaggaagtg atactgggtt tgatcggcag
     5881 tcaggcgaga aaccggcggc aacacgccga aagcatcagc agtcaggaag ataaccttag
     5941 tcgcgtggcc cgctttggaa accggcttaa cgatgttatc gatgtgatag attggataag
     6001 aaacgcgggt gttctcggtt tttgaaccat catcaaagtc gatagtgcca tcttcacgca
     6061 cggtgacgtt ttccagcagc gcatcacgac ggatagcgtt gtagatttca ggttccgctt
     6121 ctttcgacag cttgatagtt tttgcgtagc agccgccttc gaaattaaac acgccgtcat
     6181 cgtcccagcc gtgttcgtca tcgccaatca ggcggcgttt cgggtcggtg gaaagggtgg
     6241 ttttaccggt gccggaaagg ccgaagaaca ccgcaacatc gcctttctcg ccaacgttgg
     6301 cggagcagtg catagaagcg atacctttca gcggcagcag gtagttcatc atcgagaaca
     6361 tccctttctt catttcgccg ccgtaccagg tgccgccaat cagctgcatg cgctcggtca
     6421 ggttaaacgc cacgaagttt tcggagttca gaccctgttc tttccactgc gggttagtgc
     6481 acttcgcgcc gttcataacg ataaagtctg gtttgaaacc tgccagctct tcatcgctcg
     6541 ggcgaataaa catgtttttg acaaaatgcg cctgccaggc cacttcggtg atgaaacgga
     6601 cggaaagacg agtatccggg ttcgcaccac agaaagcgtc gacaacgaac agacgtttgc
     6661 cggaaagctg cctggtcacc aggcctttca gatgctgcca ggtttccgga gagagaggtt
     6721 tgttgtcgtt cttacctttg cctttgtctg cccaccagaa agtatcgcga gtggtatcgt
     6781 cacggacgat atacttatct tttggtgaac gaccggtgaa gatcccggta tcgacggcaa
     6841 cggcacccag attagttaac accccgcgct cataacctgt caggctcgga tcgagctctt
     6901 cctgatacag caggtcgtag cttgggttgt aaacgatatc atgtacgtca ctgataccat
     6961 aagcctcgag ttcttgcggg gtcaaaccat tgttaacgcg catttcactg ctccttagcc
     7021 aatatgtatt gcctgaatag taaagtcttt ttgggggtgt taaccgcgac aaggctcata
     7081 gatttacgta tctggagaaa ttcatatttg acaaaaaacc ccgtgattcc tgttacgaaa
     7141 cggttgctat tatcgcagaa atagcatttt aggtgtggaa aatgttctca aaaggttaaa
     7201 tcttggttta tatggcggga atattgtgag tggaatcgca ttccttaatg aaattgatgc
     7261 aaattcaatc ggtaaagtat cgattcacca cgctaacttt ttttgattat tttctgaaaa
     7321 aagcaaaata ctactgcccg gatgcgataa ttaacccacc ttttgattct ggataaccaa
     7381 catggataac gttgaacttt caccggcaac acgctggggg atgattgcta ccggattact
     7441 tcaggggctg gtttgctacc tgttgatcgc ctggcttgcc ggaaaaaatc acagttggat
     7501 tgtttatggc gtgcctgcga ccgttgcgtt ttcatccgtt ttactcttct ccgtgatctc
     7561 ttttaaacag aagcgccttt ggggatggct ggcgctggtg tttattgcca cgacagggat
     7621 gagcggttgg ctgaagtggc aaactgatgg catgaacccc tggagagctg aaaaggcgat
     7681 ttgggatttt ggctgctatc tgctgttgat ggcaatgttg ttgctaccgt ggatacaaca
     7741 aagccttcgt atccgcaatt gcagtagccg ctatagctac ttttaccagt cagtatggca
     7801 taacgtactt atattactgg tgatttttct cgccaatggc ctgacgtggc tggtgctttt
     7861 actgtggggt gagttgttta aacttgttgg catcaagttt ttcaatacgc tcttttttgc
     7921 aaccgactgg tttatgtatc ttacattagg tctggttacc gcactggcgg tgattctcgc
     7981 gcgcacacag tcacgtttaa tcgactctat tcaaaagttg ttcacgttaa tcgccacggg
     8041 gttgctgccg ttagtatcat tgctaaccct gatgtttatc atcactctgc cgtttacggg
     8101 cctgagcgcg atttctcgcc acatctccgc cgccgggttg ctgttaacgc tggccttttt
     8161 gcaattgatc ttaatggcta ttgtccgcga tccgcaaaaa gcgtcacttc cctggacggg
     8221 gccgttgcgt tgcctgatta aaaccgcttt gctggttgct ccgctgtatg tgttcgtcgc
     8281 cgcctgggcg ttatggctgc gggtcgctca gtacggctgg actgtcgacc gcttgcaggg
     8341 cgcgctggcg gtgctggtgt tactggtgtg gtcgctgggg tattttgtca gtatcgtctg
     8401 gcgtaatggg caaaatcccc ttgttcttca gggcaaagtg aaccttgcgg tttcgttatt
     8461 ggtgttggtg atactggtgc ttcttaattc gccggtgctg gacagtatgc gtattagcgt
     8521 gaacagtcat atggcgcgtt atcagagcgg caaaaacacg ccagaccagg taactatcta
     8581 catgctcgaa cagagcggtc gctatggacg tgcggcgctt gagtcgctga aaagcgatgc
     8641 cgggtttatg aaagacccga aacgcgcgcg ggatctgctg atggcgttag atggagagca
     8701 acatcttcag gaacaggtat cggaaaaagt attagccgaa aatgtgttaa ttgcccctgg
     8761 ttctgttaaa ccggatgtga cattctggtc ggccttaatc caggatcgct ataacgtgat
     8821 gacctgtatt gaaaaagacg cctgcgtcct ggtcgagcaa gatctgaata gtgatggtca
     8881 ggcggagcgg atcctgtttg cttttaatga tgacagagtc attgtctatg gctttgactc
     8941 agacagaaaa gaatgggacg cgcttgatat gagtttactt ccgaacgaaa taacgaaaga
     9001 aaaattactc acagctgcga aggatggaaa actggggacg aggccgaaag cgtggcgcga
     9061 tctgacggta gatggtgaaa cgctggaaat aaacttaagt aagtgacaac gcttttatcg
     9121 gatacgacgc tgtatctgac caaaataatt tgcgatttat ttcataggcg ctggtaagcg
     9181 cagcacatca ggccattaag ttgtaaaatc cggcagagcc ctctctgccg gacatactca
     9241 ttaatgaact tgcggatctg ccggagacgc gttgttgcgg atttcagcaa tatccatcgc
     9301 attgaacaga tagtggttac cgcagtaatc acaatgcatg tcaatttcgc catcttccgc
     9361 caggatgcta tcaacttctt catcaggcag cgttttcagc gcatcggcgc aatgttcacg
     9421 cgagcaggtg catttgaact ccacatcctg cggatcgtaa accgtcacct cttcttcgtg
     9481 atacaaacgc cacaacactt cgtttgccgg taaggtcagc agttcttcgg ttttgatggt
     9541 ttcggttagc gtcgccaggt ggtcaaagtc gtcctgctgg gcattttgcg caggcattac
     9601 ctgcaacaac ataccgcctg cagccggttt gccgtctacg tcgccggtgc gaataaacag
     9661 gcgcgtcggc agctgttcag aacgcataaa gtaatcttcc aggcaggccg ccagggtatc
     9721 accttccaga ccaactacgc cctgatagcg ttcgccttcg ctcggggtaa tggtgatcac
     9781 cacgtaacca ttgccgacca gcgttttcag gtcggcattt tctggaattt cgccctgcac
     9841 gcgcgccaca ccgcgcattt gctggttatt gttaccgtta ataaccgcca gattcatcgg
     9901 accgtcgccc tgcagctgta cggtgatatc accatcaaac ttcagcgtag cggttaacag
     9961 gctggtcgca accagcagtt ctgccagcac gtttttaacg ggctgcggat aatcgtggtt
    10021 ctcaaggatc tgttgcaggg tttccgaaac ggttaccagt tcgccgcgaa cggcaaaatt
    10081 ttcaaacaga tagcgatgta attggtcatg ttgcggcata atcatctctc ttgcaggtga
    10141 cagttattca ctgtcgccgt gtttaaatcg taacaggtcg cggcgctctt ttttgtccgg
    10201 gcgtcggtcc gggtgcggca tggttaaggc attaagttta cgtgccatcg ccattttttc
    10261 gcgtttctct acactttccg cagtctcttc atacagcaag gctgcctcgc tggcggggcg
    10321 acgctgttca gtaatcgcct ttacaatcac cgtgcgttcg tcatttccct ggcgcagagt
    10381 gagcgtggca ttcagctcga cgattttgct cggcttgctg cgctgcccgt tgtaatgcac
    10441 cttaccgcct tcaatcattt cacgggccag cgcgcgggtt ttataaaaac gggcagccca
    10501 tagccattta tccagtcgaa cctcaacagc aggtttctct ttcatggcgt ctccttcaca
    10561 ttagcgaggg gatcaggcgg cggtagtcat tcagtgacgg atggcgttga tactgtttct
    10621 cggcaatccc ggaatcagga ttagtcacgc cgaggcagta acgaatacca aattgcgcgg
    10681 cagcatcgag aatcgcttcg ctgtcatcaa taaacagcgt tctttcagct ttcagacccg
    10741 tagcttcggc caccgcatgc cataaccgct gatcctcttt cggataacca aatgtgtggg
    10801 tggaaagtaa taaatcaagg tgtgcgtcca gacccgtatg ctcaagtttt accgccaggt
    10861 tgtgcggatg agcattggtg agcaaaattc gctgcttacc gctggttttc agtgcctcaa
    10921 gaaacggaat ggtatcttca cgcagtacgg cgcgcggtcc catctcggtg gtcattgcac
    10981 agatatccag acccagttgc tcactccagt aatcaagaca gtaccagttt agcgtatgct
    11041 gtacgtcgtg atattgctgg cgcatatatt ccatcgcttc ctgtggcgta accccgtttt
    11101 tcgcgcccca tgtttcaggc accagctttt gccagaaata gttatcgaag gcgaggtcga
    11161 gcaacgtgcc gtccatatcc agcagaacgg tatctacgtc ctgccaggca atgttgatat
    11221 gcatgaggga aatctccaga gtgaagcaat ttgcgcgaca gggtagcata acctgtcgcg
    11281 caaacgtgtt attcgataag gctttctgaa ggggtgatca gttgcgggtt caggcagctt
    11341 tcataatagg cctgaatctc catcatgcga gtgcgatgac gctggtaacg acgccaggcc
    11401 tgtacgccat tgtaaatggc gctacccagc atcgtcagta gcagcaatgt ggtgctgaga
    11461 tagcgccaca ggccggaacg atccgggatc ggatgaaggc caatatgctg cgtaccattg
    11521 gcgtcagtga agatttttgt gacgatacct tcggcgttaa acggcgtatg catcagcatt
    11581 tgtgccagtt tctggaaagc gttccactgt tcttgcggcg ggtagtcgta aagtgatgcc
    11641 gaaggccagg gctgatcaac aaaatcgctg ccttcgtcgc tgacaatcag gaatccgccg
    11701 ggggccggac tgtttagtga ttgtgccgct cgcgccgttt catgcgtgat aaacggcgcg
    11761 gtggaggttg ccaccaggtt atccagcgat tccgcactca ccgggcgtaa taacacattc
    11821 acgccatcga gcttcccggc gttggcgcgt tttaccagcg cgtcccagtc tttactgttg
    11881 ccgagattga ccagcgcatt tttcagtcgc acacagtcat ctttggcaga acataaatcc
    11941 gctgtcttca gtacaatgtc gccaaaatca tcaagcaata ccatgccgga tttttgaatc
    12001 gctgaacgta atgaggcact gacgcgagat tcatcttccg gtttagggtg cagctggcga
    12061 ttaactgctt cagtcaatgc cgtcgctttg ttgaccagtt cagattctgg taatggtaat
    12121 gagcgggcgt cattccagat gatctgcgag cagtcaaacg gtaaaaaagg tgaattggtt
    12181 ttcgcgctcc aggttccgga agtgcgaata ttacacattc ccgtaccgct aatacgcaat
    12241 gtatcgccta cccgcacgcc agcgtcagcc agttgtttta cgctggtggc ttcaatggtc
    12301 tgcgcgcctt tcatccatga gagagtgaat ttcagcggca tatccagcgg gatccagaat
    12361 aacagcataa acagcaccag cagcgagccc gcagcgataa tcgtactgcg cagccagtgc
    12421 tgtaacggaa agttttttac ttcatcatgc agcgaaagat atcgcccctg acgcactacg
    12481 tggcagtcga gatagatatc aatatcggtt tgttgatcga gatcctgagc aatgtatggc
    12541 tgccagtgtg cgggatagac caggtcgata ataccgagtg aaatattgtt gatctgttcc
    12601 tgatcgtttt cgccaaacaa tccccaacga cggggtgtac cgcgcagaca atgaatttcc
    12661 cgcagggagg attttgccgg gggcgcgaat agcccccaca gacctgcgcc cagcagcagt
    12721 aatgcgccgc ctgccagcca cggaacaaat acatccgggg taatcaggca gaaaaagaac
    12781 atcaggaagg aggcgacgat cagcaacgct tcacgcagcc cgcgcggacg actcagcgca
    12841 tattcttcat gcgtttcttt gcgaatattg agtagctcga tttgctcact ctcttccccg
    12901 cgaatcgacg cctgcgtgga cggaacaggt tgcaaggcat agccgcgcgt ttcctgcatg
    12961 tactcctgta gcgtatgacc gttgagtgaa ataaccaacg gcagcgaatc ggtatgaatc
    13021 agttcaacgg tattctcatc gttgatgtac tgttcccaga aggggggcag gtggacttct
    13081 accgaatcga ggtagtaacg ccatttattc ggatcgtcgg tagagatgcc gtaacgtgtg
    13141 atagcgtgtg tcagcatcat gacgttgttg ctttcggcat tcagcgccag agagatcggt
    13201 gccgcgctag ctcccgttgg gccaggcacc tgtaatacct gcgtcaggct ctcaagataa
    13261 ttttcaacgg cgctacgttc ttcaggtgtg agtttacgcg tttgcgcatc cgcgaaggcg
    13321 ttggtccagg gcagctgact ccgtctggat cgcactttta tcagccatcc cgcaagtagt
    13381 gagcaggcca gcaaagcagc taaaaaaatc acaatggtgc tcatgctttc cccatcttac
    13441 ttagtctgtc aggcgtggtc agtcgcacca gacacaatac atgattctgc ggttggctat
    13501 cggcaagcgt ggagtttaac ttgagcatca ttaagcacat cacagtaacc gctgatcata
    13561 gcaaaccctc tgaaggcgga atatcagcaa attcctagag ttatttcaac ctattgactt
    13621 ttaatttgat ttgaggacga ttatttatta agttacataa atgtaaataa catgcaattc
    13681 acattgccga aagcgtgtcc gatatcgcac aataaccgct gatttcacag catagatccc
    13741 acgatgagca aatcattaca aaaacccacc attctgaatg ttgaaactgt agcccgttcc
    13801 cgactgttta ccgtcgagag cgtggatctg gagttcagca atggcgtgcg gcgtgtttat
    13861 gaacgaatgc gtccaaccaa ccgggaagca gtgatgattg tgccgattgt ggacgatcac
    13921 ctgatcctga tccgcgaata cgcagtggga actgaatcct acgaattagg tttttcgaaa
    13981 ggattaattg atccgggtga aagcgtctac gaagccgcta accgcgagct aaaagaagag
    14041 gttggatttg gtgcgaacga tctgactttt ttgaagaagc tcagcatggc accgtcttac
    14101 ttttccagca aaatgaatat cgtggtcgcg caagatctct acccggaatc gctggaaggc
    14161 gatgagccag agccgctacc acaggtgcgc tggccgctgg cgcatatgat ggatttgctg
    14221 gaagaccctg acttcaacga agcgcgtaat gtcagcgcgc tgttcctcgt gcgcgaatgg
    14281 ttgaaagggc aggggcgagt gtaaatgcgt gaagtttgcc tgatgcacaa cgcttatcag
    14341 gcttatgggg ttcctgcaat atattgattt ttcacgattt tgttagccgg gtaacgcggt
    14401 cacccgcatc cagcataaac aaatgcactt tgtcagccaa ctgaaaaggc gccgaagcgc
    14461 ctttttaatc agaacaattc ctgtgcctca ccattatcga taatggtcgt tcccacctcg
    14521 tgcaccgcct gttgtgtcgg ctgcgtacct tcgatgaaat actcttcgcg gctgttgcca
    14581 ccattagcta actgcccggt gctgcgatcg atattcaccg tcacaatacc cggtggcggc
    14641 gtcagcggct gctccggcac accttcaaga acggctttca tataagcgtc ccatgcaggc
    14701 tgggcactct tggctccgcc ttcgtaacct gagatctgat ctttaatcgc tccggaagcc
    14761 gttgtatgac cgagattacg acggtgatca tcaaagccaa tccagaccga ggtcacaacg
    14821 cccggaccgt aacccgagaa ccacgcatct ttcgaactgt tagtggtacc ggttttcccg
    14881 ccgatatcgc gacgctgcaa atcacgacct gcacgccagc cagtaccctg ccagcctggc
    14941 tcaccaaaga tattggtgtt caaagcactc ttaatcagga atgccagcgg agtgttgatg
    15001 acgtgcggtg cgtactcctg cgcgccagtc ttcgccacta acgcctgatt tgcctgctcc
    15061 agctgcggca ttggtacaga aacattctgc tgctcgcggg agatagcgac atcttcaaca
    15121 tcgttatttt ccagcacgtt cgatttctgc gtatcaccgt aaatcaccgg aatatcgcat
    15181 tccgggcagg ctactttcgg tttcgcttcg aaaatcacgc cgccctgatc gttttcaatt
    15241 ttgctgataa accacgggtc caccaggaag ccgccgttcg ccatgaccgc gtagccgcgc
    15301 gccacctgca ttggggtgaa ggacgctgaa cccagcgcca gcgattcggt gtggacaatg
    15361 ttttgcgccg ggaagccgaa gcgttgcaga tattctgcag cgtagtcgac gcccatagcc
    15421 cgcattgcac gtaccatcac cacgtttttc gactgaccca gcccctgacg taagcgaatt
    15481 ggaccagcat attgtggcgg cgagtttttc ggctgccagt cagaaccggc acctgcgtcc
    15541 cagcgagaaa ttggcacatc gttcaacata cttgccagcg tcagaccttt atccatcgcc
    15601 gcggtgtaga ggaacggttt gatgttggaa cccacctgac gcagtgcctg ggtggcgcgg
    15661 ttaaacttgc tctgattgaa atcaaagcca ccgaccagcg ccataacggc accgttttgc
    15721 ggattgatcg acaccagcgc cgagttcact tccggcactt gtgccagcca ccatgcatcg
    15781 ccaacctgac gaacccagat ttgctgaccc gtttgcagaa catcggtcac tttacgcggc
    15841 gtcggtccct gctgagtatc cgaacggtaa ggacgcgccc agcgaacgcc ttccatactc
    15901 aatgcgacgg tcgacccgtc cgccagcatc gccgtcgctc cctgaggatt ggcgctggtg
    15961 actgcggcag gcagcagcgg accataggtc ggcagcgcct tcagcgtatc ggtaatcttg
    16021 ttgttatccc acgccgactc gcccactttc cacagcacat ttgccgggcc gcgatagccg
    16081 tggcgcatgt cgtagtccag cacgttatta cgtaccgcct gctgtgcggc ctgctgcact
    16141 ttgcgggtga tggtggtgta aatgcgataa ccgtcttcat aggcactttc gccataacgg
    16201 ttatacatct cctggcgcac catttcgctc aggtacggcg cagagaaagc aatctccggc
    16261 gcgtgatagt tagcgttaat cgcctcagtg cgtgtctgat cgaactgttg ttgggtgata
    16321 tacccttcat ccagcatccg cgacagtacg acgttacgcc gcgcgacggc acgatccatt
    16381 gagtagagcg gattaaaggt ggaaggcgct ttcggcagcc cggctatcac agccatttcg
    16441 ttcagcgtca gttggtcgac cgttttaccg aaatagactt gtgccgcagc accgacacca
    16501 taggcgcggt aaccgaggta aatcttattc agataaagct cgaggatctc gtctttcgtc
    16561 agcaactgtt caatgcgaat cgcgaggaag acttccttaa tcttacgcat cagcgtgcgt
    16621 tctggactga ggaagaagtt tctcgccagc tgctgggtaa tggtactcgc cccttgtgac
    16681 gcgtggccgg agaacagcgc cacacttgcc gcacggaaga tccccaccgg gtcaacgccg
    16741 tgatgctcgt agaagcggct gtcttccgtc gcgataaagg ctttcaccat ctccggcggg
    16801 atttgatcca acgtaaccgg aatacgacgt ttctcaccgt attgagcaat cagctcgcca
    16861 tcggcgctgt aaatctgcat cggaatttgc aggcgaacat cttttaatgt cgccacatcc
    16921 ggcagttgtg gctcgatgta gcggtatagg ccataaatcg agcctgctcc cagcagaatg
    16981 caacagactg caaggatcaa aaaatacttt acgaacttca ctggaaattt cccatttagt
    17041 ttcatttggg cagtttataa acaaacgcgc ggtagtataa aggcaagcca gacgcattga
    17101 tatacccgtc agagtgacgg gtgataagga gatcatcaca atggcattta agatctggca
    17161 aattggtttg catttacaac agcaagaagc ggtagcggtt gcgatcgtgc ggggcgcaaa
    17221 agaatgcttt ttgcaacgct ggtggcggtt gccgctggag aacgacatta tcaaagatgg
    17281 gcggattgtt gatgcgcagc agctggctaa aacgttgtta ccttggagtc gcgaactgcc
    17341 gcagcgtcat cacattatgt tggcgtttcc cgccagtcgc acattacagc ggtcatttcc
    17401 gcgcccgtcg atgtcccttg gtgagcggga gcaaacggcc tggctgtcag ggacgatggc
    17461 ccgcgagctg gatatggatc cggactccct gcgcttcgat tacagcgaag actcactcag
    17521 tcccgcctat aacgtgactg ccgcgcaaag caaagagctg gcaacgctgc ttactctggc
    17581 agaaaggttg cgtgttcatg ttagtgcgat caccccggat gccagtgcat tacagcgatt
    17641 cctgcctttt ttaccttctc atcagcaatg tctggcctgg cgtgataacg aacagtggct
    17701 gtgggcgacg cgctatagct gggggcgcaa actggcggtg gggatgacta gcgcgaagga
    17761 gctggcggca gcgttattcg ttgatcccga cagcgtcgcg atatgtggcg aaggcggatt
    17821 tgacccctgg gaggccgttt ctgttcgtca gccgctgcta ccgccgcctg gtggagactt
    17881 tgccatcgcg ctggggctgg cgcttgggaa ggcgtactga tgaacccgcc aattaatttt
    17941 ttgccctggc gacagcaacg ccggaccgct tttctgcgtt tctggttgct gatgttcgtt
    18001 gcgcctctgc tgctggccgt cgggataacg ctaatactgc gtctgacagg cagcgccgaa
    18061 gcgcgcatag acgcagtttt gcttcaggcg gaacaacaac tcgcccgcag cttacagata
    18121 acgaagccac gtttgctgga gcaacagcag ttacgcaaac agcgttcgca acggcagcgc
    18181 cagcgacaat ttacccgcga ctggcaatct gcgctggaag cactggcggc gcttttaccc
    18241 gagcacgcct ggctgacaac gataagctgg cagcagggaa cgctggagat caaggggctg
    18301 acaacaagca ttaccgcgtt aaacgcacta gaaacgtcac tccgccagga tgcgtctttt
    18361 catctcaatc agcggggagc cacgcagcag gatgcgcagg gacgctggca atttgagtat
    18421 cagttaacaa ggaaggttag cgatgaacat gttctttgac tggtggttcg ccacatcacc
    18481 ccgcctccgc cagttttgct gggcattctg gttgctgatg ttagttacgc tcatttttct
    18541 gtcatcgaca caccatgaag agcgcgacgc attaattcga ttacgggcaa gtcatcacca
    18601 gcagtgggcc acactgtatc gcctggttga caccactccc ttcagcgaag aaaaaacgct
    18661 gcccttttcg ccactggatt ttcagttgcc cggcgcgcaa ctggtttcct ggcatccatc
    18721 cgcgcaggga ggtgagttgg cgttgaaaac gctgtgggaa gcagtgccgt cggcattcac
    18781 acggctggca gagcgcaacg tcagcgtgag ccgtttttcg ttaagcgtgg aaggtgatga
    18841 tcttttgttc acgctacaac tggagacgcc gcatgagggt taaacgctgg ttgttggcag
    18901 gtattgcatt gtgcctttta accggtatgc gtgacccttt taaaccgccg gaagatctat
    18961 gccggattag cgaacttagc cagtggcgct atcaggggat ggtagggcga ggcgagcgca
    19021 tcatcggtgt aataaaagac gggcaaaaga aatggcgacg ggtgcagcaa aacgatgtgc
    19081 tggaaaacgg ctggacaatt ttacagctga cgccagacgt actaacgctg ggtaccggga
    19141 caaactgcga accgccacaa tggttgtggc aacggcaagg agatacaaat gaagcaatgg
    19201 atagccgcac tactgttgat gctgataccc ggcgtacagg cggcaaagcc gcaaaaagtg
    19261 acgctgatgg tggatgacgt tccggtagct caggtgttgc aggcgctggc tgaacaggag
    19321 aagttgaacc tggtcgtgtc gccagacgtc agcggtacgg tgtcgttaca tctaacagat
    19381 gttccctgga agcaggcact acaaactgta gtgaaaagcg ccggactgat aacgcggcag
    19441 gaaggcaaca ttctctcagt gcattccatt gcctggcaga ataacaatat cgcccgccag
    19501 gaggcggagc aggcgcgggc gcaggcaaat ctgccgctgg aaaatcgcag tataaccctg
    19561 caatacgccg acgcgggaga actggcgaaa gcgggggaga agctactgag tgccaaaggg
    19621 agtatgaccg tcgataaacg caccaatcgc cttttgctac gagataacaa aacggcgtta
    19681 agcgcgcttg aacagtgggt agcgcaaatg gatctgccgg tcgggcaggt tgagctgtcg
    19741 gcgcatattg tcaccattaa tgaaaaaagt ttgcgtgagt taggcgtgaa atggacgctg
    19801 gccgatgcgc aacacgctgg tggcgttggg caagtcacca cgcttggtag cgacctctcc
    19861 gtagcgacgg cgacaacgca tgtcggtttt aacattgggc gcatcaacgg acgcttgctg
    19921 gatcttgagc tttccgcgct cgaacaaaaa cagcagctgg atattatcgc cagtccgcgt
    19981 ctgctggcct cacatcttca gcctgccagc attaaacagg ggagcgaaat tccatatcag
    20041 gtttccagcg gggaaagtgg cgcgacgtcg gtggaattta aagaggccgt cctggggata
    20101 gaggtcacgc ccacggtgtt acaaaaaggt cgcatccggc tgaaattaca catcagccag
    20161 aacgttccgg ggcaggtgct acagcaggcc gatggcgaag tgctggcgat tgataagcag
    20221 gagatcgaaa cgcaggtcga ggtcaaaagc ggagaaacgt tggcgctggg cggcattttt
    20281 acccgtaaaa ataaatcggg tcaggatagc gtaccgttgc ttggcgacat tccctggttc
    20341 gggcaattat ttcgtcatga cggaaaagaa tatgaacgac gcgagttagt ggtgtttatc
    20401 acgccacgac tggtttccag tgagtaaaca gccgtaaaag cggtaatgtt tttatgctga
    20461 acgtgtttca tctatttgac gcgcgcaggt atttagcata caaggagtac cgatttgaga
    20521 gttggcgctc ttcgctgcct gcgttccatg atgatgattt atcattcagg cggcattttg
    20581 ctgtcttttt tacgctaatc ttacccggtg atttatcgcc agagcggtgg tagcaaggca
    20641 gcgcgcttgc agcgaccaga tatgcagagg gatgggtgat ttattcagtt gccaaacccg
    20701 ctggagtatt gagataattt tcagtctgac tctcgcaata tcttatgagg tttcagttca
    20761 tgtcctgcgg cgctctctga gcgaagcggg tttatcatta acgaatagtc ttagtagtac
    20821 cgaaaaaatg gcagagaaac gcaatatctt tctggttggg cctatgggtg ccggaaaaag
    20881 cactattggg cgccagttag ctcaacaact caatatggaa ttttacgatt ccgatcaaga
    20941 gattgagaaa cgaaccggag ctgatgtggg ctgggttttc gatttagaag gcgaagaagg
    21001 cttccgcgat cgcgaagaaa aggtcatcaa tgagttgacc gagaaacagg gtattgtgct
    21061 ggctactggc ggcggctctg tgaaatcccg tgaaacgcgt aaccgtcttt ccgctcgtgg
    21121 cgttgtcgtt tatcttgaaa cgaccatcga aaagcaactt gcacgcacgc agcgtgataa
    21181 aaaacgcccg ttgctgcacg ttgaaacacc gccgcgtgaa gttctggaag cgttggccaa
    21241 tgaacgcaat ccgctgtatg aagagattgc cgacgtgacc attcgtactg atgatcaaag
    21301 cgctaaagtg gttgcaaacc agattattca catgctggaa agcaactaat tctggcttta
    21361 tatacactcg tctgcgggta cagtaattaa ggtggatgtc gcgttatgga gaggattgtc
    21421 gttactctcg gggaacgtag ttacccaatt accatcgcat ctggtttgtt taatgaacca
    21481 gcttcattct taccgctgaa atcgggcgag caggtcatgt tggtcaccaa cgaaaccctg
    21541 gctcctctgt atctcgataa ggtccgcggc gtacttgaac aggcgggtgt taacgtcgat
    21601 agcgttatcc tccctgacgg cgagcagtat aaaagcctgg ctgtactcga taccgtcttt
    21661 acggcgttgt tacaaaagcc gcatggtcgc gatactacgc tggtggcgct tggcggcggc
    21721 gtagtgggcg atctgaccgg cttcgcggcg gcgagttatc agcgcggtgt tcgtttcatt
    21781 caagtcccga cgacgttact gtcgcaggtc gattcctccg ttggcggcaa aactgcggtc
    21841 aaccatcccc tcggtaaaaa catgattggc gcgttctacc agcctgcttc agtggtggtg
    21901 gatctcgact gtctgaaaac gcttcccccg cgtgagttag cgtcggggct ggcagaagtc
    21961 atcaaatacg gcattattct tgacggtgcg ttttttaact ggctggaaga gaatctggat
    22021 gcgttgttgc gtctggacgg tccggcaatg gcgtactgta ttcgccgttg ttgtgaactg
    22081 aaggcagaag ttgtcgccgc cgacgagcgc gaaaccgggt tacgtgcttt actgaatctg
    22141 ggacacacct ttggtcatgc cattgaagct gaaatggggt atggcaattg gttacatggt
    22201 gaagcggtcg ctgcgggtat ggtgatggcg gcgcggacgt cggaacgtct cgggcagttt
    22261 agttctgccg aaacgcagcg tattataacc ctgctcaagc gggctgggtt accggtcaat
    22321 gggccgcgcg aaatgtccgc gcaggcgtat ttaccgcata tgctgcgtga caagaaagtc
    22381 cttgcgggag agatacgctt aattcttccg ttggcaattg gtaagagtga agttcgcagc
    22441 ggcgtttcgc acgagcttgt tcttaacgcc attgccgatt gtcaatcagc gtaacaacaa
    22501 gaaaggtcag gccgcttatc aagcggtcta ttagcttcag gttaattgca acgtggtaag
    22561 cattaacctt ttagtggggt gttaaatgga tgaattcaaa ccagaagacg agctgaaacc
    22621 cgatcccagc gatcgtcgta ctggtcgttc tcgtcaatct tctgaacgtt ctgagcgtac
    22681 tgaacgtggc gaaccgcaga tcaattttga tgatattgaa cttgatgaca ctgacgatcg
    22741 ccgtccgact cgtgcgcaaa aagagcgcaa tgaggaaccg gaaatcgaag aagaaattga
    22801 cgaatccgaa gatgaaaccg tggatgaaga gcgcgtagag cgtcgtccgc gtaagcgcaa
    22861 aaaagcagcc agtaaacccg cttctcgtca gtatatgatg atgggcgtcg gcattctggt
    22921 tctactgctg ttgatcatcg gtatcggttc tgcgctaaaa gccccctcga cctcttccag
    22981 cgatcaaacc gcgtctggcg ataagagtat tgatcttgca ggcaatgcga ccgatcaggc
    23041 gaatggggtg cagccagcgc cgggaaccac gtctgcggaa aatactcagc aggatgtttc
    23101 tctgccaccg atctcttcta cgccgactca agggcaaacc ccggcggcaa cggatggtca
    23161 acaacgtgtt gaagtgcagg gtgacctgaa caatgcgctg actcagccac aaaatcagca
    23221 acagttgaac aatgtggcgg tcaattccac attgccgacc gaacccgcga ctgtcgcgcc
    23281 tgttcgcaat ggcaatgcat cgcgtgacac ggcgaaaacg caaaccgctg aacgtccgtc
    23341 cactacgcgc ccagctcgtc agcaggcggt gattgaaccg aaaaaaccgc aagcaaccgt
    23401 gaaaacggag ccgaagccgg tagcacagac gccgaagcgt actgaaccag ctgcccctgt
    23461 ggcgagcacg aaggcaccgg ctgcgacttc tacgccagca ccaaaagaga cggcgactac
    23521 ggctccagta cagacggcat ccccggcgca aaccacggca acaccagccg ctggagggaa
    23581 gaccgcaggt aatgttggtt cgttgaaatc ggcaccgtcc agccattaca ctctgcagct
    23641 gagcagttcc tctaactacg acaacctgaa cggttgggcg aagaaagaga atctgaaaaa
    23701 ctacgttgtc tatgaaacga cgcgtaatgg tcagccgtgg tatgtcctgg tttctggcgt
    23761 gtacgcttcg aaagaagagg cgaaaaaagc ggtatctaca ttgccagcag atgttcaggc
    23821 caaaaacccg tgggcgaaac cgctgcgtca ggtacaggcc gatctgaagt aatcaaggtt
    23881 atctcccgca atggtttatc gttgcgggag ctgcctgaag cgctggatgc tgtcggagct
    23941 ttctccacag ccggagaagg tgtaattagt tagtcagcat gaagaaaaat cgcgcttttt
    24001 tgaagtgggc agggggcaag tatcccctgc ttgatgatat taaacggcat ttgcccaagg
    24061 gcgaatgtct ggttgagcct tttgtaggtg ccgggtcggt gtttctcaac accgactttt
    24121 ctcgttatat ccttgccgat atcaatagcg acctgatcag tctctataac attgtgaaga
    24181 tgcgtactga tgagtacgta caggccgcac gcgagctgtt tgttcccgaa acaaattgcg
    24241 ccgaggttta ctatcagttc cgcgaagagt tcaacaaaag ccaggatccg ttccgtcggg
    24301 cggtactgtt tttatatttg aaccgctacg gttacaacgg cctgtgtcgt tacaatctgc
    24361 gcggtgagtt taacgtgccg tttggccgct acaaaaaacc ctatttcccg gaagcagagt
    24421 tgtatcactt cgctgaaaaa gcgcagaatg cctttttcta ttgtgagtct tacgccgata
    24481 gcatggcgcg cgcagatgat gcatccgtcg tctattgcga tccgccttat gcaccgctgt
    24541 ctgcgaccgc caactttacg gcgtatcaca caaacagttt tacgcttgaa caacaagcgc
    24601 atctggcgga gatcgccgaa ggtctggttg agcgccatat tccagtgctg atctccaatc
    24661 acgatacgat gttaacgcgt gagtggtatc agcgcgcaaa attgcatgtc gtcaaagttc
    24721 gacgcagtat aagcagcaac ggcggcacac gtaaaaaggt ggacgaactg ctggctttgt
    24781 acaaaccagg agtcgtttca cccgcgaaaa aataattctc aaggagaagc ggatgaaaca
    24841 gtatttgatt gccccctcaa ttctgtcggc tgattttgcc cgcctgggtg aagataccgc
    24901 aaaagccctg gcagctggcg ctgatgtcgt gcattttgac gtcatggata accactatgt
    24961 tcccaatctg acgattgggc caatggtgct gaaatccttg cgtaactatg gcattaccgc
    25021 ccctatcgat gtacatctga tggtgaaacc cgtcgatcgc attgtgcctg atttcgctgc
    25081 cgctggtgcc agcatcatta cctttcatcc agaagcctcc gagcatgttg accgcacgct
    25141 gcaactgatt aaagaaaatg gctgtaaagc gggtctggta tttaacccgg cgacacctct
    25201 gagctatctg gattacgtga tggataagct ggatgtgatc ctgctgatgt ctgttaaccc
    25261 aggttttggc ggtcagtcgt tcattccaca aacactggat aaactgcgcg aagtacgtcg
    25321 tcgtatcgac gagtctggtt ttgacattcg actggaagtg gacggtggcg tgaaggtgaa
    25381 caacattggc gaaatcgctg cggcgggcgc ggatatgttc gtcgccggtt cggcaatctt
    25441 cgaccagcca gactacaaaa aagtcattga tgaaatgcgc agtgaactgg caaaggtaag
    25501 tcatgaataa gtttgaagat attcgcggcg tcgcttttga tctcgacggt acgctggttg
    25561 acagtgctcc cggtcttgct gctgcggtag atatggcgct gtatgcgctg gagttacccg
    25621 tcgcaggtga agaacgcgtt attacctgga ttggtaacgg cgcagatgtt ctgatggagc
    25681 gtgcattggc ctgggcgcgt caggaacgtg cgactctgcg taaaacaatg ggtaaaccgc
    25741 ccgttgatga cgacattccg gcagaagaac aggtacgtat tctgcgtaaa ctgttcgatc
    25801 gctactatag cgaggttgcc gaagagggga cgtttttgtt cccgcacgtt gccgatacgt
    25861 tgggcgcgtt gcaggctaaa ggcctgccgc taggcctggt caccaacaaa ccgacgccgt
    25921 tcgtcgcgcc actgctcgaa gccttagata ttgccaaata ctttagcgtg gttatcggcg
    25981 gcgatgatgt gcaaaacaaa aaaccgcatc cggacccgct gttactggtg gctgagcgga
    26041 tgggaattgc cccacaacag atgctgtttg tcggcgactc acgcaatgat attcaggcgg
    26101 caaaagcggc aggttgccca tcagttggct taacctacgg atataactac ggcgaggcta
    26161 tcgatctcag ccagcctgat gtaatttatc agtctataaa tgaccttctg cccgcattag
    26221 ggcttccgca tagcgaaaat caggaatcga aaaatgacta agcccatcgt ttttagtggc
    26281 gcacagccct caggtgaatt gaccattggt aactacatgg gtgcgctgcg tcagtgggta
    26341 aacatgcagg atgactacca ttgcatttac tgtatcgttg accaacacgc gatcaccgtg
    26401 cgccaggatg cacagaagct gcgtaaagcg acgctggata cgctggcctt gtatctggct
    26461 tgtggtatcg atcctgagaa aagcaccatt tttgttcagt cccacgtacc agaacatgcg
    26521 cagttaggct gggcactgaa ctgctatacc tacttcggcg aactgagccg catgacccag
    26581 tttaaagata aatctgcgcg ttatgccgag aacatcaacg ctggtctgtt tgactatccg
    26641 gtgctgatgg ctgcggacat cctgctgtat caaactaatc tggtaccggt gggtgaagac
    26701 cagaaacagc acctggaact gagtcgcgat atcgcccagc gtttcaacgc gctgtatggc
    26761 gagatcttta aggtgccgga gccgtttatt ccgaaatctg gcgcgcgcgt aatgtcgctg
    26821 ctggagccga ccaagaagat gtccaagtct gacgataacc gcaataacgt tatcggcctg
    26881 ctggaagatc cgaaatcggt agtgaagaaa atcaaacgcg cggtcactga ctccgacgag
    26941 ccgccggtag ttcgctacga tgtgcagaac aaagcgggcg tttccaacct gctggatatc
    27001 ctttctgcgg taacgggcca gagcatccca gaactggaaa aacagttcga aggcaagatg
    27061 tatggccatc tgaaaggtga agtggctgat gccgtttccg gtatgctgac tgaattgcag
    27121 gaacgctatc accgtttccg caacgatgaa gccttcctgc aacaggtgat gaaagacggc
    27181 gcagaaaaag ccagtgtaca cgcttcccgt acgctgaaag cggtgtacga agcgattggt
    27241 tttgtggcga agccgtaata tcaaaacgct cggacggtcc cctcgcccct ttggggagag
    27301 ggttagggtg aggggagcag gcaagcgcca gtgggaatta ccctttgctc gcattgtcga
    27361 ataaatcact tcgtcatcac tctgaaaccg gggaaacccg gtttttttat cctcatttgc
    27421 aataatccga aaaaatgtga agcgcctcgc cgtttccaca tctcacagtt gccacttatc
    27481 ttcattttaa tgaagatata aacattcatt ttattgaaaa tatattatgc gtcgaacgtt
    27541 tatcaaaaaa gaaggcgtcg tcatcacgac gctggcccgt tatttgttgg gtgaaaaatg
    27601 cggtaatcga ctgaaaacca tagatgagct ggcaactgaa tgccgttcat cggttggcct
    27661 gacgcaggcc gcgttgaaaa cgttggaatc aagtggagcg atacggattg aacgccgtgg
    27721 gcgcaatggc agttatctgg tcgaaatgga taacaaagcg ctgctgagtc atgtggatat
    27781 caataacgtt gtgtgtgcca tgcctttgcc ctatacccgc ttgtacgaag gtttagcaag
    27841 cgggctgaaa gcccagtttg atggcattcc tttttattat gcgcatatgc gtggcgcgga
    27901 tattcgtgtg gagtgtttgc ttaacggtgt ctatgacatg gcagtagttt cccgcctggc
    27961 ggcggaaagt tatctcagcc aaaacaattt gtgcatcgcc ctcgagcttg gcccgcatac
    28021 gtatgttggt gaacatcaac tgatatgccg caaaggtgag tctggaaatg ttaagcgagt
    28081 aggtctcgat agtcgttcgg cggatcagaa aatcatgacc gatgtctttt ttggcgatag
    28141 tgatgtggaa cgtgtcgatc tctcttatca cgagagttta caacgcattg ttaaaggcga
    28201 tgtcgatgcg gttatctgga acgtggtggc ggaaaacgaa ctgaccatgc tgggattaga
    28261 ggcgacgccg ctcacagacg atccgcgatt tttacaggcc accgaagccg tggtcctgac
    28321 gcgagtcgat gattacccaa tgcaacaact gctgcgtgcc gttgtagata aacacgccct
    28381 gctcgcccat caacaacggg tagtgagtgg ggaacaggaa ccgagttatt aaacgaaagg
    28441 catctgatat ggaaaccaga ctcaacctgc tttgcgaggc aggcgttatt gataaggaca
    28501 tctgcaaagg catgatgcag gtcgtcaacg tactggaaac agagtgccat ctgccggtgc
    28561 gcagtgagca aggaacgatg gcgatgacac atatggcgag tgcactgatg cgcagtcgcc
    28621 gtggtgaaga aatagagccg ctggataacg aattgctggc agagctggcg caatccagcc
    28681 actggcaagc cgttgtgcaa ttgcatcagg tgttgttgaa ggaattcgca ctggaagtta
    28741 atccgtgtga agaaggctat ttgctggcca acctttatgg attatggatg gctgctaacg
    28801 aagaggtttg aagctcccga caaatccacg tcgcacaacc taaatattca aaaaaatgaa
    28861 tatttaattc aaggaacaga aacgaggcaa caagatgttt gtagaagcat tgaaacgcca
    28921 gaacccggcg ctgatttccg ccgcactaag tttgtggcag cagggcaaga tcgccccgga
    28981 cagctgggtg atcgacgtgg atcaggtact ggaaaacggt aagcgactga ttgagacggc
    29041 gcggctttac ggcattgaac tgtatctgat gaccaagcag tttggccgta acccatggct
    29101 ggcggaaaaa ttgctggcat taggttacag cggcattgtg gcggtggatt acaaagaggc
    29161 gcgagtcatg cgccgcgctg gtttgtcggt ggcgcatcag gggcatctgg tacaaatccc
    29221 ttgtcatcag gttgctgacg ccgttgaaca gggcaccgac gtcatcaccg tgtttactct
    29281 cgacaaagcg cgggaagttt ctgcggcagc ggtgaaggcc ggacgtgtgc agtttgtgct
    29341 gctcaaagtt tatagcgacg atgattttct ttatccgggg caggagagcg gttttgtaca
    29401 gcattcgctg cacgaggtgg ttgctgaaat taagaaactg ccgggtctgc atttagccgg
    29461 acttacccat ttcccttgcc tgctttggga tgaggctgcc ggaaaagttt tgccgacacc
    29521 gaatcttcac acgctgatac aggcacggga tcaactggcg aaatctggta ttgcacttga
    29581 gcaactgaac gcgccttcag cgaccagctg cacttcgctg ccattactgg cgcaatacgg
    29641 tgtgactcat gccgaacccg gtcatgcgct gacgggcact attccggcaa accagcaggg
    29701 cgatcagtct gaacgtatcg cgatgctctg gttgagtgaa atctcccatc atttccgtgg
    29761 cgacagctac tgctacggcg gcggttacta ccgtcgtggt catgcgcaac atgcgttggt
    29821 gtttacgcca gaaaatcaaa agattactga aaccaatctc aaaactgtgg atgacagcag
    29881 tatcgactac accctgtcgc tggcaggcga gtttccggta agcagtgcag tggtgctctg
    29941 tttccgcacg cagatttttg tcacccgtag cgatgtggtg ctggtgtccg gtattcaccg
    30001 tggcgaaccg aaaatcgttg gtcgttatga cagtcttgga aactctctgg gggcgtaatg
    30061 gcgcgatttg tggtgttagt gattgatagc tttggcgtag gggcaatgaa agatgtcacg
    30121 ctggtgcgtc cgcaagatgc gggagcgaat acatgtggtc acatcctgag ccagttgccg
    30181 catttgcagc taccaacgct ggagaagctg gggctaatca acgcattggg ttatgcgcca
    30241 ggcgatatgc agccgtcaga ttccgcaacc tggggcgtgg cagagctgca acatgaaggt
    30301 ggcgatacct ttatggggca tcaggaaatt ttaggcacgc gcccgttacc gccgctgcgg
    30361 atgccttttt gcgatgtgat tgaccgtgtt gagcaggcat tagtatccgc cggttggcag
    30421 gtggagcgcc gtggcgatga actgcaattt ctgtgggtca atcaggcggt tgcgattggc
    30481 gataatctcg aggcggattt aggccaagtc tataacatta ccgccaatct ctctgtgatc
    30541 tcttttgacg acgcaatcaa aattggtcgt atcgtgcgtg agcaggtaca ggtcggtcgg
    30601 gtcattacat ttggtggcct gttaaccgac agtcaacgca ttctcgatgc cgcagaaagc
    30661 aaagaagggc gctttattgg tatcaatgcg ccgcgttctg gcgcttatga caacggcttc
    30721 caggtcgtgc atatgggcta cggtgtcgat aaaaaagtgc aggtgccgca aaaactgtat
    30781 gaggcgggcg tgccaaccgt gctggtgggt aaggtggcag atatcgtcag caatccttat
    30841 ggcgtgagct ggcaaaacct ggtggatagc cagcggatta tggatatcac cctcgacgaa
    30901 tttaacaccc atccgacggc gtttatttgc accaatatcc aggaaaccga cctcgctggt
    30961 catgcagaag acgtcgcacg ttatgccgaa cgtttgcagg tcgttgaccg taaccttgcc
    31021 cggcttgttg atgcgatgca gccagatgat tgcctggtcg tgatggcgga tcacggcaac
    31081 gatccgacca ttggtcacag ccaccatacc cgcgaagtgg tgccgctgct ggtttatcag
    31141 caaggcctgg ctgctacgca gctcggtgtg cgcaccacgc tttctgatgt gggagctacc
    31201 gtgtgtgaat ttttccgtgc gccaccgcca caaaatggtc gctcttttct ttcctccctc
    31261 cggtttgcag gagacaccct atgagttttg atccgacggg ttacaccctg gcccatgagc
    31321 atctgcatat tgatctctcc ggctttaaaa acaacgtgga ctgccgcctt gatcagtatg
    31381 cgttcatttg ccaggagatg aacgacctga tgacccgggg tgtacgtaat gtgattgaga
    31441 tgaccaaccg ttacatgggg cgcaatgcgc aatttatgct cggtgtaatg cgcgaaaccg
    31501 ggatcaacgt ggtggcctgt actggttatt accaggatgc gtttttcccg gaacatgtgg
    31561 tgacccgcag cgtgcaggaa ctggcgcagg agatggtcga tgaaattgaa cagggtatcg
    31621 atggcacgga gctgaaagcc gggctcatcg cggagatcgg ctccagcgaa ggaaagatta
    31681 cgccgctgga agagaaggta tttattgccg ctgcgctggc gcataaccag accggacgcc
    31741 cgatctccac gcatacgtcg ttcagcacca tggggctgga acaactggct ctgttgcaag
    31801 cccacggagt tgatctttcg cgcgtcaccg ttggtcactg cgatctgaaa gacaacctcg
    31861 acaacatttt gaagatgatc gatctcggcg cgtacgtgca gttcgacacc attggtaaga
    31921 acagttacta cccggacgaa aagcgcattg cgatgctcca cgcgctacgt gaccgtgggt
    31981 tgctgaaccg cgtcatgctg tcgatggata ttacgcgccg ctcccattta aaagccaatg
    32041 gtggttatgg ctatgactat ttattgacca cctttattcc gcaattgcgc cagtcaggat
    32101 tcagtcaggc cgatgtggat gtgatgttac gtgaaactcc ctctcaattt ttccaataag
    32161 gacagactca tgaaaaagat tggcgttgca ggcttacagc gtgagcagat taaaaaaacc
    32221 attgaagcga cggctcctgg cagttttgaa gttttcattc acaacgacat ggaagcggca
    32281 atgaaagtga aatccgggca actggattac tacatcggtg cgtgtaatac cggtgcgggc
    32341 gcggcattgt cgattgccat cgcggtgatt ggctataaca aaagttgcac cattgccaaa
    32401 ccaggcatta aagcgaaaga cgagcatatc gccaaaatga tcgctgaagg aaaagtggcg
    32461 tttggccttt ccgttgagca cgtcgaacac gcgattccga tgctgattaa ccatctgaaa
    32521 taaaaggcac gactatggat ctgtatattc agattatcgt ggtggcgtgc ctgacgggta
    32581 tgacatcgct tctggcgcat cgctcggcgg ctgtttttca tgacggcatc cgcccgatcc
    32641 tgccgcaact gattgaaggc tatatgaacc gtcgcgaggc ggggagtatc gcttttggtc
    32701 tgagcattgg ttttgtggcc tcggtgggga tctcttttac cctgaaaacc gggctgctca
    32761 acgcatggtt actctttctt cctaccgata tcctcggcgt actggcgata aacagcctga
    32821 tggcgtttgg tcttggcgct atctggggcg tgttgatcct tacttgcctg ttgccagtaa
    32881 accagctgct gaccgcgctg ccggtggatg tattaggtag cctcggggaa ttaagctcgc
    32941 cggtagtttc tgcttttgca ctgttcccgc tggtggcgat tttctaccag tttggctgga
    33001 agcaaagtct ggtcgccgcc gtggttgttc tgatgacccg tgtggtagtc gtgcgctatt
    33061 tcccacatct taaccctgaa tccatcgaaa tctttattgg catggtgatg ctgctgggga
    33121 tcgcgataac tcacgacctg cgtcatcgtg atgaaaatga tattgatgcc agcgggcttt
    33181 cggtgtttga agaacgcacg tcgcggatta tcaaaaactt accctatatc gccatcgtgg
    33241 gagcattgat tgccgccgtt gccagcatga agattttcgc cggcagtgaa gtgtcgatct
    33301 tcactctgga gaaagcgtac tccgcaggcg taacgccgga acaatcgcaa acgctgatca
    33361 accaggcggc actggcagaa tttatgcgcg ggctgggttt tgtaccgttg attgccacca
    33421 ccgccttagc aacgggtgtg tatgcagttg cgggctttac ctttgtttat gcggtgggct
    33481 atctctcgcc gaatccgatg gttgcagcgg tattaggcgc agtggttatt tcggcggaag
    33541 tcttgctgct tcgttctatc ggcaaatggc tgggacgcta cccgtcggtg cgtaatgcgt
    33601 cggataacat ccgtaacgcc atgaatatgc tgatggaagt ggcgctgctg gtcggttcga
    33661 ttttcgcagc aattaagatg gcgggttata ccggattctc tatcgcggtt gccatttact
    33721 tcctcaacga atccctgggc cgtccggtac agaaaatggc ggcaccggtc gtggcagtaa
    33781 tgatcaccgg tattctgctg aatgttcttt actggcttgg cctgttcgtt ccggcttaag
    33841 gaaggcacct atgaagacgt ttcctctgca aagcctgacg cttattgagg cgcagcaaaa
    33901 gcagtttgcg ctggtggaca cgatttgccg tcactttccc ggcgcggagt ttctaaccag
    33961 cggtgatttg ggcttaacgc cggggctgaa tcaaccgcgt attacccaac gggtggagca
    34021 ggtgctggct gatgcatttc acgcacaggc tgcggcgctg gtgcagggcg cggggactgg
    34081 cgcgattcgc gccgggctgg cagctttgct caaaccgggg cagcgtcttc tggtgcatga
    34141 cgcgcctgtt tacccgacga cacgggttat tattgagcag atggggctga cgcttattac
    34201 tgttgatttc aatgacctgt cggcactgaa gcaggtcgtc gacgagcaac aaccggatgc
    34261 ggcgctggtg cagcatacgc gccagcagcc gcaggacagc tacgtgctgg cagatgtgct
    34321 ggcaacgttg cgcgcggcag gtgttccagc gttaaccgat gacaactatg cggtgatgaa
    34381 ggtggcgcga atcggctgtg aatgcggcgc gaatgtctcg acattttcct gcttcaagct
    34441 atttgggcca gagggtgttg gtgcagtggt cggcgatgct gatgttatca accgtattcg
    34501 cgccacgctt tactccggcg gtagccagat ccagggcgca caggcgctgg aagtattgcg
    34561 ttgtctggtg tttgcgccag tgatgcacgc ggtgcaggca ggggtatctg aacggttgct
    34621 ggctttgctt aacggtggtg aggtgccgga agtgaaaagc gcggtgattg ctaatgcgca
    34681 gtcgaaggtg ttgattgtcg agtttcatca gccgattgcc gccagagtgc tggaagaggc
    34741 gcaaaagcgc ggtgccttgc cttacccggt gggtgcagag tcgaaatatg aaatcccgcc
    34801 gctcttttat cgcctttccg gaacgtttcg ccaggcgaat ccacaatcag aacattgtgc
    34861 gattcgcatt aacccgaatc gcagcggtga agagacggtg ctgcggattt tgcgtgagag
    34921 tattgccagt atttaatgct ggatagcacc gtcaagctaa attccgtact gaacggtccc
    34981 ctcgcccctt tggggagagg gttagggtga ggggaacgta cgggatgtaa aattcaacgc
    35041 gccagcatcg ccggatgcga tgctggcgca tcttatccgg cctacggtta atgtctttta
    35101 ttatcaatag ttaaggtgat gcgattggcg cggcagaaga gttcggagac gtgcaccggt
    35161 ttgtcattct gatcaaaggc gattttgctg atgcgaaaca acggttcgcc cagttcgcat
    35221 ttcagccatt ttgcctgcgg gcgggtggcg gcaaagatat cgatggtctt tttgtcgctg
    35281 accactcgcg tgtcaaaacg ctcctgaaat aactgatagg tggagcttcc ttcgacgtaa
    35341 atctcatcaa agtcaggata acgcgacagc gggatccatg aactatcaat aaacagcggc
    35401 tctttatcga gatacatcac ccggcagaga tggaacactt cgctgtttcc ggggatgttc
    35461 agctttttgc aaaacggcgc ggcgctgacc cgttcctgtt cgatcacttt ctctttcgtc
    35521 gccttgcctt gtgagacgcc aaaatcggta aaaccactga cagtaagcag ggcgttttca
    35581 actttctggc tttgtacaaa ggtgcctttt ccctgccagc ggatcagtac gccgtccgcc
    35641 actaagtcgc tgatggcttt gcgaatggta atgcggctga cgttatattg tgtacaaagc
    35701 tcgttttcgg tagggatctg ttgcccggcc tggtaaaccc cctgcgcgat atcatccagc
    35761 agtcgctggc ggacggtagc gtagaggagt tgatgagagt agcggtccgt agctgacata
    35821 atcgaccctg aaataaagaa tgaattactc ggattatagg gtcgttttcc ggcaagtaac
    35881 agcacgttgg cgtgaagatg ctcacgccaa cgttatacct accaggcacc gtggtactga
    35941 atggttttcg ccgcgcacgc cgttccctgc gccatcgcct gcggtaatgt catccccgca
    36001 gaccagccgc aaaggaatcc ggcaatgaac gaatctccgg cacccatggt gtcgataacc
    36061 gtcaccggtt caggagcctg acgccagaac tgcgcgccat cccaggcaat gctgccgttt
    36121 tcacccagcg tgacaatcac tgttcctgcg ccacgggcaa caatcgcttt catcttcaga
    36181 cgcagcgttt cgtcttcttg cggtgcggag gcaaaggcaa aatcgagatg cggcaccagt
    36241 gtctgccaga gcgggctgtc ccacttgtcg gagaagtcga aagcggtaag tttgcccgca
    36301 gcgtgcagct gtgggaatgc gtcttccgca tgtccccaga ttgccgcgtg cacaatgtca
    36361 tactgcgcca gccaggcgta atcctcttca ctcagggcaa agtcggccat cacgccttcg
    36421 gtgtagtcgc caaaaacgcg atcattgtcg tgcagttcca cctgagtttg tgcggtaacg
    36481 ccgtgtttcg tatggacatg gctgatatcg acgcccatgc gggcgagatc ctgcttcagc
    36541 tttgtgccgt agtcatcgtc acccacccag gtaatgcatc ccggctgtat gccgtagcga
    36601 gtgcagtaca ccgccacatt gaccgcatta ccgccagaaa acgctttatt cagttgcggg
    36661 tagatatcga cgcagttatc gccgattgtc gccagggttt tcatctctca tcctccggca
    36721 gcagcgcgcg aaagcgttcc agcgcctggc gggcatagag tctgggctcg ttcatataca
    36781 tcgtcaccag ctccaccgta cagtaaccct catagccccg ctcaataata tcgcgcatca
    36841 gttcccgcag cggcattttg ccttctccag gaatgtaatg cgtgtcgctg gccccgtcgc
    36901 tgtcgacaat atgcagatga cgtaatttat cgcccagttt gtcgaaataa ctcatcaccg
    36961 gttccgcctg gacatacggc gcgcaaatgt cgaccatgct gaacaggcgc ggcgaaggca
    37021 ccagcgccag cgcatgaagc acatcattag cattacacac gatgttcgat tcatacggcg
    37081 ttaacggttc gaggattaga tccatgccga tgttttccgc gtactcatac agttcgctta
    37141 ggttctctgc cagccgtccc cagataacat taggtggcgt gagatagccc gcgtgggccg
    37201 cggaaatcag cgtataaccc gcgttcatct cttttgccat atccatcgcc agcttgatca
    37261 tgtcgaggct ttcgcgacgc atatgttcat cgcccagcat catgttatac ggatagccat
    37321 tggtttctgg cgtatagccg ataatcggca tctgatacgt ctgcgccagc gccttgattt
    37381 gtttgatgcc gcccgctttt aagtccggcg cgaacgcgtg cgggcgaccg ccccaaattt
    37441 cgatgccgtc gtaacccagc tcgcttgcat cacgaaatgc gtgttcaata ggcagccgct
    37501 ggtggccgca ggtaaacata cctgttttca tcgggtaact ccttgcgtaa atccggcccg
    37561 ttgccgggcc gggcgaggga ttaatattcc accagaccac cgtaatagcg gcgttcatcc
    37621 gggttgtgat ctttgtaaat agacaggtag tagcagagcc actccattgg cacgaacatc
    37681 aggaacggtg ccagccacgg gtgcagccct tgcgaaattt cggcgtaatc gatgacgatc
    37741 acgttgtcag tacgctgttt aacaaagtta atggcgcgtt cggtggtgtg gcgactttca
    37801 tcattgccga gcaggaacag gaacggaacg cccggttcga caatctccag cgggccatgg
    37861 cggaactctc cgctctcaat cacgcagccg tgcgtccagg taaattccat cagcgttaca
    37921 atgccttctt tgtaacccag cggacgcagc ggacccgcag caacggtata aatcatcggc
    37981 cactggctgg ccagttcacc aagctggcgg cctttttctt cccaggtgcg taccagatga
    38041 ccgagcgcat tcggcaactg cttgagatcg tttttgatct tgccgatttc cgcgttcggc
    38101 gcgaggcggg tgatcatctc cagcaccacg ctgtagcaga gcagcaggtg aatttcccag
    38161 atacagtcgg cctgataatc aatgctaaat tccgccgccg aggtaatcgg gctgtccgcg
    38221 cgtttggtga acgccgcagt gagtgcgccg caggcccggc ccagctccag cgctttgatt
    38281 acctcttccg ttttaccgta gtcagaaacg ccaatcaccg cgcaacgatc gtcgaggcga
    38341 tacggggtgt tatcgcagaa ctcccagccg gaaatggcgt agacctgaag atcggaaaag
    38401 cgatccgcca gatgtttcgc cgcttgcgcc gcgttgagtg gcgagccgca ggcaacgaaa
    38461 taaatacgat caatgtcgcg cttcaccatc tcttccacga tggcgtgcac cagcggaacg
    38521 tcatggctga gaactttttc cacttcctga accatatttt cggtgaccag aaagtccacg
    38581 gtgcttttat caatatccaa cattttattt tctccagata acattacgac aaagcgttga
    38641 gctggcggct acgcttcgcc cagaaggcgt aagcaggcag accagtagca ataacgatga
    38701 cggcgcagat aaggccggga atcggtgccc agacaaaggt tgaggcgacc agaatgaggc
    38761 ttgacgcaat ggcgagggtg gtcatcagcc cgaaagcagg agtacgccac agcggtttgt
    38821 aatcgtcgcg tttacgacac cagatgatgg agccgaaggt gagggtattt ttgaaacaca
    38881 tcaccagggt gaaataaccc agcaggctgg tgagatcgga aacgaagatg aagaagagcc
    38941 ccagcgcccc ttgcaggatg atggagacat ccggcgtgtt gtatttcgga tgcacatggc
    39001 cgaagcattt aaagaacagg ttgtctttcg ccatcgcgta ttccagccgc ggctggtaca
    39061 tcacgcagct ggaaagcgaa ccaagaatga cgatcatcgc cgtgatggca acaaagatcc
    39121 cagcggtgct gccgagtgcg gggatccagg tcagggcgtc ggaaatcggc gtttcagaat
    39181 tggcgagttt gtcgaagggc atcaggtcgg aaatcaccag cgccagcagg gtgtagagca
    39241 ccagaaccag cagacaggaa ccaatcagcg ctcgtggcat ggtttttccg gggtttttaa
    39301 tttcgccggt catataacag atagaggcca tgccggtata cgaccaactg gtggcagaga
    39361 tccccgccag cagcgccata aagctgcccg ttgcgccaat cgcagtggtg gtaggggcgg
    39421 caaaattctc cgctttaaac cagaagatcc caaggccaat gacgatagtg aacgggataa
    39481 ttttggcgat ggtaattagc gtctgaaacg ctgcgccgcc ttcaacggag cgcaggtgta
    39541 gcaacataaa ggcgataatt aatccggcgg cgataaattt accgggcaac ggatcgatag
    39601 gcgttaaaaa gccaagattg ctgacaatcg ccagcgccat aatcgacaat gacggcgcat
    39661 cgttggccca gaagctggcc cagccggaga ggaaagccag cggtcggctt ccggcatttt
    39721 tcagataaac ataatctgcg ccattttccg gataagcggt ggatagttcc gcatagacgc
    39781 acatttgcgg gatcacaatt aacccgccaa tgacaaacgt gagcaccgta agccacggcg
    39841 tgcccgctgc ttttgccact tcacccacag atacaaaaat accggagccg acggttgtcc
    39901 cgacggcgat tgcaagaacg gcccaaaatc cgagcttgcg ttggagttcc tggcttccca
    39961 tagcgatacc tttttcttgt ccaacacgtt gtaggggaga gtttgcagtc atttaaaagg
    40021 taacatgaca atgcatgatg aatataataa catatgatgt tatgtaatgc ggaggaagat
    40081 cacaaaattt cgcacaggat cgcgctgtgg ctaatgaatg tagttatcca attgaaatta
    40141 aagtgaaaat atttttacgg gtggggagca agaaggatat agaaacaaat acgccctcgg
    40201 aaaatccaga gggcgtcggg caattaaacc ggtgttagcc gatttctgtc agagacttac
    40261 tgtgcagtag gaccgcaacc gccaatgatt ttagaaatag aaattgccgg gtgcagcagg
    40321 tagtcgtaag agcagttctt atcacggttt tcaatatgac cagtacatgc agttaacgta
    40381 gccagtactg cacctaccag tgcaacttta ataaatttgt tcatttacat tcccggtaat
    40441 gactccaact tactgatagt gttttatgtt cagataatgc ccgatgacct tgtcatgcag
    40501 ctccaccgat tttgagaacg
//
LOCUS       DAJVUK010000015        40423 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.015, whole genome shotgun sequence.
ACCESSION   DAJVUK010000015 DAJVUK010000000
VERSION     DAJVUK010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40423
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.015"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(350..556)
                     /locus_tag="OQQ57_000798"
     CDS             complement(350..556)
                     /locus_tag="OQQ57_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HCS1955657.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMEQAEKATGDFY"
     gene            869..958
                     /gene="kdpF"
                     /locus_tag="OQQ57_000799"
     CDS             869..958
                     /gene="kdpF"
                     /locus_tag="OQQ57_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HCS1955658.1"
                     /translation="MSAGVIAGVLLVFLLLGYLVYALINAEAF"
     gene            958..2631
                     /gene="kdpA"
                     /locus_tag="OQQ57_000800"
     CDS             958..2631
                     /gene="kdpA"
                     /locus_tag="OQQ57_000800"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HCS1955659.1"
                     /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFAFIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
                     RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2654..4702
                     /gene="kdpB"
                     /locus_tag="OQQ57_000801"
     CDS             2654..4702
                     /gene="kdpB"
                     /locus_tag="OQQ57_000801"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HCS1955660.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     EGRLVAMTGDGTNDAPALAQADIAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSITNDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4711..5254
                     /gene="kdpC"
                     /locus_tag="OQQ57_000802"
                     /pseudo
     CDS             4711..5254
                     /gene="kdpC"
                     /locus_tag="OQQ57_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
     gene            5247..7931
                     /gene="kdpD"
                     /locus_tag="OQQ57_000803"
     CDS             5247..7931
                     /gene="kdpD"
                     /locus_tag="OQQ57_000803"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdpD"
                     /protein_id="HCS1955661.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE
                     AQRLRAQGLDIVVGVVETHGRKDTDAMLEGLAVLPPKRLAYRGRHICEFDLDAALARR
                     PALILMDELAHSNALGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATIEQFIASTFHARSQVLLPDDNGKLQPLTHPQG
                     MTPWDDTIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM"
     gene            7928..8605
                     /gene="kdpE"
                     /locus_tag="OQQ57_000804"
     CDS             7928..8605
                     /gene="kdpE"
                     /locus_tag="OQQ57_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HCS1955662.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFHLL
                     AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG
                     IGYRFML"
     gene            complement(8821..9078)
                     /locus_tag="OQQ57_000805"
     CDS             complement(8821..9078)
                     /locus_tag="OQQ57_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955663.1"
                     /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG
                     RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS"
     gene            9201..11399
                     /gene="speF"
                     /locus_tag="OQQ57_000806"
     CDS             9201..11399
                     /gene="speF"
                     /locus_tag="OQQ57_000806"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase SpeF"
                     /protein_id="HCS1955664.1"
                     /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT
                     CGKLDEIDATGYGIPVFIATENQERVPAEYLPCISGVFENCESRREFYGRQLETAASH
                     YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRSDLC
                     NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL
                     FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR
                     TKEARPFRLAVIQLGTYDGTIYNARQVVDKISHLCDYILFDSAWVGYEQFIPMMADCS
                     PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH
                     ASTSPFYPLFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV
                     DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGFDARNG
                     EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
                     ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQPQKEMFRKEHFPRV
                     SMNPQEANYAYSRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS
                     ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL"
     gene            11396..12734
                     /gene="potE"
                     /locus_tag="OQQ57_000807"
                     /pseudo
     CDS             11396..12734
                     /gene="potE"
                     /locus_tag="OQQ57_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415219.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
     gene            12810..12959
                     /locus_tag="OQQ57_000808"
                     /pseudo
     CDS             12810..12959
                     /locus_tag="OQQ57_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415222.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
     gene            13083..13733
                     /locus_tag="OQQ57_000809"
     CDS             13083..13733
                     /locus_tag="OQQ57_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 domain-containing protein"
                     /protein_id="HCS1955665.1"
                     /translation="MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKNLAETALY
                     QLQVTTKSPMGALVYGSGGLLIDNGWLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPI
                     ADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN
                     VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ"
     gene            complement(13774..14268)
                     /locus_tag="OQQ57_000810"
     CDS             complement(13774..14268)
                     /locus_tag="OQQ57_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955666.1"
                     /translation="MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTR
                     RLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPG
                     WQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
                     INTH"
     gene            complement(14483..16123)
                     /gene="pgm"
                     /locus_tag="OQQ57_000811"
     CDS             complement(14483..16123)
                     /gene="pgm"
                     /locus_tag="OQQ57_000811"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HCS1955667.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(16149..16694)
                     /gene="seqA"
                     /locus_tag="OQQ57_000812"
     CDS             complement(16149..16694)
                     /gene="seqA"
                     /locus_tag="OQQ57_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HCS1955668.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIAEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            16879..17643
                     /gene="ybfF"
                     /locus_tag="OQQ57_000813"
     CDS             16879..17643
                     /gene="ybfF"
                     /locus_tag="OQQ57_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCS1955669.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA
                     RDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPSGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            17783..18076
                     /gene="ybfE"
                     /locus_tag="OQQ57_000814"
     CDS             17783..18076
                     /gene="ybfE"
                     /locus_tag="OQQ57_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HCS1955670.1"
                     /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR
                     DKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV"
     gene            18216..18746
                     /gene="fldA"
                     /locus_tag="OQQ57_000815"
     CDS             18216..18746
                     /gene="fldA"
                     /locus_tag="OQQ57_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HCS1955671.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            18956..19042
                     /gene="uof"
                     /locus_tag="OQQ57_000816"
     CDS             18956..19042
                     /gene="uof"
                     /locus_tag="OQQ57_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HCS1955672.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            19035..19481
                     /gene="fur"
                     /locus_tag="OQQ57_000817"
     CDS             19035..19481
                     /gene="fur"
                     /locus_tag="OQQ57_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HCS1955673.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(19566..19892)
                     /locus_tag="OQQ57_000818"
     CDS             complement(19566..19892)
                     /locus_tag="OQQ57_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955674.1"
                     /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKEKQHQHFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
                     IRSNNK"
     gene            complement(19942..21348)
                     /gene="chiP"
                     /locus_tag="OQQ57_000819"
     CDS             complement(19942..21348)
                     /gene="chiP"
                     /locus_tag="OQQ57_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HCS1955675.1"
                     /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAVFTAIEMAEN
                     GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
                     DYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
                     KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPAYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLLGFAIGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
                     FQDERDVKFMVIAPFTIF"
     gene            complement(21795..23459)
                     /gene="glnS"
                     /locus_tag="OQQ57_000820"
     CDS             complement(21795..23459)
                     /gene="glnS"
                     /locus_tag="OQQ57_000820"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HCS1955676.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTRQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSSEIWIDRAD
                     FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG
                     RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL
                     KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
     gene            complement(23662..25608)
                     /gene="nagE"
                     /locus_tag="OQQ57_000821"
     CDS             complement(23662..25608)
                     /gene="nagE"
                     /locus_tag="OQQ57_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HCS1955677.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLNQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPSTAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            25941..26741
                     /gene="nagB"
                     /locus_tag="OQQ57_000822"
     CDS             25941..26741
                     /gene="nagB"
                     /locus_tag="OQQ57_000822"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HCS1955678.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            26801..27949
                     /gene="nagA"
                     /locus_tag="OQQ57_000823"
     CDS             26801..27949
                     /gene="nagA"
                     /locus_tag="OQQ57_000823"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HCS1955679.1"
                     /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLARHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            27958..29178
                     /gene="nagC"
                     /locus_tag="OQQ57_000824"
                     /gene_synonym="nagR"
     CDS             27958..29178
                     /gene="nagC"
                     /locus_tag="OQQ57_000824"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HCS1955680.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            29226..29978
                     /gene="nagD"
                     /locus_tag="OQQ57_000825"
     CDS             29226..29978
                     /gene="nagD"
                     /locus_tag="OQQ57_000825"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HCS1955681.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY
                     PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETSSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI"
     gene            30375..32039
                     /gene="asnB"
                     /locus_tag="OQQ57_000826"
     CDS             30375..32039
                     /gene="asnB"
                     /locus_tag="OQQ57_000826"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HCS1955682.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
                     EMKSLVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSNQQLETARFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
     gene            32420..32496
                     /locus_tag="OQQ57_000827"
     tRNA            32420..32496
                     /locus_tag="OQQ57_000827"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32454..32456,aa:Met,seq:cat)
     gene            32505..32589
                     /locus_tag="OQQ57_000828"
     tRNA            32505..32589
                     /locus_tag="OQQ57_000828"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32539..32541,aa:Leu,seq:tag)
     gene            32613..32687
                     /locus_tag="OQQ57_000829"
     tRNA            32613..32687
                     /locus_tag="OQQ57_000829"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32645..32647,aa:Gln,seq:ttg)
     gene            32722..32796
                     /locus_tag="OQQ57_000830"
     tRNA            32722..32796
                     /locus_tag="OQQ57_000830"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32754..32756,aa:Gln,seq:ttg)
     gene            32812..32888
                     /locus_tag="OQQ57_000831"
     tRNA            32812..32888
                     /locus_tag="OQQ57_000831"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32846..32848,aa:Met,seq:cat)
     gene            32937..33011
                     /locus_tag="OQQ57_000832"
     tRNA            32937..33011
                     /locus_tag="OQQ57_000832"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32969..32971,aa:Gln,seq:ctg)
     gene            33049..33123
                     /locus_tag="OQQ57_000833"
     tRNA            33049..33123
                     /locus_tag="OQQ57_000833"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:33081..33083,aa:Gln,seq:ctg)
     gene            complement(33277..34452)
                     /gene="ubiF"
                     /locus_tag="OQQ57_000834"
     CDS             complement(33277..34452)
                     /gene="ubiF"
                     /locus_tag="OQQ57_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HCS1955683.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRDNDLQELELKGGETIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            34598..36022
                     /gene="miaB"
                     /locus_tag="OQQ57_000835"
     CDS             34598..36022
                     /gene="miaB"
                     /locus_tag="OQQ57_000835"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HCS1955684.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            36175..37215
                     /locus_tag="OQQ57_000836"
     CDS             36175..37215
                     /locus_tag="OQQ57_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HCS1955685.1"
                     /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD
                     NHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLTIKEARVLEQSAESV
                     PEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
                     ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER
                     NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL
                     PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL
                     AAERKREEQEQK"
     gene            37212..37679
                     /gene="ybeY"
                     /locus_tag="OQQ57_000837"
     CDS             37212..37679
                     /gene="ybeY"
                     /locus_tag="OQQ57_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HCS1955686.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
     gene            37769..38647
                     /gene="corC"
                     /locus_tag="OQQ57_000838"
     CDS             37769..38647
                     /gene="corC"
                     /locus_tag="OQQ57_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HCS1955687.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            38672..40210
                     /gene="lnt"
                     /locus_tag="OQQ57_000839"
     CDS             38672..40210
                     /gene="lnt"
                     /locus_tag="OQQ57_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HCS1955688.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDGDQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSVNGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
BASE COUNT         9624 a        10348 c        10515 g         9936 t
ORIGIN      
        1 gaacaggcca cgccggtggg ggcaccaatg cgcaccccgg ctgaaccctg aacaatgcta
       61 ccgccatact gcgtcatgtc gccctgacgc gctgccggtt ttccgctcat ttctcatcct
      121 tgttttatcg ggttatttgt ccgctgacag gcaaaaccct acagatttat aagaaagcct
      181 taagtgagat atccatcaga tagaaacaat taggaaaata tttatatatt tttcctgaat
      241 atatttcagc tgggtaatac catatctaaa tatttacctg aacatcttcc taataaaaaa
      301 accgccagca tctccactag cggttttcaa tgtattcaaa actcggcaat cagtaaaaat
      361 caccggttgc cttttcggcc tgttccatcc aaaccggttt atcgctggtt ttcgaccaga
      421 cgcggtgcag gtagctgtaa aagcgggcgc ggtctttcca gaaaagcatg aaaggcagcg
      481 ccagaacgcc cgctgcaacc gcatatgtac ggcgtaaaaa gataagccat gcaggatatt
      541 ctctgtagag ttccatactt ttctccccct tttgtatcta cccggtgaat agcaccggaa
      601 aaatgaattt gtttatctga tgaaaatagt accgcctttt gtgtaatttt actactcatc
      661 cgaccactta tttttgctta ttgatggttt atttacattc actctgtaat taagttgcac
      721 aaaagttaaa ttaatgctaa acattagtta aaccatggct tttgccattt ttatactttt
      781 tttacacccc gcccgcagat ttttgcgaaa tctttgcagc cagaattcta ctcttccggt
      841 atcactttta ggccactgga ggtgcactgt gagtgcaggc gtgatagccg gcgtgttgct
      901 ggtgttttta ttactgggtt atttggttta tgccctgatc aatgcggagg cgttctgatg
      961 gctgcgcaag ggttcttact gattgccacg tttttactgg tattaatggt gctggcgcgt
     1021 cctttaggca gcgggctggc gcggctgatt aatgacattc ctcttccagg tacagcgggc
     1081 gttgaacgta tactctttcg tttacctggc gtctctgacc atgagatgaa ctggaagcaa
     1141 tatctttgtg ccattctcgg cctgaacatg ctggggctgg cggtgctgtt ttttatgttg
     1201 ctcggtcagc actatctgcc gcttaatcca cagcagttgc cggggctgtc gtgggatctg
     1261 gcgctgaata ccgccgtcag ctttgtcacg aataccaact ggcaatctta tagcggtgaa
     1321 accacgttga gctatttcag ccagatggca ggcttaacgg tacaaaactt tctttctgcc
     1381 gccagcggga ttgcggtgat ttttgccttc atccgtgcgt ttactcgcca gagcatgagc
     1441 acactcggga atgcctgggt cgatctgcta cgcatcacgt tatgggtgct agtccctgtg
     1501 gcgttgttga tcgcactgtt ttttattcaa caaggtgcgc tgcaaaactt tctgccctat
     1561 caggcagtga ataccgttga aggagcgcaa cagctgttac ccatgggacc agtagcttct
     1621 caggaagcga tcaagatgct cggtactaac ggcggtggct tctttaatgc caactcgtcg
     1681 catccgtttg aaaacccaac cgcactgacc aacttcgtgc agatgctggc gatcttcttg
     1741 atcccaacag ctctgtgctt tgcctttggt gaagtgacgg gcgatcgccg ccaggggcgc
     1801 atgttgctgt gggcgatgtc agtgattttt gtcatctgcg taggcgtggt tatgtgggca
     1861 gaagttcagg gtaatcctca tctgctggcg ctcggcgcag acagcagcat caatatggaa
     1921 ggtaaagaga gccgtttcgg cgtgctggtc agtagcctgt ttgcggtcgt gactacggcg
     1981 gcgtcctgtg gcgcggtgat tgcgatgcat gattcgttta ccgctctcgg cggcatggtg
     2041 ccgatgtggc taatgcaaat tggtgaagtg gtgttcggcg gtgtcggttc tggtctttac
     2101 ggcatgatgc tgtttgtcct gctggcggtg tttattgccg ggctgatgat tggtcgtaca
     2161 ccggaatatc tgggtaaaaa aatcgacgta cgcgagatga aactgactgc actggcgatt
     2221 ctggttactc caacactggt actgatgggc gcggcgttgg cgatgatgac cgacgccgga
     2281 cgtagcgcca tgcttaaccc tggcccgcat ggttttagcg aagtgctgta cgccgtgtcg
     2341 tccgccgcta acaacaacgg cagcgccttt gccggattaa gcgccaactc tccgttctgg
     2401 aactgtttac tggcgttctg catgtttgtc ggtcgcttcg gggtgattat cccggtgatg
     2461 gcaattgccg gttcgctggt gagtaaaaag agccaacccg ccagctccgg cacgctgcca
     2521 acgcacggcc cgctgtttgt tggcctgtta atcggcaccg tgttgctggt tggcgcactg
     2581 acctttatcc ctgccctggc gcttggtccg gtggcggaat atctctcctg atgatattga
     2641 gtgagcactg aatatgagtc gtaaacaact ggcgctattc gaaccaacac ttgtcgttca
     2701 ggcgctgaaa gaagcggtga aaaaattaaa cccgcaggcg caatggcgca atccggtgat
     2761 gtttatcgtc tggatcggca gtctgctgac cacctgtatt agcatcgcga tggcaagcgg
     2821 tgcgatgcct ggcaatgcgc tgtttagcgc ggcaattagc ggctggctgt gggtcaccgt
     2881 actgttcgct aatttcgccg aggcgctggc agaaggccgc agtaaagcgc aggccaacag
     2941 tcttaaaggg gtgaaaaaaa ctgcctttgc ccgcaagctg cgtgagccga aatatggcgc
     3001 tgcggcggac aaagttcctg ccgatcaact gcgtaaaggt gacatcgtgc tggtagaagc
     3061 tggcgatatt atcccctgcg atggtgaagt cattgaaggc ggcgcatcgg tcgatgaaag
     3121 cgccatcacc ggggaatcgg caccggtgat ccgtgaatcc ggcggcgatt ttgcctccgt
     3181 caccggcggc acgcgtattc tttctgactg gctggtgatt gagtgtagcg ttaaccccgg
     3241 tgagacattt ctggatcgga tgatcgcgat ggtggaaggc gcacagcgac gcaaaacacc
     3301 gaacgagatt gccctgacta tcctgctgat tgctctgacc atcgtctttt tactggcaac
     3361 cgccacgctg tggccgtttt ccgcgtgggg cggtaatgcc gtgagtgtaa cggtactggt
     3421 ggcgctgctg gtctgtctga tcccaaccac tattggcggc ctgttgtcag cgatcggcgt
     3481 cgccgggatg agtcggatgc tgggcgcgaa tgtgattgcc accagcggac gtgcagttga
     3541 agcggcaggt gacgttgacg ttctgctact ggataaaacc ggcaccatca cactcggtaa
     3601 ccgtcaggcg tcggagttta tccctgcgca gggcgtggat gaaaaaacgc tggctgacgc
     3661 cgcacaactg gcttcgctgg ctgatgaaac gccggaaggc cgcagtattg tgatcctcgc
     3721 caagcaacgt tttaacctgc gcgagcgcga tgtgcagtcg ctccatgcca cctttgtacc
     3781 gtttactgcg caaagccgga tgagcgggat caacatcgac aaccgcatga tccgtaaagg
     3841 ttctgtcgat gccattcgcc gccatgttga ggctaacggc ggtcacttcc ctgccgatgt
     3901 tgatcaaaaa gtcgatcagg ttgcgcgtca gggggccacg ccgctggtgg tggtggaagg
     3961 ttcccgtgtg ctgggcgtta ttgcgctgaa agatatcgtc aaaggcggta ttaaagagcg
     4021 cttcgcccag ctgcgcaaaa tgggcattaa aacggtgatg attaccggcg ataaccgtct
     4081 gactgccgcc gccattgctg cggaagcggg cgtcgatgat tttctcgccg aagcgacacc
     4141 ggaggccaag ctggcattga ttcgtcagta tcaggcggaa ggccgtttgg tggcgatgac
     4201 cggcgacggc accaacgatg ctccggcgct ggcgcaagca gatatcgcgg tggcgatgaa
     4261 ctccggcacc caggcggcga aagaggcggg caatatggtc gatctcgact ctaacccgac
     4321 caagttgatc gaggtggtgc atattggcaa acagatgctg atgacccgtg gctcgctgac
     4381 caccttcagc attaccaacg atgtggcgaa atacttcgcc attattccgg cggcgttcgc
     4441 ggcaacgtat ccgcagttaa atgcgctgaa catcatgcgc ctgcattcgc ccgactccgc
     4501 cattctcagt gcagtcattt tcaacgcctt gattatcgtc tttttgattc ctctggcgtt
     4561 aaaaggcgtg agttataaac cgcttaccgc ttctgccatg ttgcgccgta acttatggat
     4621 ttacggtctg ggtgggctgc tggtgccgtt tattggtatc aaagtcattg atttactgct
     4681 gaccgtttgc ggtctggtgt gaggtttacc atgcgtggct tacgtccggc attatcgaca
     4741 tttatctttc tgttattgat tactggcggc gtttacccgc tgctgaccac cgtgctgggg
     4801 caatggtggt ttccctggca ggccaacggt tcgttgattc gtgaaggtga tacggtgcgg
     4861 ggttcggcat taatcgggca gaattttacc ggcaacggca gaaatgccct ataatccaca
     4921 ggcttctggc gggagcaatc tggcggtcag taaccctgag ctggataaac aaatagccgc
     4981 acgcgttgct gcattacggg ccgctaaccc ggatgccagt acgaacgttc cggttgaact
     5041 ggtgacggca tcggcaagcg ggctggacaa taatatcacc ccgcaagcgg cggcctggca
     5101 gatcccacgc atcgcgaaag cgcgtaatct cagcgttgaa cagctcacgc agctgatcgc
     5161 aaaatacagc caacaaccgc tggtgaaata tatcggccag ccggtcgtca acattgtcga
     5221 actcaatctg gcgctggata agcttgatga ataacgaacc cttacgtccc gaccccgatc
     5281 gtctgctgga acaaactgcc gcgccgcatc gggggaagct gaaagttttc ttcggtgcct
     5341 gtgcaggcgt cgggaagacc tgggcgatgc tggcagaagc ccagcgactg cgggcgcaag
     5401 ggctggatat tgtggttggc gtggtagaaa cccacgggcg aaaagatacc gacgcaatgc
     5461 tggaagggct ggctgttctg ccgccaaaac gcctggcgta ccgtgggcgg cacatctgcg
     5521 agtttgacct cgatgccgcc ctcgcccgcc gtccggcgct gatcttaatg gacgaactgg
     5581 cgcacagtaa tgcgctaggt tctcgtcacc ctaaacgctg gcaggacatc gaagagctgc
     5641 tggaagcagg cattgatgtt ttcactaccg tcaacgttca gcatctggaa agtctgaatg
     5701 atgtggtcag cggcgtcacc ggaattcagg tacgggaaac cgtgcccgat ccttttttcg
     5761 atgccgccga cgacgtggtt ctggtggact tgcccccgga cgatctgcgc cagcggctga
     5821 aagaaggcaa agtctatatt gccgggcagg cggagcgcgc cattgaacat tttttccgca
     5881 aaggcaatct gatcgccctg cgcgaactgg cactgcgccg tactgccgat cgcgttgatg
     5941 agcaaatgcg cgcctggcgg gggcatcctg gcgaagagaa agtctggcac acgcgcgacg
     6001 cgatcctttt atgcatcggc cataacaccg gtagtgagaa gctggtccgc gcggcggcgc
     6061 ggctggcgtc acggctgggt agcgtctggc acgcggtgta tgttgaaacc cctgccctgc
     6121 accgcttacc ggaaaaaaaa cgtcgggcaa ttctcagcgc cttacgtctg gcgcaggagc
     6181 tgggcgcgga gacggcaaca ctttctgatc cagcggaaga aaaagcagta gtgcgttatg
     6241 cccgtgaaca taatctcggc aagattattc tcggtcgccc ggcctcgcgc cgctggtggc
     6301 gtcgggaaac gtttgctgac cgactggcgc gcatcgcccc cgatctcgat caggtgctgg
     6361 tcgcgcttga tgaaccaccc gcccgcacga ttaacaacgc gccggatagc cgctctttta
     6421 aagacaagtg gcgggtacag attcagggat gcgtggttgc cgccgcgtta tgcgccgtta
     6481 tcactttaat tgccatgcag tggctgatgg cgtttgatgc cgccaacctg gtgatgctgt
     6541 atctgcttgg cgtggtggtg gtggcgctat tttatggacg ctggccttcg gtggttgcta
     6601 ccgtcattaa tgtggtgagt ttcgatctct tttttatcgc cccacgcggc acgctcgccg
     6661 tctctgatgt gcaatatctg ctgaccttcg cagtgatgtt aaccgtcggg ctggtgatcg
     6721 ggaaccttac tgctggcgtg cgttatcagg cgcgggtagc ccgttaccgc gagcaacgca
     6781 cacggcactt atatgaaatg tcgaaagctc tggcggtggg ccgcagtccg caggacatcg
     6841 ccgccaccat cgaacaattt attgcctcca cgtttcatgc ccgcagtcag gtgttgttgc
     6901 ccgatgacaa cggtaaattg cagccgttaa cacatccgca aggaatgacg ccatgggacg
     6961 ataccatcgc gcagtggagt tttgataaag gcctgcctgc gggcgcgggc accgacacgt
     7021 tacccggtgt accgtaccag attttgccgc taaaaagcgg cgagaaaacc tacgggctgg
     7081 tggtagtgga gccggggaat ctgcgccagt tgatgatccc ggaacagcag cgcctgctgg
     7141 agacgtttac gctgttagtc gccaatgccc ttgagcggct gacgctaacc gccagcgaag
     7201 aacaggcgcg gatggcaagc gaacgtgaac agatccgcaa cgccctactg gcagcgcttt
     7261 cgcatgattt acgcacgccg ctcacggtgc tgttcggtca ggcagaaatc ttaacgctcg
     7321 atctggcaag cgaaggatcg ccccacgccc gccaggccag cgagattcgt cagcatgtgc
     7381 tgaacactac ccgactggtg aataatctac tggatatggc gcgaattcag tccggcggct
     7441 ttaatttgaa gaaagagtgg ttaacgctgg aagaagtggt cggtagcgcg ctgcaaatgc
     7501 tggaaccggg tttatcgtcg cccatcaatc tttctctgcc agaaccgctg accttaatcc
     7561 acgttgacgg gccactcttt gaacgggtgc tgattaatct gctggagaac gcggtgaaat
     7621 atgcgggtgc gcaggccgaa attggtatcg atgcccacgt tgagggcgaa aatctacaac
     7681 tggatgtctg ggataacggc cccggtcttc cgccaggcca ggagcagacg atatttgata
     7741 agtttgctcg cgggaataaa gagtcggcag taccgggggt agggcttgga ctggcaattt
     7801 gtcgggcgat agtggatgta cacgggggca ctattaccgc gttcaaccga ccggaaggtg
     7861 gtgcctgttt tcgtgttaca cttccccagc aaactgcccc tgaacttgaa gaatttcatg
     7921 aggatatgtg acaaacgttc tgattgttga agatgaacag gctattcgtc gctttctgcg
     7981 cacggcgctg gagggcgacg ggatgcgcgt ctatgaggcc gaaacgctgc aacgcggctt
     8041 gctggaagcg gctacccgta agccagattt gattattctc gatctcggcc tgcccgatgg
     8101 tgatgggatt gagtttatcc gcgacctgcg ccagtggagc gcggtgccgg tgattgtgct
     8161 ttccgcacgc agcgaagaga gcgacaaaat cgccgcgctg gatgccggag cggatgatta
     8221 tctgagtaag ccgtttggca ttggcgaatt gcaggcccgt ctgcgcgtcg ctttacgccg
     8281 ccactccgct accgccgcgc ccgatccgct ggtgaaattt tccgatgtta ccgtcgattt
     8341 agccgcccgc gtgattcacc ggggtgagga agaggtgcat ctcacaccaa ttgagttcca
     8401 cctgctggcg gtgctgctca acaatgccgg aaaagtactc acccagcgcc agctccttaa
     8461 ccaggtgtgg gggccaaacg cggtcgaaca cagtcactat ttgcgtattt atatgggaca
     8521 tctgcgacaa aaactggaac aggatcccgc ccgcccacgc catttcatta ctgaaaccgg
     8581 tattggctat cggtttatgc tttgaatatt aattttaata cagcctgcct tttattaatt
     8641 aaagccgtaa taataaatac ggctttttat cttaaacaac acacaaaaat aacaattcaa
     8701 tattttatat tactgagtaa aaagctcatc attaaataaa ttaagattga tcatttttta
     8761 ttgatcacct tcacagttca accgtatttc ctggatagaa tatcttcacc ttcattcaca
     8821 tcaggaaagg taaattaaat ggaaaataac agccgcacta tgccccatat aaggcggaca
     8881 actcatatta tgaagtttgc tcatcgcaat agcttcgact ttcacttctt caatgcccgt
     8941 tagtctaccg actaagggca cttcagcgta caggtcttcc tgactctctg tattacaggc
     9001 atatgcctgt attccgcagt gctcattctc tgttaaccct tgtattatca gccaccggac
     9061 tggtaagggt ttctgcattc tgaaaaaagc aatctacctg atttatttat cagcggggta
     9121 actttgcttt tttccggcac gatcgatttc tcattcgaga aattgaggac ctgctattac
     9181 ctaaaataaa gagatgaaaa atgtcaaaat taaaaattgc ggttagtgat tcttgcccgg
     9241 actgttttac cacgcagcga gaatgtatct acattaatga aagtcgtaat atcgatgtgg
     9301 cggcaatcgt tttatcgctc aacgatgtta catgcggaaa actcgatgaa atcgatgcca
     9361 cgggttatgg catcccggta tttattgcta ctgaaaatca agaacgtgta cccgcagagt
     9421 atttgccctg tatttcgggt gtctttgaga attgcgaatc gcgacgagaa ttttatggtc
     9481 gtcagttaga aaccgctgcc agccattatg aaactcaact gcgcccacct ttcttccgcg
     9541 cactggtcga ttatgtcaat caaggtaaca gcgcgtttga ttgccctggt catcagggcg
     9601 gcgaattttt ccgtcgccat ccggcgggga atcagtttgt ggaatacttt ggtgaggcgc
     9661 tgttccgttc cgacttgtgc aacgcagacg tagcaatggg tgatctgctg attcacgaag
     9721 gcgcgccatg cattgcacag caacatgcgg caaaagtgtt caatgccgat aaaacatact
     9781 tcgttctaaa tggcacttca tcttctaaca aagtggtttt aaacgccctg ctgacaccgg
     9841 gtgatctggt gctgtttgac cgcaataacc acaaatctaa ccaccacgga gcgttgctac
     9901 aggctggtgc aacaccggtt tatctggaaa ccgcacgtaa cccgtatggc tttatcggtg
     9961 gcattgatgc gcactgtttt gaagaaagtt acctgcgtga gctgatcgcg gaagtcgcac
    10021 cgcagcggac aaaagaggct cgtcctttcc gcctcgccgt tattcagcta ggcacctacg
    10081 acggtacgat ttataacgcc cgccaggtgg tggataaaat tagtcatctg tgtgactaca
    10141 ttctgtttga ctccgcatgg gtcggctatg agcaatttat cccgatgatg gctgactgtt
    10201 caccgctgtt gctggatctt aatgagaacg atccgggcat tctggttacg caatctgtgc
    10261 ataaacagca ggctggtttt tctcaaactt cacaaatcca taaaaaagac agccacatca
    10321 aagggcaaca gcgttatgta ccgcacaaac gcatgaacaa cgcctttatg atgcatgcct
    10381 ccaccagccc gttctatccg ctgtttgccg cactggatat caacgccaaa atgcatgaag
    10441 gtgtcagcgg tcgtaatatg tggatggatt gtgtggtaaa tggcattaat gcccgcaagc
    10501 tgatcctcga taactgtcag catattcgtc cgttcgtacc tgaactagtg gatggtaaac
    10561 cctggcagtc gtatgaaaca gcgcaaattg cggttgatct gcgcttcttc cagtttgtac
    10621 caggggaaca ctggcactct tttgaaggct atgcagagaa tcaatacttt gtcgatccat
    10681 gcaaactgtt gctgacaacc ccaggttttg atgcacgtaa cggcgaatat gaagcgttcg
    10741 gtgtacccgc gacgattctt gctaacttcc tgcgcgaaaa tggcgtagtg ccggaaaaat
    10801 gcgatcttaa ctccatcctc ttcctgctga ctccggcaga agatatggcc aaacttcagc
    10861 aacttgttgc cctgctggta cgcttcgaaa aactgcttga gtccgacgcg ccattagcag
    10921 aagtgctgcc ttccatctac aaacagcatg aagagcgcta cgccggttat acccttcgtc
    10981 agttatgcca ggaaatgcat gatttgtatg cccgtcacaa cgtgaaacaa ccgcaaaaag
    11041 agatgttccg taaggaacac ttcccacgcg taagcatgaa tccacaagaa gccaactacg
    11101 cctattcacg cggtgaagtg gagctggttc gtctgccgga tgccgaaggc cgtatcgctg
    11161 ccgaaggtgc gcttccttat cctccgggtg tgctgtgtgt tgttccgggt gaaatctggg
    11221 gtggtgctgt tttgcgttac ttcagcgctc tggaagaagg gatcaacctg ctgccaggtt
    11281 ttgcaccgga gctgcagggt gtctatatcg aagaacatga tggtcgtaag caagtttggt
    11341 gctatgtcat caagcctcgt gatgcgcaaa gcaccctgtt gaaaggggaa aaattatgag
    11401 tcaggctaaa tcgaacaaaa tgggcgtcgt tcagttaacc atactgacga tggtcaacat
    11461 gatgggctcc ggtatcatca tgctgccgac aaagcttgcc gaagttggga caatctcaat
    11521 tatctcctgg ctggtgacag ccgtaggctc aatggcactg gcatgggcat tcgcaaaatg
    11581 cggtatgttc agccgtaaat caggcggtat gggcggttat gcggagtatg ctttcggtaa
    11641 gtccggcaat tttatggcga actacaccta cggtgtctcg ctgctgattg ctaacgtcgc
    11701 gattgctatt tcggcggttg gttacggcac cgaactgctc ggcgcgagtt tgtcgccagt
    11761 gcagattggt cttgcgacca tcggagtgct gtggatttgt accgtggcta actttggtgg
    11821 tgcgcgcatt accgggcaaa tcagtagcat tactgtgtgg ggagtcatta ttccggtcgt
    11881 cggtctgtgc attattggct ggttctggtt tagtccgacg ctgtacgcta actcatggaa
    11941 cccgcaccat gtgccgttct ttagcgctgt aggttcttcc atcgccatga cgttgtgggc
    12001 tttcctcggt ctggagtcag cctgtgccaa cgccgaagta gtggaaaacc cggaacgtaa
    12061 cgtgccgatt gcagttcttg gcggtacttt aggtgcggcg gtgatttata tcgtctccac
    12121 caacgtgatt gccgggattg tgcctaatat ggagctggca aattcaacgg caccatttgg
    12181 cctggctttc gcacagatgt tcacaccaga agtgggtaaa gtcattatgg cgctgatggt
    12241 gatgtcctgc tgcggttcac tgcttggctg gcggttcact gcttggctgg cagttcacca
    12301 ttgcccaggt gtttaaatct tcatctgatg aaggctactt ccctaaaatt ttctcccgtg
    12361 taaccaaagt ggatgcaccg gtgcagggaa tgttgaccat tgtgattatt cagagtggat
    12421 tggcactgat gaccattagc ccgtcactga acagccagtt caacgtgctg gttaacctgg
    12481 ccgtggtgac caatatcatt ccgtatattc tgtcaatggc ggcattagtc attattcaga
    12541 aggtcgctaa tgtgcccccc tcaaaagcga aagtagcaaa ctttgttgcc tttgttggtg
    12601 cgatgtacag tttctatgcg ctgtactcat ccggggaaga agccatgctg tacggttcta
    12661 tcgtgacctt ccttggttgg acactgtatg gtctggtatc accatgcttt gaactgaaaa
    12721 ataaacacgg ttaataaaac aaagtaaaaa agggcgattg aatgatcgcc ctttctgttt
    12781 gttggcaaat agttcgttat ttatgccgca tccggcagat gtagggtcta aacgcgatcg
    12841 aacacagcaa ctatttgcgt aattatatgg ggcatctgcg acaaaaactg gaacaggatc
    12901 cggcccggcc tcgccatttt attactgaaa ccggtattgg gtatcggttt atgctttgaa
    12961 aaaagtggca atgtatggat aaagtcattt tttattcaaa tataaggaac ttaatattta
    13021 aaaaatgttc catacaattc ctcatcataa atgacaccgt agcacacaag gagcaagtag
    13081 cgatgcgtga aatgaatcag ttagtaaata ctgaagattc agcctggcca ataatccaga
    13141 actggttaaa agacgccaca aaccataccg aactcttacc ggttaataaa aatttagccg
    13201 aaaccgcact ttatcaatta caggtgacaa caaaatcacc gatgggtgcg cttgtctatg
    13261 gctccggagg tctgctgatt gataatggtt ggttacgcat agcaggatct ggtcaccccc
    13321 ggttgccacg agatccagta agttggacac aacgccctga attcgcaggc gtgcgggctt
    13381 tacccatcgc tgacgatgtc gcagggggaa tttttgctct taatggtggc gatcttgggg
    13441 aagatactgg ctgcgtttat tattttgcgc cagatacgct gaattgggaa agtctggaag
    13501 ttggatattc tgagtttctt cagtgggcat tatccggtga tttagatacc ttctatgaaa
    13561 atgtacgatg gcagcaatgg cgagaagacg taataaaatt atcggcaacg gaagccttca
    13621 cgttctaccc tttcttatgg gtacaaagtg aagaagcaag aacaagaaaa gttatttcgc
    13681 ttactgaact ctgggaaatg cagtatcaaa tgaaagaaac attcacgcaa taagacatgt
    13741 tcaggtccgg gtttcattcc cggactcact attttaatgt gtatttatcg ctttcaattc
    13801 ttgctggcaa ttttctgact ggcagcgtcg taactcaata atcccgacat gcatcatcga
    13861 gccaaaaaat ccgctttcgc tgacataatc ctcattgact atcggtcgag tgccgggctt
    13921 gccctggcaa acccgcataa aaaatgaggt gtagcattgc caaccgggat ttaaaccgac
    13981 cttttcttgt gctgacatat tatgaagata agtaagttct ttttcgttcc cgcctgacaa
    14041 ctgccagcgg cgggtattat caggtaagtt atcaccacgg caatttgtct tacaccggga
    14101 aggtgcaata tttaccgcaa tgctacccgt taatcttctg gttttatctt taggggtcag
    14161 taaccagtcg ccagctaatg atgattgttc aggttgggcg catgcagtca gcagtaatgt
    14221 ggcggtaatt agtgacacta tgacgaccag actcctgttg gtcttcattg ggatttcctt
    14281 gagctactca gtttgttgac aaagtgttcg ttgtttttgc cggatgcggc gtgaacgcct
    14341 tatccggcct acaaaatctc gtaaattcaa tatattgcac catcctcgta ggcctgataa
    14401 gcgtagcgca tcaggcaatt ctgtgtttgt catacgtaaa aaagggcgat cttccgaccg
    14461 ccctttttct tatttaatgt gtttacgcgt ttttcagaac ttcgctaaca atctcaaccg
    14521 cttctttctc aatctgcttg cgatgttctt caccgaggaa gctttcgcag tagatcttat
    14581 atgcgtcttc cgtgcctgac ggacgcgcgg cgaaccagcc gttgtcagtc atcactttca
    14641 gaccgccgat agaagcacca ttgcccggtg ccgccgtcag gcgcgcggtg atcgggtcgc
    14701 ctgccagggt gctggcgctc accatttccg gagacagctt agacagcgcc gctttttgtg
    14761 cggaagtcgc agctgcctgc aaacggttgt agctcggcgc accaaagcgt tttgccagtt
    14821 cgttgtagtg ttcctgcggg ttcttaccgg tgacagcggt gatttccgcc gccagcagac
    14881 acatgatgat gccgtctttg tcggtggacc acggcgtgcc gtcgaaacgc aggaaggaag
    14941 cccctgcgct ctcttcgccg ccaaagccga agctgccgtc gaacagacca tcaacaaacc
    15001 atttgaaacc taccgggact tctaccagct tgcggcccaa gtcattgacc acacggtcga
    15061 tcatcgcaga agaaaccagc gttttaccga cagcaacatc tttgccccac tgcggacgat
    15121 gctggaacag gtagttgatc gccaccgcca ggtagtggtt cggattcatc aaacctgccg
    15181 gagtgacgat accgtgacgg tcataatccg ggtcgttagc aaacgccaga tcgaacttat
    15241 cacgcagtgc cagcaggccc gccatcgcac actcggagga gcagtccata cggatcgcgc
    15301 cgtctttatc aaggtgcata aagcggaagg tttgatcgac ctgatcgtta acgatggtca
    15361 ggttgaggtt gtaatactcg ccaatacgct tccagtattc gataccggaa ccgcccagcg
    15421 gatcaacgcc cagcgtcagg cccgctttct gaatcgccgc catatcaacg atatcggcca
    15481 gaccttccac aaacggctgc accagatcct gctctttcac atgaccggat gccatcgctt
    15541 cgtcgaggga gatacgcttc acgcctttca ggccatcggc cagcagtgcg ttggccctgt
    15601 cttccaccac tttggtgacg ttggtatcag ccgggccacc atttggcgga ttgtacttga
    15661 taccaccatc ttccggcggg ttatgggacg gtgtaatcac gataccgtct gccagcggac
    15721 cacctttttt attgtgaacc aggatggcat tggaaacggc aggcgttgga gtgaagccat
    15781 tgttttcctg cacaatgaca tcaacgccgt tcgctgccag cacttccagt acggaaatga
    15841 acgcaggctc ggacagggcg tgagtatctt tacccacata gcaagggcca gtgatgccgt
    15901 ttttcgcacg ttcttcagca attgcctgag cgatcgccag aatgtgcggc tcgttaaagc
    15961 tgtggcgcgc tgcactgcca cggtgaccgg aagtaccgaa tttcaccgcg tgctccgcat
    16021 tccctgcttc tggtttcagt acataatatt gcgccgtcag ttgggcgacg ttaatcaaat
    16081 cactctgttg tgcaggttgg cctgcacgat tgtggattgc cattgctttg tcctttgtct
    16141 gcaacgtttt agatagttcc gcaaaccttc tcaatcaatt ccgccgggaa ttgcatcgac
    16201 tgcatgatgt gttcgatcat gctgcattta cggccggtgt tggtgttggt gatcacccaa
    16261 tacggcgtgc ctggcacatg tttcggcttg gtctgattac catttttcag cagcgtttgt
    16321 tcatctgccg caaagtaaac gcgtgtacga ccgtgcaacg attccgttgc ttcggcaaac
    16381 gcctgggcgt caagagaata tagtgtagac aacagcagca taaagcgatt gaccgctcgc
    16441 ttttgctctg cgtattcgtc agaaagcaga agttcacgca ttgcgcgaac cttgtcttta
    16501 atcgttttga ccggcttcgc ttcggcgata gcaggtgacg caacgcgaac ctctttcgtc
    16561 accggagcag caggctgtga tgcggcggaa aatttcaaca tacgccgtaa aatgtcggat
    16621 gcgctctcgc cgatatgctt agtgtggctg gcaatatagc tgtagagttc atcatcaact
    16681 tcaatcgttt tcatcttaat ccagtgcagt gtcttagctg aatacaagtc gccaagagta
    16741 tatgaataaa tcccggcagc ggatagcgtc aagcctggct tgcagaaaaa ctcggaataa
    16801 accttatttg ttgcagccct gtggcacaat ggtcaacata ataccctaac ccgacaacgc
    16861 gaaaaaaaga actttgccat gaaattgaat atccgcgcgc aaactgcaca aaaccagcac
    16921 aataattctc ccatcgttct tgtccatggt ctgtttggta gcctcgacaa ccttggcgta
    16981 ctggctcgcg atctggtaaa cgatcacaat atcatccagg ttgatatgcg taaccacggt
    17041 ctttcaccga gagatccggt aatgaattac ccggcgatgg cgcaggatct tgttgatact
    17101 ctggatgcac agcagatcga caaagcaaca tttatcggtc actccatggg cggtaaagcg
    17161 gtaatggcac ttacggcact ggcccgcgat cgcatcgata aactggtggc gatcgatatc
    17221 gcaccggtcg actatcacgt acgccgtcat gatgagattt tcgcggctat caacgcggtc
    17281 agtgaatcgg acgcacaaac tcgccagcaa gcagcagcaa taatgcgcca gcatcttaat
    17341 gaagaagggg tgattcagtt tctgttgaaa tcttttgttg acggggagtg gcgctttaac
    17401 gtgccggtat tgtgggatca gtatccgcat attgtgggtt gggagaaaat cccggcatgg
    17461 gatcaccctg ccctgtttat ccctagcggc aattctccgt atgttagcga gcagtaccgt
    17521 gatgatttac tggcacaatt tccacaggca cgggcgcatg tgattgcagg cgcgggtcac
    17581 tgggtccatg ctgaaaaacc ggatgcggta ttacgcgcta tccgtcgcta tctcaatgat
    17641 taacgcaact gattaaaaac ccagcgtccg cgtcgctttc cgcgcgtggg cgttggcgtg
    17701 actcatcgcg ctgatgtatt atggcgcgct atccatccgg gcagaggcct ggctgattgt
    17761 ttcccccgaa gtcaccaaga tcatggccaa agaacaaacg gaccgtacga cattagatct
    17821 gttcgcgcac gagcgtcgac cgggacgacc gaaaactaat ccgctttcgc gcgatgaaca
    17881 gctgcgtatt aataaacgca accagctaaa acgcgacaaa gtacgtggcc ttaagcgtgt
    17941 cgaactgaag ctgaacgcgg aagctgtcga ggcgctgaac gagctggcgg agtcgcgcaa
    18001 tatgagccgt agcgaactga tcgaagagat gttaatgcag caactggcgg cgctgcgtag
    18061 tcagggcatc gtttaaattt ccactttcat gtagcacagt gtgcagtcct gctcgtttgc
    18121 tgattccgaa agactgcctg ttctgctatg attgccttta tccgtgggca attttccacc
    18181 cccatttcaa taagtttcaa gaggttattt cactcatggc tatcactggc atctttttcg
    18241 gcagcgacac cggtaatacc gaaaatatcg caaaaatgat tcaaaaacag cttggtaaag
    18301 acgttgccga tgtccatgac attgcaaaaa gcagcaaaga agatctggaa gcttatgaca
    18361 ttctgctgct gggcatccca acctggtatt atggcgaagc gcagtgtgac tgggatgact
    18421 tcttcccgac tctcgaagag attgatttca acggcaaact ggttgcgctg tttggttgtg
    18481 gtgaccagga agattacgcc gaatatttct gcgacgcatt gggcaccatc cgcgacatca
    18541 ttgaaccgcg cggtgcaacg atcgttggtc actggccaac tgcgggctat catttcgaag
    18601 catcaaaagg tctggctgat gacgaccact ttgtcggtct ggctatcgac gaagaccgtc
    18661 agccggaact gaccgctgaa cgtgtagaaa aatgggttaa acagatttct gaagagttgc
    18721 atctcgacga aattctcaat gcctgatgtg atgcggcgta gactcatgtc tacgccgtat
    18781 taatagataa tgccaatcaa aataattgct acaaatttgt aacttttgct gttgtacctg
    18841 tacaatgtcc cggtgttcaa gtggccttgc cgttgtaaat gtaagctgtg ccacgttttt
    18901 attaacaata tttgccaggg acttgtggtt ttcatttagg cgtggcaatt ctataatgat
    18961 acgcattatc tcaagagcaa attctgtcac ttcttctaat gaagtgaacc gcttagtaac
    19021 aggacagatt ccgcatgact gataacaata ccgccctaaa gaaagctggc ctgaaagtaa
    19081 cgcttcctcg tttaaaaatc ctggaagttc ttcaggagcc ggacaaccat cacgtcagtg
    19141 cggaagattt atacaaacgt ctgatcgata tgggtgaaga aattggtctg gctacggtat
    19201 atcgcgtact gaaccagttt gacgacgctg gtatcgtcac ccgccacaat tttgaaggcg
    19261 gtaaatccgt atttgaactg acacagcaac atcaccacga tcacctgatc tgcctcgact
    19321 gcggcaaggt tatcgaattt agtgatgatt ccatcgaagc gcgtcagcgt gaaattgccg
    19381 caaaacatgg cattcgcctg actaaccaca gtctctatct ttacggtcac tgtgccgaag
    19441 gcgattgccg cgaagatgaa catgcgcacg aaggcaaata agccagcctg aatgagaaaa
    19501 agccaacctg cgggttggct tttttatgca agggaaataa gaaaagcgag agttacagct
    19561 ctcacttatt tgttattact gcgaatttcc tgccaaactt tatcacaatc ggctttcacc
    19621 gcctgatcat ttccggtttg cgttgcacgc agacactgct gataatccag tacgcggaca
    19681 ctttcctggt cggcaaaatg ctgatgttgt ttctctttct tcagcacgtt taacacgctc
    19741 tggcaggctt caattttttc tggcgaacct tgtgcggtgt tgatacaggc gctgtatgcc
    19801 tctttcagac gactgtcttc ctgtggcgcg gttgattgcg cacaagctac cagccccgat
    19861 gccattatgg cgatgagaat cagttttttc atagcaaatt cctcaaacgt gcggcaggca
    19921 caaaacctgc cgcgtcgggc atcagaagat ggtgaatggt gcgattacca taaatttcac
    19981 gtcacgctca tcctggaaga tgttgccgta accaccgccc cagcttggga tgtcggagtg
    20041 gttgtcgtat tcggtgaagt gcagtttgaa catcgtgcct ttggcgcgac cgtcctgaat
    20101 ggtgtagacc gcatccaggc tgtatgcaga ctcttcaata gtccggtttt tgtcgtagta
    20161 cgcatccgga ttgctctgcc aggtcgcagg tttagcatcc catgcgtaaa cgtaggaagc
    20221 gccgatggcg aagcctagaa gattccagtt tttcaggtca tacatcgcac cgaagaagac
    20281 cgctttttcg ccgttagcgt tgaagtcgga acggttatcc caccagatat ccaggcggcc
    20341 gttggaggaa gcgtaggctg gagtcatacg ttgcaggaag tatccctgct gaccgtcagc
    20401 cttaacccag gtgccttcga ggcgcaaatc cactacgtca gccgcccggt aaccaaaggt
    20461 caacgcttgc agccaggcgg tgccgtcata aaggtcgttg acgctgcgat cgtcaacttt
    20521 atcgcgcgta ccatagaact ggtagctggt ggttaacggg ctaccggcga tatcaaattt
    20581 gtagctggct ttggcaaaat attgatcgat atacccttcc gcctgaccaa atgccgcttc
    20641 cagtacgaag ttatttttga agtcgtattt cgccccaagg gagtgcagat aatcaacttt
    20701 ggtggtttta tcgttctgat aaaactcatc catttccaga tgccacggcg ctttgtattc
    20761 gttggtccac atgtaggaga aactcaacgc accagcatcg ccgtaatcaa aattcgcccc
    20821 ggcttccgcc ccctgataag tacctggcat aaagctccag tgcggcgcta acagcgtttg
    20881 accagttggc tgaatgtaac ctgccctcgc ccaaaccgga ccgtatttaa atttggccgc
    20941 agctttatac aggcttatac cgcttttgtc gccggaccag tcttcgtcat aggctttatt
    21001 actttttgaa aacgcgattt cgttcgggtg ggagctgtcg ccgttttccg ccatttcaat
    21061 cgccgtaaac acagcaatat caaggccgaa catatcagca gcataaccgg actgaaaatc
    21121 gaggttggca ttccaggtgg agtgagaaag gttggttttg tatttgtcgc cgtcggtaac
    21181 atctttacgg tcgcgttcac gctgccagta atatataccg ccggttaagg ttgaatcgtc
    21241 gatgaatcct tcggcgcgag cctccggcat tgccataaag cccgacattg ctgtaacacc
    21301 ggcgatagcc agcgccagcg tactacgttt gccactaaac gtacgcatgg gttaatcctc
    21361 tttgacgtat aaattgctgc accaaaggtg aacagcgaaa aaaataaaaa ttaaaaaagt
    21421 agcattgaga aaagtctcgc tgactacagg aatagactat ttttcgcgac gcgaattatc
    21481 aatctctttc tgtaaccaga atgtaagaac atgagcaacc gcacatattt tgatgatttt
    21541 tgttacaagg cttaagtttg cggttgaaag gcttgcagaa gaataaaagc gtaaatttcc
    21601 agcaagatga aagcggttac attttattta attatggttt gtgattttaa atttatttta
    21661 tggataaatt gcgaagcgga attaattcgc gaagaaaagc agaaaaaacg ccgcagagtg
    21721 cggcgtttgg gattgtttgc tatttcttgc cggatgcgac gtaaatgcct cacccggcct
    21781 ggtagaactt aaaattactc gcctactttc gcccaggtat cacgcagccc aacggtgcgg
    21841 ttaaataccg gtttttccgc tgtggaatgg cggctgtcga ggcagaagta accttcacgc
    21901 tcaaactgga atgctttacc cgcaaccgca tctttcagcg acggttcagc aaagccctgt
    21961 ttgatcacca gcgattccgg gttaatcacc gacaggaaat catccgcagc acctgggtta
    22021 ggcacgctga acagacggtc gtacagacgg atttcaaccg gcagcgcatg tgccgcgctc
    22081 acccagtgaa taacaccttt gactttacga ccatctgccg gatctttgct taaggtgtcg
    22141 gcgtcataag tacagaagat ggtggtgata ttgccttcgg catctttctc cacgcgttct
    22201 gccttaatga cgtaagcatt acgcagacgc acttctttac ccagcaccag acgtttgtac
    22261 tgcttgttag cttcttcgcg gaaatcggcg cgatcgatcc aaatctcact gctaaacggc
    22321 acctggcggc tacccatttc cggtttgttc ggatggttcg gcatggtaac catttcgcct
    22381 tcgccctgat agttttcgat aaccagtttc accggatcga taaccgccat tgcgcgcggg
    22441 gcgttttcgt tgagatcttc acggatgcag gattccagcg acgccatctc aatggtgttg
    22501 tcctgcctgg tcacgccgat gcgtttgcag aactcacgaa tagaagcagc agtgtaacca
    22561 cgacgacgca gaccggaaat ggtcggcata cgcgggtcat cccagccttc aacgtgcttg
    22621 tcggtcacca gcaggttcag cttacgcttg gacatcacag tgtattccag attcaggcgc
    22681 gagaattcgt actggcgcgg gtgaacagga atggtgatgt tgtccagcac ccagtcgtac
    22741 aggcgacggt tgtcctggaa ctcaagcgta cacagagagt gcgtaatacc ttccagggca
    22801 tcgctgatgc agtgggtgaa gtcgtacatc gggtagatgc accacttgtt gccagtctgg
    22861 tggtgttcag caaatttaat gcggtacagc accggatcgc gcatcacgat aaacggtgaa
    22921 gccatgtcga ttttcgcacg caggcaggct ttaccttctt caaaaccacc ggcacgcatt
    22981 ttttcgaaca gcgccaggtt ctcttcaacg ctgcggtcgc ggtacgggct gtttttaccc
    23041 ggttgcgtca gggtgccgcg gtattcgcgg atctgttccg gcgtcagttc atcaacgtac
    23101 gccaggcctt tattgatcag ttcgatcgca taggcgtgga gctgatcaaa ataatcggag
    23161 gagtaacgga cgttaccaga ccagtgaaaa cctaaccact ctacgtcgtt tttgatcgac
    23221 tcaacatact cgatatcttc ttttaccggg ttagtgtcgt cgaaacgcag gttgcactgg
    23281 cctttatagt cctgggcgat cccgaagttc aggcagatag atttcgcatg gccaatatgc
    23341 agatagccat tcggctccgg cgggaaacgg gtgtgtactg tggtgtgctt accactggcc
    23401 agatcttcat cgatgatctg acggataaag ttagtcgggc gggcttctgc ctcactcatc
    23461 gtggattcct caaagcgtaa acaacgtata acggcgtatg atcttataag cggaacaggc
    23521 tgacaactgt tagtttttta aaattgataa tctaacaagg attatgggga tgattgatga
    23581 aaaaaaaagc ggcagagaag atctccaccg cttgtcattg ttggatgcga cgctcaagcg
    23641 tcgcatcagg cataaagcag attacttttt gatttcatac agcggtgttt gacccgccac
    23701 aacatggccc tgagctttaa tgatcaagcc actgaaatcg tcgatattgc tgcaaaccac
    23761 cgggctaatc atcgagcggg cgttagcgtt caggtaatcc agatccattt ccagaatcgg
    23821 ttgccctgcg cttacctgcg caccctcttc caccagacgt ttaaagcctt taccttccag
    23881 cgctacggtg tcgataccca tatggacgac gatctccgcg cctttttcgg tttccaggca
    23941 gaacgcgtgg ttggtgttga agattttcac gattgtccct gcggctggtg atacgacgat
    24001 tttatctgtc ggtttcaccg ccacaccgtc acccaccgct ttgctggcga atgcttcgtc
    24061 aggaacctga tccagtgcca cgacatcacc ggtaatcggc gataccagct ccgcgataga
    24121 taccgcgttt ggtacagcct gcggttttgc tacaggcgcg gcagttgacg gagttgcttc
    24181 agctgacgca gcggctaccg gaccacgggc aacgactttc ttcatcgcat cgccgatgga
    24241 ttctgctttc gcgccaacaa tcacctgaat agtctgtttg ttcagtttca ctacaccaga
    24301 agcacccaga cgtttacaca tcgtatcgtt gacgcgggca gagtcagcca cggtcaggcg
    24361 cagacgggtg atacaggcgt caattgcttt caggttgtca gtgccgccaa ccgcagcaat
    24421 atagttggtc gccagttgat tgaggccttc ttcagtgttg ctgttggctt cttcagtaac
    24481 gatctcatct tctttatctt cacgacccgg cgttttcagg ttgaacatgc ggataaccaa
    24541 actgaacacc acgaagtaga tagcgaagaa gacaacaccc atcaccagca gcatccagac
    24601 gttctggctg gcggccggca ggttatacat caacgcgtag tcgatagccc ccgcagagaa
    24661 agagaagcca gcatggatac ccagcagtgt tgccacaaac aggctgatac cggtcagcag
    24721 tgcgtgcagg aggtacagca gcggtgcaag gaacatgaac aggaattcca gcggctcagt
    24781 cacaccggtc aggaacgcag taacagcaac agaaagcagc atcccgccaa ccatcggacg
    24841 acgctctttc ggtgctgcga agtacatcgc cagcgccgca cccggcagac cgaacatcat
    24901 aatcgggaag aagccggaca tgaacatccc cgcggtgccg tcaccggcat agaagcggtt
    24961 gatatcaccg tggaaaaccg tacccgccgc gttggtgaat tcaccaatct ggaaccaggc
    25021 gatggtgttc agcacctgat gcagaccggt tgggatcagc agacggttga tgaaaccaaa
    25081 gataccggaa cccagcgcgc ccgcagaaac gatccactcg cctcctgcat ggatagcgtg
    25141 ctgtaccggc ggccagacgt aaccaaaaat ggccgccagc accaggcaga agaagccggt
    25201 ggcaatcggc acaaagcgtt tgccgccgaa gaagctcagg aagtccggca gtttaatatc
    25261 ggaccaacgg ttataggctg cgccaccaac cagaccggta atgatacccg ccagtacacc
    25321 catgtttatt tctgggttga tggtcaccat cgctttggtt aacacaaagt aacctaccgc
    25381 acccgccagc gccgccgcac ctgcgctgtc tttcgaccag ctggatgcca caccgatggc
    25441 gaagattaat gcgaggttat caaaaatcgc accgcccgcc tgggcaataa acgcaacgtt
    25501 aagtaaatct ggctgaccga atcgcagcaa cagtgccgcc accggcagca ccgcgatagg
    25561 gagctgtaac gccctaccga gtcgctggaa aaaacctaaa atattcatct tattccccct
    25621 acgagaaccc tatttggctc gtttaaagcc gtatttttat tttgctgcaa attgtactgc
    25681 cgatgttctg taatcagatt gttagatcat ctgctacaga gtgtgtgaaa atttaattcg
    25741 tatcgcaaat taaacgcgtg tcttttgtga gttttgtcac caaatatcgt tatcatcact
    25801 cccttttact ggctaaacca gaaaacttat tttatcattc aaaaaatcag gtcggattga
    25861 cgcctgtctg cgcaaatcca agttacgctt aaagatgcct aatccgccaa cggcttacat
    25921 tttacttatt gaggtgaata atgagactga tccccctgac taccgctgaa caggtcggca
    25981 aatgggctgc tcgccatatc gtcaatcgta tcaatgcgtt caaaccgact gccgatcgtc
    26041 cgtttgttct gggcctgcca actggcggca cgccgatgac cacctataaa gcgttagtcg
    26101 aaatgcataa agcaggccag gtcagcttta agcacgttgt caccttcaac atggacgaat
    26161 atgtcggtct gccgaaagag catccggaaa gctactacag ctttatgcac cgtaatttct
    26221 tcgatcacgt tgatattcca gcagaaaaca tcaaccttct caacggcaac gccccggata
    26281 tcgacgccga atgccgccag tatgaagaaa aaatccgttc ttacggaaaa attcatctgt
    26341 ttatgggcgg tgtaggtaac gacggccata ttgcatttaa cgaaccggcg tcttctctgg
    26401 cttctcgtac tcgtatcaaa accctgactc atgacactcg cgtcgcgaac tctcgtttct
    26461 ttgataacga tgtcaatcag gtgccaaaat atgccctgac tgtcggtgtt ggtacattgc
    26521 tggatgccga agaagtgatg attctggtgc tgggtagcca gaaagcactg gcactgcagg
    26581 ctgcagttga aggttgcgtg aaccacatgt ggaccatcag ctgtctgcaa ctgcatccaa
    26641 aagcgatcat ggtgtgcgat gaaccttcca ccatggagct gaaagttaag actttaagat
    26701 atttcaatga attagaagca gaaaatatca aaggtctgta attgttatcc ctgccctggc
    26761 tccttgctca gggcaatatt ttttaaaatc gggggtcaga atgtatgcat taacccaggg
    26821 ccggatcttt accggccacg aatttcttga tgaccacgcg gttgttatcg ctgatggcct
    26881 gattaaaagc gtctgtccgg tagcggaact gccgccagag atcgaacaac gttcactgaa
    26941 cggggccatt ctctcccccg gttttatcga tgtgcagtta aacggctgcg gcggcgtaca
    27001 gtttaacgac accgctgaag cggtcagcgt ggaaacgctg gaaatcatgc agaaagccaa
    27061 tgagaaatca ggctgtacta actatctgcc gacgcttatc accaccagcg atgagctgat
    27121 gaaacagggc gtgcgcgtta tgcgcgagta cctggcaaga catccgaatc aggcgttagg
    27181 tctgcatctg gaaggtccgt ggctgaatct ggtaaaaaaa ggcacccata atccgaattt
    27241 tgtgcgtaag cctgatgccg cgctggtcga tttcctgtgt gaaaacgccg acgtcattac
    27301 caaagtgacc ctggcaccgg aaatggttcc tgcggaagtc atcagcaaac tggcaaatgc
    27361 cgggattgtg gtttctgccg gtcactccaa cgcgacgttg aaagaagcga aagccggttt
    27421 ccgcgcgggg attacctttg ccacccatct gtacaacgcg atgccgtata ttaccggtcg
    27481 tgaaccgggc ctggcgggcg cgatcctcga cgaagctgac atttattgcg gtattatcgc
    27541 tgatggcctg catgttgatt acgccaacat tcgtaacgct aaacgcctta aaggcgacaa
    27601 actgtgtctg gttaccgacg ccaccgcgcc agcaggtgcc aacattgaac agttcatttt
    27661 tgcgggtaaa acaatatact accgtaacgg actttgtgtg gatgagaacg gtacgttaag
    27721 cggttcatcc ttaaccatga ttgaaggcgt gcgtaatctg gtcgaacatt gcggtatcgc
    27781 actggatgaa gtgctgcgta tggcgacgct ctatccggcg cgtgcgattg gcgttgagaa
    27841 acgtctcggc acactcgccg caggtaaagt agccaacctg accgcattca cacctgattt
    27901 taaaatcacc aagaccatcg ttaacggtaa cgaggtcgta actcaataag agaaagtatg
    27961 acaccaggcg gacaagctca gataggtaat gttgatctcg taaaacagct taacagcgcg
    28021 gcggtttatc gcctgattga ccagtacggg ccaatctcgc ggattcagat tgccgagcaa
    28081 agccagcttg cccccgccag cgtaaccaaa attacgcgtc agcttatcga acgcgggctg
    28141 atcaaagaag ttgatcagca ggcctccacc gggggccgcc gcgctatctc catcgtcacc
    28201 gaaacccgca atttccacgc aatcggcgta cggcttggtc gtcacgacgc caccatcacc
    28261 ctgtttgatc tcagcagcaa agtgctggca gaagaacatt acccgctgcc ggaacgtacc
    28321 cagcaaacgc tggaacatgc cctgttgaat gccattgctc agtttattga tagctaccag
    28381 cgcaaactgc gcgagctgat cgcgatttcg gtgatcctgc cagggcttgt tgacccggac
    28441 agcggcaaaa ttcattacat gccgcatatt caggtagaaa actgggggct ggtagaagct
    28501 ctggaagaac gttttaaagt gacctgtttc gttggtcacg atatccgtag tctggcgctg
    28561 gcggagcact acttcggtgc aagtcaggat tgcgaagact ccattctggt gcgtgtccat
    28621 cgcggaaccg gggccgggat tatctctaac gggcgcattt ttattggccg caacggtaac
    28681 gtcggtgaaa ttggccatat tcaggtcgaa ccgctgggtg aacgctgcca ctgcggcaac
    28741 tttggctgcc tggaaactat cgccgccaac gctgccattg aacaacgggt gttgaatctg
    28801 ttaaagcagg gctaccagag ccgcgtgccg ctggacgact gcaccatcaa aactatctgc
    28861 aaagccgcga acaaaggcga tagtctggcg tcggaagtaa ttgagtatgt cggtcgtcat
    28921 ctgggtaaaa ccatcgccat tgctatcaac ttatttaatc cgcaaaaaat tgttattgcc
    28981 ggtgaaatca ccgaagccga taaagtgctg ctccctgcta ttgaaagctg cattaatacc
    29041 caggcgctga aggcgtttcg cactaatctg ccggtggtac gttctgagct ggatcaccgc
    29101 tcggcaatcg gcgcttttgc gctggtaaaa cgcgccatgc tcaacggtat tttgctccag
    29161 catttgctgg aaaattaatg tgcttttata gtggcgctta ttgttgtcaa tattctgggt
    29221 agtccatgac cattaaaaat gtaatttgcg atatcgatgg cgtgctgatg cacgataacg
    29281 tcgccgtacc gggtgcagcg gaatttttgc acgggattat ggataaaggc ctgccgctgg
    29341 tgttgctgac caactatcct tcgcagactg ggcaagatct ggcgaaccgc tttgccaccg
    29401 caggtgtcga tgtacctgac agcgtgtttt atacctctgc gatggcgact gccgatttcc
    29461 tgcgtcgcca ggaaggcaag aaagcgtatg tggtgggcga aggcgcactg attcatgaac
    29521 tgtacaaagc cggtttcact attaccgatg tgaaccctga tttcgtgatt gttggcgaaa
    29581 cgagttccta caactgggac atgatgcata aagcagccta tttcgtcgct aacggtgcac
    29641 gttttatcgc caccaatccg gacacccacg ggcgcggttt ttatcccgcg tgtggcgcgt
    29701 tgtgtgcagg catcgaaaaa atctccgggc gtaaaccgtt ctatgttggt aaaccgagtc
    29761 cgtggatcat ccgcgcggca ttaaacaaaa tgcaggcgca ttcggaagaa acggtgattg
    29821 tcggcgataa cctgcgtacc gatattctgg cgggcttcca ggcaggtctg gaaacgattc
    29881 tggtgctttc tggtgtttca tcgctcgacg atatcgacag tatgccgttc cgcccaagct
    29941 ggatttaccc gtcggtcgct gaaatcgacg ttatctgaat agcaaccacg tctgcggacg
    30001 tggttggctc tgatgacaaa cgccaaactg cctgatgcgc tacgcttatc aggcctacgc
    30061 agctcctgca atatattgaa ttttcatgct tttgtaggcc ggataaggcg ttcacgccgc
    30121 atccggcatg aacaaattgc actttgtcag caatttggcc cccgtaaaat acaaacattc
    30181 aataaaaccc gctgaaaatt atcgattcat caataaatat atcctcacac cagacctttt
    30241 ttcaccaatc gacaatcacc attacgtttt ttattttttc accgccaaat cgcttgcgca
    30301 cagtgctgct ttgcggcatt tttttaaaca agcaaacaca acaagcaaca aataccagat
    30361 taacggagaa ggttatgtgt tcaatttttg gcgtattcga tatcaaaaca gacgcagttg
    30421 agctgcgtaa gaaagcactc gagctgtcac gcctgatgcg tcatcgtggc ccggactggt
    30481 ccggtattta tgccagcgat aacgccattc tcgctcacga acgtctgtca attgttgacg
    30541 ttaacgcggg ggcgcaacct ctctacaacc aacaaaaaac ccacgtactg gcggtaaacg
    30601 gtgaaatcta caaccaccag gcattgcgcg ctgaatatgg cgatcgttat cagttccaga
    30661 cagggtctga ctgtgaagtg atcctcgcgc tgtatcagga aaaagggccg gaatttctcg
    30721 acgacttgca gggcatgttt gcctttgccc tgtacgacag cgaaaaagat gcctacctga
    30781 ttggtcgcga ccatctgggg atcatcccac tgtatatggg ctatgacgaa cacggtcagc
    30841 tgtatgtggc ctcagaaatg aaatcgctgg tgccagtttg ccgcacgatt aaagagttcc
    30901 cggcggggag ctatttgtgg agccaggacg gcgaaatccg ttcttattat catcgcgact
    30961 ggttcgactt tgatgcagtg aaagataacg tgaccgacaa aaacgagctg cgtcaggctc
    31021 tggaagattc cgttaaaagc catctgatgt ctgatgtgcc ttacggtgtg ctgctttctg
    31081 gtggtctgga ttcctcaatt atttccgcta tcaccaagaa atacgcagcc cgtcgcgtgg
    31141 aagatcagga acgctctgaa gcctggtggc cgcagttaca ctcctttgct gtaggtctgc
    31201 cgggttcacc ggatcttaaa gcagcccagg aagtggcaaa ccatctgggc acggtgcatc
    31261 acgaaattca cttcactgta caggaaggtc tggatgccat ccgcgacgtg atttaccaca
    31321 tcgaaactta tgatgtgacc actattcgcg cttcaacacc gatgtattta atgtcgcgta
    31381 agatcaaggc gatgggcatt aaaatggtgc tgtccggtga aggttctgat gaagtgtttg
    31441 gcggttatct ttacttccat aaagcgccca acgctaaaga actgcatgaa gagacggtgc
    31501 gtaaactgct ggccctgcat atgtatgact gcgcgcgcgc caacaaagcg atgtcagcct
    31561 ggggcgtgga agcacgcgtt ccgttcctcg acaaaaaatt ccttgatgtg gcgatgcgca
    31621 ttaacccgca ggataaaatg tgcggtaacg gcaaaatgga aaaacacatc ctgcgtgaat
    31681 gttttgagtc atacctgccc gcaagcgtgg cctggcggca gaaagagcag ttctccgatg
    31741 gcgtcggtta cagttggatc gacaccctga aagaagtggc ggcgcagcag gtttctaatc
    31801 agcaactgga aactgcccgc ttccgcttcc cgtacaacac gccaacctca aaagaagcgt
    31861 atctgtaccg ggagatcttt gaagaactgt tcccgcttcc gagcgccgct gagtgcgtgc
    31921 ctggcggtcc ttccgtcgcg tgttcttccg ctaaagcgat cgaatgggat gaagcgttca
    31981 agaaaatgga cgatccatct ggtcgtgcgg ttggtgttca ccagtcggca tataagtaag
    32041 aaatgcgaaa cagccccggt gaaatccggg gctgtttcag ttattgaggt gcttgttgat
    32101 tctgatatgc agtaaggaaa tgttccgggt ttgccacatc actgtttgac aactcatcac
    32161 tgtaggccag tatttcatag attaatttcc caccactatt gttgaattcc gaatttcatc
    32221 ctgtacgaca aaagaatggc tgtagggtgg ggaaaaaaca caaagtaaac aataattgac
    32281 gaatatagcg ccacgctgtt cgcaacctaa ccaaatagtc actttcgagc aattttcctt
    32341 gaaaaagagg ttgacgctgc aaggctctat acgcataatg cgccccgcaa cgccgataag
    32401 gtatcgcgaa aaaaaagatg gctacgtagc tcagttggtt agagcacatc actcataatg
    32461 atggggtcac aggttcgaat cccgtcgtag ccaccatctt tttggcggga gtggcgaaat
    32521 tggtagacgc accagattta ggttctggcg ccgcaaggtg tgcgagttca agtctcgcct
    32581 cccgcaccat tcaccagaaa gtgttgtacg gatggggtat cgccaagcgg taaggcaccg
    32641 gtttttgata ccggcattcc ctggttcgaa tccaggtacc ccagccatct tcttcgagta
    32701 agcggttcac cgcccggtta ttggggtatc gccaagcggt aaggcaccgg tttttgatac
    32761 cggcattccc tggttcgaat ccaggtaccc cagccataga agaaacaatc tggctacgta
    32821 gctcagttgg ttagagcaca tcactcataa tgatggggtc acaggttcga atcccgtcgt
    32881 agccaccaaa ttctgaatgt gtcgaatacg ttcggcaaat tcaaaaacca atttgttggg
    32941 gtatcgccaa gcggtaaggc accggattct gattccggca ttccgaggtt cgaaccctcg
    33001 taccccagcc aatttattca agacgcttac atcgtaagtg cacccagttg gggtatcgcc
    33061 aagcggtaag gcaccggatt ctgattccgg cattccgagg ttcgaatcct cgtaccccag
    33121 ccacattaaa aaagctcgct tcggcgagct ttttgctttt ctgcgttcat tcaatgtcga
    33181 atgcgatgtt gacacgtctt atccttcaat gtcggatgcg acgctgccgc gtcttatccg
    33241 acctacggtt ggcacgcatc cggcaatgtt gtaaggctac aaccctaacg catatttcag
    33301 cgcctgacgt ttcaacacgc cagcacgctc tgccgccatt aacccgagat tacgcacaaa
    33361 acgcagcggc ggcagattat tactgaatcc ggcataaaac agatccatac cactttgcat
    33421 aatgaagtta tccgccatgc gccgcatctg gtaacgcttg aggacaggat aactggccca
    33481 cgcttcaccg taactgcggg cattcaccag aacatcaatc agggcatcga catcacgata
    33541 accaagattc accccctgcc ccgccagcgg atggatggta tgcgcggcat cgcccaccag
    33601 cgcaagcccc ggctgcacat actgcaacgc atgtcggcgc gtcagcggaa acgcaccagc
    33661 ggcaagcggt gtaacgtaac ccagacgcga cgggaaatgc ttcgcgattt ccgcctggag
    33721 ttgcgccata ttcatattct gcaactggcg aatacgcgcc ggagagtcat accacaccag
    33781 cgatgcccag ttatcaaaca acggcagaaa cgcacgcggt ccgtccgggg taaattgctg
    33841 ccaggtgctg tcgccgggat cgttctcaca ctgtacgcta atcaacatgc acgactgcgc
    33901 atactgccag gcatgaacgc caattcccgc catctgccgc acctgagaat ttgcgccgtc
    33961 ggcaccaatc accagtttcg cgcggatcgt ttcaccgccc ttcagttcca gctcctgaag
    34021 atcattatct cgatgtaatg caatcagcga gcctggcaca cgtaacgtta ctttcggatg
    34081 cgcttccagc gcctgccaca gcgcctgttg cagtacggtg ttttccacca tatagccaag
    34141 caacggtagc ttaagttcag cggcgtcaaa caccacatgc gccgtttccc actcccacgt
    34201 ttccagtctg cggtaaggat ggcaacgcat agcctgtact gcatcccaga cccctaaccc
    34261 tttaagcaat gataccgatg cggcgctgat cgccgagatc cgcacgtccg gttggctatc
    34321 agcgacaaac ggtgcaggtt ctgcgtgctc gatcaccgtt accgaaaatc cgtgctgtgc
    34381 cagccccagc gccagcgcgc cgccgaccat tcctccgccg acaatggcaa tttccgttgg
    34441 ttgatttgtc atggtcaatc atcctgttag caatatgctt taagtttaca ggatttttac
    34501 ccccaagggc tgataacgct catactggcc acaacggcag caaagcatta cactatgcgc
    34561 cctgcattcc tggctactat ttcgcaagag caagtcgatg accaaaaaac tccatattaa
    34621 aacctggggc tgtcagatga acgagtacga ttcatcgaag atggccgatc tgctggatgc
    34681 cacccacggc tatcaactga ccgacgtggc ggaagaagcg gatgtgctgc tgctgaacac
    34741 ctgctcaatc cgcgagaagg ctcaggaaaa agtcttccat cagttgggtc gctggaaact
    34801 gttaaaagag aagaatccag acctgattat cggcgtcggt ggctgcgtgg catcgcaaga
    34861 aggcgagcac attcgccagc gcgcccacta tgtcgatatt atttttgggc cgcaaacgct
    34921 gcaccgtctg ccggagatga tcaactccgt gcgcggcgac cgcagcccgg ttgtagatat
    34981 cagcttcccg gaaatcgaga agtttgaccg tctaccggaa ccgcgcgccg aagggccgac
    35041 cgcgtttgtc tccatcatgg aaggctgcaa taaatattgc acctactgcg tggtgcctta
    35101 cacccgtggt gaagaggtaa gccgtccgtc tgacgatatt ctgtttgaga ttgcccagct
    35161 tgcggctcag ggcgtgcgtg aagtcaacct gctcggtcag aacgtgaacg cctggcgtgg
    35221 tgaaaactac gacggctcca ccggatcgtt tgccgatctg ctgcgtctgg ttgctgcgat
    35281 cgacgggatc gatcgtattc gctttaccac cagccatccg atcgaattca ccgacgatat
    35341 catcgaagtg tatcgcgaca cgccggagct ggtgagcttc ctgcatctgc cggtacagag
    35401 cggttccgat cgcattctga acctgatggg ccgtactcat acggcactgg agtacaaagc
    35461 gatcatccgt aaactgcgtg cggcgcgtcc agatattcag atcagttctg atttcatcgt
    35521 tggcttccct ggcgaaacca ccgaagactt cgagaaaacg atgaagctga ttgccgacgt
    35581 caatttcgac atgagctaca gctttatctt ctctgcacgt ccgggtacac cagccgccga
    35641 tatggttgat gatgttccgg aagaagagaa gaagcagcgt ctgtatattc tgcaagaacg
    35701 tatcaatcag caagcgatgg catggagccg ccggatgctc ggcaccaccc agcgtattct
    35761 ggtagaaggg acttcgcgta agagcatcat ggagctttcc gggcgtaccg aaaataaccg
    35821 cgtggtcaac ttcgagggca caccggatat gatcggtaaa ttcgtcgatg tagaaattac
    35881 cgacgtctac ccgaactctc tgcgcggtaa agtggtgcgt actgaagatg aaatgggcct
    35941 gcgcgtggca gaaacaccgg aatcggtgat tgcccgtacc cgcaaagaaa acgaccttgg
    36001 cgtgggttat tatcagccgt aattctcagg cccgccgttc cggtgggcct tgttttttct
    36061 ctctttatcc ccatctttat cgcaatgctt gcgccttttt cctgtggcgt gaataatttc
    36121 cttataggcc ggtgaatgtt cagcttccgg cggcatacag ataagaggaa cggtttgaac
    36181 atagacactc gcgaaatcac cctggagcca gcagacaacg cgcgtctgtt gagcctgtgc
    36241 ggcccgtttg atgacaacat caagcagctc gaacgccgtc tcggcatcga gatcaatcgc
    36301 cgcgacaacc actttaaact gaccggccgt ccgatttgcg tcaccgctgc ggcagacatt
    36361 ctgcgtagcc tgtatgtcga tacagccccg atgcgcggtc agattcagga tatcgaaccg
    36421 gaacagatcc accttacgat taaagaagcg cgagtactgg agcaaagtgc ggagagcgtg
    36481 ccggagtacg gcaaagcggt caatatcaaa accaaacgcg gcgtaattaa gccgcgcacg
    36541 ccaaaccagg cgcagtacat cgccaatatt ctcgaccatg acattacctt cggcgttggc
    36601 ccggcgggta cgggtaaaac ctacctggca gtggctgcgg cagttgatgc cctggagcgt
    36661 caggagattc gccgtattct gctgactcgt ccggcggtcg aagccggtga gaaactgggc
    36721 ttcctgcctg gcgatttaag ccagaaagta gacccgtatc tgcgcccact gtacgacgcg
    36781 ctgtttgaaa tgctgggctt tgagaaagtt gagaaactga ttgagcgcaa cgttattgaa
    36841 gtcgcgccgc tggcctatat gcgtggtcgt acgctgaacg acgcgtttat cattctcgat
    36901 gagagccaga acaccaccat cgaacagatg aagatgttcc tgacccgtat cggttttaac
    36961 tcaaaagcgg ttatcaccgg cgacgtcaca cagatcgacc tgccgcgtaa tactaaatca
    37021 ggcttacgtc acgccatcga agtactggcc gatgtcgaag agatcagctt taacttcttc
    37081 cacagcgaag acgtggttcg tcaccctgtg gtggcgcgta tcgttaacgc ctatgaagcc
    37141 tgggaagaag ccgaacaaaa acgaaaagcg gcgctggcgg cagaacgcaa gcgcgaagaa
    37201 caggaacaaa aatgagtcag gtgatcctcg atttacaact ggcatgtgaa gataattccg
    37261 ggttaccgga agagagccag tttcaaacat ggctgaatgc ggtgatcccg cagtttcagg
    37321 aagaatcgga agtgactatt cgcgtggtcg ataccgccga aagccacagt ctgaatctga
    37381 cctatcgcgg taaggataag ccgaccaacg tgctctcctt cccgtttgaa gtgccgcctg
    37441 gcatggaaat gtcgctactg ggcgatctgg ttatctgccg tcaggtggtt gagaaggaag
    37501 ctcaggagca aggcaaacca ctggaggcgc actgggcgca tatggtggtg cacggcagtc
    37561 tgcatttgtt aggttacgat cacatcgaag atgacgaagc agaagaaatg gaagccctcg
    37621 aaacagagat tatgcttgct ctgggctatg aggatccgta cattgccgag aaagaataat
    37681 ttgccaggca tttgactggc agacgtcccc gccgttggtg attaacgacg gcgttttgat
    37741 taactaacat gagaacccat acgacgccat gagcgacgac aattcacaca gtagtgacac
    37801 gataagcaac aagaagggat ttttctccct gttactcagc caacttttcc acggtgaacc
    37861 gaaaaaccgt gacgaactgc tggcgctgat ccgtgattcc gggcagaacg accttatcga
    37921 cgaagatacg cgcgatatgc tcgaaggggt gatggacatc gcagaccaac gcgttcgcga
    37981 catcatgatc ccccgctccc agatgattac cctgaaacgc aaccagacgc tggacgaatg
    38041 ccttgatgtc atcatcgagt ccgcccactc acgtttcccg gtgattagcg aagacaaaga
    38101 tcacattgaa gggattctga tggcgaaaga cttgctgccg tttatgcgca gcgatgctga
    38161 agccttcagc atggacaaag tgttacgtca ggcggttgtc gttcctgaaa gtaagcgcgt
    38221 agaccggatg ctgaaagagt ttcgctctca gcgttaccac atggcgatcg tcattgacga
    38281 attcggtggg gtttccggtc tggtgaccat tgaagacatc ctggaactga ttgttggtga
    38341 gattgaagac gaatatgacg aagaagatga tatcgacttc cgtcagctga gtcgtcatac
    38401 ctggaccgtg cgcgcactgg cttccattga agacttcaac gaagcgttcg gcacccactt
    38461 tagcgatgaa gaagtcgaca ctatcggtgg tctggtgatg caggcgtttg ggcatcttcc
    38521 ggcgcgtggc gaaactatcg acatcgacgg ttaccagttc aaagtggcga tggccgacag
    38581 tcgacgtatt attcaggttc atgtcaaaat cccggatgac tcaccccagc cgaagctgga
    38641 tgaataaaac cgaaactgga tagataacta catggctttt gcctcattaa ttgaacgcca
    38701 gcgcattcgc ctgctgctgg cgttattatt cggtgcctgc ggaacgctgg ccttctctcc
    38761 ttacgacgtc tggcctgcgg cgattatttc gttgatgggg cttcaggcgt tgacctttaa
    38821 ccgccgtcca ctccagtctg ccgctattgg cttttgctgg ggatttggcc tctttggcag
    38881 cggtattaac tgggtctatg tcagcatcgc gacctttggc ggaatgcctg gcccggttaa
    38941 catcttcctg gtggtgctgc tggcggcgta tttgtcgctg tataccggac tgtttgctgg
    39001 cgtgctgtcg cgtctgtggc cgaaaaccac ctggctgcgc gtggcgattg ccgcccctgc
    39061 tctctggcaa gtgaccgagt ttctgcgcgg ttgggtactg acaggcttcc cgtggttaca
    39121 gttcggctat agccagattg atggcccgtt aaaagggctg gcaccgataa tgggcgtgga
    39181 agccattaac ttcctgctga tgatggttag tggcctgctg gcactggcgt tggtcaaacg
    39241 caactggcgt ccgctggtgg tggccgtcgt gctgtttgcc ctacccttcc cgctgcgtta
    39301 catccaatgg tttaccccgc aaccggagaa aaccattcag gtttcgatgg ttcagggcga
    39361 tattccgcaa tcactgaaat gggatggaga tcagcttctt aatacgctga agatttacta
    39421 caacgcaacg gctccgctga tgggcaaatc atcgttgatt atctggccgg agtcggcgat
    39481 aaccgatctg gaaattaatc agcaaccgtt cctcaaagca ctggacggtg agttgcgcga
    39541 taaaggtagc tcgctggtaa ccgggattgt cgacgcgcgt ctcaataagc agaaccgcta
    39601 cgatacctac aacaccatca tcacactggg taaaggtgca ccgtacagct acgaatcagc
    39661 cgatcgctat aacaaaaacc atctggtgcc gtttggcgag tttgtcccgc tggagtcgat
    39721 tctgcgtccg ttagcaccgt tctttgatct gccgatgtcg tcgttcagcc gtgggccata
    39781 tatccagccg ccgctgtcag taaatggtat tgagcttact gcggctattt gctacgagat
    39841 cattctcggc gagcaagtgc gcgataactt ccgcccggat accgactatc tgctgactat
    39901 ctccaacgat gcgtggtttg gtaaatctat tggtccatgg caacacttcc agatggcgcg
    39961 aatgcgtgcg ctggagctgg cgcgcccact gttgcgcagc accaacaacg gcattacggc
    40021 ggtgattggc ccgcagggtg agattcaggc gatgatcccg cagttcaccc gcgaggtgtt
    40081 aaccactaat gtgacaccga ccaccggact cacaccgtat gcacgtaccg gcaactggcc
    40141 actgtgggtg ctgacggcac tgtttggttt tgccgctgtg ttgatgagtc tgcgagcacg
    40201 taaacgttga tgtgcctgat gtatcctgca tgagcaaaac gtactttctc attgagcttt
    40261 ggggcatggt tatcatgccc ctttttctta cggttcaggg atacaagcca cattgccata
    40321 ttggggatga cgaataattg cctgcggatc aagcgagcgc gtcctgtcca tttggatcaa
    40381 cccgttcttc gccatgacaa atatttttct accatccgct gaa
//
LOCUS       DAJVUK010000016        39395 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.016, whole genome shotgun sequence.
ACCESSION   DAJVUK010000016 DAJVUK010000000
VERSION     DAJVUK010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39395
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.016"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(13..870)
                     /gene="murI"
                     /locus_tag="OQQ57_000840"
     CDS             complement(13..870)
                     /gene="murI"
                     /locus_tag="OQQ57_000840"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HCS1955689.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
     gene            complement(815..2663)
                     /gene="btuB"
                     /locus_tag="OQQ57_000841"
                     /pseudo
     CDS             complement(815..2663)
                     /gene="btuB"
                     /locus_tag="OQQ57_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
     regulatory      complement(2717..2907)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3021..4121
                     /gene="trmA"
                     /locus_tag="OQQ57_000842"
     CDS             3021..4121
                     /gene="trmA"
                     /locus_tag="OQQ57_000842"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HCS1955690.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPCILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     gene            complement(4161..4520)
                     /locus_tag="OQQ57_000843"
     CDS             complement(4161..4520)
                     /locus_tag="OQQ57_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HCS1955691.1"
                     /translation="MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(4520..5170)
                     /gene="fabR"
                     /locus_tag="OQQ57_000844"
     CDS             complement(4520..5170)
                     /gene="fabR"
                     /locus_tag="OQQ57_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HCS1955692.1"
                     /translation="MMGIRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE"
     gene            5491..6891
                     /gene="sthA"
                     /locus_tag="OQQ57_000845"
     CDS             5491..6891
                     /gene="sthA"
                     /locus_tag="OQQ57_000845"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HCS1955693.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLVLDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            complement(6874..7791)
                     /gene="oxyR"
                     /locus_tag="OQQ57_000846"
     CDS             complement(6874..7791)
                     /gene="oxyR"
                     /locus_tag="OQQ57_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HCS1955694.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(8058..9431)
                     /gene="argH"
                     /locus_tag="OQQ57_000847"
     CDS             complement(8058..9431)
                     /gene="argH"
                     /locus_tag="OQQ57_000847"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HCS1955695.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDAFDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEDLPLDELQKFSHVIGEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLG"
     gene            complement(9492..10268)
                     /gene="argB"
                     /locus_tag="OQQ57_000848"
     CDS             complement(9492..10268)
                     /gene="argB"
                     /locus_tag="OQQ57_000848"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HCS1955696.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(10276..11280)
                     /gene="argC"
                     /locus_tag="OQQ57_000849"
     CDS             complement(10276..11280)
                     /gene="argC"
                     /locus_tag="OQQ57_000849"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HCS1955697.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPAINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            11434..12585
                     /gene="argE"
                     /locus_tag="OQQ57_000850"
     CDS             11434..12585
                     /gene="argE"
                     /locus_tag="OQQ57_000850"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HCS1955698.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDIDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNG
                     LLNDALAPVIERWPGRLTVDELHPPIPGHECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELIIQVIHHFCWH"
     gene            12937..15588
                     /gene="ppc"
                     /locus_tag="OQQ57_000851"
     CDS             12937..15588
                     /gene="ppc"
                     /locus_tag="OQQ57_000851"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004203687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HCS1955699.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEAPPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYKSWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIR
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYL
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            15771..17504
                     /locus_tag="OQQ57_000852"
     CDS             15771..17504
                     /locus_tag="OQQ57_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HCS1955700.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQDVLNDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLSAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGDQVGNQ"
     gene            17719..18528
                     /locus_tag="OQQ57_000853"
     CDS             17719..18528
                     /locus_tag="OQQ57_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1955701.1"
                     /translation="MYHDISYLLSRLINGPVPDLAYQVDFPRLEIVLEGEFVDTGAGA
                     TLVPGDVLYVAAGGWNFPQWKTPTTTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR
                     RGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI
                     RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG
                     YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE"
     gene            complement(18515..18856)
                     /locus_tag="OQQ57_000854"
     CDS             complement(18515..18856)
                     /locus_tag="OQQ57_000854"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HCS1955702.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(18858..19736)
                     /locus_tag="OQQ57_000855"
     CDS             complement(18858..19736)
                     /locus_tag="OQQ57_000855"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HCS1955703.1"
                     /translation="MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
                     KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVAT
                     MREMAERAGFQVTVGG"
     gene            complement(19702..21999)
                     /locus_tag="OQQ57_000856"
     CDS             complement(19702..21999)
                     /locus_tag="OQQ57_000856"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCS1955704.1"
                     /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAVLAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTQGEDPAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDEQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLWEAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(22050..22370)
                     /locus_tag="OQQ57_000857"
     CDS             complement(22050..22370)
                     /locus_tag="OQQ57_000857"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HCS1955705.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(22385..23464)
                     /locus_tag="OQQ57_000858"
     CDS             complement(22385..23464)
                     /locus_tag="OQQ57_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
                     /protein_id="HCS1955706.1"
                     /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA
                     VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG
                     FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA
                     LTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVVI
                     AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI
                     PSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL
                     KSLARKNGSSTDEKEDDLDLDFEIN"
     gene            23773..26274
                     /gene="ptsP"
                     /locus_tag="OQQ57_000859"
     CDS             23773..26274
                     /gene="ptsP"
                     /locus_tag="OQQ57_000859"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCS1955707.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK
                     GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLRQHLLTGVSEGLSCAEAIVAS
                     ANHFCEEFARSSSSYLQERALNVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            26286..26948
                     /gene="fsa"
                     /locus_tag="OQQ57_000860"
     CDS             26286..26948
                     /gene="fsa"
                     /locus_tag="OQQ57_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HCS1955708.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            26959..28062
                     /gene="gldA"
                     /locus_tag="OQQ57_000861"
     CDS             26959..28062
                     /gene="gldA"
                     /locus_tag="OQQ57_000861"
                     /EC_number="1.1.1.6"
                     /EC_number="1.1.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
                     /protein_id="HCS1955709.1"
                     /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA
                     QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA
                     LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA
                     PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM
                     LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA
                     FGTLTQLVLENAPVEEIETVAAFSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE
                     TIHNMPGGATPDQVYATLLVADQYGQRFLQEWE"
     gene            28336..28953
                     /locus_tag="OQQ57_000862"
     CDS             28336..28953
                     /locus_tag="OQQ57_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HCS1955710.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA
                     EYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(28980..29885)
                     /gene="yijE"
                     /locus_tag="OQQ57_000863"
     CDS             complement(28980..29885)
                     /gene="yijE"
                     /locus_tag="OQQ57_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HCS1955711.1"
                     /translation="MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTAL
                     RCIFGALVLFIVLLLRGRGMHPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAIL
                     SYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILS
                     GVSWGASAIVAKRLYTRHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFW
                     ALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGS
                     GIVLIVLALALVSRKKKEAVSVKSI"
     gene            complement(29979..32159)
                     /gene="katG"
                     /locus_tag="OQQ57_000864"
     CDS             complement(29979..32159)
                     /gene="katG"
                     /locus_tag="OQQ57_000864"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HCS1955712.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD
                     SSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL"
     gene            complement(32488..33378)
                     /gene="metF"
                     /locus_tag="OQQ57_000865"
     CDS             complement(32488..33378)
                     /gene="metF"
                     /locus_tag="OQQ57_000865"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HCS1955713.1"
                     /translation="MSFFHASQRDALNQRLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            complement(33727..36159)
                     /gene="metL"
                     /locus_tag="OQQ57_000866"
     CDS             complement(33727..36159)
                     /gene="metL"
                     /locus_tag="OQQ57_000866"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HCS1955714.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(36162..37322)
                     /gene="metB"
                     /locus_tag="OQQ57_000867"
     CDS             complement(36162..37322)
                     /gene="metB"
                     /locus_tag="OQQ57_000867"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HCS1955715.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWTNNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            37599..37916
                     /gene="metJ"
                     /locus_tag="OQQ57_000868"
     CDS             37599..37916
                     /gene="metJ"
                     /locus_tag="OQQ57_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HCS1955716.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            38100..38708
                     /locus_tag="OQQ57_000869"
     CDS             38100..38708
                     /locus_tag="OQQ57_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
                     /protein_id="HCS1955717.1"
                     /translation="MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH
                     SDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK
                     LAQTVKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
                     QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW"
     gene            38853..39395
                     /locus_tag="OQQ57_000870"
                     /pseudo
     CDS             38853..39395
                     /locus_tag="OQQ57_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT         9656 a        10897 c         9904 g         8938 t
ORIGIN      
        1 cattcaacca aatcagccta aaactgccag tttttcgagc gtttcgaagc cgtaacgctg
       61 taaaacgggc aataattgtt cagcttctgg cgtcattgcc atacaaaagg caatattcgc
      121 atcggcagat tttgcatccg gggcttcatg ttctaacaac caggccgttc ggcgagcaat
      181 cgctgcgcca gaatccacta gccgggttcc ctctggcagc acttgtaaca gttcttcttg
      241 tagtagaggg aaatgggtgc aacccaatac aacggtatct ggcggctctt tcattcttaa
      301 ccacgggcgt aggatacgtt ttagtgcatc cagagaaaca tcttcgccat gtagcttcgc
      361 ttcagccaac tcaaccatct ctgccgagcc cagcatttct atctggcatt cattagcgaa
      421 acgcgcgatc agctcatgag tataagaacg tttaactgtt ccgcgggttg ccagtaatcc
      481 gacaatgcca tttgccgtca gacgtgcagc aggtttaatc gccggcacga caccaacaac
      541 cgggaagtcg aacttttcgc gtaatgcagg aagtgaaacg gtactggcag tgttgcaagc
      601 gaccacagcc agcgcaaggg gataacgttc ttgcaccgcg gtgacaattg ccaccactcg
      661 ctcaacaata aacgcttcgc ttttttcgcc atacgggaaa gcgacgttat cgaaagcata
      721 aatgtaatgg agatccggta agagatgccg gatctcgtca tagaccgaca acccaccgac
      781 gccggagtca aacaccagca cggtgggacg tggttcagaa ggtgtagctg ccagacaagg
      841 tgtattcccg tcctgcagtt tggtagccat agactgtctc ataatctttg tcgaacaggt
      901 tggctatttt accacgaact gtcaggtgag aggtgaccgg atacgcaacc gcaagatccc
      961 acaagctcac accgcccatt ttaacggttt gataaggata agatgagtaa tccttatcat
     1021 agcgagtgcc taaatactga taagtaatac cccagtcgaa gtcatacaac tgccagtcga
     1081 gctggtattt cacctgctgt ttagcacggc gtaacaacgg cgtgtcggta atcgcattgc
     1141 gcgcatcgac ataatcataa ctcacagtat gcgtcagtgg tccggtatca aaattggcgg
     1201 tcgcctcgac gcccttaatc cgcgctttcc cttcgttgta atatttcagg gtgtgatcat
     1261 cataatcgat caagtcactg acatcgttac gatatccgga aatacgccag ttcaccccag
     1321 cggttaagcc ttcaaacgcg ccttcccact gtttgctttt ctccgggtcc agattcggat
     1381 ttccgtagaa gccatacagt tgccccagat ttggtgcctt ataagatgtc ccgtaggaag
     1441 caatgaagcg ataaccttcg atgaattccc aaccggcgct ggtttgccag gttccatgac
     1501 gaccaaactg tgagttatcg tcactgcgtg ctgcgccttc aaaggtaaaa tcgccgactt
     1561 gttgcagccc ggtcagatag atgccggtat tacgttgatc atatccatcc tcaacataac
     1621 ctgtacccgg cgtcgtagtc tgtttctgcc agtcgacacc cgcaccaata ctaccgtgac
     1681 caacgatgac attgtttgcc cactggacgg tgtattgctt catctcatcg agcgtcgccg
     1741 acgaatcata acgaccataa tggggatcgt agttgtaatc tttgctatgg ctatagctgg
     1801 taatgagttg tgatttaatc agttcgccgt tatagcgcag cccggcgtcc caactttggc
     1861 tatagagttt acggatatcg agcaacggtg aaccgggaga ataatacgcg tcataattgg
     1921 tacggttatc atagccatag ccgcgcacaa agccgctcca ggcatcagta aagttatgct
     1981 ccagcgcgcc ataaagcgtt ttacttaaaa aaacatcgtt atctgtctgc gcttgcgttc
     2041 cggtattacc ataggcaaca acatcataac catgagtatg ggcataatcg cccaacagcg
     2101 ttacccgtgt cttatccccc agttgttgct gcgtagagac atcatagttc tgataactat
     2161 tgcttcccca ccctgctgaa atttccgttc cgggttcatc gcgcgtcgtg atgatattca
     2221 ccaccccgcc tattgcatcg gaaccataaa cagcggagcg cggcccacgg atatattcaa
     2281 cacgctggac aagcgcacgc aatagggaac tggctaaggt cggcagaacc actcaccccc
     2341 gccagattca ggcgtacgcc atcaattaac accaacacat gactggcatt tgtaccgcga
     2401 ataaaaatag atgagagctg acctgaaccg ccgttttggg tgatatcgac gcccggaaga
     2461 cggcgcagca catcattgac cgaggtcgac tgccagcggt cgatatcctg acgggtcaca
     2521 acggtggttg gtgcaagcac agtgctgcgc ggctgttcaa aacggttagc agtaacgacg
     2581 agagtatccg ggctggtatc ctgtgcccaa gcggaaaagg ctgtgacaga acacgccgtc
     2641 agcagcgaag cttttttaat cattgtaaag catccacaat agaagaagga tgccgcaggt
     2701 ttcatcaata ttacgcgatg atgagacgtt ggccggcagg tcttcgggct tggaggggta
     2761 tctaagatac taagagatga tgacttccca ccggatggca gtgtccgcat aacgcaatca
     2821 tcgcaccttt ccttaccgct gcgcgtcagc tccagattcg cactggattc cctattaact
     2881 cacaggaccg gcaagtggat gctacaggtt gtaacaagtt actgtccaga cgtagctcac
     2941 aaataggaat tcatcaagat ctggacatct gatgagcaat ccctacaatc gccgcgtact
     3001 ttaatttttc aggatacatc atgacccccg aacaccttcc aacagaacag tatgaagcgc
     3061 agttagccga aaaagtggta cgtttgcaaa gtatgatggc accgttttct gacctggttc
     3121 cggaagtgtt tcgctcgccg gtcagtcatt accggatgcg tgcggagttc cgcatctggc
     3181 acgatggcga tgacctgtat cacatcattt tcgatcaaca aaccaaaagc cgtatccgcg
     3241 tggatagctt ccccgccgcc agtgaactta tcaaccagtt gatgacggcg atgattgcgg
     3301 gtgtgcgtaa taatcccgtt ctgcgccaca agttgttcca gattgattac ctcaccacgc
     3361 tgagtaatca ggcggtggtt tccctgctat accataagaa gctggatgat gagtggcgtc
     3421 aggaagcgga ggccctgcgc gatgcactgc gcgcgcagaa tctgaatgtg catctgattg
     3481 gtcgggcaac gaaaaccaaa atcgagctgg atcaagatta catcgacgag cgtctgccgg
     3541 tcgcagggaa agagatgatc taccgtcagg tagaaaacag ctttacccag ccgaacgcgg
     3601 cgatgaatat tcagatgctg gaatgggcgc tggacgtaac caaaggctca aaaggcgatt
     3661 tactggagct gtactgcggc aacggtaact tttcattagc gctggcgcgc aattttgatc
     3721 gggtattagc caccgaaatc gctaagccgt cggttgctgc tgcgcaatac aacatcgcag
     3781 ctaaccatat tgataacgta caaattattc gtatggcggc agaagaattt actcaggcga
     3841 tgaatggtgt gcgcgagttt aaccgcctgc aagggatcga cttaaagagt tatcagtgcg
     3901 aaaccatttt tgtcgaccca ccgcgcagcg gtctggacag tgaaaccgag aaaatggtgc
     3961 aggcgtatcc gtgtattttg tacatctcct gtaacccgga aacgttatgc aagaatctgg
     4021 aaacattaag ccagacgcac aaggtcgaac gtctggctct gtttgatcag ttcccctaca
     4081 cgcaccatat ggagtgcggc gtattactga ccgcgaagta aaacccatgc cggatgcgcc
     4141 agcatccggc ataataccga ttactcagca acttcctgct tacggttacg catcttcgcg
     4201 ccaatccaga acaccataat gacggagagt actgccggga agaagttaga gccgatatcc
     4261 ggatattccg cacgaactac cgtgctgtac agcagtacgc cgagaataaa acaggcagct
     4321 gccagacccg gcaagcctac cggcatagtg cgattaagat aacgttgatg caggcagtaa
     4381 accgtcagca ccagggaaat aatcgggaat acagaaaatg gcacaatgga gctaaacagc
     4441 gctgcgaaag taccattaat cgataagcca gcaactaacg ccagcagcag cgtacctcta
     4501 tcttgatttg cttgtttcat tactcgtcct tcacatttcc cggaataatt gcggttttct
     4561 cttgttcacg gcgataccag taataagccc ctttcgaaat cattcgcagt tgcagtacca
     4621 gtcgctcttc taattgccga cgttgttcga cgccgacgtc caacgcctcg gcacccgcac
     4681 tgaagacaat tgtcaccatt gcttcggctt gcgcttcagt aaacgcacgc ggcatatggt
     4741 tttcgagttc cagatagtcc gcaagttccg caatgaagtg ctgaatttca cgcgcaacgg
     4801 cggcacgaaa cgcagcggag gtgccggagc gttcccgcaa taataaccgg aaggcgttag
     4861 gattattacc gatgaactcc ataaatgtgg agaccgaggt gcggatcaca ctcccgcctt
     4921 tggcgatacg ctgacgcgcc tggcgcatga gttggcgtag cattaaaccg ctctcatcaa
     4981 ccatggtcag acccagttcg tctacgtcgc ggaaatgccg ataaaaagag gtgggagcaa
     5041 tgcccgcttc acgcgccact tcacgcaaac tcaggctggc gaagctgcgt tcagcactta
     5101 attggctaaa tgcggcttcc accagcgaac ggcgggtttt ttctttttgt tgcgctctta
     5161 tgcccatcac gatgtctgaa tccttgccaa aagtactgct ggcactatac cagagaatga
     5221 acatactgga ttgctccagt attgtgaatg aacggtaacg caataaaaca tatttactgg
     5281 ccggttcttt tacgtacagc ggaaacctgc cgcttaaacg gagagtatcg tcgataaaaa
     5341 tccaataaaa cgtcagggca aaagtaagaa acagacaaag caaaggccgc tcaggatata
     5401 gccagataaa tgacggggat caattggctt acccgcgata aaatgttacc attctgttgc
     5461 ttttatgtat aagaacaggt aagccctacc atgccacatt cctacgatta cgatgccata
     5521 gtaataggtt ccggccccgg cggcgaaggc gctgcaatgg gcctggttaa gcaaggtgcg
     5581 cgcgtcgcag ttatcgagcg ttatcaaaat gttggcggcg gttgcaccca ctggggcacc
     5641 atcccgtcga aagctctccg tcacgccgtc agccgcatta tagaattcaa tcaaaaccca
     5701 ctatacagcg accattcccg actgctccgc tcttcttttg ccgatatcct taaccatgcc
     5761 gataacgtga ttaatcaaca aacgcgcatg cgtcagggat tttacgaacg taatcactgt
     5821 gaaatattgc aggggaacgc tcgctttgtt gacgagcata cgttggtgct ggattgcccg
     5881 gacggcagcg tcgaaacact aaccgctgaa aaatttgtta ttgcctgcgg ctctcgtcca
     5941 tatcatccaa cagatgttga tttcacccat ccacgcattt acgacagcga ctcaattctt
     6001 agcatgcacc acgaaccgcg ccatgtactt atctatggtg ctggagtgat cggctgtgaa
     6061 tatgcgtcga tcttccgcgg tatggatgta aaagtggatc tgatcaacac ccgcgatcgc
     6121 ctgctggcat ttctcgatca agagatgtca gattctctct cctatcactt ctggaacagt
     6181 ggcgtagtga ttcgtcacaa cgaagagtac gagaagatcg aaggctgtga cgatggtgtg
     6241 atcatgcatt tgaagtcggg taaaaaactg aaagctgact gcctgctcta tgccaacggt
     6301 cgcaccggta ataccgattc gctggcgtta cagaacattg ggctggaaac tgacagccgc
     6361 ggacagctga aggtcaacag catgtatcag accgcacagc cgcacgttta cgcggtgggc
     6421 gacgtgattg gttatccgag cctggcatca gcggcctatg accaggggcg cattgccgcg
     6481 caggcgctgg taaaaggcga agccaccgca catctgattg aagatatccc taccggcatt
     6541 tacaccatcc cggaaatcag ctctgtgggc aaaaccgaac agcagctgac cgcaatgaaa
     6601 gtgccatatg aagtgggccg cgcccagttt aaacatctgg cacgcgcaca aatcgtcggc
     6661 atgaacgtgg gcacgctgaa aattttgttc catcgggaaa caaaagagat tctgggtatt
     6721 cactgctttg gcgagcgcgc tgccgaaatt attcatatcg gtcaggcgat tatggaacag
     6781 aaaggtggcg gcaacactat tgagtacttc gtcaacacca cctttaacta cccgacgatg
     6841 gcagaagcct atcgggtagc tgcgctaaat ggcttaaacc gcctgtttta acactttatc
     6901 gaaatggcca tccattcttg cgcggatggc ctctgccagc tgctcatagc ggctgcgcag
     6961 cggtgagcca ggacgataaa ccaggccaat cgtgcggcga ggttccggct taatacacgg
     7021 caaataaaca accccatcgc gtttgcgctc cggcggcaca gccagcgcag gcagtaaagt
     7081 gatcccgcta cctgccgcca ccatgttacg cagtgtctcc aggctggtcg cgcggaagtg
     7141 tgtatcttca tccgccccgg cttcaaagca gaaacccatt gcctgatcgc gcaaacagtg
     7201 accatcttcc agcatcagca gtttttcccc tgccagatcg gccatcggta cgcattcgcg
     7261 gttcgcccac gggtgatctt catagatagc cagcaacatt ggctcatcaa acaacggcac
     7321 ttcaatgaat gcttcgctct ctttcaccag cgcgaggatc acgcaatcga gtttgccgct
     7381 gtccagttgc gccagtaact ggtgggtctg tgcttcatgc agatacattt ccagctttgg
     7441 aaatgtctgg tgcagcatcg ggataatatg cggcagcagg tacggtccaa ccgtaggaat
     7501 caaaccaata tgcagcggtc cggacatcgt ctcgccctgc tggcttgcca tctctttaag
     7561 gactttcacc tcacgcagca cggtacgcgc ctgatccacc agcagcattc ccgcctgggt
     7621 gaacaacact ttacggctgg tccgctccag caacatcacg cccagctcat cttccagctt
     7681 acgaatttgg ccgctaagcg tcggctggct aacgtggcag gaatctgccg cacgccgaaa
     7741 atggcggtgt tcagccaatg ccaccaggta ctcaagatca cgaatattca ttatccatcc
     7801 tccatcgcca cgatagttca tggcgatagg tagaatagca atgaacgatt atccctatca
     7861 agcattctga ctgataattg ctcacagaaa cggagcggca cctcttttaa cccttgaagt
     7921 cactgcccgt ttcgagagtt tctcaactcg aataactaaa gccaacgtga acttttgcgg
     7981 atctccagga tccgcttttt tttgccataa aaaagcccgg cgataagcca ggctcaaatt
     8041 tgtacatata aatgttctta ccccaaccgc gcctgcgcaa aagcaatcgc ttgggccacc
     8101 tgctgcggtg agacgccgcc ttttgccgca cgcttgtcga ggcacgattg tagcgacaga
     8161 atcggataga catcttcgcc aatcacgtgg ctgaatttct gcaactcgtc gagcggcaga
     8221 tcttccagcg gtttgccctg acgaatggct tccaccaccg cttcacccac gatatggtgc
     8281 gcctcgcgga aaggtacgcc tttcgccacc aggtaatccg ccagttcggt ggcgttggcg
     8341 taaccctgct gagccgcttc ctggcaacgt ggacgtttca cctgaatgcc gtccagcacc
     8401 agcgccgcca tatgcaggca gtccagccag gtatcgaacg cgtcgaacag accttctttg
     8461 tcttcctgca tatctttgtt gtaagccagc ggcaaacctt tcagcgtcat catcatgccg
     8521 gttaacgcac cctgcacccg accgcattta ccgcgaatca gctccagcgc atccgggttt
     8581 ttcttctgcg gcattaatga tgaaccggaa gtcacgcggt cagaaagctc cacaaacccc
     8641 gcttcgccgg tgttaaagaa aatcagatct tcagcaaaac gcgacagatg caccatgccg
     8701 atagcggcag ccgacagcag ttccaacaca tggtcacggt cagaaacgct gtccagactg
     8761 ttacgggtcg ccgaagcaaa gcccagccag cctgctaact gttcacggtc gatttcatag
     8821 gccgttcccg ccagcgcgcc acagcctaat gggctgacat ccagacgctt aagcgcatcc
     8881 tgcaaacggc tttcatcacg cgccagcatc tcaacatagg ccaggcacca gtgcgcgaac
     8941 gtcaccggct gggcgcgttg caggtgagtg taacctggca ttaccgcgtc ctgattgttt
     9001 tgtgcggttt ccaccagcgc cgattgcagc tgccggttag ccgtcagtaa ctcgctaacg
     9061 gtatctttgc accacagttt caggtcagtc gctacctgat cattacggct acgcccggta
     9121 tgcagctttt tgcctaactg gcccactttg tcgatcagtt tgccttccac ccagctatgg
     9181 atatcttcgg cgtcgctttc aaggatttgt tgtggcctgg cgcgaacatc ttccagcaac
     9241 acgttcagcg cctcttccag ttgcgcctgc tcttctgcgg ttaacacgcc gaccgttacc
     9301 agggctttgg accaggccac agagccaaca atatcctgct ccgccagacg gtaatcaaag
     9361 cgcagtgagt cgttgaattg tttgaaccgt tgatctgctg cctgggtaaa acgcccgccc
     9421 caaagtgcca taactctgtt tccttatttt gaaattcaat gccggaaagc tgcgcctccg
     9481 gctaacaaaa cttaagctaa aatccgcgta cccatcggca taccgttaaa cagtgccgga
     9541 agctgctccg catgacgcca ggaggcgata tctaccggac ggcccagcgt gcgggccgca
     9601 tccagcgccg cgttcacttt cactatcatg ccgtcagtaa taatgccctg ctcaatcagt
     9661 tgttctgctt tcgcggcggt catttcggca atgcgttgcc ctttgccgtc gagaatgccg
     9721 ctgacgtcgg agagcaaaat cagatccgcg cccagcgttg ccgccagcgc cgttgccgcc
     9781 tggtcggcat tgacgttcat cagttgccct tcgtctgtta cgccaatgga gctgaccacc
     9841 ggcagataac cgttctccag caaggagttg ataagcttag gcgaacctgg ctgcgccagt
     9901 ccaacatgac ctaactcttc atcaagctgg gtcactttga cgctgtcgcc atcaccgaga
     9961 aacaaaccta cagccgcaat ctgatgtttc ttcgcccatg ccaacagggt tttatttgcc
    10021 gttcccgcca gtgctccggt gataatgtct atctgatcag caggcgtcac ccgcaggccg
    10081 tttttctttt tcaccggcag attcagccct ttcatcagct catccaccac gcaaccgccg
    10141 ccgtgcacaa tcaccagcgg acgctgatgt gactcacgat aattcaccag tgcgctaaac
    10201 agacgttcca gcgcctcttc actatccagc agtacgccgc ccagtttgat aattaatgga
    10261 ttcatcattg cacccttaaa taagagactg cgtttccgca tagccgaaac gaatattggc
    10321 gcactgtacc gcttgtgccg ccgcgccttt cagtaagttg tcttcggtcg ccacaataat
    10381 cagatgctcg ccctgaacgg caaacccgat atcgcaaaat ggcagcccaa cgacattttt
    10441 cagcgccgga acgcctttgt catacagccg caccagcggt ttatgggcat acgcctgctg
    10501 taacacttgc gcgacttgcg cctgggtcac acccgatttc aggcggcagg taatggtttc
    10561 gagaatgccg cgcgggaaat tgcccagatg tggggtgaag ataacgtcag caccgaggtg
    10621 tgtggcgatc tctggttgat ggcgatgagt aaagacgcca tacggttgca ggctaacttc
    10681 acaaaaacta tttgaaatcg ctgccttacg tcctgcaccg ctcacgccgc tggtggcgtt
    10741 aatcgccggc cactgattga ggtcaagaag atcggcatca atcaacggtt tcagcgccag
    10801 ctgtgccgcc gtcggataac agcctggcac cgcaatcaaa ttcgcttctt ttaatttatt
    10861 accgcaccac tccgccagac cgtaggctgc ctgttccagc agttccgggt attgatgggt
    10921 aaagccgtaa tatttttcat agaaggtggc gtcgttaaca cgaaacgcgc cggaaaggtc
    10981 gaacaccacg cagcccgctt caagaaactg cggcgctaaa tcgtggctaa cttcatgggc
    11041 ggtggcgaga aacactacgt ccacccctgg gctaaactcg ctgatatccg acatcggctg
    11101 caacggcagc tcaacgatgc cttttagctg cggatgcaaa tcggagatta actttcccgc
    11161 atcattgctt tgcgctgaaa cagtcaaagc ggttatgttc atatgcggat ggcgatttac
    11221 ataggtcact agctctgcgc cagcgtagcc gctggcaccc acaatcagcg tattcaacat
    11281 cggggctatt caccttctta tgtctggttg ccaggttaaa cgtaaaacat tcaccttacg
    11341 gctggtgggt tttattacgc tcaacgttag tgtattttta ttcataaata ctgcatgaat
    11401 attgatacta tcatgaccag aggtgtgtca acaatgaaaa acaaattacc gccatttatc
    11461 gagatttacc gcgctctgat tgccacacct tcaataagcg ctacggaaga ggcactcgat
    11521 caaagcaatg cagatttaat cactctgctg gcggactggt ttaaagattt gggcttcaat
    11581 gtggaagtgc agcctgttcc aggaactcgc aacaaattca atatgctggc aagtatcgga
    11641 cagggggctg gcggcttgtt gctggcgggg cataccgata cggtgccatt tgatgacggt
    11701 cgctggacgc gcgatccgtt tacactgacg gagcatgacg gcaagcttta cggcttaggc
    11761 accgccgaca tgaaaggctt ttttgcgttt atccttgatg cgctacgcga tatcgacgtc
    11821 acgaaactga aaaaaccgct ctacattctg gcgactgctg atgaagaaac cagtatggcc
    11881 ggagcgcgtt attttgccga aactaccgcc ctgcgcccgg attgcgccat cattggcgaa
    11941 ccgacgtcac tacaaccggt acgcgcacat aaaggtcata tctctaacgc catccgtatt
    12001 cagggccagt cggggcactc cagcgatcca gcacgcggag ttaacgctat cgaactaatg
    12061 cacgacgcca tcgggcatat tttgcaattg cgcgataacc tgaaagaacg ttatcactac
    12121 gaagcattta ccgtgccata ccctacgctc aacctcgggc atattcacgg tggcgacgct
    12181 tctaaccgta tttgcgcttg ctgtgagttg catatggata ttcgtccgct gcctggcatg
    12241 acactcaatg aacttaatgg tttgctcaac gatgcattgg ctccggtgat cgaacgctgg
    12301 ccgggtcgtc tgacggtcga cgagctgcat ccgccgatcc ctggccatga atgcccaccg
    12361 aatcatcaac tggttgaagt ggttgagaaa ttgctcggag caaaaaccga agtggtgaat
    12421 tactgtaccg aagcgccgtt tattcaaacg ttatgcccga cgctggtgct cggtccgggt
    12481 tccatcaatc aagctcatca gcctgatgaa tatctggaga cgcggtttat taaacccacc
    12541 cgtgagttga ttatccaggt aattcaccat ttttgctggc attaaaacgt aggccggata
    12601 aggcgctcgc gccgcatccg gcaccgttgc caaactccgg tgccgcaata atgtcggatg
    12661 cgatgcttgc gcatcttatc cgacctacac ctttggtgtt atgtatggcg attttttaac
    12721 atttccataa gttacgctta tttaaagcgt cgtgaattta atggcgtaaa ttcctgctat
    12781 ttattcgttt gctgaagcga tttcgcagca tttgacgtca ccgcttttac gtggctttat
    12841 aaaagacgac gaaaagcaaa gcccgagcat attcgcgcca atgcgacgtg aaggatacag
    12901 ggctatcaaa cgataagatg gggtgtctgg ggtaatatga acgaacaata ttccgcattg
    12961 cgtagtaatg tcagtatgct cggcaaagtg ctgggagaaa ccatcaagga tgcgttggga
    13021 gaacacattc ttgaacgcgt agaaactatc cgtaagttgt ccaaatcttc acgcgctggc
    13081 aatgatgcta accgccagga gttactcacc accttacaaa atttgtcgaa cgacgagctg
    13141 ctgcccgttg cgcgtgcgtt tagtcagttc ctgaacctgg ccaacaccgc cgagcaatac
    13201 cacagcattt cgccgaaagg cgaagctgcc agcaacccgg aagtgatcgc ccgcaccctg
    13261 cgtaaactga aaaaccagcc ggaactgagc gaagacacca tcaaaaaagc agtggaatcg
    13321 ctgtcgctgg aactggtcct cacggctcac cctaccgaaa ttacccgtcg tacactgatc
    13381 cacaaaatgg tggaagtgaa cgcctgctta aaacagctcg ataacaaaga tatcgctgac
    13441 tacgaacaca accagctgat gcgtcgcctg cgccagttaa tcgcccagtc atggcatacc
    13501 gatgaaatcc gtaagctgcg tccaagcccg gtagatgaag ccaaatgggg ctttgccgta
    13561 gtggaaaaca gcctgtggca aggcgtacca aattacctgc gcgaactgaa cgaacaactg
    13621 gaagagaacc tcggctacaa actgcccgtc gaatttgttc cggtccgttt tacttcgtgg
    13681 atgggcggcg accgcgacgg caacccgaac gtcactgccg atatcacccg ccacgtcctg
    13741 ctactcagcc gctggaaagc caccgatttg ttcctgaaag atattcaggt gctggtttct
    13801 gaactgtcga tggttgaagc gccccctgaa ctgctggcgc tggttggcga agaaggtgcc
    13861 gcagaaccgt atcgctatct gatgaaaaac ctgcgttctc gcctgatggc gacacaggca
    13921 tggctggaag cgcgcctgaa aggcgaagaa ctgccaaaac cagaaggcct gctgacacaa
    13981 aacgaagaac tgtgggaacc gctctacgct tgctaccagt cacttcaggc gtgtggcatg
    14041 ggtattatcg ccaacggcga tctgctcgac accctgcgcc gcgtgaaatg tttcggcgta
    14101 ccgctggtcc gtattgatat ccgtcaggag agcacccgcc ataccgaagc gctgggcgag
    14161 ctgacccgct acctcggtat cggcgactac aaaagctggt cagaggccga caaacaggcg
    14221 ttcctgatcc gcgaactgaa ctccaaacgt ccgcttctgc cgcgcaactg gcaaccaagc
    14281 gccgaaacgc gcgaagtgct cgatacctgc caggtgattg ccgaagcgcc gcaaggctcc
    14341 attgccgcct acgtgatctc gatggcgaaa acgccgtccg acgtactggc tgtccacctg
    14401 ctgctgaaag aagcgggtat cgggtttgcg atgccggttg ctccgctgtt tgaaaccctc
    14461 gatgacctga acaacgccaa cgatgtcatg acccagctgc tcaatatcga ctggtatcgc
    14521 ggcctgattc agggcaaaca gatggtgatg attggctatt ccgactcagc aaaagatgcg
    14581 ggcgtgatgg cagcgtcctg ggcgcaatat caggcacagg atgcattaat cagaacctgc
    14641 gaaaaagcgg gtattgagct gacgttgttc cacggtcgcg gcggttccat tggtcgcggc
    14701 ggtgcacctg cccatgcggc actgctgtca caaccgccag gaagcctgaa aggcggcctg
    14761 cgcgtaaccg aacagggcga gatgatccgc tttaaatatg gtctgccaga aatcaccgtc
    14821 agcagcctgt cgctttatac cggggcgatt ctggaagcca acctgctgcc accgccggag
    14881 ccgaaagaga gctggcgtcg cattatggat gaactgtcag tcatctcctg cgatgtctac
    14941 cgcggctacg tacgtgaaaa caaagatttt gtgccttact tgcgctccgc tacgccggaa
    15001 caagaactgg gcaaactgcc gttgggttca cgtccggcga aacgtcgccc aaccggcggc
    15061 gtcgagtcac tacgcgccat tccgtggatc ttcgcctgga cgcaaaaccg tctgatgctc
    15121 cccgcctggc tgggtgcagg tacggcgctg caaaaagtgg tcgaagacgg caaacagagc
    15181 gagctggagg ctatgtgccg cgattggcca ttcttctcga cgcgtctcgg catgctggag
    15241 atggtcttcg ccaaagcaga cctgtggctg gcggaatact atgaccaacg cctggtagac
    15301 aaagcactgt ggccgttagg taaagagtta cgcaatctgc aagaagaaga catcaaagtg
    15361 gtgctggcga ttgccaacga ttcccatctg atggccgatc tgccgtggat tgcagagtct
    15421 attcagctac ggaatattta caccgacccg ctgaacgtat tgcaggccga gttgctgcac
    15481 cgctcccgcc aggcagaaaa agaaggccag gaaccggatc ctcgcgtcga acaagcgtta
    15541 atggtcacta ttgccgggat tgcggcaggt atgcgtaata ccggctaatc ttcctcttct
    15601 gcaaaccctc gtgcttttgc gcgagggttt tctgaaatac ttctgttcta acaccctcgt
    15661 tttcaatata tttctgtctg cattttattc aaattctgaa tataccttca gatatcctta
    15721 aggaattgtc gttacattcg gcgatatttt tttcaagaca ggttcttact atgcattcca
    15781 cagaagtcca ggctaaaccc ctttttagct ggaaagccct gggttgggca ctgctctact
    15841 tttggttttt ctctactctg ctacaggcca ttatttacat cagtggttat agtggcacca
    15901 acggcattcg cgactcgctg ttattcagct cgctgtggtt gatcccggta ttcctctttc
    15961 cgaagcggat taaaattatt gccgcagtaa tcggcgtggt gctatgggcg gcctctctgg
    16021 cggcgctatg ctactacgtc atctacgggc aggagttctc gcagagcgtt ctgtttgtga
    16081 tgttcgaaac caacaccaac gaagccagcg agtatttaag ccagtatttc agcctgaaaa
    16141 ttgtgcttat cgcgctggcc tatacggcgg tggcagttct gctgtggaca cgcctgcgcc
    16201 cggtctatat tccaaagccg tggcgttatg ttgtctcttt tgccctgctt tatggcttga
    16261 ttctgcatcc gatcgccatg aatacgttta tcaaaaacaa gccgtttgag aaaacgttgg
    16321 ataacctggc ctcgcgtatg gagcctgccg caccgtggca attcctgacc ggctattatc
    16381 agtatcgtca gcaactaaac tcgctaacaa agttactgaa tgaaaataat gccttgccgc
    16441 cactggctaa tttcaaagat gaatcgggta acgaaccgcg cactttagtg ctggtgattg
    16501 gcgagtcgac ccagcgcgga cgcatgagtc tgtacggtta tccgcgtgaa accacgccgg
    16561 agctggatgc gctgcataaa accgatccga atctgaccgt gtttaataac gtagttacgt
    16621 ctcgtccgta caccattgaa atcctgcaac aggcgctgac ctttgccaat gaaaagaacc
    16681 cggatctgta tctgacgcag ccgtcgctga tgaacatgat gaaacaggcg ggttataaaa
    16741 ccttctggat caccaaccag cagacgatga ccgcccgcaa taccatgctg acggtatttt
    16801 cgcgccagac cgacaagcag tactacatga accagcaacg tacgcagagt gcgcgtgaat
    16861 acgacaccaa cgtgctgaag ccgttccagg atgtgctgaa tgaccctgcg ccgaagaaac
    16921 tgatcatcgt tcatctgctg ggtacgcata tcaaatacaa ataccgctac ccggaaaatc
    16981 agggcaagtt tgatggcaat accgatcatg ttccgccagg attaagcgca gaagagctgg
    17041 aatcatataa cgattatgac aacgctaact tgtataacga tcatgtggtt gccagcctga
    17101 ttaaagactt taaagcggca gacccgaacg gattcctggt ttacttctct gaccacggtg
    17161 aagaggttta cgacacgccg ccgcacaaaa ctcaggggcg taacgaagac aacccgacgc
    17221 gccacatgta caccattccg ttcctgctgt ggacgtcgga aaaatggcaa gcgactcatc
    17281 cccgtgattt ctcacaggat gtcgatcgta aatacagcct ggcggaactg atccacacct
    17341 ggtcagattt ggcgggctta tcttacgacg gttacgatcc aacccgttca gtggtgaatc
    17401 cgcagttcaa agaaactacc cgctggattg gtaacccgta caagaaaaac gcgctgatcg
    17461 attacgacac tctgccgtat ggcgaccagg taggtaatca gtaattatca gccaggcgct
    17521 atttgccgga tgcgacgctt gacgcgtctt atccggccta cagatcgcgg cggtaggctg
    17581 gataaggcgt ttacgccaca tccggcaata caactgccgc aatgtttaca tcgaactccc
    17641 ctcaggccac acttttcagg tggccttttt taataatgcc agttactgtt ttcccgtcta
    17701 catacctaag ggaataacat gtatcacgac atcagctatc tgctctcccg cctgatcaac
    17761 ggcccggtgc ccgatcttgc gtatcaggtc gattttccac ggctggaaat tgtgctggaa
    17821 ggtgagtttg ttgataccgg cgctggagca acgttagttc ccggcgatgt gctgtacgtt
    17881 gccgctggtg gctggaattt cccacaatgg aaaacaccca ctaccacctt tagcgtgctg
    17941 tttggcaaac agcaactcgg cttcagcgtc gtgcaatggg atggcaaaca atatcaaaat
    18001 ctggcgaagc aacacgtcgc ccgacgcggc ccacgtatag gttcttttct gctacaaacg
    18061 ctcaatgaaa tgcaaatgca gccgcaggag cagcaaacgg caaggcttat cgtagccagc
    18121 ctgcttagcc actgccgcga tttgctcggc agccaaatcc agaccgcctc acgcagccag
    18181 gcactatttg aagctattcg cgattatatc gacgaacgct atgcctccgc gcttacccgc
    18241 gaatctgtcg cacaggcatt ctatatttca ccaaactatc tctcgcacct gtttcaaaaa
    18301 acgggggcca ttggttttaa cgaatacctg aatcacacgc gactggagca cgctaagacg
    18361 ttattgaaag gctatgacct gaaggtaaaa gaagtggcgc acgcctgcgg ctttgtcgac
    18421 agcaactact tctgccgtct gtttcgtaaa aacaccgaac gctcgccgtc ggaatatcgc
    18481 cgacagtacc acagccaact gacagaaaaa ccgactactc cagaataaga tgggtttgct
    18541 gcggcgcaga aagcactttg cgcaccgcgc tcattacccg ctgcggctca cgcaggaatg
    18601 cgtagatgct gcattgcaca tagcggcaat gttcaaatcg ctcggcaccg gcaagctcga
    18661 tatccgtaat caacagagca acatccgccc gacggatatc ctcgtccgct aaacgattct
    18721 ccgttcccag cgcgccctga gtttcaatgc tgacgcccca cttctctaac tggcacaact
    18781 tttccagccg ttccgccgcc atataagtat gcgccacgcc gcttacgcag gcggttactg
    18841 ccaccaggta tgccatttta acctcccacg gtaacctgaa atccggcccg ttctgccatt
    18901 tcgcgcatcg ttgccacatc ggctgatgac ggcgcagcaa catccttcat cgaccatgtt
    18961 ttccccagca ggcggtattt cggctcgccg tactgatgaa acggcaacag atggatctgc
    19021 ctgatattca gcgggatcag cacgtccagc gcctgctgca tattctcccg gctgagtgtg
    19081 aaaccgggga tcagcggcaa acgcgggatc acgttgacac cctcactcac cagcaaacgc
    19141 aggttctcca gtacgcgtgg caggttcatc ttcaccacat cccgcgcctg agtcgcgtcc
    19201 ataattttta aatcgaacaa cacttcatcg cacaatttcg ccagcggtaa cagcttgctg
    19261 gctggtgcgt ctccggcagt ttcaatggca catgagacac cccacagccg cagtcgctgt
    19321 aaaaaacggg tagcaaactc cgcctgcatt aacacttcgc cgccagaaag cgtgacgccg
    19381 ccgccggacg tgcgaaaaaa aatgtcatct ttcatcactt cccgttccag agcgtcaagg
    19441 ctgatatcgc gaccaatccg ttcaaacgcc ccggaggggc attcatccgc atcacgcaaa
    19501 catttcgcac agtgcagaca tttcgcctct ctgcgtaccg tctggatttt gccggagatc
    19561 gactccggat tagcacacca cgggcaaaga tgcggacagc ctttaaaaaa gaccaccgta
    19621 cgaatgccct cgccgtcatt cagtgaataa cgctgaatgt tgaaaatgcg cgccacatca
    19681 ttgaggcgcg tttccacaac gttacagctg atgcgctgtc cggcggatga tgtcatcctg
    19741 gatctccttc gacagttcga caaagaaggc gctgtatccg gcaacgcgca ccaccagccc
    19801 ggcataatct tgtgggcgct gttgcgcttc ccacaacgtg tcggcgttca ccacgttaaa
    19861 ctgaatatgc tgcaacttaa gctgggtaaa cgcccgtaag aagtcggcca gtttgcgtaa
    19921 tcccgcttca ccttccaggg tcgccggagt gaatttcacg ttcagcaacg taccgttaga
    19981 cagcagcgta ttatcgagct tactgactga cttcagtacc gctgttggcc cttgttcgtc
    20041 ctggcccagc ataggtgaca agccgccgtc tgccagctgt tctccggcaa aacgaccgtc
    20101 tggcgtcgcg ccaaccaccg atcccaacgg gacgtgagca gaaacggtat acgatcccgg
    20161 cgtgaagtaa ccaccgcgcg ggttctggta tttttccact tctttgcagt agtggcgcaa
    20221 cagttcggcg ctaatgttat ccacctcgtc gatatcgtta ccatatttct caaagcggtt
    20281 aattaagcga gcgcggactt tttcgccttc tggcgttgca aagttggctt ttaataccga
    20341 cagcaattcg tcaaaactta aacgctgttg ctcaaaaacc atccctttca acgcatggag
    20401 agaatcgctc aggttggcga taccgatccc ctgtacgccg gagaagttat aacgcgcgcc
    20461 gccatcggta atatcgcgac ctttttccag acaatcgctg ataaaagacg agagcagcgg
    20521 tacaggtgcc cagtcgcgat ggccgatatc acaaatattg ctgccctcaa ccatcagggt
    20581 gatgtagtgg ctgatcttgg cgcggatctg ctccagtaaa ccttcataag tcagcgcagc
    20641 attgccttca ttttcatgca ggcagatttc catcactttc agcagattaa acatcgcgat
    20701 gtcatgcaag ccgtaggttc tgccgggaat agataattcc acacagccca ctacggaata
    20761 gtcgcgcgca tcttccagcg aaacgccacg gttgaggaac gctggtacca ccacttcatc
    20821 gttaaagatt tgcggaatac cggtgccgag gcgaatggtt tcggcggttt tcatcaggaa
    20881 tggcgtgtcg atcaaggcgt tagtgcgcac gccgaggttc ggttgcggta attgcacgct
    20941 ttgataggcg tcaaggcaaa ggaacgaaag cacgttcacc gcgctacgtc cgttctcggt
    21001 taacccgccg agcagtgcgg tatagccggt cgggaaacct gcgaaataac gcgcgctgct
    21061 ggtggagcgc aacagcacga tgtcgttgca tttcacccat aaagattcga gcagttcttt
    21121 caggaacgcc ggatcttcgc cctgggttaa agatgcctga tagaacggca acatatactg
    21181 gtcgaagcgc cctaaagaca gcgaactggc gttggattcg tattgcagaa tgatgttcat
    21241 gtaccagaat aactggcacg cctgccagaa cgtctgcggc ttatgttcgg cgttatggcg
    21301 agagatctcc gcaatagtca gcagttcttc gcgacgctgg gcatctgtgc agtttgccgc
    21361 catcgtttcc gccagtacag cgtaacgcaa aatgtgtttc tgcgaggctt ccagcagtaa
    21421 cagcgctgcc tgataaaagt gattctccgg ctgttgctga caatgttgct gcatctgtgc
    21481 caccaactcc cccagcccgt gattcaacag gcgtgggtaa tcaataataa tgtgcccctg
    21541 gcctttatcc gtctggttaa tgctgaaaat ctgcgtgctg gtcgcggctt ttacttcatc
    21601 cgtcatctgc ccgttgatga aatctttcat cgaacgtttt tcccagtacg ggaacaactc
    21661 ttcacgatag atacgtttat cttcttcgct gatagcaaag cggtcctgcg gacgcgtcgg
    21721 gaattgatcc agctctttca gcagccagta agggtccatt tccggcgaca taatcccggc
    21781 gcgcggtttt acggtgcggt taccggcaat cagttcttca tcacgaatcg aaatttcaac
    21841 atgttcaagg atatacgctg ttgctttcgc ccggcgcaat atcaccggtt cgccttcggt
    21901 ttgccgatgg ctggcggtat aaagcagcgc ccgctccagc gagatttcac gggtattggc
    21961 aaacagtgca gttttgaggc gagagatacg attcgtcatg aggaactcct gtgggaaagc
    22021 gaacccgccc ttgcgagcgg gagaagaact taagcggttt gcgccaggtg agcttcaatt
    22081 ttgctcataa tggcgtcagc acgttttact gcatcgctga tgttgacgcg cacgatggtc
    22141 ttgccagcaa aacgctcttc aaacttgatg ccgatatctt tggtcagaat caccatatca
    22201 gcgctcgcca catcttccgc agtcagttca ttttccagac caattgaccc ctgggtttct
    22261 actttcactt cccagccttt cgctttcgcg gcactttccc gcgcctctgc tgccatatag
    22321 gtatgggcaa cacctgaagg acatgcggtt actgcaataa ttttcgtcat ggctcgttcc
    22381 tcaattaatt aatttcaaaa tccaaatcca ggtcgtcttc tttttcatca gtcgaagacc
    22441 catttttacg cgccagactt ttcagcacgt tcacacaaac agccgtcacc actgctccga
    22501 cagccactgc tgcgatataa cccagcttgc cttcaaccac cggcagcaca atcagaccac
    22561 cccagcctgc atagcactgc gcaccgacca gcgccgcagt tactgcacca caaactgaac
    22621 cgaccatgat ggaaggaatg acacgcagcg gatcggcagc ggcgaaagga atcgcccctt
    22681 cagtaacgcc aacacagccc atcaccagtg ccgctttgcc ggtttcgcgc tcttctgcgg
    22741 agaaattttt acgaccaatc agcgtcgcca gccccatccc cagcggcggg atacaaatac
    22801 ccacggcagc gatgaccacc acggtataaa caccctgagc aacgcaaatc agcatgaagg
    22861 cataggctac tttgttaacc ggaccgccca tatcgaacgc cagcatcaga cccatgatca
    22921 ccgccagcat aacaatgctg ccctgctgca tcccctgaag ccactgagtc aggctgttgg
    22981 tcaacgcccc tacaggctcg cccaagcccc acatcatgat gcctgcggta atcagtgtgc
    23041 cgacgatagg aataatgaag ataggcatca ccgagcgcag aactttatgc accggaattt
    23101 tcttcaggta atgcaccacg atgccgccga taatcccggc gatcagtgca ccaaagaagc
    23161 ccgcaccaaa gctgttacca acccaggcac cgatagcgca cggagccagc gcagaacgct
    23221 ctgcaatgga gtaaccaatg taagcggcga ggaaaggcac catcagcgtc aaacctgcaa
    23281 cgccgatatc aaacagtttt ttcaaattcg gatcggctac ggcatccggc actgcgcctt
    23341 tgccatacaa catgacggaa accgccagca aaataccgcc cgataccacg aagggaatca
    23401 tgtgtgaaac gcccgtcatt aaatgctgac gggtattttt caggatctgc accaactcat
    23461 tcataagctg ctcccgggct tgcgaaagcc catgtccata tttttgatgg aggaaacaat
    23521 aggcaatcgc aggcggagca aacagtggat aaaaaggcca tttactggac ttttgtaata
    23581 tcagtacaaa aatgcgatcc gcctcataac ttgcgataaa ccggaagcat gccgcaaaac
    23641 ggcgtcttgt gagacgcgtc gcaaattgac ggttacatta catttgtcca gcttttggca
    23701 gatttgtcac atggcaggcc gttgccgtgc gctcttatcc tgtaaacaga aaaccgtacc
    23761 gggagagagg caatggccct gattgtggaa tttatttgtg agctacctaa cggcgtacat
    23821 gcgcgtccgg caagccacgt tgaaacgctg tgtaatactt tttcatcaca aattgagtgg
    23881 cataacctgc gcactgaccg caagggcaac gccaaaagcg cccttgcgct gattggcacc
    23941 gatacgctgg cgggcgataa ctgccagtta ctgatttccg gggccgacga acaggaagcg
    24001 caccagcgtt taagccaatg gctgcgcgat gaattccccc actgcgatgc gccgctggcg
    24061 gaagttaaat ctgacgaact ggaaccactg ccggtttcac tgaccaatct gaatccgcaa
    24121 attatccgcg cccgcaccgt gtgcagcggt agtgcaggcg gcattctgac gccgatctct
    24181 tctttagatc tcaatgcgct gagtaatctt cccgcagcca aagacgttga cgccgagcaa
    24241 tccgcactgg aaaatggcct gacgctggta ctgaaaaaca ttgagtttcg tctgctggat
    24301 agcgacggtg ctaccagcgc gatactggaa gctcaccgat ccctggctgg cgatacatct
    24361 ttacgtcagc acttactgac aggcgtcagc gagggattaa gctgtgccga agcgattgtc
    24421 gccagtgcga atcacttttg cgaagagttc gcccgttcca gcagcagcta cctgcaagaa
    24481 cgtgccctga acgtacgcga cgtctgcttc cagttactcc agcaaatcta cggtgagcaa
    24541 cgcttcccgg caccgggcaa actgacgcag cccgccattt gtatggctga tgaactgact
    24601 cccagccagt tcctcgaact ggataaaaat cacctcaaag gtctgttact gaaaagtggc
    24661 ggcaccacct cacataccgt aattcttgcc cgttcgttca acattccgac actggttggt
    24721 gtagatattg atgcccttac tccgtggcag catcaaacga tttatatcga cggcaacgcc
    24781 ggggcgattg tggttgagcc aggggaagcc gtggcccgtt attatcagca agaagcccgc
    24841 gtacaggacg cccttcgtga gcaacagcgt gtctggctga cccaacaagc ccgtaccgct
    24901 gacggtatcc gcattgaaat tgccgctaac atcgctcact ccgtggaagc gcaggccgca
    24961 ttcggcaatg gtgcggaagg cgttggtttg ttccgcactg aaatgctcta tatggatcgc
    25021 accagtgcac cgggcgaaag cgagctgtac aacatttttt gtcaggcgct ggagtctgcc
    25081 aacggacgca gcattattgt gcgcactatg gacattggcg gcgacaaacc cgttgattat
    25141 ctgaacattc cggcagaagc taacccgttc ctcggttatc gcgctgtgcg tatttatgaa
    25201 gaatacgcct cgctgttcac cacacaacta cggtcgatcc tgcgcgcctc cgctcacggc
    25261 agcctgaaaa tcatgatccc gatgatctcc tcaatggaag agatcttatg ggtgaaagaa
    25321 aaactggcgg aagccaaaca gcaactgcgt aacgaacaca ttccgtttga tgagaagatc
    25381 cagcttggca ttatgctgga agtaccgtcg gtgatgttca tcatcgatca atgctgcgaa
    25441 gagattgatt tctttagtat tggtagtaat gacctgacgc aatatctgct ggcagtggat
    25501 cgcgataacg ctaaggttac tcgtcactac aacagcctga atccggcatt cttgcgggcg
    25561 ctcgattacg ccgtgcaggc ggtgcatcgc cagggcaaat ggattggtct gtgcggtgag
    25621 ctgggagcga aaggttccgt gctgccgttg ctggtcggct tagggctgga tgaactcagc
    25681 atgagcgcac catcaattcc ggcggcgaaa gcgcggatga cgcaacttga tagccgtgag
    25741 tgccgcaagt tgctcaacca ggcaatggcc tgccgtactt cgctggaagt ggaacacctg
    25801 ctggcgcaat tccgcatgac ccaacaggac gcaccgctgg tcaccgccga gtgcatcacg
    25861 ctggaaagtg actggcgcag caaagaagaa gtgctcaaag gcatgaccga taacctgctg
    25921 ctggcgggcc gctgccgcta tccgcgtaaa ctggaagccg acttatgggc gcgcgaggcc
    25981 gttttctcta ccggtctggg ctttagtttt gccattccac acagcaaatc agaacacatt
    26041 gagcaatcca ccatcagcgt ggcgcgtctg caagcgccgg tgcgctgggg cgatgatgaa
    26101 gcgcaattca tcattatgtt aaccctgaac aaacacgctg cgggcgatca gcacatgcgc
    26161 attttctctc gcctcgctcg ccgcatcatg cacgaagaat tccgtaacgc gctggttaac
    26221 gccgcctctg ccgacgctat cgccagcctg ctgcaacatg aactggaact gtaaaaggaa
    26281 acatcatgga actgtatctg gacaccgcta acgtcgcaga agtcgaacgt ctggcacgca
    26341 tattccccat tgccggggtg acaactaacc cgagcattat cgctgccagc aaggagtcca
    26401 tctgggaagt tctgccgcgt ctgcaaaaag cgattggtga tgagggcatt ctgtttgctc
    26461 agactatgag tcgtgacgcg cagggtatgg tggaagaagc gaagcgcctg cgcgacgcca
    26521 ttccgggcat tgtggtgaaa atcccggtga cttccgaagg tctggccgcc attaagatgc
    26581 tgaaaaaaga gggtattact acgcttggca ccgcagtgta cagtgctgca caagggttac
    26641 tggccgcgct ggcaggggca aaatacgttg ctccgtatgt taaccgcgta gatgcccagg
    26701 gcggggacgg cattcgtacg gttcaggagc tgcaagcgct gttagaaatg cacgcaccag
    26761 aaagcatggt gctggcggcc agctttaaaa cgccgcgtca ggcgctggac tgtttactgg
    26821 caggatgtga atccatcacc ctgcccttag atgtagcgca acaaatgctc aacacccctg
    26881 cggtagagtc agctatagag aagttcgaac acgactggaa tgccgcattt ggcactactc
    26941 atctctaaag gagcaattat ggaccgcatt attcaatcac cgggtaaata catccagggc
    27001 gctgatgtga ttaatcgtct gggcgaatac ctgaagccgc tggcagaacg ctggttagtg
    27061 gtgggtgaca aatttgtttt aggttttgct caatccactg tcgagaaaag ctttaaagat
    27121 gctggactgg tagtagaaat tgcgccgttt ggcggtgaat gttcgcaaaa tgagatcgat
    27181 cgtctgcgtg gcatcgcgga gactgcgcag tgtggcgcaa ttctcggtat cggtggcgga
    27241 aaaaccctcg atactgccaa agcactggca catttcatgg gtgttccggt agcgatcgca
    27301 ccgactatcg cctctaccga tgcaccgtgc agcgcattgt ctgttatcta caccgatgag
    27361 ggtgagtttg accgctatct actgttgcca aataacccga atatggtcat tgtcgacacc
    27421 aaaatcgtcg ctggcgctcc tgcacgtctg ttagcggcgg gtatcggcga tgcgctggca
    27481 acctggtttg aagcacgcgc ctgttcccgt agcggcgcta ccactatggc gggcggcaag
    27541 tgcacccagg cggcgctggc actggcagaa ctgtgctaca acactctgct ggaagaaggc
    27601 gaaaaagcga tgcttgccgc cgaacagcat gtagtaaccc ctgcgctgga acgcgtgatt
    27661 gaagcgaaca cctatttaag cggtgttggt tttgaaagcg gcggactggc ggcggctcat
    27721 gcggtgcata acggcctgac cgctatcccg gacgcgcatc actattatca cggtgaaaaa
    27781 gtggcattcg gtacgctgac gcagctggta ctggaaaacg cgccggttga ggaaatcgaa
    27841 accgtagctg catttagcca tgcggtaggt ttgccaataa ctctcgctca actggatatt
    27901 aaagaagatg tcccggcgaa aatgcgaatt gtggcagaag cggcatgtgc agaaggtgaa
    27961 accatccaca acatgcctgg cggcgcgacg ccagatcagg tttacgccac tctgctggta
    28021 gccgaccagt acggtcagcg tttcctgcaa gagtgggaat aacctactcc aaactcccgg
    28081 cttgtccggg agtttgaacg caaaattgcc tgatgcgcta cgcttatcag gcctacgcaa
    28141 tctctgcaat atattgaatt tgcgtgcttt ttaggccaga taaggcgttc acgccgcatc
    28201 cggcactctg tgccagtaat ctgaaactcc tacgttgttc aggagttttt tatccgcttc
    28261 tggacatttt ctctacagaa caatcgttag cccggaaggt cgaatctgtg actcttattt
    28321 tcacggacga accagatgaa agcttcactg gcgctgctca gcctgctaac ggcatttacc
    28381 agccactcct taaaatctcc cgccgttcca ccaaccgtgg tacaaatcca ggccaatacc
    28441 aaccttgcca tcgcagacgg tgccagacag caaatcggca acacgctatt ttacgatccg
    28501 gcgtatgtgc ggcttaccta tcctggcggt gatgtcccgc aagaacgcgg tgtatgttcc
    28561 gatgtggtga tccgtgcatt gcgcagccag aaggtcgatt tgcagaaact ggttcacgaa
    28621 gatatggcga agaattttgc cgagtacccg caaaaatgga agttaaagcg cccggacagc
    28681 aacatcgatc accgtcgggt gcctaatctg gaaacctggt ttagccgcca caacaaaaca
    28741 cgccccatca gtaaaaatgc cggtgactat caagcgggcg atattgtctc ctggcgatta
    28801 gataacgggc tggcgcatat tggggtggtg tcagatggct tcgcccgcga cggtacgcca
    28861 ctggtgatac ataacattgg cgcaggcgcg caggaagaag atgtgctgtt tagctggcgg
    28921 atggtggggc attatcgtta ttttgttaaa taagcgatcg ccccacatga agaaaaaatt
    28981 cagatgcttt ttacactgac agcttctttt ttcttacggc tcaccagcgc cagtgccagc
    29041 acaatcagca caataccgct accttcaacg gcccccggat tctcaccgag cagccaccag
    29101 gaaaagagta cgccgcaaac gggaacggcc agcgtgctta agctggcaat actggcaggc
    29161 aagtttttca atacaaacaa ccataagctc cacgccagcg ccgtcgccag aatcgcactg
    29221 taggccagcg cccagaacac ggtgggctgc cagtcaattt cacgttgcgg caccagtaaa
    29281 gcgaccacac tcatcaccag cgccgcatag agcatctgcc aggatgttaa cgataataaa
    29341 tccacgcgcg gatgacgggt gtataggcgt ttagcaacaa tcgcgctcgc cccccaacta
    29401 acaccggaga ggattgccag catggcactt ttcatcgaag agaaatcgag ttgccacggc
    29461 tgcaacacca aaaataagcc gaaagcggca atcagaatcg cgaaatattg cccacgtcgc
    29521 aggcgttcac cgagaaacaa cgcggcgaaa atcaccaccc agaacggcat ggtatagctc
    29581 aggatcgcca ccttccccgc acctccgctg accaacgccc actgcgccag accaaccatc
    29641 ccgcaggttt gtaacagggc aatggctaag gtgtatttaa acggcgtcgg gtgcattccg
    29701 cgaccacgta ataaaaggac gatgaataaa acgagagcgc cgaaaatgca gcgtaaggcg
    29761 gtaaagtcga aggcaccgat gtaactggtg acttgcttca tgaaaatcca gctataactc
    29821 cagataagtg tgagcacaac caggccactg attgccagtg ggttgctctt tcctgcggca
    29881 gacatgagag atccagtgtg tagttttcct gtggacacta tacgccggta aagaaacttc
    29941 agcgactgcc tgaaagacag tcactgaaga aggtcagatt acagcaggtc gaaacggtcg
    30001 aggttcatca ctttcaccca tgccgctacg aagtctttaa caaacttctc gtgggcatcg
    30061 ctgctggcgt aaacttccgc taccgcacgc aggacagagt tagaaccaaa taccagatcc
    30121 gcacggctgg ctgtgtattt cacttcgccg gtttcgcggt cacgtccttc gaacagctct
    30181 ttcgattcgt cagtcgcttt ccactcgtaa cgcatatcca gcaagttcac gaagaagtca
    30241 ttgctcaata cgccaacgcg gtcagtgaag acgccgtttt tgctgctatc gaagttggca
    30301 cccagtacac gcatcccgcc caccagcgca gtcatttccg gcgcggtcag cgtcagttgc
    30361 tgtgctttgt cgatcagcag tgactcggtg gtggaaacgt ccagacgagc gcgatagtta
    30421 cggaaaccgt cagcaattgg ctccagcagc tcaaacatct caatgtcagt ctgatcctga
    30481 cgcgcatcaa cgcgacccgg cgcaaacggt acatgaatgc tcaaacctgc ggcgcttgcg
    30541 gctttctcaa caccaaccac accagccagc acgatgatat ccgccagcga ggctttacca
    30601 gactctttct ggattttctc cagaacaggc agagcacgaa cggctgcggc gttcacatcc
    30661 cagtcgcgct gcggcattaa tgccagacgc gcaccgttgg caccaccgcg tttgtcgcca
    30721 ccacggaagg tagaagcaga tgcccaggcc accgatacca gctcactaac agacagacca
    30781 gaatccgcaa tcgcgaattt cagatcgata atgtcctgct cggtcgggtt gtagatcggc
    30841 tgcggcagcg gatcttgcca gatcagatct tctttcggca cttccggccc gatgtagcga
    30901 gatttcggcc ccatatccct gtgcgtcagt ttgaaccagg cacgggcaaa ggcttcgttg
    30961 aacgcctgcg gatcgttgag gaaacgacga gagatcttct cgaactcagg atcaaaacgc
    31021 agcgtcaggt cggtcaccag cattgtcggt ttacgtttct tcgacggatc gaacggatcc
    31081 gggataattt ccggtgcgtc taccgcttcg aactggattg ctccagccgg actgcgggtc
    31141 tgtacccact catatttgaa caggttctcg aagaaatagt tgctccactg ggtcggcgtc
    31201 tgggtccaga caacttccag accagaggta atggcatctg cgccaacgcc gctgccgtaa
    31261 gtgctcgccc agcctaaacc ttgttcttca atcggtgcag cttctggatc aggacctaca
    31321 tttgatgtcg gaccggcacc gtgagtttta cccagcgtat gaccacccgc aatcagcgcc
    31381 acggtttctt cgtcgttcat gcccatgttg ccgaaggtcg cacggatagc tgctgccgca
    31441 gaaagcggtt cgccgctgtg atccgggcct tccgggttaa cgtaaatcag acccatctcg
    31501 gttgcaccca gcggtgcttt cgccagcgct tccggatgac ggtgagtcag ccaggctttt
    31561 tcatcacccc agttaacatc cagatccggt tcccagacgt cttcacgacc ggcaccaaaa
    31621 ccgaaggtac ggaagccgga gttttccagc gccacgttac ctgcgaggat aaacaggtcg
    31681 gcccaggaga ttttctgacc atatttctgt ttgattggcc acaacaggcg acgcgcttta
    31741 tcaaggctta cgttatccgg ccaggagttc agcggtgcaa aacgttgctg accacgaccc
    31801 gcgccgccgc gtccatcgat tgaacggtaa gtacctgcgc cgtgccaggc catacgaata
    31861 aacagaccgg cgtagctgcc ccagtcggct ggccaccacg gctgagattc tgtcagcagg
    31921 gctttcagat cttttttcag gccgtagtaa tctaatttgc tgaattcttt gcggtagtca
    31981 aagtcctcac ccagcgggtt agaacgatta gaatgttggt ttaacaggtc aacacggagt
    32041 tgatttggcc accagtcgcg agtggttgtg cccgcccccg cgctctggtc gtgaccgccc
    32101 tgatggaacg ggcatttgcc agtggctgtc gtgttatgga tatcgtctga cgtgctcatc
    32161 aatgtgctcc cctctacagt gttaccgtta cgatacacag cgttagagag aagttataat
    32221 tgaattaatc cacggatgcg atagttgaga tcttacatat tgttggttaa agagatgtag
    32281 gtcaaattga tcgtaattaa gcttttttga ttatgtccga attcggacaa atgctttata
    32341 aaaaagggtt ttagcttcat atccttcaag taatgaggga gaaaacaagg ctgacaacct
    32401 tattttcccg ccctcatttc gaggcagcat tttgtgctct gtttaaaatt tgtgatcact
    32461 gtgtgatttt cacaaaagcc acactattta taaaccaggt cgaacaccca gcgtatggca
    32521 aatcgcgtaa ctcatttcag cgcggttaag cgtatagaag tggaaatctt tcactccttc
    32581 acggcttaaa atcttcacca tatccatggc aatattcgcg cccaccagtt tgcgggtttc
    32641 ggcatcatca tccaggccgt cgaacatttg cgccatccac gccggaatac gcacgttggt
    32701 catatcggca aatttcttcg cctgtttaaa gttagatacc ggcaaaattc ccggaataat
    32761 ttccacatca atgcccgccg atacacagcg gtcacgaaaa cgcaggtagc tttcgacatc
    32821 gaagaagaac tgagtaatcg cgcggttggc tccggcatcg actttgcgtt tcagattaag
    32881 caaatccgcc tgagcgcttt ttgcttccgg gtgaacttcc ggatacgccg ccacggagat
    32941 atcgaaatct gccacttctt ttaatagcgt caccaggtca gaagcataca tttctggctt
    33001 accacttccc ggcggcagat cgccacgcag cgccacgata tgacgaatac cgttattcca
    33061 gtagtcgcgt gcaatggtgc gcaactcgtc gggcgtcgca tcaatgcaag taagatgcgg
    33121 tgccgcttcc agaccagtgc gatctttaat gcctttaata atgctgtgcg tacggtcgcg
    33181 ctcgccggag ttcgcgccat aggtcaccga tacaaacttc ggtttcaggc tgctaaggcg
    33241 atcgatggag ttccacaggg tctgctccat ttcactggta cgcggcggga aaaactcgaa
    33301 cgaaacgtta atctgcccct ggacttctgc caggcgctga ttcagggcat cccgctggct
    33361 ggcgtgaaaa aagctcatac cttacctcat caatcgcttg tagttatatg ttgtgttgtg
    33421 cacatctatc cgtttagacg tccagatgta aagatgaagg aaaagccgaa gggcgtcaac
    33481 cgaaaaatga ccaatgatgg tgaggaaaaa tcagggaaga tgaaaaaact tcaggatggt
    33541 aagaaaaaga aaatccggta tgcaaagcaa accggactgc aaatataaac taaccatgta
    33601 cttattgctt cttgccggat tcgtcgtaaa cgcttaatcc ggcctaatcc tatgataatt
    33661 caatatattt cattagaaac cataaacccg aaaacatgag taccgggcat tattaaattt
    33721 ctgaaattac aacaactgtg ccagccggtt gatatccgac tgaatcgccc cggcggtgac
    33781 gtcgcgcccc gcgccaggcc cacggatcac cagcgggttg tcgcgatacc agcggctttc
    33841 gatggcaaag acgttatcgc acggcagcag tgatgccagc ggatggtctt cacgcaccgc
    33901 ctccacgccc acacgcgctt tgccgttggc atcgaaacgc gccacgtagc gcagcaccag
    33961 ccccatttcg cgggccgctt ccagccgttg caccatctgc tcgttaagtt catcgccatt
    34021 ttcaaagaaa tggtcgatgc tgccgccttc gcaatgagca ggcaccagcg attccacacg
    34081 tacctggtcc ggttcaatgt tgtaacccgc ttcacgcgcc agaattacca gcttgcgcat
    34141 tacgtctttg ccggagaggt cgtcacgcgg atcaggctcg gttaagccct gctgccacgc
    34201 ctgatccacc agctcggtaa acggcacgct accgtcgaat tgcaggaaca gccaggagag
    34261 cgtgccggag aagatcccgc tgatcgacaa aatagtatcg ccgctgtcga tcagatcgcg
    34321 cacggtgtgg ttgatcggca agcccgcacc gacggtggca ttgtacagcc agtgacgccc
    34381 ggttttttcg aaggcgtcgt ggatctggcg atatttattg ctgtcgctgg ctcccgccag
    34441 tttgttggcg ctgataacgt ggaaaccgtg gctggcgaaa tcaagatact gatcagcaag
    34501 ctgctggctg gcggtaacgt ccagcaccac taaatcatca tacggatggg cgcgcatcca
    34561 caggaacaac gactcttcat cctgctcaac cgcttcatcg ttgaagaagg ctaacgcgcg
    34621 gctggcgtcc agcccgtcat agctcaacag gctgcggcgg ctgtccacca cacctgccag
    34681 cacaaactca aagccggtac gtgccgaaag cgtgctctgc tcacgggcga acagttccag
    34741 ccaacgggaa ccgatattgc ccttaccgaa caataccagg ccgatgcgtt tttctgcgcg
    34801 gaagacggac tgatgcagcc cctgaatcag gctttcggtc gggccggtgc gcagtactgc
    34861 caccaggctg atgccgtcat cggactgcca ggtaaattcg accggctggc ctttcagttg
    34921 ctgccagaag cggtggcaat gcagcgggtt acgggtgacg cctgcaccga ccatcgccac
    34981 cagcgccagc ccctgacgca ggcgcagttc gccaggtaat cccgcttcgt cgaggatttt
    35041 cagcgcactg tcggccactt ctgaggtgta gcaaaattgc agcaactggc gatcgttatg
    35101 tacgccaacc gccagcgggc gtacctgcgc gcgtttcagg atttggtcga tctctttatg
    35161 cgccagtttg aaatcctgac tggcgggcac ctgaaactca atcaaacaga catcatcgtg
    35221 gctggtgaca atacgcgcac cagtaccgga ggccagcacg cgttcaatgc gcgtggaacc
    35281 ttgatccggc gtgtagctac agcgcagttg caggtcgatt tcgctgccag aaaccggctg
    35341 taaagtacgg gcgtgaagaa cgggagccgc caggcgcgcc agttcgctgg cctcatccag
    35401 acgcagcaac ggcagcaggc aggcatcttt cactttacgc gggtcggcac tgtatacccc
    35461 ggcgacgtcg ctccagatgg ttacgcgaga aacacccgcc agcgcaccga tttgtgtcgc
    35521 ggaatagtcg gaaccgttac gccccagcag caccgtttca ccggcgttgt tgcggctgat
    35581 aaatccggtc accaccagac gtttgcccgg atgttgcacc agcagctgtt gcagcaacgg
    35641 gtaagaaagc ccttcatcaa cctgcggttg tgcggcgcgt tcagcgcgta aaaactcgcg
    35701 ggcatcaagc caggccgctg gcagcccttg ttgattaagt accgcagaca tcaggcgtgc
    35761 cgaccatact tccccgtggc ccaccacttc cgcatacact gcgtcgttaa taccgctgtc
    35821 gagcagcgcc gccaggcgct caaggtcgct gacaaaagcg ctaatgaggc tatcagcttc
    35881 ttcagcgggt agcagaccgc taatcagatc gcactgatag cgacgcagcg tttgttgaac
    35941 ctgatgcgca gagagacgat cggtctggct tagtttcaac cagttaatca actggttagt
    36001 ggtgctaccg gcggcggaaa ccaccatcat atcgtcaggc tgagagtact ccgccataat
    36061 gcccgcaaca cgcaaataac acttcacatc agccagacta ctgccaccaa atttatgcag
    36121 ttgacgacct ttcgcccctg cctgcgcaat cacactcatt tttacccctt gtttgcagcc
    36181 cggaagccat tttccaggtc ggcaattaaa tcttcgccat cttcaatacc ggtggagata
    36241 cgcagcagcg tctcggagat cccggcggca gcacgcgctt ctggtgccat gcctgcatgt
    36301 gtcatggttg cggcgtgaga gattaaactt tccactcccc ctaatgattc cgccagcgta
    36361 aacaacgaca gcccgcccag gaaacgacgc agcgtctgct catcgccatc cagttcaaaa
    36421 ctcaacattg cgccaaagcc tttttgctgg cgcgcggcaa tttcatgccc ctgattttcc
    36481 ggcagcgacg ggtgatacag ttttttcacc aacggctggg tttgcagata tttcacaatc
    36541 gcctgcgcgt tgcgctgggc cagctccata cgcggcacca gcgttcgcaa cccgcgtagc
    36601 agcagatagc tgtcaaacgc gccgcccgtc acgccaatat tgtttgtcca ccaggcaagt
    36661 tcagtgacaa cgtccgggtc tttagcaatc accacgccag ccaccacgtc agagtgaccg
    36721 ttcagatatt tcgtacatga atgcaacacc agatcggcac ccaatgccag cggattttgt
    36781 aatgccgggc ttaagaaggt gttatccacc acgctcaccg ccccgacttc ccttgccaga
    36841 tggcagattt tcgcaatatc cacgacgcgt aacaatggat tacttgggct ttctaccagt
    36901 accagtttag gtttttctgc cagcgctgcc cgtaatgcct gttcatcgcc ttgatcaaca
    36961 aacaacacgc gatagcaacc gcgtttcgcc agactgtcga acaggcgata gctaccgccg
    37021 tagcagtcgt gcggcgcaac cagcagatcg ccaggtttca aaaagacggt cgttaccaag
    37081 tgaatcgcgg acatgccggt attagtaagt actgcgccag caccgccttc cagttctgcc
    37141 agcgcacgct gaaccacatc gcgcgttggg ttgccgcgac gcgagtaatc atgcgcgcgc
    37201 ggttcattaa atccggtaaa gttataggtg ctggaaagat ggatgggagg gacaacgcaa
    37261 ccatactgtt cgtcgtcatt taacccgcta cgcactgcga tggtggcctg tttacgcgtc
    37321 atgtgatgaa gtttcctggg ctttgtcggt gaaatgtcag gcaccagagt aaacattgtg
    37381 ttaatggacg tcaatacatc tggacatcta aacttcttta cgtatagatt gagcaaatcc
    37441 caaatagccg ttaaaattat atgcattatc acgccgacag gtgcattaca cgatgtcacg
    37501 gtaacgcctg tacggtaaac tatgcgggtt tacggtcagt acccacataa attgtgtggt
    37561 ctggtctcaa tttattgacg aagaggatta agtatctcat ggctgaatgg agcggcgaat
    37621 atatcagccc atacgctgag cacggcaaga agagtgaaca agtcaaaaag attacggttt
    37681 ccattcctct taaggtgtta aaaatcctca ccgatgaacg cacgcgtcgt caggtgaaca
    37741 acctgcgtca cgctaccaac agcgagctgc tgtgcgaagc gtttctgcat gcctttaccg
    37801 ggcaaccttt gccggatgat gccgatctgc gtaaagagcg cagcgacgaa atcccggaag
    37861 cggcaaaaga gatcatgcgt gagatgggga ttaacccgga gacgtgggaa tactaaagca
    37921 aaaaagagcg gcgcggagtg gaatcgcctg atgcgctacg cttatcaggc ctacgtcata
    37981 ttgcaattta ttgaatttgc acgaacttgt aggccggata aggcgttcac gccgcatccg
    38041 gcataaacaa cgagcacgtt gtctgcgacc caccgctttt tatacatgga cgtttaacta
    38101 tgaaaaacag gctgctgatc ctcagcctgc tggtttctgt acctgccttt gcctggcagc
    38161 cacaaaccgg cgacatcatc tttcagatct ctcgctcatc gcaaagtaaa gcgatccaac
    38221 tggcgaccca ttccgattat agccacaccg gtatgctggt gatacgcaac aaaaagccct
    38281 acgtttttga agcggtcggc ccggtgaaat acaccccgct caagcagtgg atcgcccatg
    38341 gtgaaaaggg caaatacgtt gttcgccgcg ttgaaggcgg actgagtgtt gaacaacagc
    38401 aaaaactggc gcaaacggta aaacgttatc tcggtaaacc gtatgatttc agcttctcat
    38461 ggagcgacga tcgccagtac tgttcggaag tggtgtggaa ggtttaccag aacgcgctgg
    38521 gaatgcgcgt gggcgagcag cagaagttga aagagttcga tctcagcaac ccgctggtcc
    38581 aggctaagct caaagaacgc tacggcaaaa atattccgct tgaggaaacg gtagtttcac
    38641 cacaagccgt tttcgacgcg ccacaactca ccacggttgc caaagagtgg ccgctgtttt
    38701 cgtggtaatg gatgatgaaa aaaataattc ccgccgtagt ctgtttgttg ctttgtagtt
    38761 gcacgacctt tccgcaaact gtcgctccgg taaacggtga tgcctccaat tagttgaatt
    38821 aaggatataa tactcgcttt taaggttgtt tcatggtcac agttaacctt cattgccccc
    38881 gttgccagtc cgttcaggtt taccgtcacg ggcagaaccc aaaaagacat gatcgattcc
    38941 gcggccgtga ctgtcaccgg gtatttcagc tcagttactg ttacgagccc cgtaaaccgg
    39001 gagttaaaga ccaaatcgct gaaatgactt tcaacggtgc cggggttcgc gatactgccc
    39061 gtacgctgaa aatcggcatt aatacagtca tccgaacttt aaaaaactct cgccacgaag
    39121 aataacgtca tccccggtcg ctcatgctga tgtggcactc atctgcgaac ttagtcagca
    39181 atggagcttt gtcggcagta aagcgcgaca gcactggctc tggtacgtgt acaacacgaa
    39241 aactggtggt gttctggcct acacttttgg cccccggact gacgaaacct gtcgtgaatt
    39301 gctggcgctg cttacccttt taccatcggc atgttgacca ctgacgaatg gggtagttac
    39361 accagagagt taccgaagga aaagcatctg actgg
//
LOCUS       DAJVUK010000017        39047 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.017, whole genome shotgun sequence.
ACCESSION   DAJVUK010000017 DAJVUK010000000
VERSION     DAJVUK010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39047
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.017"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..720
                     /locus_tag="OQQ57_000871"
     CDS             <1..720
                     /locus_tag="OQQ57_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HCS1955718.1"
                     /translation="PPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVVLKT
                     KSGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTGARL
                     ASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQ
                     AEIKLNDTLCVTISEGSQQKYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNF
                     AQKHQVASGADWNIDVKKCAK"
     gene            complement(765..2927)
                     /gene="uvrD"
                     /locus_tag="OQQ57_000872"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(765..2927)
                     /gene="uvrD"
                     /locus_tag="OQQ57_000872"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HCS1955719.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCLPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTMHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV"
     gene            complement(3011..3727)
                     /gene="yigB"
                     /locus_tag="OQQ57_000873"
     CDS             complement(3011..3727)
                     /gene="yigB"
                     /locus_tag="OQQ57_000873"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HCS1955720.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            complement(3727..4623)
                     /gene="xerC"
                     /locus_tag="OQQ57_000874"
     CDS             complement(3727..4623)
                     /gene="xerC"
                     /locus_tag="OQQ57_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HCS1955721.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            complement(4620..5327)
                     /locus_tag="OQQ57_000875"
     CDS             complement(4620..5327)
                     /locus_tag="OQQ57_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HCS1955722.1"
                     /translation="MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLH
                     EIALMLPELLERWIERV"
     gene            complement(5324..6148)
                     /gene="dapF"
                     /locus_tag="OQQ57_000876"
     CDS             complement(5324..6148)
                     /gene="dapF"
                     /locus_tag="OQQ57_000876"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HCS1955723.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            complement(6193..6387)
                     /locus_tag="OQQ57_000877"
     CDS             complement(6193..6387)
                     /locus_tag="OQQ57_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004987677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1955724.1"
                     /translation="MKNVFKVLTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGMVHPR"
     gene            6850..7170
                     /gene="cyaY"
                     /locus_tag="OQQ57_000878"
     CDS             6850..7170
                     /gene="cyaY"
                     /locus_tag="OQQ57_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HCS1955725.1"
                     /translation="MNDSEFHRLADQLWLTIEEHLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            complement(7210..9756)
                     /gene="cyaA"
                     /locus_tag="OQQ57_000879"
     CDS             complement(7210..9756)
                     /gene="cyaA"
                     /locus_tag="OQQ57_000879"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HCS1955726.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS"
     gene            10143..11084
                     /gene="hemC"
                     /locus_tag="OQQ57_000880"
     CDS             10143..11084
                     /gene="hemC"
                     /locus_tag="OQQ57_000880"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HCS1955727.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            11081..11821
                     /gene="hemD"
                     /locus_tag="OQQ57_000881"
     CDS             11081..11821
                     /gene="hemD"
                     /locus_tag="OQQ57_000881"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HCS1955728.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            11843..13054
                     /gene="hemX"
                     /locus_tag="OQQ57_000882"
     CDS             11843..13054
                     /gene="hemX"
                     /locus_tag="OQQ57_000882"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCS1955729.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPAPAPAPAPAPQ
                     GDTPAAAPQGE"
     gene            13057..14253
                     /gene="hemY"
                     /locus_tag="OQQ57_000883"
     CDS             13057..14253
                     /gene="hemY"
                     /locus_tag="OQQ57_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HCS1955730.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTL
                     QNNPPQ"
     gene            14932..15093
                     /locus_tag="OQQ57_000884"
     CDS             14932..15093
                     /locus_tag="OQQ57_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000395868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955731.1"
                     /translation="MEFSFSPKLLVVAVAAALPLMASAADTPSTATARKGFAGYDHPN
                     QYPQNAAIY"
     gene            complement(15177..16412)
                     /locus_tag="OQQ57_000885"
     CDS             complement(15177..16412)
                     /locus_tag="OQQ57_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCS1955732.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLDFYRRAVKLQAKYGAGRKISN
                     SFQTNGVLLDDKWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLH
                     APGDIQGELTEWSVRPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLLVVNK"
     gene            complement(16559..16635)
                     /locus_tag="OQQ57_000886"
     tRNA            complement(16559..16635)
                     /locus_tag="OQQ57_000886"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16599..16601),aa:Pro,seq:tgg)
     gene            complement(16678..16764)
                     /locus_tag="OQQ57_000887"
     tRNA            complement(16678..16764)
                     /locus_tag="OQQ57_000887"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16728..16730),aa:Leu,seq:cag)
     gene            complement(16785..16860)
                     /locus_tag="OQQ57_000888"
     tRNA            complement(16785..16860)
                     /locus_tag="OQQ57_000888"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16825..16827),aa:His,seq:gtg)
     gene            complement(16919..16995)
                     /locus_tag="OQQ57_000889"
     tRNA            complement(16919..16995)
                     /locus_tag="OQQ57_000889"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16959..16961),aa:Arg,seq:ccg)
     gene            complement(17098..18483)
                     /locus_tag="OQQ57_000890"
     CDS             complement(17098..18483)
                     /locus_tag="OQQ57_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1955733.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAVGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNESGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(18674..19414)
                     /gene="rffM"
                     /locus_tag="OQQ57_000891"
     CDS             complement(18674..19414)
                     /gene="rffM"
                     /locus_tag="OQQ57_000891"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HCS1955734.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(19417..20769)
                     /gene="wzyE"
                     /locus_tag="OQQ57_000892"
     CDS             complement(19417..20769)
                     /gene="wzyE"
                     /locus_tag="OQQ57_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA oligosaccharide polymerase"
                     /protein_id="HCS1955735.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPR
                     RPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTREVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG
                     "
     gene            complement(20766..21845)
                     /gene="rffT"
                     /locus_tag="OQQ57_000893"
                     /gene_synonym="wecF"
     CDS             complement(20766..21845)
                     /gene="rffT"
                     /locus_tag="OQQ57_000893"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HCS1955736.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRVLAIAAGEVA"
     gene            complement(21842..23092)
                     /gene="wzxE"
                     /locus_tag="OQQ57_000894"
     CDS             complement(21842..23092)
                     /gene="wzxE"
                     /locus_tag="OQQ57_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HCS1955737.1"
                     /translation="MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(23094..24224)
                     /gene="rffA"
                     /locus_tag="OQQ57_000895"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(23094..24224)
                     /gene="rffA"
                     /locus_tag="OQQ57_000895"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HCS1955738.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFG
                     EFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(24229..24903)
                     /gene="rffC"
                     /locus_tag="OQQ57_000896"
                     /gene_synonym="wecD"
     CDS             complement(24229..24903)
                     /gene="rffC"
                     /locus_tag="OQQ57_000896"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HCS1955739.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRV
                     QAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA
                     TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(24881..25762)
                     /gene="rfbA"
                     /locus_tag="OQQ57_000897"
     CDS             complement(24881..25762)
                     /gene="rfbA"
                     /locus_tag="OQQ57_000897"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HCS1955740.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLVQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDQERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(25781..26848)
                     /gene="rffG"
                     /locus_tag="OQQ57_000898"
     CDS             complement(25781..26848)
                     /gene="rffG"
                     /locus_tag="OQQ57_000898"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HCS1955741.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLIYAGNLMSL
                     APVAQSDRFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVVHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWKQVQDGSYQGERLGLKG"
     gene            complement(26848..28110)
                     /gene="wecC"
                     /locus_tag="OQQ57_000899"
     CDS             complement(26848..28110)
                     /gene="wecC"
                     /locus_tag="OQQ57_000899"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HCS1955742.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(28107..29237)
                     /gene="wecB"
                     /locus_tag="OQQ57_000900"
     CDS             complement(28107..29237)
                     /gene="wecB"
                     /locus_tag="OQQ57_000900"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312746.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HCS1955743.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKAPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELVANYPFIDPNKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLKDENEYQTMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(29293..30339)
                     /gene="wzzE"
                     /locus_tag="OQQ57_000901"
     CDS             complement(29293..30339)
                     /gene="wzzE"
                     /locus_tag="OQQ57_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HCS1955744.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(30351..31454)
                     /gene="wecA"
                     /locus_tag="OQQ57_000902"
     CDS             complement(30351..31454)
                     /gene="wecA"
                     /locus_tag="OQQ57_000902"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HCS1955745.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMALGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(31694..32953)
                     /gene="rho"
                     /locus_tag="OQQ57_000903"
     CDS             complement(31694..32953)
                     /gene="rho"
                     /locus_tag="OQQ57_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HCS1955746.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(33038..33139)
                     /gene="rhoL"
                     /locus_tag="OQQ57_000904"
     CDS             complement(33038..33139)
                     /gene="rhoL"
                     /locus_tag="OQQ57_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide RhoL"
                     /protein_id="HCS1955747.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(33280..33609)
                     /gene="trxA"
                     /locus_tag="OQQ57_000905"
     CDS             complement(33280..33609)
                     /gene="trxA"
                     /locus_tag="OQQ57_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HCS1955748.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            33740..35005
                     /gene="rhlB"
                     /locus_tag="OQQ57_000906"
     CDS             33740..35005
                     /gene="rhlB"
                     /locus_tag="OQQ57_000906"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HCS1955749.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            35139..36623
                     /gene="gppA"
                     /locus_tag="OQQ57_000907"
     CDS             35139..36623
                     /gene="gppA"
                     /locus_tag="OQQ57_000907"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HCS1955750.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(36670..38691)
                     /gene="rep"
                     /locus_tag="OQQ57_000908"
     CDS             complement(36670..38691)
                     /gene="rep"
                     /locus_tag="OQQ57_000908"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HCS1955751.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKYYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
BASE COUNT         9665 a        10660 c         9881 g         8841 t
ORIGIN      
        1 ccaccgtata acatctggga aggcgcttat cgcctgtatc agactgccag ttactggccg
       61 caaggttcgg tgtttgttag cgtggtcgat ccgggcgtag gcactgaccg taaatcggta
      121 gtgctgaaaa ccaaaagcgg tcaatacttc gtttcaccag ataacggtac gctcactttg
      181 gtggcacaaa ctctgggtat tgatagcgtc cgggaaatcg acgaaaaagc taaccgcctg
      241 aaaggttctg aaaagtcata taccttccac ggtcgtgacg tgtatgccta caccggtgca
      301 cgtctggctt ccggggcgat tacgttcgaa caggtggggc cagagcttcc agcaaaagtt
      361 gtcgaacttt cttatcagaa agcaaaagca acaaaaggtg aagtgaaggg caatatcccg
      421 attctcgata ttcagtacgg caacgtctgg agcaatatca gcgacgagtt gctgaatcag
      481 gcagaaatca aactcaacga cacgttgtgt gtgaccattt ccgaaggttc ccagcaaaaa
      541 tacgcaggga aaatgccgta tgtcgcaagc ttcggcgatg tgccggaagg ccagccgatg
      601 gtgtatctga acagcttatt gaatgtttcc gtggcgctga atatggataa tttcgcgcag
      661 aaacatcagg ttgcgtctgg tgctgactgg aatattgatg tgaagaagtg cgctaagtaa
      721 ggtgctgatg cggaatgcgg tgtggcgcac cgcatcccgc aacgtcacac cgtctccaac
      781 cgggcataag ccgccaccag ccatttaata ccctggccct ggaatgccac ctgcaaacgg
      841 ctatgttcac cgctgccttc catattgacg atggtgcctt caccaaactt agcgtggcgt
      901 acacgctggc cgagcttgta gccgctgtcg ttctcgacca tcggcgtacc catccgctga
      961 tggctgaccg ggcggcttac cgtggcgcgc aggcgcacct cttccacaca ctcttccggc
     1021 agctcgccaa taaagcgcga cgggcgatgg taaacctctt tgccatacag acggcgagtt
     1081 tccgcgtagg tcagcgtcag tttctgcatc gcgcgggtta cgccaacgta ggccagacgg
     1141 cgttcttctt ccagacgccc gccttcatcc agcgacatct ggcttgggaa catgccctct
     1201 tccataccga cgataaacac ctgcgggaac tccagacctt tcgccgagtg catggtcatc
     1261 agttgtaccg catcctgcca ggtatccgcc tgcccttcgc ctgcttccag cgccgcatgg
     1321 gataggaacg cctgcagcgg cattaaatct tcgtcttctt cgttgtagct gaactggcgc
     1381 gttgccgtca ccagttcctc taagttttcg atacgcgtct gacctttttc gcccttctcc
     1441 tgctcgtaca tggtacgcag gccggagtct ttaattaccc ggtcagtctg tacatgcagc
     1501 ggcatatcgg cagtttcctg cgctaaggcg tcgatcagtt ccataaaccg ctgtaaggcg
     1561 ctggcagcac gtccggcgag ggctttttcc tgcaacagtt cacgacatgc ctgccagagt
     1621 gttaactggc gatcgcgcga tgtctgacgt accacgtcca gcgtccggtc accaataccc
     1681 cgcgttggcg tattcaccac acgctcaaag gccgcgtcgt cgttacggtt ggcaatcagg
     1741 cgcagatacg agagcgcatc tttgatttcc tggcgttcga agaagcgcat cccgccgtaa
     1801 atacggtacg gcatactcgc ctgcaacagt gcttcttcca gcacacgcga ctgggcgtta
     1861 ctgcggtaga gaatggcgca ctcggcaagc gccccgccgt tgtcctgcca ggttttgatg
     1921 cggttaacca caaaacgcgc ttcatcgagt tcgttaaaag cgcaatagag ggaaataggc
     1981 tcaccgtccg cgccatcggt ccacagtttt ttacccagac gcccgttatt gttttcaatc
     2041 agggcgttag cggcgctcag aatattgctg gtagagcggt agttttgctc cagacgaata
     2101 gtttcggcac cggggaaatc attaaggaaa cgctgaatat tctccacctg cgccccgcgc
     2161 cagccgtaga ttgactggtc gtcatcaccg acgatcatca ctttgccggt gtcgcccgcc
     2221 agcaggcgga tccacgcgta ctgaatgttg ttggtatcct ggaattcgtc caccaggata
     2281 ttggtaaaac gttcgcggta gtgttgcagg atatgcggct tgttaagcca caactcgtga
     2341 gcgcgcagca gcagctcggc gaagtccacc aggcccgcgc ggtcacacgc ttcctgatac
     2401 gcctgataca ccttctgcca ggtctgctcc accggattac cgtagctttg aatatgatgt
     2461 ggacgcaggc cttcatcttt ctggctgttg atgtaccaca ttgcctggcg cggcggccac
     2521 tgcttctcgt cgaggttcat cgccttgatt aggcgtttga gcaggcgtag ctggtcctcg
     2581 ctgtcgagga tctgaaaatc ctgcggcaga ttggcgtcca tatggtgcgc acgcagcaga
     2641 cggtgcgcca gcccgtggaa ggtgccgacc cacatgccgc cctggctggt gcccattagc
     2701 tgcccgatac gatgacgcat ctccgccgcc gctttgttgg taaacgtcac cgccataatc
     2761 gagtatggca agcagttttc cacgctcatc agccaggcga tacgatgcac cagtacgcgc
     2821 gtcttaccac tgcccgcgcc cgccagcacc agaaggttgc tgcgtggcgc ggccaccgct
     2881 tcgcgctgtt tgtcattaag gctgtcgagc aggtaagaaa cgtccattgg caccgccgcg
     2941 taaaaatagg ttgggcggag aagcgcaacg ccctccgcca aaaagctggg tatatataca
     3001 gatttgctga ttatatcagc gaggtcagag atgccaaccg ggaaatttcc agatgcggca
     3061 gtaaacggct gtcccaggtt tgcatcagat cgccattttc cggtctgatc caacaggcct
     3121 gcattccgct gcgaattgcc ccacccacgt cagtggtgag atcgtcccca acatgtaaga
     3181 tctcgccgat cggcacgttg agtttttccg cagccagaaa gtacatatcg ctgaacggtt
     3241 ttgagcgccc gtgcgggcca gcgcgcagca caaactcaaa ataatccccc aaaccaaaca
     3301 gttccggctg ggcgttaccg ttggtgatcg ccaccagcgg ccatttcttc gccagctgtt
     3361 ttaaggtgtc gtgagtttgc tgcgggacgt cgattcggct gcgccatttg gcaaagttga
     3421 tcattgctgc gtgtgcgcct gcactggctt cttcggcact cagcccggcg tcgagcatcg
     3481 cttgttcaat cgaacgaaaa cgccagcgcg tcacgtcgtg ataaatctcg ggttccgctt
     3541 cccgtaccgc ctggcgcagg cgttgcagat cttcattctg gaagctgcgc agcgccggat
     3601 gataattttg cacaaaggta agcgcctctc gctcggtgcg caaaatcacc ggacggttat
     3661 cgtaaagggt atcatccagg tcaaaggtga gcgccgagat gcgccccaaa ggccggtaaa
     3721 aacgcattat ttcccccgtt tggcgcgtgg atgcgccgca tcgtacaccg aggcaaggtg
     3781 ttgaaaatca agatgagtat agatttgcgt ggtggagagg ttggcatgac ccagtagctc
     3841 ctgcacacca cgaagatcgc cgctcgactc cagcatatgc gtagcgaacg agtgacgtaa
     3901 tttatgtggg tgaacgtgat tattcagccc ttgttttatg ccccattcgg caaagcgttt
     3961 ctgcacatta cgcgcggaga tacgcttgcc cagtttcgac agaaaaagcg cgtcgtcttc
     4021 gctaccaaac aggtcgcgca aatcaagcca gtgctcaatc cacgccacag cgttgcgacc
     4081 aatcggcagg cggcgctctt tgctgccttt ccccattacc cacacttcac cagactccag
     4141 gtcgaggtgt ttgatatcca gccccaccag ctcggaaaga cgcagaccag cgccgtacat
     4201 cacttccagc attgcacggt cgcgtacagc gaggggatcg ttgatatcaa tatccagcag
     4261 ccgattcata tcgtcgacgt cgatattttt cggcagatga cgcggcgctt tcggtgccga
     4321 aacacctttc gccgggttag ctttgagttc gttctggctg accagccagt caaaaaagct
     4381 acgtagcgca gaaagccgta acgccagact tgctgctccc agccctttac ggcgactgcg
     4441 tacagcaaaa ttgcgcacca tcgtcacatc acattgctgc cagctttgca ggccgttttc
     4501 gctggcaaaa ttgatgatcg cctcaagctg acgctggtag ttaagcaggg ttatcgggct
     4561 aagctggcgc tccacgctca gataacgtag gtagcgttct acatcggtgt gtaaatcggt
     4621 catacgcgtt caatccaacg ctccagaagc tccggcaaca tcagcgcaat ttcatgaagt
     4681 aactgcgttc cttgcccttg ttgatagtga ctggcatcgc gactggtaaa cagcacgaca
     4741 cccaaatcag catcgcttcc cagcatcgac atcgccaccg atcccaccgc tttcgcttcc
     4801 ggtagcacca ccagcagctc tggtccgtta agcggcccaa gatagtgctg ttcctgcccc
     4861 aaacgctgaa tacgcagcgg ttcgaaagac tgacggctta atgccagatg agtgtggttc
     4921 gacggcgcac ctaagcgcca gcgatccgga aacaggcgca gactcgcacc tgccaggccg
     4981 agatcgcgcg cccagcggtg aaagcgcatc agcatatcgt cgagactgct ggcggcggtg
     5041 agactgcgct gcaggtagag taggcgataa aacaggcctt cgttggcgat agcctgttcc
     5101 atcaacagcg ccatgttctc ttccagaaca tgaatatgat tacgtgcgcg ggccatgtgc
     5161 cactcgacca acgaaacggt gccgcgtacc ggatgtggca cacgtatcgc ttctactgcg
     5221 cgcgcattac ggataaaaaa ctcaggattt ttaatcagat aatcgacaac cgcccggtca
     5281 tcaagctccg tgagtgtttc ctgcagttct tcccctggtt gcttcataga tgaataaatc
     5341 cgtcgtagac atgtaccgcc gggccagtca tatataacgg gtgacccgga cctttccagg
     5401 cgatatcaag acgaccgccg gggagttcca cgcgtacttc ttcggccagc aaaccttgct
     5461 gaatccctac tgcaaccgcc gcacacgcgc cgctgccgca ggcctgggtt tctcctgccc
     5521 cacgctcata aacgcgtaaa cgaatatgct cgcgcttaac cacttgcata aaaccgatat
     5581 tggcgcgctc cggaaaacgc tcgtggcttt ccagaacagg accaagcgtt tctaccgccg
     5641 cggtatcgac atcatcgacc tgaatcacgc aatgcggatt tcccatcgac accacgccgc
     5701 ataagattgt ctgctcggcg gcgcgcataa tataggtctt ttccgctttg ttagcgcgaa
     5761 acggcacagc ggaaggttcg aagttgggtt cgcccatatt tacgcggacc agatcatcat
     5821 cggtgacggt cagaaccatc cgcccgttgg cggtgctgac gcggatatcg cgcttattgg
     5881 tcagcccttt caggcgcaca aaacgggcaa agcagcgcgc accgttgccg cactgcgcca
     5941 cttcactgcc atcagcattg aaaatgcgat agtgaaaatc cagttcagga tcatacggcg
     6001 gctcaaccac cagcagctgg tcaaacccta cccccaggtg ccgatccgcc agccgacgaa
     6061 tcagctccgg tgaaaaaaag acattctgcg ttaccgcgtc gacgaccata aaatcgttgc
     6121 caaggccatg cattttcgag aactgcatca tttactccaa tcacgcgggt acagaaactg
     6181 acttttagta attcacctgg gatggaccat cccagtggcg cgatcgtttt tatccggcac
     6241 cgtggattgc gtttgcgtct ctaccggttt ggtcggcggc ggtgcatttt tatctgcagg
     6301 cgggaaatag agcggacctt tcagaccgca gcccgtcagg ctgaagagag taagtaatac
     6361 agtgagtacc ttaaacacgt ttttcattat ggattgcctg taaagttcat cgctttctgc
     6421 tttctatcat cgcaggagaa ggcgtaaaag caagcgttta gcgactcttt atgaagtctg
     6481 aaaagtgagg aaatgctgcg agtataacgc ttactcgtga ggatttatgt tctgctggca
     6541 gtttcgtgat cggcacctcg cgccaggatg gctttatgca ctatcgcaat gtggtttgtt
     6601 tgttggcttt tttagttccg tcagcgtgag gatgctcgct cggtaaacct gatcataatg
     6661 tttaccagaa acagggaaag gcgtggtgta actgcgccct aatgaagaga caaatctttc
     6721 gccacacaga gacatcatta ttccggtgac ggatgaatca tgccggaacg cagcagcaga
     6781 ggtgcaaact ttgaagccct gaccccatgc cgctatactg ccgccatcac ttaaaaacag
     6841 gatacaacaa tgaacgacag tgaatttcat cgcctggctg atcaactgtg gctgaccatt
     6901 gaagagcatc tggacgactg ggatggcgac agcgatatcg actgcgaaat caacggcggc
     6961 gtgctgacca ttacctttga aaacggcagc aaaatcatta tcaaccgcca ggaaccgctg
     7021 caccaggtat ggctggcaac caaacaaggc ggctaccatt ttgatctgaa aggcgatgag
     7081 tggatttgcg atcgcagcgg cgaaaccttc tgggatttgc tggaacaggc ggcgacgcag
     7141 caggcgggtg aaacagtcag tttccgctaa gattgcatgc cggataagcc tcgctttccg
     7201 gcacgttcat cacgaaaaat attgctgtaa tagcggcgta tcgtgatcct gattggcagg
     7261 cggcatgtta ccgatagatt ttgtgcggaa cggaatcacc tgttcacgac catcaacctt
     7321 cacaatctga tagaactgcg gcaggttgaa gttgatgaag cttgagccgt aggtgaagcg
     7381 gtcgtgcgat gacgagtaga agcgactgac gtcacgcacc agttcctctt tgctgccttc
     7441 gcagtggtga tacacctcaa cccggttgct ttcgtcaaga atgtagatat taaagccatt
     7501 ctcgtcttgc gtttcttcga agaagaactg gatgatccct tcactagcaa agccgtccac
     7561 caccgccggt aatttgacgt gattggtttc aacctgcact gacaggccgt gcagtttgtt
     7621 atgcgaaata gcgccataaa actcgatggc gttctccagc ttctgtaccg atacattcag
     7681 gcgttcgaag aacaagcccc aggtttgacc agaaacgcgc agcgccttga aacgcccggt
     7741 ttcctggcgg gtgctggaaa ggcgcagttc aatacactca gaaaccagtt gctgcacgcg
     7801 agtacggatt aacccgcgca gatgctggct ataacagaag acttccacgc tatctggcgg
     7861 tgcggcgtcc tgatgcattt tgccgagaat agttttcagg gcttcgatca tcgattgctc
     7921 gccgttgaag tgcagcgtac gcacttcgtt ccacgagttg cggtacagca ggtcaacgct
     7981 acctaccagg caattttgat tctcgccaaa gctgaagaca tccagcttac ggaaatcaaa
     8041 atgcaccacc tgattgcgga acgccgctgt cgggtcatat tccaggttaa cgataatcgc
     8101 cagatggcgg atctcacacg ggctgtagag cgccttcggt gtcggtgcag gtaagcgcag
     8161 cgggaaatgg tgcgacacgt cggcgaccat ctcctgcaac ttaggcaaat cgacaatgcc
     8221 gttaccttta atatacaaac gggtgcgcga ggtcagcagg ccgttaaacc atgcccacgc
     8281 caccagtttg ttcaggtaac ggttatattc cagcggctga tggctgatga tcgactcaat
     8341 atttggcgcg cggttataca gataccaacc tgaacggtta gcacggcccg gcggcacata
     8401 aataaaggtc agattcggtt ccgagagatc gggtgaaatc tgcgggttta ccagcgtcac
     8461 tttacctggt aatgcttcaa acgcggcata cagcttacgc gtcagcacgc cgatatcctg
     8521 cggactggcg gagacgctaa ggttattgcg acgcgcaaag cggatcagat tacggtagct
     8581 ctgcatcatc gcgtcgagca actcgttgtg cgcctcacgc acctgatcaa tcttccagtt
     8641 agcgcggtta tcgagcattg ccagacgagc ttcgtcccaa ccccactcgc tcactaactg
     8701 gctcaacact gcgcgacgcc agcctacgca ggcgcgttca cggctgagct tttcgcacac
     8761 ttttaaatag aagcagcgac gtactaaatc cagacgggta aaatcttcaa tcgccgtcag
     8821 gtattcagta acacgctcca gcatcatgca gtatggatcg agaccaaacg atacaatctc
     8881 accgtcgtgc aaacgctgtt tgatatcttt cgccagcaga cgtgggttcg ggtattccca
     8941 ggaataggct tccagcagca gtgttttcag taccgctttg tatggggaat cgatactctt
     9001 gtagagctgc caaaggctgg caccaaagta ctcttcagca gaaagcgagc ttaagccacc
     9061 gagatccagc cattcatttg gcgtcagcac gccctgcgcg taaagcgtca tcacatagtc
     9121 gtcgtaatgc tcttcttcgt cgcacggcac catattccac agaatacgct taccggcgag
     9181 acgcacggcg gtacgataaa attcgtcaag cagcagtata tgctgggtgg agccacaatc
     9241 ttcgcccccc aagctgccgc tttcattatg acggaagcgg ttttcatcaa tcaggaagaa
     9301 gctgacttcc acacccagcg aggcggccca gctttccagc agactacatt tacgttgtag
     9361 taactggcgc tcttcgctat cgagccagga ttgatgacag acccagatat ccaggtcaga
     9421 ggaacaactt tgccctacgg acgaggtgct gcccatggtg tatacaccag taattggaag
     9481 ctcacctttc ggtggatcct gtactgacat tccacgatac agttcaagct cgttcaggta
     9541 gtggcgttga gtttcatcag gcgtgtaaag gcaaatgcct ttgggaacgt taccatcaag
     9601 gtaacccggc attagcggat ggtgatagtg caacaatgtc ggcagtagac tgtagacctg
     9661 ttggaatgca ggccccatag cagcaagcgc gcgatccaca cgcaattgat ttatggcatc
     9721 cagtctctgt ttcagagtct caatatagag gtacaagacg tatcgcctga tttgctaccc
     9781 gtcatgactg tgattccgcc aacatcaacg gtaacacgcg gcattcggga tatttcgtat
     9841 gtcaaaggta accgttacca cttttcgcgc ctggtttttt tagtttcacg acgaaaaaat
     9901 ggtctaaaac gtgatcaatt taacaccttg ctgattgacc gtaaagaaag atgcgctaca
     9961 tacaagtgta gcaccgttta ttctctgtaa attccttatt acgacggcgt gaaacgcctg
    10021 tcaggatcca ctgccagacc tcattttacg gtttgcgcag gcgtctacgt ttcaccacaa
    10081 cactgacatc actctggcaa ggatgttagg atggaccacg gatgataatg acggtaacaa
    10141 gcatgttaga caatgtttta agaattgcca cacgccaaag cccacttgca ctctggcagg
    10201 cacactatgt caaagacaag ttgatggcga gccatccggg cctggtcgtt gaactggtac
    10261 cgatggtgac gcgcggcgat gtgattcttg atacgccgct ggcgaaagta ggcggaaaag
    10321 gcttatttgt aaaagagctg gaagtcgcgc tcctcgaaaa tcgcgccgat atcgccgtac
    10381 attcaatgaa agatgtgccg gttgaattcc cgcaaggtct gggactggtc actatttgtg
    10441 agcgtgaaga tcctcgcgat gcctttgtgt ccaataacta tgacagtctg gatgcgttac
    10501 cagcaggcag tatcgtcggg acgtccagtt tacgtcgcca gtgccaactg gctgaacgcc
    10561 gcccggatct gattatccgc tccctgcgcg gcaacgtcgg cactcgcctg agcaaactag
    10621 ataacggcga atacgatgcc atcattcttg ccgtagccgg actaaaacgt ttaggtctgg
    10681 agtcccgcat tcgcgccgcg ttaccacccg agatttctct tccagcggta ggacaaggtg
    10741 cggtcggtat tgaatgccgc cttgatgatg cacgcactcg cgagctgctt gccgcgctga
    10801 atcaccacga aactgcactg cgcgttaccg cagaacgcgc catgaatacc cgtctcgaag
    10861 gcggatgtca ggtgccaatt ggtagctacg ccgagcttat tgatggtgaa atctggctgc
    10921 gtgcgctggt cggcgcgccg gacggttcgc agattattcg cggtgaacgc cgcggtgcgc
    10981 cgcaagatgc cgaacaaatg gggatttcgc tggcagaaga gctactgaat aacggcgcgc
    11041 gcgagatcct cgctgaagtc tataacggag acgccccggc atgagtatcc tggtcacccg
    11101 cccgtctccc gctggagaag agttagtgag ccgtctgcgc acactggggc aggtggcctg
    11161 gcattttccg ctgattgagt tttctccggg tcgacaatta ccgcaacttg ctgatcaact
    11221 ggcggcgctg ggggagagcg atctgttgtt tgccctctcg caacacgcgg ttgcttttgc
    11281 ccaatcacag ctgcatcagc aagatcgtaa atggccccga ctacctgatt atttcgccat
    11341 tggacgcacc accgcactgg cgctacatac cgtaagcgga cagaagattc tctacccgca
    11401 ggatcgggaa atcagcgaag tcttgctaca attacctgaa ttacaaaata ttgcgggcaa
    11461 acgtgcgctg atattacgtg gcaatggcgg tcgtgagcta attggggata ccctgacagc
    11521 gcgcggtgct gaggtcactt tttgtgaatg ttatcaacga tgcgcaatcc attacgatgg
    11581 tgcagaagaa gcgatgcgct ggcaatcccg cgaggtgacg atggtcgttg ttaccagcgg
    11641 tgaaatgttg cagcaactct ggtcgctgat cccacaatgg tatcgtgagc actggttact
    11701 acgctgtcga ctattggtcg tcagtgagcg tttggcgaaa ctcgcccggg aactgggctg
    11761 gcaagacatt aaggtcgccg ataacgctga caacgatgcg cttttacggg cattacaata
    11821 actctcataa caggaagcca taatgacgga acaagaaaaa acctccgccg tggttgaaga
    11881 gaccagggag gccgtggaca ccacgtcaca acctgtcgca acagaaaaaa agagtaagaa
    11941 caataccgca ttgattctca gcgcggtggc tatcgctatt gctctggcgg cgggcgtcgg
    12001 tttgtatggc tggggtaaac aacaggccgt caatcagacc gccaccagcg atgccctggc
    12061 taaccaactg acggcattgc aaaaagccca ggagagccaa aaagccgagc tggaaggcat
    12121 tattaagcaa caagctgcac agcttaagca ggcgaatcgt cagcaagaaa cgctggcaaa
    12181 acagttggat gaagtccaac aaaaggtcgc caccatttcc ggcagcgatg ctaaaacctg
    12241 gctgctggct caggccgatt ttctggtgaa actcgccgga cggaagctgt ggagcgatca
    12301 ggacgtcacg accgctgcag cgttgctgaa aagtgcagat gccagcctgg cggatatgaa
    12361 tgacccgagt ctgattaccg ttcgtcgggc aattaccgat gatatcgcca gcctttctgc
    12421 agtttcgcag gtggattatg acggcatcat ccttaagctt aatcagcttt caaatcaggt
    12481 agataacctg cgtctggccg ataatgacag cgatggttcg ccgatggatt ccgatggtga
    12541 agagctttcc agttccatca gcgaatggcg tatcaatctg caaaaaagct ggcagaactt
    12601 tatggacaac ttcattacga ttcgccgtcg tgatgacacc gccgtaccgc tgttagcgcc
    12661 aaatcaggat atctatctgc gcgaaaatat tcgctctcgc ctgctggtcg cagcacaagc
    12721 tgtaccgcgt caccaggaag agacttatcg ccaggcgctg gagaacgtct ccacctgggt
    12781 acgtgcttac tacgatactg atgatgccac caccaaagcg ttcctcgacg aggtggacca
    12841 gttaagccag caaaatatct cgatggatct tccggaaacc ctgcaaagcc aggcgatgct
    12901 ggaaaaactg atgcagactc gcgtgcgtaa cctgctggca caaccggcag cagggacaac
    12961 ggaagctaaa cctgcacctg cacctgcacc tgcacctgca cctgcacctg caccgcaagg
    13021 tgatactccg gcagccgcgc cgcaaggaga ataaccatgc taaaagtgtt attactcttt
    13081 gttttgctga ttgcggggat agtggttggc ccgatgattg ccggtcatca gggttatgtg
    13141 ctgatccaga ccgacaacta caatatcgaa accagcgtca cgggcctggc gatcatattg
    13201 attctggcga tggtagtgct gtttgccatt gagtggctac tgcggcggat cttccgcact
    13261 ggcgcgcaca cccgtgggtg gtttgtcggg cgtaagcgtc gccgtgcacg taagcagacc
    13321 gaacaggcgc tgctgaaact ggcggaaggc gattatcagc aagttgaaaa gctgatggcg
    13381 aaaaatgccg atcacgctga acaaccggtg gtgaactatc tactggctgc cgaagccgcg
    13441 caacaacgtg gtgatgaagc gcgcgccaac caacatctgg aacgcgcagc ggagctggcc
    13501 ggcaatgaca ccattccggt agaaatcacc cgtgtacgtc tgcaactggc ccgtaatgaa
    13561 aaccatgctg cacgccacgg cgtggataag ctgctggaag ttacgccacg ccatccggaa
    13621 gtattacgtc tggcggaaca ggcgtatatc cgcacaggtg catggagttc tctgctggat
    13681 atcatcccat caatggcgaa agcccatgtt ggtgatgaag aacatcgtgc aatgctggaa
    13741 caacaggcat ggattggcct gatggatcag gcgcgtgccg ataacggtag tgaaggtttg
    13801 cgtaactggt ggaaaaacca aagccggaaa acgcgtcatc aagtagcgtt gcaggtggca
    13861 atggcggaac atcttattga atgtgacgat catgatactg cccagcaaat tatcatcgat
    13921 ggcctgaaac gccagtacga cgatcgccta ctgctgccga ttcctcgact gaaaaccaac
    13981 aatccggaac agctggaaaa agtgctgcgc cagcagatca aaaacgtcgg cgatcgcccg
    14041 ctgttgtgga gcacactggg ccagtcactg atgaagcacg gagaatggca ggaagcatcg
    14101 ctcgccttcc gcgcagcgct gaaacaacgt ccggacgcct acgattacgc atggcttgcc
    14161 gacgcgctgg acagactgca caagccggaa gaagctgcag cgatgcgtcg cgacggtttg
    14221 atgttaacgt tgcagaacaa cccaccacag tagttccttc tcacccggag gcaagcacct
    14281 ccgggacctt tctgatgcat aaaaaaacgc ctgctcttat tacggagcag gcgttaaaac
    14341 aggtctgtat gacaacaagt gggtgcttca ctcaacgttg tgtccatggt gtctgatgag
    14401 gcataagcga catctgtcag tggacgataa gcaccgtaaa cggtgctgcg tcattccgga
    14461 gtttatgagg cactaaggcg aacataagag atggaatgag catctactcg tttattatgc
    14521 cacagagaat cgggaaataa catcccttaa cacttgttat gagataattc tgtaatcctc
    14581 tttgcttcct gagtaataac ttcctgagtg aatatttaac ctgagcttga tcctacacat
    14641 acttattatg aatgataaaa ttcattcaat taataacaca tatattaatt gccgttaaaa
    14701 ctaaaaaaag catcaataat caacgcgata taataaacct gccttacata tcaactgcgc
    14761 cagaggtagg attgaaaacg ctctcctgat tttccaattc attttctgga taaataaata
    14821 atttattttt gtcactatta tttatgtaat catcctgtca gggagaggga tctcaattat
    14881 caatgcttaa ttacgtcatc attttgatga catgaaaccg gagcattttg catggaattt
    14941 tcgttttcac ccaaacttct tgttgttgct gtcgccgccg ctcttcctct catggccagc
    15001 gcagcagata ccccgtcaac tgccaccgca cgcaaaggct ttgccggata cgatcaccca
    15061 aaccagtatc cacagaacgc tgcaatttat tgaatttgca cgatcatgta ggccggataa
    15121 ggcgtttacg ccgcatccgg caatcaaccg caggcggcca caaaatggcc gctattttac
    15181 ttattcacca ccagcaaatg tgcctgcata atgtcactgg ccgggcgacc gtgcgccagc
    15241 aaatcagcca ttgctttaag atatggcggt agatggcgga aataacgctg atacccggca
    15301 cacaaataat tcagccccgg tttgccgctg gcatcgagca tgaagcggtg tttcgggcag
    15361 cctccccagc acgcttttaa cacgttacaa ctgcgacact gcgccggtaa ttgcttaaat
    15421 ttatcttcac caaacacctg ctgttgcggg gaatcgatca tttctgcaat tgtttgctga
    15481 tgcatattcc ccagccgata ttgcggataa acatagtgat cgcaggcgta aacgtcgccg
    15541 ttgtgctcaa caatcaccga gcgcccacag gttggctgat gatggcaaac cgcacccggc
    15601 gcaccgacaa aattggcaaa cgcccattcg atattcatca cgaaaatctt gccgacgtcg
    15661 cgtttgatcc agtggtcaaa aatcgccacc agaaattcac caaattcatc ggggcgcaca
    15721 gaccattccg tcagttcccc ctgaatatca ccaggcgcat gtagtttcag tccatcgctg
    15781 gcagctgttt catcagccag gcgctcgacc accggaataa actggatgaa ttcgactccc
    15841 gcatcgcaca aaaaatcata aacctgcaac ggttgctgcg cgctggtgcg gttgacgcag
    15901 accagcacgt tatagtcgac atgatgtttt tgcagcagcg tcagggcacg catcaccagc
    15961 ttatgcgttg gtctgccacc tttggtcacg cgatattgat tgtggatctc agccggaccg
    16021 tccagcgata acccaacaag aaaatgattt tctgccagaa atgcacacca tttatcatcg
    16081 agcagcacgc cgttagtctg gaagctgtta cttatcttcc tgccagcacc gtatttcgcc
    16141 tgtaacttta cggcacggcg gtaaaaatcc agcccgagta acgttggttc gccgccctgc
    16201 caggtaaaag ccacttcgtt ttgcggttcg ctggcagcga tatagtgacg gacatacgct
    16261 tccagcgtgt catcgtccat atgcgtgact ggcttttcgc ggtaaaggga ttgtttttcg
    16321 agataaaaac agtagtcaca gttcagatta caatcggaac cactcggttt cgccatcaca
    16381 tgaaaagcac gcgttggaac ctgttgcagc atggtcactc cttgcctgaa gtcatccttc
    16441 aatacgttaa gggcgaaatc ataccgtggg gcaatgagtt attacgggcg tttattgcga
    16501 agagagggtg acgaaatgca cagaaaacaa aaaaccccgc cgaagcgggg ttcaaaattg
    16561 gtcggcgaga gaggattcga acctccgacc cactggtccc aaaccagttg cgctaccaag
    16621 ctgcgctact cgccgaaata ctgctttttg aatttttagt tcaattattt aaagtcgtgg
    16681 tgcgaggggg gggacttgaa cccccacgtc cgtaaggaca ctaacacctg aagctagcgc
    16741 gtctaccaat tccgccacct tcgcattgtc acaacttcta ataatggggt ggctaatggg
    16801 attcgaaccc acgacaactg gaatcacaat ccagggctct accaactgag ctatagccac
    16861 cactacaaat cttgttacgc ggtattacta ccaccgcagc tcaagcgccg ggactaaatg
    16921 gcgcgcccga caggattcga acctgagacc tctgcctccg gagggcagcg ctctatccag
    16981 ctgagctacg ggcgcttagc gccgttgcgg gggtggataa tacggacttc ccacccctct
    17041 gtctagtccc tttttaaata aattgcgcgt ttggttacgg tttgtgcgtt ttgctgctta
    17101 ttcctccagt ttatgcgctt tcccgtggcg attaaggcca aaaactttat aaatcgccgt
    17161 caccgccagc ataaagatga tgccaacaaa cagcgacata cgcgtatctt cattaaagta
    17221 catgccgatc aaaacgcaaa tcaggaatgc cattgttacg tagttggccc acgggaacag
    17281 gattgagcgg aacggatggc tggcaatcgc cgctttatgt gcacgccgaa aacgcagctg
    17341 gcttatcaat atcacaaacc atggcaccat ccccggaagc acgctggcac tgtagacgta
    17401 gacaaacaca cgctgcggat tgggaatgat gtagttcagg catgagccaa ttagcagaat
    17461 agcaatagat actgccacac ccgcaactgg tacgccgtga cgggaaactt tcgccatcgc
    17521 cgccggtaac tgacggtttt tcgccagtgc gtagagcata cgtccgcaac tgtacatgcc
    17581 gctgttacag ccagagagcg cagccgtcag caccacaaag ttgataatgc ccgccgctgc
    17641 ggtaataccg attttggcaa aagtcagtac gaacgggctg ccgttgctgc cactttcatt
    17701 ccacgggaag atggtgacga taacgaaaat cgcgcctacg tagaaaatca ggatccgcca
    17761 cagcactttg cctacggcac tgcgcaacgt cacctgcgga ttcttcgctt caccggcagt
    17821 aatgccaatc agctccacgc cctggtagga cgccaccaca atacacagcg cggtcaggaa
    17881 ccctttccag ccacccgcaa agaaaccgcc atgctctgtg agattgctaa aaccaatcga
    17941 ctgcccgcca ttgccaaagc caaagaaaat cacgcccagg ccaatgacaa tcatcacgat
    18001 aatcgtggtg actttgatca tcgcgaacca gaactcgatt tcgccgtaca accgcaccgc
    18061 cgccagattc gccaacgcca ccagcgccac tgcgatcaat gcgggtatcc actgcgccat
    18121 ctccgggaac cagaactgga cataaacgcc aacggcggtg atttctgaga tccccaccgc
    18181 catccacata aaccaataag accaggcggt gagataacca aagaacgggc tcatataacg
    18241 atgcgcataa acggcgaacg aaccggtaac cggttcgagg aacaacattt cgcccattga
    18301 acgcatgatg aaaaagacga atagcccggc gatgatatag gccaacaata cggatggccc
    18361 ggcccatttc aaggtactgg cggcccccat aaacaggccg acgccaatgg tgccccccag
    18421 ggcgatgagt tcgatatgtc gagcttccag cccacgctgt agctctggtt tgttatctgc
    18481 cataaatcct cgtgttgtgt ttgcatgctt tccggtgtta ccggttatcg ttatgggtac
    18541 atcgagtgtt gcgaatgttt tcgtaattca ggagaaatgg caaataaagc attaaaaatt
    18601 tgaatgcttt gtgtaataaa aaagcagaca ggcgacggag tgaccactcc gtcgctttac
    18661 aaagagagga aaatcagagg ttgccggtgt agtgccagcg taaataacgc agcaaacgaa
    18721 gctgacgctt aatgcggctc ggctgcgaaa gcaggcggta gagccactcc agtcccagcg
    18781 tttgccagat tttcggtgcg cgttttacgt gaccggtgaa aacatcgtaa gtcccgccaa
    18841 cgcccatata cagcgcatct ggatgcacca gacggcagtc gcgcatgaag atctcctgct
    18901 ttggcgatcc catcgcaacg gtgacgattt gcgctccgct ggcatgaatg cgttcaaaca
    18961 gcgcctgacg ctgctcgggt ttaaaataac catcctgact gccaacgata ttcacattcc
    19021 actggttgcg cagtttagct tcagtttgcg ccagcacttc aggtttaccg cccacaagaa
    19081 ataccggcgt cccttctttg cctgcgcgcg ccatcagctc ttcccagaga tcggcaccgg
    19141 caacgcggga aacctgcgcc tgcgggtact ttttacgtac tgaacgtaca acgctgatgc
    19201 catccgcata tttaaattcg gcagcgttaa ttaactccct gacctcggcg ttatcttcaa
    19261 tggtcagcat tttttcagca ttaatggcaa ccagcgttcc ctgcttaagc tgcccgtcag
    19321 caaacagata atcgagggcg tgctgcatat cacgccaacc aatcaactgt aagccacgca
    19381 gcgtataggt cggtgccgtg gtgttgttat tcattgttat ccttcaacct gcgtccggag
    19441 cgatgatttt gtacgtttat gaatgagtcc ggcgctttca aaaagccagt acaacagttt
    19501 tgcgatcatc agacatgcgc cgaagaccac gataaaaaag actacgcgtg agacaaacga
    19561 atccagccct tcacgtgcca gcacgatcat attgaagatc gccccaaagc agaaactgtg
    19621 caatatcgca gccttatagc gattaggctc gcggttgccc agctcataca gccagtcgaa
    19681 ccatttgatg atcagaccaa ccacgatcgc cccgagcggg atgaacaacg cgccgcccat
    19741 caccaccagt gagcctataa gcgtaggcga gatcgccagt ccggagtggt tattcagcac
    19801 ttccctggta aagtagttgg ctgagttcag caccatactc gggcgacccg gccacagcca
    19861 ggaagggata aagacataga aatcgcggac aattggagcc aggccctgga agtcgatgtt
    19921 gtcgtagttc tgcaacagca acgccagatt ctcccacggc gagaaggtgt cgcgagtgag
    19981 atagagaaac gtatagaacg cttcatcgcc gctcacattc attccatagc gttttagcgc
    20041 cagccagaac atgcccacaa tccccagcac gcccgccgcc gccagcatcc acaacgaaat
    20101 ccagccgcga ataatgccaa taaacaggaa gatagcgaat gcgatgatga tattggcgcg
    20161 agtgccgccg acaatcatat aagtcagcaa gccaaaggcg accgtgctga cgaggaaaaa
    20221 cagccacgct ttgctatcct ggcgcagaaa gtagaccacc agcatcgccg ggatgaaaaa
    20281 gtaaaagaag cgttttaacg ccacgccgga gacttcactg gagaagatct gactgtagga
    20341 gttaagccgg aacagcaaaa agccgttgtg catgaagaag atgccgacgc ttaccagcgc
    20401 gatgcccatc aggatcaccc acgtaagatt ggtctccacg cggttcatgg taaacagcgg
    20461 acggcgcggt acatcagcaa cgcgtttgcg taggcgggtt ttgtaggtga catagtaaac
    20521 cgcgtagaag cagcccgcag aaagcaacgc ctgcaacaag atttctggcg gcgcgacacc
    20581 aacatcaaag cgaaatacca gcacgctggt cagcgggaag ccgaagaaaa aggtgagcaa
    20641 aaacagcaat gaaaagaaga cattgaagtt aaagcgcaca cggcgaaact caaaccaagt
    20701 cagcgtggca ataaacagcg tgcagagcag ccagaccaca aacaggccac tgaattgcag
    20761 cagactcatg cgacctcccc ggcggcaatc gccaacaccc gctgccagcc ttgtagatag
    20821 ttagggctaa agaaggcaat ggtgttttta tccaccgacg ccaactggcg ctgcgcttca
    20881 cgcacaatat cctcgttgag atcgtcggta gtaaacagca ccggcaaatg ctgttccgtc
    20941 atatcctgcc agaacggatt ttcccggtta agcacacaag gaatgcccgc ctgaatcagt
    21001 aagcaaagcg taccaatgcc ctgctggcgg gcaaaaataa agtaaccaag atcgcactga
    21061 cgaagtagcg ccagataggc gtcaaattcc agtttttcgc tcaaaatttg cagattttct
    21121 tcgctgaata actccagccc cgcctgacga acttcctcaa tgtacgcttc gttattaggc
    21181 ggatatccca tcggcaccac cacttttacc gtatcgccaa attgctgatg aacggcgcgc
    21241 aaggcagcaa tatggtcatt gctgcggtca ccggagttcc ccaccagaat ggtcattttc
    21301 ccttcacgtt gccgatcgtt cgccatcgta ttgagagaag ggtccatccg cgtcgggaag
    21361 tacagcagtt cgccccgcac ctttggatgc gttttggcaa aaaagctcaa atcaccgcgg
    21421 gtggcaaata cacagccgac tcgcttttgc gccaggcgac gtagcgggta aaaaagctta
    21481 tatctcaagc cactggaaag ctcatacagg tctgcccccc agatatgcca gaaaaactgg
    21541 ctgggcttaa tgccaccact cagcagagcc agccacagtg tgggattgaa ctgaccgtgg
    21601 aaaaaaaatc gctgctgacg gttagctttt gctttcgcga tgaccgcttc cgccagcgat
    21661 tttttcccag ggaaaaattg cacagaaagc gccggacagc tatcacttaa gccgtcgtcc
    21721 ttgccaacaa ccataaactc gcgcgcgtgc tcgctcgtcg cggccagcgc gtcattgaaa
    21781 aaccgcaaaa cggttcggtt atggtgaggg atatccgatc ccagtacgtg aatcagtaca
    21841 gtcatgcccg cctacgccag agtaaaaaca cgccacaaca aagagaaaaa tagacgatat
    21901 aagttgccat atatgcctgc gccgcgccca gtgcaccatg cgcagggatt agccagtggg
    21961 caaataccat caataaagtg aactggctga cttccgccag aatataaaac cgcagtgacg
    22021 ctttggcgat caccagataa ccaaagacat aagcgcccac ttttagcaca tcacccacta
    22081 actgccaggc aaagagatcg cgcatagcgg taaatttatt cgacaacagc aaccagatag
    22141 caaaatcacg cagcaaccag acggtaaaac tcgccgccgc cactgccggt aagacgaatt
    22201 ttagcgattt aaccacttcc cgggtgatat cgcgcttttc cgttagccgc gacaacgtgg
    22261 gcagcaaata tacgctgaac gatgccgtaa tgaattgcag gtaggcatcg gaaatactgc
    22321 tcaccccttg ccagatcccc acttcatccc agctatactg cgccgccagc agtttacgca
    22381 tcatgatgta agcaacaggc aaggtcaccg acgtaatcaa cgccatgagc gtaaatttgc
    22441 tcaactgccc tgccagaccg ttatcccagc tgggtttcag atagcttaac gggatgacac
    22501 cacgtttgat caacatgatg gcggcaggaa ttaccaccag cgcgggaatc agcgccagac
    22561 ccagcaacgc cccttcataa ccgcccaaac ggtaactgac gtagtacgcg agaacgccaa
    22621 tcaagctgcc gacaatcagc gataacgcat tacctgcggc atcgcgaaag cctttcatca
    22681 gcgccagtaa caggttgccc caggcgatcc ccatttgcac cagcgccact aaacgcacca
    22741 gcccctgata gtcggtatta ccaaacaatc cctggctgat tggcgcagct gccagcacaa
    22801 aaaccagcgc catcagcgta gagaaaccaa gtaccatcgc tgatgaagtg ccgaccacgc
    22861 ggcgcagctg ttgcggatta tcatggtact gggcaacgta tttggttaca ccgttaaaga
    22921 tgccagcccc ggcaagcacg ccgagcacgg taatcaactg gcggaaattt gccgccagcc
    22981 caagccccgc cggaccaaat gacaccgcca gcaacttacc gaccagtaac ccggcaccaa
    23041 tcttgaccag tgtactggcc gccgtccaca aggacgcttt tgccaacgac atatcaggag
    23101 aagtagttca acaaagtcgc aattaccgta cgctgattga cgggcgacag gttgtagaac
    23161 agcggcaggc gcagcaggcg ctcgctctct ttggtggtgt agcgatcttc accgtggaac
    23221 tcaccaaagt gttcccccgc agggcaaccg tgcagcggaa tgtaatgaaa caccgccatg
    23281 atttccgctt ctttcagaaa gttaatcaac gcgctccggt catcaatatc ccgcagttta
    23341 atgtagaaca tatgcgcgtt ctgcacgcag ccatcaggaa tcgacggcag ctcgatacgc
    23401 ccggctttcg ccagaggcgc taacgcatcg tagtaatttt gccacagcgc cagacgttgc
    23461 tggttgatac gatccgctgc ttccagttgc gcccacaggt atgcagcttg cagatcggac
    23521 atcaaatagc tggagccaat atcgcgccag gtatatttat cgacctgacc acggaagaac
    23581 tggctgcggt tagtgccctt ttcacggatg atctcggctc gttcgattaa cgctttatcg
    23641 ttaatcagcg tcgcgccgcc ttcaccaccc gccgtgtagt ttttggtttc atggaagcta
    23701 aagcagccaa tatgaccaat ggttcccagt gcacgccctt tgtaagtgga catcacgccc
    23761 tgagcggcat cttccaccac aaacaaatta tgctttttcg ccaacgccat aatggtgtcc
    23821 atttcgcagg ccacacccgc gtaatggacc ggcacgataa cgcgcgtttt gtcggtgatc
    23881 gctgcttcaa tcaacgtttc gtcgatgttc atggtgtccg ggcgaacatc cacaaagacg
    23941 attttcgcgc cacgcagcac aaaggcattg gcggtggaga caaaggtgta gctcggcatg
    24001 atcacttcat cgccaggctg gatatcgagc agcagcgccg ccatctccag cgaagcggtg
    24061 caggacggcg tcagtaacac tttggcgctg ccaaaacgtt gctccagcca ctgctggcag
    24121 cgacgggtaa aaccgccatc gccacacagt ttgccgctac ccattgccga ctgcatatag
    24181 tcgagttcgg ttcccaccac cggcggtgcg ttaaatggaa tcatgtgatc acctgtataa
    24241 ccagtacgcg gtgctttcta cattcgcacc actttgtatg tatcgtttaa gcgcggcggt
    24301 gttgcccatt tgggtcgcca cccgcaaagt tgttttaccg cgagcatacg cccagtttag
    24361 cgccgtttgc atcagctcag cacctgcacc gcgtccagcc agcaggccaa ttcgcgcatc
    24421 tgtcgcattg agttcccgta aagagacata gccgcgaata tcgccggacg ccgcacgtag
    24481 aatcagacat tgatgatcaa aggtgccgcg cacggcattt tcaatccact gtgcataaaa
    24541 gcgaccgctg gcgtcaggcg cataccacgg cgcacgaaaa cggctttgcg caaatgcggc
    24601 gctagctaac tgacgtaatg cgggaatatc ggtctcttgt gccacgacag caccgctatc
    24661 actgacattg ttcacgggta gcgccaaatc aacttcacct tctaccaggg agaatcccag
    24721 ctgttgcagg gcatccagtt cacccgtatt tgatgccgca attttggcct gcacccgtga
    24781 ccacggcgct aacgcgtctg gcgtcaggag cggtgcttca gacgtaatgc gcacgatggc
    24841 gctgttaaca ccaaagaagg cgttttccca ggttagtggc tcaatactgg cgcggacggg
    24901 cacgaagtaa ctccagcaga tattggccgt agccagtttt cgctaatgaa ctggcagcac
    24961 gcttcacacc ctcgtcatcg agccagccgt tacgccaggc gatctcttcc aggcaggcaa
    25021 tcttaaagcc ctggcgtttt tctactgtct gcacaaaggt actggcttca atcaggctgt
    25081 cgtgagtgcc agtgtccagc caggcaaatc cgcgcccgag cagttcaacg gtcaggttgc
    25141 ccgcctcgag gtacatctgg ttgatggagg taatctccag ttcaccacgc tccgacggct
    25201 tcacctgctt tgcgtactcc acgactttac tgtcgtagaa ataaagcccg gtcaccgccc
    25261 agtttgactt cggctgtttt ggcttttctt ccagcgagat agcgcggaaa ttgtcgtcaa
    25321 actccaccac gccaaagcgt tcctggtcca tcacctgata gccaaatacc gtcgcccctt
    25381 ccgtgcgcgc cgcaacatga cgcagcttcg gactgaagcc ctgaccgaag aagatgttat
    25441 cgcccagcac cagacaagaa ggttcaccgt tgaggaaggt ttcaccgatg ataaaggcct
    25501 gcaccagacc gtccgggctg ggctgttcgg cgtattccag ctggataccg aactcactac
    25561 catcgcccag caggcgctgg aaataacctt tatcttccgg cgtagtgatg atgagaattt
    25621 cgcggatacc ggccaacatc agcaccgaca gcggatagta aatcattggc ttatcgtaaa
    25681 tcggcaacag ttgcttcgat acgccgcgcg taatcggatg caatcgggtg ccggaaccgc
    25741 ccgccaggat aatacctttc atgtttgcct ccgctgaaaa ttagcctttc agacctaaac
    25801 gctcgccctg atagctgccg tcctgcacct gcttccacca gctttcatta gccagatacc
    25861 actgcaccgt tttacgcatt ccactttcaa aggtttcctg tggcagccag ccaagttcac
    25921 gggcaatttt cgaagcatca atggcataac gcagatcatg ccccggacgg tcagcgacaa
    25981 aggtgatcaa gtcacgatag tgcaccacgc cgtgcggctt gttcggagcc agttcttcca
    26041 gcagctcgca aatggtttcc acaacatcga gattcttacg ctcgttgtga ccaccaatat
    26101 tataggtttc accgactttc ccggtggtcg ccacgcaata cagcgcgcgg gcgtgatctt
    26161 ccacatacag ccagtcacgg atttgctgcc cgttgccata taccggcagc ggtttacccg
    26221 ccagcgcgtt gaggatcatc agcgggatca gtttttccgg aaagtggtaa ggaccgtagt
    26281 tattcgagca gttggtgata agcgtcggca gaccgtaggt ccgcagccag gcgcgcacca
    26341 gatggtcgct gctggctttt gacgcggaat aagggctgct cggcgcatac ggcgtggttt
    26401 cggtgaagaa atcatccgtc gagtgcaggt caccatatac ttcgtcggtg gagatatgat
    26461 gaaaacggaa cgctgatttt ttatcttccg tcagcgtatt ccagtaagcc cgcgccgctt
    26521 caagcaatgt ataagtcccg acaatgttgg tttcaataaa cgctgccggg ccgtcaatag
    26581 aacggtcaac atggctttcg gctgccagat gcatgacaca gtctggctga tgctcagtga
    26641 atacgcgtgc cagttctgcc cgatcgcaga tatcaacttt ctcaaaggca aagcgatcgc
    26701 tttgcgcgac cggtgccagc gacatcaggt ttccggcgta gatcagctta tcgaccacta
    26761 ccaccgcgtc gctcgtttcg ttgatgatat aacgcaccag cgccgagcca ataaacccgg
    26821 caccacctgt tatcagaatt tttctcatca gcgccagact cctttggcat cgacgacata
    26881 ctgctgatgg acattgtcgc cattgataac tttaaactga ctatgatcga ccagcatcac
    26941 cagcacgtct gccgttgcca gcgcctcgtc aagctgcgcc agagtacaaa gcccggtcag
    27001 ttttttcggc aactggtgga tgttaggctc aacaaccaga gtttcgccgc tatgccactg
    27061 ggcgatcagt tcagcgattt ccatcgccgg gctttcgcgc aggtcatcaa tattcggttt
    27121 aaacgccaga ccaaagcagg cgattttcag ttcactggcg cgtttatcgg tagccgccag
    27181 gcaatcagcc accgccgctt tcacctgatc gataacccag aacggtttgt gatcgttcac
    27241 ttcgcgcgcg gtacggataa gccgcgcctg ctgggggttc tgtgccacga taaaccacgg
    27301 atcaacagca atgcagtgac cgcccacgcc agggccaggc tgaagaatat taacgcgagg
    27361 gtgacgattc gccaggcgaa tcagttccca gacgttaatc ccctgatcgg cacaaatcag
    27421 cgacaattca ttagcaaaag cgatattcac atcgcggaag ctgttttcgg tgagcttaca
    27481 catttccgcc gtccgcgagt tagtgacgac acactcacct tcgaggaaaa ttttgtacag
    27541 ttcgctggcg cgggtcgaac aaaccggcgt cataccacca atcacgcgat cgtttttaat
    27601 cagctcgacc ataacctggc ccggtaacac gcgttccggg cagtaagcaa tgttgacgtc
    27661 cgcctgctcg cccacctgct gtgggaaagt gagatccgga cgcatctctg ctaaccattc
    27721 tgccatcttc tcggttgacc ccaccggcga ggtggattca aggatcacca gcgcgccttt
    27781 tttcagcact ggcgcaatgg agcgagcagc cgattcaacg taggtcatat ctggctcatg
    27841 atcgccttta aacggcgtgg gtacagcaat cagccaggca tccgcttcaa ctggcgtcgt
    27901 gctcgctcgt aaaaaaccgc cttctacggc agtttttact acgctcgcca aatcaggctc
    27961 gacgatatgg atttcgccac gattgatggt atcaaccgcg tgttggttga tatcgacacc
    28021 aatcacctgt ttttgccgtg aggcaaacgc tgctgctgta ggcagcccga tgtaacccag
    28081 tccgataaca gaaatggtcg caaaactcat agtgatatcc gattattttt taacgcttcc
    28141 agaatgcgag agcatgcctg accatcacca tacgggttat gggcgcggct catagtttga
    28201 tattcgtttt cgtcttttaa aagacgcgtc acttcctcga caattcgctg cttatccgtg
    28261 cctaccagac gcaccgtacc cgccgtcacc gcttccggac gctcagtggt atcgcgcatc
    28321 accagcaccg gtttccccag cgaaggcgct tcttcctgaa tgccgcctga gtcggtcaaa
    28381 atcagccagg cgtggttcat caaccagaca aacggtaaat actcctgggg atcgatcaga
    28441 atgacatttt tcacatgccc cagaatgcga ttgaccggct ctctgacgtt cgggttgaga
    28501 tgcaccggat agacaatctg gatgtcctgg tgcgtggtgg caatgtctgc caacgcgtgg
    28561 cagatttctt caaaaccacg accgaaactc tcacgcctgt gaccggtcac cagaatcatc
    28621 tttttattgg ggtcgataaa cgggtaattt gccaccagtt ctgaacgcag cgtgtcgctg
    28681 ctcatcacct gatcacgcac ccataacagt gcatcaatga ctgtattacc agtaatgaag
    28741 attcggctat ccgcaacgtt ttcacgcagc aagttttgcc gggaagtttc ggttggagag
    28801 aagtgataca tcgccagatg cccggtcaat gtacggttag cctcttccgg ccacggcgaa
    28861 tagagatcgc ccgtgcgtaa accagcctca acgtgaccaa caggaatacg ctgataaaac
    28921 gccgccaggc tggttgccag cgtcgttgtt gtgtcgccgt gaaccagcac gacgtctggt
    28981 ttgaactcgg caagaatagg ttttagccct tccagaatcc gacaggttat ctctgtcagg
    29041 ccctgtcctg gctgcattat gttgagatcg tagtcaggta caatggaaaa gagtttcagc
    29101 acctgatcga gcatctcccg atgctgcgca gtgacgcaaa ctttagcctc aaaaaaagga
    29161 gcttttgcca acgcatgcac caacggagcc atcttgatgg cttccgggcg cgtaccaaat
    29221 acagtcagta ctttcacatc gattctcttc gaataagcgg cgagcgcctt tgcgctcgcc
    29281 gcagcagtgt tgctatttcg agcaacggcg ggttaatgcg acaccagccc cgatcagccc
    29341 cccgacaatg ccccacataa tcatcaggaa ggcacgacgt gggctatcgc gttttaccgg
    29401 ttcttccggc gtacgcaaat agcgataggt ctgaaaacgc ggatccaggg ttggaccaac
    29461 attcagggtg tttaacatgg cccgattctg atcatagtcg agatcaaagg ccggaccgac
    29521 ggcctgtaaa ttttccagtc gagcctggag cattggacgc ccaagcagga acatttctga
    29581 atcaggtaat tcctcggcag gcacatctgt cgcactgcgc gaaatattat gctgctcagc
    29641 aattttcagc gcctgctcaa tgctgttcat ccggcggtcg tagatggctt tcgccacctc
    29701 ttcctgacgc ttcacctgag ctttcatctg gatggtgcgt gccgcccatg cgcctttcag
    29761 ctcatcattc agatggctgg ctgcacgctg gctggcaaaa gcaacatact gacgtaacag
    29821 gttattagcg tcaggcgcgg tttcggcaat aagcttcacg ctgtcattga ccgcgcgggt
    29881 aaagtctccg gggataaact ggatgttgtt aatcatttca tccagcaacg ccgcatcggc
    29941 tttgctgttg cccaccatcc gctgtttgta atagtcggtt tgcagccaga actctctgcg
    30001 ggtatcccac gaggccagtt gcataacaaa ctctttatag gcttcgtcca tgaccgatgg
    30061 ttgatcggca gaagccatgt ttgaacggac atccaggtta cgcaaaaatt gctgctgcga
    30121 gtaatatccc cccagcatat tcaccgttgg acgatcggta atcgccgtcg agctccactc
    30181 ctgacgagca aaaaaagtat acgccagcgc gattaacgca aacgccagcc ccatgccaat
    30241 aatccatagc ttcccagccc acaaggtacg aaacaaccca cgaatatcca gttcattttc
    30301 agcgtcttcg gccggtttcc caggcattgg ttgtgtcatc acatcctcat ttatttggtt
    30361 aaattggggc tgccaccacg atttctacgc agtctgcgtt ttacgcgctt aataaagcga
    30421 gcaactttcc aggcacgctt aatgcaatat ccatagagga agaatgctag caaaaagagc
    30481 accagcatga cccactccgg gacaaaatga gaatattctg ccagcacgcc aatggaagcg
    30541 agcagtgctg cggcaagggt aatcagcaca aacgcctgac gggaagtaaa cccggcacgc
    30601 atgatcaaat ggtgaatatg ctgacggtca ggagagaatg ggctcatgcc tttacgcagg
    30661 cgacggtaca taatcgccac catatccatt agcggaatgg cgattatcca caaagcggta
    30721 accgggctga tgggatgggt tttgccctgg gtcgtttcga gcaggatcca gataacggta
    30781 aaaccaatca gcgtactgcc cgcatcaccc ataaagactt tgtagcggcg acccaggata
    30841 ccaaggttaa gcatgatgta tggcaggatg gcggcgatca tcgcaaagca ccagattgcg
    30901 aggctggttt gcccgtcgaa ccacaaaatc ataccgattg ctgcaaacga gacgcaggac
    30961 aacccgccca gcaagccatc aatgccatca accatgttga acgcattaat ggccgcccag
    31021 acggcaaata gcgtcaggaa gtaaccaaac ggtccgagcg ccatctccca ggagccaaag
    31081 atataaccca ggctactgag ataaagtttg ccgaacacca tcataacaat gccaacagcg
    31141 gcctgtatgg tggcacggat ttttacgctg atatcaaaac ggtcatccag cgcgccaatg
    31201 aaaacaagca caccggcaca agcgagatag agagatgcat gcggaatata gtaatcgaca
    31261 attccgaacg tgaagcaaat ccctgcgtaa accgaaatcc ccccaacgag aggtatcaat
    31321 ccctggtgac gtttgcggaa gtttggttta tccactaaac cgactttttt tgccacctta
    31381 cgggcaaaaa acagaaacag tgtcgtgaat aaaaaaatac tgatgagatc agtactcact
    31441 gtcagtaaat tcacaatgca tgctctcaga gaaaattatt agcagaagta taaccacgaa
    31501 gacctttatt cagaagggaa agtccgttcc gaacccacca gtcctgtgca aaaattaacc
    31561 atttgatatg caaattgcat aacatgccag caaattccag gaattttcct aacatcgcca
    31621 gcgcggcatt aagattacag atataaaagc aaaacgccac gtaaacacgt ggcgtttttg
    31681 gcataagaca aatttatgag cgtttcatca tttcgaagaa atcgtcattg gtcttggtca
    31741 tggccagttt attaatgagg aattccattg catcgatttc gcccatcggg tgaatgattt
    31801 tgcgcaggat ccacattttc tgcagttctt cctgagtcgt gagcagctct tctttacggg
    31861 taccggaacg gttgtagtcg atagccggga agacgcgttt ttcagcgatc ttacgagaga
    31921 ggtgcagttc catgttgcct gtacctttaa actcttcgta aataacttcg tccattttag
    31981 aaccggtatc gataagcgcc gtcgcgataa tggtcaggct gccgccctct tccacgttac
    32041 gcgccgcacc gaagaagcgt ttcggacgat gaagggcatt ggcgtccaca ccaccggtca
    32101 acactttacc tgacgccgga acaacagtgt tgtaagcgcg cgccagacga gtgatggagt
    32161 cgagcagaat gataacgtct ttcttgtgct caaccaggcg tttggccttc tcgatcacca
    32221 tttccgcaac ctgaacgtgg cgagatgcgg gttcgtcaaa ggtagaagca acaacttcac
    32281 cttttaccag acgctgcatc tcggttactt cttccggacg ttcgtcgatc agcagaacca
    32341 tcagcacaca atccgggtgg ttgtaagcaa tgctctgagc aatgttctgc agcagcatag
    32401 ttttaccggc tttcggcggt gccacaatca gaccacgctg accacgaccg ataggtgatg
    32461 ccagatccag tacgcgagcg gttaaatctt ccgtagaacc gttaccacgt tccatacgca
    32521 gacgagagtt tgcgtgcagc ggggttaagt tctcaaagag gattttgttg cgggcgtttt
    32581 caggtttgtc gaagttaact tcgttaactt tcagcagcgc aaaatagcgt tcaccttctt
    32641 tcggcgggcg aatcttacca gagatggtat caccagtgcg gaggttgaaa cggcggattt
    32701 ggctagggga aacgtagatg tcatcaggac cggcgaggta ggagctgtct gcggaacgga
    32761 ggaaaccaaa tccatcctgc aatatctcca gtacgccatc accaaagata tcttcgccac
    32821 tctttgcgtg ctgcttcagg atggcaaaaa taatgtcctg cttacgcata cgagccaggt
    32881 tttccagccc catattttcg ccgagagtga tcagctcaga aaccggcgta ttctttaatt
    32941 cggtaagatt catagtggtg tgagttctta aacttggggt aaatctcgaa cttaatgttg
    33001 tgaatggtat ggcaggatca tccatgcctg tttacggtca tcgactcatg tcttttcgct
    33061 gcctggtcac aggagagtac gcagaactga aacgacaaga cggattgagt gacgagccag
    33121 aaatctgttc acttcgcatt taagataaaa cgggaagcgt tggaaattac aagattcaaa
    33181 cttaataagg tatgtttaat acgaagtcaa cactaagtta gcatgactca cgccgggcgt
    33241 ccagttttta acgacggggc acccgaacat gaaattccct tacgccaggt tagcgtcgag
    33301 gaactctttc aactgacctt tagacagtgc acccactttg gttgccgcca cttcaccgtt
    33361 tttgaacagc agcagagtcg ggataccacg gatgccatat ttcggcgcag tgccagggtt
    33421 ttgatcgatg ttcagttttg caacggtcag tttgccctga tattcgtcag cgatttcatc
    33481 cagaatcggg gcgatcattt tgcacggacc gcaccactct gcccagaaat cgacgaggat
    33541 cgccccgtcc gctttgagta catccgtgtc aaaactgtcg tcagtcaggt gaataatttt
    33601 atcgctcata tataactcca caggaataag cctggcgtgt tggtttcgtt gttggtgtaa
    33661 cattaaccaa ctaaaggttg actttatttc accggatacg ctttcgtaaa gcaatagtaa
    33721 gctgatattc taccacacta tgagcaaaac acatttaaca gaacagaagt tttccgactt
    33781 cgccctgcat ccgaaggttg tagaagtcct tgaaaaaaaa gggtttcata actgtacgcc
    33841 cattcaggca ctggcccttc cgctgacgct ggcgggtcgt gacgtagccg ggcaggcgca
    33901 aaccggtacc gggaaaacga tggcgtttct tacgtcaacg tttcattatc ttctctctca
    33961 tcctgcgatt gccgatcgca aggtgaatca accacgtgcc ttaattatgg caccgacgcg
    34021 tgaacttgcc gtgcagatcc atgccgacgc agaaccgctg gcggaagcta ccggcctgaa
    34081 gctgggtctg gcttacggtg gtgatggcta cgacaaacag ctgaaagtgc tggaaagcgg
    34141 cgttgacatt ctgattggca ctacggggcg tttaattgac tacgccaagc agaaccacat
    34201 taacctcggt gccattcagg tggtggtact ggacgaagcc gatcgcatgt acgatctggg
    34261 ctttattaaa gatatccgct ggctgttccg ccgtatgccg cctgcaaacc agcgcctcaa
    34321 catgctgttc tccgccacgc tttcgtaccg ggtacgtgaa ctggcgttcg agcagatgaa
    34381 caatgccgaa tatattgaag tggaaccgga acagaaaacg ggccaccgta ttaaagaaga
    34441 gcttttctac ccttctaacg aagaaaaaat gcgtttgctg caaacgctga tcgaagaaga
    34501 gtggccagac agagcgatta ttttcgccaa taccaaacac cgttgtgaag agatctgggg
    34561 ccacctggcg gcagatggtc atcgtgtcgg tttgttgaca ggcgatgtcg cgcagaaaaa
    34621 acgtctgcgt attcttgatg aatttacccg tggcgatctg gatattctgg ttgccaccga
    34681 cgttgccgcg cgtggtttgc atattccggc agtgacgcac gtctttaact acgatttacc
    34741 cgatgactgt gaagattacg ttcaccgtat tggtcgtaca ggtcgcgcag gcgcaagcgg
    34801 tcactctatc agcctggcgt gtgaagagta tgcattgaat ttgcctgcta ttgagaccta
    34861 tattggtcac tcaattccgg taagcaaata caatccggac gcattgatga ccgatctgcc
    34921 aaaaccgctg cgcctcacgc gcccacgtac aggcaatggt ccgcgtcgta ctggcgctcc
    34981 gcgtaatcgt cgtcgttcag gttaaataaa atgtcatact caaaatcatt caaactgtat
    35041 caagatggca agagaatgaa tcccgatgag catactgtag taagtgattc aggtgaaaga
    35101 atgcagccaa cacagagaca gattgaagga tgaagagtat gggttccacc tcgtcgctgt
    35161 atgcagccat tgatctcggt tcgaatagtt ttcatatgct ggttgtgcgc gaggtggctg
    35221 gaagcatcca gacgctgacg cgaataaaac gcaaagtgcg tctggctgct ggcctgaata
    35281 gcgaaaatgc cctgtctaat gaagcaatgg agcgcggttg gcaatgtctg cgcctgtttg
    35341 ctgaacgtct gcaagatatc cctccctcgc aaattcgcgt tgtcgctacg gcgacattac
    35401 gtcttgccgt caatgcgggt gattttattg ccaaagcgca ggaaatcctc ggttgtccgg
    35461 tacaggtgat cagcggtgaa gaggaagcac gtctgattta tcagggcgtt gctcacacaa
    35521 ctggcggtgc cgatcagcgc ctggtggtgg atataggcgg tgccagtact gaactggtaa
    35581 ccggcacggg tgcacaaacc acctcgttgt tcagcctgtc gatgggctgc gtcacctggc
    35641 tggaacgcta ttttgccgat cgtaatctgg ggcaggaaaa ttttgatgct gcagaaaaag
    35701 cggcacgcga agtgttacgt ccggttgccg atgaattacg gtatcacggc tggaaagtgt
    35761 gcgttggtgc ttccggcacc gtgcaggcgt tacaggaaat catgatggca caggggatgg
    35821 atgaacgcat taccctggaa aagttgcagc aattgaaaca gcgagccatt cattgcggtc
    35881 ggctggagga actggagatt gacgggctga cgctggaacg tgcgttagtg ttcccgagtg
    35941 gtctggcgat cctgatcgcc atttttaccg aactgaatat tcagtgtatg accctggcgg
    36001 gcggtgcgct gcgtgaaggc ctggtctacg gcatgttgca tctggccgtc gagcaggata
    36061 ttcgcagccg tacgctgcgt aatattcagc gccgctttat gatcgatatt gatcaggcgc
    36121 agcgcgtagc caaagttgcg gctaacttct tcgatcaggt ggaaaaggaa tggcatcttg
    36181 aagcaataag ccgcgatttg ctcatcagcg cctgtcagct tcatgaaatc ggcctgagcg
    36241 ttgactttaa acaagcgccg caacacgctg cttatctggt gcgtaatctg gatcttcccg
    36301 gttttacccc cgcacagaaa aaattgctgg cgacgctact gctcaaccag actaatccgg
    36361 tcgatctctc atcgctgcat cagcaaaatg ccgtaccgcc gcgcgtcgca gaacaactct
    36421 gccgtttact ccgcctggcc atcatttttg ccagccgtcg ccgtgacgat ctcgtgccag
    36481 agatgacatt acaggctaac catgaactgt tgaccttgac gcttccgcaa ggttggctaa
    36541 cccaacatcc gctgggtaaa gagattattg ctcaggaaag ccagtggcag agctatgtcc
    36601 actggccgct ggaagtgcat taatgagtaa gtgccggatg cgatgctgac gcatcttttc
    36661 cggccttgat tatttccctc gttttgccgc catcatcgct ttcagattcg ccagatggct
    36721 ttgccctttc tgcatccgtt cttcggcgct gaccactttg cgctcctgtt cccaaatcag
    36781 atcatcctgc ggcagctcca gcaaaaagcg gctcggctcc gggcgcacca gctcgccgta
    36841 ctgacggcgt tctttacaca gcgtaaaggt caattccttc tgggcgcggg taatgccgac
    36901 ataggccagc cgccgctcct catcgatatt atcttcatcg atgctgctct ggtgcggcaa
    36961 aaacccttct tccataccga ccatgtagac ataaggaaac tccagccctt ttgacgcgtg
    37021 cagagtcatc agttgcacct gatccagctc ttcttcactc tcaccacgct ccatcatgtc
    37081 gcgcaaagta aagcgcgtca ccacctgggt gagcgtcatc ggctcatcca gttcgctgcc
    37141 ttccagcatc tccgtcatcc agctaaacag ttggttgacg ttcttcatgc gcatttcggc
    37201 ggctttcggg ctgggcgatg tttcgtacag ccaggattca taatccatgc cgtggatcag
    37261 atcgcgcacc gcggcaatcg gctcccgctc cgccagacgc tggatttctg ccaaccagtg
    37321 agtaaagcgg gtcaatgctt cataaccacg tccgctaagc gtctgactca ggcccatatc
    37381 aaagctggcg gtaaacatgc ttttattgcg cgtcatcgcc cactcaccca gctttttcag
    37441 cgtcgccggg ccaatctctc tcttcggcgt gttaacgata cgcagaaatg cgctgtcatc
    37501 gtccgggtta gtcagcacgc gcagataagc cagcaagtcc ttgatttcag gacgagagaa
    37561 aaacgacgta ccaccagaaa ttttgtacgg gatgcggttt tgcatcagga atttttcaaa
    37621 cactcgcgac tgatggttac cgcgataaag aatagcgtaa tatttgtact gcgttttatt
    37681 gacgaagtga tgcgcaatca gttcaccagt gacgcgctcg gcttcatgtt cttcgttatt
    37741 cgcgcttaaa actttaagct ctgtgccgta acccagttcg gagaacagac gcttctcaaa
    37801 gacgtgcggg ttattggcga tcaggatgtt cgccgctttc aaaatacgtc cggaagagcg
    37861 gtagttctgc tcaagcttaa tcaccttcag cgccggaaaa tcctgactca gcagcaccag
    37921 gttttgtgga cgtgcgccgc gccaggagta gatcgactgg tcgtcatcgc ccaccacggt
    37981 aaagcgcgcg cggctgccca ccagcagttt caccagttca tactggctgg tgttggtgtc
    38041 ctgatactca tccaccagca gatagcgaat tttgttctgc cagcgctcac ggacttcttc
    38101 attgcgttgc agcagcaacg tcggcaataa aatcagatca tcgaagtcga gaacattgca
    38161 cgctttcagg tgtgcatcat acagcccata acaatgggca aaaatacggt cccgctcacc
    38221 aatcgcactg gctgccgcct gggacggtgt tttgagatcg ttcttccagt tagagatggt
    38281 cgaaatcaac tgttgcagga gaactttgtc atcttcaatc agcccttcgg tcaactcttt
    38341 gagcaacgcc agctgatcgg tatcgtcaaa cagcgaaaag ttcgccttca tccccagcgc
    38401 cgcatactca cgcttgatga tatccagccc cagcgtgtgg aaggttgaga tcatcagccc
    38461 acgcgcctct ttgcgaccca gcgtctgtcc gacacgctct ttcatctcgc gcgccgcctt
    38521 attggtaaag gtcaccgccg cgatatgtcg cgcctgataa ccgcaaccgc ggatcagatg
    38581 ggcgatttta ttggtgatca cacgagtttt accggaaccc gcgcccgcca gcaccaggca
    38641 ggggccggta acgaattcga cagcttgttg ttggccgggg tttagacgca taggtgtatt
    38701 gctcaatctt cgaacggggg gaggattgta gcagaatcgc atttgaatgt gaccgcgtgt
    38761 aagccgctaa ccggttggct gcggatgttt aaatcagaga gggaagaccg aaaccggagt
    38821 tcatcgtgaa tccattagac ttagaaaata tcgggtcgta acgttgtgtt attacttttt
    38881 cagagtttac taaggagagg tgtactcgtg gcgattaatt tcagtcctaa ggttggtgaa
    38941 atactggaat gcaactttgg taactatcct gttagccaga atggacagtt cagcaccacg
    39001 tattacgatg gccgcattcc tcctgaaatg ataaaaaaca ggttagt
//
LOCUS       DAJVUK010000018        37559 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.018, whole genome shotgun sequence.
ACCESSION   DAJVUK010000018 DAJVUK010000000
VERSION     DAJVUK010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37559
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.018"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..274
                     /locus_tag="OQQ57_000909"
     CDS             <1..274
                     /locus_tag="OQQ57_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1955752.1"
                     /translation="IQMEIDEKFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNS
                     HRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF"
     gene            421..1938
                     /locus_tag="OQQ57_000910"
     CDS             421..1938
                     /locus_tag="OQQ57_000910"
                     /inference="COORDINATES: protein motif:HMM:NF014273.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HCS1955753.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEDDRIKAINEIRMAIHQ
                     VSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDK
                     NAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQIT
                     AMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
     gene            complement(1939..3088)
                     /gene="ybdL"
                     /locus_tag="OQQ57_000911"
                     /pseudo
     CDS             complement(1939..3088)
                     /gene="ybdL"
                     /locus_tag="OQQ57_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
     gene            3197..4285
                     /gene="hcxA"
                     /locus_tag="OQQ57_000912"
     CDS             3197..4285
                     /gene="hcxA"
                     /locus_tag="OQQ57_000912"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HCS1955754.1"
                     /translation="MPHNPIRVVVGPANYFSHPRSFNHLNDFFTDEQLSRAVWIYGKR
                     AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALA
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            complement(4295..4492)
                     /locus_tag="OQQ57_000913"
     CDS             complement(4295..4492)
                     /locus_tag="OQQ57_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HCS1955755.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(4674..6779)
                     /gene="cstA"
                     /locus_tag="OQQ57_000914"
     CDS             complement(4674..6779)
                     /gene="cstA"
                     /locus_tag="OQQ57_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HCS1955756.1"
                     /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
                     YLIAYRFYGLYIAKNVLAVDPKRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
                     VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRI
                     GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
                     APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
                     CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
                     MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
                     AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
                     LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
                     AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG
                     NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
                     YEPMPENVEEIVAQAKGAH"
     gene            complement(6960..7373)
                     /gene="entH"
                     /locus_tag="OQQ57_000915"
     CDS             complement(6960..7373)
                     /gene="entH"
                     /locus_tag="OQQ57_000915"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HCS1955757.1"
                     /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            complement(7376..8122)
                     /gene="entA"
                     /locus_tag="OQQ57_000916"
     CDS             complement(7376..8122)
                     /gene="entA"
                     /locus_tag="OQQ57_000916"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
                     EntA"
                     /protein_id="HCS1955758.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            complement(8122..8979)
                     /gene="entB"
                     /locus_tag="OQQ57_000917"
     CDS             complement(8122..8979)
                     /gene="entB"
                     /locus_tag="OQQ57_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
                     /protein_id="HCS1955759.1"
                     /translation="MAIPKLQAYALPESHDIPQNKVDWAFELQRAALLIHDMQDYFVS
                     FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAAL
                     REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW
                     WKLLSREVK"
     gene            complement(8993..10603)
                     /gene="entE"
                     /locus_tag="OQQ57_000918"
     CDS             complement(8993..10603)
                     /gene="entE"
                     /locus_tag="OQQ57_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase EntE"
                     /protein_id="HCS1955760.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
                     GELQLSYRELNQAADNLACTLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGE
                     HNLQDAINHPADGFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC
                     QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT
                     ALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
                     GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
                     CVDSLPLTAVGKVDKKQLSQWLASRASA"
     gene            complement(10613..11788)
                     /gene="entC"
                     /locus_tag="OQQ57_000919"
     CDS             complement(10613..11788)
                     /gene="entC"
                     /locus_tag="OQQ57_000919"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HCS1955761.1"
                     /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV
                     NGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK
                     QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA
                     AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR
                     QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH
                     LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC
                     DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVLASSPLGEWRETGVKLSTMLNVFGLH"
     gene            12163..13119
                     /gene="fepB"
                     /locus_tag="OQQ57_000920"
     CDS             12163..13119
                     /gene="fepB"
                     /locus_tag="OQQ57_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HCS1955762.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPTGLNASQSQGKRHDIIQLSGENLAAGLNGESLFLFAGDQKDADAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
     gene            complement(13123..14373)
                     /gene="entS"
                     /locus_tag="OQQ57_000921"
     CDS             complement(13123..14373)
                     /gene="entS"
                     /locus_tag="OQQ57_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HCS1955763.1"
                     /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWLVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
                     ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR
                     FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAEIGFLYAAIPLGAAIGAL
                     TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT
                     MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV
                     LLLLVLVELRRFRQTPPQVTASDS"
     gene            14484..15488
                     /gene="fepD"
                     /locus_tag="OQQ57_000922"
     CDS             14484..15488
                     /gene="fepD"
                     /locus_tag="OQQ57_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HCS1955764.1"
                     /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF
                     SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS
                     FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
                     VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN
                     SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGA
                     DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
                     "
     gene            15485..16477
                     /gene="fepG"
                     /locus_tag="OQQ57_000923"
     CDS             15485..16477
                     /gene="fepG"
                     /locus_tag="OQQ57_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HCS1955765.1"
                     /translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALM
                     GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
                     GVLVAMVLFGQDLTAIALAAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
                     FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE
                     MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
                     GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            16474..17289
                     /gene="fepC"
                     /locus_tag="OQQ57_000924"
     CDS             16474..17289
                     /gene="fepC"
                     /locus_tag="OQQ57_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HCS1955766.1"
                     /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPAHGHVWLDGEHIKHYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTHWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
                     ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
                     EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLERTAPSTANS"
     gene            complement(17286..18419)
                     /gene="fepE"
                     /locus_tag="OQQ57_000925"
     CDS             complement(17286..18419)
                     /gene="fepE"
                     /locus_tag="OQQ57_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
                     /protein_id="HCS1955767.1"
                     /translation="MSSLNIKQGSDAHFSEYPLASPSSNEIDLLNLIEVLWRAKKTVM
                     AVVFAFACAGLLISFILPQKWTSSAVITPAEAIQWQDLEKTFTKLRVLDLDVNIDRGG
                     AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS
                     KKKDEPSLYTSWTLSFTAPTSKEAQTVLSGYIDYISALVVKESIENVRNKLEIKTQFE
                     KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD
                     GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKANVNDVNFTPFKYQLSPSLPVKKD
                     GPGKAIIVILSALIGGMVACGSVLLRYAMASRKQDAMMADHLV"
     gene            complement(18634..22515)
                     /gene="entF"
                     /locus_tag="OQQ57_000926"
     CDS             complement(18634..22515)
                     /gene="entF"
                     /locus_tag="OQQ57_000926"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin non-ribosomal peptide synthetase
                     EntF"
                     /protein_id="HCS1955768.1"
                     /translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLL
                     ARAVVDGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ
                     ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW
                     LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR
                     SASADILRLKMEFTDGEFRQLATQLSGVQRTDLALALTALWLGRLCNRMDYAAGFIFM
                     RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD
                     SGRAAGDEPLFGPVLNIKVFDYQLDIPGVQAQTHTLATGPVNDLELALFPDEHGDLSI
                     EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQINATQV
                     EIPETTLSALVAEQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSV
                     AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF
                     ADVPDLTNLCYNAPLKPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
                     LWMQNHYLLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
                     AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTSV
                     PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV
                     AGDLYLTGIQLAQGYLGRPDLTASRFIADPFVPGERMYRTGDVARWLDNGAVEYLGRS
                     DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG
                     LPLDTSALQAQLRETLPPHMVPVVLLQLPLLPLSANGKLDRKALPLPELKAQAPGRAP
                     KAGSETIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM
                     VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYI
                     DPQWSIIGIQSPRPNGPMHTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG
                     IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS
                     TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL
                     DIYRQDCAHVDIISPGAFVKIGPIIRATLNR"
     gene            complement(22512..22730)
                     /gene="ybdZ"
                     /locus_tag="OQQ57_000927"
     CDS             complement(22512..22730)
                     /gene="ybdZ"
                     /locus_tag="OQQ57_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis protein YbdZ"
                     /protein_id="HCS1955769.1"
                     /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQ
                     SQESCQQWLEAHWRTLTPANFTQLQEAQ"
     gene            complement(22733..23935)
                     /gene="fes"
                     /locus_tag="OQQ57_000928"
     CDS             complement(22733..23935)
                     /gene="fes"
                     /locus_tag="OQQ57_000928"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HCS1955770.1"
                     /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
                     PIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
                     SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQA
                     PEIPAKEIIWKSERLKNSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL
                     THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV
                     VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
                     LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
                     QPLFHDRS"
     gene            24178..26418
                     /gene="fepA"
                     /locus_tag="OQQ57_000929"
     CDS             24178..26418
                     /gene="fepA"
                     /locus_tag="OQQ57_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore enterobactin receptor FepA"
                     /protein_id="HCS1955771.1"
                     /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
                     LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE
                     NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
                     GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
                     KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
                     RQGNLYAGNTQNTNSDAYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHT
                     RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
                     QQRMKDLSSNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
                     GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
                     QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
                     PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
                     ATRDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
                     SVNTHF"
     gene            26593..27213
                     /gene="entD"
                     /locus_tag="OQQ57_000930"
     CDS             26593..27213
                     /gene="entD"
                     /locus_tag="OQQ57_000930"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415115.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HCS1955772.1"
                     /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR
                     KRKAEHLAGRIAAIYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQ
                     PIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI
                     QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD"
     gene            complement(27335..27487)
                     /gene="hokE"
                     /locus_tag="OQQ57_000931"
     CDS             complement(27335..27487)
                     /gene="hokE"
                     /locus_tag="OQQ57_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokE"
                     /protein_id="HCS1955773.1"
                     /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL
                     AYEPKK"
     gene            27940..29058
                     /locus_tag="OQQ57_000932"
     CDS             27940..29058
                     /locus_tag="OQQ57_000932"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HCS1955774.1"
                     /translation="MPLPDFHVSEPFTLGIELEMLVVNPPGYDLSQDSSILIDAVKNK
                     ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQVTVFGQHVHVGCASGDDAIYLLHGLSRFVPH
                     FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
                     SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
                     YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL
                     HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD"
     gene            29124..29372
                     /locus_tag="OQQ57_000933"
     CDS             29124..29372
                     /locus_tag="OQQ57_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HCS1955775.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD"
     gene            29437..29805
                     /locus_tag="OQQ57_000934"
     CDS             29437..29805
                     /locus_tag="OQQ57_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HCS1955776.1"
                     /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRPG"
     gene            29899..30551
                     /gene="nfsB"
                     /locus_tag="OQQ57_000935"
                     /pseudo
     CDS             29899..30551
                     /gene="nfsB"
                     /locus_tag="OQQ57_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
     gene            30659..31906
                     /gene="ybdG"
                     /locus_tag="OQQ57_000936"
     CDS             30659..31906
                     /gene="ybdG"
                     /locus_tag="OQQ57_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel YbdG"
                     /protein_id="HCS1955777.1"
                     /translation="MQDLISQVGDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGT
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESILNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPAGNDIRSLAGAFKQ"
     gene            complement(31974..33350)
                     /gene="pheP"
                     /locus_tag="OQQ57_000937"
     CDS             complement(31974..33350)
                     /gene="pheP"
                     /locus_tag="OQQ57_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HCS1955778.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYICSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNEVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSHRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(33452..36595)
                     /gene="cusA"
                     /locus_tag="OQQ57_000938"
     CDS             complement(33452..36595)
                     /gene="cusA"
                     /locus_tag="OQQ57_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
                     /protein_id="HCS1955779.1"
                     /translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD
                     VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD
                     PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ
                     DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG
                     GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQVGPEMRRGIA
                     ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA
                     IDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMPFQGLNANIMS
                     LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL
                     FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK
                     IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN
                     EGDLLYMPSTLPGISAAEAASMLQKNDKLIMSVPEVARVFGKTGKAETATDSAPLEMV
                     ETTIQLKPQDQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG
                     IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV
                     ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL
                     ADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIVEKVQLKPGTSV
                     AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL
                     LWWMGFHLSVATGTGFIALAGGAAEFGVVMLMYLRHAIEAEPSLNNPQTFSEQKLDEA
                     LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI
                     IPAAYKLMWLHRHRVRK"
     gene            complement(36607..>37559)
                     /gene="cusB"
                     /locus_tag="OQQ57_000939"
     CDS             complement(36607..>37559)
                     /gene="cusB"
                     /locus_tag="OQQ57_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HCS1955780.1"
                     /translation="LGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKV
                     YPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEA
                     DIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIP
                     ESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKP
                     GMNAWLQLNTASEPMLLIPSQGLIDTGSEQRVITIDADGRFVPKRVAVFQASQGVTAL
                     RSGLAEGEKVVSSGLFLIDSEANISGALERMRSESATHAH"
BASE COUNT         8994 a        10490 c         9581 g         8494 t
ORIGIN      
        1 tattcaaatg gaaatagacg agaagtttat gaatcgcaaa atttcatttc gtggttcctc
       61 tttgctgaca ataattaata gcattgcagt tacagattta ctgggaatag tcccctatga
      121 actttataac tcccaccgtg actttcttaa tttaaaagag ataaaactag aacatccgtt
      181 accttcaata aagctttaca tttcctataa taaatcttct ttaaataatt tggtgttctc
      241 ccgatttatt gaccgtctaa atgagagttt ttgatatata actacagaca gctactataa
      301 ctttcatcta tttattcaca gcgcgaatga aaaataaaac actctgcttt acagtgttta
      361 ctttataatt aacagtctta tctcactgtt caccctgtaa cgttcagaga gcgtcttcag
      421 atgtctattt ataaaattcc tcttccgctc aatattctgg aagctgcacg agagcgtatt
      481 acctggacac tcaacaccct accccgcgtt tgtgtctcat tttctggcgg caaagactct
      541 ggtttaatgc tgcatctgac agccgaactt gcccgacaaa tgggcaaaaa aatctgcgtt
      601 ttgtttatcg actgggaggc gcaattctct tgcactatta actatgttca gtccctgcgc
      661 gagttgtaca ccgatgtcat cgaagagttt tactgggttg cgctcccgct tacgacgcaa
      721 aattcccttt cacaatacca acccgaatgg cagtgctggg aacctgatgt cgaatgggtg
      781 cgtcagcccc cgcaagatgc gataaccgat cctgactttt tctgctttta ccagccaggc
      841 atgaccttcg aacaatttgt acgtgagttt gccgaatggt tttcacaaaa acgtccggcg
      901 gcgatgatga tcggcatccg tgcggatgag tcctacaacc gttttgtcgc catcgccagt
      961 ttaaataaac aacgttttgc cgacgataaa ccatggacta cggccgcacc aggcggtcat
     1021 agctggtaca tttaccccat ttacgactgg aaagtggctg atatctggac ctggtatgca
     1081 aatcatcaaa gtctctgcaa cccactgtat aacctaatgt atcaggcagg cgttcctctg
     1141 cgtcatatgc gaatttgcga accttttggc ccggagcaac gacaaggatt atggctctat
     1201 cacgttatcg aaccggatcg ctgggctgct atgtgcgcac gagtcagcgg ggtaaaaagt
     1261 ggcggcattt acgccggaca tgacaatcat ttctatgggc atcggaaaat cctcaagcca
     1321 gaacatttag actggcaaga atatgcatta ttgctgctca atagcatgcc ggaagatgat
     1381 cgcatcaaag cgattaatga aatccgcatg gcgatccatc aggttagccc ctttcgtgaa
     1441 gagccagtgg attgcgttct gtgggttaaa aacagccaac ttatgcctaa tgattacaac
     1501 ccaaacaacg tggcaccacc cgaaaaaaaa ctgctgcaaa aatccattga aatagatggt
     1561 tttacccaac ccattgtggt cacacatacg gataaaaatg ccatggaaat cgtggatggt
     1621 tttcaccgcc atgaaattgg taaaggctca tcatcattaa aattacgctt aaaaggttat
     1681 ttgccggtga cctgtctgga aggtacgcgt aatcaacgca tcgccgcgac tattcgtcat
     1741 aatcgcgctc gtggacgcca tcaaatcacc gccatgtcgg aaatcgtccg tgaacttagc
     1801 cagttgggat gggacgataa taaaattggc aaagagctgg gaatggacag cgacgaagtg
     1861 ctgcgcctga agcaaattaa cggcctgcaa gagttgtttg ccgaccgtca atattcccgc
     1921 gcctggacgg ttaaatagct aaagctggcg caggcgttca gctgctgcca gcaacgtcga
     1981 ttccttcttg gcaaaacaga gacgaatcag tttatgtggg aagggatcgg cgcaaaacac
     2041 cgacagcgga atcgccgcca cgccgtgctc ccgcgtcagc cactggcaaa actcaacatc
     2101 atccagggta gaaacctcgc tgtaatccac cagcaaaaag tatgtacctt cacacggtaa
     2161 aatctccagc cggctttcat ttaaagcatt caccagaata tcgcgcttct ggcgataaaa
     2221 gtccggtaac gcaagataat gctcaggttc tgcacgtagc atatcagcaa gcgccagctg
     2281 tgccggggta ttcaccgaaa aggtcagata ctgatgtacc ttgcgaattt cggcgctgat
     2341 gggcgctggc gcaacacaat aacccacttt ccagccggtc atatgataga tcttgccaaa
     2401 tgaagaaacc gccactgccc gctcacgcag ctgcggatgc gccagcacac tggcatggcc
     2461 ctgttgtgaa aagttgatgt gctcgtagac ttcatcgcta atgacaaaaa tctcgtgccc
     2521 ggcgatcgcc tgccacaaag cggcgaaatc agcctgctgc cagacagttg cactggggtt
     2581 atgcggagtg ttgaggatca ccagtctggt gcgctcgctt aataatgcgg caaattcctg
     2641 ccagtcaagg tggttgcagt gccatacgct tcactattcc cccagaaagc gcgatggcgg
     2701 gggcgtaact gtcatagctg ggatcaaaac aaatcacttc atcgccattg cgcaccagtg
     2761 cggtaatcgc cgcgtataac gcttccgtcg cccctgccgt tacggtgata tcgctatcgg
     2821 catctggttg atagccatac aaacgttccg ttttctgagc aatcgcctcg cgcaaggcct
     2881 gcacgccggt catgggcgcg tattggtttg ccccctgggc aacgtggtac gccagccgct
     2941 cctgtaaata gcgcggacca tcaaaatcag gaaagccttg cgacaggtta atcgcctggt
     3001 gttgctgcgc cagcgcgctc atctgggtga aaatagtggt gccaagttgt ggaagtttgc
     3061 tttgtggaat cagagggtta tttgtcattt ttattgtacc tgacgaagtt gcgtgttgaa
     3121 ggcactataa cacgatgcta gtatttggca atcaagacgt ttagatgtct aaataaaaca
     3181 ataaggacaa cacaacatgc ctcacaatcc tatccgcgtg gtcgtcggcc cggctaacta
     3241 cttttcacat ccaagaagtt tcaatcacct gaacgatttt ttcactgatg aacaactttc
     3301 tcgcgcggtg tggatctacg gcaaacgcgc cattgctgcg gcgcaaacca aacttccgcc
     3361 agcgtttgga cttccagggg caaagcatat tttgtttcgt ggtcattgca gcgaaagcga
     3421 tgtacagcaa ctggcggctg agtccggtga cgatcgcagc gtggtgattg gcgtcggcgg
     3481 cggcgcactg ctcgacaccg cgaaagccct cgcccgccgt ctcggtctgc catttgttgc
     3541 cgttccgacg atcgccgcta cctgcgccgc ctggacaccg ctctccgtct ggtataacga
     3601 tgccggacag gcgctgcatt atgagatttt cgacgacgcc aattttatgg tgctggtgga
     3661 accggagatt atcctcaatg caccgcaaca atatctgctg gcggggatcg gtgacacgct
     3721 ggcgaaatgg tatgaagcgg tggtgctggc tccgcaacca gaaacgttgc cgctaaccgt
     3781 gcggctgggg atcaataatg cgcaggccat tcgcgacgtc ttgttaaaca gtagcgaaca
     3841 ggcacttgcc gatcagcaaa atcagcagtt aacgcaatca ttttgcgatg tggtggatgc
     3901 tattattgct ggtggtggga tggtcggtgg tctgggcgat cgttttacgc gtgtggcggc
     3961 ggctcatgcc gtgcataacg gtctgactgt cctgccgcaa accgagaagt ttcttcacgg
     4021 caccaaagtc gcttacggaa ttctggtgca aagcgccttg ctgggtcagg atgatgtgct
     4081 ggcgcaatta accggggcgt atcagcgttt tcatctgccg actacgctgg cggagctgga
     4141 agtggatatc aataatcagg cggagatcga caaagtgatt gcccacacct tgcgcccggt
     4201 ggagtccatt cattacctgc cagtcacgct gacaccagat acgttgcgtg cagcgttcga
     4261 aaaagtggaa tcgtttaaag cctgacgtgc aaatttagca gcagcgcgcg ccgccttttc
     4321 caccgtagcg cgcgtcctgc cgctcacgga aaaactcctc gtaggtcatc ggcgtttgat
     4381 cgggatggtt aacccgcata tgttcgacat agttgtcgta atcaggcata ccaatcatca
     4441 gcttcgccgc ctgacctaaa tattttccgg cttttgccag tgaatcaaac atcttggcct
     4501 ccgctaacca tgttgctgaa agagtgccgg atgcggcgtg aacgctttat ccggcctaca
     4561 aatgctatca acgcactcgg tcagtcccct cgccccatcg gggagagggt tagggtgagg
     4621 gggaaccctc ggcactatgc caacattcgc caacatcccc cctcactctg actttagtgc
     4681 gcgcctttcg cctgcgctac gatctcctcg acattttccg gcatcggctc atacggcgtt
     4741 tctttcgccg ttggcttcgg atctttcaat gccgcaagtg ccgtcttaat cgagaacagt
     4801 gccagaacca ccacgaccac cataaagaag atggttaacc cggcatccag acggttgttg
     4861 aacaccagtt gcgccagctg tgactcagta tactgcgacg gaatattgcc gctgtcgatc
     4921 attgcctgga acttgttagc aatggccagg aagccgactt tcgcatccgg gctaaacgct
     4981 ttctgccagc cagcggtcag ggtacaaatc agcagccagg ccgttggtac cagcgccacc
     5041 caggcgtaac gttgacgttt catcttgaac aacaccacgg cacagagcat cagcgccatc
     5101 cctgccagca tctggttggc aataccaaac agcggccaca gagtgttaat accgcccagc
     5161 ggatcgacca cgccctgatg gaggaagtag ccccacgcca gtacgcacag cgccgttgcc
     5221 agcaggttag caggcagtga atcggtccgc ttcaggccag gagacaccac gcccagcaga
     5281 tcctgcaaca taaagcgcgc agcacgcgta cccgcatcta ccgccgtcag aataaacaga
     5341 gcttcaaaca gaatggcgaa gtgataccag aacgccacat ccatcatacc acccagcgca
     5401 ccgtgcagga tgtaagccat ccccaccgcc aacgtcggcg caccgcccgc acgggaaatg
     5461 atcgactgtt cacccacttc gctggcaatc tggttgagcg tatctggtgt aatgctaaag
     5521 ccccagctac tcaccacctg cgcggcagaa gcgaccacat ccgccgtccc tgctggagcc
     5581 agcaccgcca ttgggctgtt catggcaaag taaacgcccg gatcgatgat acaggcggaa
     5641 accagcgcca taatcgccac gaaggattcc attaacattc caccgtagcc gataaaacaa
     5701 gcctgccctt cgttcgccag catcttcggc gtggtgccgg aagagatcag cgcatggaag
     5761 ccagacaccg cgccacaggc gatggtgata aacaggaacg ggaacaggtt accggtccat
     5821 accgggccag tgccatcgac aaatttggtc agcgcaggca tggtcagcgt cgggcgcata
     5881 atcaaaatgc ctaccgccag accgacgatc gtcccgattt tcaggaaggt agagaggtag
     5941 tcacgcgggg ccagcagcaa ccacaccggc agcaccgccg ccacaaaacc gtaacccacc
     6001 agcatccagg tcagctgcac gccggtaaag tcaaagtacg gtgcccaggt cggactttct
     6061 gccacccagc cgccagagat aatggcgaaa atcaggaata ccagaccgat gaccgacact
     6121 tcaccaatac gccccggacg cagatagcgc aggtagatcc ccataaacag cgccagcgga
     6181 atggtgaacg caacggtata cgttccccac gggctatgag tcagggcttt caccacgatc
     6241 atcgccagta ctgcaaggat aatgaccatg atcataaagc aggccaccag cgctatcacc
     6301 ccggcggttg gccccatctc ttctttgacc agctcaccca gcgatcgacc gtcacggcgc
     6361 gtagaaacaa acagcaccat gaaatcctgc accgcaccgg cgagaaccac cccggcgagt
     6421 agccagatca tccccggcag gtagcccatt tgcgctgcca gcaccggccc aaccaacgga
     6481 cctgctccgg cgatggccgc aaaatggtga ccgaacagca ctttcttgtc cgtcggcaca
     6541 tagtccagcc cgtcgttatg gcgcaccgct ggcgtcatac gcttcgggtc aaccgccagc
     6601 acatttttgg cgatatacaa cccataaaaa cggtaagcga tcagatagat acagaccgac
     6661 gccaccacaa tccacagcgc gttgatctgt tccccacgat ttaaagcaat gtatcccaga
     6721 gcaaatgctc ccattacaga gagcactgtc cagacgaggt atttccctga tttgttcata
     6781 gttgttatcc gtgtgcgtgt ccatagagat gttacatttt gtttctataa catctttgta
     6841 cgatttaaca acacggtaac tatgtaaatc ggagttgaaa ccaatattta acttaacaat
     6901 gttaactcga tcactccgtt aaccgagttt tcctgcaatc tcatttaatt ctgtcgggct
     6961 catcccaaaa ctgccgtacc cagccgacaa gtgcagcaac gccgcccctg ttcatcgaaa
     7021 acgacgattt cccagctctg attttgccgc ccaagatgca gcggctggca gacgccgcgt
     7081 accttgcctt cagacaccgg gcgatgatgg gtggcgttaa gttccgtgcc caccacacac
     7141 tgcccgtcac gggtcatcat aaatccggcc atcgatccca gcgtttcagc cagcgccgcc
     7201 gacgcgccgc catgcagcag gccaaacggc tgatgagtac gggtatcaac cggcatttcg
     7261 gcttccagca catcatctcc cagacgggta tacacaattc ccagatgcgc caccattgtg
     7321 ttatcgctgg tggcgttcag ttcgtcgagc gttaaatggc gtttccagat catgcttatg
     7381 cccccagcgt tgagccgcca tcgaccacaa tatcctgtag ggtgatatgg ctggcgaggt
     7441 cagaggcgag gaacaaaatc gtgttggcga tctcttgtgg acgggcgatt ttccccagcg
     7501 gaatgccgag tttaaactgc tcgccaaagc cgcgaatacg ctgttcttcg gcgtcatcgc
     7561 tcacccacag cgtgcgttgc atatcggtgt cggtggagcc aggcgaaacc acattacagc
     7621 gcacgccgct acccgccagt tccagcccga cgctcaacgc caggcttttc agcgccgctt
     7681 tcgatgcgcc ataagcactc ataccaatac gcggcgtgtg tgcggcgtcg gacgccacag
     7741 tgacaatcgc cccgccccgc tgacggcgaa actggttcat ggtttgctgg aacaggttaa
     7801 acgcaccgcc gacgttaacc gcaaaagtct gctgccagtc ctctttactg agctgatcgg
     7861 tcgcgcccat gcgcaaaatt cccgccgcat tgatcagcac gtccagtcgc tccgtttcag
     7921 ctaacagtcg ctgacatacc tgcgccacct gcccggcgtc ggcaacatcc attacttcgg
     7981 tcgcaaaggg atattgctcc tgagtgaacg cttgatcaaa acctgtaact ttcgctcccg
     8041 cctcaacaaa cgccagcgcc gtggcgtagc cgataccttt acctgcgccg gttacccaga
     8101 catttttacc gctgaaatcc attatttaac ctcgcgggag agtagcttcc accaggcgtc
     8161 gatggtcggg tttttcgcca gcatgacaaa gtcgatatca ccatgcactt tgcgccagcg
     8221 cgccgccagc gccatcatgc gcaccgaatc cagaccgtag tcgatcaggt tgtcgtcatc
     8281 gaacggttca tcggactcgt ccagcaacgg caggataacc tcacgcagcg ccgctttgct
     8341 ggcggggaca ggtgctggca gtaattcttc agtcatcacc acccggccag accgcccggc
     8401 cacatatttc agcgacatca aatgctcgtc acggctgaaa tcggccagcg catccgccac
     8461 cataaacggt ttaatatcgc gcataaatgc gtcggttgcg gtggtcatac agccaatgtg
     8521 ggcatatacc ccggtaataa tcagctggtt acgtccactc tctttgagca tttgctccag
     8581 cggagaacga tgaaacgcgc tgtagcgcca cttcaccagc accgtgtcgt cggcatctgg
     8641 cgtcaggcga tccaccacct tttgctgttc cggcgaacgg gtcaggcccg gcccccacat
     8701 atcattcaac agcgcccgat cttcatcgct ctgctctttc ggctgggcgg tgtaataaac
     8761 tgggatattg tgctgtttgc agtagtcgcg cagcgcagca atattcgcga tcacctgctc
     8821 catcatcggg cagttctcgc cccagaagct gacaaaatag tcctgcatat catggattaa
     8881 caacgcggca cgttgcagtt caaaggccca gtcaacttta ttctgcggaa tatcgtgaga
     8941 ctccggcagt gcgtaagcct gtaattttgg aatagccatc gtgttctctc cttcaggctg
     9001 atgcgcgtga cgccagccac tgacttaatt gttttttatc gactttcccg accgccgtca
     9061 gcggaagtga atctacacac tccacgcgat ccggtaattt aaattcggca ataccctgtt
     9121 cacgcaggaa acgacgcacc tgcaccgcgc gcagcggctc ttttaccacc agataagcac
     9181 agcttttttc gcccatcagc tcatcttcca tgctcaccag tgcggcatag atcaccgccg
     9241 gatggcgcag cagcaggttt tcgatctctt cggcagcgat cttctcgccg ccacggttga
     9301 tctgatcttt ctcgcgcccc tgcacggtga tgtaaccctc tggatcaata gagatcagat
     9361 cgccggaaca gtaaaaaccg ttggcatcaa aggcgctggc attgtgctgc ggacttttgt
     9421 aataaccgcg gaaggtgtac ggcccgcgcg tcatcaggcg tccgacttcc ccttgcggca
     9481 gtggatttcc ttcggcatcg gcaacccaca cttcatcgtc cggacacatt gggtaaccct
     9541 gggtatggat aattttctcc gcgctatcat caagacgggt gtagttcacc agcccttccg
     9601 ccatgccaaa cacctgctgc aactggcagc caatctcagc gggaatacgc gccgcaaggg
     9661 tggcagaaag acgtgcgccg ccgacctgta acagtttcag cgaggcaagc tgcgcccggc
     9721 tttcgccttc agccagcgcc tgcaaccaca ggctgactgc cggcggcacc agcgcggtga
     9781 cgttcacctg atgtttttca atcaatggga agcaaagcgt agcgctggga tcggccgcca
     9841 gaacaaccgt tcctccggca agaaagacgc ccagcgatcc tggcgaactc atggcgtagt
     9901 tatgagccgc cgggatcgcg cacaggtagc gcgtctgttg tgtgaactga caaatctcga
     9961 cgctacgacg cacgctgtag tagtagtcgt tatgagtgcg cgggatcagc ttcggtgtac
    10021 cggtggtgcc gccggaaagc tggaaatagg ccacttcatc agcaggtgat ggcgtggcag
    10081 taaaaccgtc tgccggatgg ttaatcgcat cctgcaagtt atgctcaccg ctgtcgttgt
    10141 gcagttgcac cacgcgaatg gaggaatgtt ctgtgacgaa agtattgagg aaatcatccc
    10201 cgctaaacag cgcatgttgg cgatcggcaa tcagcaatgc gggttcaatc tggctggcat
    10261 aggcgttcag ttcactacgc tgatggctga acaacgccag caccggcgca acgcccagtt
    10321 tcagcagcgc gaaaaaggta atatacaatt cagcgacgtt acccagttgt accagcgcgg
    10381 tttcaccagg tttaatgccc tgacggcgta aagtacacgc gaggttatcc gccgcctgat
    10441 tcagctcccg gtaactcaac tgtagctcgc cgtcgataac cgcgatgctg tcactcgcag
    10501 cgtggcgagt cagaatgtcg gtcagcggca aatcctgcca gtagcctttt tcccgatagc
    10561 gacgggcaaa ctcttccggc cagcgggtga atggaatgct catcctcgct ccttaatgca
    10621 atccaaaaac attcaacatg gtagaaagtt tgacgcctgt ttcgcgccac tcacccaacg
    10681 gtgacgacgc aagcacaatc cccgctccgg caaacagacg cacctgattt tcccgcagct
    10741 tcgcgcagcg gatggtcacc acccattcgc cgttaccttc gctgtcacac caacccacaa
    10801 tgccgccaaa cagttcgcgg tcgaacggct ccagttcagc aataacctga gtcgcggcct
    10861 gatgcgggaa accgctcagc gcgggggtcg gatgcagcag acaggccaga gtcagtgcgt
    10921 tttcttgcga attcgcttta ccttcaaagg gagttgcgag atgccacagc gtcggcgtgg
    10981 taatcaattg tggagaggag ggaacgtgta actcactact gcgttcgcgc agtacctctt
    11041 tcatcgcctg agtcaccagt tcatgttcat ggcgatcttt ttctgacgcc agcagacgat
    11101 tacccgcttc gcgatcgagc acttcatccg gctgacgacg cgcggaaccg gctaacggaa
    11161 tggagctaaa acgctcgccg tctttacgta gcagcagttc cgggctggcc cccagcagga
    11221 cgccaccatc agccagcggg acatggaagt tgtaactaac cgggttttgc gcaatcaacc
    11281 gttccagcaa tacgccacta tcaatggcgg cgtcagtggt gatatcaatc aaccgtgaca
    11341 acaccacttt gtcaacctgc ggcgtggcgg taagtgcggc agcgcgggca accatctgtt
    11401 caaacgtggt ttgttccgga attgcctggc gttccaccac attcagcgac tggctgcggg
    11461 tgaaacggcg ggcggaagct tgtttttcct gacgggagaa cgactgccag gattcaggaa
    11521 tatacagcga cgaaggctga cgtggatcga agggaatcgc cccgaccatc accggatttt
    11581 tgatgccctg cactttggca tcggcaaaca gcgcggcgag tttttgctgg aagggactgt
    11641 cgggcgaatc cccgttcaca gccggttcat cgaagcgggc gaaacatcct gacgtcgtaa
    11701 aactgcggta cggcgacata aagaaaaagc gattgggcgc aagtgttgcc atggtctgct
    11761 gtacttcctc agccagtgac gtatccatat catcctccac aaaatgataa aggctttaat
    11821 aatgattatc atttatattt tcggtcgcta acctaaaagc aaacgcgcac tatgtcaact
    11881 cttgaggtaa cgcaatctgc aactcggggt tgcatctggt tgtggttaca atgaaaatga
    11941 gaagcattat tgatggattc gcataagcgc aatgtgatgt cctgcgccgt tcttccccct
    12001 ctcccttcca gggagagggc tggggtgagg gtcaatattc gcaccagtgc tggctgctcc
    12061 catcacccta accctctccc caaaggggcg agggtacgga tagtgcgctt tgtcgaattt
    12121 gtcattacgc ccttaacctt attaataaca ggaagctgat ttgtgagact cgccccgctc
    12181 taccgcaacg cccttctatt aacaggactt ttgctttccg gaatagccgc agttcaggcc
    12241 gccgactggc cgcgtcagat tactgacagc cggggcactc ataccctgga aagccagccg
    12301 cagcgtattg tttccaccag cgtcaccctg accggctcac tgctggcgat tgatgctccg
    12361 gtgattgcca gcggcgcgac cacgccaaat aaccgcgtcg cggatgacca gggcttttta
    12421 cgccagtgga gcaaggtggc gaaagaacgc aaactacaac ggctctatat cggcgaaccg
    12481 agcgccgaag ccgttgccgc gcaaatgccg gatctgattt taattagcgc aaccggcggg
    12541 gattcggcgc tggcgctgta tgatcagctt tccaccatcg ccccgacatt aatcatcaat
    12601 tacgacgaca aaagctggca gtcgctgtta acgcagcttg gcgaaattac cgggcatgag
    12661 aaacaagcgg cagagcggat tgcacagttt gataagcaac tggcagcggc gaaagagcaa
    12721 atcaaattac cgccgcagcc ggtcactgct attgtctata ccgccgctgc acacagtgcc
    12781 aatctctgga cgccggaatc agcacaaggg cagatgctgg aacaactcgg ctttacgctg
    12841 gcgaaattgc ccacagggtt aaacgccagc caaagccagg gcaaacgcca tgacatcatt
    12901 cagcttagtg gagaaaatct ggctgcaggg ttaaatggcg agtcactatt cctgttcgcc
    12961 ggtgatcaga aagacgccga tgcgatttat gccaatccac tgctcgcgca cctgcccgca
    13021 gtacaaaaca agcaggttta tgcgctggga accgagacgt tccgcctgga ttactacagc
    13081 gccatgcaag tgctggaacg acttaaggcg ctgttttaag cattaactgt cggacgctgt
    13141 cacctgcggc ggcgtctggc gaaaacgtcg caactccacc agcaccagca ataacaacac
    13201 gccgataatc aacaaaccaa aaccgctcgc gcttgcggaa gcaaccggtg tcatcatcgc
    13261 tcccagaccg cctaacagcg ccgcgcctat ggcatcgccc gtcacgtttt gtgccgtcca
    13321 caaaccgttg attcgcccta acattgcttc cggcgtttgc gtttgcagca ttgtatattg
    13381 cagcaacgaa ctgaccgcac tcagccagcc gaacagcgcc agacaaacca cgcctaaaat
    13441 ccacatcggc atcaggccaa ataaaccaat ggcgaggaac gatcccaacg tggagagcaa
    13501 catcaacaat cctggtcgcg cgctatgcgc cagtttccca ctggttaatg cgccaatagc
    13561 cgcaccgagc gggatcgccg catagagaaa accaatctct gccgccgaca tctgccagtt
    13621 gtcagccagc gccggataca gtacccgcac cgcgctcgcc atcgtcaata aaccacccag
    13681 caacgcaatc ccgcccacca gcgggctggc gagcagaaaa cgaaatcctg ccagtaatga
    13741 tttcaacgga tgctcgcgcg gctgcggtgg cggtggcaac gccggaaggc ttaacaacgg
    13801 tagcaaggta ataaacgtgc ccgccgccgc cagcccgtag ttccaggcta cgccaccggt
    13861 cgccagcaat aaaccgccaa tcatgggcga aatcaccgac cccagacgca cggtcaacat
    13921 ggtgatcgcc ccggcctgca ttaagttttc acgccctacc agtgctggtg tcgccgccaa
    13981 tagcgccgta acgccaagcg atgcgaaaaa accatcccat aaaccaagta aatagattgc
    14041 cagcaatgac ggctccggca gcagtgcatt aaggcacagt ccaatgaagc caatgccaca
    14101 ggtgccgcgc gccagcaaaa tcactttttt gcgctcatag cgatccgcca gcacaccgcc
    14161 aaccatcagg ccaacaaaca tcgcgccgcc ggtcagcgtc accgaaagcc ccaccagcca
    14221 ggtagaatgc gtcatcatct ggatctgcac cggcaccgcg acgccgagca aacccagaga
    14281 cacaattgag ataaaacgag cgaggaatac tgcgcgaaac gccgggtgcg ttttcaacag
    14341 gctgaggtta agcagccagg attgtttatt cattacaatg ccttgccatc aaatatttta
    14401 aatacctatt cttaggctgc acatgctaac atatccaaat aagatcgata acgataatta
    14461 atttcattat catggaagtt cgtatgtctg gttctgttgc cgtgacacgc gccattgccg
    14521 tgcccggatt gctgttatta ctgattatcg cgacggcatt aagcctgctc attggggcaa
    14581 aatcactccc cgcttccgta gtgctggagg ccttctccgg cacctgccag agcgccgact
    14641 gcaccatcgt gctcgacgcg cgactgccgc gcacccttgc cggtttactg gcaggcggcg
    14701 cgcttggcct tgccggggcg ttgatgcaaa ccctcacccg aaatccactt gccgaccccg
    14761 gcttgcttgg cgtgaacgcc ggagccagct ttgccattgt gctgggtgcg gcgctgtttg
    14821 gttactcatc cgcgcaggaa caactggcga tggccttcgc cggggcgctg gtggcctcat
    14881 tgattgttgc ctttaccggc agtcagggcg gcgggcagtt aagtccggtg cgtttaaccc
    14941 tggcgggcgt ggcgctggcg gcagtgctgg aagggctgac cagcggcatc gccctgctta
    15001 atcctgacgt ctacgatcaa ctgcgtttct ggcaagccgg ttcgctggat attcgcaatc
    15061 tacatacctt aaaagtggtg ctgatcccgg tgctgatcgc cggagcaacc gcgctattac
    15121 tgagccgcgc gctgaacagt ttaagcctcg gcagcgacac cgcgacggcg ctgggcagtc
    15181 gcgtggcgcg cacacagtta attggtctgc tggcgattac cgtgctttgt ggtagtgcga
    15241 cagcggtagt tggcccgatt gcctttattg gcctgatgat gccgcatatg gcgcgttggc
    15301 tggtgggtgc cgatcatcgc tggtcgctgc ccgtaacgct gcttgctacc cctgccctgc
    15361 tgctgtttgc cgatatcatc gggcgggtga ttgtgcccgg tgaactgcgc gtttctgtgg
    15421 tcagtgcctt tattggtgca ccggtgctga tcttcctcgt gcgacgtaaa acgcgaggtg
    15481 gtgcatgatt tacgtctctc gccgattact catcacctgt ttgctgctta tttccgcctg
    15541 tgtggttgca ggtatctggg gattacgcag cggtgccgtc acgctggaaa cctcgcaggt
    15601 attcgccgcg ctgatgggcg atgcgccgcg cagtatgacg atggtggtca ccgaatggcg
    15661 tttaccacgc gtgctgatgg cgctgttgat tggcgcggca ctgggcgtca gcggtgcgat
    15721 ttttcagtcg ctgatgcgta acccgctcgg cagccctgac gtaatgggct ttaacaccgg
    15781 ggcgtggagc ggcgtgctgg tggcgatggt gctgtttggt caggacctga cggctatcgc
    15841 gctggcagca atggtgggcg gcattgtcac ttctctgttg gtctggctgc tcgcctggcg
    15901 taacggtatc gacacctttc ggttgattat tatcggcatc ggcgttcgcg ccatgctggt
    15961 ggcctttaat acttggctgt tgctgaaagc gtctttagaa acggcgctaa cagcgggttt
    16021 gtggaatgcc ggatcgctca atggcctgac gtgggcaaaa acttcgcctt ccgcacccat
    16081 cattatattg atgctcattg ccgccgcctt gctggtgcgg cgaatgcgct tgctggagat
    16141 gggcgatgat accgcctgcg cgctgggcgt cagcgtcgag cgttcgcgtc tgttaatgat
    16201 gctggttgca gtggtgctta ccgctgcggc aacggcgctt gccgggccga tttcctttat
    16261 tgctttagtc gcgccgcaca ttgcccgacg cattagcggc accgctcgct gggggctgac
    16321 ccaggcggcg ctgtgcggag cgctgttact gctggcggcc gatctctgcg cccaacaact
    16381 gtttatgccg tatcaacttc cggttggcgt cgttaccgtc agcctcggcg gtatttacct
    16441 tatcgtcttg ttaattcagg agtctcgcaa aaaatgaccg aatcagtagc ccgtttgcgc
    16501 ggcgaacagt taaccctggg atatggcaaa tataccgttg cggaaaatct gactgtagaa
    16561 attcctgatg gtcacttcac ggcaattatc ggaccaaatg gctgtggtaa atccacgtta
    16621 ctgcgtacct taagccgcct gatgacgcct gctcacgggc atgtctggct ggatggcgag
    16681 cacattaaac attacgccag taaagaagtt gcacgccgga ttggtctgtt ggcgcaaaat
    16741 gctaccacgc cgggcgatat caccgtgcag gagctggtgg cgcgtggacg ttatccgcat
    16801 caaccgctgt ttacccactg gcgcaaagag gatgaagaag cggtaacgaa agcgatgcag
    16861 gccacgggaa taactcatct ggcagatcaa agcgtggata ccctttctgg cggacaacgc
    16921 cagcgagcgt ggatcgcgat ggtgctggcc caggaaacgg caattatgct gctcgacgaa
    16981 cccacgacct ggctggatat cagtcatcag attgatctac tggaactgtt aagcgaactg
    17041 aaccgcgaga aaggctatac cctggcggcg gtgctgcacg atcttaatca ggcctgtcgt
    17101 tacgccagcc atttgattgc attgcgggaa gggaaaattg ttgctcaggg agcgccgaag
    17161 gagattgtca ctgctgaact gattgagcgc atttatggtc tgcgatgcat gatcattgac
    17221 gatccggtag ccggaacgcc gcttgtggtg ccgctcgaac gaacggcacc ttcaaccgca
    17281 aatagttaaa ctaagtggtc tgccatcatg gcatcctgtt ttctggatgc catcgcatag
    17341 cgcaataaca cgctaccaca agccaccatc ccgccgatca gcgcggaaag gatcacaata
    17401 atcgccttac ccggaccgtc ttttttcact ggcaatgacg ggcttaactg atatttaaac
    17461 ggcgtaaaat tcacatcgtt gacatttgct tttgttaatt gctcgacaag atactgccga
    17521 ttacgtaatt caccgttcag ttccgcaacg tcagtaaccg ctttttcaat ttccagtttg
    17581 cgttcaatac cgtctgcgcc gagagaaata gagaaatcgg ggtcatcttt aacggcctga
    17641 ccattactgt atacgggctt tttaattcct gccgcgttgg caatgtcgag tgaataattg
    17701 aggcgctgaa tgtttgcatc aagttgattt ttcgttttaa tgcgatcctg agccagtttt
    17761 tctttttcaa actgggtttt gatctccagt ttattacgga cgttttctat cgactctttc
    17821 accaccaacg cagagatata atcgatatac ccgctcaaaa cggtctgcgc ctctttactg
    17881 gttggcgcgg taaaacttag cgtccaggag gtatacagtg acggttcatc ttttttctta
    17941 ctggcattgt catcaaccgc tttcattttt tcgctcaatg caacaatagc gcgatgcaaa
    18001 tccagttcat cgattttcgc ctcttttaat tggtccatca cataaggtga tgaacgcagg
    18061 tactcttcca gcaagctaac agactgaaac ttcttgataa acaggttaaa tgcaccgcca
    18121 cggtcgatat taacatcgag atcaagaacg cggagtttgg taaaggtttt ctccaggtcc
    18181 tgccactgaa tggcttcggc gggagtaata acggctgagc tggtccattt ttgcggcagg
    18241 atgaaagaga tcagtaaacc tgcgcaggca aatgcaaaaa cgaccgccat gaccgttttt
    18301 ttggcccgcc ataaaacttc gattagatta agtaaatcaa tttcattact actgggcgac
    18361 gccagaggat actcggaaaa atgagcgtca cttccctgtt taatattcag tgatgacatg
    18421 ggtataacct gaaaatgagt ccaatagggg gaaatctcca cggcgctcac tttaccagtt
    18481 ggtgagaatt atccgaagct gaagtttgta aattccttcc actgaatgca acattcactc
    18541 tatttaagag aaatattcat caaacctata aatcaaacaa ataaaaaacc cataattatt
    18601 ttctgtaatt atgggtttat agataatatt aatttacctg tttagcgttg cgcgaataat
    18661 cggcccaatt tttacaaacg cccctggaga gataatatcc acatgcgcac aatcctgacg
    18721 atagatatcc agctcggcaa tccagggcga ccaagcgcgt tcggggctca taccttcctg
    18781 aagcgtgcgt tcagcaacaa acagcgtcgc tttaccatca aacggtacgc tatgagcagt
    18841 cgtcagcaga cgcacagcat cagcgtagtt gccttcaatg gtggtaaaca actccgttga
    18901 agtacttccc tgctgtgccg ccaggaaggc ctcgcgttcg cggttaatct ccgccagcac
    18961 ttccgggtcc agaccattag cctctttttc ctgccagttt tgcgtttctg gcggccaggt
    19021 atccagcaaa ccaagaaatg ccacctgttc gccacgggca cgcagtcgcg ccgcaatgcc
    19081 ctgcgccagc gtaccgccaa gggaataccc cagcaggtaa taagggccgt gcggttgttg
    19141 ttcaagtaac gttgccagat gcgcttcaca gacttcatcc agatttgccg cggtatgcat
    19201 ggggccattg gggcgcggcg actgaatgcc gataatcgac cattgtggat cgatataacg
    19261 cgagagcacg ctaaactgcc aggcaaaacc ggatgccgga tggaaacaaa acagcgtcgg
    19321 gccattacct tcacgcaacg gcagaatggt ttcgaatccc atacgccggg tgctgtcttc
    19381 ttcagcatca ataatcgttg ccagtttagc gacggttgac gcgaccatca cttgccccgg
    19441 cgtcacctgg cgggcaacct gccgacttaa ctgcgctgcc agtttcattg ccagtagcga
    19501 atgaccacca agcgcaaaga aatcagcatc ggcatcctgc acgtcacaac ccagcaacga
    19561 cgcgaatgcc gcggcaataa tcgtttcact gcccgctttt ggcgcacgcc ccggcgcttg
    19621 tgccttcagt tcaggcaacg gtaaggcttt gcgatccagc ttgccgttgg cgctaagagg
    19681 taacagtgga agttgcagca gaaccacggg caccatatgt ggtggcaatg tttcgcgaag
    19741 ctgcgcctgt aatgcgctgg tatccaacgg cagacctgat tgcgacacca gatagcccac
    19801 caactgacgc gcatcaccac cggtggctgc cgcctggtta atcacacagg cgtgggtaac
    19861 ggcttgttcg acatccggca gcgcctgcat cacgcgatcg atttcgccca gttcaatacg
    19921 ctgcccgcga atttttagct gatcgtcact gcgcccgagg tactccaccg cgccgttatc
    19981 cagccagcgg gcaacgtctc cggtacggta catccgttca ccagggacaa aaggatcggc
    20041 aataaagcgg ctggcggtca gatcgggtcg tccaagatac ccctgcgcca gttgaatgcc
    20101 ggtgagatag agatcacccg ccacacccgg cggcaccgga tgcatcatcg catcaagaat
    20161 acgcagaccc gtattccata ccggataacc aatcggcaca ctgctgccgc gcacctgtgc
    20221 cagttcctcg ccaaaagccg gataccagct gacatctacc gccgcttccg tcgggccata
    20281 tagattatgc aacggcacgc tggttaactg ttgccattcg cggcataaat cagccggtaa
    20341 ggcctcacca ctacagaaaa cctgtttcaa cgtcgcgcaa ctctggcgag cggtttgcgg
    20401 cgtcagcgat gcaacaaatg ctgccagcat cgacggcaca aagtgcgtgg tcgttacgcc
    20461 atattcggca aagaattgct gcatagcgag cgggtcgcgg tgcgcttccg gttcagccat
    20521 caccagttta gccccggcaa taaacggcca gaaaaactcc cacaccgaga catcaaaact
    20581 gcacggcgtt ttttgggcaa cgacatcttc gcctgtaagc agataatgat tttgcatcca
    20641 caacaggcgg ttaacgatag ccgtctgccc gaccattacc cctttcggcc tgccggtgga
    20701 gccagaggta aagatgatat aagccgtgtg atgcggttgt gaaagttgca gcggcgcact
    20761 gccctgcggt ttaagcgggg cgttatagca aaggttggtt aaatctggaa catcggcaaa
    20821 gcgcggcagt tgatcgtcgg tggtgattaa cagcgacgga cgcgcatctt ccagcatcat
    20881 tttcaggcga tcgtccggat agccggtatc cagcggtagc caggccgcgc cagcttcaac
    20941 tatcgcatgt agcgccaggg tcaaaaagac cgagcgcggt agcgccaccg ccacgctgtc
    21001 gcccggttta acgccacgct cacgcagcag attcgccagc gccaccacct gctcgcgcat
    21061 ttcccgatag ctgaactggt aacgcgcatc tgccagcgcc ggagcatccg gtgtttttgc
    21121 cgcttgttct gccaccagcg cgctcagcgt ggtttctgga atctcaacct gagtggcgtt
    21181 gatctgcgcc agctgcgcat actcacctgg cagcataata tcgacatcgc cgcacaacag
    21241 cgccggatcc gcggcgaact gggcaatcag cattttcagg cgttcagcat gctggattaa
    21301 cgttggctca tcgtaacgct gtttattggc gaggatctca atactcaaat caccgtgttc
    21361 atccgggaac agggccagtt caaggtcatt aaccggaccg gttgccaagg tatgggtttg
    21421 cgcctgaaca ccaggaatat ccagttggta atcaaatacc ttgatattga gtaccggacc
    21481 aaacagcggt tcatcacctg ccgctcgccc gctgtcacgg acaatttgtt cggcatcgta
    21541 acgttgatga cgacgcattt ttttcagttg tgctgccagt cgggttgcca gttccggcag
    21601 cgtttcttgc gccgcaatgt gaatacccaa cggcaaaacg ttgagcacgg gtccggtagc
    21661 cgtcagcgcc gccgagccca gtcgacgcat aaagataaat ccagcggcgt agtccatgcg
    21721 attgcacaat cgccccagcc acaaagccgt cagcgcaagg gctaaatcgg tacgctgcac
    21781 acctgaaagt tgcgtagcca actggcggaa ttccccgtcg gtaaattcca ttttcagacg
    21841 taaaatatct gccgaagcgc tgcgccccgg taaaggtgcc ggagaaagtg acgcgggcgg
    21901 cggcagttga cgacgctgtt ctgcccagaa tgccgcatca cgctgccagg cttcgctttc
    21961 gcggtattgc tggtactctt ccactacatc agcgaaaggc gtaaacggcg aagcaggcgt
    22021 tggttcacca cgcagccatg tgcagtaaat attggcgatc tggcgggtaa tggccgggaa
    22081 actgaagcca tcgaccagca aatggtgata acgctgatac cagtaccagc ggttatccgc
    22141 cacctgtatc agctgatgaa agaccagtgg tttaccgcta tcgacgcgca gatcttgttg
    22201 caaatccgcc tgcattaatg cctgcgcagt accgtgcgga tcaatgttgg ttcgcaggtc
    22261 gataatttct ggcagttcga acgtcagcgc atcatcgacc cactgccaga cttcgccgtt
    22321 atcttccgta aaacgcatcc gcagcgtatc tgcttgcgct agtccgtcaa ccaccgcgcg
    22381 ggccagtaat ggcgcatcaa cctctccggt taactcaacg taatgcgcta cgctccaggc
    22441 ggagggtaaa tccgacagtt tttctgccat ccagatgccg ggctgtgcgg cgaccaaagg
    22501 taaatgctgg ctcattgcgc ctcctgcaac tgggtgaaat tcgccggtgt cagagtacgc
    22561 cagtgggctt caagccactg ctggcaggac tcttgtgact gcggctgaca cacaatgtcc
    22621 cagcctgccg gtaaggcgca ttgttgcggc cacagactga attgcccctg cgcattgcgc
    22681 aaaatgtaaa acgctccctg tggatcatcg aagggattac tgaatgccat attcaactcc
    22741 tgtcatggaa aagtggttgc cagaggtcga ttagcccctg catcaagcca ccgcgccaac
    22801 aaagcgcatc atgtccgccg tcaacctggc gccagaaaat ggattctttt atggggtgta
    22861 attgcgcata cagcgcctga ttggcccgca taatcatcgg ctcgcgaata cccgcttcca
    22921 gcacaatgcg cagaccttcg gcgctaactt caccagcttt aagcttttca agtaacacgc
    22981 cctcttgctg cccgccccga tgcggccacc agtacgatcc tgactggctt aatacacaac
    23041 caaaacgttc aggccagtgc agtccggcat acagcgcgga aagtccacca aaactctgcc
    23101 cggcaaccac ggtgcgatcg gcgcgatcgc taaaaggggc aatagctttc accaggggta
    23161 ataactcttg ctgtactgcg agccagaaat ccgcattaca cggcagttcg tgagcgcggt
    23221 gcgtggtgtc gatagcgtcg atcaacacat acacggcggg aggaagttgc tgacgatggg
    23281 tcagcgaagt cagcactggc cagacgggca tactttgcgc ccaaaattcg ccatcgagca
    23341 aaactgccag cgggcgttct tctgctgttg catcgccggt ggtaaaaatc catacacgac
    23401 gtgaattttt caaccgttca cttttccaga taatttcttt ggctggtatt tctggcgctt
    23461 gcggacaatc ccatcccggt tgcagaggcg cttgcggcat ttcgagtgca gaaacagcgt
    23521 gccctcgccc gcctttccag ctttgtggat tcagcggatc ggctattgcc tggggtaata
    23581 gttttcgcca gccttcacgt aattcgaggc gatcggggga tggtgcagaa aaaatgtcat
    23641 cgcgttcggt gggaataaag cagtagctgc cgcgccagtt ggcattgagt tgtgtcgtcc
    23701 actgccagac atcagtacct gcaatgcgct gcatcgactg gggctggctg ttctgatgat
    23761 gatcggtcac accagtgatg tagacccata cgcgctttat cggcgagtat tcttcagaac
    23821 cttggggatc acgccaccag aaagtgacct caaacatttc gtcattcaga cgctgccatt
    23881 ccgggccatg tttcgactgc caccagctct cacttcctac ttttaacgcc gtcacaccat
    23941 aaccccatgt ttactgtgca atttttcatt gattgcagaa atatattgat aatattattg
    24001 ataactattt gcatttgcaa tagcgtaatg gcgcgccgtg ggaagcgcgg acattaatta
    24061 accaactgca ctgcgtgtct ttcaggatca aaggttttcg cggtagcggg atgcgtcgtg
    24121 ttgaggacga ccatgcccga cagttgcaat tcgtggcaaa aatgcaggaa taaaacaatg
    24181 aacaagaaga ttcattccct ggccttgttg gtcaatctgg ggatttatgg ggtagcgcag
    24241 gcacaagagc cgaccgatac tcctgtttca catgacgata ccattgtcgt taccgccgcc
    24301 gagcagaact tgcaggcacc tggcgtttcg accatcaccg cagatgaaat ccgcaaaaac
    24361 ccggttgccc gcgatgtgtc ggagatcatc cgtaccatgc caggcgttaa cctgaccggt
    24421 aactccacca gtggtcagcg tgggaataac cgacagattg atattcgcgg tatgggtccg
    24481 gaaaacacgc tgattttaat tgacggcaaa ccggtcagca gccgtaactc ggtgcgtcag
    24541 ggctggcgtg gcgagcgcga tacccgtggt gatacttcct gggtgccgcc tgaaatgatt
    24601 gaacgtattg aagttctgcg tggtccggct gcagcgcgtt atggcaacgg cgcggcgggt
    24661 ggcgtagtta acatcattac caaaaaaggc agcggtgagt ggcacggttc ctgggacgct
    24721 tatttcaatg cgccagaaca taaagaggaa ggtgccacta aacgcaccaa cttcagtctg
    24781 accggcccgc tgggcgacga attcagcttc cgcttgtatg gcaacctcga caaaacccag
    24841 gctgacgcgt gggatatcaa ccagggccat cagtccgcgc gtgccggaac gtatgccacg
    24901 acgttaccag ccgggcgcga aggggtgatc aacaaagata ttaatggcgt ggtgcgctgg
    24961 gacttcgcgc ctctgcaatc actcgaactg gaagcgggtt acagccgcca gggtaacctg
    25021 tatgcgggca atacccagaa caccaactct gacgcttaca ctcgctcgaa atatggcgat
    25081 gaaaccaacc gcctgtatcg ccagaactac tcgctgacct ggaacggtgg ctgggataac
    25141 ggagtgacca ccagcaactg ggtgcagtat gaacacaccc gtaactcgcg tattccggaa
    25201 ggtctggcgg gcggtaccga agggaaattt aacgaaaaag cgacacagga tttcgtcgat
    25261 atcgatcttg atgacgtgat gctgcacagc gaagttaacc tgccgattga tttcctcgtt
    25321 aaccaaacgc tgacgctggg tacggagtgg aatcagcaac ggatgaagga cttgagttcc
    25381 aatacccagg cgctgaccgg ggcgaacacc ggcggcgcta ttgatggtgt gagtgccacc
    25441 gaccgtagcc cgtattcaaa agcagaaatt ttctcgctat ttgccgaaaa caacatggag
    25501 ctgactgaca gcaccatcgt aacgccgggg ctgcgtttcg atcatcacag tattgtcggc
    25561 aataactgga gcccggcgct gaacatatcg caaggtttag gcgatgactt cacgctgaaa
    25621 atgggcattg cccgcgccta taaagcgccg agcctgtacc agactaaccc gaactacatt
    25681 ctctacagta aaggtcaggg ctgctatgcc agcgcgggcg gctgctatct gcaaggtaac
    25741 gatgacctga aagcagaaac cagcatcaac aaagagattg gtctggagtt caaacgcgac
    25801 ggctggctgg cgggcgtcac ctggttccgt aacgattatc gcaataagat tgaagcgggc
    25861 tatgtggctg tagggcaaaa cgcagtcggc accgatctct atcagtggga taacgtgccg
    25921 aaagcagtgg ttgaaggtct ggaaggatcg ttaaacgtac cagttagcga aacggtgatg
    25981 tggaccaata acatcactta tatgctgaag agtgaaaaca aaaccacggg cgaccgtttg
    26041 tcgatcatcc cggagtacac gttgaactca acgctgagct ggcaggcgcg ggaagatttg
    26101 tcgatgcaaa cgaccttcac ctggtacggt aagcagcagc cgaaaaaata caactacaaa
    26161 ggtcagccag cggttggccc ggaaaccaaa gaaatcagtc cttacagcat tgtgggtctg
    26221 agcgcgacca gggatgtgac gaagaatgtc agtctgaccg gcggcgtgga caacctgttc
    26281 gacaaacgtt tgtggcgtgc gggtaatgcc cagaccacgg gcgatctggc aggggccaac
    26341 tatatcgcgg gtgccggggc gtatacctat aacgagccgg gacgtacgtg gtacatgagc
    26401 gtaaacactc acttctgatg ctaacgtcag attgttgata aagtgcgcgt cgttcatgcc
    26461 ggatgcggcg tgaacgcctt atccggccta caaaaatctt gccaattcaa tatattgcag
    26521 gaccatgtag gcctgataag cgtagcgcat caggcagttt agcgtttgtc accagtctct
    26581 aatatggtcg acatgaaaac tacgcatacc tccctcccct ttgccggaca tacgctgcat
    26641 tttgttgagt tcgatccggc gaatttttgt gagcaggatt tactctggct gccgcattac
    26701 gcgcaactac aacacgctgg acggaagcgc aaagccgaac atttagccgg gcggatcgct
    26761 gcaatttatg cgctgcggga atatggctat aaatgtgtgc ccgcaatcgg cgagctacgc
    26821 caaccggtgt ggcctgcgga ggtatacggc agtattagcc actgcggggc tacggcattg
    26881 gccgtggttt cccgtcaacc gattggcgtt gatatcgaag aaattttttc tgcgcaaaca
    26941 gcgaccgaat tgacagacaa cattattaca ccagcagaac acgagcgact cgcagactgc
    27001 ggtttagcct tttctctggc gctgacactg gcattttccg ccaaagagag cgcatttaag
    27061 gcaagtgaga tccaaactga tgcaggtttt ctggactatc agataattag ctggaataaa
    27121 cagcaggtca tcattcatcg tgagaatgag atgtttgctg tgcactggca gataaaagaa
    27181 aaaatagtca taactctgtg ccaacacgat taattgacaa catctggtac gattcgcccg
    27241 cagccatcac tgaccgcggg cgaaagtgta aagcaggtgc cttaccatcc tgacctgaca
    27301 accggatatg cggggattgc tccccgcaca acggctactt cttcggttcg taagcgagaa
    27361 cagccttaaa ctcaatatta cgttccttta cggtgaactc acacagcgaa tccccgacca
    27421 gaagcgtaaa tcccagcacc gttaaacaca gcactatgac tgccgcaagg gcatatttcg
    27481 tcagcatgtt tatattgcct ccatgcgaag aagggactac catccaaatt gttcaggttt
    27541 gggtaggtag ccccagggtt gatagaaata tcgtcctggg gcttcatctt tccagacctc
    27601 agagtaaacc tgaaaccgga aagcttcagg cacccgcagt tatcttaccc ttgcttagca
    27661 aaatagctgt ttatttatac agtaagtcct gtttcggact tctcactccc catttgatca
    27721 actgaagctg aacccgtttt tttctgcatg cctcaatcgt caaaattctt cgccacagtc
    27781 agcactgcca taacttgtca cattgcaaaa gtagccaaat tgcttctgtc ataatcagtt
    27841 caccatcacc aaaaaaaaga aacattccag aacttccgca tctcgcccag ccgctcccac
    27901 ttctatactg aatagaaaac gccaacataa gagaaaccta tgccattacc cgattttcat
    27961 gtttctgaac cttttacact cggtattgaa ctggaaatgc tggtggttaa tccgccgggc
    28021 tatgacttaa gccaggactc ttcaatactg attgacgcgg ttaaaaataa gatcacggcc
    28081 ggagaggtaa agcacgatat caccgaaagt atgctggagc tggcgacgga tgtttgccgt
    28141 gatatcaacc aggctgccgg gcaattttca gcgatgcaga aagtcgtatt gcaggcagcc
    28201 gcagaccatc atctggaaat ttgcggcggt ggcacacacc cgtttcagaa atggcagcga
    28261 caggaggtat gcgataacga gcgctatcaa cgaacgctgg aaaactttgg ttatctcatt
    28321 caacaggtga ccgtttttgg tcagcatgtt catgttggct gcgccagtgg cgatgacgcc
    28381 atttatttgc tgcacggcct gtcacggttt gtgccgcact tcatcgccct ttccgccgcg
    28441 tcgccatata tgcaaggaac ggatacgcgt tttgcctcct cacgaccgaa tattttttcc
    28501 gcctttcctg ataatggccc gatgccgtgg gtcagtaact ggcaacaatt tgaagccctg
    28561 tttcgctgtc tgagttacac cacgatgatc gacagcatta aagatctgca ctgggatatt
    28621 cgccccagtc ctcattttgg cacggtggag gttcgggtga tggatacccc gttaaccctt
    28681 agccacgcgg taaatatggc gggattaatt caggctaccg cccactggtt actgacagaa
    28741 cgcccgttca aacatcagga gaaagattac ctgctgtata aattcaaccg tttccaggcc
    28801 tgtcgctatg ggctggaagg cgtcattacc gatccgcaca ctggcgatcg tcgaccgcta
    28861 acggaagaca ccttgcgatt gctggaaaaa atcgcccctt ccgcacataa aattggtgca
    28921 tcgagcgcga ttgaggccct gcatcgccag gtcgtcagcg gtctgaatga agcgcagctg
    28981 atgcgcgatt tcgtcgccga tggtggctcg ctgattgggc tggtgaaaaa gcattgtgag
    29041 atctgggccg gtgactaagt agggaattgc cttacagaag aatatccctg acaatggtgt
    29101 tttaacttac atttaacaat gttatgaaac accctttaga aaccttgact accgcagcag
    29161 gcattttgct gatggctttc ctctcttgcc tgctgctgcc cgcccccgca ctggggctga
    29221 cgctggcaca aaaactggtg accatgttcc atctgatgga tcttagccag ctttacactt
    29281 tattgttttg tctgtggttt ttagtgctgg gcgctattga gtattttgtt ctgcgcttta
    29341 tctggcgacg ctggttctcg ctggcggatt aaacgtcgat tatcgccgta cttcgcggca
    29401 tactttgctt attctccttc gcctaaagga acgtttatgg ataagcaatc actgcacgaa
    29461 acggcgaaac gcctggccct tgagttaccc tttgtcgagc tttgctggcc ttttggcccg
    29521 gagttcgatg tttttaaaat tggcggcaaa atttttatgc tgtcgtcgga gctgcgcggc
    29581 gtccccttta tcaatctgaa gtccgatcca caaaaatccc tgttaaatca gcagatatac
    29641 ccgagcatta agccagggta tcacatgaat aaaaagcact ggatttcggt gtatcccggc
    29701 gaggaaatct ccgaagcgtt acttcgcgat ctgatcaacg attcgtggaa tctggtggtt
    29761 gatggtctgg ctaaacgcga tcaaaaaaga gtgcgtccag gctaaagcgg aaatctatag
    29821 cgcatttttc tcgcttacca tttctcgttg aaccttgtaa tctgctggca cgcaaaatta
    29881 ctttcacatg gagtctttat ggatatcatt tctgtcgcct taaagcgtca ttccactaag
    29941 gcatttgatg ccagtaaaaa acttaccccg gaacaggccg agcagatcaa aactctcctg
    30001 caatacagcc catccagcac caactcccag ccgtggcatt ttattgttgc cagcacggaa
    30061 gaaggtaaag cgcgtgttgc caaatccgct gccggtaatt atgtgttcaa cgaacgtaaa
    30121 atacttgatg cctcgcacgt cgtggtgttc tgtgcaaaaa ccgcgatgga cgatgcctgg
    30181 ctgaagctgg ttgttgacca ggaagatgct gatggccgct ttgccacgcc ggaagcgaaa
    30241 gccgcgaacg ataaaggtcg caagttcttc gctgatatgc accgtaaaga tctgcatgat
    30301 gatgcagagt ggatggcaaa acaggtttat ctcaacgtcg gtaacttcct gctcggcgtg
    30361 gcggctctgg gtctggacgc ggtacccatc gaaggttttg acgccgccat cctcgatgca
    30421 gaatttggtc tgaaagagaa aggctacacc agtctggtgg ttgttccggt aggtcatcac
    30481 agcgttgaag attttaacgc tacgctgcga aatctcgtct gccgcaaaac atcaccttaa
    30541 ccgaagtgta attctctctt gccgggcatc tgcccggcta tttcccctca gattctcctg
    30601 atttgcataa ccctgtttca gccgtcatca taggctgctg ttgtataaag gagacgttat
    30661 gcaggattta atatcccagg ttggggattt agcgggtatt gagatcgatc acaccacctc
    30721 gatggtgatg attttcggta ttatttttct gaccgccgtc gtggtgcata ttattttgca
    30781 ttgggtggta ctgcggacct tcgaaaaacg tgccatcgcc agttcacggc tttggttgca
    30841 aatcattacc cagaataaac tcttccaccg tttagctttt accctgcagg ggattatcgt
    30901 caatattcag gcggtattct ggctgcaaaa aggcaccgaa gcggcagata ttctgactac
    30961 ctgcgcgcag ttgtggatca tgatgtatgc gctgctttca gtcttctcgt tgctggatgt
    31021 tattttgaat ctggcgcaga aattcccggc ggcatctcag ttaccgctga aagggatatt
    31081 tcaggggatt aaactgatcg gcgcaatcct ggtcggcatt ttgatgatct cgctgctgat
    31141 tggtcagtcg ccagcgattc tgatcagcgg tcttggtgca atggctgccg tgctgatgtt
    31201 ggtatttaaa gatccgattc ttggtctggt ggcaggtatt cagctttccg cgaacgatat
    31261 gctgaaactg ggcgactggc tggagatgcc gaaatacggc gcggatggca cggtgatcga
    31321 tattgggtta accaccgtca aagtgcgtaa ctgggacaat accattacca ctattcccac
    31381 ctggtctctg gtttctgact cctttaaaaa ctggagcggg atgtcagcat ctggcgggcg
    31441 acgtattaag cgcagtatca gtattgatgt caccagtatt cgttttcttg atgaagacga
    31501 aatgcaacgt ctgaataaag cgcacttgtt aaaaccttat ttaaccagcc gccatcagga
    31561 aattaatgag tggaatcgcc agcaaggttc tacggagtcg atattaaacc tgcgccgaat
    31621 gaccaatatt ggaacctttc gtgcctatct gaacgaatat ctgcgtaacc atccgcggat
    31681 tcgtaaagat atgaccttaa tggtacgcca actggctcca ggtgataacg gtttaccgct
    31741 cgagatctac gcgtttacca acaccgtggt gtggctggaa tatgaaagca ttcaggctga
    31801 tatattcgat cacatatttg cgattgtcga agagtttggt ctgcgacttc atcagtcgcc
    31861 agccggcaat gatattcgct ctctggcggg tgcatttaag cagtaattaa aaaaaccgct
    31921 ctcatcgaat ggatgagagc ggacatcgtt ttgtcggatg tagcgtgaat gccttatttc
    31981 cgacgcagcg ttttaaatgc cacaaacagg aatacaatcc acaccggcag caggatcgct
    32041 gacaagcgca tatcatccat cgtgcacatc agcagcaaaa tcatgccgag gaaggcaatg
    32101 caaagatagt tgccgaacgg ataaagcagc gccttaaact gtgtttcacg tccctgacgt
    32161 cgcatcgccg cgcgaaaacg cagatgcgcc aggcagatca taatccagtt caacagcagc
    32221 gttgctacca ccagcgccat cagcagacca aacgcttttt gcggcagcag atagttgatt
    32281 aacaccacca gcgaagtgat cgctccggaa agcatcagcg agttaatcgg cacgccgcga
    32341 tggctgacgc gagtcaaaaa cttcggcgca ttaccctgca cagaaaggcc aaacagcatg
    32401 cggctgttag agtaaacccc gctgttatac actgacagcg atgctaccag aatgacgaag
    32461 ttcagcgcag aagctacctc gttgctgtcg agattatgga aaatcatcac aaacgggcta
    32521 ctgttggatt tcacttccac ccacggatag agcgccagta aaaccaccag tgaacagatg
    32581 taaaacagca ggatgcgata caccacctga tttaccgctt ttggaatgct tttttccgga
    32641 tcgcgcgctt cagcggcagt aatcccaatc agctccagac cgccgaagga gaacataatt
    32701 accgccagcg acaaaatcag cccattccag ccggtggcga agaaaccacc gtagcgccag
    32761 aggttgtcga tactggcttt ctcgccgccg tgaccagaaa acagcagcca caggccaaag
    32821 ccgatcatac cgatgattgc cagcacttta atcaacgcaa accagaactc ggtttcgcca
    32881 tataagcgca cgttcaccag gttaacggcg ttgatgataa taaagaaggc ggcagcccaa
    32941 atccacgttg gaacatccgg gaaccagtac tgcatataga tgcccgcagc ggtcagctct
    33001 gccattccca ccagcacgaa cattacccag tagttccagc cagagaggaa gcccgcaaac
    33061 ggtccccagt atttataggc aaagtgggca aatgaaccgg ataccggctc ttcgaccacc
    33121 atctcgccga gctggcgcat aatcaggaaa gcgatgatcc cggcgacgcc gtagcccagc
    33181 aatacagccg gacccgccat ctgaatcgcc gggccaatgc caagaaacag accagtacca
    33241 attgcgccac ccagcgcaat cagttgaata tgacggttat gtaatccgcg atgaagcgtc
    33301 ggctcttgat ttgacgcagt atcttccgat acggttgacg cgtttttcac gcctttcccc
    33361 tgtgtgtctt ttttgttgag gggcaccttt taacatttag tgcccatcgt cgcaagacac
    33421 aatccacacg gttaaacggg gtatcctgct tttatttccg tacccgatgt cggtgcagcc
    33481 acatcagctt atacgccgcc gggataataa acagcgacag caaaggcgcg gtgatcatgc
    33541 cgccaatcat cggtgcggca atccggctca tcacctctga accagccccc gttccccaca
    33601 gaatcggcag cagaccggcg ataatcaccg ccaccgtcat cgctttcggg cgcacgcgca
    33661 gtaccgcgcc gtgatacaac gcctcatcca gcttctgctc actgaatgtt tgcggattat
    33721 tcaacgacgg ctcggcctct atggcgtgac gtaaatacat cagcatcacc acgccaaatt
    33781 cggcggcgcc cccggcaagg gcaataaaac cggtgcccgt tgccacagaa agatgaaagc
    33841 ccatccacca cagcaaccag atgccgccca ccagcgcaaa cggtacgctg ctgataatca
    33901 gcaacgcttc gcccacccga cggaatgcca gatacaacag cacgaagatg atcatcagtg
    33961 tcatcggcac catgagtttc agcttatggt tggcgcgctc cagtagctcg aactgcccgg
    34021 agaatgccac gctggtgccc ggttttaact gcactttttc aactatcgct ttttgcaaat
    34081 cgtgaaccac cgacaccatg tcacgatcgc gggcatcgat ataaatccag ctcgtcgggc
    34141 gcgcattctc ggttttcagc atcgacggtc cggtagagac tttaacgtcg gccacgtctg
    34201 ccagggtgat ttgctgcttc atcggcgtca ggatcggtag ctggcgcagt gcctgcgggc
    34261 tatcgcgcca gctttgcgga taacgcagat taatgggata acgggcaatc ccttccaccg
    34321 tttcgccaac catcgccccg cccaccgcag aagtcacaaa caactgcaca tccgccaccg
    34381 tcataccgta acgcgcggct ttttcacggt taatctcaac gttgatatag cgcccacctt
    34441 ccagacgctc ggcaagcgca gaagccacgc ctggcaccgt tcgcgctact tcttcaattt
    34501 gctcagccat cgcgtcgata tccgccagca cagtgccgga aactttaatg ccgatggggc
    34561 ttttaatgcc ggttgagagc atatcgatac ggttacgaat tggcggcacc cacagattcg
    34621 ccagccccgg cagccgcacg gtgttatcca gttcctcaat gattttgtcc atcgtcatgc
    34681 caggccgcca ctgatcctgc ggcttaagct ggatggtcgt ttcaaccatc tcgagcggag
    34741 cagaatcggt ggcggtttcc gctttcccgg ttttgccaaa tacccgcgcc acttcaggta
    34801 cgctcataat tagcttgtcg tttttttgca gcatactcgc cgcctctgct gcggaaatcc
    34861 ccggcagcgt cgatggcata tacaacaagt cgccttcatt gatctgcggt aaaaattccc
    34921 cgccaacttt attgagcggc cagagaaccg tcagcaccga aagcgctgcc accaacagcg
    34981 tggttttcgg ccagtgcagt actttcagca atagaggatg ataaacacga atcaaaaagc
    35041 gattgagcgg gttactgctt tccggcggaa ttttgccacg gatccagtaa cccatcagga
    35101 tcgggatcac tacgatcgcc agcagcgccg cacccgccat cgcatacgtt ttggtgaacg
    35161 ccagcgggcc aaacagacgc ccttcttgcc cttccagggt gaagattggg ataaacgaca
    35221 gcgtgataat cagcagactg ataaacagcg ccggccccac ttcaacagat gcatcggtaa
    35281 tcacctgcca gcgcgtttta ttatccagcg tggcgtcagg atgctggtgc tgccactctt
    35341 ccagccgttt atgcgcattc tcgatcatga cgatagcagc atcgaccatc gccccgacgg
    35401 caatcgcaat gccacccaac gacataatat tggcattcag tccctggaag ggcatgacaa
    35461 taaaagcaat acacaacccc agcggcaacg aaataatcgc caccagcgcc gagcgcacat
    35521 gccagagaaa cagcgcacag actaccgcca ccacaataaa ctcttccagc aacttgccgc
    35581 tgaggttgtc gatggcgcgg tcaatgagct ggctgcgatc gtatgttgta actatctcca
    35641 cgccttccgg cagactactt ttcagcgttt ccagtttgtc cttcacggcg gcgatcactt
    35701 ctcgggcgtt tttgccggag cgcaggatca ccaccccgcc cgccacttcg ccttcgccgt
    35761 tcagttcggc aatgccccgg cgcatctccg ggccaacctg gaccttcgca acatcgcgca
    35821 gataaacggg cacgccattt tcactggctt ttaaaacgat gtgattaaag tcgtcgagcg
    35881 tttgcagata gccgctggcg cgcaccatat attccgcttc cgccagttcg atcgacgaac
    35941 cgcccgcttc ctggtttgaa gcatccagcg cgctttttac ttcggcgaga ctgatgccat
    36001 actgcgccag gcgctgggga tcgataacca cctgatactc tttcaccaca ccgcccaccg
    36061 acgccacttc cgcaacgtca gggatggttt tcagctcata tttgagaaac cagtcctgta
    36121 atgagcgtaa atcggccaga tcgtgcttac cgctgcgatc caccagtgca tattcataga
    36181 tccagccaac acccgtggca tctggcccca gctcggcgct gactcccgca ggcagcttac
    36241 cctgtacctg gttgaggtac tccagcaccc gcgaacgcgc ccagtacgga tcggtaccat
    36301 cttcgaaaat gacatacaca taagagtcgc caaactgcga gaaaccacgc acagtcttcg
    36361 cgccaggcac cgacaacatg gtggtggtta gcggataagt cacctgattt tcaacgattt
    36421 gcggtgcctg cccgggatag ctggttttaa taatcacctg cacatcggag agatccggca
    36481 gcgcatccac tggcgtatta atgatggtcc aggtgcccca gatgctaaga aacaacgcgc
    36541 ccatcagcac caaaaaacgg ttcgccaccg agcgacgaat aatccattca atcattggtt
    36601 attccctcaa tgcgcatggg tagcactttc agagcgcatc cgctccagtg cgccagaaat
    36661 attggcttcg gaatcaatca ggaaaaggcc gctggaaacc accttttcac cttccgccag
    36721 accagagcgt aatgcggtga caccttgcga tgcctggaaa acggcaacgc gtttcggtac
    36781 aaagcgcccg tcggcatcaa tggtaatcac ccgctgttcg ctaccggtat caatcagccc
    36841 ttgtgacgga atgagcagca tcggttcgct ggcggtattg agttgcaacc aggcgttcat
    36901 gcccggtttt agcgcctcgt cggcgttgtc gacttccaga cgcagctgca gcgtgcgggt
    36961 cgcggcatcc acgccgggta gcagcgtcca tttgcggatg gtgagtgttt tatccggtcg
    37021 tgccggaacg gtgagcgtaa actgcgaggc atctttcacc agccaagcga tagactccgg
    37081 gatcgcagca gtgacccaca ccgggtccat accctgaatt ttcgctacca cgttatcttt
    37141 ggcgatattc attcccgcgc gcagatcaaa cgcggtgatc acgccatcaa tgggcgcttt
    37201 gagcgtaaag cgagtctgga ttttttgcgt ggcgatcagg cggcgaatat ccgcctccgg
    37261 cattcccgcc agtcgcagcc gctcaagaat gccttcagtc tgggtcgccg taccgccggt
    37321 ttcgcgcagc agtaaatact cactctgcgc ttccacccag tcaggaatgg tcaggtcgag
    37381 aagcggtgtg cccttttgta ctttatcgcc cacggtaagc ggatacacct tgtcgataaa
    37441 cccggcagcg cgagcctgca caatggcata ctgatactcg ttgtaactga cattcgccgg
    37501 gaaactctgg gcaaaagtca gcggtccgcg cgtgacggta gccgttttca cccccagat
//
LOCUS       DAJVUK010000019        37319 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.019, whole genome shotgun sequence.
ACCESSION   DAJVUK010000019 DAJVUK010000000
VERSION     DAJVUK010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37319
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.019"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..808)
                     /locus_tag="OQQ57_000940"
     CDS             complement(<1..808)
                     /locus_tag="OQQ57_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001019361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HCS1955781.1"
                     /translation="MTIEKSRFSSGAAPQPNVNTGVINGNDFAAIVPVIAGRIGGREA
                     NIVSAKALHKALGVGRDFTNWIKGRIDQYGFIAGTDFIRVENLSTPKRASAKTRQQIE
                     HDYLLSLDMAKEVAMVERNEQGRAIRRYFIQCEEELQRSVPEIAARYRRQLKARLSAA
                     NNFKPMCDALNMARAEMGKTTQQRHYSNESNMIARIVLGGMTAKQWAQANGITGEPRD
                     SMNAAQLEHLAYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEVNHA"
     gene            complement(822..1253)
                     /locus_tag="OQQ57_000941"
     CDS             complement(822..1253)
                     /locus_tag="OQQ57_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001437021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955782.1"
                     /translation="MEKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYASELERRLDIQLERIDEKNPDGIGSHLRYRFTGR
                     GDVLKVIRLVNHNADAGGYQGLSQPEIADILNLYPDNLTAA"
     gene            complement(1253..1456)
                     /locus_tag="OQQ57_000942"
     CDS             complement(1253..1456)
                     /locus_tag="OQQ57_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HCS1955783.1"
                     /translation="MNIDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLG
                     EKITAFDAVEIHNWLAERRGKVA"
     gene            complement(1569..2417)
                     /locus_tag="OQQ57_000943"
     CDS             complement(1569..2417)
                     /locus_tag="OQQ57_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955784.1"
                     /translation="MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGY
                     DGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVLGLWHV
                     NASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYIT
                     RPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYV
                     KRHYPEECKGKNGKETNEAWANATINHWALLGGGYDEPSIDYLKKLIADADRTPEERT
                     TAGKKR"
     gene            complement(2513..3772)
                     /locus_tag="OQQ57_000944"
     CDS             complement(2513..3772)
                     /locus_tag="OQQ57_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1955785.1"
                     /translation="MPKLTDMQIRAWIKSGERFEGRADGNGLYLRYREADKTPTWRFR
                     YKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGEKQKRKTEALAKMEAE
                     KNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKVEDVKPRHIDDMLK
                     GIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGKEAARDRWLTRD
                     ELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERS
                     KNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVR
                     AEMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKA
                     ALAQWADLLVALESGKDYNVTPLRRAN"
     gene            complement(3963..4826)
                     /locus_tag="OQQ57_000945"
     CDS             complement(3963..4826)
                     /locus_tag="OQQ57_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HCS1955786.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDISAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            4953..5669
                     /gene="rph"
                     /locus_tag="OQQ57_000946"
     CDS             4953..5669
                     /gene="rph"
                     /locus_tag="OQQ57_000946"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HCS1955787.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            5735..6376
                     /gene="pyrE"
                     /locus_tag="OQQ57_000947"
     CDS             5735..6376
                     /gene="pyrE"
                     /locus_tag="OQQ57_000947"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HCS1955788.1"
                     /translation="MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
     gene            complement(6413..7009)
                     /gene="slmA"
                     /locus_tag="OQQ57_000948"
     CDS             complement(6413..7009)
                     /gene="slmA"
                     /locus_tag="OQQ57_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HCS1955789.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(7116..7574)
                     /gene="dut"
                     /locus_tag="OQQ57_000949"
     CDS             complement(7116..7574)
                     /gene="dut"
                     /locus_tag="OQQ57_000949"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HCS1955790.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            complement(7552..8772)
                     /gene="coaBC"
                     /locus_tag="OQQ57_000950"
     CDS             complement(7552..8772)
                     /gene="coaBC"
                     /locus_tag="OQQ57_000950"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HCS1955791.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEGLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
                     EEYARQKRIRKNLDLICANDVSQPTQGFNSENNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            8944..9612
                     /gene="radC"
                     /locus_tag="OQQ57_000951"
     CDS             8944..9612
                     /gene="radC"
                     /locus_tag="OQQ57_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HCS1955792.1"
                     /translation="MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTL
                     AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
                     SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
                     KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE
                     RGWI"
     gene            9829..10065
                     /gene="rpmB"
                     /locus_tag="OQQ57_000952"
     CDS             9829..10065
                     /gene="rpmB"
                     /locus_tag="OQQ57_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HCS1955793.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARSEKY"
     gene            10086..10253
                     /gene="rpmG"
                     /locus_tag="OQQ57_000953"
     CDS             10086..10253
                     /gene="rpmG"
                     /locus_tag="OQQ57_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCS1955794.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            10351..11160
                     /gene="mutM"
                     /locus_tag="OQQ57_000954"
     CDS             10351..11160
                     /gene="mutM"
                     /locus_tag="OQQ57_000954"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HCS1955795.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(11199..11678)
                     /gene="coaD"
                     /locus_tag="OQQ57_000955"
     CDS             complement(11199..11678)
                     /gene="coaD"
                     /locus_tag="OQQ57_000955"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HCS1955796.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(11686..12963)
                     /gene="waaA"
                     /locus_tag="OQQ57_000956"
     CDS             complement(11686..12963)
                     /gene="waaA"
                     /locus_tag="OQQ57_000956"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HCS1955797.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQVLLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            13376..14434
                     /gene="rfaQ"
                     /locus_tag="OQQ57_000957"
     CDS             13376..14434
                     /gene="rfaQ"
                     /locus_tag="OQQ57_000957"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HCS1955798.1"
                     /translation="MDKLFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLRVDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            14431..15555
                     /locus_tag="OQQ57_000958"
     CDS             14431..15555
                     /locus_tag="OQQ57_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCS1955799.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     YPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
     gene            15548..16345
                     /gene="rfaP"
                     /locus_tag="OQQ57_000959"
     CDS             15548..16345
                     /gene="rfaP"
                     /locus_tag="OQQ57_000959"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HCS1955800.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWSAIHRLRDVGVDTMYGVAFGEKGI
                     NPLSRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            16361..17377
                     /gene="waaO"
                     /locus_tag="OQQ57_000960"
                     /gene_synonym="rfaI"
     CDS             16361..17377
                     /gene="waaO"
                     /locus_tag="OQQ57_000960"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HCS1955801.1"
                     /translation="MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGC
                     GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
                     TTKNWSIAMYFRFVIADYFIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTER
                     DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRFTY
                     MDQDILNLILLGKVKFIDAKYNTQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYW
                     AGYPSAQPFIKAKEASPWKNEPLMRPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYL
                     KIIK"
     gene            17394..18389
                     /locus_tag="OQQ57_000961"
     CDS             17394..18389
                     /locus_tag="OQQ57_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase"
                     /protein_id="HCS1955802.1"
                     /translation="MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSV
                     LINNSDINFVFHVFTDYVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSY
                     ATYFRVLSFEYLSESISTLLYLDADVVCKGSLKPLTEIIFKDEFAAVIPDNDSTQAAC
                     AKRLNIPEMNGRYFNAGVIYVNLKKWHEANLTPYLLKLLRGETKYGSLKYLDQDALNI
                     AFNMNNIYLAKDFDTIYTLKNELYDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYP
                     SASYFNIAREQSPWKKYPLKEARTVAEMQKQYKHLFAHGEYIKGITSLIKYKLKK"
     gene            18399..19091
                     /gene="rfaY"
                     /locus_tag="OQQ57_000962"
     CDS             18399..19091
                     /gene="rfaY"
                     /locus_tag="OQQ57_000962"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HCS1955803.1"
                     /translation="MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLCNIDD
                     TKVSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPND
                     FYFLAERKIFNYASVFIMLIEYVEGVELNDMPIIPENVKAEIKASMEKLHALNMLSGD
                     PHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTK
                     LRKFIKKLKGKA"
     gene            19117..20142
                     /locus_tag="OQQ57_000963"
     CDS             19117..20142
                     /locus_tag="OQQ57_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactose--(galactosyl) LPS
                     alpha1,2-galactosyltransferase"
                     /protein_id="HCS1955804.1"
                     /translation="MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
                     VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQW
                     SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQ
                     EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
                     LNILFFGHCNFISGDYDCFYGIDYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
                     NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNK
                     YKRKLFG"
     gene            20227..21210
                     /locus_tag="OQQ57_000964"
     CDS             20227..21210
                     /locus_tag="OQQ57_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCS1955805.1"
                     /translation="MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDG
                     SKDNTSNVLREYGLTHSRLIIVNKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNY
                     LLKMYTRQHETGGDAIYCGLYGHYIKDGVTYSPINTEFNEGSLLFDFFYKKVRFHIGC
                     LFIRKQLLEENNLFFDEDLRLGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSC
                     RTITHYRHESFAHERIYSSVMQLYKGNRKEEIHTLLSQNRAYHKTRYLWNVLLNGDFK
                     LLNQLVESNEKELRYCNLPGKRDKRRAKILASKNYILWRMVRLVNRKKNKR"
     gene            21256..22509
                     /locus_tag="OQQ57_000965"
     CDS             21256..22509
                     /locus_tag="OQQ57_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012311869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HCS1955806.1"
                     /translation="MSFCWNEINSGIKSLILILCIFSLMTLSLWDDVATKFLHAAGII
                     SALYFLATPKKTITNNPTLLIFISLCLLGIVNIIWYSHYKVSGSVYTNAYRGPMETGK
                     IALCSAFIFLVLFAKNEMRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALS
                     ASHATTAGYIILFPSLLASILILKSDFRHKTTLYTINFMLSLCAVIVTETRAAILVFP
                     FFALILIVMDSYINKRINYKLYCFIAIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN
                     TRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSGALPFVDSHLHNDL
                     IDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLFSLLVVGLSDVILFSKPVP
                     TAVFVTIILLCAYFKAQSDQYLLDK"
     gene            complement(22579..23559)
                     /gene="rfaC"
                     /locus_tag="OQQ57_000966"
     CDS             complement(22579..23559)
                     /gene="rfaC"
                     /locus_tag="OQQ57_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HCS1955807.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGLDWQTAREPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFDYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAENAAMI"
     gene            complement(23563..24609)
                     /gene="rfaF"
                     /locus_tag="OQQ57_000967"
     CDS             complement(23563..24609)
                     /gene="rfaF"
                     /locus_tag="OQQ57_000967"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HCS1955808.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
                     VLEELNTLLLQEEA"
     gene            complement(24619..25551)
                     /gene="rfaD"
                     /locus_tag="OQQ57_000968"
     CDS             complement(24619..25551)
                     /gene="rfaD"
                     /locus_tag="OQQ57_000968"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HCS1955809.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LDIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            25765..26961
                     /gene="kbl"
                     /locus_tag="OQQ57_000969"
     CDS             25765..26961
                     /gene="kbl"
                     /locus_tag="OQQ57_000969"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HCS1955810.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            26971..27996
                     /gene="tdh"
                     /locus_tag="OQQ57_000970"
     CDS             26971..27996
                     /gene="tdh"
                     /locus_tag="OQQ57_000970"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HCS1955811.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            28235..29269
                     /gene="waaH"
                     /locus_tag="OQQ57_000971"
                     /pseudo
     CDS             28235..29269
                     /gene="waaH"
                     /locus_tag="OQQ57_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
     gene            complement(29256..30215)
                     /locus_tag="OQQ57_000972"
     CDS             complement(29256..30215)
                     /locus_tag="OQQ57_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HCS1955812.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
     gene            complement(30219..31502)
                     /gene="envC"
                     /locus_tag="OQQ57_000973"
     CDS             complement(30219..31502)
                     /gene="envC"
                     /locus_tag="OQQ57_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HCS1955813.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQCGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            complement(31512..33056)
                     /gene="gpmM"
                     /locus_tag="OQQ57_000974"
                     /gene_synonym="pgmI"
     CDS             complement(31512..33056)
                     /gene="gpmM"
                     /locus_tag="OQQ57_000974"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HCS1955814.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            33301..33732
                     /locus_tag="OQQ57_000975"
     CDS             33301..33732
                     /locus_tag="OQQ57_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HCS1955815.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            33874..34125
                     /gene="grxC"
                     /locus_tag="OQQ57_000976"
     CDS             33874..34125
                     /gene="grxC"
                     /locus_tag="OQQ57_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HCS1955816.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            34188..34655
                     /gene="secB"
                     /locus_tag="OQQ57_000977"
     CDS             34188..34655
                     /gene="secB"
                     /locus_tag="OQQ57_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015369180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HCS1955817.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            34655..35674
                     /gene="gpsA"
                     /locus_tag="OQQ57_000978"
     CDS             34655..35674
                     /gene="gpsA"
                     /locus_tag="OQQ57_000978"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HCS1955818.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMCPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGAEPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            35754..36575
                     /gene="cysE"
                     /locus_tag="OQQ57_000979"
     CDS             35754..36575
                     /gene="cysE"
                     /locus_tag="OQQ57_000979"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HCS1955819.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(36628..37101)
                     /gene="trmL"
                     /locus_tag="OQQ57_000980"
     CDS             complement(36628..37101)
                     /gene="trmL"
                     /locus_tag="OQQ57_000980"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HCS1955820.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
BASE COUNT         9248 a         8882 c         9297 g         9892 t
ORIGIN      
        1 acgcatggtt tacctccaga cgtttagcga gccagcgttg cgacaggcgg gtgagttctc
       61 ctttgcgctg ctcatattcc atgcccatat caattaacgt gatattggtg ctttcgagat
      121 aggcgaggtg ttcaagctgt gctgcgttca tgctgtcccg tggttcgcca gtaatgccat
      181 ttgcctgcgc ccactgcttc gccgtcatgc cacccagcac gatacgggcg atcatgttgc
      241 tctcgttgct gtagtggcgc tgctgcgtcg ttttgcccat ctcggcacgg gccatattca
      301 gcgcatcgca cattggctta aagttgtttg cggcactgag acgggctttt agctggcgac
      361 gatagcgggc ggcgatttca ggcacgctac gctgtaattc ttcctcgcac tggatgaaat
      421 aacggcggat agcgcggccc tgctcgttgc gttcaaccat tgccacttct ttagccatat
      481 ccagcgatag caggtaatca tgctctattt gctggcgagt ttttgcgctc gcccgttttg
      541 gcgtgctcaa attttcaaca cggataaaat cggttccggc aataaaaccg tactggtcaa
      601 ttcggccttt aatccagtta gtaaagtcgc ggcccacccc cagcgcttta tgcaacgcct
      661 tagcgctcac aatattggct tcacgcccgc caatgcgtcc ggcaataacg ggaacaatag
      721 cggcaaagtc gttgccgtta attactcccg tgttaacgtt gggttgcggg gcggcccccg
      781 aactgaatcg gcttttttcg atagtcatat tttcggctcc gttatgcggc ggtgagattg
      841 tccgggtata gattgagaat gtcggcaatt tcaggctgag aaagtccctg atagccgcca
      901 gcgtcggcgt tatggttcac aagccgaata acttttagaa cgtcaccgcg cccggtaaag
      961 cgatagcgta aatgtgaccc tatcccgtcg gggttctttt cgtctatacg ctcaagctga
     1021 atatcaagcc tgcgctctaa ctcgctggcg tagttccttc cagacgaaag gcggcaataa
     1081 cgcagaatgt cattttctgt ccatccctct ataccagtac gcagcatata gactctggca
     1141 cgatgctttt tcggtgtgcg ctttggtgct tgaagggatt ttgtaagggg cgtaacatca
     1201 gatacgcgaa tatctgaatt agccgcctgt aatgggcggt ttttcttttc catcaggcca
     1261 ccttcccgcg gcgttctgcc agccagttgt gaatctcaac cgcatcaaac gcagttattt
     1321 tttctcccag ctttaccgga cgtggtagtg aaccgtttct tactttacgg tcgatggtgg
     1381 atacactaac gcccagcaat tcagccaggc ggaagcgtct gatatagcct tttgtaggga
     1441 tagtgtcgat gttcatgatt cccgtaacct cttagcgata gttgttgctt cgttacgggt
     1501 atttaatggc gtgcacgctc aaaaaggaat gatcgtattt tttactatcg tgatagtaaa
     1561 atttactatc accttttttt ccctgccgtg gtgcgttctt ccggtgttct gtctgcgtcg
     1621 gctatgagtt tcttcaggta atctatggat ggctcatcat agccgccccc caaaagcgcc
     1681 cagtggttta ttgtggcgtt cgcccatgct tcgttggttt ccttcccgtt cttcccttta
     1741 cactcttctg ggtagtgccg cttcacataa atcaacgcca agaggcaaat ttcgcgcttt
     1801 tgcctgtggc gctctctgtt tccgtgctca acgtttttaa catcctcata aagagcttgt
     1861 aagtttatgc gagtttcggg gctgtatatg ggctggtttt tgtccatgca ttcgccgata
     1921 tattcaaccc acggccttgt tatgtacaaa tcctctacgg atatttcgtg gaaggcatgt
     1981 tttgtataat cgagaaaaaa ataataattc gcacttacgt ctagttctct ttttctgtgt
     2041 gcggggctga atatgcgtgc gggagtgtca atagaatcaa gccctgcgat gtcgagtata
     2101 taggaggcgt taacatgcca tagcccaagc acatggcaat ctatatgatt tacaacgcct
     2161 gccttaaagc ttttttcgtc ctctacttca gtgattatgt cggcaagtaa taagcagtct
     2221 tctttgacgt ctgggaataa agagcaattg cggtaaagac tcgcgatgct atgtaatgtg
     2281 ccgtcgtagc cgcaaaggta cgcgctcaaa tatatagatt ctgccgccgc cataatcaaa
     2341 agatcatcaa tatctatttc taataattcg gctgctctgt taagcctgaa aaaaggggcg
     2401 ggtggtaatt ttttcattgt gtcacctttt acgctgcgcc ttattttgtg attgagccag
     2461 gcggtaaggc ttcccgcttt tcgccccgtc gagctaggct caatctattc agttagttcg
     2521 cccttctgag aggcgttacg ttgtagtctt ttccgctttc cagtgccacc agcagatcag
     2581 cccactgtgc cagtgctgct ttacgctcat caaaatactg atggcggtta taaatcccct
     2641 ctacgccctt aatgcgatga ttgaggcatc gttccgccac aacaggatca acacccaacg
     2701 ctgctaaatg agtacgtgcg gtgcgtcgaa agtcgtgaat cgtgaaatta ggcacatccg
     2761 gcatttcggc gcgaacctta gccagtgcta cgggtaaagt gctttcctga atatgtggga
     2821 tcattctgtt ttgcatcttc ctggccggaa gcacccatgc gctattacat gaaaaggtgt
     2881 gtagctctct caaccattca acggctgggg aaggtagagg tatatcaata gggtctccgt
     2941 ttttgctgcg ttcttccggc aaatgccata ccgcaccatc taaatcaaac tcttcccatc
     3001 gtgcggcgca taattccatt ttgcggacgc ataacgctaa cagtaatttg aacgtgattt
     3061 cgttctggcg actgaatccc ttagccgtgc gcatggcttt gaatagctgg attaactcat
     3121 cgcgggttaa ccagcggtca cgggcagctt ctttccctcc ggcgtctgcc acctcaaagg
     3181 ctgaacaggg gttaatctct agcgcgtgcc gtttgattcc gtagtcgaat atgcggcgcg
     3241 tccatctcag cacgtccgtt gctatggtcg gcgctccacg gtcaacaata cctttcagca
     3301 tgtcatcgat atggcgcggt ttcacgtcct ctaccttcat gctgccaatg caggggttta
     3361 tatctttgtc gatacggcgg cggagtatat cggggtgctt ccagcgcggg aggatctgac
     3421 gctcaaagta ttcagcggca agctctgaaa cgcgcatagc gttcttctct gcttccatct
     3481 tcgccagtgc ttcggttttg cgcttctgct tctctcctgc aacgtcatag cccagcgcaa
     3541 cgcgagccga tagctctttg gctgtctctc tggcctttga tagtgatagc tcgctatacg
     3601 aaccaattag catggcgcgg gacttccctg cgagtttata gcggaatctc catgtggggg
     3661 ttttgtcggc ttcacggtaa cgtaggtata aaccgttacc gtctgcccgc ccctcgaatc
     3721 gctctccgct cttaatccat gcgcggatct gcatgtctgt tagttttggc attttgcgaa
     3781 tatccaaact ttgaataggg ggtgtaccca aagcaatgta cccaaacctc attgggtaca
     3841 cctttgtgta caccataatc atgcgctttg ttgcgtcttt atgatagccc atgataacaa
     3901 aaaagcccgc tgggttgcgg gcttggtgtg atttatgcgt tgtcctaaat gttgctgata
     3961 gcttactcga tattctgaat ctgctcgcgc atctgctcaa tcaacacttt cagctcaatc
     4021 gcggagtttg tcacttcggc attgatagac ttcgacgcaa gagtgttcga ctcgcggttg
     4081 aattcctgca tcataaagtc cagacgacga ccaacggctt cttttttctt cagaatgttg
     4141 taggtctctt tgacatgcgc ttccaggcgg tccagttctt cggcaacgtc aattcgttgt
     4201 gccagcagaa ccagctcctg ctccagacgg ttgttttcca actgaacctg agcatcttcc
     4261 agcttcgcga ccagacgctc acgctgccat tgcaggattt ccggcatatg ggcgcggact
     4321 ttgaccactt cggcggtgac gccttccaga cgctgctcga tcaatgcttt cagtgcctga
     4381 ccttcggttt cgcgcgcgac aataaagtcg tccagcgtac catccagcgc cgcgagaatt
     4441 tcagcggcaa tggcgtcaag atcctgctcc tgggctgcca tcacgcccgg ccagcgtaga
     4501 atatcaaccg ggttgatttc cccttcgtca ctctgcattt ttacccagtt cgcggcagtt
     4561 accagctgtt tagccagttt ttcgttgagg atcagctcac cttgcgcgct aatatctggc
     4621 tcatagcgca gggtacattc cactttaccg cgcgtcaggc gagaacgaat acgctcgcga
     4681 acgacaggtt caaggctacg gaactgctcc ggcagacgaa agtaagtttc cagataacgc
     4741 tggtttaccg agcgcatttc ccaggttgcg ctcccccatt cacccttgat ttcacgccgg
     4801 gcgtaggcgg tcatactgcg gatcatagac gttcctgttt ataaaaggag aggtggaagg
     4861 attatagcca tcgatgcctt gtcaggatag gaataaccgc cggaagtccg tataatgcgc
     4921 agccacattt gtttcaagcc ggagatttca atatgcgtcc agcaggccgt agcaataatc
     4981 aggtgcgtcc cgttaccctg actcgtaact atacaaaaca tgcagaaggc tcggtgctgg
     5041 tcgaatttgg cgataccaaa gtgttgtgta ccgcctctat tgaagaaggc gtgccgcgct
     5101 tcctgaaagg tcagggccag ggctggatca ccgcagagta cggcatgctg ccacgttcta
     5161 cccacacccg taacgctcgt gaagcggcga aaggtaagca gggtggacgc acaatggaaa
     5221 tccagcgtct gatcgcccgt gctcttcgcg cggcagtaga tttgaaagcg ctgggtgagt
     5281 tcaccattac gctggactgc gacgtgcttc aggctgatgg tggcacgcgt accgcgtcga
     5341 ttacgggtgc ctgcgtggcg ctggcagatg cgctacagaa gctggtggaa aacggcaagc
     5401 tgaaaaccaa cccgatgaaa gggatggtag ccgcagtttc tgtcggaatt gtgaacggcg
     5461 aagcggtttg cgatctggaa tacgttgaag actctgccgc agagaccgac atgaacgtag
     5521 tgatgaccga agacgggcgc atcattgaag tgcaggggac ggcagaaggc gagccgttca
     5581 cccatgaaga gctactcacc ttgttggctc tggcccgagg gggaatcgaa tccattgtag
     5641 cgacgcagaa ggcggcgctg gcaaactgat ttttaaggcg actgatgagt cgcctttttt
     5701 ttgtctgtag aaaagtaaga tgaggagcga aggcatgaaa ccatatcagc gccagtttat
     5761 tgaatttgcg cttggcaagc aggtgttaaa gtttggcgag tttacgttga agtccgggcg
     5821 caaaagcccc tatttcttca acgccgggct gtttaatacc gggcgcgatc tggcactgtt
     5881 aggccgtttt tacgctgaag cgttggtgga ttccggcctt gagttcgatc tgctgtttgg
     5941 ccctgcttac aaagggatcc cgattgccac cactaccgcc gtggcgctgg cggagcatca
     6001 tgaccttgac ctgccgtact gctttaaccg caaagaggca aaagaccacg gtgaaggcgg
     6061 caatctggtt ggtagcgcgt tacaaggacg cgtaatgctg gtagatgatg tgatcaccgc
     6121 cggaacggcg attcgcgaat cgatggagat tattcaggct aatggcgcga cgcttgctgg
     6181 cgtgttgatt tcgcttgatc gtcaggaacg ggggcgcggc gagatttcgg cgattcagga
     6241 agttgagcgt gattacaact gcaaagtgat ctctatcatc accctgaaag acctgattgc
     6301 ttacctggaa gagaagccgg aaatggcgga acatctggcg gcggttaagg cctatcgcga
     6361 agagtttggc gtttaaagaa actcgccgga tgaaaagtca tccggcgtca tattactgca
     6421 actgtgccgc aattagcggc cagcgggcgt caaaatcatc cgtcgggcgg tatttaaatt
     6481 cgctgcggac aaaacgtgac agcatacctt cacagaaggc caggatctgg cttgccagca
     6541 gggtttcatc ggtggtgtaa ccttcaccct cacgcattct cttttcacgc aatacctgac
     6601 gcagctgcgc ttcaatacgc tcgaacagct ggttgatgcg cccttgcagg cgatcctgtt
     6661 caaacattag cgcatgacca gtgaggatgc gggtcaggcc aggattacgc tcaccaaaac
     6721 cgagaagcag caacacaatc agacgcaggc gcgctgtggt gtctttctca tctttcagaa
     6781 tcaggttgat gcgagtaatc aggctatctt cgataaactc aatcaggcta tcgaacatgc
     6841 gggtcttact ggggaagtgg cgatacagtg ccgcttcgga aacgccgaca gaggcggcca
     6901 gttttgccgt cgtgatacgt tggcttccat cgctggattc cagcatcagc gccagagact
     6961 gaagtatttc ctcgcgacgg ttccttttcg cagtttgttt ttctgccatg ttacaaaata
     7021 cccctgaaaa taagcacttg ccaggcggca cccacgctat gaccgcaaac gaaatgtttg
     7081 cggctatgtt atgacgttat tcggatgcgt atgtgttact gacgaccaga gtgaccaaag
     7141 ccgccttcac cgcggtcggt ggcgtcgaaa tcttccacca gattaaattc agcctgtact
     7201 accggaacaa aaatcatctg ggcgatgcgt tcgccaggtt gaatggtaaa gctgtcctga
     7261 ccacggttcc acacggaaat catcaactgg ccctgatagt cggaatcgat caatcctacc
     7321 aggttaccaa gcacgatacc gtgcttatgt cccaatccgg agcgcggcag catcattgcc
     7381 gccagtgaag gatcggcaat atgaatcgcc agcccggtcg gaaccagcgt agtgtcaccc
     7441 ggagccagtt ctacggcgtc gtcgagacag gcacgcaggt caagtccggc agagccagag
     7501 gtggcataag tcgggagcgg aaattccttc ccaacgcgcg ggtccagaat cttaacgtcg
     7561 atttttttca tcataacggg tcacgatctc gtcgagtaat agttggccaa ggagctcttt
     7621 gcgctcaagc ggtaagactt tatctccgtc ctgccagaaa aggtgtaatg cgttgttttc
     7681 gctgttaaat ccttgagttg gctgggaaac atcgttcgcg cagatcagat caaggttttt
     7741 acggatacgt ttttgccggg cgtattcttc cacattattt gtttcggcgg caaatccaac
     7801 gacgtagggt cgatggtctt ttagtgcggc aacgcctgcg acgatatcgg ggtttttaac
     7861 catttttatt gttaattcat caccctgcgt ggcctgcttt ttgatttttt ctggggccac
     7921 ggtagctgcg cgataatccg ccacggcggc gcagccgata aaaatatttt gctgctgtac
     7981 agaagcattc acggcggctt ccatttccag cgcggtcatc acatcaacac gtttaacaaa
     8041 cggtggcgtc ggtagtgaaa ccggacctga taccagcgtg acgttcgcgc cacgacgggc
     8101 agcggcggcg gcgatagcaa aacccatctt gccggagctg tgattagaga tataacgcac
     8161 gggatcgagc ggttcacgcg tcggaccggc ggtaatcata atgttcagat gtttcaggtc
     8221 gttgacgggc gaaaaatgcg ccaccgccat atccacaatg gttaacggat cgagcattcg
     8281 cccaggaccg atatcaccac aagcctgact gccactgtct ggcccccaga tgagcaaacc
     8341 acgggaagca agcccctcta aattatgctg cgtggcagcg gcacggtaca tctgctggtt
     8401 catggcgggg agcacggcta caggcgcagg tgtagccaga caaatcgtcg ataccaggtc
     8461 attcgccatt ccggcagcaa cacgggcaat caaatctgcc gtggcagggg cgagaatcac
     8521 taaatcagcc catttaccca gctcaatatg gcccatagcg gcttcggctg ccgggtccag
     8581 caaactgtcg gaaacgggat aaccagaaac cgcctgcaag ctaagtgggg tgataaaggc
     8641 ttttgccgct tcggtcatgg ctacgcggac gtcggccccg cgatcgcgca aacgacgcac
     8701 cagttcaggg gttttatagg cagcaatacc gccgctaacg ccgagaacga tttttttacc
     8761 ggccaggctc atgatgattt ttcctgttgg gtgacaccag aagttggcga ttttatcaca
     8821 atacttttgt tgtcgtgcct tcacctgaga atcactttgc gaggcgcttt ccaggattga
     8881 aaactggccg tcgatttaac ggaacggcta tgacaggatg cgagcaccac aaaggaggtg
     8941 aaggtgaaaa acaattcaca gctgttgatg ccgcgcgaaa aaatgctgaa gtttggtatt
     9001 agcgccttaa cggatgtcga gctgctggcg ctatttctgc gtaccggaac gcgcggtaaa
     9061 gatgtattaa ccctggcaaa agagatgctg gagaatttcg gctctcttta tggcttgtta
     9121 acctctgaat atgaacaatt tagtggcgtt catggaattg gcgtggcgaa atttgcccag
     9181 ttaaagggga ttgctgaact ggcgcggcgt tactacaacg tgcggatgcg tgaagaaagc
     9241 cctttactca gcccggagat gacgcgggaa tttttacaaa gccagcttac gggtgaggag
     9301 cgggagatct ttatggtgat ctttctcgac tcacaacacc gggttataac gcatagccgt
     9361 cttttttccg gcacgctaaa ccatgttgaa gtccatcctc gggaaattat ccgcgaagcg
     9421 ataaaaataa acgcctcggc gctgatcctt gcacataatc acccttcggg ttgtgctgaa
     9481 cccagtaaag cggataaact cattactgaa cggataataa agagttgtca gttcatggat
     9541 ttacgcgtgc tcgaccatat cgtgattggg cgtggagagt atgtttcttt tgccgaacgc
     9601 ggctggattt aacccgctat gcgcgatcct tcgggatctt tgtctgttcg ggacttgagc
     9661 acatcgctga gtcagcgtat actacgccac ctttgagaat ctcgggtttg gcatttgggc
     9721 ctggcaatcg agagttcaca tagaactgcg atgactgggc tgtaaagcct gacgaggcgc
     9781 caatacccca tacgaagctc gagctaattt gatttttgga gaatagacat gtcccgagtc
     9841 tgccaagtta ctggcaagcg tccggtgacc ggtaacaacc gttcccacgc actgaacgcg
     9901 actaaacgcc gtttcctgcc gaacctgcac tctcaccgtt tctgggttga gagcgagaag
     9961 cgttttgtca ccctgcgcgt atctgctaaa ggtatgcgtg taatcgataa aaaaggcatc
    10021 gatacagttc tggctgaact gcgtgcccgt agcgaaaagt actaagtact tagaggaaat
    10081 aaatcatggc taaaggtatt cgtgagaaaa tcaagctggt ttcttctgct ggtactggtc
    10141 acttctatac cactacgaag aacaaacgta ctaagccgga aaaactggaa ctgaaaaaat
    10201 tcgatccagt tgttcgccag cacgtgatct acaaagaagc gaaaatcaaa taattctcgc
    10261 tttgatgtaa caaaaaacct cgctccggcg gggttttttg ttatctgctt gcccccatat
    10321 tgactgcatc tgttcattcc tggagatgct atgcctgaat tacccgaagt tgaaaccagc
    10381 cgccgcggca tagaaccgca tctcgttggt gcaaccattc ttcatgcagt ggtgcgcaac
    10441 ggacgcttgc gctggccggt ttcagaagag atctaccgtt taagcgacca accagtgctt
    10501 agcgtgcagc ggcgggctaa atatctgctg ctggagctgc ctgagggctg gattatcatt
    10561 catttaggga tgtctggcag cctgcgcatc cttccagaag aacttccccc tgaaaagcat
    10621 gaccatgtgg atttggtgat gagcaacggc aaagtgctgc gctacaccga tccgcgccgc
    10681 tttggtgcct ggctgtggac caaagagctg gaagggcata atgtgctggc ccatcttgga
    10741 ccggagccgc ttagcgacga tttcaatggt gagtatctgc atcagaagtg cgcgaagaaa
    10801 aaaacggcga ttaaaccgtg gctgatggat aacaagctgg tggtaggggt agggaatatc
    10861 tatgccagcg aatcactgtt tgcggcgggg atccatccgg atcggctggc gtcatcactg
    10921 tcgctggcag agtgtgaatt gttagctcgg gtgattaaag cggtgttgct gcgttcgatt
    10981 gagcagggtg gtacaacgct gaaagatttt ctgcaaagtg atggtaaacc gggctatttc
    11041 gctcaggaat tgcaggttta cgggcgaaaa ggtgagccgt gtcgggtgtg cggtacgccg
    11101 attgtggcga ctaaacatgc gcagcgggca acgttttatt gtcggcagtg ccagaagtaa
    11161 ttcatgcgcg ccggatcgca taccatccgg cataaacgct acgctaactt cgccatcagc
    11221 gcctgatgga cattctccgg caggaaatgg gtgacatcgc cctgatggcg cgccacctct
    11281 ttcaccaacg atgaagagat aaacgaccac tctttcgacg gcatcagaaa cacactttcc
    11341 agttccggca ttaagtggcg attcatatgc gccagctgca tttcatattc aaaatccgcc
    11401 accgcacgca ggccacgaat cagcaccgta gcgtgttgat tacgggcgaa gttcgccatc
    11461 aaatcactaa acccaactac ttccacgttc cccagatgcg cggttgcctg ctgtgccagc
    11521 gccacacgct cttccagggt aaacatcggt tttttactgg ggctggcggc aatcgccaga
    11581 ataacgtgat cgaacatttg cgtggcgcgc gtcacgatat cgatatgacc attggtaatg
    11641 ggatcgaaag tacccggata aatcgcccgt ttttgcataa caacctcaat gcgttttcgg
    11701 tggcaggtaa ggttccagca gttgaagcag gcgctgtagc gcgccctggt tttgatacag
    11761 tacttcaacg gcatgacggc catagaaact acggtaatcg gcgtcggtga gtaaagagga
    11821 aacctctttt gcaagcgtag tggcatcggt aacggtaatc agcccgcttg cctgctccag
    11881 ccgcgcgcaa atgtctttaa aattaaaagt atgcggcccc atcaataccg gaatagcgtg
    11941 tgcggcagct tccagcggat tatgcccacc acgttcaacc agtgaaccgc caacaaaggc
    12001 gagatcggca atgccgtaca gtaacatcaa ctcgcccatc gtatcgccaa ccacaacctg
    12061 cgtgctggtg gaggggactt cccctgaaga gcgtgtgata tagcttagtc cagcctggcg
    12121 gacaaggtta atcgcatccg ggaagcgttc tggatgacgg ggtaccagga tgagcaataa
    12181 attcgggaat tgctgtaaca atacctgatg tgcggcgatc accacactct cttcaccttc
    12241 gtgagtgctg gtggcaatcc ataccgggcg gtgtggtgcc cactggcggc gcagcgtcac
    12301 ggctttagca gccaactgcg gcgttacaga aatatcgaat ttcaggctac cggtaacggt
    12361 tacctggtta ttttttgcgc ccagcgccac aaaacgtgca ccatcttctt cattttgggc
    12421 ggcaatcagc gtaatacgac gcagcaagcg acggacgaat ttacccagtt tggcataacc
    12481 tgcggccgag cgggcagaga gtcgcgcgtt cgcgatcacc agcggaattt tacgtttatg
    12541 tagcgccgca atcaggttag gccatagttc ggtttccata atcaacacca gtttagggtc
    12601 gactttattc aggaaacgat taagtgcatc gggcaggtca tacggcagat aaacgtgctg
    12661 aacatccttc ccgaaagccg attgtacgcg ctccgaaccg gttggcgtca tggttgtaac
    12721 ggtaatcggt aaatcaggat aacgatgacg cagcgcgcgc accaacggga tcgccgccag
    12781 agtttcaccg acggagacgg agtgcagcat aatgccgcct ggttttagcg gatggcggta
    12841 aaaaccgtaa cgttcacccc agcgttttcg ataggccgga gccttacgtc cgcgcaccca
    12901 gagccgtatc cagatcagcg gctgaataag gtagagaagg gcggtgtaaa gcaattcgag
    12961 catagtaaat agctgactta tggatgtgct ggggattcta tgtatttagc tgtggcttta
    13021 ccattacttt tcccgttttt gacttaaata gcaatttacc cgccaattct tgctgaacat
    13081 ctatactttt tttgtatttt tatgcgattc attgatttct gctgtacgtg caggaaggaa
    13141 tcgcagagca acagtgaaag aatatggttg ctaatgattt tatttgattg atttctttat
    13201 tgaaaatcaa caatgtgctt aaaaatcatt cgggtcggat tgccgcgaaa gaagtgatac
    13261 actagcgcgt caatatcagt gcggtatcag tattcaggta gctgttgagc ctggggcggt
    13321 agcgtgcttt ttctgcttca ccttaatcgg ataatctcaa caaaaagagt tacttgtgga
    13381 taagctattt cgaagaattt tgctcattaa gatgcgtttt catggggata tgttattaac
    13441 tactcccgtc attagttcgc tgaaaaaaaa ttaccctgac gcaaaaatcg atgtgctgct
    13501 ttatcaggac accatcccga tcctgtctga aaatccagag attaacgcgc tctacggcat
    13561 aaaaaataaa aaagcaaaag cctcagaaaa aattgccaac ttttttcatc tcatcaaggt
    13621 attacgtgcc aataagtatg accttatcgt caatctcacc gatcaatgga tggttgctat
    13681 actggttcgc ttattaaatg cccgtgtgaa aatttcccag gattatcatc atcggcagtc
    13741 tgctttttgg cgtaaaagtt tcacccattt ggtgccgttg cagggtggaa atgtggtgga
    13801 aagtaactta tccgtgctga ccccattgcg agttgattcg ttggtgaagc agacaaccat
    13861 gagttacccg cctgcaagct ggaaacgtat gcgtcgcgaa cttgatcatg ctggtgttgg
    13921 acaaaattat gtggttatcc aacctacggc gcggcaaatc ttcaaatgct gggacaacgc
    13981 caagttttcc gctgtgattg atgccttaca tgctcgtggt tatgaagttg ttctgacgtc
    14041 cggcccagat aaagacgatc tggcctgcgt caatgaaatt gcgcagggat gccagacgcc
    14101 accagtaacg gcgctggctg gaaaggtgac cttcccggaa cttggtgcgt taatcgatca
    14161 tgcgcagctg tttattggcg ttgattccgc accggcgcat attgccgctg cagttaatac
    14221 gccgctgata tcgctgtttg gtgcgacaga ccatattttc tggcgtccct ggtcaaataa
    14281 catgattcaa ttctgggcgg gagattaccg ggaaatgcca acgcgcgatc agcgtgaccg
    14341 aaatgagatg tatctttcgg ttattccggc ggcagatgtc attgctgctg tcgataaatt
    14401 actgccctcc tccacgacag gtacgtcgtt atgatcgttg ctttttgttt atataaatat
    14461 tttccctttg gcggtttgca gcgcgatttt atgcgtattg ctcagacagt cgccgcccga
    14521 ggtcatcatg ttcgggttta tacccagtcg tgggaaggcg aataccctga tgtatttgaa
    14581 ctgatcaaag tgccggttaa atcgcatacc aatcacgggc gcaatgcgga gtattttgcc
    14641 tgggtgcaaa aacatttacg cgaacatccc gtcgataaag tcgttggatt caacaaaatg
    14701 ccggggctgg acgtttatta tgccgctgat gtttgttatg ccgagaaagt cgcgcaggaa
    14761 aaaggctttt tctatcacct gacgtcacgt tatcgccatt atgccgcctt tgagcgggca
    14821 accttcgaac agggcaagcc gacacagctg ctgatgctga cagataagca aatcgccgat
    14881 ttccagaaac attatcagac tgaagcggag cgttttcata ttctgccacc ggggatttat
    14941 cctgatcgta aatatagcca gcagccagct aatagccgtg aaatcttccg taagaagaat
    15001 ggaataaccg aacaacaata tttattgttg caggtcggtt cagacttcac gcgtaaaggt
    15061 gtcgatcgtt ccattgaagc acttgcttcg ttaccggatt cgctgcgcca caacacattg
    15121 ctatatgttg ttggacagga taaaccgcga aaatttgagg cgctggcaga aaaacgcggc
    15181 gtgcgcagta atgttcactt cttctcgggg cgcaacgatg tctcggaatt aatggcggcg
    15241 gcggatttat tactgcatcc tgcctaccag gaagcagcgg gaattgtgct actggaagcg
    15301 attactgcag gattaccggt actaacaaca gccgtttgtg gctatgcgca ttatattgtc
    15361 gacgccaatt gcggcgaggc tattgctgag ccattccgcc aggaaacatt gaatgagatt
    15421 ttacgcaaag cgttaacgca atcttcattg cgccaggcct gggcggaaaa tgcgcgacat
    15481 tatgctgata cacaagattt atacagtctg ccagagaaag cggcggatat cataacgggt
    15541 ggtctggatg gttgaactta aagagccgtt tgccacgtta tggcgcggta aagatccttt
    15601 tgaggaagtt aaaaccttgc agggtgaggt ttttcgtgaa ctggaaactc gccgcactct
    15661 gcgatttgaa atggcgggca aaagctattt tctcaaatgg catcgcggca cgaccctgaa
    15721 agagataatc aaaaatttac tctcattgcg gatgccagta ttaggcgcag accgcgaatg
    15781 gagtgcgatt catcgactgc gggatgtcgg cgttgatact atgtatgggg tggcatttgg
    15841 cgaaaaaggt attaatccgc tgagcagaac ctcgtttatt attaccgaag atctgacccc
    15901 aaccatcagt ctggaagatt actgtgctga ctgggcgacc aacccaccag atgttcgcgt
    15961 aaagcgtatg cttattaagc gtgtcgcgac gatggtgcgc gatatgcatg ctgcgggcat
    16021 taaccaccgt gactgttata tctgtcattt cctgctgcac ttgccttttt ccggtaagga
    16081 agaggagtta aaaatttcgg taattgacct acaccgggcg cagcttcgca cgcgcgttcc
    16141 acgtcgttgg cgcgataaag atcttatagg gctttatttt tcttcaatga atattggcct
    16201 gactcagcgg gatatctggc ggtttatgaa agtgtatttt gccgccccgc ttaaagacat
    16261 tctcaagcag gaacaaggac tgctgtcgca agcagaagca aaagccacaa aaatcaggga
    16321 aagaacgatt cgaaaatcgt tgtaatttcc ggagagaaat atgagtgccc actattttaa
    16381 tccacaagag atgatcaata agacaatcat cttcgatgaa aggccagcgg cgtcagtggc
    16441 atcatcattc catgttgctt atggcattga taaaaacttt ctttttggtt gtggtgtttc
    16501 aatcacgtca gttttgttac ataacaacga cgtgagtttt gttttccacg tttttattga
    16561 tgatatccct gaagccgata tccagcgttt agcccaattg gcgaaaagct atcgtacctg
    16621 tatccagatc catctagtaa attgtgaacg gcttaaggca ttaccgacga ccaaaaattg
    16681 gtctattgcc atgtatttcc gttttgtaat tgcagattac tttattgatc aacaagataa
    16741 gatcctttac ctggatgctg atatcgcctg tcagggaaac ttaaagccgc tgataacaat
    16801 ggatcttgcc aataacgttg ctgctgttgt tactgaacgc gatgctaact ggtggtcgtt
    16861 acggggtcaa agtctgcagt gtaatgaact tgaaaagggc tactttaatt caggtgtcct
    16921 gttaattaat acactagcgt gggcgcagga gtccgtttct gctaaagcga tgtcgatgct
    16981 tgctgataaa gccatcgttt cccgtttcac ctatatggat caagatatcc ttaatcttat
    17041 cctgttaggg aaagttaaat tcattgatgc taaatacaat acgcaattta gtttaaatta
    17101 tgaattaaaa aaatcatttg tttgtccaat taatgatgaa accgtattaa ttcattatgt
    17161 cggcccgaca aaaccctggc attactgggc cggttatcca agtgcgcaac cttttatcaa
    17221 agccaaagaa gcatcgccct ggaaaaatga accgttaatg cggccagtta actcaaacta
    17281 tgctcgttat tgcgccaagc ataattttaa acaaaataaa ccaattaacg ggataatgaa
    17341 ttatatttat tatttttatt taaagataat aaaatgaaat tgagaaaagt taaatgaatg
    17401 aatttataaa agaacggttt tcgtatttag cagataataa aaaagaaaac gccccagagc
    17461 taaatgtttc ctacggtatc gataagaatt ttttgtatgg tgctggcgtt tcaatttctt
    17521 ccgttttgat taataattca gatattaatt ttgtctttca tgttttcact gattatgtgg
    17581 atgatgatta tttaaagtca tttaatgaaa cagcaaaaca atttaatacc tcaattattg
    17641 tatatttaat tgaccccaaa tactttgctg atctgccgac gtcacagttt tggtcatacg
    17701 cgacatactt cagggtattg tcttttgaat atctgagtga aagtatttcc acactgctgt
    17761 atctggatgc cgatgttgtt tgtaaaggaa gcctgaaacc tctcacagaa attatattta
    17821 aagatgagtt tgctgcggtc attcctgaca atgatagtac tcaggcggca tgtgcaaaac
    17881 gcctcaacat tcccgaaatg aatggacgtt atttcaatgc aggcgttatc tatgtcaatc
    17941 ttaaaaaatg gcatgaagca aatttgacac cgtatttact caaactttta cgaggggaaa
    18001 ctaaatatgg ctctcttaaa tatttagatc aggatgcgtt gaatatcgca tttaatatga
    18061 ataatatcta ccttgcgaag gattttgata ctatttatac cctgaaaaac gaactttatg
    18121 atcgtagtca tcgaaagtat cagcaaacca ttaccgataa aacagtgttg attcactata
    18181 cagggataac taaaccatgg catagctggg ctggatatcc gtctgcatca tactttaata
    18241 tcgcgcgtga acaatctccc tggaagaaat atcctcttaa agaggcgcgg actgttgcag
    18301 aaatgcagaa acaatataag catctgtttg cccatggtga gtatataaaa ggcataactt
    18361 cattaattaa gtacaagctt aagaaataaa ttactcttat gattacaagt atacgttatc
    18421 gcggcttctc attttattac aaagataatg ataataaata taaagaaatc tttgatgaaa
    18481 tactggccta taattttaaa acagtaaaag tattatgtaa tattgatgat accaaagtat
    18541 cgttgattga tacgaaatat ggtcgctatg tttttaaagt ctttgctccg aaaacgaaaa
    18601 ggaatgaacg ttttttaaaa tcttttgtaa aaggtgacta ctatcagaat ttgatcgttg
    18661 aaaccgatcg tgtcagaagt gcaggtctta cttttcctaa tgatttttat tttctggctg
    18721 agcgtaaaat tttcaactat gccagtgttt ttatcatgct tatcgagtat gtcgagggcg
    18781 tagagctcaa tgatatgccg attattccag aaaatgttaa agcagaaatt aaggcttcga
    18841 tggaaaaatt gcatgcctta aatatgctat cgggcgaccc acaccggggt aactttatcg
    18901 ttagtaaaga tggtgtcagg ataattgacc tatccggtaa aagctgtacg gcagagcgta
    18961 aagctcgtga tcgtctggcc atggaacgtc acctgggtat tgccaacgaa ataaaagatt
    19021 atggctacta ttcagtaatc tacagaacca aactacgcaa atttattaaa aaattaaaag
    19081 gcaaagcgta aaccacacag tcaaaacgga accaacatgg atttattagc agagagtatt
    19141 actgaagtcg ctgtctctgg ggaaattgct aacaccgatc gtgtgttaaa tatcgcttac
    19201 ggtattgacc gtaacttttt atttggtgcg gcagtatcta tgcaatcagt tgttatgcat
    19261 aacccggacc ttgcggttaa gtttcatctc tttaccgact acattgatga agattatcta
    19321 caacgtgtta atgcttttac cagcaaaaat gctaacgttg aagtaataat ttataaagtc
    19381 tccaatgcct ttattgatat cttccccagc ctgaaacagt ggtcttatgc aacattcttc
    19441 cgtttagttg cgttccagta tttgagtgaa actattgaaa atctgttata tatcgatgct
    19501 gatgtcatct gtaaaggctc attagctgga ttgcttgata ttaattttga tgaggataag
    19561 ttcgcagctg ttattaaaga tgtgcctttt atgcaggaaa aaccagcgaa gcgtctggct
    19621 atagagggac ttccagggaa ttatttcaac gccggtgtag tatatctgca gcttgaagca
    19681 tgggcgaaaa atgattttat gaataaagcc attgctatgc tggcaagtga cccgcagcac
    19741 acgaagtata aatgccttga tcaggatatt ttaaatattc tgttctttgg tcattgtaat
    19801 tttattagcg gcgattatga ttgcttttat ggcattgact atgagttaaa aaataaaagc
    19861 gatgaagatt ataaaaagac cattaccgat gatactaagc tgattcatta tgttggcgta
    19921 acgaagccct ggaacgactg gacgaattat ccctgccaga agtattttaa tgaggcttat
    19981 caggcttctt gctggaatga tgtggcgttt attccagcca cgaatgaaaa gcagtatcaa
    20041 gtgaaatatc aacatgcaaa gaaaaatggt gatacgttta acgcttttat ttacttcatt
    20101 aaatttaaat taaataagta taaaagaaaa ctatttggat aataataaaa atcatggatg
    20161 tctgagttac aataataatt aaggatgagt actatcatat tttattagtt caggcaagag
    20221 aacacgatga gcaatgatta ccctttagta tctataataa taccgacgta taattcatct
    20281 gattacatta ctgaaactct aacgaaatta gaaaaacaaa cttacccaaa ttttgaaatt
    20341 gttattgtta atgatggttc taaagataac acatcaaacg ttttgagaga gtatgggtta
    20401 acccactctc gattaattat tgtcaataaa gaaaatggcg gtgtttcgtc tgccaggaat
    20461 acaggtatcc gcaaggcgca aggacagttt atatgtttta tggatgatga tgatgagata
    20521 gatcctaact atctgctgaa gatgtatacc agacaacatg agacgggagg ggatgcgatt
    20581 tattgtgggc tttatggcca ttatataaaa gatggtgtta cttactcacc tataaataca
    20641 gagtttaatg aaggatcttt acttttcgac tttttttata aaaaggttag attccatata
    20701 gggtgcttgt ttataagaaa acaacttctg gaagagaata atcttttttt tgatgaagat
    20761 ttacgactag gagaagatct tgattttatc tatcgactgc taattacatg cgatatgtat
    20821 gcggttccat attatatgta taagcataac tatagagaaa attccttaat gaactcatgt
    20881 agaaccatca ctcattatcg acatgagtca tttgcgcacg aaagaatcta ctcttctgtg
    20941 atgcagttat acaaaggtaa ccggaaagaa gaaattcata cattattgag tcaaaataga
    21001 gcttatcata aaactcgtta tttatggaat gttctactta atggtgattt taaactattg
    21061 aatcaattag ttgaaagcaa tgaaaaagaa ttaagatatt gtaatcttcc tggcaagaga
    21121 gataagagac gagcaaaaat attagcatca aaaaattata ttctctggag gatggtaaga
    21181 ctggtaaata gaaaaaagaa taaacgttag atcttgcatt aaataaccca tcctcgtagc
    21241 ataggttgaa attatatgtc gttttgttgg aatgaaatta attctggtat aaagtcttta
    21301 attcttatat tatgtatttt ttctttaatg actttgtctt tatgggatga tgttgcaaca
    21361 aagtttcttc atgcagctgg aattatatct gcattgtatt ttcttgcgac accaaaaaaa
    21421 acaataacta ataatcctac tttgttaatt ttcatctcat tatgtctttt gggtatcgta
    21481 aatatcatct ggtattcaca ttataaagtt tcaggctctg tttataccaa tgcatatcgt
    21541 ggcccaatgg aaactggaaa aattgccttg tgtagcgctt ttattttctt agttcttttt
    21601 gctaaaaatg agatgagaac aaaaataaaa tttgggaaac taattctgtt cgcatccctg
    21661 gcaacgcagt tacttttttt tgcgcatgcc atgtggcaac atttctattt aaacgtcgac
    21721 cgtgttgcat tatcagcttc ccacgctaca acagcaggct acatcatcct ttttccttct
    21781 ttactggcat caattctcat tttaaaatcc gactttagac ataaaacaac attatataca
    21841 attaacttca tgcttagctt atgtgctgtc atagtaactg agacgcgtgc agccatatta
    21901 gtgtttccat tctttgcgtt aatattaatc gtaatggata gttatattaa taagcgaatt
    21961 aattataagt tatattgttt tattgcgatt gcattattag caggtgtatt ttcttttaaa
    22021 gatacattgc ttatgagaat gaatgactta aataacgatt tagttaatta ttcgcatgat
    22081 aacaccagaa cttcagtcgg tgcccgtctg gcaatgtatg aagttggctt aaaaacatat
    22141 tctccaatag gacaatcact ggaaaaacgt gcagaaaaaa tacatgagct agaagaaaaa
    22201 gagcctagat tgagtggcgc tttacctttt gtagattctc atttgcataa cgatctcata
    22261 gatacgttat caacgcgtgg tattcctgga gttgtattaa caattttagc attttcagca
    22321 atactcatat atgccttaag aactgctaaa gaaccttata ttttaatctt gcttttttca
    22381 ctactggtag taggcctaag tgatgtaata ctcttttcta aaccggttcc gactgctgtg
    22441 tttgtcacca taatattgct ttgtgcttat tttaaagcac aatcagacca atatttatta
    22501 gataagtaat gaatatatga aataaaatca gcaaggaggc tgattttatt tcaaaattat
    22561 ctattaaggg gttgtaattt aaatcatagc agcgttttca gcgttttctt caatgaatcg
    22621 cttaacagca tttgctgtca attgagacaa ctcattcccc ggagccctac aaaccatttg
    22681 attcttccca tacccaccaa ttaatcccgg atcggttggt ccataaaccg tgatattggg
    22741 tctatccagt gccgccgtta aatggcttaa ccccgtatcc accgacacta caaatttagc
    22801 cccggccagc acgcgggcaa cgccttccag actcatcttc ggcaatactt caacataatc
    22861 aaatccttcc gccagtcgtt tcgcccgttc ttcctcatgc ggcgcgcccc acggaagttt
    22921 aatccgtatt cctgaatcag ccagtaaacc aatcaattct cgccagtgtt cttccggcca
    22981 gtgtttatca tcacgggtcg tcgcatgaag aaatacggca tattcgccag catctgtagg
    23041 caggttcgtc agaaaatgct gtgcgatagc ataatcgccc tgggtttgcg gtttgctata
    23101 gcccaaactt ttggcaaaca gttcgcgggt gcgttctacg gcgtgctgct gttttgcaat
    23161 atgatgctta caattgtaaa acaggctggc taaaggttcg cgagcggttt gccagtccaa
    23221 tccatgcttt acgccatgcg ccagacgtgt caccagtgcc gcgcttttta ccagcccctg
    23281 agcgtcgata actgcgtcat agttctctgc ttgtagcgct tcacgaaacg ctttgcgttc
    23341 agcttttatg ggggccgaga accaggcttt acgccagcga cgtattgcca caggaataac
    23401 tcgctcaacg gcagcgtgcc aggaaggaat ctgtgcgaac ccttcttcca ccacccagtc
    23461 aaacttaatc cctgggattg cctgctgggc atcagtgagt gcgggcaacg tatggagaac
    23521 atcgcccatc gacgatgttt taacgatcaa aacccgcatc cgtcaggctt cctcttgtaa
    23581 caatagcgtg ttgagttctt ccagtacgcg ctggggagta atgtcgatca agctctggtg
    23641 ataaccctcc gcagcgtcac ctttacgcac tttgtgatag ccggtaatca gacggatcac
    23701 gcgcgcttta tgggatagcg gcggtgtgaa gtccgggcta cttggaccat acagggcaac
    23761 cagcggacga ttgagcgccg ccgcaacgtg catcaggcca gaatcgttag tgacaatggc
    23821 tttacaggct gcaatcagga taaccgcttg atcaagctgt gtttcccccg ccaggttccg
    23881 acaccatgcc tgctgctcgg tattcaaagc ggcaagaatc tcattgcccg cttcatgatc
    23941 tttcgcagag ccaaacagaa ccacctgata accttcatca atcagctgct ttgccagttc
    24001 cgcatagtgg tagtgtggcc agcgttttgc cggaccaaac tccgcacccg ggcaaaagcc
    24061 aatcatcgga cgttctgatg aaagcgaaaa ttgattacag gtatatgatt tttcaccttc
    24121 gctcacctgc aactgcggcc ataacaatgg ctgcggcaga tcttgtgcgg tacgcataat
    24181 gcctttgtca taggccagcg cgacatagcg ttccaccatt agcggccagg cttctttatc
    24241 gagcacgcgt acatcgttga gtaaaccgta gcgcatctcg ccgcgccagc cggtgcgatg
    24301 aggaataccc gcgaagaaag gcactaatgc agatttgaag gagttgggta agacgtaggc
    24361 gcggtcgtag cgcttttcac gcaggctatg acccagtttg cggcgttcgc cgatttccag
    24421 cgctccgtga ccgagaggca tagggatagc ttcgttaact tccggcatcc gcgataataa
    24481 tggacggcac catgccggtg ccatcacatc gattatcgcc tggggatagc gcgcctggag
    24541 cgtgcgatag agactttgcg acatcatcat gtcgccaacc caagacgggc cgatcaccag
    24601 tattttcatg cagagctctt atgcgtcgcg attcagccag gccatgtatt ccgttacacc
    24661 ttcagcaacg gttttgaacg gtttgtcgta acccgccgcg cgcagatttg tcagatctgc
    24721 ctgagtgaac gcctggtagc ggcctttcag cttatccggg aacggaatgt attcgatctg
    24781 gcctttcttg tgataagcca gagtagcatc tgctacggcc tggaaggatt ccgcacgacc
    24841 agtaccgagg ttgaagatac cggaaacgcc attttccagg aaccacaggt ttacatctgc
    24901 cacgtcgccc acatagacga agtcacgttt gaagttctcg ctaccttcaa acagcttcgg
    24961 tgattcaccg ttgttaagct gagtgttgag atggaaagcg acgctcgcca tgctgccttt
    25021 atggccttca cgcggtccat aaacgttgaa atagcggaag ccaacaatct gcgagttcgc
    25081 ttcaggcagg atttggcgaa catattcatc aaacaggaat tttgagtaac cgtagacgtt
    25141 caacggtttt tcgtactcgc gggattcaat aaagtcggag gtgcgtccgc cgtaggtggc
    25201 tgcggaagaa gcgtacagga acgggatttc gcgctccagg cagtagtgca gcagctcctt
    25261 ggagtattga tagttgttat ccatcatata cttgccgtcc cactcggtgg tggaagagca
    25321 tgcgccttcg tggaaaatcg cttcgacatc gccgaactct tcgccagcca taatctggat
    25381 caggaagtct tccttatcca tatagtccgc gatatccaga tccaccaggt tcacaaactt
    25441 ggtgccgtct ttcaggttgt ccaccaccag aatatcggtg atgcctttat cattcagggc
    25501 cttaacgatg ttgctgccga taaagcccgc gccgccggta acgatgatca taactgtaac
    25561 cttcgaatta tggagtcaga gacaatctca gacacgaata cttctatcat atcactatac
    25621 ggcgttggct tcagccattc gccaaaagtg agattgatgg acgttattta tcctgaattt
    25681 tgcagaagtg ttaacgcgtc atctcgtcgc gacgtataag tttgggtaat atgtgctgga
    25741 atttgccctg tctggagaat cgcaatgcgt ggagaatttt atcagcagtt aaccaacgat
    25801 ctggaaaccg cacgggcgga agggttgttt aaagaagagc gcattattac gtctgcgcag
    25861 caagcagata tcactgtggc tgatggaagc cacgtcatta acttttgtgc caacaactat
    25921 ctcgggctgg cgaatcatcc ggatctgatt gcggcagcaa aggcgggaat ggattctcac
    25981 ggtttcggca tggcttcggt gcgttttatt tgcggcactc aggacagcca taaagagctt
    26041 gaacaaaaac tggcggcatt cctggggatg gaagatgcga ttctctactc ttcctgcttt
    26101 gatgctaacg gtggactgtt tgaaacgctg ctgggtgcgg aagacgccat tatctccgac
    26161 gcactgaacc acgcgtctat tattgatggt gtgcgtctgt gcaaagctaa acgctatcgc
    26221 tatgccaaca acgatatgca ggagctggaa gcacgtctga aagaagcgcg tgaagccggt
    26281 gcgcgtcatg tgctgattgc caccgatggt gtgttctcaa tggacggcgt gattgccaac
    26341 ctgaaaggcg tttgcgatct ggcagataaa tacgatgcct tggtgatggt ggatgactcc
    26401 cacgcggtcg gttttgtcgg tgaaaatggt cgtggttccc atgaatactg cgatgtgatg
    26461 ggccgggtcg atattatcac cggtacgctt ggtaaagcgc tgggcggggc ttctggtggt
    26521 tataccgcgg cgcgcaaaga ggtggttgag tggctgcgcc agcgttctcg tccgtacctg
    26581 ttctccaact cgctggcacc ggccattgtt gccgcgtcca tcaaagtact ggagatggtc
    26641 gaagcgggca gcgaactgcg tgaccgtctg tgggcgaacg cgcgtcagtt ccgtgagcaa
    26701 atgtcggcgg cgggctttac cctggcggga gccgatcacg ccattattcc ggtcatgctt
    26761 ggtgatgcgg tagtggcgca gaaatttgcc cgagagctgc aaaaagaggg catttacgtc
    26821 accggtttct tctatccggt cgttccgaaa ggtcaggcgc gtattcgtac ccagatgtct
    26881 gcggcgcata cccctgagca aattacgcgt gcagtagaag cattcacgcg tattggtaaa
    26941 caactgggcg ttatcgcctg aggatgtgag atgaaagcgt tatccaaact gaaagcggaa
    27001 gagggcatct ggatgaccga cgtccctgta ccggaactcg ggcataacga tctgctgatt
    27061 aaaatccgta aaacagccat ctgcgggact gacgttcaca tctataactg ggatgagtgg
    27121 tcgcaaaaaa ccatcccggt gccgatggtc gtaggccatg aatatgtcgg tgaagtggta
    27181 ggtattggtc aggaagtgaa aggcttcaaa atcggcgatc gcgtttctgg cgaaggccat
    27241 atcacctgcg gtcactgtcg caactgtcgt ggcggtcgta cccatctgtg ccgcaacacg
    27301 atcggcgtcg gcgttaaccg tccgggctgc ttcgccgaat atctggtgat cccggcgttc
    27361 aacgccttca aaatcccaga caatatctcc gacgacctgg cttccatttt tgatcccttc
    27421 ggtaacgccg tgcataccgc gctgtcgttc gatctggttg gcgaggatgt gctggtctct
    27481 ggtgcaggtc cgataggtat tatggctgcg gcggtggcga aacacgttgg tgcacgcaat
    27541 gtggtgatca ctgatgttaa cgaataccgc cttgagctgg cgcgcaaaat gggtatcacc
    27601 cgtgcggtta acgtcgcgaa agaaaacctt aatgatgtga tggctgaact gggcatgacc
    27661 gaaggctttg atgtcggtct ggaaatgtcc ggtgcgccgc cagcgtttcg taccatgctt
    27721 gacaccatga accacggcgg ccgtattgcg atgctgggta ttccgccgtc tgatatgtct
    27781 atcgactgga ccaaagtgat ctttaaaggc ttgttcatta aaggtattta cggtcgtgag
    27841 atgtttgaaa cctggtacaa gatggcggcg ctgattcagt ctggcctcga tctctcgccg
    27901 atcattaccc atcgtttctc tatcgatgat ttccagaagg gctttgacgc tatgcgttcg
    27961 ggccagtccg ggaaagtaat tctgagctgg gattaacacg aacaagggct ggtattccag
    28021 cccttttatc tggggataat ctgttgaata tgtaaaatcc tgtcagtgta ataaagagtt
    28081 cgtaattgcg ctgatctctt atatagctgt tctcattatc tctctaccct gaagtgactc
    28141 tctcacctgt aaaaataata tctcacaggc ttaatagttt cttaatacaa agcctgtaaa
    28201 acgtcaggat aacttcagag gtcgtcggta atttatgatg aacagcacca ataaacttag
    28261 tgttattatt ccgttatata atgcgggcga tgatttccgc acttgtatgg aatctttaat
    28321 tacgcaaacc tagactgctc tggaaatcat tattattaac gatggttcaa cggataattc
    28381 tgttgaaata gcaaagcatt acgcagaaaa ctatccgcac gttcgtttgt tgcatcaggc
    28441 gaatgctggc gcatcggtag cgcgtaatcg tgggatcgag gtggcgacgg gcaaatatgt
    28501 cgcttttgtc gatgctgacg atgaggtcta tcccaccatg tacgaaacgc tgatgaccat
    28561 ggcgttagag gacgacctcg acgtggcgca gtgcaacgct gactggtctt ttcgtgaaac
    28621 gggagaaacc tggcaatcca tccccagcga tcgccttcgc tcaaccggcg tattaaccgg
    28681 cccggactgg ctgcggatgg ggctttcttc gcgccgttgg actcacgttg tctggatggg
    28741 ggtttatcgc cgtgatgtta ttgttaaaaa taacattaaa tttattgccg gattacatca
    28801 tcaggatatt gtctggacaa cagaattcat gtttaacgcg ctgcgtgcgc gatataccga
    28861 gcaatcatta tataaatatt atctgcataa tacgtcagtg agtcggttgc atagacaagg
    28921 gaataaaaac cttaattatc aacgtcacta tattaagatt acccgcctgc tggagaaatt
    28981 aaatcgaaat tatgccgaca aaattacgat ttatccggaa tttcatcagc aaataactta
    29041 cgaagcattg cgtgtttgcc atgcggtgcg caaagagccg gatattctta cccgccaacg
    29101 gatgattgcc gagatattta cttccggtat gtataagcgc ctgattacca atgtgcgcag
    29161 cgtgaaggtc ggttaccagg cgttactgtg gtctttccgc ttatggcaat ggcgcgacaa
    29221 aacgcggtcg caccatcgca ttacgcgtag cgcctttaat ttgcgctagc gttaaacttc
    29281 gccgcttcgg gctgtttgcc ccagccttgc cactgatgct ggaagtaaac gatcagcgtg
    29341 ctctggctga tgctttcgct taatacttca aagaagcgat tagcataaac aggttctatc
    29401 ggtttcttcg gtttgcacag cttcacgcca cggaacggat tacgcggtgc atcaggcaca
    29461 gcgtttttcg gcggtgtaga agtatcaacc tgcggttcat tcagcaagct gctggctttc
    29521 accagcgtaa tgtctggcgg caggttataa accatctgtt gtagcacgcg taccgttaaa
    29581 gggtgaggat gcccaatggc aatggttgaa ccgttgcgac gcgccagatc aattgcgcga
    29641 ttaaattgca cacggatgtc cgcttcgttc tgcgaatcgt cgaggaacac cttccgttta
    29701 ataaccttca cgccagtacc ttgcgcggcg cgcatcgcct gggtattacc gatggttacg
    29761 ctgtcgagga agtaaagatt gtaacgctcc agtgcctgca tcactttctg cataccaaac
    29821 aggttagagg tcatcttgct acccatgtgg ttgttgatcc ccacggcata gggcacgtta
    29881 ttgaccgcac tacgaataat gcgctcaatt tcgtcgctgc tcatctccgg gcgcagcgta
    29941 tttttctcca gcggctgttt actcagtggt gccatcggga gatgaatcaa cacttcgtgc
    30001 ccgctgttat gcgctttggt cgccatctct ctggcgtgcg gtgaatcggg taatacagcg
    30061 acggagatag cggagggcat cgccagcacc tggttttcgt tgtgcgggcg atacccaaaa
    30121 tcatcaatga cgatggcaag tttgccagca agtacggggg aggagagcgc caacagagcg
    30181 gcaaatgcaa gaacgttacg acgaaatgga aacaaaactt atcttcccaa ccacggctgt
    30241 ggattgaccg cctgaccctg gcggcgaatt tcgaaataga gtgaaggccg accctgaccg
    30301 ccactgctgc ccaccagtgc aattggctgg cccgcgcgaa cctgcgaacc aacgctcacc
    30361 agtgcgctct gattatagcc gtaaagactc atgtcgcctt taccgtgctc aaccaccacc
    30421 accagaccgt aaccttgcag ccagtcagcc agaatcactc gaccgtcggc aattgcttta
    30481 acttcagtac cttcagaggc accgataacc atccctttcc agcgtaattc accctgtagc
    30541 tgctcgccat agcgatgcag cgtcggcccg cgaaccggcc agaatgcctg accacgcggc
    30601 gcacccagac caccagttcg ggacatcagc gatttttcgc tttcggtcgg tttgtaggtg
    30661 gtgcctttgc gcgtcgcttc tttctggcgg tcgcgaaccg cctgggcctc acgcgcttct
    30721 cgttcagcac gcgctttcgc cgcggcttcc gcacgggcaa tgctgttacg cagacgggat
    30781 tcgttggcac gcagttcact tagctgctgc tgaccttgct ggatggaaga ttccagcccc
    30841 gccagcgtct ttttacgctc gttcagagcc tgagtcagtt tcgcctgttg ggcgcgctgt
    30901 tcatataaca gcgtttgttg ctcgctttgt ttctcttcca gttcagcacg ctgcatggcg
    30961 acttcttcac gcgtttgctt caactgggca atggtttctt gtcgcgcctg gttgagatag
    31021 ccgaaataag cctgtaaacg ctgtccacac tggctttctt caccgctgag aattagctga
    31081 ataccggtat gctcgccctg acggaatgcg gcatccagtt gtgcggcgag gctgcgctcc
    31141 tgggcggctt tttgctgctc cagtttggca atcgacgcgt tcatctcatc aatctgttta
    31201 ttgagttgat tgagcgtgtt ttgcgtttcg cgcagcttac gggtggcttc agagatcgct
    31261 tcttcctgct ttttcaattg tgcgagcagg cttgcgcgtt gttgttgctt ttggcgtacc
    31321 gcgcgctctt ttgcggcgat atcggcctga atagatttga gttggtcacg ctcatccgcg
    31381 tgggcggaaa aggcgcacaa caatacgcca gcgctaagaa cgctggcgta gatgatgggc
    31441 ctgattgcaa acctgcgcgg tttcacggcc cgtgtcatgg tattaatcgc ctttcccctc
    31501 atggggaggg attattccac gatgaacagc ggcttaccag tcatctcttg cgggatttcc
    31561 atacccatca gcgacaacat ggtcggcgcg atgtcagaaa gtttgccgcc tgcaaccgct
    31621 ttcacgttct tatcaccaac gtaaatcagc ggaactggca ggttggtgtg tgccgtgtgt
    31681 gcctgacccg ttgccggatc gcgcatctgt tcagcgttac cgtggtcagc ggtgatcagc
    31741 agttgtccac ccacggactc aaccgctttc gcgacttctt ccacgcagtg atccagtgct
    31801 tcaaccgctt taaccgccgc ttccatcacc ccggtgtgac ctaccatgtc gccgttcgga
    31861 tagttacaga taatggtgtc gtatttgccg ctcttgatgg ccgcaaccag tttttcggtc
    31921 agctctgcgg agctcatttc cggttgcaga tcgtaggtag ccactttcgg tgagttgatc
    31981 agaatgcgat cttcgccttt gaatgactct tctacgccac cgttgaagaa gaaagtaacg
    32041 tgggcatatt tttcggtttc ggaaatacgc aactgagttt tgtcgttttt cgccatccac
    32101 tcgccgaagg tgttaaccag ggaagcgggt gggtaagcaa ccgcagtttt gatgtcagcg
    32161 gcgtattcgg tcagcatcac gaaatcgacg ttaaccactt tcttacgcgc gaagccgtcg
    32221 aaatctgcgt ttacgaatgc acgagtgatt tcgcgcgcgc ggtcagcacg gaagttcatg
    32281 aaaatcagcg catcgccgtc ttccattgcc gcatctggct gaccttctgc acgaataacg
    32341 gtcgctttca cgaactcgtc gttttcgtcg cgagcataag ctgcctgcaa accagcaacg
    32401 gcagtatcgg cctggaactc accctgcgcc agagtcagca ggtcataggc tttttcaacg
    32461 cgatcccaac ggttatcgcg gtccatcgcg tagtaacgac caatgatgga cgctacgcgg
    32521 cctttaccca gcgcagcaaa tttctcttca aattttttca gcgaggattc agcactgcgc
    32581 ggcggggtgt cgcgaccgtc aaggaatgcg tgcaggtaga ttttttctgc gccgcgttca
    32641 gctgccagtt ctaccatcgc catgatgtga tcttcgtggc tgtgtacgcc gcctgcggag
    32701 agcagaccca taatgtgtac tgctttacct gcgtttttcg ctttatctac cgcgccagtc
    32761 agcactggat tagcaaagaa agcgcgatct ttgatttcaa cgtccagacg agtcaggtcc
    32821 tgatacacga tgcggccggc acccaggtta acgtggccta cttcggagtt acccatctga
    32881 cggtcaggca gaccgacttc cagaccggaa gcgtcgatca gggtatgcgg acgattggcc
    32941 cacagtgcat ccattaccgg ggttttagca ctaaaaatgg cgttatcctg ctgttcttca
    33001 cgatagccat agccatccag aatcaccagt accataggtt ttttagaaac cgacattgcg
    33061 acaacctcat actcaagagt caaaatttgc gtaattttac tacagctgaa tcgataaaat
    33121 agcctctgaa gatcaaaata tacgaccgct cgcggcaagc cgatgccaga tttgcgcttt
    33181 tttttcgtcg tgccccgcaa aattgcattc cagttaacgc gctggctgta tttgccgcac
    33241 cgcgcaggta tactcctttc ctggtttttt taatcactac gtcgggagtt gttacccccc
    33301 atgcaagaaa ttatgcaatt tgttggccgt catcccatac tgagtatcgc ttggatcgcg
    33361 ttactggtgg cggttcttgt gactacgttt aagagcctga cctcgaaagt gaaggtgatt
    33421 actcgtggtg aagctacgcg tctgatcaac aaagaagacg ctgtggttgt ggatttacgt
    33481 cagcgtgatg acttccgtaa aggccatatc gcaggttcta tcaatctgtt gccgagcgaa
    33541 atcaaagcca acaatgttgg tgagcttgag aagcacaaag acaaaccggt tatcgtggta
    33601 gacggttctg gcatgcagtg ccaggagcct gcaaacgcgc tgacgaaagc tggttttgcg
    33661 caagtattcg tgctgaaaga gggcgttgct ggctgggctg gcgaaaactt gcctctggtg
    33721 cgcggcaaat aatttacctg tcgtctttca tgatgcaggc cgttagctgc aattaggccc
    33781 ccagcgactt attgttataa gcttctgggg acactccatt ttgcagccgc cctgcaacat
    33841 gaaatttcag ggtaaaaaaa caggagctaa attatggcca atgttgaaat ctataccaaa
    33901 gaaacctgcc cgtattgcca tcgtgcaaaa gcactgctga gcagcaaggg cgtgagtttt
    33961 caggagttgc cgatcgatgg caatgccgcc aagcgtgaag agatgatcaa acgcagcggt
    34021 cgcaccacgg ttccccagat ttttattgac gcacagcaca ttggcggctg tgatgacttg
    34081 tatgcattgg atgcacgtgg tggactggat cccctgctga aataacgtgt gaacgttggc
    34141 attacattgc gcagtattta aggacaacac ttaagggttt tctacacatg tcagaacaaa
    34201 acaacactga aatgactttc cagatccaac gtatttatac caaggatatc tctttcgaag
    34261 cgccgaacgc gccgcacgtt ttccagaaag attggcaacc agaagttaaa cttgatctgg
    34321 atacggcatc ttcccaactg gcagatgacg tatacgaagt ggtactgcgt gttaccgtaa
    34381 cggcctccct gggcgaagaa accgcgttcc tgtgtgaagt tcagcagggc ggtattttct
    34441 ccatcgcggg tatcgaaggc acccagatgg cacattgcct gggcgcatac tgcccgaaca
    34501 ttctgttccc gtatgctcgt gagtgcatca ccagcatggt atcccgcggt acattcccgc
    34561 aactgaacct tgcgccggtt aacttcgatg cgctgttcat gaactatttg cagcagcagg
    34621 ctggcgaagg tactgaagaa catcaggatg cctgatgaac caacgtaatg cttcaatgac
    34681 tgtgatcggt gccggctcgt acggcaccgc tcttgccatt accctggcaa gaaatggcca
    34741 cgaggttgtc ctctggggcc atgaccctga acatatcgca acgcttgaac gcgaccgctg
    34801 taacgccgcg tttctccccg atgtgccttt tcccgatacg ctccatcttg aaagcgatct
    34861 cgccactgcg ctggcagcca gccgtaatat tctcgtcgtc gtacccagcc atgtctttgg
    34921 tgaagtgctg cgccagatta aaccgctgat gtgtcctgat gcgcgtctgg tgtgggcgac
    34981 caaagggctg gaagcggaaa ccggacgtct gttacaggac gtggcgcgtg aggccttagg
    35041 cgatcaaatt ccgctggcgg ttatctctgg cccaacgttt gcgaaagaac tggcggcagg
    35101 tttaccgacg gctatttcgt tggcctctac cgaccagacc tttgccgatg atctccaaca
    35161 attgctgcac tgtggcaaaa gtttccgcgt ttacagcaac ccggatttca tcggtgtgca
    35221 gcttggcggt gcggtgaaaa acgtcattgc cattggcgcg gggatgtccg acggtatcgg
    35281 ttttggtgcg aatgcgcgta cggcactgat cacccgtggg ctggctgaaa tgtcgcgtct
    35341 tggcgcggcg ctgggtgccg agcctgccac ctttatgggc atggcggggc tgggcgatct
    35401 tgtgcttacc tgtaccgaca accagtcgcg taaccgccgt tttggcatga tgctcggtca
    35461 gggcatggat gtacaaagcg cgcaggagaa gattggtcag gtggtggaag gctaccgcaa
    35521 tacgaaagaa gtccgcgaac tggcgcatcg cttcggcgta gaaatgccaa taaccgagga
    35581 aatttatcaa gtattatatt gcggaaaaaa cgcgcgcgag gcagcattga cgttattagg
    35641 tcgtgcacgc aaggacgagc gcagcagcca ctaaccccag ggaacctttg ttaccgctat
    35701 gacccggccc gcgcagaacg ggccggtcat tatctcatcg tgtggagtaa gtaatgtcgt
    35761 gtgaagaact ggaaattgtc tggaacaata ttaaagccga agccagaacg ctggcggact
    35821 gtgagccaat gctggccagt ttttaccacg cgacgctact caagcacgaa aaccttggta
    35881 gtgcactgag ctacatgctg gcgaacaagc tgtcatcgcc aattatgcct gctattgcta
    35941 tccgtgaagt ggtggaagaa gcctacgccg ctgacccgga aatgatcgcc tctgcggcct
    36001 gtgatattca ggcggtgcgt acccgcgacc cggcagtcga taaatactca accccgttgt
    36061 tatacctgaa gggttttcat gccttgcagg cctatcgcat cggtcactgg ttgtggaatc
    36121 aggggcgtcg cgcattggca atctttctgc aaaaccaggt ttctgtgacg ttccaggtcg
    36181 atattcaccc ggcagcaaaa attggccgtg gcattatgct cgaccacgcc acgggcatcg
    36241 ttgtgggtga aacggcggta attgaaaacg acgtatcgat tctgcaatct gtgacgcttg
    36301 gcggtacggg taaatctggt ggtgaccgtc acccgaaaat tcgtgaaggt gtgatgattg
    36361 gcgcgggcgc gaaaatcctc ggcaatattg aagttggtcg cggcgcgaag attggcgcag
    36421 gttccgtggt gctgcaaccg gtgccgccgc atacaaccgc cgctggcgtt ccggctcgta
    36481 ttgtcggtaa accagacagc gataagccat caatggatat ggaccagcat ttcaacggta
    36541 ttaaccatac atttgagtat ggggatggga tctaatgtcc tgtgatcgtg ccggatgcga
    36601 tgtaatcatc tatccggcat acagtaacta atctctcaac aacgctcccg gatatcccag
    36661 ctgccgccag gcttcataca ccactaccga caccgcattg gacagattca tgctgcggct
    36721 gtccggcacc atcggaatgc gaattttttg ttcagcgggc agggcatcaa gaatgctcgc
    36781 tggcaggccg cgtgtttccg ggccgaacat cagataatcg ccatcctgat agcttacggc
    36841 gctgtgagca ggcgtacctt tcgtggtgag ggcaaacagg cgctggggat tttctgcttc
    36901 gaggaacgcg cgatagtcat gatgacgcgt aacggcggta aactcgtgat agtccagccc
    36961 cgcgcggcgc aggcgcttat cgtcccaggc aaatcccatc ggttcgatga tatgcagacg
    37021 aaagccggta ttagcgcaaa gacggatgat gttgccagta tttggcggaa tttctggttc
    37081 gtaaagtacg atgtttagca tactgccccc ttagtgcggg ggcaggatag cagaaaattg
    37141 gtgaaccgtg cggccttttc ccctcacccc ggccctcccc ctgtctcttg atcaggagat
    37201 ctgatcaaga gacagctccc tgagggagag ggttaggggg gtgcccctat taagttgtca
    37261 agcatgttat gacccctgcg gggtataaaa agtcccgtcg cgcatcatgg cgaacagaa
//
LOCUS       DAJVUK010000020        36827 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.020, whole genome shotgun sequence.
ACCESSION   DAJVUK010000020 DAJVUK010000000
VERSION     DAJVUK010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36827
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.020"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            584..670
                     /gene="leuL"
                     /locus_tag="OQQ57_000981"
     CDS             584..670
                     /gene="leuL"
                     /locus_tag="OQQ57_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HCS1955821.1"
                     /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
     gene            763..2334
                     /gene="leuA"
                     /locus_tag="OQQ57_000982"
     CDS             763..2334
                     /gene="leuA"
                     /locus_tag="OQQ57_000982"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HCS1955822.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
                     LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            2334..3425
                     /gene="leuB"
                     /locus_tag="OQQ57_000983"
     CDS             2334..3425
                     /gene="leuB"
                     /locus_tag="OQQ57_000983"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HCS1955823.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDITGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            3428..4828
                     /gene="leuC"
                     /locus_tag="OQQ57_000984"
     CDS             3428..4828
                     /gene="leuC"
                     /locus_tag="OQQ57_000984"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HCS1955824.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGQVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            4839..5444
                     /gene="leuD"
                     /locus_tag="OQQ57_000985"
     CDS             4839..5444
                     /gene="leuD"
                     /locus_tag="OQQ57_000985"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HCS1955825.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(5493..6575)
                     /locus_tag="OQQ57_000986"
     CDS             complement(5493..6575)
                     /locus_tag="OQQ57_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1955826.1"
                     /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV
                     GAQPFWIGLFYTVNTIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNAPLFAFNRH
                     YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSIAAGIFTLSLVLIAFML
                     PSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPD
                     KLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALM
                     TLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSW
                     GHFAVYWVIAVISVVALFLTAKVKDV"
     gene            complement(6677..6808)
                     /gene="sgrT"
                     /locus_tag="OQQ57_000987"
     CDS             complement(6677..6808)
                     /gene="sgrT"
                     /locus_tag="OQQ57_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HCS1955827.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES"
     gene            6897..8552
                     /gene="sgrR"
                     /locus_tag="OQQ57_000988"
     CDS             6897..8552
                     /gene="sgrR"
                     /locus_tag="OQQ57_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SgrR"
                     /protein_id="HCS1955828.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE
                     NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA
                     DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN
                     TTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG
                     CYYLLFDSRTHRGANQQVRDWVNYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
                     IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
                     DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
                     SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      8586..8685
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            8716..9699
                     /gene="thiB"
                     /locus_tag="OQQ57_000989"
     CDS             8716..9699
                     /gene="thiB"
                     /locus_tag="OQQ57_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HCS1955829.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISGWQRAVSR"
     gene            9675..11285
                     /gene="thiP"
                     /locus_tag="OQQ57_000990"
     CDS             9675..11285
                     /gene="thiP"
                     /locus_tag="OQQ57_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HCS1955830.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPDEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIGLQQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            11269..11967
                     /gene="thiQ"
                     /locus_tag="OQQ57_000991"
     CDS             11269..11967
                     /gene="thiQ"
                     /locus_tag="OQQ57_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706019.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HCS1955831.1"
                     /translation="MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELL
                     SGKASASAILGITG"
     gene            complement(12080..12844)
                     /locus_tag="OQQ57_000992"
     CDS             complement(12080..12844)
                     /locus_tag="OQQ57_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1955832.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV"
     gene            complement(12930..13808)
                     /gene="araC"
                     /locus_tag="OQQ57_000993"
     CDS             complement(12930..13808)
                     /gene="araC"
                     /locus_tag="OQQ57_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HCS1955833.1"
                     /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
                     YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL
                     LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RAGCEEKVNDVAVKLS"
     gene            14147..15847
                     /gene="araB"
                     /locus_tag="OQQ57_000994"
     CDS             14147..15847
                     /gene="araB"
                     /locus_tag="OQQ57_000994"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HCS1955834.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLNWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
                     "
     gene            15858..17360
                     /gene="araA"
                     /locus_tag="OQQ57_000995"
     CDS             15858..17360
                     /gene="araA"
                     /locus_tag="OQQ57_000995"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HCS1955835.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI
                     GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH
                     TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR"
     gene            17560..18255
                     /gene="araD"
                     /locus_tag="OQQ57_000996"
     CDS             17560..18255
                     /gene="araD"
                     /locus_tag="OQQ57_000996"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HCS1955836.1"
                     /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
                     GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT
                     IWAQSGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMEIFCRQLAPQLPDMQQTLLDKH
                     YLRKHGAKAYYGQ"
     gene            18330..20681
                     /gene="polB"
                     /locus_tag="OQQ57_000997"
     CDS             18330..20681
                     /gene="polB"
                     /locus_tag="OQQ57_000997"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HCS1955837.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGSENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            20845..23751
                     /gene="rapA"
                     /locus_tag="OQQ57_000998"
     CDS             20845..23751
                     /gene="rapA"
                     /locus_tag="OQQ57_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HCS1955838.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHMPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLLDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
     gene            23763..24422
                     /gene="rluA"
                     /locus_tag="OQQ57_000999"
     CDS             23763..24422
                     /gene="rluA"
                     /locus_tag="OQQ57_000999"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HCS1955839.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(24539..25354)
                     /gene="djlA"
                     /locus_tag="OQQ57_001000"
     CDS             complement(24539..25354)
                     /gene="djlA"
                     /locus_tag="OQQ57_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HCS1955840.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            25609..27963
                     /gene="lptD"
                     /locus_tag="OQQ57_001001"
     CDS             25609..27963
                     /gene="lptD"
                     /locus_tag="OQQ57_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HCS1955841.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVEHFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
     gene            28016..29302
                     /gene="surA"
                     /locus_tag="OQQ57_001002"
     CDS             28016..29302
                     /gene="surA"
                     /locus_tag="OQQ57_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HCS1955842.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            29302..30291
                     /gene="pdxA"
                     /locus_tag="OQQ57_001003"
     CDS             29302..30291
                     /gene="pdxA"
                     /locus_tag="OQQ57_001003"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HCS1955843.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMILNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            30288..31109
                     /gene="rsmA"
                     /locus_tag="OQQ57_001004"
     CDS             30288..31109
                     /gene="rsmA"
                     /locus_tag="OQQ57_001004"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HCS1955844.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            31112..31489
                     /gene="apaG"
                     /locus_tag="OQQ57_001005"
     CDS             31112..31489
                     /gene="apaG"
                     /locus_tag="OQQ57_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HCS1955845.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            31496..32338
                     /gene="apaH"
                     /locus_tag="OQQ57_001006"
     CDS             31496..32338
                     /gene="apaH"
                     /locus_tag="OQQ57_001006"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HCS1955846.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE
                     AAAS"
     gene            complement(32416..32895)
                     /gene="folA"
                     /locus_tag="OQQ57_001007"
     CDS             complement(32416..32895)
                     /gene="folA"
                     /locus_tag="OQQ57_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HCS1955847.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(33087..34949)
                     /gene="kefC"
                     /locus_tag="OQQ57_001008"
     CDS             complement(33087..34949)
                     /gene="kefC"
                     /locus_tag="OQQ57_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HCS1955848.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(34942..35472)
                     /gene="kefF"
                     /locus_tag="OQQ57_001009"
     CDS             complement(34942..35472)
                     /gene="kefF"
                     /locus_tag="OQQ57_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HCS1955849.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGKALHGKHLLW
                     AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(35580..36827)
                     /locus_tag="OQQ57_001010"
                     /pseudo
     CDS             complement(35580..36827)
                     /locus_tag="OQQ57_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414587.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT         8959 a        10084 c         9691 g         8093 t
ORIGIN      
        1 catgcatata aaataagaaa aagcaaaatg agtaaaattc ggaaaacata aagatacggg
       61 ttctgataaa aacagaatcc attgccgtgg aatgagtcat ttaccacagc ataataatcc
      121 ataatgtttt tgttgcgaaa acaatctaat cataactacc gcgaatactc aatcatctac
      181 aaaatggatt aaatgtgctt atttaataat taatttatat atttaatgca ttaattatta
      241 acattaatgg atcaataata ttcaccatat caatatcaaa aaaaattcgc aaaacatata
      301 attcaataca aatcatcagg ataggttttg caacgcgtgc attttgtccc ctttttcctc
      361 gttgattaga tgcaaaaatt tattctgaaa tatgtcaacc tatgaaaagt gtcggtcgtt
      421 aaacagaaat taatatcgct tgctttaacc accgcagcac aattagctaa ttttacggat
      481 gcagaactcg cgctggcggg acgtttttat tgcgtcaggg ttgacatccg tttttgtatc
      541 cagtaactct aaaagcatat cgcattcatc tggagctgat ttaatgactc acatcgttcg
      601 ctttatcggt ctactactac taaacgcatc ttctttgcgc ggtagacgag tgagcggcat
      661 ccagcattaa gccagcacgc agtcaaacaa aaaacccgcg ccattgcgcg ggttttttta
      721 tgcccgaagc gaggcgctct aaaagagaca aggacccaaa ccatgagcca gcaagtcatt
      781 attttcgata ccacattgcg cgacggtgaa caggcgttac aggcaagctt gagtgtgaaa
      841 gaaaaactgc aaattgcgct ggcccttgag cgtatgggtg ttgacgtgat ggaagtcggt
      901 ttccccgtct cttcgccggg cgattttgaa tcagtgcaaa ccatcgcccg ccaggttaaa
      961 aacagccgcg tatgcgcgtt agctcgctgc gtggagaaag atatcgacgt ggcggccgaa
     1021 tccctgaaag tcgccgaagc cttccgtatt cataccttta ttgccacttc gccaatgcac
     1081 atcgccacca agctgcgcag cacgctggat gaagtgatcg aacgcgctat ctatatggtg
     1141 aaacgcgccc gtaattacac cgatgatgtt gaattttctt gcgaagatgc cgggcgtacc
     1201 cccattgccg atctggcgcg agtggtcgaa gcggcgatta atgccggtgc caccaccatc
     1261 aacattccgg acaccgtggg ctacaccatg ccgtttgagt tcgccggaat catcagcggt
     1321 ctgtatgaac gcgtacctaa catcgacaaa gccattattt ccgtacatac ccacgacgat
     1381 ttaggcctgg cggtcggcaa ctcactggcg gcggtacatg ccggtgcacg ccaggtggaa
     1441 ggtgcaatga acgggatcgg cgagcgtgcc ggtaactgtt cgctggaaga agtcatcatg
     1501 gcgattaaag ttcgtaagga tattctcaac gtccacaccg ccattaatca ccaggagata
     1561 tggcgcacca gccagttagt tagccagatt tgtaatatgc cgatcccggc aaacaaagcc
     1621 attgttggca gcggcgcatt cgcccactcc tccggtatcc accaggatgg cgtgctgaaa
     1681 aaccgcgaaa actacgaaat catgacacca gaatctattg gtctgaacca aatccagctg
     1741 aatctgacct ctcgttcggg gcgtgcggcg gtgaaacatc gcatggatga gatggggtat
     1801 aaagaaagtg aatataattt agacaatttg tacgatgctt tcctgaagct ggcggacaaa
     1861 aaaggtcagg tgtttgatta cgatctggag gcgctggcct tcatcggtaa gcagcaagaa
     1921 gagccggagc atttccgtct ggattacttc agcgtgcagt ctggctctaa cgatatcgcc
     1981 accgccgccg tcaaactggc ctgtggcgaa gaagtcaaag cagaagccgc caacggtaac
     2041 ggtccggtcg atgccgtcta tcaggcaatt aaccgcatca ctgactataa cgtcgaactg
     2101 gtgaaataca gcctgaccgc caaaggtcac ggtaaagatg cgctgggtca ggtggatatt
     2161 gtcgccaact acaacggtcg ccgcttccac ggcgtcggcc tggccaccga tattgtcgag
     2221 tcctccgcca aagccatggt gcacgtactg aacaatatct ggcgtgccgc agaagtcgaa
     2281 aaagagttgc aacgcaaagc tcaacacaac gaaaacaaca aggaaaccgt gtgatgtcga
     2341 agaattacca tattgccgta ttgccggggg acggtattgg tccggaagtg atgacccagg
     2401 cgctgaaagt gctggatgcc gtgcgcaacc gctttgcgat gcgcatcacc accagccatt
     2461 acgatgtagg cggcgcagcc attgataacc acgggcaacc actgccgcct gcgacggttg
     2521 aaggttgtga gcaagccgat gccgtgctgt ttggctcggt aggcggtccg aaatgggaac
     2581 atttaccacc agaccagcaa ccagaacgcg gcgcgctgtt gcctttgcgt aagcacttca
     2641 aattattcag caacctgcgt ccggcaaaac tgtatcaggg gctggaagca ttctgtccgc
     2701 tgcgtgctga cattgccgct aacggcttcg acatcctgtg cgtgcgcgaa ctgaccggcg
     2761 gcatctattt cggtcagcca aaaggccgcg aaggtagcgg acagtatgaa aaagcgtttg
     2821 ataccgaggt gtatcaccgt tttgagatcg aacgtatcgc ccgcatcgcg tttgaatctg
     2881 cccgcaagcg tcgccacaaa gtcacctcaa tcgacaaagc caacgtgctg caatcctcta
     2941 ttttatggcg ggagatcgtt aacgagatcg ccacggaata cccggatgtc gaactggcgc
     3001 atatgtacat cgacaacgcc accatgcagc tgattaaaga tccatcacag tttgacgtcc
     3061 tgctgtgctc caacctgttt ggcgacattc tgtctgacga gtgcgcaatg atcactggct
     3121 cgatggggat gttgccttcc gccagcctga acgagcaagg ttttggtctg tatgaaccgg
     3181 caggcggctc agcaccagat atcacaggca aaaacatcgc caacccgatt gcgcaaattc
     3241 tgtcgctggc actgctgctg cgctacagcc tggatgccga tgatgcggct tgcgccattg
     3301 aacgcgccat taaccgcgca ttagaagaag gcattcgcac cggggattta gcccgtggcg
     3361 ctgccgccgt tagtaccgat gaaatgggcg atatcattgc ccgctatgtg gcagaagggg
     3421 tgtaatcatg gctaaaacgt tatacgaaaa attattcgac gctcacgtag tgtacgaagc
     3481 cgaaaacgaa accccgctgt tatatatcga ccgccacctg gtgcatgaag tgacctcacc
     3541 gcaggcgttc gatggtctgc gcgcccacgg tcgcccggta cgtcagccgg gcaaaacctt
     3601 cgccactatg gatcacaacg tctctaccca gacgaaagac attaatgcct gtggtgaaat
     3661 ggcgcgcatc cagatgcagg agctgattaa aaactgcaaa gaatttggcg tcgaactgta
     3721 tgacctgaat cacccgtatc aggggatcgt ccacgtaatg gggccggaac agggcgtcac
     3781 cttgccgggg atgaccattg tctgcggcga ctcgcatacc gccacccacg gcgcgtttgg
     3841 cgcactggcc tttggtatcg gcacttccga agttgaacac gtactggcaa cgcaaaccct
     3901 gaaacagggc cgcgcaaaaa ccatgaaaat tgaagtccag ggcaaagccg cgccgggcat
     3961 taccgcaaaa gatatcgtgc tggcaattat cggtaaaacc ggtagcgcag gcggcaccgg
     4021 gcatgtggtg gagttttgcg gcgaagcaat ccgtgattta agcatggaag gtcgtatgac
     4081 cctgtgcaat atggcaatcg aaatgggcgc aaaagccggt ctggttgcac cggacgaaac
     4141 cacctttaac tatgtcaaag gccgtttgca tgcgccgaaa ggcaaagatt tcgacgacgc
     4201 cgttgcctac tggaaaaccc tgcaaaccga cgaaggcgca actttcgata ccgttgtcac
     4261 tctgcaagca gaagaaattt caccgcaggt cacctggggc accaatccag gccaggtgat
     4321 ttccgtgaac gacaatattc ccgatccggc ttcgtttgcc gatccggttg aacgcgcgtc
     4381 ggcagaaaaa gcgctggcct atatggggct gaaaccgggc attccgctga ccgaagtggc
     4441 tatcgacaaa gtgtttatcg gttcctgtac caactcgcgc attgaagatt tacgcgcggc
     4501 agcggagatc gccaaagggc gaaaagtcgc gccaggcgtg caggcactgg tggttcccgg
     4561 ctctggccag gtaaaagccc aggcggaagc ggaaggtctg gataaaatct ttattgaagc
     4621 cggttttgaa tggcgcttgc ctggctgctc aatgtgtctg gcgatgaaca acgaccgtct
     4681 gaatccgggc gaacgttgtg catccaccag caaccgtaac tttgaaggcc gccaggggcg
     4741 cggcgggcgc acgcatctgg tcagcccggc aatggctgcc gctgctgctg tgaccggaca
     4801 tttcgccgac attcgcaaca ttaaataagg agcagaccat ggcagagaaa tttatcaaac
     4861 acacaggcct ggtggttccg ctggatgccg ccaatgtcga taccgatgca atcatcccga
     4921 aacagttttt gcagaaagtg acccgtacgg gttttggcgc gcatctgttt aacgactggc
     4981 gttttctcga tgaaaaaggc caacagccaa acccggactt cgtgctgaac ttcccgcagt
     5041 atcagggcgc ttccattttg ctggcacgag aaaacttcgg ctgtggctcc tcgcgtgagc
     5101 acgcgccctg ggcattgacc gactacggtt ttaaagtggt gattgcgccg agttttgctg
     5161 acatcttcta cggcaatagc tttaacaacc agctgctgcc ggtgaaatta agcgatgcag
     5221 aagtggacga actgtttgcg ctggtgaaag ccaatccggg gatccatttc gacgtggatc
     5281 tggaagcgca agaggtgaaa gcgggagaga aaacctatcg ctttaccatc gatgccttcc
     5341 gccgccactg catgatgaac ggtctggaca gtattgggct taccttgcag cacgacgacg
     5401 ccattgccgc ttatgaagca aaacaacctg cgtttatgaa ttaatcccct tgcccggtca
     5461 aatgaccggg ctttccgcta tcgtccacgt catcaaacgt ctttaacctt tgcggttaaa
     5521 aataatgcga caacagaaat aaccgcaatt acccagtaga cagcaaagtg cccccaactt
     5581 tgtgcaattg ctccctgaat aacgccagcc agaattaccc cggtagaaat actgttagta
     5641 aataaggtgg tagctgcccc cgctcttcca ggcattaaat cctgaaacca tagcatccca
     5701 atacccgcaa caatgccgat aaatacagcg ttaaaaagtt gcagcgtcat caacgccata
     5761 cggctatgaa agaaaatcaa tccggtgtaa aacagtactc ctgccgccac tgctatgacc
     5821 atcattcgcc gcttaccata acgtttgaca tagtagccag ccagaatcat tgctggtatt
     5881 tccagtccag ctgccgtccc catcaggaaa cccgccagtt tgtctggcaa tcctaactcg
     5941 ctactgatcc acaacggcat atcaataatg tacatggtgt tgcaggtcca cattaacgtc
     6001 gaggcgacaa ataacatccg tacgttacta tcctgccagc caccttgcat tgataaagca
     6061 ttttccgacg gcagttctac ccgcgccaca gacggaagca taaatgcaat caataccaga
     6121 ctgagtgtga atatcccggc ggcaatcgaa aacatcacca cttctcgcgc cgagttatcc
     6181 gcatattccc gcgccagagc aaataactgt ggcattgccg tattggccag agatgccaga
     6241 agcacaccac aggtgataag cgtcagataa tgacgattaa atgcaaacaa tggcgcattg
     6301 ccgatagcca tcaaacagca aaatataatc agttttcgcc gatcgccctg actgtcagaa
     6361 cgttttgcca accagaggct tacgccgatc ccagcaatag tattcaccgt ataaaagagt
     6421 ccgatccaga aaggttgcgc gccaacctca cgactcagaa ataagctcaa tgtaggagcc
     6481 tgtagcgccc cggccacccc catcataaaa gcgaccagca taaatgccgc gtaaacaccg
     6541 ttcatacggc gagccatcgt cattatccag atcatacgtt ccctttttag cgcggcgaga
     6601 ataaaaaaaa ccagcaggta taatctgctg gcgggtgatt ttacaccaat actcagtcac
     6661 acatgatgca ggcaagtcaa ctttcagaat tgcggtcatc ccactgcatc agtccttcaa
     6721 gcatggttaa tcgttgtggg acgcttaacc aacgcaacca gcacaacttc gctgtcgcgg
     6781 taaaatagtg ctgataaaac tgacgcatgg ggcacctcct tgcttcatcg ttaggaatta
     6841 ttgacttaat atagggaaaa taaaattgct gtcttttgcg caggagttcc ccttttatgc
     6901 catctgctcg tctgcaacaa cagttcatcc gcctgtggca atgctgcgag ggtaaatcgc
     6961 aggacacaac gctcaacgaa ctggcagcgt tattgagctg ctcgcgtcgt catatgcgta
     7021 ccctgctcaa caccatgcag gatcgcggct ggctgacgtg ggaagcggaa gtcgggcgcg
     7081 gtaaacgctc gcgtctgaca ttcctctata ccgggctggc gcttcagcaa cagcgggcgg
     7141 aagacctgct ggagcaggat cgtatcgacc aactagtgca gttggttggc gacaaagcga
     7201 ctgtgcggca aatgctggtt tctcatctgg gccgcagctt ccgccagggg cggcacatcc
     7261 tgcgcgtgct ctactatcgt ccgttgcgta atctgctacc tggcagcgca ttgcgccgtt
     7321 ccgaaaccca tattgcccgg caaatcttca gttcgctaac gcgcataaat gaggaaaatg
     7381 gggaactgga agcagacatc gcccaccact ggcagcaaat atcaccgctt cactggcgtt
     7441 tctttttgcg tccaggagtc cattttcatc atggtcgtga actggaaatg gacgacgtga
     7501 tcgcctcttt aaaacgaatc aatacgctgc cgctctattc gcatattgcg gacattgtgt
     7561 cgccgacgcc ctggacgctg gatatccatc tcacgcaacc ggaccgctgg ttaccgttac
     7621 tgctggggca agttccggcg atgatcctgc cgcgcgaatg ggaaaccctc agtaactttg
     7681 ccagccatcc catcggcacc ggtccgtatg cggtgatccg caacaccacc aatcaactga
     7741 aaattcaggc attcgatgac ttcttcggtt accgggcatt aatcgatgaa gttaacgtct
     7801 gggttctgcc ggaaattgcc gacgagccag ctggaggtct gatgctaaaa ggtccacagg
     7861 gtgaggaaaa agagattgaa agccgcctgg aggaaggttg ctactattta ctattcgaca
     7921 gccgcaccca tcgcggagcg aatcagcaag tcagggactg ggtaaactat gtgctttctc
     7981 caactaatct ggtctatttc gctgaggaac agtaccagca actgtggttc ccggcttatg
     8041 gactgctccc ccgttggcac catgcccgca ccataaagag cgaaaaaccg gctggcctgg
     8101 aaagcctcac cctgaccttt tatcaggatc acagtgagca tcgggtgatt gccgggatca
     8161 tgcagcagat tctggcaagt caccaggtca cgctggaaat caaagagatc agctacgatc
     8221 agtggcatga aggagagatc gagagcgata tctggcttaa tagcgccaac tttacgctgc
     8281 cgctggattt ttcgctgttc gcgcacttgt gcgaggtgcc gctgctccaa cactgtattc
     8341 cgatcgactg gcaagccgac gccgcccgct ggcgcaatgg cgaaatgaac ctggcgaact
     8401 ggtgccagca actggtcgcc agtaaagcaa tggtgccgct tatccaccac tggctgatca
     8461 ttcagggaca acgcagtatg cgcggcctgc gtatgaatac cctcggctgg ttcgatttta
     8521 aatcagcgtg gtttgcgccg ccggatccat gattgctggt agataacaaa atcactacac
     8581 taacgccgtt ctcaacgggg tgccacgcaa acgcgtgcgc tgagaaaata cccgtcgaac
     8641 ctgatccgga taacgccggc gaagggattt gaggctcctt ctcaagtcct ttgccactct
     8701 tttttgaggt gcaaagtgtt aaaaaaatgt cttcccctgc tgttgctgtg cacagcgccc
     8761 gttttcgcta aacccgttct gactgtttat acctacgatt ccttcgccgc cgactggggg
     8821 cctggtccaa agatcaaaaa agcttttgaa gccgactgta actgcgaact gaaactggtg
     8881 gcgctggaag atggcgtttc gcttctcaac cgtctacgga tggaaggcaa aaatagtaaa
     8941 gccgatgtgg tgctggggct ggataacaat ctgttagacg ccgccagtaa aaccggacta
     9001 tttgccaaaa gcggtgtggc agcggatgcc gttaacgttc ccggcggctg gaataatgac
     9061 actttcgtcc cgtttgatta cggctatttc gccttcgtct atgacaagaa caaactgaaa
     9121 aacccgccgc aaagcctgaa agaattggtt gagagcgatc aaaactggcg ggtgatttat
     9181 caggatccgc gcaccagtac gccggggctg ggcctgctgt tgtggatgca aaaagtctat
     9241 ggcgatgacg ccccacaagc ctggcaaaaa ctggcgaaga aaaccgtcac ggtcaccaaa
     9301 ggctggagcg aagcctacgg cctgttttta aaaggtgaaa gcgatctggt actgagttac
     9361 accacctctc cggcttatca cattctcgaa gagaaaaaag ataactacgc cgccgcgaac
     9421 tttagcgaag gtcactatct gcaggtggaa gtcgccgccc gcaccgctgc cagcaagcag
     9481 ccggagctgg cgcaaaaatt cctccagttt atggtttctc cggcttttca gaatgcgatc
     9541 ccaaccggta actggatgta tccggtggca aatgtcacgc tgcctgccgg gtttgaacaa
     9601 ttgaccaaac cggccaccac gctggagttc acaccagctg aagtggcggc acaacgtcag
     9661 gcatggatta gcggatggca acgcgccgtc agccgttaat tcccggctgg ttaattccag
     9721 gtgtaagcgc cgccacgctg gtggtagcgg ttgcgctcgc ggcgtttctc gccctgtggt
     9781 ggaacgcgcc gcagggtaac tgggtggcag tctggcagga cagctacctg tggcatgtgg
     9841 tgcgcttctc cttctggcag gcgtttctct cggcgctact ctctgtcgta cccgcgatat
     9901 tcctcgcccg cgccctctat cgcaggcgct ttccgggtcg gctggcgctg ttgcgtctgt
     9961 gcgcaatgac cttgatcctc ccggtgctgg ttgctgtttt cggcattctt agcgtctatg
    10021 gtcgccaggg ctggctggca tcgctctgcc aatcgctcgg tctggagtgg accttttcgc
    10081 cctacggcct gcaaggtatt ttgctggcgc acgtattttt taatctgccg atggcgagcc
    10141 gcttattact ccaggcactg gaaaacattc ccgacgaaca acgtcagctt gccgcccagc
    10201 ttgggatgcg cggctggcat tttttccgct tcgtcgaatg gccgtggtta cggcgacaaa
    10261 tcccgccggt tgctgcactt atctttatgc tctgtttcgc cagcttcgcc accgtgctat
    10321 cactgggcgg cggtccgcag gcgaccacta tcgagctggc tatttatcag gcgctgagtt
    10381 acgactacga tcctgcccgc gcggcgatgc tggcgctgat ccagatggtg tgttgccttg
    10441 ggctggtact gttgagtcag cgattgagta aggccattgc gccaggcacc acgctgctgc
    10501 aaggctggcg cgacccggac gatcgtctgc atagccgcat ttgcgacacg gtgttaatag
    10561 tgctggcgtt gctgctgttg ttgccaccgt tgctggcggt gatcgtcgat ggggtaaatc
    10621 gccagttgcc ggaagtgctg gcacaaccgg tgctgtggca ggcgctgtgg acctcgttgc
    10681 gtattgcgct ggcggcaggt gtattgtgcg tagtgctgac catgatgctg ctatggagca
    10741 gtcgcgaact tcgggcacgg cagaaaatgc tggcgggtca ggcgctggag atgagcggca
    10801 tgttgattct cgccatgccg gggattgtgc tggctaccgg cttcttttta ctgctcaaca
    10861 acactatcgg cctgcaacaa tctgctgacg gcattgtgat tttcaccaat gcgttaatgg
    10921 cgatccctta tgcgctgaaa gtactggaaa acccgatgcg cgatatcacc gcccgctaca
    10981 gtatgttgtg tcagtcgctg ggcattgaag gctggtcgcg cttaaaagtg gtggagctgc
    11041 gcgccctgaa acgtccactg gcgcaggcgc tggcctttgc ctgcgtgctg tcgattggtg
    11101 attttggcgt ggtggcgttg ttcggtaacg atgatttccg taccctgccg ttttatctct
    11161 accagcaaat tggctcctat cgcagccagg acggcgcggt caccgcgtta attctgctgc
    11221 tactctgttt tctgctgttt accgtgattg aaaaactacc ggggcgaaat gttaaaactg
    11281 actgatatca cctggcttta ccaacatttg ccgatgcgtt ttagcttaac ggtggaacgc
    11341 ggcgagcagg tggcgatcct cgggccaagc ggcgcaggta aaagtaccct gctgaatttg
    11401 attgccggtt ttctgacgcc agccagcggt tcgctgacta tcgatggcgt tgatcacacc
    11461 acgacgccgc cgtcacgccg tccggtgtcg atgctgtttc aggagaacaa cctgttcagc
    11521 cacctgacgg tcgcgcagaa catcgggctg gggcttaatc caggattgaa gctgaacgcg
    11581 gcacagcagg agaaaatgca cgctatcgcc cgtcagatgg ggattgataa tttaatggcg
    11641 cggttaccgg gcgagctttc cggcggccag cgacagcgcg tggcgttagc gcgttgtctg
    11701 gtgcgcgaac agccgatttt attgctcgat gaaccgttct ctgcgctcga tccggcgtta
    11761 cgtcaggaga tgctgacgct ggtgagcacg agctgccagc agcaaaaaat gacgctattg
    11821 atggtgtcgc acagtgtgga agatgcggcg cggatcgcca cacgctcggt ggtggtcgcc
    11881 gacgggcgca tcgcctggca gggtaagact gaagaattgt tgagcggtaa ggcgagtgct
    11941 tcggcaatat tggggattac gggttagtat gcactgtcag atgcggcgtg aacaccttat
    12001 ccgacctacg gacagtgcgt tttgtaggcc tgataagacc ggtcagcgtc gcatcaggca
    12061 acccgcacaa gacaatcccc taaaccccaa ccactttacg caaaatatcg atatacaccg
    12121 gcatcaacgg gtggcgaatt aacaccacca gcgccaccac gccgatggca gaaatcaacg
    12181 gcgtcagcca caacaaacgg ccgcgcgaca aataatgact taaacgatcg gttgctttac
    12241 cgctgcgcca taaccgccag cacagccagc caccaaccca caaaaatacc gccgtcgcca
    12301 gcagcaacca tttaaactcg ccgctctgca ttccggctgg aatatcgatc gccgcgcccg
    12361 ccagaatccc aggcaggaag taaaacggtg gccacagcag gcagccgata atattcggcg
    12421 taatgaattt tgccaccggc agatccagca ttcccgccac cattggcacc agcggacgcg
    12481 tcgggccaac aaagcgaccg accagaatgg tgaacatgct gtgttgatgc aacgcatgtt
    12541 cagttttatc gagtaatgct ttgtttttct tcagaaatga ccagcgatgc aacggctttt
    12601 taaaacgcca gcccagccag aaggagatcc agtcgcccag cagacaaccg acaatccctg
    12661 ccagccaggc gtgccagaaa cttaactcgc cgctgccaat cagcgctccc agccccgcca
    12721 tcagcaccgt accgggtaga atcaaaccga ccagcgccag cgactccaga aaggccacca
    12781 acaccaccgc catcaatgaa tacacggtag attgggtaat aaagtgttcc agcaatgctt
    12841 gcataatgtg cctgtcaaat ggacgaagca gggattctgc aaaccctatg ctactccgtc
    12901 aagccgtcaa ttgtctgatt cgttaccaat tatgacaact tgacggctac atcattcact
    12961 ttttcttcac aaccggcacg gaactcgctc gggctggccc cggtgcattt tttaaatacc
    13021 cgcgagaaat agagttgatc gtcaaaacca acattgcgac cgacggtggc gataggcatc
    13081 cgggtggtgc tcaaaagcag cttcgcctgg ctgatacgtt ggtcctcgcg ccagcttaag
    13141 acgctaatcc ctaactgctg gcggaaaaga tgtgacagac gcgacggcga caagcaaaca
    13201 tgctgtgcga cgctggcgat atcaaaattg ctgtctgcca ggtgatcgct gatgtactga
    13261 caagcctcgc gtacccgatt atccatcggt ggatggagcg actcgttaat cgcttccatg
    13321 cgccgcagta acaattgctc aagcagattt atcgccagca gctccgaata gcgcccttcc
    13381 ccttgcccgg cgttaatgat ttgcccaaac aggtcgctga aatgcggctg gtgcgcttca
    13441 tccgggcgaa agaaacccgt attggcaaat attgacggcc agttaagcca ttcatgccag
    13501 taggcgcgcg gacgaaagta aacccactgg tgataccatt cgcgagcctc cggatgacga
    13561 ccgtagtgat gaatctctcc tggcgggaac agcaaaatat cacccggtcg gcaaacaaat
    13621 tctcgtccct gatttttcac caccccctga ccgcgaatgg tgagattgag aatataacct
    13681 ttcattccca gcggtcggtc gataaaaaaa tcgagataac cgttggcctc aatcggcgtt
    13741 aaacccgcca ccagatgggc attaaacgag tatcccggca gcaggggatc attttgcgct
    13801 tcagccatac ttttcatact cccgccattc agagaagaaa ccaattgtcc atattgcatc
    13861 agacattgcc gtcactgcgt cttttactgg ctcttctcgc taacccaacc ggtaaccccg
    13921 cttattaaaa gcattctgta acaaagcggg accaaagcca tgacaaaaac gcgtaacaaa
    13981 agtgtctata atcacggcag aaaagtccac attgattatt tgcacggcgt cacactttgc
    14041 tattccatag catttttatc cataagatta gcggatccta cctgacgctt tttatcgcaa
    14101 ctctctactg tttctccata cccgtttttt tggatggagt gaaacgatgg cgattgcaat
    14161 tggcctcgat tttggcagtg attctgtgcg agctttggcg gtggactgcg ccagcggtga
    14221 agagatcgcc accagcgtag agtggtatcc ccgttggcaa aaagggcaat tttgtgatgc
    14281 cccgaataac cagttccgtc atcatccgcg tgactacatt gagtcaatgg aagcggcact
    14341 gaaaaccgtg cttgcagagc ttagcgtcga acagcgcgca gctgtggtcg ggattggcgt
    14401 tgacagtacc ggctcgacgc ccgcaccgat tgatgccgac ggtaacgtgc tggcgctgcg
    14461 cccggagttt gccgaaaacc caaacgcgat gttcgtattg tggaaagacc acactgcggt
    14521 tgaagaagcg gaagagatta cccgtttgtg ccacgcgccg ggcaacgttg actactcccg
    14581 ctacattggt ggtatttatt ccagcgaatg gttctgggca aaaatcctgc atgtgactcg
    14641 ccaggacagc gccgtggcgc aatctgccgc atcgtggatt gagctgtgcg actgggtgcc
    14701 agctctgctt tccggtacca cccgcccgca ggatattcgt cgcggacgtt gcagcgccgg
    14761 gcataaatct ctgtggcacg aaagctgggg cggcttgccg ccagccagtt tctttgatga
    14821 gctggacccg atcctcaatc gccatttgcc ttccccgctg ttcactgaca cctggactgc
    14881 cgatattccg gtgggcacct tatgcccgga atgggcgcag cgtctcggcc tgcctgaaag
    14941 cgtggtgatt tccggcggcg cgtttgactg ccatatgggc gcagttggcg caggcgcaca
    15001 gcctaacgca ctggtaaaag ttatcggtac ttccacctgc gacattctga ttgccgacaa
    15061 acagagcgtt ggcgagcggg cagttaaagg tatttgcggt caggttgatg gcagcgtggt
    15121 acctggattt atcggtctgg aagcaggcca atcggcgttt ggtgatatct acgcctggtt
    15181 tggtcgcgta ctcggctggc cgctggaaca gcttgccgcc cagcatccgg aactgaaagc
    15241 gcaaatcaac gccagccaga aacaactgct tccggcgctg accgaagcat gggccaaaaa
    15301 tccgtctctg gatcacctgc cggtggtgct caactggttt aacggccgcc gcacaccgaa
    15361 cgctaaccaa cgcctgaaag gggtgattac cgatcttaac ctcgctaccg acgctccgct
    15421 gctgtttggc ggtttgattg ctgccaccgc ctttggcgca cgcgcaatca tggagtgctt
    15481 taccgatcag gggatcgccg tcaataacgt gatggcgctg ggcggcatcg cgcggaaaaa
    15541 ccaggtcatt atgcaggcct gctgcgacgt gctgaatcgc ccgctgcaaa ttgttgcctc
    15601 tgaccagtgc tgtgcgctcg gtgcggcgat ttttgctgcc gtcgccgcga aagtgcacgc
    15661 agacatccca tcagcccagc aaaaaatggc cagtgcggta gagaaaaccc tgcaaccgcg
    15721 cagcgaacag acacaacgct ttgaacagct ttatcgccgc tatcagcaat gggcgatgag
    15781 cgccgaacaa cactatcttc caacttccgc cccggcacag gctgcccagg ccgttccgac
    15841 tctataagga cacgataatg acgatttttg ataattatga agtgtggttt gtcattggca
    15901 gccagcatct gtatggcccg gaaaccctgc gtcaggtcac ccaacatgcc gagcacgttg
    15961 ttaatgcgct gaatacggaa gcgaaactgc cctgcaaact ggtgttgaaa ccgctgggca
    16021 ccacgccgga tgaaatcacc gctatttgcc gcgacgcgaa ttacgacgat cgttgcgctg
    16081 gtctggtggt gtggctgcac accttctccc cggccaaaat gtggatcaac ggcctgacca
    16141 tgctcaacaa accgttgctg caattccaca cccagtttaa cgcggcgctg ccgtgggaca
    16201 gtatcgatat ggactttatg aacctgaacc agactgcaca tggcggtcgc gagttcggct
    16261 tcattggcgc gcgtatgcgt cagcaacatg ccgtggttac cggtcactgg caggataaac
    16321 aagcccatga gcgtatcggc tcctggatgc gtcaggcggt ctctaaacag gatacccgtc
    16381 atctgaaagt ctgccgtttt ggcgataaca tgcgtgaagt agcggtcacc gatggtgata
    16441 aagttgccgc acagatcaag ttcggtttct ccgtcaatac ctgggcggtt ggcgatctgg
    16501 tgcaggtggt gaactccatc agcgacggcg atgttaacgc gctggtcgat gagtacgaaa
    16561 gctgctacac catgacgcct gccacacaaa tccacggcga aaaacgacag aacgtgctgg
    16621 aagcggcgcg tattgagctg gggatgaagc gtttcctgga acaaggtggc ttccacgcgt
    16681 tcaccaccac ctttgaagat ttgcacggtc tgaaacagct tccaggtctg gccgtacagc
    16741 gtctgatgca gcagggttac ggctttgcgg gcgaaggcga ctggaaaacc gccgccctgc
    16801 ttcgcatcat gaaggtgatg tcaaccggtc tgcagggcgg cacctccttt atggaggact
    16861 acacctatca cttcgagaaa ggtaatgacc tggtgctcgg ctcccatatg ctggaagtct
    16921 gcccgtcgat tgccgtagaa gagaaaccga tcctcgacgt tcagcatctc ggtattggtg
    16981 gtaaggacga tcctgcccga ctgatcttca atacccaaac cggtccagcg attgtcgcca
    17041 gcctgattga tctcggcgat cgttaccgtc tgctggttaa ctgtatcgac acggtgaaaa
    17101 caccgcactc cctgccgaaa ctgccggtgg cgaatgcgct gtggaaagcg caaccggatc
    17161 tgccaactgc ttccgaagcg tggatcctcg ctggtggcgc gcaccatacc gtcttcagcc
    17221 atgcgctgaa cctcaacgat atgcgtcagt tcgccgagat gcacgacatt gaaatcacgg
    17281 tgattgataa cgacacccgc ctgccagcgt ttaaagacgc actgcgctgg aacgaagtgt
    17341 attacggatt tcgtcgctaa gtagccacat caggtatgta acgcctgatg cgacgctgac
    17401 gcgtcttatc tggcctacac gctgcgattt tgtaggccgg ataagcaaag cgcatccggc
    17461 attcaacgcc tgatgcgacg ctggcgcgtc ttatcaggcc tacgcgctgc gattttgtag
    17521 accggataag cgaagcgcat ccggcacgaa ggagtcaaca tgttagaaga tctcaaacgc
    17581 caggtattag aagccaacct ggcgctgcca aaacacaacc tggtcacgct cacatggggc
    17641 aacgtcagcg ccgttgatcg cgagcgcggc gtctttgtga tcaaaccttc cggcgtcgat
    17701 tacagcgtca tgaccgctga cgatatggtc gtggttagca tcgaaacagg tgaagtggtt
    17761 gaaggtacga aaaagccctc ctccgacacg ccaactcacc ggctgctcta tcaggcattc
    17821 ccctccattg gcggcattgt gcatacgcac tcgcgccacg ccaccatctg ggcgcagtcg
    17881 ggtcagtcga ttccagcaac cggcaccacc cacgccgact atttctacgg caccattccc
    17941 tgcacccgca aaatgaccga cgcagaaatc aacggcgaat atgagtggga aaccggtaac
    18001 gtcatcgtag aaacctttga aaaacagggt atcgatgcag cgcaaatgcc cggcgttctg
    18061 gtccattccc acggcccgtt tgcatggggc aaaaatgccg aagatgcggt gcataacgcc
    18121 atcgtgctgg aagaggtcgc ttatatggag atattctgcc gtcagttagc gccgcagtta
    18181 ccggatatgc agcaaacgct gctggataaa cactatctgc gtaagcatgg cgcgaaggca
    18241 tattacgggc agtaatgact gtataaaacc acagccaatc aaacgaaacc aggctatact
    18301 caagcctggt tttttgatgg attttcagcg tggcgcaggc aggttttatc ttaacccgac
    18361 actggcggga caccccgcaa gggacagaag tctccttctg gctggcgacg gacaacgggc
    18421 cgttgcaggt tacgcttgca ccgcaagagt ccgtggcgtt tattcccgcc gatcaggttc
    18481 cccgcgctca gcatattttg cagggtgaac aaggctttcg cctgacaccg ctggcgttaa
    18541 aggattttca ccgccagccg gtgtatggcc tttactgtcg cgcccatcgc caattgatga
    18601 attacgaaaa gcgcctgcgt gaaggtggcg ttaccgtcta cgaggccgat gtgcgcccgc
    18661 cagaacgcta tctgatggag cggtttatca cctcaccggt gtgggtcgag ggtgatatgc
    18721 acaatggcac tatcgttaat gcccgtctga aaccgcatcc cgactatcgt ccgccgctca
    18781 agtgggtttc tatagatatt gaaaccaccc gccacggtga gctgtactgc atcggcctgg
    18841 aaggctgcgg gcagcgcatc gtttatatgc tggggtcgga gaatggcgac gcctcctcgc
    18901 ttgatttcga actggaatac gtcgccagcc gcccgcagtt gctggaaaaa ctcaacgcct
    18961 ggtttgccaa ctacgatcct gatgtgatca tcggttggaa cgtggtgcag ttcgatctgc
    19021 gaatgctgca aaaacatgcc gagcgttacc gtcttccgct gcgtcttggg cgcgataata
    19081 gcgagctgga gtggcgcgag cacggcttta aaaacggcgt cttttttgcc caggctaaag
    19141 gtcggctaat tatcgacggt atcgaggcgc tgaaatccgc gttctggaat ttctcttcat
    19201 tctcgctgga aactgtcgct caggagctat taggcgaagg aaaatctatc gataacccgt
    19261 gggatcgaat ggacgaaatt gaccgccgtt tcgccgaaga taaacctgcg ctggcaactt
    19321 ataacctgaa agattgcgag ctggtgacgc agatcttcca caaaactgaa atcatgccat
    19381 ttttactcga acgggcaacg gtgaacggcc tgccggtgga ccgacacggc ggttcggtgg
    19441 cggcatttgg tcatctctat tttccgcgaa tgcatcgcgc tggttatgtc gcgcctaatc
    19501 tcggcgaagt gccgccgcac gccagccctg gcggctacgt gatggattca cggccagggc
    19561 tttatgattc agtgctggtg ctggactata aaagcctgta cccgtcgatc atccgcacct
    19621 ttctgattga tcccgtcggg ctggtggaag gcatggcgca gcctgatcca gagcacagta
    19681 ccgaaggttt tctcgatgcc tggttctcgc gagaaaaaca ttgcctgccg gagattgtga
    19741 ctaacatctg gcacgggcgc gatgaagcca aacgccaggg taacaaaccg ctgtcgcagg
    19801 cgctgaaaat catcatgaat gccttttatg gcgtgctcgg caccaccgcc tgccgcttct
    19861 tcgatccgcg gctggcatcg tcgatcacca tgcgtggtca tcagatcatg cggcaaacca
    19921 aagcgttgat tgaagcacag ggctacgacg ttatctacgg cgataccgac tcaacgtttg
    19981 tctggctgaa aggcgcacat tcggaagaag aagcggcgaa aatcggtcgt gcactggtgc
    20041 agcacgttaa cgcctggtgg gcggaaacgc tgcaaaaaca acggctgacc agcgcattag
    20101 aactggagta tgaaacccat ttctgccgtt ttctgatgcc aaccattcgc ggagccgata
    20161 ccggcagtaa aaagcgctac gccgggctga ttcaggaggg cgataaacag cggatggtgt
    20221 ttaaagggct ggaaaccgtg cgcaccgact ggacgccgct ggcccagcag tttcagcagg
    20281 agctatacct gcgcatcttc cgcaacgagc catatcagga atatgtacgc gaaaccatcg
    20341 acaaactgat ggcgggtgaa ctggatgcgc gactggttta ccgtaaacgc cttcgccgtc
    20401 cgctgagcga gtatcagcgt aatgtgccgc ctcatgtacg cgccgctcgc cttgccgatg
    20461 aagaaaacca aaagcgtggt cgccccttgc aatatcagaa tcgcggcacc attaagtacg
    20521 tatggaccac caacggcccg gagccgctgg actaccaacg ttcaccactg gattacgaac
    20581 actatctgac ccgccagcta caacccgtgg cggagggaat actccctttt attgaggata
    20641 attttgctac acttatgacc gggcaacttg ggctattttg agcaaaaaaa gagttcgcca
    20701 gataccattt tgatgcgtga cgaatgcttt gccatccagt accatagcgc cctttccatt
    20761 cctggacctg aataacacca ctacctcata agcacggtag cgggtggtta ttgcctgcaa
    20821 ttaaagatat agagccgaac acatatgcct tttacacttg gtcaacgctg gatcagcgat
    20881 acagaaagcg aattgggact tggaaccgtt gtcgcggtgg atgcgcgaac tgtcacttta
    20941 cttttcccat ctactggtga aaaccgtctg tacgcacgca gtgattcccc cgtgacccgc
    21001 gtgatgttca accctggtga taccattacc agccatgacg gctggcagat gcaagtcgaa
    21061 gaagtaaaag aagaaaatgg cttgctgacc tatatcggta ctcgcctgga tactgaagag
    21121 tccggcgtag ccctgcgtga agttttcctt gatagcaaac tggtgttcag caaaccgcag
    21181 gaccgcctgt ttgccgggca gattgaccgt atggaccgct ttgcgctgcg ttatcgcgcg
    21241 cgtaagtatt ccagcgaaca gttccgtatg ccgtacagcg gcctgcgcgg tcagcgtacc
    21301 agcctgatcc cgcaccagct caacatcgct catgatgttg gccgccgcca cgcgccgcgc
    21361 gtcctgctgg ctgacgaagt gggtttaggg aaaaccattg aagccgggat gatcctgcat
    21421 cagcaactgc tctctggcgc tgctgaacgt gtgctgatta tcgtcccgga aaccttacag
    21481 catcagtggc tggtagaaat gctgcgccgt ttcaacctgc gctttgctct gtttgatgat
    21541 gagcgttatg ccgaagctca gcacgatgct tacaacccgt tcgacaccga acagctggtg
    21601 atttgctcgc tggattttgc ccgtcgtagc aaacagcgcc tggaacatct ctgtgaagcc
    21661 gaatgggacc tgctggtggt cgatgaagcg catcacctgg tgtggagcga agatgcgcca
    21721 agccgtgaat atcaggccat tgaacaactg gcagagcaca tgccgggcgt tctgctgctg
    21781 accgcgaccc cggaacagct ggggatggaa agccacttcg cccgtctgcg tctgctggac
    21841 ccgaaccgtt tccacgattt tgcgcagttc gttgaagagc agaaaaatta tcgtccggtt
    21901 gcggacgccg ttgccatgct gctggcaggt aacaaactga gcaatgacga actgaacatg
    21961 ctcggcgaga tgatcggcga gcaggatatc gagccgctgt tgcaggcagc aaacagcgac
    22021 agcgaagatg cccagagcgc ccgtcaggag ctggtttcga tgctgatgga tcgccacggc
    22081 accagccgcg tgctgttccg taacacgcgt aacggtgtga aaggattccc gaaacgcgag
    22141 ctgcacacca ttaagctgcc gctaccgacg cagtatcaga cggctattaa agtctccggc
    22201 attatgggcg cacgtaaaag tgcggaagat cgtgctcgcg atatgctcta cccggagcgt
    22261 atttatcagg aatttgaagg tgataacgcc acctggtgga acttcgatcc gcgcgttgag
    22321 tggctgatgg gctacctgac cagccatcgc tctcagaaag tgctggtgat ctgcgccaaa
    22381 gctgccactg cgctgcaact ggagcaggta ctgcgcgaac gtgaaggtat tcgcgctgcg
    22441 gtgttccacg aaggtatgtc gattatcgaa cgtgaccgcg ctgccgcctg gtttgccgaa
    22501 gaagacaccg gcgcacaggt actgctgtgc tcagaaatcg gttctgaagg acgtaacttc
    22561 cagttcgcca gccacatggt gatgtttgac ctgccattca acccggatct actggagcag
    22621 cgtattggtc gtctggatcg tatcggccag gcgcacgata ttcagatcca tgtgccttat
    22681 ctggagaaaa ccgctcagtc ggtgctggtg cgctggtatc acgaaggtct ggatgcattt
    22741 gagcacacct gcccgaccgg acgcactatt tacgatagcg tatacaacga tctgattaac
    22801 tatctggctt caccggatca aaccgaaggc tttgacgatc tgatcaaaaa ctgccgcgag
    22861 caacatgaag cgctgaaagc acagctggaa cagggtcgtg accgcctgct ggaaatccac
    22921 tccaacggtg gcgaaaaagc ccaggcactg gcagaaagca ttgaagagca ggatgacgat
    22981 accaacctga tcgccttcgc catgaacctg ctcgatatta tcggtatcaa tcaggacgat
    23041 cgcggcgaca acatgatcgt gctgacgccg tccgatcata tgctggtgcc ggacttccct
    23101 ggcctgtcgg aagatggcat caccatcacc tttgatcgtg aagtggcgct ggcgcgtgaa
    23161 gatgcacagt ttattacctg ggagcatccg ctgatccgca acggtctgga tctgatcctt
    23221 tctggcgata ccggtagcag cacgatttca ctgttaaaaa acaaagcgtt gccggtaggt
    23281 acgctgttgg tggaactgat ttatgtggtt gaagcccagg ctccgaagca gttgcagctc
    23341 aaccgcttcc tgccaccgac gccggtacgt atgctgctgg ataaaaacgg caacaacctg
    23401 gcggcgcagg tagagtttga aacctttaac cgccagctta acgcggttaa ccgtcacacc
    23461 ggcagcaaac tggttaacgc cgtgcagcag gatgttcacg ctatccttca actgggtgaa
    23521 gcgcagatcg agaaatctgc ccgtgcattg attgatgcag cgcgtaacga agccgacgaa
    23581 aaactgtctg ccgagctgtc tcgtctggaa gctctgcgtg cagtgaaccc gaacattcgt
    23641 gacgacgaac tgaccgccat tgagagcaac cgtcagcagg taatggaaag cctggatcag
    23701 gcaggttggc gtctggatgc cctgcgtttg atcgttgtaa cgcatcagta acggagccga
    23761 aaatggggat ggaaaactac aatccaccgc aggaaccctg gttggttatc ctgtatcagg
    23821 atgaccacat tatggtggtt aacaagccga gcggtttgtt gtctgtgccg gggcgtctgg
    23881 aagagcacaa agacagcgtg atgacgcgca ttcagcgtga ttatccgcag gcagaatcgg
    23941 tgcatcgtct ggatatggct accagcggcg tgattgtagt ggcgctgacc aaagccgcgg
    24001 agcgggagtt aaaacgccag ttccgcgagc gcgagccgaa aaagcagtat gtggcccgcg
    24061 tctgggggca tccatcccct gcggaaggtc tggtggatct gccgctgatt tgcgactggc
    24121 caaaccgccc gaaacagaaa gtctgttacg aaacgggtaa acctgcgcag acggaatatg
    24181 aagtggtgga gtatgcggcg gataacacgg caagagtggt gttaaaaccg attactgggc
    24241 gttcgcatca attgcgtgtg catatgctgg cgctggggca tccgattctc ggcgatcgtt
    24301 tttatgcatc accagaagcg agagcgatgg caccgcgttt gttgctacat gcagagatgt
    24361 tgacgattac ccatccggcg tatggcaata gtatgacgtt taaagcgcca gcggattttt
    24421 aatagtcacg ctggcgcagt tcggtaggcg gataaggcgt tcacgccgaa tccggcaatt
    24481 gtgcgccgat tgcctgatgc gacgcgggcc gcgtcttatc aggcctacag tttaaaactt
    24541 atttaaaccc tttctgctgc tttatcagct catatgcctg ctgaatttcc tgcgctttct
    24601 gcttcgccat ctccatcatc tcaggcggca aacctttcgc caccagctta tcgggatggt
    24661 gttcactcat cagcttacgg taggctcgtt taatggtggt cgcatcatcc gtcggcttca
    24721 cacccagcac attacaggca tcttccagcg tcgggccacg ctgcgcttgc tgccagttac
    24781 caccgccaga ttgctgctga taaccgccgc caaactgtgc accgccctgc atcatgcgca
    24841 aaaactggtc aaactgggcg cgggagatcc ctaattcttc tgcaatgaca tacagcaccg
    24901 cccgttcatt cgggtgcagt gaaccatcag caaacgccgc ctgaatctgg atctccagaa
    24961 acatacgaat taagtcaaaa cgaccaaagc agacactgcg aaactggcgc atcttttcgc
    25021 gcagcgggta attgtctgat tttcccaccc ggaacgcgtt ttgcgccgca gtacgggaag
    25081 cgccatgaag gttcattcgg tccatcagct ggctggcgat atgaatatca gcctccgtga
    25141 cgcgaccttt ggatttggtt aaatgcccca tcacttcaaa agtggtggca aaaaacagcg
    25201 cctgacgctc acgctggttg gcgaaccacg ccattttacg gctacgggct ttatcaaaca
    25261 tatggccaat taacaggcct aacactacgc cccaaaagcc gccgcccatc agtaaggcca
    25321 cggccacgcc aatgattttt ccccaatact gcatatattc cccaaatcga cacacggata
    25381 tcagggctat ctcccacaat ataaaggtgc ttttaccgtt ttccggctgc agtcaattgt
    25441 gggacatcgc ctataatttg cattatcata cctgtcattc aatgccgtgc ctaacaccac
    25501 tgacgctatt cggacaggat taacactagc gtagagatga cgagtacgtt agtctctgac
    25561 cgtttgtcac gcgcaacgtt accgatgatg gaacaataaa atcaacgtat gaaaaaacgt
    25621 atccccactc tcctggccac catgattgcc accgcccttt atagtcaaca gggactggca
    25681 gccgacctcg cctcacagtg catgttgggc gtgccaagct atgaccgtcc tctggtacag
    25741 ggcgatacca atgacttacc cgtgactatc aatgctgacc acgcgaaagg ggactacccg
    25801 gatgacgccg tgtttactgg cagcgtggat atcatgcagg gtaacagccg tctgcaggcc
    25861 gacgaagtgc agctccatca aaaagaggca ccaggacaac cggagccggt acgaaccgtt
    25921 gatgcgctcg gtaatgtcca ttacgacgat aaccaggtga tcctcaaagg gccgaaaggc
    25981 tgggcgaatc tgaacaccaa agataccaac gtctgggaag gtgattacca gatggtgggt
    26041 cgccagggcc gcggtaaagc ggacctgatg aaacaacgtg gtgaaaaccg ctataccatt
    26101 ctggataacg gtagctttac ctcctgtctg ccgggttctg acacctggag cgtggtaggt
    26161 agcgaaatta ttcatgaccg cgaagaacaa gttgcggaga tctggaacgc ccgctttaag
    26221 gtgggtccag taccgatctt ttatagcccc tatttgcagt tgccggtggg tgacaaacgt
    26281 cgctctggtt tcttgatccc gaacgccaag tacaccacca ccaactactt tgagttctac
    26341 ctgccatatt actggaacat cgcgccaaat atggatgcca ccatcacgcc gcattatatg
    26401 catcgtcgtg gcaacatcat gtgggagaac gaattccgct acctctccca ggcgggcgct
    26461 ggcttgatgg aactggacta tctgccttca gataaagtct atgaagatga acacccgaac
    26521 gatgacagtt cacgtcgttg gttgttctac tggcaacatt ccggggtcat ggatcaagtg
    26581 tggcgtttca acgtagacta caccaaggtc agcgatccta gctacttcaa tgatttcgat
    26641 aacaagtacg gttccagtac tgacggctac gcaacgcaaa aattcagcgt tggctatgcg
    26701 gtgcaaaact tcaatgccac cgtttcaacc aagcagttcc aggtctttag cgagcagaac
    26761 accagtagct actcggcaga gccgcagtta gacgttaact actaccagaa tgatgttggt
    26821 ccgtttgata cgcgtattta cggccaggca gtgcactttg ttaacaccag agacgacatg
    26881 cctgaagcaa cccgtgttca cctggaaccg accatcaatt tgccgctctc taataactgg
    26941 ggcagcatca ataccgaagc gaagttgctg gcaacccatt atcagcaaac caatcttgac
    27001 tggtataact ccagaaacac gaccaagctg gacgaatccg ttaaccgcgt tatgccgcaa
    27061 ttcaaagttg acggcaaaat ggtctttgaa cgcgatatgg aaatgctggc tccgggttat
    27121 acccaaacgc tggaaccgcg cgcgcagtat ttgtacgtgc cgtatcgcga tcagagcgac
    27181 atctataact acgactcgtc tctactgcaa tctgactact ctggcctgtt ccgggaccgg
    27241 acttacggcg gtcttgaccg tattgcctcc gctaaccagg tgacgaccgg tgtcacatct
    27301 cgcatatatg atgatgctgc cgttgaacat tttaatattt ccgttggtca aatctactat
    27361 ttcacggagt ctcgcactgg cgatgacaac ataacatggg agaatgacga caaaacgggc
    27421 tcactggtgt gggcaggcga tacttactgg cgtatctccg agcgttgggg attgcgtggc
    27481 gggattcagt acgatacacg tctggataac gtagcgacca gtaactccag cattgaatac
    27541 cgtcgggatg aagaccgtct ggtacagctg aattaccgtt acgccagccc ggaatatatt
    27601 caggctacgc tgcctaagta ctattccact gctgagcaat ataagaatgg tatttcgcag
    27661 gtaggtgctg tcgccagctg gccaattgcc gatcgttggt ccattgttgg ggcctactac
    27721 tacgacacca atgcgaacaa gcaagccgac tctatgttag gtgtgcaata cagctcctgc
    27781 tgctatgcaa ttcgcgtcgg ttacgagcgg aagctgaacg gttgggataa cgataaacaa
    27841 catgcggtat atgacaacgc aatcggcttt aacatcgaac ttcgcggcct gagctccaac
    27901 tacggtctgg gtacgcaaga gatgctgcgt tcgaacattc tgccgtatca aaacactttg
    27961 tgatttgttg atttaccacg taatccgcag tgcggttaat tgaaatggaa aaagtatgaa
    28021 gaactggaaa acgctgcttc tcggtatcgc catgatcgcg aataccagtt tcgctgcccc
    28081 ccaggtagtc gataaagtcg cagccgtcgt caataacggc gtcgtgctgg aaagcgacgt
    28141 tgatggatta atgcagtcgg taaaactgaa cgctgcgcag gcaaggcagc agcttcctga
    28201 tgacgcgacg ctgcgccacc aaatcatgga acgtttgatc atggatcaaa tcatcctgca
    28261 gatggggcag aaaatgggag tgaaaatctc cgatgagcag ctggatcagg cgattgctaa
    28321 catcgcgaaa cagaacaaca tgacgctgga tcagatgcgc agccgtctgg cttacgatgg
    28381 tctgaactac aacacctatc gtaaccagat ccgcaaagag atgattatct ctgaagtgcg
    28441 taacaacgag gtgcgtcgtc gcatcaccat cctgccgcag gaagtcgaat ccctggcgca
    28501 gcaggtgggt aaccaaaacg acgccagcac tgagctgaac ctgagccaca tcctgatccc
    28561 gctgccggaa aacccgactt ctgatcaggt gaacgaagcg gaaagccagg cgcgcgccat
    28621 tgtcgatcag gcgcgtaacg gcgctgattt cggtaagctg gcgattgctc attctgccga
    28681 ccagcaggcg ctgaacggcg gccagatggg ctggggccgt attcaggagt tgccgggtat
    28741 cttcgcccag gcattaagca ccgcgaagaa aggcgacatt gttggcccga ttcgttccgg
    28801 cgttggcttc catattctga aagttaacga cctgcgcggc gaaagcaaaa atatctcggt
    28861 gaccgaagtt catgctcgcc atattctgct gaaaccgtcg ccgatcatga ctgacgaaca
    28921 ggcccgtgtg aaactggaac agattgctgc cgatatcaag agtggtaaaa cgacttttgc
    28981 tgccgcagcg aaagagttct ctcaggatcc aggctctgct aaccagggcg gtgatctcgg
    29041 ctgggctaca ccagatattt tcgatccggc cttccgtgac gccctgaccc gcctgaacaa
    29101 aggtcaaatg agtgcaccgg ttcactcttc attcggctgg catttaatcg aactgctgga
    29161 tacccgtaat gtcgataaaa ccgacgctgc gcagaaggat cgtgcatacc gcatgctgat
    29221 gaaccgtaag ttctcggaag aagcagcaag ctggatgcag gaacaacgcg ccagcgccta
    29281 cgttaaaatc ctgagcaact aatggttaaa acccaacgtg ttgtgatcac tcccggcgag
    29341 cccgccggga ttggcccgga cttagttgtc cagcttgcac agcgtgagtg gccggtcgaa
    29401 ctggttgttt gtgccgatgc cactctcctt accgaccggg cagcgatgct cggtttgccg
    29461 ctcaccctcc gcccttattc ccccaactcc cctgcacaac cgcaaactgc gggcacatta
    29521 acgctacttc ctgtcgcgct acgcgaatct gtcactgcgg ggcagttagc gattgaaaat
    29581 gggcattacg tggtggagac gctggcgcga gcgtgtgatg gctgtctgaa cggtgaattt
    29641 gctgcgctga tcacaggccc cgtgcataaa ggcgtcatta acgacgcagg tattccgttt
    29701 actggtcata ccgagttttt cgaagagcgc tcgcaggcga aaaaagtggt gatgatgctg
    29761 gcgaccgaag aacttcgcgt ggcgctggca acgacgcatt taccgctgcg cgatatcgca
    29821 gatgctatca cccctgcact tttgcacgaa gtgattgcta ttttgcatca cgatttgcgt
    29881 acaaaatttg gtattgccga accgcgcatt ctggtctgcg ggctgaatcc gcacgcgggc
    29941 gaaggcggtc atatgggtac ggaagagata gacaccatta ttccggtgct cgacgagctg
    30001 cgggcgcagg ggatgatact caacgggccg ctgcctgccg ataccctgtt tcagccgaaa
    30061 tatctcgata acgccgacgc cgtgctggcg atgtaccacg atcagggtct tcccgtgcta
    30121 aaataccagg gcttcgggcg cggtgtgaac attacgctgg gcctgccctt tattcgcaca
    30181 tcagtggacc acggcaccgc gcttgaactg gcgggacgtg gcgaagccga tgtcggcagt
    30241 tttattacgg cgcttaatct cgccatcaaa atgattgtta acacccaatg aataatcgag
    30301 tccaccaggg ccacttagcc cgtaaacgct tcgggcaaaa ctttctcaac gatcagttcg
    30361 tgatcgacag cattgtttct gccattaacc cgcaaaaggg ccaggcaatg gtcgaaatcg
    30421 gccccggtct ggcggcattg accgagccgg tcggcgaacg tctggaccag ctgacggtca
    30481 tcgaacttga ccgcgatctg gcggcacgtc tgcaaacgca tccattctta ggcccgaaac
    30541 tgacgattta tcagcaggat gcgatgacct ttaactttgg cgaactggcc gagaaaatgg
    30601 gtcagccgct gcgtgttttc ggcaacctgc cttataacat ctccacgccg ttgatgttcc
    30661 atctgtttag ctatactgat gccattgccg acatgcactt tatgttgcaa aaagaggtgg
    30721 tgaatcgtct ggttgcagga ccgaacagca aagcgtatgg tcgattaagc gtcatggcgc
    30781 aatactattg caacgtgatc ccggtactgg aagttccgcc gtcagccttt acaccaccac
    30841 ccaaagtgga ttccgccgtc gtgcgcctgg ttcctcatgc aacgatgcct cacccggtta
    30901 aagatgttcg tgtgttgagc cgcatcacca ccgaagcctt taaccagcgt cgtaaaacca
    30961 ttcgtaacag cctcggcaac ctgtttagcg tcgaggtgtt aacgggaatg gggatcgacc
    31021 cggcgatgcg agcggaaaat atctctgtcg cgcaatattg ccagatggcg aactatctgg
    31081 cggagaacgc gcctttgcag gagagttaac gatgatcaat tcgccccgag tgtgtattca
    31141 ggttcaaagc gtctacattg aggcacaatc ttcacctgat aatgaacgtt acgtttttgc
    31201 ttataccgta accatacgca atctggggcg agcgccagtg cagttgttgg ggcgttactg
    31261 gctgatcacc aatggcaatg gccgtgaaac cgaagtccag ggcgaaggag tggttggcgt
    31321 ccagccactt atcgcgcctg gcgaagagta ccagtacacc agcggtgcaa tcattgaaac
    31381 cccgctgggc accatgcagg gtcactacga aatgatcgat gaaaatggcg tccctttcag
    31441 catcgacatt cccgtattcc gactcgccgt tcccacactc attcattaaa agaatatggc
    31501 gacatacctt attggcgacg ttcatggttg ttacgatgaa ctgatcgcat tgctgcataa
    31561 agtagaattt acccctggga aagataccct ctggctgacg ggcgatctgg tcgcgcgcgg
    31621 cccgggttcg ctggatgttc tgcgctatgt gaaatcctta ggcgacagcg tacgtctggt
    31681 gctgggcaat cacgatctgc atctgctggc ggtatttgcc gggatcagcc gcaataaacc
    31741 gaaagatcgc ctgacaccgc tgctggaagc gccggatgcc gacgagctgc ttaactggct
    31801 gcgtcgccag cctttgctgc aaatcgacga agagaaaaag ttggtgatgg cccacgcagg
    31861 gatcacgccg cagtgggatc tacagaccgc caaagagtgc gcgcgcgatg tagaagcggt
    31921 gctatcgagt gactcctatc ccttctttct cgacgctatg tacggcgata tgccaaataa
    31981 ctggtcaccg gaattgcggg ggctgggaag actgcgtttt atcaccaacg cctttacccg
    32041 tatgcgtttt tgcttcccga acggtcaact ggatatgtac agcaaagaat cgccggaaga
    32101 ggcccctgcc ccactgaaac cgtggtttgc gattcctggc cctgtcgctg aagaatacag
    32161 catcgccttt ggtcactggg catcgctgga gggcaaaggt acgccggaag gtatatacgc
    32221 gctggatacc ggctgctgct ggggtggtac attaacctgc ctgcgctggg aagataaaca
    32281 gtattttgtc cagccgtcga accggcataa ggatttgggc gaagcggcgg cgtcttaaac
    32341 acagcctgat ataggaaggc cggataagac gcgaccggcg tcgcatccgg cactagccgt
    32401 aaattctata caaaattacc gccgctccag aatctcaaag caatagctgt gagagttctg
    32461 cgcatcagca tcgtggaatt cgctgaatac cgattcccag tcatccggct cgtaatccgg
    32521 gaaatgggtg tcgccttcca cttctgcgtc gatatgcgtc agatacagtt tctgcgcttt
    32581 tggcaggaac tgctcataaa cgcgaccgcc gccaatcacc atgatttctg gtacgtcacc
    32641 acacgccgcg atggcttcat ccaccgactt cacccacgtt acgcgatcgt ccgtacccgg
    32701 ttgactgctg aggataatat ttttgcgtcc tggcaacgga cgaccgattg attcccaggt
    32761 atggcggccc ataatcacgg gtttatttaa ggtgttgcgt ttaaaccagg cgagatcggc
    32821 aggcaggttc cacggcatgg cgttttccat gccgataacg cgatctaccg ctaacgccgc
    32881 aatcagactg atcattgaga tttcccgata aaaaaaattg tcgccactat acgtaaagcg
    32941 taaaccgtcg tcgactggtg cgaggatgat gttgaggaaa attttatatt ctgctggcga
    33001 gtccacgctc tctccctgga ctcgccgcat tacaatgaaa caaaaacaaa cagttagctg
    33061 taaagtgtga tttatgtcac tctttattag gatgagggtt tcgtttccgg ttcatccgcc
    33121 atgttgccgg tatgtttacc ttcttcggtt ccctgccagc catgtcgttg aattaatgac
    33181 agatgttcgc ggtcctcggt aatgatctca cttaacatcg cgctggtgcg tttatagacc
    33241 gccgcgcggg ctttggtgtc gttctcaacc attgccatct cttccaccat ctgaatatta
    33301 aagcggcgga acacatcggc acgttctcgc gcttcatacg gccccagacc taaactttcc
    33361 agtgccagac gcccggtttt cagcgcacct tcgaaggttt cacgctccgg cttttcaacg
    33421 cctgcctgac gcaaacgaat gtagtggtcg acatcgcggg cgcgggcaat aatctgcaaa
    33481 tgcgggaagt gttctttcac catctctgtc agttgcaggt tggtttgcgg atcgtcgatg
    33541 gcgttaatca gcacttccgc tttcgccgct cccgcagatt ccagtaaatc catccgcgtg
    33601 gcatcgccat aaaacacttt cataccaaat ttacgcaagg tttcgatatg gtccggatcg
    33661 tgatcgagca ccaccatttt caccccgctg gagagcagta aacgtccggt gatctgccca
    33721 aaacgaccga atccggcaat gattacccgc ggctgttctt cgtcgatctc atcggcttca
    33781 cgcgcctctt cagtagaaga ttgctcaagg cgattgagga tcaccagcag aatcggcgtt
    33841 gccgccatcg acagcgccac cgccagggtc agcgatttcg cccactccgg ctccagcaca
    33901 ttcgccatct gcgccgcgcc aaataccaca aaggcaaact cactgccctg ccctaacaac
    33961 accgcaaacc aacgacgctg tttatttggc acttgcaacg gtcgggcaat cagccacagc
    34021 atggcgattt tgatgatgag gaaaccgagc agcaaaatga caatgcgcaa tgggttttca
    34081 agcagcgtgc caaagtctat cgacatgcca acaccgatga aaaacagccc caacagcaaa
    34141 cctttaaagg gttcgatatc gctctccagc gcatgacggt attccgagct tgccagcagt
    34201 acgcccgcca gaaacgcgcc catcgccatc gacaagccga cctcttccag cagcaaacca
    34261 aagccaaaca cgaggaataa cgccacggca ctaaacactt cccgcaagcc agagcgggct
    34321 acaaaacgca gcgccggacg cgtgacatag cgccccagca ataccaccag caccagcgca
    34381 cccgccactt ttaacgccga gagagcaaat gcgcccatcg tcgtcgaggc actgctcgtt
    34441 gccagtagcg gaatcatcgc caccagcggg atcgccgcga tatcctggaa cagcagcacc
    34501 gcaaaggcac tgcgacccat ttgcgtcacc atcagattgc gttcattcat cgcctgcatg
    34561 gcaatcgccg tagaggagag cgccagcgtc atgccgatca attccgcgac ctgccagcgc
    34621 agcccaagta acatgcagaa cagccccagc aggccgccgc aaatcaccat ctgcaatgcg
    34681 ccaccgccga acactgccgc acgcagcttc cacagccttt gtggatcgag ttcgaggccg
    34741 ataataaaca gcatcagcac caccccaatc tcggcaaagt gcagaataga ttcggcatcg
    34801 gtcaccagtc gcagccccca cgggccaata atgcagccgg cgatcaggta gccaagtacc
    34861 gatcccagac caagacgtac cgcaatgggt acaatcagcg ctgccgaacc gagataaatc
    34921 agcgcctgaa tcagcgtatg gctatccatg atgggcctcc tgccattcca gcagacgttg
    34981 cttatagtga cgcgcctgcc cttcgagggt ttcgtcgtca caaataaagg tgcagtgcat
    35041 ggcaaacggt ggcagccagt tcagcccgca gtagattgcc gtcgcctgta gcggctgcga
    35101 cagcacatca aagcccggat gcgcaccaat ttcaaaatgg ctttccccgc cgccggtcgt
    35161 caccgcccac agcaaatgtt tgccatgcag cgccttgccg ccgtgaccgt aagcccagcc
    35221 gtgcgacaaa actttatcga tccaaagttt aagaagcgga ggaatgctgt accactgcat
    35281 cggatgctgc cagacgatca gatcggcgcg agacagcgcc tcctgctcgg cggcaatatc
    35341 gatattgaag tcaggataga gttgataaag agagcgaatt tcgacgcctt ccagcgtcct
    35401 tgcctgttca agcatccgtt tattcgcatg ggaatgatgc ggatacggat gcgcataaat
    35461 tataagaatc ataggtagcc cgcgtgatta cgcctttgtt ttcccacaaa gtgtagtcat
    35521 atattcacgc ggcttatagt caataatatt gattcagaaa agagagaaat ctgaacaatt
    35581 taccccattc tctgcccgcg gatcgtcata ttgctggttt gcgccaatga catccctcga
    35641 tgtctccggg gcaaacgcta cggaaatcaa caagccaaac agcgagatac ccgcccccat
    35701 tagcatcgtg ttactgatac cgtaattatt gataaagatc ggcagtgccc aggtcgaaac
    35761 aatggtgcca atacggctta aggacataat cacgcccacg gcagaggcgc ggatatctgt
    35821 cgggaagagt tcattaggat agagccactg caaattaccc ggcccgccag agaaaaaggc
    35881 atacaccgca aaggccatca ctaccagcca gatccccata tccgggatca gccccaaaac
    35941 cgccagcgcc agcgtcatca tggcaaagct gccaatcaac aatggacgcc gtccggcagt
    36001 gtttaaccac agcatcggcg gaatacagcc gagcataaag aacaggctaa tcaccacgtt
    36061 ccccagcgcc gcgtttttgc caacacccaa tcccaacaaa ccaacgattt gcgggccaaa
    36121 ggtgtaaatg gcgaacattg ggatcacctg gcaggtccag atggcggcaa caaacagaac
    36181 aaaaggaaaa tggcggcgat taaacagatc gcgaaaacgg gtttgctgcg gctgctcttc
    36241 atcgaaagcc accggttcgc caaacagttt tatcatcatc tcttcgcact cttttactcg
    36301 ccctttgcgt aataaccagc ggggagattc aggcagttcg aatcgaccaa tcaaaatcaa
    36361 caaacagggg atcgccgcgc tacccagcat ccagcgccag ccgccttcca catcataaag
    36421 ccagtagccg accagatcgg cgcaggtcgc gccgacatac cacatggcgg cgataaagct
    36481 gatggaaaat gcccgctgac gggtactgga gaactcggtg atcattgagg tggcgatggg
    36541 ataatcggca ccgatgacaa tgccgataag tacccgcatc accaacagtt cgacggggga
    36601 tgaaacaaac atcgtcgcca ccgatatcac gccgatggcg atgatatcaa tgaggaacat
    36661 tttgcgccgt ccgactttat cggaaatata gccaaacagc gatgtgccaa cgaacagccc
    36721 ggcgagcgtt cccgcgccca acaagccaat ccagtcagcg tccagtttta gcgccggagt
    36781 cagttgctcc agcgccacgc caatcattac cagtacataa ccatcca
//
LOCUS       DAJVUK010000021        36505 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.021, whole genome shotgun sequence.
ACCESSION   DAJVUK010000021 DAJVUK010000000
VERSION     DAJVUK010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36505
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.021"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            93..989
                     /locus_tag="OQQ57_001011"
     CDS             93..989
                     /locus_tag="OQQ57_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1955850.1"
                     /translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE
                     QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT
                     YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN
                     LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN
                     PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI
                     RNHRYTATMLQHIAEDRDGTNH"
     gene            complement(986..2464)
                     /gene="scpC"
                     /locus_tag="OQQ57_001012"
     CDS             complement(986..2464)
                     /gene="scpC"
                     /locus_tag="OQQ57_001012"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
                     /protein_id="HCS1955851.1"
                     /translation="METQWTRMTADEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARR
                     ANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSF
                     VDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIE
                     LNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPD
                     AGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENP
                     EIPPFMMYSEVLQESVVHLLETDKISGASASSLTISADSLRKIYDNMDYFASRIVLRP
                     QEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSI
                     FMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCA
                     HPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG"
     gene            complement(2488..3273)
                     /gene="scpB"
                     /locus_tag="OQQ57_001013"
     CDS             complement(2488..3273)
                     /gene="scpB"
                     /locus_tag="OQQ57_001013"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HCS1955852.1"
                     /translation="MSYQYVNVATINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN
                     RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM
                     VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL
                     IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE
                     AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(3284..4279)
                     /gene="meaB"
                     /locus_tag="OQQ57_001014"
     CDS             complement(3284..4279)
                     /gene="meaB"
                     /locus_tag="OQQ57_001014"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HCS1955853.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPYCGNTLRLGVTGTPSAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKIRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIEFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
     gene            complement(4272..6416)
                     /gene="scpA"
                     /locus_tag="OQQ57_001015"
                     /pseudo
     CDS             complement(4272..6416)
                     /gene="scpA"
                     /locus_tag="OQQ57_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
     gene            complement(6620..7513)
                     /gene="argP"
                     /locus_tag="OQQ57_001016"
     CDS             complement(6620..7513)
                     /gene="argP"
                     /locus_tag="OQQ57_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator ArgP"
                     /protein_id="HCS1955854.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            7896..8555
                     /gene="rpiA"
                     /locus_tag="OQQ57_001017"
     CDS             7896..8555
                     /gene="rpiA"
                     /locus_tag="OQQ57_001017"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HCS1955855.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            8810..10042
                     /gene="serA"
                     /locus_tag="OQQ57_001018"
     CDS             8810..10042
                     /gene="serA"
                     /locus_tag="OQQ57_001018"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HCS1955856.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            10271..10330
                     /gene="ibsC"
                     /locus_tag="OQQ57_001019"
     CDS             10271..10330
                     /gene="ibsC"
                     /locus_tag="OQQ57_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HCS1955857.1"
                     /translation="MMRLVIILIVLLLISFGAY"
     gene            10663..10722
                     /locus_tag="OQQ57_001020"
     CDS             10663..10722
                     /locus_tag="OQQ57_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCS1955858.1"
                     /translation="MMRLAIILIVLLLISFPAY"
     gene            complement(10823..11425)
                     /locus_tag="OQQ57_001021"
     CDS             complement(10823..11425)
                     /locus_tag="OQQ57_001021"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HCS1955859.1"
                     /translation="MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(11446..11629)
                     /gene="ssrS"
                     /locus_tag="OQQ57_001022"
     ncRNA           complement(11446..11629)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="OQQ57_001022"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(11671..12000)
                     /gene="zapA"
                     /locus_tag="OQQ57_001023"
     CDS             complement(11671..12000)
                     /gene="zapA"
                     /locus_tag="OQQ57_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HCS1955860.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            12168..12746
                     /gene="ygfB"
                     /locus_tag="OQQ57_001024"
     CDS             12168..12746
                     /gene="ygfB"
                     /locus_tag="OQQ57_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HCS1955861.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            12772..14097
                     /gene="pepP"
                     /locus_tag="OQQ57_001025"
     CDS             12772..14097
                     /gene="pepP"
                     /locus_tag="OQQ57_001025"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HCS1955862.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIMNSALEKLRKGSRQNLTAP
                     ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            14094..15272
                     /gene="ubiH"
                     /locus_tag="OQQ57_001026"
                     /gene_synonym="visB"
     CDS             14094..15272
                     /gene="ubiH"
                     /locus_tag="OQQ57_001026"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HCS1955863.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            15295..16497
                     /gene="ubiI"
                     /locus_tag="OQQ57_001027"
                     /gene_synonym="visC"
     CDS             15295..16497
                     /gene="ubiI"
                     /locus_tag="OQQ57_001027"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HCS1955864.1"
                     /translation="MQCVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADA
                     PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADISLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
                     RQFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(16571..16654)
                     /locus_tag="OQQ57_001028"
     CDS             complement(16571..16654)
                     /locus_tag="OQQ57_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955865.1"
                     /translation="MSKNTKSKNNDIRKYNAKTEVKLVYFK"
     gene            16944..18038
                     /gene="gcvT"
                     /locus_tag="OQQ57_001029"
     CDS             16944..18038
                     /gene="gcvT"
                     /locus_tag="OQQ57_001029"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HCS1955866.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            18062..18451
                     /gene="gcvH"
                     /locus_tag="OQQ57_001030"
     CDS             18062..18451
                     /gene="gcvH"
                     /locus_tag="OQQ57_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HCS1955867.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            18570..21443
                     /gene="gcvP"
                     /locus_tag="OQQ57_001031"
     CDS             18570..21443
                     /gene="gcvP"
                     /locus_tag="OQQ57_001031"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HCS1955868.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETSISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSHEVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ"
     gene            21709..22452
                     /locus_tag="OQQ57_001032"
                     /pseudo
     CDS             21709..22452
                     /locus_tag="OQQ57_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(22509..23942)
                     /gene="bglA"
                     /locus_tag="OQQ57_001033"
     CDS             complement(22509..23942)
                     /gene="bglA"
                     /locus_tag="OQQ57_001033"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase BglA"
                     /protein_id="HCS1955869.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEIPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMINAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWCWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            23987..24298
                     /locus_tag="OQQ57_001034"
     CDS             23987..24298
                     /locus_tag="OQQ57_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HCS1955870.1"
                     /translation="MQPNDITFSQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            24462..25121
                     /locus_tag="OQQ57_001035"
     CDS             24462..25121
                     /locus_tag="OQQ57_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HCS1955871.1"
                     /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
                     NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
                     VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSMCHFLAIYLYIGQ
                     A"
     gene            complement(25198..26178)
                     /gene="ygfZ"
                     /locus_tag="OQQ57_001036"
     CDS             complement(25198..26178)
                     /gene="ygfZ"
                     /locus_tag="OQQ57_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HCS1955872.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAADDERVLLGVAGFQARAALANLFSELPSREKQVVKEGATTLLWFEHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            26421..26687
                     /gene="sdhE"
                     /locus_tag="OQQ57_001037"
     CDS             26421..26687
                     /gene="sdhE"
                     /locus_tag="OQQ57_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HCS1955873.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI"
     gene            26668..27075
                     /locus_tag="OQQ57_001038"
     CDS             26668..27075
                     /locus_tag="OQQ57_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin CptA"
                     /protein_id="HCS1955874.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
     gene            complement(27115..27636)
                     /gene="fldB"
                     /locus_tag="OQQ57_001039"
     CDS             complement(27115..27636)
                     /gene="fldB"
                     /locus_tag="OQQ57_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HCS1955875.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            27748..28644
                     /gene="xerD"
                     /locus_tag="OQQ57_001040"
     CDS             27748..28644
                     /gene="xerD"
                     /locus_tag="OQQ57_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HCS1955876.1"
                     /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            28669..29379
                     /gene="dsbC"
                     /locus_tag="OQQ57_001041"
     CDS             28669..29379
                     /gene="dsbC"
                     /locus_tag="OQQ57_001041"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000715205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HCS1955877.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGAAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLESQAEQQMKAIW
                     CAKDKNKAFDDVMAGKAATPASCDIDIADHYALGVQLGVSGTPAIVLSNGTLVPGYQP
                     PKEMKEFLDEHQKMTSGN"
     gene            29385..31118
                     /gene="recJ"
                     /locus_tag="OQQ57_001042"
     CDS             29385..31118
                     /gene="recJ"
                     /locus_tag="OQQ57_001042"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HCS1955878.1"
                     /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQIEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            31209..32307
                     /gene="prfB"
                     /locus_tag="OQQ57_001043"
     CDS             join(31209..31283,31285..32307)
                     /gene="prfB"
                     /locus_tag="OQQ57_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HCS1955879.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            32317..33834
                     /gene="lysS"
                     /locus_tag="OQQ57_001044"
     CDS             32317..33834
                     /gene="lysS"
                     /locus_tag="OQQ57_001044"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HCS1955880.1"
                     /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITK
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(33877..34425)
                     /gene="idi"
                     /locus_tag="OQQ57_001045"
     CDS             complement(33877..34425)
                     /gene="idi"
                     /locus_tag="OQQ57_001045"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HCS1955881.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTNSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQAANSEARKLLSAFAQHN"
     gene            34480..34551
                     /locus_tag="OQQ57_001046"
     CDS             34480..34551
                     /locus_tag="OQQ57_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955882.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(34548..34673)
                     /locus_tag="OQQ57_001047"
     CDS             complement(34548..34673)
                     /locus_tag="OQQ57_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955883.1"
                     /translation="MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
     gene            complement(34675..36123)
                     /gene="uacT"
                     /locus_tag="OQQ57_001048"
     CDS             complement(34675..36123)
                     /gene="uacT"
                     /locus_tag="OQQ57_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417364.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate/proton symporter UacT"
                     /protein_id="HCS1955884.1"
                     /translation="MSAIDSQLLSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAG
                     AVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFA
                     AVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSVGL
                     SIIQVGIDWAAGGKGNPQYGNPVYSGISFAVLIFILLITRYAKGFMSNVAVLLGIVFG
                     FLLSWMMNEVNLSGLHDALWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFL
                     ALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVC
                     ISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYN
                     LYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHAD
                     LVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE"
BASE COUNT         8794 a         9188 c         9764 g         8759 t
ORIGIN      
        1 ccccccggat catggacgac tgggggcagt aatcatgccg ggtctggctg gctaacaccc
       61 cattataagg agtacgaata aagtaacggg ggatggacat ttttatttcg aaaaagatgc
      121 gcaatttcat tttattagcg caaaccaata atattgcccg ggcggcagaa aaaatccata
      181 tgacggcttc gccatttggt aaaagcattg ccgcgctgga agaacaaatt ggctatacgc
      241 tatttacccg caaagataat aatatcagcc tcaataaagc cggtcaggaa ctgtatcaaa
      301 aactgttccc ggtttatcaa cgactttctg cgattgataa tgaaatccat aactcagggc
      361 gtcgttcacg agaaattgtg attggcatag ataatactta tccgacaatt attttcgatc
      421 agttgattag tctcggagat aagtatgaag gcgtgaccgc ccagccagtt gagttcagcg
      481 aaaacggcgt tatcgataat ctttttgacc gtcagttaga ttttattatc tccccacagc
      541 atgtatctgc acgagttcag gaactggaaa acctgactat cagtgaatta ccaccgctgc
      601 gattgggctt tctcgtttct cgccgttatg aagagcgtca agagcaagag ctgcttcagg
      661 agctgccctg gctacaaatg cgctttcaaa accgggctaa cttcgaagca atgattgatg
      721 cgaatatgcg accttgtggg atcaatccca ccattattta tcgtccctac agttttatgg
      781 ccaaaatcag cgccgtggag cgcggacatt ttctgacggt gatcccgcat tttgcctggc
      841 gactggtgaa tccggcaacg ctgaaatatt ttgatgcgcc gcacaggccg atgtatatgc
      901 aggaatatct ttattcaatc agaaatcatc gttataccgc cacgatgctt cagcatattg
      961 ctgaagatcg tgacgggaca aaccattaac ccagcatcga gccggttgca attaaattac
     1021 ggtgtaagtc gaagacgtgg ctaagatcgt ggtgaatatg tccgccgggc gcattttcca
     1081 gatagcgatg cagataatcc cgatacatag gatgtgcaca attatcaatg atagtgcggg
     1141 cgcgttgaag cggggaaaga ccgcgcagat cggcgatccc ttgttcggtg atgatcactt
     1201 tgacgctgtg ttcgctgtga tcaacatggc tgcacattgg cacgacggtt gagatcttgc
     1261 cttctttagc aatcgacgga gccataaaga tcgacagata cgcgttgcgt tcaaaatcac
     1321 cgctgccgcc gatgccgttc atcagatcga ccccggctac gtgcgttgaa tttgcatgcc
     1381 cgtaaatatc aaactccagg ccgacgttca gagcgatgac gcccagacga cggatgattt
     1441 ccgggttatt ggaaatctcc tgcggacgca acacaatgcg gctggcaaag taatccatat
     1501 tgtcgtaaat cttgcgcagg gaatcggccg agattgtcag gctggaggcg ctggccccgc
     1561 tgattttgtc ggtttccagt aaatgcacca ccgattcctg tagcacttcc gaatacatca
     1621 tgaacggagg aatttccggg ttttccccca gacgcgccat taccgcatta ttgatattgc
     1681 ccacgccact ttgcagcggc agaaattccg gcggaatacg cccatgcgcc atttcctgca
     1741 ataagaacgt gaccacgtta tcggcaatct gctggcacat gggattttgc ttatccagca
     1801 tattaccggc gtcgggcaag ttggtttcca cgacggcgac aatctttttc ggatcgattt
     1861 gcacatagcg ggtaccgacg cgatccattg catggaagat cgacacgcta ttgcgccgcg
     1921 gtggcgcgcc aggaatcaca atatctgcca gttctgcaac gcgcggatcg tgatagtgat
     1981 taagttcaat gatcactttc ttcgctcgca gcagccaggt cggcgcatta ccgatcccgc
     2041 tggttaacca gactcgacca tccggtgcca gtgccgatgc ttcaatgacg gcaacatcaa
     2101 tgtcgccgaa gaaaccgtaa ttgaccattt gcgccacttc gctcaaatgc aggtcaacga
     2161 aactcaccgc gccctgattg atctttttac gtaaaccgga cgatgtttga tatggcgcac
     2221 gccaggaaac agcatcggcg tcagaaagta catcgtcagc ggcggcgctg attgacgccc
     2281 ccgtcagcag gcgaatttga tacggctttt tggcctcatg ctgttcgtta gctctgcggg
     2341 caatcgcggt gggtagggct ttcggcgaac ccgccggggt aaagccgcta aatgccacca
     2401 tgtcgttatg ctggataatt tctgccgctt catcggcggt catccttgtc cactgagttt
     2461 ccatttttac tccttcgttc gcagggatta atgaccaacg aaattaggtt tacgtttttc
     2521 gaggaaagcg ttcattcctt cctggtaatc ttcgctgtca taaaccgcgc gtcgcatccc
     2581 ctgaatacgt tcaaattcat cggagttcat ggtgtgcgct tcgcccagta cacgcagctc
     2641 ttctttgata acagcaatgg ctaacggcgc tttctcagag atgtggtgcg ccatttgtaa
     2701 ggtgaaatct tccagttctt ccacttccac aacatggttg aggatgccga cagccagcgc
     2761 gcgctgggcg gtgattggcg aagcggtaaa aatcagctct ttgacaatgt ggaagcccgc
     2821 gtcgcgggtc aggttgtgaa tgccgaccag gttatacggg acgccgaggt ttacaggcgt
     2881 cattgagaag gttgaggtac tggcggcgat gatcagatcg gaactcatga tcatttcaaa
     2941 tgcgccaccc caaacactac cttccaccat cgaaatgatc ggtttcggga atttttggat
     3001 catgcgggtg atttgacgca atggatcatc ataggagagc ggatcgcgac cgccagacgg
     3061 cagttcgtga atatcgtgac ctgcggagaa gactttggat ccactcggcg cgcgcaaaat
     3121 gatacagcga atttccggcc ggttgagatc gcttaacgcc tgcataagat catcaataaa
     3181 gactttactt aaggcattaa gttttcggcc atagttaaac tcaatgaccg ccactttgtt
     3241 gatagtggca acgttcacat actgataaga cataaaaatt cctttaatca aaatattgcg
     3301 tctggataaa ttcactgagc tgccgcaggc cggtgcgcgg tgagagcgta ttgtttttga
     3361 ccgctaaaag cgtctggcgg taatagcgat cgaaatcttc attcgcgaac aggtgattca
     3421 gtacttcttc ttcggtctgc ttacgcagcc attccaccga ttgttgttgc cgcacttgtt
     3481 gtaaacgacc actggcagtt agcgcggttt tgaactcgat gatggcgtgc cagatctcat
     3541 cgattccacg tttttccagt gcgctacaag tcagaacccg tggctgccat tcgtcgtatt
     3601 tacgtcgcag aatatgcagg gcactctcgt acatatgccg ggcaatggcg acattggtat
     3661 ggttatcgcc atcgtctttg ttgataacga tcagatcagc cacttccatc agcccttttt
     3721 taatgccctg cagatcatcg ccgccaccgg caatttgcaa cgagataaaa cagtccacca
     3781 tgcgggcgac ttctgtttcc gactgcccga cgccaaccgt ttcgacaatc actacgtcat
     3841 aacccgccgc ttcgcataac agcattaatt cccgcgctcg ctgactggca ccgcccagat
     3901 gaccggagga tggtaccggg cgaataaacg ccgcttcggc acgcgccagg tcattcatgc
     3961 ggattttatc cccgagaatg ctaccgccag tgaccgggct gctgggatcg accgcaataa
     4021 ccgcgacctt taatccctct cgaatcaaca acatgccaaa ggcctcaaga aaggtacttt
     4081 tccccgcgct gggggtgccg gtaacgccca gtcgcagggt gttaccgcag tacggcataa
     4141 tggcatcaag cagctgcgta cttagtgcct gatgacgcgg gtgacggctt tccaccagcg
     4201 tcatggcctg ggcgagtgtg gcacgctcac cctgacgtaa gcggcgaata ctttctgcca
     4261 gcgtggcttc attaatcatg atgctggctt atcagattca gtacgtcgcg cacactgtcg
     4321 agcataggtg tacctggacc ataaatcgcc gccacgccgc gctcttgcag gaaggcgtaa
     4381 tcctgcggtg gaatgacgcc accggcgact acgcagatat cttcgcgtcc ccattttttc
     4441 agcgcctcga ccagttccgg gatcagcgtt ttatgaccgg cagccagtga ggatgcgccc
     4501 actacgtgaa cgtcattttc tactgccagg cgggcgatct cttcaggtgt agagaacatc
     4561 gggcttaaat ctacgtcgaa accgagatcg gaataggcgc tggcgatcac tttcgagccg
     4621 cgatcgtgcc catcctggcc cattttggcg atcagaatgc gcaggcgacg accattgtcg
     4681 gcaaggaact gctccgtttg cgcaacaatg gcatcgaact cggaggccga tttctcagat
     4741 tgatgatagc tttgcgcaat cacgccggta acacactggc ttggcaccag ataacggtcg
     4801 aaagcggctt ccagcgcatc ggaaatttca cccagggtgg cgcgaacgcg agcggcatta
     4861 acagcggcag ccagcaggtt ttcgttatgc tgtgcggcgt gagtcagggc gttcaacgcg
     4921 gcggttacgg cggcatcatc acgggtggcg cgaatgcgtt ccagcgaagc aatttgctcg
     4981 ttacgcacca tcacgttgtc gatctcaagt acatcggttt cgtcttcgtg atccagtttg
     5041 tacttgttga caccaacgat gacacgtttg ccctggtcga taagcgactg ttcgcgcgct
     5101 gaggcctatt cgatcattcg ttttggcaga cctgcttcga tcgctttcgc cataccaccg
     5161 gcttcgtcga tctgttggat aatagctctg gcttgtttga cgatttgatc ggtcagcgac
     5221 tcaatgtaat aggatccggc cagtggatcg acggtgcggc agagttctga ttcttcctgg
     5281 atgatgatct gggtgttgcg ggcaatgcgt gctgagaaat cggtaggcaa accaagcgct
     5341 tcgtcaaagg cgttggtatg cagtgactga gtaccgccca gcgtcgcagc cagtgcttca
     5401 atggtggtgc ggataacgtt gttatacgga tcctgttcag tcaggctcca gcctgaggtc
     5461 tggcagtggg tacgcagcgc cagtgatttc gggtcctgtg cgccaaatcc actgaccgct
     5521 tcgctccatc aataacgtgc cgcacgcaac atggcgacgt tcataaacag atccatgccg
     5581 atgccgaaga agaacgacag gcgaggagcg aagtcatcaa ttttcagtcc ggcagagatt
     5641 gctgctttga tgtactcaat cccatcagcg agcgtaaatg ctacctgctg cacgcagttg
     5701 gcacccgctt cacccatgtg gtaaccgctg atactgatgg tattaaatcg cggcatgttg
     5761 ccggaacacc aggcgatgat gtcggcgata atgcgcattg acggttttgg cgggtaaata
     5821 taggtgttgc ggcagaggta ctctttgagg atatcgttct gaatggtgcc ggtcagttta
     5881 tcaggtgtaa caccttgctc ttccgcggcg acgatataaa acgccagtac tggtagcact
     5941 gcgccattca tggtcatcga aaccgacatt ttatccagcg ggatctggtc gaacaggact
     6001 ttcatatctt ccacggtgtc gatagcgacg cccgctttgc cgacgtcgcc cgccacgcgc
     6061 gggttatcgg agtcgtagcc tcggtgggtg gcaaggtcaa acgcaacgga aagacctttt
     6121 tgcccggcgg ccaggttacg gcgataaaaa gcgttggact cttttgctgt tgaaaaacca
     6181 gcatactgac ggatggtcca cggttgggcg gtatacatag tggcacgcgg gccacgaacg
     6241 tagggcggca aaccaggaag ggtacctgtc acctccagat tatcgagatc ggcttcggta
     6301 tacagcggct tgatggtgat cccttccgcg gtttgctgaa ccagcgagtc gacagttttc
     6361 tcccgacggc tcaattcctt gttggcaagc tgttgccact cctgcacgtt agacattatt
     6421 tgctccgtaa aacgcaatca aaatgagggt atttgcgcct acggtgagct ttttacgtgg
     6481 gtttgtcgcc agcaaaaaaa atgcattcag acgtcgtttt ttgccgcctg agatttgtct
     6541 attttgtgat gtgattcaag gaatacaaaa agaagtgagg acaacgcctg atatgtgcta
     6601 tcaggcatta tttgatggat taatcctgac gaaggacttt gtgaccataa tcgagcaacg
     6661 catcagtgac tttacgcatc atgcggcttt caggagcaaa gcggtgccag tagagcatcc
     6721 ggcgttgaaa tagccctggc gttaagtcaa tcagttcacc gctggctagt tctttctcga
     6781 tttgcaggtg cgggatcata cagcaggtgg tgccctggcg agcaagttgc acgaacgctt
     6841 ctgaagaatt aacgatatgg cagggcacgc tgcctggagg cagatcgaag ttttgctgca
     6901 aaaaggcctg gtgcatatcg tcaagatggt caaaggcgac cacaggtgct ttcaataatg
     6961 ccgaacgcgt tacgccgtta gggaaatatt tttcggcaaa cggttttgag ctgacgaaca
     7021 gatagtcaag cgcaccgagc ttatcgacaa ggcaactcgg cagcgcctga tgttgaatac
     7081 tcaccgcgcc gaccacttcg ccgcggcgca gacgttcctg agtacgggtt tcatcttcta
     7141 cctgcaagtt gaggcggata ggcgaatcag ccaatacagg agccagtgcc ggaagcaacc
     7201 acgtcgccag actgtcggcg ttgaccgcca gtgaaagcag cagcggagtc gaaccggttt
     7261 gttcatcgcc cagccactct tcttccagca actccacctg gcgcagcagt gccagcagtt
     7321 tttgcccttg ttccgtcggg cgcggcggta cggtacgcac caacagcggc tgcccgaaca
     7381 tattttccag ttgcttaatg cgctgtgaga cggctgattg tgtaatgcac agcttttgtg
     7441 ccgcgcgctc aaatcctcgt tcacgtatca ccgcatccag tgcctgtaat gttctgtagt
     7501 ccgggcgttt cattgctgtt gtctgctcct ggtaaatgct ttttcctgca ctatgacaca
     7561 attttgtgtc aggttgcata taccgcagcc gtcggcgggt aacatttgta tcaatggtta
     7621 aacgcgcagc ttaaaagatc agggatttgc gctattgcat ttcgcttagc gacttcgcgc
     7681 cctggttatg ttgaatggcg tggcgttatt gcctctgttc gcaccgtgga gcggcatacc
     7741 cagaccgttg tatgctttat ttgcggggcg aaaggggatg cccgccattg cgcgatattt
     7801 tatggatgag ttaaccaccc ggcttgccaa cggggtctga atcgcttttt ttgtatataa
     7861 tgcgtgtgaa atttcatacc acaggcgaaa cgatcatgac gcaggatgaa ttgaaaaaag
     7921 cagtaggatg ggcggcactt cagtatgttc agcccggcac cattgttggt gtaggtacag
     7981 gttccaccgc cgcacacttt attgacgcgc tcggcacgat gaaaggccag attgaagggg
     8041 ccgtttccag ttcagatgct tccactgaaa aactgaaaag cctcggcatt cacgtttttg
     8101 atctcaacga agtcgacagc cttggcatct acgttgatgg cgcagatgaa atcaacggcc
     8161 acatgcaaat gatcaaaggc ggcggcgcgg cgctgacccg tgaaaaaatc attgcttcgg
     8221 ttgcggaaaa atttatctgt attgccgacg cctccaagca ggttgatatt ctgggtaaat
     8281 tcccgctgcc agtagaagtt atcccgatgg cacgtagtgc agtggcgcgc cagctggtga
     8341 aactgggcgg tcgtccggaa taccgtcagg gcgtggtgac cgataatggc aacgtgatcc
     8401 tcgacgtcca cggcatggaa atccttgacc cgatagcgat ggaaaacgcc ataaatgcga
     8461 ttcctggcgt ggtgactgtt ggcttgtttg ctaaccgtgg cgcggacgtt gcgctgattg
     8521 gcacacctga cggtgtcaaa accattgtga aatgatctga cgggggaacc tcccccgtta
     8581 aaaaaattct cttcattaaa tttggtgaca tgtgtcacgt ttttacctgg ctattgtcga
     8641 ttgctctaaa taaatcctct aaaccagcat attcaaccaa gaaatacctt tgcgtgatat
     8701 ttcctcaaca tcgcgacgca aacgttcata ttgccgcaat attatttttt gatatgttga
     8761 aaggcggatg caaatccgca cacaacattt caaagacagg attgggtaaa tggcaaaggt
     8821 atcgctggag aaagacaaga ttaagtttct gctggtagaa ggcgtgcacc aaaaggcgct
     8881 ggaaagcctt cgtgcagctg gttacaccaa catcgaattt cacaaaggcg cgctggatga
     8941 tgaacaatta aaagaatcca tccgcgatgc ccacttcatc ggcctgcgat cccgtaccca
     9001 tctgactgaa gacgtgatca acgccgcaga aaagctggtc gctattggct gtttctgtat
     9061 aggaacaaac caggttgatc tggatgcggc ggcaaagcgc gggatcccgg tatttaacgc
     9121 accgttctca aatacgcgct ctgttgcgga gctggtgatt ggcgaactgc tgctgctatt
     9181 gcgcggcgtg ccggaagcca atgctaaagc gcaccgtggc gtgtggaaca aactggcggc
     9241 gggttctttt gaagcgcgcg gcaaaaagct gggtatcatc ggctacggtc atattggtac
     9301 gcaattgggc attctggctg aatcgctggg aatgtatgtt tacttttatg atattgaaaa
     9361 taaactgccg ctgggcaacg ccactcaggt acagcatctt tctgacctgc tgaatatgag
     9421 cgatgtggtg agtctgcatg taccagagaa tccgtccacc aaaaatatga tgggcgcgaa
     9481 agaaatttca ctaatgaagc ccggctcgct gctgattaat gcttcgcgcg gtactgtggt
     9541 ggatattccg gcgctgtgtg atgcgctggc gagcaaacat ctggcggggg cggcaatcga
     9601 cgtattcccg acggaaccgg cgaccaatag cgatccattt acctctccac tgtgtgaatt
     9661 cgacaacgta cttctgacgc cacacattgg cggttcgact caggaagcgc aggagaatat
     9721 cggcctggaa gttgcgggta aattgatcaa gtattctgac aatggctcaa cgctctctgc
     9781 ggtgaacttc ccggaagtct cgctgccact gcatggtggt cgtcgtctga tgcacatcca
     9841 cgaaaaccgt ccgggcgtgc taactgcgct gaacaaaatc ttcgccgagc agggcgtcaa
     9901 catcgccgcg caatatctac aaacttccgc ccagatgggt tatgtagtta ttgatattga
     9961 agctgacgaa gacgttgccg aaaaagcgct gcaggcaatg aaagctattc cgggtaccat
    10021 tcgcgcccgt ctgctgtact aattcccctt ctctgaaaat taacgggcag gtcactgact
    10081 tgcccgtttt tttatccctt ctccacaccg ttgccgcgtt gcgcattcta ctttgcgagt
    10141 ctgctccaga aaataaatca aagtcagatc aatgcgttgt gtttatttaa tggggattta
    10201 cgatggcggg acagtatggg gctgtaacgg taaagccctc accgaagcga gggcttaaag
    10261 gagaagggtt atgatgcgac ttgtcatcat actgattgta ctgttactga taagtttcgg
    10321 agcttattaa cagtcagtct ctggggagga gtcatcctcc cttaccctta ctcactaaat
    10381 taggtcaaag aatcaacgat gtcaatcagg gcgatgcggg gtgcatcgcc ctgaaccgaa
    10441 ctttttgata gccacttcat cgcccacgtt tactgccgta atagatcctt tttcccaaaa
    10501 attatctctg ttttgcatgg ggtttttcga acacgctcga agaaaagatt taaaggtaga
    10561 tcaatgcgtt gtggttattt aaagagagct tacgatagct gggcagcatg gggctgtaac
    10621 ggtaaagccc tcaccgaagc gagggcttga aggagaaggg ttatgatgcg acttgccatc
    10681 atactgattg tactgttact cataagtttc ccagcttatt aacagtcagt cacaggggag
    10741 gagcaatcct cccttaccct tactcactaa attaggttaa agaatcaacg atgtcaatca
    10801 gggcgatgca ggtgtatcgc ccttaccact cccagacttt cgacggtgta accaccgcag
    10861 gaagagggat atcccactct tcaacgggga gtttttccac caactgacaa tcatgcgcat
    10921 aacccaccgg ttgcgtttta tagtgctgcc agttttgtaa ggtccgatca taaaaaccac
    10981 cgcccattcc caggcgctga ccgtactcat caaaggcgac cagcggtgtg atcagcacgt
    11041 ctaatcggga aaggggtagc acgtcacgca catccagttt tggctcatgg attttcaacc
    11101 tgttcatcac cagttcgctt tgcggatggt aattcaggaa cagcaaatta ccagcactaa
    11161 agggatgcaa aactggaaga tatacgcgct taccggcgcg ccagagttgt tctattagcg
    11221 gctgggtgtc gagttcacca tcaaaagaga ggaatacagc gaccgtatgc gccatcacca
    11281 ccgggggata agtcatcatc cgggtagcgg cttgttgacc catttcctgc tgttgttccg
    11341 gcgttaacgc acgacgacgt tgccgaatca ttttgcggat ttcttgtcgg gataatgtca
    11401 gtgggagttc tggtagttgc gtcatggctg gtgccagata agaagggaat ctccgagatg
    11461 ccgccgcagg ctgtaaccct tgaacccttg gttcaaggtg aatgtgtcgt cgcagtttta
    11521 aggcttctcg gacggaccga gcatgctcac caaccgcgga gcgccacatt cttgtggtat
    11581 gaaatatcgg ctcaggggac tggcccgctt gcgaacatct cagagaaatt ttgtcttcac
    11641 ggttactcta ccacagtaaa ccgaaaagtg tcattcaaag ttttggttag ttttttcggt
    11701 gatgcgacct tgttcaagta acgcttgttc tatggtctgc tgcagcatcc gaatacgctg
    11761 ttccatactt gccgcgtagt cacgagtctt cgctttttct tgcgctaact catagctgat
    11821 attcaatgcg gcaatgaaga ccaactgttc agtatttgtg actctagtgc gttctttcag
    11881 atcttgcaac cgttggttca gatcgtccgc tgcctgattc aacgcatccc tttggtcagg
    11941 cgggcagttc acacgcagtg aacggccaaa aatttggata tcgacgggtt gtgcagacat
    12001 gccaccttcc tgctgattga ctgcgctgcc ttcgtcttta gacccatggt ctgcgaaggg
    12061 gcgacactat agctaccctg atgagaagag acaagccctt ttctggtcca ccagggccca
    12121 aagtggtagc atatcatgaa tattcctccc tttgacgacg aatgcttatg tctatacaga
    12181 acgaaatgcc tggttacaac gaaatgaacc agtatctgaa ccaacaaggg acgggtctga
    12241 cccctgccga gatgcatggt ttaatcagtg ggatgatatg tggcggtaac gatgacagct
    12301 catggctgcc gctacttcac gacctgacga acgaaggcat ggctttcggt catgagctgg
    12361 cacaggcact gcgtaaaatg cactctgcca ccagcgatgc cctgcaggat gacggcttcc
    12421 tttttcagct ttatctgcct gatggcgatg atgtcagcgt tttcgatcgg gctgatgcat
    12481 tggcaggttg ggtcaatcac ttcctgcttg gtcttggcgt tacgcaaccg aagctggata
    12541 aagtgaccgg cgaaaccggt gaagctatcg acgatctgcg taacattgcg caactgggtt
    12601 acgacgaaga cgaagatcag gaagagcttg aaatgtcgct tgaagagatc atcgaatacg
    12661 ttcgtgttgc cgcgctgtta tgccacgaca cctttactca tccgcaaccg accgcgccag
    12721 aagtacaaaa accgactcta cactaaaaac aaaaaacgta aggagagtgt tatgagtgag
    12781 atatcccggc aagagtttca gcgtcgccgt caggccctgg tggagcaaat gcaacccggc
    12841 agcgccgcgc tgatttttgc tgcaccagaa gtaacacgta gcgccgacag cgaatacccc
    12901 tatcgtcaga acagtgactt ctggtacttc accggcttta acgaaccgga agcggtgctg
    12961 gtgctgatta aaagcgatga cactcataac cacagcgttc tgtttaaccg cgttcgcgac
    13021 ctgacggcgg agatctggtt tggccgtcgc ttaggccagg atgccgcgcc agagaaactg
    13081 ggcgttgacc gcgcactggc attcagcgaa atcaatcagc aactttatca actacttaac
    13141 ggcctggatg tggtttacca tgcccagggc gaatatgcat atgctgatga aatcatgaac
    13201 agtgcgctgg aaaaactgcg taaaggttcg cggcaaaatc tcaccgcacc ggcaacgatg
    13261 atcgactggc gtcctgttgt tcatgaaatg cgcctgttca aatcgccaga agagattgcc
    13321 gtactccgcc gcgcgggaga aatcaccgcc atggcacata cacgggcgat ggaaaaatgc
    13381 cgtccgggaa tgttcgagta ccatctggaa ggcgaaattc accacgaatt taaccgccac
    13441 ggtgcgcgct atccgtccta taacaccatt gtcggcagcg gtgaaaacgg ctgcattctg
    13501 cactacaccg aaaacgagag tgaactgcgc gacggtgacc tggtgttgat tgacgcgggt
    13561 tgtgaataca aaggttacgc gggcgatatt acccgcacct tcccggtcaa cggcaaattc
    13621 acccaggccc agcgtgaaat ctacgacatt gtgctggagt ctctcgaaac cagcctgcgc
    13681 ctgtatcgtc cgggaacttc cattctggaa gtcactggtg aagtggtgcg catcatggtt
    13741 agcggcctgg taaaactcgg cattctgaaa ggtgatgttg atgaactgat cgctcagaat
    13801 gcccatcgtc ctttctttat gcatggcctt agccactggt tagggctaga tgtccatgac
    13861 gttggcgttt atggtcagga tcgctcgcgc attctggaac cgggcatggt actgaccgta
    13921 gagccagggc tgtatattgc gccggatgca gaagtgccag aacaatatcg cggtatcggc
    13981 attcgtattg aagacgacat tgtgattacc gaaaccggta acgaaaacct caccgccagc
    14041 gtggtgaaaa agccggaaga aatcgaagcg ttgatggctg ctgcgagaaa gcaatgagcg
    14101 taatcatcgt cggtggcggc atggcgggcg cgacgctggc gctggctatt tcccggttaa
    14161 gtcacggggc gctgccggta catttgattg aagcgactgc gccagagtca catgctcatc
    14221 cgggctttga tggacgagcg atagcgctgg cggcgggtac ctgtcagcaa ctggcgcgca
    14281 tcggcgtctg gcaatctctg gcggattgcg caactgccat caccaccgtg catgtcagcg
    14341 atcgtggtca cgctggattt gtcaccctcg ccgcagaaga ttaccaactg gcggcgctgg
    14401 gacaggttgt cgaattgcac aatgtcgggc aacggctgtt tgcattgctg cgtaaagcac
    14461 ctggcgtaac gctgcattgc cctgatcgcg tggctaacgt tgcccgtact cagagtcacg
    14521 ttgaagtgac gctggaaagt ggcgagacgc tgacgggccg cgtgctggta gcagctgatg
    14581 gcacccattc agcgttagcc accgcgtgcg gcgttgactg gcagcaggag ccttacgaac
    14641 aactggccgt gattgccaac gttgcgactt ccgttgcgca cgaaggccgc gcttttgaac
    14701 gcttcacgca acatggcccg ctggcgatgt tgccgatgtc tgacggacgc tgttcgctgg
    14761 tctggtgtca tccactggaa cggcgcgaag aggtgctgtc gtggagcgac gagaagtttt
    14821 gccgtgaact ccagtcggcc tttggctggc gacttggaaa aattacccac gccggtaaac
    14881 gcagtgctta tccgctggcg ttaacccgcg ccgccagagc tattacccat cgtaccgtgc
    14941 tggtgggcaa tgcggcgcaa actctgcacc cgattgccgg gcaagggttt aacctcggta
    15001 tgcgagatgt catgagcctt gcggaaaccc tgactcaggc gcatgagcgc ggagaagaca
    15061 tcggtgatta cggcatattg tgccgctatc agcagcgtcg acagagcgat cgcgaagcaa
    15121 ccatcggcgt cacggacagc ctggtacatc tttttgccaa ccgttgggca ccgctggttg
    15181 tcgggcgcaa catcggactg atgacgatgg aattattcac cccggcacgc gatgtgctgg
    15241 cgcagcgcac cctcggttgg gtggcgcgtt gaaggcggtt ttaaggaata aacaatgcaa
    15301 tgtgttgatg tagccattgt tggtggcggc atggtggggc tggcggttgc ctgcggctta
    15361 caggggagcg gcttacgcgt tgccgtactg gagcagcgcg taccggaacc tctggcggcg
    15421 gatgcaccac cacaactgcg cgtttcggct atcaatgccg ccagcgaaaa attactcacc
    15481 cgtcttggcg tctggcagga cattctctct cgtagggcca gttgttatca cggtatggaa
    15541 gtgtgggaca aagacagttt tggtcacatt tcgtttgacg atcaaagcat gggctatagc
    15601 catcttgggc atatcgttga aaactcagtg attcactacg cgctgtggaa caaagcgcag
    15661 cagtcgtcag atatcactct gttggccccc gcagaattac agcaggtcgc ctggggagaa
    15721 aatgaaactt tcctgacgct gaaagatggc agcatgttaa cggcgcgtct ggtgattggc
    15781 gcggacggtg ctaattcctg gttgcgcaac aaagcagata tttcgctgac tttctgggat
    15841 tatcagcatc acgcgctggt agcgaccatt cgcacggaag aaccgcatga tgcggtggcg
    15901 cggcaggttt tccatggcga aggcattctg gcctttttac cgcttagcga tccgcatctt
    15961 tgctcaattg tctggtcact gtcgccagag gaagcgcagc ggatgcagca ggcaagtgaa
    16021 gatgaattta atcgcgcgtt aaatatcgct tttgataatc gcctgggctt atgcaaggtt
    16081 gagagcgcgc gtcaggtgtt cccactgacg gggcgttatg cgcgccagtt tgccgcgcac
    16141 cgtctggtgc tagtgggcga cgccgcgcat accattcacc cgctggcggg gcagggagta
    16201 aatctcggct ttatggatgc tgcagagctg attgctgaac tgaaacggtt gcatcgtcag
    16261 gggaaagaca tcgggcagta catttacctg cgccggtatg agcgtagccg caagcacagt
    16321 gcggcgctga tgctggctgg tatgcaggga ttccgcgatc tgttttccgg taccaatccg
    16381 gcgaaaaaac tgctgcgtga tattggtttg aaactggccg acacgcttcc tggcgttaaa
    16441 ccacaactta tccgccaggc aatgggatta aacgatttgc ctgaatggct gcgttaaaaa
    16501 tttctcttct gctgtttatt tgatacccat cacactttca tctcccggtt ttttcgccgg
    16561 gagattttcc tcatttgaaa taaactaatt tcacctccgt tttcgcatta tattttctaa
    16621 tgtcattatt ttttgattta gtgttttttg acattttttt agctcttaat attgccttat
    16681 tcaaattagc tttctaatgg catcatcttt atatagaaac tggtgtgttt tttggttttt
    16741 tattctgtcg cgattttggc gttttttaac cataagctaa tgtgatgatc aattttacct
    16801 tatggttaac agtctgtttc ggtggtaagt tcaggcaaaa gagaacgatt gcgttgggga
    16861 ccgggagtgg ctccgatgct gggtttcgtg gtgataattt caccatgaaa agttgtcagc
    16921 cccgcttatt caatgaggac aagatggcac aacagactcc tttgtacgaa caacacacgc
    16981 tttgcggcgc tcgcatggtg gatttccacg gctggatgat gccgctgcat tacggttcgc
    17041 aaatcgacga acatcatgcg gtacgtaccg atgccggaat gtttgatgtg tcacatatga
    17101 ccatcgtcga tctccgcggc agccgcaccc gggagtttct gcgttatctg ctggcgaacg
    17161 atgtggcgaa gctcaccaaa agcggcaaag ccctttactc ggggatgttg aatgcctctg
    17221 gcggtgtgat agatgacctc atcgtctact actttactga agatttcttc cgcctcgttg
    17281 ttaactccgc cacccgcgaa aaagacctct cctggattac ccaacacgct gaacctttcg
    17341 gcatcgaaat taccgttcgt gatgaccttt ccatgattgc cgtgcaaggg ccgaatgcgc
    17401 aggcaaaagc tgccacactg tttaatgacg cccagcgtca ggcggtggaa gggatgaaac
    17461 cgttctttgg cgtgcaggcg ggcgatctgt ttattgccac cactggttat accggtgaag
    17521 cgggctatga aattgcgctg cccaatgaaa aagcggccga tttctggcgt gcgctggtgg
    17581 aagcgggtgt taagccatgt ggcttgggcg cgcgtgacac gctgcgtctg gaagcgggca
    17641 tgaatcttta tggtcaggag atggacgaaa ctatttctcc tttagccgcc aacatgggct
    17701 ggactatcgc ctgggaaccg gcagatcgtg actttatcgg tcgtgaagcc ctggaagtgc
    17761 agcgtgagca tggtacagaa aaactggttg gtctggtgat gaccgaaaaa ggcgtgctgc
    17821 gtaatgaact gccggtacgc tttaccgatg cgcagggcaa ccagcatgaa ggcattatca
    17881 ccagcggtac tttctccccg acgctgggtt acagcattgc gctggcgcgc gtgccggaag
    17941 gtattggcga aacggcgatt gtgcaaattc gcaaccgtga aatgccggtt aaagtgacaa
    18001 aacctgtttt tgtgcgtaac ggcaaagccg tcgcgtgatt tacttttttg gagattgatt
    18061 gatgagcaac gtaccagcag aactgaaata cagcaaagaa cacgaatggc tgcgtaaaga
    18121 agccgacggc acttacaccg ttggtattac cgaacatgct caggagctgt taggcgatat
    18181 ggtgtttgtt gacctgccgg aagtgggcgc aacggttagc gcgggcgatg actgcgcggt
    18241 tgccgaatca gtaaaagcgg cgtcagacat ttatgcgcca gtaagcggtg aaatcgtggc
    18301 ggtaaacgac gcactgagcg attccccgga actggtgaac agcgaaccgt atgcaggtgg
    18361 ctggatcttt aaaatcaaag ccagcgatga aagcgaactg gaatcactgc tggatgcgac
    18421 cgcatacgaa gcattgttag aagacgagta acggctttat tcctcttctg cgggagagga
    18481 tcagggtgag gaaaatttat gcctcaccct cactctcttc gtaaggagag aggttcacaa
    18541 ttcactgcac gtttcaggaa ccatcgctca tgacacagac gttaagccag cttgaaaaca
    18601 gcggcgcttt tattgaacgc catatcggac cggacgccgc gcaacagcaa gaaatgctga
    18661 atgccgttgg cgcacaatcg ttaaacgcgc tgaccggcca gattgtaccg aaagatattc
    18721 agcttgcgac cccgccgcag gttggcgcac cggcgaccga atacgccgca ctggcagaac
    18781 tcaaggctat tgccagtcgc aataaacgct tcacgtctta catcggcatg ggttacaccg
    18841 ccgtgcagct accgccggtt atcctgcgta acatgctgga aaatccgggc tggtataccg
    18901 cgtacactcc gtatcaacct gaagtctccc agggccgcct tgaagcactg ctcaacttcc
    18961 agcaggtaac gctggatttg actggactgg atatggcctc tgcttctctt ctggacgagg
    19021 ccaccgctgc cgccgaagca atggcgatgg cgaaacgcgt cagcaaactg aaaaatgcca
    19081 accgcttctt cgtggcttcc gatgtgcatc cgcaaacgct ggatgtggtc cgtactcgtg
    19141 ccgaaacctt tggttttgaa gtgattgtcg atgacgcgca aaaagtgctc gaccatcagg
    19201 acgtcttcgg cgtgctgtta cagcaggtag gcactaccgg tgaaattcac gactacactg
    19261 cgcttattag cgaactgaaa tcacgcaaaa ttgtggtcag cgttgccgcc gatattatgg
    19321 cgctggtgct gttaactgcg ccgggtaaac agggcgcgga tattgttttt ggttcggcgc
    19381 aacgcttcgg cgtgccgatg ggctacggtg gcccacacgc ggcattcttt gcggcgaaag
    19441 atgaatacaa acgctcaatg ccgggccgta ttatcggtgt atcgaaagat gcagctggca
    19501 ataccgcgct gcgcatggcg atgcagactc gcgagcaaca tatccgccgt gagaaagcga
    19561 actccaacat ttgtacttcc caggtactgc tggcaaacat cgccagcctg tatgccgttt
    19621 atcacggccc ggttggcctg aaacgtatcg ctaaccgcat tcaccgtttg accgatatcc
    19681 tggcggcagg cctgcaacaa aaaggtctga agctgcgcca tgcgcactat ttcgacactc
    19741 tgtgtgtgga agtggccgac aaggcgggcg tactggcgcg tgccgaagcg gctgaaatca
    19801 acctgcgtag cgatatcctg aacgcggttg ggatcaccct tgatgaaacc accacgcgtg
    19861 aaaacgtaat gcagcttttc agcgtgctgc tgggcgataa ccacgggctg gagatcgaca
    19921 cgctggacaa agacgtggct cacgacagcc gctctattca gcctgcgatg ctgcgcgacg
    19981 acgaaatcct cactcatccg gtgtttaatc gctaccacag cgaaaccgaa atgatgcgct
    20041 atatgcactc gctggagcgt aaagatctgg cgctgaatca ggcgatgatc ccgctgggtt
    20101 cctgcaccat gaaactgaac gccgccgccg agatgatccc aatcacctgg ccggaatttg
    20161 ccgaactgca cccgttttgc ccgccggaac aggctgaagg ttatcagcag atgattgcgc
    20221 agctggctga ctggctggtg aaactgaccg gttacgacgc cgtttgtatg cagccgaact
    20281 ccggcgcaca gggcgaatac gcgggcctgc tggcgattcg tcattatcat gaaagccgca
    20341 acgaagggca tcgcgatatc tgcctgatcc cggcttctgc gcacggaact aaccccgctt
    20401 ctgcacatat ggcaggaatg caggtggtgg ttgtggcgtg tgataaaaac ggcaacatcg
    20461 atctgactga tctgcgcgcg aaagcggaac aggcgggcga taacctctcc tgtatcatgg
    20521 tgacttatcc ctctacccac ggcgtgtatg aagaaacgat ccgtgaagtg tgtgaagtcg
    20581 tgcatcagtt cggcggtcag gtttaccttg atggcgcgaa catgaacgcc caggttggca
    20641 tcacctcgcc gggctttatt ggcgcggacg tttcgcacct caacctgcat aaaactttct
    20701 gcattccgca cggcggtggt ggtccgggta tgggaccgat cggtgtgaaa gcgcatctgg
    20761 caccgtttgt accgggtcat agcgtggtgc aaatcgaagg catgttaacc cgtcagggcg
    20821 cagtttctgc ggcaccgttc ggtagcgcct ctatcctgcc aatcagctgg atgtacatcc
    20881 gcatgatggg cgcagaaggg ctgaaaaaag caagccaggt ggcaatcctc aacgccaact
    20941 atattgccag ccgcctgcag gatgccttcc cggtgctgta taccggtcgc gacggtcgcg
    21001 tggcgcacga atgtattctc gatattcgcc cgctgaaaga agaaaccagc atcagcgagc
    21061 tggatattgc caagcgcctg atcgactacg gtttccacgc gccgacgatg tcgttcccgg
    21121 tggcgggtac gctgatggtt gaaccgactg aatctgaaag caaagtggaa ctggatcgct
    21181 ttatcgacgc gatgctggct atccgcgcag aaattgacca ggtgaaagcc ggtgtctggc
    21241 cgctggaaga taacccgctg gtgaacgcgc cgcacattca gagcgaactg gtcgccgagt
    21301 gggcgcatcc gtacagccat gaagttgcgg tattcccggc aggcgtggca gacaaatact
    21361 ggccgacggt gaaacgtctg gatgatgttt acggcgaccg taacctgttc tgctcctgcg
    21421 taccgattag cgaataccag taattcactg attcgactat tttctaaagg cgcttcggcg
    21481 cctttttagt cagatgacaa agtacaaaag tgctcagaca gtcccctcgc ccctttgggg
    21541 agagggttag ggtgagggga acaggccggc actggcgcga atatttaccc tcaccccggc
    21601 cctctccctg aaagggcgag gggaaaagcg tgccaacatt gaagattgag ccagtttgtt
    21661 agcaatctca aagatacgtc aacgaattaa tttttctcgg aaaaacaaat ggctatagca
    21721 cttgtgaccg gtggcagtcg cggcatcggg cgggcaactg cattactgtt ggcgaaagaa
    21781 gagtatacgg tggcggttaa ttatcaacaa aacctccatg cggcgcagga agtggtgaac
    21841 ttaatcacgc aagccggtgg caaggcattc gtgctccagg cggatatcag cgacgaaaat
    21901 caggtcatcg caatgtttac agcaatcgat cagcacgatg aaccgctagc agcgctggtc
    21961 aataacgccg ggatcttgtt tacccagtgc accgttgaaa accttaccgc agagcgaatc
    22021 aaccgagtac tttccaccaa cgtgacggga tattttctct gctgccgcga ggcggtaaaa
    22081 cgcatggcgc ttaaaaatgg tggcagtggc ggcgctatcg tcaatgtctc ttcggtggcc
    22141 tcacggttgg gttcgccagg ggaataggtt gattacgcgg catcgaaagg ggcgattgat
    22201 acgttaacca ccggactatc gctggaagtc gccgcgcagg ggatccgcgt taactgcgtg
    22261 cggccagggt ttatttatac cgaaatgcac gccagcggcg gcgagcttgg acgcgtcgat
    22321 cgcgttaagt cgaacatccc catgcagcgt ggtggacagg cagaagaggt cgcgcaggcc
    22381 attgtctggc tactaagtga taaagcctct tacgtcacgg gaagttttat cgatttggcg
    22441 ggcgggaaat aaaacaggga agttgtctga ccggatgcaa caagtattgc atccggtact
    22501 tcatcgactt aaagcttctc gccgttgctg gcaatcacct ctttgtacca gttaaagctc
    22561 ttcttacgtg aacgcgacat atcgccagta ccgtcgtcat gtttattcac atagataaag
    22621 ccgtagcgtt tgctgtactg cccggtagtg aatgacacgc agtcgatgca gccccacggt
    22681 gtgtagccca tcagatccac accatcgtaa gtcactgctt ttttcatctc ttcaatatgg
    22741 gcgcgcaggt agtcaatgcg gtagtcgtcg ttgatgctgc catcttcttc cactttgtcg
    22801 taagcgccaa aaccgttttc gacaataaac agcggcctct gataacgctc atacagttcg
    22861 caaagggcat agcgcagacc tactggatca atctgccagc accagtcaga cgctttaaca
    22921 tacgggttcg gtacgctgcc ttcaaaacca gagatcgcat cgccggtgcc gccttcggcc
    22981 ttcactgcgt tgatcatgta atagctgaaa ccaagataat cgcaggtgcc ttcacgcagt
    23041 acatccagat cgccatcttc cattttgatg ttaaatccgc gacgctccca ctcgttcaac
    23101 acataggacg ggtaatagcc gcgtagctgc acatcggtaa agacgtagcg ttcgcgcatc
    23161 gactcctgag cgaacatcac atcgtccggg ttacaggagt aaggatagag cggcaccatc
    23221 gccagcatac agccgacttt catctccggg ttaatgcgac gcgcggcttt cactgctagg
    23281 gcgctggcga caaactggtg atgcagcacc tggtacatcg tctcttccgg gttgtcatgc
    23341 tcggtataca ccacgccgga gcagcagtaa ccaaacagcg gcgcacgcca gttacgctgg
    23401 ttgtttattt cgttgaaggt catccagtat ttgactttat gcttgtagcg ttcgaatacc
    23461 acttccgcga aacggacaaa gaaatcaacg actttacggt tggtccagct accgtattgc
    23521 tgcaccagat gcagcggtat ttcaaagtgg gagagggtta tcaccggttc gatgttgtat
    23581 ttcagcagtt catcgaacag agagtcgtaa aacttcagcc cttcttcgtt tggctgagct
    23641 tcatcacctt ttggaaaaat acgcgtccag gcgatggaag tccgaaaaca tttgaagccc
    23701 atttcggcaa atagcttgat gtcttccttg tagtgaccat aaaaatcaac ggcttcatgg
    23761 tttggatagt attttcctgg caagacttct ttggtgattt cgcgcggcac gccgtgtgcg
    23821 ccaccggtca gaacgtcaca aatgctcggt cctttgccgc ctttgttcca gccgccttcg
    23881 acctgatgag cggcaacggc gccaccccat aagaaatctt tcggtaaggt gagttttttc
    23941 actatcatag gctccagatg agtcaattct tacaggaaat agtaccatgc agccaaacga
    24001 catcactttt tctcaacgtt tccaggatga cattctggct gggcgtaaaa ccatcaccat
    24061 ccgcgacgag tctgaatcgc acttcaaaac gggtgatgtg cttcgtgtcg gacgttttga
    24121 agatgacggt tatttttgca cgattgaagt caccgcaacc tcaaccgtaa cgctggatac
    24181 gctgacggaa aaacatgcag agcaggaaaa tatgaccctg actgaactga taaaggtcat
    24241 tgccgacatc tatcccggtc agacacagtt ttatgtgatt gaatttaaat gtctttaaat
    24301 tgaactcacg cctgttagtt gaaatttctc atttaatttc atgattttta ggagattagt
    24361 ctcaaatcag aatttatttt agctaacagg tgttcactgg aactattctc agttacgctg
    24421 gagaggtata catgtgcgtg tacgtttctc cggagtaagt tatggttcag aagcccctca
    24481 ttaagcaggg atattcgctg gcagaggaaa ttgccaacag cgtcagtcac ggcattgggt
    24541 tggtgtttgg tatcgttggg ctggtgttgc tactggttca ggcggtggat ctcaatgcca
    24601 gcgccacagc gataaccagc tacagcctct atggcggcag tatgatcctg ctgttcctcg
    24661 cttcgacgct ctatcacgcc attcctcatc aacgggcaaa aatgtggctg aagaaatttg
    24721 accattgcgc tatttacctg ttgattgccg gaacctacac gccgtttttg ctggtggggc
    24781 tggattctcc gttagcgcgc gggttgatga ttgttatctg gagcctggca ttgctgggga
    24841 ttctgtttaa actgaccatc gcgcaccgat tcaaaatttt atctctggtg acctatctgg
    24901 cgatgggctg gctgtcgctg gtggtaattt atgaaatggc agttaagctc gcggcgggca
    24961 gcgttacctt actggcggta ggcggcgtgg tttattcgct cggagtgatt ttctatgtct
    25021 gcaaacgcat tccctacaat catgccatct ggcacggctt cgtgctcggc ggcagtatgt
    25081 gccactttct ggcgatctat ttgtatattg ggcaggcgta atgggtatgc ctttgtaggc
    25141 ctgataagac gcgccagcgt cgcatcaggc gataaatgcc tgatgcgata cagagattta
    25201 ctcttcgagt gaatacggca gcggctcgat atgcagtgta ttcgcatcgt cgcgtacgcg
    25261 gaagatgctg tccggttcca tatcgttatt catgacgacc tgtaccacga cctgaccatc
    25321 ttccagtttt accgcagcca gcaccgtacc ggtacgacgc cagttctcgc ccattttcag
    25381 ctctaagtct tcaccagctt ccggcagtcg gctggcgcta cctgccagca accagagcgc
    25441 acgtttattg gcaccacgga attttgctcg cgccaccatc tcttgtccgg tataacagcc
    25501 tttcttaaaa ctgataccgc ccagcgcctg gagattggtc gcctgtggga taaactgccc
    25561 gctgttcgcg gcatcaatca ccgggaaacc cgcttcaatg tttaatgcca gccactgttg
    25621 gctattgttc agttccgctt caccgcgcag tttatcggtc agcatattgg cagtagcttc
    25681 atcggttacg atcaggaaac gttctgccgg gtgttcaaac catagcaaag tggtcgcgcc
    25741 ttctttaact acctgttttt ctctcgaagg tagttcacta aagagattgg cgagcgcggc
    25801 gcgcgcctga aaaccggcaa caccaagcag cacacgctcg tcgtctgccg cgatggtcac
    25861 tttagagaac accgcatatt ttttcagttc agtcagctgc ggttcacgca cgctgcgccg
    25921 ttcaatccac gcaaagccat cgccgtcgcg gaacagacgt aaattgctcc acattttacc
    25981 tttggcgtcg caatgggcgg cgagcaggtg ctgattttct gtcatctggc tgacatctgc
    26041 tgtcacctga ccctgcatat atttttcgct gtccgcgcca gtaatggtgg caagcgccca
    26101 gtcatcaagc gtcatcagcg tcagcggtaa acgggcagaa gccgtaggct gacggggagg
    26161 aaaaggtgta aaagccataa tagagtcctg agttgcttaa cggcgtatta ataactaatg
    26221 gtaaaagagc tatgaggcaa tgcaagtgct ttcactacgc gatctgtgcc ttctgcgagg
    26281 cgacttccaa aaaaatgaag ctcttgaatt gttgtgaatt aatttcgcga tcgcgatggt
    26341 gtttactgat attcccgtaa aagaagtcga aaaacacgtt acaatagccg ggtactggat
    26401 tttcgtgaga caggaagaag atggacatta acaacaaagc ccgcattcat tgggcatgcc
    26461 gccgtggtat gcgcgaactc gatatttcaa tcatgccgtt tttcgaacat gagtacgaca
    26521 gcttaagcga tgacgaaaaa cgcatcttta ttcgtctgct ggaatgtgac gatccggacc
    26581 tgtttaactg gctgatgaat cacggtaaac cggccgatgc agaactggaa atgatggtcc
    26641 gactcatcca gacacggaac cgggaacgtg gtcctgtggc aatctgattt gcgcgtctcc
    26701 tggcgcgcac agtggctttc cttgctgatt catgggctgg ttgccgctgt tattttactc
    26761 atgccctggc cgctcagtta caccccgtta tggatggtgt tactttcgct ggtggtattt
    26821 gattgcgttc gcagccagcg gcgtattaat gctcgccagg gggaaattcg attgttgatg
    26881 gacgggcgtt tgcgttggca agggcaggag tggagcatcg tcaaagcacc gtggatgatt
    26941 aagagcggca tgatgctgcg tttacgttct gatggcggta aacggcaaca tttatggctg
    27001 gcagccgaca gcatggacga agctgaatgg cgggatttac ggcggatttt gttgcaacaa
    27061 gagacgcaaa gataaatatg acggcaaagc atatgcgcta agccgtcagt gagatcaggc
    27121 gtaatgctct gccatttcgt tgaggatttg ctcgcaccag ctctgaatac gctcgtcgct
    27181 aaggtcatac tggttagttt catccagcgc cagacccacg aacagttgcc cgtcagcaat
    27241 caccggtttc gggctggtaa attcatatcc ttccgttggc cagtagccga cgaacttcac
    27301 gcctttggtc gagagtttgt catgcagcat accgagcgca tcgaggaacc actcgccgta
    27361 tcccagttga tcgccaagcc catacagcgc aacaatttta ccttcaaggt tcaggtcgtc
    27421 gagctgatcc cagacggctt cccagtcttc ctggatttcg ccaaaatccc aggtcgggat
    27481 acccagaatg agcacatcgt actgctccat taatttcggg gagtcgtcct tgaggttatg
    27541 taaggtcacc agttctgggc cgataatatc gcggattttt tctgccgcca tttcggtgta
    27601 acaggtgctg gaaccgtaaa aaagacccat attcataacg taagcttctc gattctgctg
    27661 tggcttttgc ggctagtgta tcagaatcgc tttagtcacg gcacaataag gcataatgga
    27721 tcaaatgagt gaccataagg ggcgcaagtg aaacaggatc tggcacgcat cgagcagttt
    27781 cttgatgctc tgtggctgga aaaaaatctg gctgaaaata cgttgaacgc ttaccgtcgc
    27841 gatctgtcaa tgatggtgga gtggttgcat caccgcgggt tgacgctggc gacggcgcaa
    27901 agtgacgatt tgcaggcatt actggcagaa cggctagagg gcgggtataa agccaccagc
    27961 tcagcgcgtt tgctgagtgc agtgcgccga ttgttccagt atctttatcg cgaaaagttt
    28021 cgtgaagacg atcccagtgc gcatctcgct tcaccgaaat tgccacagcg tttgccaaaa
    28081 gatttaagcg aagcgcaggt cgaacgttta ttacaggcac cattaattga tcagccactg
    28141 gagctacgcg ataaagccat gcttgaagtg ttgtatgcta ccgggctgcg tgtctctgaa
    28201 ctggtcgggc tgacaatgag tgatatcagc ctacgtcagg gcgtagtgcg ggtcattggt
    28261 aaaggcaaca aagagcgcct ggtgccgtta ggtgaagagg ccgtttactg gctggaaacc
    28321 tatctggaac atgggcgtcc gtggctgttg aatggtgtgt caattgacgt gttgtttccc
    28381 agccagcgtg cgcagcagat gacgcgacag accttctggc accgcattaa acattatgcc
    28441 gtgctggcgg gtatcgacag cgaaaagctg tcaccgcatg tgttgcgtca cgcttttgcc
    28501 actcatttat taaatcatgg tgcggattta cgcgtggtgc agatgctact gggccacagc
    28561 gatctctcca ccacgcaaat ttatacgcat gtcgctaccg agcgtctgcg gcaacttcat
    28621 caacagcatc acccgcgggc gtgatgtctg aaaagaacgg gaagatttat gaagaaaggt
    28681 tttatgttgt ttactttgtt agcggcgttt tcaggctttg ctcaggctga tgacgcggca
    28741 attcaacaaa cgttagccaa aatgggcatt aaaagcagcg atattcagcc agcacccgtg
    28801 gctggcatga agactgtgct gactaacagc ggtgtgttgt acatcaccga tgacggtaaa
    28861 catatcattc aggggccaat gtatgacgtt agtggcgcgg ctccggtcaa tgtcaccaat
    28921 aaaatgctgc taaagcagtt gaatgcgctt gaaaaagaga tgatcgttta taaagcgccg
    28981 caggaaaaac acgtcatcac cgtgtttact gatattacct gtgggtactg ccacaaactg
    29041 catgagcaaa tggcagacta caacgcgctg gggatcaccg tgcgttatct tgctttcccg
    29101 cgccaggggc tggagagcca ggctgagcaa caaatgaaag ccatctggtg tgcgaaagat
    29161 aaaaacaaag cgtttgatga tgtgatggct ggtaaagctg ccactccggc aagttgcgat
    29221 atcgatattg ccgatcatta cgcacttggc gtccagcttg gcgttagcgg cactccggca
    29281 attgtgctga gcaatggcac acttgttccg ggttaccagc cgccgaaaga gatgaaagaa
    29341 ttcctcgacg aacaccaaaa aatgaccagc ggtaattaat tcgcgtgaaa caacagatac
    29401 aacttcgtcg ccgtgaagtc gatgaaacgg cagacttgcc cgctgaattg cctcccttgc
    29461 tgcgccgttt atacgccagc cggggagtac gcagtgcgca agaactggaa cgcagtgtta
    29521 aaggtatgtt gccctggcag caactaagcg gtgtcgaaaa ggccgttgag atcctttaca
    29581 acgcttttcg cgaaggaacg cggattattg tggtcggtga tttcgacgcc gacggcgcga
    29641 ccagcacggc tctaagcgtg ctggcgatgc gctcgcttgg ttgcagcaat atcgactacc
    29701 tggtaccaaa ccgtttcgaa gacggttacg gcttaagccc ggaagtggtc gatcaggccc
    29761 atgcccgtgg cgcgcagtta attgtcacgg tggataacgg tatttcctcc catgcggggg
    29821 ttgaacacgc tcgctcgttg ggcattccgg ttattgttac cgatcaccat ttgccaggcg
    29881 aaacattacc cgcggcggaa gcgatcatta accctaactt gcgcgactgt aatttcccgt
    29941 cgaaatcact ggcaggcgtg ggtgtggcgt tttatctgat gctggcgctg cgcacctttt
    30001 tgcgcgatca gggctggttt gatgagcgcg gcatcgcaat tcctaacctg gcagaactgc
    30061 tggatctggt cgcgctgggg acagtggcgg acgtcgtgcc gctggacgct aataatcgca
    30121 ttctgacctg gcaggggatg agtcgcatcc gtgccggaaa gtgccgtcca gggattaaag
    30181 cgctgctgga agtggcaaac cgtgatgcac aaaaactcgc cgccagcgat ttaggttttg
    30241 cgctggggcc acgtctcaat gctgccgggc gactggacga tatgtccgtc ggtgtggcgc
    30301 tgttgctgtg cgacaacatc ggcgaagcgc gcgtgctggc aaatgaactc gatgcgctaa
    30361 atcagacgcg aaaagagatc gaacaaggaa tgcagattga agccttgacc ctgtgcgaga
    30421 aactggagcg aagtcgcgac acgctacccg gcgggctggc aatgtatcac cccgaatggc
    30481 atcagggcgt tgtcggtatt ctggcttcgc gcatcaaaga gcgttttcac cgtccggtta
    30541 tcgcctttgc gccagcaggt gatggtacgc tgaaaggttc cggtcgctcc attcaggggc
    30601 tgcatatgcg tgatgcgctg gagcgattag acacactcta ccccggtatg atgctgaagt
    30661 ttggcggtca tgcgatggcg gcgggtttgt cgctggaaga ggataaattc gaactctttc
    30721 aacaacggtt tggcgagctg gttaccgagt ggctggaccc ttcgctattg caaggcgaag
    30781 tggtgtcaga cggcccgtta agcccggccg aaatgaccat ggaagtggcg cagctgctgc
    30841 gcgatgctgg cccgtggggg cagatgttcc cggagccgct gtttgatggt catttccgtc
    30901 tgctgcaaca gcggctggtg ggcgaacgtc atttgaaagt catggtcgaa ccggtcggcg
    30961 gcggtccgct gctggatggt attgctttta atgtcgatac cgccctctgg ccggataacg
    31021 gcgtgcgcga agtgcaactg gcttacaagc tcgatatcaa cgagtttcgc ggcaaccgca
    31081 gcctgcaaat tatcatcgac aatatctggc caatttagcg tcatcttctc tataaaaaag
    31141 agcgtggatt gggtacaatc ccgctcttat caccgcattt tgactagctc aataaaagaa
    31201 atcagaccat gtttgaaatt aatccggtaa ataatcgcat tcaggacctc acggaacgct
    31261 ccgacgttct tagggggtat ctttgactac gacgccaaga aagagcgtct ggaagaagta
    31321 aacgccgagc tggaacagcc ggatgtctgg aacgaacccg aacgcgcaca ggcgctgggt
    31381 aaagagcgtt cctccctcga agccgttgtc gacaccctcg accaaatgaa acaggggctg
    31441 gaagatgttt ctggtctgct ggaactggct gtagaagctg acgacgaaga aacctttaac
    31501 gaagccgttg ctgaactcga cgccctggaa gaaaaactgg cgcagcttga gttccgccgt
    31561 atgttctctg gcgaatatga cagcgccgac tgctacctcg atattcaggc ggggtctggc
    31621 ggtacggaag cacaggactg ggcgagcatg cttgagcgta tgtatttgcg ctgggcagaa
    31681 tcgcgtggtt tcaaaactga aatcatcgaa gagtcggaag gtgaagtggc gggtattaaa
    31741 tccgtgacga tcaaaatctc cggcgattac gcttacggct ggctgcgtac agaaactggc
    31801 gttcaccgcc tggtgcgtaa gagcccgttt gactccggcg gtcgtcgcca cacgtcgttc
    31861 agctccgcgt ttgtttatcc ggaagttgat gatgatattg atatcgaaat caacccggcg
    31921 gatctgcgca ttgacgttta tcgcgcgtcc ggcgcgggcg gtcagcacgt taaccgtacc
    31981 gaatctgcgg tgcgtattac ccacatcccg accgggatcg tgacccagtg ccagaacgac
    32041 cgttcccagc acaagaataa agaccaggcc atgaagcaga tgaaagcgaa gctttatgaa
    32101 ctggagatgc agaagaaaaa tgctgagaaa caggcgatgg aagataacaa atccgacatc
    32161 ggctggggca gccagattcg ttcttatgtc cttgatgact cccgcattaa agatctgcgc
    32221 accggggttg aaacccgcaa tacgcaggcc gtgctggacg gcagcctgga tcaatttatc
    32281 gaagcaagtt tgaaagcagg gttatgagga accaacatgt ctgaacaaca cgcacagggc
    32341 gctgacgcgg tagtcgatct taacaatgaa ctgaaaacgc gtcgtgagaa gctggcgaac
    32401 ctgcgtgagc agggaattgc cttcccgaac gatttccgtc gcgatcatac ctctgaccaa
    32461 ttgcacgcag aattcgacgg taaagagaac gaagaactgg aagcgctgaa catcgaagtc
    32521 gccgttgctg gccgcatgat gacccgccgt attatgggta aagcctcttt tgttaccctg
    32581 caggacgttg gcggtcgtat tcagctgtac gttgcccgtg acgatcttcc ggaaggcgtt
    32641 tacaacgagc agttcaaaaa atgggatctc ggcgacatcc tcggcgcgaa aggtaaactg
    32701 ttcaaaacca aaaccggcga actgtctatc cactgcaccg agctgcgtct gctgaccaaa
    32761 gcactgcgtc cgctgccgga caaattccac ggcttgcagg atcaggaagc gcgctatcgt
    32821 cagcgttatc tggatctcat ctctaacgat gaatcccgca acacctttaa agtgcgttcg
    32881 cagatcctct ctggcattcg ccagttcatg gtaaatcgcg gctttatgga agttgaaacg
    32941 ccgatgatgc aggtgatccc aggcggtgcc gctgcgcgtc cgtttatcac ccatcataac
    33001 gcgctggatc ttgacatgta cctgcgtatc gcgccggaac tgtacctcaa gcgtctggtg
    33061 gtcggtggct tcgagcgtgt attcgaaatc aaccgtaact tccgtaacga aggtatttcc
    33121 gtacgtcata acccagagtt caccatgatg gaactctata tggcttacgc agattacaaa
    33181 gatctgatcg agctgaccga atcgctgttc cgtactctgg cacaggatat tctcggtaag
    33241 acggaagtca cctacggcga cgtgacgctg gacttcggta aaccgttcga aaaactgacc
    33301 atgcgtgaag cgatcaagaa atatcgcccg gaaaccgaca tggcggatct ggacaacttc
    33361 gactctgcaa aagcgattgc tgaatctatc ggcatccacg ttgagaagag ctggggtctg
    33421 ggccgtatcg ttaccgagat cttcgaagaa gtggcagaag cacatctgat tcagccgacc
    33481 ttcattacta aatatccggc agaagtttct ccgctggcgc gtcgtaacga cattaacccg
    33541 gaaatcacag accgctttga gttcttcatc ggtggtcgtg aaatcggtaa cggctttagc
    33601 gagctgaatg acgcggaaga tcaggcgcag cgcttcctgg atcaggttgc cgcgaaagac
    33661 gcaggtgacg acgaagcgat gttctacgac gaagattacg tcaccgcact ggaacacggc
    33721 ttaccgccga cagcaggtct gggaattggt atcgaccgta tggtaatgct gttcaccaac
    33781 agccatacca tccgcgacgt tattctgttc ccggcgatgc gtccagtaaa ataagcatta
    33841 cgttatgcta ataaccccgg caaatgtcgg ggttttttaa ttgtgctgcg cgaaagcaga
    33901 caacaatttt cttgcttcac tattggctgc ctgcattacc atccacggac tgaacgccca
    33961 cggcgtggca tcaataccgt gtaatacatc tgctaaatca caccattgat aatccatcac
    34021 ttcatcatcg ttgatctgta acgcactgtt ggtgcgtgcg gcaaataccg gacacacttc
    34081 attttccaca atgccattcg gatcggtggc gcgatagcga aagtcaggat agatagattc
    34141 aggaggcgta atttccacgc caagctcata acggcaacgg cggatcactg cgtcttcgtt
    34201 gctttctccc agttgtgggt gcccacaaac cgagttagtc cacacgccag gccatgcttt
    34261 tttgctcagt gcgcggcggg taactaataa ttgccccttg gcattaaaca gccaactgga
    34321 gaacgcgaga tgtaagaggg tgtctgccgt gtgtgcggca tacttttcca gcgtacccgt
    34381 gggaactccc tgtgcattca ataaaatgac gtgttccgtt tgcataattt ctcacatgta
    34441 attctgatca ctcatcatta tagataattg aagagtgaaa tgattaacca agtgagcgtt
    34501 tatcgacaac cgcccgtttt gagcggatgc cgacaggtaa aaaccattta aaaaagtagc
    34561 atcatatatt tgaagcgact ttcaatggcc attgcaacac agtcagaaat gacaggaata
    34621 gagagagtaa aaagcaacag cagactgaat atagcgcgca ttaaaagatt tatattattc
    34681 tccatgctca tttttcttca gcttgcgcat cagaagccac atacgtactg tcctgacttt
    34741 taaatcttta tcagagacgg attccttcac caggtcagca tgatgctgat agccattaaa
    34801 gaagacgttc agcacaacgg cgctaagggt tgcgagcata atgccgctat gtagcagcgg
    34861 ttgcagtacg gccggtaact tagaaaagaa atcgtgagag agcgtcggag tcatgccaac
    34921 gccgagactg atcgccacaa tatagaggtt gtaacggttg gtggtgtagt tacagcgcga
    34981 cagaattcga atccctgtcg ccagtaccat gccgaacatc actagaccag cgccgcccag
    35041 cacaaattgc ggaatggagg ctaccagcac cgccattttt ggcaccatgc caaacaggat
    35101 taatataatt cccgaagaaa tacacaccca gcggctatga acgcgcgtca cgctaaccag
    35161 gccaacgttt tgagaaaatg acgtgtgggg gaagctgtta aacgtgccgc ctatcattgt
    35221 ccctacgcca tcgacacgca gcccgcgaat aatatcgtgt gaagagagtt tacgaccgac
    35281 tatttcaccc agtgccagga acatccccat cgactcgata aacacgatga ttaacacggc
    35341 agtcatggtc agaatggaaa cgggatcgaa aatcggcata ccaaacgaca tcggggtgac
    35401 aatcgcaaac cacaaggcat catgtagccc ggataaattg acttcattca tcatccacga
    35461 aagtaaaaag ccaaatacaa tccccagtaa tacggcgacg ttggacataa atcctttcgc
    35521 atagcgagta atgagcaaga taaaaattaa gacggcaaag gagatacctg aataaacggg
    35581 attaccatat tgcggattcc ctttacctcc ggcggcccag tcaataccca cctgaatgat
    35641 gctaagtccg acagaagtaa taaccacacc ggtaaccagt ggcgggaata aaggcatcaa
    35701 gcgaccgata agtggcgcta ataatgtggt gataaaaccc gcggcgatag tggcaccaaa
    35761 tatccccagc aggccaatat ccgggttcat cccaatggct atcattggtg ttacagcagc
    35821 aaaggtcacc gacataatca ccggcaggcg gatccccata aagcggccga taccgataca
    35881 ttgcaataat gtgacgatcc cgcagcaaaa gagatccgag ctaatgagca tcgcaatagc
    35941 ttcttttgag aggcccagtc ggtcaccaat cataagagga acagcgactg cacctgcgta
    36001 catgacaagg acgtgttgca gaccgagtat gatcagcttt cctggtgata atatgcggtc
    36061 aacctcatca gttgggcggt cttgcccaga agatgagaga agttgggaat ctatggcgct
    36121 catcagtgtt tctcctttcg cccgccagag taaaaagcaa ccgtttacgt taatgaaact
    36181 gtctaaacac atgctcgtgg agtgccagtt tttgcgagga aggggagtta gagacaggaa
    36241 ttgcggaggc aatcacataa tcgtggttaa accacgaaaa tgagaagaga acctgacaat
    36301 ggaattatct gtaattttct catattgata tttcattaat cattctggca tgtcgtactc
    36361 tcgcatttaa tcgtttttat ctggatagca ctcttttgat cggcaatgtt gaaataatga
    36421 aagcggcata gattgagggg caataatttg aactcagtcg caaaattata attaaaacgg
    36481 tcatgctacc taatatatgc ccgtt
//
LOCUS       DAJVUK010000022        36151 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.022, whole genome shotgun sequence.
ACCESSION   DAJVUK010000022 DAJVUK010000000
VERSION     DAJVUK010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36151
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.022"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(50..1699)
                     /gene="actP"
                     /locus_tag="OQQ57_001049"
     CDS             complement(50..1699)
                     /gene="actP"
                     /locus_tag="OQQ57_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HCS1955885.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAG
                     HLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
                     KKGATEREELRVSKITVLILGVIAIILGMLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGTMLGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH"
     gene            complement(1696..2010)
                     /locus_tag="OQQ57_001050"
     CDS             complement(1696..2010)
                     /locus_tag="OQQ57_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HCS1955886.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            complement(2142..4101)
                     /gene="acs"
                     /locus_tag="OQQ57_001051"
                     /pseudo
     CDS             complement(2142..4101)
                     /gene="acs"
                     /locus_tag="OQQ57_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418493.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
     gene            4494..5930
                     /gene="nrfA"
                     /locus_tag="OQQ57_001052"
     CDS             4494..5930
                     /gene="nrfA"
                     /locus_tag="OQQ57_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HCS1955887.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            5975..6541
                     /gene="nrfB"
                     /locus_tag="OQQ57_001053"
     CDS             5975..6541
                     /gene="nrfB"
                     /locus_tag="OQQ57_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HCS1955888.1"
                     /translation="MSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            6538..7209
                     /gene="nrfC"
                     /locus_tag="OQQ57_001054"
     CDS             6538..7209
                     /gene="nrfC"
                     /locus_tag="OQQ57_001054"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HCS1955889.1"
                     /translation="MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            7206..8162
                     /gene="nrfD"
                     /locus_tag="OQQ57_001055"
     CDS             7206..8162
                     /gene="nrfD"
                     /locus_tag="OQQ57_001055"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HCS1955890.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLVLWLAKIFEHDLLAQQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKSWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            8182..9900
                     /locus_tag="OQQ57_001056"
     CDS             8182..9900
                     /locus_tag="OQQ57_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HCS1955891.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQCALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDAASARICWRWALPGW
                     SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFRH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGPAVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQ
                     QMMEPSIRWNGIHDWYVVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GRKRDE"
     gene            9893..10276
                     /gene="nrfF"
                     /locus_tag="OQQ57_001057"
     CDS             9893..10276
                     /gene="nrfF"
                     /locus_tag="OQQ57_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HCS1955892.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            10273..10869
                     /gene="nrfG"
                     /locus_tag="OQQ57_001058"
     CDS             10273..10869
                     /gene="nrfG"
                     /locus_tag="OQQ57_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HCS1955893.1"
                     /translation="MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRD
                     PLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL
                     RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            11210..12523
                     /gene="gltP"
                     /locus_tag="OQQ57_001059"
     CDS             11210..12523
                     /gene="gltP"
                     /locus_tag="OQQ57_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HCS1955894.1"
                     /translation="MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(12714..13345)
                     /locus_tag="OQQ57_001060"
                     /pseudo
     CDS             complement(12714..13345)
                     /locus_tag="OQQ57_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313087.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            complement(13439..15586)
                     /gene="fdhF"
                     /locus_tag="OQQ57_001061"
     CDS             complement(13439..15586)
                     /gene="fdhF"
                     /locus_tag="OQQ57_001061"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(15167..15169),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HCS1955895.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNA
                     INEIDNTDLVFVFGYNPADSHPIMANHVINAKRNGAKIIVCDPRKIETARIADMHIAL
                     KNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS
                     EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRG
                     QNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAH
                     GEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGE
                     HEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHL
                     CPDFYGATYEKMGEQGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPI
                     DKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEA
                     LVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGSCNELVTENLSPITKTPEYKYCA
                     VRVEPIADQRAAEQYVIDEYNKLKTRLREAALA"
     gene            complement(15784..17250)
                     /gene="mdtP"
                     /locus_tag="OQQ57_001062"
     CDS             complement(15784..17250)
                     /gene="mdtP"
                     /locus_tag="OQQ57_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdtP"
                     /protein_id="HCS1955896.1"
                     /translation="MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKL
                     ADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDA
                     GSQLQVAALGMLNRQRVSANGFLSPYAMDAPSLGMDGPYYTEATVGLFAGLDLDLWGV
                     HRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVIDYAV
                     KAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRESLRALIGAGASDMPE
                     IKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAF
                     FGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVL
                     NAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPV
                     LAEEMSLLMLDSRRVIHSIQLMKSLGGGYQAAPVVEKK"
     gene            complement(17247..19298)
                     /gene="mdtO"
                     /locus_tag="OQQ57_001063"
     CDS             complement(17247..19298)
                     /gene="mdtO"
                     /locus_tag="OQQ57_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter permease subunit
                     MdtO"
                     /protein_id="HCS1955897.1"
                     /translation="MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVI
                     LISMTFEIPFVALSLAVLFYSIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEP
                     LIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCI
                     VVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREAL
                     ALQKLNVFCLADDANWRTQSAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKL
                     ASEINKLQHAVAEGQCWQSDWRISESEAVAARECNLENICQTLLQLGQMNPNTPPTPA
                     AKPPSMVADAFTNPDYIRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVG
                     SSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERS
                     SYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEART
                     LPQKLAGALGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLD
                     SEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGL
                     ATALSCSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGAT
                     Q"
     gene            complement(19298..20329)
                     /gene="mdtN"
                     /locus_tag="OQQ57_001064"
     CDS             complement(19298..20329)
                     /gene="mdtN"
                     /locus_tag="OQQ57_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter periplasmic adaptor
                     subunit MdtN"
                     /protein_id="HCS1955898.1"
                     /translation="MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYA
                     SADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQI
                     MLTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTA
                     QRAAEADLNAVLLQAQSAASAVSGVDVLVAQRAAVEADIALTKLHLEMATVRAPFDGR
                     VISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKT
                     FEGKVDSIGYGVLPNDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGA
                     SAVANLEPQ"
     gene            complement(20348..20623)
                     /locus_tag="OQQ57_001065"
     CDS             complement(20348..20623)
                     /locus_tag="OQQ57_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955899.1"
                     /translation="MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
                     FCAIASLILTLITRRIIQRANINLAFVGIIYTALFAVYAMLFWLAFF"
     gene            complement(20832..22817)
                     /gene="yjcS"
                     /locus_tag="OQQ57_001066"
     CDS             complement(20832..22817)
                     /gene="yjcS"
                     /locus_tag="OQQ57_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase YjcS"
                     /protein_id="HCS1955900.1"
                     /translation="MNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVN
                     QNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKPYYRGEDYKFDINAPAPETV
                     NPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPSAKAA
                     LDLYFQNRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISE
                     NVLAGNIMSHRALYSYGLLLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMI
                     IDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWT
                     EYLNETLDMWGNDAEVLFMPHTWPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYT
                     MNEIGDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMG
                     KRYVQALGGSARVISLAQEANKQGDYRWSAELLKQVIAANPGDQVAKNLQANNFEQLG
                     YQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDFMSVRLDSAKA
                     AGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKMA
                     DLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTPN"
     gene            23070..23387
                     /locus_tag="OQQ57_001067"
     CDS             23070..23387
                     /locus_tag="OQQ57_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HCS1955901.1"
                     /translation="MQPVFLFKKRTGAMGGHVAGTAGFCVAVPAFYSWSMSEVIDKDT
                     RSSERTDYPHYASEVALAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQ
                     RRN"
     gene            23456..23785
                     /gene="yjdP"
                     /locus_tag="OQQ57_001068"
     CDS             23456..23785
                     /gene="yjdP"
                     /locus_tag="OQQ57_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YjdP"
                     /protein_id="HCS1955902.1"
                     /translation="MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDR
                     GRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERR
                     MEDEYGR"
     gene            complement(23932..24690)
                     /gene="phnP"
                     /locus_tag="OQQ57_001069"
     CDS             complement(23932..24690)
                     /gene="phnP"
                     /locus_tag="OQQ57_001069"
                     /EC_number="3.1.4.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism protein PhnP"
                     /protein_id="HCS1955903.1"
                     /translation="MSLTLTLTGTGGAQGVPAWGCECVACARARRSPQYRRQPCSGVV
                     KFNDAITLIDAGLHDLADRWPPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPP
                     DEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA
                     WLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRSPRV
                     ILTHISHQFDAWLMENALPSGFEAGFDGMEIGVA"
     gene            complement(24692..25141)
                     /gene="phnO"
                     /locus_tag="OQQ57_001070"
     CDS             complement(24692..25141)
                     /gene="phnO"
                     /locus_tag="OQQ57_001070"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HCS1955904.1"
                     /translation="MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRD
                     PSMRYPSMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQACGLNVGSKL
                     LAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL"
     gene            complement(25128..25685)
                     /gene="phnN"
                     /locus_tag="OQQ57_001071"
     CDS             complement(25128..25685)
                     /gene="phnN"
                     /locus_tag="OQQ57_001071"
                     /EC_number="2.7.4.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 1,5-bisphosphokinase"
                     /protein_id="HCS1955905.1"
                     /translation="MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASA
                     GSENHIALSEREFFTRAGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHL
                     PQARARYQSALLPVCLQVSPEILRQRLKNRGRENTSEINARLARAARYTPQDCHTLNN
                     DGSLRQSVDTLLTLIHQKEKHHACL"
     gene            complement(25685..26821)
                     /gene="phnM"
                     /locus_tag="OQQ57_001072"
     CDS             complement(25685..26821)
                     /gene="phnM"
                     /locus_tag="OQQ57_001072"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HCS1955906.1"
                     /translation="MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEG
                     GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLNAVAIGDVR
                     DGGDQLENLEKMINTIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLV
                     SLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAAL
                     CRARQIALASHDDATHAHVAESHQLGSVIAEFTTTFEAAEASRKHGMNVLMGAPNIVR
                     GGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDESNRFTLPQAVRLVTKN
                     PAQALNLQDRGVIGEGKRADLVLAHRQGNHIHIDHVWRQGKRVF"
     gene            complement(26818..27498)
                     /gene="phnL"
                     /locus_tag="OQQ57_001073"
     CDS             complement(26818..27498)
                     /gene="phnL"
                     /locus_tag="OQQ57_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HCS1955907.1"
                     /translation="MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSG
                     SGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVI
                     PRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
                     ARGFIVDYPILLLDEPTASLDAKNSAAVVELIHEAKARGAAIVGIFHDEAVRNDVADR
                     LHPMGASS"
     gene            complement(27609..28367)
                     /gene="phnK"
                     /locus_tag="OQQ57_001074"
     CDS             complement(27609..28367)
                     /gene="phnK"
                     /locus_tag="OQQ57_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HCS1955908.1"
                     /translation="MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
                     TTLLKSISARLTPQQGEIHYESRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSA
                     GGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL
                     VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLV
                     MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
     gene            complement(28364..29209)
                     /gene="phnJ"
                     /locus_tag="OQQ57_001075"
     CDS             complement(28364..29209)
                     /gene="phnJ"
                     /locus_tag="OQQ57_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HCS1955909.1"
                     /translation="MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPM
                     PYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDAT
                     LIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED
                     IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPP
                     FTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
                     EAKNQ"
     gene            complement(29202..30260)
                     /gene="phnI"
                     /locus_tag="OQQ57_001076"
     CDS             complement(29202..30260)
                     /gene="phnI"
                     /locus_tag="OQQ57_001076"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate synthase subunit PhnI"
                     /protein_id="HCS1955910.1"
                     /translation="MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLA
                     VDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLE
                     RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA
                     RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRN
                     HPFAGEIRSGYIDVSIMPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLV
                     FGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVD
                     FQAELELLKRLQQEQNHG"
     gene            complement(30260..30844)
                     /gene="phnH"
                     /locus_tag="OQQ57_001077"
     CDS             complement(30260..30844)
                     /gene="phnH"
                     /locus_tag="OQQ57_001077"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HCS1955911.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHTNAPLVNQSELATFAVTDEAIS
                     SEQLNALSSGTAVAPEAGATLILQVVSLSGGRMLRLTGAGIAEERMIAPQLPECILHE
                     LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC"
     gene            complement(30841..31293)
                     /gene="phnG"
                     /locus_tag="OQQ57_001078"
     CDS             complement(30841..31293)
                     /gene="phnG"
                     /locus_tag="OQQ57_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HCS1955912.1"
                     /translation="MHADIATRQHWMSMLAHSQPAELAARLNALNITANYEVIRTAET
                     GLVQIQPRMGGTGERFFAGDATLTRAAVRLTDGPLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA"
     gene            complement(31294..32019)
                     /gene="phnF"
                     /locus_tag="OQQ57_001079"
     CDS             complement(31294..32019)
                     /gene="phnF"
                     /locus_tag="OQQ57_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HCS1955913.1"
                     /translation="MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAAR
                     FEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPT
                     SEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGIALCLIDHYFADLTLWPTLQ
                     RFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDG
                     ESSPAEYSVSLTRADMIEFTMEH"
     gene            complement(32040..32819)
                     /gene="phnE"
                     /locus_tag="OQQ57_001080"
     CDS             complement(32040..32819)
                     /gene="phnE"
                     /locus_tag="OQQ57_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HCS1955914.1"
                     /translation="MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDG
                     GNMATFVADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWW
                     VYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAI
                     EPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIG
                     VTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI"
     gene            complement(32945..33961)
                     /gene="phnD"
                     /locus_tag="OQQ57_001081"
     CDS             complement(32945..33961)
                     /gene="phnD"
                     /locus_tag="OQQ57_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1955915.1"
                     /translation="MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQ
                     NLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRA
                     NGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVP
                     GYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKE
                     LKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASS
                     DLQLVPIRQLALFKEMQGVKSNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVS
                     KAVQ"
     gene            complement(33986..34774)
                     /gene="phnC"
                     /locus_tag="OQQ57_001082"
     CDS             complement(33986..34774)
                     /gene="phnC"
                     /locus_tag="OQQ57_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HCS1955916.1"
                     /translation="MQTIIRVEKLAKTFNQHQALHAVDLNIHHSEMVALLGPSGSGKS
                     TLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLS
                     VLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
                     VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALR
                     YCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRIEENAKAA"
     gene            complement(34907..35350)
                     /gene="yjdN"
                     /locus_tag="OQQ57_001083"
     CDS             complement(34907..35350)
                     /gene="yjdN"
                     /locus_tag="OQQ57_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HCS1955917.1"
                     /translation="MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ"
     gene            complement(35510..35845)
                     /locus_tag="OQQ57_001084"
     CDS             complement(35510..35845)
                     /locus_tag="OQQ57_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HCS1955918.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDTEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
BASE COUNT         7817 a         9692 c        10210 g         8432 t
ORIGIN      
        1 ctggagagga agagtattcc ccggtcaggc gaccggggaa ggggagagat taatgtgcgc
       61 ggccttgctc aacgccaaag ccggtctggg agcggataaa ctgcgcacgg aacagttcac
      121 gctcgcgcgc accttccgct gagttatcgg ttgccgagaa gaaccagatg ccgaggaatg
      181 ccacgctgat agagaacagc gccgggtatt catacgggaa gatggctttt tcgtgaccga
      241 ggatctgtac ccaaatagtc gggccgagga tcatcagcac cactgcggta atcaacccca
      301 gccagccgcc cagcatcgtg ccacgggtag tcagtttcga ccagtacatg gaaagcagaa
      361 tgatcgggaa gttacagctc gccgcgatgg caaacgcaag gcctaccata aaggcgatgt
      421 tctgattctc aaacagcatg ccgaggataa tcgcaatcac acccaaaatc aggacggtga
      481 ttttcgatac ccgcagttct tcacgttcgg tcgcaccttt tttgaagacg ttagcgtaca
      541 agtcatgcga aaccgcggat gcgcccgcca gcgtcagacc cgcaaccacc gcgaggatag
      601 tggcgaaagc aaccgctgaa ataaaaccga ggaacaggtt gccgcccact gcattcgcca
      661 ggtgaacggc cgccatgttg ttaccaccaa tcagatggcc cgccgcgtct ttatattccg
      721 gattcgcacc aaccagcatg atcgcgccga agccgataat aaaggtcaga atatagaagt
      781 agcccataaa cccggtggcg tagaacacgc tcttacgtgc ttcgcgggca tcgctgactg
      841 taaagaagcg catcagaatg tgcggcaagc ccgccgtacc aaacatcagt cccagaccca
      901 gagagagcgc ggagatcgga tctttcacca gcccgcccgg cttcatgatg tcgacacctt
      961 tcgggtgtac cgccatcgct tcgctgaaca gattattgaa gctaaagccg acgtgtttca
     1021 tcaccataaa ggccataaag ctggcaccga acagcaacag cacggcttta ataatttgca
     1081 cccaggtggt cgccagcatg ccgccgaaca ggacgtacat catcatcagc acgccgacca
     1141 gcaccaccgc aatgtgatag ttaaggccaa acagcagctc gatcagttta cctgcgccta
     1201 ccatctgggc gataaggtaa agcgccacca ccaccagaga accacaggcc gaaagaatac
     1261 gaatcggccc ttgtttcagg cggtaagagg ctacatcggc aaaggtgtag cgtcccaggt
     1321 tacgcagacg ttcggcaatc aggaacaaaa tgatcggcca gcccaccagg aagcccagcg
     1381 agtaaattaa gccgtcatag ccggaggtaa acaccagcgc ggagatcccc aaaaatgagg
     1441 cggcggacat atagtcaccg gcaatcgcca gcccgttctg gaagcctgtg atattgccgc
     1501 ctgccgtgta gtagtcgcta cgagaacgta cgcgttttga tgcccagtag gtaatgccga
     1561 gcgtaaacac gacgaaaatc aggaacataa taatcgcctg ccagttcgtt ggctggcgct
     1621 ctacggcccc gctaatagca tccgcggcgt tagctgcgaa agggagtgtg gcggcaagcg
     1681 ccgtcagaac tcttttcatg atgcttgtac ctcatgcagg acttcattat taagacggtc
     1741 gaattcgccg ttcgcccgcc agatgtagat accggtgaga acaaaggaga tcacaatcac
     1801 tccaacacca attggaatac cgcgtgtgac gctggtgttc ggattcagcg gcgtgcccag
     1861 ccagccgggc gcgaaggcga tcagtaaaat aaagccgata taaactgcca gcataataat
     1921 cgacaggatg gtggcaaacc gttgccgttt ttcgactaac tccctgaaat gcgcattgtc
     1981 ttctatccgc tgataaatag tgccattcat cacagattct ccagaggtaa tgtagggatt
     2041 gttttaattc ccgctccctt atgggagaag gttaacgctc gggtaaccct tgccgaatgt
     2101 aggccggata aggcgtttac gccgcatccg gcaattgtgg gttacgatgg catcgcgata
     2161 gcctgcttct cttcaagcag cttctcgact acgccaggat cggcaagcgt cgaggtatcg
     2221 cccaggttgc tggtatcgcc cgccgcaatt ttgcgcagaa tacggcgcat aattttgccg
     2281 gagcgggttt taggcaggga gtcggtccag tgcagcacgt ctggcgtcgc cagcgggcca
     2341 atctctttac gcacccagtt gcggacttct gcgtacagtt ctggtgacgg ttcctccccg
     2401 tgattaagcg tgacgtaggc gtagatcgcc tgacctttaa tattgtgcgg aatacctact
     2461 acggcggctt cggcaatctt cggatgcgcc accagcgccg actcaatctc tgccgtcccc
     2521 agacggtgac cggagacgtt cagcacgtcg tccacacgcc cggtgatcca gtaatagcca
     2581 tcttcatcgc gacgcgcgcc gtcgccgctg aaatacatat ttttgaaggt ggagaagtag
     2641 gtctgttcaa aacgttcgtg atcgccaaac agcgtacgcg cctgacccgg ccaggagtcg
     2701 gtgatcacca ggctgccttc ggtagcgcct tccagcgggt taccttcgtt atcgaccagc
     2761 gccggttgca cgccgaagaa cggacgtgtt gccgaaccgg ctttcagccc ggtagcgcca
     2821 ggcagtggcg tgatcatgaa accgccagtt tcggtctgcc accaggtatc gaccaccgga
     2881 catttctcgt tgccgatttt tttccagtac cactcccacg cttccgggtt aattggctcg
     2941 cccacggaac cgagaatgcg cagcgacgaa cggtcggtac cctcgatcgc tttatcgcct
     3001 tccgccatca gcgcgcggat cgccgtgggt gcggtataga gaatattgac ctgatgcttg
     3061 tccaccacct gcgccatacg ggcaggcgtc ggccagttgg gtacgccttc aaacatcagc
     3121 gtggtcgcac cgcaggccag cgggccgtac agcaagtaac tgtgtccggt cacccagccc
     3181 acatcggcgg tgcaccagta gatatcaccc ggatgataat caaagacata tttaaaggtc
     3241 agcgccgcgt acaccagata accgccggta gtatgcagca caccttttgg cttaccggta
     3301 gaaccggagg tgtagagaat aaacagcgga tcttcggcgt tcatctcttc cgcttggtgc
     3361 tgatcgctcg cttgctcaac caggtcgtgc caccacaggt cgcgcccttc ctgccagtca
     3421 attttcccgc cagtacgctt cagtaccacc acatgctcta cgctggtgac gttcgggttt
     3481 ttcagcgcgt catcaacgtt tttcttcagc ggaatactgc cgcccggcac gcacaccttc
     3541 gtcggaagtg atcaccagtc gtgagttgga atcaataatg cgcccggcaa cggcttccgg
     3601 cgagaagccg ccgaaaatca ccgaatgcac cgcgccaatg cgggcgcagg ccagcatcgc
     3661 aaccgcggct tccggcacca tcggcatata aatcgccacc acatcacctt ttttaatgcc
     3721 cagctcgagc agggtattgg cgaagcggca gacgtcgcgg tgcagctctt tatagctgat
     3781 atgtttgctc tggctgacgt cgtcgccttc ccagatgatg gcggtacgat cgccgttttc
     3841 ttgcagatgg cggtcaaggc agtttgccgc cagattcagc gtgccgtcct cgtaccattt
     3901 aatggacaca ttaccggggg caaaggaggt gtttttcacc ttctggtaag gtttgatcca
     3961 gtcaagaatt tttccctgtt cgccccagaa ggtatcaggt acgttaatag attgttgata
     4021 cattgcctcg tactgctgag ggtttatcag gcaacggtct gcgatgttgg caggaatggt
     4081 gtgtttgtga atttggctca tgcttttgtt ctccttgtag aatgttaata atatgtgaca
     4141 taagcgttaa atgtaggggt attggcagtt ttgtttagta tttgggcgac agatcacgca
     4201 aaagtagaat tgtgcaaata aacggcaggg taatttttga aggtcagcaa caaaagttga
     4261 ttaattcttt gaggaacatg cagttatgca tgctgttgaa aaagaggaag atactgacta
     4321 actctaaagt ggtattttac atgcacttac aattgattaa agacaacatt cacagtgtgg
     4381 ttatttgtta cacatagggg cgagcaatgt catgacagtg taggtgcggt tactgtcgtg
     4441 aaaaacaata aaaaccgcca ttgcaacaat ggcgcaattc ggatgaagcc cctatgacaa
     4501 ggataaaaat aaacgcacgc cgtatcttca gcttattgat tccttttttc tttttcactt
     4561 ctgttcacgc tgaacaaacg gcagctcccg caaaacctgt aactgtggaa gcgaagaatg
     4621 aaacctttgc cccgcagcat cccgatcaat atctctcctg gaaagccacc tcggaacagt
     4681 cagagcgtgt tgacgccctg gcggaagatc cacggctggt gatcctgtgg gcggggtatc
     4741 ccttctcgcg cgattacaac aagccgcgtg gacatgcctt tgctgtgacc gatgtgcgtg
     4801 aaaccctgcg taccggtgcg ccgaaaaatg ctgaagatgg tccgctaccg atggcgtgct
     4861 ggagttgtaa aagcccggat gtggcgcgtc tgatccagaa agacggcgaa gatggctact
     4921 tccacggtaa gtgggcgcgc ggcggcccgg aaatcgtcaa caacttaggt tgtgccgact
     4981 gccataacac cgcctcacca gagttcgcca aaggcaaacc ggagttaacc ctttcccgtc
     5041 cgtatgcggc tcgcgcgatg gaagccattg gtaaaccttt tgagaaagcc ggacgtttcg
     5101 accagcaatc gatggtttgc ggtcagtgcc atgtggagta ttacttcgac ggcaaaaaca
     5161 aagcggttaa attcccgtgg gatgacggca tgaaagtcga aaatatggag cagtattacg
     5221 acaaaattgc cttctctgac tggactaact ccctgtcgaa aacgccaatg ctgaaagcgc
     5281 agcacccgga atatgaaacc tggacagcgg gcattcacgg taaaaacaac gtgacctgta
     5341 tcgactgcca tatgccaaaa gtgcagaacg ccgaaggcaa actctacacc gaccataaaa
     5401 ttggtaatcc gtttgataac ttcgcccaga cttgtgcgaa ctgccatacc caggacaaag
     5461 ctgccttgca aaaagtggtc gcggaacgta agcagtcgat taacgacctg aaaatcaagg
     5521 ttgaagatca actggttcac gctcacttcg aagcgaaagc agcgctggat gcaggcgcga
     5581 cggaagctga aatgaagcca attcaggacg atatccgtca tgcccagtgg cgctgggatc
     5641 tggcgatcgc ttcccacggc attcatatgc acgcaccgga agaaggttta cggatgctcg
     5701 gtacggcgat ggataaagcg gcggatgcac gcaccaaact ggcgcgcctg ctggcgacca
     5761 aaggcatcac ccatgaaatc cagatcccgg atatctcaac caaagagaaa gcccagcagg
     5821 ccattggcct gaacatggaa caaatcaagg ccgagaagca ggacttcatc aaaacggtga
     5881 tcccgcagtg ggaagaacag gcacgtaaaa acggtctgtt aagccaataa ccccgttccg
     5941 cctcgcaagg ggcggaaaac acaatggagt gaatatgagc gtattacgtt cgttattaac
     6001 tgctggggtg ctggcgtcgg gcctgttgtg gagcctgaac ggaattaccg ctacccctgc
     6061 ggcgcaggca tctggtgatc gctacgaagt tacccagcag cgtaacccgg atgccgcctg
     6121 tctggactgt cataaaccag ataccgaagg tatgcatggc aaacatgctt ccgttatcaa
     6181 cccgaataac aaattgccgg tcacctgcac caactgtcac ggccagccat caccgcaaca
     6241 ccgcgaaggg gtgaaagatg tgatgcgctt taacgagccg atgtacaagg tcggagagca
     6301 gaacagcgtc tgtatgtcct gtcatctgcc ggaacagttg caaaaagcgt tctggccgca
     6361 cgatgtccac gtaaccaaag tggcgtgcgc cagctgccat tccctgcatc cacagcaaga
     6421 tacgatgcag acgttaagtg acaaaggacg gattaagatt tgcgtcgatt gccacagcga
     6481 tcagcgcacc aatccgaact ttaacccggc gtctgttccg ttgcttaagg agcagccatg
     6541 acctggtctc gtcgccagtt tctcaccggc gtcggcgtgc tggcagccgt cagcggcacc
     6601 gcagggcgcg tggtggcgaa aacgttgaat atcaatgggg tgcgttacgg catggtgcat
     6661 gacgagtcgt tatgcatcgg ctgtaccgcc tgtatggatg cttgtcgaga agtgaacaag
     6721 gtgccggaag gcgtctcgcg cctgacgatt attcgtagcg agccgcaggg cgaatttcct
     6781 gatgtgaaat atcgcttctt ccgtaagtct tgccagcact gcgatcatgc gccgtgcgtt
     6841 gacgtctgcc cgaccggtgc gtcttttcgt gatgccgcta gcgggattgt cgatgttaat
     6901 cctgatctct gcgtcggttg tcagtactgc atcgccgcct gtccgtaccg cgtgcgcttt
     6961 atccatccgg tcacgaagac ggcggacaaa tgcgatttct gccgtaaaac caatttgcag
     7021 gccggtaagc tgcccgcgtg cgttgaggct tgcccgacga aggcgctgac gtttggcaat
     7081 ctggacgatc ctaacagtga gatttcgcaa ctgctgcgcc agaagcctac ttaccgctac
     7141 aagctggcgc tgggaaccaa accgaagctg taccgcgtac cgtttaaata cggggaggtg
     7201 agccaatgac gcagacttcc gcatttcatt ttgaatcgct ggtgtgggac tggccgattg
     7261 ccatctacct gtttttgatt ggtatttctg ccggtctggt gacgctggcc gtgctgttac
     7321 gtcgcttcta cccgcaggcg ggcggtgcag acagtacgtt gctgcgcacc acgctgattg
     7381 tcgggccggg cgcggtgatc ctcggtctgt tgatcctcgt cttccacctg acaagaccgt
     7441 ggaccttctg gaagctgatg ttccactaca gttttacctc ggtgatgtcg atgggggtga
     7501 tgctgtttca gctttacatg gtggtgctgg tgctgtggct ggcgaaaatc tttgaacatg
     7561 atttgcttgc ccagcaacaa cgctggttgc cgaagctggg gatcgtgcaa aaggttctga
     7621 gcctgctgac gcccgttcat cgcggactgg aaacgctgat gctggtgttg gcggtgctgc
     7681 tgggggctta taccggcttt ctgctgtcgg cgctgaaatc gtatccgttc ctcaataacc
     7741 cgatcctgcc ggtgctgttc ctcttctccg gcatctcgtc cggtgcggcg gtggcgctga
     7801 tcgccatggc gatacgccaa cgcagtaacc cgcattccac ggaagcgcac tttgttcacc
     7861 ggatggaaat ccccgtggta tggggtgaaa tcttcctgct ggtggcgttt tttgtcggtc
     7921 tggcgctggg cgatgacggt aaagttcgtg cgctggtggc ggcattaggt ggcggtttct
     7981 ggacgtggtg gttctggctt ggtgtcgccg ggctggggct gattgtgcca atgttgctca
     8041 aatcgtgggt caatcgcagt tccggcattc ctgccgtgct ggcggcgtgt ggggccagtc
     8101 tggtcggcgt gttgatgctg cgctttttca ttctctacgc cggacagttg acggtggcgt
     8161 aagccagaaa agaggtggtt tctggacgta ttccttcctg aagtcggttt tctggcgttg
     8221 ttgttaagtc tcggggtcaa cgtgttgacc ccgttgacgg cctttgcggg agtgcggttg
     8281 cgctggcctg ccatgatgcg actcacttgc atcggcattc tggcgcagtg cgcgctcctg
     8341 ctgctcgcct ttggcgtact gacgtattgt tttctcatca gcgatttctc ggtcatttat
     8401 gtcgcccaac atagctacag cctgctgtcg tgggaactca aactggcggc ggtgtggggc
     8461 ggtcatgaag gttcgctgct gctttgggtg ctgctgcttt ccgcctggag cgcgctgttt
     8521 gcctggcatt atcggcagca aaccgatccg ctatttccgc tgacgctagc cgttttatct
     8581 ctcatgctcg ccgcactgct actgtttgtg gtgctgtggt ccgatccctt cgtgcggata
     8641 tttccaccag caatcgaagg ccgcgatctc aatccgatgc tgcaacatcc cggtcttatc
     8701 tttcatccac cgctgcttta ccttggctat ggcggtttga tggtagcggc gagcgtggcg
     8761 ctggcgagtc tactgcgcgg cgagtttgat gcggccagcg cccgaatttg ctggcgctgg
     8821 gcgttacctg gctggagtgc attaacggcg gggatcatcc tcggttcctg gtgggcctac
     8881 tgcgaactcg gctggggcgg ctggtggttc tgggatccgg tggaaaatgc ctctttatta
     8941 ccctggcttt ctgccactgc gctgctgcac agtttatccc tgacacgcca gcgggggatt
     9001 tttcgccact ggtcgctgtt actggcgata gttactctga tgctgtcgct gctgggcacc
     9061 ttaattgtcc gttctggcat tctggtttcg gttcatgcgt tcgcgctgga taacgtccgc
     9121 gccgtgccgt tgttcagcct gtttgcactg attagccttg cgtctctggc tctgtatggc
     9181 tggcgagcgc gggacggtgg cccggcggtg cgtttttcgg ggttatcgcg ggaaatgtta
     9241 atcctcgcta cgctgttgct gttttgcgca gtgctactga tcgtgctggt gggaacgctt
     9301 tatccgatga tttacggtct gctgggctgg ggacgcctct ccgttggcgc gccgtatttt
     9361 aaccgcgcga cgttaccgtt tggtctgttg atgctggtgg tgattgtgct ggcgacgttt
     9421 gtctctggca aacgcgtgca gcttccggcg ctggtagctc atgcgggcgt gctgttattt
     9481 gccgctggga tcgtggtttc cagcgtcagc cgtcaggaga tcagcctgaa tttacagccg
     9541 ggtcagcagg tgacgctggc aggatacacc ttccgttttg agcgcctcga tctgcaagcc
     9601 aaaggcaatt acaccagcga aaaagcgata gtggcactgt ttgaccatca gcaacgcatt
     9661 ggtgaactga tgccggagcg gcgtttttac gaagcacgtc gtcagcaaat gatggaaccg
     9721 tcaattcgct ggaacggcat ccatgactgg tatgtggtca tgggtgaaaa aaccggagcg
     9781 gatcgttacg cttttcgctt gtatgtacaa agcggtgtgc gctggatctg ggggggagga
     9841 ttgttgatga ttgcgggcgc attgttaagc ggatggcggg ggaggaagcg cgatgaataa
     9901 aggacttctc acgctactgc tgttatttac ctgttttgcg cgcgctcagg tcgtagacac
     9961 ctggcaattc gccaatccgc aacaacagca acaggcgtta aatattgcca gccagttacg
    10021 ttgtccgcag tgccagaatc aaaacttact ggaatccaac gcgccggtgg cagtcagtat
    10081 gcgccatcag gtttacagca tggtggcgga ggggaagaac gaagtcgaaa tcattggctg
    10141 gatgaccgaa cgctacggag attttgttcg ctataaccca ccgttaacgg gtcagacgct
    10201 ggtgttgtgg gcgctgccag tggtgttgtt actgctgatg gcactgatcc tctggcgagt
    10261 gagggcgaag cgatgaaaga gcccaaaata ccggtgaaaa tgctgacaac actcacgatt
    10321 ttgatggtat ttctctgtgt cggcagttat ctgttaagtc caaaatggca ggcggtacat
    10381 gcggaatatc agcgtcagcg cgatccgcta catcagtttg ccagccagca aaccccggaa
    10441 gcgcagcttc aggcattgca ggataaaatc cgcgctaatc cacaaaacag cgaacaatgg
    10501 gcgttactgg gcgagtacta tctgtggcaa aacgattaca gcaattcgct gctggcgtac
    10561 cgtcaggcgt tgcaactacg tggtgagaac gctgaactgt atgcggcgct ggcgacggtg
    10621 ctttattacc aggccagcca gcatatgacc gcccagactc gcgcaatgat cgacaaagcc
    10681 ctcgcgctgg actctaacga aatcaccgct ctgatgctgc tggcttccga tgcgtttatg
    10741 caggcgaatt acgcgcaagc catcgaacta tggcaaaaag tgatggatct caactcaccc
    10801 cggatcaacc ggacacagct ggtcgagtcg attaatatgg cgaaattgtt gcagcggaga
    10861 tcggattaat catctggtga tgaagattat gttattgagc tgcataaaaa ataatcgaat
    10921 gaacatatgc caaaaataat cactaatcag tattattgca gattaaacaa ataaaaatct
    10981 ttccataaca aatggttatt cattaatcct gacataaact cgcgttatta tgcattaatg
    11041 cagcgaaaag ctctgttgtt aaagggttgc gcaacatacc gcgcaaatga tactgatcat
    11101 aagcgttaaa aaaatctaca aaccaacgca acacaattca tgcctggcag tatgtcacgt
    11161 tctcgcgttt ctgaacgggg aacggcgctc cattgaggaa gttattctga tgaaaaatat
    11221 aaaattcagc ctggcctggc agattctgtt tgctatggtg ctgggcattc tcctgggaag
    11281 ctacctgcac taccatagcg acagccgcga ctggctggtc gtcaatttgc tctctccggc
    11341 gggtgatatc ttcatccatc tgattaaaat gattgttgtg ccgattgtga tctccacgct
    11401 ggtggtgggt atcgcgggtg tgggtgatgc caaacagctc gggcgtattg gcgcgaaaac
    11461 cattatttac ttcgaggtga tcaccaccgt cgccatcatt ttggggatca ctctggcgaa
    11521 cgtcttccag cccggtgccg gggtggatat gtcgcagctg gcgaccgtcg atatctcgaa
    11581 atatcagagc actacggaag cggtacaaag cagttcccac ggcattatgg gcacgatttt
    11641 gtcgctggtg ccgacgaaca ttgtggcgtc gatggcgaaa ggcgaaatgc tgccgatcat
    11701 cttcttctcg gtgctgtttg gtctggggct ttcctccctg cccgcgacgc atcgtgaacc
    11761 gctggtgacc gtgttccgct ccatctctga aaccatgttt aaagtgactc acatggtgat
    11821 gcgttatgca ccggtgggtg tgtttgcgct gattgcggtg acggtggcta actttggttt
    11881 ctcttctctg tggccactgg cgaaactggt gctgctggtg catttcgcca ttctgttctt
    11941 cgcgctggta gtgctgggaa ttgtggcgcg cctgtgcggg ttaagcgtct ggatcctgat
    12001 tcgtattctg aaagatgagc tgattctggc gtactccact gccagctctg aaagcgtact
    12061 gccgcgaatt attgagaaga tggaagccta cggagcaccg gcgtcgatca ccagcttcgt
    12121 ggtgccgacc ggttactctt ttaaccttga tggttcgacg ctgtatcaaa gtattgccgc
    12181 tattttcatc gctcagctgt atggcattga cctgtccatc tggcaggaaa tcattctggt
    12241 gctgacgctg atggtgacct cgaaggggat tgctggcgtg ccgggcgtgt cgtttgtggt
    12301 gttgctggca acgctgggta gcgtaggtat tccgctggaa ggtctggcgt ttattgctgg
    12361 tgttgaccgt atcctcgaca tggcgcgtac tgcgctgaac gtggtgggta atgcgctggc
    12421 ggtgctggtg attgccaagt gggaacacaa atttgaccgc aaaaaggcgc tggcttatga
    12481 gcgtgaagtg ctgggcaaat ttgataaaac tgcggatcaa taattgaaga ttgccggggt
    12541 tatccacccg gcaatgtgtg gatgcctgat gcgacgctgg tgcgtcttat caggcctacg
    12601 ccagacagcg caatagcctg atttagcgtg attttgtagg tcggataagg cgtttacgcc
    12661 gcatccgaca tcaacgcctg atgcgacgct taacgcgtct tatcaggcct accttaaccg
    12721 ttggttaatt tttcaaactc ttcacacccg gtatcaaacc cttccataca gctcaggttc
    12781 aaccagtgca gcgccttttg tttgttcttc tcgataaaac cttcttcacc gtttaagaac
    12841 atcattcccg cccagtactc ggaataaccg gttcgggaaa ttgcagagct gcgtttgaaa
    12901 tactaggttg ccttgtcatc gacggcagag tcgttctcca gatcttccga ggcttttcta
    12961 acagcgaaat cgcctttgga taatccggtt tacccgcttg agtatttacc agaatatgcg
    13021 ccagcgttac ttcaccttct ttactgcccg cttgcgccgc tttctctgca agaacttttg
    13081 cttgtggata gtccagactg cccggattgg tgattttgat ctgcgccaac agcgcgcagg
    13141 catcagcatc accgctgtcg gcggctttct gtgcccaata ttcggctttg ctcaaatcgc
    13201 cggagctaaa ccagctgtcg gcaagaaaat attgtgcgcg tcggtccccg gcctctgctg
    13261 cctttaaata ctggctgcca ggctcggagt cgttggcgtg ggcaaagaat gtcaaaaaca
    13321 acatcaatgc gataattttt ttcattttga taatacgatt gggtagggag taaccagtat
    13381 aaagagttcg aatggataaa aaaacagcct ccgaaaggag gctgtagaaa ggactgtatt
    13441 acgccagtgc cgcttcgcgc aggcgagttt tcaacttgtt gtactcgtca atcacgtact
    13501 gctcggcggc gcgctgatcg gcgatcggct cgacgcgcac ggcgcagtat ttgtattccg
    13561 gcgttttcgt aatcgggctt aagttttcgg taaccagctc gttacaggaa ccaatccacc
    13621 actggtaggt catgtaaatc gcccctttgt tcggacgatc gctgacctgc gcacgggtga
    13681 taattttgcc tttacgcgag tgcacccaaa ccaatgcctc atcttcaata cccagacgtt
    13741 tggcgtcttc ggtattgatt tgtgcgtagc caggttcatc agccagcgcc gccagtgccg
    13801 cacagttacc ggtcatcgaa cggcaagagt agtgaccaac ttcacgcacc gttgacagta
    13861 ccatcgggta ctcgtcggtg agtttgtcga ttggcgctac ccagtcgcag gtgaagaact
    13921 gcgccagacc gttcggggta tcaaacttct ctttaaacag ataagaagtc ccctgatcgg
    13981 catctgaagt atcgcggcaa ggccactgaa tgaagccctg ttcgcccatt ttctcgtaag
    14041 tcgcaccgta gaaatccggg cacagatgac gcaactcatc ccagatctcc tgggtgttgt
    14101 tgtagtgcat cggataaccc atacgggtgg cgatttcact gatgatttgc cagtccgttt
    14161 tcagatccca tttcggttca actgctttga agaaacgctg gaagccacgg tcagccgcag
    14221 taaacacgcc ttcatgctcg ccccacgacg ttgacggcaa aatgacatcc gccgccgacg
    14281 cggttttggt cataaagatg tcctgaacga tgaccagttc cagatcttca aaggctttac
    14341 gtactgccga cagctccgca tcagtttgca gcggatcttc gcccataatg tacgcggcac
    14401 gcacttcgcc atgcgctgcg cggtgcggca gctcgctgat gcgatagccg gtatgagcag
    14461 gcaggctttc cacgccccag gctttggcga atttctcgcg gttagccgga tctttcacgt
    14521 actggtatcc cggatacgta tccggcagcg cgcccatatc gcaggcaccc tgcacgttgt
    14581 tctgaccacg aaccgggttt acacccgcat gcggcttacc gaggttaccg gtcagcatcg
    14641 cgaggctggt cagagaacgc acggtttcca cgccctggta gaactgggtt acacccatgc
    14701 cccacaggat ggcggcgctt ttcgcctggg catacatccg tgccgcctga cgaatctcac
    14761 tggcgctgac gccggtgata tcttcaaccg actccggcgt gtagccttca acgattttac
    14821 gatactcttc aaagccttct gtacgggaag cgacgaacgc tttgtcgtac agattttctt
    14881 caataatgac atggcccatc gcattcaaca gcgcgatgtt cgagccgttt ttcagtgcaa
    14941 tgtgcatgtc agcaatgcgc gcggtttcaa ttttgcgcgg atcgcagacg ataattttcg
    15001 ccccgttacg tttagcgtta attacgtgat tcgccatgat tgggtgggaa tccgccgggt
    15061 tgtacccgaa aacgaacact aaatcggtat tatcaatttc gttaatagca ttgctcattg
    15121 cgccattacc gaccgattgg tgcagacctg caaccgatgg gccgtgtcag acacgagcgc
    15181 agcagtcaac gttattggta ccaataacgg cgcgcgcaaa tttttgcatt acatagttgg
    15241 tttcgttacc cgtaccacgc gaggagccgg tcgtctggat ggcatccgga ccgtacttct
    15301 ctttgatggc gctcaggcgc tcggcaacgt aattcagtgc ctcatcccag gaaacaggtt
    15361 cgagtttgcc gccacgctgg cgacggatca tgggggtttt caggcgcggg gtcaggatct
    15421 gggtatcgtt aatgaagtcc cagccataat aacccttcag acacagggta ccctggttgg
    15481 ttttcccctg cgctgcctcc gcccggacga ttttgccgtt atcgacgacc aggttgattt
    15541 tgcaacctga tgcgcaatag gggcaaaccg tgacgacttt tttcatcggt ctcgctccag
    15601 ttaatcaaat cacgcatacg cgctctcgac tacagtatgc atcttttatg ccacatttta
    15661 tttggggtca ttccctgata ttacgggcac tatttattca aaactctgac gaaaaacagg
    15721 ctgtcgtcag ttttgacgtg acgaaacgaa ataccgcgtg acagccatca cgcggcagac
    15781 attttatttt ttctcgacga cgggagccgc ctgatacccg ccgcccagcg atttcatcaa
    15841 ctgaatgctg tggatcaccc ggcggctgtc cagcatcagt aatgacatct cttcggcaag
    15901 cactggcaac cgggcttcgg tggcctgtaa gcggctggtt aagccgcgct gataggcggc
    15961 ctcggcagcg cgctgggtga agcgcgttgc ttccacgcgt tcagcctgca tttctcgttc
    16021 gtcgttgagc gtttgcagac gcgtgccgtt gacggcaacg tcacgcaccg cgttcagtac
    16081 tgactggttg taacgttcaa tcatcatgtt gctggcggcg cgagtgcctt cgagattggc
    16141 attcaaccgt ccaccgtcaa acagcggcaa tttcagaccc gggatgaagt tgaactggcg
    16201 actggttttt ttgaataagg tatccaggtg gatggagtcc agaccgaaaa acgctttgat
    16261 atcaaagctc gggtagaaca gtgcccgcgc ggaatccacc tgatctaatg acgcctgaac
    16321 ataccagcgc atggcttgca gatccgggcg tctggcgagc aactcataag agagtgtcgc
    16381 cggaatgccg gtctggactc gtggtaatgc caccggtttg atctccggca tatcgctggc
    16441 ccccgcgcca atcaatgcac gcagagattc tcgcgtttcg gtgatttgcc ctttgacggc
    16501 agcaatttgt ttatcgaccg ccagaatctg tgcccgcgcg ccgtggaaag gcacttgtgc
    16561 ttccagaccg tgcgccactt tactctggtg cgctttcacc gcgtaatcaa tcacatcgcg
    16621 agtttgttct aacagatcga gcatctgata gctggcctgc atactgtaat aaagctgcgc
    16681 tacgcccgtg gtcagcgata gctctactgc tgcggtttct gccagcgcgg cattatgcgc
    16741 gccaatggcg gcggcaaccg ctgagcgatg cacaccccac aaatcaagat ccagtccggc
    16801 aaacaaacct actgtggctt ccgtatagta cggcccgtcc atacccagtg agggcgcatc
    16861 catcgcataa gggcttaaaa agccgttcgc cgagacgcgt tggcggttga gcatccctaa
    16921 cgctgcgacc tgtaattgtg aaccggcatc taacaaatcg gcctgggact gcgctttttc
    16981 ttcccgcagt ttcgcttcgg cgagggtgtg tgaaccactt agcgtccgtt ggatcagcgc
    17041 atccagctgc gggtcattga gttgtttcca ccactgcgcc tgcggccagc cggagctggc
    17101 aagatgaata tcgtcggcca gtttgatttg ttccggtttg agctgttgat gaggtgcaga
    17161 atccttacgt accagggcac agccggaaat cagcgtcgtg ctgccgagaa tgctgcacaa
    17221 cagcagacgt gaaagttgac gattgatcat tgcgtggctc cttgtgcctg ttccgtggcg
    17281 ggcgttaatg ccggggctgt ccagtctggc aagcgggcga aaagctggca gacgtgttgc
    17341 tcctgtttta ataaggtggg caggatggcc tgcgaggcgg gtgtctcttc aagcgttatt
    17401 tgaggagaac agctgagtgc ggttgccaga ccggcagcgt atttttccag ggcgtcggca
    17461 aactgacctg ctctgtccgg ctgtagtgcg ttatccagcg cctgcgccga gttccaggtg
    17521 gcatcccagg cgtgaagaag atcgcggccc tgacgaataa ccgtttgcga acgttcaatc
    17581 agtaaggcgc gttcttcgct gtccagttga cgctccagcg ccacgcgttg gcacatctct
    17641 tcacaggcat taaacgccgc atgcagacct atacgaattt gcagataagt gcgcagagcc
    17701 gtgacttcct gctggcgtgg gatccgcatt actttactta gcatacccag cgcaccggct
    17761 agtttttgcg gcagagtgcg cgcttcactt tcaggccaga caaaggtgta aatcaccgcg
    17821 gacaccacgg taccaatgat gatacccagg gcgcgatcgc gaatttccac caggtcgtac
    17881 actgggccaa aaacgttttc gagcgtggcg agcgcgaagg tgacgaccat ctgtgtgccg
    17941 atataagaag agcgttcaga gctggtggca atccatgcgc ccaacaggaa aatcggtgcc
    18001 agcacaaaca gcaattcgac aatattgtcc agccagggca tgaccagtag cgtgaataac
    18061 agcgccagaa tcgcgccgca aaaggccccg ccaaaacgca gcaccatctt ctggtacgac
    18121 gaaccgacat ttggattagc gacgatcacg caggtcagca tacaggtgtg aatgccttcc
    18181 cagtccacgc cgctgtaaaa ggtgtaacag atcaaacagg cgagcaatgt ttttaccgcg
    18241 tagcgtatat agtctggatt ggtaaaagca tcggcgacca ttgatggcgg tttggcggcg
    18301 ggcgttggcg gcgtattcgg gttcatctgg cccagttgta acaacgtctg gcagatattc
    18361 tccaggttac attcccgtgc cgccaccgct tcactttcac tgatccgcca gtcgctttgc
    18421 cagcactgac cttcagcaac ggcatgctgc agcttgttga tttctgaggc taatttttgc
    18481 cgaaattcaa taattgcctg agaatcagca aaagaggtgg gatcgtagcg attcagcgtc
    18541 gagtaaatgt aggttaccgt tgccacgcag ctttgccacc atgcgctttg agttcgccag
    18601 ttggcatcgt ccgcgagaca aaagacattc agtttttgca gcgccagcgc ctctctttca
    18661 atccgcgttt cgggtagcgg tgcgaggctg tctgtcaggt gactaatggc atcatcaagc
    18721 cgatcattaa gcgcctgatg catttgcgaa atggcacgac tgggaaacca cagcacgccg
    18781 attaacgtca tcagcaaggt tggatagagg ccaacaacga tacaccacag cgttaagcgc
    18841 acgaccactt ccggatagtc gagcatggcg gggaaggttt gcccgtaaat ggcgacaatg
    18901 gcgacagcga aaaagaccag tcccagccga tgggtgcgca tcaaaaacat gcagcccatc
    18961 aggatcggcc cggcgatgat caatcggatc aacggttcgc cgtatgacca tttgtagatc
    19021 aaaaacaggc tgccgatctc cagcaccgtg gcaaccacaa acaagatcgc cacaaatttg
    19081 gtgtaaaacg cgttcgactg aatactgtaa aacagcactg ccagcgataa cgccacaaaa
    19141 gggatctcaa aagtcatcga gatcagaatc accagcaggc agcctaccca gagttgcacg
    19201 atctgcggca cgcggccggg tcgccgctcg cttaactctt catgaaagaa cgccagcagc
    19261 ctgaccaccg gtaatggcag ggagttgagc gcgctcatta ttgcggctca agattagcga
    19321 ctgccgaagc gccgatgcgg aacatttccg ggtcaggttt atcgaccatg attttgaccg
    19381 gaaaacgctg ggcaacgcgg acccagttaa tagagcgaga aactttcggc aggccgccca
    19441 gcaccaggcc gccgtcattc ggtagcacac cgtagccaat cgaatccact ttaccctcga
    19501 aggttttgcc gctgtcactc atcaggcgaa tcgttgcggg tgtacctgag cgaatatttt
    19561 tcagatcggt ttcgcggaag ttggcgatca cgtaccagtg acgagtgtcg attagggtaa
    19621 aaatagggcg catggcagaa gcaaattgcc cgacggaggt tttgagggaa atgacccggc
    19681 catcaaacgg cgcgcgaacg gtcgccattt ccagatgcag tttggtcagg gcaatatccg
    19741 cttcgaccgc cgcacgctgg gcaactaata catccacgcc gctgacggcg ctggcggctg
    19801 actgcgcctg taacaatacg gcattaagat ccgcttctgc ggcgcgctgc gccgttcttg
    19861 cacggtcaac atcttccgct gagacaaaac cttctttcag taatggctcg gtgcggcgta
    19921 atgtatctgt ggcctgtttc gcggcggcac gtgctttttc taccgtggca ttaaccgagt
    19981 cggcaccaaa ctgttgggcg tcaacgctac gctgggtgag cataatttgc ttatccagcg
    20041 ccgcgaggga ggcttcagct ttcgccagat tggcttcgta cgggcgcggg tcaatgcgga
    20101 acagcaaatc gccctgtttg actgcctggt tgtcggtgac cgccagttct acaatgcggc
    20161 cgctgacttc cggcaccaca tcaatggtat ctgctgacgc gtaagcgtca ttagttgatg
    20221 gcgcactgtc tacgcgccag ataacgaaaa caagggcaac cagcgccaac gcaaccacta
    20281 acagagcagg gaatttactg cgaggagctt ttttcggcgt actttccatg agcgcgtctc
    20341 aaatagatta gaaaaatgcc agccagaaca gcatggcgta gacagcaaaa agggcggtat
    20401 aaataattcc gacaaatgcc agattgatat ttgcccgctg aataattcgc ctcgtgatta
    20461 gcgtcaaaat aaggctggca atggcgcaga aaaaccagct gggataataa gcgccgatca
    20521 ccgggattgc cggagataat gagcatcccg aaaccatgaa gacgggaatt atccaggctg
    20581 tttttttgag ttgcatcgcc atgcgagaga gaactgttgg catattaaat acatcctgtt
    20641 tgctgcgaac aatatctgta gtgaatatca atatccattg aaggcgtcag tatggctatt
    20701 ttcttgatga ataaaaatag ctttattcag ccaccgcatt cataacttat atattttatg
    20761 tgttaattga ttgtatgtat ttttataata aatgcttttg ggggcttaag cgcccccaaa
    20821 agtgagtggc attaatttgg ggttacgata ttcacccaca aatcgaaatt atccagacag
    20881 gcaataattt cttccagttt cgcgccattg ccaataattt tggctttctt cgcttttacc
    20941 agatccgcca ttttggcttg tcctgtcagc acggcgtgca gatcttcacg gctgatgtag
    21001 aaagaggcgt cggcttgcgg ttgcagtgtt ttacggtagt taagcacgct atcgttcagc
    21061 gtcaggttga ggttatcgcc gttgctcata ttgaagttca ggctgatatt tttacccgca
    21121 gctttcgcgc tatcgaggcg aacggacata aagtcgaaca gcatttcgac cgacatcccg
    21181 cgaatggtgt ccggggaacc ggtggtgccg tggctgaact tatgcacccc ttcgcgcagc
    21241 tctttcgcgc cggtcaggta gaaaccgcgc caggtggcgg actcggcctg atagcccagc
    21301 tgttcaaagt tattcgcttg cagattcttc gcgacctggt cacccgggtt ggcggcaatc
    21361 acctgtttca gcagttctgc cgaccagcgg taatcacctt gcttgttcgc ttcttgcgcc
    21421 aggctgatga cacgggcaga accgcccagc gcctgcacgt aacgtttacc catctccacc
    21481 tgaccatacg gatgcaggtt agccgggtta ccgtcgtaat agccaagata gaagttatac
    21541 accgcgcggg cgttgtggct gacagaaccg taatagccac ggctggccca gttattggca
    21601 agtgcaggcg gcagtttaat catgtcgccg atttcattca tggtgtagcc ctggttcgcc
    21661 aggtgcaggg tctggtcgtg aatgtacttg atagtatcgc gatatttacc aatataatca
    21721 ttgatatgct tattgccccg gaccggccag gtgtgcggca taaacaggac ttccgcgtcg
    21781 ttaccccaca tatccagcgt ttcgttcaga tactcggtcc acttgctggt gtcgcgggtt
    21841 ttcgcgccgc gcagagtgta gaagttgtgc agggtatgcg tggcgttctc ggcggtacac
    21901 agcgctttca gggccggaat atagaagtgc atttcggctg gtgcttcgct acctggggtc
    21961 atcaggaagt caaactccag gccgtcgata atcatcttct caccggtttt ggtgatggtt
    22021 ttgttcggtg cgatgatgct cgggtagccc gatgccagcg ttacgccaag accattgccg
    22081 atgttaccct gagggttatg cgccagcagc aggccgtagg agtaaagtgc acggtggctc
    22141 ataatattac ccgccagtac gttttcgctg atggcttcgt ccataaagcc agcaggggcg
    22201 ataacctgca ctttaccgga tttcacatca gcttcagaga taatgccttt cacgccgcca
    22261 tagtggtcgg tatggctgtg ggtataaata accgcaacaa tcggtttttg cgggcgattt
    22321 tggaagtaaa ggtcaagggc ggcttttgcg ctcggtggcg tcaccagcgg gtcgatgaca
    22381 ataatcccgg tatcaccttc gataaaggtg atgttggaga tatcctgacc gcgaacctgg
    22441 tacattctgt cggtgacttt aaacaggccg gaaataccgt ttaactgcga ctgacgccac
    22501 aggctagggt taacggtttc gggcgcgggc gcattgatat caaatttata atcttccccg
    22561 cgataatatg gtttgccatt agcatcgcgc agaatacctt catccagcag cggagcgata
    22621 aatccacgct gagcgtcgtc aaaatcctga cgatcgctaa acggtaatga tttggcgtaa
    22681 ttctgattaa cctgttgggt atattgagtg gcggctttcg cttcctcttt cgcgttagcg
    22741 gtatttacca tcatgccgct ggcggcagtt aacgcaataa caattctgct caaacggaat
    22801 aaccgagagt tattcatata aatctccatt tatcatttat gtcgtaaata tgtaatccat
    22861 acaaaatacg tcatttaaag ctggggttat cataattggg aatttgcgac tttaataagt
    22921 ggaagtgtga gctgaacgat ccattttatt aggcatttgt gctgaagaga gaaaattacg
    22981 cgaatttatt atctctgtaa ataatatgag gtgttttata tatttattat atatattgta
    23041 cttcggcaaa tactgagcac aatttatcaa tgcaaccggt gtttcttttt aaaaaacgta
    23101 ccggagcaat gggcggtcat gtcgctggca ccgcaggatt ctgcgttgct gtgccagcct
    23161 tttattcatg gtcaatgagt gaggtgattg ataaagacac caggtcgtca gagcgcactg
    23221 attatccgca ttatgccagt gaagttgcac tggcttttgg ttcacgagtg gttggcctcg
    23281 aactggcaaa aatgattgtg gatgcgtggc tgggcgcaca gtacgaaggc ggtcgtcatc
    23341 aacaacgcgt ggaggcgatt acggcaatag agcagcggag aaattgagat tcatccacta
    23401 cttgcatgga tgagtaatga ttaatgtgga tagagtttct ttttgaggtt ggctaatgaa
    23461 acgctttccg ctatttcttt tattcaccct gctcacgctg tccaccgttc cggcccaggc
    23521 cgatattatc gacgacacca ttggcaatat tcagcaggcg attaacgacg cttataaccc
    23581 tgaccgtggg cgagactatg aagattcgcg cgacgacggc tggcagcgtg aagtgagcga
    23641 cgatcggcgc agacaatatg acgaccgccg ccgccagttt gaagatcgcc gcaggcagct
    23701 ggacgatcgc cagcgccagc ttgatcagga gcgtcggcag ctagaagatg aagagcggag
    23761 aatggaagat gagtatgggc gatgaggttg ggtatggagc aggcatcgcc cctcacccca
    23821 atggggagag ggagaaaacc agcgcaatat tcaatatcga gcacaatcgg tcccctcgcc
    23881 cctctgggga gagggttagg gtgagggggc cagcgcgcac attccctctc atcacgccac
    23941 cccaatctcc atcccatcaa atcccgcctc aaaccccgac ggcagtgcgt tttccatcag
    24001 ccacgcatca aactggtggc tgatatgggt cagaatcacc cgtggcgagc ggataacctg
    24061 attcagcgcc agcacggtgt ttaaatcaca gtgactacgt ggcgcatcct cgcgcggcgg
    24121 gtggctgcaa tcaatcacca ttacctgcgg ctgattattg cgtaaaaatt tcagcgtttt
    24181 ttccggcaag cctgcggtgt cagacagcca cgccacccgg ctgtgtgccg tttccagcag
    24241 ataaccgaag gtcagttttg agtggttgag cggcaggggc gtgacctgta acccctgcaa
    24301 atcaaacacc acaaacggtt ccaccgtgtg gctgaaatca agcaggcccg gatgtttaaa
    24361 cagatcgtcg cagccctgtt catccggcgg gccgtaaacc gggatcggat cgcccacgcc
    24421 ccagcgcagc gggaatagcc cctgcacgtg atccatatgg tagtgcgtca gcaaaaactg
    24481 ctggaacgat ccgggcggcc agcgatcggc gagatcgtgc agcccggcgt cgatcagggt
    24541 gattgcgtcg ttaaacttca ctacgccgct gcatggctgg cggcgatact gcggtgagcg
    24601 ccgcgctctg gcgcaggcta cgcactcgca gccccatgcc ggaacgccct gtgcgccgcc
    24661 ggtgccggtg agcgtgaggg tcaggctcat gttacagcgc cttggtgaag cggaagtggc
    24721 tctgctcgta gccttcacgc aggtaaaaac ggtgcgcgtc gtggcgcttc acgttggtgg
    24781 aaagttcggt catttcggcc ccggcctggc gggcttcttc ttctgcccac gccagtaact
    24841 tactgccgac gttcagaccg cacgcctgcg gcatcaccac cagttcctga atttcgccga
    24901 tccagttgac atgatgcaga tgaaactgca aatgcaggcc gatcatgccg acaacttcgc
    24961 catccagcag cgccagatgg tagcgcatgc tcgggtagcg catgctcggg tcgcgcaggt
    25021 tggcgttaaa gcccacgcga aacgcgtggt ggtcaaactc cgcctgtttt agctcacaaa
    25081 tcagcgcgta aaccgcgtcg gtatcgtact gcgtggccgg gcgaagctca caagcaggca
    25141 tggtgtttct ccttctgatg aatcagcgtc agcagtgtgt cgaccgactg gcgcaggctg
    25201 ccgtcattgt tgagcgtatg gcaatcctgt ggagtatagc gggcggcgcg cgccagccgg
    25261 gcgttaattt cactggtgtt ttcacggcca cggtttttca ggcgctggcg caggatctcc
    25321 ggcgaaacct gtaaacagac gggcagcagc gccgattgat agcgcgcccg tgcctgcggc
    25381 aaatgcgcgc gtgaaccgtt gacgactacg tcgaatccag cgtgcagcca gaggtcaatc
    25441 tcgatgccga cgccataata cagaccgtta gcgtgccagc ttaaggccag caggttttgc
    25501 cccgcgcggg taaaaaactc ccgctcactc agggcgatat ggttttcact tccggcgctg
    25561 gcgtcgcgcg tgatgtagcg atgcgccacc agtaactgcg tttgttcccg caggcggagt
    25621 tccgccagca ggctgtcttt cccggagccg gacggcccca ttaaccaaat cagttttccc
    25681 atcatcagaa caccctttta ccctgacgcc agacgtggtc gatatgaatg tgattgccct
    25741 ggcgatgcgc cagcaccagg tcagcgcgtt taccctcgcc aatcaccccg cgatcctgaa
    25801 gattcagcgc ctgcgccgga tttttggtca ccagcctcac cgcctgcggt agcgtaaagc
    25861 ggttgctctc gtcatcggcg acgcggaacg ccgcatccag caggctggcg gggtagtagt
    25921 cggaagagag gatatccagc agaccaagct gcgccagttc actggccgcc acattgccgg
    25981 agtgcgagcc gccacgcacg atatttggcg cacccatcag cacgttcatg ccatgcttac
    26041 gcgaggcttc cgccgcttcg aacgtggtgg taaattcggc gatcacgctg ccaagttggt
    26101 gggattcggc aacgtgggcg tgcgtggcgt catcgtggct ggcgagcgca atttgtcgcg
    26161 cgcggcacag ggcggcgatg gattcgcgat tcggctgcga ccagcgtgcg gcgagcgcca
    26221 attgctcttc ttcgtactgc tgcatctgcg catcggtgag ggagtatttg ccctgataat
    26281 attcgcgata cttctcgcgg ttagcgaact ggcgctggcc cggtgagtgg tccattagcg
    26341 acaccagcgt caccggttcg cgctgaacca gtttttcaaa cagcggcagt gtggtgtgat
    26401 gcggcagctc gcagcgcagg tgcagacggt gctcggcgcg gttgacgccg cgtttctgcg
    26461 tctcttcgat ggtgttgatc atcttctcca gattctccag ctgatcgccg ccgtcgcgca
    26521 cgtcgccaat cgccaccgcg ttcagcacgg tggtgatgcc gcttgccacc atcagcgcgt
    26581 cgtggctgct catcgccgaa tgggcgggcc agtcgacttt cgggcgcggg gtgaagaatt
    26641 tatcgaggtt gtcggtatgc agctcaatca ggccgggtag tagccagcca ccttcgccgt
    26701 ccatcgcttc tggcaggcgg ctctggcttt cggcaaaggc gcggatttcg ccatcctgca
    26761 cctccagcga accgtgcacc acctcgtttt ccagcaccag cttaacgtta ttgataatca
    26821 tgaagaggct cccattgggt gcaggcggtc ggcgacgtca ttacgtacag cttcgtcatg
    26881 gaagatgccg acgatggctg cgccacgggc tttggcttcg tgaatcagtt ccaccaccgc
    26941 ggcgctgttt ttggcgtcca gcgaggcggt aggttcgtcg agcagcagaa tggggtagtc
    27001 gacgataaag ccgcgggcga tgttgacgcg ctgctgttcg ccgccggaga aggtcgatgg
    27061 tgccaggtgc cacaggcgtt ccggcacgtt caggcgggtg agaagacgcg cggctttagc
    27121 ggcgcaggct tcacgcggaa cgccggtatc gagcagcggc tgcatcacca cttccagtgc
    27181 tgagatacgc gggatgacgc gcagaaactg gctcacccag ccgactgtgg ttttgcggat
    27241 ttccaccact ttgcgcgctg gcgcggtgac caggtctacc cactcgtcac cgtgtttgat
    27301 ctggatttga ccttcgtcgg gtagatagtt ggcgtacagc gagcgcagca gggttgattt
    27361 gccgctgccg gagtgaccgt ggagcaccac gcattcgcct gcgttgacgg tgagcgaggc
    27421 acgttgtaag acgggcaggc gtacgccgtt ttgctgatgc aggatgaagg ttttactgac
    27481 gttttgtacg ttaatcattt ttcgcctcgt ggttcgggtg tcggatgcga cgctgacgcg
    27541 tcttatccga cctacgggga gcgcatttgt aggccggata aggcgtttac gccgcatccg
    27601 gcaccggctc aattctgcaa aaccgatgac accagcagtt gtgtatacgg atggtgcggg
    27661 tcgtcgagca cgcggtcggt taacccactc tccaccactt gcccctgctt catcaccagc
    27721 aaacggtccg ccagcaggcg ggcgacgcct aaatcgtggg tgacaatcac taccgcgagg
    27781 ttcagctcca ccaccaggcc gcgcagcagg tcgagcaggc gtgcctgtac cgacacatcc
    27841 agtccgccgg tcggctcgtc cataaacacc agcttcggat gcgtcaccag gttgcgggcg
    27901 atctgcaaac gttgctgcat gccgccggaa aaggtggtcg gcaggtcgtc gatccggttg
    27961 gcgggaattt ccacctcttc cagccacttc tgcgcggtgg cacgaatatc gccgtaatga
    28021 cgtgccccgg tcgccatcag ccgctcgccg atattgccgc ctgccgacac ctggcggcgc
    28081 aggccgtcga gcggatgctg atgcactacg ccccattcgg tgcgcagcag gcgacggcgg
    28141 tcggcctcgc tcattgcgta cagcgaacgg ctctcatagt gaatctcccc ctgctgcggc
    28201 gtcaggcgcg cggagattga tttcagcagc gtggtctttc cggagccgga ctccccgaca
    28261 atgcccagca cttcccccgg ccataaatca aaagagacat cgctaaagcc tttgcccggc
    28321 gcgtaaaggt gggtcaggtt attgaccgaa agtaacggtt gattcattgg ttttttgcct
    28381 cgctctgttg gcggcaataa tcggtatcgg agcagacaaa catgcggttt ccggcgtcat
    28441 ccagcaccac ttcatcaaga tagctgtggg tcgatccgca gatggcgcat ggctcatccc
    28501 actgctgaac ggtgaacggg tgatcgtcga aatcgagact ttccacgcgg gtaaacggcg
    28561 gcaccgcata gatgcgcttc tcgcgccccg cgccgaacag ttgcagggcg ggcatcatgt
    28621 ccatttttgg gttatcgaat ttcgggatcg gcgacgggtc catcacgtag cgcccgttca
    28681 ccttcaccgg ataggcgtag gtagtggcga tatgaccgaa gcgggcgata tcttcataca
    28741 gtttcacctg catcacgccg tactcttcca gcgcgtgcat ggtgcgggtt tccgtttcgc
    28801 gcggctcgat aaagcgcagc ggttcgggga tcggcacctg gaagataatg atctgatctt
    28861 cggtcagcgg cgtttcgggg atgcgatggc gcgtctggat aagcgtcgca tcgtccgtac
    28921 gttcagtggt gtttaccccg gtcacgcgct taaagaagtt gcgaatcgac acggcgttgg
    28981 tggtgtcgtc tgcgccctgg tcaatcacct tcagcacgtc gctttcgcca atcacgctgg
    29041 cggtgagctg aatgccgccg gttccccagc cgtagggcat cggcatctcg cgcccgccaa
    29101 acggcacctg ataaccgggg atcgccaccg cttttaagat ggcgcggcgg atcatgcgtt
    29161 tggtctgctc gtcgaggtag gcaaagttgt agccgctcag attagccatg gttctgctcc
    29221 tgttgcagac gtttgagtag ctccagttcg gcctggaaat cgacgtagtg ggggagtttg
    29281 aggtgcgaga caaagcctgc ggcttcgacg ttgtcggcat gtgccagcac gaactcttca
    29341 tcctgcgccg ggcctgtcgc gtgctcgccg tactccggag cctgcaacgc acggtcaacc
    29401 agcgccatcg ctttgcgctc gctcatgccg aacaccagcc cgtagccgcg cgtgaagtgc
    29461 ggcggctcat ccggcgggtc aataaaaccg ttgaccattt cacactcggt catcagcagt
    29521 tcgccgacgt tcaccgcaaa tcccagctct tccggcataa tcgacacgtc gatgtaacca
    29581 ctgcggattt cgcccgcgaa cgggtgattg cgtccgtaac cgcgctgggt agagtaggcc
    29641 agcgccagca aatagccttc gtcgccgcgc atcaactgct gcaaacggga agaacgtgaa
    29701 caggggtaaa ctggcggagt gcgggtgatg tcatccggct gtgcgccgct atcctcttca
    29761 aacttcgcca gcccctgacg cgccagcagg ctgaaaacgt gcggcgacgg ggattgttcg
    29821 ctgtctgcgg tggtcagcgt cggcgcttcg ccgtttgcca gcagggtgaa atcgagcagg
    29881 cgatgggtgt agtcgtaggt tgggccaagc aactgaccgc cgggaatatc tttataaacc
    29941 gctgaaatac gccgttcgag acgcatctcc gtggtgtcga gcggctcgct taccgccagc
    30001 ttcgccagcg tggtgcggta ggcgcgtagc aggaaaatcg cttcgacgtt atcgccgctg
    30061 gcctgtttca gcgccagcgc cgccagttcg cggtcggcaa tgccgccttc ggtcatcacg
    30121 cgatctactg caagattaag ctgctgttca atctgggcga cgctcagttc aggcaaatcg
    30181 gtattgcccc ggcgtcggct ctcttgcagg gcgtgggcgg cgtcgatctc cttctcgccc
    30241 cctttcacgg caacgtacat cagcacacct ccacatgagt ggttcgcggg atagccagca
    30301 gccgctcgcc gcaggtcagg atcaggtcga tgccgagcgg gaacgggtgc gggcgctcgg
    30361 tgagttcgtg cagaatgcac tccggcagct gcggagcgat cattcgttct tcggcaatac
    30421 ccgcgccagt aaggcgcagc atgcgcccgc cgctcaggct gacgacctgt aaaatcagcg
    30481 tcgcgcccgc ttccggcgca acagcggtgc cgctggaaag agcgttgagc tgttcgctgg
    30541 aaatcgcctc atccgttacc gcgaaggtcg ccagttccga ctgattgacc agcggcgcgt
    30601 tggtatgaaa acgcaggctc tggctgacga tatcgttact taatggcgcg gaaagccaca
    30661 ccggcgtgtc gttatcagcc agcgtcagca gcacgctggt ggtggcgata ttcagcggct
    30721 gccagccgcg tttgagctga tgcagggcga caatcacgcc cggctcgctc atggccttta
    30781 acaggcgacg aaaactgtgc tgggcatcct gcacaggaag cataaaagcg gtttccaggg
    30841 tcatgcgttg tctccgcgaa ccatcgtaaa gaagtcgacc cggctggcgt tcacttcggc
    30901 ctggcgtgcg gcaatgcgtg ccatacggtc agcgtccagt ggggcaataa gggtttctga
    30961 taagttttga aaatggcgag attgctgcat caacgcgtca atcagcgcgc agcgttcggc
    31021 gtgctgtttg tcgcgcccca gcacccagct gtagccgagg gggccgtcag tcaggcgtac
    31081 ggcggcgcgg gtcagcgtgg cgtcgccggc aaaaaagcgt tcgccggtac cgcccattcg
    31141 cggctgaatc tgtaccaggc cggtttcggc ggtgcggatc acttcatagt tggcggtgat
    31201 gttcagcgcg ttcaggcggg ctgccagttc agccggttgg ctgtgcgcca gcatggacat
    31261 ccagtgctgg cgggtcgcga tatctgcgtg cattcagtgc tccatagtga attcaatcat
    31321 gtcggcgcgc gtcaggctga cggagtactc cgccgggctg ctttcaccgt cacggtggtt
    31381 aagggtgcgc acgcacagca gcggcgacat attcgggatt tcaagacgct ggcactcttt
    31441 ggcctgggcg cggcgggcgc tgatccgcgt ctggctgcgg cgcagcgcaa tcccggtttg
    31501 ctcgcgcaga aaatcgtgca gcgagccgct gtcgaagcgt tgcagcgtcg gccaaagggt
    31561 gaggtccgca aagtagtggt cgattaaaca gagcgcgatg ccgttgaccc ggcgcagggt
    31621 gcgcaggtgg atgacgttct ctccctcggt tatccccagc gcgtcagcga cgtgaccaga
    31681 tgccgggcgc agcaccgaca gcagtttttc gctggtggga tggctgccct gatccagcag
    31741 gttctggcta aaacgcgcct gggcgttgag cgggtaatcg aacgggcgca tcagcaccag
    31801 cacgccgacg ccctgacggc gctgtaccca gcctttttcc accagttggt cgatggcgcg
    31861 gcgcagggtg tggcgattta cctcaaagcg cgccgccagc tgctgctcgg cgggaagata
    31921 gtcgccgcag cgatagtgtt gacgaagctc ctgctcaagt tttgcggcta tctcctgata
    31981 gcgtgttggg tagctggtcg gatgtgtaga caagtgcata gatatcaatg cctcgcttat
    32041 cagataaagt gcttacgcaa ccgttgagag aggaaatcca gcaggctgac cgtgacgatg
    32101 ataagcacca tcagggcgca ggtttgttgg aactgaaaac cgcgaatcgc ttcccacagg
    32161 gtgacgccga tcccgcctgc accgaccatg ccgacgacgg tcgccgagcg gacgttggat
    32221 tcgaagcgat agagggagta ggagatcagc agcggcatta cctgtggcag cacgccgtaa
    32281 aggatctctt ccagcttgtt ggcgccggtg gcgcgaatgc cttctaccgg gccgggttcg
    32341 atcgcttcca ccgcttcgga aagcagcttg gagagcacgc cggtggtgtg gataaatagc
    32401 gccagcacgc cagcgaacgg gccgagaccg acggcgacca cgaacagcat ggcgaagacc
    32461 atttcgttaa tggcgcggca ggcatccatc aggcggcgaa cgggctggta aacccaccac
    32521 ggcaccaggt tttcggcgct catcagaccg aaggggatgg agagaaccac tgccagcgcg
    32581 gtgccccaga cggcgatttg cagcgtgacg gccatttcgg tgaggtaatc ctgccactgg
    32641 ctgaaatcgg gcgggaagaa gtcggcaacg aaggttgcca tgttgccgcc gtctttaatc
    32701 agcgtaagcg gggccatttc cgcgccctgc cacgagacga ccagcacggc gagaacaacg
    32761 gcccagctca gaagcgagaa ccagctacgc ttgggtgggg cgatggtgat ggtttgcatg
    32821 tttggctccg tttaatgttt tctccctctc cctgtgggag agggccggga tgagggcatc
    32881 agcgtgcgca tttccccctc accctaaccc tctccctcaa gggagagggg accgatcgag
    32941 cacattactg caccgcttta ctcaccgaac tcatcgcgct taacgcgttg ttcaggcggt
    33001 ccaagtcatc cagctgcgcc tgaatctcgg tggttttcgc cagcttgtcc tgctcattca
    33061 gtcctttatt gctttttacg ccctgcatct ctttaaacag tgcgagctgg cgaatcggca
    33121 ccagttgcag gtcgctggag gcgcggaacg gggcccagcc caggcgttcc agcaccgctt
    33181 tctcttccgg cgtttttccg tagttcataa agaagtcgta gatcttgtct ttggtggttt
    33241 cggagagatt cttgcgccag acgatcggat cgcctgggat cagcggcgac ttccagatca
    33301 ccttcagttc tttcagcttc tctggcgcgg aggttttcag cttgtcgagg ttttcggtgt
    33361 tgttggtggc aacatccacc tgcttgttgg cgacggccag cgcgttggtt tcatgcccag
    33421 cgttgacggt gcgcttaaag tcgctggcgg agatattgtt tttggcaaag acgtagtaac
    33481 cggggacgag gaagccagag gtggagttag gatcgccatt gccgaaggtg agatctttcc
    33541 gcttcgccag cagatcgttc aggttgttga tcggactatc tttgttgacg atcaacacgc
    33601 tccagtaacc tggcgatcca tccgccgcga ccgtctgggc gaagacctgg ccgttggcgc
    33661 gatccaccgc ttccattgcc gacaggttgc cgtaccaggc gatatccact ttattgaagc
    33721 gcattccctg gataatgcct gcgtagtctg gggcaaagaa ggcgttcacc ttcacgccca
    33781 gcttcttctc catatcctgt aagaatggcg tccattgcgg tttcaggttt tgctgtgatt
    33841 ccgttgaaat aatgccgaaa ttcagcgcct tttcctgctc ttcggcgtgt gccgggctta
    33901 acagggtgct gaggctgaac atgctggtga aggccagcga ggcaattatc ttagcgttca
    33961 ttcgttttcc tcaatgatgg ggatgtcagg cagctttcgc gttctcttcg atgcgattaa
    34021 tgctgcggta gagatggtca aaacgttcgt tatcaaactg ttggctgctg ccgtcgtaga
    34081 aaacgtgccc ctggcgcagg gcgacgatgc gttcgcagta gcgcagggcg taatccacct
    34141 gatgcagcgt gacgactacg gtgatgccgt cgttctgatt gatgtcgcgc agggtgtcca
    34201 tcacgatgcg ggcggattcc gggtccagcg aggcgatggg ttcatcggcc agaatcacct
    34261 tcgcctgctg catcagcgcg cgggcaatcg ccacacgctg ctgctgtccg ccggagaggg
    34321 tggaaacgcg ttgatgggca aaatgcacca tgccaacgcg ggtcagcgcc tgtaacgcgc
    34381 gttgtttctg ctcgcgggtg aaccagctaa aacaggtgcg ccagaacggc gtgctgccga
    34441 gcgcgccaat cagcacgttc tccagtacgc tcaggcgatt caccaggttg aattgttgga
    34501 agatgtagcc ggtatgggcg cggcttttgc ggatatcgcg cgccagacgg ccttcgcgct
    34561 ggactgtgcg gcccagcagc tcgatatggc tgccggcgga tttatcgccg gtaatcaaac
    34621 cgcttaagtg acgtaaaagt gtggatttgc cggaacccga cggcccaagc agagccacca
    34681 tttcactgtg atgaatgttc agatcaaccg catgcagcgc ttgatgctga ttgaaggttt
    34741 tggcgagctt ctcgacacgg ataatcgttt gcatgatgca gcctccctaa aaaagtggct
    34801 ccatcgtggc ggattattgt gacgatttgg ttaattaaaa gtgactaaca gatgaagagt
    34861 taacgggaat tcgatgacag tgcgggaggg cgggcctccc ggcgggttat tgcgttggtt
    34921 gttgtttgac gacattaatc atccacggta cgccaaattt atcggtgact ttgccgaagc
    34981 catgcgccca gaaagtttcc tgccaggcca tttcaatttt tccgttagcg gcaaggttat
    35041 caaaccagcg ttttccttct tcgacctgtt gcgaatcgag caccagcgta aagccggagt
    35101 agctggcttt tcctgacggt atagcatcgc tcatcatgat gtcgcttccg gcaatgcgca
    35161 cgttggcgtg ggcgatggcg gtatcgggaa attgcattcc ggaagggcag ttctcggcgc
    35221 tgtcctgcgc tgattttggc atttcgccga agctgatttt atagagcagt tccgcgccca
    35281 acgtacgttg ataataggca atcgcgtcgg aacagttacc ggcaaaagag aggtagggac
    35341 ttaacggcat gatggtgacc tcagttaaga gaagccagtt aagtgtagtt cgaaatttat
    35401 acagatgaga gggaagcctg ataaggcgcg gtcagcgtcg catcaggcag tcggcatcgt
    35461 tgccggatgt ggcgcgagcg ccttatccgg cttaccgatc acaatacaat cagttctttt
    35521 tcacaaactc agatttcagt ttcatcggac caaaaccgtc gattttgcaa tcgatgttat
    35581 ggtcgccttc aaccaggcgg atgtttttca ctttggtgcc aattttcagc atcgaagagc
    35641 tacctttcac cttcagatct ttaatgatgg taacgctgtc gccgtcagcc agcagattgc
    35701 cgttagcatc tttaacgatc agctcgtcgc tttcctgtgc aggttctgtg tcgttccatt
    35761 cgtaggcaca ttccgggcag atgtacatgc cgttatcttc gtaagtgtat tcggagttgc
    35821 attttgggca gtgtggtaat gacatgtgga tttcctcaaa agtcagcagg gcaaaagcgc
    35881 caaaaaacgg cagattgccg aaaaaggccg caattataca caaaatccct gagtttgtcg
    35941 ggggtactgc tgattttaga cgacgatcgt tttcatttga aaggaaacgc aaaaagaaaa
    36001 taatcttttt gcctctattt attatttaag ataatgttaa tgctctacct gttctttttt
    36061 tattcacatg atatttttat ctttctgacg ttttaaacgc atcagaagac gttatttatt
    36121 ctgataaaaa acaacacact aaatataaaa t
//
LOCUS       DAJVUK010000023        35067 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.023, whole genome shotgun sequence.
ACCESSION   DAJVUK010000023 DAJVUK010000000
VERSION     DAJVUK010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35067
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.023"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(73..1101)
                     /gene="malI"
                     /locus_tag="OQQ57_001085"
     CDS             complement(73..1101)
                     /gene="malI"
                     /locus_tag="OQQ57_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mal regulon transcriptional regulator MalI"
                     /protein_id="HCS1955919.1"
                     /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA
                     IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
                     GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
                     TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
                     WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
                     YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGTTLADRMMQKITHEETHSRNLII
                     PARLIAAK"
     gene            1276..2868
                     /gene="malX"
                     /locus_tag="OQQ57_001086"
     CDS             1276..2868
                     /gene="malX"
                     /locus_tag="OQQ57_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
                     /protein_id="HCS1955920.1"
                     /translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
                     HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
                     VGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM
                     LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINS
                     AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQTQLSC
                     PTTHGFSESATRFLSQGKMPAFLGGLPAAALAMYHCARPENRHKIKGLLISGLIACVV
                     GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG
                     LSTKWYMVPVVAAIWFVVYYAIFRFAITRFNLKTPGRDSEVASSIEKAVAAAPGKSGY
                     NVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQV
                     VIGPQVQSVKDEMAGLMHTVQA"
     gene            2878..4050
                     /gene="malY"
                     /locus_tag="OQQ57_001087"
     CDS             2878..4050
                     /gene="malY"
                     /locus_tag="OQQ57_001087"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HCS1955921.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCNMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID
                     DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            4153..5154
                     /gene="add"
                     /locus_tag="OQQ57_001088"
     CDS             4153..5154
                     /gene="add"
                     /locus_tag="OQQ57_001088"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HCS1955922.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
                     YMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(5189..6229)
                     /locus_tag="OQQ57_001089"
     CDS             complement(5189..6229)
                     /locus_tag="OQQ57_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1955923.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            6442..6567
                     /gene="blr"
                     /locus_tag="OQQ57_001090"
     CDS             6442..6567
                     /gene="blr"
                     /locus_tag="OQQ57_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HCS1955924.1"
                     /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK"
     gene            6840..7055
                     /gene="ydgT"
                     /locus_tag="OQQ57_001091"
     CDS             6840..7055
                     /gene="ydgT"
                     /locus_tag="OQQ57_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HCS1955925.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            7141..7581
                     /locus_tag="OQQ57_001092"
     CDS             7141..7581
                     /locus_tag="OQQ57_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HCS1955926.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVSYFKRSSRVKATFVNP"
     gene            7658..8239
                     /gene="rsxA"
                     /locus_tag="OQQ57_001093"
     CDS             7658..8239
                     /gene="rsxA"
                     /locus_tag="OQQ57_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HCS1955927.1"
                     /translation="MTDYLLLFVGTILVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFTAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            8239..8817
                     /gene="rsxB"
                     /locus_tag="OQQ57_001094"
     CDS             8239..8817
                     /gene="rsxB"
                     /locus_tag="OQQ57_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HCS1955928.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
                     PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            8810..11032
                     /gene="rsxC"
                     /locus_tag="OQQ57_001095"
     CDS             8810..11032
                     /gene="rsxC"
                     /locus_tag="OQQ57_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HCS1955929.1"
                     /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDARFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA
                     KARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAIE
                     AAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVDP
                     RKAAVEAAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED
                     "
     gene            11033..12091
                     /gene="rsxD"
                     /locus_tag="OQQ57_001096"
     CDS             11033..12091
                     /gene="rsxD"
                     /locus_tag="OQQ57_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HCS1955930.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSTLLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
                     VIFSGHTASGADMNTLHLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
                     GWQWVNLAWLAGGLWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            12095..12715
                     /gene="rsxG"
                     /locus_tag="OQQ57_001097"
     CDS             12095..12715
                     /gene="rsxG"
                     /locus_tag="OQQ57_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HCS1955931.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            12719..13414
                     /gene="rsxE"
                     /locus_tag="OQQ57_001098"
     CDS             12719..13414
                     /gene="rsxE"
                     /locus_tag="OQQ57_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxE"
                     /protein_id="HCS1955932.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAA
                     AERALPNGETGNV"
     gene            13414..14049
                     /gene="nth"
                     /locus_tag="OQQ57_001099"
     CDS             13414..14049
                     /gene="nth"
                     /locus_tag="OQQ57_001099"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HCS1955933.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            14661..16163
                     /gene="dtpA"
                     /locus_tag="OQQ57_001100"
     CDS             14661..16163
                     /gene="dtpA"
                     /locus_tag="OQQ57_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HCS1955934.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAIIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            16268..16873
                     /gene="gstA"
                     /locus_tag="OQQ57_001101"
     CDS             16268..16873
                     /gene="gstA"
                     /locus_tag="OQQ57_001101"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HCS1955935.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
                     AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
                     TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNETLKDEHWICGQRFTIADAYLFT
                     VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
     gene            complement(16917..17780)
                     /gene="pdxY"
                     /locus_tag="OQQ57_001102"
     CDS             complement(16917..17780)
                     /gene="pdxY"
                     /locus_tag="OQQ57_001102"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HCS1955936.1"
                     /translation="MMKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNH
                     TQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKA
                     ANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNN
                     VEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQ
                     PVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIA
                     KPEHYFSATKL"
     gene            complement(17839..19113)
                     /gene="tyrS"
                     /locus_tag="OQQ57_001103"
     CDS             complement(17839..19113)
                     /gene="tyrS"
                     /locus_tag="OQQ57_001103"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HCS1955937.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            complement(19242..19898)
                     /gene="pdxH"
                     /locus_tag="OQQ57_001104"
     CDS             complement(19242..19898)
                     /gene="pdxH"
                     /locus_tag="OQQ57_001104"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HCS1955938.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            complement(19957..20286)
                     /gene="mliC"
                     /locus_tag="OQQ57_001105"
     CDS             complement(19957..20286)
                     /gene="mliC"
                     /locus_tag="OQQ57_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HCS1955939.1"
                     /translation="MSMKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            complement(20384..21493)
                     /gene="anmK"
                     /locus_tag="OQQ57_001106"
     CDS             complement(20384..21493)
                     /gene="anmK"
                     /locus_tag="OQQ57_001106"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HCS1955940.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
                     ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF
                     AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP"
     gene            21767..22234
                     /gene="slyB"
                     /locus_tag="OQQ57_001107"
     CDS             21767..22234
                     /gene="slyB"
                     /locus_tag="OQQ57_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HCS1955941.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            complement(22281..22715)
                     /gene="slyA"
                     /locus_tag="OQQ57_001108"
     CDS             complement(22281..22715)
                     /gene="slyA"
                     /locus_tag="OQQ57_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HCS1955942.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
     gene            22916..23089
                     /locus_tag="OQQ57_001109"
     CDS             22916..23089
                     /locus_tag="OQQ57_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HCS1955943.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPL"
     gene            23155..24012
                     /locus_tag="OQQ57_001110"
     CDS             23155..24012
                     /locus_tag="OQQ57_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCS1955944.1"
                     /translation="MSIKTIKYFSIIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEK
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            24012..24479
                     /locus_tag="OQQ57_001111"
     CDS             24012..24479
                     /locus_tag="OQQ57_001111"
                     /inference="COORDINATES: protein motif:HMM:NF016513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1955945.1"
                     /translation="MNASSWSLRNLPWFKATLAQWRYALRNTIAMCLALTVAYYLNLD
                     EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSA
                     WLGFCTWACAHFTNNVAYAFQLAATRLPSSPFRWLILLRPASCRISLRRAFAR"
     gene            24476..25156
                     /locus_tag="OQQ57_001112"
     CDS             24476..25156
                     /locus_tag="OQQ57_001112"
                     /inference="COORDINATES: protein motif:HMM:NF016513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1955946.1"
                     /translation="MIVGILCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQ
                     PETNDAIRAAHEGGIGQILTMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISS
                     LRRMLLNWPSPPGATREILEQLLTALASSQTDAYTVARIIAPLRPTNVADYRHVAFWQ
                     RLRYFCRLYLQSSQELHRLQSGVDDHARLARTSALARHTDNAEAMWSGLRTFCTLMMI
                     GAWSIASQ"
     gene            25181..26023
                     /locus_tag="OQQ57_001113"
     CDS             25181..26023
                     /locus_tag="OQQ57_001113"
                     /inference="COORDINATES: protein motif:HMM:NF016513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1955947.1"
                     /translation="MAAISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQI
                     SDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLND
                     NLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTY
                     HHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRG
                     VMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQG
                     TQAS"
     gene            complement(26024..26545)
                     /gene="sodC"
                     /locus_tag="OQQ57_001114"
     CDS             complement(26024..26545)
                     /gene="sodC"
                     /locus_tag="OQQ57_001114"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HCS1955948.1"
                     /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALVVNNDGKATDAVITPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(26626..27522)
                     /locus_tag="OQQ57_001115"
     CDS             complement(26626..27522)
                     /locus_tag="OQQ57_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HCS1955949.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            complement(27571..27810)
                     /locus_tag="OQQ57_001116"
     CDS             complement(27571..27810)
                     /locus_tag="OQQ57_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HCS1955950.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD
                     GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF"
     gene            27913..28512
                     /gene="nemR"
                     /locus_tag="OQQ57_001117"
     CDS             27913..28512
                     /gene="nemR"
                     /locus_tag="OQQ57_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NemR"
                     /protein_id="HCS1955951.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
                     FYHYFRSKEAFGVAMLERHYTAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV"
     gene            28549..29646
                     /gene="nemA"
                     /locus_tag="OQQ57_001118"
                     /pseudo
     CDS             28549..29646
                     /gene="nemA"
                     /locus_tag="OQQ57_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
     gene            29727..30134
                     /gene="gloA"
                     /locus_tag="OQQ57_001119"
     CDS             29727..30134
                     /gene="gloA"
                     /locus_tag="OQQ57_001119"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HCS1955952.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFMEDPDGYKIELIEEKDAGRGLGN"
     gene            30237..30884
                     /gene="rnt"
                     /locus_tag="OQQ57_001120"
     CDS             30237..30884
                     /gene="rnt"
                     /locus_tag="OQQ57_001120"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HCS1955953.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMIAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            30977..>35067
                     /locus_tag="OQQ57_001121"
     CDS             30977..>35067
                     /locus_tag="OQQ57_001121"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HCS1955954.1"
                     /translation="MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARS
                     EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ
                     RNLQLPLKGIADERRRRGETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGL
                     SATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASSTGEDSHA
                     GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVD
                     AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL
                     GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC
                     MFAGRLENLTPPHNPLDVLAQQTVAAAAMEALQVDEWYSRVRRAAPWKDLPRRVFDAT
                     LDMLSGRYPSGDFSAFRPKLVWNRETGILTVRPGAQLLAVTSGGTIPDRGMYSVLLPE
                     GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPF
                     WRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTNANIQGLIDEQRNATG
                     IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGRIHALWGADASVVASD
                     DGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR
                     TPGHRTPLWQQRLRASQLLEIAQGYPDFPVILEILRECLQDVYDLPALERLMRRLNGG
                     EIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD
                     PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEV
                     ASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLR
                     DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRR
                     LRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR
                     VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVAL
                     HLQAYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSA
                     LQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPISPLVS
                     YNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTL
                     CRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRWRDLATQATQTR"
BASE COUNT         8149 a         9124 c         9009 g         8785 t
ORIGIN      
        1 gcctgtgtgc cacatttttt atcattaacc ttgaggaaag gacactacca ggtatagcag
       61 ataaagagag gattatttcg ctgcaatgag ccgggcggga ataataagat tgcgtgaatg
      121 cgtctcttca tgggtgattt tttgcatcat gcgatccgca agtgtggtac caagttcccg
      181 cgcaggcgtg ctggcccagg taacgggtat atcatcaagt gtggttggtg tcgcatcggt
      241 aaatgccgcc agcgaaactt gttgctcaaa gtaacgatcg actccgcttt ccccgctttg
      301 ccgccctgct ttcagcaaac caaaccatgc ccccatcgca atagtttcgt tatagcaaac
      361 cacagcactg atggtcgggt tatgacgtaa aagcgccgtg atagcttccg cagcttgctt
      421 ctggctggat gtgcactcca gcacccaatc gctgtgaaac ggcagaccaa attttagtag
      481 agttgcacaa tagcctccca cccgttctgc ccgggttaat gaggaacttt gccctcccag
      541 ccaggcgatc cgctgatgcc cattgcgaat gagatgctcc gtcaacaact gtgcagcctg
      601 catgttgtcc gggcgaaccg tatcaacatc atcaagataa ctggcacggg aagcgaaaat
      661 caccgggata gctttttctt ctgccatccg tcgcaggtca tcgctgcttc ctgcagcccc
      721 ggcaattacc acaccatcga ccccctgatt cagtaacagt gaaaaccgct gtgccagctg
      781 ctcgccgtct ttaccgccgt gaagcaaaaa aaccatccgt ccctgcgctt ccagagcttc
      841 cgtcaatccg gccgtcaatt cggcgtaaaa cggcgcagat aaatcacgga cgatcaaacc
      901 aatgacgccg ctttgcccgc cgcgcagcgc cgacgcctgg cgattgcgca caaatcccag
      961 ctcttcaatg gcggcgttaa cgcgttctcc tgtggcggta gagattcgcc ctttgccact
     1021 aagcaccagc gaaacggtac ttaccgacac gcccgcagcc agcgcaacat catgaatggt
     1081 tatttttttg gcggtagcca tgcagatgac ctactccctg attatgtgac agataaaacg
     1141 ttttaccttt tatttatctt atacccgcta ttatcgttgc gtaatgtgat ttatgcctca
     1201 ctaaaatttg ataaaacgtt ttatcttctc gcgcaattta ctgaatccag attgttctct
     1261 acgaggagtc gttttatgac ggcgaaaaca gcaccgaaag tcacgctgtg ggagttcttc
     1321 cagcagttag gcaaaacctt catgttaccc gtggcattat tgtcgttctg cggcattatg
     1381 ctcggcattg gtagttctct tagcagccat gatgtcataa ccctgatccc ggtcctgggc
     1441 aaccccgtgt tgcaggctat ctttacctgg atgagtaaga ttggctcgtt tgcttttagt
     1501 ttcctgcctg tcatgttctg tatcgccatc ccgctgggcc tggcacgcga aaataaaggc
     1561 gtagcggcat tcgctggctt cgtcggttat gcggtaatga acctcgcggt aaacttctgg
     1621 ttgaccaata aaggcattct gccaaccacg gatgccgcgg ttctgaaagc caataacatc
     1681 cagagcattc ttgggatcca gtcgatcgat accgggatcc tcggtgcggt gatcgccggt
     1741 attatcgtct ggatgctgca tgagcgtttc cataatatcc gcctgccgga tgcgctggca
     1801 ttcttcggcg gtacgcgctt cgtaccaatt atctcctcgc tggtgatggg ccttgtcggc
     1861 ctggtgattc cattagtctg gccgattttc gccatgggta ttagcggctt gggccatatg
     1921 ataaacagcg cgggtgattt cggaccgatg ctgtttggta ccggtgaacg tctgctgttg
     1981 ccgtttggtc tgcatcacat tctggtggca ttaattcgct ttaccgacgc aggcggcacg
     2041 caggaagtct gcggtcaaac cgtcagcggc gcactgacca tcttccagac gcaattgagt
     2101 tgcccgacca ctcacggttt ttctgaaagc gccacgcgtt tcctttcgca aggtaaaatg
     2161 cctgcgtttc tcggcggtct gccagctgca gcgttagcta tgtatcactg cgcgcgcccg
     2221 gaaaatcgcc ataaaattaa aggtctgctg atttctggcc tgatcgcctg cgtcgttggc
     2281 ggcactaccg aaccgctgga attcctgttc ctgttcgtag cgccagttct gtatgtcatc
     2341 cacgcgctgt taaccggcct cggcttcacc gtcatgtctg tgctcggcgt caccatcggt
     2401 aataccgacg gcaatatcat cgacttcgtg gtgttcggta ttttgcatgg tctgtcaacc
     2461 aagtggtaca tggtgccagt ggtggcggca atctggtttg tcgtttacta cgccatcttc
     2521 cgtttcgcta tcacccgctt caatctcaaa accccggggc gcgatagcga agttgccagc
     2581 tcaatcgaaa aagccgttgc cgctgcgccg ggtaaatcag gttacaacgt tcctgcaatc
     2641 ctcgaagcat taggcggtgc cgacaatatt gtcagcctcg ataactgcat tacccgtctg
     2701 cgtttgtctg tgaaagatat gtcgcttgtt aatgtgcagg cactgaagga caatcgggca
     2761 attggcgtag tacaacttaa tcaacataac ctgcaggttg ttatcgggcc acaagttcag
     2821 tcagtaaaag atgaaatggc cggtctgatg catactgtcc aggcataagg ataagatatg
     2881 ttcgattttt caaaggtcgt ggatcgtcat ggcacatggt gtacacagtg ggattatgtc
     2941 gctgaccgtt tcggcactgc tgacctgtta ccgttcacga tttcagacat ggattttgcc
     3001 actgccccct gcattataga ggcgctgaat cagcgcctga tgcacggcgt atttggctac
     3061 agccgctgga aaaacgatga gtttctcgct gctattgccc actggttttc cacccagcat
     3121 tacaccgcca tcgattctca gacggtggtg tatggccctt ctgtcatcta tatggtttca
     3181 gaactgattc gtcagtggtc tgaaacaggt gaaggcgtgg tgatccacac acccgcctat
     3241 gacgcatttt acaaggccat tgaaggtaac cagcgcacag taatgcccgt tgctttagag
     3301 aagcaggctg atggttggtt ttgcaatatg ggcaagttgg aagccgtgtt ggcgaaacca
     3361 gaatgtaaaa ttatgctcct gtgtagccca cagaatccta ccgggaaagt gtggacgtgc
     3421 gatgagctgg agatcatggc tgacctgtgc gagcgtcatg gtgtgcgggt tatttccgat
     3481 gaaatccata tggatatggt ttggggcgag cagccgcata ttccctggag taatgtggct
     3541 cgcggagact gggcgttgct aacgtcgggc tcgaaaagtt tcaatattcc cgccctgacc
     3601 ggtgcttacg ggattataga aaatagcagt agccgcgatg cctatttatc ggcactgaaa
     3661 ggccgtgatg ggctttcttc cccttcggta ctggcgttaa ctgcccatat cgccgcctat
     3721 cagcaaggcg cgccgtggct ggatgcctta cgcatctatc tgaaagataa cctgacgtat
     3781 atcgcagata aaatgaacgc cgcgtttcct gaactcaact ggcagatccc acaatccact
     3841 tatctggcat ggcttgattt acgtccgttg aatattgacg acaacgcgtt gcaaaaagca
     3901 cttatcgaac aagaaaaagt cgcgatcatg ccggggtata cctacggtga agaaggtcgt
     3961 ggttttgtcc gtctcaatgc cggctgccca cgttcgaaac tggaaaaagg tgtggctgga
     4021 ttaattaacg ccatccgcgc tgttcgttaa ccccaattgc gcaacgtaaa aatcgttgcg
     4081 caatcgtgga tttttaccct gctttgtttt tataatggtg cgcactttta tatccagaaa
     4141 aagagtgcga ccatgattga taccaccctg ccattaactg atatccatcg ccaccttgat
     4201 ggcaacattc gtccccagac cattcttgaa cttggccgcc agtataatat ctcgcttcct
     4261 gcacaatccc tggaaacact gattccccac gttcaggtca ttgccaacga acccgatctg
     4321 gtgagctttc tgaccaaact tgactggggc gttaaagttc tcgcctctct tgatgcctgc
     4381 cgccgcgtgg catttgaaaa cattgaagat gcagcccgta acggcctgca ctatgtcgag
     4441 ctgcgttttt caccaggcta catggcaatg gcacataagc tgcctgtagc gggtgttgtc
     4501 gaagcggtga tcgatggcgt acgtgaaggt tgccgcactt ttggtgtgca ggcgaagctt
     4561 atcggcatta tgagccgaac cttcggcgaa gccgcctgtc agcaagagct ggaggccttt
     4621 ttagcccacc gtgaccagat taccgccctt gatttagccg gtgatgaact tggtttcccg
     4681 ggaagtctgt tcctttctca cttcaacctt gcgcgtgatg cgggctggca tattaccgtc
     4741 catgcaggcg aagctgccgg gccggaaagc atctggcagg cgattcgtga actgggtgcg
     4801 gagcgtattg gacatggcgt aaaagccatt gaagatcggg cgctgatgga ttttctcgcc
     4861 gagcaacaaa ttggtattga atcctgtctg acctccaata ttcagaccag caccgtagca
     4921 gagctggctg cacatccgct gaaaacgttc cttgagcatg gcattcgtgc cggcattaac
     4981 actgacgatc ccggcgtaca gggagtggat atcattcacg aatataccgt tgccgcgcca
     5041 gctgctgggt tatcccgcga gcaaatccgc caggcacaga ttaatggtct ggaaatggct
     5101 ttcctcagcg ctgaggaaaa acgcgcactg cgagaaaaag tcgccgcgaa gtaacaaaat
     5161 ggatggtgca aattgcacca tccatttttc atgcaaggca caaagtcgcg cgatgtttgg
     5221 cggattcgat gcccagctca atcaactcca ttacctggat tgcctggctt gccggaaccg
     5281 gattttcacc atcgccattt aacgcatcac gaatagccgc atagtaagcc ggataattcc
     5341 caggtaccgt caacagcgtt tcttcgacac gttcctcacc ttccactcgg gtaagtacgc
     5401 catcacgcat atcgtagccc cagtcttcct gcggcagacg ctcgccattt ttcagacgtt
     5461 cttcctgtgg atcgaggcca tatttcacat aactgcctcg ggatccatgc acgatatacc
     5521 gtgctgactc agcggctgcc agcatggtac cgtgtaaaat gactcgccgc tgtggatagg
     5581 acaagatggc gtggaaataa tcggtcgact gcgctccggg ccgtaactgt gccaaatcta
     5641 ccgtcatgct gaccggtaaa ccaaatagcg taatggcctg atcaagaaga tgcggtgcta
     5701 aatcgtacca gataccgctg cctgggccgc cctgttcacg ccaacgatcg cgcacctgcg
     5761 gacggaagcg gtcaaaatga gactcaaagt aagcaacttc acccagcacg ccttccgcga
     5821 gcaaaccttt tagcgtcaag aaatcgctat cccaacgacg gttatggaat acagacagca
     5881 cacgccccag gctttttgcc agcgcatcca gctctcgcgc ttgtgacagt gtcacggtaa
     5941 agggtttatc aacgaccaca tgtttacccg cctcaagcgc cgctttggct aacgggaaat
     6001 gggtatcgtt gggtgtagga atgacaatca ggtctatgtt gggatcgtta aacagatgct
     6061 tcggctcaga gacaaccgta accgttggcc agtcggcttt tacttttgtt tcatcactgc
     6121 tggagattac cgccagttcc agcccgggcg tgcccgcaat caggggcgca tggaaggttt
     6181 tgctcgcata accataccca atcaacccaa cacggatgtt gtcgctcatg tcattgcctc
     6241 tcattgaagt atgattgcta tttgacacta tcctttaccc acgctcaaca gtttaatatt
     6301 aagtcaaaaa aatagcgaat tttccaacga caaaagctaa atatcgcaaa aacctcagta
     6361 aaaatcttgc tggagctatt attgctaagt aacatttacc ccctgaagtt aatggatcaa
     6421 tcaagagaga tgtgggctgt aatgaatcgt cttattgaat taacaggttg gatcgttctt
     6481 gtcgtttcag tcattcttct tggcgtggcg agtcacattg acaactatca gccacctgaa
     6541 cagagtgctt cggtacaaca caagtaagct ctgcgcttgt agagcgccat gctgcccgtc
     6601 cggttgcatg ttttcacttg tcggatatta aaccaggaat ttattatctt gttcgatgtt
     6661 gttggtgatt gtcagggata gtaaagcgcg ttactctttt cagagcagtt tttcatccct
     6721 gaatatttgc catcagcgca ttcttattat tgtaataaca caagcgttca cttttggtga
     6781 aattttatca tcactaataa tacctacccc tttggtatta attattttat ggacctttta
     6841 tgactgttca ggactactta ttaaaatttc gcaaaatcag ttcactcgaa agtctggaaa
     6901 aactctacga ccatcttaat tacaccctga cggacgatca ggaactgatc aatatgtatc
     6961 gtgctgccga tcaccgtcgc gcagagctgg tttctggcgg gcgtttgttt gacctcggcc
     7021 aggtaccgaa gtccgtctgg cactatgtcc aataaagaaa gtagcgatcg gttataaaag
     7081 ccttataata acgcccctaa aattagattt gcctgtttgc gtcgctattc tggagaacct
     7141 atgaccacca caacgccaca acgtattgga ggctggttgc ttggcccgtt ggcctggctt
     7201 ttagtcgctc tgttgagtac gacgctggcg ttgttgctgt ataccgctgc gttatcttct
     7261 ccgcaaacat ttcaaacgct cggcggacaa gcactgacga cacaaatctt atggggcgtt
     7321 tcttttatta ccgctatcgc catgtggtat tacacactgt ggttgaccat cgctttcttt
     7381 aaacgtcggc gttgtgttcc taaacactat attatctggc tgcttatttc cgtattgctg
     7441 gcagtaaaag cattcgcttt ttcacccgtg gaagatggca tagccgttcg ccagttgctg
     7501 tttactttgt tggcaaccgc attgatcgtc tcctatttca aacgctcgtc gcgggtaaaa
     7561 gcgacgtttg tgaatccgta ataaccttac agttaacctg ttgtcgcctg ctctggatta
     7621 acggataata ggcggctttt ttatttcagg ccgaaaaatg actgactacc tgttactgtt
     7681 tgtcggaact atactggtca ataactttgt gctggtcaag tttctcggtc tctgtccgtt
     7741 tatgggggtt tccaaaaaac tggaaaccgc gatgggcatg gggctggcaa caacgtttgt
     7801 gatgacgctg gcgtctattt gcgcctggct tatcgatacg tggattttga tcccacttaa
     7861 tctgatttac ctgcgcaccc tggcatttat tctggtgatt gctgtggtcg tgcagttcac
     7921 cgagatggtg gtgcgcaaaa ccagcccggt gctttaccgt ctgctgggga tttttttgcc
     7981 gcttatcacc accaactgtg cagtgctcgg cgtggcgttg ctgaatatca atctcgggca
     8041 caatttcttg cagtcggcgc tgtacggttt ttccgccgct gtcggtttct cgctggtgat
     8101 ggtgctcttc accgccatcc gcgaacgcct tgctgtggct gatgtcccgg caccttttcg
     8161 cggtaatgcc attgcgttaa ttaccgcagg tcttatgtct ctggccttta tgggctttag
     8221 tggtttggtg aagttgtaat gaatgctatc tggattgccg ttgccgccgt gagcctgctg
     8281 ggcctggcgt ttggcgccat tctgggttat gcctcccgcc gttttgcggt ggaagacgat
     8341 ccggtcgttg agaaaattga cgaaatctta ccgcagagcc agtgtggtca gtgcggttat
     8401 cccggctgtc gcccctacgc ggaagccatc agctgtaacg gtgaaaaaat caaccgttgc
     8461 gccccaggtg gcgaagctgt gatgctaaaa attgccgagt tgcttaatgt cgagccgcag
     8521 ccgctggatg gcgaagcgca agagctaacg cctgcgcgga tggtggcggt tattgatgaa
     8581 aataactgta ttggctgcac taaatgtatt caggcttgtc cggtagacgc catcgttggc
     8641 gctacccgtg ccatgcatac ggtaatgagt gatctctgta cgggctgcaa tttatgtgtt
     8701 gatccgtgcc cgacgcactg catctcgttg caaccggtcg cagaaacacc tgactcctgg
     8761 aaatgggatc tgaacaccat tcccgtgcgt atcattcccg tggaacacca tgcttaagtt
     8821 attctctgca ttcagaaaaa ataaaatctg ggatttcaac ggcggcatcc atccaccgga
     8881 gatgaaaacc cagtccaacg gtacccccct gcgccaggta ccactggcgc agcgttttgt
     8941 tattccactg aaacagcata ttggcgctga aggtgagttg tgcgttagcg tcggcgataa
     9001 agtattgcgc ggccagccgc ttacccgtgg tcgcggcaaa atgctgcctg ttcacgcgcc
     9061 cacctcgggt accgttacgg ctattgcgcc ccactctacg gctcatcctt cagctttagc
     9121 tgaattaagc gtgattattg atgccgatgg tgaagactgc tggatcccgc gcgacggctg
     9181 ggccgattat cgcactcgta gtcgcgaaga gttaatcgag cgcatacatc agtttggtgt
     9241 tgccgggctg ggcggtgcag gattcccgac aggcgttaaa ttgcagggtg gcggagataa
     9301 gattgaaacg ttgattatca acgcggctga gtgcgagccg tacattaccg ccgatgaccg
     9361 tttgatgcag gattgcgcgg ctcaggtcgt agagggtatt cgcattcttg cgcatattct
     9421 gcagccacgc gaaattctta tcggcattga agataacaaa ccgcaggcga tttccatgct
     9481 gcgcgcggtg ctggcggact ctaacgatat ttctctgcgg gtgattccaa ccaaatatcc
     9541 ttctggcggt gctaaacaat taacctacat tctgaccggg aagcaggttc cacatggcgg
     9601 gcgttcatcc gatatcggcg tattaatgca aaacgtcggc actgcttatg cagtgaaacg
     9661 tgccgttatt gatggcgagc cgattaccga gcgtgttgta accctgactg gcgaagcaat
     9721 cgctcgcccg ggcaacgtct gggcacggct ggggacgcca gtgcgtcatt tattgaatga
     9781 tgcccgattc tgcccctctg ccgatcaaat ggtgattatg ggtggcccgc taatgggctt
     9841 taccttgcca tggctggatg tcccggtcgt aaagattacc aactgtctgt tggctccctc
     9901 tgccaatgaa cttggcgaac cacaggaaga acaaagctgc atccggtgta gcgcctgtgc
     9961 tgacgcctgc cctgcggatc ttttgccgca acagttgtac tggttcagca aaggtcagca
    10021 acacgataaa gctaccacgc ataacattgc tgattgcatt gaatgtgggg cttgcgcgtg
    10081 ggtttgcccg agcaatattc ccctggtgca atatttccgt caggaaaaag ctgaaattgc
    10141 ggctattcgt caggaagaaa agcgcgccgc agaagccaaa gcgcgtttcg aagcgcgcca
    10201 ggctcgtctg gagcgcgaaa aagcggctcg ccttgaacga cataagagcg cagccgttca
    10261 acctgcagcc aaagataaag atgcgattgc tgccgctctg gcgcgggtga aagagaaaca
    10321 ggcccaggct acacagccta ttgtgattaa agcgggcgaa cgcccggata acagtgcaat
    10381 tattgcagca cgggaagccc gtaaagcgca agccagagcg aaacaggcag aactgcagca
    10441 aactaacgac gcagcaaccg ttgctgatcc acgtaaaact gccgttgaag cagctatcgc
    10501 ccgcgccaaa gcgcgcaagc tggaacagca acaggctaat gcggaaccag aagaacaggt
    10561 cgatccgcgc aaagccgccg tcgaagccgc tattgcccgt gccaaagcgc gcaagctgga
    10621 acagcaacag gctaatgcgg aaccagaaga acaggttgat ccgcgcaaag ccgccatcga
    10681 agccgctatt gcccgagcca aagcgcgcaa actggaacag caacaggcta atgcggagcc
    10741 agaagaacag gttgatccgc gcaaagctgc cgtcgaagcg gctattgcac gcgccaaagc
    10801 acgcaagctg gaacagcaac aggctaatgc ggtacctgaa gaacaggttg atccgcgcaa
    10861 agccgccgtc gaagccgcta ttgcccgtgc caaagcgcgc aagctggaac agcaacagac
    10921 taacgcagaa ccagaagaac aggttgatcc gcgcaaagcg gcagttgccg cggctattgc
    10981 ccgcgctcag gccaaaaaag ccgcccagca aaaggttgta aacgaggact aaatggtatt
    11041 cagaatagct agctcccctt atacccataa ccagcgccag acatcgcgca ttatgctgtt
    11101 ggtgttgctc gcagccgtgc caggaatcgc agcgcaactg tggttttttg gttggggtac
    11161 tctcgttcag atcctgttgg catcggttag tactctgtta gccgaagctc tcgtactcaa
    11221 actacgcaag cagtcggtag ccgcaacgtt gaaagataac tcagcattgc tgacaggctt
    11281 attgctggcg gtaagtattc cccccctcgc gccatggtgg atggtcgtgc tgggtacggt
    11341 gtttgcggtg atcatcgcta aacagttgta tggcggtctg gggcaaaacc cgtttaatcc
    11401 ggcaatgatt ggttatgtgg tcttactgat ctccttcccg gtgcagatga ccagctggtt
    11461 accgccacat gaaattgcgg tcaacatccc tggttttatc gacgccatac aggttatttt
    11521 cagcgggcat accgccagtg gtgctgatat gaacacacta cacttaggta ttgatggcat
    11581 tagtcaggcg acaccgctgg atacatttaa aacctctgtc cgtgccggtc attcggttga
    11641 acagattatg caatatccga tctacagcgg tattctggcg ggcgctggtt ggcaatgggt
    11701 aaatctcgcc tggctggctg gcggcctgtg gttgctatgg cagaaagcga ttcgctggca
    11761 tattcccctc agcttcttag taacgctggc gttatgcgca acgttgggct ggttgttctc
    11821 accagaaaca ctggcagcac cgcaaattca tctgctgtct ggtgcgacca tgctcggcgc
    11881 attctttatt ttgactgacc cggttaccgc ttctacgacc aatcgtggtc gtcttatttt
    11941 cggcgcgctt gcgggcttat tagtctggtt gatccgcagt ttcggcggct atcctgacgg
    12001 cgtggctttt gccgtcctgc tggcgaacat cacggttcct ctgatcgatt actacacgcg
    12061 tccgcgcgtc tacggccatc gcaaagggta aaccatgctg aaaactatcc gaaaacacgg
    12121 cattacgtta gcgctatttg cagcgggttc aacagggtta actgcggcca tcaaccagat
    12181 gaccaaaacg acgattgctg aacaggcaag tctgcaacaa aaggcattat ttgatcaggt
    12241 gctgccagcc gaacgctata acaatgcgct ggcacagagt tgctatctgg taactgcgcc
    12301 agagttaggt aaaggtgagc atcgggttta catcgccaaa caggatgaca aaccggtagc
    12361 cgccgttctg gaagcaaccg cgccagatgg ctattccggt gcgattcagc tgctggtggg
    12421 agccgatttt aacggcacgg tacttggcac gcgcgtgaca gagcaccacg aaacgccagg
    12481 gcttggcgat aaaatcgaac tgcgcctttc tgactggatc acccattttg cgggtaaaaa
    12541 aatcagtggt gcggatgatg cgcactgggc ggtgaagaaa gatggtggtg atttcgacca
    12601 gttcaccggc gcgacgatta ctccccgcgc ggtggttaat gcggtaaaac gcgccggatt
    12661 gtacgctcag acgttaccgg cacaactttc tcaacttcct gcctgtggag aataaagcgt
    12721 gagcgaaatt aaagacgtta ttgttcaggg gttgtggaaa aacaactctg cgctggtcca
    12781 gttgctcggc ctttgtcctc tgttggcggt cacgtccact gccactaatg ctctgggttt
    12841 aggacttgcg actacgctgg tactgacgct gaccaacctg accatttcga cgctgcgtca
    12901 ctggacgcca gccgagatcc gcattcccat ttacgtgatg atcatcgcct cggtggtcag
    12961 cgctgtacag atgctgatca acgcctacgc ctttggcctg tatcaatcat tagggatttt
    13021 tattccgctg attgtcacta actgtatcgt tgtgggccgc gctgaagcct tcgccgccaa
    13081 aaaaggtccg gcgctttcgg cactggacgg cttttcaatt ggtatgggcg caacctgcgc
    13141 catgttcgtg ctgggttcac tacgcgaaat tatcggcaat ggcacattgt ttgacggtgc
    13201 agatgcgctg ttaggtagct gggcaaaagt attacgcgtg gagattttcc acaccgactc
    13261 ccctttcctg ctggcgatgc tgccaccagg tgcatttatt ggcctgggac tgatgctggc
    13321 aggaaaatac ctgattgatg aaagaatgaa aaagcgccgt actgaagcag ctgccgaacg
    13381 tgcattgcca aacggtgaaa cagggaatgt ctgatgaaca aagcaaaacg cctggagatc
    13441 ctcactcgcc tgcgtgagaa caatcctcat cccaccaccg agcttaattt cagttcgcct
    13501 tttgaattgc tgattgccgt actgctttcc gctcaggcga ccgatgtcag tgttaataag
    13561 gcgacggcga aactctaccc ggtggcgaat acgcctgcag cgatgcttga actgggcgtt
    13621 gaaggggtta aaacctatat caaaacgatt gggctttata acagcaaagc agaaaatatc
    13681 atcaaaacct gccgtatctt actggagcag cataatggcg aggttccgga agatcgtgct
    13741 gcgcttgaag ccctgcccgg cgtaggtcgt aaaacagcca acgtcgtatt aaacactgca
    13801 ttcggctggc cgactattgc tgtcgacacg cacattttcc gcgtttgtaa tcgtactcaa
    13861 tttgcgccgg ggaaaaacgt tgaacaggta gaagaaaagc tactgaaagt ggttccggca
    13921 gagtttaaag tcgactgcca ccattggttg atcctgcacg ggcgttatac ctgcattgcc
    13981 cgcaagcccc gctgtggctc ttgtattatt gaagatcttt gtgaatacaa agagaaagtt
    14041 gacatctgaa gaaaaggggt aacaccgatt accccattga taacctttct ttatcctctt
    14101 ttaaaacatc tttttaacgt gaatgatgcc attgcttagc gttatcatca ggtaatccgt
    14161 ttgcggataa ccaaaaatgc aggttaattg tttttttaat agcgaaattt tctattcatt
    14221 cgtgatcaag atcacgatgc tgtcgcaatg taaaaacatt gcaagaatca ggttaaaatc
    14281 atttaaattt acacacgcaa caaatattga cctacaaaac attacactgg ctatttttca
    14341 gaaactggac tatctcacta gtaaaaacgc taaatagcag aacatatcgc cgttaagcca
    14401 tcacccccct ctcagtgcag tgaaaaaatc tgccgttacg ttttttgaaa aatttaacgc
    14461 tggataacat ttcccggaat ggttgaattc cccgcctcag ttatatgtaa cagattatta
    14521 caaaggactt gtctgaaagt gcaagatagt gaacattacc tgccgtttcc cctcccacta
    14581 taacaattgc gcgtatgttt tttagacata acgcgagaaa gcacccccgt taatatggga
    14641 tgtaaaataa agaggtaaaa gtgtccactg caaaccaaaa accaactgaa agcgtcagtt
    14701 tgaacgcttt caaacaaccg aaggcgttct atctcatctt ctcgattgag ttatgggaac
    14761 gttttggtta ttacggccta caaggaatta tggctgttta cctggttaaa caactgggta
    14821 tgtctgaagc ggattcaatc acccttttct cttcctttag tgccctggtt tatggtctgg
    14881 tcgctatcgg cggctggtta ggtgacaagg tactgggtac taaacgcgta attatgctcg
    14941 gcgctattgt gctggcgatt ggttatgctc tggttgcctg gtctggtcac gacgccggta
    15001 tcgtttatat gggtatggcg gctattgcgg tcggtaacgg cctgtttaaa gctaacccgt
    15061 cttctctgct ttctacatgc tatgagaaaa acgacccgcg tctggacggt gcattcacca
    15121 tgtactacat gtccgtcaac atcggctctt tcttctctat gattgctacg ccgtggctgg
    15181 ccgcgaaata cggctggagt gttgcgtttg cgttgagcgt tgtaggcctg ctgatcacta
    15241 tcgttaactt cgccttctgc caacgctggg ttaaacagta cggttcaaaa ccagacttcg
    15301 agcctatcaa ctaccgtaac ctgctactga ccattattgg tgttgtggca ctgatcgcta
    15361 tcgccacctg gctgctgcac aatcaggaag ttgcgcgtat ggcgctgggc gttgttgcct
    15421 tcggtatcgt ggttatcttc ggtaaagaag ccttcgcgat gaaaggtgct gcgcgtcgta
    15481 aaatgatcgt tgccttcatc ctgatgctcg aagccattat cttcttcgtg ctgtacagcc
    15541 agatgccaac gtcactgaac ttctttgcga ttcgtaacgt tgagcactcc attctgggtc
    15601 tggccgtaga acctgagcag tatcaggcac tgaacccgtt ctggatcatc atcggtagtc
    15661 cgattctggc cgctatctat aacaagatgg gcgataccct gccgatgcca accaagtttg
    15721 caatcggcat ggtgatgtgt tctggtgcgt tcctgattct gccgctgggt gcgaaattcg
    15781 cgtctgacgc tggtatcgtg tctgtaagct ggctggtcgc aagctatggc ctgcagagca
    15841 tcggggaact gatgatctct ggtctgggtc tggcaatggt tgcacaactc gttccgcagc
    15901 gtctgatggg cttcattatg ggtagctggt tcctgaccac tgccggtgca aacctgattg
    15961 gtggttatgt tgcgggtatg atggctgtgc cggataacgt taccgacccg ctgatgtcac
    16021 tggaagttta tggtcgcgta ttcttgcaga ttggtgtcgc tactgccatt attgcagtac
    16081 tgatgctgct gaccgcgcct aaactgcacc gtatgacgca ggatgacgct gcagacaaag
    16141 cggcgaaagc tgctgtagcg taaaatttag ggaaactctt ttacaagccg ctaacttttc
    16201 gttagcggct tttttttgtt cagcaacgca ctaccatact ttaaaccaca gacaaaagga
    16261 gttaccgatg aaattgttct acaaaccggg tgcctgctct ctcgcttccc atatcaccct
    16321 gcgtgagagc ggaaaggatt ttaccctcgt cagtgtggat ttaatgaaaa aacgtctcga
    16381 aaacggtgac gattactttg ccgttaaccc taaggggcag gtgcctgcat tgctgctgga
    16441 tgacggtact ttgctgacgg aaggcgtagc gattatgcag tatcttgccg acagcgtccc
    16501 cgaccgccag ttgctggcac cggtaaacag tatttcccgc tataaaacca tcgaatggct
    16561 gaattacatc gccaccgagc tgcataaagg tttcacacct ctgtttcgcc ctgatacacc
    16621 ggaagagtac aaaccgacag ttcgcgcgca gctggagaag aagctgcaat atgtgaacga
    16681 gacactgaag gatgagcact ggatctgcgg gcaaagattt acaattgctg atgcctatct
    16741 gtttacggtt ctgcgctggg catacgcggt gaaactgaat ctggaagggt tagagcacat
    16801 tgcagcattt atgcaacgta tggctgaacg tccggaagta caagacgcac tgtcagcgga
    16861 aggcttaaag taatagccat cggcccacag gtcgttgtgg gccgaaatga gatatttcag
    16921 agctttgttg cgctgaagta atgttctggt ttggcaatac gatcctgagc agccaccact
    16981 tgcagctcat attcctgcat tgctttggtg gtcaccatga tttcgtagac tgcagcggtc
    17041 acatgttcca gcgcctcctg cagcgttgcc ccctgaagca gtttcaccag cagtaaaccg
    17101 ctcgtcacat caccaacacc taccggctgg cgcataccaa aatccaccag cggacggctg
    17161 atatgccagg cttcatcggc ggtgaccagc agcatttcaa aacggtcacg gctgtagcca
    17221 gctcgcgcca ggtgtttaac caacacaatt tgtggccctt gcgcaatgag ttcgcgcgct
    17281 gccagaaccg cttcttcgac gttatttacc gcatgctcac agagtatttc cagctcaacc
    17341 agattcggcg caatgatatc gctggcaggc aaaccgtgcc gcacatgaaa ctctgcgaca
    17401 cccggtgcaa cgatacagcc tttttccgga tgacccatta ccggatcgca aaaatatttc
    17461 gcctgcggat tcgcggcttt cacctgacgg acgataccga ggatatgttc accctgctcc
    17521 gccgatccca gatagccact taacacggca tcacaggtgt gtaatttatc aatggcggca
    17581 atgccttgca caatttcggt taaatggctg ggcggcatca cgcagccagt ccatttgccg
    17641 tactgggtgt gattagaaaa ttgaacggtg ttcagcggcc agacgttcgc gcccaggcgg
    17701 cgcataggaa actctgccgc actgttaccc gcatgaccat aaacaacgtg agactggata
    17761 gcgagaatat ttttcatcat gttccctgta taaaaaccag ggggagtgat ttctcactcc
    17821 ccctttccac ttaatgcatt atttccagca aatcagacag taattctttt tgccgcgacg
    17881 cagtaaggta aaacgaccaa acagacgatc ttcttcttta aagaagtatt caggatcgga
    17941 ctgtttttca ccgttaatgg tgatggcatt ggaggcgata gttttacgcg cctgaccacg
    18001 ggaaggttgc agttcagaat cgaccagcgc ctgcatcagg tctgcgccct tttccatctc
    18061 aaccatcggt acgccgtcct gcgccagctg ttcgaagtcc gcttcactca gcgcactcaa
    18121 agaaccgctg aacaggcatt cggtaatacg ttttgccgcc tgtaaacctt cttcaccgtg
    18181 aaccagacga gtcacctgct ccgccagtac atactgggcg cgcggtgctt taccgctgtt
    18241 tttatcttct tcttccaggg cgttgatctc ttcaatgctc ataaaggtga agaacttcag
    18301 gaagcggtaa acgtcggcat ccgcagtgtt gatccagaac tggtagaatt tgtacgggct
    18361 ggttttcttc ggatccaacc agactgcgcc gccttcagtt ttaccaaatt tggtgccatc
    18421 tgctttagtg atcagcggaa cggtcaggcc aaacacctga ttctgatgca gacgacgggt
    18481 caggtcgata ccagaagtga tgttacccca ctggtcagaa ccaccaattt gcagcaccac
    18541 accgtactgt ttgttcagac aggcgaagtc ataaccctgc aacaggttgt aggaaaactc
    18601 agtgaacgaa atcccctgat cttcacggtt gagacgctgc ttaaccgctt ctttgttgat
    18661 catctggtta acggagaagt gtttgccaat atcgcgcagg aaggtcagca cattcatatt
    18721 gccgaaccag tcatagttgt tcgccgcgat agcagagttt tctccacagt cgaaatcgag
    18781 gaacggggca acctgcttac ggattttgtc cacccactcc tgaacagttt cttcggtgtt
    18841 cagcttacgc tcggcagctt tgaagctcgg gtcgccaatc agacccgtcg cgccgcctac
    18901 cagcgcaacc ggcttgtggc ccgcctgttg gaagcgtttc aggcataaca atggaacaag
    18961 atgccccaaa tgcaagctgt cagcggtagg atcgaagccg caatagagcg cgatcgggcc
    19021 ttgcgccagt cgctctgcta acgcttcctc gtccgtcacc tgggctacca gcccccgctc
    19081 ttgcaattgt ttaatcaagt tactgcttgc catcaaaatc tccatgtata taacgactgc
    19141 acctttgccg gtacacgact tttcgccaga tgcgaaagag acatagaata aagtgccaga
    19201 atcaggagta ccagcgatta aagcaagatt tttgcatctt ttcagggtgc aagacgatca
    19261 atcttccacg catcattttc tcgctggtac aaaaagcggt catgcaggcg atgctcaccg
    19321 ccctgccaga actcaatctg ttcaaggctg acgcgaaaac cgccccaaaa gctcggcaat
    19381 ggcacttcgc cctgttgaaa cttctgcttc agctccagga atttactttc aaggataccg
    19441 cgggcagaaa tgcgactgga ctgcttcgaa acccatgcac caatctggct atcacgcggg
    19501 cggctatgaa aatatttcat cacttcgaga gtcgaaagtc gttctgcttt accgatcacc
    19561 atcacctggc gttcaagggt atgccacggg aacagcaggc taacgcgcgg attattttca
    19621 atttgatgtg ctttacggct accgaggttg gtgtaaaaca ccatgccttt ttcgtcgtaa
    19681 tgtttgagta aaacgatgcg ttgataaggc tgagcatgtt catccacggt agcgaccacc
    19741 atcgcggtag ggtctgccag tttggcttca cacgcctgag agagccaacg ttcaaaaagg
    19801 gttaatggat cggcgggaag atcgcgacgg cgtaacccgc ctttggtgta ttcacggcgc
    19861 agatgcgcga tttgctgcaa ttcgtcgtta tcagacatgg ttttctttac ggattgtcag
    19921 tgggtgacgc tattgtgcgc cgcccctgga aaaatctcaa cgctgtggat tttgtaactg
    19981 acagttattc aatacgatgc ggtcgcgttt atagacagtc gcttcatcgc ctttcgacca
    20041 gaaaacatag attccgtcag tgtaacgtgc accagacgct gaaatgccct gtttgagatg
    20101 cagtagttga ttatcgtaaa caaaactgac ttcctggcgc ggattattca gtttgaccgt
    20161 caacggtttt tcatcacact ggtattccag cgtagcggtt tgcatgtgct caaccagttg
    20221 attgaacgcg ctacagccgg tgagaagcac cggcaaacag atcagtaaca gttttttcat
    20281 agacatttcc cgaagacttt cctggtctgg agggcaatac gccctcccta acgttccaag
    20341 tgtaacggca gacgcggtaa gaaaaattca gttaactctg atatcacggg ttagcaggga
    20401 aaatagcccc cagtaccgtc tcctggcttg cgccagtgac ggaaggcaga tttcctggta
    20461 atcccgccag cgtccgccag gcaagccagg cgaaagccaa tgcttccatg tcatcgccac
    20521 taatgccaac ggcatcggtg gtggtgactt ctgtgcctgg cagtaatgcc gccagacgcg
    20581 ccatgagtag cggattacga ctacctccac cacataccat caatcgttcg cagccaccgc
    20641 tcaacaaaac ttgttcagaa atggtcacgg cggtgagttc tgccagtgtg gcctgaacat
    20701 cacggggatc aacacccgga aaatggcgta aatggcgctc cagccagccg tagttaaagt
    20761 attcgcgtcc ggtgcttttc ggtgcaggtt gcgagaaata tgggtcgctg agcatatttt
    20821 gcagcagtgg gagaataact ttacccgccc gtgcccactc ggcatcttta tcgtaaggtt
    20881 taccggcctg acgccagatc caggcatcca tcagcatgtt accaggaccg gtatcgtagc
    20941 cgccaaccgg ctgcccagga atgagcagtg acagattggc gatgccgcca atattgagca
    21001 ccattcgtcg ctcggttggg tgagccagca aggcatgatg gaacgcaggt accagcggtg
    21061 cgccttgtcc tcccaaggca atatcgcgac ggcgaaaatc accgacaacc gtaattccgg
    21121 tgcgtgccac aatttgattg ttatcgccaa tctgtaaagt gtgtggtgcc acgcccgtcg
    21181 gttcatgcca gacggtttga ccgtgacagc cgatcgcaac tatatctctc gcctgcaggt
    21241 tttgttcctt aagcaaggca ttgaccgcat cagcaaaaag tcgcccgagt tgagtatcaa
    21301 gctgtccaaa ctgcgaaagt gtaagctgct ggccctggca aatatccagt acagcctgtt
    21361 tcagagacac cgggatcggc cagctcaagc ttgccagctg tgcgacccgg tgttcatcta
    21421 ttgtcgccaa cacaacatca acaccatcaa ggctggtgcc tgacataacg ccaataaagc
    21481 ggcccgattt catagttcat cctttttcaa tctgacgttt gcgccccact caaacataaa
    21541 cttttcgtga ataccatgcg gaatgaccga tttttaccgt tggtagtaaa acattatctt
    21601 caaatcaata atcatcatga atgttttgtt tataattggt tgatcctact ttcattatga
    21661 tttgctcata tttggtagaa catgtaacca tggattcaca tatgccatat actttgacca
    21721 tgagggatgc ttgcgtggcg tttcatggtg aacaggagat ttttcaatga ttaaacgcgt
    21781 attggttgtt tcaatggtag gtctgtctct tgtcggttgt gttaataacg acaccctgtc
    21841 aggggatgtt tataccgctt ctgaagcgaa acaagtacag aatgtcagct atggcaccat
    21901 cgttaacgta cgtccggtac agattcaggg cggtgatgat tccaacgtta tcggtgcaat
    21961 tggcggtgct gttcttggtg gtttcctggg gaatactgtt ggtggcggaa ccgggcgttc
    22021 tctggctact gcagcaggcg ctgttgcagg tggcgtagct ggtcagggcg tacagagtgc
    22081 aatgaacaaa acgcagggtg tcgagctgga aattcgtaaa gacgatggta ataccatcat
    22141 ggtggtacag aaacaaggca acactcgttt ctctccgggc caacgtgtcg tactggccag
    22201 caatggcagt caggtgaccg tttctccgcg ctaaataagt ttgcgtgtgg tcaggttact
    22261 gaccacacgc ccccttcatt tcaccctttg gcctgtaact caatgatatt atgctcaagt
    22321 tttgcgatga gcgtaatcag ttgctccagt tcctctgcgg agatgccatg taatatttcc
    22381 gcgcgggttt tgttaataac agcttccatt tcgctgatca gtggctctgc cttttccgtc
    22441 agtttaatac gtttagcccg acgatcgctg gcacaagttt gacgcgaaat taaccctttt
    22501 tcttccagtt ggtccagagt acggaccagt gatggctgct cgatgccaat cgcttttgcc
    22561 agttgaattt gcgactggtc tggaggtaac tgatggatat tgtgtaacgt aacccaatgg
    22621 gtttgtgtta actccagcgg tttcaggcga tggtctatca gagcacgcca tatgcgcacc
    22681 aaccgtgcca gatcagaacc tagtggcgat tccaatttca tctccttata attagcttgc
    22741 taagatatta tgcggctttt agaatagtgt gcagcaattt tattgctaaa acaaatgtat
    22801 tgctgcattt ggttaccgtc agacatattt ttcagaaatt gcgcgtaaat ttttcgcact
    22861 taaagaatat ttattaatct aacgcaatat attcggtcgt aaaggaatct actttgtgaa
    22921 gtttatgctc aatgcaacag gattgccctt acaagatctg gtgttcggtg cgtccgtcta
    22981 ttttcctccg tttttcaaag ccttcgcgtt tggattcgtc atctggcttg tcgtacaccg
    23041 cctgcttcgt ggctggatct acgccggtga catctggcat cccttgtaaa tggatttatc
    23101 gctgtttgcg atttgcgttt gccttgctct ggcaatactg attgcgtggt aactatgtca
    23161 attaaaacaa ttaagtattt ctcaataatt attgtagcga tagttgcggt tcttgccgga
    23221 tggtggctgt ggaattatta catgcaatct ccgtggacac gcgacgggaa aatacgcgca
    23281 gaaaaggttt ctatcacccc acaggtgtcg ggacgtattg ttgagctgaa tataaaagac
    23341 aaccaactgg ttaacgcggg ggatcttctg ctcacgatcg ataaaacgcc ctttcagatc
    23401 gccgagctga acgcacaggc tcagctggcg aaagcgcaat ctgacctcgc aaaagccaat
    23461 aacgaagcga atcgtcgtcg tcatctctca caaaatttta tttctgccga agaactcgat
    23521 accgctaacc tcaatgttaa agcgatgcag gccagtgtta atgccgcaca ggccacgctg
    23581 aaacagacac aatggcaact ggcgcaaacg gaaattcgcg ccccggtgag tggttgggtg
    23641 actaacctca ctacccgcat cggcgattac gctgacaccg ggaaaccgct gtttgccctt
    23701 gtcgacagcc actcgtttta cgtcattggt tattttgaag aaaccaagtt gcgccatatc
    23761 cgcgaaggtg caccagcaca aattaccctc tatagtgata acaaaacgtt acggggtcac
    23821 gtttccagta tcggtcgggc gatttatgat caaagcgttg aaagtgactc aagccttatt
    23881 ccggatgtga aacctaacgt cccctgggtt cgtctcgccc aacgcgttcc cgtccgcttt
    23941 gcgctggata aagttccagg cgatgtcacg ctggtgtcgg gcaccacctg tagcattgcc
    24001 gtaggtcaat aatgaacgca tcgtcatggt ccttgcgcaa tttgccctgg ttcaaggcca
    24061 cgctggcgca atggcgttat gcgttacgca ataccattgc catgtgtctg gcgctgacgg
    24121 ttgcctatta tttgaatctg gatgaaccct attgggcgat gacctcggct gcagtggtta
    24181 gctttcccac cgttggcggt gtcatcagca aaagcctcgg acgcatcgct ggcagtttac
    24241 tgggagccat tgcggcactg cttcttgccg ggcatacgct caatgagccg tggttttttc
    24301 tattgagcat gtcggcgtgg cttggctttt gtacctgggc ctgtgcgcac ttcacgaata
    24361 acgtcgcgta tgcatttcaa ctggcggcta cacggctgcc atcatcgcct ttccgatggt
    24421 taatattact gaggccagcc agctgtagga tatcgctcag gcgcgcgttt gcgaggtgat
    24481 agtcggtatt ttgtgcggcg gcatgatgat gatgatcctg cctagcagtt ccgatgctac
    24541 agccctttta accgcattga aaaacatgca cgcccgatta ctggaacatg ccagtttact
    24601 ctggcagcct gaaacaaacg atgccattcg tgcagcacat gaggggggga ttgggcagat
    24661 actgaccatg aatttgctgc gtatccaggc tttctggagc cactatcgtt ttcgccagca
    24721 aaacgcgcgc cttaatgcgc tactccacca gcaattacgt atgaccagtg tcatctccag
    24781 cctgcgacgt atgttgctca actggccctc accgccaggt gccacgcgag aaattctcga
    24841 acaattgctg acggcgctcg ccagttcgca aacagatgct tacaccgtcg cacgtattat
    24901 cgccccgcta cgcccgacca acgtcgccga ctaccggcac gtcgccttct ggcagcgact
    24961 acgttatttt tgccgccttt atctgcaaag tagtcaggaa ttacatcgtc tgcaaagcgg
    25021 tgtagatgat catgccagac tcgcacggac atccgctctg gctcgtcata ccgacaacgc
    25081 cgaagctatg tggagcgggc tgcgtacatt ttgtacgttg atgatgattg gcgcatggag
    25141 tattgcatcg caataggatg ccggtgccaa tgcattaacg ctggcagcaa ttagctgcgt
    25201 actctactcc gccgtcgcag caccgtttaa gtcgttgtca ctgctgatgc gcacgctggt
    25261 gttactttcg ctattcagct ttgtggtcaa atttggcctg atggtccaga ttagcgatct
    25321 gtggcaattt ttactgtttc tctttccact gctggcgaca atgcagcttc ttaaattgca
    25381 gatgcccaaa tttgccgcac tgtgggggca actgattgtt tttatgggtt cgtttatcgc
    25441 tgtcactaat cccccggtgt atgattttgc tgactttctt aacgataatc tggcaaaaat
    25501 cgttggcgtt gcgctggctt ggctagcgtt cgccattctg cgtccaggat cggatgctcg
    25561 taaaagccgc cgccatattc gcgcgctgcg ccgggatttt gtcgatcagc taagccgcca
    25621 tccaacactg agtgaaagcg aatttgaatc gctcacttat catcacgtca gtcagttgag
    25681 taacagccag gatgcgctgg ctcgccgttg gttattacgc tggggtgtag tgctgctgaa
    25741 ctgttctcat gttgtctggc aattgcgcga ctgggaatcg cgttccgatc cgttatcgcg
    25801 agtacgggat aactgtattt cactgttgcg gggagtgatg agtgagcgtg gcgttcagca
    25861 aaaatcactg gcggccacac ttgaagaatt acagcggatt tgcgacagcc ttgcccgtca
    25921 tcatcaacct gccgcccgtg agctggcggc aattgtctgg cggctgtact gctcgctttc
    25981 gcaacttgag caagcaccac cgcaaggtac gcaggcctct taattactta attacaccac
    26041 aggcatagcg ttcaccgcca ccgcccagcg gtttaggttg atcggacata ttatcgccgc
    26101 caacgtggac catcagcgct ttgtctttga tttcatccag tgatttcaga cgaggcgtga
    26161 tgacggcatc ggtagctttg ccgtcattat tgacgaccag tgcaggcaga tcgcctaaat
    26221 gcccggcacc ttctggccct tcatgtttac cggtattttg tggatcaaga tgcccgcctg
    26281 cggattccgc ggcgctggct ttgccatctt tggtggctgg ctggcagctt cctttggcat
    26341 gaatatggaa gccatgttca ccggggggta atgctttcag atcgggcgaa aactccagac
    26401 ctttatcggt ttcagtaatg gtgacgctac caattgactg ccctacccct tgcgacgtga
    26461 cgaggttcat ctcgactttt tcactggcag cttgtgcgcc ggttgcaaca accagcgcca
    26521 gaatagccag actaaaacgt ttcataggac ctccgttcat tgtgcattcc tgaataagtg
    26581 taaaccagtg acacattttt gaacggcggc tattcctaaa agtgcttacg gtacgtcgta
    26641 ccccagtgcc gctttacgaa tacgaaacca ttgttgacgg gtcattttca gtgtttctgc
    26701 ttcgacagct gcccgtacgc gctcaatttt acctgaaccg ataattggca gcggctgcga
    26761 tggtaaacgt aatacccagg cgtaaaccac ctgttcaatc gagcccgcgt ttaactcctc
    26821 tgccaccaca gccagttcat cacgcagcgg ctggaaataa tcatcattaa acagacgacc
    26881 accaccaagg caggaccacg ccatcggacg aacacgcagt tgttgtagtt ggtcgagcgt
    26941 gccatccagc agtaacggct gatgcaccgg ggatatttcc acctgattag tggcaagggt
    27001 aaacggcaga cgtgattgca acagggcaaa ttgcgcaggc gtaaagttcg atacgccaaa
    27061 atgacgcact ttgccgctct gatgcagatg tttgaacgcg tccgccactt catcggcatc
    27121 cattaacggg tctggtcggt ggattaacag cagatccaga tgatcggtcg cgagattaat
    27181 tagcgactgt tcggcgctct taatgatgtg atcgcggtca gtgatgtaat gaccaatgac
    27241 gttttcttca cgcgcggtcg tcgcgatacc gcatttactg acgatttcca tccgttcacg
    27301 caggtgaggt gccagtttca gtgcctcgcc aaacgccgct tcgcactgat agccaccata
    27361 aatatcagca tggtccacgg tggtcacgcc gagatccaga tgctcttcaa taaaactgac
    27421 cagctggcgg gcggacatat tccagtccat caatcgccag tagcccatca caaaacggga
    27481 aaactccggg ccttgcggcg caatagtaat acgctgaacc ataatcgctt cctcttatca
    27541 gatatgagag gagtatacgc aagattaggt tcaaaagagt gatggttgct ccggttcgtc
    27601 tgatgacgct ggcttatttg cgcgtaattt gcgcattaat cgctgccgac aaaggcgcag
    27661 cacctcttgt ttttcgccat cgctcatttt attccagtta aaacgctcat cccgactacg
    27721 aaaacagccg cgacaaaacc cgcgttcgtc agactggcaa attccccggc acgggctctg
    27781 gacgggaaag aactctaatt gctccgccac ttcgccctcc tcagataaga ttattaccat
    27841 tattgaagct gttaatgtcc aaagtagcaa ctttgcttgc actagaccga ctggtctact
    27901 acactccaac gcatgaacaa acacaccgaa catgatactc gcgaacatct cctggcgacg
    27961 ggcgagcaac tttgcctgca acgtggattc accgggatgg ggctaagcga attactaaaa
    28021 accgctgaag tgccgaaagg gtccttctat cactactttc gctctaaaga agcgtttggc
    28081 gttgccatgc ttgagcgtca ttacaccgca tatcaccagc gactgactga gttgctgcaa
    28141 tccggcgaag gtaactaccg cgaccgcata ctggcttatt accagcaaac actgaaccag
    28201 ttttgccaac atggaaccat cagtggttgc ctgacagtaa aactctctgc cgaagtgtgc
    28261 gatctgtcag aagatatgcg cagcgcgatg gataaaggtg ctcgcggcgt gatcgccctg
    28321 ctctctcagg cgctggaaaa tggccgtgag aaccattgtt taaccttttg tggcgaaccg
    28381 ctacaacagg cacaagtgct ttacgcacta tggctgggtg cgaatctgca ggccaaaatt
    28441 tcgcgcagtt tcgagccact ggaaaacgcg ctggcccatg taaaaaacat tattgcgacg
    28501 cctgccgttt agcaggcatt ttttatcacc agacgaccgg gagcctttat gtcatctgaa
    28561 aaactgtatt ccccactgaa agtgggcgcg atcacggcgg caaaccgtat ttttatggca
    28621 ccgctgacgc gtctgcgcag tattgaaccg ggtgacattc ctaccccgtt gatggcggaa
    28681 tactatcgcc aacgtgccag tgccggtttg attattagtg aagccacgca aatttctgcc
    28741 caggtaaaag gatatgcagg tgcgcctggc atccatagtc cggagcaaat tgccgcatgg
    28801 aaaaaaatca ccgctggcgt tcatgctgaa aatggtcata tggccgtgta gctgtggcac
    28861 accggacgca tttctcacgc cagcctgcaa cctggcggtc aggcaccggt agcgccttca
    28921 gcacttagcg cgggaacacg tacttctctg cgcgatgaaa atggtcaggc gatccgtgtt
    28981 gaaacatcca tgccgcgtgc gcttgaacta gaagagattc caggtatcgt caatgatttc
    29041 cgtcaggcca ttgctaacgc gcgtgaagcc ggttttgatc tggtagagct cctctctgct
    29101 cacggttatt tgctgcatca gttcctttct ccttcttcaa accatcgtac cgatcagtac
    29161 ggcggcagcg tggaaaatcg cgcacgtctg gtactggaag tggtcgatgc cgggattgaa
    29221 gaatggggtg ccgatcgcat tggcattcgc atttcgccaa tcggtacttt ccagaacacg
    29281 gataacggcc cgaatgaaga agccgatgca ctgtatctga ttgaacaact gggtaaacgc
    29341 ggcattgctt atctgcatat gtcagaacca gattgggcgg ggggtgaacc gtatactgat
    29401 gcgttccgcg aaaaagtacg cgcccgtttc cacggtccga ttatcggcgc aggtgcatac
    29461 acagtagaaa aagctgaaac gctgatcggc aaagggttaa ttgatgcggt ggcatttggt
    29521 cgtgactgga ttgcgaaccc ggatctggtc gcccgcttgc agcgcaaagc tgagcttaac
    29581 ccacagcgtg ccgaaagttt ctacggtggc ggcgcggaag gctataccga ttacccgacg
    29641 ttgtaatcca acattgcgag cggcgtaaag ccgccgctat actaaaacaa cattttgaat
    29701 ctgttagcca ttttgaggat aaaaagatgc gtcttcttca taccatgctg cgcgttggcg
    29761 atttgcaacg ctccatcgat ttttatacca aagtgctggg catgaaactg ctgcgtacca
    29821 gcgaaaaccc ggaatacaaa tactcactgg cgtttgttgg ctacggcccg gaaaccgaag
    29881 aagcggtgat tgaactgacc tacaactggg gcgtggataa atacgaactc ggcactgctt
    29941 atggtcacat cgcgcttagc gtagataacg ccgctgaagc gtgcgaaaaa atccgtcaaa
    30001 acgggggtaa cgtgacccgt gaagcgggtc cggtaaaagg cggtactacg gttatcgcgt
    30061 ttatggaaga tccggacggt tacaaaattg agttaatcga agagaaagac gccggtcgcg
    30121 gtctgggcaa ctaatctcct gccgggcgtg aactcatcgc gcccgcatct ttactgcatc
    30181 gacaagtaat atttgtcata atgcgcgctg caatttatcc gtattaagag aatcagatgt
    30241 ccgataacgc tcaacttacc ggtctgtgcg accgttttcg tggtttttat cctgttgtga
    30301 tcgatgttga aacagccgga tttaacgcca aaaccgatgc gctgcttgag attgccgcca
    30361 tcaccctgaa aatggatgaa caaggctggc tgatgccgga caccacatta catttccacg
    30421 tcgaaccatt tgtcggcgca aatttgcaac cagaagccct cgccttcaac ggcattgacc
    30481 cgaacgatcc cgatcgtggc gcggtcagcg aatacgaggc gctgcacgaa atttttaaag
    30541 ttgtacgtaa aggtattaaa gcgagcggct gtaaccgcgc cattatggtg gcgcacaatg
    30601 ccaattttga tcacagcttt atgatagccg ccgcagaacg cgcctcactg aaacgtaacc
    30661 cgttccaccc tttcgccact tttgacactg ctgcactggc cgggctggca ctcggacaaa
    30721 ccgtattgtc aaaggcttgc cagaccgctg gcatggactt cgacagcacc caggcgcact
    30781 ccgcgctgta cgacaccgaa cgcactgctg tgctgttttg tgaaatcgtc aaccgctgga
    30841 aacgtctggg aggctggccg ctacctgccg ccgaagaggt gtaatcgagt cgatgcctga
    30901 tgacatgcaa tgattcaggc atctatagtg aggctattcc acgcatcctg catgatattc
    30961 acggggaata gcgttaatgg cagataatcc agacccttca tcgctcctgc cggacgtgtt
    31021 ttcaccggcg acccgcgact ggtttcttcg cgcctttaaa cagccgaccg ctgtccagtc
    31081 gcaaacctgg catgtggcgg cgcgaagcga acatgcgctg gtgattgcac cgaccggctc
    31141 cgggaaaacg ctggcagcat ttctctacgc cctcgatcgg ctcttccgcg aaggcggcga
    31201 agatacccgc gaggcgcata agcgtaaaac ctcacgcatc ctctatattt caccgataaa
    31261 agctctgggc accgacgttc agcgcaactt gcagctcccg ttgaagggta ttgccgatga
    31321 acggcggcgg cgcggcgaaa cggtaattat tgatgaagtc cacgcggtag cgggcagtaa
    31381 acgtggtgcg catctggcgt taagtctgga gcggctcgat gcgctgctcc acacctcagc
    31441 acagcgaatt ggcctttctg ccactgtgcg ctcagccagc gatgtggcag cctttcttgg
    31501 tggcgatcgc ccggttactg tagtcaaccc gcccgcaatg cgccatccgc agatacgaat
    31561 tgtcgtaccg gtcgccaata tggatgatgt ctcatcggtc gccagcagca ccggcgaaga
    31621 cagccatgcc ggccgggaag gctccatctg gccatatatt gaaacgggta tccttgatga
    31681 agtgttgcgc catcgctcga ccattgtctt tactaattca cgtgggctgg cggaaaaact
    31741 gacggcacga ttaaatgagc tttacgccgc acgcttacag cgttccccgt ctatcgccgt
    31801 tgatgcggcc catttcgagt cgacctccgg cgcaacctct aaccgtgtac aaagtagcga
    31861 cgtttttatt gcccgctcac accacggctc cgtctctaaa gaacaacgag caatcaccga
    31921 gcaggcgctg aaatcgggtg agttacgctg cgtggtcgca acctccagtc tcgaactggg
    31981 gattgatatg ggcgcagtgg atctggtgat tcaggtggca acgccgcttt ctgttgccag
    32041 tgggttacaa cgcattggtc gcgccggaca tcaggttggc ggtgtatcta aagggctgtt
    32101 tttccctcgt acccggcgtg acttagtcga ttccgcagtc attgtagagt gtatgttcgc
    32161 aggcaggctg gaaaacctga caccgccgca taatccactc gacgtccttg cgcagcaaac
    32221 cgttgccgcc gcggcgatgg aggcattaca ggtagacgaa tggtactccc gcgtacgccg
    32281 tgccgcaccg tggaaagatc tgccaagacg tgtttttgac gccacgctgg atatgctttc
    32341 cgggcgctat ccctctggcg atttttctgc ttttcgcccc aaactggtct ggaacaggga
    32401 gaccgggata ttgaccgtcc gacctggcgc tcaattgttg gcggttacca gcggcggcac
    32461 cattccggat cgtggcatgt atagcgtgtt attacccgaa ggtgaagaaa aggccggttc
    32521 gcggcgggtg ggtgaactgg atgaggagat ggtatatgag tcgcgggtga acgacattat
    32581 cactctcggc gctacctcat ggcggatcca gcaaatcacc cgcgatcagg tgattgtgac
    32641 tcctgctccg ggtcgttctg cccggctccc cttctggcgt ggtgaaggta acggacgtcc
    32701 ggctgaatta ggcgagatga tcggcgattt tcttcattta ctggcggatg gcgcgttctt
    32761 ttccgggact attcccccgt ggctggcaga agaaaatacg aacgccaata ttcaggggtt
    32821 gattgacgag caacgcaacg cgacgggcat cgttccgggg agtcgccatc tggtcctcga
    32881 acggtgccgt gatgaaattg gcgactggcg tattattttg cactctccct atggaagacg
    32941 ggtgcatgaa ccctgggcgc tggcgattgc cgggcgaata catgccctat ggggcgctga
    33001 cgcgtctgtg gtcgccagtg atgacggcat tgttgcgcgc attcctgaca ctgatggtaa
    33061 attgcccgac gccgcgattt ttttgtttga accagaaaag ttgctgcaaa ttgtccgcga
    33121 ggcggtaggc agctcggcac ttttcgccgc ccgttttcgc gaatgcgccg cgcgggcatt
    33181 attaatgccg gggcgcactc cgggccatcg caccccgctt tggcaacaac ggctgcgcgc
    33241 cagtcagttg ctggaaatcg ctcagggata tccagatttt ccggtcattc tcgaaatcct
    33301 acgcgaatgt ctgcaagatg tttatgatct tcccgcactg gaacgtttga tgcgtcgcct
    33361 gaacggtggc gaaattcaaa tatccgatgt aacgaccact acgccctcgc ctttcgccac
    33421 aagtttattg ttcggctatg tcgcggaatt tatgtaccag agcgacgccc cgctggcaga
    33481 gcgccgggca tccgtactgt cgctggacag cgagttactg cgcaatctac tcggacaggt
    33541 cgatccgggg gaattactcg acccgcaggt cattcgccag gtggaagaag agttgcaacg
    33601 actggctcct ggcagaagag cgaaaggtga agaaggattg ttcgacctgc tgcgcgaact
    33661 ggggccaatg accgttgaag acctggcgca acggcataca ggcagcagtg aagaggttgc
    33721 gtcgtatctg gaaaatcttc ttgcagtaaa acgaatcttc ccagcgatga ttagcggaca
    33781 ggagcgtctt gcctgtatgg atgatgccgc caggctgcgt gatgccctcg gcgtacgact
    33841 accagagtca ttgccagaga tttatttaca tagagtcagt tacccgcttc gcgacctctt
    33901 tctgcgctat ctccgggctc atgctctggt cacggctgaa caactggctc atgagtttag
    33961 tctcggtatt gccattgtcg aagagcagct tcagcaactg cgtgaacagg gtctggtgat
    34021 gaatctgcaa caagacatct gggtgagcga tgaagtattt cgtcgtctgc gtttgcgctc
    34081 gctgcaagcc gccagagaag cgacgcgtcc cgttgcagcc acgacctatg cgcgattgct
    34141 gctggaacgt cagggcgtat tacccgccac cgatggtagc ccggcgctct ttgcctcaac
    34201 atcgccaggc gtttatgagg gcgtagatgg cgtgatgcgg gtgatcgaac agcttgccgg
    34261 agtcggttta cccgcctcac tctgggaaag ccagatcctg cctgcccgcg tacgcgacta
    34321 ttcgtcagaa atgctcgatg aattactggc aaccggtgcg gttatctggt cggggcaaaa
    34381 aaaactgggt gaagatgacg gcctggtggc actgcatcta caggcatatg ctgcagaatc
    34441 gttcactccc gccgaagcgg atcaggcgaa tcgttcggcg ctgcaacaag cgatagtcgc
    34501 tgttctggct gacggaggag cctggtttgc acaacaaatc agccaacgga tacgcgacaa
    34561 aatcggcgaa tcggttgatc tctctgccct gcaagaggcg ttatgggcgc tggtctggca
    34621 aggcgtcatc accagcgaca tttgggcacc gttacgcgcc ctcacccgca gcagttccaa
    34681 cgcacgcacc tcaactcgcc gcagtcaccg ggctcgtcgt ggacgtcctg tctatgcgca
    34741 acccatctcg ccgctggtat cttacaacac accaaatctg gctggacgct ggtcgttatt
    34801 gcaggtggag ccactaaacg ataccgaaag gatgctggcg ctggcggaaa atatgctcga
    34861 ccgctacggc atcatcagtc gtcaggcggt gatagccgaa aatatccctg gcgggtttcc
    34921 atcgatgcaa acgctttgtc gaagtatgga agactccggg cgaattatgc gaggtcgttt
    34981 tgtagaaggt ctgggtggcg cgcaattcgc tgaacgtctg actattgacc gatggcgcga
    35041 tctggcgaca caagccacgc aaacgcg
//
LOCUS       DAJVUK010000024        35013 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.024, whole genome shotgun sequence.
ACCESSION   DAJVUK010000024 DAJVUK010000000
VERSION     DAJVUK010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35013
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.024"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            32..1270
                     /gene="dsdA"
                     /locus_tag="OQQ57_001122"
                     /pseudo
     CDS             32..1270
                     /gene="dsdA"
                     /locus_tag="OQQ57_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416867.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
     gene            complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="OQQ57_001123"
     CDS             complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="OQQ57_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HCS1955955.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
                     KGVG"
     gene            complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="OQQ57_001124"
     CDS             complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="OQQ57_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HCS1955956.1"
                     /translation="MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYVYWSMELEDMIS
                     TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA
                     NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
                     ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGY
                     IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
                     VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
                     TATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
     gene            4495..5109
                     /gene="evgA"
                     /locus_tag="OQQ57_001125"
     CDS             4495..5109
                     /gene="evgA"
                     /locus_tag="OQQ57_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system DNA-binding response
                     regulator EvgA"
                     /protein_id="HCS1955957.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL
                     KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
                     KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
                     NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
     gene            5114..8707
                     /gene="evgS"
                     /locus_tag="OQQ57_001126"
     CDS             5114..8707
                     /gene="evgS"
                     /locus_tag="OQQ57_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HCS1955958.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALEEGEVDIVLSHLVASPPLNDDIAATKPLIITFPALVTTLHDSMRPLT
                     SSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDIIPGAIYSEDRENNVSFAEAFITTPYVF
                     VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
                     ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
                     SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
                     IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS
                     DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDHAVYI
                     CGWQDITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
                     GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS
                     FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLV
                     HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
                     QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSILIADDHPTNRL
                     LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
                     LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
                     EALKNNTANDLQLMQEILITFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL
                     NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
     gene            complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="OQQ57_001127"
     CDS             complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="OQQ57_001127"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HCS1955959.1"
                     /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDYDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR
                     FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA
                     RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
     gene            complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="OQQ57_001128"
     CDS             complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="OQQ57_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HCS1955960.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIVYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="OQQ57_001129"
     CDS             complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="OQQ57_001129"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HCS1955961.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
                     VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSSVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            complement(12744..13994)
                     /gene="frc"
                     /locus_tag="OQQ57_001130"
     CDS             complement(12744..13994)
                     /gene="frc"
                     /locus_tag="OQQ57_001130"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HCS1955962.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAAVLQELGYSDDEIAAMKQNHAI"
     gene            complement(14507..15139)
                     /locus_tag="OQQ57_001131"
     CDS             complement(14507..15139)
                     /locus_tag="OQQ57_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HCS1955963.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
     gene            15435..15710
                     /locus_tag="OQQ57_001132"
     CDS             15435..15710
                     /locus_tag="OQQ57_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1955964.1"
                     /translation="MKVNLILFSLFLLVYIMACNVFAFSISGGVSERSYKETEKTSAM
                     TTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            complement(15787..16029)
                     /locus_tag="OQQ57_001133"
     CDS             complement(15787..16029)
                     /locus_tag="OQQ57_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HCS1955965.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTEIFMFLAPACGLMIRFMVGYGRR"
     gene            16382..17302
                     /gene="lpxP"
                     /locus_tag="OQQ57_001134"
     CDS             16382..17302
                     /gene="lpxP"
                     /locus_tag="OQQ57_001134"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HCS1955966.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII
                     EKEIMRAPEQYLWIHCRFKTRPVGESSLYI"
     gene            17658..17729
                     /gene="ypdK"
                     /locus_tag="OQQ57_001135"
     CDS             17658..17729
                     /gene="ypdK"
                     /locus_tag="OQQ57_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HCS1955967.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="OQQ57_001136"
     CDS             complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="OQQ57_001136"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HCS1955968.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRQDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWIVEMPKASMYVWAKI
                     PEPYAAMGSLVFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            19409..21106
                     /gene="ypdA"
                     /locus_tag="OQQ57_001137"
     CDS             19409..21106
                     /gene="ypdA"
                     /locus_tag="OQQ57_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     YpdA"
                     /protein_id="HCS1955969.1"
                     /translation="MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKE
                     LLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY
                     LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWA
                     PTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP
                     LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQ
                     AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV
                     GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR
                     QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC
                     CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV
                     EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRTPVASQATLLL"
     gene            21121..21855
                     /gene="ypdB"
                     /locus_tag="OQQ57_001138"
     CDS             21121..21855
                     /gene="ypdB"
                     /locus_tag="OQQ57_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator YpdB"
                     /protein_id="HCS1955970.1"
                     /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
                     NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
                     YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
                     HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
                     LRLKDLDFEVPVSRSKVKEFRQLMHL"
     gene            21868..22725
                     /locus_tag="OQQ57_001139"
     CDS             21868..22725
                     /locus_tag="OQQ57_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1955971.1"
                     /translation="MKAPGLPADQQFFADLFSGLVLNSQLLGRVWFASQPASLPVGSL
                     CIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPT
                     WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL
                     LHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDNYTQPLTRESVAQFFNITPNHLSKLF
                     AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP
                     GEYSARFQG"
     gene            complement(22728..25223)
                     /gene="ptsP"
                     /locus_tag="OQQ57_001140"
     CDS             complement(22728..25223)
                     /gene="ptsP"
                     /locus_tag="OQQ57_001140"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCS1955972.1"
                     /translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKA
                     DAKSSLALIGTGTLFNDSCSLNISGSDEEQAQRVLEEYIQVRFIDSDSIQPTQAELTA
                     HPLPRSLSRLNPDLLYGNVLASSVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA
                     TLAEQLNQQLRESDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ
                     VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQ
                     FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG
                     VLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPG
                     AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS
                     IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI
                     LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
                     QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL
                     LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED
                     VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG
                     FGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVIMLTLGANEGMNHVKVFSQ
                     LARKLVNKNFRQSLFAAQDAQSILTLLETELTF"
     gene            complement(25248..26285)
                     /gene="ypdE"
                     /locus_tag="OQQ57_001141"
     CDS             complement(25248..26285)
                     /gene="ypdE"
                     /locus_tag="OQQ57_001141"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HCS1955973.1"
                     /translation="MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGS
                     VLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR
                     EECKIPGLLDGDRQGNDVSAMRVDIGTRSYDEVMQAGIRPGDRVTFDTTFQVLPHQRV
                     MGKAFDDRLGCYLLVTLLRELHSAELPAEVWLVASSSEEVGVRGGQTATRAVSPDVAI
                     VLDTACWAKNFDYGAANHRQICNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQAD
                     MFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIKRLT
                     RETVVQLTDFR"
     gene            complement(26285..27370)
                     /gene="ypdF"
                     /locus_tag="OQQ57_001142"
     CDS             complement(26285..27370)
                     /gene="ypdF"
                     /locus_tag="OQQ57_001142"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HCS1955974.1"
                     /translation="MTLLASLRDWLKEQQLDAVLLSSRQNKQPHLGISTGSGYVVISR
                     ESAHILVDSSYFVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW
                     ETAHRWKSELNAKLVSATPDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSE
                     REIAAELEWFMRQQGAEKASFDTIVASGWRGVLPHGKASDKIVAAGEFVTLDFGALYQ
                     GYCSDMTRTLLVNGEGVSAESHPLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRV
                     ITEAGFGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRI
                     EDVVLVTPQGAEVLYAMPKTVLLTGEA"
     gene            complement(27385..28632)
                     /locus_tag="OQQ57_001143"
     CDS             complement(27385..28632)
                     /locus_tag="OQQ57_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HCS1955975.1"
                     /translation="MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGIS
                     RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
                     GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
                     PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
                     FGGWINGVIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
                     VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
                     LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI
                     TALMVVFLRLMMFRKGKLLIDSL"
     gene            complement(28654..28980)
                     /locus_tag="OQQ57_001144"
     CDS             complement(28654..28980)
                     /locus_tag="OQQ57_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-like phosphotransferase enzyme IIB
                     component 1"
                     /protein_id="HCS1955976.1"
                     /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
                     GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
                     IASEQQ"
     gene            complement(29199..30164)
                     /gene="glk"
                     /locus_tag="OQQ57_001145"
     CDS             complement(29199..30164)
                     /gene="glk"
                     /locus_tag="OQQ57_001145"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HCS1955977.1"
                     /translation="MIKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
                     VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
                     TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG
                     FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            30368..31624
                     /locus_tag="OQQ57_001146"
     CDS             30368..31624
                     /locus_tag="OQQ57_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HCS1955978.1"
                     /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR
                     LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG
                     LIVALILGLAGGVSLGPEHPIMTINIALAVAIGARLLPRVNRMEWTILASAGTIGALF
                     GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
                     EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
                     PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
                     LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
                     PAWLLLAGKPMMMVNRPKQQPPHDNV"
     gene            31739..32065
                     /locus_tag="OQQ57_001147"
     CDS             31739..32065
                     /locus_tag="OQQ57_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HCS1955979.1"
                     /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
                     DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGR
                     GHGHRH"
     gene            complement(32206..33444)
                     /locus_tag="OQQ57_001148"
     CDS             complement(32206..33444)
                     /locus_tag="OQQ57_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HCS1955980.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL
                     LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY
                     LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
                     IVVLVVALNIWLLVGTALGL"
     gene            33780..34982
                     /gene="nupC"
                     /locus_tag="OQQ57_001149"
     CDS             33780..34982
                     /gene="nupC"
                     /locus_tag="OQQ57_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HCS1955981.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
BASE COUNT         9234 a         8692 c         8083 g         9004 t
ORIGIN      
        1 gtcacggcga actgcctttc aaggttgaag tggcacgacc tcattggctg aaggtttacc
       61 ttatgttggc ctgaccgaac aggatgttca ggacgcccat gcgcgcttat cccgttttgc
      121 accctatctg gcaaaagcat ttgctgaaac tgctgccact ggggggatta ttgaatcaga
      181 actggttgcc attccagcta tgcaaaaacg gctggaaaaa gaatatcagc aaccgatcag
      241 cgggcaactg ttactgaaaa aagatagcca tttgcccatt tccagctcca taaaagcacg
      301 cggcgggatt tatgaagtcc tggcacacgc agaaaaactg gctctggaag cggggttgct
      361 gacgcttgat gatgactaca gcaaactgct ttctccggag tttaaacagt tctttagcca
      421 atacagcatt gctgtgggct caaccggaaa tctggggtta tcaatcggca ttatgagcgc
      481 ccgcattggc tttaaggtga cagttcatat gtctgctgat gcccgggcat ggaaaaaagc
      541 gaaactgcgc agccatggcg ttacggtcgt ggaatatgag caagattatg gtgttgccgt
      601 cgaggaagga cgtaaagcag cgcagtctga cccgaactgt ttctttattg atgacgaaaa
      661 ttcccgcacg ttgttccttg ggtattccgt cgctggccag cgtcttaaag cgcaatttgc
      721 ccagcaaggc cgtatcgtcg atgctgataa ccctctgttt gtctatctgc cgtgtggtgt
      781 tggcggtggt cctggtggcg tcgcattcgg gcttaaactg gcgtttggcg atcatgttca
      841 ctgctttttt gccgaaccaa cgcactcccc ttgtatgttg ttaggcgtcc atacaggatt
      901 acacgatcag atttctgttc aggatattgg tatcgacaac cttaccgcag cggatggcct
      961 tgcagttggt cgcgcatcag gctttgtcgg gcgggcaatg gtgcgtctgc tggatggctt
     1021 ctataccctt agcgatcaaa ccatgtatga catgcttggc tggctggcgc aggaagaagg
     1081 tattcgtctt gaaccttcgg cactggcggg tatggccgga cctcagcgcg tgtgtgcatc
     1141 agtaagttac caacagatgc acggtttcag cgcagaacaa ctgcgtaata ccactcatct
     1201 ggtgtgggcg acgggaggtg gaatggtgcc ggaagaagag atgaatcaat atctggcaaa
     1261 aggccgttaa taacgtttca acgcagcatc gcaatccttt ccctgggtga gcgatgctgc
     1321 cgatggcgca gacttaagat ccccggtctt acccgctata accccctcct tttatcatca
     1381 cccaacgcct ttcgctgtaa acggcggttt cgcaaaccaa accaaaaccg taagtaagat
     1441 aaaagcaata gccgccatac ggaaaatctc atttgcagaa atagaaagtg actgctgggt
     1501 tatttcatta ttaatttcat taagaactcc tgaaagcgaa ccataatatt tatccataat
     1561 ttgtgacgat gaattaaaca cggggttaaa ttgatcgatg gttgctgtca actgactatg
     1621 gtgtaacgat tcgcgtcgtc cccacagcgt cattgtcaac gacgtaccaa ctgatcctga
     1681 caaggtacga aaaaaattac tcatactcga ggcattggca aatttattat ctggcaagcc
     1741 tgaaaacgaa atcgttgtta agggtaaaaa gaaacaggca acggcgaatc cctgaaaaaa
     1801 ctgcggcaaa atgatgcctg taaaatcaat cgttggcata aatgtcacag aacgccagta
     1861 atagcaaacc gcatacatca aaaaactaaa tgtcactaac aaccgcatgt ctattttgtt
     1921 gccataacgt cctatcaaag gtgaaattaa tagtggcatg atgccgatgg gcgcataagc
     1981 aagtccggcc catatcgcat tataccccat cgtttcctgg agtaactgcg gcataaggac
     2041 gatcgctcca gagtaaaata aatacgcgca tgtgatactc acaataccaa tggtgaagtt
     2101 acgggactta aacaaactga gatcaagaat cgggttctct gaggtcgact cccaaatgac
     2161 taaagagatc agagaaataa ctgatactac tgttaatatt attattgtac tcgagttgaa
     2221 ccaatccaga tcgcgccctt tatcaagcat aatttgcaag ccaccaacac cgagcactaa
     2281 cagggtcagt cctggtagat tcattttgac cggtgaagtc tcagtttctc ttcctttaag
     2341 taaggttaag cataatgtca ggacgataat ccccataggg acattgatta aaaatatcca
     2401 accccagcta aagttatcac aaatataacc gcccaatatc ggcccacata tcggagcgat
     2461 aatcacggtc attgaccata atgccagagc aaatgttctt ttttctggcg gataattcct
     2521 taataataaa ctctgtgaca gtggaattaa cggccccgcc attaacccct gaacgactct
     2581 aaaaaatatc agcacatcaa gattggtcga taggctacac attaatgaag acagcgaaaa
     2641 aaaggttact gaaagtaaaa ataatcttaa ttcgcctatt ctttgtgcca acctgccagt
     2701 aacagggatc gcaatggcat ttgctacacc aaacgaggtg ataacccagg tgccttcgtc
     2761 tgttgatgct cccagaaagc cagatattgt cggtattgcg acgttagaaa tagtggaatc
     2821 caacatttgc ataaatgtcg ctaatgacaa tgcaatagtg acgcaccata acgtcccacc
     2881 ggttaatggt gccggagttg atttagtgat tgccattaaa gttgtccatt atgcgaaata
     2941 atgttgctaa tttctttttc tatcggactg gtatcgataa ctaaagcctt actggtataa
     3001 gccggcatgg aggtcacggt tgaagccagc tcaggcatct cggcaatgtc ttcgttcttc
     3061 gtatcaatag ttgctgtcat cgataaacca atacgcaagg gatgttccat gagttctttt
     3121 ggatcaagag aaacttcaac cggtacacgc tgaacgattt tgatccagtt ccctgtcgca
     3181 ttttgtgcag gtaataagga gaacgcattg ccggttccca tattgatccc tgtcacccga
     3241 ccatgaaaca caacattttc accataaaga tcgctgataa tattgaccga ttgaccaatc
     3301 cgcacatccg tgagttgtgt ttctttaaag ttggcattaa cccacatttg acgtgccggt
     3361 acgacagcca ttaacgattg tccggggctc actgtttcgc cgacctgaac acttctctgg
     3421 gcaatatagc cggtaaccgg actcttaata tccgtacgtt taagcgccaa ccaggcttct
     3481 ttagttgcat ccgccgcttc aacgacttgt ggctgacggt ttaatggtgt gttcattact
     3541 aaagctttat tcgctttata agcctggata gcggcattca atgccgcttt gctacttatt
     3601 aacgtatctt tggtatgctc cagcgtttct tttgaaataa ccccctgctt cgctaacggc
     3661 actcgacggt tataatcttc taaagattgt tgatactgaa tacgtgctga agcgacttcg
     3721 gcactgtatt gtttatcctg taagtatagt ttattcgttt gccgaacaat atttgccaga
     3781 ttatttttag ctttattgag tgcgatagtg gcatcagttt tatccagtga aactaaaatg
     3841 tcaccttgtc gaacgtagtt cgtatcttta tgattaacga cagtgacact acctgagact
     3901 tgtgcagaaa ttggatctgc attccccgtg acataggcgt catctgtact aatcatgtct
     3961 tctaattcca ttgaccaata gacataggca cctgaaaacg caataaataa aactaccgcc
     4021 aataaagaaa agtattttct tctgttagaa tgttttttat ttgaattaat ctgttccact
     4081 attatctctc atttctcata gatgaaattt atgaattgaa tgaaaagagc attcattctt
     4141 catatcaaac acagtgcatg tgttgcacat tatcccagga acgttggagg cctaatttaa
     4201 atgaggtgca aaaaaaacaa cagaggacta aaccgtggct tttgcaatac aattcttacg
     4261 cctgtaggat tagtaagaag acttatagtg ctaacttgaa actataaatc atcggtacaa
     4321 cccctgattt tattgttgac atttcattta tgccgactat ttatatggta tacttgtcga
     4381 attatcttaa aggaagctca gattttctta tttttattga gaaaatgaga tgacgcctta
     4441 tgtctgtatt actacaggga gaagggagat gcttcattgc aaagggaata atctatgaac
     4501 gcaataatta ttgatgacca tcctcttgct atcgcagcaa ttcgtaattt attgatcaaa
     4561 aacgatattg aaatcttagc ggagttgact gaagggggaa gcgccgttca gcgggtggaa
     4621 acacttaagc ctgatatcgt catcattgat gtcgatatcc ccggagttaa cggtatccag
     4681 gtgttagaaa cgctgaggaa gcgccaatat agcggaatta ttattattgt ctccgctaaa
     4741 aatgaccatt tttacgggaa acattgtgct gatgctggcg ctaatggatt cgtgagtaaa
     4801 aaagaaggca tgaacaatat cattgcggct attgaagctg caaaaaatgg ctactgctat
     4861 ttccccttct ctctcaaccg gtttgttgga agtttaacgt ccgaccagca aaaactcgac
     4921 tccttatcga aacaagaaat tagtgtcatg cggtatattc ttgatggcaa ggataataat
     4981 gacattgctg aaaaaatgtt catcagcaac aaaactgtca gcacttataa aagtcgcctg
     5041 atggaaaaat tagaatgtaa atcactgatg gatctttaca cattcgcgca acgtaacaaa
     5101 atcggctaat cacatgaagt ttttacccta tttttttctt ctctgttgtg gtctttggtc
     5161 gaccataagt ttcgcagacg aagattacat cgaatatcgt ggcatcagta gtaacaaccg
     5221 tgtcacactt gatccagtac gtctgagcaa caaggaatta cgttggttag cgagcaaaaa
     5281 aaatcttgtg attgcagtac acaagtccca aacggctacc ttgttgcata ccgattcgca
     5341 gcaacgggtt cgtggtatta atgctgatta tttaaatctt ttaaaaagag cgttaaatat
     5401 caaattaaca ctccgggaat acgccgatca tcaaaaagca atggacgcgc tggaagaagg
     5461 tgaagtcgat atagtgttat cacatttagt tgcttcgccg cctcttaatg atgacattgc
     5521 tgcaaccaaa ccactgataa ttacctttcc ggcgctcgtc accacccttc acgattcaat
     5581 gcgaccgctt acctcatcaa aaccagtaaa tattgctcga gtagcaaatt atccccctga
     5641 cgaggtaatt catcaatcat ttccaaaagc aacaattatc tcttttacaa atttatatca
     5701 ggcattagca tccgtctcag ccggacagaa tgattacttt attggtagta acatcattac
     5761 cagcagtatg atttcccgct atttcactca ctccttaaat gtagtgaaat attataactc
     5821 accgcgtcaa tataattttt tcttgaccag aaaagaatct gtcgttctta atgaagtact
     5881 caatcgattt gttgatgctt taacaaatga agttcgctat gaagtttcac aaaattggct
     5941 tgatacagga aacctggcct ttctgaacaa accattagaa ctcactgaac atgaaaaaca
     6001 gtggattaag caacatcccg atttaaaggt gctggaaaat ccttactctc ctccctattc
     6061 tatgacggat gaaaatggct cggttcgggg cgttatgggg gatattctta atattattac
     6121 cttgcaaaca ggtttaaatt tttctccgat caccgtttca cacaatatcc atgccggaac
     6181 acagcttaac cccggtggat gggatataat acctggcgct atttatagtg aagatcgaga
     6241 aaataatgtt tcatttgcag aagctttcat aacaacgcca tacgtttttg tcatgcaaaa
     6301 agcacctgac agtgaacaaa cattaaaaaa aggaatgaaa gttgccattc catattatta
     6361 tgagctgcat tcgcaattaa aagagatgta tccggaggtt gagtggataa aagtcgataa
     6421 cgccagcgct gcatttcaca aggtcaagga aggtgaactt gatgctctgg tcgcgacaca
     6481 gctaaattcg cgttacatga tcgatcatta ctatcctaat gaactgtatc attttcttat
     6541 tcccggcgtt ccgaatgcat cgctttcgtt cgcttttcct cgcggagaac cggaacttaa
     6601 ggatattatt aataaagcac tgaatgcaat tcccccaagc gaagttctgc gcctgacgga
     6661 aaaatggatt aaaatgccca atgtgaccat tgacacatgg gacctctata gcgagcaatt
     6721 ttatattgtt acgacattat ccgttttatt agttggcagt agccttttat ggggattcta
     6781 cctgttacgc tcagttcgtc gtcgtaaagt cattcagggt gatttagaaa accaaatatc
     6841 attccgaaaa gcactctcgg attccttacc aaatccaact tatgttgtaa actggcaagg
     6901 taatgtcatt agtcataata gtgcttttga acattatttc actgcggatt actacaaaaa
     6961 tgcaatgtta ccattagaaa acagtgactc accctttaaa gatgtttttt ctaatgcgca
     7021 tgaagtcaca gcagaaacga aagaaaatcg aacaatatac acacaggtat ttgaaattga
     7081 taatggcatc gagaaaagat gcattaatca ctggcataca ttatgcaatc tgccagccag
     7141 cgatcatgct gtttatattt gtggttggca agatattacc gagacgcgtg atttaattca
     7201 tgcactcgaa gtagagagaa ataaagcgat caatgcaact gtcgcaaaaa gtcagtttct
     7261 ggcaacaatg agtcacgaaa taagaacacc aataagctcc attatgggct tcctggaact
     7321 tctgtcgggt tctggtctta gcaaggagca acgggtggag gcgatttcac ttgcctacgc
     7381 caccggacaa tcactcctcg gcttaattgg tgaaatcctt gatgtcgaca aaattgaatc
     7441 gggtaactat caacttcaac cacaatgggt cgatatccct actttagtcc agaacacttg
     7501 tcactctttc ggtgcgattg ctgcaagcaa atcgatcgca ttaagttgca gcagtacatt
     7561 tcctgatcat tacctggtta agatcgaccc tcaggcgttt aagcaggtct tatcaaattt
     7621 actgagcaat gctctcaaat ttaccaccga gggggcagta aaaattacga cctccctggt
     7681 tcacattgat gacaaccacg ctgttatcaa aatgacgatt atggattctg gaagtggatt
     7741 atcgcaggaa gaacaacaac aactctttaa acgctacagc caaacaagtg caggtcgcca
     7801 gcaaacagga tctggcttag gcttaatgat ctgcaaagaa ttaattaaaa atatgcaggg
     7861 cgatttgtca ttagaaagtc atccaggcat aggaacaaca tttacgatca caatcccggt
     7921 agaaattagc cagcaagtgg cgactgtcga ggcaaaagca gaacacccca tcacactacc
     7981 tgaaaagttg agcatattaa tcgcggatga tcatccgacc aacaggctat tactcaaacg
     8041 ccagctaaat ctattaggat atgatgttga tgaagccact gatggtgtgc aagcgctaca
     8101 caaagtcagt atgcaacatt atgatctgct tattactgac gttaatatgc cgaatatgga
     8161 tggttttgag ttgactcgca aactccgtga gcaaaattct tccttaccca tctgggggct
     8221 tacagccaac gcacaggcta acgaacgtga aaaagggtta agttgcggca tgaacttatg
     8281 tttgttcaaa ccgttgaccc tggatgtact gaaaacacat ttaagtcagt tacaccaggt
     8341 tgcgcatatt gcacctcagt atcgccacct tgatatcgaa gccctgaaaa ataatacggc
     8401 gaacgatcta caactgatgc aggagattct catcactttc cagcatgaaa cgcataaaga
     8461 tctacccgct gcgtttcaag cactagaagc tggcgataac agaactttcc atcagtgtat
     8521 tcatcgcatc cacggtgcgg ctaacatcct gaatttgcaa aagttgatta atattagcca
     8581 tcagttagaa ataacacctg tttcagatga cagtaagcct gaaattcttc agttgctgaa
     8641 ctctgtaaaa gaacacattg cagagctgga ccaggagatt gctgttttct gtcagaaaaa
     8701 tgactaaata gcggctccca caatgttcaa atgtgggagc tatttaccag cacatcttac
     8761 atttatgatg agaactcctg gcgaatttgt tccccatgct ggtcgagcgt tgccgctccc
     8821 ggcataacat gcgggtccgc gcagccgctg atttttatcg gattacccgg catcattatt
     8881 cccccggctt caatcaacat atttctcgcc tgagtttgtg gcaatttaat ggcctcagcc
     8941 acacttaata acggcgcgac gggtacacca acttcatgta ttctggctaa ccaaacttca
     9001 gctgcctgcg tttttaacgt ccgctcaata tattgtttaa gaatagcctg gttttgtacg
     9061 cgtaaaatat tgctgctaaa tcggggatca ttaaccagtt ccgtaagctc cagtgcctgg
     9121 cataacgcag aaaaaagctt gtcattacca caacaaatcg taatcggctt atcctgagta
     9181 ttgaaaacat caaaaggtgc catgtaggga tggcgatttc ccagacgttg tggtgacttc
     9241 cctgtcgcga tatatgccat cagaccatgc tccagaaaac tcagcgtggc atcaaacatc
     9301 gctatatcga catgcgcccc tctctggctc ttttcgcggc cataaagtgc actcactatt
     9361 ccgctgaata aatagacacc gccgcataga tccgcaagag atgtaccaac gcgcactggc
     9421 ggagcatcag gatatcctgt ttccatcatt atcccgctca ttgcctgaat gatggtatcg
     9481 taggcaggag catcttttag cggaccggta tgtccgaaac ctgacgatga agcatatatg
     9541 aggcgcgggt tgatttcttg aagcgtttcc catgaaaacc ccagtttttc cattgtacct
     9601 gggcgaaaat tctcagctaa tacatcagct tgtttgagca tatttataaa tatactttta
     9661 tcgtaatcat tctttaaatc aagaaccaca ctctctttgc catgattaat aaaactgtaa
     9721 tagagtgact gtccatccac atagggacca aatgtgcggg tatcatcacc atgacccggc
     9781 ggctcaactt taattaccct tgcgcccata ttacaaagaa gttgagttcc gaaaggtcca
     9841 ttaaggacat gtgtcatatc gataactaat aagccttcaa acggcccttt gctttcatta
     9901 tttgtcattt gcttatgcct tgaaaaaagc cgaaggtgaa aagacacttc ggcatttatg
     9961 taaaatcaat aacatgatta attatgaaac cagtcgactg acataaatcc acaagggagc
    10021 cgtgacgaca aagcccagta cgctcacagc caatgacgct gtaccagtac gggtgtagac
    10081 attaaaccgg ctggcaataa taattccgga gaatgccggc ggtaatgcgc ctgccagtac
    10141 catcatctgc agatgttcgc tgttcaaatg acatgccata ccaacgagaa gcagtgccag
    10201 tggcatcaga atcagcttca ggaaggtgtt ataaacaatt tcggcactga actcgaattt
    10261 atgtgcagcc agagtcaacc ccgcagcgaa taccgctacc cctgagttag ccttcgcaat
    10321 cagattaaag gttgggtccc atgctgccgg aatttttacc ccaaccaaca ccaggatcgt
    10381 tgccagaaca ggtgcccata ctactggctc ctttgccgca gaaattaatg cactcagatt
    10441 actattcttc ttaccatccg ctcctgaaga aggattcagc aaatacagac caataggaat
    10501 agtaattgcg ttaacaataa tagaaataat tgctaccact aaacctgttg atacggaatc
    10561 accataaata ggatcgagaa ctgcaaaccc caggaatcca atggtaggtg aacctgcaat
    10621 taatgcacat acagctgctt ctgcatgggt acgtttaaaa aatttgtagc aaccgaacca
    10681 ggagaaaaag aaacatccga caataaccac aagtgataca agggtcagac gagtgtccgc
    10741 aaaaatcatt tccctgtttg cccgagtaat agatacaaat agagccgcag gaagcgcgta
    10801 gtttaatacc agtttattaa atgcgcgggc ttgatcttct gaaaaagttt ctcgtctgcc
    10861 gctaaaataa cccaacagca tgattacgat aataggcaat aaatcgccaa taaaaaatgt
    10921 tagcataata gtatttccga taagggtccc ctcaccatcg cataatgaat tggcaagagg
    10981 agacgatgtc agtatttaat taccagcgac ttgttttggg ttaagtttgg taatatggcc
    11041 actttcagtt cctgctgcag ggtcgatgac cacattaata atggtcggtt tgcgcgactg
    11101 aataccggtg gttaaagcat gacgaagttc atctgtcgtg gtgacgttat agccaacgcc
    11161 acgaaacgca tccattaatt tgtcatacct tgcatggtgc aacagatccg ttggagatgg
    11221 tgcaccagcg ccactgagat caacaccgtc tcctctgtag atgccgccat tattaaaaat
    11281 aacgatcgtc accggcaggt tatatcgaca aatcgtttca atttccatcc cactgaaacc
    11341 aaaagcacta tcaccttcaa tggcgacaac cggagaacca gaagtcacgc tagcaccgat
    11401 ggcatagccc ataccgatgc ccatgacacc ccaggtacca caatccagac gacgacgtgg
    11461 tttatacata tcaataatat ttcgtgcatt atccagggta tttgcacctt cattaactaa
    11521 ataaatatcc tggttctcgc gcaatacgtc gcgcacagaa cttaatgcat taaagtaatt
    11581 taatggttga gtatctgtac ttaatttttc atgcattttt tgtgcatttt gctgcttgtg
    11641 gatatttaaa atatcgcgcc ataccagtgg agtcgtaaat gtgttttgtt tcagttctgc
    11701 cagcatacct tgcatactgg atgcaatatc accaatgact ggcacagcaa tggggcggtt
    11761 gctgtcaatt tcctgcggtt caatatccag ttgaataaac tgtgtatctg ccgcccatcc
    11821 ttttttaccg tgtgccaata accaattcag tcgtgcacca acaagcatga caacgtcagc
    11881 atttgccagg gcaaacgaac gcgcagctgc cgcagaaagt ggatgcgtat cttcaaggat
    11941 ccctttcgcc atagacattg gcaggaatgg aatctgagca ctttcaataa attcacgaag
    12001 ctgttcatca gcttgtgaat acgccgcgcc tttgccaagg ataattaatg gccgttcagc
    12061 ttttgctaaa agcgaaattg cgctagtgac tgacttcggg catggcaata atgctggcga
    12121 cggattttca actttaacaa tcgtggttaa cgcttcgtct ttttccatcg tcgcggccag
    12181 gacatttgct ggcaaatcaa gataaactcc gccagggcga cccgatacag agacccggat
    12241 agcgcgtgcc aatgcaatgc caagatcctg cggctgatta acgcgaaatg ctgctttggc
    12301 atacggtttt gccgcattca tttggtccag ctcttcataa tcaccttgct gtaggtcgac
    12361 gatcgcgcgg tcgctggagc cgctaatcat gatcatcgga aaaccattta ccgttgcgtt
    12421 ggccaatgcc gtcaaaccat tgaggaatcc tggcgcagaa actgtcaggc agatccccgg
    12481 tttttgggta agaaaaccgc ttgccgcagc ggcatagcct gccgactgct catgacgaaa
    12541 accaatataa cgaatgcctt ccgcctgggc atggcgtgcc atatccgtca caggaatacc
    12601 tacaacacca taaatagtgt caatattatt ctgttttaat gcttcaacga tgatatgcat
    12661 accatctgtc atttgaagtt gatctgacat gattaataac ctcgaaattt ttataaattg
    12721 ggagccagaa gcccccgtta atatcagatg gcgtggtttt gcttcattgc agcaatttca
    12781 tcgtcgctat aacctagctc ctgcaataca gcagcggtat gttcacctaa tagcggcgca
    12841 gctttaatat ccggcgtaaa agcagagaat ttcattggac aaccaacggt cagatatttt
    12901 ccacgcaacg gttgttccac ttcaacaaca ctgccacttt ggcgcaaaga gggatcaagt
    12961 gaaatttctt tcatacttaa aaccggtgca caaggaatat caaactgagt caaataggcc
    13021 accgcttcat gtttatcaat agtgacagtg tatttttcga tttcagcaaa aatatcgaaa
    13081 atatgtggct gtcgggcatg ggctgtactg tatgccggat cggtaatcca ttctggtttg
    13141 ccgatggctt tacaggtgtt ttcccagttt tgctcctgaa tagtgaaata aatataggcg
    13201 ttcggatcgg tttcccagcc tttacatttc aggatccagc caggctgacc gccaccacct
    13261 gcattaccac cgcggggaac tgcatcacca aatgtaccat tcggatactg cgggtattct
    13321 tccagataac ccaatttatc gagacgctgc tggtcacgta atttcacgcg gcaaaggttc
    13381 aatacggcat cctgcattga catggtgact cgttgcccac gccccgtttt ttcgcgatgc
    13441 agcaaagcag caagcaaacc gatcagcaaa tgcattccgg tgttgctgtc acccaacgct
    13501 gcagcgctta ccagcggcgg accatcccaa aaacccgtag tggatgccgc gccacccgct
    13561 gcctgagcaa cgttttcata ggcttttaca ttcacataag gcgaacactc atcaaaccct
    13621 ttgatcgaac caaaaatcag acgtggattg atttcttgaa tatgctccca ggtgaagccc
    13681 atgtgatcaa tggcccctgg atgaaagttc tcgactaaga tatcagcttc gcggatcagc
    13741 ttttccatta cctctttgcc ttccgctgtt ttggtattta actcaataga acgtttgtta
    13801 ctgttaagca tggtgaagta aagcgcatcg atatcaggaa tatctcgcag ctggtgacgc
    13861 gttacgtcac caacgccggg acgttcaatt ttaataacgt cagcgccaaa ccaggccagc
    13921 atttgagtac aagatgggcc agattgcaca ccggtgaaat cgagaacttt aattccttga
    13981 agtggagttg acatagcaat acctattagt taattaaata tgtgttaatt tagcgtttat
    14041 ttaaggcgta atatcttcta taaataaccc gcaaaatatc gtcgtagctg cactcgatat
    14101 ttttaaaatc ctgtatcaag tgctgaaaat catttcatcg ccacttccaa ttcctttctg
    14161 catggtaagt agtgaggacg aaaagaagaa tatgataaat attgattcgt ggtaatcaga
    14221 gagagtcgcg acatttgtga tgttattctt acaactgtaa gaagcgccgg tgatttacaa
    14281 gtaagggtat gattacgctt tttaaagcgt accataaaac ataacataat aaatgatttg
    14341 tgatgacacg ggattattgg ggtttacttt gaggaagata aaatgcgtgt ttatagaacc
    14401 gcgagcgcca aataatttta tgaccacaac ctgtcgtatt gtggtcataa aaaattgtcg
    14461 gctggaggga gttaaatcct ttacctcaat atactgcctg tcagcattag ttcacaaaca
    14521 gtgcttcgct gtcgacgatg attccatctt ccgcaccttt cagcgccagg tttgcctcgt
    14581 agtattgctt tttatcaagc agtttctgcg catcagcaag tgcattacga gtctgtttaa
    14641 gcggcatcag atattggttt tccattacgc caacaccggc caggcgaagt tcttccattg
    14701 cgcccttttt atcccctttc gccatttttt cattggcaat ttttatcgcg gcttcttttt
    14761 cgggagttgc tacataactc tcagaaattc cgacagatgc attaatgaca atatattggt
    14821 catcattgag attggtcttt ttacctggct tagcgaactt tgcccattcg gtactgtcat
    14881 ctgacagcaa agcggaagct tcattggtca gttcttttgc cttttctgga tcgccatgaa
    14941 acagagccag gcgcgctacc tgcacgtcac gcatcgcata taaaccttgt tcagagatac
    15001 gctctgctgc tgccgttttc tgggtttgct gaacttgctg agtttgctgt tgtgccgcta
    15061 ccggtgcatt atcagcagcc catacagttg aagatgccag aattgctgtg accatcgtag
    15121 ccataattaa acgtttcata cttacctcat tctttaacag ttttagaaaa cgccgccatc
    15181 atattgggtg agcatgaaat gagaaatcag agagcaacgg tcattttgaa agggttatct
    15241 tacagttgta gttattatcg caagaagtat tttagtctta caattgtagg aatctgcttc
    15301 ctgtcgcaga gaactattct tatgtaccac aaagagatgt catttattat atcgatgtaa
    15361 atattgatta attatatgta aatacagcca taacatcgta ggttctcagt gaaccatttt
    15421 caggataact ttctatgaaa gtaaacttaa tacttttcag cttattttta ttggtctata
    15481 ttatggcatg caatgttttt gcattttcca tttctggtgg tgtaagtgag aggagctata
    15541 aagagactga aaaaacatca gcgatgacga ccacacactc tacaaaactt cagccatcac
    15601 aggcgatttt gtttaagatg agagaagatg cgccaccatt aaacctcaca gaagaaatca
    15661 cgcctactta tccgacaaag gcgaattatc ttattcatcc tgtgcgatag cgtctgtcac
    15721 atggcaggtg aacaatcatg tctgatgctg atgtgaacac ctgcccaaat gagccatcct
    15781 gacccactat cgcctgccat accccaccat aaagcgaatc atcaagccac aagccggggc
    15841 aagaaacata aatatctccg tcactagttc attaccgcca gttaaccaca tggtgaagta
    15901 ataaatgagt gcagcgagga tcaccatgcc gaagaaagaa gagaccgccg ataccacgtt
    15961 cagtacctga ccgatgtagc cgcttacgca gacaatacac agggcgagaa acatccataa
    16021 ataaatcata gctcaacctc ctgccgcgct aaaaaacctg taacttcagt cactttaata
    16081 gtaagacaat ccttaacctc tggcaatttt tgctaagcat caatgaaaac agcatgttaa
    16141 atgcaagact gttgtgtacg gaaaaatatt tactttgcac gattaataat cagtagctga
    16201 aagcagtcag cgagtgataa agtacagata ccgcattcat gctcctcgtg gttatgtcct
    16261 gactagtctt tacacacttt acaggaacca ttgtcgtaca tgatggccca accaattgag
    16321 tgtaccgctg tcgacatgga atcttctgcg atacaacaat tcgtatctac agaaggtaac
    16381 tatgtttcca caatgcaaat tttcccgcga gtttctacat cctcgctact ggctcacatg
    16441 gtttgggctt ggtgtactct ggctttgggt acagcttcct tatcctgttc tctgctttct
    16501 cggcacgcgt attggcgcaa tggcgcgacc attcctgaaa cgtcgtgaat ctatcgcccg
    16561 taaaaacctg gaactttgtt tcccgcagca ttctgcggaa gaacgcgaga agatgattgc
    16621 cgaaaacttt cgttcactcg gcatggcgct ggtagaaacc ggcatggcat ggttctggcc
    16681 cgacagtcgc gtacgtaaat ggtttgatgt tgaagggttg gataacctta aacgcgcaca
    16741 aatgcaaaat cgcggcgtaa tggttgtcgg cgtccatttt atgtcgctgg aactgggcgg
    16801 ccgcgtgatg ggactgtgcc aaccaatgat ggctacctat cgtccacata ataatcagct
    16861 gatggaatgg gtgcagaccc gtgggcgcat gcgctctaac aaagcgatga tcggcagaaa
    16921 taatctgcgc ggcattgtcg gtgcactgaa gaaaggtgaa gcggtatggt ttgctcccga
    16981 tcaggattat ggtcgtaaag gcagctcctt cgcgccgttc tttgcggtgg aaaatgtcgc
    17041 cacaaccaat ggcacctatg ttctctcccg tctctctggc gcagccatgt tgaccgtaac
    17101 gatggtaaga aaagcggatt acagcggata tcgtttgttc atcaccccag agatggaagg
    17161 ctacccgaca gatgaaaatc aagccgctgc ctatatgaac aagattatcg agaaagagat
    17221 catgcgcgca ccggagcagt acctctggat ccactgtcgc tttaaaacgc gcccggtggg
    17281 agaatcgtcg ttgtacattt aacaaactgc tcttactctt tccctcctca aatcggccat
    17341 aataacctca tggtttttat ggcttttttc ttaaggtttt ttccttcgct gaatatctaa
    17401 ttattaccgt cagaaattaa actgtcgccg atatgagaca cttgtaagtt actaaaagta
    17461 aataagaaaa tgcctcttgt ctcgtttcag ttttaggcgt acattagcgc cgtctcgagc
    17521 agtttagctc agaattctgg ggtgatgccc acggtaaaat acagggcttt taaggtcgct
    17581 ttgcccagtg tcaactcact gtatcaggtg taatgaagtc attcaggcgt aacagcaatt
    17641 acgcggagag atgtaaagtg aaatatttct ttatgggcat ttcttttatg gtcatcgttt
    17701 gggccggtac ttttgccctg atgatctaaa agcaaactgt gcaatgaaaa acaggagcca
    17761 tcaggctcct gtttgcattt ctgacgacgg tgtttattcc gcgttttcgt gaatatgttt
    17821 gctgctggcg ggtagtaaac cgtcggcacg gaacatcgct ttaatccctc tgatggcctg
    17881 acgaatacgg tcgcggtttt caatcagtgc aaagcgaaca tgcgtatcac catagtcgcc
    17941 aaagccaatc cccggcgaga cacagacctt cgcttcgtta agcaatttct tggcaaatac
    18001 cagcgagccc atggcagcat acggttccgg tattttcgcc cagacataca tcgaagcctt
    18061 cggcatttca actatccagc ccgcttcatg cagcccttta accaatacat cacggcggcg
    18121 tttgtactgt tcggcaatgt cgcgcacgca ctgttgatcg ccctccagcg ccgcaatcgc
    18181 cgccacctgc aacggcgtaa aggtgccgta atcgtgatag cttttaatac gagccagggc
    18241 gctgaccagc gttttgttgc caaccataaa gccgatacgc cagcccgcca tgttgtagct
    18301 tttcgacagc gtaaagaact cgactgccac atcgcgtgca cccggtacct gcatgattga
    18361 cggcgctttc cagccatcgt agacgatatc ggcataggcc aggtcgtgga ccaccagcac
    18421 atcgtagcgt ttcgccagcg ccacaacctt ttcgaagaac tccagctcca cgcattgcgc
    18481 ggttggattc gacgggaagc cgaggatcat catcttcggt ttcggataac tttcacgaat
    18541 ggcgcgctcc agttcgttga agaaatcgac accttccacc agcggcactg agcgtacctg
    18601 cgccccggca atcaccgcgc cataaatatg gatcgggtaa cttggattcg gcaccagcac
    18661 cgtgtcacca tgatccagcg tcgccagcat cagatgcgcc aggccctctt tcgaaccaat
    18721 agtgacgatg gcttctgatt ccgggtcgat ttcaacgtcg tagcgatcct gataccagcg
    18781 ggaaatggcg cgacgtaacc gcggaatgcc gcgtgaagtg gagtaaccat gcgtgtcctg
    18841 gcgctgggcc acagtacata atttttcgac gatatgcggc ggagtcgcac cgtccgggtt
    18901 acccatgctg aaatcgataa tatcttcgcc gcgccgacgc gcagccattt tcagttcagc
    18961 ggtgatgtta aaaacgtagg gcgggagacg atcaatgcgc gtaaagcgac gttcagggcg
    19021 agtgtcagcc ataatttcct cagattaacg ttagcgcccg gaccgtccga gcgacgctgc
    19081 cacaatggtg gctgttttga aaatagcctg attaatttct gtctgtccag cgttttagaa
    19141 catttttatc aatggcttta aatgaggaac tacacttcaa aaacaggaaa tttttctacg
    19201 ctaacaagaa aattaccacc aattttatta acattataat ttcaataaat ttaccagcca
    19261 gaagtgcatt atcaagagat acattgctaa tacaccattt atctttcaat ccccttttaa
    19321 atttatggtt tttcctcaaa aacggcctgc tggtcatcag ccttcaggtt acctatcata
    19381 gaggtttaat ccttattcag agtcacccgt gcacgaaata ttcaacatgc tgctggcggt
    19441 cttcgatcgg gcagcgttaa tgcttatctg cctgttcttt ctcatccgta tccgcctgtt
    19501 tcgcgagctg ttgcacaagt cggcacactc cccaaaagag ttgcttgctg ttaccgccat
    19561 tttctcgctg ttcgccctgt tcagcacctg gtccggcgtt cccgtagaag gctcgctggt
    19621 gaacgtacgt attatcgcgg tgatgtccgg cgggattctg tttggcccgt gggtaggcat
    19681 cattaccggc gtgattgcgg gtattcaccg gtatttaatt gatatcggcg gcgtgacggc
    19741 gatcccctgc tttatcacca gcattctggc gggttgtata tcaggctgga taaacctgaa
    19801 aatccccaaa gcacagcgct ggcgcgtcgg tattctcggc ggcatgttgt gtgagacgtt
    19861 gaccatgatt ctggtaattg tctgggcacc aactaccgcg ttggggatcg atatcgtctc
    19921 taaaatcggc attccaatga tcctcggtag cgtctgtatc ggctttattg tgcttctggt
    19981 gcaaagcgtt gagggcgaaa aagaggccag cgccgcgcgg caggccaagc tggcgctgga
    20041 tatcgccaac aaaacgctac cgctgtttcg ccatgtcaat agcgagtcat tacgcaaggt
    20101 ctgcgaaatt atccgcgatg acattcacgc cgatgcggtg gcgattacta ataccgatca
    20161 tgtgctggcc tatgttggcg tgggtgaaca taactatcag aatggcgatg acttcattag
    20221 cccgactacc cgtcaggcga tgaattacgg aaaaatcatc attaaaaaca atgatgaagc
    20281 ccaccgcaca ccagagattc attccatgct ggtgatccca ttgtgggaga aaggcgttgt
    20341 gaccggaacg ctgaaaattt actactgcca cgcgcatcag ataacctcgt cattacagga
    20401 aatggcggtt ggtctgtcgc aaatcatctc cacgcaactg gaggtttcac gcgccgagca
    20461 gctacgtgaa atggcaaata aggcagagct tcgcgccctg caaagcaaaa ttaatcccca
    20521 ttttctgttt aacgctctga acgctatttc atcgtcaatc cgtctgaatc cggataccgc
    20581 tcgccagttg atctttaatc tgtcgcgtta tctgcgctat aacattgaat taaaagacga
    20641 tgagcaaatc gatatcaaaa aagagctgta tcaaattaaa gactatattg ccattgagca
    20701 ggcccgcttt ggtgacaagc tgacggttat ctatgatatt gatgaagagg tgaattgctg
    20761 cattcccagc ctgctgatcc agccgttggt ggagaacgcc attgtccacg gtattcagcc
    20821 ttgcaaaggt aaaggcgttg tcaccatcag cgttgcagag tgcggaaatc gggtacgcat
    20881 tgcggtgcga gataccgggc acggcatcga tccaaaggtg attgagcggg tcgaagcgaa
    20941 tgaaatgccg ggcaataaaa ttggcctgct gaatgtccat catcgcgtga agttattgta
    21001 tggcgagggg ctgcatatcc gccgcctgga gccggggacg gaaattgcgt tttacattcc
    21061 taaccaacgc accccagtcg cctcacaggc tacgttattg ctttgagccg gagtgatatt
    21121 gtgaaagtca tcattgttga agacgaattc ctggcacaac aggaactgag ctggctaatt
    21181 aaagagcaca gccagatgga gattgtcggc acctttgacg acggtctgga cgtgttgaag
    21241 tttttgcagc ataaccgcgt cgacgccatt tttctggata tcaatattcc gtcgctggat
    21301 ggcgtgttgc tggcgcaaaa catcagccag ttcgcccata aaccgtttat tgtgttcatc
    21361 accgcgtgga aagaacatgc ggtagaagcg tttgaactgg aggcgtttga ctacattctc
    21421 aaaccgtatc aggagtcacg tattaccggg atgctgcaaa aactggaagc ggcctggcaa
    21481 caacagcaga ccagcagtac gcctgccgcg acggtaacgc gtgagaatga caccattaat
    21541 ctggtgaaag atgagcgaat aatcgtcacg ccaattaacg atatctatta cgccgaagcg
    21601 cacgagaaaa tgacctttgt ctatacgcgg cgtgaatcct acgtaatgcc gatgaacatt
    21661 accgaatttt gcagcaaact gccgccgtcg cattttttcc gctgccatcg ctcattttgt
    21721 gtcaatctga acaaaatacg cgaaatcgaa ccgtggttta ataacaccta cattctgcga
    21781 ctgaaagatc tggattttga agtgccggtc agccgcagca aagtgaaaga atttcgccag
    21841 ttaatgcatc tttaatcggg aactttcatg aaagcaccag gcttgcccgc cgatcaacaa
    21901 tttttcgccg atctgttcag cggcctggtg cttaactcgc aactactggg gcgcgtctgg
    21961 tttgccagcc agcctgcctc gttaccggtg ggcagtttat gtattgattt tccccgtctg
    22021 gatatcgtgc tgcgcggcga atacggcaac ctgctggaag caaagcagca gcgaatggtg
    22081 gaaggagaaa tgctgtttat tccggcacgc gcggctaatt taccgatcaa caacaaaccg
    22141 gtgatgctgt taagcctggt gttcgcaccg acctggcttg ggttatcgtt ttacgatagc
    22201 cgcaccacgt cgttgttgca tcctgctcgc cagatccagc ttcccagcct gcaacgcggt
    22261 gaaggtgaag cgatgcttac cgccctcact catcttagcc gttcgccgct ggagcagaat
    22321 atcattcagc cactggtgtt aagtttgctg catctttgcc gcaacgtggt gaatatgccg
    22381 ccgggtaatt cgcaaccgcg cggcgatttt ctctatcaca gcatttgtaa ctgggttcag
    22441 gataattata cccagccgct cacccgcgag agcgtggcgc agttttttaa tatcacgccc
    22501 aatcatctgt caaaactgtt tgctcagcat ggaacgatgc gttttatcga gtatgtgcgt
    22561 tgggtgcgaa tggcgaaggc gaggatgatt ttgcagaaat atcatctgtc aattcatgaa
    22621 gtggcacagc gttgcggttt tccggatagc gactattttt gtcgcgtttt ccggcgtcag
    22681 tttggtctga cgccgggaga gtacagcgcc cgttttcagg gctaacgtca gaaggttaat
    22741 tctgtttcca gcagcgtcag gatactttgt gcatcttgcg cggcaaacaa cgactggcgg
    22801 aagtttttat tcaccagttt acgcgccagc tgcgagaaga ctttcacatg attcatccct
    22861 tcgttagcac ccagcgtcag catgatcacc agttcgactt cgcccatttc tgactgccag
    22921 tcaatcggtt tcgccagccg ggcaatgctg atactggaat gacggatcca ctgagatttg
    22981 gtgtgcggga tcgctacgcc aaaaccaacg ccggtggtaa caatctcttc ccgctgccag
    23041 acatcttctt ccagctcaaa cggatgttca gtgcgcccgt taacgccgag gttgccgcac
    23101 aggaactgga tcgcctgctc tttattgcta aaatcctgat caacaaagat attctccagc
    23161 gccagcagtg ggcgaacgtc ttcttccggc gtaaaggcgg tgagtaacgc ttcaatttcc
    23221 tgcgcactgc ggcattcaca tgcctgacgc gccagttccc gacacgcctc gctatccagt
    23281 tgacgaagct ggcttttcac cgccggaata cgcgggctac tcatactcag ctcatccagg
    23341 cccagcccaa gcagtagcgg cagataacgg ctttcaccgc ccagttcacc gcaaatgcct
    23401 acccatttgc cccgctgatg cgcagtggta actatttgct gcaacatgcg caggaacgat
    23461 ggcgtaatcg ggttatatag cggcgatacg cgcgggttat tacgatcgac cgcatacaga
    23521 tactgggtca tatcgttgga gccgatactg aagaaatcga cctcatcgca gaagtggtcg
    23581 atgatgtagc acaccgacgg cacttccacc atgatcccaa gcgtaatcgt ctctgcatga
    23641 cgcaggccat cgcgcttaag ctcaacgatc gctttttgga tctcgccctt cacccataag
    23701 atctgatcga gactgtggac catcgggatc atcaactggg cgttgccaaa actggcggcg
    23761 cgcaaaatcg cccgtagttg agtgcggaac aggccagcaa attccgggta aatacgtacc
    23821 gcgcgatagc cgaggaacgg gttctcttcc tggggaatat tcagataagg aatgctttta
    23881 tcgccaccga tgtccattgt gcggaagata atcggcttgt cgcccgctgc cagtagcacc
    23941 tgctggtagg cttcaaattg ctcctgctcg tccggcgcgc tgtcgcgatc catatagagc
    24001 atttcagtac ggaacagtcc aacgccttcc gcgccgttgg caaacgcgcc tggcgcttcc
    24061 agagcggtgc cgatattcgc cgcaatatca atacgcttgt tatcacggga ataggccagc
    24121 tgcgcggcgg cctgcgcctg ttgtttttgg cgtttatccg ccagcgtctg tgcgacctga
    24181 taataaccgc tcaccgcgtc attcgggtta atcgccagca cgccgcactg ggcgtcaagc
    24241 accgccggtt gcccggcata acgggcaatc gcatccagcg gcaggccgct cagtaccggg
    24301 atcgccgagg cgcgggccag aatcagggta tgcgaggtgc gcccagtttt ctccagaatc
    24361 atgcctgcaa gattttttaa atcgaggctc aaaaactggc ttggggttaa atcctcggct
    24421 accagaatag tcggtttttc cagcaccaga ttgttgcgcg gcttcagttc cggccaggtg
    24481 atatgcagca actgttcgct aatatcgcga atgtcgctaa cacgttcgcg cagataatca
    24541 ctggcagaag cagaaagttt ggcgcaaacc tgctccatat tgctgatgat cgccgccccc
    24601 agcccttgat gctgttctgt catcagacga cggatattgc ccgcgaattc atcatcctga
    24661 atcagcgaca aatgggcgct aaggatagtt ttgctttcgc cgtcactctc acgcaattgc
    24721 tggttcagtt gctcggcaag cgttgcaagg ctgtgctcca gccgggtgga atcttgcgca
    24781 ctggcgggga ttgcccgata actgtcgagg ctgtcgcttt gtaacagggt cagcgtaccc
    24841 acgccgacgc tgcttgccag cacattgccg tacagtaaat ccgggttcag gcggcttaat
    24901 gaacgcggca gcggatgcgc cgtcagttct gcctgcgttg gctggatgct gtcgctgtcg
    24961 ataaagcgca cctggatgta ctcttccaac acgcgctgcg cctgctcttc atcgctgccg
    25021 ctaatgttca ggctgcaact gtcattaaat aaagtaccgg tgccaatcag cgccagcgag
    25081 cttttcgcat cggcctttgc gttctggcga tggttgataa aggtgatttc gctttgccac
    25141 tggctgcact gttctttaag ttcccacgcc ggacgagcat gaagaccgtt tggcaaagga
    25201 cagagaaatt gaatcgttaa cataaccgct ccgggttaat caggagatca tctgaaatcc
    25261 gtcagttgaa caaccgtctc acgcgtaaga cgtttaataa gggcagataa aagctgctgc
    25321 atctgcaaaa tgtcacggca atcggcaatc gatgcggcgc aatgtccgtg gcgggttgct
    25381 ggccccatca ccactgtagg cacgccggtg ccggttaagt gcaccgctcc gccgtccgtg
    25441 ccgccgttgc tgaacatatc tgcctgtaac ggcacgccaa tttctgccgc cacggtttcg
    25501 atccacgcgg taagttttgg cggcgcaatc agcgacttgt cgcttaacac cagcatcggc
    25561 ccgttacaaa tctgacgatg gttagccgcg ccataatcaa agtttttcgc ccagcaggcg
    25621 gtatcaagca caatggcgac atccggcgac accgcgcggg tggcagtttg cccgccgcgt
    25681 acccccacct cttcgctgga actggccacc agccacactt ccgcaggcag ttcagcgctg
    25741 tgtagttcgc gcagtaacgt caccagcagg tagcaaccga ggcggtcatc aaaggctttc
    25801 cccatcaccc gctggtgagg gagaacctga aaagttgtat caaaggtgac gcgatcgcct
    25861 ggacgaattc ccgcctgcat cacttcgtca tacgagcgcg taccaatgtc cacgcgcatg
    25921 gcgctgacgt cattcccctg ccggtcgccg tcaagcaggc ctggaatttt gcactcttca
    25981 cgggtggtga tgcgcaccgg ctgcagctgg cgggcagcca tgcgcacgtt gccaaccggc
    26041 agcacatcaa ttgccccttc gcgggagatg ctgcgcacca taaatcccac ttcgtccata
    26101 tgggcgcaga tcatcacctt cggccctgtc gattcattga ggcggatcag caccgatccc
    26161 agaccatcaa atcgcacttc tttttgcagg cgatccgctt cttccagcag gatctgccgc
    26221 acttcctgtt ccgaggaggc gatcgcatct gcctcgctca acgcttttaa tagcgataaa
    26281 tccattatgc ctctcccgtg agcaacactg ttttcggcat ggcgtagagc acttctgcgc
    26341 cttgcggggt aaccagcaca acatcttcga tgcgcacgcc cccttgccct ggcaaataaa
    26401 tccccggctc cacggtcagc aacatgcctg gctgtagcgt cgtggtgtcc cgcggtgaaa
    26461 aacgcggatc ttcatggact tcaatgccga tagcgtgacc agtgttatga ccgaaatagt
    26521 cgccaaatcc agcctcggta atgacccggc gcgcggcgtc gtcaatctgc tggcagcgca
    26581 cgccggggcg aattgcagag attgccgcga gctgtgcctg caggacaatc tgatagacgt
    26641 caaacagcgg gtgagattcg gcgctcaccc cttcgccatt caccagcaag gtgcgcgtca
    26701 tatcagagca gtagccctga tacagcgcac caaaatcgag agtgacaaac tcgcccgctg
    26761 caacaatctt gtcgctggct ttgccgtgcg gcagcacccc gcgccagccg ctggcgacaa
    26821 tggtgtcaaa agaggctttt tctgcgccct gctggcgcat aaaccactcc agttcagcgg
    26881 ctatctcgcg ctcgctcatc cccgcctgaa taaagcggcg aatatgctcc gctccgcgat
    26941 cggcaatccc acaggcgagg cggattatct ccacctcctc tggcgttttg atttgccgca
    27001 gcacatccgg cgtggcgcta accagtttcg cattgagttc agacttccag cggtgcgcgg
    27061 tttcccaact cacctgctgg ccttcaaaac cgagcgtttg caactgctca tcggcaatga
    27121 tttgattgac gatagtggta agcgtgttcg tcgcgtcaag caaatgcagc tggtagcctt
    27181 gcgcacgggc ttccacctca acgaaatagc tcgaatctac cagaatgtgc gcactttcac
    27241 ggctaataac cacatagcct gatccggtgg agatccccag atgcggctgt ttgttctgcc
    27301 gtgaggagag aagcactgca tccagttgtt gctccttaag ccagtcgcgc agcgaagcga
    27361 gtaatgtcat ctggattttc cttcttacag gctatcgatt aacaatttgc ctttacggaa
    27421 catcatcaga cgcaggaaca ccaccatcag cgcagttatg actgccccca gcgcgatccc
    27481 cgccatatag acgccaaggt tagtgaccag cggccatgcc cagatagcgg attccgggaa
    27541 ccattgcact gcgcccagcc agacagcggc ggttgagccg acaatcgcgc cgaccatata
    27601 cgacggaatg gcggtgatgg ggctttccag cgcaaacgga atcgcaccct cactaatccc
    27661 cataaaggca aggaacatcg cggtcttacc ctgcggataa agttgagcgt tgaacaggcg
    27721 tttgccggtt aaacgacggt caataatggt cgccagcccc agaccaatcg gaggaataac
    27781 gatagcgata gaacgagcgg tgaccggtaa tacgtggtca gtggtaaagc tgaaggcaac
    27841 gaaacctgcg gctttgttga tcgggccacc aaggtcgatt gctgtcgccg cggcgatccc
    27901 cattgcgtac atcagcgcgc ccttctcacc tgcggcagtc agcacggtac ggataacgcc
    27961 gttgatccag ccgccaaagg gggtaatgac gtagtacatc gccagcatga caaaaatggc
    28021 ggaaagaatc ggtagcaaaa atgtggtttt gaacgctaac aggaaatccg gtaactggat
    28081 tttctggttc atccacttca caaggtaacc cgcgacgata gaaataatca gcgcaccaat
    28141 gaaggtggac ggcaccggcg aagaggtcgc ccattgcata gtgctgggat cgaagttcag
    28201 cagttgcgtc ggctgggtag acatcaagcc gccgataaaa ccagccggga acgccagttt
    28261 gccaccgata gagttcgcca caaaagcagc aaacatcgga atggcaaaac caaacaacac
    28321 gccgccgaag gactgcgaca gccaggcaaa tttcagtaag gagaggtcga aaccggagaa
    28381 tttcccgcta ttaagagcat ccatgatgcc gatctcagca ggaattttaa gccagctata
    28441 agcaatcagc tggctgaaag cgaggatcac accgcccata attaaggtcg gcaccatgcg
    28501 tgaaatccct gacatcacat gctgcgggag ttcaccccag aagctgcttt tagaggcctg
    28561 cggattctta actgccgctg ccgcaccgga tgcgccaggc acaacggttg cactgcgttt
    28621 tttaatggcc ataacaatta tccctgtcga atattactgt tgttcagagg caatcatctc
    28681 ttcgatttct ttgatgatgc ccgcagcgtt tttaattgcg tcctgcaaag tgatttcata
    28741 aacgtcgcgt gattcgaaac gctcattatc ttccggggta actgccacgg agtggatgat
    28801 gatggttgct tcggcgatat cctgcgccgt caggcgattc tggataccgt ccgcgccctg
    28861 ggtttcaatt ttcacttcat aaccggcttc taccgccgct tcttccaacg cctgagcggc
    28921 cataaaggtg tgagccaggc ccattgggca ggcacataag gcaatcagtt tcttactcat
    28981 cgttaattcc tcattcagtg atagttgaca agtgaaatta tgaacgtgca aaacaaatcg
    29041 ccgttaccag acaaataatg catttactgg agaattaatc ccgctgtacg gaagtgtgac
    29101 gcaggtcggc cttgtgaggg gacacaaaga aaaattgaat taactgtatg atttaaacga
    29161 ttatcgggag agttacctcc cgatataaca ggaaggattt acagaatgtg ccctaaggtc
    29221 tggcgtaaat gtgcaccgga accgagaaga cccggattgt catggacgat gagatacacc
    29281 ggaatatcat ggacatattc tttaaagcgc cctttatctt caaatgcagc acggaaacca
    29341 gaggctttga agaactcaag gaagcgcggc acgataccgc ccgcaataaa cacgccgcca
    29401 aatgtcccga gattgagcgc cagattgccg ccaaaacggc ccataatgac gcaaaacagc
    29461 gacaacgcgc ggcggcaatc ggtacagctg tcagccagcg cgcgttcggt aatatctttt
    29521 ggcttgagat tttctggcag gcggttgtca gctttcacaa ttgcgcgata caaattcacc
    29581 agcccagggc cagaaagcac gcgctccgcc gaaacatgac caatttccgc acgcaatatt
    29641 tcgaggataa tggcctcttc ttcactattc ggcgcaaaat caacgtgacc gccttcgccc
    29701 ggcaagctta cccaacgctt atcgacatgg accagatgcg caaccccaag ccctgttccg
    29761 gcaccgtaaa ccgcaatagg tttaccttct accggttctg cgccaccaaa ctgaatcaga
    29821 tgctcttttt tcagcatcgg gatcgccatc gatacagcgg taaaatcgtt aataatttcc
    29881 agatggctaa aaccgagatt ctttttcatt tcggcaattg agaacgccca ggtatggttg
    29941 gtcattgcca cccagtcacc ggtaattggg caagcgatgg caatacagcc gtctttcacc
    30001 tcgaccttat gttcttcaag ataaacgcga atgaccgctt cgaggctggg gtaatcaagc
    30061 cctgaatagg tcttagcctg cgagatttca ccactggcaa tatcacacag agcaagacgt
    30121 gcgttggtgc cgcccacatc accgactaat gcatacttta tcattcttca actgctccgc
    30181 taaagtcaaa ataattcttt ctcacactgt aaatacctgg gggcataaca acaacgccgg
    30241 aaaggcaggc tccctgtaaa tatcgatctg ggtcacacat ttactttatc gtttcagcac
    30301 caattgcagc gatgcctttt tgcaagctgg gcaaactaag tatctgaccc cgcataagga
    30361 atagaacatg ctccatccgc gagccagaac catgttgtta ttatcgctcc ccgccgtggc
    30421 aattgggatt gcgtccagtc ttattctgat tgtggtgatg aaaatcgcct cggtattaca
    30481 gaatttgctc tggcaacgac tgccgggaac tctggggata gcccaggatt cacctctctg
    30541 gatcatcggt gtattaacgc taacgggtat tgcggtgggg ttggttatcc gtttcagcca
    30601 gggtcatgcc ggaccagacc ccgcctgtga accgctgatc ggcgcaccag ttccgccctc
    30661 tgcgctacca ggacttatcg tagcattaat tctcggtctt gctggcggcg tcagcctggg
    30721 gccggaacat ccgatcatga ccatcaatat cgcccttgcc gtcgccattg gcgctcgtct
    30781 gttaccgcgc gtcaaccgaa tggagtggac tattttagcc tctgccggaa ccatcggcgc
    30841 gctgtttggc acacctgttg cagcggcgtt gatattttcg caaaccttaa atggcagtag
    30901 tgaagttccg ctatgggatc gtctctttgc gccgttaatg gcggcagcag ctggtgcact
    30961 aactaccgga ttatttttcc atccccattt ttcactgccc attgcgcatt acggacagat
    31021 ggaaatgacc gatattctca gcggtgcaat tgtcgcggcg attgccatcg cagcagggat
    31081 ggtcgccgta tggtgcttac cacggttgca cgcgatgatg aatcaaatga aaaatccggt
    31141 gctcgtgctg ggtattggcg gatttattct cggtattctg ggggttattg gtggaccagt
    31201 ttcgctgttt aaagggctgg atgagatgca gcagatggtg gcaaatcagg ctttcagcac
    31261 cagcgattac tttttgctgg cggtaattaa acttgccgcc ctggtcgttg ctgccgccag
    31321 tggctttcgc ggtgggcgaa tcttcccggc agtgtttgtc ggcgtggcat tagggttgat
    31381 gctgcatgag cacgtacccg ccgtaccagc ggcaataacc gtttcttgcg ctattctcgg
    31441 catcgtgctg gtggtaacac gcgatggctg gttaagtctt tttatggcgg cggtcgttgt
    31501 acccaatacc acattgctac cgctgctctg tatcgtcatg cttccggcat ggctgttatt
    31561 agcaggtaag ccgatgatga tggtcaatcg tccgaagcaa cagccacccc acgataacgt
    31621 ttagcaaaaa atgctctcct ttatgattta agagttatgg cgatgatacg gggctttacc
    31681 tccccgtaat attgcgttaa caggccgctg acggcttcga tcgtgaagga gaataacaat
    31741 gttcaggtca ctgtttctgg cggccgccct gatggcattt accccgcttg cagcaaacgc
    31801 aggtgaaatc accctactgc catcaatcaa attacaaatt ggcgatcgcg atcattacgg
    31861 taattactgg gacggtggtc actggcgcga ccgtgactac tggcatcgca attatgagtg
    31921 gcgcaaaaac cgttggtggc gtcatgataa tggctatcat cgtggctggg ataagcgtaa
    31981 agcgtatgag cgtggctatc gtgaaggctg gcgcgatcgt gacgatcatc gcggaaaagg
    32041 ccgcggacat ggacaccgcc attaaacaca ttcgccaatg gagcacaatg cctgatgcga
    32101 cgctagcgcg tcttatcagg cctacaaacc ggatctttaa cgcgtagggc ggataaggcg
    32161 tttacgccgc atccgccaat agtgccagat gcgacgctca ttcaactaca atcccagcgc
    32221 cgtccccacc aacaaccaga tattcagcgc cacgaccagc actacaatca cccagcctgt
    32281 ctgttttacg cgtttgctgt tcaccagatc gcccatcaac ttgctgtcac tggtgaaaat
    32341 cagcagtgga accagcgcca gggcgatacc aaaacttaac agcacctgac tcataaccag
    32401 aatccgtgtc ggatctaatc ccatcagaat gacaataaat gacggcagca tggtgactgt
    32461 acgacgcacc cacagcggga tatggaagcg aatgaacccc tgcatcacca cctgccctgc
    32521 cagtgtcccc actaccgttg aggacagtcc ggcagcaacc agacttaacc caaagaccgt
    32581 tgccgcagca tggcttaaca gcggttgcag cgtcagataa gcctcatcaa gatcggcaac
    32641 accagtatga ccagaaaagt ggaacgccgc cgcagctgta gccatcatcg ccagattgac
    32701 aaaaccggca atagtcatgg cgatagccac atcccatttg gtggcggaat aacgttgttg
    32761 acgcgaaccg ccatgtaaat gctgagtgag cgaggagtgc aaataaatca catgcggcat
    32821 aatcgtcgcc cctaacacgc ctgctgccag gaagaccgct tccgaagtag gtaaactcgg
    32881 gatcaccatt cctttaccca gctgcgccag gttaggctgg gagaaaatca actcgacaat
    32941 gtaagccgcg gcaacaaaca acagtaaccc gccaatcact ttctccagcg gtttttgccc
    33001 gcgacgttgc agcattaaaa tcaggaaagt cgcgatcccc gtcagcaccg cgccctgcaa
    33061 caacgaaaca ccaagaatga gtttaaaacc gatcgccgca ccaataaatt ccgccaggtc
    33121 ggttgccatc gcaataattt ctgcctgaac ccaatagaac cacactacgg gacgcggata
    33181 gtgatcgcga atctgctccg ccagattttt accggtggca atccctagtt tggcagagag
    33241 gatctgaatc agcatcgcca tcaggttggc ccaaacgaca acccacagta gctgatagcc
    33301 gaagctggca cccgcctgaa tattggtcgc aaagttaccg ggatcgatat aaccaatcgc
    33361 cgcaatgaac gcaggtccca ttaatgcgag cctcatcttg cgcgccgccc gtccgctgct
    33421 actctcaacg cgatagttcg tcatcttgtg cctctaaaac atagcctttg ctatgtttca
    33481 tgctatgata aacgagaatg attatcaaat tcatttaaat ggattgtggt gatttctgtg
    33541 atagaccagg attatgacta cgaaaagatt gatgacttga atgttatggt tatgtttaat
    33601 gttagcacat ttacataact ttcagcttcc atacacaaca tagcagaaat gtatgacaga
    33661 tcactatttt tgaagcctgt cacaggacgt cattatagtg tgtgtcagat ctcgttttcc
    33721 ttaaccatgt tacatagaat gtgcacggaa atttaacctg cctcatattt ggagcaaata
    33781 tggaccgcgt ccttcatttt gtactggcac ttgccgttgt tgcgattctc gcactgctgg
    33841 taagcagcga ccgcaaaaaa attcgtatcc gttatgttat tcaactgctt gttatcgaag
    33901 tgttactggc gtggttcttc ctgaactccg acgttggttt aggcttcgtg aaaggcttct
    33961 ccgaaatgtt cgaaaaactg ctcggatttg ccaacgaagg gactaacttc gtctttggta
    34021 gcatgaatga tcaaggcctg gcattcttct tcctgaaagt gctgtgccca atcgtcttta
    34081 tctctgcact gatcggtatt ctccagcaca ttcgcgtgtt gccggtgatc atccgcgcaa
    34141 ttggtttcct gctctccaaa gtcaacggca tgggcaaact ggaatccttt aacgccgtca
    34201 gctccctgat tctgggtcag tctgaaaact ttattgccta taaagatatc ctcggcaaaa
    34261 tctcccgtaa tcgtatgtac accatggctg ccacggcaat gtccaccgtg tcgatgtcca
    34321 tcgttggtgc atacatgacc atgctggaac cgaaatacgt cgttgctgcg ctggtattga
    34381 acatgttcag cacctttatc gtgctgtcgc tgatcaaccc ttaccgtgtt gatgccagtg
    34441 aagaaaacat tcagatgtcc aacctgcacg aaggtcagag cttcttcgaa atgctgggtg
    34501 aatacattct ggcaggtttc aaagttgcca ttatcgttgc cgcgatgctg atcggcttta
    34561 tcgccctgat cgctgcgctg aacgcactgt ttgccaccgt gactggctgg tttggctaca
    34621 gcatctcctt ccagggcatt ctgggctaca tcttctatcc gattgcatgg gtgatgggtg
    34681 ttccttccag tgaagcactg caagtgggca gtatcatggc gaccaaactg gtttccaacg
    34741 agttcgttgc gatgatggat ctgcagaaaa ttgcttccac gctctctccg cgtgctgaag
    34801 gcatcatctc tgtgttcctg gtttccttcg ctaacttctc ttcaatcggg attatcgcag
    34861 gtgcagttaa aggcctgaat gaagagcaag gtaacgtggt ttctcgcttc ggtctgaaac
    34921 tggtttacgg ctctaccctg gtgagtgtgc tgtctgcgtc aatcgcagca ctggtgctgt
    34981 aagaccatac ataaaaaagc cggggataat tcc
//
LOCUS       DAJVUK010000025        34319 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.025, whole genome shotgun sequence.
ACCESSION   DAJVUK010000025 DAJVUK010000000
VERSION     DAJVUK010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34319
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.025"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..688)
                     /gene="istA"
                     /locus_tag="OQQ57_001150"
     CDS             complement(<1..688)
                     /gene="istA"
                     /locus_tag="OQQ57_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element IS100 family transposase"
                     /protein_id="HCS1955982.1"
                     /translation="MVTFETVMEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEP
                     PKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIR
                     SLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNMR
                     YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFS
                     PRLCRPFRAQT"
     gene            2042..2821
                     /gene="ipaJ"
                     /locus_tag="OQQ57_001151"
     CDS             2042..2821
                     /gene="ipaJ"
                     /locus_tag="OQQ57_001151"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     protease IpaJ"
                     /protein_id="HCS1955983.1"
                     /translation="MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNE
                     NRVNEQGCFLARKQMYDNSCGAASLLCAAKELGVDKIPQYKGSMSEMTRKSSLDLDNR
                     CERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATRLLGLNAYVVEESNIFSQVIS
                     FIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLCRPDGSYMD
                     PAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL"
     gene            complement(3766..4695)
                     /gene="virB"
                     /locus_tag="OQQ57_001152"
     CDS             complement(3766..4695)
                     /gene="virB"
                     /locus_tag="OQQ57_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence regulon transcriptional activator
                     VirB"
                     /protein_id="HCS1955984.1"
                     /translation="MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTF
                     VNQKTNVRDQESLTEESLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAG
                     ADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENL
                     SRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILK
                     EEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTN
                     RTLIFTLSKINKTVQREIDEAIRDIISRHLSSS"
     gene            complement(4912..5148)
                     /locus_tag="OQQ57_001153"
     CDS             complement(4912..5148)
                     /locus_tag="OQQ57_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCS1955985.1"
                     /translation="MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDM
                     ISFEFNLRIDESALEHIITIGDLISVVKNSTKSI"
     gene            complement(5152..7053)
                     /gene="ipaA"
                     /locus_tag="OQQ57_001154"
     CDS             complement(5152..7053)
                     /gene="ipaA"
                     /locus_tag="OQQ57_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector invasin IpaA"
                     /protein_id="HCS1955986.1"
                     /translation="MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTP
                     ASVSEKENFATSFNQKCLDFLFSSSGKEDVLRSIYSNSMNAYAKSEILEFSNVLYSLV
                     HQNDLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPWSAKNKKLHQLRQNIEHRLAL
                     LAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLVDAQAKLAF
                     DSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPT
                     PPEDMPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQS
                     PTSQTNDLLSRNGNSLLNPQRALVQKVTSVLPHSISDTVQTFANNSALEKVFNHTPDN
                     SDGIGSDLLTTSSQERSTNNSLSRGHRPLNIQNSSTTPPLHPEGVTSSNDNSSDTTKS
                     SASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRETIFEASKKVTNSLSNLIS
                     LIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDANTINYVTETNADTIDKNHAI
                     YEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNDITAENNNIYKAAKDVTTSLS
                     KVLKNINKD"
     gene            complement(7062..8060)
                     /gene="ipaD"
                     /locus_tag="OQQ57_001155"
     CDS             complement(7062..8060)
                     /gene="ipaD"
                     /locus_tag="OQQ57_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle tip complex
                     protein IpaD"
                     /protein_id="HCS1955987.1"
                     /translation="MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSL
                     TMLNDTLHNIRTTNQALKKDLSQKTLTKTSLEEIALHSSQISMDVNKSAQLLDILSKK
                     EYPINKDARELLHSAPKEAELDGYEMISHRELWDKIAKSINNINEQYLKVYEHAVSSY
                     TQMYQDFSAVLSSLAGWISPGGNDGNSVKLQVKSLKDELTKLKEKYKDKPLYPANNTV
                     SKEQANKWLTELGGTIGKVSEKNGGYVVNINMTPIDNMLKSLDNLGGNGEVVLDNAKY
                     QAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF"
     gene            complement(8111..9202)
                     /gene="ipaC"
                     /locus_tag="OQQ57_001156"
     CDS             complement(8111..9202)
                     /gene="ipaC"
                     /locus_tag="OQQ57_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS translocon subunit IpaC"
                     /protein_id="HCS1955988.1"
                     /translation="MEIQNTKSAPILYTDISTKQTQSSSETQKSQNYQQLAAHIPLNV
                     GKNPVLTTTLNDDQLLKLSEQVQHDSEIIARLTDKKMKDLSEMSHTITPENTLDISSL
                     SSNAVSLIISVAVLLSALRTAETRLGSQLSLIAFDATKSAAENIVRQGLAALSSSITG
                     AVTQVGITGIGAKKTHSGISEQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP
                     QTNSSTKILGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRAYELNTLSAQQKQ
                     NIGRATMETSAVAGNISTSGGRYTSALEEEEQLISQASSKQAEEASQVSKEASQATNQ
                     LIQKLLNIIDNINQSRNSTASQIAGNIRA"
     gene            complement(9222..10964)
                     /gene="ipaB"
                     /locus_tag="OQQ57_001157"
     CDS             complement(9222..10964)
                     /gene="ipaB"
                     /locus_tag="OQQ57_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocon subunit
                     IpaB"
                     /protein_id="HCS1955989.1"
                     /translation="MHNVSTTTTGLPLAKILASTELGDNTIQAANDAANKLFSLTIAD
                     LAANKNINTTNAHSTSNILIPELKAPKSLNASSQLTLLIGNLIQILGEKSLTALTNKI
                     TAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ
                     IQTRLSELAPDSPENKKLRREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLE
                     KEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQ
                     SLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASL
                     ALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVD
                     SKKAKMIGSILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFL
                     KNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLNQAVLLGESVNSATQAGGN
                     VASAVFQNNASKNLADLTLSKYQVEQLSKYIGDAIEKFGQLQEVIAELLASMSNSQAN
                     RTDVAKAILQQTTA"
     gene            complement(10970..11437)
                     /gene="ipgC"
                     /locus_tag="OQQ57_001158"
     CDS             complement(10970..11437)
                     /gene="ipgC"
                     /locus_tag="OQQ57_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SycD/LcrH family type III secretion system
                     chaperone IpgC"
                     /protein_id="HCS1955990.1"
                     /translation="MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAY
                     DFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN
                     DYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIKE"
     gene            complement(11495..12121)
                     /gene="ipgB1"
                     /locus_tag="OQQ57_001159"
     CDS             complement(11495..12121)
                     /gene="ipgB1"
                     /locus_tag="OQQ57_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion effector IpgB1"
                     /protein_id="HCS1955991.1"
                     /translation="MQILNKILPQVEFAIPRPSFDSLSHNKLVKKILSVFNLKQRFPQ
                     KNFGCPVNINKIRDSVIDKIKDSNSGNQLFCWMSQERTSYVSSMINRSIDEMAIHNGV
                     VLTSDNKKNIFAAIEKKFPDIKLDEKSAQTSISHTALNEIASSGLRAKILKRYSSDMD
                     LFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN"
     gene            complement(12137..12526)
                     /gene="ipgA"
                     /locus_tag="OQQ57_001160"
     CDS             complement(12137..12526)
                     /gene="ipgA"
                     /locus_tag="OQQ57_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgA"
                     /protein_id="HCS1955992.1"
                     /translation="MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYI
                     FLTGLLNEHELFTENIINPEHILILNYSLSRDYGSSICLLPDTHQCVLTKKHYKKYLS
                     PDELIESLYEFLFCIKLTIANITSEVN"
     gene            complement(12539..14023)
                     /gene="icsB"
                     /locus_tag="OQQ57_001161"
     CDS             complement(12539..14023)
                     /gene="icsB"
                     /locus_tag="OQQ57_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector IcsB"
                     /protein_id="HCS1955993.1"
                     /translation="MILKISNFIDASNTKGPIRVEDTEHGPILVAQKFNLKDLFFRTL
                     STINAKINSQILNEQLKNYRLANQKSLLLFLKTLASEKSAESAFAAYEAVKNSIQHSF
                     TGKDIKLMLNTAESFHGIGTAKNLERHLVFRCWGNRGITHLGHTSISIKNNLLQEPTH
                     TYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDAGQEVRNLL
                     NSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISYNLFGLDE
                     TNMSKFICQKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATP
                     NNVYAYANKVRQRIESLNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPK
                     TFKPLSISLYKHPTENVSSEDFDAVINACHSYLVKSAPSNMSRVLNELKTGATDKKEV
                     IIEKSIKTIDYYNSLKSPDLGTKLYIHDLLQVNKLLLNNSHSNI"
     gene            14337..15953
                     /locus_tag="OQQ57_001162"
     CDS             14337..15953
                     /locus_tag="OQQ57_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector inositol
                     phosphate phosphatase"
                     /protein_id="HCS1955994.1"
                     /translation="MHITNLGLHQVSFQSGDSYKGAEETGNQKGVSVISYQRVKNGER
                     NKGVEALNRLYLQNQTSLTGKGLLFARDRAAVFYEAIKLAGGDTSKIKAMMEQLDTYK
                     LGEVDKRNINELNKVISEEIRAQLGIKNKKELQSEIKQIFTNYLNNKNWEPINKNINY
                     NGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESKHIANMWLSKVVDDEGKE
                     IFSGIRHGVISAYGLKKNSSERAVAARNKAEELASAALYSRQELLSQALSGKTVDLKI
                     VSTSLLTPTSLTGGEESMLKDQVKALKELNSKRGEPTKLLIRNSDGLLQEVKVNLKVV
                     TFNFGVNELALKMGLGWRNVDKLNGESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKN
                     DVIYLANQIKEILNKKLQKNDNGEPYKLSQRMALLAYTIGAVPCWNCKSGKDRTGMQD
                     AEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGNMEIQEMNTGVPGNKVMKK
                     LPLSSLELSYAERIGDPKIWNMVKGYSSFV"
     gene            15963..16325
                     /gene="ipgE"
                     /locus_tag="OQQ57_001163"
     CDS             15963..16325
                     /gene="ipgE"
                     /locus_tag="OQQ57_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgE"
                     /protein_id="HCS1955995.1"
                     /translation="MEDLADVICRALGIPSIDTDDQAIMLDDDVLIYIEKEGDSINLL
                     CPFCALPENINDLIYALSLNYSEKICLATDDEGGSLIARLDLTGINEFEDIYVNTEYY
                     ISRVRWLKDEFARRMKGY"
     gene            16325..16783
                     /gene="ipgF"
                     /locus_tag="OQQ57_001164"
     CDS             16325..16783
                     /gene="ipgF"
                     /locus_tag="OQQ57_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system lytic transglycosylase
                     IpgF"
                     /protein_id="HCS1955996.1"
                     /translation="MSRFVFIFLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESG
                     FNKFAVNVNNNGSKDYGIMQINDFHSKRLREMGYTEEMLISHPCLSVHYAAKLLNEFM
                     LMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI"
     gene            16792..17907
                     /gene="mxiG"
                     /locus_tag="OQQ57_001165"
     CDS             16792..17907
                     /gene="mxiG"
                     /locus_tag="OQQ57_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiG"
                     /protein_id="HCS1955997.1"
                     /translation="MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETL
                     EFGNDNFPENIIPVTDSKSDGIIYLAISKDNICQFSDEKGEQIDINSQFNSFEYDGVS
                     FQLKNMMEDKSRVHILNGMYNKPSVFFFFAVIVVLIIIFSLSLKKDEVKEIAEIIDDK
                     RYGIVNTGQCNYILAETQNDAVWASVALNKSGFTKCRYILVSNKEINRIQQYINQRFP
                     YINLYVLNLVSDKAELLVFLSKERNSSKDTELEKLKNALIVEFPYIKNIKFNYLSDHN
                     AREDAKGIFTKVNVQYKEICETNKVTYSVREELTDEKLELINRLISDHKNVYGDQYIE
                     FSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFFLDKNK"
     gene            17915..18166
                     /locus_tag="OQQ57_001166"
     CDS             17915..18166
                     /locus_tag="OQQ57_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscF/YscF/HrpA family type III secretion system
                     needle major subunit"
                     /protein_id="HCS1955998.1"
                     /translation="MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNP
                     QLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR"
     gene            18179..18472
                     /gene="mxiI"
                     /locus_tag="OQQ57_001167"
     CDS             18179..18472
                     /gene="mxiI"
                     /locus_tag="OQQ57_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     MxiI"
                     /protein_id="HCS1955999.1"
                     /translation="MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQ
                     VSQIMEMVSHPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS"
     gene            18478..19203
                     /gene="mxiJ"
                     /locus_tag="OQQ57_001168"
     CDS             18478..19203
                     /gene="mxiJ"
                     /locus_tag="OQQ57_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctJ family type III secretion inner membrane
                     ring lipoprotein Mxi"
                     /protein_id="HCS1956000.1"
                     /translation="MIRYKCFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHN
                     ITARKVDGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPRAE
                     KARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVIAIYDSPKESE
                     LLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEIKSEFLTNEVIYVFLG
                     MAVLVVILLVWAFKTGGFKRNKI"
     gene            19200..19727
                     /locus_tag="OQQ57_001169"
     CDS             19200..19727
                     /locus_tag="OQQ57_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion apparatus protein OrgA/MxiK"
                     /protein_id="HCS1956001.1"
                     /translation="MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEIN
                     NLIINKYDLNCDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGK
                     ISKQGEAAIRSGFWHLIEWKENISVGIYERINLLFNPIALEGNYTPVERNLSRLNEGM
                     QYAKRHFTGIQTSCL"
     gene            19669..20364
                     /gene="mxiN"
                     /locus_tag="OQQ57_001170"
     CDS             19669..20364
                     /gene="mxiN"
                     /locus_tag="OQQ57_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mxi-Spa type III secretion system linker protein
                     MxiN"
                     /protein_id="HCS1956002.1"
                     /translation="MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKK
                     KAICVIKDATKKAESLRIDAVCDGYQIGIQTAFEHIIDYICEWKLKQNENRRNIEDYI
                     TSLLSENLHDERIISTLLEQWLSSLRNTVTELKVVLPKCNLALRKKLELDLHKYRSDV
                     KIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKELAHKKLRQ
                     IAEDLLKENPVND"
     gene            20357..20764
                     /gene="mxiM"
                     /locus_tag="OQQ57_001171"
     CDS             20357..20764
                     /gene="mxiM"
                     /locus_tag="OQQ57_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000609865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiM"
                     /protein_id="HCS1956003.1"
                     /translation="MINQINASNALQQRLNSEEFVNLNERLSSSQSFDENIIYEIMQY
                     FSQSELNSIDNDELHNKIEQLFNSRFPYLTAAQKSSLLNKLIDANQYVDLHEGFYASL
                     SIYNNIDFYIKTTTFDSLISVFEAGREADDSTW"
     gene            20748..21176
                     /gene="mxiM"
                     /locus_tag="OQQ57_001172"
     CDS             20748..21176
                     /gene="mxiM"
                     /locus_tag="OQQ57_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system pilotin MxiM"
                     /protein_id="HCS1956004.1"
                     /translation="MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKD
                     YFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKI
                     AIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI"
     gene            21306..21938
                     /gene="mxiE"
                     /locus_tag="OQQ57_001173"
     CDS             21306..21938
                     /gene="mxiE"
                     /locus_tag="OQQ57_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system transcriptional
                     activator MxiE"
                     /protein_id="HCS1956005.1"
                     /translation="MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALV
                     EHSHAEKCIHFYHENDLRDSCNTESMLDKLMLRFIFSSDQNVSNALAMIRMTESYHLV
                     LYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALGAKVKEQLNTWRLVNGLLDVF
                     LHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI"
     gene            21925..23625
                     /gene="mxiD"
                     /locus_tag="OQQ57_001174"
     CDS             21925..23625
                     /gene="mxiD"
                     /locus_tag="OQQ57_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system secretin MxiD"
                     /protein_id="HCS1956006.1"
                     /translation="MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDT
                     VGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKMTLLVGLIWYKDGNAL
                     YIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
                     LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLL
                     NNGKALSNRQAKNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSIL
                     VKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGA
                     SFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVS
                     LVGERNSSLEHVTYGTLINVIPRFSSQGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
                     EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFKYKTRNISN
                     IVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSLVSYLNY
                     "
     gene            23644..24711
                     /gene="mxiC"
                     /locus_tag="OQQ57_001175"
     CDS             23644..24711
                     /gene="mxiC"
                     /locus_tag="OQQ57_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper subunit
                     MxiC"
                     /protein_id="HCS1956007.1"
                     /translation="MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKY
                     IDSSDEMASALSSFINRRDLEKLKGTNSDSQERILDGEEDEINHKIFDLKRTLKDNLP
                     LDQDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVESLTKIINEIISGSEKSVNAG
                     INSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNHRHTIVNFV
                     EQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAE
                     QLLLTLLYIFQYPSESEQILTSVIDVSRASHEDSVVYQTYLSSVNESPHDIFKSESER
                     EIAINILRELVTSAYKKELSR"
     gene            24724..26784
                     /gene="mxiA"
                     /locus_tag="OQQ57_001176"
                     /gene_synonym="virH"
     CDS             24724..26784
                     /gene="mxiA"
                     /locus_tag="OQQ57_001176"
                     /gene_synonym="virH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein MxiA"
                     /protein_id="HCS1956008.1"
                     /translation="MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLN
                     IVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKIITTF
                     GQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQ
                     HGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFG
                     NPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYT
                     GTFDIDNSHDSSLAMIENLDAISSETVPLILLFAENKISANDMEGLIERIRSQFFIDY
                     GVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVVST
                     SYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLD
                     QFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVIT
                     LVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDE
                     VMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINV
                     LKTI"
     gene            26797..27198
                     /gene="spa15"
                     /locus_tag="OQQ57_001177"
                     /gene_synonym="spaK"
     CDS             26797..27198
                     /gene="spa15"
                     /locus_tag="OQQ57_001177"
                     /gene_synonym="spaK"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone Spa15/SpaK"
                     /protein_id="HCS1956009.1"
                     /translation="MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAIN
                     IALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSDEYLQLRV
                     VIKDDYVHDGIVFAEILHEFYQRMEILNEVL"
     gene            27202..28494
                     /gene="spaL"
                     /locus_tag="OQQ57_001178"
                     /gene_synonym="mxiB"
                     /gene_synonym="spa47"
     CDS             27202..28494
                     /gene="spaL"
                     /locus_tag="OQQ57_001178"
                     /gene_synonym="mxiB"
                     /gene_synonym="spa47"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system ATPase SpaL"
                     /protein_id="HCS1956010.1"
                     /translation="MSYIKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNE
                     IIARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEV
                     TDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFAS
                     AGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDY
                     SSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPV
                     SVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLA
                     QKGQFPAIDSLKSISRVFTQVVDEKHRIMATAFRELLSEIEELRTIIDFGEYKPGENA
                     SQDKIYNKISVVESFLKQDYRLGFTYEQTMELLGETIR"
     gene            28587..28925
                     /gene="spa13"
                     /locus_tag="OQQ57_001179"
                     /gene_synonym="spaM"
     CDS             28587..28925
                     /gene="spa13"
                     /locus_tag="OQQ57_001179"
                     /gene_synonym="spaM"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858283.1"
                     /note="Not similar to SpaM from Salmonella T3SS; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein Spa13"
                     /protein_id="HCS1956011.1"
                     /translation="MEALDKRIIYFLQLENDLEPVGAQSVSQLFNTRRKIAIVKKHII
                     QYQSERILLKGRIEEIQKDIDEANASKRKLLHKESKICKRIGLIKRNNFAKQLILDEL
                     SQEDMKYGIR"
     gene            28912..29790
                     /gene="spa32"
                     /locus_tag="OQQ57_001180"
     CDS             28912..29790
                     /gene="spa32"
                     /locus_tag="OQQ57_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle length
                     regulator Spa32"
                     /protein_id="HCS1956012.1"
                     /translation="MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEY
                     SLIASNYFTIDKHFEHKHDKGEIYSGIKNAFELRNERATYSDIPESMAIKENILIPDQ
                     DIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVNPDNLLESDNRNGQIGLKNHS
                     LSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDKNVFQKNSE
                     MTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKG
                     NKNNSTGYNEQSEEEC"
     gene            29784..30665
                     /gene="spa33"
                     /locus_tag="OQQ57_001181"
                     /gene_synonym="spaO"
     CDS             29784..30665
                     /gene="spa33"
                     /locus_tag="OQQ57_001181"
                     /gene_synonym="spaO"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctQ family type III secretion system ring
                     protein Spa33"
                     /protein_id="HCS1956013.1"
                     /translation="MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLT
                     SVCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKITF
                     RITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEFCLGSSNVRLA
                     TLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKINLSESNGESDHTEVSLAL
                     FNYDDINVKVDFILLEKKMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELV
                     SIEDGYGIEISSWMVKE"
     gene            30670..31320
                     /gene="spa24"
                     /locus_tag="OQQ57_001182"
                     /gene_synonym="spaP"
     CDS             30670..31320
                     /gene="spa24"
                     /locus_tag="OQQ57_001182"
                     /gene_synonym="spaP"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein Spa24/SpaP"
                     /protein_id="HCS1956014.1"
                     /translation="MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQ
                     QVPSNMTLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQY
                     LKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDAFKIGFYLYLP
                     FIVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA"
     gene            31335..31595
                     /gene="spaQ"
                     /locus_tag="OQQ57_001183"
     CDS             31335..31595
                     /gene="spaQ"
                     /locus_tag="OQQ57_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HCS1956015.1"
                     /translation="MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQE
                     QTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSGV"
     gene            31595..32365
                     /gene="spa29"
                     /locus_tag="OQQ57_001184"
                     /gene_synonym="spaR"
     CDS             31595..32365
                     /gene="spa29"
                     /locus_tag="OQQ57_001184"
                     /gene_synonym="spaR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858288.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein Spa29/SpaR"
                     /protein_id="HCS1956016.1"
                     /translation="MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIR
                     IPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSI
                     IDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
                     FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLT
                     IKSLLAIFIIFICSSTIYFSKVQFFLGEHKFFTNLFVR"
     gene            32372..33400
                     /gene="spa40"
                     /locus_tag="OQQ57_001185"
                     /gene_synonym="spaS"
     CDS             32372..33400
                     /gene="spa40"
                     /locus_tag="OQQ57_001185"
                     /gene_synonym="spaS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     switch protein Spa40/SpaS"
                     /protein_id="HCS1956017.1"
                     /translation="MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISF
                     FSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKF
                     VLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
                     SQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKRE
                     YIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPF
                     ISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVW
                     LEQVENTH"
     gene            33413..33655
                     /locus_tag="OQQ57_001186"
     CDS             33413..33655
                     /locus_tag="OQQ57_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956018.1"
                     /translation="MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKD
                     IINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL"
BASE COUNT        10677 a         5066 c         6902 g        11674 t
ORIGIN      
        1 tagtctgtgc cctgaagggg cgacacagtc ggggagagaa gcccatctcc ttgccgaact
       61 gccacagcga aggatggaac cggtgctgac cggtctgata tgcgtcacgt tgcagaacca
      121 cagttttcat attgtcatac aacacttcgc gcggcacacc accaaagaag cggaacgcat
      181 tacgatggca ggtctccagc gtgtcataac gcatattgtc agtgaattcg atgtacaaca
      241 ttcggctgta tccgggaaca gcaacgaaca cgtgaagcgg tgagcgacca ttacgcatag
      301 tgccccagtc aacctgcatc tgtcgtccgg gttcagtttc gaaccgaacg gcaggctcct
      361 gctcctgagg aaccgagaga gaacgaatga atgccctgag aatggtcatt ccgccacgat
      421 atccctggtc tctgatctcg cgagcgatta ccgttgccgg gattttgtaa ggatgagcat
      481 cggcgatgcg ttgacgaata taatcccggt attcatccag gagtgaagca acagcaggtc
      541 gcggcgtata ttttggcggc tcagattttg cctgcaaata acgtttaacg gtattgcggg
      601 agagccccag ttctctggca atcgcccggc tactcattcc ctgcttgtgc aggattttaa
      661 tttccataac tgtctcaaaa gtgaccataa gctctcctga atcaggagag cagattaccc
      721 cctggatctg atttcaggcg ttgggtgtgg atcactattg caccgttcgt gacacttgtt
      781 gactgcctgt gcggcatctg gtatcaaggt ggcgtgaagc cggttcaggt tctcatgcgg
      841 aacgttggaa cctatatccc cccgatacca aaggcgaaat gtaagtgaca aaatgcaatg
      901 aacacgttct ccgttaactg aggagcatgg tgataaataa aggtaaatgc agaaggtgta
      961 gagtctcgca gatttctgac atcatagagc ctaacattag atgcataacg ctacagattg
     1021 tagaatctct acaggtgaaa tatacactgg ttggcgttta tgtcgcaaaa catgtcattc
     1081 aggttcatct caccaataag gatatgagtg aagtggagga taagtgagtc tgctgtcaga
     1141 gttttctggt gtatgtcagt aactgcagaa ccatgtctgc ttgatatggg agcttatgga
     1201 ggctctctgt acaaggttag ggagctaaca aagcagggat aaaaagtccg cctgatgcag
     1261 gcacggttcg ttaaatcttt tgccattggt aacaaaatgg tgcgatgaat gttcaggcta
     1321 tctttatctt gatggtggtt cagctgtttg gtaaagaaat cgctgtaaca atagaagaac
     1381 tgcaggcagt actggtccca cattgtttgc tcagtcaact ggtgaagttc cgtagcgcgt
     1441 aaattaatgc tttgcatgaa acgttactgg agtggatgaa agaatacctg catatatcat
     1501 tactgcgttg gattaccagt acaacagatt gaatgaactg gacatgttga tagacggcat
     1561 tgaaaagcag cttataagca tagtgcggca gagttaattg gagagcactt cgccttctga
     1621 gtattaagta atcatggtgg tacctgcgga tactatctat tcactgtgct cggtcggcag
     1681 ccttactgac caaggagttg ggggagttga taacaaagtt gaaaaaacag ctctcaacca
     1741 aggtggttat tgtaacaata gcaaataagc tggtgtgacc tgtatcacaa taaccgatta
     1801 tggacgtaaa tacgacaaaa atatgtcagt atcaggcggt attaattgct gatgctgatg
     1861 gacattaact cttaataaaa gggtggatgc tgaaaggttg ttatggtgac ggacgtgatg
     1921 acgacggaaa agagtatgag gttttggatt taaagttcgt tcggggaata aggacccggt
     1981 cagctaattc tcatagtagt tcgcattgct ggatgcaata ctgtgctgca attactcgtc
     2041 gatgtcggaa caacggaagc cttgcaaacg gggatgtatt catacaggtg ttatgttata
     2101 tggggtttta ttgcaggggg ctataccaag agaatatatg atatctcatc agactgatgt
     2161 gagggtaaat gagaatagag taaacgaaca aggttgtttt ttggcgagga agcagatgta
     2221 tgacaattct tgtggagctg ccagtttact ctgtgctgca aaggaattag gggttgataa
     2281 aataccacaa tacaaagggt ctatgtccga aatgacaagg aagagttctc ttgatttgga
     2341 taatcgttgt gagcgggatt tatacttaat aactagtggt aattataatc cgagaataca
     2401 caaagataat atcgcggatg ccggttattc tatgcctgat aagatagtca tggctacgag
     2461 gcttcttgga ttgaatgctt atgtcgttga agaaagtaac attttttcgc aagtaattag
     2521 ttttatttat cccgatgcaa gggacttatt aattggcatg ggatgtaata tagtacatca
     2581 acgagatgtg ttatcttcta accaaagagt tttggaagct gttgctgtat cctttattgg
     2641 agttcctgtc ggcctccact gggtgttgtg tagacctgat ggaagctata tggatccagc
     2701 tgtaggagaa aattattctt gtttttcaac tatggaatta ggtgcaagaa gaagtaattc
     2761 taactttata ggatatacta aaataggtat ttccatagtt ataactaatg aggctttgta
     2821 aattgtcgtt ttttatctgt gaaggagctt gaatattttg gggcgggggg cataacaaat
     2881 gatattactg agtacaaatt tagctatatt gggcggatta gttgtgtggg aagacgaaat
     2941 gtttctcttg aaataagtga actccctcaa ggaatgattg tgtgcttaaa tatttaagtg
     3001 ctggtaagtt tgagaaggct gacatatttt gcagagcaaa cagtgattga cttggatgat
     3061 atttttattt tagtcactcg ttgtaattgg agtatgcttt attttatttg aaaatagatg
     3121 tattttatac ccgcaattta aattgtaagc cctatgaggg gtatggatat tataagttac
     3181 tctttgacta agcataactt ttggggttag aaaaataaat ctcttgttaa taattaatat
     3241 gattttaaaa tcaaacttgt ttataattat aaaataatgt aagtcggtca ttttatggga
     3301 agattaggag aataaaacag taattatatt tgagaaatct gctaatatat tcttaaagct
     3361 tttttgatac tgtgaacgaa gtctgttaat ggtggatttt ttgtttatca ccatgtaaaa
     3421 aaattgagta gtaaaagcgt tgactgctaa tcctcgctgt ttttattgaa acgattaaaa
     3481 atacgctgaa tattttcggc cagtcactca tcttcacata aaattttgac catcatgccg
     3541 catcccttag ttgcacaatt cattttcaat gatatgaata ttactaattt caccagataa
     3601 tgttctcgtg gtcagcaggg tatgagtttt caccgtaatt ttaaggaaac acagtgcgtg
     3661 gggattgaat aacagatagc cgacggaatt accccaccgg ctgaaagtca agttcaacga
     3721 agatttttat tatctgaatt gggcagttta catcagtgtt cgagtttatg aagacgatag
     3781 atggcgagaa attatatctc gaatagcttc atctatttct ctctgaactg ttttgtttat
     3841 tttagataat gtaaatatta gagttctgtt tgttttattc tcttttcttt ttatgtaagt
     3901 ccgtttgtct ttagaaataa ataacgagtc aacttttagc gaagggtttt gctttctgtt
     3961 tttgcttttc tttatgatgt ttaaaatttc ttttttatat atgtccgggg gcaaatttgt
     4021 atcaaggtct tttatttctt cctttaatat tggtagtgta gaactaagag attcattagc
     4081 cttttcaagt cctttataat aattgaataa tatcttgtag tcattaaagt taagttctga
     4141 cgcgattgga aatagagata ttatttcctg tggaacgctt gctgcctgaa aggcacgagt
     4201 gactttcgcg cgagacagat tctctttttt ggctatgtct ttataggaca tccctgatac
     4261 tttcagaaaa ttaagaccaa taccaagttc tcggatgcta tgctcttttg ctgtttgtat
     4321 atcgtttgct agttttctgg catcaagagt agatatatat tcttttgaat atagaacttc
     4381 aagatctgct cctgcatata ttgcagatgc tcttctacga gtgccatcca gaatttcaat
     4441 tctaccatca atctcccttc ctattacagg gaagaattgt tgtagcttta tagtttttat
     4501 gatatcggct aatgattctt ctgttaggga ttcttgatcg cgtacattcg ttttttggtt
     4561 gacgaaggtt aaatcttgga tccttttatg aggaatcttg gctttgataa aggaaacttt
     4621 attaccagaa tggagtgtaa actctttctt ttggccttcc tttatactta acaagtcgtt
     4681 gcacaaatcc accatatcac accctgttta ttcatattga tttatattga caaaagttaa
     4741 atgcagtgtg agcaagattg tatgtaactg ttgatgatag tcaacggtag tcttaaaaat
     4801 tactatttta atagctggat tgatgcaatt tatctttatt ggataaaaga ataatattct
     4861 tgtggagctc tgatgtgaga gctccataga tgaaaaaatg cttatcaatt actatattga
     4921 ttttgtacta tttttgacta cagaaataag atctccaata gtaataatgt gttctaatgc
     4981 agattcatct atacgtagat tgaactcaaa actaatcata tccagcattt caatcagaga
     5041 aagagaatcg gcagaaagat cttcaataaa tttagtttct tcagatagtt tgctgtacgc
     5101 tataccatag caaaaggcca ctattgataa tattttttct tttatcatat tttaatcctt
     5161 attgatattc tttaatactt ttgataggga agtggttaca tcttttgctg ctttatatat
     5221 attattgttt tcagctgtaa tatcattgtt attttttaaa tcagatatat catctgtaag
     5281 taattctgca gaggtatcgt caatttttga caataccttg ctgagggcgc tagatacttc
     5341 ttttgccttt tcatagatcg catgattttt atcaattgta tctgcgttgg tttctgttac
     5401 gtagtttatt gtatttgcat ctgtaacttt taatttgttg tttattctgt gttctgttgt
     5461 ggattttgta atgtcctttg atttttcctg taactctcgt tcttgtgttc ctgatttagt
     5521 tccaatgaga gatataagat tacttaggga gtttgttact ttttttgaag cttcaaatat
     5581 cgtttcccgt gttaaatatg tgtctccatt tcttgataaa aaatcagtct gaagtacttt
     5641 tgaatcagtg tttgagttga atttattgat ttgcgaagct actctatgag aaagagaagc
     5701 gctactttta gttgtatctg atgagttatc attactgctt gtcactcctt ccgggtggag
     5761 agggggggtg gttgaagagt tctgtatgtt cagaggcctg tgtccccgag aaagagagtt
     5821 atttgtagat ctttcttgac tactcgtagt taacaggtct gaacctattc catccgaatt
     5881 atctggagta tggttgaaaa ccttttctaa agctgaatta tttgcaaatg tctggacagt
     5941 atctgatata gagtgtggta gaacggaagt tactttttga actagtgctc tttgtggatt
     6001 tagtaatgag tttccgttac gggataatag atcgtttgtc tgagaagtag gagactgtgc
     6061 atcattttct gggttctcgt gatagctatt gtcatatact ctgttgtcaa aaactctatt
     6121 atcgtaagtt ctattatcat tatttatatg atagtgaatt acaggttggg atgttttctc
     6181 attggctccg ggggttggtc cgccatctgg catatcttcg ggaggtgtag ggaggccatc
     6241 ttggatagga tgcgaatctt ttatatcttc taaaatatca ttaaggactt ttctcaacag
     6301 ctcaggaaac acggctactg tatttaagtc tcttgacagt ttacctatac caaatccttt
     6361 actatcaata gtatttttac gttgattgcg caaactatca aaggcaagtt ttgcctgtgc
     6421 gtcaactaaa tcatctagtt tgagagatga aacagtttca ttacttaact ttaattcagc
     6481 aagaatatta ttcttgataa atgatgatac ttcagtattg aggagttttt gtcccaatga
     6541 taaagcttca ccagatgtgt gttgttgtgc taatagtgca agtctgtgct caatgttttg
     6601 tcgtaattga tggagtttct tattctttgc cgaccatggt ccaaaggcag aatcttggga
     6661 taatttatct tttataatta gttccgaata ctgtgcgaca attttttgaa gtcccttttc
     6721 gttttcaaaa ttaagatcat tttgatgtac taaggagtac aaaacatttg aaaattcgag
     6781 aatctcgctt ttggcatacg cattcattga gttggaataa atgcttctta acacatcttc
     6841 tttccctgag gaagaaaata aaaaatcaag acatttctga ttaaaagacg ttgcaaagtt
     6901 ttctttttca gacactgatg ctggtgtttt tagagaagtt tgcgaactat ggatatcgga
     6961 tattttgctt tttaactcgc tgtattctgt tgatgatggt gaagttgcct tatataagaa
     7021 tgttggcgct tgagtattat ttacattatg catggcgcac ctcagaaatg gagaaaaagt
     7081 ttatctgtat ctgtacatga gcttattgta ctactcaaaa cctttactaa attatcaaaa
     7141 atactattgg cattactgta tttttgaact aaagtttgaa gattattttt cattgtttca
     7201 tcttcggcag agaatccggc attccatgcc tgatattttg cattatctag cacaacctcg
     7261 ccatttccac ctagattatc taagcttttt aacatattgt ctattggggt catgtttata
     7321 ttgacaacat atcccccgtt tttttcagat accttgccga ttgttccacc taattctgta
     7381 agccatttat ttgcttgttc cttactaaca gtattatttg ctggatatag cggtttatct
     7441 ttatattttt ccttgagctt tgtcaattcg tctttaagcg atttgacttg taatttcacg
     7501 gagtttccgt cgttacctcc gggagagatc cagccggcaa gactggaaag aacagcgcta
     7561 aaatcttgat acatttgagt atatgaacta acggcatgtt catatacttt cagatactgt
     7621 tcattaatat tattgattga ctttgcaatt ttatcccaca gttctctgtg agatatcatt
     7681 tcatatccat caagctcggc ttctttcggg gctgaatgta ataattctct tgcgtcttta
     7741 ttaattggat attctttctt ggaaagaata tccaatagtt gagcggattt gtttacatcc
     7801 atgctaatct gagatgaatg taatgctatt tcttctagcg atgttttagt caacgttttt
     7861 tgtgagagat ctttctttaa tgcctgattt gttgttctga tattatgaag ggtgtcgttg
     7921 agcatagtaa gggaacttac aggatgagaa ctggtcgttg tttttatatc agaattaact
     7981 gtttcggttg atgaaccgtt ggtattgttt gggctgaatg atgaggtgga aatactatta
     8041 gtcagagttg ttatattcat ggttatttcc ttataggaag agccatatat tattatggct
     8101 cttggatata ttaagctcga atgttaccag caatctgact ggctgtagaa ttccttgatt
     8161 ggttgatgtt gtcaattata ttcaataatt tttgtattaa ttgatttgtc gcttgggatg
     8221 cttctttaga tacttgggat gcttcctctg cttgtttact gctggcctga ctgattagtt
     8281 gttcttcttc ttcaagagca gatgtataac gccctcctga tgtggatata ttaccagcaa
     8341 cggctgatgt ctccattgtt gcacggccaa tgttttgttt ttgctgagca gaaagggtat
     8401 tgagctcgta agctcttctc tgggtgtcaa ttttatcctg caaagaaata tcgggagaac
     8461 taagagaagt tttatgttca gttgacaggg atatattatc tggtgccagt ttatttttac
     8521 ctaaaatttt tgtgctagag ttagtttgtg gtgaggtgat atttgtatct atttgtttat
     8581 ttaaccctaa tttagaacct gcaagctctt tttcaagaga ttgagcagtg gcaaggttct
     8641 ttcttaaggc tcctttttgt tcgctaatcc ctgaatgcgt ttttttggca ccgatacccg
     8701 ttatacctac ttgtgtgacc gctccagtaa tgcttgatga tagggctgct aggccttgcc
     8761 gaacaatgtt ctctgcagct gattttgtag catcgaacgc aatcaatgac aattgagagc
     8821 ccaatctagt ttctgcagtg cggagagcag aaagtagaac ggctacacta ataattaaag
     8881 aaacagcatt agaagaaaga ctggaaatat ccagggtgtt ctctggggta attgtgtgac
     8941 tcatttctga aagatctttc atctttttgt cagtaaggcg agcaatgatt tctgaatcat
     9001 gctgaacctg ctctgataac tttaaaagtt gatcatcatt taatgtagtt gttaatacgg
     9061 gatttttacc gacattaagt ggaatatgtg ctgctaactg ctgataattt tgtgattttt
     9121 gtgtttcgga agaactttga gtttgttttg tagatatatc tgtatataaa atcggggctg
     9181 attttgtgtt ttgaatttcc ataacattct ccttatttgt atcaagcagt agtttgttgc
     9241 aaaattgctt ttgcaacatc agttctatta gcctgagagt tggacattga ggctaacagc
     9301 tctgcaatta cttcctgcaa ttggccgaat ttttctattg cgtcaccgat gtattttgac
     9361 agttgttcaa cttgatattt cgataatgtc aggtctgcta gatttttcga cgcgttgttt
     9421 tggaaaacag cagaagcgac atttcctccc gcttgtgtgg cagagttaac actttctcct
     9481 aataaaactg cttggtttaa atgggtggaa ataatttgtt tggatattac ttcatcaccc
     9541 gctgcaccaa gaaatttatt taatctggca acagcattag tgattaaatc gtccagttga
     9601 gaagaaaaat tcttgagaaa ctttggtata aggtctgtga gggttttacc tattattttg
     9661 ccaatattct ctgcaagttt tgctgctgcc tgtttaccaa cagtggctac gagaacgact
     9721 gctgcaacca agacaagagc gcctgcgatt gcccccagaa tagagccaat cattttggct
     9781 tttttcgagt cgacgcccaa gccttcgagc atttttgtaa atgcatctga aaggagtttg
     9841 attaagggtt caatgactgc tttcatgatc ggattcaggg cttgttccat gaaggaattg
     9901 ccggtcgctg cttgtactat agcatccgta accataagag ctaaaccaac agctgccagt
     9961 gctagagatg ctcctccaga aaaagctgct gcaacaacac taacgatagt taaaagtgcc
    10021 ccaagtattt tcccaacaca acccattact ctgttgagtt cttctgcttt acgtacttca
    10081 gcagcatact catcagattt tctctccatt tcagtttttc ttgattcttg gagagactgg
    10141 aatagagcca gatcattttt taaagattct tcattatttt ttccaactag ttgaataaag
    10201 gttgccatca attgagtaac actggcaagt ccggttaatg atttctgctg ggttgatagc
    10261 tgttcagcag atgctgtgtt tgaaaatgca gaaaaagagt ctatttcttt ttcgagttgc
    10321 attgatttat ctgtaagttt gctatgaatt gacagagttt tctgctcaat caatgtcctg
    10381 tctttaactg ctgcgtcttt tttgatagtg agttgtattt cttcccgtct taatttttta
    10441 ttttctggtg aatctggggc gagttcggat aatcttgttt gaatttggtt aattttattt
    10501 tctaggtctt ttattttaga atctgcgttt tttagtttat taatttgttt ttcatagtct
    10561 ctggttagtc cttcagtttc agatagaaga gtattaattt tatcggagaa ttctaggttt
    10621 ttttgctgtc ttgcctgttg ttgggacttc caggcagtaa ttttatttgt taatgcagtt
    10681 aaagattttt caccaagtat ttgaataagg tttccaatta aaagcgttag ttgggaactt
    10741 gcatttaatg actttggtgc tttaagttca gggattaata tattcgaagt tgagtgtgca
    10801 ttagttgtat taatattttt gttagcagca agatcagcaa ttgtaagaga aaataatttg
    10861 ttagctgcat catttgcagc ctggatagta ttgtctccaa gctcagtgga agccaatatt
    10921 ttggcaagag gcaaaccagt ggttgtggtg cttacattat gcataataat tactccttga
    10981 tatcctgaat tgcgtctaag tatgattgtg cttttatttt taatttttca tcattgctgt
    11041 gttgaattac gagttcgaag cactctttgg ctttcaaggg ggctttcaac cgaagctggc
    11101 attgtccagt atggaatacc ggtgtatagt cattttttcc taatgcaaaa gcgacagcat
    11161 aaaggtctgc tgcttgttgg aactgttctt ttatctgata aatagctgcg agtcccataa
    11221 tgtagtctac attgtaaaag tcgtatatac ataaaaatct gaagaaaact tcagcttcct
    11281 ctattcttcc tttgttgtaa aagtcataag catatgaata aatgtcatcc atcatatcat
    11341 caggaattgc attaatatct ttcagtgtag cgccagagtt aattgcatca attactgcag
    11401 tagagatgct ttcattttca gtgatattta aagacataag gtctcctttt tgtctgcatt
    11461 actttaataa gtataagatt taatataaac agatttaatt tgtattgctt tgacggtata
    11521 cagcctttag aacctctgcg cttatttcta tttgtaaaac ttttgttgat tcattaaata
    11581 ttttatcgta gacggaactg gatactagat ttgtaagatc cttcatttgt gtgttaaaca
    11641 aatccatgtc actgctataa cgttttaaaa tctttgctct gaggccagat gaggcaatct
    11701 cgtttagtgc tgtatgactg atagatgttt gtgctgattt ttcatcaagt tttatatccg
    11761 ggaatttttt ttcaatagct gcaaatatgt tttttttgtt atctgaggtc aaaacaactc
    11821 cattgtgtat ggccatttca tctatacttc tgtttatcat tgaagagaca taagaggttc
    11881 gctcttggct catccaacaa aatagttgat tccccgaatt actatctttt attttgtcta
    11941 tgacgctgtc cctgatttta tttatattca ccgggcatcc aaaattcttc tgaggaaagc
    12001 gttgttttaa gttaaaaaca gataatattt tctttacaag cttattgtga cttaacgaat
    12061 caaatgatgg gcgaggaatc gcgaattcaa cctgtggaag tattttgttt agaatttgca
    12121 tgataccccc tatatgttag ttcacttctg aagtgatgtt tgcaatggtt agtttaatac
    12181 aaaataaaaa ttcgtacaaa gattcaatga gttcatcagg tgaaagatat tttttgtagt
    12241 gtttcttggt caaaacacat tgatgagtat cagggagaag acagatagaa gaaccataat
    12301 ctctactcaa agagtagtta aggatgagta tgtgttctgg attaataata ttttctgtaa
    12361 aaagttcatg ttcattaaga agtccggtca aaaagatgta ttcatcatta tctgttatac
    12421 aaacaggtat ttgttcttcg agcaatataa aggcttgatt tttatcgtta aaatcaagct
    12481 ttgcacctgt tatttcataa agtttatcat atagtttgcg acacatttct atggccttct
    12541 atatattaga atgagagtta ttcaataaaa gcttattgac ctgtaataag tcgtgaatgt
    12601 aaagtttggt tccaagatct ggcgatttaa gagaattgta ataatcaata gtttttattg
    12661 acttttcgat aattacttct tttttatctg ttgctccggt ttttaattcg tttaatacac
    12721 gagacatatt gctgggtgct gattttacta agtatgagtg gcaagcgttg atgaccgcat
    12781 caaagtcttc tgaagataca ttttcagtag gatgtttgta aagtgaaatt gataaaggct
    12841 tgaatgtttt tggggtgtgg ataaggttaa ttttattgaa acttttaaga tagctacgtc
    12901 gtaattgagt caatctggaa agatcaaaat cagattcaat atacttcatt atctcgttat
    12961 aagactgatt gagactttca atgcgttgcc taactttatt tgcatacgcg tatacattgt
    13021 taggtgtagc aaccaattta acgtcaggga gtggaaagta tatttcagaa tttcctgctt
    13081 taagaacatt aagtgccata ccagcacagt tttcagattt actgattaat ttataatttg
    13141 ccaattgtct gaaagcatct gctttctttt ggcatataaa ttttgacatg tttgtttcat
    13201 caaggccaaa aaggttatag ctgattttac catcctttgt tttattatca cctgataatg
    13261 gaatgtatac tttatcagca ctgacccccc aataaccata gggatctttt ttttgattag
    13321 ctctgggaaa aaatattttt ttgttgttat tttgatcttg ttttgaattt aataagtttc
    13381 taacctcttg gcctgcatca agtctttcgg ctgtttggtc tgaaatcata tttagtttgt
    13441 cttgtttata ggtatcgaca ctgtaacctg agcgtttttc aaaaaggtag tttatttctg
    13501 tatcttttgt aacattcccg ccgggatacc agctgagata ggtatgagtt ggttcctgta
    13561 gtaaattgtt ttttatactg atactggtat gccctaaatg ggttatgcct ctatttcccc
    13621 agcaacgaaa cactaaatgt ctttcaagat ttttggctgt accgatgcca tgaaaactct
    13681 ctgcggtatt caacattaat ttgatgtctt tacctgtaaa agaatgttga attgaatttt
    13741 tgactgcttc ataggcggca aacgcacttt ctgcagattt ttcgctagct aatgtcttga
    13801 ggaaaagcaa taaggatttt tgattcgcta gtcgataatt ttttagttgt tcatttaata
    13861 tctgtgaatt tatctttgca ttaatagtgc ttaatgttct gaaaaagaga tcctttaggt
    13921 tgaatttctg tgctaccaat ataggtccat gctctgtatc ttcaacgcgt ataggccctt
    13981 ttgtattgct tgcgtcaatg aaattgctaa ttttgagaat catactttat taactctcca
    14041 ttacgtggtg attgtgggga tgtaaaatgt atttgatata taatatattc aattaataaa
    14101 tttagaaact tgagcctgtt aacataatca aattttcttt tgctgtacat aatatgtacc
    14161 tcgtgagcat atgtagtgct ggtttcatca tgaaatccca caagttaaag tgtctgatat
    14221 atcaggctcg gagtgttata gaaaaagaga gaaccctgtt gaataagtat cttttttgtt
    14281 gtaaaacgag gtacaaaact gcaatcaatg ccccatttat gactgaggat aattaaatgc
    14341 acataactaa tttgggattg catcaggttt catttcaaag cggagattcc tataaaggcg
    14401 cagaagaaac cggaaaccaa aaaggtgtaa gcgtgatttc atatcaaaga gttaaaaatg
    14461 gagagagaaa taagggggtc gaagcgctta atcgattata tttacagaac caaacaagct
    14521 taacagggaa aggccttttg tttgcgcgtg acagagctgc agttttttac gaggcaataa
    14581 agttggcagg tggtgatacg tcaaaaatta aagccatgat ggaacaatta gatacctata
    14641 aacttggtga agttgataaa agaaatatta atgagcttaa taaagtaata agtgaagaga
    14701 taagagcaca gctaggcatt aaaaataaaa aggaattgca atcggaaata aaacaaatat
    14761 ttactaatta tttaaataat aagaattggg aaccgatcaa caaaaatatt aattataatg
    14821 ggaaaaatta tggttttcaa ttaacacccg cctctcatat gaagataggg aataaaaata
    14881 tatttgtcaa agagtataat ggaaaaggaa tttgttgtgc ttctacgaga gagagtaagc
    14941 atattgcgaa tatgtggctt tcaaaagtgg tggatgacga ggggaaggaa attttttcgg
    15001 gtatcagaca tggagttata tcagcctatg gattgaaaaa aaactcatct gaaagagctg
    15061 ttgcagctcg taataaagct gaggagttag caagcgcagc attatatagc agacaagaat
    15121 tattatcaca ggctttgtct ggtaaaacag tagatttaaa gattgtttcg acttctcttc
    15181 tgacgccgac cagtttaact gggggagagg agagtatgtt aaaagatcag gtaaaggcat
    15241 taaaagagtt aaactctaaa aggggggaac caacgaaatt attaattcgg aatagtgatg
    15301 gtcttctgca agaagtaaag gttaatctaa aagtggtgac atttaacttt ggtgtaaatg
    15361 aattagcgct aaaaatgggc ttaggctgga ggaatgttga caagcttaat ggtgaatcaa
    15421 tatgttcttt gttgggggat aatttcctca aaaatggtgt gattggaggt tgggctgcag
    15481 aagctataga aaaaaatcca ccatgtaaga atgatgtgat atatctggct aaccagataa
    15541 aagagattct aaacaagaag ttacaaaaga atgataatgg agagccgtat aaattgtcac
    15601 aaagaatggc tctattggct tatactatag gtgctgtacc ttgctggaat tgtaagagtg
    15661 ggaaggacag aacaggtatg caggatgctg aaattaaaag agaaataata agaaaacatg
    15721 aaacagggca gttttctcaa ttaaatagta aattatcctc agaagagaaa agattatttt
    15781 ctactattct aatgaatagt ggtaatatgg aaatccaaga gatgaatact ggtgtgcctg
    15841 gaaataaagt tatgaaaaaa ttaccgctat cttcgttaga gctgtcttat gctgaaagaa
    15901 taggggaccc caaaatatgg aatatggtga aagggtattc gtcatttgta taagaggaat
    15961 atatggaaga tttagcagat gttatttgcc gagccttggg tatcccttca attgataccg
    16021 atgatcaagc aatcatgctt gatgatgatg tgttaatata tattgaaaaa gaaggagatt
    16081 caataaattt attatgccct ttttgtgcat tgcctgaaaa tataaatgat cttatatatg
    16141 cgttgagcct aaattactca gaaaagatat gtttagctac tgatgatgaa ggtggaagtc
    16201 taattgcgcg attagatctt accgggataa atgaattcga ggatatatat gttaatacag
    16261 aatattatat ttcgcgtgtg cgttggctga aggatgaatt tgcgcgaaga atgaaggggt
    16321 attaatgtcc cgtttcgtat ttatttttct gtgttttatc ccatatttag ggagagctga
    16381 ttgttgggat aaggctggtg aaaggtacaa cattccatcg agtttgttaa aagcgatagc
    16441 ggaaaaagaa tccggattta ataaatttgc agtcaatgtt aataacaatg gaagtaaaga
    16501 ttatggtata atgcaaataa atgactttca ttctaaaaga cttagagaaa tgggatatac
    16561 tgaggaaatg ctaattagtc atccatgtct ttctgtacat tatgcagcaa agttattaaa
    16621 tgagtttatg ctgatgtatg gaagagggtg ggaggctgtt ggtgcctata atgcaggaac
    16681 atctccgaaa aagaaaaaag aaagattaaa gtacgcagag gatatctata aacgctattt
    16741 gcggatagca gcagagagca agcagaataa tcgaaggata taagaggatt tatgtctgag
    16801 gcaaagaact caaatcttgc accattcagg ttattagtga aactcacaaa cggtgtcggg
    16861 gatgagtttc cgttatatta tgggaataac ttaattgttc tcggacggac gatagaaaca
    16921 cttgagtttg gaaacgataa tttcccagaa aatattattc cagtaacaga tagtaaatcg
    16981 gatggtataa tttatttggc cataagtaaa gataatatct gtcaatttag tgatgaaaaa
    17041 ggtgaacaaa ttgatatcaa ttcacaattt aactcatttg aatatgacgg agtttctttt
    17101 caacttaaaa atatgatgga ggataaatcg agagttcata tactaaacgg aatgtataat
    17161 aaaccctcgg tgtttttttt ctttgctgtt attgttgtgt taattataat tttttccctc
    17221 tctttaaaga aagatgaagt aaaagaaatt gctgaaatta tagatgataa gagatatgga
    17281 atagtcaaca caggacagtg caattatatt cttgccgaaa cacaaaatga tgcggtatgg
    17341 gcatctgtag ccttaaataa aagcggattt accaaatgca gatatattct ggtgtccaac
    17401 aaagaaataa atagaattca acaatatatc aatcaacgat tcccatatat caatttgtat
    17461 gtgttgaatt tagtgagtga taaagcggaa ttactggtat ttttaagtaa agaaagaaat
    17521 agttcaaaag ataccgaact tgagaaattg aaaaatgctc tgatagttga atttccgtat
    17581 atcaaaaata ttaaattcaa ctatcttagc gatcataatg caagggagga tgctaaaggt
    17641 attttcacaa aggtaaatgt ccagtataaa gagatttgtg aaactaataa agttacatat
    17701 tctgtcagag aagaactgac agatgaaaag cttgagctca ttaatagact gatttctgat
    17761 cataaaaatg tatatggaga tcagtatatt gagttttctg tacttttgat agatgatgat
    17821 tttaaaggta aatcatatct taacagcaaa gacagttatg taatgttgaa tgataaacac
    17881 tggttttttt tagataaaaa taagtgagga taaaatgagt gttacagtac cggataaaga
    17941 ttggactctg agttcattat ctgaaacttt tgatgatgga actcaaacat tacaagggca
    18001 actaacatcg gcactaaatg cattagctga aaatccttcg aatccacagt tgctggctga
    18061 ataccaaagt aaattatctg aatatacatt atataggaac gcgcaatcta atactgtgaa
    18121 agtgattaag gatgttgatg ctgcaattat tcaaaacttc agataatagg gagcattcat
    18181 gaattacatt tatccagtca atcaggttga tattatcaaa gccagtgatt ttcaatctca
    18241 agagatatca agcctggaag acgtcgtgtc ggctaaatat agtgatatta agatggatac
    18301 agatattcaa gtatcacaaa taatggagat ggtaagccat ccagaatcat taaacccaga
    18361 atctttggcc aagttacaga cgacgctctc aaattattca ataggagtat cattagctgg
    18421 cacgttagca agaaaaacag tttcggctgt tgaaacttta ttaaagtctt aatttatatg
    18481 attaggtata aatgttttat tttattcttg ttgctgatgt tgattggatg tgagcaacgt
    18541 gaagagttaa tttctaattt atctcaaaga caggcaaatg aaataatatc tgtgctagaa
    18601 cgccataata ttactgctag aaaagttgat ggaggtaaac aggggatctc ggtacaagtc
    18661 gaaaagggga catttgcatc ggcagttgat ttgatgcgca tgtacgattt gccaaatccg
    18721 gagagagttg atatctcaca aatgtttcct acagattcat tagtgtcttc tccaagagct
    18781 gaaaaggccc gtttatatag tgctattgag caacggctgg aacagtcttt agtttctatt
    18841 ggtggtgtta tttcggcaaa aatacatgtt agctatgatc ttgaagaaaa aaatatatct
    18901 tcaaaaccga tgcatatatc agtaatcgct atatatgact caccgaaaga gtctgaacta
    18961 ttagttagta atattaagcg atttttgaaa aacacctttt ctgatgttaa gtatgaaaat
    19021 atatctgtca tattaactcc gaaagaagaa tatgtttata caaatgtaca acctgttaag
    19081 gaaattaaat cggaattttt aacaaatgaa gtaatatatg tatttctcgg gatggctgta
    19141 ctagttgtca ttcttttggt atgggcattc aaaacagggg ggttcaagag aaacaaaata
    19201 tgataagaat ggatggaatt tataaaaaat atctttcaat aatttttgat ccagcgttct
    19261 atataaatag aaatcggttg aatttgcctt ctgaactgtt agaaaatggc gtaatcagaa
    19321 gtgagattaa taatctcata attaacaaat atgatctaaa ttgcgatatt gaacctttaa
    19381 gcggggtaac cgctatgttt gttgccaact ggaatttact tccagctgtt gcttatttta
    19441 tcggtagtca agagtctcgg ttaattaatc atagtgagat ggttattagt tattatgggg
    19501 gcaaaatcag taagcaaggg gaggccgcta ttcgaagtgg tttttggcat cttattgagt
    19561 ggaaggaaaa tatatctgtt ggtatatatg aaagaataaa cttattattt aatccaattg
    19621 ctttggaggg aaattatacg cctgtagaaa gaaatttgtc ccgattaaat gaaggtatgc
    19681 aatatgcaaa aaggcacttt accggtatcc agacatcatg cctatgatgg tgttgttata
    19741 aagagaattg aaaaggaatt atgtaaaacc ataaaagata gagacactga gagtaagaag
    19801 aaagcaattt gtgttataaa ggatgctacg aaaaaagctg aatcactgcg tatagatgct
    19861 gtatgcgatg gttatcaaat tggtatacag actgcttttg agcatattat tgactatatt
    19921 tgtgaatgga agttaaagca aaatgaaaac agaagaaata ttgaggacta tataactagt
    19981 ttgctttcag aaaatttaca tgatgagagg atcattagca ctttattgga gcagtggctt
    20041 agttcgttgc gtaatacagt aacagaatta aaagtggttt tgcccaagtg taatttagca
    20101 ctgaggaaaa agttagaact tgatctccat aaatatcgct cagatgtcaa gattatttta
    20161 aaatattctg aagggaataa ttatatattc tgtagtggta atcaagtagt ggagtttagt
    20221 cctcaggatg taatatcagg tgttaaaata gaacttgcgg aaaaattaac aaaaaatgat
    20281 aaaaaatatt tcaaagagtt agcacataag aaactgagac aaattgcaga agacttgtta
    20341 aaagagaatc ctgttaatga ttaatcaaat aaatgcaagc aatgctctgc agcaaagatt
    20401 aaatagtgaa gaatttgtta atttaaatga gagattatca tcttcgcaat catttgatga
    20461 gaatataatc tatgaaataa tgcaatattt ctcacagagt gaattaaatt ccatagataa
    20521 tgatgaactg cacaataaga ttgaacaatt attcaattca cgttttcctt atcttacagc
    20581 tgcacaaaaa agttcacttc ttaataaact catagatgca aatcaatatg tcgatttgca
    20641 tgagggattt tatgcatcat tgtccatata taacaatatt gatttctata ttaagactac
    20701 aaccttcgat tcattaatta gtgtctttga agcagggaga gaggcagatg attcgacatg
    20761 gtagtaataa gttgaaaata tttattttaa gtatattgct attaacactg agtgggtgtg
    20821 ctttaaagtc atcatctaat tctgaaaaag aatggcatat tgttcctgta agtaaggatt
    20881 atttttctat tccaaatgat ttattatggt cgtttaatac aaccaataaa agtataaatg
    20941 tttactctaa atgtattagt ggtaaggcgg tttatagttt taatgcaggt aaattcatgg
    21001 gcaactttaa tgttaaggaa gtagatgggt gcttcatgga tgcacaaaag atagctatag
    21061 ataaactatt ttctatgctg aaagacgggg ttgttttaaa aggtaataag ataaatgata
    21121 ccatccttat agagaaggat ggggaagtta aattaaaatt aattcgaggg atataattgt
    21181 attgtgagta aatataaagg tctaaataca agtaatatgt tttacattta ctctagtgga
    21241 cataaaccag ttaacgttga gcttgtaaaa gataaagaac gtaacataat tgagctggct
    21301 ccagcatgga agggtttttt tttgtccgaa atcaaaatat aaaattcagt gataatgtga
    21361 actatcatta tcgctttaac attaatagtt gtgcaaaatt tcttgctttt tgggactatt
    21421 tcagtggtgc tctagtagag catagccatg ctgaaaaatg tattcatttc tatcatgaga
    21481 atgatcttcg ggatagttgt aataccgaat cgatgcttga taagttaatg ttaagattca
    21541 tcttttcatc tgaccagaat gtaagtaatg cactggctat gatacgaatg actgagtcat
    21601 atcatttggt tctttatctt ctgagaacta ttgagaaaga aaaggaggta agaataaaga
    21661 gtctgacaga gcattatggt gtgtcggagg cttattttag atctttatgt agaaaagctt
    21721 taggggcaaa agtcaaagaa caactgaaca cttggcggtt agtaaatggt ttattagatg
    21781 tatttttgca caatcaaaca atcacttctg ctgccatgaa taatgggtat gcatcaacat
    21841 cccatttttc aaatgagata aaaacacgac taggcttttc tgcaagagaa ttatcgaata
    21901 ttactttttt agtgaaaaaa ataaatgaaa aaatttaata ttaaatcttt gactctcttg
    21961 attgtattgt taccattgat agttaatgct aataatattg actctcattt attagaacaa
    22021 aatgacatag cgaaatatgt tgctcaaagt gatacggtag gatctttttt tgaacgtttt
    22081 tctgcgttat taaattatcc tattgttgtt agcaaacaag ctgcaaaaaa gagaatatct
    22141 ggggagtttg atttatctaa tccagaagaa atgcttgaaa aaatgacatt acttgtggga
    22201 ctcatatggt ataaagatgg aaatgcatta tacatatatg actctggaga attaataagc
    22261 aaagttattt tgctggagaa tatatcactt aattatctta ttcagtatct gaaggatgct
    22321 aacctttatg atcacagata tcctataaga ggaaacatta gtgataaaac attctatata
    22381 tctggtcctc cggcattggt tgaactggta gctaatacag caactttgct tgataagcag
    22441 gtttcttcta ttgggacaga taaagttaat tttggggtta taaaattaaa aaatacattt
    22501 gttagtgaca gaacttataa tatgagaggg gaggatattg tcatcccagg ggtggctact
    22561 gttgtagaac gtttattaaa taatggtaag gctctgagta acagacaagc caaaaatgat
    22621 ccgatgccac cctttaatat tacacagaaa gtatctgagg atagtaatga cttttcattt
    22681 agttcagtta ccaatagttc tatattagag gatgtatcac ttattgcata tccagaaacc
    22741 aattctatat tagtcaaagg taatgatcag caaatacaga ttattcgcga tattatcact
    22801 cagttagatg tagccaaacg acatatagaa ttatcattat ggataatcga tattgataaa
    22861 tctgaattaa ataaccttgg cgttaattgg caaggaacgg cttcatttgg tgattcgttt
    22921 ggtgcatcat ttaatatgag ctcatcagca tcgataagca ctttggacgg caataagttt
    22981 attgcttcag ttatggcatt aaatcagaaa aagaaagcaa atgtagtttc aaggccggtg
    23041 attttgacac aagagaatat tccggctata tttgataata acaggacttt ttatgtgtca
    23101 ttagttggtg agcgcaattc ttcgttggag catgttacgt atggaacatt gataaatgtt
    23161 atacctcgct tttcatctca gggacaaatt gagatgtctt taacgataga ggatggaaca
    23221 ggaaatagtc agtcaaatta caattataat aatgaaaata catctgtcct tccagaagtt
    23281 ggaaggacca aaatcagtac aatagcgaga gttccacaag gcaaaagttt gttgataggt
    23341 ggttatacgc atgaaacgaa ctctaacgaa atagtatcta ttccttttct ctcctctatt
    23401 cctgtaatcg gtaatgtgtt caagtataaa acaaggaata tcagtaatat tgtaagggtt
    23461 tttctgattc aaccccgtga gataaaggag tcaagttatt ataatactgc agaatataag
    23521 agcctcatat ctgaaagaga aatacaaaag actacacaaa taatcccatc tgaaactact
    23581 ttgctggaag acgaaaaatc attggtttca tacttaaatt actaactata aagtaggtga
    23641 tgtatgcttg atgttaaaaa tacaggagtt tttagctctg cattcattga taagttgaat
    23701 gcaatgacaa attcagatga tggagatgag actgctgatg cagagcttga ttctggcttg
    23761 gctaatagca agtatattga ctcatctgat gagatggctt ccgctctttc gtcatttata
    23821 aacagaagag accttgagaa actgaaagga acaaatagtg atagtcagga acgtatttta
    23881 gatggggaag aagatgaaat taatcacaag atttttgatt taaagagaac tttaaaagat
    23941 aaccttcctc tagatcagga ttttatagac agactaaaga gatattttaa agatccaagt
    24001 gatcaagtct tagcattaag ggaacttttg aatgaaaaag atcttactgc tgaacaagtc
    24061 gaatcattaa ctaaaattat taatgagata atatcaggta gtgaaaaaag tgttaatgct
    24121 ggaataaatt cagctataca ggctaaatta tttggcaaca aaatgaaact tgaaccgcag
    24181 cttttgcgtg catgttatcg tggttttatc atggggaaca tatcaacaac agatcagtat
    24241 atagaatggc ttggtaattt tggttttaat cacagacata caattgtgaa ttttgtagag
    24301 cagtcactga ttgtagacat ggattctgag aaaccgagct gtaatgctta tgagtttggt
    24361 tttgtgttat ctaaattaat tgcaattaag atgattagaa cttcagatgt aatttttatg
    24421 aagaaactgg aatcctcaag cttgctaaaa gatggcagtt taagtgcaga gcagctattg
    24481 ctaactttat tatatatttt tcaatatcca agtgaaagtg agcaaattct tacttctgtt
    24541 atagacgtat cacgagccag tcatgaggat tctgtagtgt atcaaacata tctatcttct
    24601 gttaatgaaa gtcctcatga tatatttaaa agtgaaagtg aaagagaaat tgcgatcaat
    24661 attctacgag agcttgtcac aagtgcatac aagaaagagc tttctagata acaggagatg
    24721 aaagtgatcc agtcttttct taagcaagta agtactaagc ctgaattaat tatattagtg
    24781 cttatggtta tgatcattgc tatgttgatc ataccattac ctacatacct tgttgatttt
    24841 ttaatagggc ttaatattgt acttgctatt ctcgttttta tgggatcatt ttatattgaa
    24901 agaatattga gtttttctac attcccttcg gttttgttga taacgacatt atttcgtctc
    24961 gctttatcaa taagtactag tcgactaatt ttagttgatg cggatgcggg taaaattatt
    25021 actacatttg gccagtttgt cattggtgat agtctggctg taggttttgt tattttttca
    25081 atagtaactg ttgtgcagtt cattgttata acaaaaggat ctgaaagggt tgcggaggta
    25141 gctgctcgct tttctcttga cggtatgccg gggaaacaaa tgagcattga tgcggattta
    25201 aaggctggaa ttattgatgc cgcaggagct aaagaaagac gcagtattct ggaacgtgag
    25261 agtcaattgt atggttcatt tgatggagca atgaagttca ttaaaggtga tgcaattgct
    25321 ggcatcatta ttatttttgt caatttaata ggaggtattt ctgttggtat gagtcaacat
    25381 ggaatgtctc tatctggtgc attatctact tataccatac taactattgg tgacggattg
    25441 gtctctcaga ttcctgctct gttaatttct ataagtgcag gatttatcgt tacaagagtt
    25501 aatggtgata gcgataatat gggacgtaac ataatgtccc agatatttgg gaatcctttt
    25561 gttctcattg ttacatcagc tcttgccttg gcgataggga tgttgccagg ttttccgttt
    25621 tttgtttttt tcctgatagc agttactttg acggctttat tctattataa aaaggtcgta
    25681 gaaaaagaaa aaagtctgtc tgagtctgat tctagtggct atactggtac atttgatatt
    25741 gataatagcc atgactcatc tttggcaatg atagaaaatc tggatgctat tagttcagaa
    25801 accgttcctt taattttatt atttgccgaa aataagataa gtgcaaatga tatggaaggt
    25861 cttattgaaa ggataagaag tcagttcttt attgattatg gtgtcaggct tccaactatt
    25921 ttatatagaa caagcaatga gcttaaggtc gatgatattg ttttgttaat aaatgaggtg
    25981 cgtgccgata gttttaatat atactttgac aaagtgtgta ttacagatga aaatggagat
    26041 atagatgctc taggtattcc tgttgtttca acttcatata atgaacgtgt tatttcttgg
    26101 gtagacgttt catatacaga aaatctaact aatattgatg ctaaaattaa aagtgctcaa
    26161 gatgaatttt atcaccagtt gtcacaagct ttattaaaca acataaatga gatttttggt
    26221 atacaagaaa caaaaaatat gttagatcag tttgaaaatc ggtatcctga tctattaaag
    26281 gaagtcttcc gacatgtgac tatacagaga atttctgagg tattacaaag attgcttgga
    26341 gaaaatattt ctgttcgcaa tttaaaactt attatggagt ctttggcgct ttgggctccc
    26401 agagaaaaag atgtcataac attagttgaa catgtccgtg catcactttc taggtatatt
    26461 tgtagtaaaa tagctgtttc tggtgagatt aaagttgtga tgctttccgg atatattgag
    26521 gatgcaataa gaaaagggat aaggcaaacc tctggtggct ctttcttgaa tatggatata
    26581 gaggtttcgg atgaggtaat ggaaacttta gcacatgctt tgagagaatt gagaaatgca
    26641 aaaaaaaatt tcgttctttt ggtatcagta gatatacgta ggtttgttaa aagacttata
    26701 gataacagat ttaagagtat actcgttata tcgtatgctg agattgatga agcatatacc
    26761 attaatgtat taaagactat ttagtgaggt ttaaatatga gtaacattaa tttagttcaa
    26821 ttagttagag atagtctttt cacgattggt tgtcctccat caattattac agatttagac
    26881 agccattcag cgattaccat ttctttggat agtatgcctg ctattaatat agctcttgtc
    26941 aatgagcagg ttatgttatg ggctaatttc gatgcaccaa gtgatgtaaa acttcagtca
    27001 tctgcttata acatattaaa tttaatgtta atgaacttta gttatagcat taatgagctg
    27061 gtagagcttc atcgttctga tgagtactta cagttaagag ttgttattaa agatgactac
    27121 gttcacgatg ggattgtttt tgcagagatt ctgcatgagt tttatcagag gatggaaatc
    27181 ttaaatgagg tcttataatc aatgagctat ataaaattgc tcactcaatt atcttttcct
    27241 aatagaatct cggggccaat cttggaaaca agtcttagcg atgtttcgat tggtgagatt
    27301 tgtaacattc aggctggaat tgaaagtaat gaaattattg caagagctca ggttgtagga
    27361 tttcatgatg aaaaaacaat attaagcttg attggaaatt ctcgtggact ttcacggcaa
    27421 acgttgatta agcccactgc ccagtttctt catacgcaag tcggccgtgg attattggga
    27481 gcagtagtca atcctttagg ggaggttact gataagtttg ctgttacgga taacagtgaa
    27541 attctttatc gacctgtaga taatgctcct ccgctatata gtgaaagggc tgcaattgag
    27601 aagccttttt taacaggtgt taaggttatt gattctttac tcacgtgtgg tgaaggacag
    27661 cgaatgggga tttttgcgtc agctggttgt ggcaaaactt ttctcatgaa tatgctcatt
    27721 gaacatagtg gtgctgatat atatgttatt gggttaattg gtgagcgagg tcgagaggtt
    27781 acagaaacgg ttgattattt gaaaaactct gagaaaaaaa gcaggtgtgt tttagtatat
    27841 gcaacttcgg attactcttc ggttgatcgt tgtaatgctg catatatagc cactgctata
    27901 gccgaatttt ttaggactga aggacataaa gtagcgcttt ttattgattc attaacaagg
    27961 tatgccagag cattacgtga tgtggcctta gccgctggag aatcacctgc cagaagaggc
    28021 tatccggttt cggtttttga tagcttaccc agacttcttg aaaggccagg aaagttaaag
    28081 gcaggtggct ctattactgc attttacact gttcttttgg aggatgatga ttttgctgat
    28141 ccattagctg aagaggtaag atccatttta gatggacata tatatttgag cagaaatcta
    28201 gcccaaaaag gacaatttcc tgcaattgat tccttaaaaa gtataagcag ggtatttaca
    28261 caggttgttg atgaaaaaca tcgtattatg gccactgcat ttcgggagct actttctgaa
    28321 atagaagagc taaggacaat tattgacttt ggtgaataca aaccggggga gaatgcctct
    28381 caggataaaa tctacaacaa aatatctgtt gttgagagtt ttctgaagca agattatcga
    28441 ctcggtttta cttatgagca gacaatggag cttcttggtg aaacaattag ataaggtttt
    28501 aaaaatcaaa gataaatatc aacggtctgt taaattaatt gaagcacaca tattaacact
    28561 aaaaaaaaaa ctctttgtat cgagatgtgg aggcattaga taaaaggatt atatacttcc
    28621 tgcaactgga gaatgacttg gaacctgtag gcgctcagag tgttagtcag cttttcaata
    28681 caagacgtaa gatcgctata gtaaaaaagc atattatcca atatcagtct gaacgaattc
    28741 ttctaaaggg aagaattgaa gaaattcaaa aagatattga tgaggcaaat gcttctaaaa
    28801 gaaaactgct tcataaagag agtaaaatat gtaaacggat tggcttgatt aaaagaaata
    28861 actttgccaa acagttgata cttgatgagt tatcacaaga ggatatgaag tatggcatta
    28921 gataatataa acctaaattt tagtagtgac aaacagatag aaaaatgtga gaaactatct
    28981 tcaatagata atattgatag tctcgttttg aagaagaaga ggaaggttga aattcctgag
    29041 tactctttaa ttgcatctaa ctattttact attgataagc actttgaaca taagcatgat
    29101 aaaggagaaa tttatagtgg cattaaaaat gcgttcgaac ttagaaacga acgagcgaca
    29161 tattctgata ttccagaatc aatggccatt aaagaaaata ttttgatacc agatcaagat
    29221 atcaaagcaa gggaaaaaat aaatatcggc gatatgaggg ggatcttttc atataataag
    29281 agtggaaatg cagacaagaa cttcgaaaga agtcatactt cttctgtaaa ccctgataat
    29341 ctgctagaat ctgataatag aaatggtcaa attggtttaa aaaatcatag cttgtctatt
    29401 gataagaata ttgctgacat catttcttta ctaaatggaa gtgttgctaa atcatttgag
    29461 ctgcctgtaa tgaataaaaa tactgcagac ataaccccat ccatgtcatt gcaagaaaaa
    29521 tcaatagttg aaaatgataa aaatgttttt caaaaaaata gtgaaatgac ttaccacttt
    29581 aaacagtggg gggctggaca ttctgttagt atttcagtgg agtctggttc ttttgttcta
    29641 aaaccgtcag atcaatttgt aggaaataaa cttgacttaa ttttgaaaca agatgctgag
    29701 ggtaattaca gatttgatag cagtcaacat aataagggga ataaaaataa tagtacagga
    29761 tataatgaac agagtgaaga agaatgctaa gaattaaaca ttttgacgct aacgaaaaac
    29821 tacagatttt atatgcaaag caactctgcg agcgtttttc gattcagaca ttcaaaaata
    29881 aatttacagg cagtgaaagt ttagtcactc ttacttccgt gtgtggggat tgggtaattc
    29941 gtattgatac attatctttt ttgaaaaaaa aatacgaggt attttcagga ttttctacac
    30001 aagaatcttt actgcattta tcaaaatgtg tctttataga gtcgtcatct gtattttcga
    30061 ttccagaact gtctgataag attactttcc ggatcacgaa tgaaatccag tatgcaacta
    30121 ctgggagtca tttatgctgt ttttcctctt ctttaggtat tatttatttt gacaagatgc
    30181 cggtattacg taatcaagtt tctcttgact tattgcatca tcttttagag ttttgcttag
    30241 gttcatctaa tgtaaggctg gctactttaa aaagaattcg tactggtgat ataatcatag
    30301 ttcagaaact ttataattta ttattgtgta atcaagttat tattggggat tatattgtga
    30361 atgataataa tgaggcaaaa attaatctgt cagaaagtaa tggtgagtca gatcacacag
    30421 aagtttcttt ggcattattc aattatgatg atatcaatgt aaaagtggac tttatccttt
    30481 tagaaaaaaa gatgacaatc aatgaactaa aaatgtatgt agaaaacgaa ttattcaagt
    30541 ttcccgatga catagttaaa catgtaaata ttaaagtaaa tggttctttg gttgggcatg
    30601 gggaacttgt ttctattgag gatggttatg gtatcgagat tagttcttgg atggtaaagg
    30661 agtaatctca tgctgagtga tatgtccctc atcgctacac tttctttttt tacgctatta
    30721 ccatttttag ttgctgctgg tacttgttat ataaagtttt ctattgtttt tgtaatggta
    30781 cgaaatgcac ttggtttgca gcaggttcca tcaaatatga ctctcaatgg tattgcattg
    30841 attatggctt tgttcgtgat gaaacccatt attgaagctg gttatgaaaa ttatctaaat
    30901 ggcccgcaaa aatttgatac aatatcagat attgtccgtt tttctgattc tggcttgatt
    30961 gaatacaagc aatacttgaa aaagcataca gatcttgagt tggcacgttt tttccaaagg
    31021 tctgaagaag aaaatgctga tttaaagagt gcagagaata atgattattc attgttttcc
    31081 ctcttgcctg catatgcgct aagtgaaatt aaagatgcgt tcaaaatagg tttttattta
    31141 tatttgccat ttattgttgt tgatcttgtt atttcaagca ttttacttgc acttggtatg
    31201 atgatgatga gtccaatcac aatatcagta ccaataaaac ttgtattatt tgttgcgctt
    31261 gatgggtggg ggatcctgtc taaggccttg attgaacaat atatcaatgt tcctgcttag
    31321 atgatggagg taatgtgtct gatatagttt atatgggtaa taaggctctt tatttaatcc
    31381 ttatcttttc cttatggcca gtaggtatag ctacggttat tggattaact attggtttat
    31441 tacagacagt gactcaactt caagagcaga cacttccttt tggtataaag cttataggtg
    31501 tctcaatatc tttgctactt ctttctggat ggtatggtga ggttttattg tctttttgtc
    31561 atgaaataat gtttttaatt aagagtgggg tttgatggac atttcaagct ggttcgaaag
    31621 tattcatgtg tttttaatac tcctgaacgg cgtttttttt agattggctc cattattttt
    31681 ctttcttcca tttttaaata acggtataat ttctccatct attagaatac ctgtgatttt
    31741 tcttgttgca tcaggattaa ttacttctgg taaggtagac ataggttctt ctgtttttga
    31801 acatgtttat ttccttatgt tcaaggaaat aattgttggc ctccttctct ctttttgctt
    31861 gtctcttccc ttttggatat ttcatgctgt tggtagtatt attgacaacc agcgtggggc
    31921 aacgcttagt agttcaattg atcctgccaa tggtgttgat acgtctgaat tggcaaaatt
    31981 tttcaatctt ttttctgcag ttgtatttct atacagtggt ggaatggtct ttattttaga
    32041 atccatacaa ttgtcttata atatatgccc gttattttct caatgttctt tccgtgtctc
    32101 aaatatctta acatttctga ctttattggc aagtcaggct gttattttag ccagtcctgt
    32161 tatgatagta ttgttactat cagaagtatt acttggtgta ttatcgagat ttgctccgca
    32221 gatgaatgct ttttccgtat cattaactat taaaagttta cttgcaatat ttattatttt
    32281 catctgttct tctactattt acttttctaa agttcaattt ttcctcggtg aacataaatt
    32341 tttcacaaat ctatttgtta gataaaatat tatggcaaat aaaacagaaa agccgacacc
    32401 taaaaaacta aaggatgccg caaaaaaagg acagtcattt aaatttaagg atttaacgac
    32461 agttgttatt attctggtag ggacatttac tataatatca ttcttttcct taagtgatgt
    32521 aatgctctta tacagatatg taataattaa tgacttcgaa attaatgagg gtaaatactt
    32581 ttttgcagtg gttattgtct tttttaagat aattggcttc ccactttttt tctgtgttct
    32641 ttcggctgtg ttgccaacat tggttcaaac aaagtttgtt cttgcgacta aagctatcaa
    32701 gattgatttt tcagtattaa accctgttaa agggttaaaa aaaatattta gtataaagac
    32761 aataaaagaa tttttcaaaa gcattctgct tcttattatt ctagcattaa caacctattt
    32821 cttttggatt aatgaccgaa aaataatttt ttctcaggtg ttttctagtg ttgatggctt
    32881 atatcttatt tggggggggc tatttaagga tataatatta tttttcttag cattttctat
    32941 ttttgttatt attcttgact ttgtgattga gttcatttta tacatgaaag atatgatgat
    33001 ggataaacag gagataaaaa gagaatatat agagcaagag ggacactttg agacaaagtc
    33061 gagaaggcgt gagttgcata tcgagattct ttcagagcag actaaatctg atatacgtaa
    33121 ttcaaaatta gtggtaatga acccgactca tattgcaatt ggtatttatt ttaatccaga
    33181 aatagcgcct gcacctttta tttctctcat tgaaactaac cagtgtgcct tggctgtcag
    33241 aaaatatgca aatgaagttg gtataccaac tgtgcgtgat gtgaaattag ctagaaaact
    33301 atataaaaca catacaaaat atagttttgt tgattttgaa cacttggatg aagtcctacg
    33361 tcttattgtt tggcttgagc aggttgaaaa cactcattaa taagtaaagg agatgtgtta
    33421 tatgggagtt aatttctgta ataaaatagg tattgatcag tctgaatttg aaatagaatc
    33481 ttccatcatt aactccattg ctaatgaggt attgaaccca atatctttcc ttagcaacaa
    33541 ggatataata aatgttttac tcagaaagat ttcatctgaa tgtgacctgg ttagaaaaga
    33601 catttatcgt tgtgctcttg agttggtcgt tgaaaaaaca cctgatgatt tataatcatt
    33661 cataataact cttttgttga tataaatatt tttgttgaag atatttatgt agtcacagga
    33721 tcaattgtag aaaattgtta tgtttttgtt aggaactgaa ctaaataata tatgataaga
    33781 cagcaaaaac gactgaccat aatccttctt ttattaggag ttgataagag agactattca
    33841 tcctgtaatg ttaaaactct gttatatagt attcgcgatt atgcaaagtc tgtaaatgat
    33901 catgagatac taaccgagag taatcgttta ttatctcatt gcatttcaga tagtaacgga
    33961 gctttcttta aaagtagtaa atacgttccc cttaagtact tacgtaaaag gagaatagca
    34021 cgaaagatac caaatgatta gcactttgct agtaagcttg ctggtaaact atattgaccg
    34081 ttgggtttgt tttgagactg taatttaaat tgtgtaattg cctgtttttg atatgtttac
    34141 tccaacaacg gagacaggta aattatggac gaaaagaagc ttaaagccct tgcggctgaa
    34201 ctggctaaag gcctcaaaac tgaggccgac ctcaatcagt tttcccgtat gctgacgaaa
    34261 tatcccggct cttaaaacga tagtggctca ggctttcatt tttcagcgtt ccccagaag
//
LOCUS       DAJVUK010000026        33947 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.026, whole genome shotgun sequence.
ACCESSION   DAJVUK010000026 DAJVUK010000000
VERSION     DAJVUK010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33947
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.026"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(270..482)
                     /gene="rpmE"
                     /locus_tag="OQQ57_001187"
     CDS             complement(270..482)
                     /gene="rpmE"
                     /locus_tag="OQQ57_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HCS1956019.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            685..2883
                     /gene="priA"
                     /locus_tag="OQQ57_001188"
     CDS             685..2883
                     /gene="priA"
                     /locus_tag="OQQ57_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HCS1956020.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     VVVSVSDVSELPLNELKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNACPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPMFPGVPIS
                     RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWILGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            3039..4064
                     /gene="cytR"
                     /locus_tag="OQQ57_001189"
     CDS             3039..4064
                     /gene="cytR"
                     /locus_tag="OQQ57_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HCS1956021.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4156..5115
                     /gene="ftsN"
                     /locus_tag="OQQ57_001190"
     CDS             4156..5115
                     /gene="ftsN"
                     /locus_tag="OQQ57_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HCS1956022.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5208..5738
                     /gene="hslV"
                     /locus_tag="OQQ57_001191"
     CDS             5208..5738
                     /gene="hslV"
                     /locus_tag="OQQ57_001191"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HCS1956023.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            5748..7079
                     /gene="hslU"
                     /locus_tag="OQQ57_001192"
     CDS             5748..7079
                     /gene="hslU"
                     /locus_tag="OQQ57_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HCS1956024.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL"
     gene            7146..8072
                     /gene="menA"
                     /locus_tag="OQQ57_001193"
     CDS             7146..8072
                     /gene="menA"
                     /locus_tag="OQQ57_001193"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HCS1956025.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDRPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFILGIFLSQWAA"
     gene            8165..8650
                     /gene="rraA"
                     /locus_tag="OQQ57_001194"
     CDS             8165..8650
                     /gene="rraA"
                     /locus_tag="OQQ57_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HCS1956026.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(8735..8980)
                     /gene="zapB"
                     /locus_tag="OQQ57_001195"
     CDS             complement(8735..8980)
                     /gene="zapB"
                     /locus_tag="OQQ57_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HCS1956027.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9406..10251
                     /gene="glpF"
                     /locus_tag="OQQ57_001196"
     CDS             9406..10251
                     /gene="glpF"
                     /locus_tag="OQQ57_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HCS1956028.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVKEKETTTPSE
                     QKASL"
     gene            10274..11782
                     /gene="glpK"
                     /locus_tag="OQQ57_001197"
     CDS             10274..11782
                     /gene="glpK"
                     /locus_tag="OQQ57_001197"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HCS1956029.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE"
     gene            11917..12927
                     /gene="glpX"
                     /locus_tag="OQQ57_001198"
     CDS             11917..12927
                     /gene="glpX"
                     /locus_tag="OQQ57_001198"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HCS1956030.1"
                     /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAVLGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            13024..13770
                     /gene="fpr"
                     /locus_tag="OQQ57_001199"
     CDS             13024..13770
                     /gene="fpr"
                     /locus_tag="OQQ57_001199"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HCS1956031.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(13775..14203)
                     /gene="uspD"
                     /locus_tag="OQQ57_001200"
     CDS             complement(13775..14203)
                     /gene="uspD"
                     /locus_tag="OQQ57_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HCS1956032.1"
                     /translation="MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK"
     gene            complement(14230..14529)
                     /locus_tag="OQQ57_001201"
     CDS             complement(14230..14529)
                     /locus_tag="OQQ57_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HCS1956033.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
     gene            complement(14741..15181)
                     /locus_tag="OQQ57_001202"
     CDS             complement(14741..15181)
                     /locus_tag="OQQ57_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCS1956034.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     CFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN"
     gene            15282..15881
                     /locus_tag="OQQ57_001203"
     CDS             15282..15881
                     /locus_tag="OQQ57_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HCS1956035.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            15989..16756
                     /gene="tpiA"
                     /locus_tag="OQQ57_001204"
     CDS             15989..16756
                     /gene="tpiA"
                     /locus_tag="OQQ57_001204"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HCS1956036.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(16811..17566)
                     /gene="cdh"
                     /locus_tag="OQQ57_001205"
     CDS             complement(16811..17566)
                     /gene="cdh"
                     /locus_tag="OQQ57_001205"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HCS1956037.1"
                     /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR"
     gene            complement(17673..18662)
                     /gene="sbp"
                     /locus_tag="OQQ57_001206"
     CDS             complement(17673..18662)
                     /gene="sbp"
                     /locus_tag="OQQ57_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter
                     substrate-binding protein Sbp"
                     /protein_id="HCS1956038.1"
                     /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVMRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(18982..19944)
                     /gene="pfkA"
                     /locus_tag="OQQ57_001207"
     CDS             complement(18982..19944)
                     /gene="pfkA"
                     /locus_tag="OQQ57_001207"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014072359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HCS1956039.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGSMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(20125..21027)
                     /gene="fieF"
                     /locus_tag="OQQ57_001208"
     CDS             complement(20125..21027)
                     /gene="fieF"
                     /locus_tag="OQQ57_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HCS1956040.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMIDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(21175..21699)
                     /gene="cpxP"
                     /locus_tag="OQQ57_001209"
     CDS             complement(21175..21699)
                     /gene="cpxP"
                     /locus_tag="OQQ57_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HCS1956041.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQRS
                     TQRSTQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENA
                     VRAQAEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKS
                     SSLKLLSSSNSRSQ"
     gene            21849..22547
                     /gene="cpxR"
                     /locus_tag="OQQ57_001210"
     CDS             21849..22547
                     /gene="cpxR"
                     /locus_tag="OQQ57_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HCS1956042.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            22544..23917
                     /gene="cpxA"
                     /locus_tag="OQQ57_001211"
     CDS             22544..23917
                     /gene="cpxA"
                     /locus_tag="OQQ57_001211"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HCS1956043.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(24023..24697)
                     /gene="yiiM"
                     /locus_tag="OQQ57_001212"
     CDS             complement(24023..24697)
                     /gene="yiiM"
                     /locus_tag="OQQ57_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HCS1956044.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS
                     RRLWGK"
     gene            complement(24846..25811)
                     /gene="kdgT"
                     /locus_tag="OQQ57_001213"
     CDS             complement(24846..25811)
                     /gene="kdgT"
                     /locus_tag="OQQ57_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HCS1956045.1"
                     /translation="MRKSRGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVSI
                     LAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAG
                     LSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASF
                     EPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGL
                     LGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPMLIAEMVPAFKP
                     MAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(26090..26710)
                     /gene="sodA"
                     /locus_tag="OQQ57_001214"
     CDS             complement(26090..26710)
                     /gene="sodA"
                     /locus_tag="OQQ57_001214"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HCS1956046.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            26994..28028
                     /gene="rhaT"
                     /locus_tag="OQQ57_001215"
     CDS             26994..28028
                     /gene="rhaT"
                     /locus_tag="OQQ57_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HCS1956047.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLLNTEGGRMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(28025..28891)
                     /gene="rhaR"
                     /locus_tag="OQQ57_001216"
     CDS             complement(28025..28891)
                     /gene="rhaR"
                     /locus_tag="OQQ57_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HCS1956048.1"
                     /translation="MAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDF
                     CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKL
                     NLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVSFANEMAELLFGQ
                     LVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ
                     FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
                     PSQWRHLNSQKD"
     gene            complement(28947..29783)
                     /gene="rhaS"
                     /locus_tag="OQQ57_001217"
     CDS             complement(28947..29783)
                     /gene="rhaS"
                     /locus_tag="OQQ57_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HCS1956049.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF
                     LQ"
     gene            30071..31483
                     /gene="rhaB"
                     /locus_tag="OQQ57_001218"
     CDS             30071..31483
                     /gene="rhaB"
                     /locus_tag="OQQ57_001218"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HCS1956050.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHS
                     QNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINP
                     NDDRFINPEAMCSEIQAACRETAQPIPESDAELAQLRGEDFSQLHIVGGGCQNTLLNQ
                     LCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDS
                     EIAHYVAQLHSTRQTKELCA"
     gene            31480..32739
                     /gene="rhaA"
                     /locus_tag="OQQ57_001219"
     CDS             31480..32739
                     /gene="rhaA"
                     /locus_tag="OQQ57_001219"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HCS1956051.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNFHAIYLESD
                     TPVSRDQIKPEHFKNWGEWAKANQLGLDFNPSCFSHPLSADGFTLSHPDDSIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISKKLNP
                     AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPQLLLHVSRPVRWDCDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR
                     IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC
                     QRHDTPAGSEWLESVRAYEKEILSQRG"
     gene            32822..33646
                     /gene="rhaD"
                     /locus_tag="OQQ57_001220"
     CDS             32822..33646
                     /gene="rhaD"
                     /locus_tag="OQQ57_001220"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HCS1956052.1"
                     /translation="MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAP
                     YKDNVHAQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGY
                     HILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAV
                     FTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSG
                     STLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL"
     gene            33656..>33947
                     /gene="rhaM"
                     /locus_tag="OQQ57_001221"
     CDS             33656..>33947
                     /gene="rhaM"
                     /locus_tag="OQQ57_001221"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HCS1956053.1"
                     /translation="MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIY
                     LDKARNLLFATVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSEL"
BASE COUNT         8326 a         8853 c         8798 g         7970 t
ORIGIN      
        1 gaacaggcca cgccggtggg agcaccaatg cgcaccccgg ctgaaccctg aacaatgcta
       61 ccgccatact gcgtcatgtc gccctgacgc gccgccggtt ttccgctcat cgtaaaatcc
      121 ttttgaaata aataagaacc agaagcctag cgccagtcaa caacaggaaa tgataatgag
      181 ttaacacccc ggaatttttc agaatttata aaaggcaaaa ttcaggcaca aaaaaagcgc
      241 cgtgcggcgc ttttttcgga aatccggtct tatttgctgc ccgggatgtt gaaacgcttg
      301 ttgaagcggt caacacggcc accggtagca acatcacgct gtttgccagt gaagaacggg
      361 tggcacttgc tgcacacgtc gaggttcagg tcatgaccaa cagtggagcg gattttcatt
      421 acgttaccgc aagagcagct agcagtaatt tcttcgtatt tcgggtgaat atcttttttc
      481 atgggaaaac ctcggtttaa ggccgcgtcg ctcttccagc cctaacgcca gacaccacgc
      541 gatgttaaaa gtatagcttc aatacgatca tttcgtacga aggcgcgaaa tcatacagaa
      601 attaaccagc gtatgcaaac tgatccgcac tcttctacgg caatgtgtat actaacccac
      661 cgaatttcaa gtcaggatga tgctatgccc gttgcccacg ttgccttgcc cgttccgctt
      721 cctcgtacct ttgactatct gctgccagaa ggcatgacgg ttaaagccgg gtgtcgcgtg
      781 cgcgtgccgt ttggcaaaca gcaggagcgc atcggggttg tggtgtcagt tagcgatgtc
      841 agtgagctgc cgcttaacga gctgaaagcg gtagtggaag tgctggacgt tgagccggta
      901 tttactcact ccgtctggcg gttactgctc tgggcggcag attactatca tcatccgatt
      961 ggcgatgtgc tgtttcatgc cttgccgatt ttactgcgcc aggggcggcc tgcggcgaac
     1021 gcgccgatgt ggtactggtt tgccactgaa caaggccagg cggtggatct gaacagcctg
     1081 aaacgctccc ccaagcaaca acaggcgctg gcggcgttac ggcaaggcaa aatctggcgc
     1141 gaccaggtcg ccacgctcga atttaatgat gccgcgttgc aggcgctacg caaaaaaggt
     1201 ctgtgtgatt tagcaagtga aacaccagag tttagcgact ggcgaacgaa ctatgccgtt
     1261 tctggtgagc ggttgcgatt gaataccgaa caggccaccg ccgttggcgc aattcatagc
     1321 gcggcagata ctttttctgc ctggctgctg gcgggcgtta ccggttccgg taaaacggag
     1381 gtttatctca gtgtactgga aaacgtgctc gctcagggca aacaggcgct ggtgatggtg
     1441 ccggaaatcg gcctgacacc gcaaactatc gcccgttttc gtgaacgttt taatgccccc
     1501 gtggaagttc tgcattccgg cctgaacgac agcgagcggc tttctgcgtg gttgaaagcg
     1561 aaaaatggcg aggcggcgat tgtgatcggc acccgctccg cgctgtttac gccgtttaaa
     1621 aatctcggcg tgattgtcat tgatgaagag cacgacagct cctacaagca gcaggaaggc
     1681 tggcgctatc atgcccgcga cctggcggtg tatcgtgcgc acagcgagca aatcccgatt
     1741 attcttggct ccgcaacgcc cgcgctggaa acgttatgca acgtccagca gaaaaaatac
     1801 cgcctgctgc gcctgacccg tcgggcaggg aatgcttgtc cggcaattca acatgtgctg
     1861 gatttaaaag gtcagaaggt gcaggcaggt ctggctccgg cgttaatcac ccgtatgcgc
     1921 cagcatttac aggccaacaa tcaggttatc ctctttctta atcgtcgggg ttttgcgcct
     1981 gcgctgctgt gccacgactg cggctggata gccgaatgcc cacgttgcga tcactactac
     2041 acgctgcatc aggcgcaaca gcatttgcgc tgtcaccact gtgacagtca gcgtccggtg
     2101 ccgcgccagt gcccttcctg cggttccacg cacctggtcc ccgtggggct gggcaccgaa
     2161 cagcttgaac agacgcttgc gccgatgttc cccggcgtgc ccatttcacg tatcgaccgc
     2221 gataccacca gccgcaaagg ggcactggaa cagcaactgg cggaagtgca tcgcggcggc
     2281 gcgaggattt tgatcggcac acaaatgctg gcgaaaggtc accactttcc ggatgtgacg
     2341 ctggtggcgt tactggatgt ggacggcgcg ctgttttctg ccgattttcg ctcggcagaa
     2401 cgtttcgccc agctttacac ccaggtcgcc ggtcgtgccg ggcgtgcggg taaacagggc
     2461 gaagtggtgc tgcaaacgca ccatccggaa catcctctgt tgcaaacgtt gctctataaa
     2521 ggctacgacg cctttgccga acaggcgctg gctgagcgac gcatgatgca gctgccgccg
     2581 tggaccagcc atgtgattgt gcgtgcggaa gatcataaca atcagcacgc gccgctgttc
     2641 ctgcaacaac tgcgtaatct gatcctttcc agcccgctgg cagacgacaa actgtggatt
     2701 ctcggcccgg ttccggctct ggcacctaag cgtggtggcc gctggcgctg gcagatcttg
     2761 ttgcagcacc cttcccgcgt gcgcttgcaa cacatcatta gtggtacgct ggcgcttatt
     2821 aatacaatac cggattcccg caaggtgaaa tgggtgttgg atgtcgatcc catcgaaggc
     2881 taatgcgcaa acgttgcgag gcggatcgaa aaattcaata ttcatcacac ttttcatgaa
     2941 aattctgtaa ccgttttcac gcgctatctg ctaaaaatgt tgccgatgtg aagtaaacat
     3001 ggatgtagta cgcctgacgt accaggcgag gagtgagtgt gaaagcgaag aagcaggaaa
     3061 ctgccgcgac catgaaagac gttgccctca aggcaaaagt ctctacagcg actgtctccc
     3121 gagcattaat gaatcccgat aaagtctccc aggccacccg taatcgggtt gaaaaagcgg
     3181 cccgggaagt gggttattta ccgcagccta tggggcgcaa cgtcaagcgt aatgaatccc
     3241 gcaccattct ggtgattgtc ccggatatct gcgatccctt ctttagcgaa attattcgcg
     3301 gtatcgaagt tacggcggca aatcacggat atctggtgct gattggcgac tgtgcgcatc
     3361 aaaatcagca ggaaaaaacc tttatcgatt tgatcatcac caagcaaatt gatggcatgt
     3421 tgctgctggg ttcaaggctg ccgtttgatg ccagcattga ggaacagcgt aatctgccgc
     3481 cgatggtgat ggcgaacgaa tttgcaccgg aactggagct gcctaccgtt catatcgaca
     3541 atctgaccgc cgcatttgat gcagtaaatt atttatatga gcaagggcat aaacggattg
     3601 gctgtatagc cggtcccgaa gagatgccac tgtgtcacta ccgcctgcaa ggctatgttc
     3661 aggcgctgcg tcgctgcgga attatggttg atccacaata catcgcccgt ggcgacttca
     3721 ccttcgaagc cggaagcaaa gcaatgcaac agctgcttga tcttccacaa ccgcctactg
     3781 cagtcttctg ccatagcgat gtgatggcgc tcggcgcact ttctcaggca aaacgccagg
     3841 ggctgaaagt cccggaagac ctttccataa tcggttttga taacatcgac ctgacgcaat
     3901 tttgtgatcc gccgctgaca accatcgcgc agccgcgtta cgaaatcggt cgggaagcta
     3961 tgctgttatt gcttgatcaa atgcaggggc aacacgttgg cagtggctct cgtttaatgg
     4021 actgcgaact tatcatccgg ggatcaacac gcgcgttacc ttaaagtaaa cctttaagac
     4081 tgccgtgact ggtcaaaggc ccgccgctta agtaacatgg cgggctgacg aacgaataaa
     4141 tacagcgaaa cgatagtggc acaacgagat tatgtacgcc gcagccaacc ggcaccttcg
     4201 cggcgaaaaa agagcacctc acggaaaaag caacgaaatc tgcctgcggt ttctcccgct
     4261 atggtcgcta ttgctgccgc cgttcttgtg acctttatcg gtggtctgta cttcattacg
     4321 catcacaaga aagaagagtc cgagacgctg caaagccaga aagtgaccgg aaacggacta
     4381 ccaccaaaac cagaagaacg ctggcgctac attaaagagc tggaaagtcg ccagccgggt
     4441 gtgcgtgcgc ccacagaacc ttctgccggt ggtgaagtga aaacgccgga gcaactgaca
     4501 ccagaacaac gtcagcttct tgaacaaatg caggctgata tgcgccagca gccaacgcag
     4561 ctggttgagg ttccgtggaa tgaacagacg ccggaacagc gtcagcaaac gctacaacgc
     4621 cagcgtcagg cgcagcaatt agcggagcag caacgcctgg ctcagcagtc gcgtacgact
     4681 gaacaaagct ggcagcagca gacgcgtacg tcgcaagccg cgccggtaca ggcgcaaccg
     4741 cgccagtcta aaccagcttc tactcagcag ccgtaccagg atctgctgca aacccctgcg
     4801 cacacgaccg cgcagtcgaa gccgcagcaa gctgcaccgg ttgctcgtgc cgctgacgcg
     4861 ccaaaaccga cggcggagaa aaaagacgaa cgccgctgga tggtgcagtg cggttcgttc
     4921 agaggcgcgg aacaggcaga gacggtacgt gctcagctgg cgttcgaagg atttgactcg
     4981 aaaatcacca ccaacaatgg ctggaatcgt gtggtcattg gcccggtgaa aggcaaagag
     5041 aacgcagaca gcaccctcaa tcggttgaag atggcgggtc atacaaactg cattcggctc
     5101 gccgccgggg gttgaaaccc tcaaaatccc ccccatctat aattgcatta tgcctcgtac
     5161 ttttgtacgg ggtttgtact ctgtattcgt aaccaagggg tcagctcgtg acaactatag
     5221 taagcgtacg ccgtaacggc catgtggtca tcgctggtga tggtcaggcc acgttgggca
     5281 ataccgtaat gaaaggcaac gtgaaaaagg tccgccgtct gtacaacgac aaagtcatcg
     5341 cgggctttgc gggcggtact gcggatgctt ttacgctgtt cgaactgttt gaacgtaaac
     5401 tggaaatgca tcagggccat ctggttaaag ccgccgttga gctggcaaaa gactggcgta
     5461 ccgatcgcat gctgcgcaaa cttgaagcac tgctggcagt cgcggatgaa actgcatcgc
     5521 ttatcatcac cggtaacggt gacgtggtgc agccagaaaa cgatcttatt gctatcggct
     5581 ccggcggccc ttacgcccag gctgcggcgc gcgcgctgtt agaaaacact gaacttagcg
     5641 cccgtgaaat tgctgaaaag gcgttggata ttgcaggcga catttgcatc tataccaacc
     5701 atttccacac catcgaagaa ttaagctaca aagcgtaagg atctcccatg tctgaaatga
     5761 ccccacgcga aatcgtcagc gaactggata agcacatcat cggccaggac aacgccaagc
     5821 gttctgtggc gattgctctg cgtaaccgct ggcgtcgcat gcagctcaac gaagagctgc
     5881 gccatgaagt gaccccgaaa aatatcctga tgatcggccc gaccggtgtc ggtaaaactg
     5941 aaatcgcccg tcgtctggct aagctggcga atgcgccgtt catcaaagtt gaagcgacca
     6001 aattcaccga agtgggctat gtcggtaagg aagtggattc tattattcgc gatctgaccg
     6061 atgccgccgt gaaaatggta cgcgtccagg ctatcgagaa aaaccgttat cgcgctgaag
     6121 aactggcaga agaacgtatt ctcgacgtgc tgatcccacc tgctaaaaac aactggggac
     6181 agaccgaaca gcagcaggaa ccgtccgctg ctcgtcaggc attccgcaaa aaactgcgtg
     6241 aaggccagct tgatgacaaa gaaatcgaga tcgatcttgc cgcagcaccg atgggcgttg
     6301 aaattatggc tcctccaggc atggaagaga tgaccagcca gctgcagtcc atgttccaga
     6361 acctgggcgg ccagaagcaa aaagcgcgta agctgaaaat caaagacgcc atgaagctgc
     6421 tgattgaaga agaagcggcg aaactggtga acccggaaga gctgaagcaa gacgctatcg
     6481 acgctgttga gcagcacggg atcgtgttta tcgacgaaat cgacaaaatc tgtaagcgcg
     6541 gcgagtcttc cggtccggat gtttctcgtg aaggcgttca gcgtgacctg ctgccgctgg
     6601 tagaaggttg caccgtttcc accaaacacg ggatggtcaa aactgaccac attctgttta
     6661 tcgcttctgg cgcgttccag attgcgaaac cgtctgacct aatcccggaa ctgcaaggtc
     6721 gtctgccaat ccgcgttgaa ctgcaggcac tgaccaccag cgacttcgag cgtattctga
     6781 ccgagccgaa tgcctctatc accgtgcagt acaaagcact gatggcgact gaaggcgtaa
     6841 atatcgagtt taccgactcc ggtattaaac gcatcgcgga agcggcatgg caggtgaacg
     6901 aatctaccga aaacatcggt gctcgtcgtt tacacactgt tctggagcgt ttaatggaag
     6961 agatttccta cgacgccagc gatttaagcg gtcaaaatat cactattgac gcagattatg
     7021 tgagcaaaca tctggatgcg ttggtggcag atgaagatct gagccgtttt atcctataat
     7081 cgcgttcaat cattttcatc attgtttgat ggggctgaaa ggccccattt ttattggcgc
     7141 gtattatgac tgaacaacaa attagccgaa ctcaggcgtg gctggaaagt ttacgaccta
     7201 aaaccctccc cctcgccttt gctgcaatta tcgtcgggac ggcgctggca tggtggcaag
     7261 gtcattttga tccgctggtc gccctgctgg cactgattac cgccgggcta ttacagatcc
     7321 tttctaacct cgccaatgat tacggcgatg cggtaaaagg cagcgataga cctgaccgca
     7381 ttgggccgct acgcggcatg caaaaagggg tcattaccca gcaagagatg aaacgggcgc
     7441 tcattattac cgtcgtgctc atctgtctct ccgggctggc actggttgca gtggcgtgcc
     7501 atacgctggc tgattttgtc ggtttcctga ttcttggcgg gttgtcgatc attgccgcta
     7561 tcacctacac cgtgggcaat cgtccttatg gttatatcgg tctgggggat atttccgtac
     7621 tggttttctt tggctggtta agcgtcatgg ggagctggta tttacaggct catacattga
     7681 ttccggcact gatccttccg gcgaccgcat gcggcctgct ggcaacggca gtactgaaca
     7741 ttaataacct gcgtgatatc aatagcgacc gagaaaacgg caaaaacacg ctggtggtgc
     7801 gcttaggtga agtgaacgcg cgtcgttatc atgcctgcct gctgatgggc tctctggtat
     7861 gtctggcgct gtttaatctc ttttcgctgc atagcctgtg gggctggctg ttcctgctgg
     7921 cggcaccgtt gctggtgaag caagcccgtt atgtgatgcg ggaaatggac ccggtggcga
     7981 tgcgaccgat gctggaacgc actgtcaagg gggcgttact gactaacctg ctgtttattt
     8041 tagggatatt cctaagccag tgggcagcat aactgacaaa tatcaattaa caattgatga
     8101 ttttgccaac agcccacata gcgcgatata ctgaaaattc tcgcagcaac tgaatgttaa
     8161 gcctatgaaa tacgatactt ccgagctttg tgacatctat caagaagatg ttaacgtcgt
     8221 ggaaccgctg ttctccaact ttggcggacg ggcgtcgttt ggcggacaaa taatcacggt
     8281 aaaatgtttc gaggacaacg ggttgctgta cgatctgctc gaacagaatg gccgtggtcg
     8341 tgttcttgtc gtcgatggcg gtggttctgt tcgtcgcgca ctggtcgatg ctgaactggc
     8401 gcgtctggca gtacaaaatg aatgggaagg tctggttatt tacggcgcgg tgcgtcaggt
     8461 agatgacctg gaagagttgg atatcggcat ccaggcgatg gcggcaattc cggttggtgc
     8521 cgctggcgaa ggcattggcg aaagcgatgt ccgcgtcaat tttggcggtg taaccttctt
     8581 ctccggcgac catctttatg ccgacaatac cgggattatt ctttcagaag atccgctgga
     8641 tattgaatga taagaaaggc accgcaaggt gccttttttc tgcgttacct gttggcctac
     8701 acagtaaaga aattacgcga aagatgaagc gtaatcagac ctcttccatg cgacccagca
     8761 gggcctgcag acgttcctgc cagccgttct gctgttcttt cagatggttg ttctcacgct
     8821 ccagctcttc gcgctgatgc tgggcatttt gaacttcctg cgacagtgag ttgttttttt
     8881 ctttcagctc ttcgatttcc atctgcaaca gagtgatggt atcaatcgcc tgctgtactt
     8941 ttgcttccag tttctcaaac acttctaatg acattgtcat acctctcctg aattgcaagg
     9001 cgttgatgga taaaaaatcc tcgtcccgat taccggtgac gccttaataa atacgagcgc
     9061 actttagtta gctccgattg tatgaagccg cgccatcgct gtccagcggc acgccttgca
     9121 gattacggtt tgccacactt ttcatccttc tcctggtgac ataatccaca tcaatcgaaa
     9181 atgttaataa atttgttgcg cgaatgatct aacaaacatg catcatgtac aatcagatgg
     9241 aataaatggc gcgataacgc tcattttatg acgaagcaca cacattttaa gttcgatatt
     9301 tctcgttttt gctcgttaac gataagttaa cagcatgcct acaagcatcg tggaggtccg
     9361 tgactttcac gcatacaaca aacattaact cttcaggatc cgattatgag tcaaacatca
     9421 accttgaaag gccagtgcat tgctgaattc ctcggtaccg ggttgttgat ttttttcggt
     9481 gtgggttgcg ttgcagcact aaaagtcgct ggtgcgtctt ttggtcagtg ggaaatcagt
     9541 gtcatttggg gactgggggt ggcaatggct atctacctga ccgcaggggt ttccggcgcg
     9601 catcttaatc ccgctgttac cattgcattg tggctgtttg cctgtttcga caagcgcaaa
     9661 gttattcctt ttatcgtttc acaagttgcc ggcgctttct gtgctgcggc tttagtttac
     9721 gggctttact acaatttatt tttcgacttc gagcagactc atcacattgt tcgcggcagc
     9781 gttgaaagtg ttgatctggc aggcactttc tctacttacc ctaatcctca tatcaatttt
     9841 gtgcaggctt tcgcagttga gatggtgatt accgctattc tgatggggct gatcctggcg
     9901 ttaacggacg atggcaacgg tgtaccacgc ggccctttgg ctcccttgct gattggtcta
     9961 ctgattgcgg tcattggcgc atctatgggc ccattgacgg gttttgccat gaacccagcg
    10021 cgtgacttcg gtccgaaagt ctttgcctgg ctggcgggct ggggcaatgt cgcctttacc
    10081 ggcggcagag acattcctta cttcctggtg ccgctttttg gccctatcgt tggcgcgatt
    10141 gtaggtgcat ttgcctaccg caaactgatt ggtcgccatt tgccttgcga tatctgtgtt
    10201 gtgaaagaaa aggaaaccac aactccttca gaacaaaaag cttcgctgta atatgactac
    10261 gggacaatta aacatgactg aaaaaaaata tatcgttgcg ctcgaccagg gcaccaccag
    10321 ctcccgcgcg gtcgtaatgg atcacgatgc caatatcatt agcgtgtcgc agcgcgaatt
    10381 tgagcaaatc tacccaaaac caggttgggt agaacacgac ccaatggaaa tctgggccac
    10441 ccaaagctcc acgctggtag aagtgctggc gaaagccgat atcagttccg atcaaattgc
    10501 agctatcggt attacgaacc agcgtgaaac cactattgtc tgggaaaaag aaaccggcaa
    10561 gcctatctat aacgccattg tctggcagtg ccgtcgtacc gcagaaatct gcgagcattt
    10621 aaaacgtgac ggtttagaag attatatccg cagcaatacc ggtctggtga ttgacccgta
    10681 cttttctggc accaaagtga agtggatcct cgaccatgtg gaaggctctc gcgagcgtgc
    10741 acgtcgtggt gaattgctgt ttggtacggt tgatacgtgg cttatctgga aaatgactca
    10801 gggccgtgtc catgtgaccg attacaccaa cgcctctcgt accatgttgt tcaacatcca
    10861 taccctggac tgggacgaca aaatgctgga agtgctggat attccgcgcg agatgctgcc
    10921 agaagtgcgt cgttcttccg aagtatacgg tcagactaac attggcggca aaggcggcac
    10981 gcgtattcca atctccggga tcgccggtga ccagcaggcc gcgctgtttg gtcagttgtg
    11041 cgtgaaagaa gggatggcga agaacaccta tggcactggc tgctttatgc tgatgaacac
    11101 tggcgagaaa gcggtgaaat cagaaaacgg cctgctgacc accatcgcct gcggcccgac
    11161 tggcgaagtg aactatgcgt tggaaggtgc ggtgtttatg gcaggcgcat ccattcagtg
    11221 gctgcgcgat gagatgaagt tgattaacga cgcctacgat tccgaatatt tcgccaccaa
    11281 agtgcaaaac accaatggtg tgtatgtggt tccggcattt accgggctgg gtgcgccgta
    11341 ctgggacccg tatgcgcgcg gggcgatttt cggtctaact cgtggggtga acgctaacca
    11401 cattatacgc gcgacgctgg agtctattgc ttatcagacg cgtgacgtgc tggaagcgat
    11461 gcaggccgac tctggtatcc gtctgcacgc cctgcgcgtg gatggtggcg cagtagcaaa
    11521 caatttcctg atgcagttcc agtccgatat tctcggcacc cgcgttgagc gcccggaagt
    11581 gcgcgaagtc accgcattgg gtgcggccta tctcgcaggc ctggcggttg gcttctggca
    11641 gaacctcgac gagctgcaag agaaagcggt gattgagcgc gagttccgtc caggcatcga
    11701 aaccactgag cgtaattacc gttacgcagg ctggaaaaaa gcggtcaaac gcgcgatggc
    11761 gtgggaagaa cacgacgagt aatgtaaatg ccggatgaag cgtttatgcc gcatccggta
    11821 gtcctgaaac gtgcgggggc aaccccgcac acatcaataa tcccaccctt cccctgtgct
    11881 acacttcgcg ccattcctta ctgcttagag tttgctatga gacgagaact tgccatcgaa
    11941 ttttcccgcg tcaccgaatc tgcggcgctg gctggctaca aatggttagg acgcggcgat
    12001 aaaaacaccg cggacggcgc ggcggtaaac gccatgcgta ttatgctcaa ccaggtcaac
    12061 attgacggca ccatcgtcat tggtgaaggt gaaatcgacg aagcaccgat gctctacatt
    12121 ggtgaaaaag tcggtactgg tcgcggcgac gcggtagata ttgctgttga tccgattgaa
    12181 ggcacgcgca tgacggcgat gggccaggct aacgcgctgg cggtgctggc agtaggcgat
    12241 aaaggctgct tcctcaatgc gccggatatg tatatggaga agctgattgt cgggccggga
    12301 gccaaaggca ccattgatct gaacctgccg ctggcggata acctgcgcaa tgtagcggcg
    12361 gtgctcggca aaccgttgag cgaactgacg gtaacgattc tagctaaacc acgccacgat
    12421 gccgttatcg ctgaaatgca gcaactcggc gtacgcgtat ttgctattcc ggatggcgac
    12481 gttgcggcct caattctcac ctgtatgcca gacagcgaag ttgacgtgct gtacggtatt
    12541 ggtggcgcgc cggaaggcgt agtttctgcg gcggtgatcc gcgcattaga tggcgacatg
    12601 aacggtcgtc tgctggcgcg tcatgacgtc aaaggcgaca acgaagagaa tcgtcgcatt
    12661 ggcgagcagg agctggcacg ctgcaaagcg atgggcatcg aagccggtaa agtattgcgc
    12721 ctgggcgata tggcgcgcag cgataacgtc atcttctctg ccaccggtat taccaaaggc
    12781 gatctgctgg aaggcattag ccgcaaaggc aatatcgcga ctaccgaaac gctgctgatc
    12841 cgcggcaagt cacgcaccat tcgccgcatt cagtccatcc actatctgga tcgcaaagac
    12901 ccggaaatgc aggtgcacat cctctgattg atttgatcga ttgagccttc cagtccttcg
    12961 ggactggaat ttttttgttc ggagaacgaa gataaggcaa gtcaatcaaa acaggagaaa
    13021 aacatggctg attgggtaac aggcaaagtc actaaagtgc agaactggac cgacgccctg
    13081 tttagtctca ccgttcacgc ccccgtgctt ccgtttaccg ccgggcaatt caccaagctt
    13141 ggccttgaaa tcgacggcga acgcgtccag cgcgcctact cctatgttaa ctcgcccgat
    13201 aatcccgatc tggagtttta cctggtcacc gtccccgatg gcaaattaag cccacgattg
    13261 gcggcactga aaccaggcga tgaagtgcag gtggttagcg aagcagctgg cttctttgtt
    13321 ctggatgaag taccagattg cgaaacgcta tggatgctgg caaccggtac agcgattggc
    13381 ccttatttat cgattctgca actaggcaaa gatttagatc gcttcaaaaa tctggtcctg
    13441 gttcacgccg cacgttatgc cgccgactta agctatttgc cactgatgca agaactggaa
    13501 aaacgctacg aaggcaaact gcgcattcag acggtggtca gtcgggaaac ggcagcgggg
    13561 tcgctcaccg gacggatacc ggcattaatt gaaagtgggg aactggaaag cgcgattggc
    13621 ctgccgatga ataaagaaac cagccatgtg atgctgtgcg gcaatccaca gatggtgcgc
    13681 gatacacaac agttgctgaa agagacccgg cagatgacga aacatttacg tcgccgaccg
    13741 ggccatatga cagcggagca ttactggtaa gcggttactt atcgataaac ggcacgatga
    13801 gcaaatccgc actcatctta ttgatcatcc cgcgatatgc tggcatcaaa cggttgataa
    13861 atgagtgatg atgaccacag acaaggaggt cgcactgctc tttttgcata atttccagca
    13921 gtgtttccgg catttctccg cgttcaatac gcagttttgt cttcggccat tgaatatttt
    13981 tcgtcagttt atacagcttg ttatccgact tattcttcaa caattgaaga atatcttctg
    14041 ttgcagggaa gtagataccc ggatacaact cgcttaagcc atcatcaata tgaattaacg
    14101 tcaggtgagc gtcattatgt ctggcgagct ccagagcttt attcaccagt aaggcatctt
    14161 cttcattccc ggaaattgcc acgccaatgt gtttataagc catgtttaac tccttctaaa
    14221 gcaactccat caagctaacg aacgcagtga taactcaaaa ataatcatct cggcctggca
    14281 tgagaaagtg aaggccgcat caagctcaac ttgcccctcc agatccttaa tcttgtaggc
    14341 cacgctggcc ccttcatctg cagaggatgc agcggcggca agctctttca gtttggtcat
    14401 aaaagactct gcttcttcgc gggtggcaaa aaagcgcgaa aacttactgg tacagttgtc
    14461 gttatcaatc accgtaccga tatcaatcgc acatccttta gtactgcatt tatctacgac
    14521 atctttcata gggcacctct gtatattcgc ctctctgtcg attacgactt aagaataatg
    14581 cgccgttaag ggaagaacaa acaagtaatg atcttatgga ttaccatttt ttttgatatt
    14641 gcttaaggtg aagagttcag aaggattttc cgggtattgt catttgcatc gtggaaataa
    14701 caatcccgga aaaaaatagc agtaagagat atattaaagg ttaattactt gatttattgt
    14761 cggctttata cttcacatcc tgagtatctt taccatattt attttcgcct tgtgtgccaa
    14821 caaacgcacc aagatcgata agcatcatca ccagaatcaa cgtcgggaca aaacacccca
    14881 ccgcccattg ccagacaccc ggtaaaatcg cccagttacc cgccagcagc atccacgcca
    14941 caatcatcag aaatgcccat gcgccggaac gcccgcgatc atgcaagcgc ttaacagtta
    15001 ctgccgctgt tggccaaagc aagcacacaa ggcaaaacgc cgcggtctga atatcgagta
    15061 aatttttacc cgccagtgag aaaagcacca gcatgcctgc gaaccacagg cctatccaaa
    15121 tccagaaatc acggcgtcca atacgccctt taaatgagaa taaccattgc tgtatggtca
    15181 tgtaagttcc ttgatggttg tcttttccag gattctaccc ttttgacaag ggcgacagat
    15241 atcgttttaa tcggagccag tcataacaaa aggtactgtc aatgaagcca gggtgtacgc
    15301 tgttttttct cttatgttct gcattaaccg ttacaacaac ggcgcatgca caaacaccag
    15361 atacggcaac gaccgcgcct tatctgctgg ctggagcccc tactttcgat ctctccatca
    15421 gccagtttcg agaagacttt aacagccaga atcctagcct gccactgaac gaatttcgtg
    15481 ccatcgacag cagtcccgac aaagccaatc tcactcgtgc tgcaagtaaa attaacgaga
    15541 acttgtatgc ttctacagcg ctggagcgcg gtaccttaaa aatcaaaagc attcaaatga
    15601 cctggctacc catccagggg ccagagcaaa aagcagcgaa agcgaaagct caggaataca
    15661 tggcagcagt gatccgcaca ctcaccccat taatgaccaa aacacaaagc cagaaaaaac
    15721 tgcagtcgct gctaacggcg gggaaaaaca aacgttatta caccgagaca gaaggtgcac
    15781 tgcgttatgt tgtcgcggac aacggcgaaa aggggctgac cttcgctgtt gaaccgatta
    15841 agctggcgct atctgaatcg cttgaaggtt tgaataaatg acaaaaagca aagcctttgt
    15901 gccgatgaat ctctatactg tttcacagac ctgctgccct gcggggcggc catcttcctt
    15961 tattcgctta taagcgtgga gaattaaaat gcgacatcct ttagtgatgg gtaactggaa
    16021 actgaacggc agccgccaca tggttcacga gctggtttct aacctgcgta aagagctggc
    16081 aggtgttgct ggctgtgcgg ttgcaatcgc accaccggaa atgtacatcg atatggcgaa
    16141 gcgcgaagct gaaggcagcc acatcatgct gggtgcgcaa aacgtggacc tgaacctgtc
    16201 cggcgcattc accggtgaaa cctctgctgc tatgctgaaa gacatcggcg cacagtacat
    16261 catcatcggc cactctgaac gtcgtactta ccacaaagag tctgacgaac tgatcgcgaa
    16321 aaaattcgcg gtgctgaaag agcagggtct gactccggtt ctgtgcatcg gtgaaaccga
    16381 agctgaaaac gaagcgggca aaactgaaga agtttgcgca cgtcagatcg acgcggtact
    16441 gaaaactcag ggtgctgcgg cattcgaagg tgcggttatc gcttacgaac ctgtatgggc
    16501 aatcggtact ggcaaatctg caactccggc tcaggcacag gctgttcaca aattcatccg
    16561 tgaccacatc gctaaagttg acgctaacat cgctgaacaa gtgatcattc agtacggcgg
    16621 ctctgtaaac gcgtctaacg ctgcagaact gtttgctcag ccagacatcg acggcgcgct
    16681 ggttggcggt gcgtctctga aagctgacgc tttcgcagta atcgttaaag ctgcagaagc
    16741 ggctaaacag gcttaagtct gacaggtgcc ggatttcata tccggcactt actttcctta
    16801 actcttcgcc ttaacgcaaa atctcacact gatgatcctg aatttcctcg gctgaagcac
    16861 ggttaagcgt cagtagattt cgttgtgtcg ccagcaatac aaatgagtta tcactctgcc
    16921 gtaccatcgc cagcccgtag cttcccatat gttcccgcgc ctcaggtact tcttctgcca
    16981 gcatcataaa tgggctgcgt tgtaccagtt cgctttccgt tacccgacgc gccaggtatt
    17041 catgcccgcg caaaccacct ggcagtggca accagcggct gctgatgttc gccagattgt
    17101 tatccagttg ttcgcgcaca tcaggacgaa tacaagagat atgaatatga aaatggtttt
    17161 gcgtacgccc ggtgcgggag ttgatcgcca aagaaaccgc gcgatcggga accggctggc
    17221 cgtacttttt gctcataaaa tcacgcgcct gccaggccaa ccaaaagaag ttcggcgttg
    17281 aaggatcggt caacaaagga ctttcagtac cgttaatacg atacgttggc atcaacagat
    17341 attgcagtgg gccattaaga tcttttaaaa ccacgtatcc ggcattgggt ttgacttccg
    17401 cacatggcga aggattttga ttttgctgct gattgggcaa acattcctca aggacaatct
    17461 tacgtaatgt atccgactct tcaccggtta atttccagta accaataccg gcagccacaa
    17521 cggcgataac tatcatcacc aaaaaaagaa gacccgcttt tttcatcttt ttttccctgt
    17581 acctcaaaga gatgcaaggg taacgcaaaa tcgtgacaaa taaaaaaccc ggtcgcgaga
    17641 aaccaccggg tttgataatt atcctgggga aatcagcgtt tgctgatctg atcgaacgta
    17701 ccgccgttag caaaatgctc tttttgcgct ttcgtccagc cgccgaactc ttcatcaatg
    17761 gtgaataact tcagctttgg aaacgcattt tcgtactttt tcgctacttc agcgtcgcgc
    17821 ggacggtagt agtttttcgc ggcaatttcc tgaccttctg gcgagtagag atatttcagg
    17881 taggcttccg ccacctcttt ggtgcctttt ttctcgacca ctttatcgac caccgacacg
    17941 gttggctctg cgaggataga ctcactcggc gtgacgattt cgaatttatc tttccccagt
    18001 tcattcgctg ccagcagagc ttcgttttcc caggcgatca gtacatcgcc aatcccgcgc
    18061 tcgacaaagg tgttagtgga gccgcgcgcg ccagaatcca gaacttcgac gtttttatac
    18121 agtgcccgaa caaaatcctg tgcttttgcc tgatcgttgt tgttgtgatg cagcgcgtag
    18181 ccccaggcag ccaagtagtt ccagcgtgcg ccaccagagc ttttcggatt aggcgtgatc
    18241 accgaaacac ccggtttaat cagatcgttc cagtcatgga tctgcttcgg attgccctta
    18301 cgcaccagga aaacaatggt ggaagtgtac ggtgcggagt tatccggcag acgtttgatc
    18361 cactctttat caatccgccc gcgttccgca attgcgtcca cgtcataggc cagagccagc
    18421 gtgacaacat cagcttcaat accgttgatt accgacgtcg cttgtttacc tgaaccaccg
    18481 tgtgactgac gcatcaccac gttatcacca gtttgctgtt tccagtgggc gctgaatgcc
    18541 ttgttgtact gttcgtacaa ttcgcgcgtt ggatcatatg aaacgttaag aagctgaata
    18601 tcctttgcca taacgctggt tgccgccagc aaaaatgtta accctacgcc ccacttgttc
    18661 atcgcccgac tctcttatgt tgtgttgtga tgagcaaagc gtgccagaag gttaaccaaa
    18721 cattaaagaa taaaaaaaga ttggctataa cttgcgggta tatgttgagg gattaaaaag
    18781 gcggaagaaa tccgcctcat attgctgaca aagtgcgctt tgtccatgcc ggatgcggcg
    18841 cgaacgcctt atccggccta caaaagtttg caaattcaat aaattgcaga attcatgtag
    18901 gcctgataag cgaagcgcat caggcatttt tgcttctgtc atcggtttca ggctaaagga
    18961 atctgccttt ttccgaaatc attaatacag ttttttcgcg cagtccagcc agtcaccttt
    19021 gaacggacgc ttcatgtttt cgatagcgtc gatgatgtcg tggtgaacca gctgttcgtt
    19081 ctggatacct acacaacgac cgccgtaacc tgccagcagc agatcgatag cgtaagcgcc
    19141 catacgggaa gccagaatac ggtcgtaagg caccggagaa ccaccgcgct ggatgtggcc
    19201 cagcacagtt gcgcgggttt cacgacctgt ttctttctcg atgaaatgcg ccagttcgtc
    19261 aacatcacac atatgttcgg taatcgccac gatcgcgtgt tttttacctt tcgcgatacc
    19321 cgctttgatt tcgtttacca ggtcttcacg gctgaattca acttccggaa ccacaacgaa
    19381 ttcacagcca ccggcaatgg ccgcagccaa cgtcagatcg ccacaataac ggcccatcac
    19441 ttccaccacg gaaatacgct ggtgagaaga agaggtgtca cgcagacggt cgatcgcttc
    19501 tacaacggtg ctcagcgcag tgaagaaacc gatagtgtag tcagtgcctt tgatgtcgtt
    19561 gtcgatagtg cccggcagac cgatgcacgg gaagcccatt tcggtcagac gcattgaacc
    19621 catgtaggaa ccgtcaccgc cgataaccac cagcgcgtcg ataccacgtt ttttcaggtt
    19681 ttcgatagcc acggcgcgga tgttctcgtc gcggaattcc gggaaacgcg cagaaccgag
    19741 gaacgtaccg ccacggttga tcatgtcaga cacgctgtaa cggtctagct gtaccatacg
    19801 gtcttcatac agacccagat agccgtcata aatacccatt acttccagac cttctgtcag
    19861 cgcagaacga acaaccccgc gaattgcggc gttcatgcct ggcgcatcac cgccgcttgt
    19921 caacacaccg attttcttaa tcatgactac ctctgaactt tggaatgcaa aatgaaatct
    19981 gttgccggaa gtcttcttgc acatcgaagt gatccaacga atgtgcaaat agtataacaa
    20041 tcacttcctg ctgaattgat tcaggtcagg ccaaatggcg gtattttata cacaaaatgc
    20101 gggtctggct ctcttttata ctgattatga aagcatagac cgtttaccct ccctgggtac
    20161 gacggaacag gggtcctgat ggataattac atccgatccc ggaaaacgcc gtaaaatagc
    20221 ctgctctacc tgatccgcca ccatatgtgc ctgaaccaaa ggcagagagt cttccatttc
    20281 caaatgaatc tgaataaagc gggtcggccc tgactgccgc gtgcgaagat cgtgagcgcc
    20341 gctaacaccc ggccaggaag tcacgatatc aataatttct tgccgttcct catcaggcaa
    20401 tgcgcgatcc agtaatgact gtaccgcctc atatcccatg cgtaacgcgc tatataaaat
    20461 atagatgccg attcccaatg caaacagagc atcggcgcga tgccagccgt accaggacaa
    20521 ccccagcgcc agcagaattg cgccgttcat cataacatca gactggtaat gtagcatatc
    20581 agcccgcacc gcctggcttt gcgtccggcg caccacccaa cgctgaaacg agacaaggat
    20641 aatcgtacaa attagcgcca caattgtcac gataaccccg acgcctggat ctatcatcgg
    20701 tgttggagat atcagatgtt gaatacccgt caaaaacagg aatagtgccg aaccggagat
    20761 aaacatactt tgcgccagcg ccgcgaggga ctctgcttta ccgtgaccaa acgagtgatt
    20821 atcgtcggca ggttgcaggg aatatcgcac caccagtaaa ttcgtcaacg acgcgccgat
    20881 atccaccagc gaatccacca gcgcggcgag aatactcacc gacccggtat accaccatgc
    20941 aaaaatttta atcagcaata gcaacgaagc catcgccgtc gcagcaatcg ccgcccgact
    21001 gaccagccgt ccataagatt gattcataaa tactcccgct atcaactgac gctagtataa
    21061 cggaagcaaa tcatctgcaa tgcattaagc agcaggcaaa ttgaggataa aaaaaacccc
    21121 acatcatgtg ggggaagaca gggatggtgt ctatggcaag gaaaacaggg tttactactg
    21181 ggaacgtgag ttgctactac tcaatagctt caacgatgaa cttttttgcc attgcgtcac
    21241 gtcacgcaac tgctccattc gttgttgatg tttctcgttt aaaaccgctt gctgctccgg
    21301 cgttaacagg cgatacattt ggttgcggac ttttgccatc tcaacctgac gagcaatttg
    21361 ctcattcgcc attttttctg cctgtgcgcg cacagcgttt tcatcaaaat tttctgcggt
    21421 gacaaggcga tgcattgtct ccagttcgct aacattaaca ggaggctgtt cgtgccgggc
    21481 ctgttgcata agatctcgca tctgctgacg ctgatgttcg gttaaactta tgccgtcgaa
    21541 catatggctc tgcgtactgc gctgcgtact gcgctgcgta ctgcgctgcg taagttcttc
    21601 acccggatgc cagttatcgc ctgaaccgac ttcagcagcg tggcttaatg aactgactgc
    21661 cagcgttgaa gccatgacgg cagcggtaac tatgcgcatc atttgctccc aaaatctttc
    21721 tgtcgcgatt caacgataga gagtttacga ttcaggctgc aaacatgcgt cagggggtgt
    21781 aaaacaacgt aaagtcatgg attagcgacg tctgatgacg taatttctgc ctcggaggta
    21841 tttaaacaat gaataaaatc ctgttagttg atgatgaccg agagctgact tccctattaa
    21901 aggagctgct cgagatggaa ggcttcaacg tgattgttgc ccacgatggg gaacaggcgc
    21961 ttgatcttct ggacgacagc attgatttac ttttgcttga cgtaatgatg ccgaagaaaa
    22021 atggtatcga cacattaaaa gcacttcgcc agacacacca gacgcctgtc attatgttga
    22081 cggcgcgcgg cagtgaactt gatcgcgttc tcggccttga gctgggcgca gatgactatc
    22141 tcccgaaacc gtttaatgat cgtgagctgg tggcacgtat tcgcgcgatc ctgcgccgtt
    22201 cgcactggag cgagcaacag caaaacaacg acaacggttc accgacactg gaagttgatg
    22261 ccttagtgct gaatccaggc cgtcaggaag ccagcttcga cgggcaaacg ctggagttaa
    22321 ccggtactga gtttaccctg ctctatttgc tggcacagca tctgggtcag gtggtttccc
    22381 gtgaacattt aagccaggaa gtgttgggca aacgcctgac gcctttcgac cgcgctattg
    22441 atatgcacat ttccaacctg cgtcgtaaac tgccggatcg taaagatggt cacccgtggt
    22501 ttaaaacctt gcgtggtcgc ggctatctga tggtttctgc ttcatgatag gcagcttaac
    22561 cgcgcgcatc ttcgccatct tctggctgac gctggcgctg gtgttgatgt tggttttgat
    22621 gttacccaag ctcgattcac gccagatgac cgagcttctg gatagcgaac agcgtcaggg
    22681 gctgatgatt gagcagcatg tcgaagcgga gctggcgaac gatccgccca acgatttaat
    22741 gtggtggcgg cgtctgttcc gggcgattga taagtgggca ccgccaggac agcgtttgtt
    22801 attggtgacc accgaaggcc gcgtgatcgg cgctgaacgc agcgaaatgc agatcattcg
    22861 taactttatt ggtcaggccg ataacgccga tcatccgcag aagaaaaagt atggccgcgt
    22921 ggaactggtc ggtccgttct ccgtgcgtga tggcgaagat aattaccaac tttatctgat
    22981 tcgtccggcc agcagttctc aatccgattt cattaactta ctgtttgacc gcccgctatt
    23041 actgctgatt gtcaccatgt tggtcagtac gccgctgctg ttgtggttgg cctggagtct
    23101 ggcaaaaccg gcgcgtaagc tgaaaaacgc tgccgatgaa gttgcccagg gaaacttacg
    23161 ccagcacccg gaactggaag cggggccaca ggaattcctt gccgcaggtg ccagttttaa
    23221 ccagatggtc accgcgctgg agcgcatgat gacctctcag cagcgtctgc tttctgatat
    23281 ctctcacgag ctgcgcaccc cgctgacgcg tctgcaactg ggtacggcat tactgcgccg
    23341 tcgtagcggt gaaagcaagg aactggagcg tattgaaacc gaagcgcaac gtctggacag
    23401 catgatcaac gatctgttgg tgatgtcacg taatcagcaa aaaaacgcgc tggttagcga
    23461 aaccatcaaa gccaaccagt tgtggagtga agtgctggat aacgcggcgt tcgaagccga
    23521 gcaaatgggc aagtcgttga cagttaactt cccgcctggg ccgtggccgc tgtacggcaa
    23581 tccgaacgcc ctggaaagtg cgctggaaaa cattgttcgt aatgctctgc gttattccca
    23641 tacgaagatt gaagtgggct ttgcggtaga taaagacggt atcaccatta cggtggacga
    23701 cgatggtcct ggcgttagcc cggaagatcg cgaacagatt ttccgtccgt tctatcggac
    23761 cgatgaagca cgcgatcgtg aatctggcgg tacaggattg gggctggcga ttgttgaaac
    23821 cgccattcag cagcatcgtg gctgggtgaa ggcagaagac agcccgctgg gcggtttacg
    23881 gctggtgatt tggttgccgc tgtataagcg gagttaaact ccgcatttgt aggcaggata
    23941 aggcgtttac gccgcatccg gcatttgagc aggatgcctg atgcgacgct gatagcgtct
    24001 tatcaggcct acactccggg ggttattttc cccacaaccg gcgggaaaaa tcttcgatct
    24061 tgccgctcag tcggcgcttt tgcatcgtcc gcgtccagct tttcgataac ccggcggcgg
    24121 agagtaaacg gtgatactga tcgtcatcaa acggcatatg ccatgcgatg gcggcagcct
    24181 cctgcacggt cacatcgctg acacgggaaa ccaactccag cggcgcgtcc gcagacactt
    24241 tccctggcgc tatcacgcta tacaaccacc ccaccttacc tgtgttttgc atcaactgcg
    24301 ctatatcgct gatatcaaaa tggtaattga gtttatagca aggcgagcgc ggctggctga
    24361 cctgaattaa tgcctctccc cagcggaaaa tatcgcccat ataaacatta ctttccgtca
    24421 ggccgtcggt tgagaggttt tcaccaaacg caggcgcaac aaacaactcc gcctgttccg
    24481 gaaattcccg cgcccagtag agataatgct cacgaggata atgacacagc gctctgtctg
    24541 gcccaccatg aacctttttc tccgcctgct cgtcaccttc cagccccagc tccgtcagca
    24601 tcaactcacc atcaacctgg attttggcaa ttgcgctggg tttgccttcg ggataagcct
    24661 gaatcttgcc tgtgtataca tcaaccggat atcgcatctg ttccctctcc acgagaaatt
    24721 tccccattag accatattta ttttatgtca ggcgtgctgt tttcgcggta agtatccagg
    24781 caggaactca atagcaaacc ggacgaacgt tagttcatcc ggctgtgggg attaaggaag
    24841 caggtttatt tcaccgtacc taaaatttcg attttcgctg ctctggcttt gactttacgt
    24901 gaccagatag aggtaagaat tggcaccaga atcgaagtca caatgaccgc cgtcgctacc
    24961 agcgaagttg ctgccggagc catcggttta aacgcaggca ccatttctgc aatcagcata
    25021 ggtgtcgcta ccgcggcccc tgcggaactg gaagcggcaa ttccggcagt gccatcgcca
    25081 ccgccaatca atttatcggc gataatcaac ggaataccgg tcacgataat tactgccaca
    25141 cccaacagga tccccagcaa accagtctgg gcaatcacag tcaaatcaat ggtattgccc
    25201 agcgcgaagg caaagaatgg aatcagcgtt tgcaccgctt tgctgaaaaa ttctcgtaat
    25261 tcagggtcaa ggttccccag ggcaaagccc accaggaacg gtaatactgc gccgacgaaa
    25321 acatgcggtt caaacgaggc aatccctgca gtgcccagaa taatcatcgt catgagcggc
    25381 ccggactcca acgacatcaa cacaaatgcc ccagcttctt cttttgtgcc gtactgctgc
    25441 atgatggaag cgtaaagtcc gccattggtc atatccatcg ccgccaccag cgccagcgtt
    25501 gaaagtccgg caaagaatcc aacttcaaca ccatgttccg gaataatgcg cgaggcaatt
    25561 gccgcaacca cccacgcgac ggcaattttt gttaccacca gcgtaccgga tttacgcaat
    25621 accgttcccg tcgcgcttaa ttttattgac gcccccatgc aaaaaaacca caccgccaga
    25681 atggacaccg taccggtaat catcccgttg gtgaatgatc caaaatattt ccccgccccc
    25741 ggcgagaagg tgtggcacag tgcgccaagg aatagcggga cgagcatcat ccccccccgg
    25801 gattttctca atcgagcgtt ttatctgcat ttccatcacc tgtcggcata tttttaaggg
    25861 ctgatgcgta attcctcaat ggagcatcag tgttgatgga aacgaagata gacattcatt
    25921 taatcaataa aagtgatcaa aaccacatca attgaaacgc tgttttattt ttatcggatc
    25981 attgttttta ttttgaaatt gatcacaaaa aaaccaccgc cgttggcgat ggttcatttt
    26041 ttaagctgat atgcggcgta aacgcctcat tgcagcaggc ggcaaatgat tattttttcg
    26101 ccgcgaaacg tgccgctgct tcatcccagt tcaccacgtt ccagaactct ttgatgtagt
    26161 ccggacggcg gttctggaat ttcaggtagt aagcatgttc ccacacatcc aggcccagaa
    26221 tcgggaagcc ggaagcgcca gaaatagctt cacccatcag cggggaatcc tggttagcag
    26281 tagaaaccac cgccagttta tcgcctttca gcaccagcca tgcccagccg gaaccaaagc
    26341 gggaagctgc cgctttctca aattctgctt tgaagttatc aacggagccg aagtcacgtt
    26401 cgatagccgc tttcaggtca ccctgtaagg tggtgccttt tttcagacct ttccagaaca
    26461 ggctgtggtt agcgtgaccg ccagcgttgt tgcgcagtac ggttttcttg tctgctggca
    26521 gctggtccag tttggtgatc agctcttcaa ccggcaggtt ggcaaattct ggcaggcttt
    26581 ccagcgccgc gttggcgttg ttgacgtagg tctgatggtg tttggtgtgg tggatttcca
    26641 tggtctgctt atcgaagtgc ggttccaggg catcgtaagc atacggcagg gatggcaggg
    26701 tatagctcat attcatctcc agtattgtcg ggcggccgat tgttaatgcg cgtaagcagt
    26761 tggttcatta tagttaatta aatgatattg aaaatgatta tcaatgccgt acttttcgta
    26821 agggtatggt tttgcaggaa aattcccgag atgtgaagca aatcacccac ttaatgccgt
    26881 gattgccagt aaatcgacaa cggcggcaac aggcgaaagg ttaatcgaca gcacgatttt
    26941 tacactcatc tcgtcggaga tgtgacgcga cgaaaaatga tgaggataag aagatgagta
    27001 acgcgattac gatggggata ttttggcatt tgatcggcgc ggccagtgca gcctgttttt
    27061 acgctccgtt caaaaaagta aaaaaatggt catgggaaac catgtggtca gttggtggga
    27121 ttgtttcgtg gattattctg ccgtgggcca tcagcgccct gttactgccg aatttctggg
    27181 cgtattacag ctcgtttagt ctctctacgc tgctgcctgt ttttctgttc ggcgctatgt
    27241 gggggatcgg taatatcaac tacggcctga ccatgcgtta tctcggcatg tcgatgggaa
    27301 ttggcatcgc cattggcatt acgttgattg tcggtacgct gatgacgcca attatcaacg
    27361 gcaatttcga tgttctgctt aataccgaag gcggacgcat gacgttgctc ggcgttctgg
    27421 tggcgctgat tggtgtaggg attgtgactc gcgccgggca gttgaaagag cgcaaaatgg
    27481 gcattaaagc cgaagagttc aacctgaaaa aagggctggt gctggcggtg atgtgcggca
    27541 ttttctctgc cggtatgtct tttgcgatga acgccgcaaa accgatgcat gaagccgctg
    27601 ccgcactggg cgtcgatcca ctgtatgtcg ctctgccaag ctatgtcatc atcatgggcg
    27661 gcggcgcgat catcaacctc ggtttctgct tcattcgtct ggcaaaagtg aaggatttgt
    27721 cgctaaaagc cgacttctcg ctggcaaaac cgctgatcat tcacaatgtg ttactctcag
    27781 cactgggcgg gttgatgtgg tatctgcaat tctttttcta tgcctggggc cacgcccgca
    27841 ttccggcgca gtatgactac atcagttgga tgctgcatat gagtttctat gtattgtgcg
    27901 gcggtatcgt cgggctggtg ctgaaagagt ggaacaatgc aggtcgccgt ccggtaacgg
    27961 tgttgagcct cggttgtgtg gtgattattg tcgccgccaa catcgtcggc atcggcatgg
    28021 cgaattaatc tttctgcgaa ttgagatgac gccactggct gggcgtcatc ccggtttccc
    28081 gggtaaacac caccgaaaaa tagttactat cttcaaagcc acattcggtc gaaatatcac
    28141 tgattaacag gcggctatgc tggagaagat attgcgcatg acacactctg acctgccgca
    28201 gatattgatt gatggtcatt ccagtctgct ggcgaaattg ctgacgcaaa acgcgctcac
    28261 tgcacgatgc ctcatcacaa aatttatcca gcgcaaaggg acttttcagg ctagccgcca
    28321 gccgggtaat cagcttatcc agcaacgttt cgctggatgt tggcggcaac gaatcactgg
    28381 tgtaacgatg gcgattcagc aacatcacca actgcccgaa cagcaactca gccatttcgt
    28441 tagcaaacga cacatgctga ctactttcat gctcaagctg accgataacc tgccgcgcct
    28501 gcgccatccc cacgctacct aagcgccagt gtggttgccc tgcgctggcg ctaaatcccg
    28561 gaatcgctcc ctgccagtca agattcagct tcagccgctc cgggcaataa ataatattct
    28621 gcaaaaccag atcgttaacg gaagcgtagg agtgtttatc gtcagcatga atgtaaaaga
    28681 gatcgccacg ggtaatgcga taagggcgat cgttgagtac atgcagacca ttaccgcgcc
    28741 agacaatcac cagctcacaa aaatcatgtg tatgttcggc aaaaacatct tgcggataac
    28801 ggtcagccac agcgactgcc tgctggtcgc tggcaaaaaa atcatctttg agaagtttta
    28861 actgatgcgc caccgtggct acctcggcca gagaacgaag ttgattattc gcaatatggc
    28921 gtacaaatac gttgagaaga ttcgcgttat tgcagaaagc catcccgtcc ctggcgaata
    28981 tcacgcggtg accagttaaa ctctcggcga aaaagcgtcg aaaagtggtt actgtcgctg
    29041 aatccgcagc gataggcgat gtcagtaacg ctggcctcgc tgtgacgtag cagatgtcgg
    29101 gccttcatca gtcgcaggcg gttcaggtaa cgctgaggcg tcagtcccgt ttgctgctta
    29161 agctgccgat gtagcgtacg cagtgaaaga gaaaattgat ccgccacggc atcccaattc
    29221 acctcatcgg caaaatggtc ctccagccag gccagaagca agttgagacg tgatgcgctg
    29281 ttttccaggt tctcctgcaa actgctttta cgcagcaaga gcagtaattg cataaacaag
    29341 atctcgcgac tggcggtcga gggtaaatca ttttcccctt cctgctgttc catctgtgca
    29401 accagctgtc gcacctgctg caatacgctg tggttaacgc gccagtgaga cggatactgc
    29461 ccatccagtt cttgtggcag caactgattc agcccggcga gaaactgaaa tcgatccggc
    29521 gagcgataca gcacattggt cagacacaga ttatcggtat gttcatacag atgccgatca
    29581 tgatcgcgta cgaaacagac cgtgccaccg gtgatggtat agggctgccc attaaacaca
    29641 tgaatacccg tgccatgttc gacaatcaca atttcatgaa aatcatgatg atgttcagga
    29701 aaatccgcct gcgggagccg gggttctatc gccacggacg cgttaccaga cggaaaaaaa
    29761 tccacactat gtaatacggt catactggcc tcctgatgtc gtcaacacgg cgaaatagta
    29821 atcacgaggt caggttctta ccttaaattt tcgacggaaa accacgtaaa aaacgtcgat
    29881 ttttcaagat acagcgtgaa ttttcaggaa atgcggtgag catcacatca ccacaatgaa
    29941 gcaaattgtg aacatcatca cgttcatctt tccctggttg ccaatggccc attttcctgt
    30001 cagtaacgag aaggtcacga attcaggcgc tttttagact ggtcgtaatg aaattcagca
    30061 ggatcacatt atgacctttc gcaattgtgt cgccgtcgat ctcggcgcat ccagtgggcg
    30121 cgtgatgctg gcgcgttacg agcgtgaatg ccgcagcctg acgctgcgcg aaatccatcg
    30181 ttttaacaat ggcctgcata gccagaacgg ttatgtcacc tggaatgtgg atagcctgga
    30241 aagtgccatt cgccttggat taaacaaggt gtgcgaggaa gggattcgta tcgatagcat
    30301 tgggattgat acctggggcg tggactttgt gctgctcgac caacagggtc agcgtgtggg
    30361 cctgcccgtt gcttatcgcg atagccgctc caatggccta atggcgcagg cacagcaaca
    30421 actcggcaaa cgcgatattt atcaacgtag cggcatccag tttctgccct tcaatacgct
    30481 ttatcaactg cgtgcgctga cggagcaaca acctgaactt attccacaca ttgctcacgc
    30541 tctgctgatg ccggattact tcagctatcg cctgaccggc aagatgaact gggaatatac
    30601 caatgccacc accacacaac tggtcaatat caatagcgac gactgggacg agtcgctact
    30661 ggcgtggagc ggggccaaca aagcctggtt tggtcgcccg acgcatccgg gtaatgtcat
    30721 tgggcactgg atttgcccgc agggtaatga gattccggtg gtcgccgttg ccagccatga
    30781 taccgccagc gcggttatcg cctcgccgtt aaacggttca cgcgctgctt atctctcttc
    30841 tggcacctgg tcattgatgg gcttcgaaag ccagacgcca tttaccaatg acacggcgct
    30901 ggcagccaac ataaccaatg aaggcggggc ggaaggtcgc tatcgggtgc tgaaaaatat
    30961 tatgggctta tggctgcttc agcgagtgct tcaggagcgg caaatcaacg atctcccggc
    31021 gcttatcgcc gcgacacagg cacttccggc ctgccgcttc atcatcaatc ccaatgacga
    31081 tcgctttatt aatcctgagg cgatgtgcag cgaaattcag gctgcgtgtc gggaaacggc
    31141 gcaaccgatc ccggaaagtg atgctgaact ggcgcagcta cgcggtgaag atttctcgca
    31201 actgcatatt gtcggcggcg gctgccagaa cacgctgctc aaccagctat gtgccgatgc
    31261 ctgcggtatt cgggtgatcg ccgggcctgt tgaagcctcg acgctcggca atatcggcat
    31321 ccagttaatg acgctggatg aactcaacaa tgtggatgat ttccgtcagg tcgtcagcac
    31381 caccgcgaat ctgaccacct ttacccctaa tcctgacagt gaaattgccc actatgtggc
    31441 gcagcttcac tctacacgac agacaaagga gctttgcgca tgaccactca actggaacag
    31501 gcctgggagc tggcgaaaca gcgtttcgcg gcggtgggga ttgatgtcga ggaggcgctg
    31561 cgccaacttg atcgtttacc cgtttcaatg cactgctggc agggcgatga tgtttccggt
    31621 tttgaaaacc cggaaggttc gctgaccggg gggattcagg ccacaggcaa ttatccgggc
    31681 aaagcgcgta atgccagtga gctacgtgcc gatctggaac aggctatgcg gctgattccg
    31741 gggccgaaac ggcttaattt ccatgccatc tatctggaat cagatacgcc agtctcgcgc
    31801 gaccagatca aaccagagca cttcaaaaac tggggtgaat gggcgaaagc caatcagctc
    31861 ggtctggatt ttaacccctc ctgcttttcg catccgctaa gcgccgatgg ctttacgctc
    31921 tcgcatcccg acgacagcat tcgccagttc tggattgatc actgcaaagc cagccgtcgc
    31981 gtttcggcct attttggcga gcaactcggc acaccatcgg tgatgaacat ctggatcccg
    32041 gatggtatga aagatatcac cgttgaccgt ctcgccccgc gtcagcgtct gctggcagca
    32101 ctggatgagg tgatcagcaa gaagctaaac cctgcgcacc atatcgacgc cgttgagagc
    32161 aaattgtttg gcattggcgc agagagctac acggttggct ccaatgagtt ttacatgggg
    32221 tatgccacca gccgccagac tgcgctgtgc ctagacgccg ggcacttcca cccgactgaa
    32281 gtgatttccg acaagatttc cgccgccatg ctgtatgtgc cgcagttgct gctgcacgtc
    32341 agccgtccgg ttcgctggga ctgcgatcac gtagtgctgc tggatgatga aacccaggca
    32401 attgccagtg agattgtgcg tcacgatctg tttgaccggg tgcatatcgg ccttgacttc
    32461 ttcgatgcct ctatcaaccg cattgccgcg tgggtcattg gtacacgcaa tatgaaaaaa
    32521 gccctgctgc gtgcgttgct ggaacctacc gctgagctgc gcaagctgga agcggcgggc
    32581 gattacactg cgcgtctggc actgctggaa gagcagaaat cgttgccgtg gcaggcggtc
    32641 tgggaaatgt attgccaacg tcacgatacg ccagcaggta gcgaatggct ggagagcgtg
    32701 cgggcttatg aaaaagaaat tttgagccag cgtgggtaaa cactgccgga tgcggcgcga
    32761 gcgccttatc cggcctacgg gtcgtgcatc tgacaacacc gaatttacag gaacacagaa
    32821 catgcaaaac attacccagt cctggtttgt ccagggaatg atcaaagcca ccaccgatgc
    32881 ctggctgaaa ggctgggacg aacgcaacgg cggcaacctg acgctgcgcc tggatgacgc
    32941 cgatatcgcg ccttataaag acaacgtcca tgcacaaccg cgctatatcc cgctcagcca
    33001 gcccatgcct ttactggcaa atacaccgtt tattgtcacc ggctccggca aattcttccg
    33061 taacgtccag ctcgatcctg cagctaactt aggcgtcgta aaagtcgaca gcgatggcgc
    33121 gggctaccat attctctggg ggttaaccaa cgaagccgtc ccgacatccg aactcccggc
    33181 gcactttctc tcccactgcg agcgcattaa agccaccaac ggtaaagatc gggtgatcat
    33241 gcactgccac gccaccaacc tgatcgccct cacctatgta ctggaaaacg acaccgcggt
    33301 ctttactcgc caactgtggg aaggcagcac cgagtgtctg gtggtattcc cggatggcgt
    33361 tggcattctg ccgtggatgg tgcccggcac ggacgaaatc ggccaggcga ccgcacaaga
    33421 gatgcaaaaa cattcgctgg tgttgtggcc cttccacggc gtcttcggca gcgggtcgac
    33481 gttggatgaa acattcggtt taatcgacac cgcagaaaaa tcagcacaag tattagtgaa
    33541 ggtttattcg atgggcggca tgaaacagac catcagccgt gaagagttga tagcgctcgg
    33601 caagcgcttc ggcgttacac cactagccag tgcgctggcg ctgtaaggag caaacatgat
    33661 ccgcaaagcc tttgtcatgc aggttaaccc cgacgcccac gaagagtatc agcgtcggca
    33721 taaccccatc tggccggaac tggaagcagt gttgaaatct cacggtgcgc ataactacgc
    33781 catttacctc gacaaagcgc gtaatctgct gtttgccacg gtagagattg aatctgaaga
    33841 acggtggaat gcggtagcca gtactgatgt ttgccaacgt tggtggaaat atatgaccga
    33901 tgttatgccc gctaacccgg ataacagccc ggtgagtagc gagctgc
//
LOCUS       DAJVUK010000027        32956 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.027, whole genome shotgun sequence.
ACCESSION   DAJVUK010000027 DAJVUK010000000
VERSION     DAJVUK010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32956
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.027"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..257
                     /locus_tag="OQQ57_001222"
     CDS             <1..257
                     /locus_tag="OQQ57_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HCS1956054.1"
                     /translation="LDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVV
                     MTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
     gene            267..1641
                     /gene="gspE"
                     /locus_tag="OQQ57_001223"
                     /pseudo
     CDS             267..1641
                     /gene="gspE"
                     /locus_tag="OQQ57_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
     gene            1631..2833
                     /gene="hofC"
                     /locus_tag="OQQ57_001224"
     CDS             1631..2833
                     /gene="hofC"
                     /locus_tag="OQQ57_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HCS1956055.1"
                     /translation="MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLS
                     LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAGQHPSKQWQALLQSLAH
                     DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK
                     SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW
                     LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
                     GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTG
                     EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(2868..3911)
                     /gene="guaC"
                     /locus_tag="OQQ57_001225"
     CDS             complement(2868..3911)
                     /gene="guaC"
                     /locus_tag="OQQ57_001225"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HCS1956056.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSDQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNNL"
     gene            complement(4067..4111)
                     /locus_tag="OQQ57_001226"
     CDS             complement(4067..4111)
                     /locus_tag="OQQ57_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956057.1"
                     /translation="MIIKTLKMSARKRN"
     gene            4136..4756
                     /gene="coaE"
                     /locus_tag="OQQ57_001227"
     CDS             4136..4756
                     /gene="coaE"
                     /locus_tag="OQQ57_001227"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HCS1956058.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            4756..5499
                     /gene="zapD"
                     /locus_tag="OQQ57_001228"
     CDS             4756..5499
                     /gene="zapD"
                     /locus_tag="OQQ57_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HCS1956059.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDSENGQVPERLDFELACC"
     gene            5509..5706
                     /gene="yacG"
                     /locus_tag="OQQ57_001229"
     CDS             5509..5706
                     /gene="yacG"
                     /locus_tag="OQQ57_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HCS1956060.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSSGDLSESDDWSEEPKQ"
     gene            complement(5813..6202)
                     /gene="mutT"
                     /locus_tag="OQQ57_001230"
     CDS             complement(5813..6202)
                     /gene="mutT"
                     /locus_tag="OQQ57_001230"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HCS1956061.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLAYEFPDRHITLWFWLVESWEGVPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(6262..8967)
                     /gene="secA"
                     /locus_tag="OQQ57_001231"
     CDS             complement(6262..8967)
                     /gene="secA"
                     /locus_tag="OQQ57_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HCS1956062.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(9029..9541)
                     /gene="secM"
                     /locus_tag="OQQ57_001232"
     CDS             complement(9029..9541)
                     /gene="secM"
                     /locus_tag="OQQ57_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HCS1956063.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNVPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQYAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLT"
     gene            complement(9772..10689)
                     /gene="lpxC"
                     /locus_tag="OQQ57_001233"
     CDS             complement(9772..10689)
                     /gene="lpxC"
                     /locus_tag="OQQ57_001233"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HCS1956064.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFIAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLTFKAPSAVLA"
     gene            complement(10790..11941)
                     /gene="ftsZ"
                     /locus_tag="OQQ57_001234"
     CDS             complement(10790..11941)
                     /gene="ftsZ"
                     /locus_tag="OQQ57_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HCS1956065.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(12002..13264)
                     /gene="ftsA"
                     /locus_tag="OQQ57_001235"
     CDS             complement(12002..13264)
                     /gene="ftsA"
                     /locus_tag="OQQ57_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HCS1956066.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(13261..14091)
                     /gene="ftsQ"
                     /locus_tag="OQQ57_001236"
     CDS             complement(13261..14091)
                     /gene="ftsQ"
                     /locus_tag="OQQ57_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HCS1956067.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKETAMTARRSWQLTLNNDIKLNLGRGDTMK
                     RLARFVELYPVLQQLAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(14093..15013)
                     /gene="ddlB"
                     /locus_tag="OQQ57_001237"
     CDS             complement(14093..15013)
                     /gene="ddlB"
                     /locus_tag="OQQ57_001237"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCS1956068.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
                     DETQYFCPAGLDASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(15006..16481)
                     /gene="murC"
                     /locus_tag="OQQ57_001238"
     CDS             complement(15006..16481)
                     /gene="murC"
                     /locus_tag="OQQ57_001238"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HCS1956069.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFLGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(16535..17602)
                     /gene="murG"
                     /locus_tag="OQQ57_001239"
     CDS             complement(16535..17602)
                     /gene="murG"
                     /locus_tag="OQQ57_001239"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HCS1956070.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(17599..18843)
                     /gene="ftsW"
                     /locus_tag="OQQ57_001240"
     CDS             complement(17599..18843)
                     /gene="ftsW"
                     /locus_tag="OQQ57_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HCS1956071.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVVFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(18843..20159)
                     /gene="murD"
                     /locus_tag="OQQ57_001241"
     CDS             complement(18843..20159)
                     /gene="murD"
                     /locus_tag="OQQ57_001241"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HCS1956072.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     QVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(20162..21244)
                     /gene="mraY"
                     /locus_tag="OQQ57_001242"
     CDS             complement(20162..21244)
                     /gene="mraY"
                     /locus_tag="OQQ57_001242"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HCS1956073.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(21238..22596)
                     /gene="murF"
                     /locus_tag="OQQ57_001243"
     CDS             complement(21238..22596)
                     /gene="murF"
                     /locus_tag="OQQ57_001243"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HCS1956074.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
                     TC"
     gene            complement(22593..24080)
                     /gene="murE"
                     /locus_tag="OQQ57_001244"
     CDS             complement(22593..24080)
                     /gene="murE"
                     /locus_tag="OQQ57_001244"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HCS1956075.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVEQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKV
                     IDVNYHDSGVTIRFSSSWGDGEIESHLIGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTVPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(24067..25833)
                     /gene="ftsI"
                     /locus_tag="OQQ57_001245"
     CDS             complement(24067..25833)
                     /gene="ftsI"
                     /locus_tag="OQQ57_001245"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HCS1956076.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(25849..26214)
                     /gene="ftsL"
                     /locus_tag="OQQ57_001246"
     CDS             complement(25849..26214)
                     /gene="ftsL"
                     /locus_tag="OQQ57_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HCS1956077.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(26211..27152)
                     /gene="rsmH"
                     /locus_tag="OQQ57_001247"
     CDS             complement(26211..27152)
                     /gene="rsmH"
                     /locus_tag="OQQ57_001247"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HCS1956078.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(27154..27612)
                     /gene="mraZ"
                     /locus_tag="OQQ57_001248"
     CDS             complement(27154..27612)
                     /gene="mraZ"
                     /locus_tag="OQQ57_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020325403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HCS1956079.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(28214..29218)
                     /gene="cra"
                     /locus_tag="OQQ57_001249"
     CDS             complement(28214..29218)
                     /gene="cra"
                     /locus_tag="OQQ57_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HCS1956080.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANAPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHLMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(29300..29386)
                     /locus_tag="OQQ57_001250"
     CDS             complement(29300..29386)
                     /locus_tag="OQQ57_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HCS1956081.1"
                     /translation="MCNLQPNMSRWAFFAKSVGTWNKSSCRS"
     gene            complement(29398..29889)
                     /gene="ilvN"
                     /locus_tag="OQQ57_001251"
     CDS             complement(29398..29889)
                     /gene="ilvN"
                     /locus_tag="OQQ57_001251"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HCS1956082.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIREVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(29892..31616)
                     /gene="ilvI"
                     /locus_tag="OQQ57_001252"
     CDS             complement(29892..31616)
                     /gene="ilvI"
                     /locus_tag="OQQ57_001252"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HCS1956083.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
                     LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVVAKKPVVYVGGGAI
                     MAGCHQQLKETVEALNLPVVSSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLEL
                     LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS
                     IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            31735..31779
                     /locus_tag="OQQ57_001253"
     CDS             31735..31779
                     /locus_tag="OQQ57_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956084.1"
                     /translation="MKRNDKILHYEGLN"
     gene            complement(31934..32878)
                     /gene="leuO"
                     /locus_tag="OQQ57_001254"
     CDS             complement(31934..32878)
                     /gene="leuO"
                     /locus_tag="OQQ57_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HCS1956085.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ
                     ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR
                     FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL
                     PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
BASE COUNT         7911 a         9255 c         8018 g         7772 t
ORIGIN      
        1 gattagatac ctgcgacggt ggcagcaatg gcattccctc gcctaccacc acccgctatg
       61 tttcagccat gagtgtggca aaaggcgtgg tgtcgctgac cgggcaagaa agtctcaatg
      121 gactaagcgt cgtcatgacg ccaggttggg ataacgcaaa cggcgtcacc ggctgggcgc
      181 gcaactgcaa tattcaaagt gacagcgcat tgcagcaagc ctgcgaagat gtcttccgct
      241 ttgatgacgc caactaagga gcggcaatga atattccaca gctcaccgcc ctgtgtctgc
      301 gttatcaggg agtcttgctg gatgccagcg aagaggtggt tcatgttgcg gtagtcgatg
      361 caccttcgca tgagttgctg gacgcattgc atttcgctac caccaaacgt attgagatca
      421 cctgctggac gcgccaacaa atggaaggcc acgccagtcg cacacaacag acattgcccg
      481 tagctgttca ggagaagcat cagtcgaaag cagagttgct gactcgaacg ttacaatctg
      541 cgctggaaca acgtgcgtct gatattcata tcgaaccagc ggacaatgcc taccgcatcc
      601 gcttgcgtat cgacggcgta ttgcatcctt taccggatgt ttcaccggat gccggagtcg
      661 cattaaccgc cagattaaaa gtgctgggaa acctggatat tgcggaacat cgcctgccgc
      721 aggacgggca attcactgtc gaactggcag gaaacgccgt ctcatttcgt attgcgacct
      781 taccatgtcg gggtggtgaa aaggtggtat taaggttgtt acagcaggtg aaccaggcac
      841 tggatgttaa cacgctggga atgcagccgt tacaactggc ggactttgct catgccttgc
      901 aacaaccaca gggactggtg ctggtaactg gccctacagg cagcggcaaa acggtcacgc
      961 tttatagtgc cctgcaaaag ctgaataccg ctgacattaa tatttgtagc gtcgaagatc
     1021 cggttgagat ccccatagcc ggactaaacc agacgcaaat ccatccgcgt gccgggctca
     1081 cctttcaggg cgttttgcgt gcgttattgc gccaggatcc tgacgtcatc atgatccgat
     1141 ggcgaaacgg cagaaattgc cattaaagcc gcgcaaaccg gtcacctggt gttgtctacc
     1201 ctacacacta attccacctg cgaaacgctg gtacgtttac agcaaatggg agtcgcccgc
     1261 tggatgctct catcagcgct tacgctggta atagcccagc gtctggtacg taaattttgc
     1321 ccacattgtc gccagcagca aggggagccc atccatattc cagacaatgt atggccgtcg
     1381 ccgctgcccc actggcaggc acccggttgt gtacattgct accacggttt ttatggtcgt
     1441 accgccttgt ttgaagtcct gcccattaca ccagccatac gccagcttat ttccgctaat
     1501 accgacgttg aatcgctgga aacgcacgca cgacaggcgg gtatgcgtac gctttttgaa
     1561 aacggctgcc tagccgtgga gcaaggctta accacctttg aagagttaat ccgcgtactg
     1621 gggatgccgc atggcgagta agcaactctg gcgctggcat ggcataaccg gcgacggcaa
     1681 tgcgcaagat gggatgctat gggcagagag ccgtgctttg ctgctcatgg cactacagca
     1741 acagatggtt accccactta gcctgaagcg aatcgccatc aattctgcgc agtggcgagg
     1801 agataaaagc gcggaagtca ttcatcaact ggcgacgcta ctcaaagccg ggttaacgct
     1861 ttctgaaggg ctggcactgc tggcgggaca gcatcccagt aagcaatggc aagcgttgct
     1921 gcaatcgctg gcgcacgatc tcgaacaggg cattgctttt tccaatgcct tattaccctg
     1981 gtcagaggta tttccgccac tctatcaggc gatgatccgc acgggtgaac tgaccggtaa
     2041 gctggatgaa tgctgctttg aactggcgcg tcagcaaaaa gcccagcgtc agttgaccga
     2101 caaagtgaaa tcagcgttac gttatcccat catcatttta gcgatggcaa tcatggtggt
     2161 tgtggcaatg ctgcattttg ttctgccgga gtttgccgct atctataaga ccttcaacac
     2221 cccactaccg gcactaacgc aggggatcat gacgctggca gactttagtg gcgaatggag
     2281 ctggctgctg gtgttgttcg gctttctgct ggcgatagcc aataagttgc tgatgcgccg
     2341 accgacctgg cttatagtgc ggcagaaatt gctgttacgc atcccgatta tgggttcact
     2401 gatgcgggga caaaaactca cgcagatctt tacgattctg gcgctgacac aaagtgcagg
     2461 cattactttt ttgcagggcg tagagagcgt cagagaaaca atgcgctgcc cgtactgggt
     2521 gcaacttctg acacaaatcc agcacgatat cagtaacggt catcccatct ggctggcgct
     2581 aaaaaatacc ggggagttta gcccgctctg tttgcaatta gtgagaacag gagaggcatc
     2641 cggctcgctg gacctcatgt tagacaacct cgcccatcat catcgggata acacaatggc
     2701 gctggcggat aacctcgcag ccttactgga accggcgttg ctgatcataa cgggaggaat
     2761 tatcggtacg ctggtggtgg cgatgtatct gccaattttc catttaggcg atgcgatgag
     2821 tgggatggga taacgctggc gtgttgctcc acaccagcgt tggaagatta caggttgttg
     2881 aagatgcggt tttcttgttc ctgcacacgg ataaatgtgg tgcgcttggt cagttctttc
     2941 aggcgtgaag ccccaacgta tgtacaagct gaacgcaggc cgcccaaaat atcacgcgcg
     3001 gtattttcaa ccgggcctcg cagcggcagc ttaacggttt taccttctgc tgcgcgatat
     3061 tccgcaacgc cgccaacgtg acgtttcatc gcagactcgg agctcatgcc gtagaacagc
     3121 ataaatttct cgccgttctc ctcaacgatg cgaccgccgc tctcttcgtg gcccgccagc
     3181 atgccgccaa gcatgacgaa atcggcaccg ccgccaaagg cttttgcgac atcgcccggc
     3241 gtggtgcagc caccgtcgct gacgatcatt ccgcccagac cgtgcgccgc atcggcacat
     3301 tcgattaccg cagaaagctg cggataaccg acgcctgttt tgacgcgagt tgtacaaaca
     3361 gaacctgggc caatgccaac tttaacgata tcagcaccgg agaggataag ctcctcacac
     3421 atttcaccag tcactacgtt gccagcacaa atggttttgg tcggccacgc ttcacgcgct
     3481 ttcgcaacga actgcacgaa gtgttcggaa taaccattcg ccacatcaat acaaacaaag
     3541 tttaatgccg ggttcaggtc gagaatctgt ttagtttttt cgaaatccgc atcagacgta
     3601 ccggtagaaa ccatcacatg tttcagcaca tcagcggaag aattgttgat aaacgcttgc
     3661 cactcttcga cagaatagtg tttatgcaca gcagtcaaaa tatcaaaaga agccagcgca
     3721 gaggccatag aaaatgtacc tacggtgtcc atatttgcgg cgataatcgg cacgccggac
     3781 cagctctgat ctgaatgttt gaaggtgaat tgacgttcca gttcaacatc ggaacggctt
     3841 ttaagagtgg agcgtttagg gcggatgaga acgtctttaa aacctaactt cagatcttct
     3901 tcaatacgca tgtgcggatt cctggggtta atggctataa gggtaagagc gcaactccag
     3961 tgacgctatc atacgcacta atcaatgcgg cgcaagactg cgaaattgtc tttttttacg
     4021 ctacaatccc ataaatttac ctggtaaata gtgagcgaac gtttcatcaa tttcgctttc
     4081 gtgcactcat ttttaacgtt ttgataatca tgatgaattc ccgggaatat aaattatgag
     4141 gtatatagtt gccttaacgg gaggcattgg cagtggcaag agtaccgttg ccaatgcgtt
     4201 tgctgatctc ggaattaacg tcattgatgc cgatattatt gcgcgtcagg tggttgaacc
     4261 aggtgcacct gcgctacatg ccattgctga tcactttggc gctaacatga ttgctgctga
     4321 tggaacattg cagcgccggg ccttgcgcga gcggatcttc gccaacccgg aagagaaaaa
     4381 ctggcttaac gccctgctgc atccgctgat tcagcaagag acgcaacacc agatccagca
     4441 agctacttcc ccctatgtac tgtgggttgt gccattgctg gtagaaaact cactgtataa
     4501 aaaagcgaat cgagtgctgg tggtggatgt cagcccagaa acgcaactta agcgcaccat
     4561 gcagcgcgat gatgtaactc gcgagcatgt cgaacaaatc cttgctgctc aggcaacgcg
     4621 cgaagcccgc cttgccgtgg cagatgacgt cattgataat aacggcgcac cggatgctat
     4681 cgcatcggat gttgcccgcc tgcacgcaca ctatttgcag cttgcgtcgc agtttgtctc
     4741 acaggaaaaa ccgtaatgca gacccaggtc ctttttgaac atccactaaa tgaaaaaatg
     4801 cgtacatggc tgcgcattga gtttttgatt cagcaactca ccgttaattt acccatcgtt
     4861 gaccacgctg gcgcgctgca tttcttccgt aatgtcagtg aattactgga tgttttcgag
     4921 cgcggcgaag tccgcactga gctgttgaaa gaacttgacc ggcagcaacg taaactccag
     4981 acctggattg gcgtgcctgg cgtggaccag agccgtattg aagcattaat tcagcagtta
     5041 aaagcggcgg ggagcgtatt aatttccgcg ccgcgtatcg ggcaatttct gcgtgaagat
     5101 cgtttgattg ctctggtgcg tcagcgactg agcatcccag gcggctgttg cagctttgat
     5161 ttacctacat tgcacatttg gctgcatcta ccccaggcgc agcgcgacag ccaggtagaa
     5221 acctggattg ccagcctgaa cccgctcacc caggcactta ccatggtgct ggatttaatt
     5281 cgccagtcgg cccccttccg taaacaaacc agcctgaatg gtttttatca ggataacggt
     5341 ggcgatgccg acttgctgcg cctgaatctg tcgctcgatt cacagcttta tccgcaaatt
     5401 tccggacata agagccgttt tgccattcgt tttatgccgc tggacagtga aaacggacag
     5461 gtaccggaac gtctagattt cgaactggcc tgttgctaag gagtgaaaat gtcagaaact
     5521 attacggtga attgcccaac ctgcgggaaa acggtggtat ggggtgaaat cagcccgttt
     5581 cggccatttt gctccaaacg ttgtcagctg atcgacctcg gagaatgggc tgctgaagaa
     5641 aaacgaatcc ccagcagtgg cgatctttcc gaaagcgatg actggagcga agagccaaag
     5701 cagtgacatt ggtctgatgc cgcacatagg cctgataaga cgcggacagc gtcgcatcag
     5761 gcatcttgtg caaatgtcgg atgcggcgtg aacgccttat ccgacctaca gactacagac
     5821 gcttaagctt cgcaattacc ggttcattgg ctggcggaaa atcatcggca ttaagaccga
     5881 ccagcgacat ccactcaccg ggttgccctt ctttacccca cggcacccct tcccaacttt
     5941 cgaccagcca gaaccacaga gttatatgcc tgtccgggaa ttcatatgcc agtttttcaa
     6001 atagcgaaaa atgttgtggg gtaatcccga cctcttcctg aagttcacgc accaccgcct
     6061 gttccggcgt ttcgcccatt tcaattttac cgccgggaaa ctccagttta ttcgccatgt
     6121 gcgcatctgc tgcgcgacgc gttataaaga tttcattgtt ctcgttgcga ataataccta
     6181 ccgcaatttg cagctttttc attgttttaa acctataaaa aaggcgcaga atcctgcgcc
     6241 ttttgcttca acagttagct tttattgcag gcggccatga cactgcttgt attttttacc
     6301 agaaccgcac gggcaaggat cgttacgtcc tactttgcgc tcaccggttt gcgccgccag
     6361 tgcagctgcg gctgcagagt cgtcatcctg atggctaagc tgctgcattt gcgctaaacg
     6421 ctcggcttcc atacgacgct gttgttccag ctcctcaacc tcttcaggca tacgtacctg
     6481 aactttgctc agcgtactga taacttcata tttcaacgac tccagcatcg ctgcaaacat
     6541 ggagaacgat tcacgtttgt attcctgctt cggatctttc tgtgcatagc cacgcaggtg
     6601 gataccctga cgcagatagt ccatcgctgc caggtgctct ttccacaggg agtcaagcgt
     6661 ttgcagcatg acgcctttct cgaagtgacg catcatctca gcaccaacca cttcttcttt
     6721 acgctgatac acttcgatgg actgcgccag aatgcgctca cgcagcgtct cttcatgcag
     6781 ttctggttct ttatccagcc actcggcaat tggtaaatcg aggtcgaaat cgttcttcag
     6841 acgttcctgc agccccggaa tatcccacat ttcttccagc gactgtggcg gaatgtaggc
     6901 atcaatggtg gctttgaaca catcttcacg aatgctgttg atggtttcgc tcacatcgct
     6961 gacatccagc agttcgttac gctgggagta aatggcgcga cgctgatcgt tagccacgtc
     7021 atcatattcc agcagttgct tacgaatgtc gaagttacga ctttcaactt tacgctgggc
     7081 gttggcaatc gctttagtca cccacgggtg ttcaatggct tcgcctggct tcatacccag
     7141 tttacgcatc atgccggata ctcggtcgga agcaaaaata cgcatcagcg catcttccat
     7201 cgacaggtag aaacgggaag aaccagcatc cccctgacga ccagaacgac cgcgcaactg
     7261 gttatcgata cgacgggatt cgtgacgctc ggtaccgatg atatgcaggc cacctgcttc
     7321 cagtaccgca tcgtgacgta cctgccagtc ggctttaatt ttttcaattt gctctgcggt
     7381 cggattttcc agcgcggcaa cttctgcctg ccagctacca ccgagcacaa tatctgtacc
     7441 acgacccgcc atattggtcg cgatagtcac cgcagccgga taacctgcct gagcaacaat
     7501 cgccgcttcg ttggcgtgga atttggcgtt caggacgttg tgcttaatac cggctttggt
     7561 cagttcgttt gacaccagct ccgatttttc gatggagata gtacccacca gcaccggctg
     7621 gcctttcgca gtacgttctt tgatatcttc aatgatcgcc tgaatttttt ccgcttcagt
     7681 catgtagacc aggtccggca gatctttacg aatcattgga cggttggtcg gaacaacgac
     7741 ggtatccagc ttgtagatgg agctaaattc gaaagcttcg gtatcagcag taccggtcat
     7801 ccccgccagt ttttcataca gacggaagta gttctggaag gtgatcgaag ccagcgtttg
     7861 gttttcgttc tggatctgca caccttcttt cgcttccaca gcctggtgca gaccatcgga
     7921 ccagcgacgg ccctgcatgg tacgaccggt gtgttcgtca acgatgataa cttcaccatc
     7981 tttaacgatg tagtcgacgt cgcgggtaaa cagcgcatga gcgcgcagcg ccgccgttac
     8041 gtggtgcatc agcatgatgt tggccggaga gtacagagac tccccttcat ccatgatgcc
     8101 ctctttcacc agcagttctt caatcagcac cagaccacgt tcggtcaggt tcacctggcg
     8161 agatttttcg tccaccgaga agtggccttc gccctggaag gtttcggagt cttctttttc
     8221 ctgacggatc aggtgcggaa taattttatt cacgcgttta tacatttccg agctgtcttc
     8281 tgccgggccg gaaatgatca gcggtgtacg cgcttcatcg atcaggatgg agtccacttc
     8341 gtccaccagc gcatagtgca gtttacgctg tacacgttct tcagggctga acgccatatt
     8401 gtcgcgcagg tagtcaaagc cgtattcgtt gttcgtaccg taagtgatgt cagctgcgta
     8461 agcttcgcgc tttgccggtg ctggcatgcc cggcaggttg ataccgacag tcaggccaag
     8521 gaattcaaac agcggacggt tgttttcggc gtcacgttgc gccaggtagt cgttgacggt
     8581 aactacgtgc acgcctttac cggttagtgc gttcaggtaa gcaggcagcg ttgcggtcag
     8641 ggttttacct tcaccggtac gcatttcggc gatgcagcgt tcgttaagaa ccataccgcc
     8701 gagtaactga acgtcgaagt gacgcatacc aaagacgcgc ttacttgcct cacgtaccac
     8761 ggcgaaagct tccgggatca gattttccag cacttcgcct ttttccagac gtgcacgaaa
     8821 ctctgcggtt ttccctttca gttcttcgtc ggagagtttt tccatctccg gttccatggc
     8881 attgatgatg ttgaccactt tgcgcatccg gcgcagggtg cgatcgttac gactaccgaa
     8941 aactttagtt aacaatttga ttagcataat aaaatctcaa acgccccgcg ttgcggagtt
     9001 aataaaatga agtaaaggtt tattgttgtt aggtgaggcg ttgagggcca gcacggatgc
     9061 cttgcgcctg gcttatccag acgggcgtgc tgaattttgc ttgtggggta aaatgcgcat
     9121 aatcaatgcg ataacccttt tcagacggcg tgccttcctg ggtcagcagc gcgctgagcg
     9181 tatccagtaa tgcaagatgt tgcgcctgaa gaggcaaaga ttcttcagca acgggcagtg
     9241 tttgcggtgc cattgcgaaa gaaagatgac ggattaccgt gcgaatggca tattgatgcc
     9301 agtaatcaac ggaatagttc gaattcgggc ggcgtgtgtt cgcttccagc aaggccaatt
     9361 gaccaaagtt aactttggct gaaggctcgt ggttgcgggt tgtcgctttt gcgggcacgt
     9421 ttggttcggc ggcgttgctg agcgcaggca aacctaaact cgccgcgacc atccctaata
     9481 agagatgcgg ccagaagtag cgtttaccaa actgtcgcca gcgcgtcagt attccactca
     9541 cgttattgcc atcccgatcg aattcaaacg tatttagcgc acaaatctta tcattaaagc
     9601 ctgaagtcca cagcatgaat gaagataagt tgtgcgtaaa agtgcttaag aaaacagcgt
     9661 tcgcaccgtt ttttatagct cttataaaat tcaaaaaaaa acgactggtt cacctggccg
     9721 gagagagtgc cagatttgcc agtcgaattt tatacgacag tataaatgtc gttatgccag
     9781 tacagctgaa ggcgctttga aggtcaacgg cagttctgcg tcgtcctgga aggtcacata
     9841 ttcccaagct tcctgtttcg ccaggacagc ctgcagcagt ttgttattca gtgcatgacc
     9901 ggatttataa gcgataaatg caccaataat attgtgacca cacatgaaca agtcaccgat
     9961 cgcatcgagc attttgtgac gcacaaattc gtcttcaaaa cgcaggccgt cttcgttcag
    10021 tacgcgataa tcgtcaacaa cgatggcaca atcgaagctg ccgcccaggc acaaaccacg
    10081 ggactgcaga tattcgatat cacgcatgaa accgaacgta cgcgcacggc tgatctggcg
    10141 cataaacgca tcagcggaga agttcatcgc atagcgctgg ttgctggaat caatagccgg
    10201 atggttaaaa tcgatggtga aatccagcga aaaaccattg tacggcttaa attcagccca
    10261 cttatcgcca tcttcgacac gaacagtctc tttgatgcga acaaattttt tggcgcagtt
    10321 caactcgtcg ataccggcgt caagcagcag gtatacaaac ggagcggcgc tgccgtccat
    10381 gatcgggatt tccggcgcgt taacttcgat aacaatgtta tcgatgccca ggcccgcgag
    10441 agcagcattg aggtgctcta cggttgaaat ccgtacatca tgctcgttga ccagacacgt
    10501 acagagcatg gtatcacgca cagatttggc atcggccggg aaatctaccg gtggattcaa
    10561 gtcggtgcga cgatagatga ccccggtgtt ggccggcgca gggcgtaacg tcagagtgac
    10621 tttcttgccg gtatgtaaac cgacacccgt cgcctgaacg atacgtttaa gtgtcctttg
    10681 tttgatcatc gtattatctc gccaaattac ctatccaacc gaagtgtact atacattcgg
    10741 cgggccagtt tagcacaaag agcctcgaaa ccaaaattcc agtcaattct taatcagctt
    10801 gcttacgcag gaatgctggg atatccagat aatccggctc tttcgcagtt tgcggcgcat
    10861 tgtcattcac gactttagca accggcttct gctcctgggt cagcggagcc atcccatgct
    10921 gctggtagcg atccatcact ggctgctgaa cctgcttatt ggtcaccaga gtgatttcag
    10981 gacgtttgtc catgccgata cctgtcgcaa caacggttac gcgcagctcg tcattcatat
    11041 ccgggtcaag agaagtaccg ataaccacag tcgcgttgtc ggaagcaaat gcacggatgg
    11101 tgttacctac cgtttcgaac tcatccagac gcaggtcgaa gcccgccgtg atgttaacca
    11161 gcacgccgcg cgcgccagac aggtcgatat cttccagcag cggagaagag atagccattt
    11221 cagcagcttc ttccgcacgg tcttcaccgc tcgccacgcc agaacccatc attgcgtagc
    11281 ccatctcaga cattacggtg cgtacgtctg caaagtccac gttcatcaaa cccggacgag
    11341 taatcagttc agcgatacct tgcacagcgc ctttcagtac atcgttcgct gcgccaaacg
    11401 catccagcag ggagataccg cggcccagaa ctttcagcag tttgtcgttc gggatagtga
    11461 tcagagagtc cacatgcttg gacagttcag tgatcccctg ctccgcgaat gccatacgct
    11521 tcttgccttc aaagttgaaa ggcttagtga cgacagcaac ggtcaggata cccaaatctt
    11581 ttgccacttc agcgacgact ggtgctgcac ctgtaccggt accaccaccc atacccgcag
    11641 caataaagac catgtctgca ccttccagcg ccgcacgcaa tgcatcgcga tcctcatcag
    11701 ccgcattgcg gccaacttct ggattagcgc cagcgcccag tcctttggtg ataccgctac
    11761 cgatttgaat cgtctgtcca accgctgttt tacgcagcgc ttgtgcatcg gtatttaccg
    11821 cgaagaattc aacaccttca atgcgctcgc gcaccatgtg ttcaacagca ttaccgccgc
    11881 cgccgccgac gccgatgact ttaatcaccg cgtcattggt aagttccatt ggttcaaaca
    11941 tagtttctct ccgatttgtg cctgtcgcct gaggccgtaa tcatcgtcgg cctcataaaa
    12001 attaaaactc ttttcgcagc caactattga gtcgcttgat ccacgagcca actgatgctg
    12061 taacacgttt ttctacttca gcttcaccgt taagatgtga ctctttccca tagtgaagca
    12121 atcccaccgc cgtcgaataa tacggctcct gagcataatc cgttaaaccg gtaatgttca
    12181 gcggcgcgcc gatacgcact tgcgtatgaa acacgcgctg agcacaggct gcaagacctt
    12241 cgatctgcgc tgcgccaccg gttaatacaa tgcctgccgc caggtgatgt ttaacccctt
    12301 gttggcgaag cttttcctgc aactgcaata tctcttcgtt gaccaggttg agcagctcgg
    12361 tatagcgcgg ctcgatcacc tctgccaggg tctgacgttg cagactccgt ggcggacgac
    12421 cgcctacgct cggcacttcc acgctctcat cttttccaac gatggaaccc agcgcacaac
    12481 cgtggcgaac tttaatcgct tcggcgtcgc ttggcggcgt gccaaaggcg taagcgatat
    12541 cactggtcac gacattgcca gcataaggaa ttaccttagt gtggcgcaat gccccaccgg
    12601 tataaacggc gatatccatt gtaccacctc cgatatcgac gacgcagaca cccagttcac
    12661 gttcatcttc cgtcaatacc gaataacttg atgccagtcc ggcaaatatc agttggtcaa
    12721 ctttcagccc acaacgttca accgctttga cgatgttttt cgccatatcg ttgtgacatg
    12781 tgatcaggtg cacttttgcc tgcatccgca cgcccgaaag tcctaccgga ttcttgatcc
    12841 cttcctgata gtcaatcgca tactcttgcg ggatcacatg cagcacacga tgttcatcgc
    12901 gcacacgcac cgatttcgcg gtatggacga cgttttccac atcttcttgc gtcacttctt
    12961 cttcagaaat aggcaccata ccaatttcat tctggcagct gatgtgctta ccagaaagcg
    13021 ccagatatac cgaagagatc tgacaatctg ccatcaattc tgcctggtca atggcgcgtt
    13081 gtacgcactt gaccacggat tcgaggtcgt tcaccccgcc tttatccata ccacgtgacg
    13141 ggcagctgcc cacgccaatg atattgacca taccgtcggg cagaacttcc cctactaaag
    13201 cggcaacctt cgcggtacca atctccagtc ctactaccag ttttctgtcc gtcgccttga
    13261 tcattgttgt tctgcctgtg cctgattttg ttgctgagta gattcctctg gcggcaaggg
    13321 cgcccagcct actgccgctc cagagtcata acgcaaatca acgtagctaa tccgtttgcc
    13381 atcggtttgc gccagctgct gtaaaaccgg ataaagttct acaaagcgag ccaaacgttt
    13441 catcgtatcg ccccggccaa gattgagctt aatatcgtta ttcagcgtca actgccagga
    13501 acgccgcgcg gtcatcgccg tttccttcag agtaaatctg tcctttgcca gcatctgccc
    13561 catttcgcga tagccctgca acacttcatt ggcgctgcct tccgggccat acagcattgg
    13621 aagcacctgc ttgctggtgc gatctggcgg cacgctgaag gtgtttcctt ccgcgtctac
    13681 catatgttga tcattccacc gcgcaatcgg cacatattca accagatgaa tcttcaattc
    13741 atcaggccac tgctttctga cgctcacctg cttaatccac ggcaggcgtt gttctatttg
    13801 cgtctggatg atgttgacat cctgggtcat aaaggtaccc ggctcaccca atgccaggat
    13861 cgactgccgg atatcgtcat tacgcgtgta atggcgttca ccggtcaaca ccagctttga
    13921 gagcggcagg cgttgcgcat cttccatcca gcccaacacg acccagccgc tcaccaacac
    13981 tgtcgttaaa acggtcagca ggaaaaggat ccccgccaga cgcgttccat tattgcggcg
    14041 agaagaaacc tcttcttcgc tgtttcgcgt gttcagagca gcctgcgaca tattagtccg
    14101 ccagttccag aattcgtact accaactgcg agaagctcat acctgcctga cgtgccgcca
    14161 tcggcaccag gctgtggctg gtcatacccg gtgaggtatt ggcttccagc agataaaact
    14221 gtccatcgct gtccagcata acgtcaatac gtccccatcc tttgcaacct aacgtcgtcc
    14281 atgctttcag cactaatgcc tgcaaattgg cctcttgtga cgcatccaga cctgcggggc
    14341 agaaatactg tgtctcatca gagagatact tcgcctcata atcatagaag gttccggacg
    14401 gttgaatacg tattgacggt aaaatttctt caccgagtat cgcaaccgtg aactccggcc
    14461 cacttagcca tttttcaatc aatacttctt catcgtgctg aaatgccaat cttaatgcat
    14521 cttgtagagc attttctgct actacttttg acattcccac actggaacct tcgcggctcg
    14581 gcttaacgat aaccggcaaa cccagagcag aaatttctgc taactgctta tcgctcaggc
    14641 ctttttcaaa ctctgcgcgg gttaacgcta cccacggcgc gaccggtaaa ccggcacctt
    14701 gccacagcag tttgctgcgt agtttatcca ttgaaagcgc agatgccatc actccgctgc
    14761 cggtataagg caagcccatc agctcgagca tgccctgcag cgtaccatct tcaccgccgc
    14821 gaccgtgtag cgcgataaac actttctgaa aacccatcga cttcagttgc gtcacgtcga
    14881 cttctttcgg gtcgacagga tacgcatcaa taccaccttc acgcagcccg gctaacaccg
    14941 ctgcgccaga attcagagaa acttcccgct cagcggaagt cccgcccaac aggaccgcga
    15001 ttttatcagt catgttgttc ttcctccgga gtttgcggct tcagtttgat ttcagctaaa
    15061 gaacgggcaa tttttccgat attaccagcc ccctgaacga gaatcaggtc gttaccggtt
    15121 aataccggtg ccagcatctc ggctacctgc gcagggtccg gcaccagaat gggatcaatt
    15181 ttcccacgtc cacgaattgt gcgacacagc gaacggctgt ccgctcccgg aattggcgct
    15241 tcgccagccg gatacacttc cagcatcaac agggtatcaa cctgcgtcag cacattggcg
    15301 aaatcatcat acaagtcgcg cgtacgggta aaacggtgcg gctgaaacag cattaccagg
    15361 tttttatccg gccagcctgc gcgcgccgct ttaatggtgg cgtcaacttc cgtcgggtgg
    15421 tggccgtagt catcgaccag cattgccgta ccgcttttac cattcactgg ctccagcggg
    15481 aattcaccga ggaaatcaaa acggcgacca gtccccagga agctctccag cgcacgcaaa
    15541 atagcctcgt cgtcaattcc ctcttccgta gcaaccgcaa ccgcagctgc ggcgttcagc
    15601 gcgttatgac ggcctggcgc attcagggtg acgcgcatcg gctctttgtc ctggcgcagc
    15661 agcgtaaagt gcccctgcgg gccaatctgc tgataatctt ctacacgcac gtcggcatct
    15721 tcgctgaagc cgtaagtcgt ggtctgacgt cccacacgcg gtaacaattc gcggatcacc
    15781 ggatcatcaa cacacatcac cgcacgaccg taaaacggca ggttgtgcag aaaattaata
    15841 aaagtctgtt ttaaattctc aaagtcgccc tggtaggtat ccatgtggtc ggcttcgata
    15901 ttggtgacaa tcgccaccat cggttgcaga tgcaggaacg atgcatcact ctcatctgct
    15961 tcggcaatca ggtaccgacc atgccccaaa cgcgcatgaa cccccgccgc ttttaccagc
    16021 ccgccgttaa cgaaggttgg gtcgagcccc gcttctgcgt agatgctgga aaccatcgcg
    16081 gtggttgtcg ttttgccgtg cgttcctgca atggcgatgc catgacgaaa acgcattaac
    16141 tcagccagca tttcggcacg acggatcacc ggaatacgcg cttcatgagc tgcgacaatt
    16201 tccgggttat cggcagaaat ggcgctggaa acaacgacca cgctggcatc acgtacgttt
    16261 tccgggcgat ggttgaaata aatcgtcgct cccagattca ttaactgctg cgtgaccgga
    16321 tttggcgcta aatcggaacc actgatctga taaccttcat tggccagaac ttcggcaata
    16381 ccgcccatac cggcaccacc gatgccgaca aaatgtatgt gccgaacgcg acgcatttcg
    16441 ggcacgatgg aacgcagttt tgccaattgt tgtgtattca ttctttacgc cattaacttc
    16501 ttaaattcat acgatgcaaa aggcatcgct acaattacgc ccgggcagcc cggctcactt
    16561 catttgccac tcgctcggtg gcatccggaa tggatgcagc gcgggcgcgt tctgccatgg
    16621 ttaataaggt ttctcgcgac cacccggcca gggtgttggc gacagcatcc acgctaagct
    16681 gtggctgctc gataattttg gctgcgcccg ctttttccag cggtagcgca ttccagtatt
    16741 gctggcggtc tttatgttga aacggcacaa acaacgccgg tagtcctgcc gcggcgattt
    16801 cactcaccgt taaagcaccg gagcggcaaa cgacgacatc cgcccacgca tacgccgccg
    16861 ccatatcatc aataaattcc gtcactttat gctgcggttg ccccgcttcg gcatacgcct
    16921 gttcaacgga ttgttgcgaa cctttaccgc tctgatgcca gatagtgact gaatcaccca
    16981 gtttcgcagc aacctgcggc attgtctggt taagaatgcg tgcgccctgg gaaccaccca
    17041 ctaccagcac acgaaccgga ccttcacgtc cagccaaacg ttgctgcggc aacggcagcg
    17101 ccagcacatc ggtacgcacc gggttaccca ccacttccgc attagggaaa gcgcctggaa
    17161 acgcctgcat cactttggtg gcaatcttcg ccagccattt attggttaag cccgcaatac
    17221 cgttttgttc atgaagtaca accggaatgc ctaacgacca cgcggccaga ccacctggac
    17281 ctgatacata gccgcccata ccgagtacca cgtcaggttt gtacgctttc ataatcgccc
    17341 gcgcctgacg ccaggcgttg aagatacgca gcggcgcagc tatcagtgct tttatacctt
    17401 ttccacgcag accagagata cgaatgaaat caatttcgat gccatgtttt ggcactaagt
    17461 ccgcttccat acggtcggca gtccccagcc agcgaacttg ccaaccctga gccattagat
    17521 ggtgcgcaac cgccagtccc gggaatacat gtccaccggt tccgcctgcc atcaccatta
    17581 atcgctttcc ttgaccactc atcgtgaacc tcgtacaaac gcctgcgctt tctccagacg
    17641 cgtttcataa tcaatacgca acagcatcat gatggctgtc gacataatca gtaagctcga
    17701 accaccgtaa ctgatcagcg gcaatgtcag acctttggtc ggtaacatcc ccgccgccgc
    17761 gcctacgtta accagcgcct ggaagctaaa ccagatgcca atagaacagg cgagaaaacc
    17821 ggaaaaacgg tggtcaattt ctaacgcttt gcggccaatc gacatcgcgc gaaaagcgac
    17881 gaagaatacc attaaaagtg ccagcaccac accgacatac cccagttctt cgccgataat
    17941 ggcgaaaata aagtcagtgt gcgcttccgg cagatactcc agtttttgta ccgagttacc
    18001 taaaccttgt ccccaaagtt cgccgcgacc aaacgccatc agcgattgcg ttaactgata
    18061 gccgctgcca aagggatctt cccacgggtt ccagaatgcg gtaacacggc ggatacggta
    18121 cggttcggcg agtatcagca acacaaccgc tgaaatgccc ataccgataa tggcaatgaa
    18181 ctgccacaat ttcgctcccg ccaggaacaa catcgccagc gtagtcacaa acaccaccac
    18241 caccgtacca aggtctggct gtgccagcag taacactgcc aacaccagaa tcacgcccat
    18301 cggtttcagg aagccgcgca ggttattacg tacttcgtcg cctttacgca ccagatagtt
    18361 ggcgatataa caaaacagcg acagttttgt cagctccgca ggctggatac gcagcaaacc
    18421 gagatcgatc caacgcgatg cccctttaac cgagctcccc actaccagca cgatcatcag
    18481 caggatgata gatccgagca gcatcgtggc actgtagcgt tgccagaact ccatcggcag
    18541 acgcagcgta atgatcgcca gaatgaatgc caggatcaga tagacgccat cacgcttcgc
    18601 gaagaagaac ggatcgttgg ttaagcgttg ccctatgggc attgacgccg aggtcaccat
    18661 gataaagcca atcgccgcaa ggccgaaggt cagccacagt aaggtgcgat cgtacatgat
    18721 caggctgtcg gtatcttttt cccgcgagcc catcacccag ccttttagcg ccgtggagat
    18781 ccagaccagg atactgaatc ctggcaggcg cggcattttc aggcgaggga gagataaacg
    18841 catcaaccta actccttcgc cagacgggca aactcattgc ctcgttgttc aaagttcttg
    18901 aactgatcaa ggctggcaca ggccggggag agcagaacca tatcgcccgg ctgaacacgc
    18961 ggagccagca agcgcatcgc ctgttccata gtttcggttt gttctgccac ttccgggcgt
    19021 agcgccgcca gctgcgcacc gtcacgacca aaacagtaca aacgcacgtt gtcgccattc
    19081 agatagcgcg ccagtggact gaagtccgcc gatttaccat cgccgcccag caacaaatgc
    19141 agcgtgccgt ctacctgcaa gccattcaac gccgcttccg tactgccgac gttagtggct
    19201 ttcgaatcgt taatccagcg tacgccattg tgctccagca ccacttcaaa gcgatgcggc
    19261 agaccggtga aggtggttaa cgctttcagg ctgctggcgc gcggcaaacc agctgcgtct
    19321 gccagtgcca gtgctgccag cgcattggtg tagttatgct gcccggaaag tttcatctct
    19381 ttcacgttca gcactttctc gcctttcact cgcagccagg tttctccctg ctgatgattc
    19441 aggtgatagt cacccatgtt gacgccaaag ctgacgcagc gttcatcagc accgcgaatc
    19501 ggcattgtta aggcatcatc agcattgacg acacaaactt tcgcattttc gtaaatacgc
    19561 aattttgccg cacggtattg ctgcaaacca aacggatagc ggtccatatg atcttcagtc
    19621 acgttcagaa tggtcgccgc caccgcctgt aagctggaag tggtttccag ctggaagctc
    19681 gacagttcca gcacgtacag ttcgcactca gcatcaagca gcatcaacgc tggcaggcca
    19741 atattgccac ccacaccaac gttaaccccc gccgctttcg ccatttcacc cactagcgtg
    19801 gtgaccgtgc ttttgccgtt agaaccggta atcgccacaa tcggtgcttg tgcttcgcgg
    19861 cagaatagct cgatatcgcc aacgatttcg attccggcat cagcggcagc gcttaaggat
    19921 ggatgcgcca gtgcaatacc gggactggcg acaatcagat ctgccgccat cagccattca
    19981 tcattcagac tgcccgtgtg gcgttctacg gcttcgggta atttatccag gccaggcggt
    20041 gtcatacgcg tatccataac gcgcggcgtc acaccgcgag cgaggaaaaa gtccacgcag
    20101 gaaagcccgg tgaggcccag gccgataatg acgacatttt taccctgata atcagccatg
    20161 attaacgtac cttcagcgtt gccagaccaa tcagaaccag catcagcgaa ataatccaga
    20221 aacgcacaat gacgcgcggt tccggccagc ctttcagttc atagtggtga tgaatcggtg
    20281 ccatgcggaa aatacgttgt ccgcgcagtt taaaggagcc gacctgcagg atgacagaaa
    20341 gcgtttctac cacgaacacg ccccccataa tcaccagcag gaattcctga cgtagcagta
    20401 cggcgataat gcctaacgca ccacctaacg ccagcgaacc tacatcgccc ataaagacct
    20461 gcgccggata ggtgttaaac cacaggaagc ccagtcctgc cccgactatc gcggtacaga
    20521 caataaccag ttccccggcg tgtcgcagat acggtatgtg taaatagctg gcaaagttca
    20581 tgttgccggt cgcccacgcc accagcgcaa aaccaccggc gacaaatacg gtcggcataa
    20641 ttgccaggcc gtcgagacca tcggtcaggt ttaccgcgtt gccagtaccc acaatgacga
    20701 agtaagccag cagaatgtag aacagcccca actgcggcat cacatcttta aagaatggga
    20761 ccaccagctg cgttgcgggc gtgtctttgc cggcaaggta cagggcgaag gcgacaccca
    20821 gcgcaatgac cgacatccag aaatacttcc aacgagcgat caaccctttg gtgtctttac
    20881 gcaccacttt gcgataatca tcaacaaagc caataacacc gtaacctacc agcaccacca
    20941 acacgcacca gacgtacgga ttggacgggt aagcccacag cagtacggag atcacaatcg
    21001 ccgtcaggat cataatcccg cccatggtcg gcgtaccgcg cttgctgaag tgtgattcag
    21061 gaccgtcgtt acgcaccacc tgaccaaagg aaagtttttg caaatgagca atcatacgcg
    21121 ggcccatcca caatgagatg aacagcgcgg tcagcaggct gacgatggcg cgaaacgtca
    21181 gataggaaaa gacgttaaag ccggaataat atttgaccaa atgttcggcc agccaaacta
    21241 acatgtccca ttctcctgta aagcgcgtac tacctcttcc atggcggcac tacgtgaacc
    21301 cttaactaaa atcgtaatta cctgttgctc agcaatcagt gatttaagac gcgtaattaa
    21361 cgcagtttta tcagcaaaat gttcgccaac gccgctggcg gtgctgatag catggctttg
    21421 tttacccacg cttaacacgc ggtcaatacc agcagctttt gccgcctcgc ccacctgtac
    21481 atggcaggct tcgctttcag cgcccagttc cgccatatcg cccaccacca gcacgcggta
    21541 gcccggcatt tcagccagta cctgaacagc ggcggtcatt gaaccgacat tggcgttgta
    21601 ggagtcgtcg agcagcaact ggttttctgc cagttggatg gggaacagac ggcctggaac
    21661 agctttcaga tttgccagcc ccgctttgat agcatcaagc gttgcgccca cggacatgga
    21721 gagcgcagcg gctgccagcg cattcgcaat attgtgacgc cccggcaacg gcagcagaac
    21781 atcgacgcta ccggttgggg tttgtagggt aaattccgta ccgtgcgagg tcacatggat
    21841 attggtggcg gtgaaatcgc tgttggcggc attgggtgag aaacgccaca ctttgcgtga
    21901 gccaattacg ctctgccagt tcagccagtc gttgttgtcg gcgttcataa tggcgatacc
    21961 gttttccggc aggccgctaa agatttcacc tttcgctttc gcgacacccg caagcgagcc
    22021 aaaaccttcc agatgcgccg ctgccaggtt gttgaccagc gcagcttccg ggcgagtcag
    22081 actcacagtc caggctattt cgccctgatg gttcgcgcca agttcaataa ctgcgtaatc
    22141 gtattccggc gttaagcgca acaacgtcat cggtacaccg atgtcgttgt tgagattgcc
    22201 tgccgtataa agcgtgttgc cgcactggct taaaatcgcc gccgtcatct ctttaacgga
    22261 ggttttgccg gaggaacctg tcagagcaac cacgcgcgcc ggaacttgct ggcgaaccca
    22321 tgcagccagt tcaccaaacg ccagacgcgt atccttgacg attaactgcg gcaggtcgat
    22381 atccagcgga cggctgacca gtagtgcgcc cgcgccgcca gctttcgcct ggtcggcaaa
    22441 atcgtgggca tcaaaacgtt cgcctttcag ggcaacaaac aggcagcccg gcgtcagttt
    22501 tcgggtatca gtggttacag catcaagggt gatatctgca ccttgcagtt caccattgag
    22561 aatgtcggta agttggctaa gggttacgct aatcatgcaa tcacccccag cagacgcgcc
    22621 accgtgacgc gatcggagta gtccagacgc tgattgccaa caatctggta atcttcatgg
    22681 cctttgcccg cgaccagcac cacatcgttc tctttagcct gcataacggc gcaagtcacc
    22741 gcttcagcac ggccttccat cactttggca tgtccggcat ctaacattcc cgccagaata
    22801 tcgttgatga tggcacgcgg ttcttcggta cgcgggttat cgtccgtcac caccgccacg
    22861 tcagcaaact cttcggcaat tgcgcccatc agtggacgct tacctttatc gcgatcgcca
    22921 ccacagccaa agacacacca cagcttgccc gcacagtgca gacgcgccgc ctgtaaggct
    22981 ttttccagtg catccggcgt atgcgcgtaa tccaccacca ccgtcggttt gcctggcaca
    23041 gtgaacactt ccatacgtcc gcaaaccggt tgcagacgcg cggcggtttt caacagatca
    23101 gccaatggat agccgagtgc caacagtgtc gccagcgcga gcagcaggtt gctgacgtta
    23161 aaagcgccta tcagatggct ttcaatttcg ccatcgcccc aacttgagct aaagcgaatc
    23221 gtcacaccgc tgtcgtgata gttcacgtcg atcactttta accagcgtcc gtgacagttc
    23281 ggattaatat gatcttccat tgataccgca accgcgtccg gcagctttgc cagccaacgg
    23341 cggcccactt catcgtcggc gttaataatc gcctgaccgc aatgatgttc agaataaagc
    23401 agccatttcg cagcttcgta gtgttccata tcaccatgat aatcaaggtg atcgcggctt
    23461 aagttggtaa agaccgacgc cgcaaatttc aatgccgcca cacggtgctg taccagcccg
    23521 tgggaggaaa cttccattgc gcaaaacgtc gcgccctgct ccaccagccc cgccagctca
    23581 tgctgaacat cgactgccga accggtggta ttttctgtcg ggatcacttt ccccagcaga
    23641 ccgttaccaa cggtgcccat taccgcgctg gtttcgccaa gcagttggct ccactgcgcc
    23701 agcagctggg tagtcgtggt tttgccgttg gtgcccgtta cgcctacgag acgtaaattg
    23761 tcagagggtt catggtaaaa gcggcccgcc agtgcagata aacgctcgtt gagctggctg
    23821 agatagatga ccggtacgcc gtgcatttca cggatttcac cgtcggtcgc ctcatctttc
    23881 gcctctgcaa taatggcagc cacaccttgc gctatcgcct gcgggatata tcgacgcccg
    23941 tccgcctgat gacctactac agctacaaag agatcgcccg ccgcagccac acggctgtcg
    24001 agtgtcatct ctcgcagtgc tcgcgaaggt gcgtctggca cccacggagc aagaaggtcg
    24061 cgcaaattac gatctgccac ctgtcccctc gccttgatta atcacaaatt catttttatc
    24121 gcccgttgtc agcgcatccg gctcgatgtt catggtacgc aatacgccgc ccatgatggc
    24181 accaaagacc ggcgcggaaa cggcgccgcc gtagtattta cccgcctgcg gatcgttgat
    24241 aacaacaacc agcgcgaagc gcggctgact cgcaggcgca acgcctgcgg tataagcaat
    24301 atatttattg atgtagcgac cgtccggccc gacctttttc gcggtaccgg ttttaatggc
    24361 gatacgatag cctttaatcg ccgccttcac gccgccgccg cccggtagcg ccacgctttc
    24421 catcatatgc accacggtgc ggacaatgga ttccgggaag acacgttcac cgggaaccgg
    24481 ggggtcaact ttggtaatcg acagtgggcg ataaatgccg tagctgccga tagttgcgta
    24541 gactcgcgct aactgtaacg gtgttaccat tagcccgtag ccgaaagaga aggtggccct
    24601 ctctatgtca gaccaccgtt gtttttgagg atataagcca ctgcgttctc cgaccaaccc
    24661 caaattggtc gcttttccca gtccaaaacg tgagtaagta tctactaacg ctgaggacgg
    24721 catcgctaac gccagcttgg aaacaccgac gttactcgac ttctgtaata ccccggtcag
    24781 ggttaattcg ctgtagcgtg ccacgtcttt gatttcgtgg ccgttaattc gataaggaat
    24841 ggtattgagt accgagtttt cccgcaccac gccacgttgc aacgcggtca tcaccaccat
    24901 cggtttaacc gttgagcccg gttcaaacac gtcggtgatg gtacggttac gcatcgcctc
    24961 tttcggcgtg ccgctcagat tgttagggtt gtatgacggg ctgttagcca tcgccagcac
    25021 ttcacctgtg ttgacatcca ccagcacggc gctaccagat tcagccttgt taaaggccac
    25081 cgcgttgttc agttcgcgat aaaccagcgc ctgcaggcgt tcatcaatac tcagcgccag
    25141 gttgtgcgct gcctggctgt cagtagaaga aatatcttca attacgcgac catagcggtc
    25201 tttacgcaca atgcgctcac ccggctgccc ggtaagccat ttatcgaaac tcttctcaac
    25261 gccctcaatc ccttgactat cgacgttagt aaagccaatg aggtgagcag tcacttcgcc
    25321 ggatggataa taacggcgag attcttcacg cagatgaata cccggcagtt tcagtttttt
    25381 gatgtagtcc gccatgtcag ggtttacctg acgcgccaga taaataaagc gccctttcgg
    25441 gttggcgtta atgcgggcag aaagctgatc cagcggaata ttgagcgcgt tagccagcgc
    25501 cttccagcgg tcaccgacgc tgataccgcc agcgtcatgc acttctttcg ggtcagccca
    25561 aatcgctttt accggcacgc tcaccgctaa cgggcgacca gaacggtcag taatcatgcc
    25621 gcgggaggtg gaaacttgct gaacgcgaag agaacgcatg tcgccctctt tcaccagcat
    25681 atccggggag ataacttgta accacgctac gcgtccgagc agaaaagcca gcgccaggag
    25741 aatacagccg cataacaacg caaaacgcca actaataaag ttggcatgtt cttcctgacg
    25801 ttttggtttc tgcgttttcg ccgctgcttt catgcgtcgc gtttatcctt atttttgcac
    25861 tacgatattt tcttgtgacg gatcaacatg ctgcatttgc agcttttccg tggcgatcct
    25921 ttccacccgg ctatggtcgc cgagcgcatt ctcttcaagg atcaggttgc gccattcaat
    25981 gtctaaagca tctcgctcca gcaccagttg ttcgcgctga gcggtcagta aacgggtatg
    26041 gtgcgccgtg gttaccacgg tcaccgccgt caaaataatg caaatgaaca ggcagagtgg
    26101 cagcttccca aatcgcaaaa gatcgtcacc gataacacca ggcaatgcat ggcgctcgtg
    26161 gcttcccatc gatcctttaa ctttgcttag agcttctgtc actctgctga tcatgcgttc
    26221 gtcctctctg cgatacgcag aactgaacta cgggcacgag gattctcagc cacctcttct
    26281 tcgcccggca ttaacttgcc taatgctcgc agctgacggc cacccagttt tttgagctgc
    26341 tcttcagtca tcggtaaccc tgccggaact tgcggaccgc ggctgttttc acgcataaaa
    26401 cgtttcacaa tacggtcttc cagcgagtgg aagctgatga tcgaaagccg cccacccggg
    26461 gccagcacgt tgagcgagct ttttagcgcc tgctctatct cctccagttc actgtttacc
    26521 caaatgcgca ccgcctggaa ggtacgggtc gcgggatgtt taaacttatc tttcaccggc
    26581 gttgcagcag ccacgacttc cgccagttct ttggtgcggg tcatcggctg ttcgcggtta
    26641 cgctcgacaa tggcgcgggc aatgcgtttg gcaaaacgct cttcaccata ggttttcaat
    26701 acccaggcga tatcggcttc ttctgcggtt tgtagccatt cagcggctga ctgcccacgg
    26761 gttgggtcca tacgcatgtc cagcggacca tcgcgcataa aggaaaagcc acgttcagca
    26821 tcatcaagtt gcggtgaaga gacgccaaga tcgaggagaa tgccgtcgat cttgccgata
    26881 agatcgcgct cggcaacgta ttcgcccagc gcggagaaag gtccgtggat gatggagaag
    26941 cgcggatcat caatagtctt cgcaacggcg atagcctgcg ggtcgcgatc gatcgccagc
    27001 aaacgcccct cttcgccaag ctgcgagagg atcagacgtg agtgaccacc gcgaccaaaa
    27061 gtcccatcaa tgtagatgcc atcaggacgg atattgaggc cattaacggc ttcatccagc
    27121 agcaccgtag tatgtttata gttttccatc attttataga gacaagtcct gcagtcgctc
    27181 cgataagtct ccagtagcca actgctctgc gtcgatatct tccttgacct gttgatgcca
    27241 agttgtttca tcccacagct caaacttgtt gaactgtcca accagcatca cttcttttgt
    27301 cagcccggca tgttgccgca gtactggcgc gattaacaat cgacctgcgc catccatctg
    27361 acattcgctg gcatgaccta acagtaggcg ctgcacacgg cgctcaactg ggttcatgct
    27421 cgacagacgc gataattttt gctcgataat ttcccattca ggcagggggt aaagcagcag
    27481 gcacgggtga tgaatgtcaa tggtgcaaac catttgaccg gcagcgttct caagcagctg
    27541 ttcccgataa cgggtaggca ctgataagcg ccctttgctg tcgagattga ctaacgttgc
    27601 tccccggaac atgccagcct caccccttat tcccactttg ccccacaatt tcccactgaa
    27661 aggagtttac ggagcggagg aaaagcttgt caagccagtc acaaggcata ccgaggtaaa
    27721 aaacccgatg tttacggcta atatcagcgt tgtttatttt acgtccaacg cgcgaagcaa
    27781 attaacgtta tgaatagctg taagaaaaaa tccctcatcg tcatcactgt tttaaaatga
    27841 ctcactattt tccacagcaa atataaagtg tcagtttgcg acgcgagcgg cattttagga
    27901 catatcttcc ccggttaaca gtccttgtta cgtctgtgtg gcgcttgatg ccagcgggtt
    27961 tgcgcaaaag caaagaaaag tgtttgttaa atcggcaatt catcgccgca tgtaacaaaa
    28021 taatgcaaaa acgcgctgtc gatatcactt aattattgtg aatttcagct ggtgagttaa
    28081 ttaacgggcg ggtttaaaac catttatcaa taatagtcag gaatagtctt atttacttta
    28141 agcatattga tgtccagtcc cgtactctac gcgccagagg gaaattcacc tggcgcgtat
    28201 ttttgttcgc ggcttagcta cggctgagca caccgcggcg atagagatta cgtttaatgc
    28261 gcgttaaacc aggttttggc ttacgcggtt cgtccaggct tgccaggaca atctccagca
    28321 cacgctctgc gacatcgcgg tgacgttgag ccactgccag caccgggcac tgtaagaagt
    28381 cgagcagttc gttatcgcca aaggtggcaa ttgccaggtc agaaggcagt ttaccatcgc
    28441 gacgtagcgt gacatccatc accccttgca acaacgcaaa cgacgttgtg aacagcgcct
    28501 gcggcatcag atgcgtttcc agccattttt cgaataactg ggcagccgcc tcccgctcat
    28561 agctgttggc atacaggaaa tgcacttcgc gcggatcatc tttccaggca gtacggaaac
    28621 cttgttcacg caggaagctg acagaaagct ccggcagcgc gccaagataa agcaccgtct
    28681 cggcgggaaa cttacgtaac tcttccgcca gcatttcggc atcatcctga tcggcaccaa
    28741 ccacgctggt gaaatgttca cgatcgaggg cgcggtccag cgcgacaatc gggaacgggg
    28801 cgttagccca gcgttgataa aaaggatgct caggtggcaa cgacgtcgaa acaataatgg
    28861 catcaacctg acgctgtaaa aggtgctcaa tgcagcgcat ttcgttgtct ggctgatctt
    28921 ctgagcaggc aatcagcagt tgataacccc gttgccgcgc ctggcgctca agatagttag
    28981 cgatgcgggt atagctggtg ttctccagat cggggatcac aagaccaata gaacgtgtgc
    29041 gtccagcacg aagcccagct gccacggcgt tcgggtggta attgtgctca cgcaccacag
    29101 ccatgacttt ttcaacggtt ttgtcgctca cacggtattg cttcgctttg ccgttaataa
    29161 catagcttgc agtggtccgc gacactcccg ccagccgagc gatttcatcc agtttcacaa
    29221 ttgccccttg cgtaaaatgt aaaaaccata gccattgtac tggtatgggt taaattcatt
    29281 aacatctaag cgcagaaaat taactgcggc aactgctttt attccaggtt cccactgatt
    29341 tcgcaaaaaa agcccagcgt gacatgttgg gctgcaaatt gcacactgag atcattctca
    29401 acgcattatt ttatcgccgc gcgaaagtcc gaccacacca gagcgagcaa cttccacaat
    29461 tttcgccacc tcgcgaatcg atgctaaaaa tgcatcaagc ttatcgctgg tgcctgctaa
    29521 ttgaacggta taaagcgagg gggtgacatc gataatttgc ccacggaata tttccgtatt
    29581 acgtttcact tcgtcacgcc cgtaaccgct ggcctgaatt ttcaccagca taatttcccg
    29641 ctcaacatgc gcgccctgcc ccaactcact cacgcgcaag acatcgacca gcttgtgtaa
    29701 ttgcttttcg atctgctcaa gtactttttc atcgcccacg gtctggatgg tcatacgcga
    29761 taatgtcgga tcgtcggttg gcgcaacggt caggctttca atgttgtagc ctcgctggga
    29821 aaaaaggcca atcacgcggg ataacgcgcc tgattcattt tcgagtaaga ctgataatat
    29881 ccggcgcata atcaggttct ctccgttttg cttaaccaca tttcatccat tccgcccccg
    29941 cgaatctgca tcgggtagac gtgctcactg ccatcgacgg taacatcaac aaacaccagg
    30001 cgattattgc gcacctgttc cagcgcctcg ctaagtttgc tttccagctc atgcggatga
    30061 gagatctgga tcccgacgtg accataggct tccgccagac ggacgaaatc gggtagtgat
    30121 tgcatataag attgtgaatg acggccggaa tagatcatgt cctgccactg tttcaccatc
    30181 cccagatagc ggttattgag attcaccacc agtacgggca actcgtattg caacgcggta
    30241 gacagttcct gaatgttcat ctgaatactg ccgtcgccag tgacgcaaac cacggtttct
    30301 tctggcaacg ccattttgac gcccagtgcc gcaggtaaac caaaacccat cgtgccgagg
    30361 ccaccggaat tgatccagcg acgcggtttg tcgaatggat aataaagtgc agcaaacatc
    30421 tggtgctgcc cgacatcgga cgtcacgtaa gcgtctccct tcgtcaaccg ccaaagagtc
    30481 tcgatcaccg cctgcggttt aatcttttca ctgtgagtgt catatttcag gcactgacga
    30541 gcgcgccact gttcaatttg ctgccaccag tcgcggatct catccagtgg ttgatgggcg
    30601 gattcttgcg acaagagttc aagcatttgt tcgaggacct ggcgagcatc ccccacaatc
    30661 gggatatccg cagtcacggt tttagaaatg gaagtaggat caatatcgat atgcagaaca
    30721 gtggcatttg ggcagtactt tgccagattg ttcgtcgttc ggtcatcaaa tcgtaccccg
    30781 acggcgaaaa tcacatccgc gttatgcatc gtcatattgg cttcgtaggt accgtgcatt
    30841 cccagcatgc ccagtgcctg acgatgcgtt gccggaaacg cccccagccc catcaatgag
    30901 gaaacaacgg gcagattcaa cgcctccacc gtttctttca actgctgatg gcagcccgcc
    30961 atgattgccc caccgcctac gtagacaacc ggtttttttg ccactaccag cgtttgcaga
    31021 gcacgcttaa tttgcccttt atgtccggta gtagtgggat tgtaagaacg catactgacc
    31081 gactccggcc agacataggg taatttgttc gccggattaa gaatatcttt cggtaaatca
    31141 acgactactg gtccaggacg accacttgcc gccagccaga aagccttttt cagcacctgc
    31201 ggaatgtctt ccgtttgctt aaccagaaaa ctgtgtttaa ccactggtcg cgaaatcccc
    31261 accatgtcgc actcctgaaa ggcatcgtaa cctatcaacg aggtcgctac ctgcccggaa
    31321 aggacaacta atggaatgga atccatataa gcggtggcga tgccggtaat cgcattggtc
    31381 gcccctggac ccgacgttac cagcacgacg ccgacttccc cggtcgcgcg cgccagacca
    31441 tcggccatat gcactgccgc ctgctcatga cgaactaaaa catgatcgat accacccacg
    31501 gtatgcaatg catcgtaaat atcaaggact gcgcctccag gataaccgaa tacttgttta
    31561 acgccctgat cgataagcga tcggacgacc atctcggctc cagacaacat ctccatggcc
    31621 tgcctcactg tttgatggaa aaaatgtgta aaacacatta accgtccgat cttgcttaag
    31681 caattggcag ccagagacat aaacgcaggg taataagaat aaacaggagg aaagatgaaa
    31741 agaaacgata aaatcctcca ttacgaagga ttaaattgat aataaatcgg ctgaatccca
    31801 caacttacag caatttctct atttttttaa ttaatcctaa aatagagagc ccacacattc
    31861 agaataaaat tctacattca ataaaaaatg cagaataaac cagacattca tgtctgacct
    31921 attctgcatt cagttagcgt ttgcaaattg agactaattg ttcttccatc cactgatggc
    31981 ctttatcgcg cccggcagct tcatgccatg agagataaca ggttctgctg ttttgtttta
    32041 acggcagcgg taatacctgt aattctaagg attcagcgaa ctcttcagcc agccaacgcg
    32101 gcgcaatagc gaccaaatgc gtttgcgaca ccacgctaag tacgctcatc attgccatgc
    32161 cctgatacgc gatactggct tgcttatcta ccgtgtcata ccaaggttga ctaaatgacg
    32221 cgaaacgatc gagcgaaacc gccgcatgtt gttcgttata aacatcatgt ttcagtaacg
    32281 ggcctttaat tgttggatga tttttgctgg ctaccagcac catttcatct ttaaataatg
    32341 gcacgctggt aaattcagga cgatggaagt cttcataact aatcacaaac tccgtttcct
    32401 gataacgcag ctgatgttca gtgttctgat ttaatgaaga cttgaacata acatgtatat
    32461 ttggcgcaat ctgctcaatg tgattataaa tctgcgaggt cagaatgctg tctaacgggc
    32521 tgcaaacaca aagatgaaat acacgttcac tactcgcggg ttcaaaacct gaaccaggca
    32581 attcattttg tactagttgc aatgcctggc gaactgaacc aaaaagttga aatgcgcgag
    32641 cagtcggttg aataccacgg ccataacgaa caaaaagctc gtcattaaac atcaccttca
    32701 ggcgtgcaac agcgttactg accgcaggtt gcgacatacc cagaacatga gcggcacggg
    32761 taatgttttg ctcctgcatc acggcatcga aaacggttaa taagttgaga tcgaccatgc
    32821 gtagctgtgg cttgcttaac tccgccgtct ctgaatgatc tgtttgtacc tctggcatac
    32881 ttaactccac tgtcacactt aactcccttt cccttattgg aatgcagaga aataatcctg
    32941 aagaatatga tttatc
//
LOCUS       DAJVUK010000028        32313 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.028, whole genome shotgun sequence.
ACCESSION   DAJVUK010000028 DAJVUK010000000
VERSION     DAJVUK010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32313
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.028"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            197..991
                     /gene="panB"
                     /locus_tag="OQQ57_001255"
     CDS             197..991
                     /gene="panB"
                     /locus_tag="OQQ57_001255"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000805487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HCS1956086.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVADIAYHTASVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            1003..1854
                     /gene="panC"
                     /locus_tag="OQQ57_001256"
     CDS             1003..1854
                     /gene="panC"
                     /locus_tag="OQQ57_001256"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HCS1956087.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIIAIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKIVELA"
     gene            complement(2146..3042)
                     /gene="rpnC"
                     /locus_tag="OQQ57_001257"
     CDS             complement(2146..3042)
                     /gene="rpnC"
                     /locus_tag="OQQ57_001257"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnC"
                     /protein_id="HCS1956088.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQGKPDKKMAFRMMRYSIAAM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
                     GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKG
                     MSREDVAEMTNLSLAEIDRLIN"
     gene            3316..3696
                     /gene="panD"
                     /locus_tag="OQQ57_001258"
     CDS             3316..3696
                     /gene="panD"
                     /locus_tag="OQQ57_001258"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HCS1956089.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(3700..4900)
                     /locus_tag="OQQ57_001259"
                     /pseudo
     CDS             complement(3700..4900)
                     /locus_tag="OQQ57_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001727225.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
     gene            complement(4995..5435)
                     /locus_tag="OQQ57_001260"
     CDS             complement(4995..5435)
                     /locus_tag="OQQ57_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCS1956090.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRYEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(5540..6310)
                     /locus_tag="OQQ57_001261"
     CDS             complement(5540..6310)
                     /locus_tag="OQQ57_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1956091.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLATTFGVLVVFIVVFYLICWSLIQRGRGLRS"
     gene            complement(6307..7233)
                     /locus_tag="OQQ57_001262"
     CDS             complement(6307..7233)
                     /locus_tag="OQQ57_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1956092.1"
                     /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKLETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            7342..8004
                     /gene="can"
                     /locus_tag="OQQ57_001263"
     CDS             7342..8004
                     /gene="can"
                     /locus_tag="OQQ57_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HCS1956093.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPHFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(8045..8581)
                     /gene="hpt"
                     /locus_tag="OQQ57_001264"
     CDS             complement(8045..8581)
                     /gene="hpt"
                     /locus_tag="OQQ57_001264"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004204384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HCS1956094.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            8787..11177
                     /gene="gcd"
                     /locus_tag="OQQ57_001265"
     CDS             8787..11177
                     /gene="gcd"
                     /locus_tag="OQQ57_001265"
                     /EC_number="1.1.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein glucose dehydrogenase"
                     /protein_id="HCS1956095.1"
                     /translation="MAINNTGSRRLLVTLTVLFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGSILTWAGFNDPQEINGTLSADATPTEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPKLKTNESFQHVTCRGVSYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPKKDLSGADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN
                     GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK"
     gene            complement(11224..12774)
                     /gene="cueO"
                     /locus_tag="OQQ57_001266"
     CDS             complement(11224..12774)
                     /gene="cueO"
                     /locus_tag="OQQ57_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HCS1956096.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            12940..13287
                     /locus_tag="OQQ57_001267"
     CDS             12940..13287
                     /locus_tag="OQQ57_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HCS1956097.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            13392..14258
                     /gene="speE"
                     /locus_tag="OQQ57_001268"
     CDS             13392..14258
                     /gene="speE"
                     /locus_tag="OQQ57_001268"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HCS1956098.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENTAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPSGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
                     QYLQDALASQPS"
     gene            14274..15068
                     /gene="speD"
                     /locus_tag="OQQ57_001269"
     CDS             14274..15068
                     /gene="speD"
                     /locus_tag="OQQ57_001269"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HCS1956099.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(15105..15467)
                     /locus_tag="OQQ57_001270"
     CDS             complement(15105..15467)
                     /locus_tag="OQQ57_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HCS1956100.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="OQQ57_001271"
     CDS             complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="OQQ57_001271"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HCS1956101.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            18594..20447
                     /locus_tag="OQQ57_001272"
     CDS             18594..20447
                     /locus_tag="OQQ57_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HCS1956102.1"
                     /translation="MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAAVETQSTQ
                     LAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY
                     PANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL
                     GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSN
                     TVLTASPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP
                     FIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHN
                     GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA
                     TQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS
                     RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQRREAARERIQPASPEQRQ
                     AVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA
                     SPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER"
     gene            complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="OQQ57_001273"
     CDS             complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="OQQ57_001273"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HCS1956103.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="OQQ57_001274"
     CDS             complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="OQQ57_001274"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HCS1956104.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="OQQ57_001275"
     CDS             complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="OQQ57_001275"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008814576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HCS1956105.1"
                     /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHSI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="OQQ57_001276"
     CDS             complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="OQQ57_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HCS1956106.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
     gene            28303..29676
                     /gene="aroP"
                     /locus_tag="OQQ57_001277"
     CDS             28303..29676
                     /gene="aroP"
                     /locus_tag="OQQ57_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HCS1956107.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNSGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="OQQ57_001278"
     CDS             complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="OQQ57_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HCS1956108.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARVTMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGIWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
                     LTIYGALV"
     gene            complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="OQQ57_001279"
     CDS             complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="OQQ57_001279"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HCS1956109.1"
                     /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD
                     RKTDPGPAFDWARFRALVSKETT"
     gene            31209..32102
                     /gene="nadC"
                     /locus_tag="OQQ57_001280"
     CDS             31209..32102
                     /gene="nadC"
                     /locus_tag="OQQ57_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HCS1956110.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
BASE COUNT         7793 a         8786 c         7965 g         7769 t
ORIGIN      
        1 gccacgctac aacaggatgg aactatacca atagaagctg gtgagtttaa agccaccagt
       61 actttccagg taacctaccc ttaataagtc caccgcaccg ccatcatctg gcggtgcggt
      121 aattgataaa tcattgcccc caccaatgtg actgataaaa tgccaggcaa cacgacatca
      181 tttatcagga cacgttatga aaccgaccac cattgcttca cttcagaaat gtaagcagga
      241 taaaaagcgt ttcgcgacca tcaccgctta cgactacagc ttcgcgaaac tatttgctga
      301 tgaaggactt aacgtcatgc tggtaggcga ctcgctgggc atgacggttc agggtcacga
      361 ctccaccctg ccggtgaccg ttgccgatat cgcctaccac actgcctccg tacgtcgtgg
      421 tgcgccaaac tgcctgctgt tggctgacct gccgtttatg gcgtatgcca cgccggaaca
      481 agcctttgaa aacgccgcaa cggttatgcg tgccggtgcc aatatggtca aaattgaggg
      541 cggtgagtgg ctggtcgaaa ccgtaaaaat gctgaccgaa cgtgccgttc ctgtatgtgg
      601 tcacttaggt ttaaccccac agtcagtgaa tattttcggt ggctacaaag ttcaggggcg
      661 cggcgatgaa gcgggcgatc aactgctcag cgatgcatta gccttagaag ccgctggggc
      721 acagctgctg gtgctggaat gcgtgccggt tgaactggca aaacgtatta ccgaagcact
      781 ggcgatcccg gttattggca ttggcgcagg caacgtcact gacgggcaga tcctcgtgat
      841 gcacgacgcc ttcggcatta ccggcggtca cattcctaaa ttcgctaaaa atttcctcgc
      901 cgaaacgggc gacatccgcg cggctgtgcg gcagtatatg gctgaagtgg agtccggcgt
      961 ttatccgggc gaagaacaca gtttccatta aggagtcacg ttgtgttaat tatcgaaacc
     1021 ctgccgctgc tgcgtcagca aattcgccgc ctgcgtatgg aaggcaagcg cgtggcgctg
     1081 gtgcctacta tgggtaatct gcacgatggc catatgaagc tggtcgacga agccaaagcc
     1141 cgcgccgatg tggtcgtcgt cagtattttc gttaacccga tgcagttcga ccgcccggaa
     1201 gatctggcac gttatccacg gaccttgcag gaggactgcg agaagctaaa caaacgtaaa
     1261 gtggatttag ttttcgcccc ttcggtaaaa gagatctacc cgaacggtac tgaaacccat
     1321 acttacgttg acgttcccgg gctttcgacc atgctggaag gcgcgagccg tccggggcat
     1381 tttcgcggcg tttcgactat cgtcagcaag ctgtttaacc tggtccagcc ggacatcgcc
     1441 tgcttcggtg aaaaggactt tcagcaactg gcgctaatcc gcaaaatggt tgccgatatg
     1501 ggcttcgata ttgaaattgt cggcgtcccg attatgcgcg ccaaagatgg ccttgcgctc
     1561 agttcccgta atggttatct gacggcggaa caacgcaaaa ttgcgcccgg tctgtacaaa
     1621 gttttaagtt caattgccga caaattgcag gctggcgagc gggatcttga tgaaattatt
     1681 gccattgcag ggcaagaact gaatgaaaaa ggcttccgcg ccgatgatat tcagattcgc
     1741 gatgccgaca cgttgctgga agtctctgaa accagcaaac gagctgtaat tctggtagcc
     1801 gcctggcttg gcgatgcccg cctgatcgac aacaaaatcg tcgaactggc gtaatgcttt
     1861 tactctaaat aattcaagtt gcaggaaggc ggcaagcgag tgacaaattc gtcaggaacg
     1921 aatttgccca gccgcaggct ggccttcggt gagagacatg gatgtctctc attaatcccc
     1981 aggagcttac ataagtaagt gactggggtt agcgaacgca gacacagcac atgcaattta
     2041 aagtatgacg agtataactg gcgctacggc tgatggcgcc aattattaat ttgccccacg
     2101 tcatggcgat ggcgtctgta agcaattatt cataacgcag acaacttagt taatcagcct
     2161 atcaatctca gcaagagata aatttgtcat ctctgcaacg tcttcccgag acatcccttt
     2221 actcagaaaa cgctgggcga attcttgcct ttcctcctgt cttccctgct gaatcccctt
     2281 ctcaatccct ttctcttcaa accactgcgc cagcgtcatc atagactccc ctcccgtttc
     2341 cctgtctctc agcacaccat aaaacaaatc cgcttgttca gtatgaccgc gttgcagcat
     2401 atagttttgc atggcaacta actgacttcc gctagtgtac ccttcgtcaa tcagcgtgac
     2461 cagttgctcc agcaataaca ttaagtcgcg ctggcgaata tgtttttgca gtagttcgag
     2521 aatcgcaatc cgccgatgtt gcatgatttc gtcatccggt gtgatggtga tatccaccag
     2581 cgggaaagga ctgttataga cgcgtcgtgc cagctccggc gagtaaaata tatcaaacca
     2641 gcacattgag agcggataag gtgtggcctc gccctgataa aacagtatcg gcaccaccag
     2701 cggcagctta tcgtgatccg cctccagatg ccggtgcatg gcagcaatag aataacgcat
     2761 catgcgaaag gccattttct tatccggctt gccttggtgt tcaatcacaa catgcagata
     2821 accgggattg ccctgcattt gcacggaata gagcacgtcc gtgctgtgtc ctttcaggct
     2881 ctcttcaatg aaactccccg actctaaatg aagcgtgttg aggtcacaaa gttctcgtaa
     2941 ttccactggc aaatgtatct ccagaaagtc gcgagccgtc tccgcgtgca ttaaaaattg
     3001 tttaaacact gcatcatgcg gtgtggtact cggtgcatcc atcttccctg ccttccgtgt
     3061 tgtcttgcgt gaaggcagta tccagtcaag gcgtgccatc gtcagccacc tctttagtgt
     3121 ttaccgagca gcgttcagag aaatttcaat tggttacagc cgttacatgg cacgcttcgg
     3181 cacggtacgc aaactgctga tgtaaatgcc gtcagatgag tagacactaa acaaaaatcg
     3241 ggcaatactg cgtgagaatt tcctcaaagc aggcatcgcc tgcttcgtta acgacagggt
     3301 agaaaggtag aagttatgat tcgcacgatg ctgcagggca aactccaccg cgtgaaagtg
     3361 actcatgcgg acctgcacta tgaaggttct tgcgccattg accaggattt tcttgacgca
     3421 gccggtattc tcgaaaacga agccattgat atctggaatg tcaccaacgg caagcgtttc
     3481 tccacttatg ccatcgcggc agaacgcggt tcgagaatta tttctgttaa cggtgcggcg
     3541 gcccactgcg ccagtgtcgg cgatattgtc atcatcgcca gcttcgttac catgccagat
     3601 gaagaagctc gcacctggcg acccaacgtc gcctattttg aaggcgacaa tgaaatgaaa
     3661 cgtaccgcga aagcgattcc ggtacaggtt gcttgattgt tatccctgcg gctggttact
     3721 caccagccgc gacatcgtct ccagcgaatc cgttcttaag atataaagtc gttttagtaa
     3781 caacggatta tcccccggtt ttactttgcc tttcatggtt gtcaccgcca ggtgaaatcc
     3841 ggcatcgttt gctgccttca cggctttgtc attaaatccg ccaaacggat acgaaagata
     3901 ccagacatgc ggattaaatt gcgccagagc gcggcgtgaa cgtgcaaaat caaacagaat
     3961 attgtgttca ctacggctcg gtaatatggg gcggcgataa ccatccaccc gatgcaaaaa
     4021 atgggtatgt gactggaaat caaaaacatc gcgaatttcg ttaagttcag aaacgctcat
     4081 aaattgcagc gattttgggt cccacttctg cgggtgacgt ttgatgcgcg aggtaacaat
     4141 aaacgccgtc gccttcatgc catattgttt caacacggga tacgcatagc ggctcaccga
     4201 tttgaggcca tcatcaaagg taatcaccac cgctcgcgca gggagattga tcttattctt
     4261 cacgtaacct tccagctgca ccatgctcag tgtcgcgtat cccctgtcgc gcagccaggc
     4321 catctggtta ttgaaagcgc gtactgaggt ggtcgtcgaa gtatggcgaa aacgggtgtt
     4381 ttcttcatcg cgcagaatat ggtgataggt tagcaccggc aggccattat cgggttgggc
     4441 atccagcgcg ctgatatagg ccagtcgatc gccaatacgg atctgatacc aggtttgatt
     4501 taacctgtct ttcagtttat gcaaaatcgg gtagcgcaaa ttgtccgcca gtaccccata
     4561 atggcgcact gcccgcactc ggcgcgttat agaccggcgt atctttccag gtaattaagt
     4621 tctgattact cagcggcttg ttgaggtcac ccaaaccgtc ttcaactttt tgtcgcccct
     4681 gaactggctc gagatgccct ttatcgataa accctttacc aaagccaaaa ttaaatgcgt
     4741 aataacttgc ggcagtgggc tccacggcaa tgatttgccc ggcccgaata ttccccacgg
     4801 tcaccatctt gtcgccaatt tgcgcccaga tcgcagcatt ttcgatggtt tgcatataac
     4861 gggcaggtaa cgcggcacta acgcttgcgg taaacagcat cagcaggatg aataacagct
     4921 tgtttataca tgaaaaaata accgagggtg aaacaacgct tgtattgtag caaaagcgcc
     4981 atcagaatcg cgggttaata ctcatacaaa ttatgtttga ggacaaaagg cggatttttt
     5041 tgttgttggt gccaaagact actcacctcc ggcgcaccca gttcgacaat acgctcgcga
     5101 aactctgaac tggtcatggt ttcacggcaa gccatcatct gttcaattaa cggtaacgtg
     5161 acaccagaaa tcacttcata acgggagtgt ttatggctta ataatgaagc cacgcggtac
     5221 ggtggcgctc cggctatatc ggttaagaag atgacaccct caccagagtc cgcttcatgc
     5281 agagcatcgc acatcatgcg gctgagcata ttagagctta atccgcgcca gaaattcacg
     5341 gcccggcact gaagaagtgc cccatgtttt ttctccagcg catccagtat ctcttgcgcc
     5401 cggtcatcgt gacaggtaat tacccaacct aacatcgcct tcctccttag ccgaaaatca
     5461 gtctatcctg accattgttg ataaagggtg atagccgtca aaactcctct cccccgaatc
     5521 cagaggagag gaaatagcct tagctacgca aaccacgtcc acgttggatc agcgaccaac
     5581 agatcaaata aaacaccaca ataaagacca ccagtacgcc aaaggtagtg gccagcggca
     5641 catcatttat accgaggaag ccgtagcgga aaccactgat catataaacg attgggttca
     5701 ggtgcgacag cccttgccag aacggcggca acaaagtcag ggagtaaaac accccgccca
     5761 aatacgtgag tggcgttaac acaaaggttg gcaccaggct gatgtcatcg aacgttttgg
     5821 caaacacgcc gttcagcaaa cccgcaaggg agaatagcac cgccgtgagc accagggtta
     5881 aggcaacgaa tacccacgaa tgcacctgaa acggcacaaa aaacagtgaa attgccgtca
     5941 ccagaatgcc aacaaacaga ccacgcgcca cgccaccgcc gacatatccg gcaataatga
     6001 cgtgagtcgg aaccggcgct accagcagct cttcaatatt acgctggaac ttggcaccaa
     6061 aaaatgatga cgcgacgtta gcgtaggcat tggtgatcac cgacatcatg atcagccccg
     6121 gtacgatgaa ctgcatatag ctgaagccat gcatatcgcc aatacgcgaa cctatcaggt
     6181 taccgaagat aataaagtaa agggtcatgg tgatgactgg cggcaccagc gtctgcaccc
     6241 agatacgcat aaagcgatgg atctctttcg cccagatgct ttttagcgcc acccagtaaa
     6301 gatgcatcat gcgcgatctc cttgtttttc attaaccagt gaaacaaaca gctcttccag
     6361 acggttagct ttgttacgca tacttaatac ctgaatgccc tgctcactta actgcgtaaa
     6421 tacgctgttg atcccctgct cacgcagcac ttcaacttcc agcgtcgcgg tatcgaccag
     6481 tcgatactga tagccatcga gcttcggtaa cgggcttttc ggtgcgagat cgagaataaa
     6541 ggtttccaat ttcagcttcg ccagcagcgc cttcatcgag gtattttcca ccagctcacc
     6601 gtgttgaata atgccgatat tgcggcacag catttctgct tcttccaggt agtgtgtagt
     6661 gagaatgatg gtggtgcctt tgtcgtttaa atccttcaaa aagccccaca ttgagcggcg
     6721 aagttcaata tccacgcctg cggtcggttc gtcgagaatc agtagtttag gttcatgcat
     6781 taacgcacgg gcaatcatta aacggcgctt catcccgcca gataacatac gcgcacgttc
     6841 gttgcgtttt ccccataaat cgagttgttt gagatatttt tcgctgcgga tgtacgcttc
     6901 tttgcgctcc acgccgtagt accctgcctg attcaccaca atttgctgca cggtttcaaa
     6961 cgggttgaag ttaaattcct gcggcaccag tcccaactga cgtttagcgt tcacgacatc
     7021 cttctcgaga tcgtaaccaa atacgctgac ccgcccggag gttttattta ccagagagct
     7081 gataataccg atagtggtcg atttcccggc cccgttcggc ccgagaagcg cataaaaatc
     7141 acccgcttcg acctgcaaat ctattccacg aagcgcctga acgccgcctg gataggtttt
     7201 tttaagctgt tgaagttcca gtgcaatggt cataaatttt tacttacctt acgttcttac
     7261 actttatctg tggtttaaat cgtcccggag ttaccctata ttagccaaac gtaattattt
     7321 ggttacaggt cgttaacctc catgaaagac atagatacac tcatcagcaa caatgcacta
     7381 tggtcaaaaa tgctggtgga agaggatccc gggttttttg agaaactggc acaagcgcaa
     7441 aaaccgcact ttctatggat tggatgttcc gacagtcgcg ttcctgcaga acgtttaacc
     7501 ggtcttgagc cgggcgaact ctttgttcac cgtaatgttg ctaacctggt cattcacacc
     7561 gacctgaact gcctttccgt ggttcagtat gcagtggatg tactagaagt tgaacacatt
     7621 attatctgtg gccactacgg ttgcggcggc gtacaagccg cagttgaaaa cccggaactg
     7681 gggcttatca acaactggct gctgcatatc cgcgatatct ggttcaaaca tagctcattg
     7741 ctcggcgaaa tgccgcaaga gcgccgtctg gataccttgt gtgaactgaa cgtcatggaa
     7801 caggtgtata acctaggcca ctccaccatt atgcaatcag cgtggaaacg cgggcagaaa
     7861 gttaccattc acggctgggc ctatggcatt cacgacggct tgctgcgtga tctggatgtt
     7921 actgccacca accgcgaaac ccttgagcaa cgttaccgtc acgggatttc caacctcaag
     7981 ctgaaacacg ccaaccacaa ataaaaatgc catgccggat gcaacacatc cggcaacttc
     8041 acacttactc gtccagcaga atcactttgc cgatatacgg cagatgacgg taacgctgtg
     8101 cgtaatcaat gccgtaaccc accacaaact catccgggat cgagaaaccg ataaattcta
     8161 ccgggacgtt cacttcacga cgggacggtt tatccagcag cgtacaaatc gccagcgact
     8221 tcggttcgcg caggcttaag atctcacgca ctttcgacag tgtattcccc gagtcgatga
     8281 tatcttcaac aatcagcacg tccttgccac ggatatcttc atccagatct ttgaggattt
     8341 tcacatcacg ggtggtggac atgccgctac cgtagctgga ggcggtcata aagtcgactt
     8401 catgagatac ctgaacttca cggcacaggt ccgccataaa cataaatgag ccacgcagca
     8461 gacccaccag caccatatcg ctgccgctgt ctttgtaacg ctcagtaatc tgacgaccca
     8521 gttcggcgat acgcgcttta atctccgctt cggggatcat tacttctaca gtatgtttca
     8581 tatctctaac catatgattt aaaaacaaat cacttcgcac gggcaggttt tggcaccgca
     8641 acaaagcgca agacacgcag tataccagta aaactattca ttcgcggaat ctgttaataa
     8701 agctcgaatt gtgatgacga tcacacatgt taaaacctat aattaattgc tactaaaata
     8761 ttaatgaatt gaaatggtgt ctctttatgg caattaacaa tacaggctcg cgacgattac
     8821 tcgtcacgct aacagtcctt tttgcagcgc tttgcgggct gtatctactc attggcggag
     8881 gctggctggt cgcgattggc ggctcctggt actaccctat cgctggcctt gtgatgctcg
     8941 gcgtcgcctg gatgctgtgg cgcagtaaac gtgccgcgct ttggctatac gccgccctgc
     9001 tgctcggcac catgatttgg ggcgtctggg aagttggttt cgacttctgg gcgctgactc
     9061 cgcgcagcga tattctggtc ttcttcggca tctggctgat cctgccgttt gtctggcgtc
     9121 gcctggtcat tcctgccagc ggcgcagttg ccgcactggt ggtggcactg ctgattagcg
     9181 gtagtatcct gacctgggcc ggatttaacg atccgcagga aatcaacggc accttaagcg
     9241 ccgatgccac acctacggaa gctatctcac ccgttgccga tcaggactgg cctgcctatg
     9301 gtcgcaatca ggaaggtcaa cgcttttcac ctctgaaaca aattaacgcc gataacgtcc
     9361 ataatctgaa agaagcctgg gtgttccgta ctggcgatgt gaagcagccg aacgatccgg
     9421 gcgaaatcac caatgaagtg acgccgatta aagtgggcga caccctttac ctgtgtaccg
     9481 ctcaccagcg cctgtttgcg ctcgatgccg ccagcggcaa agagaaatgg cattacgatc
     9541 ctaagctgaa aactaacgag tctttccagc acgtaacctg ccgtggcgtc tcttatcatg
     9601 aagccaaagc agaaacggct tcgccggaag tgatggcgga ttgcccgcgt cgtatcattc
     9661 ttccggtcaa tgatggtcga ctgattgcga ttaacgctga aaacggcaaa ctgtgcgaaa
     9721 ccttcgccaa taaaggcgtg ctcaatctgc aaagcaatat gccagacacc aaaccgggtc
     9781 tgtatgaacc gacttcgcca ccgattatca ccgataaaac catcgtgatg gcaggttcag
     9841 ttaccgataa cttctcaacc cgcgaaacgt ctggcgtgat ccgtggtttt gatgtcaaca
     9901 ccggggagct gctgtgggct tttgatcccg gcgcgaaaga tccgaacgca atcccgtctg
     9961 acgaacacac ctttaccttt aactcgccaa actcctgggc accagcggcc tatgacgcga
    10021 agctggatct ggtctatctg ccgatgggcg tgaccacgcc ggatatctgg ggcggtaacc
    10081 gcacaccgga acaggaacgt tatgccagct cgattctggc gctgaatgcc actaccggga
    10141 aactggcgtg gagctaccag accgttcacc acgacctgtg ggacatggat cttccggcac
    10201 agccgacgct ggcggacatc accgttaatg gtcagaaagt gccagttatt tacgctccgg
    10261 cgaaaaccgg caacattttt gtgctcgatc gtcgcaatgg cgaactggtg gttccggccc
    10321 cggaaaaacc ggtgccgcaa ggtgctgcga aaggcgatta cgttactccg acccagccgt
    10381 tctctgaact gagcttccgt ccgaagaaag atttgagcgg tgcggatatg tggggagcca
    10441 ccatgtttga ccaactggtg tgccgcgtga tgttccacca gatgcgctat gaaggcattt
    10501 tcacgccgcc atctgaacag ggcacgctgg tcttcccggg taacctggga atgtttgaat
    10561 ggggcgggat ttccgttgat ccaaatcgtg aagtggcaat tgccaaccca atggcactgc
    10621 cgtttgtttc gaaactgatc ccacgcggtc cgggtaaccc gatggagcag ccgaaagatg
    10681 ccaaaggcac gggtacggaa tccggcattc agccacagta cggtgtaccg tatggtgtca
    10741 cgctcaaccc gttcctctca ccgtttggtc tgccgtgtaa acagccagca tggggttata
    10801 tctcggcgct ggatctgaaa accaatgaag tggtgtggaa gaaacgtatt ggtacgccgc
    10861 aggacagtat gccgttcccg atgcctgtac cggtgccgtt caatatgggt atgccgatgc
    10921 tgggcgggcc aatctccacg gcgggtaacg tgctgtttat cgccgctacg gcagataact
    10981 acctgcgcgc ttacaacatg agcaacggtg aaaaactgtg gcagggtcgt ttaccagcgg
    11041 gtggtcaggc gacgccaatg acctatgaag tgaatggtaa gcagtatgtg gtgatctccg
    11101 caggcggtca cggttcattt ggtacgaaga tgggcgacta tattgtggct tatgccctgc
    11161 cggatgatgt gaaataacca taatgcccgg agagatccgg gcatatttcc gaatacggtc
    11221 tttttatacc gtaaacccta acatcatccc cgtatcttca tgctccagca gatggcagtg
    11281 cgccatataa gcatgttctt tcggtgcgtc gtgattaaac ttcaccagca cttcactgac
    11341 attgccttct accttaacgg tatctttcca gcccgcgcga tgagccgctg gcggtttgcc
    11401 attttctgac aagatacgga actgcgtgcc gtgaatatgg aacggatgca gcatcatgtc
    11461 gcccacgcca gagataaccc aacgttcgta ctgccctttc gccgccgcaa acatcggctt
    11521 attcatatca aacgcctgac cgttgatttt attggcatgg tggaaatcga acttcccgcc
    11581 gtggttcata tgattcatat taccgtgccc catatggccc atcatctggc tgtgatccat
    11641 tccggccatc gcctgatcgc catatttctc cattagcatc tgcataccca tcatatcgag
    11701 catcgggtcc atagaaagtt gcagcttgcg taccgtcagc ccttccagcg aaggtaacgc
    11761 aggcaggcta cttaatgtgt ctggcaaagc accggaggca ctaatagcaa tcggctgaat
    11821 ccgcattacc ggatgcggct tgtcaaacgg cgcaatcgcc atccccatct ggctgaccgg
    11881 tagcgtcacc aggtcaaagg gtttgttgtc gttaacctcc accagcactt caaaacgctc
    11941 gcccatcagc accggcagct cgctcacctt caccggttca ggtagcagac caccgtcgct
    12001 ggcaatcaca tacagcgggc gattgtcgct ggtggcgaaa ttgagcgagc gggcattaca
    12061 gccattgagc aaacgcaggc gcagccaacc acgcggggca gcgtgttgtg ggtagattgc
    12121 accgttggtc agcagcgtat cgccaaacca gcccacggcg gcggtcatca catccagttg
    12181 ataatcaatc tgcccatcag cgttaaattt tttatcctga acaatcaccg gaacatcatc
    12241 gataccccac tgttttggca gcattaattt caggatctcg tcatcttcaa ttaccaccag
    12301 cccagccaac cccatcgcca cctgtcgccc agtcttgcca tgttgatgtg gatggaacca
    12361 gcaagtagcg gcaggttgat caacgttcaa cgtcaccgag cgcttgccac ctggcggaat
    12421 aattccctgc gggccgccgt cgacttcacc cggtacttcc agcccgtgcc agtgcaacgt
    12481 cgtctcttcc gtcagttggt tatagatatc aaccgttacc gctttgccgc gctgtaattt
    12541 caccgccggc cccagcagat tgccgttata gccccaggta gttgcagttt tctcgccaaa
    12601 ggtagactga cctgcgccaa tagttaactg aatgcgatta cgggcatcgg tcgtgagcaa
    12661 atcagggatc ggtaacgttg ggcgttccgc cgcaaagact gcgcggctcc acagcggcaa
    12721 ggctgaagcc acacccagcg cgacggaata ttttaagaaa tcacgacgtt gcatagttat
    12781 ttccttattc ttaagcaggc gaaacaaaat caaacgttga gcatagtcct tccccttacg
    12841 ggaaggtcaa gccgcagaca caatttaatc gacaataatg gtcgtcgcct cgctcgcagt
    12901 gtgctaacgt ttatcttctt taagcccctg gtagaagcaa tgaagacgtt tttcagaaca
    12961 gtgttattcg gcagcctgat ggccgtttgc gcaaacagtt acgcgctcag cgagtctgaa
    13021 gccgaagata tggccgattt aacggcagtt tttgtctttc tgaagaacga ttgtggttac
    13081 cagaacttac ctaacgggca aattcgtcgc gcactggtct ttttcgccca gcaaaaccag
    13141 tgggatctca gtaattacga caccttcgac atgaaagccc tcggtgaaga cagctaccgc
    13201 gatctcagcg gcattggcat tcccgtcgct aaaaagtgca aagccttggc ccgcgattcc
    13261 ttaagcctgc ttgcctacgt caaataatcc ctgatacctt tttgtagaaa tattgaccgt
    13321 gcatccgcgg tcaatgttag ctattatgtt gcgccctttt ttacgggtgt taacaaagga
    13381 ggtatcaacc catggccgaa aaaaaacagt ggcatgaaac gctacacgac cagtttgggc
    13441 agtactttgc ggtagataac gttctgtatc atgaaaagac cgatcaccaa gatctgatca
    13501 tttttgagaa cactgcattt ggtcgcgtaa tggcgctgga tggcgtagta caaaccaccg
    13561 agcgcgacga gtttatctat catgagatga tgacccatgt tccgctactg gcccacggtc
    13621 acgcgaaaca tgtgctgatt atcggcggcg gcgacggtgc catgctgcgt gaagtaaccc
    13681 gacataaaaa cgttgagtca atcacgatgg tagaaatcga tgcgggtgtc gtgtcgttct
    13741 gccgtcagta tctgcccaac cataacgccg gtagctacga cgatccgcgc tttaagctgg
    13801 tgatcgacga tggcgtcaat ttcgttaatc aaaccagcca gacctttgat gtcattatct
    13861 ccgactgcac cgatcctatc ggtcccggcg aaagtctgtt cacctcagca ttttatgaag
    13921 gctgcaaacg ttgcctgaat cctagcggta tcttcgtcgc acaaaacggc gtctgctttt
    13981 tacagcagga agaagccatc gacagccatc gcaaactcag ccattacttc agcgacgttg
    14041 gcttttatca ggcggcgatc ccgacctatt acggcggtat catgactttt gcatgggcga
    14101 cagataacga cgccttacgc catctctcaa ccgaaattat tcaggcgcgt tttctcgctt
    14161 ctggcctgaa atgccgttat tacaatccgg caatccatac ggcagctttt gccttacctc
    14221 agtatctgca agatgcactg gcttcacagc cgtcctaagg agaagataag aaattgaaaa
    14281 aactgaaact gcatggcttt aataatctga ccaaaagtct gagtttttgt atttacgata
    14341 tctgctacgc caaaactgcc gaagagcgcg acggttatat tgcttatatc gatgaactct
    14401 ataatgccaa ccgtctgacc gaaatcctgt cagaaacctg ttccattatc ggggccaata
    14461 ttcttaacat cgcccgccag gattacgaac cacagggtgc cagcgtcact attctggtga
    14521 gtgaagaacc ggttgacccg aaactcatcg acaaaacaga acaccccggc ccactgccag
    14581 aaacggtcgt tgcccatctc gataaaagtc atatttgcgt acatacctac ccggaaagcc
    14641 atcctgaagg tggtttatgt accttccgcg ccgatattga agtctctacc tgcggcgtga
    14701 tttctccgct gaaggcgctg aattacctga tccaccagct tgagtccgat atcgtaacca
    14761 ttgattatcg cgtgcgcggt tttacccgcg acattaacgg tatgaagcac tttatcgacc
    14821 atgagattaa ttcgattcag aactttatgt ctgacgatat gaaggcgctg tatgacatgg
    14881 tggatgtaaa cgtctatcag gaaaatatct tccataccaa gatgttgctt aaagagttcg
    14941 accttaagca ctacatgttc cacaccaaac cggaagattt aaccgacagc gagcgccagg
    15001 aaattaccgc tgcgctgtgg aaagaaatgc gcgagattta ttacgggcgc aatatgccag
    15061 ctgtttaacg gctctggcgg agctccaggc tccgccagat ttatttactt ctgctgcacg
    15121 aaattgcggt aagccgccac gacctgcaga aaatcctcaa cgccgcatag cgacaggctt
    15181 tcttcgtcgt agtagttcat cccctcttcc atttcatcgc cagcgaattc cagttgattg
    15241 gcgcgaacca tcacctcttc accgtccatc cacagggtgt attcatgccc tgcccgttgc
    15301 caggaccgtt cgctaccttt cagtgcgtgc gctgcttgtt ccacttcatc aagcaaggcc
    15361 aggttttctt tcacctcttc attaaaccag tgcccgacca cttcatgccc catggacata
    15421 cgcaccttta ccactccggt aatatcgcgc agaaattcgt aatccatagt gtgttcctct
    15481 gctcccggca atgcgccgaa atcgcattgc gccattgatg taattatcgc agccttaccg
    15541 gagaaaaaca gcggaacggc gatggtttag aaataaaaaa tgcccgggaa tctcattcac
    15601 cgggcattgt gtcgtttatg cgcagcgcgt gcgcttactt attacaccgc agtctggaaa
    15661 atcaccccat cggctttttc ggtgtactga gaaagttggt tgaagttcag ataacgataa
    15721 gtatcaacgg cagttttatc tacttgcgca acgtaggtct ggtactcttc cggcgtcggc
    15781 agtttgccaa tcagcgccgc aacagccgcc agttctgcag aagccaggaa gacattcgcg
    15841 ccagtcccca gacggttcgg gaagttacgg gtagaggtgg aaaccaccgt cgcaccgtct
    15901 gctacacgcg cctggttacc catacacaga gaacagcccg ggatctcgat acgagccccg
    15961 ctcttaccga agacgctgta gtagccttct tcagtcaact gtgcggcgtc catacgggtt
    16021 ggcggtgcca cccacaggcg ggtcggcaac tggcctttat gcgcatccag cagtttaccc
    16081 gcagcacgga agtgaccgat gttagtcatg caagaaccga taaatacttc gtcgatcttc
    16141 tcgccctgta ccgcagacag cggacgcgcg tcatccgggt cgttcggagc acacaggatt
    16201 ggctctttaa tatccgccag atcgatgtca atcactgccg cgtattccgc atctgcatct
    16261 gcttccagca gctcaggatt cgccagccat ttttccatgc cctgaatacg acgttccagg
    16321 gtacgacgat cgccgtaacc ttccgcgatc atccacttca gcaggacgat attagagtta
    16381 aggtattcga tgattggttc tttgttcagc ttgatagtac aaccagcggc agaacgctca
    16441 gcggacgcat cggtaagctc aaaggcctgc tcaactttca gatccggcag accttcaatt
    16501 tccagaatgc ggccagagaa gatgtttttc ttgcctttct tctcaacggt cagcagacct
    16561 tgtttgatgg catacagcgg aatggcgtgt accagatcgc gcagggtgat gcccggctgc
    16621 attttgcctt tgaagcgcac cagaacggat tccggcatat ccagcggcat tacgcctgtt
    16681 gcggctgcaa atgccaccag accagaaccc gccgggaaag agataccgat cgggaaacgg
    16741 gtatgggagt cacctccggt accgacggta tccggcagca gcatacggtt cagccaggag
    16801 tggattacgc cgtcacccgg acgcagcgac acaccgccac ggttcataat gaagtccggc
    16861 agcgtgtggt gcgtgttcac gtcaactggc ttcggatacg ccgcggtgtg gcagaaagac
    16921 tgcatcacca ggtcagccga gaagcccagg cacgccaggt ctttcagttc atcacgggtc
    16981 atcgggccgg tagtgtcctg tgaacctaca gaagtcattt tcggttcgca gtacgcgccc
    17041 ggacgaatgc ctttcacgcc acaggcacgg cctaccattt tctgcgccag cgagaagccg
    17101 cgatcgctct cagcgacatc tttcgcctga cggaacacat cactgtgcgg cagaccaagt
    17161 gcttcacgcg ctttggtggt caggccacgc ccgataatca gcgggatacg gccgccagca
    17221 cgcacttcat caatcagcac gtcggttttc agttcgaagg tcgccagcag ttcgcctgtt
    17281 tcgtggttac gcacttcacc tttgtacggg taaacgtcaa tcacgtcgcc catgttcagg
    17341 ttagagacgt cgacttcgat tggcagtgca cccgcgtctt ccatcgtgtt aaagaagatg
    17401 ggtgcaattt taccgccgag gcacaaacca ccgccgcgtt tgttcggcac atgtggaata
    17461 tcatcgccca taaaccacag aacggagttc gtggcggatt tacgcgatga acccgtaccc
    17521 acaacgtcac cgacgtacgc cagcgggaaa cctttctgtt gcagagcttc aatctgtttg
    17581 atcgggccaa caacacctgg ctggtctggc tcaatacctt cacgggcgtt tttcagcatc
    17641 gccagcgcgt gcagtgggat atccgggcgc gaccacgcat ccggtgccgg agaaaggtca
    17701 tcggtgttgg tttcgccagt gactttgaag acggtaacgg tcagtttttc agccagcgcc
    17761 gggcgattca gaaaccattc ggcatccgcc caggactgca ttacctgctt cgcatattcg
    17821 ttgcctgctt tcgctttctc ttctacgtca tagaagttat cgaacatcag cagtgtgtga
    17881 gaaagtgctt tggcagcgat cggtgccagt ttggcatcat ccagcgcgtc gatcagcgga
    17941 tgaatgttgt aaccaccctg catggtgccc agcagttcga tggctttttc cggagtcagc
    18001 agaggggatt tggcttcgcc tttcgcgata gcagccagga agcctgcttt gacataggcg
    18061 gcttcatcga cgccaggggg aacacggttg gttaacagat ctaacaggaa ttcttcttcg
    18121 cccgcgggcg ggtttttcag cagctctaca agtgcggcca tttggtttgc atccaggggt
    18181 ttgggcgcaa tcccctcagc ggcacgctca gctacgtgct tacggtattc ttctagcacg
    18241 acggttctcc tcgctctcat tgtcatagtg cggcaggcga ttctcttcac gctcctgtga
    18301 gacagcagtt tgtagggtaa atgcccagta ccgcaacggg cagaatagca ggattttgac
    18361 gacgtgttaa tctgtttaca aaaaagcaac ataaaaaagt ggctgaatcg ttaaggatgg
    18421 tctagagatt gtttccctcc gtaaaaactt cgttaattcg catggtgata atcacctttc
    18481 tcaacgaatc ccaagattag tcaaaattta aactaccgcc tctttatact cggattaaca
    18541 gcacctgcgg gtggcagttc gccgaccatt gcgatttcct tgagatccga attatgaaaa
    18601 tgactttgcc gtttaaaccc catgtgctgg cactaatttg cagtgccggg ctttgtgccg
    18661 cctctgccgg gctatatata aaaagccgca cagtggaagc ggctgtggaa acgcaatcga
    18721 cacaactggc tgtgtctgac gctgccgcgg ttacgcttcc tgcaacggtt tccgcgcctc
    18781 ccgtaacacc cgccgtcgtt aaatccgcat tcagcactgc acaaatagat caatgggtcg
    18841 cgcccgtcgc gctgtatccc gacgccctac tttcgcaggt gctgatggca tcaacctatc
    18901 cggcaaacgt tgctcaagca gtgcaatggt cgcacgataa tccacttaaa caaggcgatg
    18961 ctgctattca ggcggtatct gaccagccgt gggacgccag cgttaaatca ctggtggcct
    19021 ttccacaatt gatggcattg atgggcgaaa acccgcaatg ggtgcaaaac ctgggcgatg
    19081 cttttctggc gcagccgcag gacgtgatgg actcggtaca gcgattgcgg caactggcgc
    19141 aacaaaccgg ttcgctgaag tcatcaaacg aacaaaaagt tattaccaca acgaagaaag
    19201 ctgtaccggt aaaacagaca gtcacggcac ccgtcatacc atccaatacc gttttaactg
    19261 ccagccccgt cattacagag cctgcaacaa ccgtcatttc cattgagccc gccaatcctg
    19321 atgtggtcta tattcccaac tacaacccaa ccgtggttta cgggaactgg gccaatactg
    19381 cgtatccgcc ggtttatctg ccaccaccag ccggagaacc gtttattgac agctttgtgc
    19441 gcggattcgg ctatagcatg ggtgttgcta ccacgtacgc actattcagc agcatcgact
    19501 gggatgacga cgatcatgac catcatcatc atgacgatga tgattatcat caccacgatg
    19561 gcggtcatcg tgacggtaat ggctggcaac acaacggcga caacatcaat atcgacgtca
    19621 acaatttcaa ccgtatcacc ggtgagcatc ttactgataa gaatatggca tggcggcaca
    19681 atccaaacta ccgtaatggt gtgccctatc atgatcagga tatggcaaag cggtttcatc
    19741 aaaccgatgt caacggcgga atgagtgcca cgcagctacc tgctccaaca cgcgacagcc
    19801 agcgtcaggc ggcagcaagt cagtttcagc aacgaacaca cgccgccccc gtcattacac
    19861 gagataccca acgtcaggca gcggcacagc ggtttaatga agctgaacac tatgggagct
    19921 atgacgactt ccgcgacttc agccgtcgcc aacccctgac ccagcaacaa aaggacgccg
    19981 ctcgtcagcg ttatcagtca gcttctcctg agcagcgcca ggcagttcgc gagagaatgc
    20041 agactaaccc gcagatccag cagcgaagag aggcagcgcg tgagcgcatt cagcccgcct
    20101 cgcctgagca gcgccaggca gtccgcgaga aaatgcagac taacccacag atccagcagc
    20161 gaagagacgc agcgcgtgag cgtattcagt cagcctcgcc tgagcagcgc caggtgttta
    20221 aggaaaaagt acagcagcgc ccactgaacc aacagcaacg tgataacgcc cgccagcgtg
    20281 ttcaatcagc atcacctgaa caacgtcagg tttttcggga gagagttcag gagagccgcc
    20341 cacaacgtct aaacgacagt aaccgtactg ccagattgaa taacgatcaa cggtcagcag
    20401 tacgcgaacg tctctctgag cgcggagcaa ggcgactgga aaggtaaatt acagacgtaa
    20461 aaaaagcggc gtggttagcc gcttttttaa ttgccggatg ttccggcaaa cgaaaaatta
    20521 cttcttcttc gctttcgggt tcggcaggtc ggtaatgcta ccttcgaaca cttctgccgc
    20581 caggcccaca gactcgtgca gagtcgggtg cgcatggatg gtcagcgcga tgtcttcagc
    20641 gtcacaaccc atttcgattg ccaggccgat ttcacccagc agctcgccgc cgttggtacc
    20701 gacaatcgca ccaccgatca cacggtgaga ttctttgtcg aaaatcagct tggtcatacc
    20761 gtctgcgcag tcggaagcga tagcacgacc agaagcagcc cacgggaagg tggcggtttc
    20821 atagctgatg cctttctctt tcgcttcttt ctcagtcaga cctacccatg caacttctgg
    20881 ttcggtatag gcgatagacg ggataacttt cggatcgaag tagtgttttt taccggcgat
    20941 aacttcagcg gcaacgtgac cttcgtgaac acctttgtgt gccagcatcg gctgaccaac
    21001 gatatcgccg atagcaaaga tgtgcggtac gttggtacgc agctgtttgt caacgcggat
    21061 gaaaccacgg tcgtccactt ccacgccagc tttgcctgcg tcgaggtttt taccgttcgg
    21121 cacacgacca atcgctacca gcacggcgtc gtaacgctgc ggttcagcgg gtgctttttt
    21181 gccttccatc gtcacataaa taccgtcttc tttcgcttca acggcggtaa ctttggtttc
    21241 cagcatcagg ttgaatttct tgctgatacg cttggtgaag actttaacga tgtctttgtc
    21301 agctgccggg ataacctggt cgaacatttc aaccacgtca atctgtgaac ccagcgcgtg
    21361 gtatacggtg cccatttcca gaccgatgat accgccaccc attaccagca ggcgttctgg
    21421 tacttctttc agttccagcg cgtcagtgga gtcccagata cgcggatctt catgcggaat
    21481 aaacggcagt tggatcgggc gagaacccgc tgcaatgatc gcgttgtcga agttgatcac
    21541 ggttttaccg ttctcacctt caacttccag ggtgttagcc ccggtaaatt tacccagacc
    21601 gttgaccact ttgactttgc ggcctttcgc cataccagcc agaccaccgg tcagctgatt
    21661 gatcactttc tctttccagg tacgaatctt gtcaatatcg gttttcggtt cgccgaagac
    21721 gataccgtgt tcagccagcg ctttggcttc ttcgataact tttgctacgt gcagcagtgc
    21781 tttagaaggg atacagccga cgttcaggca aacaccgcca agggtgttgt aacgttctac
    21841 gattacggtt tccagaccta aatcagcgca acggaaggca gcggagtaac ctgcggggcc
    21901 tgccccaagt accacgacct gagttttgat ttcagtactc atcatgacct ctatatattt
    21961 atctccggcg gtcatacccg tcgtctttca ggccgcagcg gcgttagctt cacgccctca
    22021 ccccagtcac ttacttatgt aagcccctgg ggattctggc gcttgctacc ttgctgcacc
    22081 cagaaatcca tagggtatgt gaagtaatac cctaaccacc accgggtcgt tctatccgtc
    22141 ggtattttac aaaattgtta acaattttta aacaacaaac ggcaaccgat ttgtctattc
    22201 gctaataacc tcaatacatt catgagatta ccagaaaaaa gccggccgtt gggccggctc
    22261 ttttacttac atcaccagac ggcgaatgtc agacagcgtg ttgttaatga tggtaatgaa
    22321 acgggcacca tcagcaccgt cgatcacgcg gtggtcgaag gagagagaaa tcggcagcat
    22381 cagacgcggc acgaactctt taccattcca caccggctcc atcgcggact tggaaacgcc
    22441 gaggatagcc acttccggcg cgttcacaat cggcgcgaag tgggtagtac ccaggccgcc
    22501 gatgctggag atggtgaagc aaccgccctg catttcgccc gcagtcagct taccgtcacg
    22561 cgctttctta gaaatagtca tcagctcgcg agacagctcg atgatgcctt tcttgttgac
    22621 gtctttgaat accggaacaa ccagaccgtt cggggtatcc accgccacac cgatgttgat
    22681 gtatttcttc agggtcagac gctgaccgtc ttccgacagc gaactattga agcgaggcat
    22741 ctgctcaaga gctgcagcaa cggctttcat gatgaagaca accggggtga tcttcacatc
    22801 cagcttacgt ttcgccgctt cttcgttctg ctgtttacgg aacgcttcca gctcggtgat
    22861 atcggttttg tcgaagtggg taacatgcgg gatcatcacc cagttacggc tcaggttagc
    22921 accagaaatt ttctggatac ggcccagttc cacttcttcg atttcaccaa acttgctgaa
    22981 gtccaccttc ggccacggca gcatgcctgg gataccgccg ccagtcgccg ccggagctgc
    23041 ttctgcacgt ttgatagctt ctttcacgta agcctgaacg tcttcgcgca ggatacgacc
    23101 tttacggcca gtgcccttca ctttcgccag gttaacacca aactcgcgtg ccagacggcg
    23161 gatcagcgga gtcgcgtgaa cataagcgtc gttttcagca aattcagatt tgccttccgc
    23221 tttcgcagct ggtgctgctg ccggggcttc agcttttgct gccggtgccg gcgctgccgc
    23281 ttcctgtttc gcaggagctg ccgcaggcgc tgcgccttca acttcgaaga tcataatcag
    23341 cgagccagtt ttcactttat cgccaacgtt gactttcagt tccttcacga cgcctgcaaa
    23401 cggcgccgga acttccatag aagctttgtc gccttctacg gtgatcagtg actgttcagc
    23461 ggcaactttg tcgcccactt tcaccatcac ttcagtcact tcaacttcgt caccgccgat
    23521 atccggaacg ttaacttctt tcacgccagc tgctggtgca ggggccgctg ccggagccgc
    23581 ttcctgttta gccgccggag ctgccgcgcc tgcttcaccc gcgacttcga agaccataat
    23641 cagcgagccg gtagacactt tgtcacccac gttcactttg atctctttca cggtgccagc
    23701 aaacggagcc ggaacttcca tagaagcttt atcgccttct acggtgatca gcgactgttc
    23761 agcttcaact ttatcgccaa ctttcaccag gatttcggtc acttcaactt cgtcgctgcc
    23821 gatatccgga acgttaacgt cttttgccgc cgcagccgcg ggtgctgctg ccggagctgc
    23881 ttctttcttc tcttctgcct gagcaggtgc agcgtctgct gcaccgtcgg cggaatcgaa
    23941 aatcataatc agtgcgccgg tctgggtttt atcgccaaca gagactttga tctctttaac
    24001 gatacccgcc tgcggagacg gaacttccat agaggctttg tcgccttcta cggtgatcag
    24061 cgactgttcg gcttcaactt tgtcgcccac tttgaccagg atctcggtga tttcaacttc
    24121 atcagccccg atgtccggta ctttgatttc gatagccatt attcttttac ctcttacgcc
    24181 agacgcgggt taactttatc tgcatcgatg ttgaatttgg cgattgcgtc agcaaccact
    24241 ttcttatcga tttcgccacg tttagccagt tcgcccagcg ccgcaaccac gacataagaa
    24301 gcatcaactt cgaagtggtg acgcaggttc tcacggctgt cggaacgacc gaagccatca
    24361 gtacccagta cgcggtagtc gtcagccggt acgtaagtac ggacctgctc agcgaacagt
    24421 ttcatatagt cggtagatgc cactgccgga gcgtcgttca tcacctgagc gatatacgga
    24481 acgcgcggag tttccagcgg atgaagcatg ttccagcgtt cacaatcctg accatcacgc
    24541 gccagctcgg tgaaggaggt cacgctataa acgtcagaac ctacgccgta atctttcgcc
    24601 aggatctctg ccgcttcacg gacgtgacgc aggatagaac cggagcccag cagctgaact
    24661 ttacctttgc taccttcaat ggtttcgagt ttgtagatac ctttacggat accttcctca
    24721 gcaccttccg gcattgccgg catgtggtag ttttcgttca gcgtggtgat gtagtagtaa
    24781 acgttctctt gtttttcacc gtacatacgc tccagaccgt catgcataat gacagcaact
    24841 tcgtaagcgt aagccgggtc gtaagagata cagttcggaa tagtcagcga ctgaatgtgg
    24901 ctgtgaccat cttcatgctg cagaccttct ccgttcaggg tggtacgacc ggaagtaccg
    24961 ccgatcagga agccacgcgc ttgctggtcg ccagccgccc agcacagatc gccaatacgc
    25021 tggaagccga acatcgagta atagatgtag aacgggatca tcggcagatt gttggtgctg
    25081 taagaggtcg ccgctgccag ccaggaacaa cctgcgccca gctcgttgat cccttcctgc
    25141 agaatctgac ctttctcatc ttctttatag taagcaacct gctcgcggtc ctgcggggtg
    25201 tactgctgac cgttcgggct gtaaatacca atctgacgga acagaccttc cataccgaaa
    25261 gtacgcgctt cgtcggcgat gatcggtacc agacgatctt tgatcgactt gttcttcagc
    25321 attacgttca gggcacgaac gaaagcgata gtggtagaga tctctttgct ctgctcttcc
    25381 agcagcgcgc cgaagtcttg caggctcggc agctcaagct tctcggtgaa gttcggctga
    25441 cggcttggca gataaccgtg cagtttctga cgctgtgcgt gcagataggt atgctcttca
    25501 gaaccttccg ggaaggtgat gtacggcagt ttttcgatat ctgcatcaga caccggcaca
    25561 ttgaaacggt cgcggatgtg acgcacgccg tccatgttca ttttcttaac ctggtgcgcg
    25621 atgtttttac cttcagccgc gtcgcccatg ccgtaacctt taatggaatg agcaaggatt
    25681 actgtcgctt tgcctttggt ttcctgcgct ttcttgaatg cagcgtagat tttcttcgga
    25741 tcgtgaccac cacggttcag tgcccagatc tgctcgtcag tccagtctgc aaccagtgct
    25801 gcggtttcag gatatttacc gaagaagtgt tcacgaacgt acgcaccatc tttcgatttg
    25861 aaggtctggt agtcgccgtc aacggtttcg ttcatcagct ggatcagttt accgctggta
    25921 tctttacgca gcagttcatc ccaacggcta ccccacatca ctttgatcac gttccagcca
    25981 gcaccttcga agatgccttc cagttcgttg atgatcttgc cgttaccggt gaccgggccg
    26041 tcaagacgct gcaggttaca gttgataacg aagaccaggt tatccagttt ttcacgggta
    26101 gcgatggtga tcgcaccttt ggattccggt tcgtccattt caccgtcgcc gaggaacgcg
    26161 taaacggtct gtttagaggt atctttcagg ccacggtgtt ccagatattt caggaattta
    26221 gcctggtaaa tagcaccaat cggccccagc cccatagata cggtcgggaa ctgccagaat
    26281 tccggcatca gtttcgggtg cggataggaa gagaggccat tgccgtgaac ttcctgacgg
    26341 aagttatcca gctgctcctg agtcagacga ccttccagga aagcacgagc gtacacgccc
    26401 ggggagatgt ggccctggaa gtaaaccagg tcgccgccat cctgctcgtt gcgtgcacgg
    26461 aagaagtggt taaagcacac atcataaatg gttgcggaag actggaagga cgccatatgg
    26521 ccgcccagtt cgaggtcttt tttcgacgca cgcagcaccg tcatgatggc gttccagcgg
    26581 atagctgaac gaatacggcg ttccagttcc agattacccg gatactccgg ttgttcttca
    26641 acggggatgg tgttgatgta gttgctgata cctgtgcctg cggctacgtt tacaccgcct
    26701 ttgcgggctt cagcaagcag ttggtcgatc agatactgag cacgctcaac accttcttca
    26761 cggatgaccg attcgatcgc ctggagccag tcgcgagttt cgatcggatc cacgtcattt
    26821 gggaaacgtt ctgacatggg ttattcctta tctatctaat aacgttgagt tttctggaac
    26881 ctgtcccatt gaactctcgc cggaaagctc aataagacag gttctacgtt tagttgccgc
    26941 gcttttatat gcgcttgatt tacaacatct tctggataat ttttaccagt aaaatcacta
    27001 attctttcgt tgctccagac gacgcagaga acgctcacgg cggctctctt cacgacttct
    27061 gtcgagcaaa atttcttcga taaaggccag atggcgatgc gatgcttcgc gcgcttcttc
    27121 cggcttaccg gccataatcg cttcaaatat gcgggtgcgg tgactactca ccagcggcag
    27181 catctcgcga cgcgaataga gcaattcgaa gttctggcgg acattctggg ccaacatcgg
    27241 ctccatacac cttagcagat gaagcagaac cacattgtgg gccgcttcag tgacagcaat
    27301 ctgatactgg agtacggcgt ttgattccgc gtccagatcg ccagactgct gcgccagttc
    27361 tatggcgtga tggagttcac ggatgcgttc cttgtcttca tcggtactac gcagcgcggc
    27421 gtaataagcg gcgatacctt ccagggcgtg tcgtgtttcg agcaagtcat actgtgactc
    27481 aggatggtcg gagagcagct ccaccagcgg atcgctgaag ctttgccata ggctgctctg
    27541 gacaaaagtg ccgccaccct ggcgacgaag caacaagccc ttcgcttcga gacgttgaat
    27601 cgcctcacgc aaggagggac gggagacgtc aaactgtttt gccagttcgc gttccggtgg
    27661 gagtttttcg cccgggcgga gagtgccttc gaggatcaaa aactccagtt gctgctcaat
    27721 cacatcggag agttttggtt ggcggatttt gctgtaggcc atgagttcct gtcttaagcc
    27781 acttgccgaa gtcaattggt cttaccaatt tcatgtctgt gacgctaaag taacaaagta
    27841 ttcaccttat gtccatacag gttttgattg aaatcatgaa actgtgcaca ttttaacaac
    27901 ttgacatata taacgtttca aagttgtaac tatgcacaaa tgtagacttt acgtaggaaa
    27961 gggatttttt aacgattatt aaactataaa aatccgaatt gaaccgattc acttaccaat
    28021 tttgtgattt ttaattcaat taaaacgaat ttaaattcat tctacatatt gagaggggtt
    28081 gaggctgagc tttacaaacg gtttcttttt aagcaactca tcttcaacca tgcataaagc
    28141 gggtgcattc gctgccgcat accattattc ttgatctgac ggaagtcttt ttgtaacaat
    28201 tcaaacttct ttgatgtaaa caaattaata caacaaacgg aattgcaaac ttacacacgc
    28261 atcactgcgt agatcaaaaa aacaaccacc gcacgaggtt tcatgatgga aggtcaacag
    28321 cacggcgagc agctaaaacg cggccttaaa aaccgccata ttcagcttat cgcgctgggt
    28381 ggcgcgatag ggaccgggtt attcctgggt agcgcctccg taatacagtc cgcagggcca
    28441 gggattatcc tgggttacgc cattgctggt tttatcgcct ttctgatcat gcgtcagctg
    28501 ggtgaaatgg tggtcgaaga acctgtcgca ggctccttta gccactttgc ttataaatac
    28561 tggggcagtt ttgccggttt cgcctctggc tggaactact gggtactgta cgttttagtt
    28621 gccatggctg agctgactgc cgtgggtaaa tacattcagt tctggtatcc ggaaatcccc
    28681 acctgggttt ctgccgccgt attctttgtg gtgattaacg ccatcaacct gaccaacgtt
    28741 aaagtgtttg gcgagatgga gttctggttt gccattatca aagttatcgc tgtggtagcg
    28801 atgatcatct tcggcggctg gctgctattc agtggcaaca gcggcccgca ggcgaccgtt
    28861 agcaacctgt gggatcaggg tggtttcctg ccgcacggct tcaccgggct ggtgatgatg
    28921 atggcgatta tcatgttctc gttcggtggt ctggaactgg tggggatcac cgcagcagaa
    28981 gctgataacc cggagcaaag tataccgaaa gcaactaacc aggttatcta ccgcatcctg
    29041 attttctata ttggttcgtt agccgttctg ctctcactga tgccgtggac ccgcgttacc
    29101 gccgatacca gtccgtttgt gctgatcttc cacgagttag gcgatacctt tgtggcgaat
    29161 gcgctgaaca tcgtggtact gactgcggcg ctctccgtgt acaacagctg cgtatattgc
    29221 aacagccgta tgctgtttgg tctggcacaa cagggtaatg cgccaaaagc gctggcgtct
    29281 gtcgataaac gtggtgtacc agtaaatacc attctggtgt ctgcactggt aacggcgttg
    29341 tgcgtactga ttaactacct tgccccagag tccgctttcg gactgttaat ggcgctggtg
    29401 gtatctgcac tggtaatcaa ctgggcgatg attagcctgg cgcatatgaa attccgtcgc
    29461 gccaagcagg aacaaggcgt ggtaactcgc ttccctgctc tgctttatcc gctgggtaac
    29521 tggatctgcc tgctgtttat ggcggcggta ctggtgatta tgctgatgac cccaggaatg
    29581 gcgatttcgg tatacctgat cccggtatgg ctgatcgtgt taggtatcgg ctatctgttt
    29641 aaagagaaaa ccgccaaagc cgtaaaagcg cattaatctc tctacgccct cacccgtaca
    29701 gggtgagggc aataatcttt acaccaacgc cccgtaaatc gtcagtagtg caatcaccac
    29761 cacgaccacg aacgaggttt tcttcgccat tgaaaccgct gccttcggcg tctccacctt
    29821 atcgacatgc ggttcacgcg ccagagagaa ctgcgccaga cgcgttaaca cctgatactg
    29881 cgaagtatgg aagtcaccca gcgaagcaaa ccaggccggt aacgctttct ccccatgacc
    29941 gatcaaggca tataccacac ccgcaagacg aaccggcacc caatccagta catgaagcac
    30001 ggcatcaatg ccggactgta aacgatgatg cggcgtctgg tatcgcgcca gccagtattg
    30061 ccatgcacgc aaaaacgcat accccatcag cgtaacgggt ccccagattc cccccacaat
    30121 caaccagaac agcggagcaa gataaaaacg aaagttaatc cacagcaatg cattttgcag
    30181 ctcacgcaaa tactcacgtt catcgcagcc tgccgggacg ccgtgaatca tggtgagttc
    30241 gccagccatc gtgacacggg catggctatc attacgtgaa gcagctgtca gataagcatg
    30301 ataatgaaga cgaactttac ctgcgccaat acacagcaaa ccaatcagca gccacaccag
    30361 cagcgtggga acgttgaaca atactccctg caatgcgcgt aacagtaaaa aagtcacgcc
    30421 catcgcaata atggtcatgc ctaacgtgcg cccgagagaa aaatgtttca cccgccgaaa
    30481 gaacgcttca agacgatgat caagctgcca gtgctcgccc aacttaaaca ggcgctcgaa
    30541 aattaacacc agtaaggttg taaatagcgt catgttgtct ccttgctgac cagcgcacga
    30601 aaccgcgccc aatcaaatgc agggccggga tcggttttcc gatccggcgc aatatcacaa
    30661 tggcccgtca tgttattagc gatatctgga tagcgatcaa tcagtgcccg cgtaaccgcc
    30721 gcaagctgtt gatactgcgc atcggtatac gccagcgtat cggtgccttc aagctcaatc
    30781 ccaatagaaa aatcattgca gcgttcgcgc ccctgatact gagagactcc cgcatgccat
    30841 gcacgtttat cgaaaggaac atactggact atttcaccat cacggcgaat caaacagtga
    30901 gcggagacgc gcaaatgggc gatctcagca aagaaaggat gtgcctgcgg atcaatagtt
    30961 ccagtgaata atgcgtcgat ccacggaccg ccaaactcgc ctggcggcag gctaatattg
    31021 tgcaccacca gcagggtggg tgtttcgtca tccgggcggc aatcgtaatg tggtgaggga
    31081 acgcggcgcg cgccaaccag ccacccctgt tctaacaaca tgcaggatct ccttatatgt
    31141 ggtgctaata cccggttcag agtagcatgt ttctacctta tgattcgtta gctatctgga
    31201 gttttaacat gccgcctcgc cgctataacc ctgacacccg acgtgacgag ctgctggaac
    31261 gcattaatct cgatatcccc ggcgcggtgg cccaggcgct gcgggaagat ttaggcggaa
    31321 cagtcgatgc caacaatgac attacggcaa aacttttacc ggaaaactct cgctctcatg
    31381 ccacggtgat cacccgcgag aatggcgtat tttgcggcaa acgctgggtt gaagaggtgt
    31441 ttattcaact ggcaggcgac gatgtcacca taatctggca tgtggatgac ggcgatgtca
    31501 tcaacgccaa tcaacccttg ttcgaacttg aaggcccatc ccgcgtgctg ttaacgggcg
    31561 aacgcactgc gcttaatttt gtgcaaaccc tttcaggagt tgccagtaag gtacgccact
    31621 atgtcgaatt actggaaggc accaacacgc agttgttgga tacgcgcaaa accttacctg
    31681 gcctgcgttc agctctgaaa tacgcggtac tttgcggcgg cggagcgaat caccgtctgg
    31741 ggctttctga tgccttcctg atcaaagaaa atcatattat tgcctccggc tcagtgcgcc
    31801 aggccgtcga aaaagcgtcc tggctgcacc cggatgcgcc agtagaagtc gaagtagaga
    31861 atctggaaga acttgatgaa gccctgaaag caggagccga tatcatcatg ctggataact
    31921 tcgaaacaga acagatgcgc gaagccgtca aacgcaccaa cggcaaggcg ctactggaag
    31981 tgtctggcaa cgtcactgac aaaacactgc gcgaatttgc cgaaacgggc gtggacttta
    32041 tctccgtcgg tgcgctaact aaacacgtac aagcactcga cctttcaatg cgttttcgct
    32101 aattgctgac agatttatcc gctccatcgc gggcggataa tctccccttc cccaactttc
    32161 ttcgtaacgc ctcgcaaatt tcttgtcttt cgctgcaacg aaataaaaaa cctcggaagc
    32221 tgctttcccg tttcgttttt tgcccctcgc ttgtgctgat ggcgtttgcc aaagtagcgc
    32281 caaccaaatc aaggagcgaa acagatggac aag
//
LOCUS       DAJVUK010000029        31371 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.029, whole genome shotgun sequence.
ACCESSION   DAJVUK010000029 DAJVUK010000000
VERSION     DAJVUK010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 31371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31371
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.029"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(15..3296)
                     /locus_tag="OQQ57_001281"
     CDS             complement(15..3296)
                     /locus_tag="OQQ57_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5107 domain-containing protein"
                     /protein_id="HCS1956111.1"
                     /translation="MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYG
                     VTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPA
                     LVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMT
                     GFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKR
                     AVSAFPIATGTYYKVDYSAGVDISCYKNVPVTTSYMAEKSQYDFVGAWCHDEDGGLLH
                     VANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEE
                     KRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCN
                     ALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQELPLLDVAKA
                     PLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNR
                     ADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGN
                     SKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARV
                     QREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTL
                     AAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESI
                     EECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELA
                     ARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLN
                     LWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDAREPQQASELL
                     HAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRLAATGDRTINIHS
                     YYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLL
                     SLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFI
                     FNYVH"
     gene            3414..4607
                     /locus_tag="OQQ57_001282"
     CDS             3414..4607
                     /locus_tag="OQQ57_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HCS1956112.1"
                     /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
                     SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
                     SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
                     MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
                     SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK
                     SQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
                     YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
                     QLRQI"
     gene            complement(4671..5924)
                     /gene="glyA"
                     /locus_tag="OQQ57_001283"
     CDS             complement(4671..5924)
                     /gene="glyA"
                     /locus_tag="OQQ57_001283"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HCS1956113.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            6252..7442
                     /gene="hmpA"
                     /locus_tag="OQQ57_001284"
     CDS             6252..7442
                     /gene="hmpA"
                     /locus_tag="OQQ57_001284"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HCS1956114.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISSGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIYYECFGP
                     HKVL"
     gene            complement(7487..7825)
                     /gene="glnB"
                     /locus_tag="OQQ57_001285"
     CDS             complement(7487..7825)
                     /gene="glnB"
                     /locus_tag="OQQ57_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HCS1956115.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(7886..9220)
                     /gene="glrR"
                     /locus_tag="OQQ57_001286"
     CDS             complement(7886..9220)
                     /gene="glrR"
                     /locus_tag="OQQ57_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HCS1956116.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(9210..9923)
                     /gene="qseG"
                     /locus_tag="OQQ57_001287"
     CDS             complement(9210..9923)
                     /gene="qseG"
                     /locus_tag="OQQ57_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HCS1956117.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGCWQ
                     NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHESEKPAPSTHEVTPDEP"
     gene            complement(10088..11515)
                     /gene="qseE"
                     /locus_tag="OQQ57_001288"
     CDS             complement(10088..11515)
                     /gene="qseE"
                     /locus_tag="OQQ57_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HCS1956118.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSS
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGVVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(12073..15960)
                     /gene="purL"
                     /locus_tag="OQQ57_001289"
                     /gene_synonym="purI"
     CDS             complement(12073..15960)
                     /gene="purL"
                     /locus_tag="OQQ57_001289"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HCS1956119.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRILGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRILHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            16220..17776
                     /gene="mltF"
                     /locus_tag="OQQ57_001290"
     CDS             16220..17776
                     /gene="mltF"
                     /locus_tag="OQQ57_001290"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HCS1956120.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLCNLTAEQLTVAPGHVV
                     VNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(17773..18309)
                     /gene="tadA"
                     /locus_tag="OQQ57_001291"
     CDS             complement(17773..18309)
                     /gene="tadA"
                     /locus_tag="OQQ57_001291"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HCS1956121.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(18334..18969)
                     /gene="yfhb"
                     /locus_tag="OQQ57_001292"
     CDS             complement(18334..18969)
                     /gene="yfhb"
                     /locus_tag="OQQ57_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HCS1956122.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDKPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            19178..20026
                     /locus_tag="OQQ57_001293"
     CDS             19178..20026
                     /locus_tag="OQQ57_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCS1956123.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            20082..20342
                     /gene="yfhL"
                     /locus_tag="OQQ57_001294"
     CDS             20082..20342
                     /gene="yfhL"
                     /locus_tag="OQQ57_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HCS1956124.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
     gene            complement(20536..20616)
                     /gene="shoB"
                     /locus_tag="OQQ57_001295"
     CDS             complement(20536..20616)
                     /gene="shoB"
                     /locus_tag="OQQ57_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HCS1956125.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
     gene            complement(21036..21416)
                     /locus_tag="OQQ57_001296"
     CDS             complement(21036..21416)
                     /locus_tag="OQQ57_001296"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HCS1956126.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            complement(21416..22147)
                     /gene="pdxJ"
                     /locus_tag="OQQ57_001297"
     CDS             complement(21416..22147)
                     /gene="pdxJ"
                     /locus_tag="OQQ57_001297"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HCS1956127.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQREKMRDACKRLTDAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            complement(22159..22887)
                     /gene="recO"
                     /locus_tag="OQQ57_001298"
     CDS             complement(22159..22887)
                     /gene="recO"
                     /locus_tag="OQQ57_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HCS1956128.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            complement(22899..23804)
                     /gene="era"
                     /locus_tag="OQQ57_001299"
     CDS             complement(22899..23804)
                     /gene="era"
                     /locus_tag="OQQ57_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HCS1956129.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(23801..24481)
                     /gene="rnc"
                     /locus_tag="OQQ57_001300"
     CDS             complement(23801..24481)
                     /gene="rnc"
                     /locus_tag="OQQ57_001300"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004248457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HCS1956130.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(24754..25728)
                     /gene="lepB"
                     /locus_tag="OQQ57_001301"
     CDS             complement(24754..25728)
                     /gene="lepB"
                     /locus_tag="OQQ57_001301"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HCS1956131.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(25744..27543)
                     /gene="lepA"
                     /locus_tag="OQQ57_001302"
     CDS             complement(25744..27543)
                     /gene="lepA"
                     /locus_tag="OQQ57_001302"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HCS1956132.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(27741..28220)
                     /gene="rseC"
                     /locus_tag="OQQ57_001303"
     CDS             complement(27741..28220)
                     /gene="rseC"
                     /locus_tag="OQQ57_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HCS1956133.1"
                     /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            complement(28217..29173)
                     /gene="rseB"
                     /locus_tag="OQQ57_001304"
     CDS             complement(28217..29173)
                     /gene="rseB"
                     /locus_tag="OQQ57_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HCS1956134.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGDEISYFEPGLEPFTL
                     NGDYIVDSLPSLVYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            complement(29173..29823)
                     /gene="rseA"
                     /locus_tag="OQQ57_001305"
     CDS             complement(29173..29823)
                     /gene="rseA"
                     /locus_tag="OQQ57_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HCS1956135.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(29856..30431)
                     /gene="rpoE"
                     /locus_tag="OQQ57_001306"
     CDS             complement(29856..30431)
                     /gene="rpoE"
                     /locus_tag="OQQ57_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HCS1956136.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(30428..30583)
                     /gene="rseD"
                     /locus_tag="OQQ57_001307"
     CDS             complement(30428..30583)
                     /gene="rseD"
                     /locus_tag="OQQ57_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HCS1956137.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            30839..>31371
                     /locus_tag="OQQ57_001308"
     CDS             30839..>31371
                     /locus_tag="OQQ57_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCS1956138.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHVQPNGEESYHLTREGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERS
                     NAVDLIVSDKIGLPGTRR"
BASE COUNT         7501 a         8405 c         7919 g         7546 t
ORIGIN      
        1 acagttaata gggtttagtg aacgtagtta aaaataaaag gcatcacagt ggtgaataat
       61 gccgctttcg gccaggccgg attaatcgcc gtcaattcag cgcgagcaga ctcatattgc
      121 gcaacctccc cgagtcccgc ggacgccagc atcgccacca tcaggcattt ttctttatgc
      181 tgctgttgta aatcgccata cagcgataac aggtcaggtt gtgaaacagc aaagaaatcc
      241 gcctcaatac tggttttcgc catctcttgc gcccactgtt tcatttcact aaacagttgc
      301 tgtgcggttt gctgttcacc cagcagtcgc agcgccattc cttgccagaa gagataatca
      361 accggctgat cgttgtaata actgtggatg ttaatggtgc gatcgccggt cgccgccaga
      421 cgtaaacaac gcatcgcttc agtttcatcg ccctgcgcgt tggcgcatat cgcctgccag
      481 aaccagatgt cgttatcagt ttgccccggt aaacggcctt cgcttaaatt ctccggataa
      541 tgcagcgcgg catgaagcag ttcgctggcc tgctgcggct ctctggcatc aagatgctgc
      601 caggcgcgta ataactggtt gaggataaac tgactggtga ccttcccttc cccgccttcc
      661 cacgggtgga atttacgcgt ggcgagaatg tccgccgctt tgtctgcctg acccgtgaga
      721 tgccacaaat tgagcagttc tgcggtcatg tcgtcgcgtt tcagcgcaat ttccagatta
      781 ttttccagac gcgccagtcg tttctccggt gtggctccac ttaacttatc aagcaaatcc
      841 cgttcgaaaa gcagacgtgc atcctgcggc gcaagctgat aagcattatc aagataacgc
      901 gcggccagct cataatcgtg ttgcttattc cacgcatgga tcgctaaccc gcgccagccg
      961 tcggcaaact ccggcgacat ctctacgcaa cgttgccaaa aggcaatggc tttgttgtag
     1021 ctacgtttgt tgtagtagaa gcaggccagt aaatggcgag caaaccagca ctcttcaata
     1081 ctctccagcg ccgccacttc ttccagcgta ttcgggaaac ggacaaactg cgggaagaca
     1141 tcaatggctt ttgcgaccag ttcgccacgt tcggctttcg gcagcaagct ggcttgcagg
     1201 taaagcggca gcgtgcgctg gcagtccagt gcgttcagca tctctgccgc cagggtgggc
     1261 attccccagt taatcagttg cccggcggtc atcagggcgt taacgtcgcg tccctgacac
     1321 agaccgcgcc actgcgcgag agctgattcg ctacgaccat cgaaccagtt cagccaccac
     1381 agagtggcgt tcagcggata atcgcgcagc agtttctcgc gctgcacacg cgcgttgtcc
     1441 tgacgaccac ttaacaccag cagcagatta tgcaggcaaa gcacttcctg attggttggg
     1501 caggcgcgaa gactttgttg gcaaaaatcc agaccagcgt cgaagttacc attacgcgcc
     1561 gccagtcgtg ccaggccata atagccaccg gctttgctgt tgccgctcca gaccgcacgc
     1621 cagaaatcct cttcggcttg ttgatattgt ccctgacgtt cgtaagcact ggcgcgaatc
     1681 aaactcgcct gtccgcactg cggatttttg ttcagcgcat gtgcgcgttt cagagcctga
     1741 gtggcatacg ccaccgcttg cgggaaatcg gcgcggttat attccagcat cgccagcgcc
     1801 aggttacagc ggtaatccag cggatccagc gccacgccgc gcaggtagta atcgaacggt
     1861 gaacggctgg cgtgatgata ttgctccaga tgctgaccga taaaccaggc ttcatctgta
     1921 ctggtaatgt cttgtgctgc cagtggcgct ttggcgacgt ccagcaacgg caactcttgc
     1981 ggctgatgtt cctgataact cagtacaata ttgccgtcgg catcggagag ctcaatggtc
     2041 agcctttcag gattgatacc gtgcaacacg ccctggatgg cggtcgcagg catcagtgcc
     2101 acggcatcat caagtaacgc gttgcatttg ccgatttcgc ggatcgccag gcggtatccg
     2161 ttcaacggag agatggcata cagcccccac tcaatccccc gcttactacg ctggagtttt
     2221 atcaccgcat cgcgggaggc attttgcacc atgcccaaag aatgataagg caggaaatac
     2281 tgctcaaaac gcttctcttc gtaagcatca agccaggtaa aatcgggctg gttatcggca
     2341 aaaataccgg tcatcagttc gatatacggg ccgttattgt cggtcagact cttatcccac
     2401 gcctggccaa attcactgtg tccccaactc cactgttttt tacctggcgc aatatggtgg
     2461 ttggcaacgt gcagcaaacc gccatcttca tcgtgacacc acgcgccgac aaaatcgtac
     2521 tgcgattttt cggccatata tgaggttgta acaggcacat ttttatagca agaaatgtcc
     2581 actccggcgg agtagtccac tttgtagtaa gtgccggtgg cgatggggaa agcggagacg
     2641 gcccgtttgc cgtgatcaaa caccgcagtc acatccggtg ggaaaacgct ctgatgccct
     2701 tccccccctt tcactgccgg gttggcccac cacaagaaat gacgcggcgt ggcgttaccg
     2761 ttatagacgc ggctggcgat ttccagcgcc gcccggtcag ggcgcagggt gaaacctgtc
     2821 atcacctgta aaccatgcat cggctccgtt tcgcctaccc acaccgtctg tgcaccgtct
     2881 tcatgggctt cgagggtgaa atcaacgggc ataaaggtgg tcgggcgatg atgttgcggc
     2941 cagttaaact caatcccacc ggaaatccac ggccccagca gccccaccag cgcaggttta
     3001 atgacttcat tgtgataaac aaaatcgcgc tgtttcactt tatcccacgc gcgatgcacc
     3061 cgaccgccca gttccggcag gatcatcact ttgatgtagt cgttttccag ccacaccgcc
     3121 tgccaggatt tcagggtttt ctgctcgctc agcgtatcgg tcacgccgta gggataaacc
     3181 gcgccggacg atccctgata aacgcgattt tccaggaaca tgggatgtat atcctgcggc
     3241 ccggtttcat aggtcgggat ctcaacgcgc tcttgccaca cttttactgg agtcatggtg
     3301 ccctcaatat taacaagaca tactgaatta aaagatttgt ggcagtgtat tgaacaatct
     3361 ggcaatgttt tcgcggaata atcacgcaat taactaaaca aggtttagtg aagatgagag
     3421 cctgcattaa caatcaacag attcgccacc ataacaaatg cgtgattctg gaactgctgt
     3481 accggcaaaa gcgcgccaat aaatcaacgc tggcccggct ggcgcaaatt tcgattccgg
     3541 cagtcagtaa tattttgcag gaactggaaa gcgaaaaacg ggtggtgaat attgacgatg
     3601 aaagccagac gcgcgggcat agtagcggta catggctgat tgcgccggaa ggtgactgga
     3661 cgctgtgcct gaacgtgacg cccaccagta ttgagtgtca ggttgctaat gcttgtttaa
     3721 gtccgaaagg tgaatttgag tatttacaga ttgatgcacc gacgccgcag gcgctgctgt
     3781 ccgaaatcga aaaatgctgg catcgccacc gtaaattgtg gccggaccgc accatcaatc
     3841 tggcgctggc aatccacggt caggttgatc cggtgaccgg cgtgtcgcaa accatgccgc
     3901 aagcgccgtg gacaacgccg gttgaggtga agtatctgct ggaagagaag ctgggcattc
     3961 gggtgatggt cgataatgac tgcgtgatgc tggcgctggc ggagaaatgg caaaataatt
     4021 cgcaggaacg ggatttctgc gtgatcaacg ttgattacgg cattggctcg tcgttcgtga
     4081 ttaacgagca aatttatcgc ggcagtttgt atggtagcgg acaaattggt cacaccatcg
     4141 ttaatccgga tggcgtcgtc tgcgactgtg gacgttacgg ctgcctggaa accgtcgcct
     4201 cgttaagtgc attaaaaaaa caggcgcggg tatggctaaa atcacaaccg gttaatactc
     4261 agcttgatcc tgaaaaactg acaaccgcgc agttaatcgc tgcctggcag agtggagaac
     4321 cgtggatcac cagctgggtt gatcgctctg ccaatgccat tggtttgagt ctgtataact
     4381 tcctcaacat cctcaatatt aatcagattt ggttgtacgg tcgcagttgt gcctttggtg
     4441 agaactggct taatactatt attcgccaga caggatttaa cccgttcgac cgcgacgaag
     4501 gaccgagcgt gaaagcgacg caaattggct tcgggcaatt aagccgcgca caacaggtgc
     4561 tgggaattgg ctatttgtat gttgaggcgc agttacgaca gatttgatgg cgcgataacg
     4621 tagaaaggct tcccgaagga agcctttttt caacagatta accgtttcgc ttatgcgtaa
     4681 accgggtaac gtgcgcagat gtcgagaact ttacctttga tgcgctcgat aacggcttca
     4741 tcattgatgc tgtccagcac gtcacacatc cagccagcca gttctttcgc ttctgcttct
     4801 ttgaagccgc gacgcgtaat tgccggagta cccacgcgaa taccggaggt cacaaacggg
     4861 ctcttcggat cgttcggtac gctgtttttg ttgacggtga tgttagcacg gcccagagcg
     4921 gcgtctgctt ctttaccggt caggttttta tcaaccagat caaccaggaa caggtggtta
     4981 tcagtgccgc cggaaaccac tttgtagccg cgctcgagga acacttctac catcgcttta
     5041 gcgtttttcg cgacctgctg ctggtaagtt ttgaactcag gctccatcgc ttctttcaga
     5101 gcaaccgctt taccggcgat tacgtgcatc aacggaccgc cctgaccacc agggaaaacg
     5161 gcagagttca gttttttgta cagctcttcg ctaccacctt tcgccaggat caggccgccg
     5221 cgcggacccg ccagggtttt gtgagtggtg gtagtaacaa cgtgagcatg aggaaccggg
     5281 ttcgggtaga cgccagcagc aaccaggccc gcaacgtgcg ccatatcaac gaacaggtaa
     5341 gcaccgatgc tgtcagcgat ttcacgcatt ttcgcccagt ccaccacgcc ggaatatgca
     5401 gagaaaccac cgataatcat tttcggcttg tgttctttgg cttgtttttc cagatcggcg
     5461 tagtcgatat gaccggtagc atcgataccg taaggaacga tgttgtacag tttaccggag
     5521 aagttaaccg gagaaccgtg agtcaggtga ccgccatgcg ccaggttcat acccagaacg
     5581 gtatcacctg gttccagcag cgcggtgtag accgcaaagt tagcctggga gccggagtgc
     5641 ggctggacgt tagcgtagtc agcgccgaac agttctttcg cacgatcgat cgccagttgt
     5701 tcaacgatat caacatactc gcaaccgccg tagtagcgtt tgcccggata accttcagca
     5761 tatttgttgg tcagctgaga accctgcgcc tgcattacgc gcgggctggt gtagttttcg
     5821 gaggcgatca gttcgatgtg ctcttcctga cgtacttttt cctgctccat agcctgccac
     5881 agttcggcat cataatcggc aatgttcatt tcacgcttta acatccgcat ctcctgactc
     5941 agctaacaat aaaatttttg gcctttatag gcggtcctgt tggacaacgg cgaacagtat
     6001 aaccgaatca ttgtgcgata acaggtcttg acaaaggaat ttacgcaaac gattaccttc
     6061 aggctacgca aggctttgga gaataaagag cttgcaaccg gaaacggatt tcttttcagg
     6121 tttgtgatgc aaatttttca cttcatcaca ttctttctga aaaacaccaa agaaccattt
     6181 acattgcagg gctatttttt ataagatgca tttgaaatac atcaattaag atgcaaaaaa
     6241 aggaagacca tatgcttgac gctcaaacca tcgctacagt aaaagccacc atccctttac
     6301 tggtggaaac ggggccaaag ttaaccgccc atttctacga ccgtatgttt actcataacc
     6361 cagaactcaa agaaattttt aacatgagta accagcgtaa tggcgatcaa cgtgaagccc
     6421 tgtttaacgc tattgccgcc tacgccagta atattgaaaa cctgcctgcg ctgctgccag
     6481 cggtagaaaa aatcgcgcag aagcacacca gcttccagat caaaccggaa cagtacaaca
     6541 tcgtcggtga acacctgttg gcaacgctgg acgaaatgtt cagcccgggg caggaagtgc
     6601 tggacgcgtg gggtaaagcc tatggtgtac tggctaatgt atttatcaat cgcgaggcgg
     6661 aaatctataa cgaaaacgcc agcaaagccg gtggttggga aggtactcgc gatttccgca
     6721 ttgtggctaa aacaccgcgc agcgcgctta tcaccagctt cgaactggag ccggtcgacg
     6781 gtggcgcagt ggcagaatac cgtccggggc aatatctcgg cgtctggctg aagccggaag
     6841 gtttcccgca tcaggaaatt cgtcagtact ctttgactcg caaaccggat ggcaaaggct
     6901 atcgtattgc ggtgaaacgc gaagagggtg ggcaggtatc caactggttg cacaatcacg
     6961 ccaatgttgg cgatgtcgtg aaactggtcg ctccggcagg tgatttcttt atggctgtcg
     7021 cagatgacac accagtgacg ttaatctctt ccggtgttgg tcaaacgcca atgctggcaa
     7081 tgctcgacac gctggcaaaa gcaggccaca cagcacaagt gaactggttc catgcggcag
     7141 aaaatggcga tgttcacgcc tttgccgatg aagttaagga actggggcag tcactgccgc
     7201 gctttaccgc gcacacctgg tatcgtcagc cgagcgaagc cgatcgcgct aaaggtcagt
     7261 ttgatagcga aggtctgatg gatttgagca aactggaagg tgcgttcagc gatccgacaa
     7321 tgcagttcta tctctgcggc ccggttggct tcatgcagtt taccgcgaaa cagttagtgg
     7381 atctgggcgt gaagcaggaa aacatttatt acgaatgctt tggcccgcat aaggtgctgt
     7441 aatttgatgt tgccggatgg aaacatccgg caacccttga cgcggtttaa attgccgcgt
     7501 cgtcctcttc accggtacgg atgcgaatga cccgtgccac gtcaaagacg aagattttac
     7561 cgtcaccgat tttgccggtt tgcgccgtgc gaataatggt atcgacacag gtatcgacaa
     7621 tgtcgtccgg tacgacaatc tcaattttca ctttcggcag aaaatccacc atatactccg
     7681 cgccgcggta cagctcggta tggcctttct ggcgaccaaa gcctttcact tcggtcaccg
     7741 tcatgccggt aataccgact tcggccagtg cttcgcggac atcgtccagc ttgaagggtt
     7801 ttataatcgc atcaatcttt ttcatgctat tccttgaaaa ggtcgcctgt cttttgatct
     7861 gctaaacgta acacataacg ccaattcatt ccttgaaatc gtttgcatcc agctcgtgtc
     7921 gggaaagcag tttataaaat tctgtccggt tgcgccccgc cattctcgcc gcgtgggtga
     7981 cgttgccttt ggtaatttgc agcagcttac gcaaatagtt gagttcaaac tgattacgtg
     8041 cctcaacaaa ggttggcagc gccgtgtttt caccctccag cgcctgctct actaatgcat
     8101 cgctaataac cggagatgag gtcagcgcca cgcactgttc aatcacgttg accaactggc
     8161 gcacattacc cggccagcta gcggtcatca ggcgtttcat cgcatcagtg gagaacgcgc
     8221 ggacaaacgg tttatgtcgc tctgccgcct ggcgcaacag gtgatttgcc agaagcggaa
     8281 tgtcttctgt gcgctctgcc agagccggaa ttttcaggct gacaacgttg aggcggtaat
     8341 agagatcttc gcggaattcc ccgcgcgcca tcgcttttgg cagatcacgg tgagtggcag
     8401 aaataatccg cacattgata tcaatatcgc ggttactgcc cagcgggcgc actttacgct
     8461 cctgcaacac gcgcagcagt ttgacctgta acggcgcagg catatcgcca atttcatcga
     8521 gaaatagcgt tccgccttcc gccgcctgga ataaaccttc gcgattgctg acagcgccag
     8581 taaacgcgcc acgcgcatga ccaaacagct ccgactccag caattgctcg ggcaatgcgc
     8641 cacagttaat agcaataaat ggtttgctgt tgcgcgggct ggcgttgtgg atagcctggg
     8701 cgaaaatctc tttcccggtg ccgctctgac cgttaatcaa aacgctgacg tctgattgcg
     8761 ccaccagccg cgcctgttcc agcaaacgca gcatcagcgg gctgcgggtg acaattgcct
     8821 cgcgccagcg ttcatcggtg gctggcgcgg attgctccag cgcatcgtca attgcctgat
     8881 atagcgcgtc tttgtcgaca ggcttggtga ggaaactaaa aacgccctgc tgtgttgcag
     8941 caacggcatc ggggatagaa ccatgcgcag taagaataat tactggcatt cccggctgca
     9001 ctttctggat ttcagcaaat agctgcatac cgtccatttc atccatccgc aggtcgctga
     9061 taactaaatc tactttttcg cgattcagta cccgtaatcc ttcagcgcca ctttccgccg
     9121 tgaccacact gtagccttcg ctggtcaggc gcaggccaag cagtttcagc aatcccggat
     9181 cgtcatcgac caataataaa tgcgcaggtt tatggctcat caggagtgac ctcatgggtg
     9241 gatggcgcgg gcttttcact ctcgtgcggc gtatccggcg agaaatttcc agccggtttg
     9301 cgggtcgaga gctggcgttc aatatcggtc aggttttcca gcttgcgggt ggtgagttcc
     9361 agttgctgct gtagaacgtg atgttgctgg cgcaatgtat ccagctcgct gtcgctggac
     9421 tgctggagtt tactgtaacg ttggcgctct tccgccagtt gcagttgcag cgcctgaccg
     9481 tcgcgccaga gttgatacag tgggcgaacc tgtgccggga tctcggtact taacgcttca
     9541 atacgcgcga ccagctggcg gcgctcatac ggcgtaattt tggcgtcggc gagcaaaatc
     9601 ccttgtttaa aggtattttg ccagcagccg tcgtcatatt ggcgagcttg ctgacgcgac
     9661 tgcgcaggca ttaaacgatc agcacaatcc atcgcccgca gccagtaaag cggattggtt
     9721 tcggttgatt taccttgcag cgcccagatg tcgctacatt cagtagaaag atagtcagcc
     9781 agttgataaa ccggaatttt ttcttctgct ggcgtatcaa tggctggctt attgtgattc
     9841 tgcacgcaac ccagcaatgc cagacatggc agccctgcca gccacagccg tcggggcaat
     9901 aatcgttgaa aaatgtgtcg catattcacc agacttaaag cctatcccag tgggcgtaat
     9961 tgttgcagac agtctggaca tggacagcgc ggagaaaccg gagcgtacat atcgtacgtg
    10021 aagatttcga gcactgcccg gagccgaact gacaaataaa atagcctgat aggataggct
    10081 gttagcatta tttcgtgttt ttcgacgacg gtaattcaat gcggaaacaa acgtcttgcc
    10141 cgctctcgtc gaccagatac agttcccctt gcatacggcg aatacaatcc ctggcaatgc
    10201 ttaatcccag accgctgccc ttcaccaccc cttttcgctg gtggcttccc tgaaaaaagg
    10261 gttcgaagat catggcgcgt tcctcttgcg gaatgggcgt gcctgtattg atgacatcaa
    10321 tataaacccg cgcaccatgt gaactgctgc gaaggcaaat gttaccggat tcagccccgt
    10381 agtgcaccgc attggagtaa agattatcca gtacgctcat cagcagcatt ggctccgcca
    10441 ggcaagctgt tgctttgaga tcgacgtcgg tatgcatcat tttagcccgt gcgggcaggc
    10501 tatgagcaga aaccactgtc tccaccagcg gtgctaattc aacattctcc agttccaccg
    10561 cactgtccgc ctgtttacgg ttgtaatcaa gcagttgttc gatcagtttt tgcaaattgc
    10621 ggctgctgct atcaagaatg ctcaccacct ctttttgctc tggcgtaagc ggcccgacaa
    10681 cctggtcagc cagtaattca gtgccctcgc gcatactcgc cagtggcgtt tttaattcat
    10741 gagataaatg tcttaaaaat tgatggcgtt gggattccag ccatgacagg cgctcactta
    10801 accaaagaat acgttgccca accgagcgta actcgctcgg tccactgaac gaaacgctat
    10861 tgcccagaga acgcccttcc cccagacggt tgatcatgcg ctcgatattt ttcaccggcc
    10921 cgataatcat ccgcgtgaaa agtagcacca tcaccagact caccagaaat agcaccagcg
    10981 attgccaacc aaaatattgc ccacgttcgg cgatttcacg ctgaagttgc tgcccacgag
    11041 agaacaccac tgtgcgcgtg gcctgcacca tttcggtatt ggcactggca aaggcttcaa
    11101 gacgcgcggc ggcggcagca tcgggaccac tgttgttaca ctgaagttgg gccagattgt
    11161 tcaaatcctg acgcaatgcc tggtaaagtt tatcgtctgg cagtacgcct gcgtgggcat
    11221 cgagcatttc gctgtaacgc ttgcgctggc tttgataaac cttcgcaagc gtagggtcgt
    11281 ccagcacgca atactgacgg tagctacgct ccatctccag cgccgcgttg gtcatcgctt
    11341 cactacgccg ggcatcaata agcgtagtgc ggttaaccag cgccgcctga tcgctaagcg
    11401 cattcaggct ttgccaggct tgccatgcca gcaccaacag gggtagtaga attagcaaaa
    11461 atgccagcat taccagttgt cgtaatgagc ggggaaaaac gggccagcgt ttcaaggtgt
    11521 tactctcgtc agacgcgaat agcctgatgc taaccgaggg gaagttcaga tacaacaaag
    11581 ccgggaatta cccggctttg ttatggaata aggcggtgcc taactcgacg tttcgcccga
    11641 tggttgatat agctacgctg atatcagaag ttggacggca ggcaccttgt tgtgcgtcat
    11701 tcgaatttta tgtagcacgt cccgaagggg ctgacataag tcggtgaatg agccactgct
    11761 tactattatg cagtaactgt gccaataaag aaaatagttt ggtaacgtac tgattatacg
    11821 ttgctttgag ggatttatgg cttcttcgct atttgaatgt aaatcagcca ctgtgtcgcc
    11881 aaaaagagac agcttaagat aaacttatta gattacaata aaatcaatca cttaagtgtc
    11941 gccagaaagc gacacggtaa accacccatt gtcgtgattt acagacacaa aaaagctccc
    12001 ggagttggga gcttatgata gtggttggtg cttaatgccg catccgggct gcaaaaccaa
    12061 tgaactgatg aattacccca actgcttacg cgcattgcgg aaaatgcgca tccatgggcc
    12121 atcctcgccc cagttttccg gatgccagga gttgctgaca gtacggaaaa cacgttccgg
    12181 gtgcggcatc ataatggtga ctcgaccact ttcagtcgtg actgccgtaa taccgttcgg
    12241 tgaaccgttc gggttagccg ggtaggtttc agtgactttg ccgaagttat cgacatagcg
    12301 cagtgccacc agccctttgc tttccagtgc cgccagatgc gccgcatcac gcacttccac
    12361 gcgcccttca ccatgagaga cagcaatcgg catttgcgag cccaccatcc cctgcaacaa
    12421 cagagacggg ctttgggtta cttcaaccag gctgaaacgc gcttcaaagc gatcggaggt
    12481 attgcgcaca aaacgtggcc acaactcact acctgggatc agttcgcgca ggttagacat
    12541 catctggcaa ccgttacata cccccagcgc cagcgtttgc ggacggtgga agaaggttgc
    12601 aaactcatcg cgtacacggt cattgaacag gattgacttc gcccaacctt caccggcacc
    12661 cagcacatca ccgtaggaga aaccaccgca cgcgaccagg gcgtggaaat cttccaggcc
    12721 cgtgcgtccg gtcagcaggt cactcatatg cacgtcgata gcatcaaagc ctgcacggtg
    12781 gaaagctgcc gccatttcaa catgcgagtt cacgccctgc tcacgcagta cggcaacttt
    12841 cggacgtgcg ccagtggcaa tatacggtgc tgccacatct tcgttgatat cgaacgacag
    12901 ttttacattc aggcccggat cggcgtcgtt agatttcgcc tgatgctcct gatcggcaca
    12961 ctccgggttg tcacgcaggc gctgcatctg ccaggtagtt tctgcccacc agacacgcaa
    13021 cgtggtgcgg ctttcgctga atacagtctg cccgttggcg gtaatcacaa aacggtcacc
    13081 ggaaaccgcc tgccctacat aatggacaca atcagcaagc ccatgctgtg ccagtacgga
    13141 ctcgaccgct tcacggtcag cggcacgaac ctgaatcacc gcacccagtt cttcgttaaa
    13201 caacgccgcc aggcgatcgt cgcccagaga ggcaatatcc gcgttaatgc cgcaatgacc
    13261 agcaaaggcc atttccgcca gcgttaccag caggccgcca tcagagcggt cgtggtatgc
    13321 gagcagctta cgctgtgcaa ccagcgcctg aatcgcgtca tagaagcctt tcagttgcgc
    13381 gacgtcgcgt acatctgccg gtttgtcgcc aagctgacga taaacctgcg ccagcgccgt
    13441 tgcgcccagc gcgttattgc ctttgcccaa atcaatcagc aatagtgcgt tatcttcggt
    13501 agaaagctgt ggcgtgatgg tgtgacgcac atcttccacg cgggcaaatg cagaaatcac
    13561 cagcgacagc ggcgacgtca tttcgcgctc ttcgttacct tcctgccagc gggttttcat
    13621 cgacatagag tctttaccca ccgggatcgt caggcccagc gccggacaaa gctcttcgcc
    13681 cacggcttta acggcttcat acaggcccgc atcttcacca gggtggcctg ccgccgccat
    13741 ccagttggcg gaaagtttaa tgcgtttgat atcgccaatc tgtgttgcgg caatattggt
    13801 taacgcttca ccgaccgcca gacgggcaga ggcggcgaaa tccagcagcg caaccggcgc
    13861 acgctcgcca atcgccatcg cttcaccgta gtagctgtcg aggctggcgg tagtgaccgc
    13921 gcagttagcg accggcacct gccacggacc caccatctga tcgcgcgcta ccatgccagt
    13981 tacgctgcgg tcaccgatgg tcaccaggaa agttttctcc gccacggtcg gcagatgcag
    14041 tatgcgtttc accgcgtctg caatggtgat cccttcacgg accagcgcat cgcccttcgc
    14101 tttcagcgtt tgtacatcgc gggtcatctt cggcgtttta ccaagcagga cgtccagcgg
    14161 cagatcgatc ggctgattat caaaatgacg atcgtgtaga gaaagatgca gttcttcggt
    14221 cgcttcacca atcaccgcgt agggtgcgcg ctcacgctta cacagttcgt caaacagcgg
    14281 taattgatcg gcagcaaccg ccagcacgta gcgttcctgg gattcgttac accagatttc
    14341 cagcgggctc atgcctggct cgtcgctcag aatgtcgcgc agttcaaatt taccgccacg
    14401 cccgccgtcg ctcaccagtt ccggcatagc gttagaaaga ccgcctgcgc caacgtcgtg
    14461 gataaacagt attgggttgg catcaccaag ctgccagcaa cggtcaatca cttcctggca
    14521 gcgacgctcc atctccgggt tgtcgcgctg tacggaagca aagtcgaggt cggcatcaga
    14581 ctgaccagac gccatggaag acgccgcgcc gccgccaaga ccgatgttca ttgccgggcc
    14641 gccgagaacg accagcttcg cgccaacgtt gatctcgcct ttttgtacgt gatcggcgcg
    14701 aatgttgccg atcccgcccg ccagcatgat cggtttgtga taaccgcgca gctcttcgcc
    14761 gttgtggctg ttcacttttt cttcataagt acggaagtag ccgttcagtg ccggacgacc
    14821 aaattcgttg ttaaacgccg caccgcccag cgggccttcg gtcatgatgt ccagcgcggt
    14881 gacaatgcgc tcaggcttac cgaaatcttc ttcccacggc tgttcgaagc caagaattcg
    14941 caggttggaa acggagaaac caaccaaacc cgctttcggc ttcgcgccgc gcccggtggc
    15001 accttcatcg cggatttcac cgccggaacc ggtcgccgcg cccggccacg gagaaatcgc
    15061 cgtcgggtgg ttgtgagttt cgactttcat cagaatatgc gccggttcct gatggaaatc
    15121 atagcggccc gtttcgtggt cagcaaagta gcggcccact tcagaacctt ccattacggc
    15181 ggcgttatct ttataagcag agagaacgtg atctggcgtg gtttcgaaag tatttttgat
    15241 catcctgaac agcgatttcg gctgttgttc accgtcgata atccagtcgg cgttaaaaat
    15301 tttgtggcgg cagtgctcag agttcgcctg agcgaacata tacagctcga tgtcgttcgg
    15361 gttacgacca agctttgtga aagcatcctg cagatagtca atttcatctt ccgccagagc
    15421 caggccaaga cgcaggttag cgtcgatcag cgcctgacgg ccctgcccca gcaaatcaac
    15481 gcttgtgacc ggagtcggtt gatggtgggc aaacaactgc tctgcatcat ctaaatcaaa
    15541 aaagacagtt tccatcatgc ggtcgtgcag ttcagcggta acctgctgcc attgttcatt
    15601 ggtcagcgta ccggcttcta tatagtaagc aacgccgcgc tcaaggcggt ttacctgttg
    15661 tagcccgcag ttatgggcaa tatcggtcgc tttcgaagac cagggagaga tggtgccagg
    15721 acgcggggtc accagcagga gtttgccttg cggggcgtgg ctggcgagtg ccggaccata
    15781 tttcagcagg cgttcaagtt gtgcgtgctc atcatcgttt aacggcgcat tgaggtcagc
    15841 aaaatggaca tactcggcgt aaatattgtg aaccgggagc ctggcagcct gaaaacgtgc
    15901 cagcagtttg ttgattcgga atgccgacag tgcaggcgaa ccacgcagaa tttccatcat
    15961 aagtctctcg tcttctaagc tttcggtgta cccaaggggg ggggaaacgg gcgtcattat
    16021 aaagaatctg atgcgctgac gaaaccgttt gcgtggaaat aaaatcacca tcgtgaatta
    16081 gcaacgcgtg ccgccaatgg ctgtaataag ttgccatctg gcgcaggttt acgcaaaatg
    16141 ccgctcattt atgagtaaac ctttcactat tattacgttt tttcaagctg ggacgcgcac
    16201 gacacagaga attaactaat tgaaaaaatt aaagattaat tatctgttca tcggcattct
    16261 ggcactgctg ctcgcggtcg ctctctggcc atccattccc tggtttggta aagccgacaa
    16321 ccgtatcgcc gccattcaag cgcggggaga gttgcgtgtg agcaccattc atactcccct
    16381 gacttataac gaaatcaacg ggaaaccttt tggcctggat tacgaactgg cgaaacagtt
    16441 tgccgattac ctcggcgtaa aactgaaagt gaccgtgcgg cagaatatca gccagctgtt
    16501 tgacgacctt gataatggta acgccgacct gctggcggca ggactggtct ataacagtga
    16561 gcgggtaaaa aattatcagc ctggccctac ctattattcc gtgtcacaac aactggttta
    16621 taaagtgggt cagtatcgcc cacgtacgct gtgcaacctg acggcggagc aactcaccgt
    16681 tgcaccgggt catgtggtgg ttaacgatct ccagaccctg aaagaaacaa aattcccgga
    16741 attaagctgg aaggtagacg acaaaaaagg ctctgcggaa ttaatggaag atgtcatcga
    16801 aggaaaactc gattacacca ttgctgattc tgtcgccatc agcctgtttc agcgcgttca
    16861 cccggagctc gccgtagcgc tcgatatcac cgatgaacaa ccggtgactt ggtttagccc
    16921 gttagatggc gataataccc tttccgccgc cctgctcgac ttcttcaacg aaatgaatga
    16981 agacggtacg ctggcacgca ttgaagagaa atacctgggg catggcgatg attttgatta
    17041 cgtcgatacg cgcacatttt tacgcgccgt cgatgcggta ctgccgcagt taaagcccct
    17101 gtttgagaaa tacgccgaag aaattgactg gcgtttgctg gccgctattg cttatcagga
    17161 atcgcactgg gatgcacagg ccacttcacc gacgggtgtg cgcggcatga tgatgttaac
    17221 caaaaatacc gcgcaaagcc tcggcattac ggatcgtacc gatgccgaac agagcatcag
    17281 cggtggcgtg cgttatttgc aggatatgat gagtaaagtg ccggaaagtg tgccggagaa
    17341 cgagcggatc tggtttgccc tcgctgcgta caatatgggc tatgcgcata tgctggatgc
    17401 ccgcgccctg acggcaaaaa ccaaagggaa tcctgacagt tgggctgacg taaaacagcg
    17461 tctgccttta cttagccaga aaccctatta cagcaagctg acttacggct acgctcgtgg
    17521 acatgaagcc tacgcttatg tcgaaaatat tcgtaagtat caaattagcc tggtgggtta
    17581 tctgcaagag aaagagaagc aggctacaga agcggcgatg caactggcgc aggattatcc
    17641 ggcggtatcg cctacggagt tgggcaaaga gaaatttcct tttctctcgt ttctttccca
    17701 gtcgtcatca aactatttga cccattctcc ctctctgctg ttttccagga aagggagtga
    17761 agagaaacaa aattaatccg tcgaggattg cgcttttttc tgcgctttaa tttcctggcg
    17821 gcgcatgcga aagaagtcac tgagcaacgc cgcgcactca tccgccagta ttccttccgt
    17881 aatttccact cggtgattca tacccggatg atgcagcaca tccattaaag atcccgcagc
    17941 gccagttttc gcgtcacgcg caccaaagac cacgcgacca atgcgactgt ggatcatcgc
    18001 tccggcacac attacacatg gttcaagcgt gacatacaac gtggcgtcga tcagacgata
    18061 attttgcatc accagaccac cctgccgcag ggccatgatt tctgcatgtg cggtgggatc
    18121 atggcgacca atcgggcggt tccaaccttc gccgattacc cgattgttat gcactaatac
    18181 cgcgccgacc ggcacttccc gctcatccca ggcacgtttc gccagcgtca gcgcgtgacg
    18241 catccagtat tcgtggctaa attcgacttc agacaaaaag aaaactccgg ttataaaagc
    18301 gcggcgcatt atacacggac gctatgcttt actctattcc agttgctgga gttcaccgcg
    18361 cggggttact cgccaacgat gctgacagaa ataaagcagc ggattgtcct gattactgtc
    18421 gctatagcca ctgtacagcc gcagcggagt gccgattttg cgctccagtt gtgcgacctt
    18481 ttcatgtccc agacaacgca tcgtcaatac ccaaccacca tagccacgct gaatttggct
    18541 ggcgataaga ttaacccgcg gcagccaggg cttatcgaaa taaaccgctt caaccagcgg
    18601 ctgcggagag ccggtaatca accagatatc agcatcggaa cttaacaggt aggtggttaa
    18661 tcgctcctga accagcggaa aggcggtaac attgtcgcga aaccagcgca cgaaatcggc
    18721 ctgcaacgtc tgtaaacgtg cttcgctgtg accaaaagtg cacccccaca gaagcagact
    18781 catcggccag cgtgccgcac gaccttttat caataacgca atggctataa tcggtaacaa
    18841 cggcaggaca agtaacgcat tcagcggttg gcgacgtagt aaatagcgca gaaaactgcc
    18901 gaacatatcc tgctgatgca atgttccatc taagtcaaaa aacaccacac gacgctcgtg
    18961 agttgccaaa ccatactcct ctggactgaa acatcctgat taattttcgc tactacatag
    19021 cctaacagat agatcatcac ttttccggca acaatcgacc gcatcatggc taactggaat
    19081 ttttaattca tggcaattag cggcaatgga atataaaatt cactcgcgtg tgtctcatat
    19141 tgcctgttgt cgccactatt tcatcgcgag gaaagatatg aacggcttac ttcgtatccg
    19201 tcagcgttac caggggcttg cccagagtga taaaaaactg gcggattatc tgctgctaca
    19261 acctgatacg gcgcgccatt taagctctca gcaactggcc aacgaagccg gagtcagtca
    19321 gtccagcgtc gtgaagttcg cgcaaaaact cggctataaa ggttttccgg cgcttaagtt
    19381 ggcgttgagt gaagcgctgg caagccagcc ggaatcgccc tccgtgccca ttcataacca
    19441 aatccgcggt gatgatccgt tacggctggt cggcgaaaaa ctgattaaag aaaatactgc
    19501 cgctatgtac gcaacgctaa acgttaatag tgaagagaaa ctgcatgaat gcgtaacaat
    19561 gttgcgctct gcgcggcgga taattctgac cggtattggc gcttcgggtc tggtggcgca
    19621 aaactttgcc tggaagctga tgaagattgg cttcaatgct gccgcagtgc gcgatatgca
    19681 tgcgctactc gcaacagtac aggcgtcgtc ccctgacgat ctgttattag ccatttccta
    19741 caccggtgta cgacgcgagt taaacctggc ggcagatgag atgctgcgag tgggcggaaa
    19801 agtgctggcg attaccggct ttactccgaa tgccctgcaa cagcgtgctt ctcattgcct
    19861 gtataccatt gccgaagaac aagcgacaaa cagtgcttca atctctgctt gtcacgctca
    19921 gggaatgtta acggatttgc tgttcattgc gctgattcag caggatctgg aactggcacc
    19981 agaacgtatt cgtcatagtg aagcgctggt gaaaaaactg gtctgagtaa agaatgcgcg
    20041 tataatgccc gcccggtttg tgttgttttg agagtttcct tatggcgttg ttaatcacta
    20101 aaaaatgcat caattgtgat atgtgtgaac ccgaatgccc gaatgaggcg atttcaatgg
    20161 gagatcatat ctacgagatt aacagcgata agtgtaccga atgcgtaggg cactacgaga
    20221 caccaacctg ccagaaggtg tgcccgatcc ccaatactat tgtgaaagat ccggcgcatg
    20281 tcgagacaga agaacagttg tgggataaat ttgtgctgat gcaccacgcg gataaaattt
    20341 aatattctac tctggaagta gagtattaat tatattactg ggaagcctta acgccattat
    20401 atttatttaa ttgatgacat tagcataatc attcactaag ttaatttata tagtatctgc
    20461 caagacactt atttatagtt attaaaggcg cgtccgattg gttcaccgga cgcaccttaa
    20521 gtacgtttcc ttgtgttata agaacagaag gatcagctgt aaaacagcaa tgatgatttt
    20581 gatgacccgt ttaatcaggt atcggcaatc agtcattcgt ttttccttaa acaaggaatg
    20641 cagccgttca gattagccct tacatctccc caaaactgaa cgtgcgagtt attgagggtg
    20701 catgctgcac tccacaccag agctttgacg acaccactcg tttcaatggg ggaattctgt
    20761 ggcatggtgt aaagcacagc aaaatcttca ataacgaagc caattttaat gtacttacga
    20821 attggcggtc acgttaatct ttccatcaat attgctttct tcgtaaaggc tcgagttttt
    20881 atgctaaaga ttgcaagttg cttgtaaaag ataagtacac tgatccataa tcgctgttgt
    20941 tgagggtgca tgctgcacaa aattaaagtt aaaaagtaaa acccccgttc cttaccagtt
    21001 cgggggtttt actttttaaa gagaacggta ttattttaac tttcaataat taccgtggca
    21061 caagcatagt ggcgttcatc tgccagcgtt acatgcatat ttacaacgcc gagcttttcc
    21121 gccagtttta atgcctcacc ccatagccgt agccgtggtt tgccgagctc atcattgaat
    21181 acttcaaatt gattaaacgc cagaccattg cggatcccgg tgccaaacgc ttttgctgcg
    21241 gcttctttca cagcaaaacg cttcgccaga aaacgcaccg gctggtggtg cgttttccag
    21301 attgcccatt cgttatcgct taatacgcgg cgtgccaggc gctcaccgga tcgggcgatc
    21361 actgcttcta tgcgagcgat ctctacgata tccgtgccta aacctaatat tgccattagc
    21421 cacgcgcttc cagcatcaga cgcttcattt ctgccaccgc atctttcagt ccggtcatca
    21481 ctgcacggcc aataatggca tgaccgatat tcagttcatg catctcaggg atggcggcaa
    21541 tggctttcac gttgtgatag gtcagaccgt gtccggcgtt aactttcaga ccgagactag
    21601 cggcaaaggt cgcggctttg gcgatacgca ccagctcttg cgcctgttcg gcgtcagttt
    21661 tggcatcagc atagcaaccg gtgtggatct cgataaacgg tgcgccaacc tctgccgcag
    21721 ctttgatctg ctcttcatcg gcgtcgataa agagagaaac ctgaatcccg gcatctgtca
    21781 gacgtttgca ggcatcgcgc attttttcac gctgccctgc aacgtccagg ccgccttcgg
    21841 ttgttacttc ctgacgcttt tccggtacca ggcagcaaaa atgtggcttc gtctcaacgg
    21901 cgatcgccag catctcttcg gtcactgcca tctccagatt cattcgggta tccagcgtct
    21961 gccgcaggat gcgcacatcg cggtcagtaa tgtggcggcg atcttcacgt aaatgcacgg
    22021 taatgccgtc cgctcccgcc tgctcggcaa taaacgccgc ctgcaccgga tccgggtaag
    22081 cagtaccgcg tgcgttacgc agcgttgcaa tatggtcaat gttgacgcct aacagtaatt
    22141 cagccatgac aatcctcatc attcataatg tgttttcacc gttcgcttag gcataaactg
    22201 ccggaacagt tccctgctct ttaatggttt accgccaaga tacggcttaa gcgccatgcg
    22261 ggtaaagcgt ttcgcggcgc gtagtgtgtc tgcgtcagga aattcccgcg cgtttaacgc
    22321 ttttaactgc cttccggtga acgttttatt gtcgataacg acgcttgcga taaacccttt
    22381 ttcttcgcga taacgatacg tcatggtgtc atctaccggc tcgccgctac ccgcgcaata
    22441 ggtaaaattg acgccatagc ccagatgccc gagcagtgcc agttcaaagc ggcgcagcgc
    22501 gggttctggc gtaccagtgg cacctgcaag agactgaatg cagtgcaaat aatcgaaaaa
    22561 gagttcagag aagcgcgtct cgtattccag tacgcgggag agaagttcgt tgatgtacag
    22621 accgctgtaa agcgtgatac cgcttaatgg cagcgccagc gagacagctt cagcactgcg
    22681 cagcgttttg acttcgccac gcccgccgaa acgtagcaag agaggggtga aaggctgtaa
    22741 tgcacctttc agagtagagc gtttagagcg tgcgcctttg gcaaccagac gcacgcgacc
    22801 cgattcctcc gtgaagacgt ccagcatcag gctggtttcg ctccacgggc gactatgcag
    22861 gacaaatgcg cgctgccagc cttccatcgg agtgactctt aaagatcgtc aacgtaaccg
    22921 agactgcgca gtgcgcgttc gtcgtcggcc caaccggatt tcacttttac ccacagttca
    22981 aggtggacag gcgcttcgaa catttcctgc atgtctttac gcgcttcaat cccgatggtt
    23041 ttgatcttgg cccctttgtt gccaataacc atcttcttct gcccttcacg ctcaacgaga
    23101 atcaaaccat tgatgtcata accaccgcgt tcgttagaga cgaaacgttc gatctccacg
    23161 gtcacggagt acggcagttc agcgccgagg aaacgcatca gtttttcgcg gatgatttca
    23221 gacgccataa aacgctgtga gcgatcggtg atgtaatctt ccgggaagtg atgggtcgct
    23281 tcaggcagat gcttacgcac gattgctgcg atagtgtcga cattcagccc ggtttcagca
    23341 gagatcggca cgatatcgag gaagttcatc tgacttgcca ggaactgtaa gtgcggcagc
    23401 agatcggctt tttcctgcac gttatccact ttgttcaccg cgaggatcac cggcgctttg
    23461 ccatcgcgca gtttgttgag caccatttcg tcgtccggcg tccagcgggt gccttcaacg
    23521 acaaaaatca ccagctcaac gtcgccaata gagctgctcg ccgctttgtt catcaggcgg
    23581 ttaatagcgc gtttttcttc catatgcagg ccaggggtat caacgtagat cgcctgatac
    23641 gcgccttcag tatggatccc cacaatgcgg tgacgagttg tttgcgcttt gcgggaggtg
    23701 atggagatct tctgccccag cagtttgttc aacaatgtgg atttgccaac gttcggacgt
    23761 ccgacgatgg caataaatcc gcagtaactt ttatcgatgc tcattccagc tccagttttt
    23821 tcaacgcctg ttcggcggca gcctgctcag ccttacgacg gcttgaacct gtgccaacca
    23881 ccggttcact caggccgctg acctggcagt ggatagtaaa ttcctgatcg tgcgcttcgc
    23941 cacgtacctg gactaccaga taagtcggca gcggcagatg gcgaccctgc aaatattctt
    24001 gcaagcgcgt tttcggatct ttttgtttat cgcctgggct aatttcgtcc aaacgagttt
    24061 gataccagtt gaggattaat ttctcgacgg tttgaatatc actgtcgagg aatacgccac
    24121 caattaatgc ttcgacggta tcggcgagaa ttgactcacg acgaaatcca ccgcttttaa
    24181 gttcaccagg ccctaaacgt aagcactcgc ctaactcaaa ttcgcgcgcc agttccgcca
    24241 gcgtattgcc acggaccagc gtggcgcgca tccggctcat atcgccttca tccacacgag
    24301 ggaaacggtg ataaagcgca ttggcgataa cgtagctcag aatagagtcg cctaaaaatt
    24361 ctaaacgctc gttatgtttg ctgctggcac tacgatgagt taatgcctgc tgcaacagtt
    24421 cctgatgatt aaaagtgtag cccagcttcc gttgaagccg attaattacg atggggttca
    24481 tgcgatacca ataaataaat gcgtcaacaa ttcagcacac gaaacagacc tgatatacat
    24541 ggctctgcta actgcttcgc tgcagtttca gtttaccggt atatggggac caacgctgtt
    24601 tcgtgtgccg tggcaacctg gaggtgccaa ccttaaactt cgggggaata ttctatacac
    24661 aacgacgggg gatgtcgtta gccacgggag atttatctca taaataattc acgttgtcgc
    24721 cataacggcg acaacgtgaa cgaagatggg ctattaatgg atgccgccaa tgcgacttaa
    24781 gcgcacacct gtcggccatt cgccttcttg cttatcgaaa ctcatccaga tagccgttgc
    24841 ccgaccgacc agattcgctt caggcacaaa accccagtaa cggctgtccg cgctgttgtc
    24901 gcggttgtcg cccatcatga agtattgtcc cggcggaaca atccaggttg ccagttgttg
    24961 ccctggctgt tggtaataca tccccacctg gtcctgcgca atcggcactg tcagaattcg
    25021 gtgcgtcaca tcacccagtg tctctttacg ctcggaaaga cgaattccat tttctttggt
    25081 ttcgtttttc ggcacttcaa agaatccgct ggtcgcttcc ccaccattac ggcgtgagaa
    25141 ggtctgaacg aaatcgctcg gttccacgtt ggagtaggtg accggtagcg cgttttcaca
    25201 cgcctggccg gaactgcatc ccggttgaat cgtcagctct tttgagaccg gatcgtaagt
    25261 gactttatcg cccggtaaac ccaccgcgcg cttgatgtaa tcaagctttg gatcttccgg
    25321 atatttaaag accacgatat cgccgcgttt cggatgaccg gtttcgatca gcgttttctg
    25381 gtagatagga tctttaatgc cataagcaaa cttctctacc agaataaaat caccgattaa
    25441 cagagtcggc atcatcgaac ctgacgggat ctggaacggt tcataaataa acgaacgtac
    25501 aatcaatacg atagccagca ccggaaaaac agaagcaccg gtttccagcc agccaggctt
    25561 cggcgcaacc tttttcaggg ttgctttatc cagtgagtca ccggcagccg cctgcgccgc
    25621 tgcctgacgt tcccgccgtt taggtgcgaa aaagaattta tccacgcacc ataaaatgcc
    25681 cgtcaccagt gtggcaatca ccagaatcag ggcaaacata ttcgccatgc caactcctaa
    25741 gggttatttg ttgtctttgc cgacgtgcag aatggcgagg aacgcttcct gcggcagctc
    25801 gacgttaccg atctgcttca tgcgtttctt accttctttc tgcttctgca gcagcttttt
    25861 cttacggctg atatcgccgc cataacattt agccagtacg tttttacgca gctgtttcac
    25921 ggtggatcgc gcaataatgt gcgtaccaat cgctgcctga atggcgatat caaactgctg
    25981 gcgtgggatc agatctttca tcttctccac caactcgcga ccgcggtttt gcgaattatc
    26041 acggtgggtg atcagcgcca acgcatcaac acgttcaccg ttgattaata cgtctacacg
    26101 taccatgtcg gacgcctgga agcgtttgaa gttgtaatcc agagacgcat aaccacgcga
    26161 ggtagatttc aggcgatcga agaagtcgag caccacttcc gccatcggga tctcgtacgt
    26221 cagcgccacc tgattaccgt ggtaaaccat attggtctgc acgccgcgtt tttctacgca
    26281 cagcgtaata acgttgccga gatatgcctg cggcagcagc atgtgacact ctgcaatcgg
    26341 ctcgcgcagt tcgtaaatgt tatttaccgc aggcagcttg gatgggctgt cgacgtagat
    26401 aacttccctt gacgtggttt caacttcata cactacggtc ggcgcagtgg tgatcagatc
    26461 cagatcgtat tcacgttcca gacgttcctg gatgatctcc atgtgcagca ggccaaggaa
    26521 gccgcagcgg aaaccaaagc ccagcgcgct ggagctttcc ggctcataga acagtgaggc
    26581 atcattcagg ctgagtttac ccagcgcgtc acggaaggct tcatagtcgt cggaacttac
    26641 cgggaacaga ccggcgtata cctgcggttt gactttctta aagccaggca gcgccttttc
    26701 tgccggatta cgcgccagcg ttaaggtatc gccgactgga gcgccgtgga tatctttaat
    26761 cgcacatacc agccagccta cttcgccaca tttcagttca gtgcggtcaa cctgtttcgg
    26821 cgtgaagatg cccagacggt cggcgttata ggtctgcccg gtactcatga ctttcacttt
    26881 gtcgccctta cgcagggtgc cgtttttaat acggataagt gaaacaacgc ccaggtagtt
    26941 gtcgaaccat gagtcgataa ttagtgcctg caacgggcct tccggatcgc cttccggcgg
    27001 cggaatgtcg cgcaccagac gttcgagaac gtcctgcacg ccaacgccgg ttttcgctga
    27061 acagcgcacc gcgtcagtgg cgtcgatgcc gacgatatct tcaatttctt ccgccacgcg
    27121 ttcaggatcg gctgccggca ggtcaatctt gttcagtact ggcaccactt cgagatccat
    27181 ttccatggcg gtgtagcagt ttgccagggt ttgcgcttcc acgccctgcc cggcgtcgac
    27241 caccagcaat gcaccttcac aggcagccag cgaacgggaa acttcatagg agaagtctac
    27301 gtggcccggg gtgtcgataa agttaagctg ataggtttcg ccgtcagacg ctttgtagtc
    27361 cagcgtcacg ctttgcgctt tgatggtaat gccacgctca cgctcaagat ccatggaatc
    27421 gagaacctgc gcctccattt cacggtcaga caggccaccg cagatctgga taatacggtc
    27481 agacagcgtc gatttaccgt ggtcaatgtg agctatgatc gaaaagttac gtatattctt
    27541 cataaagtat gattattgtg ccttaatgcc cggttaacca ggcttttaga agtcgctgtt
    27601 ctgagcttaa cgtctgtatt aatagaaacg ccgcattcta cactacaaca ttgaggcgag
    27661 gaaatgttca taccgtatgg attgtggtat ctggaaacgt cctcgcattt gttatgcaaa
    27721 atgcaacaaa gccagtgaaa tcactggctc gcgtcttccg aagatgtttc aaatcgcaca
    27781 aggccaggcg gcaatgccac gcttaagatg atcggttgcc attctgcccg ggcagcaaac
    27841 ttacgcgagt agccgcgcgc aatcaggaac ccgccaatac cgccgaggac cgcaccacat
    27901 aatgctgcga cgtcagaagc aaagagtagc tgaaatagcg aagcgatgag gaataatccc
    27961 accagcggcg acatataaac cagtaatgcg gagctaagca ggctgccttc ggcgatcccc
    28021 aattccactt tttgccccgg cactaacggt tcatcacagg gtacgacaat ggtatgcgtg
    28081 gtttgcgggc caagtttatt caacacgcgg ctaccgcaac cggcgcgtga agcgcagctg
    28141 ctgcatgaag ctttaacatc acaactgacc agcgcctgcc cgttttgcca ggagacgacg
    28201 gtagcccact ctttgatcat tgcgctgccc cgaacttaat attctcggca atgcgtttcg
    28261 ccgtttgcgg cggcagttca ccgacaatgg tgatttcggc gttatcacgt acgcttgtac
    28321 tgacggttct gcgtccggtg cgcaacatct gatcggtgct cgatggcgta gcgcggttaa
    28381 cgtttaccga gaagctgaat aatccgtcag aatagagacg tgattcgata ggcatgttgt
    28441 ccatcgtcgg tagcggacgt cgactactgg aaacttcgct aaaaccctgt ggcaaccagg
    28501 ttggcgtcca gctgaattta gctttttcac ctacaggaac agaaagcaac ggcggcaaat
    28561 ttgccttcgc cagcgtctgc atactgctgc tgatatcctg attgacgtta aaagcaatca
    28621 cgcgaaattg ttccagcgtt tcaccatcgc gatcaaggag atcaacccgc atcggtaatt
    28681 tcgattcggt gtccatccac acgatgtagc tgtagcgtgt accatctcgg gcaaccacgc
    28741 gaatgacttc gcaaagacga tcagcaatac gcgtgcgccc gacggagata aagtcgtagt
    28801 aaggagaaag gcgtttgaaa tcggtataga cgagcgatgg cagagaatca acaatgtaat
    28861 cgccattaag cgtgaacggt tcaagtcccg gttcaaaata gctgatttca tcgccgcgct
    28921 gtaccacttc ccggcgcggg ccatccattt gcaacaattg tgcaagagga cggttatcga
    28981 ggcgtgcatg tcgataacgc agagactcaa caccctgttt attgatgctg atgaatgaca
    29041 gctcgtaatt cagtgactga ctggccaggt tcatctgctg taataacgcc ccggacgcgg
    29101 gagtggccga ggcgttagca gagaataaca ggctacctgt cactaatgac atggcaaacc
    29161 aaagttgctt cattactgcg attgcgttcc taaagtttga attcctggca cctgtacagc
    29221 ggcttgctgg gtttgcgcct gctcaaactg aagctgttca gagtggagtc ggcgttgcag
    29281 ttcgtaatcc tgcaacattg cattaatgcg acgacgctgc tcctgtacct gctgctgttg
    29341 accattgttt gcggtcgctt cagaaggtac tcccaggctt accgggctgg ctttacccat
    29401 catcggcagt gtattaaata ccggcgtttc gggctgctgg gacgtttcag attgtccatt
    29461 atagtgctgg acgccaacga taactgcaag cgatacgcat gctgctacgc ccatttgggt
    29521 aagctgtgcc gcccacggac gtactttctg ccagaatggc attttctgcc attgatgcgg
    29581 cgcaggctgg gcttccggga tcaatgtcgc cggttgacgt actggctctt cttcaatggc
    29641 ggccatcacg cgtgaagaga tatcgaaatg gagcacctcg ggagtatcac cccgcattga
    29701 gtcacggatt aagtgatagc tttcccaggt tttctgcatt tctgggttat gagccagttc
    29761 gttaagcagc tcactatcca gcgtttcgcc atccattaaa gcggaaagtt gttctttctg
    29821 catgcctaat acccttatcc agtatcccgc tatcgtcaac gcctgataag cggttgaact
    29881 ttgttatcaa tagcttccct cgctcggaag atacgtgaac gcaccgtacc taccggacaa
    29941 tccatgatag cggctatctc ttcatagctc aggccatcca gctcccgcaa ggttattgcc
    30001 atgcgcaaat cttccgggag ggactcaata gttcggaaaa ctatctgtct cagttcttct
    30061 gacaacatta agttctcagg gttcgaaatt tctttcaacg cgccgccact ttcgaagttt
    30121 tcagcttcaa tggcatccac atcactggaa ggtggacgac gcccctgagc aaccaggtaa
    30181 tttttcgctg tatttacagc aatccgatac agccatgtat aaaaagcgct atctccccgg
    30241 aacgaatcca gcgcacgata ggctttaata aaagcttctt gtaccacatc gggaacatca
    30301 cccgacggca catagcggga aaccagactc gccactttat gctgatagcg cactaccagt
    30361 aagttaaagg ctttctgatc tcccttctgg acccgttcaa ccaggacctg gtccgttaac
    30421 tgctcgctca tccgaggtaa agtctcccca aaccaaattt ccacgcgcta tcgaaacgcc
    30481 actccattag ctgcaatttg agcaagcaaa gggttagagt gtctcgtttt tgtaaagttc
    30541 cgtaacgcat ctgtttttgt ttgtcatgct gtagacggat cattatctat cattataagt
    30601 ctacagaatc tgaacatcgc attatctgtg tagaaatgcc catttaactg cctgaagagt
    30661 aacccaacgg cctttttatt tcaccaccta atcctccacc agccagtaac ttctcttttt
    30721 ctcgccgccc tgcatcagcg tgtttagcaa ctgtaacaaa tattaaaata gcaggtgttt
    30781 attcgcacaa catgatgcta tgctgaccaa accgtgttta gtaaattaaa caaagaaaat
    30841 gaatactctc cctgaacatt catgtgacgt gttgattatt ggtagcggcg cagccggact
    30901 ttcactggcg ctacgcctgg ctgaccagca tcaggtcatc gttctaagta aaggcccggt
    30961 aacggaaggt tcaacatttt atgcccaggg cggtattgcc gccgtgtttg atgaaactga
    31021 cagcattgac tcgcatgtgg aagacacatt gattgccggg gctggtattt gcgatcgcca
    31081 tgcagttgaa tttgtcgcca gcaatgctcg ttcctgtgtg caatggttaa ttgaccaggg
    31141 ggttttgttt gatacccacg ttcaaccgaa tggcgaagaa agctaccatc tgacccgtga
    31201 aggaggacat agtcaccgtc gtattcttca tgccgccgac gccaccggta gagaagtaca
    31261 atccacgctg gtgagcaagg cgcagaacca tccgaatatt cgtgtgctgg agcgcagcaa
    31321 cgcagttgat ctgattgtct ctgacaaaat tggcctgccg ggcacgcgac g
//
LOCUS       DAJVUK010000030        30870 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.030, whole genome shotgun sequence.
ACCESSION   DAJVUK010000030 DAJVUK010000000
VERSION     DAJVUK010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30870
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.030"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            248..631
                     /gene="secE"
                     /locus_tag="OQQ57_001309"
     CDS             248..631
                     /gene="secE"
                     /locus_tag="OQQ57_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HCS1956139.1"
                     /translation="MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            633..1178
                     /gene="nusG"
                     /locus_tag="OQQ57_001310"
     CDS             633..1178
                     /gene="nusG"
                     /locus_tag="OQQ57_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HCS1956140.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            1338..1766
                     /gene="rplK"
                     /locus_tag="OQQ57_001311"
     CDS             1338..1766
                     /gene="rplK"
                     /locus_tag="OQQ57_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HCS1956141.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGAGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            1770..2474
                     /gene="rplA"
                     /locus_tag="OQQ57_001312"
     CDS             1770..2474
                     /gene="rplA"
                     /locus_tag="OQQ57_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HCS1956142.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            2887..3384
                     /gene="rplJ"
                     /locus_tag="OQQ57_001313"
     CDS             2887..3384
                     /gene="rplJ"
                     /locus_tag="OQQ57_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HCS1956143.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            3451..3816
                     /gene="rplL"
                     /locus_tag="OQQ57_001314"
     CDS             3451..3816
                     /gene="rplL"
                     /locus_tag="OQQ57_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HCS1956144.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKALEEAGAEVEVK"
     gene            4136..8164
                     /gene="rpoB"
                     /locus_tag="OQQ57_001315"
     CDS             4136..8164
                     /gene="rpoB"
                     /locus_tag="OQQ57_001315"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004870488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HCS1956145.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            8241..12464
                     /gene="rpoC"
                     /locus_tag="OQQ57_001316"
     CDS             8241..12464
                     /gene="rpoC"
                     /locus_tag="OQQ57_001316"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HCS1956146.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQML
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            12677..13216
                     /locus_tag="OQQ57_001317"
     CDS             12677..13216
                     /locus_tag="OQQ57_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-shock protein C"
                     /protein_id="HCS1956147.1"
                     /translation="MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYR
                     FWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPES
                     NVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVK
                     FFTIAYNLLRNKQLPQPSK"
     gene            complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="OQQ57_001318"
     CDS             complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="OQQ57_001318"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HCS1956148.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAKTEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL"
     gene            complement(14756..15526)
                     /gene="thiG"
                     /locus_tag="OQQ57_001319"
     CDS             complement(14756..15526)
                     /gene="thiG"
                     /locus_tag="OQQ57_001319"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418418.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HCS1956149.1"
                     /translation="MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKR
                     VDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDA
                     RWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQG
                     LETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAK
                     AFRLAVEAGLLARQSGPGSRSHFAHATSPLTGFLEASA"
     gene            complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="OQQ57_001320"
     CDS             complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="OQQ57_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HCS1956150.1"
                     /translation="MQILFNDQPMQCATGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHILQDGDQILLFQVIAGG"
     gene            complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="OQQ57_001321"
                     /pseudo
     CDS             complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="OQQ57_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709786.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
     gene            complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="OQQ57_001322"
     CDS             complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="OQQ57_001322"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709787.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HCS1956151.1"
                     /translation="MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGISLARAPAVIATGVGSIAVISAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="OQQ57_001323"
     CDS             complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="OQQ57_001323"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HCS1956152.1"
                     /translation="MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYLTGTHSGVRV
                     PMREIQLSPTLIGGSKEQPQFEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(19071..19171)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="OQQ57_001324"
     CDS             complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="OQQ57_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HCS1956153.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQKVLSDIGEALEARFVLEDKLILLVLDAARVKHPA"
     gene            19795..20568
                     /gene="nudC"
                     /locus_tag="OQQ57_001325"
     CDS             19795..20568
                     /gene="nudC"
                     /locus_tag="OQQ57_001325"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HCS1956154.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVVLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            20608..21672
                     /gene="hemE"
                     /locus_tag="OQQ57_001326"
     CDS             20608..21672
                     /gene="hemE"
                     /locus_tag="OQQ57_001326"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HCS1956155.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            21682..22353
                     /gene="nfi"
                     /locus_tag="OQQ57_001327"
     CDS             21682..22353
                     /gene="nfi"
                     /locus_tag="OQQ57_001327"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HCS1956156.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            22396..22986
                     /locus_tag="OQQ57_001328"
     CDS             22396..22986
                     /locus_tag="OQQ57_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HCS1956157.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVVLSE
                     LVHSRLSGETLEHAVEVSKTSITTVAMLEMTQVGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            23173..23445
                     /gene="hupA"
                     /locus_tag="OQQ57_001329"
     CDS             23173..23445
                     /gene="hupA"
                     /locus_tag="OQQ57_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HCS1956158.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            23458..24153
                     /locus_tag="OQQ57_001330"
     CDS             23458..24153
                     /locus_tag="OQQ57_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HCS1956159.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="OQQ57_001331"
     CDS             complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="OQQ57_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HCS1956160.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW"
     gene            24818..26194
                     /gene="zraS"
                     /locus_tag="OQQ57_001332"
     CDS             24818..26194
                     /gene="zraS"
                     /locus_tag="OQQ57_001332"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HCS1956161.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPEIQADPDRLTQVLLNLYLNAIQAIVQHGVISVTVSESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
                     ITRKDPQG"
     gene            26191..27515
                     /gene="zraR"
                     /locus_tag="OQQ57_001333"
                     /pseudo
     CDS             26191..27515
                     /gene="zraR"
                     /locus_tag="OQQ57_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
     gene            complement(27512..28801)
                     /gene="purD"
                     /locus_tag="OQQ57_001334"
     CDS             complement(27512..28801)
                     /gene="purD"
                     /locus_tag="OQQ57_001334"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HCS1956162.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLLLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(28813..30402)
                     /gene="purH"
                     /locus_tag="OQQ57_001335"
     CDS             complement(28813..30402)
                     /gene="purH"
                     /locus_tag="OQQ57_001335"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HCS1956163.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTQRQPTEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         7315 a         7971 c         8420 g         7164 t
ORIGIN      
        1 gcaaaagttc tgagctaatt gccgataaca tttgactcaa tgcgcactaa aagggcatca
       61 tttgatgccc tttttgcacg ctttcgtacc agaacctggc tcatcagtga ttttctttgt
      121 cataatcatt gctgagacag gctctgttga gggcgtataa tccgaaaagc taatacgcgt
      181 ttcgatttgg tttgcctcgc gatcgcgggg tgaaaatgtt tgtagaaaac ttctgacagg
      241 ttggtttatg agtgcgaata ccgaagctca aggaagcggg cgcggcctgg aagcgatgaa
      301 gtgggtcgtt gtggtggcat tgctcttggt ggcgattgtc ggcaactacc tttatcgcga
      361 cattatgctg ccgctgcgtg cgctggccgt agtaattctg attgctgcag cgggtggtgt
      421 cgcgctgtta acgacaaaag gtaaagctac cgttgctttt gcccgtgaag cgcgtaccga
      481 agtccgtaag gtcatttggc cgactcgcca ggaaacattg cacaccacgc tgattgtggc
      541 tgcggttacc gcagtaatgt cactgatcct gtggggactg gatggtattc tggttcgcct
      601 ggtatccttt atcactggcc tgaggttctg agatgtctga agctcctaaa aagcgctggt
      661 acgtcgttca ggcgttttcc ggttttgaag gccgcgtagc aacgtcgctg cgtgagcata
      721 tcaaattaca caacatggaa gatttgtttg gtgaagtcat ggtaccaacc gaagaagtgg
      781 ttgaaatccg tggcggtcag cgtcgcaaaa gcgaacgtaa attcttccct ggctacgtcc
      841 tcgttcagat ggtgatgaac gacgcgagct ggcacctggt gcgcagcgta ccgcgagtga
      901 tgggcttcat cggcggtact tccgatcgtc ctgcgccaat cagcgataaa gaagtcgatg
      961 cgattatgaa ccgcctgcag caggttggtg ataagccgcg tccgaaaacg ctgtttgaac
     1021 cgggtgaaat ggtccgtgtt aatgatggtc cgttcgctga cttcaacggt gttgttgaag
     1081 aagtggatta cgagaaatct cgtctgaaag tgtctgtttc tatcttcggt cgtgcgaccc
     1141 cggtagagct ggacttcagc caggttgaaa aagcctaacc cagcgatcaa aaaagcggcg
     1201 atttaatcgt tgcacaaggc gcgagattgg aatacaattt cgcgcctttt atttttatgg
     1261 gccttgcccg taaaaacgat tttttatatc acggggagcc tctcagaggc gttattaccc
     1321 aacttgagga atttataatg gctaagaaag tacaagccta tgtcaagctg caggttgcag
     1381 ctggtatggc taacccgagt ccgccagtag gtccggctct gggtcagcag ggcgtaaaca
     1441 tcatggaatt ctgcaaagcg ttcaacgcaa aaactgattc catcgaaaaa ggtctgccga
     1501 ttccggtagt aatcaccgtt tacgctgacc gttctttcac tttcgttacc aagaccccgc
     1561 cggcagcagt tctgctgaaa aaagcggctg gtatcaagtc tggtgccggt aagccgaaca
     1621 aagacaaagt gggtaaaatt tcccgcgctc agctgcagga aatcgcgcag accaaagctg
     1681 ccgacatgac tggtgccgac attgaagcga tgactcgctc catcgaaggt actgcacgtt
     1741 ccatgggcct ggtagtggag gactaagaaa tggctaaact gaccaagcgc atgcgtgtta
     1801 tccgcgagaa agttgatgca accaaacagt acgacatcaa cgaagctatc gcactgctga
     1861 aagagctggc gactgctaaa ttcgtagaaa gcgtggacgt agctgttaac ctcggcatcg
     1921 acgctcgtaa atctgaccag aacgtacgtg gtgcaactgt actgccgcac ggtactggcc
     1981 gttccgttcg cgtagccgta tttacccaag gtgcaaacgc tgaagctgct aaagctgcag
     2041 gcgcagaact ggtaggtatg gaagatctgg ctgaccagat caagaaaggc gaaatgaact
     2101 ttgacgttgt tattgcttct ccggatgcaa tgcgcgttgt tggccagctg ggccaggttc
     2161 tgggtccgcg cggcctgatg ccaaacccga aagtgggtac tgtaacaccg aacgttgctg
     2221 aagcggttaa aaacgctaaa gctggccagg ttcgttaccg taacgacaaa aacggcatca
     2281 tccacaccac catcggtaaa gtggactttg acgctgacaa actgaaagaa aacctggaag
     2341 ctctgctggt tgcgctgaaa aaagcaaaac cgactcaggc gaaaggcgtg tacatcaaga
     2401 aagttagcat ctccaccacc atgggtgcag gtgttgcagt tgaccaggct ggcctgagcg
     2461 cttctgtaaa ctaatgcctt tacgtgggcg gtgattttgt ctacaatctt acccccacgt
     2521 ataatgctta atgcagacgt atatccgaga tattcgggtt gtggcaaggc ggcaactgag
     2581 tgagtcgcca agagcatagc taactatgtg actggtgcga atgaaggaag ccaacgccgc
     2641 cacaagttga atagcgacgg atagaaaaga tttgttcgtt ggagcttggc ctatccaggc
     2701 ctccgtcgaa gaccgcagga gtttcgcaag aaacttaatc ccctgcgtag acggtgacag
     2761 aacgctaaga ttattctttt atattctggc ttgtttctgc tcaccgtaat taagacgctc
     2821 tctccgtttg gaggagtgaa gtgagttcca gagattttct ctggcaaaca tccaggagca
     2881 aagctaatgg ctttaaatct tcaagacaaa caagcgattg ttgctgaagt cagcgaagta
     2941 gccaaaggcg cgctgtctgc agtagttgcg gattcccgtg gcgtaactgt agataaaatg
     3001 actgaactgc gtaaagcagg tcgcgaagct ggcgtataca tgcgtgttgt tcgtaacacc
     3061 ctgctgcgcc gtgctgttga aggtactccg ttcgagtgcc tgaaagacgc gtttgttggt
     3121 ccgaccctga ttgcatactc tatggaacac ccgggcgctg ctgctcgtct gttcaaagag
     3181 ttcgcgaaag cgaatgcaaa atttgaggtc aaagccgctg cctttgaagg tgagctgatc
     3241 ccggcgtctc agatcgaccg cctggcaact ctgccgacct acgaagaagc aattgcacgc
     3301 ctgatggcaa ccatgaaaga agcttcggct ggcaaactgg ttcgtactct ggctgctgta
     3361 cgcgatgcga aagaagctgc ttaatcgcag ttatcttttt aacgcattcg cttacgtata
     3421 aacttattct gatattcagg aacaatttaa atgtctatca ctaaagatca aatcattgaa
     3481 gcagttgcag ctatgtctgt aatggacgtt gtagaactga tctctgcaat ggaagaaaaa
     3541 ttcggtgttt ccgctgctgc tgctgtagct gtagctgctg gcccggttga agctgctgaa
     3601 gaaaaaactg aattcgacgt aattctgaaa gctgctggcg ctaacaaagt tgctgttatc
     3661 aaagcagtac gtggcgcaac tggcctgggt ctgaaagaag ctaaagacct ggtagaatct
     3721 gcaccggctg ctctgaaaga aggcgtgagc aaagacgacg cagaagcact gaaaaaagct
     3781 ctggaagaag ctggcgctga agttgaagtt aaataagcca acccttccgg ttgcagcctg
     3841 agaaatcagg ctgatggctg gtgacttttt agtcaccagc ctttttgcgc tgtaaggcgc
     3901 cagtagcgtt tcacactgtt tgactactgc tgtgcctttc aatgcttgtt tctatcgacg
     3961 acttaatata ctgcgacagg acgtccgttc tgtgtaaatc gcaatgaaat ggtttaagcg
     4021 tgatagcaac aggcattgcg gaaagtgttc cattttccgg tcaacaaaat agtgttgcac
     4081 aaactgtccg ctcaatggac agatgggtcg acttgtcagc gagctgagga accctatggt
     4141 ttactcctat accgagaaaa aacgtattcg taaggatttt ggtaaacgtc cacaagttct
     4201 ggatgtacct tatctccttt ctatccagct tgactcgttt cagaaattta tcgagcaaga
     4261 tcctgaaggg cagtatggtc tggaagcagc tttccgttcc gtattcccga ttcagagcta
     4321 cagcggtaat tccgagctgc aatacgtcag ctaccgcctt ggcgaaccgg tgtttgacgt
     4381 ccaggaatgt caaatccgtg gcgtgaccta ttccgcaccg ctgcgcgtta aactgcgtct
     4441 ggtgatctat gagcgcgaag cgccggaagg caccgtaaaa gacattaaag aacaagaagt
     4501 ctacatgggc gaaattccgc tcatgacaga caacggtacc tttgttatca acggtactga
     4561 gcgtgttatc gtttcccagc tgcaccgtag tccgggcgtc ttctttgact ccgacaaagg
     4621 taaaacccac tcttcgggta aagtgctgta taacgcgcgc atcatccctt accgtggttc
     4681 ctggctggac ttcgaattcg atccgaagga caacctgttc gtacgtatcg accgtcgccg
     4741 taaactgcct gcgaccatca ttctgcgcgc cctgaactac accacagagc agatcctcga
     4801 cctgttcttt gaaaaagtta tctttgaaat ccgtgataac aagctgcaga tggaactggt
     4861 gccggaacgc ctgcgtggtg aaaccgcatc ttttgacatc gaagctaacg gtaaagtgta
     4921 cgtagaaaaa ggccgccgta tcactgcgcg ccacattcgc cagctggaaa aagacgacgt
     4981 caaacttatc gaagtcccgg ttgagtacat cgcaggtaaa gtggttgcta aagactatat
     5041 tgatgagtct accggcgagc tgatctgcgc agcgaacatg gagctgagcc tggatctgct
     5101 ggctaagctg agccagtctg gtcacaagcg tatcgaaacg ctgttcacca acgatctgga
     5161 tcacggccca tatatctctg aaaccttacg tgtcgaccca actaacgacc gtctgagcgc
     5221 actggtagaa atctaccgca tgatgcgccc tggcgagccg ccgactcgtg aagcagctga
     5281 aagcctgttc gagaacctgt tcttctccga agaccgttat gacttgtctg cggttggtcg
     5341 tatgaagttc aaccgttctc tgctgcgcga agaaatcgaa ggttccggta tcctgagcaa
     5401 agacgacatc attgatgtta tgaaaaagct catcgatatc cgtaacggta aaggcgaagt
     5461 cgatgatatc gaccacctcg gcaaccgtcg tatccgttcc gttggcgaaa tggcggaaaa
     5521 ccagttccgc gttggcttgg tacgtgtaga gcgtgcggtg aaagagcgtc tgtctctggg
     5581 cgatctggat accctgatgc ctcaggatat gatcaacgcc aagccgattt ccgcagcagt
     5641 gaaagagttc ttcggttcca gccagctgtc tcagtttatg gaccagaaca acccgctgtc
     5701 tgagattacg cacaaacgtc gtatctccgc actcggccca ggcggtctga cccgtgaacg
     5761 tgcaggcttc gaagttcgag acgtacaccc gactcactac ggtcgcgtat gtccaatcga
     5821 aacccctgaa ggtccgaaca tcggtctgat caactctctg tccgtgtacg cacagactaa
     5881 cgaatacggc ttccttgaga ctccgtatcg taaagtgacc gacggtgttg taactgacga
     5941 aattcactac ctgtctgcta tcgaagaagg caactacgtt atcgcccagg cgaactccaa
     6001 cttggatgaa gaaggccact tcgtagaaga cctggtaact tgccgtagca aaggcgaatc
     6061 cagcttgttc agccgcgacc aggttgacta catggacgta tccacccagc aggtggtatc
     6121 cgtcggtgcg tccctgatcc cgttcctgga acacgatgac gccaaccgtg cattgatggg
     6181 tgcgaacatg caacgtcagg ccgttccgac tctgcgcgct gataagccgc tggttggtac
     6241 tggtatggaa cgtgctgttg ccgttgactc cggtgtaact gcggtagcta aacgtggtgg
     6301 tgtcgttcag tacgtggatg cttcccgtat cgttatcaaa gttaacgaag acgagatgta
     6361 tccgggtgaa gcaggtatcg acatctacaa cctgaccaaa tacacccgtt ctaaccagaa
     6421 cacctgtatc aaccagatgc cgtgtgtgtc tctgggtgaa ccggttgaac gtggcgacgt
     6481 gctggcagac ggtccgtcca ccgacctcgg tgaactggcg cttggtcaga acatgcgcgt
     6541 agcgttcatg ccgtggaatg gttacaactt cgaagactcc atcctcgtat ccgagcgtgt
     6601 tgttcaggaa gaccgtttca ccaccatcca cattcaggaa ctggcgtgtg tgtcccgtga
     6661 caccaagctg gggccggaag agatcaccgc tgacatcccg aacgtgggtg aagctgcgct
     6721 ctccaaacta gatgaatccg gtatcgttta cattggtgcg gaagtgaccg gtggcgacat
     6781 tctggttggt aaggtaacgc cgaaaggtga aactcagctg accccagaag aaaaactgct
     6841 gcgtgcgatc ttcggtgaga aagcctctga cgttaaagac tcttctctgc gcgtaccaaa
     6901 cggtgtatcc ggtacggtta tcgacgttca ggtctttact cgcgatggcg tagaaaaaga
     6961 caaacgtgcg ctggaaatcg aagaaatgca gctcaaacag gcgaagaaag acctgtctga
     7021 agaactgcag atcctcgaag cgggtctgtt cagccgtatc cgtgctgtgc tggtagccgg
     7081 tggcgttgaa gctgagaagc tcgacaaact gccgcgcgat cgctggctgg agctgggcct
     7141 gacagacgaa gagaaacaaa atcagctgga acagctggct gagcagtatg acgaactgaa
     7201 acacgagttc gagaagaaac tcgaagcgaa acgccgcaaa atcacccagg gcgacgatct
     7261 ggcaccgggc gtgctgaaga ttgttaaggt atatctggcg gttaaacgcc gtatccagcc
     7321 tggtgacaag atggcaggtc gtcacggtaa caagggtgta atttctaaga tcaacccgat
     7381 cgaagatatg ccttacgatg aaaacggtac gccggtagac atcgtactga acccgctggg
     7441 cgtaccgtct cgtatgaaca tcggtcagat cctcgaaacc cacctgggta tggctgcgaa
     7501 aggtatcggc gacaagatca acgccatgct gaaacagcag caagaagtcg cgaaactgcg
     7561 cgaattcatc cagcgtgcgt acgatctggg cgctgacgtt cgtcagaaag ttgacctgag
     7621 taccttcagc gatgaagaag ttatgcgtct ggctgaaaac ctgcgcaaag gtatgccaat
     7681 cgcaacgccg gtgttcgacg gtgcgaaaga agcagaaatt aaagagctgc tgaaacttgg
     7741 cgacctgccg acttccggtc agatccgcct gtacgatggt cgcactggtg aacagttcga
     7801 gcgtccggta accgttggtt acatgtacat gctgaaactg aaccacctgg tcgacgacaa
     7861 gatgcacgcg cgttccaccg gttcttacag cctggttact cagcagccgc tgggtggtaa
     7921 ggcacagttc ggtggtcagc gtttcgggga gatggaagtg tgggcgctgg aagcatacgg
     7981 cgcagcatac accctgcagg aaatgctcac cgttaagtct gatgacgtga acggtcgtac
     8041 caagatgtat aaaaacatcg tggacggcaa ccatcagatg gagccgggca tgccagaatc
     8101 cttcaacgta ttgttgaaag agattcgttc gctgggtatc aacatcgaac tggaagacga
     8161 gtaattctcg ctcaaacagg tcactgctgt cgggttaaaa cccggcagcg gattgtgcta
     8221 actccgacgg gagcaaatcc gtgaaagatt tattaaagtt tctgaaagcg cagactaaaa
     8281 ccgaagagtt tgatgcgatc aaaattgctc tggcttcgcc agacatgatc cgttcatggt
     8341 ctttcggtga agttaaaaag ccggaaacca tcaactaccg tacgttcaaa ccagaacgtg
     8401 acggcctttt ctgcgcccgt atctttgggc cggtaaaaga ttacgagtgc ctgtgcggta
     8461 agtacaagcg cctgaaacac cgtggcgtca tctgtgagaa gtgcggcgtt gaagtgaccc
     8521 agactaaagt acgccgtgag cgtatgggcc acatcgaact ggcttccccg actgcgcaca
     8581 tctggttcct gaaatcgctg ccgtcccgta tcggtctgct gctcgatatg ccgctgcgcg
     8641 atatcgaacg cgtactgtac tttgaatcct atgtggttat cgaaggcggt atgaccaacc
     8701 tggaacgtca gcagatgctg actgaagagc agtatctgga cgcgctggaa gagttcggtg
     8761 acgaattcga cgcgaagatg ggtgcggaag caatccaggc tctgctgaag agcatggatc
     8821 tggagcaaga gtgcgaacag ctgcgcgaag agctgaacga aaccaactcc gaaaccaagc
     8881 gtaaaaagct gaccaagcgt atcaaactgc tggaagcgtt cgttcagtct ggtaacaaac
     8941 cagagtggat gatcctgacc gttctgccgg tactgccgcc agatctgcgt ccgctggttc
     9001 cgctggatgg tggtcgtttc gcgacttctg acctgaacga tctgtatcgt cgcgtcatta
     9061 accgtaacaa ccgtctgaaa cgtctgctgg atctggctgc gccggacatc atcgtacgta
     9121 acgaaaaacg tatgctgcag gaagcggtag acgccctgct ggataacggt cgtcgcggtc
     9181 gtgcgatcac cggttctaac aagcgtcctc tgaaatcttt ggccgacatg atcaaaggta
     9241 aacagggtcg tttccgtcag aacctgctcg gtaagcgtgt tgactactcc ggtcgttctg
     9301 taatcaccgt aggtccatac ctgcgtctgc atcagtgcgg tctgccgaag aaaatggcgc
     9361 tggagctgtt caaaccgttc atctacggca agctggaact gcgtggtctt gctaccacca
     9421 ttaaagctgc gaagaaaatg gttgagcgcg aagaagctgt cgtttgggat atcctggacg
     9481 aagttatccg cgaacacccg gtactgctga accgtgcacc gactctgcac cgtctgggta
     9541 tccaggcatt tgaaccggta ctgatcgaag gtaaagctat ccagctgcac ccgctggttt
     9601 gtgcggcata taacgccgac ttcgatggtg accagatggc tgttcacgta ccgctgacgc
     9661 tggaagccca gctggaagcg cgtgcgctga tgatgtctac caacaacatc ctgtccccgg
     9721 cgaacggcga accaatcatc gttccgtctc aggacgttgt tctgggtctg tactatatga
     9781 cccgtgactg tgttaacgcc aaaggcgaag gcatggtgct gactggcccg aaagaagcag
     9841 aacgtctgta tcgctctggt ctggcttctc tgcatgcgcg cgttaaagtg cgtatcaccg
     9901 agtatgaaaa agatgcaaac ggtgaattag tagcgaaaac cagcctgaaa gacacgactg
     9961 ttggccgtgc cattctgtgg atgattgtac cgaaaggtct gccttactcc atcgtcaacc
    10021 aggcgctggg taaaaaagca atctccaaaa tgctgaacac ctgctaccgc attctcggtc
    10081 tgaaaccgac cgttattttt gcggaccaga tcatgtacac cggcttcgcc tatgcagcgc
    10141 gttctggtgc atctgttggc atcgatgaca tggtcatccc ggagaagaaa cacgaaatca
    10201 tctccgaggc agaagcagaa gttgctgaaa ttcaggagca gttccagtct ggtctggtaa
    10261 ctgcgggcga acgctacaac aaagttatcg atatctgggc tgcggcgaac gatcgtgtat
    10321 ccaaagcgat gatggataac ctgcaaactg aaaccgtgat taaccgtgac ggtcaggaag
    10381 agaagcaggt ttccttcaac agcatctaca tgatggccga ctccggtgcg cgtggttctg
    10441 cggcacagat tcgtcagctt gctggtatgc gtggtctgat ggcgaagccg gatggctcca
    10501 tcatcgaaac gccaatcacc gcgaacttcc gtgaaggtct gaacgtactc cagtacttca
    10561 tctccaccca cggtgctcgt aaaggtctgg cggataccgc actgaaaact gcaaactccg
    10621 gttacctgac tcgtcgtctg gttgacgtgg cgcaggacct ggtggttacc gaagacgatt
    10681 gtggtaccca tgaaggtatc atgatgactc cggttatcga aggtggtgat gttaaagagc
    10741 cgctgcgcga tcgcgtactg ggtcgtgtaa ctgctgaaga cgttctgaag ccgggtactg
    10801 ctgatatcct cgttccgcgc aacacgctgc tgcacgaaca gtggtgtgac ctgctggaag
    10861 agaactctgt cgacgcggtt aaagtacgtt ctgttgtatc ttgtgacacc gactttggtg
    10921 tatgtgcgca ctgctacggt cgtgacctgg cgcgtggcca catcatcaac aagggtgaag
    10981 caatcggtgt tatcgcggca cagtccatcg gtgaaccggg tacacagctg accatgcgta
    11041 cgttccacat cggtggtgcg gcatctcgtg cggctgctga atccagcatc caggtgaaaa
    11101 acaaaggtag catcaagctc agcaacgtga agtcggttgt gaactccagc ggtaaactgg
    11161 ttatcacttc ccgtaatact gaactgaaac tgatcgacga attcggtcgt accaaagaaa
    11221 gctacaaagt accttacggt gcggtactgg cgaaaggcga tggcgaacag gttgctggcg
    11281 gcgaaaccgt tgcaaactgg gacccgcaca ccatgccggt tatcaccgaa gtaagcggtt
    11341 ttgtacgctt tactgacatg atcgacggtc agaccattac tcgtcagaca gacgaattga
    11401 ccggtctgtc ttcgctggtg gttctggatt ccgcagaacg taccgcaggt ggtaaagatc
    11461 tgcgtccggc actgaaaatc gttgatgctc agggtaacga cgttctgatt ccgggtaccg
    11521 atatgcctgc gcagtacttc ctgccgggta aagcgattgt tcagctggaa gatggcgtac
    11581 agatcagctc tggtgacacc ctggcgcgta ttccgcagga atccggcggt accaaggaca
    11641 tcaccggtgg tctgccgcgc gttgcggacc tgttcgaagc acgtcgtccg aaagagccgg
    11701 caatcctggc tgaaatcagc ggtatcgttt ccttcggtaa agaaaccaaa ggtaaacgtc
    11761 gtcttgttat caccccggta gacggtagcg atccgtacga agagatgatt ccgaaatggc
    11821 gtcagctcaa cgtgttcgaa ggtgaacgtg tagaacgtgg tgacgtaatt tccgacggtc
    11881 cggaagcgcc gcacgacatt ctgcgtctgc gtggtgttca tgctgttact cgttacatcg
    11941 ttaacgaagt acaggacgta taccgtctgc agggcgttaa gattaacgat aaacacatcg
    12001 aagttatcgt tcgtcagatg ctgcgtaaag ctaccatcgt taacgcgggc agctccgact
    12061 tcctggaagg cgaacaggtt gaatactctc gcgtcaagat cgcaaaccgc gaactggaag
    12121 cgaacggcaa agtgggtgca acttactccc gcgatctgct gggtatcacc aaagcgtctc
    12181 tggcaaccga gtccttcatc tccgcggcat cgttccagga gaccactcgc gtgctgaccg
    12241 aagcagccgt tgcgggcaaa cgcgacgaac tgcgcggcct gaaagagaac gttatcgtgg
    12301 gtcgtctgat cccggcaggt accggttacg cgtaccacca ggatcgtatg cgtcgccgtg
    12361 ctgcgggtga agctccggct gcaccgcagg tgactgcaga agacgcatct gccagcctgg
    12421 cagaactgct gaacgcaggt ctgggcggtt ctgataacga gtaatcgtta atccgcaaat
    12481 aacgtaaaaa cccgcttcgg cgggtttttt tatgggggga gtttagggaa agagcatttg
    12541 tcagaatatt taaggaattt ctgaatactc ataatcaatg tagagatgac taatatcctg
    12601 aaactgactg aactaattga gtcaaactcg gcaaggattc gatactattc ctgtgtaact
    12661 ttcttaagga acgagaatga aacaggaagt ggaaaagtgg cgaccttttg gacatccgga
    12721 tggtgatatt cgtgatttat catttcttga tgctcatcag gctgtctacg ttcagcatca
    12781 tgagggcaaa gagcctttag agtatcgctt ttgggttacc tactctcttc actgcttcac
    12841 aaaagattat gaacatcaga cgaacgaaga aaaacaatcg ttaatgtacc acgcgcctaa
    12901 agaatctcgt cccttctgcc agcaccgtta taacttagcg cgcacacact taaaaagaac
    12961 tattttggcg ctgccagaaa gcaacgttat tcatgccggg tatggtagct atgccgtgat
    13021 tgaggtggac ttagacggag gagataaggc attttacttt gttgcgttca gggctttcag
    13081 ggaaaagaaa aaactccgtt tgcatgtaac tagcgcttat cccatttctg aaaaacagaa
    13141 aggtaaatca gtgaaatttt tcaccattgc ctacaactta ttgagaaata agcagcttcc
    13201 tcagccctca aaataacaaa acccacctta aggtgggttt cgccagagaa ttatctctgg
    13261 tattcagaac gccattaccg gactttgcct tgaccttgcg ataatcgcag gttgcgggat
    13321 gtctgaattt cttcagtctg ctgcatcctg gaagatgaga acatgtgttc ttattttcgt
    13381 ctctatcata gttgagtatt tactctctta caatcagatc tctttcattg ctcaacaggc
    13441 gatggcttca gactttgcat tacggaattt ttaagaaagg cagggcgaaa cgaggaagaa
    13501 gcttttcgcc ctggacaaca ttcctgctga cggcactacc ataaaaaaac acaacgcttt
    13561 caacaacctt gcgtttttca tcttccgtag cggctcggaa taaatttacg ttcttacatt
    13621 ccgtctcata gtctttgcga ggcccgtccc agatagctgt cccagtcttt ccataccggc
    13681 tgcaaaccct gagcggttaa cgcggcagca accgcttccg gtctgcgatc gtcgtgcggt
    13741 gagaactgtt ccaactcggg gtgattatcg gcatagccac ctggctgcgt tttcgagaag
    13801 gcgctgacgt tattgatcgc cagcggaata acgcgatcgc gaaaccacgg tgattcccgc
    13861 gtggagagtg acagttcaat ctccggtgca agcagtcgga aggcgcagat ggtttgcact
    13921 aactggcgtt catccataat cgacgcaggc tcaatgccgc cagtacacgg gcgcaggcgc
    13981 ggaaaggaga cagagtaacg gctttgccag taatgctgtt gcagccatag caaatgttcg
    14041 gcaaccatat agcagtcaac gcgccagttg tcggaaaggc caattagcgc gccgaggcct
    14101 atcttatcaa tccccgcacg ccccagccga tccggcgttt ccagccgcca gaagaagtcc
    14161 tgttttttgc ctttcagatg atggcgggca taagtcgcct cgtgatatgt ctcctgataa
    14221 accatcacgc catccagacc aagctgcttt aactcggcgt attccgtctt cgccagcggt
    14281 tgcacttcca tttgtagtga agagaactgt tcacgcaggg cggggagatg acgacgaaag
    14341 taatccatcc ccactttcgc ctgatgttca ccagtgacta atagcagatg ttcaaagccc
    14401 atctcccgta tagcggcgct ttccctggca atatccgctt catccagcgt tttgcgcttg
    14461 atgcgattac tcatggaaaa tccgcagtac gtgcagtcgt tagcgcaaag attggaaaga
    14521 taaagcggga cgtagaaact aactgtgttg ccaaatcgct gacgggtcag acgctgcgcc
    14581 cgttgggcca gttgttccag atagccactg gcggctggcg ataacagcgc catcatatcg
    14641 tcgcgggtga attgcgaggc atttagcgcc cgctctacgt caacagccgt tttgccgttg
    14701 atacgcaggc ggatgtcatc ccagtccagt tgtcgccagc gatcgctgaa ggttttcatg
    14761 ccgatgcctc cagaaatcca gtcagcgggc tggtggcatg agcaaaatga ctgcggctgc
    14821 ccggtccgga ctgacgtgcc agcaggcctg cttctaccgc cagacgaaat gccttcgcca
    14881 tgttgacggg atcgtccgct acggcaatcg ccgtattcac taacaccgcg tcggccccca
    14941 tttccagggc ctgcgctgca tggctgggaa cgccgatgcc agcatcgaca accaccggaa
    15001 ctgtggcctg ctggataata atctccagca tggcacgggt ttccagtccc tgattcgagc
    15061 caatcggcgc gccgagcggc atcaccgctg cacagccgac ttcttccaga cgtttacaca
    15121 ataccggatc ggccccgcag taaggcagca cgacaaatcc ctgttgtacc agcatttcgg
    15181 cggctttcag agtttcgatg ggatcgggca acagccagcg ggcgtcaggg tgaatctcta
    15241 attttaacca gtttgtgcct aacgcttcac gtgccagatg ggcggcgaaa atggcttctt
    15301 ccgctgtttt cgccccggaa gtatttggca gcagggtcac acccgccgcg ataagcggtt
    15361 cgaggatagc gtcgttgtgc tggcgcaagt cgacacgttt catcgccagt gtcaccagct
    15421 ggctgccgga agcgcggatc gcctccacca tcagttgtga agaagcgaat ttccctgtgc
    15481 cggtaaacag atgtgaatca aacgttttgt ccgcaatacg taacatctca accccctgca
    15541 ataacctgaa aaagcaggat ctggtcgcca tcctgcagga tatgttgcgt ccactgctca
    15601 cgcgggacga tttgctgatt aatcgccaga gccgcgcccg cttgtcgttg gtcgagttgc
    15661 tccagtagtt cgtgaacagt ttgcccggtg gcgcactgca tcggttgatc gttaaacagg
    15721 atctgcattg cttcctccgc ataccgggca accactggcg cggcgcaacg ccaggctgcg
    15781 ccactggctc gatttaccgt cgaacagtcg gagttctccc gcaggtgtct ctataccgct
    15841 taataactta atggcttcca gtgcctgcaa agtgcccata accccgacca ccgggccaac
    15901 cacgcccgcc gtgcggcagt tgcgttctgg ctcctggtta tctggccaca ggcagcggta
    15961 acacccctgc tcccagggcg gcgtcagtac catcaactga ccgccaaatc cgaccgcgct
    16021 ggcggtgata agcggcgtgt tgagtaccac gcaggcggca ttaatctcct ggcgagtcgc
    16081 catattgtcg gtacagtcga gcaccacatc ggcccgtgca accgcatctt ttaacgcctc
    16141 acccgttaac cgttgttgta atgctgtcag ttgaatgtcg ggattcaact gtgtcagtcg
    16201 ctgttggctg acctgcgatt tcgggctgtt gatatcttca gtggtaaaga gaatttgtcg
    16261 ttacagattg cttaaatgca catcgtcgtc atctgccagt accagcgtcc cgacgccagc
    16321 gcccgccagg tatagcgcag caggtgtacc cagcccgcca agaccgataa tcagcacctg
    16381 gctgtcgagc agtttttgct gcccgtcaag agcgatatca tcgagcagga tttggcggct
    16441 ataacgcata aaatcacggt cattcatcgc caactcctgc aatttccagc aactgtgccg
    16501 ttgccaaacg ccagtctgcg gcttgagtaa tggcgctgat gacggcgata ctgccgacac
    16561 ccgttgctat caccgcaggc gcgcgtgcca gactgatacc gccaatcgcc acggtgggat
    16621 aatccgccag tcgctcaaca tgccgtgcca gctgttccag cccctgcggt gcagaaggca
    16681 tctgtttggt ttgcgtcggg aacacatgtc ccagcgcgat ataagagggg cgtgctgcca
    16741 gcgcgacgtc gatttccata tcgtcatgtg tcgaaacacc cagccgcagg cctgccgcgc
    16801 ggatggcatt gagatcggtg gcttgcaaat cttcctgccc caaatggacg ccatacgcct
    16861 gatgcttgat cgcgagccgc cagtaatcgt tgataaacaa tcgcgcgtta tagcggcggc
    16921 ccagcgcaat tgccgccacg acatcggctt ccacctcttc atcgcgccga tctttgatgc
    16981 gtagctggag agtacgtacg cctgcatcca acagacgttc gatccactgt acgctgtcca
    17041 ccactgggta cagtcctaaa cgaaaaggta caggaggaaa atcaggctga tacatcacgc
    17101 ttcctcctta cgcaggtaga tttctccgcc tctggcacgg aagttctccg acatatccgc
    17161 cattcccatt tcaatagttt gcgtggcggc gtaatcacgc acttcctggc tgattttcat
    17221 cgagcagaat ttcggcccac acatggagca aaaatgggcg actttacctg actcttgcgg
    17281 cagggtttca tcgtgataag cgcgggcggt aaacgggtcg agggccagat taaactggtc
    17341 ttcccagcga aattcgaagc gggctttcga catggcgtta tcgcgaattt gcgcgcccgg
    17401 atgccctttc gccaggtcag cggcgtgggc ggcaatctta taggtgataa gcccctgctt
    17461 aacatcttct ttattaggca gacccagatg ctcttttggt gttacgtaac agagcatcgc
    17521 gcagccaaac cagccaatca tcgccgcacc aatccccgac gtgaagtggt catagcccgg
    17581 cgcaatatcg gtagttagcg gccccagagt gtaaaacggc gcttcgtggc agtgctctaa
    17641 ctcctcggtc atattgcggc ggatcatctg catcggcacg tggcctgggc cttcaatcat
    17701 cacctgcacg tcatattccc aggcaatttt ggtcagttcg cccagcgtat gcagctcggc
    17761 aaactgcgct tcatcgttgg cgtcctgaat agaaccgggg cgcagaccgt cgcccagcga
    17821 cagcgaaacg tcataagcgg cacagatttc acaaatttcg cggaagtgtt gatagaggaa
    17881 attttcctga tgatgggaga ggcaccattt cgccataatc gaaccgccgc gagagacgat
    17941 accggtcagg cgtttcgcgg tcatcggcac atagcgcaac agtacgcccg catggatagt
    18001 gaagtaatcc acaccttgct cggcctgttc cagcagcgtg tcgcggaacg cttcccaggt
    18061 aagatcttcg gcgatcccgt taaccttctc cagcgcctgg tagatcggca ctgtaccgat
    18121 cggcaccgga ctgttacgca aaatccactc gcgggtttcg tgaatatagc gaccggtgga
    18181 gagatccatc accgtatccg ctccccagcg cgtggaccat accagctttt ccacttcttc
    18241 ttcgatggaa gaggtgaccg ccgagttgcc gatattggcg ttaactttta ccaggaagtt
    18301 acggccaata atcatcggct ccgattccgg atgattaatg ttggccggga taatcgcacg
    18361 tccggcagca acttcatcac ggacaaattc cgcagtgata ttttccggca gacgtgcgcc
    18421 aaagctcatt cccggatgct ggtggcgtaa aacttcgcta cgtatgcgct cgcggcccat
    18481 attctcgcgg atggcgatga attccatttc cggagtgatg atgccctggc gggcgtagtg
    18541 cagttgggtg acacggcgtc ctgctttggc gcgttttggt gttagtacgc cgctaaaacg
    18601 cagttcgtcg aggccatcat ctgccagccg cgctttagtg taatcggaac tgcgcacggt
    18661 aagttcttcg gtatcgccgc gcgcatcgat ccacggctgg cgtagttttg ccagcccttg
    18721 ctgcacgtta atggcgatct gcggatcgcc atatgggccg gaggtgtcgt agaccggaat
    18781 cgcttcgttt tcttcaaact gcggctgttc tttgctgccg ccgattagcg tcgggctaag
    18841 ctggatctca cgcatcggca cgcgaacgcc agagtgtgtg ccagtgaggt aaatgcgttt
    18901 tgagttggga aaggcggtgc cttccagggt gtcgataaaa tgttgggccc gggcgcgttg
    18961 ttcgcggcgg gtcagttttg ttgcagacat agctcattcc aaaaagttaa ggacgtggct
    19021 tgtcagacga cggatgaagc aagagacgat cgccgcaaag gcgatgcgat agcagattaa
    19081 ctcttgttcc cttcgcaggt attagcctga tcaggttccg cggatcccga ataaacggtc
    19141 tcagccagtt aaggcactcc gacaagaaat tagcccccac aaacggggcg ttgaatgtaa
    19201 attacgcgtt aacagcgcag aactcaagca ggatgtttga cgcgggcggc gtcaagcacc
    19261 agcagaatca gcttatcttc cagcacaaag cgcgcttcca gcgcctcgcc gatgtcagat
    19321 aaaacctttt gaaactcaag gtaattatca tgatcgatgg cggtttccag gctggaatcg
    19381 tagtaatcca taatctgttg ggtattggct tcgagttgcg gccaaatctt cgcggcgcgc
    19441 gcgagttgcc cgttgccttc cagcttatga agaatgcgct cataaatact gaaatgtccg
    19501 gcagacaagt aatcgaccag gctctgacaa aaatcatcaa gggctttttc gtttagcctc
    19561 atgtacgatt ctttgccagg cttaatgcca accagattgt agtaagccac gagcagatgc
    19621 ttacgtacat gtagccagcg atcaaccagt ttgttacttc ctctgacgcg ctccgtcagg
    19681 ttatcgagct ggttaagcat gattgactcc gcaagtttgt attcaaaaac tgctcagtga
    19741 gaaatgtaaa aaccatgtta aacatgccag tgatgcaaag gtagtgcaag agctatggat
    19801 cgtataattg aaaaattaga tcacggctgg tgggtcgtca gccatgaaca aaaattatgg
    19861 ttaccgaagg gagaattgcc atatggcgaa gcggcaaatt tcgatcttgt gggtcagcgc
    19921 gcactacaaa tcggcgaatg gcagggggaa cctgtttggt tagtacaaca gcagcggcgt
    19981 cacgatatgg ggtcggtacg tcaggtcatt gatctcgatg ttgtgctgtt tcaactggcc
    20041 ggacgaggcg tacaactggc ggagttttac cgatcgcata aatactgtgg ttactgcggg
    20101 catgaaatgt atccgagcaa aaccgaatgg gcgatgctgt gcagccattg ccgtgagcgt
    20161 tactacccgc aaatcgcccc ctgcattatt gttgccatcc gtcgcgatga ttcgatcctc
    20221 ctcgcccagc atacccgcca tcgtaacggt gtccatacag tacttgccgg attcgtcgaa
    20281 gtgggcgaaa ccctcgagca ggcagtcgcg cgggaagtga tggaagagag cggaattaaa
    20341 gttaaaaact tgcgttacgt gacttctcag ccgtggccgt ttcctcagtc tttaatgacc
    20401 gcgtttatgg cggaatatga cagcggcgac atcgtgatcg acccgaaaga attgctcgag
    20461 gcgaactggt atcgctatga cgatttgccg ttactcccgc cgcccggcac cgtagcgcgc
    20521 cgtctgatag aagatactgt ggcgatgtgt cgggcagagt atgagtgatg atacactgac
    20581 cgcctgacgc actaaggaac agccaaaatg accgaactta aaaacgatcg ttatctgcgg
    20641 gcgctgctgc gccagcccgt tgatgtcact ccagtatgga tgatgcgcca ggcgggtcgc
    20701 tatctaccgg aatataaagt cacgcgcgcc caggcgggcg attttatgtc gctgtgcaaa
    20761 aacgccgagc tggcgtgcga agtgactttg caaccgctgc gtcgctaccc gctggatgcg
    20821 gcgatcctct tttccgatat cctcaccgtg ccggacgcga tggggttagg gctctatttt
    20881 gaagccggag aaggtccgcg ttttacctcg ccagtcacct gcaaagccga cgtcgataag
    20941 ctgccaattc cggacccgga agatgagctg ggttacgtga tgaacgcggt gcgtaccatt
    21001 cgtcgcgaac tgaaaggcga agtgccgctg attggttttt ccggcagccc gtggacgctg
    21061 gcaacctaca tggtggaagg cggcagcagc aaagccttca ccgtgatcaa aaaaatgatg
    21121 tatgccgatc cgcaggcgct gcacgctcta ctcgataaac tggcgaaaag cgtcactttg
    21181 tatctgaatg cgcagattaa agccggtgct caggcagtga tgattttcga cacctggggc
    21241 ggtgtgctta ccgggcgcga ttatcaacag ttctcgctct attacatgca taaaattgtt
    21301 gatggtttac tgcgtgaaaa cgacggtcgc cgcgtaccgg tcacgctgtt taccaaaggc
    21361 ggcggacagt ggctggaagc gatggcagaa accggttgcg atgcgttggg cctcgactgg
    21421 acaacggata tcgccgatgc gcgccgccgt gtgggcaata aagtcgcgtt gcagggtaat
    21481 atggatccgt cgatgctgta cgcgccgcct gcccgcattg aagaagaagt agcgactata
    21541 cttgcaggtt tcggtcacgg cgaaggtcat gtctttaacc ttggtcacgg cattcatcag
    21601 gatgtgccgc cagaacatgc tggcgtgttc gtggaggcag tgcatcgact gtctgaacaa
    21661 tatcaccgct aaggagtgat tatggatctc gcgtcattac gcgctcaaca aatcgaactg
    21721 gcttcttctg tgatccgcga ggatcgactc gataaagatc caccggatct gatcgccgga
    21781 gccgatgtcg ggtttgagca gggcggagaa gtgacgcgag cggcgatggt gctgctgaaa
    21841 tatccctcgc ttgagctggt ggagtataaa gttgcccgca tcgccaccac catgccttac
    21901 attccaggtt ttctttcctt ccgcgaatat cctgcgctgc tggcagcgtg ggagatgctg
    21961 tcgcaaaagc cggatttagt gtttgtcgat ggtcatggga tctcgcatcc tcgccgtctt
    22021 ggcgtcgcca gccattttgg tttgatggtg gatgtgccaa cgatcggcgt ggcgaaaaaa
    22081 cggctctgcg gtaaattcga accgctctcc agcgaaccgg gcgcgctggc cccactgatg
    22141 gataaaggcg agcagctggc ctgggtctgg cgcagcaaag cgcgctgtaa cccgttgttt
    22201 atcgctaccg gccatcgggt cagcgtggac agcgcgctgg cgtgggtaca acgctgcatg
    22261 aaaggctatc gtctgccgga gccaacgcgc tgggcggacg cggtggcctc ggaacgtccg
    22321 gcgttcgtgc gctatacagc aaatcagccc taattcaggt aaactgcgga taatttccgt
    22381 atttgagaac ttaacatgtt acaaaaccca attcatctgc gtctggagcg cctggaaagc
    22441 tggcagcatg tcactttcat ggcttgctta tgcgaacgca tgtaccccaa ttacgccatg
    22501 ttctgccagc aaaccggttt tggtgatggg caaatttacc gtcgtattct cgatctcatc
    22561 tgggaaacgc tgaccgttaa agacgcaaaa gtaaatttcg acagccaact ggagaaattt
    22621 gaagaagcga ttccttcagc cgacgatttc gatctgtacg gcgtttatcc ggcaatcgat
    22681 gcctgcgtgg tgttaagtga actggtccat tcgcgtttga gtggtgaaac gctcgaacac
    22741 gcggtggaag tgagtaagac ctccatcacg accgttgcga tgctggaaat gactcaggtt
    22801 ggtcgcgaaa tgagcgatga agagcttaaa gaaaacccag ctgtagagca agaatgggac
    22861 attcagtggg aaatattccg acttttagct gagtgcgaag aacgcgatat cgagctgata
    22921 aaaggcctta gggcagacct gcgtgaggcg ggtgagagca atattggtat aatttttcag
    22981 caataagacc agaaaacgtg atttaacgcc tgatttgtcg tacttggagt cttccctttc
    23041 gccccccgtc tggtctacat ttggggggcg aaaaaaagtg gctatcggtg cgtgtatgca
    23101 ggagagtgct attctggcat ttccgtcgca ctcgatgctt agcaagcgat aaacacattg
    23161 taaggataac ttatgaacaa gactcaactg attgatgtaa ttgcagagaa agcagaactg
    23221 tccaaaaccc aggctaaagc tgctctggag tccactctgg ctgcaattac tgagtctctg
    23281 aaagaaggcg atgctgtaca actggttggt ttcggtacct tcaaagtgaa ccaccgcgct
    23341 gagcgtactg gccgcaaccc gcagaccggt aaagaaatca aaattgccgc agctaacgta
    23401 ccggcatttg tttctggcaa ggcactgaaa gacgcagtta agtaagattg cgtggcagtg
    23461 aacagtttta acgaaggggt ggtttcaccc cttttgtctt tctggcgtcg atcattgatg
    23521 ctggctggcg ctctgcttct cactgcctgt agtcataact cttcacttcc tccctttacc
    23581 gccagtggat ttgctgaaga ccagggcgcg gtacgcatct ggcgaaaaga cagcggcgat
    23641 aatgtgcatc tgcttgccgt gtttagcccg tggcgcagtg gcgataccac gacgcgagag
    23701 tatcgctggc agggcgataa cctcacgctc atcaatatca atgtttacag caaaccgccg
    23761 gtgaatattc gcgcgcgttt tgacgatcgc ggtgatctga gctttatgca acgtgaatcc
    23821 gatggggaaa agcagcagct ttctaacgac caaatcgatt tataccgtta tcgtgctgat
    23881 cagatccgcc agattagcga tgccttacgt caggggagag tcgtgctgcg ccaggggcgc
    23941 tggcatgcga tggaacagac cgtgaccacc tgcgaagggc aaaccattaa acctgattta
    24001 gattcgcagg cgatagcgca tatcgagcgc cgccagagcc gctcttctgt tgatgtcagc
    24061 gtggcatggc tggaagcgcc cgaaggttcg caattactgt tagtggcaaa ctctgatttc
    24121 tgtcgctggc aacccaacga gaaaacgttc tgatttacca gtggcccata cccatatgac
    24181 cgccaccacc gcagccgccg tagcccatgc ccattccggc tccgcgcgga atacccgctt
    24241 cagccatcgc gatatctcgt ttcacccgta actcatctaa cgactgacgc aaattctcca
    24301 tctctttggc gaccgcgtta attttgctgc tatccggtgg gttcgcggct aacagggcat
    24361 tgtattcata acgcttcgtc accagttgct gttgcagtgc gctgctttga gcgtaaaagt
    24421 cattatggat tttctgccac gctgtctgtt gttcgctggt caaaggcgcg gcattttgct
    24481 gccacatacc gtgtccgccg tgagcaaatg cagatgtcga tcccatcgcc attgctgaaa
    24541 gcgccatcat taccagggca attttcgtgt tccgtttcat ggttaatcct ccagtggttg
    24601 tcttacttcg ggtattgcat cttccgtgcc aacgatgaaa cgctgatatg acgggtaatc
    24661 tggcatgata aacgagtaaa aatgactcgc ctgctgcggg tagcgagtca tttttactca
    24721 ttgaaactta agcctttgtg ttacagcgca gggtaagcgc tgataaaaga tggcatgatt
    24781 tctgctgtca gaaagggatg agcaggcaaa gaagaagatg cgttttatgc aacgttctaa
    24841 agactcctta gctaaatggt taagcgcgat cctccccgtg gtcattgttg ggctggtagg
    24901 gttgtttgcg gtgacggtga ttcgcgatta tgggcgcgag actgccgccg ccagacaaac
    24961 gctgctggaa aaaggcagtg tacttattcg cgctcttgaa tccggctcgc gcgtcggcat
    25021 ggggatgcgc atgcatcatg cgcagcagca ggccttactg gaagaaatgg ccgggcagcc
    25081 tggagtacgt tggtttgcgg tcacggatga acaaggaaca atcgtgatgc atagcaactc
    25141 cggcatggtg ggaaaacagc tttattcccc gcaggaaatg cagcagttac atccgggaga
    25201 tgaagaagcg tggcggcgga tcgatagcgc agacggtgag cctgttctgg aaatttatcg
    25261 ccagtttcaa ccgatgtttg ctgctggaat gcaccggatg cgccatatgc agcagtatgc
    25321 cgcgacacca caagcaattt tcatcgcttt cgacgccagt aatattgtga gtgccgaaga
    25381 tcgtgagcag agaaacaccc tgattatcct cttcgccctg gcgacggtct tgctggcaag
    25441 cgtattgtca ttcttctggt atcgccgcta tctgcgctcg cgccagcttc tacaagatga
    25501 aatgaagcgc aaagagaagc tggtggcact ggggcatctg gcggcaggcg ttgcccacga
    25561 aatccgtaat ccactttcct caattaaagg gctggcgaaa tactttgccg aacgcgcgcc
    25621 agcaggggga gaagcgcatc aactggcgca ggtgatggcg aaagaagccg accgtttaaa
    25681 ccgcgtggta agcgagttgc tggaactggt taagccaacg catctggctt tgcaggcggt
    25741 ggatctcaac acgctgatta accactcatt acagctggta agccaggatg caaacagccg
    25801 ggagatccag ttacgcttta ccgccaacga cacattaccg gaaattcagg ccgatccgga
    25861 caggctgact caggtcctgt tgaatctcta tctcaatgct attcaggcga ttgttcagca
    25921 tggcgtgatt agcgtgacgg tcagcgaaag cggcgcgggc gtgaaaatca gcgttaccga
    25981 cagcggtaag ggaattgcgg cagatcagct tgaagccatc ttcactccgt acttcaccac
    26041 caaagccgaa ggcaccggat tggggctggc ggtcgtgcat aatattgttg aacaacacgg
    26101 tggtacaatt caggtcgcaa gccaggaggg aaaaggctca acgttcaccc tctggcttcc
    26161 ggtcaatatt acgcgtaagg acccacaagg atgacgcacg ataatatcga tattctggtg
    26221 gtggatgatg acattagcca ctgcactatt ttgcaggctt tactgcgcgg ctggggctat
    26281 aacgtcgcgc tggcgaacag cgggcgacag gcgctggagc aggtgcggga acaggttttt
    26341 gatcttgtgc tttgcgatgt gcgaatggcg gagatggacg gcatcgccac gctgaaagag
    26401 atcaaagcgt taaacccggc aattccggtg ctgattatga ctgcgtactc cagcgtcgag
    26461 acggcggtag aggcactgaa aactggggcg ctggattatc tcatcaagcc gctggatttc
    26521 gataacctac aggcgacgct ggaaaaggcg ctcgcgcata cgcacagtat tgatgctgaa
    26581 acacctgcgg tgactgccag ccagttcggt atggtcggta aaagcccggc gatgcaacac
    26641 ctgctcagtg aaatcgccct cgtcgcgcca tcggaagcca cagtgctgat ccacggcgat
    26701 tccggcaccg gtaaagagct ggtcgccagg gcgattcacg ccagtagcgc acgtagcgaa
    26761 aaaccgctgg taacgctcaa ctgtgcggca ctcaacgaat ccttgctgga atctgaattg
    26821 ttcggtcacg aaaaaggggc gtttactgga gccgataaac gccgggaagg gcgctttgtt
    26881 gaggcggacg gcggcacgct gtttctcgat gaaattggcg atatctcgcc gatgatgcag
    26941 gtgcgtctgc tgcgtgcgat tcaggagcgc gaagttcagc gtgtcggtag caaccagact
    27001 atctcggttg atgtccggct gattgcggcg acccatcgcg atcttgccgc agaggtgaat
    27061 gccgggcgtt ttcgccagga tctctactat cgcctgaatg tggtggcgat tgaagtacca
    27121 tcgctgcggc aacggcggga agatatccct ctgctggctg gccattttct gcagcgcttt
    27181 gccgagcgta atcgcaaggc ggtaaaaggt tttacgcccc aggcgatgga tctgttgatt
    27241 cattacgact ggccgggaaa tattcgtgag ctggaaaacg cggtggaacg ggcagtggtg
    27301 ctgctgccgg ggaatatatt tccgaacgcg agctgccgct ggcgattgcc agtacgccga
    27361 tcccgctggg gcaaagtcag gatattcagc cgctggtgga agtggaaaaa gaggtgattc
    27421 tggcggcact ggagaaaacg ggcggcaaca aaactgaagc cgcccgtcag ttagggatca
    27481 cgcgtaaaac gttattggca aaactgtcgc gttagttctg ctcgcgttcg atagcacgcc
    27541 agccgatatc tttccggcag aagcagtcgt cccagtggat atcggtcatt aaggcatagg
    27601 cgcgtttctg cgcttctgcc acggtatgac ccagcgcggt gacgcacagt acgcgcccgc
    27661 cgttggtcac tacctgctcg tcatccgcca gttttgtgcc cgcgtggaac actttgccgc
    27721 ctgccacttc ttccagcagc aggccgtgga tcacgtcacc ggtgcggtaa tcacccggat
    27781 atccacccgc agccatcacc acgccgagag aagcgcgttc atcccactcg gacgttttct
    27841 cgtccagttt gctttcacag gccgccaggc agagctcaac cagatcggac ttcatgcgca
    27901 gcataatcgg ctgggtttcc ggatcgccaa agcggcagtt aaattcaata accttcggat
    27961 tgccctgttt gtcgatcatc aggcccgcgt agagaaaacc ggtgtaggtg ttgccttccg
    28021 ccgccatgcc tttcacggtt ggccagataa tacgttccat ggtgcgctga tgaacgtcat
    28081 cggttactac cggcgcgggg gagtaagcgc ccatcccgcc ggtgtttggt ccggtatctt
    28141 tatcgcctac gcgtttgtga tcctggctgg tagccatcgg cagcacatgc tcgccgtcca
    28201 ccatcacgat aaagctcgct tcttcgccat cgaggaactc ttcgataacg atgcgatgac
    28261 ccgcgtcgcc aaaagcgttg cccgccagca tatcgtgaac agccgcttcc gcttcttcca
    28321 gcgtcatcgc cacgataacg cctttcccgg cagccagacc gtccgcttta atgacgattg
    28381 gcgcgccttt ctcacgcaga tacgccagcg caggttctac ctcggtgaag ttctggtatt
    28441 ccgccgtagg gatcttatgg cgggccagga aatctttggt aaacgctttt gagccttcca
    28501 gttgggccgc acctgcggtt gggccgaaga ttttcagccc ggcggcgcgg aaggtatcga
    28561 ccacgccttt caccagcggc gcttccgggc cgacgatggt cagatcaatc ttttcgtttt
    28621 gtgcgaaatc caacagcgcc gggatatcgg tcacgccaat agcaacgttt tgcagcgcgg
    28681 gttccagcgc agtgcctgca ttacccggag caacaaaaac agtctcaacc agcggcgact
    28741 gggccgcttt ccaggccagc gcgtgctcgc gcccgccgtt accaatcact aatactttca
    28801 tctattgctc cattaatggc ggaagtggcg catgtcggtg aagagcatcg caataccgtg
    28861 ctcgtcggcg gcggcaatca cttcgtcatc acggatggaa ccgccaggct ggattacgca
    28921 ggtcacgccc gcagcggcgg cggcatcaat accgtcgcgg aacgggaaga acgcgtcaga
    28981 agccatcgag gaacctttca cttccaggcc ttcatcggca gctttaatac cggcgatttt
    29041 cgcggagtac acgcggctca tctggcccgc gccaataccg atggtcatat tgtttttggc
    29101 atagacgata gcattggatt tcacgaactt cgccactttc cagcagaaca gcgcatcgcg
    29161 cagttcctgt tcggtcggct gacgttgggt gacgacgcgc agttcttccg caccgaccat
    29221 ccccaggtca cgatcctgaa ccagcagacc gccgttcacg cgtttgaaat caagacccgg
    29281 aacacgctcg ccccactgac cgcaggtcag aacgcgtacg ttctgcttgg cggcggtgat
    29341 tttcagggct tcttcgctgg cggaaggcgc aataatcact tcgacaaact gacgagaaat
    29401 gatggcctgt gcggtttccg catctagctc gcggttaaag gcaatgatgc cgccgaatgc
    29461 ggaggttggg tcggttttgt acgcgcgatc gtaagcatca agaatggaat tgccgatagc
    29521 tacaccgcaa gggttggcgt gcttcacaat cacacatgcc ggctcggcga actctttcac
    29581 gcactccagc gccgcatcgg tatcggcgat gttgttataa gagagggctt taccctgaac
    29641 ctgggttgcg gtagcaacgg aggcttcttt cacattctct tctatataga aggcagcctg
    29701 ctggtggctg ttctcgccgt aacgcatatc ctgcttctta atgaagttca ggttcagcgt
    29761 gcgtgggaag cgaccggcgg cttctttgct ttcaccgtgg tacgccggaa ccatgctgcc
    29821 gaagtagttg gcaatcatgc tgtcgtaggc ggcagtgtgt tcgaaggctt tgatggcgag
    29881 gtcgaaacgg gttgcaagcg tcagcgatcc ttcgttgtca tccatctctt taataatggc
    29941 gtcgtagtcg ctgctcttca ccacgattgc gacatcttta tggttcttag cggcggagcg
    30001 caccatggtc gggccgccga tatcgatgtt ctcaaccgca tcttccagcg agcagccttc
    30061 acgagcaaca gtctgggcga acggatacag gttaacaacc accatatcga taggctggat
    30121 ctgatgttct tccataatgg catcgtcctg gccgcgacgg cccagaatgc caccatgtac
    30181 tttcggatgc agggtcttca cgcgtccatc catcatctcc gggaaaccgg tgtaatcgga
    30241 aacttcggtt accggcagac ctttttctgc taacagacgg gcagtgcccc ctgtagacag
    30301 cagctccaca ccgcgtgcgg aaagtgcctg ggcgaattcg acgataccgg ctttgtcaga
    30361 aacactgagc agagcgcggc ggactggacg acgttgttgc atggtaaatc ccctggattt
    30421 gactattaca gagagcgtta gctgaatttt tcgcgaaaaa ctcagctaac gcccctaacg
    30481 gggcatcctt atttttcgcc cgcattgtaa cgaaaacgtt tgcgcaacgc tcgcgaattt
    30541 ttctctttca atggtgatca caattttgac agtggctacc gtgggaaaaa tacagaaatt
    30601 acattgatga ttgtggataa ctctgtgcgt aaaaaggtat aaagcggggt tttgctgggg
    30661 aatgcagcag tcagtcattt ttctgcaatt tttctattgc ggcctgcgga gaactcccta
    30721 taatgcacct ccatcgacac ggcggatgtg aatcacttca cacaaacagc cggttcggtt
    30781 gaagagaaaa atcctgaaat tcagggttga ctctgaaaga ggaaagcgta atatacgcca
    30841 cactcacgac agtgcgctaa agctcgtcgc
//
LOCUS       DAJVUK010000031        30123 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.031, whole genome shotgun sequence.
ACCESSION   DAJVUK010000031 DAJVUK010000000
VERSION     DAJVUK010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30123
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.031"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1679)
                     /gene="fruA"
                     /locus_tag="OQQ57_001336"
     CDS             complement(<1..1679)
                     /gene="fruA"
                     /locus_tag="OQQ57_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HCS1956164.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAVARKAKLEIIDNPNDAEMA
                     IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVA"
     gene            complement(1696..2634)
                     /gene="fruK"
                     /locus_tag="OQQ57_001337"
     CDS             complement(1696..2634)
                     /gene="fruK"
                     /locus_tag="OQQ57_001337"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HCS1956165.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            complement(2634..3764)
                     /gene="fruB"
                     /locus_tag="OQQ57_001338"
     CDS             complement(2634..3764)
                     /gene="fruB"
                     /locus_tag="OQQ57_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HCS1956166.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
                     RAANAFAVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            4132..5313
                     /gene="setB"
                     /locus_tag="OQQ57_001339"
     CDS             4132..5313
                     /gene="setB"
                     /locus_tag="OQQ57_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HCS1956167.1"
                     /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
                     RNYFVLLFVGVFLSSFGSTANPQMFALTREHADKTGREAVMFSSFLRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDT
                     LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRFLMRVAAVGGVCFYAGMLMAHSPAILLGLQLLNAIFIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRTKD
                     V"
     gene            complement(5310..5564)
                     /locus_tag="OQQ57_001340"
     CDS             complement(5310..5564)
                     /locus_tag="OQQ57_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HCS1956168.1"
                     /translation="MECRPGCGACCTAPSIFSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAS"
     gene            5719..6291
                     /gene="yeiP"
                     /locus_tag="OQQ57_001341"
     CDS             5719..6291
                     /gene="yeiP"
                     /locus_tag="OQQ57_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HCS1956169.1"
                     /translation="MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            6514..7980
                     /locus_tag="OQQ57_001342"
     CDS             6514..7980
                     /locus_tag="OQQ57_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HCS1956170.1"
                     /translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
                     DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
                     AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
                     APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV
                     SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA
                     GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLNE
                     QAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMNGSQKLPQRMLAGIRIHLGRE
                     TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE
                     VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
     gene            8098..9084
                     /gene="yeiR"
                     /locus_tag="OQQ57_001343"
     CDS             8098..9084
                     /gene="yeiR"
                     /locus_tag="OQQ57_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding GTPase YeiR"
                     /protein_id="HCS1956171.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWTVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            9123..9836
                     /gene="lpxT"
                     /locus_tag="OQQ57_001344"
     CDS             9123..9836
                     /gene="lpxT"
                     /locus_tag="OQQ57_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HCS1956172.1"
                     /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            10248..10814
                     /gene="mepS"
                     /locus_tag="OQQ57_001345"
     CDS             10248..10814
                     /gene="mepS"
                     /locus_tag="OQQ57_001345"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HCS1956173.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            10995..12551
                     /locus_tag="OQQ57_001346"
     CDS             10995..12551
                     /locus_tag="OQQ57_001346"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HCS1956174.1"
                     /translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
                     ITSPVLDAVLTLAKRLNMLTVAEGGETPEQARWLSEPGVNFMQGYWISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            12633..14447
                     /locus_tag="OQQ57_001347"
     CDS             12633..14447
                     /locus_tag="OQQ57_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1956175.1"
                     /translation="MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
                     SKGDGYDRDNLLKADTLLNEAGWVLKGQQRVNATTGQQLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSHPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
     gene            14448..15542
                     /locus_tag="OQQ57_001348"
     CDS             14448..15542
                     /locus_tag="OQQ57_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HCS1956176.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     HNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTILTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            15542..16567
                     /locus_tag="OQQ57_001349"
     CDS             15542..16567
                     /locus_tag="OQQ57_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1956177.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
                     FDPNKAV"
     gene            16569..18158
                     /gene="yejF"
                     /locus_tag="OQQ57_001350"
     CDS             16569..18158
                     /gene="yejF"
                     /locus_tag="OQQ57_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HCS1956178.1"
                     /translation="MTQTLLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFRGESLLHASDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKLQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFAAPQQEYTRQLLALS"
     gene            complement(18162..18506)
                     /locus_tag="OQQ57_001351"
     CDS             complement(18162..18506)
                     /locus_tag="OQQ57_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956179.1"
                     /translation="MTSLQLSIVHRLPQNFRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(18839..20022)
                     /gene="bcr"
                     /locus_tag="OQQ57_001352"
                     /pseudo
     CDS             complement(18839..20022)
                     /gene="bcr"
                     /locus_tag="OQQ57_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
     gene            complement(20050..20745)
                     /gene="rsuA"
                     /locus_tag="OQQ57_001353"
     CDS             complement(20050..20745)
                     /gene="rsuA"
                     /locus_tag="OQQ57_001353"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HCS1956180.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            20894..22654
                     /locus_tag="OQQ57_001354"
     CDS             20894..22654
                     /locus_tag="OQQ57_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCS1956181.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            22779..23063
                     /gene="rplY"
                     /locus_tag="OQQ57_001355"
     CDS             22779..23063
                     /gene="rplY"
                     /locus_tag="OQQ57_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HCS1956182.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVMNMQAKAEFYSEVLAIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(23202..24209)
                     /gene="yejK"
                     /locus_tag="OQQ57_001356"
     CDS             complement(23202..24209)
                     /gene="yejK"
                     /locus_tag="OQQ57_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HCS1956183.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTKFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            24391..24618
                     /locus_tag="OQQ57_001357"
     CDS             24391..24618
                     /locus_tag="OQQ57_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HCS1956184.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            24638..26398
                     /gene="pbgA"
                     /locus_tag="OQQ57_001358"
     CDS             24638..26398
                     /gene="pbgA"
                     /locus_tag="OQQ57_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HCS1956185.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRPQSDEQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALLDSGKLDNTVVIITAG
                     RGIPLSEDEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            26473..26549
                     /locus_tag="OQQ57_001359"
     tRNA            26473..26549
                     /locus_tag="OQQ57_001359"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26507..26509,aa:Pro,seq:ggg)
     gene            26768..28009
                     /locus_tag="OQQ57_001360"
     CDS             26768..28009
                     /locus_tag="OQQ57_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1956186.1"
                     /translation="MARKTPPLTTVQIKAARPAEKEYTLQDGGGLFLLVKPSGSKLWR
                     FSYYRPSDKKRILLSFGSLDDVSLADARKRRSEYRALISAGTDPQGHEKKKREAEARR
                     QGNTFENVAAAWYQVKISQNLAPNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVL
                     TPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPE
                     QLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQWTIPAGRMK
                     MRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQPMNSQTANAALRRMGFAGV
                     LVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYIEKRIVLMRWWGE
                     FVEAAATGVTLASGKRGIRAV"
     gene            28505..28711
                     /locus_tag="OQQ57_001361"
     CDS             28505..28711
                     /locus_tag="OQQ57_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HCS1956187.1"
                     /translation="MEAIRKIIFRQEVKKIIHIKADSTLQSMINAGEFPQGFRVGLRR
                     RGWYEDDVLAWQKEREQEARGTAA"
     gene            28726..29391
                     /locus_tag="OQQ57_001362"
     CDS             28726..29391
                     /locus_tag="OQQ57_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001329530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956188.1"
                     /translation="MTNTKKAAPIWSRLSEQLTRCALCVYDPKHKHGDDSRYQAGGQC
                     NQSGSVRCHTCNERFSLYSLRNCSRAKAHGANLSDSCSIFLRRLFRAGDNVLVNSLSV
                     IVLSCIAMRRNTSHHGADSFYPLGSMPRRFSSVRPNSLSQLARLMPSLCASLSNCSFS
                     SGEIRILNCGDCPSPLGLLSRLIIDKWSPIELAFPLLGGHLNTRALKKAKPRKCHYHS
                     QGF"
     gene            29417..29617
                     /locus_tag="OQQ57_001363"
     CDS             29417..29617
                     /locus_tag="OQQ57_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HCS1956189.1"
                     /translation="MVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARS
                     RCPSGCVAVFAARIRQGETYAQ"
     gene            29607..29828
                     /locus_tag="OQQ57_001364"
     CDS             29607..29828
                     /locus_tag="OQQ57_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956190.1"
                     /translation="MHNKTTPNAAAAALTTLMHALIDIECTAELAQGEEQKDRTQFAL
                     ECIRYIATRSLNDAKNILVADCENGGGYA"
     gene            29821..30054
                     /locus_tag="OQQ57_001365"
     CDS             29821..30054
                     /locus_tag="OQQ57_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956191.1"
                     /translation="MRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYK
                     STGLDVLNIAADYAEYVAEARYRRKFPEDVSHA"
BASE COUNT         7330 a         7815 c         7514 g         7464 t
ORIGIN      
        1 gctactgcgt ccacttccgg acgtttcagg aaggcatagg ccaaacccgc caccagcgta
       61 ccggcaataa ttgctaccag gtaacccagt accggcgtaa tagcgccagg gatcagcaga
      121 acaaacagac caccgtgcgg tgccatcagt ttcgcaccaa tcgccattga gattgcgcca
      181 gtcagcgccc cacccacgat acagcacggc agcacacgca tcggatcacg agcagcaaac
      241 ggaattgcac cttccgaaat gaagcacagt cccaatacca gagcggcttt gccaccttcc
      301 tgctgcgctt tgtcgaattt gcgacgcgcc accattgttg ccagacccat tgccagcggt
      361 ggcaccatac ctgccgccat aatcgccgcc atcgggccat aggtttgagt actcagcaga
      421 cccacaccga atgcgtacgc tgctttgttt accggaccgc ccatgtcagt acacatcatg
      481 ccaccgagga tcgcccccag cagaaccgca ttcgcagtcc ccatggtctg cagccagtga
      541 gtcagccctt cgagaatgcc agcaactggt ttaccgatca ggtagatcat cgccagaccg
      601 accaccagac tggaaattag cggaatgatc aggatcggtt tcagcgcctc catactctgt
      661 ggcagtttca gttgcgtact gattaacttc gcaatgtaac cagccaggaa gccagcaatt
      721 ataccgccaa taaagccaga accggtgctg accgccagca taccgccaat cagacccggc
      781 gtgaggcccg gacgatcggc aatggagaag gcaatataac ctgccagtac cggcaccatc
      841 agcgcaaagg ctgaaccacc gccaatctgc atcagcgccg ctgccaacgt acccggctct
      901 ttaaacgctt cgataccaaa agcaaaagaa agcgcgatac acagaccacc tgcgacgacc
      961 atcggcagca tataagagac gcctgtcagc aagtgacggt aagcgcctgc actctctttc
     1021 ttaccttcag tggtcgccgt ttgagctttg cccgccggtt catacggcgt tgcttcagca
     1081 accgctttat ccagttcctg cgcggttttc ttcagcgcca gaccggtaga ggtacgatac
     1141 atcggtttac cagcaaattt cgccagatcc acttcgatat ctgccgccac aatcaccaga
     1201 tccgctgctg cgacttcttc aggggtgatt gcattgcccg cgccaacaga accacgggtt
     1261 tcaactttca cccaccagcc acgttttttc gcttcggttt caatggcttc agccgccata
     1321 aaggtgtgtg ctacgccagt cgggcaagca gtcaccgcaa ctacgcgttt cggaccgctg
     1381 gcagcaaccg gtgctgtcgc agcgaccggc gcagtgtaag gtttcgcatg gcctttggct
     1441 tcactcagga acagctcagg gtgcgcaact gcccgggaaa tatcacccag ccagacattt
     1501 ttaccgttca gcgcgctgtc attcgggatg gaatcaccga gaacaatcgc catttctgcg
     1561 tcgttcggat tgtcgatgat ttccagtttt gcttttcgcg ccaccgcgcc cagcagggtc
     1621 ttcgccatat aggcgcgtgc ctgaccgaga ttagcgtcaa taatcagcag cgttttcatt
     1681 atgcctctcc tgctgtcagt taaaaggttg taagtcgacg cgcgccatca ttgcggccaa
     1741 ctgcggacga tcggtaatac ccacattgct ttgacttacc gccagggctg caacagctgt
     1801 cgccagacgc agtgtgtgtt cactggattc acgcatcagc aagccataaa tcaggccacc
     1861 aaccatagaa tcccctgcgc caacggtgct tacgacatcg actgacggtg gtttggcgat
     1921 ccattcgccg gaggcattaa cccaaagcgc gccttcggca cccagtgaaa taacaacatg
     1981 cgcaatacct tgttcacgta gcgcatgtgc agcttcaatc acatctttca tttcaggcag
     2041 tttacggcct gcccaaattt ccaactcgcg gcggttaggt ttcaccagcc acggtgccgc
     2101 tttcaaacct gctactaacg cttcacggct actatcaaag ataatgcaag gacactgact
     2161 acgcaggcga gtcatccagt cggtgaacgc ttccgggctg acgcctgacg gtaagcttcc
     2221 gctgacacag accatatcga actgaccgag ccagctcaga gaatcagtca caaagcgttc
     2281 ccagtcggcg ggggtgactt caaaacccga gaagttgaag tcggtcactt cgccgtcttt
     2341 ttccgtcagc ttaacgttaa ttcgggtgcg cccctgtaca acctggaaac ggttggcaat
     2401 gcccagctcg ctgaacagtt gctgaaaacc atcctgattg tctttaccca ggaagccgcc
     2461 aacggtgaca tcaattccca ggtcttttaa tactttggcc acgttgatgc ctttacccgc
     2521 cgcatgcaga ccggtggttt tcaccaggtt cacttcgccg cgttcaattt ccgggcagaa
     2581 accaacaagg tcataagccg gattaagggt gatcgtagca acacgtctgc tcattatgcg
     2641 ccctccccaa gaccagcagc gatagcgtcg ccaatggctt tcagcgcctg ttcagcatct
     2701 gcaccctggg cggtaaagcg taggcgatga cctttcttaa cgccaagtgc cacaactttc
     2761 atcagactac gtccgtttgc cggtttgccg gtgccatcaa ggtttgtcac ggtaatatca
     2821 ctgttaaatt gtttaatggt attgaccagc atggtacctg gacgagcatg caggccgtgt
     2881 tcattgcgca ccacaaactc cgcgcttaac acgtcgtcgg tcggcgcatc atcgctggtc
     2941 agcagcgcca gcaacgttgc cgcatctgct ttcagcaagc ggtcagcttt attgtcgagc
     3001 aataaatcag cgagacgctt aagaaccgcg atgggctgat cgtcattcat cgccacactc
     3061 accagcatgg ctgccgtttc gccgtccaca gcaaaagcat ttgccgcacg gcttaccgca
     3121 atcgcgctac gcagattgcc ttcggcgcta tcgctcagcc agataccctg tccgagattc
     3181 agcggttgtt cattgatggc tttggtgacg aaagtggcgt caactgcccc cgcctctttc
     3241 agacgcgcag cgttcagcgc ctgaagagtc agcagatcgc tggcgacgat atccagcgtc
     3301 agcatttcgt tgtcgagctt cagctgctca ctctgctttt cgcccatcag taatgcgcga
     3361 agttcttctg ctgttgttgc tgacttcagt tgttcagcaa cggaatcatc gctcagtacg
     3421 tgggtcagct ggcgtagcag gcccagatgt tcatccgagc tggcagcaat accgattgcc
     3481 acgtacgcta cctgaccgtc accccaggtg acgccttccg ggaactgaaa tacctgaacg
     3541 ccggttttca gcacctgatc gcgggtgtcg gtagtgccgt gtggaatagc aataccattg
     3601 ccgaggaacg ttgaggtttg ctgttcgcgc gccagcatgc cattgacgta gccttctgct
     3661 acattaccgg cctgcaccag cgccgcagcg acctggcgaa tcgcctcttc tttgtctccg
     3721 gccttttcgc ccggatggat gtcctgtacg gataactgga acatagttct cctctcttgc
     3781 tgaattgaaa cgattcagcc tctatgagaa aaaaagcgcc aacctggctt agggttaaag
     3841 acaagatcgc gctgaaacgt ttcaagaaag cataatactt ctgtttcagc acgcaaggaa
     3901 agccgtaaag ttatgagcaa aagtttgatg tgctgcacat ttttttgtca tttttcctaa
     3961 ttgctgatgg gaaaatccgt tatcagcaat ttcatttcag cagcgtcagc agccaatcag
     4021 caacagtgaa atggcatttt gattattcgt ggcgcttttg atttcgctgt ctgtttattt
     4081 tctgacaagc agcgtaaact ccgcgtcttc ctcttccagt gatagacctg catgcataac
     4141 tcccccgcag tctccagcgc gaaatcgttt gacctgacct cgacggcgtt tttaatcgtt
     4201 gcctttctca ccggtattgc gggtgctctg caaaccccga cactcagtat tttccttacc
     4261 gatgaagtac atgcccgtcc ggcgatggtg ggattcttct ttaccggcag cgctgtcatt
     4321 gggattctgg taagtcagtt tctcgctggg cgctctgata agcgcggcga tcgcaaatcg
     4381 ctgattgtct tttgctgcct gttaggcgtg ctggcctgca ccctttttgc ctggaatcgc
     4441 aactactttg ttttgctatt cgttggcgtc tttcttagca gctttggctc gaccgctaac
     4501 ccgcaaatgt ttgcccttac ccgtgaacat gccgacaaaa ccggacgtga ggcggtgatg
     4561 ttcagctctt ttttacgcgc tcaggtttca ctggcatggg tcattggccc accgctggct
     4621 tatgcgttag cgatgggttt cagctttacg gtaatgtatc tgagcgcagc ggtagcgttt
     4681 attgtttgcg gcgtgatggt gtggctgttt ttaccgtcga tgcaaaaaga gcttccgctg
     4741 gcgaccggca cggttgaagc gccgcgccgt aaccgtcgcg atacgctact gctgtttgtc
     4801 atttgtacat tgatgtgggg ctcgaacagc ctgtacatca tcaacatgcc gctatttatt
     4861 atcaacgaac tgcatcttcc cgagaaactg gccggtgtga tgatggggac cgccgccggg
     4921 ctggaaatcc cgacgatgtt gattgccgga tatttcgcca aacgtctggg taagcgtttc
     4981 ttaatgcgcg ttgctgccgt gggtggcgtc tgtttttacg caggaatgct gatggcgcat
     5041 tcacctgcca ttctgttggg cttgcagctg ctaaatgcta tttttattgg cattctgggc
     5101 ggcatcggga tgctctattt tcaggatttg atgcccggtc aggcaggttc agccaccacg
     5161 ctctatacca acacgtcgcg cgtgggctgg atcatcgcag gatcagtggc gggcatcgtc
     5221 gccgagatct ggaattatca cgctgtgttc tggtttgcga tggtgatgat tatcgccact
     5281 ctgttttgct tactgcggac taaagatgtt taagacgcgg tcagcatttc cagatcgata
     5341 agccaggtca tggcctgctg acgcgagtta ccgcacattt cagcgctggc ttgtaagcct
     5401 gcacagactt tcggtcgcag tggcgaggtg aaaattttac agcgttgctg ttcatcaagc
     5461 tgaatgcagg gcgtattggc gggcttgcca tctggcatac cgggaatagg gctgaaaatt
     5521 gaaggggcag tgcaacacgc cccgcaaccc ggacggcatt ccatacgttg ttctcttaag
     5581 gttaaccacc ggattgatga gcgcgcacag taccaccttt tttgcaccag caaaagtgcg
     5641 aataccactt gcccgaaagg cccgtcgcga gtactttgtc gcgatatttt tgacattttc
     5701 gactacagga atttttcgat gccaagagcg aacgaaatta aaaaaggtat ggtactgaat
     5761 tacaacggca aactgctgct ggttaaggat attgatattc agtcgcccac tgcccgcggt
     5821 gccgctacgc tgtacaaaat gcgtttttct gatgtccgta ccgggctgaa agtagaagag
     5881 cgtttcaaag gtgatgatat cgttgacacc gtgacgctga cccgccgtta cgttgacttc
     5941 tcctatgtcg atggcaacga atatgtcttt atggataaag aagactatac cccgtatacc
     6001 ttcaccaaag atcagattga agaagagttg ctgtttatgc cagagggcgg catgccggac
     6061 atgcaggtgc tgacctggga cggtcaactg ctggcgcttg agctgccgca gaccgttgat
     6121 ctggaaatcg ttgaaaccgc accaggcatc aaaggggcat ctgccagcgc ccgtaacaaa
     6181 ccggcgacat tgagcactgg tctggtgatt caggtaccag aatacttaag cccgggcgaa
     6241 aaaattcgta tccatatcga agaacgccgt tatatggggc gtgctgacta acttcagccg
     6301 catgcagaaa agggatagct caggctgccc cttttttaat ttattatacc aatcttctat
     6361 tttgcgcttc ctgaacacct tacgccctca attttcactc gttgattgat cgccctcaca
     6421 cttcatcgca ttaacaatcc agaccaattt caattgctgt catataactt tacactgtca
     6481 ttgttaattt atcgttacta agacgtgact cctatgaaga caattgcctc cgttacgctc
     6541 ccgcatcatg tacacgctcc acgctacgat cgccagcagt tgcaatcacg tatcgttcat
     6601 tttggctttg gcgcctttca ccgcgctcat caggcgttac tgaccgatcg tgtgctgaat
     6661 gcccagggcg gcgactgggg gatctgtgaa atcagcttgt tcagcggtga tcaactgatg
     6721 agccagctcc gcgcacagaa ccatttatat accgtgctgg agaaaggtgc ggacggcaat
     6781 caggtgataa ttgtcggtgc cgttcacgaa tgccttaatg caaaactgga ttccttagcg
     6841 gcaattattg agaaattttg cgagccacag gtggcaattg tttccctgac gattaccgaa
     6901 aaaggctatt gtattgaccc ggccaccggt gcactcgaca ccagtaatcc gcggattatt
     6961 cacgatctac aaacccctga agaacctcac tccgcaccgg gtattctcgt cgaagcactg
     7021 aaacgccgcc gtgagcgcgg ccttacaccg tttaccgtgc tctcctgcga caatattccc
     7081 gacaatggcc atgtggtgaa aaacgcggtg ctgggaatgg cagaaaaacg ttcgccagaa
     7141 ctcgccgggt ggataaaaga acacgtcagt tttccgggaa ccatggtcga ccgcattgtt
     7201 ccggctgcaa ccgacgaatc actggcagaa atcagccagc atctgggggt aaatgatccc
     7261 tgcgcgatta gctgcgaacc gtttatccag tgggtggtgg aagataactt cgtcgctggg
     7321 cgtcctgcct gggaagtcgc aggtgtacaa atggtgaatg atgtcctgcc atgggaagag
     7381 atgaaactgc gtatgcttaa tggcagccac tcttttctcg cttatctggg ttacctttca
     7441 ggattcgccc atatcagtga ttgcatgcag gatcgcgcat ttcgccatgc cgccagaaca
     7501 ttaatgctga atgagcaagc gccgacacta caaattaaag atgtcgattt aacacaatat
     7561 gcggacaagt taattgctcg ttttgctaat ccggcgctga aacataagac ctggcaaatc
     7621 gcaatgaatg gtagccagaa attaccgcaa cgtatgctgg caggtattcg catacatctg
     7681 gggcgcgaaa cggactggtc gttgctggca ttaggcgttg ctggctggat gcgttacgtc
     7741 agcggcgttg atgatgccgg aaatgccatt gatgttcgcg atccgcttag cgataaaatt
     7801 cgcgaacttg ttgcgggcag cagcagtgaa caacgcgtaa ccgccctgct ttccctgcgt
     7861 gaagttttcg gtgatgatct gccagataac ccgcattttg tgcaggccat cgaacaagcc
     7921 tggcaacaaa tcgtacaatt cggcgcacat caggcgctat taaacaccct caaaatttaa
     7981 cgatttctgc ggttaaagcg gatgaagctc accttcgtcc gctctcccct tctcttttct
     8041 gcctttttta gccaggatta acgctcagtt aacttaccag agtattgcgg agccgttgtg
     8101 accaggacca acctcatcac cggttttctc ggcagcggga aaaccacgtc gattcttcat
     8161 ctgttagccc ataaagatcc caacgaaaaa tggacggtac tggttaatga atttggggaa
     8221 gtcggaattg atggtgcttt gctcgccgat agcggcgcat tgctgaaaga gatccccggc
     8281 ggctgcatgt gctgcgttaa tggtttaccc atgcaggtag ggttgaatac cttactgcgt
     8341 cagggaaaac cagaccgctt gttgatagag ccgaccgggc tgggccatcc gaaacagatc
     8401 ctcgatctgt taaccgcacc agtctatgaa ccgtggatag atctgcgcgc caccttgtgc
     8461 attctcgatc cacgcttgct gctggacgaa aaaagcgcca gcaatgaaaa cttccgtgac
     8521 cagctggctg ccgcagacat cattgtcgcc aataaatccg accgtgcgac gcccgaaagt
     8581 gagcaagcgc tacagcgttg gtggcagcaa aatggtggcg atcgacaatt aattcacagt
     8641 gagcatggga aagttgacgg tcatcttctg gatttgccgc gtcgcaattt agccgagttg
     8701 cccgccagcg ccgcgcattc tcatcagcat gtcgtgaaaa aagggttagc agcgttaagc
     8761 ctgccagagc atcaacgctg gcgtcgcagt ctgaacagcg ggcaaggata tcaggcctgc
     8821 ggctggatat tcgacgctga tacggtattc gacaccattg gcattctgga atgggcgcga
     8881 cttgcaccgg tggaacgcgt caaaggcgtg ctgcgtattc ccgaagggct ggtacgaatc
     8941 aaccgtcagg gcgatgacct gcacattgaa acgcaaaacg ttgcgccacc ggacagccgt
     9001 attgagctga tttccagcag cgaagctgac tggaatgcct tgcagagcgc gctgttgaag
     9061 cttcgtttag cgactaccgc gtaaggttgc ctgcgttttt cagtaagata attagagaaa
     9121 atatgattaa aaatttgccg caaatagtgt tgttgaatat tgtcggcctc gcgctgtttc
     9181 tttcctggta tattcccgtt aatcatggat tatggttgcc gattgatgcg gatatttttt
     9241 atttctttaa tcagaaactg gtcgaaagta aggccttttt atggctggtt gcattgacca
     9301 acaatcgcgc tttcgacggt tgttctctgc tggcgatggg aatgttgatg ctgagtttct
     9361 ggctgaaaga aaacgcccca ggcagacgac gtatcgtgat tattggtctg gtaatgctat
     9421 taactgcagt ggtattaaac cagctgggtc aggcattaat tcctgtaaaa cgggccagcc
     9481 caacattgac gtttactaat attaaccgcg tcagcgaact gctctctgtc cccacgaaag
     9541 atgcctcacg agatagcttt cccggcgatc acggcatgat gctgcttatt ttttcggcat
     9601 tcatgtggcg ttatttcggt aaagttgcag gtcttatcgc ccttattatt tttgtggttt
     9661 ttgcgtttcc cagagtaatg attggcgcac actggtttac tgacatcatt gtcggttcga
     9721 tgaccgtgat attgatcggt ttgccctggg tgttgctgac gccattaagt gatcgattaa
     9781 tcaccttttt tgacaaatca ctaccgggaa aaaacaaaca tttccaaaac aaataactca
     9841 cagtaattaa catcatcagg tttattttta tagtgaggat aatcctgatg atgcgcaccg
     9901 tgctttcatc tatcgaacgc aaaaatcatt ctctaagtaa atgaatggat tgcatgcgtt
     9961 tcactcaatc gtactttaat tgaccaatcc cgcttattaa ctttctgtat cactttttct
    10021 tataaaaaat catgtaaaac cgctcgccaa gaccgcacca atcgggtaat ctcgaactcg
    10081 ttttgcctcg gcggtagatt atcctcacag catataattt tgtgcgttag tccacagatt
    10141 tggccttaag gaattgtttc aacatgccca ggtaattagt ctcgtgtcgc ttggcatttt
    10201 tttataacga tatttgtcgt taaggacttc aagggaaaac aaacaacatg gtcaaatctc
    10261 aaccgatttt gagatatatc ttgcgcggga ttcccgcgat tgcagtagcg gttctgcttt
    10321 ctgcatgtag tgcaaataac accgcaaaga atatgcatcc tgagacacgt gcagtgggta
    10381 gtgaaacatc atcactgcaa gcttctcagg atgaatttga aaacctggtt cgtaatgtcg
    10441 acgtaaaatc gcgaattatg gatcagtatg ctgactggaa aggcgtacgt tatcgtctgg
    10501 gcggcagcac taaaaaaggt atcgattgtt ctggtttcgt acagcgtaca ttccgtgagc
    10561 aatttggctt agaacttccg cgttcgactt acgaacagca ggaaatgggt aaatctgttt
    10621 cccgcagtaa tttgcgtacg ggtgatttag ttctgttccg tgccggttca acgggacgcc
    10681 atgtcggtat ttatatcggc aacaatcagt ttgtccatgc ttccaccagc agtggtgtta
    10741 ttatttccag catgaatgaa ccgtactgga agaagcgtta caacgaagca cgccgagttc
    10801 tcagccgcag ctaataaacc gtttggatgc aatcccttgg ctatcctgac gagttaactg
    10861 aaagcactgc ttaggtagtg cttttttgtt ttcattcatc agagaaaatg atgtttccgc
    10921 gtcttgatcc aggctatagt ccggtcattg ttatctttta aatgttgtcg taatttcagg
    10981 aaattaacgg aatcatgttc atacgcgctc ccaattctgg acgtaagctc ctgcttacct
    11041 gcattgtagc aggcgtgatg attgcgatac tggttagctg ccttcagttt ttagtggcct
    11101 ggcataagca cgaagtcaaa tacgacacac tgattatcga cgtacaaaag tatctcgata
    11161 cctattttgc cgacctgaaa tccactactg accggcttca gccgctgacc ttagatacct
    11221 gccagcaggc taaccccgaa ctgaccgctc gcgcggcgtt tagcatgaat gtccgtacgt
    11281 ttgtgctggt gaaagataaa aaaacattct gttcatctgc gactggtgag atggacattc
    11341 cactcaatga attgattccg gcgctcgaca ttaataaaaa cgtcgatatg gcgatcttac
    11401 ccggcacgcc gatggtgccg aacaaacccg caatcgtcat ctggtatcgc aaccctttgc
    11461 tgaaaaatag cggtgtgttt gccgctctga atctcaacct gacgccttct ctcttttata
    11521 gttcacggca ggaagattac gatggcgtcg ccctcattat tggcaatact gcgctatcta
    11581 ccttttcttc acgtttgatg aacgttaatg aattaaccga catgcctgtc cgtgaaacta
    11641 aaattgcggg cattcctctg accgttcggc tttatgcgga tgactggaca tggaacgatg
    11701 tgtggtacgc atttttactg ggcggcatga gtggaactgt cgttggcctg ctctgctatt
    11761 acctgatgag cgtacgtatg cgccccggca gagaaatcat gaccgccatc aagcgcgaac
    11821 aattttacgt ggcgtatcaa ccggtggtgg atacacaagc tttgcgagta acgggcctgg
    11881 aagtactgct acgctggcgg catcctgtcg cgggagaaat tcccccggat gccttcatta
    11941 actttgccga atcgcaaaag atgattgtgc cgctgactca gcacctgttt gagttaattg
    12001 cccgcgatgc cgcagaatta gaaaaagtgc tgccagtagg cgtcaaattt ggtattaaca
    12061 ttgcgccgga ccatctgcac agcgaaagct ttaaagcaga tatccagaaa ctgctcactt
    12121 ccctgcccgc acaccatttc cagattgtgc tggaaattac cgagcgcgat atgctgaaag
    12181 agcaagaagc cacacaactc ttcgcctggc tgcactcggt cggcgtagaa attgctattg
    12241 atgacttcgg caccgggcac agcgcgctta tctatcttga gcgttttacg ctcgattatc
    12301 tgaaaattga ccgtggattt atcaacgcca tcggtacgga aacgatcact tcacccgtac
    12361 ttgacgcggt gctgacgctg gcgaaacgcc tcaatatgct gacggttgct gaagggggcg
    12421 aaacgccgga acaggcgcga tggctaagcg aacccggcgt taatttcatg caaggctact
    12481 ggattagtcg cccgttaccg ctggacgatt ttgttcgctg gctgaagaaa ccgtatacgc
    12541 cgcagtggta aggtgtgctt acgtccctta ttattcatag tgaaagcatg ccggattgcg
    12601 gctaatgatg agtaaaagga aatccgttgc agatgattgt gcgcatactg ctgctgttta
    12661 tcgccctgtt caccttcggt gcgcaggcgc aggctatcaa ggaaagctat gcctttgccg
    12721 tgctgggcga accccggtac gcatttaatt tcaaccattt tgattatgtg aaccccgccg
    12781 cgccaaaagg tgggcagata acgttgtcag ccctcggtac cttcgataat ttcaaccgct
    12841 atgcactgcg cggcaacccg ggcgcacgca ccgagcagtt gtacgacacg ctatttacga
    12901 cttccgatga cgaaccaggc agttattacc cgctgattgc tgaaagtgca cgctatgctg
    12961 acgattattc ctgggtggag gtcgctatta atccgcgcgc ccgttttcat gatggttcgc
    13021 ccattactgc ccgcgatgta gagtttactt ttcaaaaatt tatgaccgaa ggcgtgccgc
    13081 aatttcgtct ggtctacaaa ggcaccaccg tcaaagccat tgcaccgtta accgtgcgca
    13141 ttgagttagc taaacccggc aaagaagata tgctgagtct gttttcgctg ccggtatttc
    13201 cagaaaagta ctggaaggat cacaaactta gcgacccgct cgccacgcct ccgcttgcca
    13261 gtggtccgta ccgcgttacg tcctggaaaa tggggcaaaa tattgtctat tcccgtgtga
    13321 aagattactg ggcagcaaac ttaccggtaa accgtggacg ctggaatttc gacaccattc
    13381 gctacgatta ttacctcgat gataatgtcg cctttgaagc gtttaaagca ggtgcctttg
    13441 atttgcgtat ggaaaacgac gctaaaaact gggccacgcg ttataccggt aaaaatttcg
    13501 ataaaaaata catcatcaaa gatgagcaaa agaacgaatc agcccaggat acgcgctggc
    13561 tggcgtttaa tatccaacgt ccggtattca gcgatcgccg ggtccgggaa gcaatcactc
    13621 tcgcctttga ctttgaatgg atgaacaagg cgttgtttta caacgcctgg agtcgcacga
    13681 acagttattt tcagaatacc gaatacgcgg ccagaaatta ccccgacgcc gcggagctgg
    13741 tgcttctggc accaatgaaa aaagatctac cgccagaagt cttcacacaa atctaccagc
    13801 cgccggtatc taaaggcgat ggctacgatc gtgacaacct gttaaaagcc gacacacttc
    13861 tcaacgaagc gggctgggtg ctgaagggtc agcaacgcgt taatgccaca acgggtcagc
    13921 aactcagctt tgaattattg cttcccgcaa gcagcaatag tcagtgggta ttgccgttcc
    13981 agcacagcct gcaacggctg ggtatcaaca tggacattcg caaggtggat aactcgcaaa
    14041 tcaccaaccg catgcgcagt cgcgactatg acatgatgcc gcgcctatgg cgggcgatgc
    14101 cgtggcccag ttccgattta cagatttcct ggtcatcgga atatatcaat tccacttata
    14161 atgcccccgg cgtgcaaagc ccggttatcg actcactgat caaccaaatt attgccgcgc
    14221 agggaaataa agaaaaatta ttgccgttgg ggcgagcact ggatcgcgta ttaacgtgga
    14281 attattacat gctgccaatg tggtacatgg cggaagaccg tctcgcctgg tgggataaat
    14341 tctcccaccc cgctgtacgc cctgtttaca gcctgggtat cgatacctgg tggtatgacg
    14401 ttaataaagc ggccaaactg ccgtcagcca ggcaacaggg agagtagatg ggcgcttacc
    14461 tgattcgccg tctgttgctg gtgatcccaa cattatgggc gattatcacc atcaactttt
    14521 tcatcgtgca aattgcgcct ggcggtccgg tcgaccaggc catcgccgcc attgagtttg
    14581 gtaatgccgg agtattaccc ggcgcaggcg gtgaaggtgt tcgtgccagc catgcgcaaa
    14641 cgggtgtcgg caatatcagc gacagtaatt accgtggcgg acgcggatta gatccagaag
    14701 tgatcgctga gatcactcat cgctacggtt ttgataagcc gatccacgaa cgttacttca
    14761 aaatgctctg ggactacatc cgctttgatt ttggtgatag cctgtttcgc agcgcctcgg
    14821 tgctgacgct gattaaagac agtctgccgg tttccatcac cctcggattg tggagcacgc
    14881 tgattatcta tctggtgtcg attccgttag gcattcgcaa agctgttcat aatgggagcc
    14941 gctttgacgt ctggagtagc gcatttatca ttatcggcta cgccattccg gcctttttgt
    15001 ttgccatcct gctgattgtc ttcttcgcgg gcggcagcta tttcgacctg ttccctctac
    15061 gcggcctggt ttccgctaac tttgattcgc tgccgtggta tcagaaaatc accgattatc
    15121 tgtggcatat cacgctgccg gtgctggcga cggtgattgg tggctttgcg gcgctgacca
    15181 tactgacaaa aaactcattc cttgatgaag tgcgcaagca atacgtggtg accgcgcgtg
    15241 cgaaaggggt aagtgaaaaa aatattctct ggaaacatgt gttccgcaac gccatgctgc
    15301 tggtgattgc cggttttccg gcgacgttta tcagcatgtt ttttaccggc tcgctgctga
    15361 ttgaggtgat gttttcactc aatggtctgg gcttactggg ctacgaagcg accgtctcgc
    15421 gcgattatcc tgtaatgttt ggtaccttgt atattttcac cctgattggc ctgctgctga
    15481 atattgtcag tgatatcagc tatacgctgg ttgatccgcg tattgatttt gagggacgtt
    15541 aatgtcgcga ctcagccccg tcaatcaggc ccgttgggcg cgttttcgtc ataaccgtcg
    15601 cggctactgg tcgttatgga ttttcctcgt cttgtttggt ttgagtttgt gttcagagct
    15661 tatcgccaac gataaaccat tgctggtacg ttatgacggc agttggtatt tcccgttgtt
    15721 gaaaaactac agcgaaagcg attttggcgg cccgctggca agtcaggctg attatcagga
    15781 cccgtggctg aaacaacggc tggaaaataa cggctgggta ctgtgggcac cgattcgctt
    15841 tggtgctacc agtatcaact ttgctaccga taagcccttc ccttctccac cctcccggca
    15901 aaactggctg ggaacggatg ccaacggcgg cgatgtgctg gcacgcattc tctatggcac
    15961 gcggatctcg gttctgtttg gcctgatgct gactctctgt tccagcgtga tgggcgtgct
    16021 ggcgggggcg ctacaaggct attacggcgg taaagtcgat ctctggggac aacgctttat
    16081 tgaagtatgg tcggggatgc cgacgctgtt tttgattatt ttactttcca gcgtcgtaca
    16141 gcctaacttc tggtggctgc tggcaattac tgtcttgttt ggctggatga gtctggtcgg
    16201 cgtggtgcgg gcggagtttt tacgtactcg taatttcgac tacattcgtg cggcgcaggc
    16261 gcttggcgtc agcgatcgca gtatcatcct gcgtcatatg ttgcctaatg ccatggtcgc
    16321 gaccctcacc tttttaccgt ttattttatg tagttcgatc accaccctga cctcactcga
    16381 tttcctcggc ttcggtctgc cgctcggttc accgtcactc ggtgaactgc tgttacaagg
    16441 gaaaaataac cttcaggctc cgtggcttgg gatcaccgcc ttcttgtcgg tggcgatatt
    16501 attgtctttg ctgatcttta ttggtgaagc cgtccgcgac gcatttgatc ctaataaggc
    16561 ggtgtagcat gacgcaaact ctgttagcga ttgaagattt gtcggtgggt tttcgccatc
    16621 agcaaaccgt acgtacagta gtcaatgatg tttcactaca gattgaggct ggcgaaacgc
    16681 tggcgctggt gggtgagtca ggttcaggca aaagcgttac cgcgctgtca attttacgcc
    16741 tgctcccttc cccgccggtt gaatatctct ccggcgatat tcgttttcgt ggcgaatcgc
    16801 tgcttcatgc cagcgatcaa acgttgcgcg gtgtacgcgg taataagatc gccatgattt
    16861 ttcaagagcc gatggtgtcg ttaaatccat tgcataccct ggaaaaacag ctttatgaag
    16921 tgctttcact ccaccgcggg atgcgtcggg aagcggctcg aggcgaaatt cttaactgcc
    16981 ttgatcgcgt tggtatccgc caggcggcaa aacggctgac agattatccg catcagctct
    17041 ccggcggcga acgccagcgg gtgatgattg cgatggcgct gttaacgcga ccggaattat
    17101 taattgccga tgaaccgacc accgcactgg acgtctctgt ccaggcgcag attttacagc
    17161 tgttgcgcga actgcaaggc gagctgaata tgggcatgct gtttattact cataacctca
    17221 gcattgtcag aaaactggcc caccgcgtgg cggtaatgca aaacggtcgc tgtgtcgagc
    17281 aaaattacgc cgctacgcta tttgcctcac ccactcatcc ttacacacaa aagctactca
    17341 acagtgaacc gtcaggcgat ccagtgccgt tgccagaacc tgcctcaacg ttgctggatg
    17401 ttgaacagct tcaggttgcc ttccccattc gcaaagggat tttgaagcgc attgtggatc
    17461 ataatgtggt ggtgaaaaac atcagtttta cgctacgagc gggtgaaaca ctgggtttag
    17521 tgggcgagtc cggttccggg aaaagtacga cgggactggc gctgctgcga ctgattaatt
    17581 ctcagggcag catcatcttt gacggtcagc cactgcaaaa tttaaatcgc cgccagctgt
    17641 tacctattcg tcatcgcatt caggtggtat ttcaggatcc aaactcctcg ctcaacccac
    17701 gactcaacgt tttgcagatt attgaggaag gcttacgggt tcaccagccg acgctttctg
    17761 ccgcacaacg cgaacaacaa gtgatagccg tgatgcatga agtgggatta gatcctgaaa
    17821 cacgccaccg ttatccggcg gagttctctg gtggtcagcg acaacgtatt gcaattgcca
    17881 gggcattaat tcttaagccc tcgctgatca tacttgatga accgacatca tcactcgaca
    17941 aaacggtaca ggcgcaaata ttgacgctat tgaaatcatt gcaacaaaag ctgcaactgg
    18001 cctatttgtt tatcagccac gatttgcacg ttgtccgcgc gttatgtcat caggttatcg
    18061 tactgcgaca aggggaagta gtggaacaag gaccgtgcgc gcgcgtgttt gccgcaccgc
    18121 agcaggagta tacgcgtcag ctactggcgt tgagctgacg cttaaaaagg attgtagttt
    18181 gaaaagggtt cggcaattgc cacaccaaaa tttttcaatc ggcatgttgc agcaaactcg
    18241 tcctggcgat ttacaaacag gcacggctca ccttcacact ccagcaccga acacggaact
    18301 tcgatgtcgc ttaacgcctg gcttagtttg tacatcaccg accatgcatt atcaccatcc
    18361 gggctaagca atttaagcgc caccaggctg ttgtcaccgc acggtccatt ttgcggaatc
    18421 ggttcaacct tcgaacctgc gaaaccagca gaccagcgaa agttctgcgg tagacgatgg
    18481 acgattgaga gttgtaatga agtcacttat tttccccgga agcacattta cttcacaatt
    18541 tgtttacatc aattttaaca catcatcaac aatccgtctt tatacagatc gtaaagattg
    18601 atgcctcgcc tgcgtggcct ctatggctct gatttaagta atatctgcgg gcgtggtcac
    18661 gtttgcgggg ctatatgtac ccgtttctgc gatctaactc aaccttttta actacaatga
    18721 tgtgactttt tacataaatt gattttacat aaaataaaca tatatcgggg gaatgataga
    18781 tttgtggttg acatgcatca acaaaggaag ccttttagct tcctcgttgt gcaatagatc
    18841 accgtttttt cggtcgactg gcgtacagac agaagagaat ggagctgctt gcgcagaatg
    18901 caattgacca aatcatcggc catgcagagt taaaggtcgc aagagaaagc aatgcgccaa
    18961 caattgcccc tatgccaaaa cggaaggttc ctgccagcga agatgccgtt cccgccatat
    19021 ggggaaactc atcaagaatg accgccatcg cattggatga caccatcgac acacagccca
    19081 caaacgccgc aacgccaacc accagaatcc cagccccagc agcgcactga tgaccatcca
    19141 cgctgccata ataaattgta tccacaaccc cgagcggaac atatttaacg cgccaatgcg
    19201 gcgaacgaag cggctgttaa agatggtcat cacgaacagg aaaacaatgt ttagtgcaaa
    19261 gtaataacca aagttttccg gcgcgacgtg gttaatttca atgtagacaa acggtccggc
    19321 gctcaggaac gagaacattc cggcaaagct gaaaccgctg gccagcatat aactcaggac
    19381 acgcttatga cggaacagcg ccgcaaagtt accaatagta gtacgaatgt gaaaaggctg
    19441 gcgacgctcc ggtggtaagg tttctttgat cagaaagaag atcattgccg aagccagaat
    19501 cgccgccacg gcgaggatcc agaagatgta atgccagctc agccacacca gcacccagcc
    19561 gccaactatc ggtgccatca gcggtgcaat ggtcgtcacc agcatgacaa acgacatcat
    19621 ccgcgagaac tcttctttcg ggtagatatc acgcatcaaa gcgttgataa ccatgctggc
    19681 cgcagccgca gccagcccgt ggaaaaaacg catcacaatc agctgatcga tggtttgtgc
    19741 caacgcacac gccaccgcgg cggcggcaaa caccagcgta ccgccgagca ccaccggctt
    19801 acgcccgaag ctgtctgcca tcggcccgta gattaactgc cccaacgcaa agcccagaat
    19861 ataagtactg agggtcatct gcgtactgcc cgccggtacg ccaaactgcg ctgaaattac
    19921 cggtagcgcg ggcagataca tatcaatcga cagcggcatc aacatggcca gcaggccaag
    19981 gataaaaaca atagcaaacg acgaatgctg tcgggtggtc acaacgggct cctgaaagtc
    20041 attgaaaagt tagacgacgc tggcaatttc ttcttcagtt aacggacgat attcaccggg
    20101 ggctaaatca gcatccagcg taataccgcc aatacgttca cgatgcagct caaccacgtg
    20161 gttacccacg gcggcgaaca tgcgtttcac ctgatgataa cgcccttcgc tgatggtcag
    20221 acgaacctgc gttggggtaa tcacttccag caccgcaggc ttagtgagat ctttttcgtt
    20281 atgcagctgc acgcctttag caaattgctc tgccgtatcg tcagctacag gtgattccag
    20341 tgtcaccaga taggtcttct cgcaatgatg gcgcggagaa gtaatgcggt gcgaccactg
    20401 accatcatca gtcatcagca ccagaccggt ggtatcgata tccagacgtc ctgcggcgtg
    20461 cagtttccag gctaccggtt catccagaaa atagagcacc gttgggtgat cagggtcgtc
    20521 cgtggagcaa acatagccct gaggcttatt gagcatgaag taacgtggac catgttgctg
    20581 cgccagcggg ttgccatcgt aagcgacatc atgttcagga agcagtttga acgctgcatt
    20641 acgaacaatt tcgccatcga cggtgacacg attgccgcgg atttcacgcc cggcaatagc
    20701 acggctaacg ccgagttgct gtgcgataaa tttatcaagt cgcatgtgtg tgattttgcc
    20761 tgtaaaaacg gaggtcgggc attgacccga aaatctgaac tgttgtctgc ccagtatagc
    20821 ggtctaataa catccctcaa gggaaaaaga tccatggcat actattagca gaataatcta
    20881 cctacgcgag accatgattt ttacactccg cccatatcag caagaagccg tggatgccac
    20941 gctcaaccat tttcgtcgtc ataaaacccc tgccgttatc gtgctgccca ccggcgcagg
    21001 taaaagcctg gtgattgccg aactggcacg gctggcgcgt ggtcgtgttc tggtgctggc
    21061 acacgtcaaa gaactggtgg cgcaaaacca tgcaaagtat caggcgctgg ggctggaagc
    21121 cgatattttt gccgctgggt taaagcgcaa agagagccac ggtaaagtgg tatttggcag
    21181 cgtgcagtcg gtcgctcgta atcttgatgc ctttcagggt gaattttcgc tgttgattgt
    21241 cgatgaatgc caccgtattg gtgacgatga agagagccag tatcagcaaa tcctcactca
    21301 cctgactaaa gtgaatcccc acttacgcct gctggggctg actgccacgc cttttcgatt
    21361 gggcaaaggc tggatctacc agttccatta tcacggcatg gtacgcggcg atgagaaagc
    21421 ccttttccgt gactgcattt atgagctgcc gctgcgttat atgattaaac acggctatct
    21481 gacgccgcca gaacgactgg atatgccagt agtgcaatac gatttcagcc gcttgcaggc
    21541 acagagtaac gggctgttca gcgaagctga tctcaaccgt gagctgaaaa aacagcaacg
    21601 cattacgcca catatcatca gccagatcat ggagttcgcc gaaaagcgca aaggggtaat
    21661 gattttcgcc gccaccgttg aacacgcaaa agagattgtg ggattactgc ctgccgaaga
    21721 tgcagcactg attactggcg acacccccgg cgctgagcgc gatgtgttaa ttgaagattt
    21781 taaagcccag cgttttcgct atctggtcaa cgtcgcggta ctgaccaccg gatttgacgc
    21841 cccgcacgtc gatcttatcg ccattctgcg tcctaccgaa tcagtgagtc tttaccaaca
    21901 aattgtcggg cgcggtctgc gtctcgctcc tggcaagact gattgcttaa ttcttgatta
    21961 tgcgggtaat cctcacgacc tctacgcgcc ggaagttggt acaccgaaag gcaaaagtga
    22021 caacgtcccg gtacaggttt tctgccctgc ctgcggtttt gccaacacct tttgggggaa
    22081 aacgaccgcc gacgggacat tgattgaaca ctttggtcgt cgctgtcagg gatggtttga
    22141 agatgacgac ggccatcgcg aacagtgtga cttccgtttc cgttttaaaa attgcccgca
    22201 atgtaacgcg gaaaacgata ttgccgcccg ccgctgccgc gaatgtgaca cggtactggt
    22261 tgatccggat gatatgttaa aagcggcgct acgactgaaa gacgcgctgg tattacgctg
    22321 tagcggcatg tctttacagc atgggcacga cgagaaaggc gaatggttga aaatcaccta
    22381 ttacgatgaa gacggcgcgg atgtgagtga gcgtttccgt ctgcaaacgc ccgcccagcg
    22441 aactgccttc gagcagcttt ttatccgccc gcatacgcgc acaccgggca tccctctgcg
    22501 ctggatcacc gccgccgata tcctcgccca gcaagcctta ctgcgacatc cggattttgt
    22561 cgtcgcccgc atgaaaggtc agtactggca ggtgcgtgaa aaagtgttcg attacgaagg
    22621 tcgttttcgt cgggcgcacg aattacgcgg ttaatggtag ttttgattga tgtataaggc
    22681 gattgagtat agaatctcgc ccgcttttgc atacgcaaag cagatcactt acctgttgct
    22741 gggtcgcctg tagcaggatt aatttaagag agaaagaaat gtttactatc aacgcagaag
    22801 tacgtaaaga gcagggtaag ggtgcgagcc gccgcctgcg tgccgctaac aagttcccgg
    22861 caatcatcta cggtggcaaa gaagcaccgc tggctatcga gctggatcac gacaaagtca
    22921 tgaacatgca agctaaagct gaattctaca gcgaagttct ggccatcgtt gttgacggta
    22981 aagaaatcaa agttaaagct caggacgtac agcgtcaccc gtacaaaccg aagctgcagc
    23041 acatcgactt cgttcgcgct taattgctga ataagttgta aaaaaccccg ctccggcggg
    23101 gttttttgta tctgcagatt atgcctgatt acggtattgc tattttttgc aggccagata
    23161 aggcgttcac gccgcatctg gcattcagaa tacaaaaccg attaattgcc gccagacgtc
    23221 cggcgctgca attggtcgcg caaattcggc ggcgtgcctt taatggtcaa ggtatcggtt
    23281 gctggatccc agaagatgcg ttcacctaac agcatcgcat caaagttaat agtcaagcca
    23341 ccgccgctac cggcaaactt cgtcaactga cgcagtgtgc tacggtctgc cgggaagctc
    23401 tcttccagtt cgtagccttt ttcagccgca aacttcgtga agctcacttc gcttacgcct
    23461 gccagctctt tcgacagcga ttccagttcg atctcttcgc ctgcctgcag ctgctcatta
    23521 cagtagctat aaacctgctg gcgcacgttc tgtcgctctg ctttatccag ttgtgcttcg
    23581 gcagtgaaat catcaaccgc ttgcaacagc ccacggtttt gcgctttcgc gttcaatcct
    23641 tcgctggccc cgaggaaatc cataaagaaa tccgccactt tgcgccctac tcgccctttc
    23701 aggaaagtga gatagcgggt ggactctgga ttggtttccc attcggttaa atcgatacgc
    23761 gcaacaatat ccgcatgatt gatatcaaga taatgggttg ggttgatgtc gagattttcg
    23821 ttaacgcgca tactgctcag gttgctcaga actgccacca gcagatactc caccgccaga
    23881 taacggtagt ggcaaaacag cacgaatcca ccgtcagcaa aaggatattt cgctaattcg
    23941 tcacgcaggc gcccggttgc cgcgcggcta aatgccagaa agtcctcttc gccctgacgc
    24001 tgtaagcgca gcgtctgcgc cagttcactc tcttcgctaa acaagccgta agctttattt
    24061 ttggcgctat agacccgatg cagttctgcc accatctcaa cgacggtttc tgtcggttcc
    24121 agcaatgaat cgcgcaacac cagctcaagg ttctgctcat cacgcttgat aagctggtgc
    24181 agagcaatct ggttgatatc cagactcatg ataaactctc ctttaagacc gggcggtatt
    24241 caaccaccgc cggttaagcg acgcaataaa atatggcggt cattttacag aaggcagcgt
    24301 aacgagaatg atttaacgca taaaaaagca gaaaaaaaac cgttgctacg gtaatatgtt
    24361 gccctttcat caactaactg atttcgattt atgccacaaa tttcccgcta cagtgatgaa
    24421 caggttgaac aattgctcgc agagctgctc aacgtactgg aaaaacataa ggctccgacc
    24481 gacctttccc tgatggtgtt aggcaacatg gtcactaacc ttatcaacac cagcattgcc
    24541 ccggcccaac gccaggcaat tgccaactct tttgcccgcg ccttacagtc ctctatcaac
    24601 gaagacaaag cgcactaagg gaaacagata acaggttatg gtaactcatc gtcagcgcta
    24661 ccgtgaaaaa gtctcccaga tggtcagttg ggggcactgg tttgcactgt tcaatattct
    24721 gctttcgctc gtcattggca gccgttacct gtttatcgcc gactggccga caacgcttgc
    24781 tggtcgcatt tattcctacg taagcattat cggccatttc agcttcctgg tgttcgccac
    24841 ctacttgctg atcctcttcc cgctgacctt tatcgtcggc tcccagaggc tgatgaggtt
    24901 tttgtccgtc attctggcaa cggcgggaat gacgctatta ctgatcgata gcgaagtctt
    24961 tactcgtttc catctccatc ttaatcccat cgtctggcag ttggttatca acccagacga
    25021 aaatgagatg gcgcgcgact ggcagctgat gttcatcagc gtgccggtta ttttattgct
    25081 tgaactggtg tttgcgacgt ggagctggca aaagctgcgc agcctgacgc gtcgtcgacg
    25141 cttcgcgcgc ccgctggccg cattcttatt tatcgccttt atcgcctcgc atgtggtgta
    25201 tatctgggcc gatgccaact tctatcgccc gatcaccatg cagcgcgcta acctgccgct
    25261 ttcgtacccg atgacggcgc gacgtttcct tgagaagcat ggcctgcttg atgcgcagga
    25321 gtatcaacgc cgtcttattg agcaaggtaa tccagacgcc gtttccgtac agtatccgtt
    25381 aagcgaactg cgctatcgcg atatgggcac cgggcagaat gtgctgttga ttactgtcga
    25441 tggcctgaac tactcacgct tcgagaagca gatgcctgcg ctggcaggtt ttgctgagca
    25501 aaatatttcg ttcacgcgcc atatgagctc cggcaacact acagacaacg gcatctttgg
    25561 cctgttctat ggcatctcgc cgagctatat ggacggcatt ctgtcgaccc gtacccctgc
    25621 ggcgttaatt actgcgctta atcagcaagg ctatcagctg ggattattct cgtcagatgg
    25681 ctttaccagt ccgctgtatc gccaggcatt gttgtcagat ttctcgatgc cgagcgtacg
    25741 cccccaatcc gacgagcaga ccgccacgca gtggatcaac tggctgggcc gctacgcaca
    25801 agaagataac cgctggttct cgtgggtctc tttcaatggc actaacattg acgacagcaa
    25861 tcagcaggca tttgcacgga aatatagccg ggcggcaggc aatgtcgatg accagatcaa
    25921 ccgcgtgctc aatgcactgc ttgattctgg caaactggac aatacggttg tgattatcac
    25981 tgccggtcgg ggtattccgc tgagcgaaga cgaagaaacc tttgactggt cccacggtca
    26041 tctgcaggtg ccattagtga ttcactggcc aggcacgccg gcgcagcgta ttaatgcgct
    26101 gactgatcat accgatctga tgacgacgct gatgcaacgc ctgctacatg tcagcacacc
    26161 tgccagcgaa tattcgcaag gtcaggattt gttcaaccct caacgccgtc attactgggt
    26221 cactgcagcg gataacgata cgctggcaat taccaccccg aaaaagacgc tggtgctgaa
    26281 caataacggt aaataccgca cttacaactt acgtggtgaa agagtgaaag atgaaaaacc
    26341 acagttaagt ttgttattgc aagtgctgac agacgagaag cgttttatcg ctaactgatt
    26401 aattataaat cagttagcga aatatcttac ttgcaatcgg tgtggaaaac ggtagtatta
    26461 gcagccacga gtcggcacgt agcgcagcct ggtagcgcac cgtcatgggg tgtcgggggt
    26521 cggaggttca aatcctctcg tgccgaccaa atcgcccacc ggataccacc ggaattaaca
    26581 gtttttagac acgaaaagcc cgctaatcct tgattagcgg gtttttttat ggtttttagt
    26641 caccggacat caccggattt ataagctatc agccggattt tttagttata cgcttagtta
    26701 tacgggcttg cgtataacta aagccgtata actaaaaccc tgttttttcg tgtggaatca
    26761 tatacatatg gcgagaaaaa cacccccatt aaccacggtg cagatcaaag cagccagacc
    26821 agcggaaaag gaatacaccc tacaggacgg cggagggctt tttctcctgg tcaaaccgtc
    26881 cggatcaaaa ctctggcgat tttcctacta ccggccatcg gacaaaaaaa gaatattgct
    26941 gagttttgga tcgcttgatg atgtttccct ggctgatgcc agaaaacgcc gtagcgagta
    27001 cagagcgtta atcagtgccg gaactgaccc gcagggccat gagaagaaaa aacgagaggc
    27061 agaggcccga agacaaggga acacgttcga aaatgtggcg gcggcatggt accaggtgaa
    27121 aatcagccag aatctggccc ccaacacgat taaagacatc tggcgttcgc tggataaata
    27181 tgtattcccg ttcatcggca acacgccaat agataccctc accgcccgaa ggttcgttga
    27241 agtgcttaca cccatcaagg agcgcggcaa cctggaaaca ctcaagcggg ttttacagcg
    27301 cgttaatgag gtaatggatt acgccgccaa cagtgggctg attgatgcca atccggctat
    27361 gaatgtgcgt aaggcgtttc cctcacctgt aaaaaaacat atgccaacaa tccgccccga
    27421 acagctgccg gagcttatgc aggctttatc agtatcggca acagaacggc agaccagatt
    27481 actgattgaa tggcagttac tgaccgtaac ccgtcccgcc gaagcgtcat caacgcggtg
    27541 ggatgaaatc aacctggacg cgaagcaatg gacgatacct gccggacgca tgaagatgcg
    27601 cagggatcac gttatcccgc tttccggtca ggctatggcg gtgctggagg ccatgaaacc
    27661 aatcagccac caccgcaatt acgttttccc aagtctgaaa gacccacagc agccgatgaa
    27721 cagccagaca gctaacgcag cattgcggcg tatgggattc gctggcgtgc tggtgtctca
    27781 tggattacgc gccatattca gcacagcagc gaacgaggaa ggattcgagc cggacgtaat
    27841 agaggcggca cttgcccacg tcgacaccaa cgaagttaga cgggcataca accggagcaa
    27901 ctacatagaa aaacgcatcg tgctgatgcg ctggtggggc gaatttgtcg aggctgcggc
    27961 gacgggcgta accctcgcca gtggtaaaag gggtatccga gccgtgtagc tgtacagaaa
    28021 accagtaaaa actacgaaaa ccatgtaaaa ccgtcgtata attgcatcaa atttaacgac
    28081 aaggccgtga aacatgaaac cgttaagatg caaaaaaata tcagatgcaa ttgcgacggg
    28141 ctgcaactgg ccctgatggt tcagcatgaa ttttggtcaa cctacgatcc ggaggacaga
    28201 acgacggccc catcaaaaaa acaggtagta gattttctgg tatcccgtgg cgcttccaga
    28261 aatctggcgg taagtattga taaggtcgta cgtccggcat ctatgaagat cggaggcagg
    28321 cccaaaaaat ggcggtaaca atcctggaag cggcagaaat gccgcttttt ttataattcc
    28381 atttcaaatc atcaatataa aaacggtgta taccgtttaa aaacggtggg aactgttttt
    28441 acccatatcc gatgatttac cgtatttgtc accggaatac accggattca caaggtaaat
    28501 cacgatggaa gcaatcagaa aaattatctt tcgccaggaa gtaaaaaaaa ttatccacat
    28561 caaggcagac agcacgctgc aaagcatgat caacgccgga gaatttccgc agggttttcg
    28621 cgttggttta cgccgtcgcg gatggtatga ggatgatgtg ttggcctggc agaaagaacg
    28681 cgaacaggaa gcacgcggaa cggctgctta acgggtatca cagatatgac aaacacgaaa
    28741 aaagcggccc cgatatggag ccgcctttct gaacaattaa cccgctgcgc cttatgtgta
    28801 tatgatccca aacataagca cggggatgat agccgctatc aggctggtgg gcaatgcaat
    28861 cagtctggtt cagttcgttg ccatacctgc aatgagcgct tttccctata ctctttaagg
    28921 aattgctcaa gggcaaaagc acatggtgcg aatctttctg attcatgctc tatctttctg
    28981 cgccgtcttt tccgtgccgg tgataatgtt ttggtcaatt ctttatcggt cattgtgttg
    29041 tcctgcatag caatgcgccg taatacctca caccacggcg ctgatagttt ttatcctttg
    29101 ggttctatgc cgcgccgctt tagttcagtg cgccccaact ctttaagcca gttggctagg
    29161 cttatgccgt cgctctgtgc ttctttgtcg aattgctctt ttagctctgg agaaattcgc
    29221 attctgaatt gtggggattg cccgtcccct ttagggcttt tatcgcgttt gattattgac
    29281 aagtggtcac ctattgaatt agcctttcca ttgttaggtg gccaccttaa cacaagagca
    29341 cttaaaaaag caaagccccg caagtgtcat taccactcgc agggcttcta accaacaacg
    29401 taaactagga gccgttatgg ttgccgtaaa tcatatacca caccttgtac acacacaaac
    29461 ggcctttgtg tggcgttttc tggccctgag tgccggagaa tctcaaatca tccacgtaac
    29521 cgcctggacg gaacgcgaag cgcgtagccg ttgcccgtcc ggttgtgttg ctgtattcgc
    29581 cgcccgtatt cgtcaggggg aaacctatgc acaataaaac cacaccgaac gcagcagccg
    29641 ccgcactcac tacgctgatg cacgcgctta ttgatattga atgcactgca gagcttgcgc
    29701 agggagaaga acagaaagac cggacacagt tcgccctgga atgtatccga tacatcgcaa
    29761 cgcggtcgct gaatgacgct aaaaatattc ttgttgctga ttgtgaaaat ggggggggtt
    29821 atgcgtgatg atcgttttaa ttccctgaaa caggaatttc ccggcgttcc tgatgatgcg
    29881 gctgatgcgc tttcgtcaat gccagaactt attagagcgg cttttttctt actttccacg
    29941 agagaatata aatcaacggg gcttgatgta ctgaatatcg ccgccgatta tgcggaatat
    30001 gtggcagagg cgcgttacag aagaaaattt cctgaggatg taagccatgc gtgatattta
    30061 ccacgaaaca atagaccgcg catttcttgc actttctcac agtgaaaaca tgctggaaat
    30121 att
//
LOCUS       DAJVUK010000032        29998 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.032, whole genome shotgun sequence.
ACCESSION   DAJVUK010000032 DAJVUK010000000
VERSION     DAJVUK010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29998
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.032"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..868)
                     /locus_tag="OQQ57_001366"
                     /pseudo
     CDS             complement(1..868)
                     /locus_tag="OQQ57_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310631.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
     gene            complement(843..1643)
                     /gene="otsB"
                     /locus_tag="OQQ57_001367"
                     /pseudo
     CDS             complement(843..1643)
                     /gene="otsB"
                     /locus_tag="OQQ57_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416411.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
     gene            complement(1810..2796)
                     /gene="araH"
                     /locus_tag="OQQ57_001368"
     CDS             complement(1810..2796)
                     /gene="araH"
                     /locus_tag="OQQ57_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter permease AraH"
                     /protein_id="HCS1956192.1"
                     /translation="MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPN
                     FATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESL
                     WIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDE
                     SFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVV
                     RTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKI
                     SYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            complement(2811..4325)
                     /gene="araG"
                     /locus_tag="OQQ57_001369"
     CDS             complement(2811..4325)
                     /gene="araG"
                     /locus_tag="OQQ57_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter ATP binding protein
                     AraG"
                     /protein_id="HCS1956193.1"
                     /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADQHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            complement(4395..5383)
                     /gene="araF"
                     /locus_tag="OQQ57_001370"
                     /pseudo
     CDS             complement(4395..5383)
                     /gene="araF"
                     /locus_tag="OQQ57_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416414.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein AraF"
     gene            6097..6600
                     /locus_tag="OQQ57_001371"
     CDS             6097..6600
                     /locus_tag="OQQ57_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HCS1956194.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            complement(6679..6930)
                     /locus_tag="OQQ57_001372"
     CDS             complement(6679..6930)
                     /locus_tag="OQQ57_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HCS1956195.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFSNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(7045..7131)
                     /gene="azuC"
                     /locus_tag="OQQ57_001373"
     CDS             complement(7045..7131)
                     /gene="azuC"
                     /locus_tag="OQQ57_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HCS1956196.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
     gene            7394..7717
                     /locus_tag="OQQ57_001374"
     CDS             7394..7717
                     /locus_tag="OQQ57_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecR-like lipofamily protein"
                     /protein_id="HCS1956197.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            7888..8385
                     /gene="ftnA"
                     /locus_tag="OQQ57_001375"
     CDS             7888..8385
                     /gene="ftnA"
                     /locus_tag="OQQ57_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HCS1956198.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQHLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(8423..8662)
                     /locus_tag="OQQ57_001376"
     CDS             complement(8423..8662)
                     /locus_tag="OQQ57_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HCS1956199.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH"
     gene            8853..10064
                     /gene="tyrP"
                     /locus_tag="OQQ57_001377"
     CDS             8853..10064
                     /gene="tyrP"
                     /locus_tag="OQQ57_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HCS1956200.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNVRKLRRVF
                     ITGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAGLLPEVR"
     gene            complement(10126..10791)
                     /gene="yecA"
                     /locus_tag="OQQ57_001378"
     CDS             complement(10126..10791)
                     /gene="yecA"
                     /locus_tag="OQQ57_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
                     /protein_id="HCS1956201.1"
                     /translation="MKTGPLNESELEWLDDILTKYNTNHAILDVAELDDLLTAVLSSP
                     QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG
                     LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
                     PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(10987..11073)
                     /locus_tag="OQQ57_001379"
     tRNA            complement(10987..11073)
                     /locus_tag="OQQ57_001379"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11037..11039),aa:Leu,seq:taa)
     gene            complement(11086..11159)
                     /locus_tag="OQQ57_001380"
     tRNA            complement(11086..11159)
                     /locus_tag="OQQ57_001380"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11125..11127),aa:Cys,seq:gca)
     gene            complement(11214..11289)
                     /locus_tag="OQQ57_001381"
     tRNA            complement(11214..11289)
                     /locus_tag="OQQ57_001381"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11254..11256),aa:Gly,seq:gcc)
     gene            complement(11441..11989)
                     /gene="pgsA"
                     /locus_tag="OQQ57_001382"
     CDS             complement(11441..11989)
                     /gene="pgsA"
                     /locus_tag="OQQ57_001382"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HCS1956202.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            complement(12046..13878)
                     /gene="uvrC"
                     /locus_tag="OQQ57_001383"
     CDS             complement(12046..13878)
                     /gene="uvrC"
                     /locus_tag="OQQ57_001383"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HCS1956203.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEDEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(13875..14531)
                     /gene="uvrY"
                     /locus_tag="OQQ57_001384"
     CDS             complement(13875..14531)
                     /gene="uvrY"
                     /locus_tag="OQQ57_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HCS1956204.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
     gene            14826..15002
                     /locus_tag="OQQ57_001385"
     CDS             14826..15002
                     /locus_tag="OQQ57_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956205.1"
                     /translation="MIKIFIGHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFTA
                     NFHCNMTRKINEYA"
     gene            14989..15213
                     /locus_tag="OQQ57_001386"
     CDS             14989..15213
                     /locus_tag="OQQ57_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HCS1956206.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(15280..16028)
                     /gene="sdiA"
                     /locus_tag="OQQ57_001387"
                     /pseudo
     CDS             complement(15280..16028)
                     /gene="sdiA"
                     /locus_tag="OQQ57_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
     gene            complement(16258..17010)
                     /gene="yecC"
                     /locus_tag="OQQ57_001388"
     CDS             complement(16258..17010)
                     /gene="yecC"
                     /locus_tag="OQQ57_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HCS1956207.1"
                     /translation="MSAIEVKNLVKKFQGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     LGRIVEQGAAKALFADPQQPRTRQFLEKFLLQ"
     gene            complement(17007..17675)
                     /gene="tcyL"
                     /locus_tag="OQQ57_001389"
     CDS             complement(17007..17675)
                     /gene="tcyL"
                     /locus_tag="OQQ57_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HCS1956208.1"
                     /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
                     LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPILSAMIGLSLNTAAY
                     AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
                     REPK"
     gene            complement(17690..18676)
                     /gene="dcyD"
                     /locus_tag="OQQ57_001390"
     CDS             complement(17690..18676)
                     /gene="dcyD"
                     /locus_tag="OQQ57_001390"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HCS1956209.1"
                     /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP
                     MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLNLFNTQIEMCDTLTDPNAQLEELATRVEAQGFRPYVIPVGG
                     SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV
                     TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA
                     RLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            complement(18781..19581)
                     /gene="tcyJ"
                     /locus_tag="OQQ57_001391"
     CDS             complement(18781..19581)
                     /gene="tcyJ"
                     /locus_tag="OQQ57_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1956210.1"
                     /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID
                     VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNY
                     EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA
                     FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK"
     gene            complement(19669..20220)
                     /gene="fliZ"
                     /locus_tag="OQQ57_001392"
     CDS             complement(19669..20220)
                     /gene="fliZ"
                     /locus_tag="OQQ57_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310687.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HCS1956211.1"
                     /translation="MMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIV
                     NKIEISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM
                     SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ
                     HYQRQTCTGLVQKSSSLPASDIY"
     gene            complement(20266..20985)
                     /gene="fliA"
                     /locus_tag="OQQ57_001393"
     CDS             complement(20266..20985)
                     /gene="fliA"
                     /locus_tag="OQQ57_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HCS1956212.1"
                     /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL
                     LQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ
                     AIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELV
                     TDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGE
                     SRVSQLHSQAIKRLSTKLGKL"
     gene            complement(21329..23011)
                     /locus_tag="OQQ57_001394"
     CDS             complement(21329..23011)
                     /locus_tag="OQQ57_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="HCS1956213.1"
                     /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
                     AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRILELTVQASTG
                     TNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
                     KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALS
                     RLKTGDTVTTTGSSAAIYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYT
                     RSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTG
                     SIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSA
                     TASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKF
                     AATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSIDKFRSSLGAIQNRLDSA
                     VTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQ"
     gene            23277..24683
                     /gene="fliD"
                     /locus_tag="OQQ57_001395"
     CDS             23277..24683
                     /gene="fliD"
                     /locus_tag="OQQ57_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HCS1956214.1"
                     /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
                     SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL
                     AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
                     KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
                     SVAAKNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK
                     DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
                     SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
                     NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKKQFTQLDVLMTSL
                     NSTSSYLTQQFENNSNSK"
     gene            24708..25118
                     /gene="fliS"
                     /locus_tag="OQQ57_001396"
     CDS             24708..25118
                     /gene="fliS"
                     /locus_tag="OQQ57_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HCS1956215.1"
                     /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARL
                     FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
                     NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV"
     gene            25118..25484
                     /gene="fliT"
                     /locus_tag="OQQ57_001397"
                     /pseudo
     CDS             25118..25484
                     /gene="fliT"
                     /locus_tag="OQQ57_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001015018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
     gene            25562..27049
                     /gene="amyA"
                     /locus_tag="OQQ57_001398"
     CDS             25562..27049
                     /gene="amyA"
                     /locus_tag="OQQ57_001398"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HCS1956216.1"
                     /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
                     YKGASGGYSVGYDSYNLFDLGEFDQKGSIPTKYGDKVQLLAAIDALKRNDIAVLLDVV
                     VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF
                     SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT
                     YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
                     PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
                     EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEYPGCVVVMSNGDDGEKTIHLG
                     ENYGNKTWRDFLGNRQESVITDEHGEATFFCNGGSVSVWVIEEVI"
     gene            complement(27083..27496)
                     /locus_tag="OQQ57_001399"
     CDS             complement(27083..27496)
                     /locus_tag="OQQ57_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1956217.1"
                     /translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
                     RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLALMSDDLTNVTVKRELYEVERD
                     GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
     gene            27683..28888
                     /gene="yedE"
                     /locus_tag="OQQ57_001400"
     CDS             27683..28888
                     /gene="yedE"
                     /locus_tag="OQQ57_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HCS1956218.1"
                     /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
                     QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
                     TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     APQTAKEIA"
     gene            28885..29118
                     /gene="yedF"
                     /locus_tag="OQQ57_001401"
     CDS             28885..29118
                     /gene="yedF"
                     /locus_tag="OQQ57_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HCS1956219.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
                     QSINNIPLDARNHGYTVRDIQQDGPTIRYLIQK"
     gene            29225..29896
                     /locus_tag="OQQ57_001402"
     CDS             29225..29896
                     /locus_tag="OQQ57_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HCS1956220.1"
                     /translation="MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKV
                     LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG
                     WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFEHGDEAEGFLIVTAAADQGLVDIH
                     DRRPLVLSPEAAQEWMRQEIGGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAEL
                     IQPVC"
BASE COUNT         7459 a         7704 c         7187 g         7648 t
ORIGIN      
        1 taacgaattt taccatgatg ctgcggatat ttttccagca acgcttcata ggcgagaaaa
       61 cgctctggca aacctttgga ataatccagc cgttcgacag aaaagatatt ttgtacgttt
      121 ttcagttccg ctttaagttg cgccagtttt ggcggcagtg gcccggcagc ctgtttggct
      181 atttctttcg gttcaatgcc gatcgggtag acttctgttc gaaatgcttt gccccaggct
      241 gtatggcttt ttgcgctacg tgtcgtgacg cgggtcaggt tagaaagaca atccaggaac
      301 gccagacgat cgttttctgt ctggaaaccc agcaaatcat aatcacaaag ctgttcaagc
      361 aaggtgtcat atgtcggcag cgcgttgaag atttccggtg tcgggaaagg aatatgcaga
      421 aagaaaccaa tgcgattatt caccccacgt ttgcgtaatt catgcgcaaa gggcaacagg
      481 tgataatcgt ggatccagat aatgtcatcg tcttgcaaca gcggcagtaa tttatctgcc
      541 agcaacgcat ttacgcgtag atagccgtcc caggcaggac gctgaaattg catcagatcg
      601 agccgataat gaaaagcggg ccagagaacg gcattggaga attggttgta gtattcgtca
      661 aggtcctgtt cgctgaggtt aaaagaggcc cacgtaatgt tacctttttt agcggctgat
      721 cctcattccc tgtttcacca ctccagccaa accacagtcc gcctgtggct ttcagtgccc
      781 ccagtatgcc aacggcaagg ccaccggcac tggcggcgtg ctcgtctggt ggtgcaatcc
      841 ggttagatac tacgactaaa cgactcatag tcatcactcc tgttattttc tcttttttgt
      901 tgtaatgcgg tggttatcat ttcaagcctg ctccagacat ccggcacacc cgccagtcgc
      961 catgatgcct gagttgcacc tgtgccaatt tttactgaca ttccgcccag tcggttaacg
     1021 actgcgaagc cagattcatc ggttaaatca tcgcccagaa atacgggcgt tcgcccgata
     1081 aagggagctt cctgcataaa agctgcaatt gcctcacctt tactggtacc tctcggtttg
     1141 atctcgacaa cacactttcc ctgctgtaac gccatttgtg gccagatctg agtaatacgt
     1201 tacgctaatg tcattaatgc gtcttcatgc tgcggagcct gacgataatg cagcgcaaaa
     1261 gccatccctt tcgcctccag ctccgcgccg ggatactgag cgataactgt atgcagttgc
     1321 acgctaatat cacgcgcaat cgcatccggc agatgaacga tatgcgtttt accattgatg
     1381 tcacggcgct ccgccccatg cacgcccgct aacgggaagc gataaggttt tgccagtgcg
     1441 tcaagctcca ccattgagcg ccctgatatc aatgccaatg caccatcact tgcggttgcc
     1501 agtagctgta gtccttgcag aatattgtca ggcacgacga cctgatcggg atgcggtttg
     1561 atttccgcca gcgttccatc gagatcaaaa aaccaggcat atttcgcgga tagttcaggg
     1621 gtttcggtta acggttctgt cacccggttc tcctacttct cttttcttat tgttttgcgc
     1681 agaacgcgct ttacagacat gtaagtatag acagtgtgac gggggtcgcc atttgcaacg
     1741 aagaacagcc aaccgttatg gcggttggct gtggtgggaa aaaacgctaa attgttgcag
     1801 aaaaaagcat cagacagtgc gtttcgcttt ttgcttgtaa cggtcgaaga tcaccgctgc
     1861 cagcaggatt aagccgcgaa ccacgtactg cgcgaaagga gaaatattaa gcaggttcat
     1921 ggcgttttcc acggtgccta aaattaagat acccgccacc acatatgaga tttttccgat
     1981 gcctcctttc agagaaacgc cacctaaaac gcaggcggag ataacaatca gctcgtaacc
     2041 aatcgacgtc attggctgcc cactggtcat acgtgaagcc agaataattc cggctatcgc
     2101 agataccagg ccagagagaa caaagataat aattttggtg cgaacaaccg gtacacccgc
     2161 cagacgcgca gcctcttcgt tcccgccaat cgccagggtg ttacgaccaa aggtggtttt
     2221 attcagcaac aaaccaaaga taatcagaca cgcgacggtg agccagattg gcgcaggcag
     2281 accgaaccag ttagcgtaac caagggcaaa gaagctttca tcttcgatac cgaccgcttt
     2341 accgtctgaa atgatgtacg ccagacctcg aacaatctgc atcgttgcca gtgttgtgat
     2401 cagagcattt attttcagtt tggcgataac aaagccattg accaggccac agagaatgcc
     2461 aagcagcaac cccgctgcca cgccaatcca caggctttca gtcaggttga taaccaccgc
     2521 cgtggtgaca cccgcacagg caattacgga ggcgacagaa aggtcaaagt caccggaagc
     2581 aaggcagaac aacatgccac acgccaccat ccccgacatg gaaattgcca ggcccaaccc
     2641 tttcatatta atgaaggtgg caaaatttgg gacaaaaatg gcacaggcga taaagagcac
     2701 cgcaaacacc accagcatgc cgtactgatc ccagatacgc ccgaagctga atgacgactt
     2761 aggtgcgcca gaacccgatg tagaaacaga agacatcata ctctccttac tcaggcaact
     2821 gcctggctga ctttaggcat cgcaaggctc agtgcctgac gctcatctgc ctgctcgtgt
     2881 aacaattcac cggcgatttc accttcccgc atcaccacaa tccggtcggc aacgccgagg
     2941 acttcaggta agtcgctgga ggcaaacagc accgccacac cctgcgccgc cagcgcataa
     3001 attacgttat atatttcgtg cttagcacca acatcaatgc cgcgcgtagg ttcatccagc
     3061 aaaatgacct tcatctcttc cgataaccag cggcccagaa tggctttttg ctgatttccg
     3121 cctgagagat tcatgatcag ttgctcagcg cccggcgttt tgatgttgag cgaacgaatg
     3181 tgctgatcgg cattgttttc ttcccaaccg ttgttgatta cacaaccgcc gagcacatgt
     3241 ttgcgtctgg cactgatgtt gatattgtcg cgaacggagt gcacgggaat aatgccttcc
     3301 gctttgcgat cttccgggca gagcatcatg cctgcggcaa tggcgtggct cggtttacga
     3361 atatcgatcg gctgttggtc gatataaacc tgaccggcgg tgatttgcgt cccgccaaac
     3421 aagcctttca ttaattcgct acgccccgcc cctaccagac caaacagccc aacaatttca
     3481 ccactgcgaa ccgccagact tattggcgta cgcacgcctg gtgctttcac agcatcaaga
     3541 cgcaggcgct cctcgccata actacgaggt tgccagccgt agatatcgcc aatgtcgcgc
     3601 ccgaccatcg cctgcaccag cgcgtcgtgg tcaacctgct gcatatcggt aaaggttttg
     3661 acataacgtc catctttaaa gacagtgatg gcatcgctga gggcaaatat ttcttccata
     3721 cggtgagaaa cgtataagat cacccgcccc tcttttcgca gttcacgaat aacgcggaaa
     3781 agattgtcga tttcgcgggc agaaagggag ctggttggct catcaaaggc gataatttta
     3841 gcgttacgcg ccagcgcctt ggcgatttca accatctgcc actgaccaat ggagagatat
     3901 ttcagcggcg tgtccgggtc aatatccata ccaagatgtt taagttgtaa acccgcctca
     3961 taattcagca atgagcgatt cacaatgccg cctttatgcg gcagctggcc gagatagatg
     4021 ttttccgcga cggtcatttc cggcacgaga tgcagttcct ggtaaataat cgccacaccc
     4081 gcgttaagtg ctgcggtcgt gtcggaaaag gacatttcct gcccattaat cactacagaa
     4141 cccgtggttg gcgcatagtt gccgctgagg atttttaaga gagttgattt tcctgcgcca
     4201 ttttcaccca tcaacgcatg aacctgaccg gcatagcagt caaaactaat atccgtcagc
     4261 gccttaacgc cgggaaacgt tttaccgatg ccgcgaaatg agagatacgg ggtagactgt
     4321 tgcataacgt ctccgtgaat cactggtcgt tcacaccccc tctgcatcat gcagagggga
     4381 atttttccgg caaattactt accgcctaaa ccttttttct ccagttcttc tttaaagttg
     4441 tcacgcgtga tcagcaccac gtcggtaact tcggtaaatt ttggcggttc aacgtctttt
     4501 gctacccagt tgtaaagcat ttcgctggat ttatagccat gtacgtccgg gcttggcagc
     4561 agggaaccgt agaagccggt tgcctgtact ttagacagtt cgctcaccgc atccacaccg
     4621 ttaatgccaa tgccgataat atcggcagct ttaaagccct gaccttccgt cgcgcgtacg
     4681 ccgcccagca cggtgctgtc gttcataccg acgatcagcc aatgtttaac ttcaggatgt
     4741 tgaaccagca ttgagttggc agcgtcaaat gcccccggga tgtcgttaga tttggtaggt
     4801 acctgataaa tttgtttttc cgggaatccg gccgctttca gcgcatccat agatcccgta
     4861 gtacggcggc gggcagtatc cagttcgttg gcggtaatca ccatcaccgc gctttctttg
     4921 acatcccagc cacgtttctg catctcttta tacagttcct gaccctgacg ttcgccaatt
     4981 ttagtcgcgc catcatcacc agcggaacgg tatccattgg cttacctttg gcgttaacaa
     5041 actgatcatc cacggcaatg actttcatat cgtagccacg cgctttcgcg acgatggcag
     5101 agccgagttt ggggtccgga gtacaaataa cgaaaccttt tgcgccactg gcagccaggc
     5161 tgtcgatcgc gttcaatgtt ttttcgccat ccggcacggc aatcttaata acctcaaacc
     5221 ctaaatcctt cccggcttta tcggcaaact tccattcggt ctggaagcac ggctcttccg
     5281 gttgcttcac cagaaaaccg agcttcaggt tctccgccat agcggattgt gacataacgg
     5341 ctgccagacc aatggctgcc agggctttag taaatttgtg catggttctc tccagcttta
     5401 gtgtcgtttt gtgtagggca aaaacgaatg acattcgtta aattaatcgg aaaacaaagc
     5461 attacctttt aactaaaaga taagtgaccg tgttgacata gttttagcga gaaattaatt
     5521 ctccatagga gagcaatatc acatcgcaga attacagtga gaacgtgcat aaatttagcg
     5581 ggaaaagaca taagggaaag ccaatttgtc agacaaattg tcgaatgcac agcagattaa
     5641 tccataagat tagcttggaa atccttgttg tctttggtac ccatgcggga tgtcttcttt
     5701 ttaaccagtc aataggccgc attacctggc gttgagtttt tgaaatggtg taataaccgc
     5761 aactcaaaga tgtggaaaat gcacgtcatt catttcgcca ttaattatca ctgtgctcat
     5821 taattaacag aacacgtata atgagagcca tctcgcaaaa atgaaaaaac gttttataaa
     5881 atcatcattt catcaatgaa atgtaaaaat atataaactt gatgatttaa gcattttctt
     5941 atacccgttc agacgttatt cttatttcag atcatcgtca gaattgactc cacgatcaca
     6001 tttcggaccg gcagaaagga attattctgc aaacagtaat tatggtgttt tgatttatct
     6061 tgcacctctc cacttctgga tataaggata ttaggtatgg caaccgctgg aatgcttctc
     6121 aaactcaact ctcaaatgaa ccgcgagttt tacgcatcca atctctacct tcacctgagt
     6181 aactggtgtt ctgaacagag tctgaacggc accgccactt tccttcgcgc ccaggcacag
     6241 agtaatgtga cccaaatgat gcgcatgttt aactttatga agagtgtcgg cgctaccccc
     6301 atcgttaaag ccattgatgt tcccggtgaa aaactgaact ctctggaaga actgttccaa
     6361 aaaacgatgg aagaatacga gcaacgttct agtacgttgg cacagttagc cgatgaagcg
     6421 aaagaactga atgatgattc aaccgtcaat ttcctgcgcg atctggaaaa agaacagcag
     6481 catgatggtc tgttgctgca aaccattctt gatgaagtgc gcagtgcgaa acttgctggt
     6541 atgtgcccag tgcagaccga ccaacatgtt ctgaatgtcg tgtcgcatca gctgcattga
     6601 tcatacatcg gcgctaatgc attgcgccga tgaagttttt gagaaaccgc tgcctcatct
     6661 ttttgaagca gcggtttttt aatgggattc gccttgtggg gtaaacttga gttcaatcag
     6721 cgcgatggct ttttggattg cccgcatggt gaccgggtct gcggcggcgg gatggttact
     6781 aaagtcgata ttcttcagct gactggacat tttttcacga acttcaacgg gcgcgattac
     6841 atcgagaaca tccagaattt gtttgataac caactggcaa gcaaccacat cagaaaccag
     6901 ttcctgatcg gcattcagcg gctgggacat cgtaaactcc tgatagcatt ttgaaagccg
     6961 ttatagtagc ggcttcacat cttcagcgat agtcacatcc accgtcatca ggacacaaaa
     7021 aaacctgccg gagcaggttt tttgttatcg gaacatattg cctggcggta cgtctttgaa
     7081 cgtcttgcaa tagttattga acatactttt caggattttg cgcagtttca tcgcggcact
     7141 ccgaccattt gttatacatg tgttattttc tttgtgctta taatatgaca accatcacaa
     7201 aaatcaatct ttatgtgatg caaatcacac aaataccccc ttaatgttat aaaaatgata
     7261 atcaaaaaac agccccccca tttctgacac ctacagatgg caagaaatag cgcctgccag
     7321 gcgtcttttc cggtcattgt cgcagcgctg taacgcgtaa aatagtgctt tcttttactc
     7381 ttctggctgg accatgagac ttctgattct gactctttca ttaataacgc tggcggggtg
     7441 tacggttact cgccaggccc atgtgagcga agttgacgcg gcaacaggta ttgtacggtt
     7501 ggtttatgac caggcttttt tgcagcatgc ccataccgat cgttatgtca gtcgcgggat
     7561 cgccgatcgc gcatgccagc aggaaggcta tacccacgcg atcccctttg gtcagccagt
     7621 aggcaactgt agcctttttg cgggttcctt atgtttgaat acggaattca ctttgtcata
     7681 tcagtgccat cattccgcct tccctgtctt tctctaaata ttttaatcag cgaggggatc
     7741 ttcgctgatt aaaaaaatag cggtaatgcg ttttattccc attcgtattt ttaataattg
     7801 aagtttatat tttacctttt gcaaataata aaataacaaa ttatagtgac gccacagcaa
     7861 caaatataac ctttgtggag cactatcatg ctgaaaccag aaatgattga aaaacttaat
     7921 gagcagatga acctggaact gtactcttca ctgctttatc agcaaatgag cgcctggtgc
     7981 agctatcata ccttcgaagg tgctgccgcg ttcctgcgcc gtcacgccca agaagagatg
     8041 acgcatatgc agcatctgtt tgattacctg actgataccg gcaatttacc gcgtattaat
     8101 accgttgaat ctccgtttgc tgaatattcc tcacttgatg aattattcca ggaaacctat
     8161 aaacacgaac aattaatcac ccagaaaatt aacgaactgg ctcatgctgc aatgaccaat
     8221 caggactacc caacatttaa tttcctgcaa tggtatgttt ctgagcagca tgaagaagag
     8281 aaactgttca aatcgattat tgataaatta agcctggcag gcaaaagcgg cgaaggtctg
     8341 tattttatcg acaaagaact ctctaccctc gacacacaaa actaatactc tccggcggca
     8401 ggtttactgc cgccgtttca aatcagtgac ggcaaatctt actctgatcg gtcgaaaaac
     8461 cgtctttcga aggtataaat ttgccttttg ctgccagaaa cgctaccagc tctcccgctg
     8521 tcatcccttc tgccgagcag gtgtgaaaac gtgcctgttc accaaaacgc gctttaattg
     8581 ctgcttccag actggcatgc gtatattgct cgcctgattc aatcatcata tttaacactt
     8641 catgaccgtg aatagagtcc atcgttcctc ctcaaaaaaa gcctagcgta gcgattgccg
     8701 cttatgaaga ctttgcgcca gagcagaact gaatgctttt tattgtacat ttatatttac
     8761 accatatgta acgtcggttt gacgaagcag ccgttatgcc ttaacctgcg ccgcagatat
     8821 cactcataaa gatcgtcagg acagaagaaa gcgtgaaaaa cagaactctg ggaagtgttt
     8881 ttatcgtggc gggaaccaca attggcgcag gcatgctggc aatgccgctg gctgcggcag
     8941 gtgttggttt tagcgtcacg ttaatcttgt tgattgggct ttgggcgttg atgtgctaca
     9001 cggcgctatt actgctggag gtgtaccagc atgttccggc agataccggt ctgggcacgc
     9061 tggcaaaacg ctatctggga cgctacggtc aatggctgac gggcttcagt atgatgttct
     9121 taatgtatgc tctgactgcg gcatacatca gcggtgccgg tgaattgttg gcctccagca
     9181 tcagcgactg gacaggtatt tcaatgtcgg caaccgctgg cgtgctgttg ttcacttttg
     9241 ttgccggtgg cgtggtttgt gttggaacat cgctggtcga tttatttaac cgttttctgt
     9301 tcagcgccaa aattattttt ctggtggtga tgctggtatt gctgctaccg catattcaca
     9361 aagtgaatct tttaaccctg ccgttgcaac aggggctggc tctgtcagca atcccggtga
     9421 tttttacctc atttggtttt cacggtagcg tgccgagtat tgtcagctat atggatggca
     9481 acgttcgtaa gctacgcagg gtgtttataa ccggtagtgc gatccccctg gtggcatata
     9541 ttttctggca ggtggcaacg cttggcagca ttgattcaac aacctttatg ggattgctgg
     9601 ctaatcatgc tggattaaac gggctgttac aggcgttacg cgaaatggtg gcctctccgc
     9661 atgttgagct ggcagtgcat ttatttgctg atttagccct cgccacgtca tttctcggcg
     9721 ttgcgttagg cttatttgat tatctggctg atttatttca gcgttcaaat accgttggtg
     9781 gacggttgca aactggtgca attacctttc tgccgccgtt ggcgtttgca ctgttttatc
     9841 cacgaggatt tgtgatggcg ctgggttacg ccggtgtggc gctggcggta ctggcattga
     9901 ttatcccttc gctgttgacc tggcaaagca gaaagcacaa tcctcaggcg ggttaccggg
     9961 tcaaaggtgg tcgtccggcg ctggtggtgg tgtttctctg tggtattgct gtgattggcg
    10021 tgcaattttt gattgcggca gggttgttac cagaagtgag gtgatcagat agcctcaaat
    10081 tccttattgg gtgccagaat taacgctgac acccaatttg gcctcttaat gcaggcagca
    10141 ctgcttaaat ttcttaccac taccgcacgg gcaaggatcg ttacgccccg gtttctcttc
    10201 tgctttgatc ggttgctgaa cagctttttc ctgcggatgc gccatccagt acgcatgtag
    10261 atcaagcgcc gccagtcgaa tggcatctac gctctcttca aacgcttctg gcgacatctt
    10321 ttctacccgc tcgaagtttt cctcagtacc gtgcagcgca atcgcctcca gcgctggttt
    10381 taacgaatcg ggcaacgttg accagtcaga aagtgccacg ccccgcatat agccaaagca
    10441 ccactcctca acaatcgtca gctcgctgcc atcaacttct cgcaagccga ataacggctc
    10501 aaactgctcc gggaattcgt tcagacgctc tgcggtatcg gccatatgtt gaaaagccaa
    10561 gttcataaag cgcgtcatct ctttctctga cgcccagcgc ggcacatagt cagccccacc
    10621 ccacacggca accagccact gttccggttc aatctcttgc ggagaactca acaccgccgt
    10681 caataaatcg tccagctccg ccacatcaag gatggcgtgg ttagtgttgt atttggtcag
    10741 aatatcgtcc agccattcca actcactttc gtttaacggt cccgttttca tacgcttttc
    10801 cttgtggatc tcaactcgcc agcacctatc ttacatgccg gtccgtatca gagatacttt
    10861 ttgagtggct ttgccggtga ttaaaaatta aggagggtgt aacgacaagt tgcaggcaca
    10921 aaaaaaccac ccgaaggtgg tttcacgaca ctgcttattg ctttgatttt attcttatct
    10981 ttcccatggt acccggagcg ggacttgaac ccgcacagcg cgaacgccga gggattttaa
    11041 atcccttgtg tctaccgatt ccaccatccg ggctcgggaa gaaagtggag gcgcgttccg
    11101 gagtcgaacc ggactagacg gatttgcaat ccgctacata accgctttgt taacgcgcca
    11161 aattcttcag gcctttcagc cagacatccg cttgacgccg atgtctttta aactggagcg
    11221 ggaaacgaga ctcgaactcg cgaccccgac cttggcaagg tcgtgctcta ccaactgagc
    11281 tattcccgca ttcattaagc aatcagttaa tcacttgatt ttattatcgt ctggcaatca
    11341 gtgccgccgt tcgatgcgtt gcattctact tacctggcgc gatgagtcaa cgatattttt
    11401 caccactttt gatcgtttgc tgaaaattac gccgaaacga tcactgatca agcaaatctg
    11461 cacgcgcagc gctcaaatat tgcaacattg accacagagt cagcaccgca gccacaaaga
    11521 aaagtgcaat accggcgtac tcaacccaaa tgttcggacg ccacagcagc caggccaacg
    11581 ccaccatctg ggcagtggtt ttcactttcc caatccagga gacagccacg ctactgcgtt
    11641 tacccaactc cgccatccat tcgcgtagcg cagaaataat aatttcacgg gcgatcatcg
    11701 ttgccgccgg tagggtcacc caccagctgt gataatgctc ggttaccagc accatggcga
    11761 tagccacgag aactttatct gctacagggt caaggaaagc accaaaccgg gtactctggt
    11821 tccagcggcg tgccagaaaa ccatcgaacc agtcagtcac cgccgcgacg cagaaaatga
    11881 gcgcggcggc aaacggcgac caggtgacag gcagataaaa gaccaataca aagaatggga
    11941 taaggatgac acggaacagt gtaagcaacg tagggatatt aaattgcata atgacgggta
    12001 actatctgtt gtcagtaaga ttacccctat gttgctacag agacatcaat gtttcaacga
    12061 ccagaagatc ttttctgcca gaccttgcga aatacccggc acttttgcaa tttcctcgac
    12121 gctggcgtta cgtaaacctt gcaaaccgcc catatatttc aacaacattt gccgacgttt
    12181 tggcccgacg ccttcaatgg tttccaggga actggtattt ttgaccttcg cccgtttttt
    12241 acggtgcccg ccaatcgcgt gatcatgtga ttcatcgcga atatgctgga taacatgcag
    12301 cgcgggtgaa tctggcggca aactaaatcc ctcatcttcc ggctcaaaga acagcgtttc
    12361 cagtccagcc ttacgatctg ctcctttggc aacgccaagt agcagcggat gatttttatc
    12421 ccatgagaca tccagttcgg cgaagacatt tttcgcctgc gcaagctggc ctttgccgcc
    12481 gtcgataagg atcacatccg ggatcttact gtcgtcaatg gctttaccat aacgccgacg
    12541 cagcacctga ttcatcgccg cataatcatc gcccggcgtg atgcctgtaa tgttatagcg
    12601 ccgatactcc gcacgcagcg ggccgttagc atcaaacacc acacaggaag cgacggtttg
    12661 ttcgcccatg gtatggctga tgtcaaagca ctccatccgc ttcacttccg gcaatttcaa
    12721 cacgctggca agcgcggtca gtcgctggtg aacggtagat tgctgcgaaa gtttgctggt
    12781 taaggccgtc gccgcattgg tgcgcgcgag tttcagataa cgcgccctat cgccgcgagg
    12841 tttggtttga acattaatct tgcgtcccgc cagttctgaa agggaatcgg cgagcagcgt
    12901 tttatcgcta agattaaaat cgagcaggat ctcacccggt aaggtgcgca tctggctgcc
    12961 ttgtaaatag aactgaccta cgaaggtttc taccacctcg ctcagttccg taccgccagg
    13021 cactttcggg aaatagctgc ggctgccgag cactttgccc tgacgaatga acaatacgtg
    13081 gacacaagcc atgcccgcat cgaacgccac accaataacg tcaaggtcgt cgccggtatt
    13141 ggaaacaaac tgtttttcgg tgacgcgtcg caccgcctga atttggtcgc gaatacgtgc
    13201 cgcttcttca aactccagat tctgactggc agtttccata cggctaatga gttgcgtaag
    13261 cacctgatca tctttgccag acaaaaacag gcgcacatac tcgacctgct gagcgtattc
    13321 ttcttcactc accagtcctt caacgcacgg tcccagacag cgccctatct gatattgcag
    13381 acacggacgc gagcgattgc gataaacact attttcgcac tggcgaatgg ggaaaatctt
    13441 ttgcagtagc gccagagttt cacgtacggc atagccattc gggaacgggc cgaaatattc
    13501 acctttggca tgcttcgcac cacgatgcat cgccagacgc gggtgggtat cgccactcag
    13561 gaagataaaa ggataagatt tatcatcgcg tagcaaaacg ttgtaacgcg gctgatagag
    13621 tttgatgtag ttgtgttcca gcaacagcgc ttcggtttct gtatgagtaa ccgttacatc
    13681 aatttgctga atctgggcga ccagcgcttc ggttttgcgc gaagcgaggt tgctacggaa
    13741 atagctggaa agccgttttt tcaggtcttt cgctttgccg acatagataa ccgtaccacc
    13801 agcatcgtac atgcgataaa cgcctggctg gctggttacg gtttttaaaa acgcttttgc
    13861 gtcaaactga tcactcactg acttgataat gtctccgcat tacacagacc atggcgaatt
    13921 gccaggtgag tcagctcaac atcgccatga atgtttagtt tactgaacat acgatagcgg
    13981 tagctgttca ccgttttcgg actgagattg agctgttctg agatctcatt gaccttctgg
    14041 cccttggtga tcatcagcat aatctgcaat tcacgttcag acaaactggc aaatgggctt
    14101 tctgtttttt ctggttcgat ctggcttaac gccatttgtt gagcgatgtc agaagcaatg
    14161 taacgctgcc ctgaatagac agaacgaatc gcactcacga cttcctgcgg agccgcgcct
    14221 ttgctgaggt agcccgcagc accggcctgc atgactttcg ctggtaaagg gttttctgta
    14281 tgaacggtaa gcatgatgat tttgacatca gctgtggaac gcgcgatttt acgcgtcgcc
    14341 tcaagaccgc caatgcccgg catactcatg tccattagca ccacgtcaac ggcatttgtc
    14401 cggcaccact taacggcgtc ttcaccgcac gatgcctcac cgacgacttt tatacccttt
    14461 atatcttcca gaatgcgtcg tatccctgcg cgcaccagtt cgtggtcatc aacaagtaga
    14521 acgttgatca aagaaatatc tccagaaata gggataacgc tactgatagt tagtcattcg
    14581 tatattagcg gtttttattg caactttgaa acgttaaaaa tggtgggtat tcgatttttc
    14641 tctcgttttt gtcaattcga ttgtccacag ttatggtcac gcccgtcacc aacggcttac
    14701 cggatcgttt cacagtaagc cctacgatga aatgtgacaa aaattgactt tattcagcaa
    14761 aaatgaaaat cagcccgctg aatatgtaac attaattaac ccgaacaata cgggcaaaaa
    14821 cattcatgat aaaaatattt attggtcatt atattaacgt attttatagc actgccgata
    14881 tcacgctcaa aaaacaacca ctgctatttt tagcaaagct tatggtatac tccgccgcct
    14941 taacattttt caccgcaaat tttcattgca acatgacgag gaaaataaat gagtacgcct
    15001 gatttttcta ctgccgagaa taatcaagaa ctggcaaatg aagtctcctg cctgaaagcg
    15061 atgctgacgc tgatgctgca ggcgatggga caagctgacg cgggccgcgt gatgttaaag
    15121 atggaaaaac agcttgcgct gatcgaagac gaaacccagg ctgcagtatt ttccaaaacg
    15181 gttaagcaaa ttaaacaagc ctaccgtcag taatataaaa ccggctgaga gcgtgccttt
    15241 cagccggttt ttgcatctgg cacgcagaaa gaaaagcgat caaattaagc cagtagcggc
    15301 cgcgtaacag gccacctggg tcttatttgg tgcattgatt tttttctgca tgtttttctg
    15361 atggaaattg accgtattct cagagattga caaaatcatc gctatctctg ctgatgtctt
    15421 cccttccgcc gtccatttca gaatttcttt ttcgcgcttg ctgaaattca tctctggcgt
    15481 catcactatt tcatcattta aacgcatcag agccatcaga ctttcgcgca ccagtaactg
    15541 catttttaat tgcagttcat cactaagaat gggtatttcg cgcgtgctgc aacgggaaaa
    15601 ggacaaaaag cccagcgccc gatttggcag cattaaatac tgagtgacac cgcggcgtaa
    15661 accatgtgcg tgcgcggctt cccataatgg ctgtgcttcg ctgaataagt catcattcca
    15721 cattaaatgg ccctgactaa agttttcagg gttcagcaca ggatcaattg cgagaaaatt
    15781 agcacaggat caattgcgag aaaatttttt gcctgataat aactaaccca cgactcaggg
    15841 taattggtgt agaaagccac tttaggtcgc gtgaatggta ccgggtggcg aacacataac
    15901 gaatagtaat cgtactccag ctgctgagcc tgaagctcta tttcatggta gacctcttct
    15961 gcgacctcca tcctctgaaa acgcaacagc atcgtgcgac gccaactgaa aaaatccgta
    16021 tcctgcatag taaaccgcaa cgcccctgag agtgagtatc atttataatg ataattcaaa
    16081 ctatcacata aataagattt atatataatt tatattattc aggcaatgaa ttacttttgc
    16141 aagccatcgc attctcttat gttattaatg agttatgctg atttgttaag cagttttatc
    16201 acgcttgaaa tggcgtcccg ccccgacagg tgaatcgtcg gggctgattt tttcttatta
    16261 ttgcagcaga aacttctcga ggaactgtcg ggtgcgaggc tgctggggat cggcaaataa
    16321 cgcttttgct gccccctgct cgactatccg ccccaggtcc ataaaaatcg cccggtccgc
    16381 aacatcccgg gcaaagctca tttcgtgcgt cacaatcacc atcgtgcgct tttcctgcgc
    16441 cagctggcgg attgtgttca ggacttcgcc caccagctct ggatccagcg ctgacgttgg
    16501 ctcgtcaaac aaaatcacct caggacgcat tgccagcgca cgcgcaatcg ctacacgctg
    16561 ctgttgaccg ccagacaaac gacgtggata gctggtttct ttaccggcca gcccaacttt
    16621 cgccagcagc tcgcgagcgc gcgccgtggc ctcttctttc ggttcgcctt tgacgatcac
    16681 cggcccttca ataatgtttt ccagcaccgt acgatgcgga aacaaattaa agttctggaa
    16741 gacaaacccg acgtgctgac gcaactggcg aatcagcgat ttttgctgac ttaatgaacg
    16801 tgcagtatca atagtgatat cgccaacggt gatcgttccc gcttccggtt gttccagcag
    16861 atttatgctg cgtagcaacg tggttttgcc ggaaccactc ggaccgataa ttgccaccac
    16921 ttcgccaggc tttacctcga ggtcgatacc gtgcagcacc gtctgacctt ggaatttttt
    16981 caccaggttc ttaacttcaa tggcactcat ttgggttctc tctcctggcg attaagttga
    17041 ttctcaaaat ggttctgcaa cgtcgataac acagtcgcca tgatccagta gatgagcgaa
    17101 gccgccaggt acatggtgaa cacctccagc gtgcgcgagg taatcaactg cgcctgacgg
    17161 aacagctccg gcacctggat tgtcgcggcc agcgacgtat cttttaccag actgataaag
    17221 ctgttcgaca gcggcggcaa cgccacccgc gccgcctgtg gcaaaatcgc gcgacgcatg
    17281 gtctgccacg gcgtcatacc aatactggca gcggcttccc actgaccttt atcaatagaa
    17341 gaaatggcgg cgcgcagcgt ttcggcggca taggcggcag tgttcagcga cagaccaatc
    17401 attgctgaca gaatgggatc taattcgata ccaaactgcg gcaggccgta atagatcata
    17461 aacagttgtg cgatgagcgg cgtaccacga aaaatagaga tataaaaacg cgccagccag
    17521 cgcacgggcc agattggcga caggcgcatc agcgcgagaa taaacccgag tagtaagcca
    17581 aaaaacatgc cgccgatact gagttgcagg gtatacccag cccctttcaa caggaacggc
    17641 aaggaatcaa taaccagttg tatactttct tgcatgagcg ttcccggagc taaacgtggg
    17701 gatgataggc gaacagcgca ggcgcgccgc cggtatgaat aaacagaatc ggcccttcat
    17761 ctttgaagcg tttctgactg ataccgtcaa tcagccccgc catcgctttt ccggtataca
    17821 caggatcaag cagaatgcct tccagacgcg ccagcaattt cactgcttcc atgccttcgt
    17881 cgttcggcac gccgtagcca ggtgcaaaat agtcatccca gagtaaaatt tccgctgatg
    17941 cggtcagctc cagttctttc gcaatcgcct gttgtaggtt aaccactttc ggcaattgat
    18001 cggcaacgga acgcgacacg gtcacgccaa tcagttcgct ttcaggcatc aggtgttcca
    18061 gcccaacagc caatccggcg tgagttccgg cactgcccga tgcgaccacc accgacgaaa
    18121 tattaaccgc cccttcacac tgttgcgcga tttccagcgc actctccaca taacccagcg
    18181 cgcccagagc attagaaccg ccaaccggaa tgacatacgg gcgaaagcct tgtgcttcga
    18241 ctcgcgtcgc cagctcttcc agttgggcat tgggatcggt cagtgtgtcg cacatttcaa
    18301 tctgggtatt gaacagattc agcaacaaac gattgccgtt ggttaaatag ttttctgcgg
    18361 ttgtgccaat aggattttcc agcagcgcca cgcagtgcag gccgagtttc gccgcaactg
    18421 cggcagtctg ccgcacatgg ttagactgga tcgcgccggc agtaatcagc gtatcggcac
    18481 cttcgcgcag ggcatctgcc gcgagaaatt ccagcttacg taatttattg ccgcccattg
    18541 ccatgggtgt gacgtcatcc cgtttgatga aaatttcccg tccaagataa tcagaaaagc
    18601 gcggcagata ttcgagcggc gttggcgcgc cgataaactc cagccgtgga aaacgggtta
    18661 aattatgcag tggcataata gcctccgatg tgtgttgttg tgattttctt attatgcacg
    18721 ctgaaaacgc gtaaataaaa aaggcgctag tgaaagcgcc cttttttgtc attatgctga
    18781 ttatttggtc acatcagcac caaaccattt ttcggaaagg gcttgcagag tgccatcttt
    18841 ttgcatttcc gcaattgcat cgttcactgc tttcagcagg tcttcatttc ctttacgcag
    18901 cgccacgcca gactcctgac gggagaatgc ttcaccggtt actgccagcg tatcgttggt
    18961 tttcttcacc agatccagcg ccgccagacg gtcaacgagg atcgcatcga tacggcctac
    19021 gcgcagatcc tgatatttgg tcgggtcatc atcataggta cgcacatcga cgccctgaac
    19081 attctgccgc agccactctt catagttggt gcccagaccg acacccactt ttttgccttt
    19141 cagatcagca gccgttttaa tggtgccttc gttacctttt ttcaccagcg cctgaatacc
    19201 agaaatggtg tacggggtag agaaatcgta ttttttcttg cgctcatcag aaatggtgac
    19261 ctgattaatc accacatcaa tacgtttaga gtccagcgac gctagcatac cgtcccattt
    19321 ggtcggtttt agtgacgcct caacgccaag atgttttgcc agctgttggg caaattccac
    19381 ttcaaaaccg gttaatttgc cgtcatcccc ctgaaaactg aacggcggat aagttccttc
    19441 cagccctacc agtagcgtac cgcgctcttt gactttatta agcagacctt catctgcaaa
    19501 acttttaacg ctcatgcccg caaccagcgc cacggccatc acacccatca atgcctgacg
    19561 tcccagatgt gctaatttca tattcacccc gaatgttgtt atgtctgttt gcagtgtaga
    19621 gccattgttt gtaaacacaa aaacaactcc gctacatctt attcttattt aatatatatc
    19681 agaagcaggc aggctggagg atttctgcac aagtccggta cacgtttgac gctgatagtg
    19741 ttgatacttc cgtaatgcga tgcggtaatt gttggtgctg gtggtgggca gccacggggc
    19801 gaggatttca tcaaggaaac cgtcctgcag ctgatcgagg gaaatatttt gctcatgtag
    19861 atgattcccc aaacggcgca aacgaacgac atattcacgc accgtacctg ggctcatttc
    19921 agtttgctca aaaagaaatt gcttaaagcc gataatatcg aaaaaatcac tctgcgtttt
    19981 gcaatgtaaa tcaccgcaaa atcggcacaa tgccgcccat gactgttgtt ccacttgcca
    20041 gccattttca tcaagcagcg tgtccaggcg ggaaatctcg attttattca ctattttgcc
    20101 gtcgcgaact aaggtaatgc gatcgagtaa tttacggcaa tgcgcgcaat gggcctggct
    20161 gtgtttaaag tctttaagat agcggcttaa tggccgtctt ttcaggtgct gcaccatcat
    20221 taagaactcc tggtagtcaa agttaaagtg cggcatttac tgacgttata acttacccag
    20281 tttagtgctt aaccgtttaa tggcctggct gtgtaactga ctgacccgcg attccccgac
    20341 ctccagcacc gcgccaatct ctttgagatt cagctcttcc tggtaataga gggttaatac
    20401 cagtttttcg cgctccggca acgtttcgat agcttccatc acccgctggc gcagattact
    20461 gtccagcagt tgttgtagcg ggttttctcg ctgatgatca tcagtaacca gttcgatgct
    20521 atcgccgtgc tcttcgcgcc actcatcgta ggagaaaagc tggctgttat tggtgtcgag
    20581 caacatttgg cgataatcgg caatatcgat ccctaaacgt tccgctacct cagtttccgt
    20641 ggcgttgcgg ccaagttcct gctccagttg ccctattgcc tgtgccactt cacgcgcgtt
    20701 gcgtcgcacg ctgcgcggca cccagtcacg gctgcgaagt tcatccagca tagcgccacg
    20761 gatacgctgc actgcgtaag ttgtaaatgc cgttccttgt agggcgtcat agcgttcgac
    20821 ggcattaagt aacccaatgc cgcccgcctg tagcagatcg tcaagttcca cgctcgcggg
    20881 cagtcgaacc tgcaggcgca atgcttcgtg acgcaccagc gggacataac gctgccacag
    20941 cgagtgttta tccattacac cttcagcggt atagagtgaa ttcacgataa acagccctgc
    21001 gttatatgag ttatcggcat gattatccgt ttctgcaggg tttttaatcg gacgattagt
    21061 gggtgaaatg aggggttatt tgggggttac cggtaaattc catgcagaaa aaaccccgcc
    21121 ggtggcgggg aagcacgttg ctgacaaatt gcgctttatg ttgccggatg cggcgtaaac
    21181 gccttatccg gcctacaaaa atgtgcaaat tcaataaatt gcaattcacc ttgtaggcct
    21241 gataagtgca gcgcatcagg caatttggcg ttgccgtcag tctcagttaa tcaggttacg
    21301 acgattaacc ctgcagcaga gacagaacct actgcggtac ctggttggct tttgccagca
    21361 cggagttacc ggcctgctgg atgatctgcg ctttcgacat gttggacact tcggtcgcat
    21421 agtcggcgtc ctgaatacgg gactgcgctt cagacaggtt ggtagtggtg ttgttcaggt
    21481 tggtgactgc agaatccaga cggttctgaa tagcacccag ggatgaacgg aatttgtcga
    21541 tggagctgat agcttcatcc agggcagcca gaggatcttt ggttgcagtg cctgcactgg
    21601 tggtttcagt ggtcagtttg cctgtagagt taacataagc ctgtgcccca acagtagctg
    21661 caaatttacc agttgcacct gcgccatttg aagctacagt tactgtaccg gtatccttat
    21721 cgacgttgta gttgatagtg taagatgcgg ttgtggtgag ctctttgtct gcatcagtat
    21781 aggtgtcatt cgaattacca gcaccattag tattcgcacc accgaaggac gccgttgcag
    21841 actgaatacc tgtattatac ttaattgtcg caccagtaac tgctgtgtta gccgttgcag
    21901 cactctgcac tgtgctcagt acagtatcag cgcttacagt tttggtgtag gttacgccag
    21961 aagttgccgc tgcaccaaag ttataagttg tgccagacaa ctggatagaa ccagttgtcg
    22021 ctaaggtact accgctagca aacagatcgg acaatttcgc tgaagatgca atgccggcgt
    22081 tgtttgtaga taggttacca gtggcgtcca ggtacgcggc tttaccaccg atggtcacat
    22141 cgccattagc atctacatca aacttcacat caccagtact acgagtataa acacctgatg
    22201 cagtagtgcc agccgctggt ttcagagtat tcgcaaagtt aacaacatcg ccatctgcaa
    22261 ctgttgcttg agtggtgaag ttccctttag ccgcatcata agtatagatc gcagcactcg
    22321 agccagtagt agtaactgta tctccggttt tcaggcgaga cagtgcatcg ctagcgctga
    22381 gtgctgtatt gtttgtggtc acagcataag gacctgttcc cgttgcacca gcagcggtca
    22441 gatcgctgac tgtagcagct ttgttcgcaa tagtgccttt gccattcacg ttaaaaccat
    22501 tcagccccag cgtatctgag tcaattttct tcagatcaat cgtgatagtc tggccgtcat
    22561 tcgcaccaac ctgaattttc attgaaccgt ctttcgccag tacgttcacg ccgttgaact
    22621 gggtctggcc agatacgcgg tcaatttcgt ccagacggga tttgatttcg tcctgaatgg
    22681 agtccagatc cgaatcggag ttagtcccgg tagaagcctg aaccgtcagt tcaagaatac
    22741 gctgtaagtt gttgttgatt tcggacagcg cgccttcagt ggtctgcgca acggagatac
    22801 cgtcgttggc gttacgggcc gcctgagtca ggcctttaat attagaagta aaacggttag
    22861 caatcgcctg acctgcggcg tcatccttcg cgctgttaat acgcaagcca gaagacagac
    22921 gctcgataga actcgacagc gcagactggt tcttgttgat attattttga gtgatcagcg
    22981 agaggctgtt ggtattaatg acttgtgcca tgattcgtta tcctatattg caagtcgttg
    23041 attacgtatt gggtttccac ccgtcggctc aatcgccgtc aaccctgtta tcgtctgtcg
    23101 taaaacaacc tttagaattt ttttcacaaa cagccatttt ttgttagtcg ccgaaatact
    23161 cttttctctg ccccttattc ccgctattaa aaaaaacaat taaacgtaaa ctttgcgcaa
    23221 ttcaggccaa taaccccggt attcgtttta cgtgtcgaaa gataaaagga aatcgcatgg
    23281 caagtatttc atcgctggga gtcgggtcag gtctggattt aagttcaatc cttgatagcc
    23341 tcaccgccgc gcaaaaagcg acgctaaccc ctatttcaaa tcagcaatcg tcgtttaccg
    23401 ctaaacttag cgcctacggt acgctgaaaa gcgcgctgac gactttccag accgccaata
    23461 ctgcattgtc taaagccgat cttttttccg ccaccagcac taccagcagc accaccgcgt
    23521 tcagtgccac cactgcgggt aacgccatcg ccgggaaata caccatcagc gtcacccatc
    23581 tggcgcaggc gcaaaccctg accacgcgca ccaccagaga tgatacgaaa acggcgatcg
    23641 ccaccagcga cagcaaactc accattcaac aaggcggcga caaagatccg attaccattg
    23701 atatcagcgc ggctaactca tcgttaagcg ggatccgtga tgctatcaac aacgcaaaag
    23761 cgggcgtaag tgcgagcatc attaacgtgg gtaacggtga atatcgtctg tcagtcacat
    23821 caaatgacac cggccttgat aatgcgatga cactctcggt cagcggtgat gatgcgctac
    23881 aaagttttat gggctatgac gccagtgcca gcagcaacgg tatggaggtc tcggtcgccg
    23941 ccaagaatgc gcagctgacg gtcaacaacg tcgccattga gaacagcagc aacaccatca
    24001 gcgacgcgct ggaaaacatc accctgaacc tgaacgatgt caccacgggc aaccagacgc
    24061 taaccatcac tcaggacacc tccaaagcgc aaacggcgat taaagactgg gtgaatgcct
    24121 ataactcgtt aatagatacc ttcagtagcc tgaccaaata caccgccgta gatgcgggag
    24181 ctgatagcca gagttctagc aatggcgcac tgctcggcga ctccacgctg cggacgattc
    24241 agacgcagtt gaagtcgatg ctgagtaata ccgtcagttc ttccagctat aaaacgctgg
    24301 cgcagattgg tatcacgacc gatcccagcg atggcaaact ggaactggat gccgacaaac
    24361 tcaccgctgc actgaaaaaa gatgccagcg gcgtaggtgc attgattgtt ggcgatggta
    24421 aaaaaaccgg catcacgacc accatcggca gcaacctgac cagttggctt tcgacaacgg
    24481 gcattattaa agccgctacc gatggcgtta gtaagaccct gaataagtta actaaagact
    24541 acaacgccgc cagcgatcgc attgatgcgc aggtcgcgcg ctacaaaaaa caatttaccc
    24601 aactggacgt tttaatgacc tcgttaaaca gcaccagcag ctacttaacg cagcagttcg
    24661 aaaacaacag taattccaag taatcattat tcatcgggag acaggtcatg tacgcggcaa
    24721 aaggcaccca ggcctatgca caaattggcg tcgaaagcgc cgtaatgagc gccagccagc
    24781 agcagctggt caccatgcta tttgatggag tgctgagcgc actggttaga gcgcgcctgt
    24841 ttatgcagga caacaatcag caaggcaaag gcgtctcttt gtcaaaagcg atcaacatca
    24901 ttgagaacgg actgcgggtg agtcttgatg aagagagcaa agacgaacta acccaaaact
    24961 tgattgctct ttatagctat atggtcaggc gcttgctgca agccaattta cgcaacgatg
    25021 tctccgcagt cgaagaagtg gaagcattaa tgcgcaatat tgccgatgcc tggaaagagt
    25081 cgttactctc cccttctttg attcaggacc cagtctgatg aaccatgcac cgcatttgta
    25141 tttcgcctgg caacaactcg tcgaaaaaag ccagctcatg ttacgcctgg caacggaaga
    25201 acaatgggac gaactcatcg ccagcgaaat ggcgtatgtg aatgcggtgc aggagtatag
    25261 cacacctgac tgaagaggtt gccccgtcca ccacgatgca ggagcagctc cgcccgatgc
    25321 tgcgcctgat tctcgacaac gaaagcaagg taaagcagtt attacagatt cgtatggatg
    25381 aactggcgaa actggtcggt cagtcatcgg tgcaaaaatc ggtgttaagt gcctatggcg
    25441 atcagggcgg ctttgtgctg gctccgcaag ataacttctc gtgaatctta acgagctaat
    25501 ggttcgcgaa taatccgatt acggctacgc ttctaatgtt ccccttgaat ggagtcgaag
    25561 aatgcgtaat cccacgctgt tacaatgttt tcactggtat tacccggaag gcggtaagct
    25621 ctggcctgaa ctggccgagc gcgccgacgg ttttaatgat attggtatca atatggtctg
    25681 gttgccgccc gcctataaag gcgcatcggg cgggtattcg gtcggctacg actcctataa
    25741 tttatttgat ttaggcgagt ttgatcagaa aggcagcatc cctactaaat atggcgataa
    25801 agtacaattg ctggccgcca ttgacgccct gaaacgtaat gacattgcgg tgctgttgga
    25861 cgtggtagtc aaccacaaaa tgggcgcgga tgaaaaagaa gctattcgcg tgcagcgtgt
    25921 aaatgctgac gaccgtacgc aaattgatga agaaatcatt gagtgcgaag gctggacgcg
    25981 ttacaccttc cccgcccgtg ccgggcaata ctcacagttt atctgggatt tcaaatgttt
    26041 tagcggtatc gaccatatcg aaaaccctga tgaagatggc atatttaaaa ttgttaacga
    26101 ctacaccggc gaaggctgga acgatcaggt tgatgatgaa ttaggtaatt tcgattatct
    26161 gatgggcgag aatatcgatt ttcgcaatca tgccgtgacg gaagagatta aatactgggc
    26221 gcgctgggtg atggaacaaa cgcaatgcga cggttttcgt cttgatgcgg tcaaacatat
    26281 tccggcgtgg ttttataaag agtggatcga acacgtacag gaagttgcgc caaagccgct
    26341 gtttattgtg gcggagtact ggtcgcatga agtcgataaa ctgcaaacgt atattgatca
    26401 ggtggaaggc aaaaccatgc tgttcgatgc gccgctgcag atgaaattcc atgaagcatc
    26461 gcgcatgggg cgcgactacg acatgacgca gattttcacg ggtacattag tggaagccga
    26521 tcctttccac gccgtgacgc tcgttgccaa tcacgacacc caaccgttgc aagccctcga
    26581 agcgccggtc gaaccgtggt ttaaaccgct ggcgtatgcc ttaattttgt tgcgggaaaa
    26641 tggcgttcct tcggtattct atccggacct ctacggtgcg cattacgaag atgtcggtgg
    26701 tgacgggcaa acctatccga tagatatgcc aataatcgaa cagcttgatg agttaattct
    26761 cgcccgtcag cgtttcgccc acggtgtaca gacgttattt ttcgaccatc cgaactgcat
    26821 tgcctttagc cgcagtggca ccgacgaata tcccggctgc gtggtggtca tgtcgaacgg
    26881 ggatgatggc gaaaaaacca ttcatctggg agagaattac ggcaataaaa cctggcgtga
    26941 ttttctgggg aaccggcaag agagcgtaat aaccgacgaa cacggcgaag caaccttctt
    27001 ttgcaacggc ggcagcgtca gcgtgtgggt tatcgaagag gtgatttaaa ttcatccccg
    27061 gcggcaagcc ggggagattt cattacggca gtggcgtcgg taacggcgct ttatccagcg
    27121 cggcggcaca ctctgccgtc gggcgatcca cacgctccat cgtcatacca tcgtactcaa
    27181 tggtgttacc gtcacgctca acctcgtaca gctcacgttt tacggtaacg ttagtgagat
    27241 catcagacat caatgccaac ttacccggca cagcaatcac ccgctgccac tgacggcaat
    27301 ccagagtatc accctcttta gtgacaatca ggctgcctat cgcttccgga ctgaccagcg
    27361 cacgttgcgg ccctttggtc tgccagtagc ccgccagcca gtccggcgcg ggggttttca
    27421 cgacattgtt atagttttcg acttcggcac agcccgccag caacatgagc gcgcctgcaa
    27481 ttgcgagttt tttcatcatt cgtcctgcat gagaagaaaa gaggattgtg gcattaaagc
    27541 cctgatgtcg ccagcctttc caggttcaga gagaaatttg atctaactat tatttttgtg
    27601 aattattacc ccgaaaataa atttgcatga tgtatgattc gcgactcttg tttcaaacct
    27661 tctgagttca gaggctacat tcatgtcatg gcagcaattc aaacacgcct ggttgattaa
    27721 attctgggca cccatccctg cggtcatcgc ggcgggtatt ctctccactt actattttgg
    27781 cattactggc accttttggg ctgtcacggg tgaatttacc cgttggggcg gccagctcct
    27841 gcagctgttt ggcgtccatg ctgaagagtg gggttatttt aaaattatcc atctggaagg
    27901 atcgccatta acccgcatcg acgggatgat gatcctcggc atgtttggcg gctgctttgc
    27961 cgcagcgctg tgggccaaca atgtcaaact gcgcatgcca cgcagccgta tccgcattat
    28021 gcaggccatt attggcggta ttatcgctgg ttttggcgcg cgtctggcaa tgggctgtaa
    28081 cctggcggcg ttctttaccg gtattcctca gttctcgctg catgcctggt tctttgccat
    28141 cgccactgcc attggttcat ggtttggcgc acgctttacc ctgctgccca tcttccgtat
    28201 tcccgtgaaa atgcagaaag tttctgccgc ctcaccgctg acgcaaaaac cggatcaggc
    28261 gcggcgtcgt tttcgtctcg ggatgctggt ctttttcggt atgctgggct gggcgctgct
    28321 cacggcgatg aaccaaccaa aactggggct ggcaatgctg tttggcgtcg gctttggttt
    28381 actgattgaa cgtgcgcaaa tctgctttac ttcggcgttc cgcgatatgt ggatcaccgg
    28441 acgtacccat atggcgaaag caatcattat cggtatggcg gtgagtgcca tcgggatctt
    28501 cagttacgta cagttaggcg ttgaacccaa aatcatgtgg gcgggaccaa acgcggtaat
    28561 tggtggttta ctgtttggtt ttggcatcgt gctggcaggc ggctgcgaaa ccggctggat
    28621 gtaccgcgcg gtagaaggcc aggtgcacta ctggtgggtc ggtctgggca atgtgatcgg
    28681 ctcgacgatt ctggcgtatt actgggatga tttcgctccg gcgctggcca ccgactggga
    28741 caaaatcaac ctgctgaaaa cctttggccc gatgggtggc ctgctggtga catatttgct
    28801 gttgtttact gcgctgatgt tgattatcgg ctgggaaaaa cgcttcttcc gccgtgcggc
    28861 accgcagact gctaaggaga tcgcatgaaa aatatcgttc ctgattaccg ccttgatatg
    28921 gtgggtgaac cctgccctta tccggcagtc gcaacccttg aggcgatgcc gcagttaaaa
    28981 aaaggggaaa tcctggaagt ggtgagcgac tgtccacagt cgatcaataa tattccactg
    29041 gatgcgcgta atcacggcta tacggtgcgg gatattcagc aagacgggcc gaccattcgt
    29101 tatttaattc agaagtaatc cctcattccc gctgtggccc acagcgggaa catcgttgcc
    29161 tctgacacat agattttacc cgccccctct cctattcttt tcagtatgat ctcaggaggt
    29221 ttctatgtgt ggacgctttg cccaatccca aacgcgtgaa gattaccttg cgcttctcgc
    29281 ggaagatatt gaacgcgata ttccctacga tcccgaaccc attggcagat acaacgtcgc
    29341 gccgggaacc aaagttcttc tgctcagtga acgtgatgaa caccttcatc tggatccggt
    29401 tttctgggga tatgctcccg gatggtggga taaaccgccg ctgattaacg cccgcgtaga
    29461 aactgccgca accagtcgca tgtttaaacc gctctggcaa catggtcggg caatctgttt
    29521 tgccgatggc tggtttgagt ggaaaaaaga aggcgacaaa aaacagcctt tttttatcta
    29581 tcgtgctgat ggacaaccta tttttatggc cgcgataggt agcacaccat ttgagcatgg
    29641 tgacgaagcc gaaggatttt taattgtcac tgctgcagca gaccagggtc tggtagacat
    29701 tcatgaccgc cgcccgctgg ttctgtcgcc agaagctgca caggaatgga tgcggcaaga
    29761 gattggcggt aaagaagcat cagaaattgc taccaacggc tgtgtgccag caaaccagtt
    29821 cacctggcac ccggtatcgc gcgcggtagg taatgtcaaa aaccagggcg cggagttaat
    29881 tcaacctgtt tgttgacatc ctccacgccc tgaaggacga ggctccctgc tacgttcagg
    29941 ctgtcgcctg aatcatttcg gtgggttcct gcttcaacgg gcggcctgac tgcaccat
//
LOCUS       DAJVUK010000033        29123 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.033, whole genome shotgun sequence.
ACCESSION   DAJVUK010000033 DAJVUK010000000
VERSION     DAJVUK010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29123
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.033"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..155
                     /locus_tag="OQQ57_001403"
     CDS             <1..155
                     /locus_tag="OQQ57_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2135 domain-containing protein"
                     /protein_id="HCS1956221.1"
                     /translation="NYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTL
                     VKSFDW"
     gene            430..3279
                     /gene="rcsC"
                     /locus_tag="OQQ57_001404"
     CDS             430..3279
                     /gene="rcsC"
                     /locus_tag="OQQ57_001404"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HCS1956222.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANR
                     LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGEPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(3479..4129)
                     /gene="rcsB"
                     /locus_tag="OQQ57_001405"
     CDS             complement(3479..4129)
                     /gene="rcsB"
                     /locus_tag="OQQ57_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HCS1956223.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(4146..6818)
                     /gene="rcsD"
                     /locus_tag="OQQ57_001406"
     CDS             complement(4146..6818)
                     /gene="rcsD"
                     /locus_tag="OQQ57_001406"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HCS1956224.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVNTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST
                     LPLKDLTSGFKESTISDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGDNDNEKEGTDSVSIHFNS
                     TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
                     SRSTESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
                     NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE
                     IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
                     RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
                     FPFINQPQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
                     VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP
                     SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
                     GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
                     KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
     gene            7557..8687
                     /gene="ompC"
                     /locus_tag="OQQ57_001407"
     CDS             7557..8687
                     /gene="ompC"
                     /locus_tag="OQQ57_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HCS1956225.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKSEDGDQTYVRLGFKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGL
                     KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFG
                     LVDGLNFAVQYQGKNGSVSGEGMTNNGRGALRQNGDGVGGSITYDYEGFGIGAAVSSS
                     KRTDDQNGSYISNGVVRNYIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSL
                     GWANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLGVINSRNYDDEDILKYVDVGATY
                     YFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
     gene            8799..9854
                     /gene="apbE"
                     /locus_tag="OQQ57_001408"
     CDS             8799..9854
                     /gene="apbE"
                     /locus_tag="OQQ57_001408"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HCS1956226.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MAEIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDEMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
                     GINGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLVSEKN"
     gene            9928..10980
                     /gene="ada"
                     /locus_tag="OQQ57_001409"
     CDS             9928..10980
                     /gene="ada"
                     /locus_tag="OQQ57_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HCS1956227.1"
                     /translation="MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
                     RHALRENVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTL
                     EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
                     DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCALGRCLVAESERGICAILLGDD
                     DATLISELQQMFPAADNAPADLTFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
                     QALRTIPCGETVLANAIGKPKAVRAVASACAANKLAIVIPCHRVVGGDGTLSGYRWGV
                     SRKAQLLRREAENEER"
     gene            10980..11630
                     /gene="alkB"
                     /locus_tag="OQQ57_001410"
     CDS             10980..11630
                     /gene="alkB"
                     /locus_tag="OQQ57_001410"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HCS1956228.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
                     PFRQMVTPGGYTMSVAMTNCGHLGWTIHRQGYLYSPIDPQTNKPWPAMPQSFHDLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFYPLTTDCRYNLTFRQAGKKE"
     gene            11706..13349
                     /gene="yojI"
                     /locus_tag="OQQ57_001411"
     CDS             11706..13349
                     /gene="yojI"
                     /locus_tag="OQQ57_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HCS1956229.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIEMA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLMAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQD
                     NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            13567..15213
                     /gene="mqo"
                     /locus_tag="OQQ57_001412"
     CDS             13567..15213
                     /gene="mqo"
                     /locus_tag="OQQ57_001412"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HCS1956230.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMLERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDADKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLDLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(15363..15851)
                     /gene="eco"
                     /locus_tag="OQQ57_001413"
     CDS             complement(15363..15851)
                     /gene="eco"
                     /locus_tag="OQQ57_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HCS1956231.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
                     VR"
     gene            complement(15986..16150)
                     /locus_tag="OQQ57_001414"
     CDS             complement(15986..16150)
                     /locus_tag="OQQ57_001414"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956232.1"
                     /translation="MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKHIYIAINSPEI
                     FLLVCSLIRI"
     gene            16259..16753
                     /gene="napF"
                     /locus_tag="OQQ57_001415"
     CDS             16259..16753
                     /gene="napF"
                     /locus_tag="OQQ57_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HCS1956233.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
     gene            16743..17006
                     /gene="napD"
                     /locus_tag="OQQ57_001416"
     CDS             16743..17006
                     /gene="napD"
                     /locus_tag="OQQ57_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HCS1956234.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            17003..19489
                     /gene="napA"
                     /locus_tag="OQQ57_001417"
     CDS             17003..19489
                     /gene="napA"
                     /locus_tag="OQQ57_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HCS1956235.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTLITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTQDATDPLSKETDFKKCAVKLEKV"
     gene            19496..20191
                     /gene="napG"
                     /locus_tag="OQQ57_001418"
     CDS             19496..20191
                     /gene="napG"
                     /locus_tag="OQQ57_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HCS1956236.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHRDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWLEGNNGKS"
     gene            20178..21041
                     /gene="napH"
                     /locus_tag="OQQ57_001419"
     CDS             20178..21041
                     /gene="napH"
                     /locus_tag="OQQ57_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HCS1956237.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVVGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNRCMDCFHVCPEPRVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            21038..21487
                     /gene="napB"
                     /locus_tag="OQQ57_001420"
     CDS             21038..21487
                     /gene="napB"
                     /locus_tag="OQQ57_001420"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HCS1956238.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            21497..22099
                     /gene="napC"
                     /locus_tag="OQQ57_001421"
     CDS             21497..22099
                     /gene="napC"
                     /locus_tag="OQQ57_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HCS1956239.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            22118..22735
                     /gene="ccmA"
                     /locus_tag="OQQ57_001422"
     CDS             22118..22735
                     /gene="ccmA"
                     /locus_tag="OQQ57_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HCS1956240.1"
                     /translation="MLEARELLCEQDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
     gene            22732..23394
                     /gene="ccmB"
                     /locus_tag="OQQ57_001423"
     CDS             22732..23394
                     /gene="ccmB"
                     /locus_tag="OQQ57_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HCS1956241.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            23436..24173
                     /gene="ccmC"
                     /locus_tag="OQQ57_001424"
     CDS             23436..24173
                     /gene="ccmC"
                     /locus_tag="OQQ57_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HCS1956242.1"
                     /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            24170..24379
                     /gene="ccmD"
                     /locus_tag="OQQ57_001425"
     CDS             24170..24379
                     /gene="ccmD"
                     /locus_tag="OQQ57_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HCS1956243.1"
                     /translation="MTLAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
                     AILCGVEQQRAREARLRAAQQQEAA"
     gene            24376..24855
                     /gene="ccmE"
                     /locus_tag="OQQ57_001426"
     CDS             24376..24855
                     /gene="ccmE"
                     /locus_tag="OQQ57_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HCS1956244.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            24852..26795
                     /gene="ccmF"
                     /locus_tag="OQQ57_001427"
     CDS             24852..26795
                     /gene="ccmF"
                     /locus_tag="OQQ57_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis heme lyase CcmF"
                     /protein_id="HCS1956245.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIF
                     LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT
                     LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARG
                     HKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
                     TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA
                     MTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYS
                     VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEKRY
                     YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG
                     LLCLFDPRYRKRVSPQKTAPEAV"
     gene            26792..27349
                     /gene="dsbE"
                     /locus_tag="OQQ57_001428"
     CDS             26792..27349
                     /gene="dsbE"
                     /locus_tag="OQQ57_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HCS1956246.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWEEEIKPLWEKYSKEAAQ"
     gene            27346..28398
                     /gene="ccmH"
                     /locus_tag="OQQ57_001429"
     CDS             27346..28398
                     /gene="ccmH"
                     /locus_tag="OQQ57_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis thiol:disulfide
                     oxidoreductase CcmH"
                     /protein_id="HCS1956247.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVRVVPDAFPEQSVPEGKRAGYIVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLSANDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(28433..29080)
                     /gene="narP"
                     /locus_tag="OQQ57_001430"
     CDS             complement(28433..29080)
                     /gene="narP"
                     /locus_tag="OQQ57_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HCS1956248.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPSFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
BASE COUNT         6647 a         7193 c         8076 g         7207 t
ORIGIN      
        1 tcaactacta tggtgggcgc agcgaaacgg aattaaccac cgcccaactg acgctgatca
       61 ccgatgaagg atcggtcaat gagaaacagg aaacatttat tgtaccgatg cgtaatgctg
      121 gcgagctgac gctggtgaaa agttttgact ggtgatccat cccttcacac aacctggctc
      181 tctctttttt cagataagac tgctgggcga tctgccgacg ccaggatata accattaaca
      241 agcgtcggca gattggtcat ttcttatttt tcgtactgag aactgtccat ctactccggc
      301 tttcctggtt aaggcaatgg tttctaagcg atacgcatta ttgcaataat gacagaacat
      361 tgcggtaaca cgcttttacc gctaccttaa ccacactcca tcggtcacct gaggcggagc
      421 ttcgcccctt tgaaatacct tgcttctttt cgtacaaccc tgaaagcctc gcgctacatg
      481 ttcagagcat tggcgttagt gctctggctg ttgattgctt tttcatccgt tttttacatc
      541 gttaatgcgt tacatcagcg agaatcggaa attcgtcagg aatttaatct gagttccgat
      601 caggctcagc gctttattca acgcacctct gatgtgatga aagagctgaa gtacatcgcc
      661 gaaaatcgct tatcggcaga aaacggtgtg ctttccccgc gtggacgaga aacgcaggcg
      721 gatgtgcctg cgtttgaacc gctgtttgcc gactccgatt gttccgcaat gagtaacacc
      781 tggcgaggtt ctctggagtc attggcgtgg tttatgcgct actggcgcga taatttttct
      841 gcggcttacg atctaaaccg ggtattttta atcggcagcg ataacctctg catggccaat
      901 ttcggtctgc gtgatatgcc agtggaacgc gataccgcgt tgaaagcttt gcatgaacgc
      961 atcaataaat atcgaaatgc accacaagat gatagcggca gtaacctcta ctggatcagc
     1021 gaaggtccgc gccctggcgt cgggtatttt tacgcgttga cgccagttta tctggcgaac
     1081 cggttgcagg cgcttttggg ggtcgagcag accatccgga tggagaactt tttcttaccg
     1141 ggtacgttgc cgatgggggt taccattctt gatgaaaatg gtcataccct gatttcgctt
     1201 accggaccag aaagtaaaat taagggcgag cctcgctgga tgcaggaacg ctcctggttt
     1261 ggctatacgg aagggttccg ggagctggtg ctgaagaaaa atctgccacc ctcatcgcta
     1321 agcatcgtgt attcggtgcc ggttgataag gtgctggaac gcattcgcat gttgatcctt
     1381 aacgcaattt tgctgaatgt gcttgccgga gctgcattgt ttactctcgc acggatgtac
     1441 gagcgacgta ttttcattcc ggcggaaagc gacgccctgc gactggaaga acatgagcag
     1501 ttcaatcgca agattgtcgc ctccgcgcca gtgggtatct gcattttgcg taccgctgat
     1561 ggcgtcaata ttttaagtaa cgaactggcg catacctatc tcaatatgct tacgcatgag
     1621 gaccgccaac gactgacgca aattatctgt gggcagcagg tcaattttgt tgatgtcctg
     1681 accagcaaca ataccaatct gcaaatcagc ttcgtccatt cgcgctatcg taatgaaaac
     1741 gtggccattt gtgtgctggt ggatgtttct tcgcgcgtga agatggaaga gtcgttgcag
     1801 gagatggcac aagcagcgga acaggcgagc cagtcaaaat cgatgttcct tgccaccgtc
     1861 agtcatgagc tgcgaacgcc gctgtatggc attatcggta acctggatct gttgcaaacc
     1921 aaagagttac cgaaaggcgt cgatcggctg gtgacggcaa tgaacaactc ttccagcctg
     1981 ttgttgaaaa ttatcagcga tattctcgat ttctcgaaga ttgaatcgga acagttgaag
     2041 atcgaaccgc gtgagttttc accgcgtgaa gtgatgaacc acatcaccgc caactattta
     2101 ccgctggtgg tacgcaagca gttaggcttg tactgcttta ttgaaccgga tgtgccagtg
     2161 gccttaaatg gcgacccgat gcgtttacag caggtcatct ccaacctgtt gagtaacgcc
     2221 ataaaattca ccgataccgg ctgtatagtt ttgcatgtcc gcgctgatgg cgattatctc
     2281 tctatccgtg ttcgcgatac cggcgtgggg attccggcga aagaagtggt gcgcttgttt
     2341 gatcccttct tccaggtcgg aacgggcgta cagcgaaact tccaggggac cggtctgggt
     2401 ctggcgattt gtgaaaaact gatcagcatg atggacggcg atatctcggt agattcagaa
     2461 ccgggaatgg gcagccagtt taccgtgcgt attccgttgt acggcgctca gtacccgcag
     2521 aaaaaaggcg tggaagggtt gagtggtaaa cgctgctggc tggcggtccg caatgcgtcg
     2581 ctctgtcagt tcctggaaac tagtttgcag cgcagcggca tcgtcgttac aacatacgaa
     2641 gggcaggaac cgactcccga agatgtgtta attactgacg aggtagtgag taaaaaatgg
     2701 cagggtagag cggtagtgac cttctgtcgt cgccatattg gtattccgct ggagaaagcg
     2761 ccaggggagt gggtacacag tgtggctgcc ccgcatgagc taccggcatt gttggcgcgt
     2821 atttatttga tcgagatgga gagcgacgat cctgctaacg ctctgccgtc gacggacaaa
     2881 gcggtcagcg ataatgacga tatgatgatt ctggtcgtgg atgatcatcc gattaaccga
     2941 cgtctgctgg cagatcagtt gggatcgttg ggctatcaat gtaaaaccgc gaatgatggt
     3001 gtcgatgcgc ttaatgtact tagcaagaat catattgata tcgtgcttag cgacgtcaac
     3061 atgccaaata tggatggtta ccgcttgacg caacgcattc gtcagttggg actgacgttg
     3121 ccggtaatcg gagtaactgc taatgcgttg gctgaagaga agcagcggtg tctggagtcc
     3181 ggtatggaca gctgcctgtc gaagccggta acgctggatg tgataaaaca gacgctgacg
     3241 gtatatgccg agagggtcag gaaatcgcgg gaatcgtagg acggataagg tgtttatgtc
     3301 gcatctggca ttcagtgcaa atgccagatg cgacgctgac gcgtcttatc tggcctactt
     3361 tgatgtaatc tgttgaaata atgggaatcg taggacgcat aaggcgttta cgccgcatcc
     3421 ggcaatcggt gcaaatgcca gataagacac taacgcgtct tatctggcct acaggtgatt
     3481 agtctttatc tgccggactt aacgtcactg aagagagata attcagcagg gcgatatcgt
     3541 tctcgacacc cagcttcatc atcgcagatt tcttctggct actgatggtt ttaatactgc
     3601 ggttcagctt tttagcgatc tcggtcacca agaagccttc cgcaaacagg cgcagaactt
     3661 cactctcttt tggcgagaga cgcttgtcac cgtaaccacc agcactgatt ttttccaaca
     3721 ggcgagaaac gctttccggg gtaaatttct tccctttctg cagcgcggcg agagctttcg
     3781 gcagatcggt cggtgcacct tgtttcagca cgatcccttc gatatccaga tccaataccg
     3841 cactaagaat cgccgggttg ttgttcatag tcagaacaat gatcgacagg cttgggaaat
     3901 ggcgcttgat gtacttgatt aaggtaatgc catcgccgta cttatcgcca ggcatggaga
     3961 gatcggtaat caacacatgc gcatccagtt tcggcaggtt gttgatcagt gctgtagagt
     4021 cttcaaattc gccgacaaca ttcacccact caatttgctc aagtgatttg cgaataccga
     4081 acaagactat cggatggtca tcggcaataa ttacgttcat attgttcatg taataggcta
     4141 ccttgctaca gcaagctctt gacataactg tcaatgtcgc tgatgtattt ttctattcct
     4201 ggaacatcct tctcacgaat cagatgttcc agcgtttcac ataactgctt gccgggtacc
     4261 agatttagca tggcaaatac gcctttaaga cgatgagccg tttgggctaa cgcagcaaag
     4321 tcactggttg ctgcttcagt atacagcctc ttaacatcat ccggtactgt gtctacaaag
     4381 agcgcataat agccgctggc atggagttgc gcattttcat ctccgcccag aggcgattct
     4441 gtcacctctt cctgcgccag ttgcacttca attaattgta agaccgcttc ctgcatagcg
     4501 ttgctcatat tgaagttgac gcacaattga ccaggcccaa tttcccgtac gccagactca
     4561 tcatcgctta aaagcaagcc agaggcagta agattagacg gattatccgt taaaaagata
     4621 tcataatctt gactaattaa tctttcatcg ggtgtgatac aggttgcacc ccaattttct
     4681 aactggcgag tgacaatatt ccgaatttct gccgaagtaa catccaccat tacgcagaca
     4741 tcatccagta aacgctcttc ttcctcttca acttccgggt cagcggcgag cattttgata
     4801 tgcacagagt agcgtgtacc aagcccatcc cgcgttttga tgtttaaatg accgcccagt
     4861 ttacgcgcca gttgatcgct cagccagaat gccagcgggt ccgccttgcc atagcgatcg
     4921 ttttggggct ggttgataaa cgggaagtgc aaattatcca tttcatgaat acttacgcct
     4981 tctcccgtgt ccagaatgcg gaatgtcagg cggtcttcag aggactcatc ctgatcaacc
     5041 tcaagggtga tttttcccaa ttgcgttgag gtcacggcat attgcatcag tagcagcaaa
     5101 atacgtcgta aggcatcgcg atcgccgcgg cgcatatcgt gtgctttcag atgattgtta
     5161 atcagcagtt gcagaccttt acgcttgatg gcaggcaaca ctgaaggcac aacttcatca
     5221 attaaatcct gcacggagaa cagcaccgtc tcacttttcc agctatcgtc cgcaagcatg
     5281 ttcgctaact gtatttcatc gaccagccgc accagcacat ctgcctgatt cgccagttgt
     5341 ttgctttccg gggcgttgag tttagccgcg ctctccgcca gggactgtgc gggttctttc
     5401 agcgcatcgc caatgttttt cataaaggtc atccgcccct gctggttttt ctcatacaga
     5461 cgctgcgcct gcttgagttt cttgtttacc agcacttcgc gatcctgatc gcgaataatg
     5521 aaaatttgtg tgcgcggcgc gacctggctg cggaacatgc ggatctcata cagctcgtta
     5581 ttgatcgtcg cctgaataat cccctgatgc tgttccgcca tggtggtgat gttttgcaga
     5641 ttcaaatgcg gcagcaaatg atcggcaatt ttgttactta tgacagtgcg gttcgattcc
     5701 tgatcgtgaa ccagcaggcc gagcggcagc agtgagacta tctcttcatt aattgcccgt
     5761 aaaatgcgca attcgttatt gaccgccgtg ctgggtagac tttctgtact gcggctggag
     5821 aaatggcgga atgtggtata gccaaataac gccagcgcca gcaaaccgat gttcagcagc
     5881 agtggcagca gaatgttttg caacgtatcc agcaataagg tgccataagg aacctgccag
     5941 accaggcgca tatcggtaga gttgagtgcc gaggagattt caatcttcgt actgttaaag
     6001 tggatactga cgctatccgt cccttctttc tcattatcat tgtctcccgt tgccgtcgcg
     6061 tctggctcaa ggcggaaact gtccagcggc atacccggtg ggatcaaatc attaatcggt
     6121 agatcaaaag ctacgaccgt tgccagatgt cccggctggt tgaacgtggt acgcaaggta
     6181 aagtaatgac cgttctgcca ggccaggcgg cgcatgttag aaaaactttc gcgttcatcg
     6241 agggcgttgg cctgttgcaa catctctgca cgacgtgaat caacaatgtc gctgatggtc
     6301 gattctttaa atccggaggt gagatctttg aggggcaggg ttgagatcag caccagactg
     6361 ttatcctgac cattcaggta atacatcgac cacggtacat tttctgcgcc ccacaatgtg
     6421 tccagatagg tggacatccg ctgagtcatc tcaagcgttg agttgtcgtg agagccaaag
     6481 attaacgctt ccgttttgcg gcgcggtttc tccagatagt agacatcctg tttcaggcgc
     6541 gtctcttgta aaccttcgcc ggaggagggg gaggttgtcg cggcaatgtt gtcgtagatc
     6601 tgccaggtca cgtaacgcca ggtattgacg cgcttttgga tagcgtgggt aatgtcgaca
     6661 atctggtaac ttttatcttt cagccatgcg ttaacggcgc tttgtaccat tacacccatc
     6721 gtcaccagta acacaatgat caacagtaaa aagaagcggg taatgctccc cggtaggagt
     6781 gaaaagcggg tcgtggccgt tgtctctttc tgacgcattc gtgtttatga cctgttaaaa
     6841 cttcgcgaag tgatagggca gtataaaggg tacagtgtga aattccagac tcttacctga
     6901 ttgatgattc tctattctcc cgtgatattt atcatcctgc attgggggaa atagatgtac
     6961 aagcgccatt ttgctgtaca aataacctac aaaaagccca acgaaattaa ttgcaaataa
     7021 acgatgattg ctggaaatta tgctgatgtt aattatttgt gaaatagtta acaagcgtta
     7081 tagtttttct gtggtagcac agaataatga aaagtgtgta aagaagggta aaaaaaaccg
     7141 gatgcgaggc atccggttga aataggggta aacagacatt cagaaatgaa tgacggtaat
     7201 aaataaagtt aatgatgata gcgggagtta ttctagttgc gagtgaaggt tttgttttga
     7261 cattcagtgc tgtcaaatac ttaagaataa gttattgatt ttaaccttga attattattg
     7321 cttgatgtta ggtgcttatt tcgccattcc acaataatct taaaaagttc ccttgtattt
     7381 acattttgaa acatctatag cgataaatga aacatcttaa aagttttagt atcatattcg
     7441 tgttggatta ttctgcattt ttggggagaa tggacttgcc gactgattaa tgagggttaa
     7501 tcagtatgca gtggcataaa aaagcaaata aaggcatata acagagggtt aataacatga
     7561 aagttaaagt actgtccctc ctggtcccag ctctgctggt agcaggcgca gcaaacgctg
     7621 ctgaagttta caacaaagac ggcaacaaat tagatctgta cggtaaagta gacggcttgc
     7681 actatttctc tgacaacaag tcagaagacg gcgaccagac ctatgtacgt cttggtttca
     7741 aaggcgaaac tcaggttact gaccagctga ccggttacgg ccagtgggaa tatcagatcc
     7801 agggcaatac ctctgaagac aacaaagaaa actcctggac ccgtgtggca ttcgcaggtc
     7861 tgaaattcca ggatgtaggt tctttcgact acggtcgtaa ctacggcgtt gtttacgacg
     7921 taacttcctg gaccgacgta ctgccagaat tcggtggcga cacctacggt tctgacaact
     7981 tcatgcagca gcgtggtaac ggcttcgcga cctaccgtaa caccgacttc ttcggtctgg
     8041 ttgacggtct gaactttgct gttcagtacc agggcaaaaa cggtagcgta agcggcgaag
     8101 gcatgaccaa caacggtcgt ggcgctctgc gtcagaacgg cgacggtgtc ggcggttcta
     8161 tcacttatga ttacgaaggc ttcggtatcg gtgctgcagt ttccagctcc aaacgtactg
     8221 atgatcaaaa tggtagctac atcagcaatg gtgtagttcg taactacatc ggtactggcg
     8281 accgtgctga aacctacact ggtggtctga aatacgacgc taacaacatc tacctggctg
     8341 ctcagtacac ccagacctac aacgcaactc gcgtaggttc cctgggttgg gcgaacaaag
     8401 cacagaactt cgaagctgtt gctcagtacc agttcgactt cggtctgcgt ccgtctgtag
     8461 catacctgca gtctaaaggt aaaaacctgg gtgtcatcaa tagtcgtaac tacgacgacg
     8521 aagatatcct gaaatatgtt gatgttggcg cgacctacta cttcaacaaa aacatgtcca
     8581 cctatgttga ctacaaaatc aacctgctgg acgacaacca gttcactcgt gacgctggca
     8641 tcaacactga taacatcgta gctctgggtc tggtttacca gttctaatct cgattgatat
     8701 cgaacaaagg gcctgcgggc ccttttttca ttgttttcag cgtacaaact cagttttttg
     8761 gtgtactctt gcgaccgttc gcatgaggat aatcacgtat ggaaataagc tttacccgcg
     8821 tggcactgct ggctgccgcg ctcttctttg ttggttgcga tcaaaaacca caacccgcca
     8881 aaacccacgc tactgaagtt accgttcttg aaggcaaaac catgggtacc ttctggcgtg
     8941 ccagcatccc gggcattgat gccaaacgca gtgccgaact taaagaaaag attcagaccc
     9001 agctggacgc cgacgatcag ctgctttcga cctataaaaa agattccgcg ctgatgcgct
     9061 ttaacgactc gcaaagtttg tcgccgtggc cagtaagtga agcgatggcc gaaatcgtca
     9121 ctacctcgct gcgcattggc gcgaagaccg atggtgcgat ggatattacc gtcgggccgc
     9181 tggtaaatct gtggggcttt ggcccggaac aacagccggt tcaaattccg agccaggaac
     9241 agatcgacga gatgaaagcc aaaactggtt tacagcacct tacggtcatt aatcagtcgc
     9301 atcagcaata tctgcaaaaa gacctgccgg atttatatgt cgatctctct accgtcggcg
     9361 aaggttatgc ggcggatcac ttggcacgct tgatggagca ggaagggatt tcccgctatc
     9421 tggtgtcggt gggcggcgcg ctgaacagcc gtggtatcaa cggtgaaggc ctgccgtggc
     9481 gggtagcgat tcaaaaacca accgataaag aaaacgcagt tcaggctgtg gtggatatca
     9541 acggtcatgg gattagcacc tctggcagct accgtaacta ttacgaactg gacggcaaac
     9601 gtctttccca tgttatcgat ccgcaaaccg ggcgtcccat cgaacacaat ctggtatccg
     9661 tgacggtgat tgctccgacg gcgctggaag ccgatgcctg ggatactggc ttgatggtac
     9721 tcgggccgga gaaagccaaa gaggttgttc gccgggaagg gctggcggtt tatatgatca
     9781 ccaaagaagg cgatagcttt aaaacctgga tgtcaccaca gtttaaaagc ttccttgtca
     9841 gcgaaaaaaa ttaaagcgca agattgttgg tttttgcgtg atggtgaccg ggcagactaa
     9901 aggctatcct taaccaggga gctgattatg aaaaacgcca catgcttaac tgacgatcaa
     9961 cgctggcaat ctgtcttagc ccgcgacccg aatgccgacg gcgaattcgt tttcgccgtg
    10021 cgcaccacag gcatcttttg ccgtccgtct tgccgcgcca gacatgcctt gcgggaaaat
    10081 gtctccttct acgcaaatgc cagcgaggca ctcgccgccg gatttcgccc ctgcaaacgc
    10141 tgccaacctg ataaagccaa tgcccagcaa catcggttgg ataaaatcac ccacgcgtgt
    10201 cgactgctgg aacaggaaac gcctgtaacg ttggaagcct tagccgacca ggtggcgatg
    10261 agtccatttc atctacatcg gttgtttaaa gcgactaccg gaatgacgcc taaagcctgg
    10321 caacaggcct ggcgcgctcg ccgtttgcgc gaatcgctgg cgaaagggga gagcgtgacg
    10381 acgtctattc ttaacgccgg attccccgac agcagcagtt actaccgcaa agccgatgaa
    10441 acgctgggca tgacggctaa acaattccgt cacggtggcg aaaatctggc ggtgcgttac
    10501 gcgctggctg attgtgcgct gggtcgttgc ctggtggcag aaagcgagcg ggggatttgc
    10561 gcgatattgc tgggcgatga tgacgcgaca ttaatcagcg agttgcagca gatgtttccc
    10621 gctgccgaca acgcgcctgc cgatctgacg tttcagcaac atgtgcgtga agtgatcgcc
    10681 agcctcaatc aacgcgatac gccgctgacg ttaccgctgg atattcgcgg cactgctttt
    10741 cagcaacaag tctggcaggc actgcgcacg ataccttgcg gtgaaaccgt actggctaac
    10801 gccatcggca aaccgaaagc ggtacgggcc gttgccagcg cctgtgccgc caacaagctg
    10861 gctatcgtaa taccctgtca tcgagtggtc ggtggtgatg gcacactttc cggttaccgc
    10921 tggggcgtgt ctcgtaaagc gcaactgctg cgccgcgaag ctgaaaatga ggagaggtaa
    10981 tgttggatct gtttgccgat gctgaaccgt ggcaagagcc actggcggct ggtgcggtaa
    11041 ttttacggcg ttttgctttt aacgctgcgg agcaactgat ccgcgatatt aatgacgttg
    11101 ccagccagtc gccgtttcgc cagatggtca cccccggggg atataccatg tcggtggcga
    11161 tgaccaactg tgggcatctg ggctggacga tccatcggca aggttatctc tattcgccca
    11221 ttgatccgca aacaaataaa ccgtggcccg ccatgccaca aagctttcat gatttatgtc
    11281 aacgtgcggc tacggcggcg ggctatccag atttccagcc agatgcttgt cttatcaacc
    11341 gctacgctcc tggcgcgaaa ctgtcgctgc atcaggataa agacgaaccg gatctgcgcg
    11401 cgccaattgt ttctgtttct ctgggcttac ccgcgatttt tcaatttggt ggcctgaaac
    11461 gtaatgatcc gctcaaacgt ttgttgttgg aacatggcga tgtggtggta tggggcggtg
    11521 aatcgcggct gttttatcac ggtattcaac cgttgaaagc ggggttttat ccactcacca
    11581 ccgactgccg ctacaacctg acattccgtc aggcaggtaa aaaagaataa aaataagaat
    11641 tattattgct gtgcgcgcga agatgtttaa actgcgggct gtaattcatt gtccgggttt
    11701 tctgcatgga acttcttgta cttgtctggc ggcagtatcg ctggccattt atcagtgtga
    11761 tggcgctaag cctcgccagt gcggcattag gcattggctt aattgctttt atcaatcagc
    11821 gccttatcga aatggcggat accagtctgc tggtattgcc ggagtttctg ggattattgc
    11881 tgctgttgat ggcagtcact ctcggatcgc aactggcgct caccactttg gggcatcact
    11941 tcgtttaccg actgcgtagt gaatttatca agcggattct ggatacccac gtcgagcgca
    12001 ttgaacaact cggtagcgcc tcgttgttgg cgggattaac cagcgatgtg cgcaatatca
    12061 ccattgcttt tgtgcgtctt ccggaactgg tgcaggggat cattctcact atcggttccg
    12121 cggcgtatct gtggatgctg tcgggcaaaa tgttgctggt aacggctatc tggatggcga
    12181 tcaccatctg gggtggtttt gtactggtgg cgcgggtgta caaacatatg gcgaccctac
    12241 gtgaaaccga agacaagctg tacacggatt ttcaaactgt acttgaaggg cgcaaagagc
    12301 tgactctgaa ccgggaacgc gccgagtatg tgtttaacaa cctctacatc cccgatgcgc
    12361 aagagtatcg ccatcatatt attcgcgcag acaccttcca tcttagtgcc gtgaactggt
    12421 caaacatcat gatgctgggc gctatcggcc tggtgttctg gatggcgaac agtctcggtt
    12481 gggctgatac caacgttgct gcgacctatt cgttgacgct tttattcctg cgtacgccgc
    12541 tgctttcggc ggttggcgca ttgccgacgc tgctgatggc gcaggtggcg tttaacaagc
    12601 tgaacaaatt cgcgctcgcg cctttcaaag cagagtttcc gcgcccgcag gcgtttccca
    12661 actggcaaac gctggagctg cgtaatgtga cgtttagcta tcaggataac gcgttttccg
    12721 ttggtccgat taatctcacc atcaaacgtg gcgagctact gtttctgatt ggtggtaacg
    12781 gtagtggaaa atcgacgctg gcgatgttgt tgacgggctt gtatcagcca caaagcggcg
    12841 aaatcttgct ggatggcaaa cctgtcagcg gcgaacaacc ggaagattat cgcaaactgt
    12901 tttcggcagt gtttaccgat gtctggcttt ttgatcaact gctggggccg gagggtaaac
    12961 ccgctaaccc gcaactggtt gagaagtggc tggcgcagct gaaaatggct cataagcttg
    13021 agttaagcaa cgggcgtatt gttaacctga agttatcaaa agggcagaaa aaacgcgtgg
    13081 cgctgttgct ggcgctggca gaagaacgcg atattatcct gctggatgaa tgggcggcgg
    13141 atcaggatcc acacttccgt cgtgagtttt atcaggtgtt gctgccgctg atgcaggaga
    13201 tgggtaaaac tattttcgct atcagtcatg atgatcatta ctttatccac gccgaccgcc
    13261 tgctggaaat gcgcaatggg caacttagcg agctgacggg cgaagagcgc gatgccgctt
    13321 cgcgtgatgc cgttgcccgg acggcataat attacgacgc tgacctggcg gactgctgcc
    13381 gtcaggtcaa tatgctaaaa atcccttcat ttctaataac cctataatta atcaacgaaa
    13441 ttataatgtt tctaaaatta gaatataatt tataaacatt atttaaatgt tgttacttaa
    13501 gtgttacctt tgatgccgcg caaatctcac ctgcaataaa gcgactaaaa gtaaggcatt
    13561 aacaagatga aaaaagtgac tgccatgctc ttctcgatgg ccgtggggct taatgccgtt
    13621 tcgatggcgg caaaagcgaa agcgtccgag gagcaggaaa ctgatgtact gttgattggc
    13681 ggcggcatta tgagcgccac gttggggacc tatttacgcg agctggagcc tgaatggtcg
    13741 atgaccatgc tggagcgcct ggagggtgtc gcgcaggaga gttcgaacgg ctggaataac
    13801 gccggaaccg ggcattctgc actgatggaa ctgaactaca ccccgcaaaa cgccgatggc
    13861 agtatcagta ttgaaaaagc agtcgccatt aacgaagcat ttcagatttc ccgccagttc
    13921 tgggcgcacc aggtcgagcg cggcgtgctg cgtactccgc gttcatttat caataccgtt
    13981 ccgcatatga gctttgtctg gggcgaggat aacgttaatt tcctgcgcgc ccgttacgcc
    14041 gcgttgcaac aaagctcgct gtttcgcggt atgcgttact ctgaagatca cgcgcagatc
    14101 aaagagtggg caccgttagt gatggaaggg cgcgatccgc aacagaaagt ggcagccacg
    14161 cgtacggaaa ttggtaccga tgtgaactac ggcgagatca cccgccagtt aattgcttcc
    14221 ttgcagaaga aatctaactt ctcgctgcaa ctcagcagcg aagtccgcgc cctaaagcgt
    14281 aatgacgata acacctggac cgttaccgtt gccgatctga aaaatggcac tgcacagaac
    14341 attcgtgcca aatttgtctt tatcggcgcg ggcggtgcgg cgctgaagct gttacaggaa
    14401 tcggggattc cggaagcgaa agactacgcc ggtttcccgg tgggcggaca gttccttgtt
    14461 tcggaaaacc cggacgtggt taatcaccat ctggcgaagg tttacggtaa agcatccgtt
    14521 ggcgcaccac cgatgtcggt tccgcatatc gatacccgcg ttctggacgg taaacgcgta
    14581 gtgctgtttg ggccatttgc caccttctca accaaattcc tcaaaaacgg ttcattgtgg
    14641 gatctgatga gttccaccac cacctctaac gtgatgccga tgatgcacgt cgggctggat
    14701 aatttcgatc tggtgaaata tctggtgagt caggtgatgt tgagtgaaga ggatcgtttt
    14761 gaagcgttga aagagtacta tccgcaggcg aaaaaagagg actggcgttt gtggcaagcg
    14821 gggcagcgtg tgcagattat caagcgtgat gccgataaag gtggtgtact gcgtctgggt
    14881 actgaagtgg tcagtgacca gcaagggacc attgccgcgc tcctgggagc atcgccaggg
    14941 gcgtcaaccg ccgcgccgat tatgttggat ctgctggaaa aagtatttgg cgatcgcgtt
    15001 tccagcccgc aatggcaggc tacgttgaaa gcgatcgttc cgtcttatgg acgcaagctg
    15061 aacggtgatg tagcggcaac agaacgcgag ttgcagtaca ccagcgaagt gctggggctg
    15121 aaatacgaca agccgcaggc agcagatagt acgccaaaac cgcagttgaa accgcaaccc
    15181 gttcaaaaag aagtggcgga tattgcgttg taatgatgtg ccacatccgg catggtatgc
    15241 cggatgtggc gtatactgat aagacgcgcc agcgtcgcat caggcaaccg gctcgggcgt
    15301 tagatgttgg atgcggcgta accgccttat ccaaccaacg gggtgccgta cttcacaaca
    15361 gtttagcgaa cttctgcgtt gtcaattttc tcttccgcct tccagacgcg gtatttcaca
    15421 tctacattgt ctggcgtata caccacgatc ggcagcttgc tgttgtaacg cagcattcca
    15481 gcatcgccca gatacgcggt gacaaatttc ttctctttct tgccatccgg gcaggccatc
    15541 atcgtggaaa ccggcgagct aactttatca aagacataat aatcatagcc ccagccttcc
    15601 agcgttttgc tttccagctt cccgccgaga cgatgcaaat tgcaatcgac ttccagcgtc
    15661 tgaccgatta acagttctac tttcagggta gattcatctt cttgcggggt taactgaatc
    15721 acctgacgct tcatcccttt ttcagcttgt ggataaggcg cgattttttc cagtggctgg
    15781 acgctttctg ccgcccaggc ggaagtggta gcgaaagcgg caaacaatac tgcaggtaga
    15841 atggtcttca tttttttgct ttccttcttc atttataggt tttcaccgat gatgtcgctg
    15901 aaggttaaca tattcataag atttattaat ttgctttatg aataacttaa agaatattca
    15961 gacaatttta cctgctcttt tagtgttaaa ttctgatgag agaacaaacc agcagaaata
    16021 tctctggtga attaatcgct atataaatat gtttataacc atttgaaatg tgagcaaaag
    16081 cccgtttttg ccacgcttcc cgccactctt ttgatcctgc tacaggtttt accccgatcg
    16141 gggtatgcat ctttgacaca tcctttaata tcttagcggt tataaaaatg gcttattaat
    16201 tatgcggttt atttggtcgc tctcaatttt cagagcgcgt taatgatgga aggtcaatgt
    16261 gaagattgat gcatcccgtc ggggcatact cactggtcgc tggcgcaaag ccagtaacgg
    16321 tatccgtccg ccctggtccg gtgatgaatc tcattttctg acccattgca cccgttgcga
    16381 cgcctgtatt aatgcttgtg aaaacaacat tctgcaacgc ggcgcgggcg gctatccgag
    16441 cgttaatttc aaaaataacg agtgcagctt ctgttacgct tgcgcgcagg cttgccccga
    16501 atcgctattt tctccgcgcc acaccagggc ctgggatttg cagttcacca ttggggacgc
    16561 gtgcctggcg tatcagtcag ttgaatgccg ccgctgtcag gatagctgtg agccaatggc
    16621 aattatcttt cgcccgacgc tctccgggat ctaccagccg caacttaata gccaactttg
    16681 caacggatgt ggagcatgtg cagccagctg tccggtatca gccataactg cggagtatct
    16741 ccatgcacac taactggcaa gtttgcagcc tggtcgtgca ggccaaaagc gaacgaattt
    16801 cagacatcag cacccaactg aacgcctttc ccggctgtga agttgctgtc agcgacgcgc
    16861 cgagcggtca gttgattgtg gtggtggaag cagaagacag cgaaacgctg atccaaacca
    16921 ttgagtcagt acgcaacgta gagggcgtgc tggcggtgtc gctggtttat caccagcagg
    16981 aagagcaagg tgaggaaaca ccatgaaact cagtcgtcgt agctttatga aagctaacgc
    17041 cgttgcggcc gctgcggcgg ctgccggtct cagcgtgccg ggcgttgccc gcgccgttgt
    17101 tggtcagcag gaagccatca aatgggataa agcgccgtgc cgtttctgcg gtactggttg
    17161 cggcgttctg gtcggaacgc agcagggacg tgtggtggcc tgtcagggcg acccagacgc
    17221 accggttaac cgtggcctga actgcattaa gggctatttc ctgcccaaga tcatgtacgg
    17281 taaagaccgt ttgacgcagc cgctgctgcg tatgaaaaac ggtaaatatg acaaagaagg
    17341 cgaatttacc ctaatcacct gggatcaggc cttcgatgtg atggaagaga aattcaaaac
    17401 cgccctgaaa gaaaaagggc cggaatcgat cggtatgttc ggttctggtc agtggactat
    17461 ctgggaaggt tatgccgcgt ccaagctgtt taaagcgggc ttccgttcga acaacatcga
    17521 cccgaacgcg cgtcactgta tggcgtcggc agtagttggc tttatgcgta cctttggtat
    17581 ggatgagccg atgggctgct atgacgacat cgagcaggct gacgcgtttg tgctgtgggg
    17641 cgcaaacatg gcggagatgc acccgatcct ctggtcgcgc atcactaacc gtcgtctctc
    17701 taatcagaac gtcaccgtgg cggtgctttc tacctaccag catcgtagct tcgagctggc
    17761 ggataacggc atcatcttta cgccacagtc tgacctggtg atcctgaact acatcgccaa
    17821 ctatatcatt caaaacaatg cgataaatca ggacttcttc agcaaacacg ttaacctgcg
    17881 caaaggggcg acggacattg gctacggttt acgtccgacc catccgctgg aaaaagcagc
    17941 gaagaatcca ggttctgacg cctccgaacc gatgagcttt gaagattaca aagccttcgt
    18001 tgccgagtat acgctggaaa aaactgccga aatgaccggc gtgccgaaag accagttaga
    18061 acaactggcg cagctgtatg ccgatccgaa caagaaagtc atctcctact ggacgatggg
    18121 cttcaaccag catactcgtg gcgtgtgggc taacaacctg gtctacaacc tgcacctgct
    18181 gaccggcaaa atttcccagc cgggttgcgg tccgttctcc ctgaccgggc aaccttctgc
    18241 gtgtggtact gcgcgtgaag tgggcacctt tgctcaccgt ctgcctgcgg acatggtggt
    18301 gaccaacgag aaacaccgtg atatctgcga gaagaagtgg aatatcccga gcggcaccat
    18361 tccggcgaaa atcggtctgc acgcggtggc acaagaccgt gcgctgaaag acggcaaact
    18421 gaatgtttac tggaccatgt gtaccaacaa catgcaggcc gggccgaaca tcaatgaaga
    18481 gcgtatgccg ggctggcgcg atccgcgcaa cttcatcatc gtctccgatc cgtatccgac
    18541 agtcagtgcg ctggccgccg acttgatcct gccgaccgca atgtgggtag agaaagaggg
    18601 cgcttacggt aacgccgaac gccgtactca gttctggcgt caacaggtac aggcaccggg
    18661 cgaagcgaaa tcggatctct ggcagttagt ccagttctcc cgccgcttca aaactgaaga
    18721 agtatggccg gaagatctgc tggcgaagaa accggaactg cgtggcaaaa cgctgtacga
    18781 agtgctgtat gccacaccgg aagtgagcaa attcccggta tccgaactgg cggaagatca
    18841 gctgaacgat gaatcccgcg agctgggctt ctatctgcaa aaagggctgt tcgaagagta
    18901 cgcatggttt ggtcgcggtc acggtcacga tctggcaccg ttcgatgact accacaaagc
    18961 gcgcggtctg cgctggccgg tggtgaacgg taaagaaacg cagtggcgtt acagcgaagg
    19021 taacgacccg tacgtgaaag cgggcgaagg ctataagttc tacggcaaac cggatggcaa
    19081 agcggtgatc ttcgcactgc cattcgaacc ggcggcggaa gcaccggatg aagagtacga
    19141 cctgtggctc tctaccggac gcgttctgga gcactggcac accggcagta tgactcgccg
    19201 tgtaccagaa ctgcaccgcg ccttcccgga agcggtcctg tttattcacc cgctggatgc
    19261 gaaagcgcgc gatctgcgtc gtggcgacaa agtgaaagtg gtttctcgcc gtggcgaagt
    19321 gatctcgatt gtcgaaacgc gcggtcgtaa ccgtccgccg cagggcctgg tgtacatgcc
    19381 gttcttcgac gccgcacagc tggttaacaa actaacgcag gacgcgaccg atccgctctc
    19441 gaaagagacg gacttcaaga agtgcgcagt caaactggag aaggtgtaag ccattatgtc
    19501 ccggtcagcg aaacctcaaa atggtcgccg ccgctttctg cgcgatgttg ttcgcacagc
    19561 aggcgggctg gctgccgtgg gtgtggcgct ggggttacaa cagcaaaccg cacgcgcatc
    19621 tggcgtgcgg ttgcgcccgc ccggagccat aaacgagaac gcctttgcca gtgcctgtgt
    19681 gcgttgcggt cagtgtgttc aggcttgccc ttacgacacc ttaaaactgg cgacgctggc
    19741 ctctggtctg tcggcgggca cgccatattt tgtcgcacgg gatattcctt gcgaaatgtg
    19801 tgaggacatt ccgtgcgcca aagtgtgccc gagcggtgcg ctggatcgtg agatcgaatc
    19861 gatcgacgac gcgcggatgg ggctggcggt actggtggac caggaaaact gtctcaactt
    19921 tcaggggctg cgctgcgatg tttgttatcg cgaatgcccg aaaattgatg aggccatcac
    19981 cctggagctg gagcgcaaca cgcgtaccgg taagcacgcc cgctttctgc cgacggttca
    20041 cagagacgcc tgtaccggtt gcggtaagtg cgaaaaagtg tgcgtgctgg aacaaccggc
    20101 aatcaaggtg ttaccgctgt cactggctaa aggggagtta ggtcaccatt accgcttcgg
    20161 ctggctggag gggaacaatg gcaaatcgta aacgtgacgc cgggcgcgag gcgctggaga
    20221 aaaaaggctg gtggcgcagt caccgttggc tggtgttacg tcgcctttgt cagttcttcg
    20281 tgctggggat gtttttgagc ggtccgtggt ttggtgtgtg gatcttacac ggtaactaca
    20341 gcagtagcct gttattcgac accgttccgc tgaccgatcc gctgatgacg ctgcaaagtc
    20401 ttgccagcgg tcatctgcct gccacggtgg cgttgaccgg tgcggtgatt atcaccgtgc
    20461 tctacgccct ggcaggaaag cgattatttt gcagctgggt ctgcccgctg aatccgatta
    20521 ccgacttagc gaactggtta cgcaggcgct ttgacctcaa tcagtctgcg acgatccctc
    20581 gccacattcg ctacgtgctg ttggtggtca ttctgctggg atcggcctta actggcacgc
    20641 tcatctggga atggatcaac cccgtatctc tgatggggcg cagcctggta gtgggcttcg
    20701 gcagcggcgc gctgcttatt ctcgcgctgt ttttatttga tctactggtc gttgaacacg
    20761 gctggtgcgg gcacatttgt ccggttggcg cgctgtatgg cgtgctgggt agcaaaggtg
    20821 tgattaccgt tgcggccacc gatcggcaga aatgtaaccg ctgtatggat tgttttcatg
    20881 tttgcccgga accgcgtgtg ctacgtgccc cggtgctgga tgaacaaagc ccggtgcagg
    20941 tcaccagccg cgattgcatg acgtgcggtc gctgcgtgga tgtctgttct gaggatgtat
    21001 ttacaataac tacacgatgg agttcgggag cgaaatcatg aaaagccatg acctgaagaa
    21061 agcgctgtgt caatggacgg cgatgctggc cctggtggta agcggcgcgg tttgggcggc
    21121 taatggcgtc gattttagcc agtcgccgga agtatccggg acacaggaag gggccattcg
    21181 gatgccaaaa gagcaggaac ggatgccgct gaactatgtg aatcagccgc caatgatccc
    21241 gcatagcgtt gaaggttatc aggtaacgac caataccaac cgctgcttgc agtgccacgg
    21301 tgtcgaaagt tatcgcacca ctggcgcgcc gcgcattagt cctactcact ttatggacag
    21361 cgacggcaaa gtgggcgcgg aagtggctcc gcgtcgttat ttctgtctgc aatgtcacgt
    21421 accgcaggcc gataccgcgc caatcgtggg gaataccttt accccatcaa aaggttacgg
    21481 gaaataagag gttattatgg gaaattctga ccgtaagcct ggtctgatta agcgcctgtg
    21541 gaaatggtgg cgtaccccca gccgtctggc gctggggacg ctgctgttga tcggttttgt
    21601 tggcggcatc gtcttctggg gtggctttaa caccgggatg gaaaaagcca ataccgaaga
    21661 gttctgcatt agctgccacg aaatgcgcaa cacggtatat caggaataca tggattccgt
    21721 gcactacaac aaccgtagcg gcgtccgtgc gacctgtccg gattgtcacg ttccgcacga
    21781 gtttgtgccg aagatgatac gcaagctcaa agcaagtaaa gagctgtatg gtaaaatttt
    21841 tggcgttatt gacacgccgc agaaatttga agctcatcgt ctgacgatgg cacagaatga
    21901 gtggcggcgc atgaaggaca ataactcgca ggagtgccgt aactgtcaca acttcgagta
    21961 tatggataca accgcccaga aatcggttgc cgcgaagatg catgaccagg cggtgaaaga
    22021 tgggcaaacc tgtattgatt gccataaagg gatagcgcac aagctgcccg atatgcgtga
    22081 agtcgagcca ggtttttaac agggttattg cgtgggtatg cttgaagcca gagagttact
    22141 ttgtgagcag gatgaacgaa ccttatttag tggcttgtca tttacgctga acgcaggaga
    22201 gtgggtacaa atcaccggta gcaacggcgc ggggaagaca acgcttctcc gtttgctgac
    22261 ggggttgtct cgccctgacg caggcgaggt tctctggcaa gggcagccct tgcatcaggt
    22321 acgcgacagc taccatcaaa acctgttatg gataggccat cagccgggga tcaaaacccg
    22381 gctgacggcg ttagaaaatc tgcactttta tcatcgcgat ggcgataccg cacaatgtct
    22441 ggaagccctg gcgcaggccg ggcttgccgg attcgaagat attcctgtaa atcagctctc
    22501 ggccgggcaa caacgccgcg tcgctttagc gcgtctgtgg ctgacccgtg ccacgttatg
    22561 gatcctcgac gagcctttta ccgcgattga cgttaacggc gtcgatcgtc tgacccagcg
    22621 tatggcgcag catacggagc agggggggat tgtgattctg actacccacc agccgctcaa
    22681 cgttgctgaa agtaaaattc gccgcatttc actgacgcaa acgagggccg catgatgttc
    22741 tggcgcattt tccgtcttga gctgcgtgta gcgtttcgcc atagcgccga aatcgccaac
    22801 ccgctgtggt tcttcctgat tgtaattacc ctttttccgc tcagtatcgg tccggagccg
    22861 caactgctgg cgcgtattgc accgggcatt atctgggttg ctgcgctgct ttcatccttg
    22921 ctggcgctgg aacgactgtt ccgtgacgat ttgcaggacg gcagtcttga acaattgatg
    22981 ttgttgccgt tacccttgcc cgccgttgtg ctggcgaagg tgatggcgca ctggatggta
    23041 accggtctgc cgttactcat cctttcgcca ctggtagcaa tgctactggg aatggatgtt
    23101 tatggctggc aagtgatggc gctgacgctg ctgctgggaa cgcctacgct tggctttctc
    23161 ggtgcaccgg gtgtggcgtt gacagtggga cttaagcgcg gtggtgtgct gctcagcata
    23221 ctggtgttac cgctgactat cccattactc atctttgcca ccgccgcgat ggacgcggct
    23281 tccatgcatt tgcccgttga cgggtatctg gcaattttag gcgcgttgct ggcaggcacc
    23341 gcgacattaa gtccttttgc gacggcggca gcgttacgaa tcagcattca ataacgctgg
    23401 attactgatt tttgttcgag tctggtatcg aaactatgtg gaaaacactg catcaactgg
    23461 cgatcccacc acggctgtat caaatctgtg gctggtttat accgtggctg gcaattgcca
    23521 gtgtggtcgt gcttaccgtc ggctggatct ggggattcgg ctttgctccg gctgattatc
    23581 agcagggaaa tagctaccgc attatctacc tgcatgtgcc tgcggcgatc tggtcgatgg
    23641 gtatttatgc atcaatggcg gtggcggcgt ttattggcct tgtctggcag atgaaaatgg
    23701 ccaacctggc ggtggcggcg atggccccca ttggtgccgt gtttaccttt attgccctgg
    23761 ttaccggctc tgcatgggga aaaccgatgt ggggcacctg gtgggtatgg gatgcacgtc
    23821 tgacttctga actggtgctg ctgtttttgt atgtgggtgt gattgccctg tggcacgcct
    23881 tcgacgaccg ccgtctggcg ggccgtgcgg caggtatcct ggtgctgatt ggcgtggtga
    23941 atctgccgat tattcattac tccgtggagt ggtggaacac cctgcatcag ggatcaacgc
    24001 ggatgcagca aagtatcgat ccggcgatgc gttcgccgct gcgctggtcg atttttggct
    24061 tcctgctcct gtctgccacg ctgacgctga tgcggatgcg taatttgatt ttgctgatgg
    24121 aaaaacgccg tccgtgggtg agtgaactga tactgaaaag aggccgtaaa tgacccttgc
    24181 atttgcttcc tggaatgaat ttttcgcaat gggcggttac gccttttttg tctggctggc
    24241 ggtggtgatg accgttattc cgctggtggt tttggtcgtg cactcggtga tgcagcatcg
    24301 cgcaattctg tgtggtgtgg agcaacagcg ggcgcgtgag gcgcgtttac gtgctgcgca
    24361 acagcaggag gctgcatgaa tattcgccgt aaaaaccgct tgtggattgc ctgtgctgtg
    24421 ttggcaggtt tggcgctgac catcggtctg gtgctgtatg cgctgcgctc gaatatcgat
    24481 ctcttttata cgccggggga aattctctac ggcaagcgtg aaactcagca aatgccggaa
    24541 gtcggtcagc gtctgcgcgt tggcgggatg gtgatgccgg gtagtgtgca gcgcgatccc
    24601 aattcgctga aagtgacctt caccatttac gacgctgaag gctcagtgga tgtctcttac
    24661 gaaggcattt tgccggatct gttccgtgaa gggcagggcg ttgtggtgca gggcgagctg
    24721 gaaaaaggca atcatatcct cgcgaaagaa gtgctggcga aacacgacga aaactacacg
    24781 ccgccagaag ttgagaaagc gatggaagct aaccaccgtc gcccggcgag tgtttataag
    24841 gacccagcat catgatgccg gaaattggaa acgggctgct gtgcctggcg ctgggaattg
    24901 cgctgctgct gtccgtgtat ccgctatggg gcgtggcgcg cggagatgcg cgcatgatgg
    24961 cgtcttcccg cttgtttgcc tggctgctgt ttatgtctgt ggctggcgca tttctggtgc
    25021 tggtcaatgc tttcgtggtc aacgacttta ccgtcaccta tgttgccagc aactccaata
    25081 cccagcttcc ggtgtggtat cgcgtggcgg ctacctgggg cgcgcatgaa ggttcgcttc
    25141 tgctgtgggt gctgctgatg agcggctgga cctttgcggt ggcgattttt agtcagcgta
    25201 ttccgctgga tattgtggcc cgtgtactgg cgataatggg gatggtcagc gtcggctttt
    25261 tgctgttcat tctctttacc tctaacccgt tctcacgcac gctgccgaac ttcccaattg
    25321 aagggcgcga tcttaacccg ctgttacagg atccggggct gatcttccat ccgcctctgc
    25381 tttatatggg gtacgtgggt ttctcggtgg cgtttgcttt tgccattgct tctttgctga
    25441 gcgggcgtct ggacagcact tatgcgcgtt ttactcgccc gtggacgctg gcggcgtgga
    25501 ttttcctgac gctcggcatt gtgctcggtt ccgcatgggc ctattacgaa ctcggctggg
    25561 ggggctggtg gttctgggat ccggtagaaa acgcctcgtt tatgccgtgg ctggtgggga
    25621 ctgcgctgat gcactcactg gcggtcactg aacaacgcgc cagcttcaaa gcgtggacat
    25681 tactgctggc aatcagtgcc ttctcgttgt gtctgctggg gactttcctg gtgcgttccg
    25741 gcgtgctggt atcggtacac gcgtttgcct ctgatccggc acgcggtatg tttatcctcg
    25801 cctttatggt actggtgatt ggtggttcgc tgctgctgtt tgccgcgcgt ggacacaaag
    25861 ttcgctcacg cgtaaacaat gcgctgtggt cgcgggaatc tctgctgtta gcgaacaacg
    25921 ttttgttggt cgccgcgatg ctggtggtat tactggggac gctgctgccg ctggtgcaca
    25981 agcaactggg actgggcagt atttcgattg gcgaaccgtt cttcaacacc atgtttacct
    26041 ggctgatggt gccgtttgcg ctgctgcttg gtgtcggtcc tctggtgcgc tgggggcgcg
    26101 atcgcccacg taaaatccgc aatttattga ttatcgcctt catctcaacg ctggtgctgt
    26161 cgctgctgct gccgtggctg ttcgaaagca aagttgtggc gatgacggtg ctcggcctgg
    26221 caatggcctg ctggattgct gtgctggcaa ttgcggaagc tgcgctgcgt atttcacgtg
    26281 gcacgaaaac caccttcagt tattggggaa tggtggcggc tcacctgggg ctggcagtga
    26341 caattgttgg tattgccttt agccagaact atagcgttga gcgtgatgtg cgcatgaagt
    26401 ccggcgatag cgtcgatatt catgaatatc gcttcacctt ccgtgatgtc aaagaggtga
    26461 ctggcccgaa ctggcgcggc ggtgtggcga ctattggcgt aacgcgagag ggtaaaccgg
    26521 aaacggtgct gtatgcggaa aaacgttatt acaacactgc cgggtcgatg atgaccgaag
    26581 cggcgattga cggcggcatc acgcgtgacc tgtacgccgc gctcggtgaa gagctggaaa
    26641 acggcgcgtg ggccgtgcgt ctttactaca aaccgtttgt tcgctggatt tgggcgggcg
    26701 ggctgatgat ggcgttgggc ggactgctgt gtctgtttga tcctcgctat cgtaagcgcg
    26761 tgagtccgca aaaaactgcg ccggaggctg tatgaagcgc aaagtattgt taattccgtt
    26821 gattatcttc ctggcgattg ccgcggcgct gctgtggcag ctggcgcgta atgccgaagg
    26881 ggatgatccg accaatctgg aatcggcgct cattggcaag ccagtgccga agtttcgcct
    26941 cgaatcactg gacaatccgg ggcagtttta tcaggcggat gtgctgactc agggcaaacc
    27001 tgtgctgctt aacgtttggg ctacctggtg tccgacctgc cgtgcggaac atcaatatct
    27061 gaatcagctt tctgcgcagg gcattcgcgt ggtcggcatg aactataaag acgatcgcca
    27121 gaaggcaata agctggctga aagagctggg caatccttac gcgctaagcc tgtttgatgg
    27181 cgatggcatg ttagggctgg atctcggtgt ctatggcgcg ccagaaacgt tcctcatcga
    27241 cggcaacggc atcattcgct atcgccatgc gggcgatctc aatcctcgcg tctgggaaga
    27301 agagatcaag ccgctgtggg agaaatacag taaggaggcc gcacaatgag gtttttattg
    27361 ggcgtgctga tgctgatgat ctccggctca gcgctggcga ccatcgacgt gttgcagttt
    27421 aaggatgaag cgcaggagca gcagttccgc caactcactg aagaactacg ctgcccgaaa
    27481 tgccagaaca acagcattgc cgattccaac tcgatgattg ccaccgacct gcgccagaaa
    27541 gtgtatgaac tgatgcagga aggtaaaagt aaaaaagaga ttgtcgatta tatggtggcg
    27601 cgttacggca acttcgtcac ttacgatccg ccgttaacgc cgctgaccgt gctgctgtgg
    27661 gtgcttccgg tagtggctat tggcattggc ggttgggtca tttacgcccg ttcgcggcgt
    27721 cgggtacgcg tggtgccgga cgcgtttcct gaacaaagcg tgccggaagg taagcgtgcc
    27781 ggatatattg tttatctgcc gggtattgtg gtggcgttaa ttgtggctgg cgtcagctac
    27841 taccagactg gcaattatca gcaggtgaaa atctggcagc aggccacggc acaggctccg
    27901 gcgttgctgg acagggcgct ggatccgaaa gccgatccgc tcaacgaaga agagatgtcg
    27961 cgtcttgcgc tggggatgcg tactcaactg caaaaaaatc cgggagatat agaaggctgg
    28021 attatgttgg gccgcgttgg catggcgctg ggtaacgcca gtatcgccac cgatgcatac
    28081 gctactgcgt atcgcctcga tccgaaaaac agtgatgccg cactgggtta tgctgaagcg
    28141 ttgacacgtt catctgatcc caacgacaac cgcctcggtg gtgaactgct gcgccagttg
    28201 gtgagaacgg accatagcaa tatccgtgtg ttaagcatgt atgcgtttaa tgcctttgag
    28261 cagcagcgat ttggcgaagc cgttgccgcg tgggagatga tgttgaaact cttatctgcc
    28321 aacgatactc gccgtgcggt gattgaacgt agtatcgcgc aggcgatgca acatttgtcg
    28381 ccgcaggaga gtaaataaaa agaggcccga tggtgatgcc atcgggctat ttttattgtg
    28441 ccccgcgttg ttgcaggaac agaatggtgg ctgccacgcg tgagcggaca ttgagtttgc
    28501 gcagcagatt gcgaatatgt acttttactg tctgctctga aatattcaac accgaggcaa
    28561 tctgtttatt tgacagcccc tgtgccagct cgtgcagaac atccagctcg cgctccgtca
    28621 gcacgctgaa gggatcttct tccgcgccaa acatttcacg ttcacgtaag tactgattga
    28681 cgcgttcgct aaagactttg ctgcctttcg ctccagcacg aattgcttcc agcaatactt
    28741 ccgggtcgct gtctttcaac agataaccgt ctgcgcctgc gtctatcagc gcaaagacat
    28801 cgctggaggc atctgatacg gtcaggataa taatttgcgc ggtaacgcca tccctgcgca
    28861 aggcattgag ggtatccagg ccactcatac ctttcatatt gagatccagc aagatcacgt
    28921 cgatatccag tctatttgcc agatcgatcg cgctcgcgcc gtcgcccgct tcggcgacca
    28981 cttcaaagct aggatcaagc tccagtaact gacgaacacc gcgtcgcata agtggatgat
    29041 catccacaat catcacctga aaaggcgttg cttcaggcat agtagtctcc tggggtttta
    29101 ttagaatcat tatgtttgag cgt
//
LOCUS       DAJVUK010000034        29057 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.034, whole genome shotgun sequence.
ACCESSION   DAJVUK010000034 DAJVUK010000000
VERSION     DAJVUK010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29057
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.034"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            162..605
                     /locus_tag="OQQ57_001431"
     CDS             162..605
                     /locus_tag="OQQ57_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004997737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1956249.1"
                     /translation="MDLALVTGQREGDLAAMRWEDIRDGRLYVEQQKTGAKIRISLPT
                     TISRLNLTLTDVLDNLKKINGKNEKLLGGKTARTIAAQFRIARDTSGLKWEGDPPPFH
                     EIRSLSGRLHSAEKGSDFTQALLGHRSSSMTDKYRDGRGREWKDI"
     gene            841..1659
                     /gene="ybhA"
                     /locus_tag="OQQ57_001432"
     CDS             841..1659
                     /gene="ybhA"
                     /locus_tag="OQQ57_001432"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyridoxal
                     phosphate/fructose-1,6-bisphosphate phosphatase"
                     /protein_id="HCS1956250.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDMPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            complement(1660..2718)
                     /gene="modC"
                     /locus_tag="OQQ57_001433"
     CDS             complement(1660..2718)
                     /gene="modC"
                     /locus_tag="OQQ57_001433"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HCS1956251.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMA
                     KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
                     IKPGLWLYAQIKSVSITA"
     gene            complement(2721..3410)
                     /gene="modB"
                     /locus_tag="OQQ57_001434"
     CDS             complement(2721..3410)
                     /gene="modB"
                     /locus_tag="OQQ57_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HCS1956252.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            complement(3410..4183)
                     /gene="modA"
                     /locus_tag="OQQ57_001435"
     CDS             complement(3410..4183)
                     /gene="modA"
                     /locus_tag="OQQ57_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1956253.1"
                     /translation="MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQ
                     TLLGNSLVVVAPKASEQKDFIIDSTTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            complement(4349..4498)
                     /gene="acrZ"
                     /locus_tag="OQQ57_001436"
     CDS             complement(4349..4498)
                     /gene="acrZ"
                     /locus_tag="OQQ57_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump accessory protein AcrZ"
                     /protein_id="HCS1956254.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            4627..5415
                     /gene="modE"
                     /locus_tag="OQQ57_001437"
     CDS             4627..5415
                     /gene="modE"
                     /locus_tag="OQQ57_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HCS1956255.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNANNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            5483..6955
                     /gene="modF"
                     /locus_tag="OQQ57_001438"
     CDS             5483..6955
                     /gene="modF"
                     /locus_tag="OQQ57_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HCS1956256.1"
                     /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKILLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQHLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
     gene            7216..8232
                     /gene="galE"
                     /locus_tag="OQQ57_001439"
     CDS             7216..8232
                     /gene="galE"
                     /locus_tag="OQQ57_001439"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HCS1956257.1"
                     /translation="MRVLLTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGIGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            8242..9288
                     /gene="galT"
                     /locus_tag="OQQ57_001440"
     CDS             8242..9288
                     /gene="galT"
                     /locus_tag="OQQ57_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HCS1956258.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNHDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            9292..10440
                     /gene="galK"
                     /locus_tag="OQQ57_001441"
     CDS             9292..10440
                     /gene="galK"
                     /locus_tag="OQQ57_001441"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HCS1956259.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLAEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
     gene            10434..11474
                     /gene="galM"
                     /locus_tag="OQQ57_001442"
     CDS             10434..11474
                     /gene="galM"
                     /locus_tag="OQQ57_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HCS1956260.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            11676..12428
                     /gene="gpmA"
                     /locus_tag="OQQ57_001443"
     CDS             11676..12428
                     /gene="gpmA"
                     /locus_tag="OQQ57_001443"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HCS1956261.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="OQQ57_001444"
     CDS             complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="OQQ57_001444"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HCS1956262.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            13954..14334
                     /locus_tag="OQQ57_001445"
     CDS             13954..14334
                     /locus_tag="OQQ57_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgS-like family protein"
                     /protein_id="HCS1956263.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            14448..15389
                     /gene="zitB"
                     /locus_tag="OQQ57_001446"
     CDS             14448..15389
                     /gene="zitB"
                     /locus_tag="OQQ57_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HCS1956264.1"
                     /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSIVVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHAHDALLDQIQHYL
                     MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(15386..16105)
                     /gene="pnuC"
                     /locus_tag="OQQ57_001447"
     CDS             complement(15386..16105)
                     /gene="pnuC"
                     /locus_tag="OQQ57_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HCS1956265.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMLLMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSCALSH"
     gene            complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="OQQ57_001448"
     CDS             complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="OQQ57_001448"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HCS1956266.1"
                     /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
                     TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
                     ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
                     PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP
                     LNRMLDFAATLRG"
     gene            complement(17435..17510)
                     /locus_tag="OQQ57_001449"
     tRNA            complement(17435..17510)
                     /locus_tag="OQQ57_001449"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17475..17477),aa:Lys,seq:ttt)
     gene            complement(17657..17732)
                     /locus_tag="OQQ57_001450"
     tRNA            complement(17657..17732)
                     /locus_tag="OQQ57_001450"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17697..17699),aa:Lys,seq:ttt)
     gene            complement(17736..17811)
                     /locus_tag="OQQ57_001451"
     tRNA            complement(17736..17811)
                     /locus_tag="OQQ57_001451"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17776..17778),aa:Val,seq:tac)
     gene            complement(17863..17938)
                     /locus_tag="OQQ57_001452"
     tRNA            complement(17863..17938)
                     /locus_tag="OQQ57_001452"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17903..17905),aa:Lys,seq:ttt)
     gene            complement(17941..18016)
                     /locus_tag="OQQ57_001453"
     tRNA            complement(17941..18016)
                     /locus_tag="OQQ57_001453"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17981..17983),aa:Val,seq:tac)
     gene            complement(18052..18127)
                     /locus_tag="OQQ57_001454"
     tRNA            complement(18052..18127)
                     /locus_tag="OQQ57_001454"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18092..18094),aa:Lys,seq:ttt)
     gene            complement(18292..19083)
                     /gene="cpoB"
                     /locus_tag="OQQ57_001455"
     CDS             complement(18292..19083)
                     /gene="cpoB"
                     /locus_tag="OQQ57_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HCS1956267.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
     gene            complement(19093..19614)
                     /gene="pal"
                     /locus_tag="OQQ57_001456"
     CDS             complement(19093..19614)
                     /gene="pal"
                     /locus_tag="OQQ57_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HCS1956268.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            complement(19649..20941)
                     /gene="tolB"
                     /locus_tag="OQQ57_001457"
     CDS             complement(19649..20941)
                     /gene="tolB"
                     /locus_tag="OQQ57_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HCS1956269.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPSAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            complement(21074..22255)
                     /gene="tolA"
                     /locus_tag="OQQ57_001458"
     CDS             complement(21074..22255)
                     /gene="tolA"
                     /locus_tag="OQQ57_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HCS1956270.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA
                     KKAAADAKKKAEAEAAKAAAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEKAK
                     AEAEKKAAAEKAAADKKAAADKKAAEKAAAEKAAADKKAAAEKAAAEADDIFGELSSG
                     KNAPKTGGGAKGNNASPAGSGNSKNNGASGADINNYAGQIKSAIESKFYDASSYAGKT
                     CTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFK
                     P"
     gene            complement(22320..22748)
                     /gene="tolR"
                     /locus_tag="OQQ57_001459"
     CDS             complement(22320..22748)
                     /gene="tolR"
                     /locus_tag="OQQ57_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HCS1956271.1"
                     /translation="MARARGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            complement(22752..23444)
                     /gene="tolQ"
                     /locus_tag="OQQ57_001460"
     CDS             complement(22752..23444)
                     /gene="tolQ"
                     /locus_tag="OQQ57_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HCS1956272.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            complement(23441..23845)
                     /gene="ybgC"
                     /locus_tag="OQQ57_001461"
     CDS             complement(23441..23845)
                     /gene="ybgC"
                     /locus_tag="OQQ57_001461"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HCS1956273.1"
                     /translation="MNTTLFRWPARVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            complement(23995..24288)
                     /gene="ybgE"
                     /locus_tag="OQQ57_001462"
     CDS             complement(23995..24288)
                     /gene="ybgE"
                     /locus_tag="OQQ57_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HCS1956274.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIIGLIFFFF"
     gene            complement(24288..24401)
                     /gene="cydX"
                     /locus_tag="OQQ57_001463"
     CDS             complement(24288..24401)
                     /gene="cydX"
                     /locus_tag="OQQ57_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HCS1956275.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            complement(24416..25555)
                     /gene="cydB"
                     /locus_tag="OQQ57_001464"
     CDS             complement(24416..25555)
                     /gene="cydB"
                     /locus_tag="OQQ57_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCS1956276.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            complement(25571..27139)
                     /gene="cydA"
                     /locus_tag="OQQ57_001465"
     CDS             complement(25571..27139)
                     /gene="cydA"
                     /locus_tag="OQQ57_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415261.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HCS1956277.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            complement(27987..>29057)
                     /locus_tag="OQQ57_001466"
     CDS             complement(27987..>29057)
                     /locus_tag="OQQ57_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HCS1956278.1"
                     /translation="IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVI
                     RYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPT
                     PFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAV
                     FSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLS
                     CRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMP
                     PVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEEN
                     QGSNLSGPFLPGQSRTFSYRLA"
BASE COUNT         7341 a         7638 c         7086 g         6992 t
ORIGIN      
        1 acatttttaa aacagctata gcttctggtc ttgccgaaga agatccagct tctgcaacca
       61 ggccattcag aactgaagtg aagcgcagtc gactgttaat tgacgagtat ctgttaatca
      121 ggaaaatagc agacgtccag aacgaatggt tcggcctttg catggatctt gcactggtaa
      181 caggacagcg cgaaggagat ctggcggcta tgagatggga ggatataaga gatggcagac
      241 tatacgtgga acaacaaaaa acaggggcaa aaattcgcat ttctctcccc accacgattt
      301 ccagattgaa tttaacactt accgatgtac tggataactt gaaaaaaata aacggtaaaa
      361 acgaaaagtt actcggaggg aagacagcca ggacaatcgc agcacagttc aggattgccc
      421 gagacacatc cggattgaaa tgggaaggtg acccaccgcc atttcatgaa atccgaagtt
      481 tatccggtcg cctgcactca gcagaaaaag gcagtgattt cactcaggcg ctccttggac
      541 atcgttcatc cagcatgacg gataaatacc gtgacggacg agggagggaa tggaaagaca
      601 tttagaatta atttcgaatg ttttcgaaac accacttgta attaattgat tataaaggat
      661 taattcctaa gaggcatttg cttcatgaat gctcctttgc atttagcaac tgactgtaac
      721 agctaaaatt agtcgctttt ggcggtgaat gctgaattaa aacgcagaat tttgtccgat
      781 agtggtatcg gtgtaccatt cgcgcagacg aaaattctta accttaatct ggaatacgcc
      841 atgaccacac gcgtgattgc tctcgactta gacggcacct tattgacccc gaaaaagacc
      901 ctgcttcctt catcgataga agccctggcc cgcgctcgcg aagcaggcta tcaattaatc
      961 atcgtcacag gtcgccatca cgtcgctatt catccttttt atcaggcgct ggcgctggat
     1021 acacctgcta tttgctgtaa tggcacctat ttgtatgatt atcatgcaaa aaccgtgctg
     1081 gaagcggacc caatgcccgt taataaagcc ctgcaactca ttgagatgct gaatgaacac
     1141 cacattcacg gtctgatgta tgtggatgat gcaatggtct atgagcaccc gaccgggcat
     1201 gtcattcgca cgtctaactg ggcgcaaacc ctgccgccgg aacagcgtcc gactttcaca
     1261 caagtcgctt ctctggctga aacggcgcaa caagttaacg ccgtatggaa gttcgccctg
     1321 acgcacgatg acatgccgca attgcagcat tttggtaagc atgtcgaaca tgaactggga
     1381 ctggagtgtg aatggtcctg gcacgatcag gttgatattg cacgcggcgg caacagcaaa
     1441 ggtaaacgtt tgacgaaatg ggttgaggcg caaggctggt cgatggaaaa cgtcgtggcg
     1501 ttcggcgata actttaatga tatcagtatg ctggaggccg ctggtacagg cgtggcgatg
     1561 ggcaacgccg atgacgcggt aaaagcgcgc gccaacattg tgattggtga taacaccacc
     1621 gacagcattg cccagttcat ttatagccac ctgatttaat caggcggtta tcgacacact
     1681 tttaatttgc gcgtacagcc acaggcctgg tttgatcgcc agttcatccc tggcccacgg
     1741 gctgatacgc gcccacagcg ttttaccgcc gacttccagc tccacttcca cctgaccgtt
     1801 gtcgtcataa ctattaacaa cttttgcccg caatacgtta cgaatgctgg tttgctgcgg
     1861 cggttgtaaa accagagaaa catcggaagc ctgaatgcgg atacgtagcg cagcttgcag
     1921 cggttcgtcc agcttattga cccacaaatg ctgatcgccc agcgccagcg cggtcatcgc
     1981 gtaatgcgga tgatgctcaa gcaccgtcac tttcagaatg ctactttgtt gctctttcgg
     2041 cagccacgga ttcatcacgc tactacccca gacttcttcc agtgcgccaa aggctttcac
     2101 ctgaccgttt tccagtacca tcactctgtc tgccagatgg aggatctcat ccagcgaatg
     2161 gctgacatac aacatcggga tgttgatttc ccgcgtcaga cgttgcagat aaggcaacag
     2221 ttcgcgttta cgcggaatat ccagtgacgc cagcggttca tccagcaaca gcaattctgg
     2281 tgccgtcagc aaagcccgcc caatcgctac gcgctgtttt tcgcctccgg acaggctgcc
     2341 tggtaaacgg tcaagcaacg gttcaatgcc taaaagcgcc accagcttat cgaactgatc
     2401 gaccatgctt ttcgccatgc cgtagcgcag attgccacgc actttgtaat gcggaaacag
     2461 ccgcgcatcc tgaaaaacat agccaacgcg acgcttttct ggcgtcaggc agataccttt
     2521 ttcggcatca tttagtaccc gaccattgag gacaatcctc cctttttgcg ggcgcgtcag
     2581 tccactgatg gcgttaatca gcgaagtttt tccggcaccg gagacgccaa agatagcagt
     2641 gatgccattg gcgggcagcg tttcattaat agtcaggcaa tggttgccca acgtctggga
     2701 aaaattcagt tccagcatga ttagcgcccc gcccgttcac ggctgattct ggccagccat
     2761 tctgaaatca acagggagat catcgccagc gcaatagaaa taatgcacag tctcgccgcg
     2821 ccactttccc cgccgggggt ctggatcagg gtatacatgg cagagggaat ggttcgcgtt
     2881 tcgccaggaa tgttcgacac aaaggtgatg gttgcaccaa actcaccgag agaacgagca
     2941 aaagccagta ccgtaccaac aataattccc ggtaaggtca gcggtaacgt gatagtaaag
     3001 aaaacgcgcc agcgcccggc acctagtgtt cttgcggcct gttcgagttt gacatcaacc
     3061 ccttccagcg ccagacgaat tgcccgcacc atcagcggaa acgacatgac ggcggcagcg
     3121 agaaccgcgc cgcgccagct aaaggcgaag gtaataccaa accagtcata cagacgttca
     3181 ccgataaatc cgcgccgtcc catcgaaact aataataagt aaccgacgac cacgggcggt
     3241 aacaccagcg gtagatgcag tacgctgtcg agcagagctt tgcccggaaa cgtgcaacgc
     3301 accagtaacc aggcaaaaaa gatcccaaac ggcaggctaa acagcacagc cagggaagaa
     3361 actttcaggc ttaataaaac tgcctgccat tctggatcgg tcagtatcat tacttggttg
     3421 taaatccgta acgtttaaag atttccgctg cctgcggtcc cttcagataa tcataaaatg
     3481 ctttcactgt cgcattgtta tgcccttcca caacagcaac cggatattcc acttttttat
     3541 gtgaatcttc cgggaaggtg gcaaccactt ttaccccttt gctgacaact gcgtcagaac
     3601 cgtaaacaat gcccaacggc gcttcattgc gttcgaccaa cgccagcgcg ccacgaacat
     3661 cttccgccgg agccaatttc ggggagagcg tatcccatgc gcccagtttt tgcagtgctt
     3721 cttttgcata aatgccagca gggacatgtt ccggatcgcc aaccgcgagg cgaccgccat
     3781 tcagcagcga agtccagtta gttgtgctgt cgatgatgaa atctttctgc tcgctggctt
     3841 tcggtgctac aacgaccagg ctattgccga gcagtgtctg gcgcgaagcc gtatcgatcg
     3901 cttttttatc aaccgcataa tccatccatt tctgatcggc agagataaac agatccgcag
     3961 gcgctcccgc ttcaatctga cgggccagag tagatgacga agcgaaagaa gaaaccacat
     4021 ccacgccttt ttctttttta tactgcgtag caatgtcctg cattgcgtta gtcagtgatg
     4081 cggcggcgaa caccgtgatt ttcccttcat ctgccagtgt attgccagca acagcgaaag
     4141 agagtgccgc cccggcaaac aagttcaacc atttacgagc cattggtaac cccttaatgt
     4201 aacgttatat aggtgacaat ataacggcta actcagaatt ttcccagcag ttattgctaa
     4261 cctttgtgag gtagataaga aaaaatatcg gctggaaaag caggaagttg agaaaaagaa
     4321 atgcccgact aagtgggcat tcagggaatc aatgattttg tccgggctgg tcttttttac
     4381 caacaccaga aaagatgttg aatacttcac caagaccgta aatcagaccc aggatgatgg
     4441 ccatcacgac aggtaccatg attacggcga ataccagact ttttaataac tctaacatgg
     4501 tcaactccag atatagtcat gagactattc taaccgctaa gcacagaaaa gcactcccct
     4561 tttgtgcggt cagctttgcg tggcgttcgt tttccgtcac aataagactt ttgccaggac
     4621 attgttatgc aggccgaaat ccttctcacc cttaagctcc aacaaaaatt attcgccgac
     4681 ccgcgccgga tttcgctact aaaacacatt gcgctttccg gttccattag ccagggagcg
     4741 aaagatgccg gtatcagcta taaaagcgcc tgggatgcca ttaacgagat gaatcagtta
     4801 agcgagcata ttctggttga gcgcgcaaca ggcggtaaag gtggcggcgg cgcagtactg
     4861 acccgctatg gtcagcgact gattcagctc tatgacttac tggcgcaaat ccagcaaaaa
     4921 gcctttgatg tgttaagtga cgatgacgcc ctgccgctga acagcctgct ggccgcgatc
     4981 tcacgttttt cactgcaaac cagcgcccgt aaccagtggt tcggtaccat caccgcccgc
     5041 gatcatgatg acgttcaaca gcatgttgat gtcttactgg ctgacggaaa aacacgcctg
     5101 aaagtcgcaa ttaccgcaca aagcggcgca cgtctggggc tggatgaagg caaagaagtg
     5161 ttgatattgc taaaagcgcc gtgggtaggc attactcagg acgaagcggt cgcacaaaac
     5221 gccaacaacc aattaccggg tattattagt catattgagc gcggcgcaga gcagtgcgaa
     5281 gtattaatgg cgctacccga cgggcaaaca ctgtgcgcca cagtgccggt aaatgaagcg
     5341 acttctcttc agcaagggca gaatgtcacg gcctacttta atgccgacag cgtgattatc
     5401 gccacgctgt gctaagcgtg ttgacaattt gttatgaaac acgtatccct gtcagtaatc
     5461 gctgcacaaa atgggatata aaatgtcatc gttgcaaatt ttgcaaggca cgtttcgtct
     5521 tagcgacaca aaaacgctgc aattgcctca gctaacgtta aacgcgggtg atagttgggc
     5581 gtttgtcggt tcgaatggaa gcgggaaatc ggccctggcc cgcgcgctgg cgggggaact
     5641 tccgcttttg aaaggtgaac ggcaaagcca gttttcccac atcactcgtc tctccttcga
     5701 gcaattgcaa aaactcgtca gcgacgaatg gcagcggaat aacaccgata tgctcggccc
     5761 tggcgaagat gacaccggac gcactacggc tgagatcatt caggatgaag taaaggatgc
     5821 accgcgttgc atgcaactgg cgcagcagtt cggtattacc gccctcctcg accgacgctt
     5881 taaatacctt tccactggcg agacgcgaaa aatcctgctg tgtcaggcgc tgatgtcgga
     5941 gcctgacttg ttgattcttg atgagccgtt cgatggcctg gatgttgcct cacgtcagca
     6001 gctggctgag cgactcgcct cgttacatca gtccggtatt actctggtac tggtgctcaa
     6061 tcgcttcgat gagatcccgg agtttgtcca gtttgctggc gtgctggcgg attgcacgtt
     6121 agcggaaact ggcgctaaag aggaactgct ccaacaagca ctcgtcgcgc aactggcaca
     6181 tagtgaacag cttgaaggtg tgcaactgcc ggagccggat gaaccttcag cacgtcacgc
     6241 cttacccgcc aacgaaccgc gcattgtgct gaacaatggc gtggtttctt ataacgatcg
     6301 ccccattctt aataacctta gctggcaggt gaatccaggt gaacactggc aaattgtcgg
     6361 gccaaatggt gcaggaaaat cgacgttatt aagcctggtt actggcgatc atccgcaagg
     6421 ttacagcaac gatttgacgc ttttcggacg acgtcgcggc agcggcgaaa ccatctggga
     6481 tatcaaaaag catatcggtt acgtcagcag tagtttgcat ctggattacc gggtcagcac
     6541 taccgtgcgt aatgtgattc tttctggcta ttttgattcg attggcattt atcaggccgt
     6601 ttcggatcgc cagcaaaaac tggtgcagca gtggctggat attctcggca ttgataaacg
     6661 tacggctgac gctccgttcc atagtctttc ctggggacag cagcatctgg cgctgatcgt
     6721 ccgcgcactg gtgaaacatc cgacgttgct tattctcgat gaaccactac aggggcttga
     6781 tccgctcaat cgccagctta tccgccgttt tgttgatgtg ctgattagcg aaggtgaaac
     6841 gcaattgttg tttgtttcgc accacgctga agatgcgcct gcctgtatta cccatcgcct
     6901 tgagttcgtg ccggacggtg gactctatcg ctatgtgctg acaaaaatat attgagtcgg
     6961 tagtgctgac cttgccggag gcggcctaag cgccctctcc ggccaacggt tcgacgcatg
     7021 caggcatgaa accgcttctt ttttcagata aaaagcgcaa tcattcataa accctctgtt
     7081 ttataatcac ttaatcgcgc ataaaaaacg gctaaattct tgtgtaaacg attccactaa
     7141 tttattccat gtcacacttt tcgcatcttt gttatgctat ggttatttca taccataagc
     7201 ctaatggagc gaattatgag agttctgctt accggtggta gcggttacat tggaagtcat
     7261 acctgcgtgc aattactgca aaacggtcat gatgtcatca ttcttgataa cctctgtaac
     7321 agtaagcgca gcgtactgcc tgttatcgag cgtttaggcg gcaaacatcc aacgtttgtt
     7381 gaaggcgata ttcgtaacga agcgttgatg accgagatcc tgcacgatca cgctatcgac
     7441 accgtgatcc acttcgccgg gctgaaagcc gttggcgaat cggtacaaaa accgctggaa
     7501 tattacgaca acaatgtcaa cggtactctg cgcctgatta gcgccatgcg cgccgctaac
     7561 gtcaaaaact ttatttttag ctcctccgcc accgtttatg gcgatcagcc caaaattcca
     7621 tacgttgaaa gcttcccgac cggcacaccg caaagccctt acggcaaaag caagctgatg
     7681 gtggaacaga tcctcaccga tctgcaaaaa gcccagccgg actggagcat tgccctgctg
     7741 cgctacttca acccggttgg cgcgcatccg tcgggcgata tgggcgaaga tccgcaaggc
     7801 attccgaata acctgatgcc atacatcgcc caggttgctg taggccgtcg cgactcgctg
     7861 gcgatttttg gtaacgatta tccgaccgaa gatggtactg gcgtacgcga ttacatccac
     7921 gtaatggatc tggcggacgg tcacgtcgtg gcgatggaaa aactggcgaa caagccaggc
     7981 gtacacatct acaacctcgg cgctggcata ggcagcagcg tgctggacgt ggttaatgcc
     8041 ttcagcaaag cctgcggcaa accggttaac tatcattttg caccgcgtcg cgagggcgac
     8101 cttccggcct actgggcgga cgccagcaaa gccgaccgtg aactgaactg gcgcgtaacg
     8161 cgcacactcg atgaaatggc gcaggacacc tggcactggc agtcacgcca tccacaggga
     8221 tatcccgatt aaggaacgac catgacgcaa tttaatcccg ttgatcatcc acatcgccgc
     8281 tacaacccgc tcaccgggca atggattctg gtttcaccgc accgcgctaa gcgcccctgg
     8341 cagggggcgc aggaaacgcc agccaaacag gtgttacctg cgcacgatcc agattgcttc
     8401 ctctgcgcag gtaatgtgcg ggtgacaggc gataaaaacc acgattacac cgggacttac
     8461 gttttcacta atgactttgc ggccttgatg tctgacacgc cagatgcgcc agaaagcaac
     8521 gatcctttga tgcgttgcca gagcgcgcgc ggtaccagcc gggtgatctg cttttcaccg
     8581 gatcacagta aaacgttgcc agaactgagc gttgcggcat tgacggaaat cgtcaaaacc
     8641 tggcaggagc aaaccgcaga gctgggaaaa acgtacccgt gggtgcaggt ctttgaaaac
     8701 aaaggtgcgg cgatgggctg ctctaacccg catccgcacg gacagatttg ggcaaatagc
     8761 ttcctgccta acgaagctga gcgcgaagac cgcctgcaaa aagaatattt tgccgaacag
     8821 aaatcaccaa tgctggtgga ttatgttcag cgcgagctgg cagacggtag ccgtaccgtt
     8881 gtcgaaaccg aacactggtt agccgttgtg ccttactggg ctgcctggcc gttcgaaacg
     8941 ctactgctgc ccaaagccca cgttttgcgg atcaccgatt tgaccgacgc ccagcgcagc
     9001 gatttggcgc tggcgttgaa aaagctgacc agtcgttatg acaacctctt ccagtgctcc
     9061 ttcccctact ctatgggctg gcacggcgca ccatttaatg gcgaagagaa tcaacactgg
     9121 cagctgcacg cgcactttta tccgcctctg ctgcgctccg ccaccgtacg taaatttatg
     9181 gttggttatg aaatgctggc agagacccag cgagacctga ccgcagaaca ggcagcagag
     9241 cgtttgcgcg cagtcagcga tatccatttt cgcgaatccg gagtgtaaga aatgagtctg
     9301 aaagaaaaaa cacaatctct gtttgccaac gcatttggct accctgccac tcacaccatt
     9361 caggcgcctg gccgcgtgaa tttgattggt gaacacacgg actacaacga cggtttcgtt
     9421 ctgccctgcg cgattgatta tcaaaccgtg atcagctgtg caccacgcga tgaccgtaaa
     9481 gttcgcgtga tggcagccga ttatgaaaat cagctcgacg agttttccct caatgcgccc
     9541 attgtcgcgc atgaaaacta tcaatgggcg aactacgttc gtggcgtggt gaaacatctg
     9601 caactgcgta acaacagctt cggcggtgtg gacatggtga tcagcggcaa tgtgccgcag
     9661 ggtgccgggt taagttcttc cgcttcactg gaagtcgcgg tcggaaccgt attgcagcag
     9721 ctttatcatc tgccgctgga cggcgcacaa atcgcgctta acggtcagga agcagaaaac
     9781 cagtttgttg gctgtaactg cgggatcatg gatcagctaa tttccgcact cggcaagaaa
     9841 gatcatgcct tgctgattga ctgtcgttca ctggggacca aagcagtttc catgccgaaa
     9901 ggtgtggctg tcgtcatcat caacagtaac ttcaaacgta ccctggttgg cagcgaatac
     9961 aacacccgtc gtgaacagtg cgaaaccggt gcgcgtttct tccagcagcc agccctgcgc
    10021 gatgtcacca ttgaagagtt caacgctgtt gcacatgagc tggacccaat cgtggcgaaa
    10081 cgcgtgcggc atatcctgac tgaaaacgcc cgcaccgttg aagctgccag cgcgctggag
    10141 cagggcgacc tgaaacgtat gggcgagttg atggcggagt ctcatgcctc tatgcgcgat
    10201 gatttcgaaa tcaccgtgcc gcaaattgac actctggcag aaatcgtcaa agctgtgatt
    10261 ggcgacaaag gtggcgtacg catgaccggc ggcggatttg gcggctgtat cgtcgcgttg
    10321 atcccggaag agctggtgcc tgccgtacag caagctgtcg ctgaacaata tgaagcaaaa
    10381 acaggtatta aagagacttt ttacgtttgt aaaccatcac aaggagcagg acagtgctga
    10441 acgaaactcc cgcactggca cccgatggtc agccgtaccg actgttaact ttgcgtaaca
    10501 acgcagggat ggtagtcacg ctgatggact ggggtgcgac tttactttca gcccgtattc
    10561 cgctttccga tggcagcgtc cgcgaggcgc tgctcggctg tgccagcccg gaatgctatc
    10621 aggatcaggc cgcgtttctg ggggcctcta ttggtcgtta tgccaaccgc atcgccaata
    10681 gccgttatac ctttgacggt gaaaccgtga ccctttcgcc aagtcagggc gttaaccagc
    10741 tgcacggcgg cccggaaggg ttcgacaaac gtcgctggca gattgtgaac cagaacgatc
    10801 gtcaggtgct gtttgccctg agttcagatg atggcgatca gggcttcccg ggtaatctcg
    10861 gcgcaacggt gcaatatcgt ctgaccgacg ataaccgtat ctccattact tatcgcgcca
    10921 cagttgataa accttgcccg gtgaatatga ctaatcacgt ctatttcaat cttgacggcg
    10981 agcagtctga cgtgcgcaat cacaagttgc agattctggc ggacgaatat ctgccggttg
    11041 atgaaggcgg cattccgcac gacggcctga aatctgtcgc cggaacgtct tttgatttcc
    11101 gcagcgccaa aatcatcgcc agtgagtttc ttgccgacga cgatcagcgc aaagtgaaag
    11161 gttacgatca cgcattcttg ttacaggcca aaggcgatgg caagaaagtg gcggcgcatg
    11221 tctggtcagc agatgaaaaa ttgcagctga aggtctacac caccgctccg gctctgcaat
    11281 tctactccgg caacttcctc ggcggcacac cgtcgcgggg aacagaacct tacgccgact
    11341 ggcaagggct ggcgttggaa agcgagtttc tgccggacag cccgaaccac cctgaatggc
    11401 cgcaaccgga ctgcttcctg cgtcctggcg aagagtattc cagcctgacg gaatatcagt
    11461 ttattgctga gtaatgttaa gccctcgtca tgagggcttt atctcatatt gctcaaatca
    11521 ccagcaaaca ccgacatatt tgcaactcaa tattcacaac aaccttacac tgcgccacta
    11581 ttttcgctat ggttatgcgt aagcattgct gttgcttcgt cgcggcaata taatgagaat
    11641 tattatcatt aaaagatgat ttgaggagta agtatatggc tgtaactaag ctggttctgg
    11701 ttcgtcatgg cgaaagtcag tggaacaaag aaaaccgttt caccggttgg tacgacgtgg
    11761 atctgtctga gaaaggcgta agcgaagcaa aagcagcagg taagctgctg aaagaggaag
    11821 gttacagctt tgactttgct tacacttctg tgctgaaacg cgctatccat accctgtgga
    11881 atgtgctgga cgaactggat caggcatggc tgcccgttga gaaatcctgg aaactgaacg
    11941 aacgtcacta cggtgcgttg cagggtctga acaaagcgga aactgctgaa aagtatggcg
    12001 acgagcaggt gaaacagtgg cgtcgtggtt ttgcagtgac tccgccggaa ctgactaaag
    12061 atgatgagcg ttatccgggt cacgatccgc gttacgcgaa actgagcgag aaagaactgc
    12121 cgctgacgga aagcctggcg ctgaccattg accgcgtgat cccttactgg aatgaaacta
    12181 ttctaccgcg tatgaagagc ggtgagcgcg taatcatcgc cgcacacggt aactccctgc
    12241 gtgcgctggt gaaatatctt gataacatga gcgaagaaga gattcttgag ctgaatatcc
    12301 cgactggcgt gccgctggtg tatgagttcg acgagaattt caaaccgctg aaacgctatt
    12361 atctgggtaa tgctgacgag atcgcagcga aagcagcggc ggttgcaaac cagggtaaag
    12421 cgaagtaaac gtcattcgtt taaaatgaga aagccgactg caagtgagtc ggcttttttg
    12481 ttgctaacaa tggagcacat tgcctgatgc gacgcttcgc gacttatcag gcctgtggtg
    12541 attcatcgga tacgccactc tgacggcgca tccgacaatt aaaccttacc cgcgacgcgc
    12601 ttttactgca ttcgccagtt gacgtaacag agcatcggta tcttcccagc cgatgcaggc
    12661 atcggtgatg ctcttaccgt aggccagcgg ctccccgctc tcgaggctct gattgccttc
    12721 caccagatgg ctttccacca tcacgccaat aatggccttt tcgccaccgg caatctgctg
    12781 gcaaacgtca gcacaaacat ccatctgctt tttgaattgt ttggacgagt tagcatggct
    12841 gaaatcgatc atcacctgtg ctggcaggcc tgctttgttc agcccttctt tcacttcagc
    12901 aacgtgcttc gcgctgtagt taggctcttt accgccgcgc agaatgatat ggcaatcgcc
    12961 gttaccgctg gtattcacaa tcgccgaatg cccccatttc gttacggaca ggaagcagtg
    13021 cggcgcaccg gcggcattaa tggcatcgat agccacttta atcgtaccgt cggtgccatt
    13081 tttgaagccg actggacaag aaagccctga tgccagttcg cggtgcacct gcgattcggt
    13141 ggtacgtgcg ccaattgcgc cccagctcat caggtcagcg agatattgtg gggtgatcat
    13201 atcgagaaac tcacccgccg ctggcagacc gctgtcgtta atatcaagca gcaatttacg
    13261 ggctatacga agaccgtcgt tgatctggaa gctgttatcc atatgcggat cgttaatcag
    13321 ccctttccag cccaccgtgg tacgcggctt ttcaaaatag acgcgcatta cgatttccag
    13381 ctcatctttc agctcttcac gcagcgccag caagcgagtg gcatactctt tagccgcgac
    13441 aggatcatga attgagcacg ggccaatcac caccaacagg cgatcatcat tacctttcag
    13501 gatcttatgg atcgcttttc gggcatgggc aaccgtattc gcggcatttt cagtagcggg
    13561 gaatttttcc agcaatgcga caggaggaag taactctttg atttctttga tgcgtaaatc
    13621 gtcgttctga taattcatgt ctgttccagt gttgccatac ttatcttagt gaatgcaata
    13681 cttccaatct atatcttccg tcagaatgtg taaacggggt tttacattat gaacggatta
    13741 atcctggaat tagcaagaaa aacgccagat tgtcgcgaaa aacgagatct ctcctacaat
    13801 ttctaactgt aactcctttg tttgttaatt atttcaagat tctctgctgc gtttcataaa
    13861 ctggctgaaa tcttaaacca atgccttata ttcacctgca aatgcactgt tggaagaggt
    13921 tatccgacat aacgaccata acaggagcat cctatgaaaa tgacaaaact ggccacatta
    13981 tttctgactg ccactctaag ccttgccagc ggtgccgcac tggctgccga tagcggagcg
    14041 caaactaata acggccaggc aaacgccgca actgatgcgg gccaggtagc ccctgacgcc
    14101 cgtgaaaatg tcgcgccaaa taacgtcgac aataacgggg taaataccgg ttctggcggc
    14161 acaatgctgc attcggatgg ttcttcaatg aacaatgacg gaatgaccaa agatgaagag
    14221 cacaagaaca ccatgtgcaa agatggtcga tgtccggata tcaataaaaa ggtacaaacc
    14281 ggtgatggca tcaataatga tgtcgatacc aaaaccgacg gtaccacgca gtaaccctgc
    14341 aaaatagcca ataatgggag agcggagtct ctccctttta atttttcact tctaaaagca
    14401 gtatgatgtc ataaagttaa gtgagaataa ttaagggatg actcgtcatg gcgcactcac
    14461 actcacacac gtcctcacac ctgccagaag ataataatgc tcgtcgcttg ttgtatgctt
    14521 tcggcgtgac tgccgggttt atgctggtag aagtcgttgg tggttttctt tctggttctc
    14581 tggcattgct ggccgatgcg ggtcatatgt tgaccgatac tgccgccctg cttttcgccc
    14641 tactcgccgt gcaattttca cgtcgtcctc ccaccattcg ccacactttc ggttggctaa
    14701 gactgaccac gctcgcggcg tttgtgaatg ccatcgccct cgtggtaatt accattttga
    14761 ttgtctggga ggcgatagaa cgcttccgca cgccgcgtcc ggtcgagggc ggcatgatga
    14821 tggcaattgc cgtggctggg ttgctggcaa atatactttc tttctggtta cttcatcacg
    14881 gcagcgaaga gaaaaacctc aacgtacgag cagcggcatt gcatgtgctc ggggacctgt
    14941 tgggttcggt tggggctatt attgccgcgt tgattattat ctggaccggc tggacacctg
    15001 ctgaccccat tctctcgata gtggtgtcgc ttctggttct gcgtagcgcg tggcgactgt
    15061 tgaaagatag cgtgaatgaa ttacttgaag gtgcaccggt atcgctggat atcgctgaac
    15121 tgaagcgtcg tatgtgccgg gaaatcccgg aagtccgcaa tgtgcaccat gtacatgtat
    15181 ggatggtagg tgagaagccg gtgatgacgc tgcatgtgca ggtgatcccg ccacacgctc
    15241 acgatgcctt gttggatcag atccaacact acctgatgga tcactatcag attgagcacg
    15301 ccaccattca gatggaatat caaccttgtc atgggccaga ctgccacctg aatgaagggg
    15361 tgtctggcca ttcacatcat caccattaat gggacagcgc gcatgagcct ctttcacgtg
    15421 cgctgttgat ccacatccga ctgccgttga gcgcaataaa ggtcaggatg atgtactcca
    15481 gagacatggc gtaaacgccc tgaagtgcaa aaataacgac gctaatcacg ttaataatca
    15541 cccacaacag ccagttttcc acatacttac gcgtcatcag aagcattgcc acgatagata
    15601 acaccatcat gcatgaatcc cagaacggga aagcgtccgg ttgcagttca ggcatcacaa
    15661 cctgtaatcc taatgcttgc atgatcatga ctgccacgcg ggtcaaaaat gcaaacaccg
    15721 gattgataaa taccgtcatc agaccaatcg aaacaacgca aaccgccaac cagctgagcg
    15781 ccttcggcaa tggtaaccag cgaattttca actccgcctc gttctgactg gtttgtcgcg
    15841 accacgcata ccaaccgtaa atattcgcgg caaagaaaaa cacctgtaat agcaggctgg
    15901 catacagctg aatctgaaag aaaataatgc caaacaaggt gacgttgatc aggccaaaga
    15961 agtagttgct gatcttctcc agactggcaa ggccaataca cagcaacccg gcgatcgtgc
    16021 ctaccgcttc gatccatgag agatcataac cgcctgctcc tattggtata tgtaccagga
    16081 tattctgcac actaaaaaaa tccatctttc ccccaaagcg taacgttacg ccttattatt
    16141 cgttatccac gtagtgtagc cgcaaaatcc agcatacgat tgagcggcac cagcgccctc
    16201 tctcgcagcc tttcatcaac atgaacctcg tgattgcttc cttcctgttc taatgcctct
    16261 gcgatggcct gaaggccatt catggccatc cacggacaat gcgcgcagct gcggcaggtt
    16321 gcaccctcac ctgcggttgg tgcttccagt aactctttat ctggcaccgc ctgctgcatt
    16381 ttgtagaaaa taccccgatc ggttgccaca ataagcctct gatgtggcaa tgttttcgca
    16441 gcagcgatca gttgactggt ggaaccgacc gcatccgcca tatcgacaat agcttgtggt
    16501 gattctggat gcaccagtat ggcagcatcc gggtattctt cttgcaagcg ggttaacgcc
    16561 tgagtcttaa attcatcatg cacaatacag gcaccctgcc agcatagaat gtctccaccc
    16621 gtctgttttt gcacgtaacg ccccagatgt ttgtcgggtg cccagatgat tttttcaccc
    16681 aaactatcaa gatgatcaat aagttcgacg gcaatgcttg aagttaccac ccaatctgcg
    16741 cgcgctttta ccgcagcaga agtgttggcg tagacgacga cagtacgatc gggatgggca
    16801 tcgcaaaatg cgttaaattc ttcaacaggg cagccgagat ccagtgaaca ttcagcctga
    16861 agtgtcggca tcagaattgt tttttccgga ctgagaattt tggcggtttc tcccataaat
    16921 ctcaccccag cgactaacaa agtagaagcg ggatgctttg caccgaagcg cgccatttcc
    16981 agagaatcag aaatacagcc accggtttct tctgccagtt gttgaatttc gggatcggta
    17041 tagtagtggg caaccatcac cgcattacgt tcttttagca gacgttttat cttctcgcgg
    17101 taatacgctt tttcatcaat gcttaacggc gtcggcttcg gggggaaagg ataaatcgcc
    17161 gtgtctggat caaacattac gctcatctta ccatctcgtt ttacaggctt aacgttaaaa
    17221 ccgacattag cgtaatattc gctgttatcg gtgtaatttg ttttatatgc taaacaagat
    17281 agtcgaatgg tggggaaaag tcactcgaat tacgcctaat tccaccgacg tagagttgct
    17341 tgcacagtaa gctctgacga tgtcatcagg tttacaaagt gaaattgagg atgcctgaat
    17401 agcaaaaaag cgcctttagg gcgctttttt acattggtgg gtcgtgcagg attcgaacct
    17461 gcgaccaatt gattaaaagt caactgctct accaactgag ctaacgaccc atacgggtgt
    17521 tacctgaaag atttctactc ggggccaatc tttaagattg gtgtgtcgtg caggatgact
    17581 cgcttcgctt gccctacggg ccgttgctgg cgcaacgtta tccttcacgc ttaacatctg
    17641 agtttgatgt taaaattggt gggtcgtgca ggattcgaac ctgcgaccaa ttgattaaaa
    17701 gtcaactgct ctaccaactg agctaacgac ccgagtggtg ggtgatgacg ggatcgaacc
    17761 gccgaccccc tccttgtaag ggaggtgctc tcccagctga gctaatcacc cgataatgcg
    17821 ctggatacta caaactactt ccaccgaacc catcgtaatt agtggtgggt cgtgcaggat
    17881 tcgaacctgc gaccaattga ttaaaagtca actgctctac cgactgagct aacgacccgg
    17941 tggtgggtga tgacgggatc gaaccgccga ccccctcctt gtaagggagg tgctctccca
    18001 gctgagccaa tcacccaata ctacgctgga tactacaact aactatgtta gtggtgggtc
    18061 gtgcaggatt cgaacctgcg accaattgat taaaagtcaa ctgctctacc aactgagcta
    18121 acgacccact ttttcgttgc tttcggtttg tttgatatcc cgtggcaacg gcggcatata
    18181 ttactgattt cagacttgag cgcaacaaaa atttcgatgc agatcactca actgcttatg
    18241 attcgcacga cacgaccaga aataatgcaa cttctggtcg tgtgttatgc attacatcgc
    18301 gttcagacgt ttttgtgcct gtttagcgcc atcagtacca gggtatttac tgataacctg
    18361 ctggtatacg gctttcgctt ttgcggtgtc acctttgtcc tgcatgatga cgccgacttt
    18421 aaacatcgca tcagcagcct ttggtgactt cggatagttt ttcactaccg aagcaaaata
    18481 gtacgccgca tcatcttttt tacccttgtt gtagtttaac tgacccagcc aataattggc
    18541 gtttggcagg taagttgaat cagggtaatt tttgatgaaa ttctgaaatg ccaccattgc
    18601 gtcatcctgg cgggatttat cctgcaccag cgcaatagct gcattgtaat ccgtgtttgc
    18661 atcgccgctt ttcaccggcg cgccagcatt cgcagtacca gcatcagctg tcggcgtcgt
    18721 tgatgccgcc gcaccgcttt gatcgctgct ggttgattgc gccgctgcac caccgctgct
    18781 gaggctgtcg atctgcaaca ggatctgctt ttgccgctcc acgacctgat tcagttgata
    18841 ctgattttcc tgaatctgac cacgcaggga atcaatatcg gattgattat cagaaagttg
    18901 ttgctggagt tgggttaaaa gctggctgtg agcattagaa atacgctcaa gttgagtgac
    18961 gcggtcttcg accgagcctg agccgacact actgattggt gcctgagcaa aagcggccca
    19021 gggggccgct ataccaacca gtaacgacag actcaatagt tgatgtctga agttactgct
    19081 catgcaattc tcttagtaaa ccagtaccgc acgacggttt ttggagtatg ccgcttcgtc
    19141 atgacccagt actgcaggtt tttctttacc gtaagaaacg atggagatct ggtctgcaga
    19201 aacgccttta ccctgcaggt acatcttaac ggcgttcgca cgacgttcac ccagggagat
    19261 gttgtattcc ggagtaccac gttcgtccgc gtgaccttcc acggtgactt tgtaagacgg
    19321 gttgctacgc aggaagtttg catgtgcatc cagcatttga gcgaagtcag aacggatatc
    19381 gtacttgtcc agatcgaagt aaacgatgtt gttctgctgc agctgttgca tttgcagacg
    19441 agcctgctct tcggaagaca tgttgccgtt gccgccgttc gcatccatac cagtgccggc
    19501 acccagcatg ccttcgctgc cgtcattgct ggcgttcttg ttggaagaac atgccgcaat
    19561 tgccataaca ggcagagcaa tcatcagccc tttcagcact ttgttcagtt gcatttcaat
    19621 gattccttta ctattcaatt aattattatc acagatacgg cgaccaggca gggaatttga
    19681 cctgtccatc agttgccgga agacgcgctt tgaaacgccc atctgtagaa accaaattca
    19741 gcacggatcc catcccctga gaagagctgt agattaccat agtgccatta ggtgccagac
    19801 ttggcgtttc atccaggaac gtggacgaca gaacttgtac gcctcccgtt gccagatctt
    19861 gtttggcaat gtgctgctgc ccaccattgg agctgaccat taccataaat ttaccgtcgc
    19921 tgctgacatc cgcatcctgg ttctgcgaac cttcccaggt aatacgttgt ggcgcaccgc
    19981 cgttgatatt cactttataa acctgcggac gaccggcctg gtcagaagta aatgccaggt
    20041 tctggctatc cgggaaccag gtcggttcgg tattgttact gcgaccatca gtcacctggc
    20101 ggatctgacc agaagccaaa tccattacgt acaggttcag actaccggtt ttcgacaagg
    20161 cgaatgccag tttgctgccg tctggcgaga atgcaggtgc accgttgtga cgcgggaatg
    20221 aagccacctg acgtacagcg ccatttgcca gcgtctgaat aaccagcgcg gaacgaccgc
    20281 tttcgaaggt cacataagcc agtttagaac cgtctggtga ccacgccgga gacatcagcg
    20341 gctgcggtga acggtgaacg acaaactggt tgtaaccgtc atagtcagat acgcgcagtt
    20401 catacgggaa ctgaccgccg ttggtctgaa caacgtaggc aatacgggta cggaacgcac
    20461 ctttaatgcc ggtcagtttt tcaaacactt catcactggc ggtatgacca gcataacgca
    20521 gccactgctt gttcactttg tacgagttct gagcaagtac agtacccggt gcgccgccag
    20581 tgtcaacaag ttgataagca acattgtaag aaccatccgg attcggagtg acctgaccga
    20641 caactacagc gtcaatgccc agtgcggacc atgcagatgg ttgtacttcc tgcgcactac
    20701 ccggctgctg tggcagacga gcgcgatcta acggattaaa tttaccgctg ttacgcaagt
    20761 cagcagcaac gatgccgcca atatcttcag gtgccgcacc aggccccgcc cactggaaag
    20821 gaacaacacc aataggacga ccggaatcta caccgctgtc gatcacaatg cggacttcag
    20881 catgcagaac tgatgcccac agtatgagaa aaccaaatgc tactcgtaat gcctgcttca
    20941 tcatatctcc cttatctgga ccgatggccc acgataattt agcagaatgt taacaaacta
    21001 aaatacacaa aactaccaga accccgtggc aaccggtgcc tgatgttgac cgtccgaaca
    21061 gtcaacatcg cgattacggt ttgaagtcca atggcgcgtt tttgaacact tcatatactg
    21121 cctggcttgg tggtttcggg atcttcgcaa gtttagctgc tgccaacgca gcctgacaaa
    21181 gtgcgggatc gccaccttca ggtttgatat ccagtaacat accatcgggt gccagtttta
    21241 tgcgcagcgt acaggttttg cctgcatagg acgatgcgtc atagaactta ctttcgatag
    21301 cagatttaat ctgcccggca tagttattga tatcggcccc tgatgcgcca ttgtttttag
    21361 aattaccact cccggcaggc gaagcattgt tccctttcgc ccctcccccc gttttcggtg
    21421 cattcttacc agagcttagc tcaccgaaaa tatcatctgc ctctgcggcg gctttttctg
    21481 ccgctgcttt cttatcagct gctgcctttt cagcagccgc tttttctgct gcttttttgt
    21541 cggctgcagc tttcttatca gctgcagcct tttcagcagc cgctttcttc tcagcttctg
    21601 ctttggcttt ttcagcagct tcagttgccg ctttctttct tgcttcagct gcagctgctt
    21661 ctgccgcttc cgctttcttc ttcagtgccg cagcggctgc ctcggctttt ttctgcgctg
    21721 cggctttggc ggcttctgct tctgcttttt tctttgcgtc tgcagccgct ttcttcgctg
    21781 cttcttccgc agctttagca tctgcttcgg ccttcgcttt agcatctgcc gccgctttcg
    21841 ctgccgcctc ttcagcttgc ttctgcttta actcggcctg ttttgcggct tcttcagcct
    21901 gctttttctg ctcctgagcc gctaaccgct ctttctcaag ttgcttcagg cgttcctgtt
    21961 cagccgcttg tttctcacgc agttcttcag cagcctgctg ttccttcatc ttgcgctgtt
    22021 catcagaacg cttcgcgctt gattcctggc tttgcatgcg tttgtactgc tcaactaccg
    22081 cacctgaatc aaccatgaca gcgtcgatgg acgaaccacc gccgcctccg gctgaagctt
    22141 ctatattctc atcgaacgaa ctccagatca gcgccgcaaa taagatgaca tgcagcactg
    22201 ctgaaataat tatcgcccgc ttgagcttgt cgttttgttc ggttgccttt gacactctcg
    22261 gtttccaaaa actgttcgcc tgttacccgc tctctttcaa gcaagggaaa cgcagatgtt
    22321 tagataggct gcgtcattaa accaaccgat ttcacacccg cactatgtaa caagttcagt
    22381 gctttaatta tttcatcgta aggcacatct tttgcgccac cgatcagaaa gaccgttttc
    22441 gggttggcct tgaagcggct ggacacttcc gccaccacct gctctggtgg taaacgctcc
    22501 aggcgatctt tctcaaccac cacggtgtac tgaccaatac cagacacttc aacaatcact
    22561 ggcggattat cgttactgct caccgcctgt gattcagtag cgtctggcag atcgacctcc
    22621 acgctctggg tgatgatggg cgctgtcgcc atgaagatca gcaacagcac cagcagtacg
    22681 tccagcaacg gtacaatgtt gatttcggac ttaagttcgc gacgacctcg tccacgcgct
    22741 ctggccatga cttacccctt attgctctcg ctaacggtaa acgcctggcg gtgcagaatc
    22801 gcggtaaact cttccataaa gttgtcgtaa ttcagttcca gtttgtttac gcgctggttg
    22861 aggcggttgt aggccataac tgccgggata gcggcaaaca gaccaattgc agtcgcaatc
    22921 aacgcttctg cgataccggg cgcaaccatt tgcagtgttg cttgttttac cgccccgagg
    22981 gcgataaagg catgcatgat cccccagacc gtaccaaaca gaccaatata cgggctgatg
    23041 gagccaaccg taccgaggaa cggaatgtgc gtttccagat tttcaagttc acggttcatg
    23101 gagatacgca tagcacgcga cgccccttcc actacggctt ccggcgcatg gctattggca
    23161 cgatgcaggc gcacaaactc tttgaacccg ctgtaaaata tttgttccga accagtcaga
    23221 ttatcccgtt tcccctgact ctcttgatag aggcgagaga gttcgattcc agaccagaat
    23281 ttatcttcaa acgcttcggc ttcgcgcgcc gctgcgttaa gaatacgggt ccgctggata
    23341 ataatggccc aggatgcgat tgaaaaacca atcaaaatca acatgataag tttaaccaga
    23401 aggctagcct tcaggaacaa atcaaggata ttcatgtcag tcactgctta aactccgcga
    23461 caatagactt gggaagcgca cgaggcttca ttttgagtgg gtcaacgcaa acaaccagaa
    23521 cctctgcttc attcagcaaa gtattctcgg cgttgacaat acgttgcgtg aaaaccaaag
    23581 aggtgccacg cattgatgtt atttcagtct gtatttcgag catatcgtcg agccgcgcag
    23641 gtgcgtaata ttccaccgtc attttacgta ccacaaaggc aacgcgttca gccatcagcg
    23701 cctgctgact gaagtgatga tgacgcagca tctctgtgcg tgctctttca taaaaagcga
    23761 cgtaactggc gtggtacacc acaccaccgg catcggtatc ttcatagtag acgcgagccg
    23821 gccatcgaaa cagcgttgta ttcactttac atcccggtaa tgcaacaaaa gttagagctt
    23881 ttaaacgctg ctactatacg cgcgcgattg aggtttggga atgagggcaa gttaagggag
    23941 cgtaaaaatt tatgggcctg gagcggccca taatttttta aagagaattc tgatttaaaa
    24001 gaagaagaaa atcagcccga taatgagaac aatatcggca agcaatgggc aaaaaatccc
    24061 ttgccaaaga accttctgcg gacgaaagcc cacgccgtga atcacaccag cacagacggc
    24121 ccacatcagc aataaaccat gccagatttc cagttcactg gtcttcgcgg caaaacgaga
    24181 tgggtcccaa aacatacatc ctgctaacag aagcgccatc acgaaggaaa gcgcccgcag
    24241 ggggcgcttg tccattaccg catacaaggt cgcgataatc ttactcatca gatgtcttct
    24301 tgaccggctt tgcctgattc gacgtgttca agcgccagcg cggtgattac cccaaacgaa
    24361 caggcaagaa gcgttcccag aatccatgcg aaataccaca tttttagctc cttacttagt
    24421 acagagagtg ggtgttacgt tcaatatctt ctttggtgat acgaccgaac attttccagt
    24481 aacaccaggc ggtgtagagc agaatgatcg gtaccagaac caccgcaacc caggtcatga
    24541 cgttaagcgt cagctggctg gaagttgcat cccacattgt cagacttgcg ttcatcatgg
    24601 tgctggacgg catcacaaac gggaacattg cgataccggc tgtcaggatg atgcaggcca
    24661 gcgtcaggga ggagaacaca aacgcccacg cggctttatc catacgtgca gtcaggatgg
    24721 tcagcagcgg cagaaccaca cccagtgccg gaatagccca cagaattggc gtgttgttga
    24781 agttaaccag ccatgcgcca gcttcacgaa ccacttcttt attcagtggg ttagaggctg
    24841 cgtaatggtc cattgtcgat ttcacgacat aaccatcgat accgtacatc acccatacgc
    24901 cagccagtgc gaaacagacc agtgtcacca gcgcagccac ctgagccgtt gcacgggtac
    24961 gcaggtgcag ttcgcccacg gtacgcattt gcagataggt tgcgccctga gtaatgatca
    25021 tccctacgct caccacgcct gccagcaggc cgaacgggtt aagcaactgg aagaagttac
    25081 cggtgtagta cagacgcaga tattcatcaa cgttgaacgg tacgccctgc aacaggttac
    25141 cgaacgcaac accaattacc agcggcggaa cgaagctacc aatgaagatg ccccagtccc
    25201 acatgttacg ccagcgggtt tcttcaatct tggagcggta gtcaaaaccg accggacgga
    25261 agaacaaaga cgccagcacg aggatcatcg ccacatagaa gccggagaac gcagcggcat
    25321 agaccatcgg ccaggcagca aagagtgcgc cgcccgcggt gatcagccaa acctggttac
    25381 cgtcccagtg tggtgcaatg gagttaatca taattcgacg ctcggtgtcg ttacgaccga
    25441 ggaaacgggt gagcatgccc acccccatgt cgaaaccgtc agtgactgca aaaccaatca
    25501 gcagaacgcc aaccagcagc caccagataa aacgcaatac ttcataatcg atcatttgac
    25561 gactcctgtc ttagcgtgcc ggctgagtag tcgtggaaga ctgctcaaag tgatagcgac
    25621 cggttttcag gctgcttggg ccgaggcgtg caaatttgaa cattaagaac aattctgcca
    25681 ccaggaacag ggtatacagg ccgcaaatca gcaccattga gaagatgaga tcgcctgcgg
    25741 tcagtgacga attcgccaca gctgtcggca gcacttcacc gatagcccac ggttggcggc
    25801 catattcagc cacgaaccag cccgcttcta cagcaatcca cggcagcgga ataccgtaca
    25861 gcgcggcgcg cagcagccat tttttctcgc caatgcggtt gcggatgaca ctccagaaag
    25921 agagcgcgat gattgccagc agcaggaagc cacacgccac cataatacgg aacgcgaagt
    25981 acagcggcgc tacacgcgga atggagtctt tagttgcctg ttgaatctgc gcttcagtcg
    26041 catcagccac gtttggcgta tagcgtttca gcagcagacc gtaaccgagg tctttcttca
    26101 tgctattgaa ctggtcacga accgcctggt cggtagaacc agaacgcagt tgttcgagca
    26161 gagagtacgc cttcatcccg ttacgaatgc gttcttcatg ctgcaccatc agctctttca
    26221 ggccgataac cggggtatcc acggaacgcg ttgcaatgat gcccagtgcg taagggatct
    26281 gaatcgcaaa tttgttcgtc tcctcttcct gatcaggaat gccgaacaga gtaaaggcag
    26341 caggcgcagg ttgcgtttcc cactcggctt caatagcagc cagtttggtt ttctgcacgt
    26401 cgcccatttc gtagccggat tcatcaccca gaacaataac agacagaaca gcagccatac
    26461 cgaagctggc agcgatagca aaggagcgtt tagcgaaggc gaagtcacga cctttcagca
    26521 tataccatgc gctgataccg aggatgaaca tcgcgccagt cacataacca gacgctacag
    26581 tgtgaacgaa tttcacctga gcaaccgggt taagcaccag ctcggagaag ctcaccatct
    26641 ccatacgcat agtttcaaag ttgaaatcgg acgcgattgg gttttgcatc cagccgttcg
    26701 caaccagaat ccacagtgcg gacaggtttg aaccgagcgc caccagccag gtgacacaca
    26761 tatgctgaac tttacccaga cgatcccaac cgaagaagaa cagacctaca aaggtggatt
    26821 cgaggaagaa ggccatcaga ccttcgattg ccagcggcgc accgaagata tcccctacat
    26881 agtgggaata gtaagaccag ttagtcccga actggaactc catggtcaga ccggtagcca
    26941 cacccagagc gaagttgata ccaaacaact tgccccagaa cttggtcata tctttataaa
    27001 tctgtttgcc ggagaggacg tagaccgttt ccataatggc cagcaggaac gccataccga
    27061 gcgtcagtgg cacaaaaagg aagtggtaca tcgcggtcaa ggcaaactgt aagcgcgaca
    27121 gttcgactat atctaacatc atgactcctt gctcatcgca tgaagactcc gagagtgaac
    27181 cccgttagaa agggtcacac gcatgcccca atagaaattt gtttgaacac tttcatcata
    27241 ccatgtgaat gcacacaaaa acggcgtaaa gaaaggttgc aaacatgtta ataaaaactc
    27301 aaattgatcc cacgtatata ttacgccgca aaatccttac aataaacagg tttttgttga
    27361 agcaaatttg catttttcga cggtgatcaa tttatagcta aattaccgcc tttcagccaa
    27421 tttgatcgag aacaatttat ctctttttga tgcccatttc caagacttat acattgataa
    27481 atatcaattc ctacaaatta tgttaatcat gtttcaataa ggtaacttta gtgacattta
    27541 tgtttaaaat gtgtgagtta taaggctgaa attagtttcg gttggcaatt aaagataaaa
    27601 agagacgaag caaaaacagc acggttgacc ttaattcttt ttttggtcac tggctaatac
    27661 gacgcagagt ttcaggatta ctaataaagg cataaatcca cccccgccga tattaacatt
    27721 taattaactt ataattatat tataattaac tcacccaggg ttattatttt gttaaaaata
    27781 aagccacata tacgtggctt gagagtgaag ataaacgcaa aattacctga tgcgctacgc
    27841 ttgccagtgt ctacatcatc tctgcaatat attgaatttg cctgcttttg tagaccgaat
    27901 aaagcgttca tgccgtatcc ggcatgaaca aagcgccctt tgtcaacaat ctggccgcgc
    27961 atatgtggct tcggtttgat tgctattcag gcaagccggt aactgaacgt ccgtgactgg
    28021 ccgggtaaaa aaggccccga tagatttgaa ccttgatttt cctcggtggt aatgtgttca
    28081 tccatcatcg tttctgagca agaaatcacc tcgcgactga aagcaacagt cgcatcacag
    28141 gttgctgatt cagccggatt aaacagccgt aaaatcactt cttgtcggtc ttcagctttc
    28201 ttaagtgcgc ttatcaggca tcccactggg ggcattttca acaaactata actttccggc
    28261 acgttgaatc cggctttgtt gagcttcatc gcatcccatg ggattttgtt gtaacactgt
    28321 actggagtca gccatgctcg cgcctgctga gctacaccag cggcggttgg cgtaccggta
    28381 taactcaata aacttaggcg acaagaaagc agaccacgta gttgtgagtc cgggactggc
    28441 attttaattc ccgaaggccg cccaggcctt aaaagcagat cttctttgcc cagtaagccc
    28501 acgccacgca gcaacgtaat ggcaaaggtt ttcttctctt caccgatgac ttcaaattca
    28561 cgtaaccctt cgctaaagac agccatgccg ttacgccctt cctgtaaggc aacatagttg
    28621 agcatattcc ataccggaac cggcgcttct ttccagcctt cttgctgcca gttgttcatt
    28681 gcactgtcgt tcacggggcg cgttagcgaa ccaaactgcg tatctgccag aacactgtcg
    28741 gtgttaaaag gtgtagggac caggacacga aggcgatgat cgtcagcctg gttatcaagg
    28801 ttgatatcca catcaatacg cctgctgtta tgactaagag tgacaaccaa caccacccct
    28861 actctgccag tggattgccg ggcgctgcgt tctgacaaat tgagcggcac tgccatgtca
    28921 tagcggataa cagccctgct ctgccaggct tcatgaataa tatcgcattg cggtttcgcg
    28981 ttcgctgcgg taattaccca ctcttctttt gcgggtgaat agtcatattc atcaccatca
    29041 tcagagcttt cttcaat
//
LOCUS       DAJVUK010000035        28214 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.035, whole genome shotgun sequence.
ACCESSION   DAJVUK010000035 DAJVUK010000000
VERSION     DAJVUK010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28214
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.035"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..846)
                     /locus_tag="OQQ57_001467"
     CDS             complement(<1..846)
                     /locus_tag="OQQ57_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE9 sensor domain-containing protein"
                     /protein_id="HCS1956279.1"
                     /translation="MVKKPQQGTIFAAAQRSDSYFVKCINMLSLYEKIKIRLIILFLL
                     AALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLK
                     NTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDES
                     GRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLRINGKDHDLLAVD
                     KIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDS
                     VDTEYI"
     gene            complement(946..1857)
                     /gene="gsiD"
                     /locus_tag="OQQ57_001468"
     CDS             complement(946..1857)
                     /gene="gsiD"
                     /locus_tag="OQQ57_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HCS1956280.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(1860..2780)
                     /gene="gsiC"
                     /locus_tag="OQQ57_001469"
     CDS             complement(1860..2780)
                     /gene="gsiC"
                     /locus_tag="OQQ57_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HCS1956281.1"
                     /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
                     AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
                     ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG
                     WLPTVGADSWQHYILSSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
                     EILLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            complement(2798..4336)
                     /gene="gsiB"
                     /locus_tag="OQQ57_001470"
     CDS             complement(2798..4336)
                     /gene="gsiB"
                     /locus_tag="OQQ57_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HCS1956282.1"
                     /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT
                     DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILVH
                     PATAMISPAALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
                     TWRPVADNNTRAAMLQTGEAQFAFPIPYEQAALLEKNKNIELMASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
                     RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
                     ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
                     ADLQ"
     gene            complement(4356..6227)
                     /gene="gsiA"
                     /locus_tag="OQQ57_001471"
     CDS             complement(4356..6227)
                     /gene="gsiA"
                     /locus_tag="OQQ57_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HCS1956283.1"
                     /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET
                     LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVR
                     GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM
                     SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG
                     AMKGLDYPRRFPLISLEHPAKQEPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT
                     REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS
                     PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLCVHGLLPGKDAAARVAWLLERV
                     GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD
                     LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA
                     VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
     gene            complement(6214..7179)
                     /gene="iaaA"
                     /locus_tag="OQQ57_001472"
     CDS             complement(6214..7179)
                     /gene="iaaA"
                     /locus_tag="OQQ57_001472"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HCS1956284.1"
                     /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
                     AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH
                     LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPAIFSTPLRYEQLLAARKEG
                     ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
                     YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
                     LIAIGHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
     gene            7383..8618
                     /gene="moeA"
                     /locus_tag="OQQ57_001473"
     CDS             7383..8618
                     /gene="moeA"
                     /locus_tag="OQQ57_001473"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HCS1956285.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV
                     VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            8618..9367
                     /gene="moeB"
                     /locus_tag="OQQ57_001474"
     CDS             8618..9367
                     /gene="moeB"
                     /locus_tag="OQQ57_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HCS1956286.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHNDATVGQPKVESARDALTRINPHIA
                     ITPVNALLDDAELAALIAEYDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(9443..10105)
                     /gene="fsa"
                     /locus_tag="OQQ57_001475"
     CDS             complement(9443..10105)
                     /gene="fsa"
                     /locus_tag="OQQ57_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HCS1956287.1"
                     /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP
                     QLHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKNPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRT
                     SI"
     gene            10236..11135
                     /locus_tag="OQQ57_001476"
     CDS             10236..11135
                     /locus_tag="OQQ57_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HCS1956288.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEIATALLQACHEAGIHTAVETC
                     LHVPWKYITPSLPYIDLFLADLKHIADAPFKQWTDGNAAKVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APDLLDFAQQYACQKGLTATLRG"
     gene            11141..13573
                     /locus_tag="OQQ57_001477"
     CDS             11141..13573
                     /locus_tag="OQQ57_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HCS1956289.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALAREMAATETRESRRDELLAIAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQTLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGNVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            13719..14534
                     /gene="ybiV"
                     /locus_tag="OQQ57_001478"
     CDS             13719..14534
                     /gene="ybiV"
                     /locus_tag="OQQ57_001478"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HCS1956290.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIAFDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            14686..15951
                     /locus_tag="OQQ57_001479"
     CDS             14686..15951
                     /locus_tag="OQQ57_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HCS1956291.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSTSRPEIYPIYWSQTQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
                     HEDYETNWEGRFTLADLNIHGKRALGMDV"
     gene            complement(16192..17784)
                     /locus_tag="OQQ57_001480"
     CDS             complement(16192..17784)
                     /locus_tag="OQQ57_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HCS1956292.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLMKTLVGDLQPDSGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            18003..18923
                     /gene="ldtB"
                     /locus_tag="OQQ57_001481"
     CDS             18003..18923
                     /gene="ldtB"
                     /locus_tag="OQQ57_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCS1956293.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
     gene            complement(18982..20100)
                     /locus_tag="OQQ57_001482"
     CDS             complement(18982..20100)
                     /locus_tag="OQQ57_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HCS1956294.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKVLQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLASLIA
                     LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN"
     gene            complement(20097..20564)
                     /gene="mntR"
                     /locus_tag="OQQ57_001483"
     CDS             complement(20097..20564)
                     /gene="mntR"
                     /locus_tag="OQQ57_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HCS1956295.1"
                     /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGTK"
     gene            20750..20878
                     /gene="mntS"
                     /locus_tag="OQQ57_001484"
     CDS             20750..20878
                     /gene="mntS"
                     /locus_tag="OQQ57_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HCS1956296.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLILLSMLCDMVNNKPQQDKPSDK"
     gene            21150..22733
                     /gene="opgE"
                     /locus_tag="OQQ57_001485"
     CDS             21150..22733
                     /gene="opgE"
                     /locus_tag="OQQ57_001485"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HCS1956297.1"
                     /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
                     AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
                     EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
                     LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
                     YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
                     GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
                     NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
                     TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
                     FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF
                     QLQKVDYNHLGTDIFDPKP"
     gene            complement(22782..23297)
                     /gene="ompX"
                     /locus_tag="OQQ57_001486"
     CDS             complement(22782..23297)
                     /gene="ompX"
                     /locus_tag="OQQ57_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HCS1956298.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(23350..23415)
                     /locus_tag="OQQ57_001487"
     CDS             complement(23350..23415)
                     /locus_tag="OQQ57_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956299.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            23650..24537
                     /gene="rhtA"
                     /locus_tag="OQQ57_001488"
     CDS             23650..24537
                     /gene="rhtA"
                     /locus_tag="OQQ57_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HCS1956300.1"
                     /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
                     AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
                     MGSTLTVRKESKIKELDIN"
     gene            24836..25339
                     /gene="dps"
                     /locus_tag="OQQ57_001489"
                     /gene_synonym="pexB"
     CDS             24836..25339
                     /gene="dps"
                     /locus_tag="OQQ57_001489"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HCS1956301.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            25743..26489
                     /gene="glnH"
                     /locus_tag="OQQ57_001490"
     CDS             25743..26489
                     /gene="glnH"
                     /locus_tag="OQQ57_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HCS1956302.1"
                     /translation="MKSVLKVSLAALTLVFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            26628..27287
                     /gene="glnP"
                     /locus_tag="OQQ57_001491"
     CDS             26628..27287
                     /gene="glnP"
                     /locus_tag="OQQ57_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HCS1956303.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            27284..28006
                     /gene="glnQ"
                     /locus_tag="OQQ57_001492"
     CDS             27284..28006
                     /gene="glnQ"
                     /locus_tag="OQQ57_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000569103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HCS1956304.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     NPQVLIKNPPSQRLQEFLQHVS"
BASE COUNT         6978 a         7538 c         6970 g         6728 t
ORIGIN      
        1 aatatactcc gtatcgacag aatcaataat attataatta ccttcgctat tataaataat
       61 cagtttttca cgagcgagtt gattcttggc aatgatctca tgaccttgtt tcaaaaatag
      121 aacttcatca ttagcgctga tttgatcaag atactcgttc aaataccgcc agtttaaatc
      181 gacatgaatt ttatctaccg ctaacaaatc gtgatctttg ccgttgatac gtagcgtaaa
      241 agagatacat tttttacccg gacgatcaaa gcaattgtat gccggattcc agctgttgtt
      301 agagtcatct gaagccaccg accacggtcg tttcgatggg ttaaaatcgg caaaaataac
      361 ccgccctgac tcgtcgacaa gcggtccatt tacttgttcc tgatgataaa caacgatttt
      421 atcattcgcc ctccgtgaaa agagataata tttattatca tcaagtacca gtcccaccga
      481 gtctaaaaat ggcatcattt ccattttcag aatcacggcg cgttgaatct cctctgtatt
      541 ttttaataaa tacagtgagt cctttaatgt cagggccgaa cgttcaatat ctttaaagaa
      601 atagccaacg tttttctgaa taagttcaaa gcggctatcg gcacgtttta ccgcgcgttc
      661 cgataccagt tgatagttaa tgatgaaaaa aagaccaata aatgacagtg ctgccaataa
      721 aaataaaatt atcagcctta tctttatctt ttcgtataaa ctcagcatgt taatacattt
      781 aacaaaataa ctatctgaac gctgtgccgc tgcaaaaata gtcccttgct gcggcttttt
      841 aaccaaatta cccgattcta caaaatcagc agaaagttac aacacttgct tagggcaata
      901 atttcctgtg aggtgattac cctttcaagc aatattcaaa cgtaactatc ctttaatttt
      961 cggatccagc gcatcgcgta aaccatcgcc caacaaattg aacgccagta cggtcagaaa
     1021 aatagccagg gccggaaaaa cagcgacatg cggcgcgata accatatccg ctcgtgcctc
     1081 attgagcatt gctccccact ctggtgtcgg cggctgcgca ccgaggccga gaaatgacag
     1141 gctggcggca gagataatcg aggtgccaat gcgcatggtg aaaaacacca cgatagacga
     1201 gacggtccca ggcaagatat gacgcaataa aatggtcata tcgctggcac caatactgcg
     1261 tgctgactca ataaaggttt gctgtttcaa caccagcgtg ttgccgcgca ccagtcgggc
     1321 aaacgcgggg atggaaaaaa tggcgactgc gataatcacg ttagcaatgc cgcttcccaa
     1381 caccgcaaca acagcgatcg ccagtaaaat acccgggaag gcaaacagca catcgcaaat
     1441 gcgcatgatc agccgatccc accagccttc ataatatcca gccaacaagc ccagcaacgt
     1501 cccgatcgcc gcaccgataa acacggcaaa cacgcccgcc gccagcgaga tttgcgcacc
     1561 aaccaggaca cggctgaaaa tgtcgcgccc cagtgaatcg acgccaaacc agtgctgcaa
     1621 agaaggtccg ttattcagat tgtcataatc aaaataattt tcggcgtcat agggagcgat
     1681 ccagcgtgca aaaatggcca ccacaatcaa taaaataacg aataatgcgg cggtcatcgc
     1741 catatgctga cggcgaaatc gtcgccagaa ttcatgccac ggtgtacgca cctggtcagg
     1801 tttgaccagt ggcatggcgt ttaacaccgc ctgacgtcgc cagttaaata gtcgcatcct
     1861 tacttgtacc tgatagccgg gttaatggcg gcgtaaagca catccaccac taagttgata
     1921 agaataaatt ccagcgagaa aagcagaatt tccgcctgaa tcaccgggta atcgcgcatt
     1981 tctacggagt caacgagtaa gcgtccaagt ccgggccagt tgaaaacttt ctccaccacg
     2041 atagaaccac cgagcaaaaa gccaaactgt aagcccatca tggtcactac cgggatcatc
     2101 gcgttacgta gcccgtgttt gaggacaacc caggtttcgc tcaccccttt cgccctcgcg
     2161 gtacgcatat aatcttcgct taaaacatcg acaaacgacg cgcgggtaaa gcgcgccatc
     2221 acggctgcca ctgccgcgcc gagcgtcagg gaggataaaa tgtagtgctg ccaactgtct
     2281 gctcccacgg taggcagcca gcccagttca acggagaata cctgaattaa aagcatcccc
     2341 agcgcaaatg ccggaaacga gatccccgac accgcaatgg tcatactcaa tcgatccggc
     2401 caacgattac gccagacggc ggcgataatt cccgccgcca taccaaatat caccgcccag
     2461 accatactgg ttatggtcag ccacagcgtt ggcataaagc ggctggcaat ctcatcggca
     2521 accggacgac gcgacaccat cgacaggcca aaatccccct gcacagcatt gctgatatag
     2581 tgccagaact ggtgatacag cggctgatcc aaccccagct gctgacgcac cagttctata
     2641 acctgcgcat cagcttcggg cccggcaatc aatcgcgccg gatcgccggg cagcatatgc
     2701 acaaataaaa acaccagcac cgagacgata aacagcgtcg gaatcaaccc cagtaagcgt
     2761 ttgataacgt aattaagcat tccactccct gcgttgctta ttgcaaatcc gcgtcttcaa
     2821 agctgaagcc ggtgtctggc atgatccaaa aaccggtcag gtttttactg tgtgccgaca
     2881 ccagtttttc taccaccagc gggatccacg gcgactcttg ccagatgata tcctgcgccg
     2941 ccttatacaa gcgggtcttt tccgccggat cattagtttt cagtgcctga gccaggaagt
     3001 cgtccacctg tttattgctg taaaatgcgg tattaaacag cgtcggtggc cagttttgcg
     3061 aggcgaacag tggcgatagc gcccagtccg cttcgccggt tgaagccgac cagccagtgt
     3121 agaacatccg cacgccgctc tctttttgcc ctttaccttc aacttctgcc gcccgctgtc
     3181 cggcatccat cgcggtcacc tgggctttaa tcccgacctg cgctaactgc tgctgggtaa
     3241 attgcagcac tttctgcgcg gtgctgtggt tatgtgacga ccacagcgtg gtactgaaac
     3301 cgttgggata tcccgcctct ttcagtaatt cgcgcgcttt cactggatcg taaggccacg
     3361 gtttataact ttgcgcgtag gcgatacttg gcggtaccac accagtagct ggcgttgcat
     3421 agcccgcaaa ggcaactttc accagcgccg gacggttaat ggcgtaattc agcgcctcac
     3481 ggaccttcgg gttatcgaac ggcttttgcg tcacgttcat actgatataa cgctgcataa
     3541 ttgacggact ggccatcaac tcgatatttt tgtttttctc cagcagtgcg gcctgctcgt
     3601 agggaatggg gaaagcaaac tgcgcttcac cggtttgcag cattgccgcg cgggtgttgt
     3661 tatccgccac cggacgccag gttatgctgt ccagtttggg caatcctggc tgccagtaac
     3721 ccgcgaattt tttcaccttc acaaaatcgg tctgattcca ggtatccagt tcatacggtc
     3781 cggttcccac cggatgaaaa ccaatctcct tgccatattt ttccagcgct gccggtgaaa
     3841 tcatcgcggt cgccggatgg acaagaatat taataaacgc tgagaacggc tgtttgaggg
     3901 taatctttac cgttgtcgga tcgatcgcct ccgttttggc aatattctta tacaggttat
     3961 agcgtttaag atgattcgcc ggatcgctgg cccggtccag attcgctttc accgccgcgg
     4021 cgttgaaatc ggtgccatcc tggaatttaa ttccttcccg caatttcacg gtgtaagtaa
     4081 tgccgtcatc ggaaacggta taactctccg ccagcacgtt tttcagtttc atctctttat
     4141 ccagaccgaa cagcccctgg taaaacgatt tcgctacggc ctgagataac gtgtcattcg
     4201 cgtcatacgg atcgagcgtg gtgaaattcg atcctaccgc caccaccaca tctttggcag
     4261 cgaatgcaca agatgccatc aacgctgtcg caatgcccag cgccactaac ccactacggt
     4321 gtacagctct tgccatttta ttctccgcct gaatgttatc tacgcatgaa tgcgtattct
     4381 gattgtggtt gtgcgacgta atgccccggc ccgacgcatt gcaacgagac ggctgccacc
     4441 tcttcgccac gcagatgaat attgctggga agatcgtccg acagcagtac acgctgcggt
     4501 cgttgtcggg acggttcagc gaccggaact gccgccagta atttacgcgt ataaggatgc
     4561 tgcgggtttt cgaagaccgc gcgccgtgga ccaatttcaa caatttgccc gagatacatc
     4621 accgccacac gatgactaat ccgctctacc acggccatat cgtgggagat aaacagatac
     4681 gcaatgccga aatcacgctg gagatcgagc aacaagttga taatctgccc gcgaatagaa
     4741 acatccagcg ccgaaacggc ttcgtcggca atgatcactt ttggattcaa tgccaacgcg
     4801 cgagcaatgc agatgcgctg gcgctgaccg ccggaaaact catgcgggta acgccaggca
     4861 tgttcaggta acaggcccac gcgctccagc aaccacgcaa cgcgtgcagc cgcgtcttta
     4921 cctggcaata aaccgtgtac acacagcggt tcgataatcg aatcaccgat ggtctgacgt
     4981 gggtccagcg aagcgtaagg gtcctgaaaa ataaactgaa tatcccggcg caatgcctga
     5041 agtttgccag gtgacaaggt atcgattcgc tgaccgttaa agataatttc gccgccctgc
     5101 gattcgacca ggcgcagcaa cgcccgcccg gtagtggatt taccgctgcc agactcgccc
     5161 accagcgata gcgtttcgcc aggccagaga tcaaaactga ctttctcaac ggcatgcact
     5221 tcccgcgtta cgcgattcaa caaaccgctg cgcaaaggga aacgggtgac aagattacgc
     5281 actcgtaaaa caggttcgcc atccaccacc gttttctgct cgatgggggg ttcctgtttc
     5341 gctggatgtt caagcgatat caatgggaaa cgtcggggat aatctaaccc tttcatcgca
     5401 ccaagttgcg gaacagcagc taacagcgca cgggtgtaag gatgttgcgg tgcatgaaaa
     5461 atctgttcga cggtacccgt ttccaccgcc tcgccctgat acatcaccag tacccgatcg
     5521 gctatctctg ccaccacgcc catatcgtgc gtgataaaga taacacccat cgacatctct
     5581 ttttgcaata ctttgattaa ttgcaggatc tgcgcctgaa tagtgacatc cagcgcggtg
     5641 gttggctcat cggcaatcag caccgccggg cggcatgaca gcgccatcgc aatcatcact
     5701 cgctggcgca tcccgccaga gagttgatgc ggataacgtg aaagaatggt ttgtgcctca
     5761 ggaatgcgta cctgatccag catccgcttc gcctcgacca tcgcttcttc acgactggcg
     5821 ttctgatgca gacgaattga ttcggcaatc tgttcaccca cagtaaatac cgggttcagc
     5881 gatgtcatcg gctcctgaaa tatcatcgcc atatccgcac cgcgaacatg gcgcatttgt
     5941 gcagcgctct gctcgctaag ttcaatcact tcgcgactgc gccgctgcaa cagcatttta
     6001 tcgcactgta ctaaaccgcc cgcctgttcc aacaggcgca tcaatgccaa cgcagtcact
     6061 gacttaccgg agccggattc gccaacaatt gccagcgtct caccgcgttg cagactaaaa
     6121 gagagattgc ggaccgcagc tattttctgc tggtcctgca taaaggcaat attcagattt
     6181 tcaaccgcca gcacattacc ggcatcaagt tcatcactgt gtggcaacgg tgtccccttt
     6241 ttcacggtag ataccggtgg ttggcgtatc gcctgcgtag ccccaggcgc gatacattcc
     6301 ttcggtgtta aacggtagcg cgacattccc ttcatggccg atagcgatta agccaccgct
     6361 accgccaagc gcagggagtt tttccattac tacccgctcg caggcttccg cgagacttaa
     6421 tccgccgtaa tccattaacg cggcgatgtc atatgccgcc agcgcgcgga tgaagacttc
     6481 gcccgtgccg gtacaagaaa ccgccacact ggcgttattg gcgtagcatc cggcacccac
     6541 taagggacta tcgccaactc gtccgggtaa tttattggtc attccgcctg tggacgtggc
     6601 tgccgccaaa ttgccgtcta aatccaacgc cacggccccc acggtgccca ttttctgttt
     6661 ttcatccagt ggcgcaccgc tatggtcgag gacggttgcc ccttccttgc gcgctgccag
     6721 tagttgttca taacgcaaag gcgtggagaa aatcgccggc gagacgcgct ccatgccacg
     6781 agcaaacgca aaattttctg ccccttcgcc aatcatcatc acatgcgggc tttgctccat
     6841 caccagccgg gcggcaagaa ccggattacg cagatgacta acgcccgcca ccgcaccggc
     6901 tttcagggtg ttaccatcca tcacacaggc gtccagttca tgggtttcat cacgcgtaaa
     6961 gacagcgcca attccggcgt taaacagtgg acactcttcc agcagacgca ccgcttccgt
     7021 caccacatcc agcgcacttt cgcccgcttc cagcattttc tgcccggttt caacaatggc
     7081 agacaacgcc tcaatgtagc gtaattcctg ttgcagactc atctgcgcgc ggctaattgc
     7141 acctgcgcca ccatgaattg caatgactgc tttgcccata gtattcgtcc attaagggtg
     7201 gctcgccact tttgctataa atatcagaat ttttatgaat tactcattca atttttgaat
     7261 atagaaagat ggatatggca tgtaaaggca ggagccaacg ctacgcccga ggtggcatac
     7321 agtctgtggc gtttttctga cataataggc aaattcgatt ttgcctccgc aggagtgttt
     7381 tcatggaatt taccaccgga ttgatgtcgc tcgacaccgc gcttaatgag atgctttctc
     7441 gcgtcacccc actgaccgcc caggaaacgc tgccactggt acagtgtttt ggtcgtattc
     7501 tggcgagcga tgtcgtttcg ccgcttgatg ttccggggtt tgataactcc gcaatggacg
     7561 gctacgcggt gcgtttagcc gatattgcct ccgggcaacc gctgcccgtt gccggtaaat
     7621 cctttgccgg tcagccgtat catggtgaat ggcctgcggg cacctgcatt cgtattatga
     7681 ccggtgcgcc ggtgccggaa ggctgcgaag cggtggtgat gcaggagcag actgaacaaa
     7741 cggacaatgg cgtgcgtttt actgctgaag tgcgtagcgg gcaaaatatt cgccgtcgcg
     7801 gtgaagatat ctctgcaggt gcggttgttt tcccggcggg aactcgcctg actaccgcag
     7861 agctgccagt aattgcttca ctggggattg ccgaagttcc ggtgattcgt aaagtgcgtg
     7921 tagcgctttt ttctaccggt gatgaactcc agttgcccgg tcagccgctg ggtgacggcc
     7981 aaatctacga caccaaccgt ctcgccgtac acctgatgtt agaacagctg ggttgcgagg
     8041 taatcaactt agggattatc cgcgacgatc cccatgccct gcgcgccgca tttattgaag
     8101 ccgacagcca ggcggatgta gtgatcagtt ccggcggtgt ttcagtgggt gaagcggatt
     8161 acaccaaaac gattcttgaa gagctggggg agatcgcctt ctggaagctg gcgattaaac
     8221 caggtaaacc gttcgcgttc ggtaaactca gcaatagctg gttctgcggc ctgccgggca
     8281 acccggtttc agcgacgctg accttctatc aactggtaca gcctttgctg gcaaaactaa
     8341 gcggcaacac cgccagcggc ctgcccgcgc gccagcgcgt acgcacagcg tcccgcctga
     8401 aaaaaacgcc aggacgtctt gatttccagc gcggcgtgct gcaacgcaac gccgacggtg
     8461 aacttgaagt gacgaccacc ggacatcagg gttcacatat atttagctcc tttagtctcg
     8521 gcaactgctt tatcgtgctg gaacgcgatc gcggcaatgt ggacgtgggc gaatgggtgg
     8581 aagtagaacc gtttaacgcg ttgttcggag gcctgtaatg gcggaactca gcgatcagga
     8641 gatgctgcgc tacaaccggc aaatcattct gcgcggtttt gattttgacg gtcaggaggc
     8701 gctaaaagat tctcgtgtgc tgatcgtcgg cctcggtgga ctcggctgcg cagcttcgca
     8761 gtatctggca agcgccggtg tcggcaacct gacgctgctc gacttcgaca cggtttcgct
     8821 ctcgaatctg caacgccaga cactgcacaa tgatgccacg gtcgggcaac cgaaggtgga
     8881 atccgcccgt gacgccctga cgcggatcaa cccacatatc gcgattacgc cagtcaatgc
     8941 actgctagat gacgcagaac ttgcagcatt gattgctgaa tacgatctgg tgctcgactg
     9001 tacggataac gttgcggtac gtaatcaact gaacgcaggc tgttttgccg cgaaggtgcc
     9061 gctggtttcc ggcgcggcaa ttcgtatgga agggcaaatc acggtcttca cttatcagga
     9121 cggcgaaccg tgctatcgct gccttagccg tttgtttggc gagaacgcgt taacctgcgt
     9181 agaagcaggc gtgatggcac cgttgatcgg cgtaattggt tcgttgcagg caatggaagc
     9241 gatcaaactg ctggcaggtt atggcaaacc ggccagcggg aaaatcgtca tgtacgatgc
     9301 gatgacctgt cagtttcgcg aaatgaaact gatgcgtaat ccggggtgtg aggtgtgcgg
     9361 gcagtaattg ccacctccag gccagataag acgcggcact ccgccacgtc atcagcaatt
     9421 tatgaggatg cagaacgtcc ggttaaatcg acgttctgcc aaacgctccc agccagtcct
     9481 gttcaaactt cgccacagcg gcatcaaccg ccggatagct aatcatctgt tgtgccacat
     9541 ccagtggcag cgtaattgat tcacatcctg ccagtaagca gtccagcgcc tgacgcgggt
     9601 ttttgaaact cgctgccagc actttcgcct gcggcgcatg cattttcaat aactggtgta
     9661 agtcggtcac agtctgaatg ccgctaccgc cctgagcatc aatacgatta acgtaaggcg
     9721 caacatattc cgcacctgcc agcgccgaca gcagcccttg tgctgcgcca tataccgcgg
     9781 ttcccagcgt tggaatccct tccgctttta acatcttaat agctgccagc ccctcggcgg
     9841 tcaccggaac tttcaccacg atatccgcaa taatagaacg caatttacgt gcgtcattca
     9901 ccatcccttc agcagtggta gccattacct gggcaaacag acgcccctga ccgcccatcg
     9961 cttcatgaag ttgcggaagc acaacatcca gcggtttttt acccgcggcg ataatgcttg
    10021 ggttagtggt cacacccgcc agcggaaaaa tacgtgacag cgccttcact gcaacaacgt
    10081 ctgaagtatc cagatacagt tccataacca tcctcaaaat gtactttttg tctgaatgta
    10141 gactatcacg ggaaaactct ctgaacagtt gacgcacatc aatccaactt tcattcgaaa
    10201 gtattttaat gtttgaacga aacagagagg caactatgat tttcaatatt cagcgctact
    10261 cgacccatga tggccccggt atccgcacgg tcgtatttct taaaggctgt tcgctgggct
    10321 gccgctggtg tcagaacccg gaaagccgcg cccgcacgca ggatctgctg tatgacgcac
    10381 gactgtgtct ggaaggctgc gagctgtgcg ctaaggcagc gccggaagtg attgagcgcg
    10441 cattgaatgg tttgcttatt catcgggaaa agttaacccc ggagcatctg acggcgctaa
    10501 ccgactgctg cccgacacag gcgttaaccg tgtgtgggga agtgaaaagc gttgaggaga
    10561 tcatggcgac cgttctgcgc gataaaccgt tttacgatcg cagcggcggc ggcttaacgc
    10621 tttcgggtgg tgaacccttt atgcagccgg aaatagcgac ggcgctactg caagcctgcc
    10681 acgaggcagg cattcatact gcggtagaaa cctgtctgca tgtgccgtgg aaatatatca
    10741 ccccttctct gccctatatc gatctgtttc ttgccgattt aaaacacatt gccgacgcgc
    10801 cgtttaaaca gtggaccgac ggtaacgccg ccaaggtgct ggataacctg aaaaaactcg
    10861 ccgcagcggg caaaaaaatc attatccgcg tgccgctgat tcagggcttt aatgccgacg
    10921 aaacctctgt aaaagccatt accgattttg ccgccgacga gctgcacgtt ggcgaaattc
    10981 attttctgcc ctaccacacg ctgggcatca acaaatatca cttacttaat ctgccctatg
    11041 acgccccgga aaaaccgctt gatgcgccag acctgctcga ctttgcccag cagtatgcct
    11101 gccagaaagg gttaaccgcg accttacgag gataacaacc atgaccacac tgaaactgga
    11161 cacgctcagc gaccgcatta aagcgcacaa aaatgcgctg gtgcatattg tgaaaccgcc
    11221 ggtctgtacc gagcgcgcgc agcactatac cgagatgtat caacaacatc tcgataagcc
    11281 gatcccggta cgtcgcgcgc tggctctggc gcatcacctg gcgaatcgca ccatctggat
    11341 caagcacgat gagttgatca tcggcaacca ggcaagcgag gttcgcgctg cgccgatctt
    11401 cccggaatat accgtctcgt ggatcgaaaa agagattgat gatctggcag atcgtcccgg
    11461 tgctggtttt gcggtgagcg aagagaacaa acgcgttctg catgaagtgt gcccgtggtg
    11521 gcgcggtcag acggtacagg atcgctgcta cggcatgttt accgatgagc aaaaaggtct
    11581 gctggcgacc ggaatcatta aagcggaagg caatatgacc tccggcgatg cgcacctggc
    11641 ggtgaatttc ccgctgctgc tggaaaaagg tcttgatggt ctgcgcgaga aagtagcgga
    11701 acgtcgctcg cgcatcaatc tgacggtact ggaagatttg cacggcgaac agttcctgaa
    11761 agcgattgat atcgtgctgg tggcagtcag cgaacacatt gaacgttttg cagccctggc
    11821 gcgtgaaatg gccgcgaccg aaacccgcga aagccgtcgc gatgaactgc tggcgatagc
    11881 agaaaactgc gatcttatcg cccaccagcc gccgcagact ttctggcagg cgctgcaact
    11941 gtgttacttc atccagttga tattgcagat cgaatctaac ggtcactcgg tatcgtttgg
    12001 tcgtatggac cagtatctct acccgtacta tcgccgagac gttgaactca accagacact
    12061 ggatcgcgaa cacgccatcg aattgctgca tagctgctgg ctgaaactgc tggaagtgaa
    12121 caagatccgc tccggctcac actcaaaagc ctctgcggga agtcctctgt atcagaacgt
    12181 caccattggc ggacaaactc tggttgatgg tcaaccaatg gacgcggtga atccactctc
    12241 ttacgcgatc ctcgaatcct gcggtcgcct gcgttccact cagcctaacc tcagcgtgcg
    12301 ttaccatgca ggaatgagta atgatttcct cgacgcctgc gtacaggtga tccgttgcgg
    12361 cttcgggatg ccggcgttca acaacgacga aatcgtgatc ccggaattta ttaaactcgg
    12421 tattgaaccg caggacgctt acgactacgc agcgattggt tgtatcgaaa ccgccgtcgg
    12481 tggcaaatgg ggctatcgct gtaccggcat gagctttatc aacttcgccc gcgtgatgct
    12541 ggcggcgctg gaaggcgggc gtgatgccac aagcggcaac gtgttcctgc cacaagaaaa
    12601 agcgttgtcg gcaggcaact ttaacaattt cgatgaagta atggacgcgt gggatacgca
    12661 aatccgttat tacacgcgta aatcaatcga aatcgaatat gtcgtcgaca ccatgctgga
    12721 agagaacgtg cacgatattc tctgctcggc gctggtggat gactgtattg agcgagcgaa
    12781 aagtatcaag caaggcggcg cgaaatatga ctgggtttct ggcctgcagg ttggcattgc
    12841 caacctcggc aacagcctgg cggcagtgaa gaaactggta tttgaacagg gcgcgattgg
    12901 tcagcaacag ctggctgccg cactggcgga tgacttcgat ggcctgactc atgagcaact
    12961 gcgtcagcgg ctgattaacg gtgcgccgaa gtacggcaac gacgatgata ctgtcgatac
    13021 gctgctggct cgcgcttatc agacctatat cgacgaactg aaacagtacc ataatccgcg
    13081 ctacggtcgt ggtccggttg gcggcaacta ttacgcgggt acgtcatcta tctccgctaa
    13141 cgtaccgttt ggtgcgcaaa ctatggcaac gccggacggg cgtaaagccc acaccccgct
    13201 ggcagaaggc gctagtccgg cctctggtac tgaccatctc ggccctactg cggtcattgg
    13261 ctcggtgggt aaactgccta cggcagcgat tctcggcggc gtgttgctca accagaaact
    13321 gaatccggca acgctggaga acgaatctga caagcagaag ctgatgatcc tgctgcgcac
    13381 cttcttcgag gtgcataaag gctggcatat tcagtacaac atcgtttccc gcgaaacgct
    13441 gctggaggcg aaaaaacatc cggatcagta ccgcgatctg gtagtgcgtg tcgcgggtta
    13501 ttccgccttc ttcaccgcgc tctctccaga cgctcaggac gatatcatcg ctcgtactga
    13561 acatatgctg taatctcttc ggcccggctg cggcgtcgcc gggctaaatc attcacatca
    13621 tcaatttcat ccttactttc attcgaaata taatttgtgc tctgcgtcac attgttatta
    13681 cactgttacg gtttcatttt cgagccagga gcacacctat gagcgtaaaa gttatcgtca
    13741 cagacatgga cggtactttt cttaacgacg ccaaaacgta caaccaacca cgttttatgg
    13801 cgcaatatca ggaactgaaa aagcgcggca ttgagttcgt tgtcgccagc ggtaatcagt
    13861 attaccagct tatttcgttc tttcctgagc taaaggatga gatctctttt gtcgcggaaa
    13921 acggcgcact ggtttacgaa catggcaagc aactgttcca cggcgaactg acccgacatg
    13981 aatcgcggat tgttattggc gagttgctaa aagataagca actcaatttt gtcgcctgcg
    14041 gtctgcaaag tgcatatgtc agcgaaaatg cccccgaagc atttgtcgca ctgatggcaa
    14101 aacactacca tcgcctgaaa gctgtaaaag attatcagga gattgacgac gtactgttca
    14161 agttttcgct caacctgcca gatgaacaaa tcccgttagt gatcgacaaa ctgcacatag
    14221 cgttcgatgg cattatgaaa cccgtcacca gtggttttgg ctttatcgac ctgattattc
    14281 ccggtctaca taaagcaaac ggtatttcgc ggttactgaa acgctgggat ctgtcaccgc
    14341 aaaatgtggt agcgattggc gacagcggta acgatgcgga gatgctgaaa atggcgcgtt
    14401 attcctttgc gatgggcaat gctgcggaaa acattaaaca aatcgcccgt tacgctaccg
    14461 atgataataa tcatgaaggc gcgctgaatg tgattcaggc ggtgctggat aacacatccc
    14521 cttttaacag ctgacctctc taccggagcc gtgcgctccg gttttccctt ctttttacat
    14581 cctgtacatc acatcaaatc attaaacttg cattaactta tttataactt atattgtcac
    14641 atgcaaatca taatggtttc gaatgaaagt taatgagagg tggttatggc ttctactttt
    14701 accagcgaca cattgccagc cgatcacaaa gcagctatcc gtcagatgaa gcacgcgctg
    14761 cgggcgcagc ttggcgacgt ccagcagatc tttaatcagc taagcgatga cattgccacg
    14821 cgagtggctg aaatcaacgc actcaaagca cagggcgatg ccgtctggcc ggtgctgtct
    14881 tatgccgata tcaaagcagg tcatgttact gcagagcagc gcgaacagat taaacgtcgc
    14941 ggttgtgcgg tgataaaagg ccatttcccc cgcgaacaag cgctaggctg ggatcagtcg
    15001 atgctggact atctggaccg caaccgcttt gacgaggtct acaaaggccc cggcgataat
    15061 ttcttcggga cgctcagcac ttcacgtccc gagatttacc ccatctactg gtcgcagacg
    15121 caaatgcagg cccgccagag tgaagaaatg gcgaatgcgc agtcgtttct caatcgtctg
    15181 tggacatttg aaagtgatgg aaagcaatgg tttaacccgg atgtgagcgt catctaccct
    15241 gaccgtatcc gccgccgtcc gcccggaacg acctccaaag gtcttggagc gcataccgac
    15301 tccggggcgc tggaacgctg gctgcttcca gcgtatcagc gcgttttcgc caacgtcttt
    15361 aatggcaatc tggcgcaata tgatccctgg catgcggcac atcgtacgga agttgaagag
    15421 tacacggtgg acaacaccac caaatgttcc gtgtttcgga cattccaggg ctggacagcg
    15481 ctctctgata tgctgcctgg tcaggggttg ctgcacgttg tgcccattcc tgaagccatg
    15541 gcgtacgtac tgttacgtcc gctgcttgat gatgtgccgg aggatgaact gtgcggcgta
    15601 gcgcccggaa gagtgttgcc ggtatcagag caatggcatc cactgttaat tgaggcgtta
    15661 accagcattc caaaactcga ggccggagac tccgtctggt ggcactgcga cgtcatccat
    15721 tccgttgccc ccgttgaaaa tcaacagggt tggggcaacg tgatgtacat tcctgcggca
    15781 ccgatgtgcg agaaaaatct tgcctacgcg cacaaggtga aggccgcact ggaaaaaggc
    15841 gcatcgccgg gcgacttccc gcacgaggac tatgaaacaa actgggaagg acgctttacg
    15901 cttgccgacc tcaacattca cggtaagcga gcgttgggca tggatgtttg agagttaatg
    15961 gaagtgaatt gatgtgggat taagaaaatc gattcgacgt tactcagatt gctgacaagt
    16021 gcgctttctt aatgcctgat gcggcgttaa cgccttatct ggcctacaaa gtcctgcaga
    16081 ttcaatatat tacaggtact gcgtaggcct gataagcgta gcgcatcagg ctattttgca
    16141 tttgtcatca gccgccgtca ccccgacagt atcggggtga cggataatca cttactcgat
    16201 ccctttacta cgcaggtaat cttcgtaatt accgctaaag tcgatcacgc gttccggggt
    16261 gatttccaga atgcgggtcg ccagggagct tacgaactca cggtcgtgtg aaacaaagat
    16321 cagcgtgccc tgatacagtt ccagcgccat gttcagtgac tcgatggatt ccatatccag
    16381 gtggttggtc ggttcgtcca tgatcagaat gttcggcttc tgcatcatta acttaccaaa
    16441 cagcatccgc cctttttccc caccggaaag cactttagct ggctttttga tgtcgtcctg
    16501 gctgaacagc aaacgaccga gaatgctgcg taccgcctgc tcgtcatcgc cttcctgctt
    16561 ccactgactc atccattcga acacggtcag atcattttca aactcatatt cgtggtcctg
    16621 ggcgtagtaa ccaatgcgcg cgttttcaga ccattttacg gtgccgctgt ccggttgcag
    16681 atcgcccacc agcgttttca tcagcgttga tttaccgacg ccgttggtac ccagtaccgc
    16741 aagtttttca ccgacctcca gcagcaggtt gagattttta aacagtggac cgttatcaaa
    16801 ccctttggtc agaccttcca cttccagcgc gttacggaac agtttcttat cctgttcaaa
    16861 acggatgaac gggttctgac ggctggaggc tttcacctct tccagtttga ttttatcaat
    16921 ctggcgcgcg cgcgaagttg cctggcgaga tttcgaggcg ttggcgctaa agcggctaac
    16981 gaaagattgc aactcagcaa tctgcgcttt cttcttggcg ttatcggcca gcagacgttc
    17041 acgcgcctgg gtcgccgccg tcatgtactc atcgtagtta cccggataaa cgcgcagctc
    17101 gccgtaatcc agatccgcca tgtgggtaca gaccatgtta aggaagtgac ggtcgtgcga
    17161 gatgatgatc atggtgctgt cacgctcgtt cagcacctgt tccagccagc gaatggtgtc
    17221 gatgtcgagg ttgttggtcg gttcgtcgag caggagaata tccggatcag caaacagcgc
    17281 ctgcgccaga agcacacgca gcttccagcc aggagcaact tcactcatcg ggccgtagtg
    17341 ctgttccact ggaattccca cgccaagcaa caattcaccg gcgcgagctt ccgcagagta
    17401 accgtccatt tcgccgtatt taacttccag atcggccact ttatagccgt cttcctcact
    17461 catttccggc aaagcataga tgcggtcacg ctcctgcttc acttcccaca actctttatg
    17521 ccccatgatc accgtatcca gcacagtgaa ctcttcaaag gcaaactgat cctgacgcag
    17581 cttaccaatg cgctcgttgg gatcgaggga aacgttaccc aaagtcggct ctaagtcgcc
    17641 gccgaggatc ttcataaagg tggatttacc actaccgttc gcgccaatca ggccgtaacg
    17701 gttgccgccg ccaaatttga cggaaatgtt ttcaaacaac ggcttactgc cgaactgcat
    17761 ggtgacgtta ctggaaacta acacaggcgt atcctgaaaa gagatatgac aaaccgcgca
    17821 ttatgccata agtctgaaag aagatcctgc tcctcgctta aggtctacac tcaagccaaa
    17881 ggcaaaaaat gtgatttcgt acacatctga tttcactgtg agctggaatg aacttataat
    17941 gcgcttccaa tactctaata ttctcaaccc aatggcctgc caggcacaaa atctcgctta
    18001 acatgaatat gaaattgaaa acattattcg cagcggcctt cgctgttgtc ggcttttgca
    18061 gtaccgcctc tgcggtaact tatcctctgc caaccgacgg gagtcgcctg gttggtcaga
    18121 atcaggtgat caccattcct gaaggtaaca ctcagccgct ggagtatttt gccgcggagt
    18181 accagatggg gctttccaat atgatggaag cgaacccggg tgtggatacc ttcctgccga
    18241 aaggcggtac tgtactgaac attccgcagc agctgatcct gccggatacc gttcatgaag
    18301 gcatcgtcat taacagtgca gagatgcgtc tgtattacta tccgaaaggg accaacaccg
    18361 ttatcgtgct gccgatcggc attggtcagt taggcaaaga tacgcctatc aactggacca
    18421 ccaaagttga gcgtaagaaa gcaggcccga cctggacgcc gaccgcaaaa atgcacgcag
    18481 agtaccgcgc tgcgggcgaa ccgcttccgg ctgtcgttcc ggcaggtccg gataacccga
    18541 tgggtctgta tgcactctac atcggtcgcc tgtatgctat ccatggcacc aacgccaact
    18601 tcggtatcgg cctgcgtgta agtcatggtt gtgtgcgtct gcgtaacgaa gacatcaaat
    18661 tcctgttcga gaaagtaccg gtcggtaccc gcgtacagtt tattgatgag ccggtaaaag
    18721 cgaccaccga gccagacggc agccgttata ttgaagtcca taacccgctg tctaccaccg
    18781 aagcccagtt tgaaggtcag gaaattgtgc caattaccct gacgaagagc gtgcagacag
    18841 tgaccggtca gccagatgtt gaccaggttg ttcttgatga agcgattaaa aaccgctccg
    18901 ggatgccggt tcgtctgaat taatcttcaa aacttaaagc aaaaggcgga ctcataatcc
    18961 gcctttttta tttgccagac cctagttggc cgggagtata actaacaaaa catatcccac
    19021 caacgccgcc cacaacagca tcggtattga atagagatgg aaacgccacc agatgcggcg
    19081 atcgttcgcc atacgtagcg caatcaaact tgccagcgat ccgggtaata acccaaagcc
    19141 acctacgttt accgcccatg ccagtaataa agacggcggc acatagttca gcaacaatat
    19201 ggtactcggc acgttactga tcacctgcga taaaccgatt gccgttaacc ataacccggg
    19261 ttcagataga tgactcacgt tacccaacac gccttgcaac gctggaagct gggtcagtaa
    19321 atggacgtcg ataaacatcg ccataaacac cagcagcagc gtccagtcca cactgagcac
    19381 cacgcgacgt gccagcagcg caaagcctgc cgccacaatc accagtcccc acagctcttg
    19441 tttgaactcc agcgccgtta gaaagacgat atacagcccc agacaactcc acaccagccg
    19501 cggtttccac tccggtgttt gcacccccgt atggtattgc agcacctttc cagggaaaca
    19561 acaccagcac aggagcagga gcgtcagcat cattgcgcca gccagcggtg ccatttgggc
    19621 aataaatccg gcaaacgaaa gaccagaacg tccccagata agaatatttt gcgggttgcc
    19681 aattggcgtc agtagcgaac cagcattgac tgccagcgcc tcaaaaataa tcagacgatt
    19741 aaccgggatc tcacacagtc tttttagcgt gatagtcagc ggaacaacaa taaacagcgc
    19801 gacatcgttg gtcagaaagg tagaaagcag cgccgccgcc agcaccataa acatcgccag
    19861 ccgacgctcc gtagcaaagc ggcgcaccat tttgcgcccc agcacatcaa aataaccgct
    19921 taactccaca cctttggtca gcagcatcag gccgcttaag gtgatgatgg tgtgccagtc
    19981 gatagcagca ggccaggatt tcggtgcaaa gggcacgaaa aagcttaatc cgataccaac
    20041 aagaattaat aactgaaaaa aacgatcgcc ttgcagcgtg cgtaaaaaag gcaggctcat
    20101 ttggtaccgt gtttctgggt aaacaaacga aaagcgtcga gcgtctcttc actaacatgg
    20161 tgctccatgc cttccgcgtc gcgacgggcg atttccggac tgacgcccaa caccaacaag
    20221 aaattttcga ctatctgatg tcgctcgcgg ctttcctgcg ccagcttctc tccttctgcc
    20281 gttaaaaaca cgccacgcca ggggatcatt tcaatcagcc ccatggttgc cagccgctta
    20341 agcattttag ccaccgtcgg ttgcgaaact cccagacgag cagccatgtc cacctgacga
    20401 gcttccccca cttccctgat caagtcagaa atcagctcaa cgtaatcatc aataagctcg
    20461 cgccgatgcg cctctctgac ctggcggaac ccttcaacgt gctcttccac gttcactaac
    20521 tgcgtcactt tttttgctgt tggcgtacct gcgcgacgac tcattgtgct tcctcattat
    20581 ggtgacgcat acatagcgtt ctcatttcgt gcgcacattg taaaccagag ttgcgaaggt
    20641 acaaaaaatt aacgttttag caatagctat ataatatagc ctgtgctata tctgtatgta
    20701 atgcaatcat ccctcaagga tcgacgggat tagcaagtca ggaggtctta tgaatgagtt
    20761 caagaggtgt atgcgcgtgt ttagtcattc tccctttaaa gtacggttaa tactgctctc
    20821 tatgttgtgc gatatggtca acaacaaacc gcagcaagat aaaccttccg ataaatagcg
    20881 gcgtcgcggt acgccgcttc actcctgctt tcatgcaggc ataacgcgtt ttggcctgaa
    20941 aaaccccact ttttgtcgga tttgcaatcc ccttcgcaaa agatttgttc gtcagtagtt
    21001 gacctgaacg gcggctcgct ctatcttctt gcagccctgc gtatattgcg gctcgcggat
    21061 gcggacccct ttccactctt cacgcactct tgcaggtatt gacccttgac gccagggtaa
    21121 gcacatggcg tttgttacga tagtggcata tgaatttaac cctcaaagaa tcgcttgtta
    21181 cccgtagccg ggtatttagc ccgtggactg cgttctactt tttacagtcg ctattaatta
    21241 acctcggctt aggttacccc ttcagtttgc tctacaccgc tgcgtttacg gctattttgc
    21301 ttttgctatg gcgaacattg cctcgcgtac aaaaagttct ggtcggtgtc agttcgctgg
    21361 tggcggcttg ttatttccct tttgctcagg cctacggcgc gcctaatttc aatacattgc
    21421 tggcattgca ctccaccaat atggaagagt cgaccgaaat cctgacgatt tttccgtggt
    21481 acagctacct ggtcggctta tttatttttg cgctcggcgt aatagcaatc aggcgaaaaa
    21541 aagagaatga aaaagcgcgc tggaatacct tcgacagcct gtgtctggta ttcagtgtgg
    21601 cgacattttt tgttgctccc gtgcaaaacc tggcctgggg tggcgtattt aaactgaaag
    21661 atactggcta tccggtattt cgttttgcta aggatgtcat cgtcaataat aacgaggtga
    21721 ttgaagagca agaacggatg gcaaaacttt ccggaatgaa agatacctgg acggtcactg
    21781 ccgttaagcc gaagtatcag acctatgtgg tggtgatcgg tgaaagcgcg cgtcgcgatg
    21841 ccctcggtgc ctttggcggt cactgggaca ataccccgtt tgccagcagc gttaacggtt
    21901 tgatatttgc tgactacatt gccgccagtg gctccacgca gaaatcgctt ggcttaacgc
    21961 tcaatcgcgt agtcgatggc aaaccacagt ttcaggataa ctttgtcacc ctggcaaatc
    22021 gcgcgggctt ccagacctgg tggttttcca accagggcca aatcggcgaa tacgatactg
    22081 ctatcgccag catcgccaaa cgtgcagatg aagtgtactt cctgaaagaa ggtaattttg
    22141 aagcagataa aaacacgaaa gacgaagcgt tactggatat gaccgctcaa gtgctggcgc
    22201 aagagcactc gcaaccgcag ctgattgttc tgcatctgat gggctcgcat ccgcaggcct
    22261 gcgacaggac acaaggcaaa tacgaaacct ttgtgcaatc gaaagaaacg tcgtgctatc
    22321 tctataccat gacgcaaacg gacgatttac tgcgcaagct gtacgatcag ttacgcaaca
    22381 gcggcagcag cttctctctg gtttactttt ctgaccacgg tctggccttt aaagagcgcg
    22441 gcaaagacgt gcaatacctt gcccatgatg ataaatatca gcaaaatttc caggtgcctt
    22501 ttatggtcat ttccagcgac gataaagcgc atcgggtgat taaagcccgc cgctcagcca
    22561 atgacttctt aggctttttc tcgcagtgga cgggaattaa agcgaaggaa ataaatatca
    22621 aatacccgtt tatatctgag aagaaagccg ggccgatata catcaccaac ttccagttac
    22681 agaaggtgga ttacaaccat ctcggaaccg atattttcga cccgaaacct taaaaacaaa
    22741 aatccgcccc gagaggcgga ttttttatat caccaaagtg attagaagcg gtaaccaaca
    22801 ccggcaatcc aggtgcctac gtcaacgcta cgaatacggc tctgctcgta agagaagtcc
    22861 agagcaacgt tttccatcgg gttgaactgc agaccagcac cgtaggagaa accgtagtcg
    22921 ctggtgtcgt gtttgtaggt cgggtattca gtggtctgga atttaccata acccacaccc
    22981 actacaccgt agatgcttgc ccagtcgtta atgcggtaag ccggaccagc agtgatgccg
    23041 tagtactggt ttttgttgta gtcaccagag cttgcagtac gacttttctc ggtgtaagtg
    23101 aaagaaccga tcacacccag cgggctgttg tcttcttcat agcggtattt caggttgaaa
    23161 ccgcccattt tgttcatttg gccctgagcg tcgctctgtg cgtaaccgcc agttacggta
    23221 gaagtcgcag ctacggaagt acctgcggtg aaagccagaa ctgcggccag tgctgaaaga
    23281 catgcaattt ttttcataac cacctcaaat gtgattcaaa taagtcctaa gttttaaata
    23341 tatcaaaaat taatgggaaa ctcttcgcga tttgtgatgt ctaacgggcc atttcatgta
    23401 acagaacgtt tccatacacc gctatccatc taaatttaaa tcactttttc agagaactgc
    23461 gtaagtatta cgcatgtttt ccctgtcatt catccagatt attcctaatc accagactaa
    23521 tgattccatc aatcctggcg cattttagtc aaaacggggg aaaatttttt caacaaatgc
    23581 tcaaccagca ttgggtatat ccagtacact ccacgcttta cttaagtcta gatatttgtg
    23641 ggagaaagga tgcctggttc attacgtaaa atgccggtct ggttaccaat agtcatattg
    23701 ctcgttgcca tggcgtctat tcagggtgga gcctcgttag ctaagtcact ttttcctctg
    23761 gtgggcgcac cgggtgtcac tgcgctgcgt ctggcattag gaacgctgat cctcatcgcg
    23821 ttctttaagc catggcgact gcgctttgcc aaagagcaac ggttaccgct gttgttttac
    23881 ggcgtttcgc tgggtgggat gaattatctt ttttatcttt ctattcagac agtaccgctg
    23941 ggtattgcgg tggcgctgga gttcaccgga ccactggcgg tggcgctgtt ctcttctcgt
    24001 cgcccggtag atttcgtctg ggttgtgctg gcggttcttg gtctgtggtt cctgctaccg
    24061 ctggggcaag acgtttccca tgtcgattta accggctgtg cgctggcact gggggccggg
    24121 gcttgttggg ctatttacat tttaagtggg caacgcgcag gagcggaaca tggccctgcg
    24181 acggtggcaa ttggttcgtt gattgcagcg ttaattttcg tgccaattgg agcgcttcag
    24241 gctggtgaag cactctggca ctggtcggtt attccattgg gtctggctgt cgctattctc
    24301 tcgaccgctc tgccttattc gctggaaatg attgccctca cccgtttgcc aacacggaca
    24361 tttggtacgc tgatgagcat ggaaccggcg ctggctgccg tttccgggat gattttcctc
    24421 ggagaaacac tgacacccat acagctgctg gcgctcggcg ctatcatcgc cgcttcaatg
    24481 gggtctacgc tgacagtacg caaagagagc aaaataaaag aattagacat taattaaatt
    24541 tacatttctg catggttatg cataaccatg cagaatttct cgctactttt cctctacacc
    24601 gtctttatat atcgaattat gcaaaagcat atttattccg aaaattcctg gcgagcagat
    24661 aaataagaat tgttcttatc aatatatcta actcattgaa tctttattag ttttgttttt
    24721 cacgcttgtt accactatta gtgtgatagg aacagccaga atagcggaac acatagccgg
    24781 tgctatactt agtctcgtta attactggga cataacatca agaggatatg aaattatgag
    24841 taccgctaaa ttagttaaat caaaagcgac caatctgctt tatacccgca acgatgtctc
    24901 cgacagcgag aaaaaagcaa cagtagagtt gctgaatcgc caggttatcc agtttattga
    24961 tctttctttg attaccaaac aagcgcactg gaacatgcgc ggcgctaact tcattgccgt
    25021 acatgaaatg ctggatggct tccgcaccgc actgatcgat catctggata ccatggcaga
    25081 acgtgcagtg cagctgggcg gtgtagctct ggggaccact caagttatca acagcaaaac
    25141 cccgctgaaa agttacccgc tggacatcca caacgttcag gatcacctga aagaactggc
    25201 tgaccgttac gcaatcgtcg ctaatgacgt acgcaaagcg attggcgaag cgaaagatga
    25261 cgacaccgca gatatcctga ccgccgcgtc tcgcgacctg gataaattcc tgtggtttat
    25321 cgagtctaac atcgaataaa tccatcgctg atggtgcaga actttagtac ccgataaaag
    25381 cggcttcctg acaggaggcc gttttgtttt gcagcccacc tcaacgcact tatttagtgc
    25441 atccatctgc tatctccagc tgattaagta aattttttgt atccacatca tcacacaatc
    25501 gttacataaa gattgttttt tcatcaggtt ttacgctaaa taatcactgt gttgagtgca
    25561 caattttagc gcaccagatt ggtgccccag aatggtgcat cttcagggta ttgccctata
    25621 aatcgtgcat cacgtttttg ccgcatctct aaaaatcaat gagttgcaaa actggcacga
    25681 ttttttcata tatgtgaatg tcacgcaggg gatcgtcccg tggatagaaa aaaggaaatg
    25741 ctatgaagtc tgtattaaaa gtttcactgg ctgcactgac cctggttttt gcggtttctt
    25801 ctcatgccgc ggataaaaaa ttagttgtcg cgacggatac cgccttcgtt ccgtttgaat
    25861 ttaaacaggg cgataaatat gtgggctttg acgttgatct gtgggctgcc atcgctaaag
    25921 agctgaagct ggattacgaa ctgaagccga tggatttcag tgggatcatt ccggcactgc
    25981 aaaccaaaaa cgtcgatctg gcgctggcgg gcattaccat caccgacgag cgtaaaaaag
    26041 cgatcgattt ctctgacggc tactacaaaa gcggcctgtt agtgatggtg aaagctaaca
    26101 ataacgatgt gaaaagcgtg aaagatctcg acgggaaagt ggttgctgtg aagagcggta
    26161 ctggctccgt tgattacgcg aaagcaaaca tcaaaactaa agatctgcgt cagttcccga
    26221 acatcgataa cgcctatatg gaactgggca ccaaccgcgc agacgccgtt ctgcacgata
    26281 cgccaaacat tctgtacttc atcaaaaccg ccggtaacgg tcagttcaaa gcggtaggtg
    26341 actctctgga agcgcagcaa tacggtattg cgttcccgaa aggtagcgac gagctgcgtg
    26401 acaaagtcaa cggcgcgttg aaaaccctgc gcgagaacgg aacttacaac gaaatctaca
    26461 aaaaatggtt cggtactgaa ccgaaataat aacgctacac ctgtaaagcg cactggcagt
    26521 tccctctccc ctctggggag aggattaggg tgaggggcgc aaacccgctc cggggccatt
    26581 aattaccctg aatttgatta tttacaccac ggtaacagga acaacatatg cagtttgact
    26641 ggagtgccat ctggcctgcc attccgcttc tgattgaagg tgccaaaatg accctgtgga
    26701 tttcggtcct cggtctggct ggcggtctgg taatcggatt gctggcaggt tttgcacgca
    26761 ccttcggtgg ttggatagcc aaccacgtcg cgctggtctt tattgaagtg atccgcggca
    26821 cacctatcgt cgtccaggtg atgtttatct atttcgccct gccgatggcg tttaacgact
    26881 tacgcatcga cccatttact gcggcggtgg tcaccatcat gatcaactcc ggcgcgtaca
    26941 ttgcggaaat cacgcgtggt gcggtgctgt ctattcacaa aggttttcgt gaagcaggac
    27001 tggcgctcgg tctttcacgt tgggaaacca ttcgctacgt cattttaccg ctggcactgc
    27061 gtcgtatgct gccgccgctg ggtaaccagt ggatcatcag cattaaagac acctcgctgt
    27121 ttattgttat cggcgtggcg gaactgaccc gtcaggggca agaaattatt gccggtaact
    27181 tccgcgccct tgagatctgg agcgccgtgg cggtgttcta tctgattatt accctggtgc
    27241 tgagctttat tctgcgtcgt ctggaaagaa ggatgaaaat cctgtgattg aatttaaaaa
    27301 cgtctccaag cactttggcc caacccaggt gctgcacaat atcgatttga acattgccca
    27361 gggcgaagtc gtggtgatta tcgggccgtc cggttccggt aaatcgaccc tgctgcgctg
    27421 catcaacaaa ctggaagaaa tcacctccgg cgatctgatt gtcgatggcc tgaaggttaa
    27481 cgatccgaaa gttgacgagc gcctgattcg ccaggaagca ggtatggtgt tccagcagtt
    27541 ttacctcttc ccgcatctga cggcgctgga aaacgtcatg tttggtccgc tacgcgtgcg
    27601 tggcgcgaac aaagaagagg cggaaaaact ggcgcgtgag ctgctggcga aagtcggtct
    27661 ggcagaacgt gcacatcact acccttccga actttctggt ggtcaacagc agcgtgtggc
    27721 gattgcccgc gcgctggcgg tgaagccgaa aatgatgctg tttgatgaac cgacttccgc
    27781 tcttgacccg gaactgcgcc atgaagtgct gaaggttatg caggatctgg ctgaagaagg
    27841 gatgacgatg gtgatcgtga cccacgaaat cggttttgcc gagaaagtag cttcgcggct
    27901 gatctttatc gacaaaggcc ggattgcgga agatggcaat ccgcaggtgt tgatcaagaa
    27961 cccgccgagc cagcgcttgc aggaattttt gcagcacgtc tcttaataag acacattgcc
    28021 tgatgcgcta cgcttatcag gcctacagga tatctggcaa cttattaaaa ttgcatgaac
    28081 ttgtaggacg gataaggcgt tcacgccgca tccggcaaaa aagcccgcac gttgtcagca
    28141 atctgcttaa tatcccttcc tccctttcac ccgaaaggga ggcacaccag attcctctca
    28201 tttaaaatcg cccc
//
LOCUS       DAJVUK010000036        28139 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.036, whole genome shotgun sequence.
ACCESSION   DAJVUK010000036 DAJVUK010000000
VERSION     DAJVUK010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28139
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.036"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            44..811
                     /gene="hdhA"
                     /locus_tag="OQQ57_001493"
     CDS             44..811
                     /gene="hdhA"
                     /locus_tag="OQQ57_001493"
                     /EC_number="1.1.1.159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-alpha-hydroxysteroid dehydrogenase"
                     /protein_id="HCS1956305.1"
                     /translation="MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN
                     ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK
                     PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
                     SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL
                     GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN"
     gene            1040..1618
                     /gene="uidR"
                     /locus_tag="OQQ57_001494"
     CDS             1040..1618
                     /gene="uidR"
                     /locus_tag="OQQ57_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator UidR"
                     /protein_id="HCS1956306.1"
                     /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
                     PGTLYHHFISKEALIQAIILQDQERAREPIEGIHFVDYMVESIVSLTHEAFGQRALVV
                     EIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTY
                     GVLADIEAEDLAREASFAQGLRAMIGGILTAS"
     gene            2006..3806
                     /gene="uidA"
                     /locus_tag="OQQ57_001495"
                     /pseudo
     CDS             2006..3806
                     /gene="uidA"
                     /locus_tag="OQQ57_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416134.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
     gene            3803..5176
                     /gene="uidB"
                     /locus_tag="OQQ57_001496"
     CDS             3803..5176
                     /gene="uidB"
                     /locus_tag="OQQ57_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HCS1956307.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVACVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYERYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARSGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI
                     ANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQ
                     LISDITN"
     gene            5215..6480
                     /gene="uidC"
                     /locus_tag="OQQ57_001497"
     CDS             5215..6480
                     /gene="uidC"
                     /locus_tag="OQQ57_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide uptake porin UidC"
                     /protein_id="HCS1956308.1"
                     /translation="MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRA
                     DKPSAGAGRDIYAWVQRGLFDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGD
                     KSFGFALGAVKIKPCENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
                     YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDT
                     SRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETA
                     LVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVN
                     YRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKG
                     REKRDGSTLGDRLNYWDVKMSIQYDFMLK"
     gene            complement(6706..8214)
                     /locus_tag="OQQ57_001498"
     CDS             complement(6706..8214)
                     /locus_tag="OQQ57_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HCS1956309.1"
                     /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
                     QEKVTEAFFSALPLMLKGDPVITVAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYTNGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
     gene            complement(8315..9490)
                     /gene="manA"
                     /locus_tag="OQQ57_001499"
     CDS             complement(8315..9490)
                     /gene="manA"
                     /locus_tag="OQQ57_001499"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HCS1956310.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPNAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            9689..11335
                     /gene="fumB"
                     /locus_tag="OQQ57_001500"
     CDS             9689..11335
                     /gene="fumB"
                     /locus_tag="OQQ57_001500"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HCS1956311.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
     gene            11478..12881
                     /gene="fumC"
                     /locus_tag="OQQ57_001501"
     CDS             11478..12881
                     /gene="fumC"
                     /locus_tag="OQQ57_001501"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HCS1956312.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DSWVRPEQMVGSMKAGR"
     gene            complement(12878..13807)
                     /gene="tus"
                     /locus_tag="OQQ57_001502"
     CDS             complement(12878..13807)
                     /gene="tus"
                     /locus_tag="OQQ57_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HCS1956313.1"
                     /translation="MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRSLT
                     VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(13883..15184)
                     /gene="rstB"
                     /locus_tag="OQQ57_001503"
     CDS             complement(13883..15184)
                     /gene="rstB"
                     /locus_tag="OQQ57_001503"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HCS1956314.1"
                     /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
                     SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA
                     LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH
                     WQDMLKLEAAAQRFGDGHLYERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH
                     LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRY
                     CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
                     IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            complement(15188..15907)
                     /gene="rstA"
                     /locus_tag="OQQ57_001504"
     CDS             complement(15188..15907)
                     /gene="rstA"
                     /locus_tag="OQQ57_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HCS1956315.1"
                     /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
                     NPDLVLLDIMLPGKDGITICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
                     MPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI
                     SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRNVDVAISRLRKKLLDNAA
                     EPYRIKTVRNKGYLFAPHAWE"
     gene            16033..16356
                     /locus_tag="OQQ57_001505"
     CDS             16033..16356
                     /locus_tag="OQQ57_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
                     /protein_id="HCS1956316.1"
                     /translation="MKAALGVLVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVAS
                     ERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIIC
                     WIKLH"
     gene            complement(16353..17075)
                     /gene="folM"
                     /locus_tag="OQQ57_001506"
     CDS             complement(16353..17075)
                     /gene="folM"
                     /locus_tag="OQQ57_001506"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HCS1956317.1"
                     /translation="MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKLGAPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLLTSCFVTGRSFPLDGGRHLR"
     gene            complement(17112..18494)
                     /locus_tag="OQQ57_001507"
     CDS             complement(17112..18494)
                     /locus_tag="OQQ57_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1956318.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLVLGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAASLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            complement(18680..19624)
                     /locus_tag="OQQ57_001508"
     CDS             complement(18680..19624)
                     /locus_tag="OQQ57_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1956319.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            20147..21679
                     /gene="pntA"
                     /locus_tag="OQQ57_001509"
     CDS             20147..21679
                     /gene="pntA"
                     /locus_tag="OQQ57_001509"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HCS1956320.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     TGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRRVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            21690..23078
                     /gene="pntB"
                     /locus_tag="OQQ57_001510"
     CDS             21690..23078
                     /gene="pntB"
                     /locus_tag="OQQ57_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HCS1956321.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQDVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(23103..24008)
                     /gene="tqsA"
                     /locus_tag="OQQ57_001511"
                     /pseudo
     CDS             complement(23103..24008)
                     /gene="tqsA"
                     /locus_tag="OQQ57_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
     gene            24185..25414
                     /locus_tag="OQQ57_001512"
     CDS             24185..25414
                     /locus_tag="OQQ57_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCS1956322.1"
                     /translation="MSRAMNKLSDTLLRKLHGKPAEKNTFYSDGGNLSVKYLTSGKLT
                     WYFIYRAGTGRETRPERIKLGSYPDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQE
                     ALKPVTVGDALTYWLEYYVKENRVDYIALKRRLNNHVIQQIGAMPLDKCELRHWLACF
                     DQVAKRTPVTAGFVLQACKQALKFCRRRRYAISNVLDDLNVADVGKKPDISERVLSNK
                     ELGELLQALDKKIFSPYYVALIRLLIVFGARTVELRLSEIGEWDFTEMLWTVPKEHSK
                     TKVAIFRPIPEAILPFVTQLVEQNRHTGLLLGEVKQEASVSQYGRLAHRRLNHPHWSL
                     HDIRRTFTTMLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNALDMWTERLGI
                     LAGTHENVTTLPVARRK"
     gene            25781..25969
                     /locus_tag="OQQ57_001513"
     CDS             25781..25969
                     /locus_tag="OQQ57_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001443601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HCS1956323.1"
                     /translation="MLSTDRFIREKECEKLTGLSRTCRYRLEKAGQFPSRRKLGGRSV
                     GWSLSEVLAWKDSCKAVH"
     gene            26027..27049
                     /locus_tag="OQQ57_001514"
     CDS             26027..27049
                     /locus_tag="OQQ57_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001429961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HCS1956324.1"
                     /translation="MKIEYTPERGRGFVRPGETEKQQNWGFSGIKKAAPKWSRLSEQI
                     TRCAVCVCDPKHKHGDDSRYQAGGQCNQSGSVRCHTCNERFSLYSLRNCSRAKAHGAN
                     LSDSCSIFLRRLFRAGDNVLVNSLSVIVLSCIAMRRNTLHHGADGDYSGSLALRRWRY
                     STSRFNAAVTNCPVLSPGIFTASTLFITSCGTLAATVCDFAFTAFVAMWCTPHKKQMQ
                     YAGKKISVQHLTCLTPGFKLVFNTLLAQGAETTKPGSALTLTGLLTTNDSESIEVAMR
                     NHTIHPQGRDSHNLNKYIWRFIALSTAQPRVITIEATSEQEARQQSPAGCVMVFAARI
                     RQGVGL"
     gene            27046..27276
                     /locus_tag="OQQ57_001515"
     CDS             27046..27276
                     /locus_tag="OQQ57_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000076676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956325.1"
                     /translation="MSQEITLQQAAERAHQIEVICALAEDYPGMMTDSESGAIIGLLK
                     RLSGEVCVFLSDEQERRTLISNEKKCGGVHVQ"
     gene            27266..27490
                     /locus_tag="OQQ57_001516"
     CDS             27266..27490
                     /locus_tag="OQQ57_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000336139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956326.1"
                     /translation="MCNKTTPDAAAAALTTLMHALIDISVIADRAHKHAARESECIFH
                     YLTFVQLKADQALDKAGKIIMADVQEVHHA"
     gene            27483..28061
                     /locus_tag="OQQ57_001517"
     CDS             27483..28061
                     /locus_tag="OQQ57_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000551752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956327.1"
                     /translation="MHNLSISDLNSIQFDEKFTGQLLVNVENGRIVRNYHLPDGAIAG
                     SVEALLELAERARLIKPSTSHHDDDLHFTGCMVSHYENGVEVSCERLRDDCCFGTLPE
                     FIELLTSCGYQVIQGVNMRDDRFNSLKQEFSGVPDDAADALSSMPELIRAAFFLLSTR
                     EYKSTGLDVLNIVADYADFVTEVILRKTTDGD"
BASE COUNT         7177 a         6692 c         7283 g         6987 t
ORIGIN      
        1 aggcggtgcc ttttattttt actgaagttc acaggaggtt tatgtgttta attctgacaa
       61 cctgagactc gacggaaaat gcgccatcat cacaggtgcg ggtgcaggta ttggtaaaga
      121 aatcgccatt acattcgcga cagctggcgc atctgtggtg gtcagtgata ttaacgccga
      181 cgcagctaac catgttgtag acgaaattca acaactgggg gggcaggcat ttgcctgccg
      241 ttgtgatatt acttccgaac aggaactctc tgcactggca gactttgcta tcagtaagct
      301 gggtaaagtt gatattctgg ttaacaacgc cggtggcggt ggacctaaac cgtttgatat
      361 gccaatggcg gattttcgcc gtgcttatga actgaatgtg ttttcttttt tccatctgtc
      421 acaacttgtt gcgccagaaa tggaaaaaaa tggcggtggc gttattctga ccatcacttc
      481 tatggcggca gaaaataaaa atataaacat gacttcctat gcatcatcta aagctgcggc
      541 cagtcatctg gtcagaaata tggcatttga cctgggtgaa aaaaatattc gggtgaatgg
      601 cattgcgccg ggggcaatat taaccgatgc cctgaaatcc gttattacac cagaaattga
      661 acaaaaaatg ttacagcaca cgccgatcag acgtctgggt caaccgcaag atattgctaa
      721 cgcggcgctg ttcctttgct cgcctgcagc cagctgggta agcggacaaa ttctcaccgt
      781 ctccggtggt ggggtacagg agctcaatta atacactaac gaaccggtaa acagccgtat
      841 gtgttgttta ccgggatagc gtgtgcaatt catcaacgtc tctgctaaac aactggcagc
      901 caaatcacgg ctattggtta accaatagct ggatgaaaag catacgaata gagtgtgcct
      961 tcgcactatt caacagcaat gataggcgct cacctgacaa cgcggtaaac tagttattca
     1021 cgctaactat aatggtttaa tgatggataa catgcagact gaagcacaac cgacacggac
     1081 ccggatcctc aatgctgcca gagagatttt ttcagaaaat ggatttcaca gtgcctcgat
     1141 gaaagccatc tgtaaatcct gcgccattag tcccgggacg ctttatcacc atttcatctc
     1201 caaagaagcc ttgattcagg cgattatctt acaggaccag gagagggcgc gggaaccgat
     1261 tgaagggatt cattttgttg actatatggt cgagtctatt gtctctctca cccatgaagc
     1321 ctttgggcaa cgggcgctgg tggtcgaaat tatggcggaa gggatgcgta acccacaggt
     1381 cgccgccatg cttaaaaata agcatatgac gatcactgaa tttgttgccc agcggatgcg
     1441 tgatgcccag caaaaaggcg agataagccc agacatcaac acgtcaatga cttcacgttt
     1501 actgctggat ctgacctacg gtgtactggc cgatatcgaa gcggaagatc tggcgcgtga
     1561 agcgtcgttt gctcagggat tacgcgcgat gattggcggt atcttaaccg catcctgatc
     1621 ctctcatttc gcgggctggt gataactgtg cccgcgtttc atactttaat ttccctgtac
     1681 aaaatacaat ctagccggga tcggagaatt cccccccaaa atattcaccg tagccatatg
     1741 tcatgagagt ttatcgttct caagatgctc gaacgagcgt tcgattgctt attttatggc
     1801 ttctgtcaac gctgttttaa agattaatgc gatctatatc acgctgtgcg tattgcagat
     1861 tttggttttt tgatcgcggt gtcagttctt tttatttcca tttctcttcc atgggtttct
     1921 cacagataac tgtgtgcaac acagaattgg ttaactaatc agattaaagg ttgaccagta
     1981 tttttatttg aatgaggagt cccttatgtt acgtcctgta gaaaccccaa cccgtgaaat
     2041 caaaaaactc gacggcctgt gggcattcag tctggatcgc gaaaactgtg gaattgatca
     2101 gcgttggtgg gaaagcgcgt tacaagaaag ccgggcaatt gctgtgccag gcagttttaa
     2161 cgatcagttc gccgatgcag atattcgtaa ttatgtgggc aacgtctggt atcagcgcga
     2221 agtctttata ccgaaaggtt gggcgggcca gcgtatcgtg ctgcgtttcg atgcggtcac
     2281 tcattacggc aaagtgtggg tcaataatca ggaagtgatg gagcatcagg gcggctatac
     2341 gccatttgaa gccgatgtca cgccgtatgt tattgccggg aaaagtgtac gtatcaccgt
     2401 ttgtgtgaac aacgaactga actggcagac tatcccgccg ggaatggtga ttaccgatga
     2461 aaacggcaag aaaaagcagt cttacttcca tgatttcttt aactatgccg ggatccatcg
     2521 cagcgtaatg gtctacacca cgccgaacac ctgggtggac gatatcaccg tggtgacgca
     2581 tgttgcgcaa gactgtaacc acgcgtctgt tgactggcag gtggtagcaa atggtgatgt
     2641 cagcgttgaa ctgcgtgatg cggatcagca ggtggttgca actggacaag gtaccagcgg
     2701 gactttgcaa gtggtgaatc cccacctctg gcaaccgggt gaaggttatc tctatgaact
     2761 gtgcgtcaca gccaaaagcc agacagagtg tgatatctac ccgctgcgcg tcggcatccg
     2821 gtcagtggca gtgaaggacg aacaaccaca aaccgttcta ctttactggc tttggtcgtc
     2881 atgaagatgc ggatttgcga ggcaaaggat tcgataacgt gctgatggtg cacgatcacg
     2941 cattaatgga ctggattggg gccaactcct accgaacctc gcattaccct tacgctgaag
     3001 agatgctcga gtgggcagat gaacatggca tcgtggtgat tgatgaaact gcagctgtcg
     3061 gctttaacct ctctttaggc attggtttcg aagcgggcaa caagccgaaa gaactgtaca
     3121 gcgaagaggc tgtcaacggg gaaactcagc aggcgcattt acaggcgatt aaagagctga
     3181 tagcgcgtga caaaaaccac ccaagcgtgg tgatgtggag tattgccaac gaaccggata
     3241 cccgtccgca aggtgcacga gaatatttcg cgccactggc ggaagcaacg cgtaaactcg
     3301 acccgacgcg tccgatcacc tgcgtcaatg taatgttctg cgacgctcac accgatacca
     3361 tcagcgatct ctttgatgtg ctgtgcctga accgttatta cggatggtat gtccaaagcg
     3421 gcgatttgga aacggcagag aaggtactgg aaaaagaact tctagcctgg caggagaaac
     3481 tgcatcagcc gattatcatc accgaatacg gcgtggatac gttagccggg ctgcactcaa
     3541 tgtacaccga catgtggagt gaagagtatc agtgtgcatg gctggatatg tatcaccgcg
     3601 tctttgatcg cgtcagcgcc ggcgtcggtg aacaggtatg gaatttcgcc gattttgcga
     3661 cctcgcaagg catattgcgc gttggcggta acaagaaggg gagcttcacc cgcgaccgca
     3721 aaccgaagtc ggcggctttt ctgctgcaaa aacgctggac tggcatgaac ttcggtgaaa
     3781 aaccgcagca gggaggcaaa caatgaatca acaactctcc tggcgcacca tcgtcggcta
     3841 cagcctcggt gacgtcgcca ataacttcgc cttcgcaatg ggggcgctct tcctgttgag
     3901 ttactacacc gacgtcgctt gcgtcggtgc cgctgcggcg ggcaccatgc tgttattggt
     3961 gcgggtattc gatgccttcg ccgacgtctt tgccggacga gtggtggaca gtgtgaatac
     4021 ccgctgggga aaattccgcc cgtttttact cttcggtact gcgccgttaa tgatcttcag
     4081 cgtgctggta ttctgggtac cgaccgactg gagccatagc agcaaagtag tgtatgcata
     4141 tttgacctac atgggcctcg ggctttgcta tagcctggtg aatattcctt atggttcact
     4201 tgctaccgcg atgacccaac aaccacaatc ccgcgcccgt ctgggcgcgg ctcgtgggat
     4261 tgccgcttca ttgacctttg tctgcctggc atttctgata gggccgagca ttaagaactc
     4321 cagcccggaa gagatggtgt cggtatacca tttctggacg attgtgctgg cgattgccgg
     4381 aatggtgctt tacttcatct gcttcaaatc gacgcgtgag aatgtggtac gtatcgttgc
     4441 gcagccgtca ttgaagatca gtctgcaaac cctgaaacgg aatcgcccgc tgtttatgtt
     4501 gtgcatcggt gcgctgtgtg tgctgatttc gacctttgcg gtcagcgcct cgtcgttgtt
     4561 ctacgagcgc tatgtgttaa atgataccgg gctgttcact gtgctggtac tggtgcaaaa
     4621 cttggttggt actgtggcat cggcaccgct ggtgccgggg atggtcgcga ggagcggtaa
     4681 aaagaatacc ttcctgattg gcgctttgct gggaacctgc ggttatctgc tattcttctg
     4741 ggtttccgtc tggtcactgc cggtggcgtt ggttgcgttg gccatcgctt caattggtca
     4801 gggcgttact atgactgtga tgtgggcact ggaagctgat accgtagaat acggtgaata
     4861 cctgaccggc gtgcgaattg aagggctcac ctattcacta ttctcattta cccgtaaatg
     4921 cggtcaggca atcggaggtt caattcctgc ctttattttg ggattaagcg gatatatcgc
     4981 caatcaggtg caaacgccgg aagttattat gggcatccgc acatcaattg ccttagtacc
     5041 ttgcggattt atgctactgg cattcgttat tatctggttt tatccgctca cggataaaaa
     5101 attcaaagaa atcgtggttg aaattgataa tcgtaaaaaa gtgcagcagc aattaatcag
     5161 cgatatcact aattaatatt caataaaaat aatcagaaca tcaaaggtgc aactatgaga
     5221 aaaatagtgg ccatggccgt tatttgcctg acggctgcct ctggccttac ctctgcttat
     5281 gcggcgcaac tggctgacga tgaagcggga ctacgcatca gactgaaaaa cgaattgcgc
     5341 agggcggata agcccagtgc tggcgcggga agagatattt acgcatgggt acagagagga
     5401 ttgttcgatt tcaatagtgg ttattattcc aatattattg gcgttgaagg cggggcatat
     5461 tatgtttata aattaggtgc tcgtgctgat atgagtaccc ggtggtatct tgatggtgat
     5521 aaaagttttg gctttgccct gggggcagta aaaataaaac cctgtgaaaa tagcctgctt
     5581 aaattaggtc gcttcgggac ggattatagt tatggtagct taccttatcg tattccgtta
     5641 atggctggca gttcgcaacg tacattaccg acagtttctg aaggagcatt aggttattgg
     5701 gctttaacac caaatattga tctgtgggga atgtggcgtt cacgagtatt tttatggact
     5761 gattcaacaa ccggtattcg tgatgaaggg gtgtataaca gccagacggg aaaatacgat
     5821 aaacatcgcg cacgttcttt tttagccgcc agttggcatg atgataccag tcgctattct
     5881 ctgggggcat cggtacagaa agatgtttcc aatcagatac aaagtattct cgagaaaagc
     5941 ataccgctcg acccgaatta tacgttgaaa ggggagttgc tcggctttta cgcgcagctc
     6001 gaaggtttaa gtcgtaatac cagccagccc aatgaaacgg cgttggttag tggacaattg
     6061 acctggaatg cgccgtgggg aagcgtattt ggcagtggtg gttatttgcg ccatgcaatg
     6121 aatggtgccg tggtggatac cgacattggc tatccctttt cattaagtct tgatcgtaac
     6181 cgtgaaggaa tgcagtcctg gcaattgggc gtcaactatc gtttaacgcc gcaatttaca
     6241 ctgacatttg caccgattgt gactcgcggc tatgaatcca gtaaacgaga tgtgcggatt
     6301 gaaggcacgg gtatcttagg tggtatgaac tatcgggtca gcgaagggcc gttacaaggg
     6361 atgaatttct ttcttgctgc cgataaaggg cgggaaaagc gcgatggcag tacgctgggc
     6421 gatcgcctga attactggga tgtgaaaatg agtattcagt atgactttat gctgaagtaa
     6481 gaaataacgc cggagagaaa aacctccggc gtttcagatt gttgacaaag tgcgcgtttt
     6541 ttatgccgga tgcggcgtaa acgccttatc cagcctacaa aaactcataa attcaaagta
     6601 ttgcaggaaa aggtaggcct gataagcgta gcgcatcagg caatctctgg tttgttttca
     6661 gatgaaaacg ccgaagtgaa aattctccgg cgttttggcc gtgaattact gctgcggaat
     6721 tgccggtaca gccggaacgt taagagctgg catcgcaaac atgccaacaa aatcttctaa
     6781 cgacattttc tgcccattta acgttatctg accgttagta tattgcaggc tggtggtgat
     6841 ggtattgtcc tgcaaggtgg tcagacggaa catctgcccc attgctgatg caccttcaac
     6901 ttgctgtttc gccagttttt tcgcttgatc ttcctgataa ccttccagct tcgctacctg
     6961 agtcataaac tcagttgcca tatccaccgg aatggtcagt ttcgcatcca gagatttaac
     7021 cgaacgatct acttcctgcg ccagcgtttg cggcgcttct ttagtcgttg ccggatcttt
     7081 caggaacagc gacagattca gcgcactttc accctgactg tttttccagc ttagcggcgc
     7141 gacagtaatc accggatcgc ctttcaacat cagcggcagg gcgctaaaga aggcttccgt
     7201 cactttctcc tgataaagtt cgggattgtt ggcaatttct ggctgtgcca gcagcgcctg
     7261 agtttgcgcg ttatattgct ggctgaactg atgccaggct tcaccatcaa tctggccgac
     7321 ttttaaagtc agcttgccgc tgcccagatc ctgattctgt accttcaggc tgtttagcga
     7381 gtaatccagt tggctattga tcgttttacc gtcattgacc agatccgatt taccgctgat
     7441 ctccatgcct tccagcagtg ccagttcttt gccttccact gaaatggtca ttttttccag
     7501 tgacagtttt tggtttccta cgcgctcacc aaaacttgcc agcgtgctgg aaccgtcggt
     7561 tttcagatta ttaaaggtca actgcacttt ctggttgtat tcgttaactg cgtctatccg
     7621 accactttgc gcctccccgg aaagggagat ggctttgccg tctctgtcag catttaactg
     7681 gaactcgccg ccgctaaagg cgactttttc atccttttgc tcgtaattca gtggcttgag
     7741 cgaaatatcg gaactggaat caccgctgta accaatgcgc gagttaatct caaaaggcgt
     7801 ttcacctttt gccatatcaa acagtggttt gcttacttcg ttattaacca gcgtggtttg
     7861 aattgatgcc atcgacggga tcaggttcag ttttttaagc tgggcaagcg ggaagggacc
     7921 atgatcaacc gattcgttga agatgacgct ctgaccgctt ttaatccacg gattttcttt
     7981 cccggcaatg ggtttcacca acagttgcaa ctgactgctg aatacgccgc gatgatagtt
     8041 ttgataactc acttccaggt tggattcagg agctgtcagt tttagttgcg cgttcgcctg
     8101 cgcgaccatg tcttcgagat gggtttcaat cttcttgcct gtataccatg cgccgcctgt
     8161 ccagactacg cctagcgcaa caatgacgcc taccgctacc agcgatttat tcataatgat
     8221 tatccataaa atgaaatcag gcggactggc cgcctgaagg tgttataagc ctttaataag
     8281 cttagcaaga gatgttaatt ttttcagtaa gctcttacag cttgttgtaa acacgcgcta
     8341 aacggccgtg gcctttgaca gtcaccggtg attcgttggc ggcaataaac gctgattcac
     8401 ccggtttaag ctgtaactgc tgagaacctt tccacaacgt tgcatcgcct tcgacgcaga
     8461 acaaaatggc ggcactctgc tggctaatgg tggtttcttt atcactaagg tcatgcagcg
     8521 agaaggcaaa atcatccact ggaatcggga agtccagttc tgcaccttgt ttcaccggct
     8581 gggtcaacaa ctggttagcc ggtttggctt cgaatttcac attggcaacc agttccggaa
     8641 tatcaatgta cttaggcgtc agacccgcac gcagcacgtt atcggagttc gccatcactt
     8701 ccagcgccac gccttgcagg taagcgtgcg gtgtttcagc gaacaggaac atcgcttcgc
     8761 caggattcaa tttcaccaca ttcagtaaca gcggggagaa caggccgctg tcttccgggt
     8821 aaaattcaga aattaaacga atcgtttgcc acggttcacc ctgctgactg tcgagcgccg
     8881 attttaaaat cgccagcgcg cgggattttt cttcaccctg catattcaac aggctggcga
     8941 acagttcgct taaacgttcg gcattaggct gttgtaaaaa gtgagcaatt gccggatgtg
     9001 cacctgcgac tggctggagt agggagacaa tctcggaaaa ctcacgaaac gcgttcatcg
     9061 caaggaaagg cgtcagcgca aaaaccagct ccggcttgtg gttaggatct ttatagttac
     9121 gctcggcggc atccatcggg atacctgcgg cattttcttt ggcaaaaccg atttcagaat
     9181 tgcgtttgtt tggatgaacc tgaatggaga gcggctgtgc tgcgcataat actttgaaca
     9241 ggaaaggcag ttcgccaaag cgtttggcaa cggcctctcc gagcagagtc gatttatcac
     9301 tctcaatcac atcacgcagt gaaacgatat ctccggcggc attctgcact cgtgaactgc
     9361 ttttcggatg tgcgcccatc cacagctcgg ccatcggctg gctggacgga ttttccatac
     9421 cataaagttc agtcaacgcc gttttgctgc cccaggcata gttttgcact gagttaatga
     9481 gtttttgcat gatcaatccc tgttttaatg tggaaattaa tcccactatt aaagcaagaa
     9541 tcctacggga agtaacctgg agccgcaaaa agtcgtacta gtctcagttt ttgttaaaaa
     9601 agtgtgtagg atattgttac tcgcttttaa cagggcaacg gaacacccgc ccagagcata
     9661 accaaaccag gcagtaagtg agagaacaat gtcaaacaaa ccctttcatt atcaggctcc
     9721 ttttccactc aaaaaagatg atactgagta ttacctgcta accagcgaac acgttagcgt
     9781 atctgaattt gaagggcagg agattttgaa agtcgcaccc gaagcgttaa ctctgttggc
     9841 gcgtcaggcg tttcatgatg cgtcatttat gctgcgtccg gctcaccaac aacaggtggc
     9901 cgacattctg cgtgacccgg aagccagcga aaatgataaa tatgtggcgc tgcaattcct
     9961 gcgcaactcc gacatcgcgg cgaaaggtgt tctgccaacc tgtcaggata ccggcactgc
    10021 gattattgtt ggtaaaaaag ggcagcgtgt atggaccggt ggctgtgatg aagcggcgct
    10081 ggcgcgcggt gtctataaca cttatatcga agataatttg cgctactcgc aaaacgcgcc
    10141 gctggatatg tataaagagg tgaataccgg caccaatctg ccagcgcaga tcgatcttta
    10201 tgccgttgat ggcgacgagt acaaattcct ctgtatcgcc aaaggtggtg gttcggcaaa
    10261 caagacgtat ctctatcagg aaaccaaagc gttactaacg ccggggaaac tgaaaaatta
    10321 cctggttgag aagatgcgca cgctgggtac ggcggcctgt cctccgtatc atattgcgtt
    10381 cgtaattggt ggaacttctg cagaaactaa ccttaaaaca gtgaaactgg cttccgctaa
    10441 atactatgac gaactgccaa cggaagggaa tgagcacggt caggcattcc gcgatgtgga
    10501 actggaaaaa gaattgctga tcgaagcgca aaatctcggt ctgggtgcgc agtttggtgg
    10561 taaatacttc gctcacgaca tacgcgtgat tcgcctgcca cgtcacggcg catcctgtcc
    10621 ggttggtatg ggtgtttcct gctctgctga ccgtaatatc aaagcgaaga tcaaccgtca
    10681 ggggatctgg atcgaaaaac tggaacataa tccaggtaaa tatatccctg aagagctgcg
    10741 taaagcggga gaaggcgaag cggtgcgcgt tgaccttaac cgtccgatga aagagatcct
    10801 cgcacagttg tcgcagtatc ccgtttctac acgcttatcg cttaacggca cgattatcgt
    10861 cggtcgtgat attgctcacg ccaaactgaa agagcggatg gataacggtg aagggctgcc
    10921 gcagtacatt aaagatcatc cgatttacta cgcgggtccg gccaaaacgc cggaaggtta
    10981 tgcctccggt tctcttggcc caacgaccgc cggacggatg gattcttatg tcgatcaact
    11041 gcaagcgcag ggcggaagta tgatcatgct ggcgaaaggc aaccgcagcc agcaggtgac
    11101 ggatgcctgt aaaaaacacg gcggcttcta ccttggcagt atcggtggtc cggccgctgt
    11161 attggcgcag ggaagtatta agagcctgga atgtgttgaa tatccggaac tgggaatgga
    11221 agccatctgg aaaattgaag tggaagattt cccggcgttt atccttgtgg atgataaagg
    11281 aaatgacttc ttccagcaga tacaactcac acagtgcact cgctgtgtga aataaacaga
    11341 gccgcccttc ggggcggttt ttttacatgg cacgaaagac caaacacttg ttatcaaata
    11401 gtaaataata agtgagctaa aagttgctta gcgaaagcaa aacagaaaga aaaaattaaa
    11461 caggtgagga gcaggccatg aatacagtac gcagcgaaaa agattcgatg ggggcgattg
    11521 atgtcccggc agataagctg tggggcgcac aaactcaacg ctcgctggag catttccgca
    11581 tttcgacgga gaaaatgccc acctcactga ttcatgcgct ggcgctaacc aagcgcgcag
    11641 cggcaaaagt taatgaagat ttaggcttgt tgtctgaaga gaaagcgagc gccattcggc
    11701 aggcggcgga tgaagtactg gcaggacagc atgacgacga attcccgctg gctatctggc
    11761 agaccggctc cggcacgcaa agtaacatga acatgaacga agtgctggct aaccgggcca
    11821 gtgaattact cggcggcgtg cgcgggatgg aacgtaaagt tcaccctaac gacgacgtga
    11881 acaaaagcca aagttccaac gatgtctttc cgacggcgat gcacgttgcg gcgctgctgg
    11941 cgctgcgcaa gcaactcatt ccgcagctta aaaccctgac gcagacactg agtgaaaaat
    12001 cgcgtgcatt tgccgatatc gtcaaaatcg gtcgaaccca cttgcaggac gccacgccgc
    12061 taacactagg gcaggagatt tccggctggg tagcgatgct cgagcataat ctcaaacata
    12121 tcgaatacag cctgcctcac gtagcggaac tggctcttgg cggtacagcg gtgggtactg
    12181 gactaaatac ccatccggag tatgcgcgtc gcgtagcaga tgaactggca gtcattacct
    12241 gtgcaccgtt tgttaccgcg ccgaacaaat ttgaagcgct tgcgacctgt gatgccctgg
    12301 ttcaggcgca cggcgcgttg aaagggttgg ctgcgtcact gatgaaaatc gccaatgatg
    12361 tccgctggct ggcctctggc ccgcgctgcg gaattggtga aatctcaatc ccggaaaatg
    12421 agccgggcag ctcaatcatg ccggggaaag tgaacccaac ccagtgtgaa gcattaacca
    12481 tgctctgctg tcaggtaatg gggaacgacg tggcgatcaa catgggtggc gcttccggta
    12541 actttgaact gaacgtcttc cgtccgatgg tgatccataa tttcctgcaa tcggtgcgct
    12601 tgctggcaga tggcatggaa agttttaaca aacactgcgc agtgggtatt gaaccgaatc
    12661 gtgagcgaat caatcaatta ctcaatgaat cgctgatgct ggtgactgcg cttaacaccc
    12721 acattggtta tgacaaagcc gcggagatcg ccaaaaaagc gcataaagaa gggctgacct
    12781 taaaagctgc ggcccttgcg ctggggtatc ttagcgaagc cgagtttgac agctgggtac
    12841 ggccagaaca gatggtcggc agtatgaaag ccgggcgtta atctgcaaca tacaggtgca
    12901 gccgtggaat gatcaaacga agcggctgcg cctgaggttt ataacggtgc tgcacattgt
    12961 cggcatcgta atttaacaac tcaccaacgt ccggcacgcc cgcaccatta tcccgattaa
    13021 tcagtgcaat cagcggtgta gggcaggcgt gttgcacttg tttttgatct cctttgtacc
    13081 agacgcgggc aatcggctgc accttcaccg gacgtttgat ttttaacttc gcgttctgtg
    13141 gcagggcagc gatatcctga tactctcgct ccagttttct ttgccactcc tcgcgcgtcc
    13201 acggtgcgac actgcgtggt gatttcaggc ttttttccag ctgtgccagg acttcatcac
    13261 gatgcaaatt tttaatgata tgtttattag cccagccaaa acgtaaagtg gcggggtcgt
    13321 gcagaacggt gagcgagcgg taagcattaa gggtgatcag ccccggcaaa tgacgatgca
    13381 cccattcaaa acgtgccgcg gtggggagtt ctgactcaac cgtgacgata tgctcgaacg
    13441 tggtcttgag tttattgatg tgctgaatat gactgaccaa cgctgcttgc gaaaggttat
    13501 cgacctggta acacaacacg ccaggcagac ggacagcggc tttgctgctg cgattttcgg
    13561 actgttgttg aataaataaa tggcggaaat gacgcaacgc cagcgactgc gcgtcgttgc
    13621 cgagatgttg tttcacctca atacgattaa gcggattatg ctcatcctct ttttttacct
    13681 ccggcaaaga gaacacgcgg gcaaccaata gcttgtgttg ctcaagatga gcggcaaatg
    13741 cagccagctc ttgttccatc tggcgaaagg tagtgttgag tcggtctacg agatcgtaac
    13801 gcgccataat attaaccact ttagttacaa catccttaat ttatagcaca atggtggtga
    13861 cttgaccatc gtgcgcgtag tgtcaggcag aggtaaattg cgggatgtta tgccataacg
    13921 gccagctaaa cgagaagcga gcaccaccca gttcgctggt gtcacaatta accgtaccgc
    13981 ccattgccag tgctatagag tggacaattg ccagccccag cccgcagccg ccggttgagc
    14041 gatcccggct gggatcgagg cgaacaaaag gttcaaagat atgttcgcgg ttttctgggg
    14101 caatccctgg gccatcatcc tcaacaatta atgtcgctct attccccgac agtagcaggc
    14161 tggtttcaac cgttgaatgg cagtaccgca gggcgttatt gagcaaatta tccagcacgc
    14221 gctccattaa gcgcatatcc aacgccgcat aatggccttg cacgagcgtt tttatccgta
    14281 ccgttttatc gggcgttact gcctgaatat ctgccagatg cgttgacagc cacaacggca
    14341 ggtctggttc gctaagatga agctcgtttt gtgggcgatc gagtcgggca taagtcagca
    14401 gctcttcaat taaagcttca agttgactga tatcacgatt caacgcctgg gactcggcgg
    14461 cgctcaggtt atcgctcatc tccagtcgat aacgcaggcg cactaacggt gttcgcagtt
    14521 cgtgagcgat accgtcaata agctgttttt tgctggcaat caaggcgttg atattgtccg
    14581 ccatctggtt aaatgcgata ccaagtcgtt caaagctcga accctcatca aagtggatac
    14641 gctcatagag atgcccatcg ccaaatcgtt gcgccgctgc ttccagtttt aacatatcct
    14701 gccagtgcgg acgcatccag ataaacaccg gaaaggcgag ggaaatagca ataaaagcga
    14761 tcagggcgat atccagcaat cgcatctgat ggagataata aagataagga acaggaccaa
    14821 ctgccagcac gtagtggctg cgcgggatac gctgcaaaaa cgtgtactga tcgtccaggg
    14881 cgacaatttc gccgccacgc agtcggtgca tggaaatatc atcaagatgg tatttactca
    14941 gtggctcgac acgcagatcg aaagagagat ttaaatccat ctctttcagc gtcttacccc
    15001 agtcgtgtgg ggggatctca cgcaattcgc tgcgcatcag atacagcgaa ctgttcatca
    15061 aatcatccag cgactgtttg cccgcgcgtt cggcggtaaa tttgtacacc aacccaacca
    15121 gcagagacat cacaaggaag cagacaaaca ataacaggta aaactggata aacagttttt
    15181 tcatcgctta ttcccatgca tgaggcgcaa aaagatagcc tttgttacgc acagttttaa
    15241 tgcgataagg ttctgcggcg ttatcgagca gtttttttct taaccgcgaa atagccacgt
    15301 ccacgttacg atccagtccg tcataactga cgccgcgtaa atttttcagc aatgcatcgc
    15361 ggtccatgat ttgcccggca tgggtagcta attcccacaa taattcgaaa tcagctgtcg
    15421 agagcgagat ttcagtgtta gccagggtga ctacgcggtt gatgggatcg atggtcaacg
    15481 tgccgaaatg cagggctttg tagggagtca gagacgtttc ctgaagacct ttggtcagtg
    15541 tggcttgctc attctgacgc aaatgcaaac gtaaacgcgc tagcaaaaca gcagggggca
    15601 tcgttttgag aatatagtcg caggcaccca tttccagtgc caggatgtgg ttcatatcgc
    15661 tatcgagaga ggttagaaga acaatcggtc cagaccactt tgcgcgtaaa tcacgacaaa
    15721 tggtaatgcc gtccttgcct ggtagcatga tgtcgagtaa caccaaatcc ggattttctc
    15781 gcaaaatggt ttcttcggcc tggtcgccgc gcggctctac ggtaacctgc atatcatgtt
    15841 ttgccaggta cgcggcaatc agtgaaccga cttccgcatc atcttccaca aatacgatag
    15901 tgttcataac attcacggta gatataaaaa cgtcacaata caccgcgctg tttttactta
    15961 ctatcaatcg tttctaaaca agttttcatc aggtattcta ctgatgactt gttatggaag
    16021 tgttaaggta aaatcaaagc cgcgctcggt gtgctggtag tgctgttgat tggtgtttta
    16081 gcaaaaacga aaaattatta tatcgccggg ctgattccac ttttcccgac ctttgcgctt
    16141 atcgcgcatt atattgttgc cagcgaacgc ggcattgaag ccttacgcgc aaccatcatt
    16201 tttagtatgt ggtcgattat tccctatttt gtttacctgg tgtcgctgtg gtatttcacc
    16261 ggaatgatgc gcttgcccgc cgcttttgtt ggttctgttg cgtgttgggg gataagcgca
    16321 tgggtgttga ttatatgctg gataaagctg cattaacgca gatgacgacc gccatcaagt
    16381 gggaaactgc gtccggtgac aaagcaactg gtaagtaagt aatcgaccag gtcgatcact
    16441 tctttctcgc caggcgcggt tttcatcagt gatttattca gcgcctgttg tcgatattcg
    16501 gcatcatcat gttcattaaa caggatcagc gatggagcaa tagaattcac tttcacttcc
    16561 ggtgccagct tgcgggcaaa cgagcgggtc atattatcca gtgccgcttt gcttgcagca
    16621 tacgcaatat gcttgtcgct accgcgctcc accacataat cggtaaagtg aatgatatcg
    16681 ctggcggcgt gtccgtgccc acgcagtaat ctttccagcg catggttgag caggtatggg
    16741 gtattaacgt ggatctgcat catgcaagcc agtacgtcgg ccagtggcgc acccagtttt
    16801 tccgccatcc acgcactggc gttatgcaaa atagcacgca gaccatgggt gctttttagt
    16861 acttcatcgg caaacgccat cacaccgtcg ttggtcgaaa aatcagcctg aatacactgc
    16921 gcacctgcct taatcagtcc atcaatggct ggatagtgcg tccgatagct gacaatcacc
    16981 ggttgctttt gattaatgaa atgccaggcg agggcgaggc cgatgcgacg acctccgcca
    17041 gtaattaata ttggcaaggg ctgggcttta cccatcgtta tctcctttgc tatccaacga
    17101 tgggatgaac gttatcccac cagcatccag gtcgccggaa ctgaggcaat taacagcatg
    17161 ccaatcagca ccatttcctg acggttcagt acattatcat gtgtatgcgt tttgcgcgca
    17221 tacaggaaaa ccagcagccc cggcgcatac agaacaacgg ataacagcaa gtgcattgga
    17281 ccagaggcgt acaataacca taagccataa atgcaggcac cgacacctac cgctttatgc
    17341 agtggacggg ttgcgatttt cagcaagaac gcgccgacca ggaaataggg caccagaatc
    17401 atttctgagg cgatggtcag caacgtgttg taatcggaac cggtcagcca gatgagtacc
    17461 agacaaattt gcacgcagat gttggtcaac cacagtgagg cggatggcgc agcttgtgcg
    17521 ttctggcgcg caaaaatgcg tgggaatgct ttatgagtgg cagccaggaa cggaacttct
    17581 gccgccatga tggtccagct taagtacgcg ccgcaaacgg aaacgatcaa actggcagcg
    17641 atgatgattt cgccccatgg tcccatcatt tccaccatca gaccggccat tgacgggtta
    17701 cgaatttcag ccagttcagg acgtgccacc acacccagcg aaagcagcgt taccagcaag
    17761 taaacgccca gagcggagag aaccgccagc agtgtcgctt tgccaacatc acgtttatta
    17821 cgcgcacgcg cagaaacaac cacggcacct tccacaccaa tgaaaaccca cagggtgatc
    17881 agcatggtgt ttttcacctg ttcccaaacg ggtacgccaa gtacaagtcc ggtgaagtcg
    17941 agcttgaagg tatccagttt gaacatcatc atcgccagca caacaaacag acccagcggc
    18001 aacaattttg ccagtgtcgc caccaggtta atgctggcag cggtttgcac cccgcgcagg
    18061 atcaaaaagt gaacaatcca caataaagcc gatgcaccga cgatcgattg ccaggtatta
    18121 ccatcgccga acaggcgcaa ttccggcgtg tccgtaaaaa agcttaacgc ggaaaaaacg
    18181 atcaccagat aggagacgtt ggcgatgact gcgcacagcc agtatcccca tgcggaacaa
    18241 aagccgatta gctcgccaaa cccttcgcgg gcataggtaa agataccgcc gtcaagttcg
    18301 ggacgaatgc gcgtgaggat cagcatggca aaggccagca ataaaatgcc agcgccagta
    18361 ataccccagc cgatgagcag tgctgccggg ctggcaactg ccgccatatt ttgcggcaga
    18421 ctgaaaacac ccgcgcccag cattgagctt aataccagcg cggtgagtgc gctcagtccc
    18481 agtttctttt ccatcgatat ccagtgatta aaacgtgata agaagaataa atattagggc
    18541 aaaacgcata aaaatggagt ttgccactga agcgcgggat tttacgaaga gatgtgtctg
    18601 catgcaatgg tcgcggggaa atttgtgact aaaaatgcga aaggcggcat caagccgcct
    18661 tataggagta actgaatagt tatttataca gatctgcgct gacggtcagg ttattaccac
    18721 gttcctgcca ctggcgggtg atgtggtaat acttagcacc tttcttcgcg gcacgtttcg
    18781 caacctgata ggagacttcg gtcatgttgc cgtagttgcc agagaatttg atgctatcga
    18841 acgggaccat catcgctgcg gtcgctttgt tcagttcttc gactttagtg ccatccggga
    18901 gcgtgacggt gtaacgcccg ccttttgatg actgggtttc aaagaaacga ccgacttcag
    18961 aacttggtga tgcggtagtc gcaacacctg ggatctcaac tttcttcgcg gcttcgccac
    19021 cggcagccag agctgcacgt cctgcttcgg aatctgccgg gatcacatcc gggctctgga
    19081 cgatacgttt cttagcatct tttttataga tgaatgcagt aatacgctgg ttgccgccct
    19141 ggttggcatc gatttgacga acgatgtaga aagagtaggc acctttcgct tttgccgctt
    19201 tggtgatggc atcattgact tctggctggc tacgatagaa gccctggacg gtgaccgtgt
    19261 caaacggttc aatcagaaca gcctgatctt tcggcagttc gacaacaccg ttaattacgc
    19321 gattacttgt ttcttctgct ttttcagcat cggctttata gaggtcagcg accacacgcc
    19381 agttaccgct gttaccaaaa tcagaagtgt cgacaacata aaaagaggcg gcaccttctt
    19441 tatctgcgcg acgagaaacg gctttcaccg cttcgccaat agcattaaaa cgaccggtaa
    19501 ccactacacg gtcaaaaggt ttaaccgctg ccgcttgctc cggtgtcagt tctgttgctg
    19561 cgttaacgga gaatgccgta gcagaaagca gtgccgacgc caggagggtg ttcttaagct
    19621 tcataaaata atccttcgcc ttgcgcaaac caggtactgg tattgttatt aacgagaaac
    19681 gtggctgatt attgcattta aacggtgtaa ctgtctgcgt catttttcat atcacattcc
    19741 ttaagccaat tttaatcctg ctcaaatgac cgtctatgct taaaaaacag ccgtatcagc
    19801 atcattacta ctgaagcaac tgaattgtat aagttaattt aatgttaagt agtgaatcgt
    19861 gccggggcga tgtctcgttt tacccgaccg tcgaagacaa ttatcagtct ttatccggcg
    19921 ttctaaggtg tttatcccac tatcacggct gaatcgttaa tattttgcga gttcacgccg
    19981 aaatactgat ttttggcgct agatcacagg tataattttc agtacgttat agggcgtttg
    20041 ttactaattt attttaacgg agtaacattt agctcgtaca tgagcggctt gtgtggctcc
    20101 tgacacaggc aaaccatcat caataaaacc gatggaaggg aatatcatgc gaattggcat
    20161 accaagagaa cggttaacca atgaaacccg tgttgcagca acgccaaaaa cagtggaaca
    20221 gctgctgaaa ctgggtttta ccgtcgcggt agagagcggc gcgggtcaac tggcaagttt
    20281 tgacgataaa gcgtttgtgc aagcgggcgc tgaaattgta gaagggaata gcgtctggca
    20341 gtcagagatc attctgaagg tcaatgcgcc gttagatgat gaaattgcgt tactgaatcc
    20401 tgggacaacg ctggtgagtt ttatctggcc tgcgcagaat ccggaattaa tgcaaaaact
    20461 tgcggaacgt aacgtgaccg tgatggcgat ggattctgtg ccgcgtatct cacgcgcaca
    20521 atcgctggac gcactaagct cgatggcgaa catcgccggt tatcgcgcca ttgttgaagc
    20581 ggcacatgaa tttgggcgct tctttaccgg gcaaattact gcggccggga aagtgccacc
    20641 ggcaaaagtg atggtgattg gtgcgggtgt tgcaggtctg gccgccattg gcgcagcaaa
    20701 cagtctcggc gcgattgtgc gtgcattcga cacccgtccg gaagtgaaag aacaagttca
    20761 aagtatgggc gcggaattcc tcgagctgga ttttaaagag gaagcgggca gcggcgatgg
    20821 ctatgccaaa gtgatgtcgg acgcgttcat taaagcagaa atggaactct ttgccgccca
    20881 ggcaaaagag gtcgatatca ttgtcaccac cgcgcttatt ccaggcaaac cagcgccgaa
    20941 gctaattacc cgtgaaatgg ttgactccat gaagacgggc agtgtgattg tcgacctggc
    21001 agcccaaaac ggtggcaact gtgaatacac cgtgccgggt gaaatcttca ctacggaaaa
    21061 tggtgtcaaa gtgattggtt ataccgatct tccgggccgt ctgccgacgc aatcctcgca
    21121 gctttacggt actaacctcg ttaatctgct gaaactgttg tgcaaagaga aagacggcaa
    21181 tatcactgtt gattttgatg atgtggtgat tcgccgcgtg accgtgatcc gtgcgggcga
    21241 aattacctgg ccggcaccgc cgattcaggt atcagctcag ccgcaggcgg cacaaaaagc
    21301 ggcaccggaa gtgaaaactg aggaaaaatg tgcctgctca ccgtggcgta aatacgcgtt
    21361 gatggcgctg gcaatcatcc ttttcggttg gctggcaagc gttgcgccga aagagtttct
    21421 tgggcacttc accgttttcg cgctggcctg cgttgtcggt tattacgtgg tgtggaatgt
    21481 atcgcacgcg ctgcatacac cgttgatgtc ggtcaccaac gcgatttcag ggattattgt
    21541 tgtcggagca ctgttgcaga ttggccaggg cggctgggtt agcttcctta gttttatcgc
    21601 ggtgcttata gccagcatta atattttcgg tggcttcacc gtgactcagc gcatgctgaa
    21661 aatgttccgc aaaaattaag gggtaacata tgtctggagg attagttaca gctgcataca
    21721 ttgttgccgc gatcctgttt atcttcagtc tggccggtct ttcgaaacat gaaacgtctc
    21781 gccagggtaa caacttcggt atcgcaggga tggcgattgc gttaatcgca accatttttg
    21841 gaccggatac gggtaatgtt ggctggatct tgctggcgat ggtcattggt ggggcaattg
    21901 gtatccgtct ggcgaagaaa gttgaaatga ccgaaatgcc agaactggtg gcgatcctgc
    21961 acagcttcgt gggtctggcg gcagtgctgg ttggctttaa cagctatctg catcatgacg
    22021 cgggaatggc accgattctg gtcaatattc acctgacgga agtgttcctc ggtatcttca
    22081 tcggggcggt aacgttcacg ggttcggtgg tggcgttcgg caaactgtgt ggcaagattt
    22141 cgtctaaacc gttgatgctg ccaaaccgtc acaaaatgaa cctggcggct ctggtcgttt
    22201 ccttcctgct gctgattgta tttgttcgca cggacagcgt cggcctgcaa gtgctggcat
    22261 tgctaataat gaccgccatt gcgctggtat tcggctggca tttagtcgcc tccatcggtg
    22321 gtgcagatat gccagtggtg gtgtcgatgc tgaactcgta ctccggctgg gcggctgcgg
    22381 ctgcgggctt tatgctcagc aacgacctgc tgattgtgac cggtgcgctg gtcggttctt
    22441 cgggggctat cctttcttac attatgtgta aggcgatgaa ccgttccttt atcagcgtta
    22501 ttgcgggtgg tttcggcacc gacggctctt ctactggcga tgatcaggaa gtgggcgagc
    22561 accgcgaaat caccgcagaa gagacagcgg aactgctgaa aaactcccat tcagtgatca
    22621 ttactccggg gtacggcatg gcagtcgcgc aggcgcaata tcctgtcgct gaaattaccg
    22681 agaaactgcg cgctcgtggt atcaacgtgc gtttcggtat ccacccggtt gcggggcgtt
    22741 tgcctggaca tatgaacgta ttgctggctg aagcaaaagt accgtatgac atcgtgctgg
    22801 aaatggacga gatcaacgat gactttgctg ataccgatac cgtactggtg attggtgcta
    22861 acgatacggt taacccggcg gcgcaggatg atccgaagag tcctattgct ggtatgcctg
    22921 tgctggaagt gtggaaagcg caggacgtga ttgtctttaa acgttcgatg aacactggct
    22981 atgctggtgt gcaaaacccg ctgttcttca aggaaaacac ccacatgctg tttggtgacg
    23041 ccaaagccag cgtggatgca atcctgaaag ctctgtaacc ctgacggcct ctgcggaggc
    23101 cgtcactctt tattgagatc gcttaacaga acggcgatgc tttgacctcc cgctgtttgt
    23161 tcaagcgcaa ttttgacaat aattgttaac ggcacggaaa gcagcatacc caccggtcct
    23221 aacaaccatc cccaaaaaat caacgacaaa aataccacca atgtggaaag ccccagccca
    23281 cgtcccatga tgcgcggctc cagaatattg ccgaagacca gattaatcag cagatatccc
    23341 gccagcacca gcaacgcttc gtagaagcca ttaaacacca gtacctgagc gatagggggg
    23401 attgccgcga gaactgaacc aatattaggg atgtaattaa gcgcaaaggc cagcaatccc
    23461 cagacaaaag cgaagcgaac atcgagtgcg gcgagcatcg cccaggcgac caggccggtg
    23521 atgatgctga tggctgtttt cagcaccaga taatgagaaa cactgtcaat tgcacgttga
    23581 atcgccgcca tcccttcaac cggacgcgcc atcatttgct gaaattttcc gggcaattgt
    23641 ggcacttcga gcagcataaa cagcaccgtc agcagcaata aaaatattga taacatggca
    23701 ttagataact gcgtcaataa gttggtgagc aacgtcatcg ctgcgttcgg atcaatgtaa
    23761 tgcgccagct ggtcaactga gacgtcaatc cctacgcgtt gcaacaacgg ctcaagagct
    23821 tgcagcggcg tcataataga gttgcgatat tgcggtaacg tccgcgtcaa ctcgttgagc
    23881 gcggaaccca gataagctaa tagcaacacc atcgccatca cgatgatggt catcaaaatc
    23941 gacaccgcca gtacacgcgg cactcgccag cggaccatgt gttgcaccag cgggttaaga
    24001 ataacagcat tttatcattt agtgtttttt gctgttttat aatgtttcag gctgtgcatt
    24061 atgtttttga ttatcaacag atttgtgatt ctccttgttc cagcttgttt cacgttgtag
    24121 ccctttgtgc aacgatcggt gtagtcactg gtgtagtcac tttttcgtaa agagggggta
    24181 aaacgtgagc agagcaatga acaaactgag cgataccttg ctaaggaaac ttcatggtaa
    24241 gccagcggag aaaaacacgt tttatagtga tggcggaaac ctgagcgtga aatatttaac
    24301 atcagggaaa ttgacctggt atttcatata cagggccgga acgggaaggg agacacgacc
    24361 cgaacgcatt aagctgggaa gttatcctga tctgagcctg aaatcagcca gggaaaaagc
    24421 cgcccagtgt cgcgcatggc tggcagaggg gaaaaatcca cgtcatgagc ttaattacac
    24481 cgtacaggaa gcgttaaagc cggtaacggt tggcgatgcg ctcacctact ggcttgagta
    24541 ttacgtaaag gaaaaccgcg tggattatat cgccctgaaa aggcgactta ataatcacgt
    24601 aatacagcag attggtgcta tgccgctgga taaatgcgag ctacggcact ggctggcctg
    24661 ttttgaccag gtggcaaagc gaacgcctgt tactgccgga ttcgtgctac aggcgtgcaa
    24721 acaggcgctt aagttctgcc gtaggcggcg ctatgcaatc agcaacgttc tggacgatct
    24781 gaacgtggcg gacgttggga aaaaaccgga tataagcgaa cgtgtcttaa gtaacaaaga
    24841 acttggcgaa ttattgcagg cactggacaa aaaaatattc tccccttact acgtcgcgtt
    24901 aatccgcctc ctgattgtct tcggagccag aacggtagaa ctgaggttat cggagatcgg
    24961 ggagtgggat tttacggaaa tgctatggac cgttccgaag gagcacagca aaacgaaggt
    25021 cgcaatattc cggcccatac cggaagcgat cctgccgttc gtcacgcagc tggtggagca
    25081 gaacaggcac acgggcttat tgctggggga agtgaaacag gaggccagcg tatcgcagta
    25141 tggaagatta gcgcacagga ggcttaatca tcctcactgg tcactgcatg acatccggcg
    25201 cacctttaca accatgctga acgatttagg cgttgatccg catgtcgtgg agcagcttac
    25261 aggccaccag atgccaggaa tgcagcgagt ttataatcat tcccgttatc tggatgctaa
    25321 acgcaatgcg ctggatatgt ggacggagcg gttagggata ctggcgggaa cacatgaaaa
    25381 cgtaaccacg ctaccagtag ccagaagaaa ataatttttt tcgtgttttt tcagtatgcg
    25441 catactgtat atgcgaacag atacaacgtg caacaatgag caacaatgtg gaacaaccac
    25501 gaacaagagg cgaaaaagca tacagattta taagtggctg atttttaatg tgtcactggt
    25561 tttttataca ctagcgaatc actctttaaa gagcgagaaa aaaggcatga aacaatattt
    25621 tatgcctttg tattaacatg aatttaaaag attttattct tactgtttca ttttctgtaa
    25681 atcatacatc ctcaatattt gccattcatc actctagcgg gaacaatacg acacaataag
    25741 acacctgatg actctttaag aaacgaaagg gggggcaata gtgttaagca ctgatcggtt
    25801 tatacgtgaa aaagaatgcg aaaaactaac cggccttagc cgtacgtgtc gctaccgcct
    25861 ggaaaaggcc ggacaattcc catcacgtcg taaacttggc ggtcgttccg ttggctggtc
    25921 tttatccgag gttctggcct ggaaggatag ctgcaaggca gttcattaat cacgctggcg
    25981 gcacgcagcc gccacacatc aatcatctga acacagagct ataaccatga agattgaata
    26041 tacgccagaa cgtgggcggg gattcgttcg ccctggtgaa actgaaaaac aacaaaattg
    26101 gggtttttca ggtataaaaa aagcggcccc gaaatggagc cgcctttctg aacagataac
    26161 ccgctgcgcc gtttgtgtgt gtgatcccaa acataagcac ggggatgata gccgctatca
    26221 ggctggtggg caatgcaatc agtctggttc agttcgttgc catacctgca atgagcgctt
    26281 ttccctgtac tctttaagga attgctcaag ggcaaaagca catggcgcga atctttctga
    26341 ttcatgctct atctttctgc gccgtctttt ccgtgccggt gataatgttt tggtcaattc
    26401 tttatcggtc attgtgttgt cctgcatagc aatgcgccgt aataccttac accacggcgc
    26461 tgatggtgat tactctggtt ctttggcctt gcgccgctgg cgatattcaa cttctcgttt
    26521 taatgccgca gtaacaaatt gccccgtact ttcgccaggc atttttaccg cctcaacatt
    26581 gttcataact tcatgcggaa cccttgccgc aacggtttgt gattttgcgt ttactgcttt
    26641 tgtcgccatg tggtgtaccc ctcataaaaa acaaatgcag tatgcaggaa aaaaaataag
    26701 tgttcaacac ttgacgtgtt taacacctgg gtttaaattg gtgttcaaca ccttgttggc
    26761 gcaaggtgca gaaacgacga aacccggcag tgcgctaaca ctaaccgggc ttctaaccac
    26821 caacgatagc gaaagtatcg aggtagctat gagaaatcat accatacacc cgcaagggcg
    26881 ggactcgcac aacctgaata aatacatctg gcgttttatc gccctgagca cggcacaacc
    26941 gcgcgtgatt accattgagg ccaccagcga acaggaagca cgccagcaat ctccggctgg
    27001 ctgcgtgatg gtatttgctg cccgtattcg tcagggggta ggcttatgag ccaggaaatc
    27061 acactacaac aggcagcaga acgcgcccac caaatcgaag ttatttgcgc actggcagag
    27121 gattaccctg gcatgatgac cgacagcgaa tcaggggcaa tcatcggctt acttaaacgc
    27181 cttagcggtg aggtctgcgt attcctgagc gatgaacagg aaagaagaac gcttatttct
    27241 aacgaaaaaa aatgcggagg ggtacatgtg caataaaacc acaccggacg cagccgccgc
    27301 cgcgctcact acgctgatgc acgcgcttat tgatatttct gttattgctg acagggcgca
    27361 taaacacgca gccagagaat cagaatgcat cttccattat ttaacatttg tgcagctaaa
    27421 agccgatcag gcactggata aggccggaaa aattatcatg gctgatgtgc aggaggtgca
    27481 ccatgcataa cctgtcaatt tctgacctta acagcattca gtttgacgag aaatttaccg
    27541 ggcagttgct ggtcaatgtg gagaacgggc gcatagtgcg taattatcac ctgccggatg
    27601 gtgcaattgc cggaagcgtt gaagcattgc tggaactggc ggaacgtgcg cgactgatta
    27661 agccgtcaac gagccatcac gatgatgatc tgcattttac cggatgtatg gtgagtcact
    27721 acgaaaacgg cgtcgaggta tcctgcgaac ggctgcgtga tgattgctgt ttcggcacac
    27781 tgccggaatt tatcgagttg ttgaccagtt gcggttatca ggtcattcag ggggtaaaca
    27841 tgcgtgatga tcgttttaat tccctgaaac aggaattttc cggcgttcct gatgatgcgg
    27901 ctgatgcgct ttcgtcaatg ccagagctta ttagagcggc ttttttctta ctttccacga
    27961 gagaatataa atcaacgggg cttgatgtac tgaatatcgt cgccgattat gctgatttcg
    28021 tgacagaggt tattttaaga aaaacgacgg acggggatta atatgcgtga tatttacctt
    28081 gaaacaatag accgcgcatt tcttgcactt tctcacagtg aaaacatgct ggaaatatt
//
LOCUS       DAJVUK010000037        27840 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.037, whole genome shotgun sequence.
ACCESSION   DAJVUK010000037 DAJVUK010000000
VERSION     DAJVUK010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27840
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.037"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..527
                     /locus_tag="OQQ57_001518"
     CDS             <1..527
                     /locus_tag="OQQ57_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HCS1956328.1"
                     /translation="KYKIMANHHGIIFDEQRKRYIIGSITVSIDEMTNALDPVELAEI
                     INKKHHAVINGKKFKNSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHN
                     GNGGRECIGETGTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRN
                     GLMPLIRRRTMLQL"
     gene            893..1960
                     /locus_tag="OQQ57_001519"
     CDS             893..1960
                     /locus_tag="OQQ57_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCS1956329.1"
                     /translation="MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIE
                     ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
                     AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISAQQLDDDRAAA
                     ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
                     DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
                     DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
                     AWVRVNEELPWPDDLVVRLPQ"
     gene            1957..4692
                     /gene="rbbA"
                     /locus_tag="OQQ57_001520"
     CDS             1957..4692
                     /gene="rbbA"
                     /locus_tag="OQQ57_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HCS1956330.1"
                     /translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
                     GPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
                     VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
                     IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
                     LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
                     ERFKLNDVEDVLPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
                     AYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
                     GTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
                     DRRMSAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
                     QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSTLSVVR
                     EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
                     TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
                     WIGEVYPTSHFLTIARGTFSKALDLTDMWQLFIPLLIAIPLVMGLSILLLKKQEG"
     gene            4692..5816
                     /locus_tag="OQQ57_001521"
     CDS             4692..5816
                     /locus_tag="OQQ57_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709253.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1956331.1"
                     /translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
                     GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
                     PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
                     LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
                     EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
                     MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
                     LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
     gene            5889..6164
                     /locus_tag="OQQ57_001522"
     CDS             5889..6164
                     /locus_tag="OQQ57_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HCS1956332.1"
                     /translation="MRTKVQALRKKQKNTLDQIFKTPVPQGIKWSDIESLVKALGGEI
                     KEGRGSRCKFILNMSVACFHRPHPSPDTDKGAVESVRDWLLSIGVKP"
     gene            6161..6520
                     /locus_tag="OQQ57_001523"
     CDS             6161..6520
                     /locus_tag="OQQ57_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HCS1956333.1"
                     /translation="MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSD
                     SIQGLQKEGELSLLEYLEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQV
                     SVNTYIIETLNERLNHL"
     gene            complement(6640..7041)
                     /gene="nikR"
                     /locus_tag="OQQ57_001524"
     CDS             complement(6640..7041)
                     /gene="nikR"
                     /locus_tag="OQQ57_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HCS1956334.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(7047..7853)
                     /gene="nikE"
                     /locus_tag="OQQ57_001525"
     CDS             complement(7047..7853)
                     /gene="nikE"
                     /locus_tag="OQQ57_001525"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HCS1956335.1"
                     /translation="MTLLNVSGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWRGESLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDETVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQAVGDKLTFSSDAGRVLQNAVLPAFPVRRRATEKV"
     gene            complement(7850..8614)
                     /gene="nikD"
                     /locus_tag="OQQ57_001526"
     CDS             complement(7850..8614)
                     /gene="nikD"
                     /locus_tag="OQQ57_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HCS1956336.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKAVYPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
     gene            complement(8614..9447)
                     /gene="nikC"
                     /locus_tag="OQQ57_001527"
     CDS             complement(8614..9447)
                     /gene="nikC"
                     /locus_tag="OQQ57_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HCS1956337.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSH
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVSGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
                     H"
     gene            complement(9444..10388)
                     /gene="nikB"
                     /locus_tag="OQQ57_001528"
     CDS             complement(9444..10388)
                     /gene="nikB"
                     /locus_tag="OQQ57_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HCS1956338.1"
                     /translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQCFTLMMAVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            complement(10388..11962)
                     /gene="nikA"
                     /locus_tag="OQQ57_001529"
     CDS             complement(10388..11962)
                     /gene="nikA"
                     /locus_tag="OQQ57_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HCS1956339.1"
                     /translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKLSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKTPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            complement(12073..12660)
                     /gene="acpT"
                     /locus_tag="OQQ57_001530"
     CDS             complement(12073..12660)
                     /gene="acpT"
                     /locus_tag="OQQ57_001530"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HCS1956340.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN"
     gene            complement(12715..13751)
                     /locus_tag="OQQ57_001531"
                     /pseudo
     CDS             complement(12715..13751)
                     /locus_tag="OQQ57_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709244.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
     gene            13883..15100
                     /locus_tag="OQQ57_001532"
     CDS             13883..15100
                     /locus_tag="OQQ57_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1956341.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKSWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(15104..15661)
                     /gene="dcrB"
                     /locus_tag="OQQ57_001533"
     CDS             complement(15104..15661)
                     /gene="dcrB"
                     /locus_tag="OQQ57_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HCS1956342.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAENNTTGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(15734..16399)
                     /locus_tag="OQQ57_001534"
     CDS             complement(15734..16399)
                     /locus_tag="OQQ57_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HCS1956343.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            16620..16865
                     /gene="tusA"
                     /locus_tag="OQQ57_001535"
     CDS             16620..16865
                     /gene="tusA"
                     /locus_tag="OQQ57_001535"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HCS1956344.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(16967..19165)
                     /gene="zntA"
                     /locus_tag="OQQ57_001536"
     CDS             complement(16967..19165)
                     /gene="zntA"
                     /locus_tag="OQQ57_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HCS1956345.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQAADEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIAHQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQSATHPLAQAIVREAQVAALAIPAAESQRALVGSGIEA
                     QVNGERVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAA
                     TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEYKVKAVTELNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(19239..19865)
                     /locus_tag="OQQ57_001537"
     CDS             complement(19239..19865)
                     /locus_tag="OQQ57_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HCS1956346.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYF"
     gene            20006..20365
                     /locus_tag="OQQ57_001538"
     CDS             20006..20365
                     /locus_tag="OQQ57_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HCS1956347.1"
                     /translation="MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVV
                     VSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
                     GTLSYKGTRFVSFVGEQ"
     gene            complement(20368..20637)
                     /locus_tag="OQQ57_001539"
     CDS             complement(20368..20637)
                     /locus_tag="OQQ57_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HCS1956348.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(20627..21223)
                     /gene="rsmD"
                     /locus_tag="OQQ57_001540"
     CDS             complement(20627..21223)
                     /gene="rsmD"
                     /locus_tag="OQQ57_001540"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HCS1956349.1"
                     /translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            21373..22866
                     /gene="ftsY"
                     /locus_tag="OQQ57_001541"
     CDS             21373..22866
                     /gene="ftsY"
                     /locus_tag="OQQ57_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HCS1956350.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
                     AKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQAL
                     AAEAAEEAVMVVPPVEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
                     RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
                     EILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFELQGKSVMLAAGDTFRA
                     AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
                     LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
                     TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            22869..23537
                     /gene="ftsE"
                     /locus_tag="OQQ57_001542"
     CDS             22869..23537
                     /gene="ftsE"
                     /locus_tag="OQQ57_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HCS1956351.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            23530..24588
                     /gene="ftsX"
                     /locus_tag="OQQ57_001543"
     CDS             23530..24588
                     /gene="ftsX"
                     /locus_tag="OQQ57_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HCS1956352.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTNFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            24833..25687
                     /gene="rpoH"
                     /locus_tag="OQQ57_001544"
     CDS             24833..25687
                     /gene="rpoH"
                     /locus_tag="OQQ57_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HCS1956353.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            25958..27061
                     /gene="livJ"
                     /locus_tag="OQQ57_001545"
     CDS             25958..27061
                     /gene="livJ"
                     /locus_tag="OQQ57_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     substrate-binding protein LivJ"
                     /protein_id="HCS1956354.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            complement(27260..27643)
                     /gene="panM"
                     /locus_tag="OQQ57_001546"
     CDS             complement(27260..27643)
                     /gene="panM"
                     /locus_tag="OQQ57_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HCS1956355.1"
                     /translation="MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
BASE COUNT         6590 a         7224 c         7740 g         6286 t
ORIGIN      
        1 ccaaatacaa aataatggca aatcatcatg ggataatttt tgatgagcag cgaaaacgtt
       61 acattatagg atcgataaca gtctctattg atgaaatgac caatgctctc gatccggtcg
      121 aattagcgga aattattaat aaaaagcacc atgctgtaat taatggcaaa aagtttaaaa
      181 atagccgggc tatctcttgt cgatccttta atcgttattt ttctgtttcg acagattaca
      241 gacctaaact tgaagcacta ttagcatgct cacaaatgtt aggtataaat caagttgttg
      301 cacataacgg taatggtgga agagaatgta taggtgaaac ggggacagtt ttaggtctta
      361 acgcccgtga cagtaaacat gctggaagaa tgttcagcat gcataattgc caaattaacc
      421 ctggtgcagg gcctgagata accactccct ggaagtctta ccagcatgaa aaaaacagaa
      481 atggacttat gcctttgatt agaaggcgca caatgttaca gctctgaacc atagacaaca
      541 tgaatattaa tgttactatc tggttgagac tgttgataaa acgtaaaaag gaatgctctg
      601 ttcctgcaac tgaacaggcg tgaaacgcga tccaacagga tggataccgt tttgtcagcc
      661 agttttatag atcacactta tgagtatgcg tgtttcattt acggccagga atgctgatga
      721 tgacaacatt actacccgtt ttcactaagc cttccccgtt ggcgctcaat gctctgcgcg
      781 ctggtcgtat ttgtcgtttc cttcttatcc cggatggaag aatccgctga acgtcgttcg
      841 gcggcagttg taacacgcgt cgtttgctta cagggattat ggcgggccga ttatggataa
      901 gagtaagcgc catctggcgt ggtgggttgt cggggcactg gcggtggctg ccgtcgtggc
      961 gtggtggctg ttgcgcccgg cgggtgtgcc ggaaggcttt gctgtcagca atgggcgcat
     1021 tgaagcgacg gaagtggata tcgccagcaa aattgccggg cgtatcgaca ccattctggt
     1081 gaaagaaggc cagtttgttc gcgaaggtga agtgctggcg aagatggata ctcgtgtgtt
     1141 gcaggaacag cgactggaag ccatcgcgca aatcaaagag gcacaaagcg ccgttgccgc
     1201 cgcgcaggct ttgctggagc aacgacaaag cgaaactcgc gccgcgcagt cgctggttaa
     1261 tcaacgccag gcagaactgg actccgtagc aaaacgtcat atgcgttccc gttcactggc
     1321 ccaacgaggg gctatttctg cgcaacagct ggatgacgac cgcgccgccg ctgagagcgc
     1381 ccgagctgcg ctggaatcgg caaaagctca ggtttctgct tctaaagccg ctatagaggc
     1441 ggcacgtacc aatatcattc aggcgcaaac ccgcgtcgaa gcggcacaag ccactgaacg
     1501 gcgcattgcc gcagatatcg atgacagcga actgaaagcc ccgcgtgacg gacgcgtgca
     1561 gtatcgggtt gccgagccag gggaagtgct ggcggcaggc ggtcgggtgc tgaatatggt
     1621 cgatctcagc gacgtctata tgactttctt cctgccaacc gaacaggcgg gcacgctaaa
     1681 actgggcggt gaagcacggc tgatcctcga tgccgcgcca gatctgcgta ttccggcgac
     1741 catcagtttt gtcgccagcg tcgcccagtt cacgccaaaa accgtcgaaa ccagcgatga
     1801 acggctgaaa ctgatgttcc gcgtcaaagc gcgtatccca ccggaattac tccagcagca
     1861 tctggaatat gtcaaaacgg gcttgccggg cgtagcgtgg gtgcgggtga atgaagaact
     1921 tccgtggcct gacgacctgg tggtgaggtt gccgcaatga cgcatctgga actggttccc
     1981 gtcccgcctg tcgcgcaact ggcgggcgtg agccagcatt atggaaaaac cgttgcgctg
     2041 aacaatatca ctctcgatat tccggcccgc tgtatggtcg ggctgattgg cccggacggc
     2101 gtcgggaagt cgagtttgtt gtcgttgatt tccggtgctc gtgtcattga gcagggcaat
     2161 gtgatggtgc tgggcggcga tatgcgcgac ccgaagcatc gccgcgacgt ctgcccgcgc
     2221 atcgcctgga tgccgcaggg gctgggcaaa aacctctacc acaccttgtc ggtgtatgaa
     2281 aacgtcgatt ttttcgcccg cctgttcggt cacgacaaag cggagcggga agtgcgaatt
     2341 aatgagctgc tgaccagcac ggggttagca ccgtttcgcg atcgtccggc agggaaactc
     2401 tccggcggga tgaagcaaaa acttgggctg tgctgcgcgt taatccacga cccggaactg
     2461 ttgatccttg atgagccaac aacgggggtt gacccgctct cccgcgccca gttctgggat
     2521 ctgatcgaca gtattcgcca gcggcagagc aatatgagcg tgctggtcgc caccgcctat
     2581 atggaagagg ccgaacgctt cgactggctg gtagcgatga atgccggaga agtgctggca
     2641 accggcagcg ccgaagagct gcggcagcaa acgcaaagcg ccacgctgga agaagcattt
     2701 attaatctgt taccgcaagc gcaacgccag gcgcatcagg cggtagtgat cccaccgtat
     2761 caacctgaaa acgcagagat tgccatcgaa gcgcgcgatc tgaccatgcg ttttggttcc
     2821 ttcgttgccg ttgatcacgt caatttccgc attccacgcg gggagatttt tggattcctt
     2881 ggttcgaacg gctgcggtaa atccaccacc atgaaaatgc ttaccggact gctgcccgcc
     2941 agcgaaggtg aggcgtggct atttgggcaa ccggttgatc caaaagatat cgatacccgc
     3001 cgtcgtgtgg gctatatgtc gcaggcgttt tcgctctata acgaactcac cgtgcggcaa
     3061 aacctggagt tacatgcccg tttgtttcac atcccggaag cggaaattcc cgcgcgagtg
     3121 gctgaaatga gcgagcgttt taagctcaac gacgttgaag atgttctgcc ggagtcattg
     3181 ccgctcggca ttcgccagcg gctttcgctg gcggtggcgg tgattcatcg cccggagatg
     3241 ttaatcctcg atgagcctac ttctggtgtc gatccggtgg cgagggatat gttctggcag
     3301 ttgatggtcg atctctcgcg ccaggacaaa gtgactatct tcatctccac ccactttatg
     3361 aacgaagcgg aacgttgcga ccgcatctca ctgatgcacg ccggaaaagt gcttgccagc
     3421 ggtacaccgc aggaactggt tgagaaacgc ggagccgcca gtctggaaga ggcatttatc
     3481 gcctatttgc aggaagcggc agggcagagc aacgaagccg aagcgccgcc cgtggtacac
     3541 gacaccaccc acgcgccgcg tcagggattt agcctgcgcc gtctgtttag ctacagccgc
     3601 cgcgaagcgc tggaactgcg acgcgatcca gtacgttcga cgctggcgct gatgggaacg
     3661 gtgatcctga tgctgataat gggttacggc atcagtatgg atgtggaaaa cctgcgcttt
     3721 gcggtgctcg accgcgatca gaccgtcagt agccaggcgt ggacactcaa cctctccggt
     3781 tcccgttact ttatcgaaca gccgccgctc accagttatg acgagcttga tcgtcggatg
     3841 agtgcgggcg atatcacggt ggcgattgag atcccgccca atttcgggcg cgatatcgcg
     3901 cgtggtacgc ctgtggaact cggcgtctgg atcgacggag cgatgcccag tcgtgccgaa
     3961 acggtaaaag gttacgtgca ggcaatgcac cagagttggc ttcaggatgt ggcgagccga
     4021 caatcgacac ccgccagcca aagcgggctg atgaacattg agacgcgtta tcgctataac
     4081 ccggacgtaa aaagcctgcc agcaattgtt ccggcggtga tcccgcttct gctgatgatg
     4141 atcccgtcaa tgctaagcac ccttagcgtg gtgcgggaaa aagagcttgg gtcgattatc
     4201 aacctttacg tgacccccac cacgcgtagt gaatttttgc ttggtaaaca gttgccatac
     4261 atcgcgctgg ggatgctgaa ctttttcctg ctctgcggcc tgtcggtgtt tgtgtttggc
     4321 gtaccgcata aaggcagttt cctgacgctc accctggcgg cgctgctgta tatcatcatt
     4381 gccaccggaa tggggctgct gatctccacc tttatgaaaa gccagattgc cgccattttc
     4441 ggaacggcga ttatcacgtt gatcccggcg acacagtttt ccgggatgat cgatccggta
     4501 gcttcgctgg aagggcctgg acgttggatc ggcgaggttt acccgaccag tcattttctg
     4561 actatcgccc gcgggacgtt ctcgaaagcg ctggatctga ctgatatgtg gcaacttttt
     4621 atcccgttgc tgatagccat cccgctggtg atgggcttaa gtatcctgct gctgaaaaaa
     4681 caggagggat gatgcgccat ttacgcaata tttttaatct gggtatcaaa gagttgcgca
     4741 gtctgctcgg tgataaagcg atgctgacgc tgattgtctt ctcgtttacg gtgtcggtgt
     4801 attcgtcagc gaccgttacg ccaggatcgt tgaacctcgc gccgatcgcc attgccgata
     4861 tggatcaatc gcagttatcg aaccggatcg ttaacagctt ctatcgtccg tggtttttgc
     4921 caccggagat gatcaccgcc gatgagatgg atgccggact ggacgccgga cgctatacct
     4981 tcgcgataaa tattccgcct aattttcagc gtgatgtcct cgccggacgc cagccggata
     5041 ttcaggtgaa cgtcgatgcc acgcgcatga gccaggcatt taccggcaat gggtatatcc
     5101 agaatattat caacggtgaa gtgaacagct ttgtcgcgcg ctaccgtgat aacagcgaac
     5161 cgttggtatc gctggaaacc cggatgcgct ttaacccgaa ccttgatccc gcgtggtttg
     5221 gcggggtgat ggcgatcatc aacaacatta ccatgctggc gattgtattg accggatcgg
     5281 cgctgatccg cgagcgtgaa cacggcacgg tggaacactt actggtgatg ccgataacgc
     5341 cgtttgagat catgatggcg aagatctggt cgatggggct ggtggtgctg gtggtatcgg
     5401 gattatcgct ggtgctgatg gtgaaaggtg tactgggcgt accgattgaa ggctcgatcc
     5461 cgctgtttat gctgggcgtg gcgctcagtc tgtttgccac cacgtcaatc ggcattttta
     5521 tggggacgat agcgcgttca atgccgcaac tggggctgct ggtgattctg gtgctgctgc
     5581 cgctgcaaat gctttccggt ggatccacgc cgcgcgaaag tatgccgcag atggtgcagg
     5641 acattatgct gaccatgccg acgacacact ttgttagcct cgcgcaggcc attctctacc
     5701 ggggtgccgg attcgaaatc gtctggccgc agttcctgac gctgatggca attggcggcg
     5761 cgtttttcac cattgcgctg ctgcgattca ggaagacgat tgggacaatg gcgtaaggaa
     5821 gggaaacttg acttcatact gtgatgtcat actattgatg tcataaagtg aagtcataag
     5881 gacatgccat gagaaccaag gtacaggctt tacggaagaa acaaaaaaat acattggatc
     5941 aaatatttaa aactcctgtt cctcaaggga tcaagtggtc tgatatagag tcactggtta
     6001 aagcattagg cggagaaatt aaggaaggaa gaggttcgcg ttgtaagttc atactaaata
     6061 tgagcgttgc gtgtttccat cggcctcatc cgtcgccaga taccgataaa ggcgctgtag
     6121 aaagcgtgcg tgactggtta ctaagtatag gggtaaaacc atgatcaaac tgaagacgcc
     6181 aaactctatg gagattgccg ggcaaccagc tgttattacc tacgtgccag aactgaatgc
     6241 atttcgtggc aaattcctgg gcttgtcagg ttattgtgat tttgtctctg acagcattca
     6301 ggggctgcaa aaagaagggg aactttccct gctagagtat cttgaggatt gtaaagctgc
     6361 gggtattgag ccgtatgcgc gtacagaaaa gattaagacc tttacgttac gctatccaga
     6421 atcgctgagt gaacgcctta ataatgcggc tgcgcagcaa caagtctctg ttaataccta
     6481 tattattgaa acactgaatg agcgtttgaa tcatttataa attttagcgg cgtacattac
     6541 gcagaatatc tgcctttaca ggatctatct atgcaactga acttaatttt ataaattaag
     6601 ttcagttaat atcttttctt tcctcgtttc agaaataact caatcttcct tcggcaagca
     6661 ctgcaaatgc ccatgccgca cgccgcgctg ggcgataacg tcatcggcaa aatgctgcac
     6721 gtcgcccata tcacctttca gcacggcgat ttccagacag tcgtcgtgat tgatatgcac
     6781 atgcagcgtg gcgacggaga gatcgtggtg atggtgctgg gtggagacaa tgcggctggc
     6841 taagtcgcgt ttttcgtgtt catacacata ggagagcacc gcgaaacctt gcgtgccgtg
     6901 ctgctgagtg gcctcctggg ccagggcgct acgcagaata tcgcggatag cttcggaacg
     6961 gttgttataa ccacgacgct ggctcaggct gtccagcgtc tccagtaaat cgtcatcaag
     7021 cgtgatggtg actcgttgca tttgcgttaa accttttctg tggcgcgacg gcgcacgggg
     7081 aatgcgggta ataccgcgtt ttgtagcaca cgtccggcgt cagaggaaaa ggttaattta
     7141 tctcccaccg cctgggtttc gacgatttgt ccgttgtcca tcaccatcac ccgctggcaa
     7201 aagcgttcta caagacgtaa gtcgtgggtg atgaacaggc aggcggtgcc aaactgttgt
     7261 tgcagctttt tcagcaggcg aatgacgccc gcctgtaaca cgagatcaag gttagaaacg
     7321 gtttcatcca gaatcagcaa tttcggttcg accgccagcg cgcgtgccag gcagacgcgc
     7381 tggagctggc cgccgcttaa ctgcggtggg cgtttgtcga gaacgctgtc atcgagatcg
     7441 accgccttca gcatttcgct ggcgcgcgcc agttgttcgg attttttcag tgatagcagg
     7501 tggcgcatcg gttcacgcag gatctcgcgc acggttttgc gcggattcac ggcactgatg
     7561 gagtcctgaa acaccatctg aatatcacgg cggaaggctt tacgttgggc gcgattaagt
     7621 ttcgccagcg attcgccgcg ccagctaata ttcccttgtg agggagactc taagcctacc
     7681 agcagccgcg cgagggtgct ttttccgcag ccgctgcgtc ccagcagggc gacggtttcg
     7741 ccgcttttca gggtcaggga aacgttattc agcaccgcct gatgttgatg ttttccgcta
     7801 aatccaccgt gggcatagtg atgggaaagg ccgctgacgt taagtaaggt catgatgcca
     7861 gctccatacc gtagagggcg agatgagcgg aaaccaggct gcgcgtcacc gtatgtttgg
     7921 gggcgttaaa cagcgtttct acatcgccct gttcgacaat tttaccttgt gacatcaccg
     7981 ccacgtcatc cgccagacgc gccacaacgc ccatatcatg ggtgaccagc agcattcccg
     8041 gcgcttgttt ttgcataatg ctttccagca gatcgaggat gcgcgcctgt gctaccacgt
     8101 cgaggtcggt ggtcggttca tcggcgatga taaacggtga ttcacacagc accgccatcg
     8161 caatcatcat gcgctgcaac atgccgccgc tcatctcgaa cgggtacagc ttcagcacgc
     8221 gcgcggcgtt ttccagcccc accgcttcta tggcagcggt aagcgtagcg tcatcggcgg
     8281 gtttccctaa cgccaggcag gtttcccgcg cgtgggtgtg catggtgtgt agcggattaa
     8341 aggcgctgcg cgggttctgc atgatggtgg caattttgat gccgcgcagg gcgcagggat
     8401 aaaccgcttt gccatcggct aaaatttccc ccgccgtctg gcgaacgcca gcgggcaaaa
     8461 tgcccagcgt cgcggcgcag gttaatgatt tcccgctgcc gctaccgccg actaacgcca
     8521 gcacgcgccc gcgttgcagg gttaacgata caccgtgtac cagcggctgc gcggcctgta
     8581 gcgcgatatt acgtagttca atctgttgcg gcattagtgt gcgtgctccg tcaccagatg
     8641 agggtccaga tgatcgcgca gtgcgtcacc caccaggtta aaggccatca cgctgataaa
     8701 cagcgccagc cccggccaga acatttgcag cggctgggtc cagatatact ggcgcgcgtc
     8761 gttaatcatc acgccccatt cggcggtcgg cgcggtcaca ccgaggccaa ggaaagacat
     8821 ccccgagacg tgcagcatca tatggccgat atccagcgtt gccagcacca gcagcgaagg
     8881 gatcaccgcg cctgccagat gatcgacaaa cactcgcaca tggcccgcac cggaaagccg
     8941 tgacgccagc acaaactcgc gttggcgtag tgaaatcacc aggctgcgca ccatgcgtgc
     9001 ataccacgcc cagtgcgaca gggcgatggc gataattacg ttggtcagcc cggtgccgag
     9061 cacgccaacc ataaagaacg acagaatcga ggtcgggaag gtcataaaca tatcggcgac
     9121 gcgcatggtg gcctgatcaa cgcgcccgcc aatcaacccg gcgctgccgc caataaccag
     9181 ccctaatgtc agcaccagca gcaggcaggc cattaccgaa ccgagcgaca cgcgggtcgc
     9241 tgccatcagc cgcgagaaaa tatcgcgacc taagtgatcg gtgcccagcc agtgctgcgc
     9301 atccggcgaa agcaggtgcg acggcaaatc aatcgcctgg gggtcatacg gcagccacca
     9361 ctggctggtg agcgcaatca gcgccagcag ggcgataatg atcagcgcca ggcgtaccga
     9421 ccagcgggaa gagaggaaaa agttcacgcg tgcgctcctt catgacgacg aatgcgcggg
     9481 tccagcgcgg cgttgagcaa atcgacaatc aaattacaga ccacaaaaac caccgccatc
     9541 atcagcgtaa agcactgaat caccggatag tcacggttaa aaatcgccga caccgcatag
     9601 cgcccgacgc caggccaggc aaagatgttt tcgataatca tcgtcccgcc aatcaattcg
     9661 ccaatgtgca tccccacggc ggtgatcatc ggcagcgagg cattgcgcag aatatggcgg
     9721 cgttcggtct gtttgtcatt caggccgcgt agccgcgccc aggtgacgtg acgctgaccg
     9781 gcgacgtcca gcatactggc gcgcagcagt cgcgcgttaa tcgccagcga cataaaggcg
     9841 atggaaaccg caggcaaaat gatgtgctgc cagccgccgt agcccatcgc gggtagccat
     9901 tgcagataca ccgaaaacgc catcactagc aaaaatgcca gccagaagtt gggcatcgac
     9961 acgccaagaa acgcgataaa gcgcacggcg aaatccggca aacgatcgcg gtggcgcgcc
    10021 gcccagatac cgagcggtac ggaagtgagc agaattaata ccagcgccgc acctgcaagt
    10081 tccagcgtgg cgggcaggaa gttcagcata tcgtccagca ccgggcgttg gctggcgaat
    10141 gagataccaa agtcaagatg cagcgccttc cacaaccagg tgccgtactg gacgtacagc
    10201 ggctgatcca gtccgagcat ggtgcgggta gaggccagca tctccggcgt cggcggcagg
    10261 ttagacagac gcaaataatc gagcgccggg tcgccggtac cgaggcgcag catcagaaaa
    10321 atgatcaccg aggcggcgag caccatcggg atcagcagca gaaagcggcg taatacgtaa
    10381 cgcaacatta aggtttcacc ggtttaatct gttcgaacgg aatttcggtg gcgatcggcg
    10441 cgtaggggat gttacccagc tccggttttg ataccaccat cattgagatg taactgatag
    10501 gcagataaac cgcctcgtca tgcagacggg tcagaatgtc gcgatacagt gcctgacgtt
    10561 gcgtttcgtc atgggtcgcc agcacttcgc cgatctcttt atcaatcagc ggtttgtcgg
    10621 ctaatccttg ctgtgcctgg aagtcagcgt gcgacggtac gcgcattgaa ctcaggaagg
    10681 cgtgtggatc gtatggcgcg ccccaggtgc ggtggaaaat catgccaaaa cgaccgtcgc
    10741 gctgacgagc atagatactg ctctcttctt cgccaatcag cgagacatct gcgccaatct
    10801 ggcgcatatc agcctgaatg atttccgcca tcgatttgct taacgcatcg gtgccgatga
    10861 acgacagttc aatgcgcagc ggctgaccat ttttctcgcg gatgtctttg cccgcaggca
    10921 gcgtccaacc ggctttttcc agcaacgctt tcgctttctg cggatcgtac tggcgcggtt
    10981 tcaggccgag gttggcgtag ggcacagaag gggcaaacag ggtgtcggcg acctgctggg
    11041 tgccatacaa cgcgttatca atcagcgatt ttttgtttac cgcgtaatta agagcttcac
    11101 gtactgccag ctcattggtg ggggttttgg cggtattaag cgccagcatc acggtttcga
    11161 tcggctgtga cagttgggta tggtaagccg ggttctggct aaagcgggcg aaggtatcga
    11221 gcggtaataa cccttcgttt ccgtacagca ggtcgatatc gccagtttca aacgccaccg
    11281 cgcgggtagt cgggtccggg atgacgttaa aggtgatctt tttaatcgct ggcttttcgc
    11341 cccagtagtt ttcgttacgg acgaagacat cgtactgatt cagtttcgat tcctgcaaaa
    11401 tccacggtcc ggtgccaatc ggcgctttaa ttccgttcat ggtttcatgg tttttaaact
    11461 gcgagggagc gataaaacgg aaaggacggg gcagggccag ttcttgcagg aaaggatagt
    11521 aggcgctttt cagggtaatt tgcagctctg ttttactgag tgctttaaca tcaacaatct
    11581 ggtttgccag ctccagccag gcgtgacgtt gacggttatc gagcactgcg cggaagtttt
    11641 ctgccgccgc ctcggcatcg aacggttcac cgttggataa tttcacgtca tcacgcaggg
    11701 tgaaggtcca ggttttacca tcttctgaat gagtccagct ttttgccagc cacgggatca
    11761 ccgaaccgtc tgcctgatat ttcaccaatg gttcataaac catgctctgg gcgaacatct
    11821 ggttaggcgt gtaaaggtgc gggtttagtg gcccgacatt caccggccag gcggtagtga
    11881 tttcatctgg tgcagcggca tggacgataa aagacgcaca agccagcagc gcaaatagag
    11941 tgcggcggag tgtggagagc atgataaccc caatggatta aaatagatgg cggaaataag
    12001 tatgacgatt ttaagtattc gtcatactga ttacctgttc tggatcaata gatgggcagt
    12061 cgggtgggcg gatcagttaa ctgaatcgat ccattgcaca ctgtcggcgg tgagcgtaaa
    12121 gggggtgggg gtgcagatcg caaggcttaa attttctagc tgacaatggc tgactgacag
    12181 cgaggagtga taggtgctat ctacgctgac gatttgccag gcgctgccgc cacgctgttt
    12241 aacgatggct tctttgcgcg tccagatgcg ccagaacatt tccagttgct gatcaggatg
    12301 cacggcgtcc atttcagcgt gttccccgag gctgaacacg gcgttcgcca gccagcgcca
    12361 gttggcgcgc gggcgaatca cttcgatatc gcagccgact tcgccttcat cgctcaacag
    12421 cagagcgata tcgtcaccgc tatggcttaa gttgaaccat agcggcgttt ccggcgcgaa
    12481 tgcaggtttg ccttgttcgc catagatgat ctccggtagc ggggaaagcg tgtgcgaaag
    12541 caatgcacgc cccgccagcc agcgttcgcg tcgtggacct tgcggtgctt gctcgcgtaa
    12601 acccggtggc agtggagctg cgcttaaggt cgaaactttc cccagaacta tccgatacat
    12661 atcagggcca acgtttaatg gaaaatgaaa gtgcgtatcg tatcacttgt cgcctcatcc
    12721 cggtaaccga cttttcggtc tgcctagccc cagtaaaatc gccagtttgc taccgccttt
    12781 ggtggtttcc atccagattt tacacacgct ggttaatggc accgaaagta gcatccctac
    12841 cgggccgagc agccatcccc aaattaacaa tgaaagaaat accaccatgg tggacatccc
    12901 caggcgatgg cccatcatcc gtggtcgatg accatatgga ccactaaaaa caatgcgccg
    12961 accagaatac atgcgtaaac accattaaac agcagcacct gaatcattgg cggtacggcg
    13021 gaaattaccg cgccgatatt gggcacgtag ttgagcaaaa acgccagtac tgcccacatc
    13081 agcgcaaact gtacgcccat tagcgccagc cccagccaga cgatgacacc tgtccataaa
    13141 ctgagtagcg tctttaacgc cagataatgc gaaacgcctt taagtgcgcg gtgtaatcct
    13201 gcgatgtgaa tctgtgggtt attcagcgca aaacgcattt tgtaagggac gtggcgcact
    13261 tcaaacagca taaaaactac ggtcatcacc agcaaaagca cgctcgccat tgccccggaa
    13321 agcccgatca ttagcgctgt ggtgaaggta accacttttt ccgagtccat ccgctgcagc
    13381 attcgctccg gcgacatatg caaattaaga aaaggcaaca tctcctgcaa tttaaaaagt
    13441 ttgcgcgtca gctccttatt aaacttcggc agcatagaga taaattcgtt aaacgatgcc
    13501 gccagtacgc cgactagcgc ggttagtgcg atcagcatca ccaccactac aatcgtaatg
    13561 gtaacggggc gttgtactcc ccgacgaata aaccaggtaa cgagcgggtt gaggacgatg
    13621 gcaaaaaaca gcgccagtaa cagctgcaca atgatatctg ccgctgcgtg aatgcccgcg
    13681 aggatcacta ccagcgaggc caacttgagc agaatgtgca tgcccgtttt atcgggttga
    13741 ggggtttcca ttggggcttc cttgtgactt tttgtgttaa gtgtagcggg agtcacgtca
    13801 gcaatattct gattcttact gctgattttc acgtcagcac gtggtaaaaa tgaaacactg
    13861 ttgtaaaaat gtggtgatcc tcatgcccga acccgtagcc gaacccgcgc taaacggatt
    13921 gcgcctgaat ttgcgcattg tctccattgt catgtttaac ttcgccagct acctcaccat
    13981 cgggttgccg ctcgctgtat taccgggcta tgtccatgat gtgatgggct ttagcgcttt
    14041 ctgggcagga ttggttatca gcctgcaata tttcgccacc ttgctgagcc gtcctcatgc
    14101 cggacgttac gccgatttgc tgggccccaa aaagattgtc gtcttcggtt tatgcggctg
    14161 ctttttgagc ggtctgggat atctgacggc aggattaacc gccagtctgc ccgtcatcag
    14221 cctgttatta ctttgcctgg gacgcgtgat ccttgggatt gggcaaagtt ttgccggaac
    14281 gggatcgacc ctgtggggcg ttggcgtggt tggctcgctg catatcgggc gagtgatttc
    14341 gtggaacggc attgtcactt acggggcgat ggcgatgggt gcgccgttag gcgtcgtgtt
    14401 ttatcactgg ggcggcttgc aggcgttagc gttaatcatt atgggcgtgg cgctggtggc
    14461 cattttgttg gcgatcccgc gtccgacggt aaaagccagt aaaggcaaac cgctgccgtt
    14521 tcgcgcggtg cttgggcgcg tctggctgta cggtatggca ctggcactgg cttctgccgg
    14581 atttggcgtc atcgccacct ttatcacgct gttttatgac gctaaaagtt gggacggtgc
    14641 ggctttcgcg ctgacgctgt ttagctgtgc gtttgtcggt acgcgtttgt tattccctaa
    14701 cggcattaac cgtatcggcg gcttaaacgt agcgatgatt tgctttagcg ttgagataat
    14761 cggcctgcta ctggttggcg tggcgactat gccgtggatg gcgaaaatcg gcgtcttact
    14821 ggcgggggca gggttttcgc tggtgttccc ggcattaggt gtagtggcgg taaaagcggt
    14881 tccgcagcaa aatcaggggg cggcgctggc aacttacacc gtatttatgg atttatcgct
    14941 tggcgtgacc ggaccactgg ctgggctggt gatgagctgg gcgggcgtac cggtgattta
    15001 tctggcggcg gcgggactgg tcgcaatcgc gttattactg acgtggcgat taaaaaaacg
    15061 gcctccggaa cacgtccctg aggccgcctc atcatcttaa aacttactga ataaccagcg
    15121 tattaatgat gttttctgcg gtggtctgcg ctttttgctg atcgtcagcg ggcagcgtaa
    15181 tttgcatggt cagcagttga ttacccacgt tacccagaat aacggaagag tacgccgtct
    15241 ggcctttcgc ggagataata ctgtctaact gctgcatttt gtgacctttc agctcaatgg
    15301 ctttattggt taccacttgc agctgcggat cgcggctacg ttgctgatct tccagacgct
    15361 tcgccagcac cgccagatct tctttcggat catcgcccat gatgacgatg actgctttct
    15421 gcccggtggc gtcggaccag acatgcatgt tattggcctg cgttcccagc ttaccgctct
    15481 ggtcggtcat atccgctggc agcgagaaac ttaacttgcc atcaagcagg ttgacgggat
    15541 tcccggtagt gttattttcc gcgaccgaac cctgcgccgt agcgttagtg tctttatcat
    15601 cacaggccgc aagccccata accagcaggc caattccgac atatttaacc agattgcgca
    15661 ttgacttctt cctttcgata aacggccata acggctcatt catccatctt atcacaactc
    15721 tgataacgaa cctttaactc gcctgcaaag cgttgatttc ggatttatct gccagtcttt
    15781 tcaacagcat attgagtaat acgccataca ttggcaggaa gaaaacgata ctgattaaca
    15841 ctttgaaaca gtaatcgacc agcgcgattt ccatccagtg ttcagccata aaggcatccg
    15901 ggctacgcca gaaggcaatg aagaaaaagg ccagcgtgtc gctgacgtta ccgaacagtg
    15961 tggacgctgt cggtgccagc caccagcggc gactctgacg caggcggtta aaaacgtgca
    16021 cgtcgaggat ctgtcccagc gcgtaggcca tgaaactggc ggtggcgata cgggcgacaa
    16081 acaggttgaa gtgggcgagt gcgccgaatc cctgccagga acccatatag aatagcgacg
    16141 agatgacgta ggagatcagc aacgccggga tcatcaccgc aaagatgata cgacgggcca
    16201 gcggtgcgcc aaaaatacgc acggtcaggt cggtagcaag gaaaataaac gggaagctaa
    16261 acgcgcccca ggtggtatgg aaacccaaaa tggagacggg aagctgaacc agatagttac
    16321 tggaggtgat caccagcaga tgaaataacg ataaccagaa caacgcctta tagcgttgag
    16381 tttgcgagaa aacgttcata ttgtaccttt ttgattaacc attggggtga gggaacccaa
    16441 tacgtacgac acgtctgtta ccttaacata ataacgtgct tacccttttt tcgagccgcc
    16501 gcatgatact gctttacgtt gacaatgcaa tggttaattt tcacgcaatc gttaacctgg
    16561 tttgcttacg gactcacagg gcgtaaacta gcgccgtttt tttatgtgat gagaagaaaa
    16621 tgaccgatct cttttccagc cctgaccaca cactcgacgc acttggcctg cgctgcccgg
    16681 aacccgtaat gatggtgcgc aaaactgtgc gcaatatgca gcccggcgaa acgttgctga
    16741 ttatcgccga cgatccggcc actacccgcg atattcctgg gttttgtacc tttatggaac
    16801 acgaactggt tgcgaaagag acggatggac tgccttatcg ttatttgatt cgtaaaggcg
    16861 gttgatgggg gctgattggc ttcgatgccg ccttttcccc tcaccctaac cctctcccca
    16921 gaggggcgag gggaccgatc gcgctcaatg ttgcgatcgg tttgccttat ctcctgcgca
    16981 acaatcttaa cgcattcgct gtcaccagca ccgtcgcacc cgtatctgcc agcaccgcca
    17041 gccatagtcc ggtcatccct aaaagcgtgg tgacgaggaa gatccctttc agtcccagcg
    17101 caatggtgat gttctggcgg atattggcgt gagtggcgcg tgccagttca atcatttgca
    17161 ccaggccgcg caggtggtta tgggttaatg ctgcatcagc ggtttccagc gccacgtctg
    17221 tgccactgcc cattgcaatc ccaatggcgg cagctttcat cgctggcgcg tcgttaatac
    17281 cgtcaccgac catcgccagc ggcgcatgtt gattcagctc ggtcaccgct ttgactttat
    17341 attccggcaa caggcccgct ttaaactcca gccccagctc cccggcaatt gccgccgctg
    17401 cgcgtggatt atcgccggtg aggatcaccc ctttgacgcc cagcgcgttc agttcactga
    17461 tggcagttgc agcatcggcg cgcagggtat cctgcaatgc aatgataccc agcacgtcat
    17521 cattacgtac taccagcaca accgtttgcc cggcgctttc cagttcatta atcaaaccag
    17581 caaatgcatc agcgggatgt ttcccggcag cgcatatcaa cacgcgctca ccgttaacct
    17641 gcgcttcaat gccagacccg accagcgccc gctgtgattc ggcggcggga atggcgagtg
    17701 cagcaacctg tgcttcgcgc acgatggcct gcgccagtgg atgcgtcgcg ctttgctcga
    17761 ccgccgccgc cagtgtcagc agttcagatt cactaatacc cgttgccgga tgaatcgcgg
    17821 taacgcgcgg tttaccgacg gtcagcgtac cggttttatc aaacgccacc tgagtaacac
    17881 gacctagttg ttccagcgcc gctccgcctt taatcaacgc cccacgacgc gctgctgccg
    17941 ccagcccgga ggtaatcgcc gcgggcgtgg agataactaa cgcacacggg cagccaatca
    18001 gcagcagcgt caggccttta taaatccact cctgccagct ggcggcaaac agcagcggtg
    18061 gcaccagcgt caccagcagg gcgacggcca taatcgctgg cgtataaata cggctgaaac
    18121 ggtcgataaa ccgctcaatg ggggcgcggc gctcttcggc ttcttcgatc agtttcagaa
    18181 tccggtcaat ggcgctggca cccggttctg acagcacttc cagcgttacc agacggtcta
    18241 cgctggtggc tcctgcagga actttatcgc ccgtcgcgcg ctccaccgga atggattctc
    18301 cggtcagggc gctttcatca aaactggcaa acggtgagag cagtttaccg tcggcaggca
    18361 aacgcccacc tgcggcgact tcaatcacat cgccaggccg caggctgtta atcgccacct
    18421 cttcccgctc accgttacgc aggcgcgtgg cggtttctgg tttcagcgcc attaacgcgc
    18481 taacgccctg acgcgcgcgg ctggcggccc agccttccag tcgttcacca atcaaaaaca
    18541 gcagcaacac catcgcagct tcagccgttg cgccaataaa cagtgcacca atagcggcta
    18601 cgctcattaa ggtttcaatg gcgaagtagc tgccggattt gatcagccgt aatgcctgat
    18661 gagcaatcgg gtacagccca accagcgtgg tcgcgataaa cgccagttgc ccgaacggat
    18721 gattgaactg ctccagaccc cagctgattg ccatcatcac gattagtgta atcagcggca
    18781 gattctcttt caggcgcgat gcttgtggct cgtcggcggc ctgctcatcg cgcagggaat
    18841 agcccgcttt ttgcaccgca gattcaactt gtgcacgaat gtcattgtcg gcatcaacca
    18901 ccagtttttc ggtggcgaac aacacctgca cctgattcac acctgcaagc tggcgcacgg
    18961 cattttctac cttgcgcgca caggcggcgc agtccatgcc actgactttc cagctatagc
    19021 gggtgccgga gacgttttca gagagcgttg gcgagctgga gcatgcgccg tcgcagcaac
    19081 agtcgttggc gttctgtacc gtggttagcg gtttgaacgc agcaaattga ggggctttct
    19141 tgccgtgatt gtcaggtgtc gacatggcat actccggtta agttttttct cattaaccga
    19201 aggatacact ctggagtcga ctccagagtc aagttttatc agaaatacag tgagcggacg
    19261 atgaggaagt gaccggcaaa gtagcaggcc gcagcaatcg cgttatccgc acggaagcgt
    19321 cggcgatagt ggctccccag ccagacaaag ttactgataa acagcaacga agcgccaaca
    19381 aacgcagaga gcgccggagc ggtcggacgg aagaaccaca gttcacctgc cagccacacc
    19441 atcaccagcg tcatgccgat aaacgtgcag ataggccaac gatactcttc cagccgcgtc
    19501 cagataatcg ccagtaacag cgcacccaga accagcaaca ccagtggcag aggccagaag
    19561 aaagagagcg tcatctgact ggcgaaatag atggtgtaca gcaggtgcga gaggaaaaac
    19621 gcgccgatgg cgtacatcag acgttgacgt ggcaacaggg ttagcgcatc gcccagcagt
    19681 gaggcgcaca gccctgccag caccagatag ctaatggcgt cgaacatcgg cgcttgccag
    19741 gccagtaaca gcaggagaag aagggttaac ggtttaaaca cccagcgttg ccaggttggc
    19801 ccacgatacg atgcatccac agatagccat gcggaaagac agacagcgat aaacgaccaa
    19861 agcatcttag ttccttgaat tcgttatttt ttcgtaagcg gaatgcctac ggtcttgctt
    19921 ccagtttagt ggcgagggtg gacggatgac aacaccataa ctagcagggt atgcttattt
    19981 ccgcattttc cgatgaggga taaagatgag caaaccacct cttttcttta ttgttatcat
    20041 tggcttaatt gtcgtcgccg catcgtttcg ttttatgcaa cagcgacggg aaaaagctga
    20101 taatgatatg gctccgctcc agcaaaagct ggtggtggtg agcaacaagc gggaaaaacc
    20161 gattaacgat cgccgttcgc gccagcagga agtgactccg gcaggcacca gtatgcgcta
    20221 tgaggcaagc ttcaaaccgc aaagcggagg aatggagcag acgtttcgcc tcgacgccca
    20281 gcagtaccat gccctgacag tgggcgataa aggtacgctg agctataaag gaacgcgctt
    20341 tgttagcttt gttggcgaac aataaggtta ttttttaact ttaaatttct tctgccagac
    20401 cagcagttca aacacgccga aaaggaaaat ccgcaccttt tcggcggtgg tcatctgcgg
    20461 gccatctttc ggtaaagtgg atttcaatag cgccagctgc ataccatgca tcagcacggt
    20521 aaaaatcagc gccacgttaa cgaaaatatt cagcgggcgc gggaagggat gcaccagatt
    20581 gaggattaaa aatccccaaa cgcagagcat taacaaacga ccaatattaa tcagcatcac
    20641 tttctccttg tgcttcgcgt tgatacagcc gataagccac ctgacccgcc actttttccc
    20701 gatgtaatga ccagtttgcc ggaacagtgg gcagaccgtt ttcgacttcg ctttcgacat
    20761 aaatcagggc ttcgtcagcc agccagccgt tatcttccag taaatttatc gtctcttcta
    20821 acaagccacg gcggaacggt ggatcgacaa acacgatatt atgcggtgta cctttttgcg
    20881 ccaggaatga catcgcgttg ctgttcacca cgcgtgcatt gcctgctttt agtgtcgcca
    20941 gattcttaat taactgctga gaaaccgcgc gatccatctc aatcaacgtg gcccccgcag
    21001 cgtagcgcga taacgcttcc agtcccagcg cgccgctccc ggcgaagcaa tccagacatt
    21061 gggcgtcaac aatgaccgga gccagccagt taaacaatgt ttcgcgtacg cggtcggtgg
    21121 tggggcgcag acctgggcta tcaggaaccg ggagtttacg gcctcgccac tgcccgccaa
    21181 taatgcggat ttggccgctg ccggaatgat tcggtttttt catgataaat tgctcaatcc
    21241 gccagataac acatacttgc aggcggtgat gtgaattaag ttaagtgata gactatttca
    21301 tcattttttt agctgctatg tacatagcgt taacgctgtg ccatgaagca acagcgagga
    21361 gtgtagtcgc aaatggcgaa agaaaaaaaa cgtggctttt tttcctggct gggctttggt
    21421 caaaaagagc agaccccgga aaaagagaca gaagttcaga atgaacaacc ggttgtagaa
    21481 gaaatcgttc aggcgcaaga gcctgcgaag gcttctgaac aagccgtcga agagcaaccg
    21541 caggcgcata ctgaagccga ggcggaaact tttgctgccg acgttgtgga agtcactgaa
    21601 caggttgctg aaagtgaaaa agcgcagcct gaagcggaag tcgttgcaca gccggaaccg
    21661 gtcgtagaag aaacgccgga gccagtggct atcgaacgtg aagagctgcc gttgccggaa
    21721 gacgtcaacg ccgaagaggt ttcgccagaa gagtggcagg ctgaagcgga aaccgtagag
    21781 attgtcgaag cggcggaaga agaagcggct aaagaagaaa tcaccgacga agagctggaa
    21841 gcacaggcgc tggctgccga agcggcagaa gaggcggtga tggtggttcc tccggtagaa
    21901 gagcagccgg tggaagaaat cgctcaggag caggaaaaac cgaccaaaga aggtttcttc
    21961 gcgcgcctga aacgcagcct gttaaaaacc aaagaaaatc tcggttccgg atttatcagc
    22021 ctgttccgcg gtaaaaaaat cgacgatgat ctgtttgagg agctggaaga acagctgttg
    22081 atcgccgatg tgggcgtgga aaccacacgt aaaattatca ccaatctgac ggaaggcgca
    22141 tcccgcaagc agcttcgtga tgccgaggcg ctctatggcc tgctgaaaga agagatgggc
    22201 gagattctgg cgaaagtcga tgagccgctg aatgttgaag gtaaaacgcc gttcgtgatc
    22261 ctgatggtgg gcgtcaacgg tgtgggtaaa actacgacga ttggtaagct ggcacgtcag
    22321 tttgagctgc agggtaaatc ggtgatgctg gcggcgggcg atactttccg tgcagcagcg
    22381 gttgaacagc ttcaggtctg gggtcagcgc aacaatattc cggtgattgc ccagcatacc
    22441 ggtgcggatt ccgcctctgt tatcttcgac gccattcagg cagctaaagc gcgtaatatc
    22501 gacgtcctga ttgccgatac cgccggacgc ctgcagaaca aatcgcacct gatggaagag
    22561 ttgaagaaaa tcgtccgcgt gatgaagaaa ctcgacgttg aagcgccgca tgaagttatg
    22621 ctgactattg atgccagtac cgggcagaat gcggtaagcc aggccaaact gttccacgaa
    22681 gccgttggct taaccggcat cacgctaacg aaactggacg gcacggcgaa aggcggggta
    22741 attttctcgg tggctgacca gtttggtatc cctatccgct acattggtgt cggcgaacgt
    22801 attgaggatt tgcgtccgtt taaggcggac gactttatag aggcactttt tgcccgagag
    22861 gattaacaat gattcgcttt gaacatgtca gcaaggctta tctcggtggg agacaggcgc
    22921 tgcagggcgt tacgttccat atgcagccgg gtgagatggc gtttctgacc ggtcattccg
    22981 gcgcagggaa aagtaccctc ctgaagctga tctgtgggat tgagcggccc agcgccggga
    23041 aaatctggtt tagcggccat gacatcacgc gtctgaaaaa ccgtgaagtt ccgtttctgc
    23101 gccgccagat tggcatgatt ttccaggatc accatctact gatggaccgt actgtctacg
    23161 ataacgtggc gatcccgctg attatcgctg gtgccagcgg tgacgatatt cgtcgccggg
    23221 tgtcggcggc actggataaa gtcgggctac tggacaaagc gaagaacttc cctattcagc
    23281 tttccggcgg tgaacaacag cgtgttggca ttgcccgcgc ggtggtgaat aagcccgcgg
    23341 tactgctggc ggacgaaccg accggtaacc tggacgacgc gttgtcggaa gggattctac
    23401 gtctgtttga agagtttaac cgcgttgggg taaccgtatt gatggcaacg cacgacatca
    23461 acctgatttc acggcgttcc tatcgcatgc tcaccctgag cgatggtcac ttgcatggag
    23521 gcgtgggcca tgaataagcg cgatgcaatc aatcatattc ggcagtttgg tgggcgtctg
    23581 gatcgcttcc gtaaatcggt cggcggctca ggcgacggcg gtcgtaacgc accgaaacgc
    23641 gcgaaatcct cgccaaaacc ggtaaatcgc aaaaccaacg ttttcaacga acaggtgcgc
    23701 tatgccttcc acggcgcatt gcaggatctg aaaagcaaac cgttcgccac gtttttaacg
    23761 gtgatggtta tcgccatctc cctgacgctg cccagcgtct gttatatggt gtacaaaaac
    23821 gttaatcagg cggcgacgca gtattatccg tcaccgcaaa tcactgttta cttgcaaaaa
    23881 acgctggacg atgacgccgc tgcgggcgtg gtggcacagt tgcaggccga gcaaggcgtg
    23941 gagaaagtga actatctttc tcgtgaagac gcactgggcg agttccgtaa ctggtctggt
    24001 tttggtggtg cgctggatat gctggaagaa aacccgcttc cggcagtggc ggtggtgatc
    24061 ccgaaactcg attttcaggg gacggaatca ctcaatacgc tgcgtgatcg tatcacgcag
    24121 attaacggca ttgacgaagt gcggatggat gacagctggt ttgcccgtct ggcggcgttg
    24181 accgggctgg tcgggcgcgt ttcggcgatg atcggcgtgt tgatggtggc ggcagtgttc
    24241 ctcgtcatcg gcaacagcgt acgtctgagc atctttgctc gccgtgactc catcaacgtg
    24301 cagaaactga ttggtgcgac ggatggtttc atccttcgcc cgttcctgta tggtggcgca
    24361 ctgctgggat tttctggcgc attgttgtca ttaattttgt cagaaattct ggtgctgcga
    24421 ttgtcatcgg cggttgcgga agtggcacag gttttcggaa cgaattttga tatcaatggt
    24481 ttatcgttcg atgaatgcct gctattgctg ctggtatgct cgatgattgg ctgggtggca
    24541 gcgtggcttg ccacggtaca acatttacgc cactttacgc ctgaataata aaagcgtgtt
    24601 atactctttc cctgcaatgg gttccgtagc agggaaagag atcccgttgt ctcttcccgg
    24661 tatttcatct ctatgtcaca ttttgtgcgt aatttattca caagcttgca ttgaacttgt
    24721 ggataaaatc acggtctgat aaaacagtga atgataacct cgttgctctt aagctctggc
    24781 acagttgttg ctaccattga agcgccagaa gatatcgatt gagaggattt gaatgactga
    24841 caaaatgcaa agtttagctt tagccccagt tggcaacctg gattcctaca tccgggcagc
    24901 taacgcgtgg ccgatgttgt cggctgacga ggagcgggcg ctggctgaaa agctgcatta
    24961 ccatggcgat ctggaagcag ctaaaacgct gatcctgtct cacctgcggt ttgttgttca
    25021 tattgctcgt aattatgcgg gctatggcct gccacaggcg gatttgattc aggaaggtaa
    25081 catcggcctg atgaaagcag tgcgccgttt caacccggaa gtgggtgtgc gcctggtctc
    25141 cttcgccgtt cactggatca aagcagagat ccacgaatac gttctgcgta actggcgtat
    25201 cgtcaaagtt gcgaccacca aagcgcagcg caaactgttc ttcaacctgc gtaaaactaa
    25261 gcagcgtcta ggctggttta accaggatga agtcgaaatg gtggcccgtg aactgggcgt
    25321 aaccagcaaa gacgttcgtg agatggaatc acgtatggcg gcacaggaca tgacctttga
    25381 tctgtcttcc gacgacgatt ccgacagcca gccgatggca ccggtgctct atctgcagga
    25441 taaatcatct aactttgccg acggcatcga agatgataac tgggaagagc aggcggcaaa
    25501 ccgtctgacc gacgcgatgc aaggtctgga cgaacgcagc caggacatca tccgcgcgcg
    25561 ctggctggac gaagacaaca agtccacgtt gcaggaactg gctgaccgtt acggtgtttc
    25621 cgctgaacgt gtacgccagc tggaaaagaa cgcgatgaaa aaactgcgcg ctgctataga
    25681 agcgtaattt ccgctattaa gcagagaacc ctggatgaga gtccggggtt tttgtttttt
    25741 gggcctctac aataatcaat tccccctccg gcaaaacgtc aatccccacg cagattgtta
    25801 ataaactgtc aaaatagcta ttccaatatc ataaaaatgg ggtatgtttt agcagagtat
    25861 gctgctaaag cacgggtagt catgcataaa acgaaataaa gtgctaaatc acaacaccac
    25921 aacacacgta ataaccagaa gaatggggat tctcaggatg aatataaagg gtaaagcgtt
    25981 actggcagga tgtatcgcgc tggcattcag caatatggct ctggcagaag atattaaagt
    26041 cgcggtcgtg ggcgcaatgt ccggtccggt tgcgcagtac ggtgaccagg agtttaccgg
    26101 cgcagagcag gcggttgcgg atatcaacgc taaaggcggc attaaaggca acaaactgca
    26161 aatcgtaaaa tatgacgatg cctgtgaccc gaaacaggcg gttgcggtgg cgaacaaagt
    26221 cgttaacgac ggcattaaat atgtgattgg tcacctctgt tcttcatcaa cgcagcctgc
    26281 gtctgatatc tacgaagacg aaggcatttt aatgatcacc ccagcggcaa ccgcgccgga
    26341 gctgaccgcc cgtggctatc agctgatcct gcgcaccacc ggcctggact ccgaccaggg
    26401 gccgacggcg gcgaaatata ttcttgagaa agtgaaaccg cagcgtattg ctatcgttca
    26461 cgacaaacag caatacggcg aaggtctggc gcgagcggtg caggacggcc tgaagaaagg
    26521 caatgctaac gtggtgttct ttgatggtat caccgccggg gaaaaagatt tctcaacgct
    26581 ggtggcgcgt ctgaaaaaag agaatatcga cttcgtttac tacggcggtt atcacccgga
    26641 aatggggcaa atcctgcgtc aggcacgcgc ggcagggctg aaaactcagt ttatggggcc
    26701 ggaaggtgtg gctaacgttt cgctgtctaa cattgcgggc gaatcagcgg aagggctgct
    26761 ggtgaccaag ccgaagaact acgatcaggt tccggcgaac aaacccattg ttgacgccat
    26821 caaagcgaaa aaacaggacc caagcggcgc attcgtttgg accacctacg ccgcgctgca
    26881 atctttgcag gcgggcctga atcagtctga cgatccggct gagatcgcca aatacctgaa
    26941 agcgaactcc gtggataccg tgatgggtcc gctgacgtgg gatgagaaag gtgatctgaa
    27001 aggctttgag ttcggcgtat ttgactggca cgccaacggc acggcgaccg atgcgaagta
    27061 atcattaatc ggcaactttg ggttgccgcc aaattgctaa tatcgagtac gttgcttcat
    27121 gccggatgcg gcgtaaacgc cttatccggc ctacaagatc caaagaaatc agtaaattgc
    27181 aacacacatt gtaggcctga taagcgtagc gcatcaggca atttctcgtt ggtcatcact
    27241 tttgaaatca acttgacgat taacgcttct cccagccgcc ctgttgcgcc gtaaatccca
    27301 gtgcctgcat aaacgccgtc atcacaccgc gatcttccac gcctgcatcc gccatccacc
    27361 agcatgaaac gccaggattg ttacgcaaaa cctcttccag cagatattgc cccacaccgc
    27421 gacgtcgggt gacttcccgc acacgcaggg aatccagtgc tccctcggtg ccgcttaagg
    27481 ttacccgtac ggcagcgagc aggcgctcgt taaaacgcgc ggcgtagata cggtggttat
    27541 cgtcaacctg taaagaggaa ggggaatact ccggccagat cttttgcagg tcaatccggt
    27601 cctggtcgct aaagttttct aatcgaatga tggtcagctt catgggtaac ccgtgtaaat
    27661 cacaaaagtg gaaccagtgt agcgaaataa tttaatcgga ggctttctct tttttatttc
    27721 ttttggcagg tgattaattt tttaacagca ataattacaa agttaaaaca ttagagaatg
    27781 aaaaataccc agcataatcc cctgaatggt agtgaattat tccgcccttt gtgccgttat
//
LOCUS       DAJVUK010000038        27675 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.038, whole genome shotgun sequence.
ACCESSION   DAJVUK010000038 DAJVUK010000000
VERSION     DAJVUK010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27675
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.038"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(211..420)
                     /gene="fumD"
                     /locus_tag="OQQ57_001547"
     CDS             complement(211..420)
                     /gene="fumD"
                     /locus_tag="OQQ57_001547"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HCS1956356.1"
                     /translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA
                     LANKRIQRSELDKQAMETVINALVK"
     gene            977..2389
                     /gene="pykF"
                     /locus_tag="OQQ57_001548"
     CDS             977..2389
                     /gene="pykF"
                     /locus_tag="OQQ57_001548"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase PykF"
                     /protein_id="HCS1956357.1"
                     /translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            2700..2936
                     /gene="lpp"
                     /locus_tag="OQQ57_001549"
     CDS             2700..2936
                     /gene="lpp"
                     /locus_tag="OQQ57_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein lipoprotein Lpp"
                     /protein_id="HCS1956358.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
     gene            complement(3000..4004)
                     /gene="ldtE"
                     /locus_tag="OQQ57_001550"
     CDS             complement(3000..4004)
                     /gene="ldtE"
                     /locus_tag="OQQ57_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HCS1956359.1"
                     /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
                     QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
                     AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
                     GIKLLPVVPAGPNNPLGRYALRFAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
                     ALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ
                     FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRARQ
                     "
     gene            complement(4153..4569)
                     /gene="sufE"
                     /locus_tag="OQQ57_001551"
     CDS             complement(4153..4569)
                     /gene="sufE"
                     /locus_tag="OQQ57_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HCS1956360.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSP
                     QNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            complement(4582..5802)
                     /gene="sufS"
                     /locus_tag="OQQ57_001552"
     CDS             complement(4582..5802)
                     /gene="sufS"
                     /locus_tag="OQQ57_001552"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HCS1956361.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTL
                     FDEKTRLLAITHVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTCLQRIHRLLG"
     gene            complement(5799..7070)
                     /gene="sufD"
                     /locus_tag="OQQ57_001553"
     CDS             complement(5799..7070)
                     /gene="sufD"
                     /locus_tag="OQQ57_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HCS1956362.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
                     KHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDAIE
                     GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMYITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
                     AFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            complement(7045..7791)
                     /gene="sufC"
                     /locus_tag="OQQ57_001554"
     CDS             complement(7045..7791)
                     /gene="sufC"
                     /locus_tag="OQQ57_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HCS1956363.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLAVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            complement(7801..9288)
                     /gene="sufB"
                     /locus_tag="OQQ57_001555"
     CDS             complement(7801..9288)
                     /gene="sufB"
                     /locus_tag="OQQ57_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HCS1956364.1"
                     /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
                     AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
                     CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            complement(9297..9665)
                     /gene="sufA"
                     /locus_tag="OQQ57_001556"
     CDS             complement(9297..9665)
                     /gene="sufA"
                     /locus_tag="OQQ57_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HCS1956365.1"
                     /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            complement(10213..10401)
                     /locus_tag="OQQ57_001557"
     CDS             complement(10213..10401)
                     /locus_tag="OQQ57_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiH family protein"
                     /protein_id="HCS1956366.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            complement(10501..10911)
                     /gene="menI"
                     /locus_tag="OQQ57_001558"
     CDS             complement(10501..10911)
                     /gene="menI"
                     /locus_tag="OQQ57_001558"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HCS1956367.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGIC
                     KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
     gene            complement(10908..13964)
                     /locus_tag="OQQ57_001559"
     CDS             complement(10908..13964)
                     /locus_tag="OQQ57_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HCS1956368.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDVLDTQPLPVELAETLGKSNTTIGRIYNTVY
                     QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCREL
                     AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPELDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
                     AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTL
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            14353..15465
                     /gene="ydiK"
                     /locus_tag="OQQ57_001560"
     CDS             14353..15465
                     /gene="ydiK"
                     /locus_tag="OQQ57_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HCS1956369.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            15651..15758
                     /gene="rprA"
                     /locus_tag="OQQ57_001561"
     ncRNA           15651..15758
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="OQQ57_001561"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            15894..16273
                     /locus_tag="OQQ57_001562"
                     /pseudo
     CDS             15894..16273
                     /locus_tag="OQQ57_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001014786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
     gene            16218..16940
                     /locus_tag="OQQ57_001563"
                     /pseudo
     CDS             16218..16940
                     /locus_tag="OQQ57_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310425.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            16952..17818
                     /gene="ydiB"
                     /locus_tag="OQQ57_001564"
                     /pseudo
     CDS             16952..17818
                     /gene="ydiB"
                     /locus_tag="OQQ57_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
     gene            17850..18608
                     /gene="aroD"
                     /locus_tag="OQQ57_001565"
     CDS             17850..18608
                     /gene="aroD"
                     /locus_tag="OQQ57_001565"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HCS1956370.1"
                     /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            18754..20349
                     /locus_tag="OQQ57_001566"
     CDS             18754..20349
                     /locus_tag="OQQ57_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HCS1956371.1"
                     /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT
                     TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI
                     SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE
                     DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN
                     GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLD
                     DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVET
                     GPIGGITSQGIAFGANVNTRAILDMTSQFNFYHGGGLDVCYLSFAEVDQHGNVGVHKF
                     NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLNIVQEGRVKKFIQELPEI
                     TFSGKIALERELDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPE
                     LKLMDERLFIDAAMGFVLPEAAH"
     gene            20363..21514
                     /locus_tag="OQQ57_001567"
     CDS             20363..21514
                     /locus_tag="OQQ57_001567"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HCS1956372.1"
                     /translation="MDFSLTEEQELLLASIRELITTNFAEEYFRTCDQNGTYPREFMR
                     ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA
                     EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK
                     EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV
                     EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH
                     NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI
                     QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK"
     gene            complement(21557..22468)
                     /locus_tag="OQQ57_001568"
     CDS             complement(21557..22468)
                     /locus_tag="OQQ57_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HCS1956373.1"
                     /translation="MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNET
                     ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ
                     GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL
                     YYENFKNAYRSEQGYIKKDVLIKDILFYLSNNYREKITLEQLSKKFRASVSYICHEFT
                     KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS
                     DYRRQFKNCFAEQEILSEFPQPVSLVG"
     gene            22782..23553
                     /locus_tag="OQQ57_001569"
                     /pseudo
     CDS             22782..23553
                     /locus_tag="OQQ57_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416212.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein"
     gene            23573..24511
                     /locus_tag="OQQ57_001570"
     CDS             23573..24511
                     /locus_tag="OQQ57_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="HCS1956374.1"
                     /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
                     MPYGPKCIYVLEQNDALQRTENYAESIAAPLKDKHPAMLLLAATKRGKALAARLSVQL
                     NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
                     QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA
                     VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI
                     VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
     gene            24567..25856
                     /locus_tag="OQQ57_001571"
     CDS             24567..25856
                     /locus_tag="OQQ57_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCS1956375.1"
                     /translation="MSDDKFDAIVVGADVASSVAALVMARAGLDVLVIERGDSAGCKN
                     MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
                     YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILQANVVVLAD
                     GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
                     GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
                     SAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
                     KEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYSRMVADIMNEMF
                     TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
     gene            25853..26146
                     /locus_tag="OQQ57_001572"
     CDS             25853..26146
                     /locus_tag="OQQ57_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HCS1956376.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
     gene            26203..>27675
                     /gene="fadK"
                     /locus_tag="OQQ57_001573"
     CDS             26203..>27675
                     /gene="fadK"
                     /locus_tag="OQQ57_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310435.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium-chain fatty-acid--CoA ligase"
                     /protein_id="HCS1956377.1"
                     /translation="MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVV
                     DNHGATYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVS
                     VPLLPSWREAELVSVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKL
                     APATSSLSLSPIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASER
                     AYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQ
                     RCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVY
                     GSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNV
                     FMGYFDEPELTARALDEEGWYCSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVE
                     DILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLSL"
BASE COUNT         6906 a         7001 c         6802 g         6966 t
ORIGIN      
        1 aactgatatt tattatcatt tgaaataaat ttaacttaag cgacaattat ttgtgacgtt
       61 cattgcagaa aataaaaata atattatcgt tataaattaa aatacatacc gcaattcgta
      121 taatttcagc agttgttatt tagaatgatt aactggaccg caactgaagc aagaatatca
      181 ggatgaagct taccgcctca tcctgaatgg tcattttacc agtgcgttaa tgacggtttc
      241 catcgcctgc ttatccagct cactgcgctg aatgcgttta ttggctaatg ctgtacgtaa
      301 tacgcctgcg ataacaatat gctttggttc ctgccccaga tcgcgcattt ccagcacaac
      361 tttaccgaca actctgcaca tttctcggta cagttcatcc tcttttgtcc gatttcccat
      421 tctttatacc tatttatcat gccaactatc agcatatatc aatctaacca attaaacaaa
      481 aatcaaacaa aatcagacaa ataacgcgat aaattatttt aactgtagca attgagcgat
      541 gatatattta tacaccggat gaactttcac ttatcctcac actgacaact ttggcaccag
      601 acgttgcgca aacagcgaag tttttgcgta accttttccc tggaacgtta aatctttgat
      661 aacaatttat tgtctaacaa gttgtatatt ttttgaaacg ctgtttttgt tttccttttg
      721 gattaatttc agcgtataat gcgcgccaat tgactcttga atggtttcag cactttggac
      781 tgtagaactc aacgactcaa aaacaggcac tcacgttggg ctgagacaca agcacacatt
      841 cctctgcacg ctttttcgat gtcacttatc cttagagcga ggcaccacca ctttcgtaat
      901 accggattcg ctttccggca gtgcgcccag aaagcaagtt tctcccatcc ttctcaactt
      961 aaagactaag actgtcatga aaaagaccaa aattgtttgc accatcggac cgaaaaccga
     1021 atctgaagag atgttagcta aaatgctgga cgctggcatg aacgttatgc gtctgaactt
     1081 ctctcatggt gactatgcag aacacggtca gcgcattcag aatctgcgca acgtgatgag
     1141 caaaactggt aaaaccgccg ctatcctgct tgataccaaa ggtccggaaa tccgcaccat
     1201 gaaactggaa ggcggtaacg acgtttctct gaaagctggt cagaccttta ctttcaccac
     1261 tgataaatct gttatcggca acagcgaaat ggttgcggta acgtatgaag gtttcactac
     1321 tgacctgtca gttggcaaca ccgtactggt tgacgatggt ctgatcggta tggaagttac
     1381 cgccattgaa ggtaacaaag ttatctgtaa agtgctgaac aacggtgacc tgggcgaaaa
     1441 caaaggtgtg aacctgcctg gcgtttccat tgctctgcca gcactggctg aaaaagacaa
     1501 acaggacctg atctttggtt gcgaacaagg cgtagacttt gttgctgctt cctttattcg
     1561 taagcgttct gacgttatcg aaatccgtga gcacctgaaa gcgcacggcg gcgaaaacat
     1621 ccacatcatc tccaaaatcg aaaaccagga aggcctcaac aacttcgacg aaatcctcga
     1681 agcctctgac ggcatcatgg ttgcgcgtgg cgacctgggt gtagaaatcc cggtagaaga
     1741 agttatcttc gcccagaaga tgatgatcga aaaatgtatc cgtgcacgta aagtcgttat
     1801 cactgcgacc cagatgctgg attccatgat caaaaaccca cgcccgactc gcgcagaagc
     1861 cggtgacgtt gcaaacgcca tcctcgacgg tactgatgca gtgatgctgt ctggtgaatc
     1921 cgcaaaaggt aaatacccgc tggaagcggt ttctatcatg gcgaccatct gcgaacgtac
     1981 cgaccgcgtg atgaacagcc gtctcgagtt caacaatgac aaccgtaaac tgcgcattac
     2041 cgaagcggta tgccgtggtg ccgttgaaac tgctgaaaaa ctggatgctc cgctgatcgt
     2101 ggttgctact cagggcggta aatctgctcg cgcagtacgt aaatacttcc cggatgccac
     2161 catcctggca ctgaccacca acgaaaaaac ggctcatcag ttggtactga gcaaaggcgt
     2221 tgtgccgcag ctggttaaag agatcacttc tactgatgat ttctaccgtc tgggtaaaga
     2281 actggctctg cagagcggtc tggcacacaa aggtgacgtt gtagttatgg tttctggtgc
     2341 actggtaccg agcggcacta ctaacaccgc atctgttcac gtcctgtaat attgcttttg
     2401 tgaattaatt tgtatatcga agcgccctga tgggcgcttt ttttatttaa tcgataacca
     2461 gaagcaataa aaaatcaaat cggatttcac tatataatct cactttatct aagatgaatc
     2521 cgatggaagc atcctgtttt ctctcaattt ttttatctaa aacccagcgt tcgatgcttc
     2581 tttgagcgaa cgatcaaaaa taagtgcctt cccatcaaaa aaatattctc aacataaaaa
     2641 actttgtgta atacttgtaa cgctacatgg agattaactc aatctagagg gtattaataa
     2701 tgaaagctac taaactggta ctgggcgcgg taatcctggg ttctactctg ctggcaggtt
     2761 gctccagcaa cgctaaaatc gatcagctgt cttctgacgt tcagactctg aacgctaaag
     2821 ttgaccagct gagcaacgac gtgaacgcaa tgcgttccga cgttcaggct gctaaagatg
     2881 acgcagctcg tgctaaccag cgtctggaca acatggctac taaataccgc aagtaatagt
     2941 acctgtgaag tgaaaaatgg cgcacattgt gcgccatttt ttttgtctgc tatttaccac
     3001 tactgcctcg cgcgtaacat attcccttgc tctggttcac cattctgcgc tgactctact
     3061 gaaggcgcat tgctggctgc gggagttgct ccactgctca ccgaaaccgg ataccctgcc
     3121 cgacgataca acgctttatc gactaacttc tgatctacag ccttattgtc tttaaattgc
     3181 gtaaagcctg ctggcagtgt gtatggcatt gtctgaacgt tctgctgttc ttctgccgat
     3241 agtggtcgat gtacttcaac ataacgcatc ccgttaggct ccacggaata tttcaccggt
     3301 tcgttgatca ctttcaccgg cgttcccgtc cgcacgctgg agaataaggc tttaatatcc
     3361 ggtgcattca tgcgaataca gcccgaactg acgcgtaaac cgacgctgtc cggcgcactg
     3421 gtaccatgaa tgaggtattc gccattacca tgcgcgaagc gcagtgcgta acgtcctagc
     3481 gggttatttg gtccggcagg aacgactggc agtaatttaa tgccacgctc cagcgaacgt
     3541 tgacgaatgc ctgccgtagg cgtccaggtt ggattaggga ttttctgccc cacacgcgtt
     3601 tccatcaccg gcgtttccag cccctgcaag ccaataccta tcggataaac ctgcacgata
     3661 ttttctcccg gcggataata ataaaggcgc agctctgcaa ggttaacgat aatcccctga
     3721 cgcggtgcat caggtaataa cagttgtgaa ggaatagtta tcgtcgtacc aggttttggc
     3781 accggggcga tagtgttatt ggcttcaagg atcaacattg ccgcagtatc aaaacgtcgg
     3841 gcaatagcct gaaggttttt atccccttct tgcaccgtat acgtttgatt ttgcccaacc
     3901 agtcggcttc cggttggtgg tagcggataa tcaaccgccc aggcagcctg gatggcgcta
     3961 aaagcgccga taagcgtgag tgtaagcaaa gacgcgcgtt tcattgtaaa cctcctgtat
     4021 ttgccggaga ctcacgctga aacgtcggat ggcgcttatg ttcacctgaa accaaaacac
     4081 tcctgtgcag gtcagtgtaa acattgacca tccggcaatg tgagccaacc ggatgaaagc
     4141 tgtcccttta gtttagctaa gtgcagcggc tttggcgcga attgcgcgaa tcatcgcttc
     4201 cagaccttgt gaacgagatg gggtgagatg ttgggtgagc gccatttttt caaaccacgg
     4261 acgcacatcg aaattgacaa tatcctgcgg cgtcatctga tcgtagagaa taaatacgac
     4321 cgcaataagc cctttcacaa tcgccgcatc gctgtcgccc tgcaattcaa taattccctg
     4381 cgcattctgg cgcatgacaa tccacacctg attctggcag ccctgaatgc tattttgtgg
     4441 gcttcggtct tcgtcgcgta attctggcag acgctggccc agctcaataa tgtagagata
     4501 tttctcttcc cagttggcgc agcgtaaaaa attacgcagc aatttttctt tatccggcaa
     4561 taaagccata gtgcctccct gttatcccag cagacggtga atacgttgca ggcaggtcac
     4621 cagacgatcc acttcttcat gagtgttata catggccagc gacgcccgac acatcgcagg
     4681 gacgttgtaa taggccatta atggcatagc gcagtgatgt ccggtacgca cagcaatgcc
     4741 gtaattatcg agaaaactgc caacatcata ggcgtggtgt ttaccgagat taaaagcaat
     4801 aacgccaagc ctgttttgtg ggccatagag agtgagattc ggtacagatt ccagctgtga
     4861 tagcgcgtaa tgcatcagat tcagttcata ctcggctatg ttattaagcc ccagcaccga
     4921 aacatattcc agcgccgcgc caagaccaat gatgcccccg gtattgggtg taccggcttc
     4981 aaaccgccat ggtgctttgg tccaggtagt gccttcactc aggctgacgg tggcgatcat
     5041 agaaccgccc ccttcccacg gcggcatctc ctgcaacaag gcttctttga cataaagaat
     5101 gccaatcccg gtggggccat acagtttatg cccggaaaac acgtaaaaat cgcaatccag
     5161 cgcctgaaca tccaccggat gatgcatcac cgcctgagcg ccatccacca gcacttttgc
     5221 gccatgctgg tgcgcaagcg tgatcattcc cgccagtgga ttttctgtgc caagcacgtt
     5281 ggagacatga gtaattgcca gcaggcgagt tttctcatca aacagcgtat gcagcgtctc
     5341 cagttgcagc gtaccgtcgg ggttgagagg gatcacacgc agctctgcgc caacgcgtgc
     5401 gcaaagcatc tgccagggga caatgttagc gtggtgctcc atctgactga tgatgatgtt
     5461 atcgcccgcc cgcacattgc tgttgcccca gctattggcg accagattga tcccttccgt
     5521 cgtgccgcgg acgaacacca gctcttccgc cgaacgggca ttaataaaca gcgatgcccg
     5581 cttgcgcacg ttctccattt tctcggtcgc ctgggcgctt aaggtatgaa taccgcgatg
     5641 caccgccgcg tagccatgac gataaaactc ggcctcggcg tcaatcacct ggctcggttt
     5701 ctgtgcactg gcggcgctgt cgagataagc cagcggcaaa ccgtttacct cacgcgaaag
     5761 caccggaaag tcggcccgca ctttgtcgac ggaaaaagtc atcttgcacc tcctggcagc
     5821 cgttgaccga ttcgggccag cacctgctgt ttaagcccct catcacgcag tgcttccgtc
     5881 agttcggcag caaaggcgta aatgatcatc tgctgggcat cctgctgatt gatcccgcgc
     5941 gagcgcagat agaacatctg ttcatcatca atacgcccca ccgtcgcgcc gtggctgcat
     6001 ttcacatcat ctgcatagat ttccagctgc ggtttcgtat ccacttccgc cagtttgccc
     6061 atcagcagat tattgttggt catctgacca tccgttttga tggcgtgctg cgcgacgttg
     6121 atcaaaccgt taaataccgc gcggcctttg tcgctgacga tagttttgtg caactgtcgg
     6181 ctgttacaaa aacctttatt gtgttccagc caggtacggg tatcacacac ctcgtttttc
     6241 accggcatcg ccaggctatt gatccgcagc gtgctgtttt cgccattgag ttgcgtactg
     6301 gtgttgtgtc gtaacactgc gccacccagc aggaaactat ggctaaatgc ggtggcatcc
     6361 tcagccagca acaaatcgtt atgagcaaag tggtgactga gcgggttttc aaacgccagc
     6421 ttgatatgct gcaagtgggc gttcgctgcg acattgatag tgaaccgtgc cccggtaaaa
     6481 tgacgagcat cattaaggct gacaaaatgt tcgatcaccg ttgcttcggc accttccgcc
     6541 agatccagat gatgccggta atgggcagtg ttcacctctt cacctgccac gccctgggtg
     6601 atatacatta acagcaatgg ctttgccggc cgttgaccgc gcttcacggc gatatgcgtc
     6661 acgctttgtg ccaggctttc cgtcaaatgc agaaacactt ccgcctgaat agcgtcgggt
     6721 aacccctgac ggtcgtcgtt aatgctcact tcatatccgc tgccttcaat tgcatcgctc
     6781 agcgcgggca cgtaacgtcc atcgacaaac accagccgca cggcgtctaa cgttaacgct
     6841 aaggcatcac gctgctgtgg ggatatctcc cccgcaatgc tgacaaactg gctattggtc
     6901 agcccttcca gcgacgtata tttccagttt tcatgtttac gtgtcggcag tccggtacgc
     6961 agcaattgtt gtaaatgctg ctgtgcttgc ggggagcgtt ttgtcccttc agcttcaaac
     7021 aagtgatgcc actgttgcag cgcgttactg ctgttcggta agccagccat aaccctgctc
     7081 ctccagttgt ttgaccaacg tgaaatcgcc ggatttcaca attcgtccct gatatagcac
     7141 atggacgtaa tcaggcttga tgtagtcgag aatgcgttgg tagtgcgtaa caatgatgaa
     7201 tgagcgcttg ccatcacgca gggagttcac gccatcggcg accactttta atgcgtcaat
     7261 atccagcccg gagtccgact catcaagaat gcataactcc ggttccagca ccgccatttg
     7321 caaaatatcg ttgcgctttt tctcgccgcc ggaaaaacca acgtttaccg aacgggttaa
     7381 taaatcttcc ggcatcttca ggagagcgat tttctcttcc atcaaatcct gaaaatcaaa
     7441 gcggtcgagc gtttcctggc cgcgatagct gcgcactgca ttaagtgccg tttgcaggaa
     7501 aaactggtta ctgacgcctg gaatctccac cggatactgg aaggccataa agatgccttc
     7561 gcctgcacga tcttccggcg acagtgcaag caaatctttg cctttgaact caaccgtgcc
     7621 gcccgtcact tcataatctt cgcgcccggc aagcgttgcc gataaggtac ttttgcccga
     7681 accgtttggc cccataatgg cgtgaacttc gccgggacga acggcgaggc ttaatccacg
     7741 caggatagct ttatcttcca cgctgacgtg taaatcttta atacttaaca tgtttattcc
     7801 ttatccgacg ctgtgttcaa gactgatcgc gaggagtttt tgtgcttcaa cggcaaattc
     7861 cagcggcagt tctgagaaca cgtctttgca gaaaccgtta acaatcatcg agatggcgtc
     7921 ttcttcgctg atcccgcgtt gcaggcagta aaacagttga tcttcaccaa tacgtgatgt
     7981 cgttgcctcg tgctccagtt gtgcgctgtt attgcgacat tcgacatacg ggaaggtatg
     8041 cgccccacaa ttagcgccaa tcagcattga gtcgcactga gtgaaattgc gcgcattggt
     8101 tgccgtcggc atgattttca ctaagccgcg ataactgttc tgactatgtc cggcagagat
     8161 ccctttcgag ataatggtcg atttggtgtt tttaccgatg tggatcatct tggtgccggt
     8221 atccgcttgc tgatgaccgc tggtcagcgc cactgagtaa aactcaccaa tggagttatc
     8281 gccgcgcaaa atgcagctgg gatatttcca cgtaatcgcg gacccggttt ctgattgcgt
     8341 ccatgacatt ttgctgtttt cgccttcgca caaagcacgc ttggtgacga agttgagaat
     8401 accgccggtg ttgttatcgc cagggaacca gttttgtacc gtggaatatt tcacctcggc
     8461 gtttttatgg atgatgactt ccaccactgc cgcgtgtaac tgatagctgt cacgcaccgg
     8521 agcggaacag ccttcaatgt agctgacgta gctgtcttcg tcggccacca gaatggtgcg
     8581 ctcaaactgc ccggtttttt ccgcgttaat gcgaaaatag gtggaaagtt ccatcgggca
     8641 gcgcacgcct ttaggcacat aaataaacgt accgtcagag gctaccgccg cattaagcgc
     8701 ggcaaagaag ttgtcattcc ccggcaccac ggtgccgaga tatttacgca ccagttccgg
     8761 gtgatcgtgg atcgcctcac caaaggaaca gaaaataatt ccctgctccg ccagtttttc
     8821 gcgataagta gtggcaaccg aaacagagtc gaaaatggca tccaccgcca cctctttgcc
     8881 ttcccgcacg ggaacgccca actgctcaaa cgccgcctcc acctctttac ttaaaaaggc
     8941 gttcgcgcca gtttgctgca ccgcgccagg ttcagacgcg caagtgtcgt cacaattacc
     9001 gcacgatggt gctgagtagt agctgtaatc ctgataattc agcttgtcgt agtgcgcttt
     9061 caaccagtgc ggttcttcca tctccagcca tgcgcgatag gcgtttagac gaaactccag
     9121 catccactcc ggctcattac gcttcgccga aattgcgcgc accacctctt cgtttatccc
     9181 ctttgccagc tcatcggtgg ctaactgggt gaagaatcct tctttataat tcagcgggcc
     9241 gccggtccag gttttgacat cgtcagttgc ttcagtatta cgagacatag taccgcctat
     9301 accccaaagc tttcgccaca gccacattca ttctgggctt tagggttgtg aaatttgaat
     9361 atctgattaa gtccttcacg aacgaaatcg acttccgtgc catcaataaa cggcatcgct
     9421 tgcagcggga caaacagctt cgcgccgtcg tgttcaaaca gcagatcgtc tttgtccggc
     9481 tcgctaacac tgtcgagcac atagccaaag cccgcgcagc ccgtttgctt cacgcctaaa
     9541 cgcacgccga ccatacccgg ctgctttgcc accagctcac ggatgtgtat cgccgctgcg
     9601 ggtgtcagcg ttaagccttg ccaggcgaaa tcttgtgggt taaaggttcc tgaatgcatg
     9661 tccatcgatt tacctcactt catcgctttc agcgtataac agcatgttgg tgataatgat
     9721 tatcagttca acccagcaaa cgcaggggct ttaccgtaaa acatgctttt tgcctgcttt
     9781 taataagcat agaccctgat gtgtgggtta acaggcacgc taagaattag cgtatctcat
     9841 tgttagataa tggttattat ctaaggagca ttaaggctgt gatgaaaaag aaaaagttgt
     9901 attaaaatga ctatttaaga gataggtaaa aaagtgcagc gttcagaaat aagaaaaccc
     9961 ttaagtctgt gcgacacagg cttaagggtt tctaccccat ccggcgctta tctccggcac
    10021 tctcagtggc ttagctcttg aaggggcgat aagaataatc tcataaagct aacccgccgt
    10081 tttaacacaa actgcgatta gtattatttt tgaacaatat caggcggtag ataagcagta
    10141 ttaagaaggt catcgaacct ggacggaggt taatccaggt cgatttggcg aacttgcggc
    10201 attaagtcag gatcaatgca cgcccagacg ccaggcaaag tagatttctt cttttaattc
    10261 agcagaagag agagtaagca ggtcagcaaa ttcaagttct agttgtttca gacgtttgag
    10321 atattgggca ggtgaaagat tgctctggtc acggcgtaaa aattcaatgg ccagctgggt
    10381 gggatcaagt tgagtagaca tagcatcctc gcttttagac aagacgtgta cagtatacca
    10441 ccgtttactg tgcagataat gaccaaaagc aatatgcgtc acacttttct ggtgacaacg
    10501 tcacaaaatg gcggtcgtca atcgtgacga acagcacaaa cgccctttct catcgaagat
    10561 ttcaatctgc cagacctggt gacgcgaacc gagatgcaac ggtttacata tgccgcgcac
    10621 ccgcccttct cgtgccgagc ggacgtgatt agcattgatt tccagaccaa ccactttttg
    10681 ctcaccttcg gtacataaat aaccggcaac ggaaccgata ctttcggcca gtaccacgga
    10741 tgctcctcca tgcagcaacc cgaaaggctg ctttgtccgc gagtctactg gcattgtcgc
    10801 ttcaagggtg tcatcaccaa tatgttcaaa gcgaatatcc aggaacccca ccatgtttcc
    10861 ttcacccata gcattcagtg cttccagggt gattttccgt ttccatatca tttaataatc
    10921 tccagtaaag cctgcacagg atggcgtacc cccgtgcctt caacccgttt tacctggcta
    10981 cggcaggaat atccggtcgc cagacagcgg ttacgcggca gtcgctgcat agcctgatgc
    11041 caggataact catagatccc gagcgaattt tcatggtttt tcgcttcatg tccgtaagtc
    11101 cctgccatgc cgcagcaacc cacgctgaca ttttccagtt tcgcgccaaa acgggcaaat
    11161 atcgcggccc attgtgctgg cgcacccggc aaggcggtaa cttcggtaca gtgaccaaag
    11221 aaataccatg attcaccgct gactgtagcc acaggctgtg actcaagtgc gcttgccagc
    11281 cattcattcg ccagtaagac gttaaactcg ccacgctcct cgcccagcgc cagtttatat
    11341 tcatcgcgat aacaaagtac cagcgccgga tcgacgccca ccattggcat acccagcttc
    11401 gccatacggt tgaggaaatc cgccgtcttt ttcgccgtct tcgcaaaacg attaagaaaa
    11461 cctttaatat gctgggcttt gccatttggc gaaaatggca gtaacacagg ctggaaacct
    11521 aatttttcga ccagacggac aaaatccgcc accacttgcg catcgtaata gctggtaaag
    11581 gggtcctgca ccaccaacac tgtgcgcgct ttctgctctg cattgagaga ttcaagctgt
    11641 tccagcgtca tgtttgccga gcgatgcccc accatttgtt gttgtagcga ggggaccgac
    11701 agcagcggca aatcaaccat gccgatatgt ttttccgaga gtttgcgcac cagcggctgg
    11761 ttaatgaaga agttaaaggt tttcggcgcg cgtgccatca gcggcgcgta gctctcgacc
    11821 gtagcgacga ggtggtcgcg cagcgggcgt aaataacggg tgtgatagag ctgcagaaaa
    11881 cgagagcgaa actccggcac atcaattttg atggggcaca gggtcgaaca cgctttacag
    11941 gccagacagc ccgacatcgc ctctttgact tcgtgtgaga agtcatattc gcctttattc
    12001 gcatgccagc tattgcgcgt gcgggcaatt aacgtccgca aactgacgcc ggattcaggc
    12061 agttcttgtt ccagtttgag tggatcaacg ccgcgatccg ccaacaaacg cagccattca
    12121 cgcaccagcg ttgcgcgccc tttcggtgaa tgaatccggt tctgggtgat cttcatcgac
    12181 ggacacatcg gactacgggc atcaaagttg aagcataaac cgttgccgtt acactccatc
    12241 gcaccgcgcc actgctggcg taccgcaatg gggatctgcc gatcgaatgt accgcgcttc
    12301 accgcgtcca ctttcatcat cggcgcatcg agaccttctg gcgggcaaat cttccctggg
    12361 ttgagtcggt tatgcgggtc aaatgccgct ttcactttgc gcagttctgc aaaaagttcc
    12421 tcaccgaaaa acgccgggct gtattcagcg cgaaaacctt tgccgtgctc gccccacaac
    12481 aaaccaccgt atttcgcagt cagcgccacc acgtcatcag agatttgctt catcaaaatc
    12541 tcttgttgag gatcgcacat atccagctct ggacggacgt gcaagacacc tgcgtcgacg
    12601 tgaccgaaca taccgtagct taagccgtgg ctgtcgagca gcgcgcgaaa ttcagcaata
    12661 taatccgcca ggtgttccgg cggtacgcag gtatcctcag caaacggaat tggcttagcg
    12721 gcacctttgg cattgccaag cagaccaacg gcttttttgc gcattgcata gatacgttca
    12781 acccccgcca gctcacggca cacctgccag ccgatgacac ctgcttgatg actggcgatc
    12841 agctcatcca accgcgcaca gagtgcattt acccgctcat caatcagcgc ctcatcatca
    12901 ccagcaaatt ccacaatgtt cagcccgagc atctcttggt caggcacatc ggtaatcaac
    12961 tcgctgacgg aatgccagac aatatcttcc cgcgccagat tcagcacttt tgagtccacc
    13021 gtctctaccg aaagcgcccg cgcctcaacc ataaacggcg cgttacgcag cgcagagtca
    13081 aaagagtcat atttgacgtt caccagacgg cgcactttag gcaagcgcgt aatatccagc
    13141 cgcgcttcgg taataaaggc cagcgtccct tctgaacccg tcagaatgcg cgtcaggtcg
    13201 aactcggtca tctcatcgtt aaagacatga cgcagatcgt aaccggtaag aaagcggtta
    13261 agtttgggga agttgtcgat aattaactgg cgttgctgac ggcaacgttg ataaaccgtg
    13321 ttataaattc gcccgattgt ggtattggat ttacccagcg tttccgccaa ttcgacgggt
    13381 aaaggttgcg tatcgagaac atcgcccccc aacaacaccg cgcgtacgcc aagtacgtga
    13441 tctgacgttt tgccatagac cagcgatccc tgaccggatg catcggtatt gatcatccca
    13501 ccgagcgttg cccggttgct ggtcgaaagt tccggcgcaa aaaagtagcc gaacggtttc
    13561 aggtactgat tgagttgatc ttttatcacc ccggcctcaa cgcgcaccca gccctcttca
    13621 gggttaattt cgatgatgcg gttcatatgg cgggacatat caacaataat cccctggttg
    13681 agcgcctgac cgttagtgcc ggtgccgccg ccgcgggggg taaagatcag cgatgaatag
    13741 cgttcctgcg cggcaagacg ggcgatcagc gccacatctg cggttgaacg cggaaatacc
    13801 accgcatcgg ggagaagttg gtaaatactg ttgtcggtcg acattgtcag acgatcggca
    13861 taacttgtcg ccgtatcgcc ggtaaaacct tgttgctcca gctcttgcaa aaaattaagc
    13921 accagttgaa cgacgccggg tgcctgagaa atctgtggaa tcattatatt gcccctttcc
    13981 tgcggtctgt gatgtaggtc gatacactat tctttcaggc ggctgcaata gcgcactgaa
    14041 aggtgatgtt tatttactct atggatttcg agttgcagga aggcggcaag cgagtgaact
    14101 ccaggagctt acaatagtaa gtgactgggg tgaacgaacg tagccgcagc acatgcaact
    14161 tgaaatacga cgagtaaatc gtttgcgtgt tgcctgagtt gttgtaccac atttttttct
    14221 aacacgccca tcagaattaa gggcagaatc ggcctgttaa aaaccgctga aattgctcat
    14281 cattatgcag gtgagtttcg cgtgttcacg tcgcgtcgac gatttgacgc acaaaaaagg
    14341 tgaaaagtag ttatggtaaa tgttcgtcag cccagggatg tcgcacaaat tctgctttcg
    14401 gtgctgtttt tagccatcat gattgtggca tgtctgtgga ttgttcaacc ctttattctc
    14461 ggctttgcat gggccggtac ggtggttatc gccacctggc cggtattgtt acgtttgcaa
    14521 aagatcatgt ttggccgccg ctctctcgcc gttctggtga tgacgctgtt attagtgatg
    14581 gtgtttatca tccctattgc tttgctggtt aacagtatcg tcgacggcag cggcccgcta
    14641 attaaagcca tttccagcgg cgacatgacg ttacccgatc tggcgtggct taataccatt
    14701 ccggtgattg gcgcgaagct gtatgcaggc tggcacaact tgctggatat gggggggacg
    14761 gcgatcatgg cgaaagtccg cccttatatt ggcaccacca ccacctggtt cgttgggcag
    14821 gcggcgcata tcgggcgctt tatggtgcat tgtgcgctga tgcttctctt cagtgccctg
    14881 ctgtactggc gcggtgaaca ggtggcacaa ggcattcgcc attttgcaac ccgtctggca
    14941 ggcgttcgcg gagatgccgc cgtactgctg gcggcacagg ctatccgcgc ggtggcgctg
    15001 ggtgtggtgg tgacggcgtt agtacaggca gtgcttggcg gtatcggcct cgccgtatcc
    15061 ggcgtacctt atgcaacgtt gctaacggtg ttaatgatcc tctcctgcct tgtccagctt
    15121 ggcccgttgc cggtactgat tccggcgatt atctggctct actggactgg cgataccacc
    15181 tggggaacgg tattgttagt gtggagcggt gtggttggca cgctggataa cgtcatccgc
    15241 ccaatgttaa ttcgcatggg tgccgattta ccgctgatcc tgatcctctc tggtgttatt
    15301 ggtggtttga ttgctttcgg gatgatcggt ctgtttattg gtccggttct gttagccgtt
    15361 tcctggcgtc tgtttgccgc gtgggtggaa gaagtcccgc cgccgacgga ccaaccggaa
    15421 gaaattctcg aagaacttgg cgaaatcgag aaaccgaata agtaatttct catcaggcgg
    15481 ctctgccgcc tgattgttaa cccccgctaa ttgatatttg cttgctcttc cccatatttt
    15541 cctgcttacc gccattcagc tggtagtacc tgtcgcaaat tctttacagt ttttaaacta
    15601 atgagacgaa tctgatcgac gcaaaaagtc cgtatgccta ctattagctc acggttataa
    15661 atcaacatat tgatttataa gcatggaaat cccctgagtg aaacaacgaa ttgctgtgtg
    15721 tagtctttgc ccatctccca cgatgggctt ttttttaaca tttttccact tcgctacctc
    15781 gcccctcact ctttccaata atgttgcaca agatactgtg actctcttca agccgtcagc
    15841 aggctgataa tgttatttat attttattgt ttatttcatg cagccattac acgatgaacg
    15901 cttatgaact ccaggcactc cgacatattt ttgccatgac tattgatgaa tgcgcacctg
    15961 gattgcccag accggtgaca gtgaaagctg gcgtcagtgg gaaaatggca agtgtgccat
    16021 tcctgatcgt gtagtcgagc aactgttggc tatgcgtcag caaagaaaaa aacatcttca
    16081 tgccatcata gagaaaataa ataaccgcat cggcaacaac accatgcgtt ttttccccga
    16141 cttaaccgca tttcaacgag tctaccctga tggcaatttt attgactgga agatctatca
    16201 atcggtagcc gctgaaggta atgctgttga aaagcaaatt ccccagccag ttggtggacg
    16261 ccagcgtagc taatgaatta ccgcaaatga acagcaaacc gttagtctgg ctggaaggtg
    16321 tttcatcggt actgttcggt gtagccgcat tctcgacctt ttatgtgatt gtggtgtgga
    16381 tgcccaaata tgcgatggct tttgctggta tgtcagaagc tgaggcatta aaaaccatct
    16441 cttattacag tatgggctcg ttggtctgtg tctttatttt tgccgcacta ctgaaaaaaa
    16501 tggtccggcc catctgggct aatgtattta actctgcact ggcaacaata acagcagcca
    16561 ttatctatct gtacccttct ccactggtgt gtaatgccgg cgcctttgtt atcggtttct
    16621 cagcagctgg cggcatttta cagctcggtg tttcggtcat gtcagagttt ttcccaaaaa
    16681 gcaaagccaa agtcaccagt atttatatga tgatgggtgg actggctaac tttgttattc
    16741 cgctgattac cggttatctg tcgaacatcg gccttcaata tatcattgtt ctcgatttta
    16801 ctttcgcgct gctggccctg attaccgcaa ttattgtttt tatccgctat taccgcgttt
    16861 ttattattcc tgagaatgat gtgcggtttg gcgagcgtaa atttagcacc cggttaaaca
    16921 caattaagca tagaggttaa aggagttaat tatggatgtt accgcaaaat acgaattgat
    16981 tgggctgatg gcctatccta tccgccacag tttatcgcct gaaatgcaga ataaagcctt
    17041 agaaaaagcg ggattgccat ttacctatat ggcctttgaa gtggataacg atagttttcc
    17101 cggagcaatt gaaggattaa aagctctaaa aatgcgcgga actggtgtat caatgccgaa
    17161 caaacaactg gcttgttaat atgttgatga attaacgcca gcagccaaac tggtgggtgc
    17221 catcaacacc atcgttaatg atgatggcta cctgcgcggc tataacaccg acggcacggg
    17281 ccatattcgc gccattaaag agagcggttt tgatatcaaa ggcaaaacaa tggtgctgtt
    17341 aggggccgga ggtgcctcaa cggctattgg cgcgcagggg gcaattgaag gtttaaaaga
    17401 aattaaactc tttaaccgtc gggatgagtt cttcgataaa gccctcgcct tcgcgcagcg
    17461 ggttaacgaa aacaccgatt gtgtcgtcac ggttaccgat ctcgccgatc agcaagcctt
    17521 tgctgaagcc ctggcttccg ccgacatttt aaccaatggc acaaaagtgg gtatgaaacc
    17581 ccttgagaat gaatcattag ttaatgatat cagtctgtta catccgggac ttctggtcac
    17641 tgaatgcgtg tataacccgc atatgacgaa gttattgcag caggcgcaac aagctggttg
    17701 caaaacgatt gatggatacg gcatgttgtt gtggcaaggg gctgaacagt tcacgttatg
    17761 gactggcaaa gatttccctc tggaatatgt taaacaggtc atggggttcg gtgcctgaca
    17821 ggctgaccgc gtgcagaaag ggtaaaaaaa tgaaaaccgt aactgtaaaa gatctcgtca
    17881 ttggtacggg cgcacctaaa atcatcgtct cgctgatggc gaaagatatc gcccgcgtga
    17941 aatccgaagc tctcgcctat cgtgaagcgg actttgatat tctggaatgg cgtgtggacc
    18001 actttgccga cctctccaat gtggagtctg tcatggcggc ggcaaaaatt ctccgcgaaa
    18061 ccatgccaga aaaaccgctg ctgtttacct tccgcagtgc caaagaaggc ggcgagcagg
    18121 cgatttccac cgaggcttat attgctctca atcgtgcagc catcgacagc ggcctggttg
    18181 atatgataga tctggagtta tttaccggcg atgatcaggt taaagaaacc gtcgcctgcg
    18241 cccacgcgca tgatgtgaaa gttgtcatgt ccaaccatga cttccataaa acgccggaag
    18301 ccgaagaaat cattgcccgt ctgcgcaaaa tgcagtcctt cgacgccgat attcctaaga
    18361 ttgcgctgat gccgcaaagt accagcgatg tgctgacgtt gcttgccgcg accctggaga
    18421 tgcaggagca gtatgccgat cgtccaatca tcacaatgtc aatggcaaaa actggcgtaa
    18481 tttctcgtct ggctggtgaa gtatttggct cggcggcaac ttttggtgcg gtaaaaaaag
    18541 cctctgcgcc agggcaaatc tcggtaaatg atttacgcac agtattaact attttacatc
    18601 aggcataagc aataatattt cggcgggaat atcctccccc gccgaactaa aaaaaatata
    18661 ttcaaccgta tttaataaaa atatttcgtg agtctctgtg cgctaaatat ccatctggcg
    18721 tagggaaaat cacacctgaa tcagaaatta acaatgaaac ctgtaaaacc acctcgtatt
    18781 aatggacgag tgccggtcct gtcggcacag gaagcggtga attatattcc cgacgaagca
    18841 acactttgtg tgttaggcgc tggcggcggt attctggaag ccacgacgtt aattactgct
    18901 cttgctgata aatataaaca gactcaaacg ccacgtaatt tatcgattat tagtccaaca
    18961 gggcttggcg atcgcgccga ccgtggtatt agtccgctgg cgcaagaagg tctggtgaaa
    19021 tgggcattat gtggtcactg gggacaatcg ccgcgtattt ctgaactcgc agaacaaaat
    19081 aaaattattg cttataacta tccacaaggt gtacttacac aaaccttacg cgccgccgca
    19141 gcccaccagc ctggtattat tagtgatatt ggcatcggga catttgtcga tccacgccag
    19201 caaggcggca aactgaatga agtcacgaaa gaagacctga ttaaactggt cgagtttgat
    19261 aacaaagaat atctctatta caaagcgatt gcgccagata tcgccttcat tcgcgctacc
    19321 acctgcgaca gtgaaggcta cgccactttt gaagatgagg tgatgtatct cgacgcattg
    19381 gttattgccc aggcggtgca caataacggc ggtattgtga tgatgcaggt gcagaaaatg
    19441 gttaagaaag ccacgctgca tcctaaatct gtccgtattc cgggttatct ggtggatatt
    19501 gtggtggtcg atccggatca aagccaactg tatggcggtg cgccggttaa ccgctttatt
    19561 tctggtgact tcacccttga tgacagcacc aaacttagcc tgcccctaaa ccaacgtaaa
    19621 ttagttgcga ggcgtgcatt attcgaaatg cgtaaaggcg cggtggggaa tgtcggcgtc
    19681 ggtattgctg acggtattgg cctggtcgcc cgggaagaag gttgtgctga tgactttatt
    19741 ctgacggtag aaacaggtcc gattggcgga attacttcac aggggatcgc ctttggcgcg
    19801 aacgtgaata cccgtgccat tctggatatg acgtcccagt ttaattttta tcacggtggt
    19861 ggtctggatg tttgttattt gagttttgct gaagtcgacc agcacggtaa cgtcggcgtg
    19921 cataaattca atggcaaaat catgggtacc ggtggattta ttgatatcag tgccacctcg
    19981 aagaaaatta ttttctgcgg cacgttaacc gcgggcagtt taaaaacaga aattgccgat
    20041 ggcaaattaa atatcgtcca ggaaggacgg gtgaagaaat ttattcagga actaccggaa
    20101 attactttta gcggaaaaat cgcgctcgaa cgggaactgg atgttcgtta catcaccgaa
    20161 cgtgctgtat tcacgctgaa agaagacggc ctgcatttaa tcgaaatcgc ccctggcgtc
    20221 gatttacaaa aagatattct cgacaaaatg gatttcaccc cagtgatttc gccagaactc
    20281 aaactgatgg acgaaagatt atttatcgat gcggcgatgg gttttgtcct gcctgaagcg
    20341 gctcattaac aggagtatca cgatggattt ttctttaact gaagaacaag aactgctgct
    20401 ggccagtatt cgcgaactga ttacgactaa ctttgcggaa gagtatttcc gcacctgcga
    20461 tcaaaacggg acatatccgc gtgagtttat gcgggcgctg gcggataacg gcatttctat
    20521 gcttggcgtg ccggaagagt tcggtggcat ccctgcggat tacgtcaccc agatgctggc
    20581 gctgatggaa gtgtcaaaat gcggtgctcc ggcatttttg attaccaacg gtcaatgtat
    20641 tcacagtatg cgccgtttcg gttctgcaga gcagctacgt aaaacggcag agagcaccct
    20701 ggaaacgggt gatcccgcct atgccctggc gttgacggag ccaggcgcag gctcagacaa
    20761 caacagtgcc actaccactt acacgcgtaa aaacggcaag gtttacatca acggacagaa
    20821 aacctttatt accggtgcga aagagtaccc gtatatgctg gtgttggcgc gcgatccgca
    20881 accgaaagat cccaaaaaag ccttcaccct gtggtgggtc gactccagta agcccggcat
    20941 taagattaac ccgctgcata aaatcggctg gcatatgctc agcacctgcg aagtctatct
    21001 cgacaacgtg gaggttgaag agagcgacat ggtgggcgaa gaaggaatgg gtttcctcaa
    21061 tgtgatgtac aactttgaga tggagcgcct gatcaacgcc gcgcgcagca ccggctttgc
    21121 cgaatgcgcc tttgaagatg ccgcccgcta tgccaaccaa cgtatcgctt ttggtaagcc
    21181 cattggtcat aaccagatga tccaggaaaa actggcgctg atggcgatta agatcgacaa
    21241 catgcgcaac atggtgctga aagtggcatg gcaagccgat cagcatcagt cactgcgcac
    21301 cagcgcggcg ctggcaaaac tgtattgcgc acgtaccgca atggaagtca ttgatgatgc
    21361 gattcaaatc atgggcggtc tgggctatac cgatgaagcg cgcgtctccc gcttctggcg
    21421 tgatgtccgt tgtgaacgta tcggcggcgg tacagacgaa attatgattt acgtagcagg
    21481 tcggcagatc ctgaaagact atcagaacaa ataatctgca ggcggcgcag cttcttaaca
    21541 aactgcgccg ccagatttat ccaacaagac ttaccggttg aggaaattca gataggattt
    21601 cttgttccgc aaaacagttt ttaaattgtc tacggtaatc gctgggcgaa caaccgacat
    21661 ggcgcaaaaa cagtttggca aagtgatcga cattttcata acccacacgc caggagatct
    21721 ctgcctgtga taattcagta ttagtgagtg accattttgc ttccgtcata cgccgttgaa
    21781 taacatagtt aataggggaa atacgatact ctttggtaaa ttcatggcaa atataactga
    21841 cgctggcacg aaattttttc gataactgtt ctaaagtgat tttttcgcga taattattac
    21901 tcagatagaa aagaatatct tttatcagaa catctttttt aatatacccc tgctccgaac
    21961 gataagcatt tttaaaattt tcgtagtaaa gaatggctaa cgtataggca aatgcatccc
    22021 ataacgaaga tgtttggcta tttttacttt gcggcaaaat cacacttagc tcattaaata
    22081 aggtttttat gacttctttt ccctgccccg cggcaattac cggacaagaa tgcggttgca
    22141 gtagctgatt ttcctcagcc ccctgaaact gaaagccgta cagcgcacag gtacacgtcg
    22201 ttgccggatc gttaacgtca gaggccaccg catgcagcct gccgcgttct atcaccacaa
    22261 tgtcatccgc atgtgcgaca tataacgaag aatcgatggt aaaccttgca acccctttct
    22321 tgacgtaaat caactcggtt tcattgtcat gaacgtgatg tccggactcc cattttggat
    22381 catcgctaaa tgcaaaacgt gaaagccgtg gcgttttacc ggcgacaaac agcgtttcac
    22441 tggcgttatc aaaacagcgt tgatacatga caacctccct attccatgag caagcaaaaa
    22501 caatatatgc cggataaaat acggcgtgta ttgcggttat acaaccgcgt ttagcgagag
    22561 ctaaacaaga ttatttacac tgaatgcaag attgtacggt catggaataa ctatattgcc
    22621 gcaaattgca cttttgtttt agcgatcgca tttttttgca agattgttgg caaggaaaac
    22681 agcttgctcc gtcgaaaacc cccaccgcta tcgcacacta ttttcaggcc atttttacct
    22741 tccatcggag atggttccgt atgcgactca caggagaaat catgaaaata ataacctgct
    22801 ttaagctggt gcctgaagaa caggacattg ttgtcactcc agaatacacc ctgaatttcg
    22861 acaatgccga cgccaaaatc agccagttcg atctcaatgc cattgaagct gcaagccagc
    22921 tcgcaacaga tgacgatgag atagccgcgc tgaccgttgg cggctcattg ttgcagaact
    22981 cgaaagtgcg cagtgcgcaa agatgtgcta tcccgcgggc cgcacagcct gtatttggtg
    23041 caggatgcgc aacttgaaca tgcactgcct ctcgataccg caaaagcgct ggcggcagca
    23101 attgaaaaga tcggcttcga tttactgatc tttggtgaag gttccggcga cctttatgcc
    23161 cagcaggttg gcttgctggt cggagaaatt ctgcaacttc cggtgattaa tgcagtgagt
    23221 gctattcagc gtcagggtaa tacactggtg attgaacgca cgcttgaaga tgatgttgaa
    23281 gttattgaac tctctgttcc agccgtgctc tgcgtcacct ccgatattaa cgtgccacgc
    23341 attccttcga tgaaagccat tctcggcgcg ggtaaaaaac cggtaaatca gtggcaggca
    23401 agtgatattg actggagcca gagcgcgcca cttgctgaac tggtcggcat tcgcgtaccg
    23461 ccgcaaacag aacgtaagca catcattatc gataacgatt cgccggaggc cattgccgag
    23521 ctggcggaac atctgaagaa agccctgaac tgaagcctac ggagaagaaa cgatgagtca
    23581 attaaacagc gtctgggtct ttagcgataa tcctgaacgt tatgctgaac tgtttggcgg
    23641 cgctcagcaa tggggccaac aggtgtatgc cattgtacaa aataccgacc aggcgcaggc
    23701 agttatgcct tatggtccaa aatgtattta tgttcttgag caaaacgacg cgctgcaacg
    23761 cactgaaaat tacgccgaaa gcattgctgc cccgctgaaa gataaacacc ccgctatgtt
    23821 gctgttggcc gcgacgaaac gtggtaaagc tctggcagca cggttaagtg tgcaactgaa
    23881 tgcggcgctg gtgaacgatg ccacggcggt ggatattgtc gatggtcaca tttgcgccga
    23941 acaccggatg tatggcgggt tagcgttcgc tcaggaaaag atcaacagcc cgctggcgat
    24001 cattaccctt gcacccggtg ttcaggaacc gtgcaccagt gatacctctc atcagtgccc
    24061 gacagaaacg gtaccttatg ttgctccgcg tcatgaaatt ctctgtcgcg aacgccgtgc
    24121 gaaagccgca agcagcgtgg acctgagcaa agcaaaacgt gtggttggcg tcggtcgtgg
    24181 tctggcggcg caggatgacc tgaaaatggt ccacgaactg gcggcggtgc tgaatgctga
    24241 agtcggctgt tcacgtccaa ttgccgaagg cgagaactgg atggagcgtg aacgttatat
    24301 cggtgtctcc ggcgtgttgc tgaaatccga tctctacctg acgctgggga tctccgggca
    24361 gatccagcat atggttggcg gcaacggcgc aaaagtgatt gtcgccatca ataaagataa
    24421 aaatgcgcca atcttcaatt atgccgacta cggtctggtg ggcgatatct acaaagtcgt
    24481 ccctgccctg attagccagt tgagccgcta attccccttt caaccacatc tcccgctgta
    24541 aacgcagcgg gaagggagca taacgcatgt cggatgacaa atttgatgcc attgtggtcg
    24601 gtgcggacgt tgctagtagc gttgccgcac tggtcatggc gcgagccgga ctggatgtcc
    24661 tggtgataga acgcggcgac agtgccggat gtaaaaacat gaccggcggg cgtctttatg
    24721 cccacacact tgaagcaatc attccaggct ttgcagtatc agcgccggta gaacgcaagg
    24781 tcacacgcga gaaaatctcc ttcttaaccg aagaaagcgc cgttaccctc gattttcacc
    24841 gcgagcaacc agatgttccg caacacgcat cttataccgt attgcgtaat cgtctggacc
    24901 cgtggttgat ggaacaagcc gagcaggcgg gcgcacagtt tatcccgggc gttcgcgtcg
    24961 atgcgttggt tcgtgaagga aacaaggtca ctggcgtgca ggccggggat gatattctcc
    25021 aagcgaatgt ggtggttcta gctgatggcg taaactcgat gcttggccgc tcgctgggaa
    25081 tggttcccgc ttccgatccg catcattacg ctgttggtgt taaagaggtt attggcctca
    25141 caccagaaca gatcaacgat cgctttaata ttacgggcga ggaaggtgcc gcctggctgt
    25201 ttgccggctc cccttctgac ggcctgatgg gcgggggatt tctctatacc aacaaggatt
    25261 ccatatcctt ggggctggtt tgtggattgg gtgatatcgc ccatgcgcaa aaaagcgtgc
    25321 cgcaaatgct ggaagatttt aaacaacacc ccgccattcg cccactaatt agcggcggca
    25381 aactgcttga atattccgcg catatggtgc cagaaggcgg tctggcaatg gtgccgcaga
    25441 tggttaacga tggcgtgatg atcgttggtg acgccgcagg cttctgcctg aatttgggtt
    25501 ttacagttcg tggcatggat ttagccattg catcggctca ggctgccgcc acaacggtga
    25561 tcgccgccaa agaacgcgag gatttctccg ccagcagtct ggcgcaatac aaacgtgagc
    25621 tggaacaaag ctgcgtcatg cgcgatatgc agcatttccg caagatcccg gcgctgatgg
    25681 aaaacccgcg cctgtttagc caatactcac gaatggtcgc cgacatcatg aacgagatgt
    25741 tcaccattga cggcaaacca aaccagccgg tacgcaaaat gatcatggga cacgcgaaga
    25801 aaattgggct gatcaacttg ctgaaagatg gcattaaggg agcaaccgcg ctatgagcca
    25861 gaacgctacg gttaacgtcg acatcaaatt aggcgtcaat aaattccatg ttgatgaggg
    25921 ccacccgcat atcattctgg cggcaaatcc cgatatcaat gaattccgta aattaatgaa
    25981 agcttgccct gccggacttt ataagcagga tgacgccggc aacattcatt tcgattccgc
    26041 cggttgtctg gagtgcggca cctgtcgggt gctgtgcggc aacactattc tcgaacagtg
    26101 gcaatatccc gcaggcacct tcggtattga ttttcgctac ggctaatcat gcatcccaca
    26161 ggcccgcatc tcgggcctga tgttctgttt cgagagtcca aaatgaaagt gacattaacg
    26221 ttcaacgaac aacgtcgtgc ggcgtatcgt cagcaagggt tatggggcga tgcttcactg
    26281 gccgattact ggcagcagac cgctcgtgcg atgccagaca aaattgccgt ggtcgacaat
    26341 catggtgcaa cgtacaccta tagcgcgctc gatcacgccg cgagctgtct ggcaaactgg
    26401 atgttagcga agggtattga atcaggcgat cgcatcgcat ttcaactgcc tggctggtgt
    26461 gaatttaccg ttatctatct tgcctgcctg aaaatcggtg cggtttccgt gccgctgttg
    26521 ccttcctggc gggaagcaga actggtgtcg gtgctcaata agtgtcaggc aaaaatgttc
    26581 tttgcaccga cgttgtttaa acaaacacgt ccggtagatt taatcctgcc gctgcaaaat
    26641 cagcttccac aactacaaca aattgtcggc gtggacaaac tggctcccgc cacctcttcc
    26701 ctctcattaa gtccgattat cgccgacaat acctcactga ccacggcgat aacgacccac
    26761 ggcgatgaat tagctgcggt gctgtttacc tccggaaccg agggtctgcc aaagggcgtg
    26821 atgctaacgc ataacaatat tctcgccagt gagcgggctt attgcgcgcg actgaatctg
    26881 acctggcagg atgtctttat gatgcctgcg ccacttggtc acgcaacggg ctttctgcat
    26941 ggcgtaacgg caccattctt aattggcgct cgcagcgtgt tgttagatat tttcactcct
    27001 gatgcgtgtc tcgcgctgct tgagcagcag cgttgcacct gtatgctagg cgcaacgccg
    27061 tttgtctatg atcttttgaa tgtactagag aaacaacccg cggacctttc agcgctgcgt
    27121 ttctttcttt gcggcggtac cacaatcccc aaaaaagtgg cacgtgaatg ccagcagcgc
    27181 ggcattaaat tattaagtgt ttatggttcc acagaaagtt cgccgcatgc ggtggtgaat
    27241 ctcgatgatc ctttgtcgcg ctttatgcac accgatggtt acgctgccgc aggtgtagag
    27301 attaaagtgg tcgatgacgc acgcaagacc ttaccgccag gttgcgaagg tgaagaagcc
    27361 tcgcgtggcc ccaatgtgtt tatggggtat tttgatgaac ctgaattaac cgcccgtgcg
    27421 ctggacgaag aaggctggta ttgcagcggc gatctctgcc gtatggatga ggctggctat
    27481 ataaaaatta ccggacgcaa aaaagatatt attgtccgcg gcggcgaaaa tattagcagc
    27541 cgtgaagtgg aagatatttt attgcagcat cctaaaattc acgatgcctg tgtggttgca
    27601 atgcccgatg aacgtttagg tgaacgatca tgcgcttatg tcgtgctgaa agcgccgcat
    27661 cattcattat cgctg
//
LOCUS       DAJVUK010000039        27610 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.039, whole genome shotgun sequence.
ACCESSION   DAJVUK010000039 DAJVUK010000000
VERSION     DAJVUK010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27610
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.039"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(175..705)
                     /gene="ppa"
                     /locus_tag="OQQ57_001574"
     CDS             complement(175..705)
                     /gene="ppa"
                     /locus_tag="OQQ57_001574"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HCS1956378.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            1015..1971
                     /gene="ytfQ"
                     /locus_tag="OQQ57_001575"
     CDS             1015..1971
                     /gene="ytfQ"
                     /locus_tag="OQQ57_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HCS1956379.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY"
     gene            2111..3613
                     /locus_tag="OQQ57_001576"
                     /pseudo
     CDS             2111..3613
                     /locus_tag="OQQ57_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026286.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
     gene            3627..4649
                     /locus_tag="OQQ57_001577"
     CDS             3627..4649
                     /locus_tag="OQQ57_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1956380.1"
                     /translation="MPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     EVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
                     FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSRDKT"
     gene            4636..5631
                     /gene="yjfF"
                     /locus_tag="OQQ57_001578"
     CDS             4636..5631
                     /gene="yjfF"
                     /locus_tag="OQQ57_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HCS1956381.1"
                     /translation="MIKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGG
                     RLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLST
                     GLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQG
                     LIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(5664..6662)
                     /gene="fbp"
                     /locus_tag="OQQ57_001579"
     CDS             complement(5664..6662)
                     /gene="fbp"
                     /locus_tag="OQQ57_001579"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HCS1956382.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            6838..8211
                     /gene="mpl"
                     /locus_tag="OQQ57_001580"
     CDS             6838..8211
                     /gene="mpl"
                     /locus_tag="OQQ57_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HCS1956383.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADTANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            complement(8294..8845)
                     /locus_tag="OQQ57_001581"
     CDS             complement(8294..8845)
                     /locus_tag="OQQ57_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HCS1956384.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEE"
     gene            8939..10291
                     /gene="pmbA"
                     /locus_tag="OQQ57_001582"
     CDS             8939..10291
                     /gene="pmbA"
                     /locus_tag="OQQ57_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HCS1956385.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGVDCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            10475..10861
                     /gene="cybC"
                     /locus_tag="OQQ57_001583"
     CDS             10475..10861
                     /gene="cybC"
                     /locus_tag="OQQ57_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HCS1956386.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDTLKVVEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNAYHQKYR"
     gene            complement(10906..11370)
                     /gene="nrdG"
                     /locus_tag="OQQ57_001584"
     CDS             complement(10906..11370)
                     /gene="nrdG"
                     /locus_tag="OQQ57_001584"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HCS1956387.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSG
                     QPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(11560..13698)
                     /gene="nrdD"
                     /locus_tag="OQQ57_001585"
     CDS             complement(11560..13698)
                     /gene="nrdD"
                     /locus_tag="OQQ57_001585"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HCS1956388.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYSNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            complement(14092..15747)
                     /gene="treC"
                     /locus_tag="OQQ57_001586"
     CDS             complement(14092..15747)
                     /gene="treC"
                     /locus_tag="OQQ57_001586"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HCS1956389.1"
                     /translation="MTNPPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHK
                     LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYY
                     LHLFAPEQADLNWENPAVRAVLKKVCEFWADRGVDGLRLDVVNLISKDPRFPDDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALA
                     DDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK"
     gene            complement(15797..17218)
                     /gene="treB"
                     /locus_tag="OQQ57_001587"
     CDS             complement(15797..17218)
                     /gene="treB"
                     /locus_tag="OQQ57_001587"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HCS1956390.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNARQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAETFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPNYWQVFALAMAIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            complement(17319..18284)
                     /gene="treR"
                     /locus_tag="OQQ57_001588"
     CDS             complement(17319..18284)
                     /gene="treR"
                     /locus_tag="OQQ57_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001181347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HCS1956391.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQF
                     SPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLSRSFPER"
     gene            18469..18522
                     /gene="mgtL"
                     /locus_tag="OQQ57_001589"
     CDS             18469..18522
                     /gene="mgtL"
                     /locus_tag="OQQ57_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HCS1956392.1"
                     /translation="MEPDPTPLPRRRLKLFR"
     gene            18663..21359
                     /gene="mgtA"
                     /locus_tag="OQQ57_001590"
     CDS             18663..21359
                     /gene="mgtA"
                     /locus_tag="OQQ57_001590"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HCS1956393.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQLSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQ
                     GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(21565..21951)
                     /gene="ridA"
                     /locus_tag="OQQ57_001591"
     CDS             complement(21565..21951)
                     /gene="ridA"
                     /locus_tag="OQQ57_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HCS1956394.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAIRR"
     gene            complement(22024..22485)
                     /gene="pyrI"
                     /locus_tag="OQQ57_001592"
     CDS             complement(22024..22485)
                     /gene="pyrI"
                     /locus_tag="OQQ57_001592"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HCS1956395.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            complement(22498..23433)
                     /gene="pyrB"
                     /locus_tag="OQQ57_001593"
     CDS             complement(22498..23433)
                     /gene="pyrB"
                     /locus_tag="OQQ57_001593"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HCS1956396.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQSELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL"
     gene            complement(23437..23571)
                     /gene="pyrL"
                     /locus_tag="OQQ57_001594"
     CDS             complement(23437..23571)
                     /gene="pyrL"
                     /locus_tag="OQQ57_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HCS1956397.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            complement(23851..24246)
                     /locus_tag="OQQ57_001595"
     CDS             complement(23851..24246)
                     /locus_tag="OQQ57_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCS1956398.1"
                     /translation="MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPEKQFEDIMTVKNEIFSAP
                     SYPTWTAVGVTWLAGFDFEIKVIARIPEL"
     gene            complement(24377..25090)
                     /gene="bdcA"
                     /locus_tag="OQQ57_001596"
     CDS             complement(24377..25090)
                     /gene="bdcA"
                     /locus_tag="OQQ57_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1956399.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     ERLAQETGATAVFTDSADKDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRL
                     FKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMSHSFMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            25161..25754
                     /locus_tag="OQQ57_001597"
     CDS             25161..25754
                     /locus_tag="OQQ57_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCS1956400.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGNKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLAEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSYDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE"
     gene            25899..26351
                     /gene="tabA"
                     /locus_tag="OQQ57_001598"
     CDS             25899..26351
                     /gene="tabA"
                     /locus_tag="OQQ57_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin biofilm protein TabA"
                     /protein_id="HCS1956401.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA"
     gene            26474..27610
                     /locus_tag="OQQ57_001599"
                     /pseudo
     CDS             26474..27610
                     /locus_tag="OQQ57_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016234052.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
BASE COUNT         6618 a         6839 c         7304 g         6849 t
ORIGIN      
        1 ttccagcaag tggctatgaa cagcaaaatg gtggtcgggt ttgcttgttc ttaccgttca
       61 agccttgcaa ccgctgagaa taatgatggt ggaatagaga gtttatttat cgcgggcata
      121 aaaaaaccct tactaaccga agcccggcgt tcagggttat tgcgctagaa gaacttattt
      181 attctttgcg cgctcgaagg aagcaacgat ttcagcttta gcggcttctg cgttttccca
      241 accttcaact ttcacccact tgcctttttc gaggtctttg tagtgctcga agaagtgagc
      301 gatttgcgct ttcagcagtt caggcagatc gtttacgtct ttaatgtgat cgtattcttt
      361 gctcagcttg ctgtgcggaa ccgcaaccag tttcgcatct tcaccggctt cgtcggtcat
      421 tttcagaacg ccaaccggac ggcaacggat cacagaacca ggctgcagcg ggtacggagt
      481 cgggaccagt acgtcaaccg ggtcaccgtc cagagacagg gtgtggttga tgtaaccgta
      541 gttgcacgga tagaacatcg cggtggacat gaagcggtca acgaacagtg cgccgctctc
      601 tttgtcgatt tcgtatttga tcggatctgc gttagccggg atctcaataa caacgtagat
      661 gtcttccggc agatctttac ccgcagggac gttgagtaag ctcatgtctg tttcctttaa
      721 aaatatgtgg caaacaagtg ccgagtatta tagccaactc gcgccgaatg tctttgcttg
      781 ttttcgtctt cattttcctt tttcgccagt tttaagacgg tatacagagc aggaaaatcc
      841 ataaccgtag ccgcattttt catagtgaga tgaaagcgat tacaaacttg tgattaacgt
      901 tttatttact tttttgaagt gtgatgtaac gcaatccgtt acataacgaa ttgtctatag
      961 ttttttcgcg aacatctttt caccaataat aattaccccg acgaggacaa ccctatgtgg
     1021 aaacgcttac ttgtagtctc tgcagtctcg gcagccatgt cgtctatggc gttggccgct
     1081 ccattaaccg taggattttc gcaggtcgga tcggaatccg gctggcgcgc cgcagaaacc
     1141 aatgtggcga aaagtgaggc cgaaaaacgc ggaattacgt tgaaaattgc cgatggtcag
     1201 caaaagcagg aaaaccggat taaagcggta cgttccttcg ttgcacaagg ggtggatgcg
     1261 atctttatcg ctccagtggt tgcgacgggt tgggaaccgg tattaaaaga ggcgaaagat
     1321 gccgaaatcc cggtcttctt gctcgaccgt tccatcgatg tgaaagacaa atctctctat
     1381 atgaccaccg ttactgccga caacatcctc gaaggtaagt tgatcggtga ctggctggta
     1441 aaagaagtga atggcaaacc atgcaacgtg gtggagctgc agggcaccgt tggggccagc
     1501 gtcgccattg accgtaagaa aggctttgcc gaagccatta agaatgcgcc aaatatcaaa
     1561 attatccgct cgcagtcagg tgacttcacc cgcagtaaag gcaaagaagt catggagagc
     1621 tttatcaaag cggaaaacaa cggcaaaaac atctgcatgg tttacgccca taacgacgac
     1681 atggtgattg gtgcaattca ggcaattaaa gaagcgggcc tgaaaccggg caaagatatt
     1741 ctgacaggtt ctatcgatgg cgtaccggat atctacaaag cgatgattga tggcgaagcg
     1801 aacgccagtg ttgaactgac gccgaatatg gcgggacccg cttttgacgc gctggagaaa
     1861 tacaaaaaag acggcaccat gcctgaaaag ctgacgttaa ccaaatccac cctttacctg
     1921 cctgataccg caaaagaaga gttagagaag aagaaaaata tggggtattg agggttgcta
     1981 tgcctgatgc cgattcgtag gccggataag gcgctcgcgc cgcatccggc gatggtgcac
     2041 tgaagcctga tgcgacgctt accgcgtctt atcatgccta ctgggagcac gctttacacc
     2101 gggggaaacc atgacgaccg accaacacca ggaaatcctc cgcaccgaag gattaagtaa
     2161 atttttcccc ggcgtcaaag cgttagacaa cgttgatttc agcctgcgcc gtggcgaaat
     2221 catggcgctg ctcggtgaaa acggggcggg aaaatcaacg ctaatcaaag cattaactgg
     2281 tgtataccac gccgatcgcg gcaccatctg gctggaaggc caggttatct caccgaaaaa
     2341 taccgcccac gcgcaacaac tcggcattgg caccgtctat caggaagtca acctgctacc
     2401 caatatgtcg gtcgctgata atctatttat aggccgcgaa cccaaacgct tcggccttct
     2461 acgccgcaaa gagatggaaa agcgcgccac cgaactgatg gcatcttacg gtttctccct
     2521 cgacgtgcgc gaaccgctca accgcttttc agtcgcgatg cagcaaatcg tcgccatttg
     2581 ccgggctatc gatctctccg ccaaagtgct gatcctcgat gaacccaccg ccagcctcga
     2641 cacctaggaa gtggagctat tatttggcct gatgcgtcag ttgcgcgatc gcggcgtcag
     2701 cctgatcttt gtcactcact ttctcgatca gagctatcag gtcagcgatc ggatcaccgt
     2761 tttacgcaac ggcagtttcg taggctgtcg ggaaacgcgc gagctaccgc agatcgaact
     2821 ggtaaaaatg atgctggggc gcgagctgga tacccacgcg ctacagcgtg ccgggcgaac
     2881 attgttgagc gacaaacccg ttgccgcgtt caaaaattac ggcaaaaaag gaacgatagc
     2941 accgtttgat ctcgaagtgc gccccggcga gatcgtcggc ctggcaggct tgctgggatc
     3001 cggacgtacc gaaaccgccg aagtgatctt cggtatcaaa cctgctgaca gcggcacggc
     3061 gttgatcaaa ggcaaaccgc aaaacctgcg atcgccacat caggcttcgg tactgggcat
     3121 cggcttctgc ccggaagaca ggaaaaccga tggcatcatc gctgccgcct cggtgcggga
     3181 aaatatcatc ctcgctctcc aggcccagcg cggctggcta cgacctattt cccgcaaaga
     3241 gcagcaagag attgccgaac gctttatccg ccagcttggc attcgcacac cttcaactga
     3301 acaaccgatt gaatttctct ccggcggcaa tcagcaaaaa gtgttgcttt cacgttggct
     3361 actgacccga ccgcaatttc tgatcctcga tgagccaacc cgtggcattg atgttggtgc
     3421 ccacgccgag atcatccgcc tgattgaaac gctatgcgcc gatggtctgg cgctgctggt
     3481 gatctcctcc gaactggaag aactggtggg ctatgccgac cgggtgatca tcatgcgcga
     3541 tcgcaaacag gtggcggaga tccggctggc agagctttcc gttccggcta tcatgaacgc
     3601 cattgcggcg taaggagaac agtgtgatgc ctcaatctct tccggacacc actacgccaa
     3661 aaaggcgctt tcgctggccg acggggatgc cgcagctggt agcactattg ctggtgctgc
     3721 tggtcgacag cctggtagcc ccgcatttct ggcaggtagt gcttcaggat gggcgtttgt
     3781 tcggtagccc catagacatt cttaaccgtg cagcccccgt tgcgttactg gcgattggta
     3841 tgacgctggt gatcgccacc ggtgggattg atctctccgt aggggcggtg atggctatcg
     3901 ccggagccac aacggctgcg atgacggtcg cggaagtcag cctgccgatt gttttgttaa
     3961 gcgccctagg caccggcatc ctggcgggat tgtggaacgg catactggta gcgatcctca
     4021 aaattcagcc atttgtcgcc accctgatcc tgatggtcgc cgggcgcggc gtggcgcaac
     4081 tgatcacctc cggacagatc gtcacgttta actcgccgga tctctcatgg tttggcagtg
     4141 gatcgctgtt gttcctgcca acgccagtca ttattgcggt actgacgctt ctcctgttct
     4201 ggctgttgac ccgcaaaacg gcactgggga tgtttatcga agccgttggt atcaacattc
     4261 gggcggcaaa aaatgccggg gtaaacacgc ggatcatcgt catgctcact tatgtgttga
     4321 gcgggctgtg tgcggcgatt gcgggcatta tcgtggcggc ggatattcgc ggtgccgatg
     4381 ccaacaacgc cggattatgg ctggagctgg acgccattct cgcggtggtg attggcggcg
     4441 gatcgctgat gggcgggcgc tttaacctgc tgctctcggt agtgggggcg ctgattattc
     4501 aggggatgaa caccggaatt ttgctttcgg gctttccacc ggagatgaac caggtggtga
     4561 aagcggtggt ggtgctttgc gtgctgattg tccagtcgca acgctttatc agtctgatta
     4621 aaggagtacg tagccgtgat aaaacgtaat ttgccactga tgatcaccat cggcgtcttt
     4681 gtgctgggct atttctactg cctgacgcag tttcccggtt ttgcttccac aagagtgatc
     4741 tgcaatatcc tgaccgataa cgcttttctg gggattattg ccgttggtat gacctttgtg
     4801 atcctctctg gcggtatcga tctctccgtc ggttcggtga tcgcctttac tggcgtgttt
     4861 ctggcaaaag tggttggcga tttcggcctc tcgccgctgc tggcgtttcc gctagtgctg
     4921 gtgatgggct gtgccttcgg cgcatttatg gggcttctga tcgacgccct gaagatcccg
     4981 gcatttatca ttacgcttgc ggggatgttc tttttgcgcg gcgtcagcta tctcgtttcg
     5041 gaagagtcga ttccgataaa ccatcccatt tatgacacgc tctcaagcct tgcgtggaaa
     5101 atccccggcg gcggtcgcct tagtgcgatg gggctgttga tgctggcggt ggtggttatc
     5161 ggtattttcc ttgcgcatcg tacccgtttt ggcaatcagg tgtacgctat tggcggcaac
     5221 gcgacgtcgg cgaacctgat ggggatttct actcgcagca ctactattcg catttatatg
     5281 ctctccaccg gactggcaac actggcgggg attgtcttct cgatttatac ccaggccgga
     5341 tatgcactgg cgggcgtagg tgtggaactg gacgccatcg cgtcggtggt gattggcggt
     5401 acgttgttaa gtggtggcgt cgggacggtg cttgggacgc tttttggcgt ggcaattcag
     5461 ggactgatcc agacttacat caactttgac ggcacgctga gttcctggtg gacgaaaatc
     5521 gccatcggta ttttgttgtt tatttttata gcattacagc gtgggttaac ggtgctgtgg
     5581 gagaatcgtc agagttcgcc agtgacaaga gtcaacattg cgcagcgata aaaatgcctc
     5641 tccgtgtgga gaggcgcagg agattacgcg tccgggaact cacggataaa gcgttcgaca
     5701 tcttcaacca tatggtcgtt gccgacaaag aacgaacggc gctggtgcag agtttccggg
     5761 atgatatcca gaatacgctc tttgccatcg ctcgctttac cgcccgcttg ttccgccagg
     5821 aatgccatcg ggttgcactc ataaagcaaa cgcagtttgc cgtccgggtg gctggcggtg
     5881 cttgggtaga gataaatacc gcctttcagc aggttacggt ggaaatccgc aaccagtgaa
     5941 ccgatataac gtgaggtata cgggcggttg gtggatttat cttcttcctg gcagaattta
     6001 atgtacttct tcaccccgtt cggaaactta atgtagtttc cttcgttgat ggagtaggtt
     6061 ttgcctttct ccgggaagcg catccgttcc tggcacaggc agaaaacgcc cagcgaagga
     6121 tcgtaagtaa aggcgtgaac accgcatccg gtggtgtaaa ccagcatggt agaggagccg
     6181 tataccacgt aacctgccgc aacctgtttg ttaccaggct ggaggaaatc ttcttccgtt
     6241 accggcgtgc cgacgggcgt aactcggcgg tagatggaga aaatggtacc gacagagacg
     6301 ttaacatcga tgttggacga gccatccagt gggtccatca gcaccacgta ttttgcatgt
     6361 tcacagcctt caaagacaac aatctcatct tcttcttcag aggcaatgcc tgcaacgata
     6421 tcgcgtgctt tcagtgcggc tttcagtttt tcattagcga acaagtcgag tttttgctga
     6481 acctcgccct gcacgttctc agcaccgctg gcacccagga tatcaaccag tcctgctttg
     6541 ttgatatcgc gatggataat cttggcgccc agttttattg ccgacagcaa agcagtgagc
     6601 tcaccggtag catgagaaaa ctcgtgctgc ttttcgacaa taaattcacc taacgttttc
     6661 ataaaacttt ccctgcaatg tttatggagt aaagcgaccg caacaatctt aacaaataat
     6721 ctcaatgttg cgctcaggtg aatcgcgcca gcaaattacg gattatcctg aaatgcgttt
     6781 ctcacttgcc cgacatatgc gtaaaatgag cggcagatta aaaaaggata gtgacgtatg
     6841 cgcattcata ttttaggaat ttgtggcacg tttatgggcg gtctggcgat gctggcgcgc
     6901 cagttaggcc atgaagtaac gggttcggac gccaatgtgt atccgccgat gagcacctta
     6961 cttgagaagc aaggcattga actgattcag ggttacgatg ccagccagct cgatccgcag
     7021 ccggatctgg tgattattgg caacgccatg acccgtggaa atccgtgtgt ggaagcggta
     7081 ctggaaaaaa acatccctta tatgtcaggt ccacagtggc tgcacgattt tgtgctgcgc
     7141 gaccgctggg tgctggccgt tgccggtaca cacggcaaaa ccaccaccgc gggaatggcg
     7201 acctggattc tggaacagtg tggttacaaa ccgggatttg tgatcggcgg tgtgccgggg
     7261 aactttgagg tttcggcgcg tctgggcgaa agcgacttct ttgttatcga agcggatgag
     7321 tacgactgcg ccttcttcga caaacgctct aaatttgtcc attactgccc gcgtacgctg
     7381 atcctcaaca accttgagtt cgatcacgcc gatatctttg acgacctgaa agcgatccag
     7441 aaacagttcc accatctggt gcgtatcgtt ccggggcagg gccgtattat ctggccggaa
     7501 aatgacatca acctgaaaca gaccatggcg atgggctgct ggagcgagca ggagctggtg
     7561 ggtgagcagg ggcactggca ggcgaaaaag ctgaccactg atgcttccga atgggaagtc
     7621 ttgctggatg gcgaaaaagt gggcgaagtg aaatggtcgc tggtaggcga acataatatg
     7681 cataatggcc tgatggcgat tgcggcggcc cgccatgttg gcgtagcgcc ggcagatacc
     7741 gctaacgcgc tgggttcgtt tattaatgct cgtcgccgtc tggagttgcg tggtgaagcg
     7801 aatggcgtca cggtatatga cgattttgcc catcacccga cggcgattct ggcaacgctg
     7861 gcggcgctgc gtggcaaagt tggtggtaca gcgcgcatta ttgctgtgct ggaaccgcgc
     7921 tcgaatacca tgaaaatggg gatctgcaaa gacgatttgg caccttcatt aggtcgtgcc
     7981 gatgaagtct tcctgctgca accggcgcat attccgtggc aggtggcaga agtggcagaa
     8041 gcctgcgttc agcctgcaca ctggagtggc gatgtggata cgctggcaga tatggtggtg
     8101 aaaaccgctc agcctggcga ccatattctg gtgatgagca acggcggttt tggtgggatc
     8161 catcagaaac tgctggatgg tctggcgaag aaggcggaag ctgcgcagta attcggcctc
     8221 agcctgagat agcattgccg gataaggcgt ttacgccgca tccggcaaac catactcaca
     8281 tcaacaacga aaattactct tcattctccg ccagttcgcg cagatactgg aaaatctggc
     8341 gtgcggattt cggcggctta ttcccttctt tctctttctt cgcgttgcgg atcagagtac
     8401 gcagttgctg acgatcggca tcgggccaca gatttaatac ctcagcgatg gcgtcatcac
     8461 cttgatcgat cagacgatcg cgcaggtttt ccagtttatg gaacagcacc acctgctggt
     8521 tgtgacggtt tttcagctta tccagcgcct gacggatcgg ttctacatcg cgctggcgca
     8581 gcatcttacc gatgagctgc aactggcggc ggcgaccttc catcttaata cgctgggcga
     8641 gctcaatagc cgcgcgcaga tccgcatcta acgggatctt atccagcgcg tttttcccca
     8701 gatcaacaat ttccgcgcca aggcgtttta gctcctcggc atcacgttta atttcacttt
     8761 tactgaccca gataatttca tcgtcttcgt cttcgatgtc atcaccggga acgtcgtcga
     8821 gccagtcttc gggctgctta gtcatctcag gctccttaaa aaaagaggct aatgttacca
     8881 gttaagatgc gcactgaaaa acggttctct gttagacttc agagaaactc tctacattat
     8941 ggcacttgca atgaaagtaa tctctcaagt tgaagcgcag cgcaagattc tggaagaagc
     9001 agtttccact gcgctggagt tggcctcagg caaatcggac ggtgcggaag ttgccgtcag
     9061 caagaccacc ggcattagcg taagcacgcg ttatggtgaa gtggagaatg ttgaattcaa
     9121 tagcgatggc gcgctgggga tcactgttta tcaccagaac cgcaaaggta gcgcatcatc
     9181 caccgattta agcccgcagg ccattgcccg tactgtacag gcggcgctgg atattgcccg
     9241 ttatacctcg ccagatccct gtgccggcgt ggcagacaaa gagctgctgg cctttgacgc
     9301 accagatctc gacttgttcc accctgcgga agtttccccg gatgaagcca ttgaactggc
     9361 ggcccgcgca gaacaggcgg cattgcaggc ggacaaacgc atcaccaata ccgaaggtgg
     9421 cagctttaac agccactacg gtgtcaaagt ttttggcaac agccacggca tgttgcaggg
     9481 ttactgctca acgcgtcatt cgctctccag ctgtgtaatt gccgaagaaa atggcgatat
     9541 ggagcgtgat tacgcctaca ccattggtcg tgcgatgagc gatctgcaaa cgccagagtg
     9601 ggttggggtc gactgtgctc gccgtacttt atcgcgcctg tcaccgcgta aactctccac
     9661 catgaaagcg ccggtcattt ttgccaatga agtggcaacc gggctttttg gccatctggt
     9721 gggggcgata gcgggtggat cggtttaccg taaatctacc ttcctgctgg attcgctggg
     9781 taaacaaatt ctgccggact ggctgaccat tgaagagcat ccgcatctgc tgaaagggct
     9841 ggcgtcgacg ccattcgaca gcgaaggtgt gcgcaccgag cgtcgcgata ttattaaaga
     9901 tggcatcctg actcagtggc tgctgaccag ctattcggcg cgaaaactgg ggctgaaaag
     9961 caccggacat gcgggcggta ttcacaactg gcggattgcc ggacaaggtc taagcttcga
    10021 gcagatgctc aaagagatgg gcaccgggct ggtggtgacg gaattgatgg gccagggcgt
    10081 gagtgcaatt accggtgatt attcccgtgg tgcggcgggc ttctgggtag aaaacggcga
    10141 aattcagtat ccggttagcg aaatcaccat cgcaggtaat ttaaaagata tgtggcgcaa
    10201 tattgtcacc gtcggtaacg atattgaaac acgcagtaat atacagtgtg gttctgtgct
    10261 gttgccggag atgaaaatcg ccggacagta aaaaaactgg cgcgacctgt cgcgctataa
    10321 actaaaaaat tacacaaaat cattcgcact gcatcgagac ggaaagtgaa tgagggccgg
    10381 ggagcgtact cgcagtacgt gacccggtcg aatgagcgta gtcgtcgatg aggcagtgtg
    10441 aatgatgaag tgtaaataaa aaaggaagtg agcaatgcga aaaagcctgt tagctattct
    10501 tgcagtctcc tcgttggtat tcagttcggc gtcgtttgcc gctgatcttg aagacaatat
    10561 ggaaaccctc aacgacactt taaaagtggt cgaaaaagcc gataacgcgg cgcaagtcaa
    10621 agacgcgtta acgaagatgc gcgccgcagc gctggatgcg caaaaagcaa cgccgccgaa
    10681 gctcgaaggc aaatcaccgg acagcccgga gatgaaagac ttccgtcacg gtttcgatat
    10741 tctggtcggt cagattgacg acgcgctgaa gctggcaaat gaaggtaaag taaaagaagc
    10801 gcaggctgcc gcagagcaac tgaaaacgac ccgcaacgcc tatcaccaga agtatcgtta
    10861 attcctcatt tccctgttgc ctgcactcag gtaacaggga acttatcatc gcaaatgatg
    10921 caccacctga ttgctgctgc cgcgccagat cagggaaggg tcttttaaat cctgcacaaa
    10981 tttgccgtcg accagcacgt taatcaaatc aacaacctgc atttgcgctg cgttgagttc
    11041 gtcgagttta tagcctgtcc acacccagat gtctttaccc ggacactcgg cgcggatgcg
    11101 ttgtaccagt ttcagaatat ccggcacgtt ttgcggatgc agcggatcgc cgccggagag
    11161 ggaaataccc tggcgtttga tacgagtgtc attcagatcg ttaatgatct ggtcttccat
    11221 tgctttagta aatggctgac cggaatttac ccgccatgtg cttttgttat agcaaccggg
    11281 gcattcatga acacacccgg agacaaacag agtgcaacga gtgccggggc cgttgacgat
    11341 gtcgacagga tagtactgat gataattcat tatttcgcct ggcttatcag tccgcgtgta
    11401 gactgcatcc ggtaatcaat gcctgatgcg acgctgtcgc gtcttatcag gcctacagcc
    11461 gttgccaaat gtaggccgga taaggcgttt acgccgcatc cggcaatcaa cgcgggatgc
    11521 gacgctttca catcacatcc ggcatttgct tagtgcagat caacctatct gcccatttcc
    11581 caaatgttta acgcggcgct taacttcttc ctgcttgccg gcgttaaacg gacgtgcatc
    11641 cgggctacct aaatatccgc acacgcggcg agttaccgac acacgggagg cgtcatggtt
    11701 accacatttc gggcaggtga agcctttgct ggtgcactcg aactcaccgg taaagccaca
    11761 ctcgtagcac tcatcaatcg gtgtattggt gccgtaatac ggtacatgct gatagctgta
    11821 atcccagaca tcttccagcg ccttcaggtt gtgctgaatg tttgaatact cgccgtagca
    11881 aatgaaacca ccgttcgcca gcggcgggta aggcgcttca aagtcgatct tgtcgtacgg
    11941 gttcaccttc ttctccacat cgaggtggaa actgttggtg tagtaacctt tatcggtcac
    12001 gcccggcacc acgccaaact cagcagtatc gagacggcag aagcggtcgc acaggttttc
    12061 actcggcgtg ctgtagagac tgaaaccata acccgtttct tccttccact gatccactgc
    12121 ctgacgcaga cgttcaacaa tggcgatacc tttcgcgcga agctgctcgt tgtcgtaaac
    12181 atgctcgccg ccgaacagcg cgttaatggt ttcgtggatg ccgatgtaac ccagcgaaat
    12241 agacgcacga ccgtttttga agatttcaga aacatcatcg tcagcattga gacgcacgcc
    12301 acaagcacct tccatataga ggatcggggc cacgcgcgct ttcacgcctt cgagacgagc
    12361 gatacgggtc atcagcgcct tacgtgccag caccagacgt tcatccagca gcttccagaa
    12421 ggtggcttca tcgccttttg cttccagagc aatacgcggc aggttcaggc tgatcacgcc
    12481 gaggttgtta cgaccatcgt ggatctgctc gccgttttca ttttcccaca cgccgaggaa
    12541 gctgcggcag cccatcggag ttttaaacga accggtgact ttcactacct gatcgtagtt
    12601 caggatatcc ggatacatgc gcttgcttgc gcactccagc gccagctgtt tgatgtcgta
    12661 gttcggatcg ccttttttat ggttcaggcc atcgcgaatc gcaaacacca gtttcgggaa
    12721 caccgcagtt ttacggtttt taccgaggcc tgcgatacgg ttacgcagga tagattcctg
    12781 aatcaggcgc gactcccagc tggtgcccag accaaaacca aaggttacaa acggcgtctg
    12841 accgttggcg gtgtgcaggg tgtttacttc gtactccagc gactggaagg catcgtagca
    12901 ctctttaatg gtacgagagt tagcgtagcc ttcggcgtcc gggatgttcc actcttctgc
    12961 ggtcttgcga tgtttgttgt agctggcggt gacaaacggt gccagcactt catcgatacg
    13021 gttaatggtg gtgccgccat aaatatggct ggcgacctga gcaataatct gcgcagttac
    13081 agcggttgcc gtagagatcg acttcggcgg ttcaatctcg gcgttcccca tcttaaagcc
    13141 ctgggtcagc atgcctttca ggtcgatcaa catgcagttg aacatcggga agaacggcga
    13201 gtaatcgaga tcgtgatagt gaatatcgcc acgctcatgt gcctgcacca cgtcacgcgg
    13261 cagcaggtgc tgacgtgcat agtgtttagc cacgatcccg gccagcaggt cgcgctgggt
    13321 tggaatcacc ttgctgtctt tgttggcgtt ttcgttgagt aacgaggcgt tggtctgctc
    13381 gaccagacca cggatctcct gattcaggcg accgcgtttt tcacgttcaa tgtcgcgatc
    13441 gtgacggtac tcgatgtaag cacgagccag ttgtttgtat ggacctgaca tcagctggtt
    13501 ttcaacagcg gtctggatct cattgatatc cacctggttg cggccctgca tctgctcgct
    13561 gacaactgca gcaacagtgg cgcaataatc ggcatcatcg acttccgctg ctttagctgc
    13621 acgcagaatc gcttctttga tgcgctctga tttaaacggc actttgcagc cgtctcgttt
    13681 catcacatgc ggtgtcatga tcgctccata tttttaagaa caggttatcc acagaaattg
    13741 ggaaaggcgt tttccggttt tttcgtttcg ttttccggtg ctttccgcaa tcgccatccg
    13801 cttttccaca acgccgcacc tttttcgtgg ggagctgtag tagcaattat agtcgattaa
    13861 tacaacatat tgggttggga cgcattttaa agtctatata tagtgctttg catcaaggat
    13921 gtttgaactt tttttgatgt agctcaaagt aaaaagcaga gcgtacggat gacgggcgct
    13981 acagcgttat gtaaattttt taatgaattt gctggttgaa aaataaacaa aaacaacatg
    14041 ctgacagaca aaaccccgga atgaccggca ttaccggggc ttagggaaga tttacttctg
    14101 taaccaccag acagcctcaa aaggccgtaa attcatggca cagggttgtg gtgaggcttc
    14161 ttcgtagtta tgcatcacaa gctgccagtt gccgcgcatt tgccctggct gccagggttg
    14221 gatctcacgg ctaaggttgg caatgaccag caaggtttgc cccttccatt cacggcgata
    14281 gcaccacaat acagggctgt ttggcagcag atcctggtaa ttgccccatg tcaggatggc
    14341 ttcctgctta cgcagtgcga ttaacttttg gtaggtgtaa aacaccgagg aatcatcggc
    14401 cagcgcggct tctacgttga tttgttgata gttatcaccc aggccaatcc acggttcgcc
    14461 agccgtaaat ccggcattat cgccgttgct ccattgcatg ggcgtgcggc tgttgtcacg
    14521 ggatttactg gcgaggattg ccaataactc gtcggcatca cgaccatcgt tgcgcagctc
    14581 ggcaaacata ttgaggctct ctacgtcgcg atagtcagta atgcgcgtga aatgcgggtt
    14641 ggtcatgcca atctcttcgc cctggtagat atacggcgtt ccctgcatgc catgcagcac
    14701 catcgccagc atttttgccg caggcacgcg gtattcacct tcatcaccaa agcgagaaac
    14761 aatgcgcggc tgatcgtggt tacaccagaa caaggcattc catgctacgt tgtgcattcc
    14821 ttgttgccag tggcggaaca atgttttcaa cgccacaaag tcaggtttag ccagcgtcca
    14881 tttttcacca ccgggataat cgaccttcag gtgatgaaaa ttaaaggtca tcgacaattc
    14941 actgcctgtc agtgccgcgt atcgctggca atgctcaagg ctggtggagg acatttcacc
    15001 tacggtcatt aacccgcgtg gcgtaaacac atcgcggttc atctcgtgca aaaactcgtg
    15061 tgctcgtggc ccgtcggtgt agaagcgacg cccgtcgcca tccaggtcat cagggaaacg
    15121 cgggtctttg gagatcagat tcaccacatc caggcgcaac ccgtcgaccc cacgatcggc
    15181 ccagaactca cagacttttt tcagcactgc gcgtaccgct ggattctccc agttgagatc
    15241 cgcctgttct ggtgcaaaga gatgcaaata gtactgttcg ctttccgcat gccagcgcca
    15301 cgcactaccg ccaaattttg aacgccagtt gttcggtggc gtttctggtt ctccatcgcg
    15361 ccagatataa aactggcggt aagggctttc tttgttcagc gcctcgcgaa accaggcatg
    15421 ttgggtagag gtatggttaa acaccatatc gagaatgata cgaatcccgc gcgattttgc
    15481 ctgcgtcacc agttcgtcaa aatcgtccag cgtgccgtag gtgggatcaa tcgccgtata
    15541 gttcgctacg tcgtaaccgt tatcgacctg gggagagaca taaaaggggg ttagccagat
    15601 ggcatcaacg cccagtttat gcagatagtc caggcgttgg ataacgccac gtaaatcgcc
    15661 ggtaccgcta cccgtggtgt cctgaaaact ctttggataa atctggtaga taacgccgtt
    15721 ttgccaccag tggggaggat tagtcattac gttattcctg caaatgcgag ggggcgcaat
    15781 tgcgccccga agaaaattaa acaatgtcca gcgtgcccag gcggtatttc cgctgataga
    15841 taaacgaggt gagtacaatc gggatgatga tggcgatagc cattgccagc gcaaacacct
    15901 gccagtagtt cggttgaatc gagagaattc ccggcaggcc gcctacgccg atgccattcg
    15961 ccataacgcc gttcaggccg catagcaatc ctgccagacc agaaccaatc atcgcgcaca
    16021 gcatcgggaa gcgatatttc aggttgatgc cgtacattgc aggctcagtg accccaagcc
    16081 aggcggagat cgccgcaggc acggagatct cgcgttcatt gtgcttgcgg ctggaaatga
    16141 taatgccgat cacggcggag ccctgagcga tattcgacag cgcaatcagt ggccacactg
    16201 gcgtaccacc catgctttga atcatctgca aatcaatagc aagcgtggtc tggtgtaccc
    16261 cggtgatcac cagcggggcg tacaggaagc caaacaatgc cgcgccaatc ggagcaaagc
    16321 tgccggtcat caggtgacgt accgcaaagg caacgccatc gccaatcatg cgaccaaacg
    16381 gaccaatcag cgcatgggcg aggaacaccg cgaggatcag cgaacagacg ggcaccacca
    16441 ccagatagag gtaatctggc acgatgcgtt taaggcgagt ttcaataacg cccagcgcca
    16501 gcccggctaa cagtgccggg atcacctgcg cctgatagcc cactttggcg atgctgaaca
    16561 tgccaaagtc ccacacttcc ggcagctgct gcccgagcag ataagcgttc atcagttggg
    16621 gggaaaccag tgtcacgcca agcacgatac caaggatcgg tgtgccgccc atttttttca
    16681 ccgctgacca gcaaatcccg accggcaggt agaagaagat cgcttcaccg atcaaccaca
    16741 gaaaatcgta gatcgtttgc agggaagggt acatttgcgc cagcgtttga ccgttgctca
    16801 tgggcaaatc gccgatcaca ttgcgaaaac cgaggatcaa accgccgcta atcaacgcgg
    16861 gcagcaacgg gaagaaggtc tctgcgaaat gagagatcaa ctgctcatgc catttcatat
    16921 tctgccgggc ggcttttttt acctgctctt tatcaacctg cgcctgtccg gttgacgcta
    16981 tcagtgcttg atagtagtca cccacgttgg tgccaatcac cacctgaaat tgcctggcat
    17041 tggtgaaaca gcctttcacc atggggagtt gctcaatttc tttcggtctg gcattggccg
    17101 gttggttgag gacaaagcgt aggcgagtaa tacagtggct caccgtcgca atattgccgc
    17161 gcccgccgac cagttcaatc aaccgatcga tatccgtttg gtttattttg ctcatcataa
    17221 agccccatgg cagatgacat ttttggttgg ctgcagaata tattgcgcgg aaaaatttaa
    17281 aaacgggaac gttcccgaaa cgcagcgaag atcacaattt atcgttcagg aaacgatctg
    17341 gacagggtgg cggggatgat gatttgttgc ggttcgctgc gcccggttac ctgtgcgatc
    17401 aactggcagg ccgcctggcg tccagcttcg gcgtaaccgg gatctacggt gacgatctcc
    17461 ggatggagga atttcattaa cggcgtatta ccgacgctcg ccagttgcaa ggtgtcgatg
    17521 cgttgctctt gcaggtattt acttgcgcca agtgccagcg tgtcggttgc gcacagtaag
    17581 gcggtagttt caggcgtaat cacttttgct acgttctcat agccttgctt catagcaagg
    17641 cctggcagag cggcaacggg atgcagttta tgcgctttgc agaacgccag gtaggcttcg
    17701 tgacgtcgct taccggtcgt cacgtcactg tgcggcacgc cgagataact gatattacga
    17761 tgcccctggt catacagccg ttgcatcagg atcttgattg ccccttcgtc gtcataacag
    17821 accgaagcaa agccttttgc gtcacgcgcc agcagaacca gcgatgactg ccagtgggct
    17881 aacatttctt ctgttatgcc ggtaaaaccg aacagcacta cgccgtcgat attacgccgt
    17941 ttcagcaccc ccaaatgttc ggcaactaat tgcggggaaa actgactttc catcatgatt
    18001 gggtcgtaac cttgttcata gaactctggc agcatggttt gaacggcgag attttctgac
    18061 aacgaatcca ggcgggtaac aatgatggcg accactttat cgctttgccc acgcatagcg
    18121 cgcgcagagc gggaagggga aaatccatgc tgattcatca ctgcttcaac acgctcgcgg
    18181 gtgcgctggc tcacgccgct ttcgttattc agcacccggg aaactgtaga tttccccacg
    18241 ccgcttaagc gcgcgatgtc tttgatggtc agccgatttt gcatcctgtt gtcctgtaac
    18301 gtgttgttta attatttgag cctaacttta cccgtgcatt cagcaatggg taaagtctgg
    18361 tttatcgttg gtttagttgc cagcaggtat tatatcgcca tagatgctac gaatattatt
    18421 ggattctcct tattatttgc ggcgcttttt tcacttaccg gaggttatat ggaacctgat
    18481 cccacgcctc tccctcgacg gagattaaaa cttttccggt aagcccgtct tttcacggcg
    18541 ttaccggatg cgtaaggccg tgacgtttta acgtccctgc tcagctttat taccttcagg
    18601 taaggcttcg ccacgcctga agacatttct gtactgtttc agacagtgcg gagggactcc
    18661 ttatgtttaa agaaattttt acccggctca ttcgccattt accttcccgt ctggttcatc
    18721 gtgatccatt gcctggcgcg cagcagacag tgaatacggt ggtcccgccg tccttaagtg
    18781 cgcattgcct gaaaatggcg gtgatgcccg aagaagaatt gtggaaaacg ttcgacaccc
    18841 atccggaagg gttaaatcag gcggaagtgg aatctgcccg cgaacaacat ggtgaaaata
    18901 aattacccgc acaacaactg tcgccgtggt gggtacattt atgggtctgc tatcgcaacc
    18961 cctttaatat tttactcacc attctcggcg ctatttctta cgccacggaa gatttatttg
    19021 ctgcgggcgt tatcgcgcta atggtcgcta tttctacgtt gctgaacttt attcaggaag
    19081 cacgttccac taaagcggca gatgccctga aagcgatggt cagcaatacc gcgacggtgc
    19141 tgcgcgtaat taacgacaaa ggcgaaaatg gctggctgga gatcccgatc gaccagctgg
    19201 tgcccggcga tattataaaa ctggcggcgg gggatatgat cccggcagat ttacgtatct
    19261 tgcaagcgcg ggatctgttc gtcgctcagg cgtcgttaac cggtgagtct ctgcccgtgg
    19321 aaaaagccgc taccactcgc cagccggagc acagcaatcc gctggagtgc gacacgctgt
    19381 gttttatggg caccaccgtg gtgagcggca cggcacaagc aatggtgatt gctacaggtg
    19441 ccaatacctg gtttggtcaa ctggcggggc gtgttagtga gcaggaaagc gagccgaatg
    19501 cctttcagca agggatcagc cgcgtcagta tgctgctgat tcgctttatg ctggtgatgg
    19561 caccggtggt gctgttaatc aatggctaca ccaaaggcga ctggtgggaa gcggcgctgt
    19621 ttgcgctttc ggtcgcggta ggcctaacgc cggaaatgtt gccgatgatt gttacctcga
    19681 cgctggcgcg cggcgcagta aagctgtcga aacagaaagt gatcgtcaaa catctggatg
    19741 ctattcagaa ctttggcgca atggatattc tgtgcactga taaaaccggc accctgacgc
    19801 aggataaaat tgtgctggag aatcataccg atatctccgg taaaaccagc gaacgcgtgc
    19861 tgcatagcgc gtggttgaac agtcattatc agaccggact taaaaacctg ctcgatacag
    19921 cggtgctcga aggtacggat gaagagtcag cgcgctcgct ggccagtcgt tggcaaaaaa
    19981 tcgatgagat tccgtttgat ttcgagcgtc gccggatgtc ggtggtagtg gcagaaaata
    20041 ccgagcacca tcagctggtt tgcaaaggtg cattgcagga aatcctcaat gtgtgttcgc
    20101 aggtgcgtca caatggcgag attgtgccgc tcgatgacat catgctgcgt aagattaagc
    20161 gggttactga tacgctgaat cgtcaggggc tgcgcgtggt tgcggtggcg acgaaatacc
    20221 tgccagcgcg tgaaggagat taccagcggg cggatgaatc cgacctgatc ctcgaaggat
    20281 atattgcttt tcttgatccg ccaaaagaga caaccgctcc ggcactgaag gcattaaaag
    20341 cgagtggaat taccgtaaaa atccttactg gcgacagtga gttagttgca gcgaaagtgt
    20401 gccatgaagt ggggctggac gcgggagagg tggtcattgg tagtgatatt gaaacgctat
    20461 ctgacgacga actggcaaat cttgcacagc gcaccacgct gtttgcccgc ctgacgccga
    20521 tgcataaaga acgcattgtg accttactga agcgcgaagg gcatgtggtt ggctttatgg
    20581 gcgatggtat taatgatgcg cccgccttac gcgcggcgga tatcggcatt tctgtggacg
    20641 gcgcggtaga tattgcccgt gaagcggctg atatcatcct gctggaaaaa agcctgatgg
    20701 tgctggaaga gggggttatt gagggacgtc gcactttcgc caacatgctg aaatacatca
    20761 aaatgacggc gagttctaac tttggtaatg tgttcagcgt gctggtggcg agtgctttct
    20821 tgcccttcct gccgatgttg ccgttacact tgcttattca gaacctgctg tacgatgtgt
    20881 cacaggtggc gatcccgttt gataacgtcg acgacgagca aattcaaaag ccgcagcgtt
    20941 ggaatccggc ggatctgggg cgctttatga tcttcttcgg accgatcagc tcgatcttcg
    21001 atattctgac gttttgcctg atgtggtggg tattccatgc caacacgccg gaaacgcaaa
    21061 cgctgttcca gtcgggatgg tttgtggtgg gcttactgtc gcaaacgctg attgtgcata
    21121 tgatccgcac ccgccgtgtg ccgtttattc agagctgtgc atcgtggccg ttaatgatca
    21181 tgaccgtgat cgtgatgatt gtcgggatcg cattgccgtt ttcaccgctg gccagttatc
    21241 tgcaattaca ggcgttgccg ttaagctatt tcccgtggct ggttgcgatt ctggcagggt
    21301 atatgacgtt aacccagttg gtgaaaggat tttatagccg tcgttacggc tggcagtaaa
    21361 gaataaacta ggcatggtgg cccggattca gattgcagac aaagtgagtt ttgttcatgc
    21421 cggatgcggt gtaaacgcct aatccggcct acaaattcaa tcaattgcag gaatcacgta
    21481 ggcctgataa gcgtagcgca tcaggcgatt ttgcgtttgt catcagactt aatccgggca
    21541 tgatagcccg gatttccatc aagattagcg acgaatagcg atcgcttcga tctcaatctt
    21601 tacgtctttc ggcagacggg caacttcaac gcaagaacgt gccgggaagg tggcgttgtg
    21661 ttcggtgaag aaggcttcgt aagtggcgtt tacggttgcg aagtcgttca gatcttttac
    21721 aaacacggta gttttaacga tgtcgcccac tttcagacca gcggcttcga cgatcgcttt
    21781 tacgttatcc agcgactgac gtgcctgtgc agcgacgtct gccggtactt cgcccgtttt
    21841 cggatttacc gggatctgac cggaggtgat gatcatattt cccagatcaa cgccctgtac
    21901 gtaaggaccg atagctgctg gtgcattttc cgtcgcgata gttttgctca tgatttctcc
    21961 tttattacag cggtaaaaag tctggctcat tatagggagc cagactttta ttaccaaccg
    22021 caattaattg gccagcacca cattatggga aaactctttt tcacagtatt tgcatttgag
    22081 cgcgatgtca ttggcgcgtt ttcgcacggc aaagctggat gaaaccggtt cggcatggct
    22141 gatacagttg ctgttcgggc agaccaacac attgtcgatg cgctctggca gactggggcg
    22201 cgatttaccc accacttcat agttgtcgat acggttaacc gtggcttgcg gcgcatacaa
    22261 tgccagttga tctacctgat cttcactcaa aaaggtattt tcgattttga tcagatcttt
    22321 gcggcccatc tcgccagaag gcaggttcag accaatggtg atgcgctgat ccgtttcggt
    22381 cagcttgaac agactcaaca gcttaaaacc gatctgggcg gggatatggt caattaccgt
    22441 gccgcgttta atagcttcaa cctgcaattt attatcgtgt gtcatctcta tttcccctta
    22501 cagtaccaga tcgcgattca gaaccagtgc cagtaacgcc tggcgagcga aaatcccgtt
    22561 gcctgcctgc tggaagtacc aggcgtgtgg cgttttatca acatccgtcg caatttcatc
    22621 aacacgcggc agcggatgca gtactttcat attggctttg gcgttgtgga gatcgctggc
    22681 gcgaagaaca aactgcgctt tcacgttggc gtattcggat gggtccaggc gctctttttg
    22741 cacgcgggtc atatacagga tgtctacttc cgccatcact tcttcaatag agctgtgcag
    22801 actccatgcg atcccttttt catcgagcat atccagaatg tattgcggca ttgccagcgc
    22861 gtccggcgcg atgaagtaaa aacggttgcc gtcgaacttc gctaacgcct gagtcaggga
    22921 gtgaacggtg cggccatatt tcaggtcacc aaccattgcg acgtggagat tgtccagacg
    22981 cccctgggtt tcctgaatag tgaataagtc cagcaaggtt tgcgtcggat gttggttgga
    23041 gccatcaccg gcattcagta ccggtacatt gccggaaaac tcggtggcca ggcgcgccgc
    23101 accttcctgc ggatgacgca tcactatcgc atcgacgtaa gtgctgataa ccgaaatggt
    23161 atcggccagc gtttcgccct ttttacccag tgatgtattg gcgctgtcgg agaagcccac
    23221 cacgctggca cccaggcggt gcatggaagt ttcgaaagag aggcgggtac gggtagaggc
    23281 ttcgaagaag cagctggcaa tgactttgtg cttcaacagc tctgattgcg ggtttgcttt
    23341 cagttttgcc gctgttgcca gcaccagatt aaggtcatcg cgactaaggt cgtttatgga
    23401 aatgatatgt ttctgatata gcggattagc catcttttat ctcctgacgc ctgggcaaaa
    23461 aaaagcccct cgattgaggg gctgggaatg ggtgatcaac gggaagaaaa acggcaggcc
    23521 agcgtctttt ttcagacgcg gtaagacaaa atgtcgaaca cactgaacca tacatcctcc
    23581 cggcaaattg tccggcatta tactcatcgt cagaagcggt gcaagcaatt gatgcaatat
    23641 tttgtcagcg caaacggttt atttgaattt aaagttaaaa tatatgcatt tttatttact
    23701 gtgattctgg ggggaactgt cgttcggtat caataattgc agacatttcc tgcttttttc
    23761 tttttcactt tcacgcaatc agatatgcat tttattccat tcatccgact tatagggcgg
    23821 agtgtgaaaa cgaacggcta gcactattgc ttagagctca gggatgcgcg ctatcacttt
    23881 aatttcaaaa tcaaagcctg ccagccatgt aacgcccacc gccgtccagg ttggataaga
    23941 tggcgcgcta aatatttcat ttttcaccgt catgatgtct tcaaattgtt tttctggatc
    24001 ggtatgaaag ctcgtaacat caatgatatc gtcaaaagtg catcccgcag ctgccagggt
    24061 cgcatgcaaa ttatcaaagg ccagtctgac ttgttgctga aaatcgggtt ctggtgttcc
    24121 gtcctctcga cttcctactt gcccggaaac aaacagcaaa tcgccggaac gaatagccgc
    24181 agaataacga tgctcagcat acagtgaatg tcgtccagca gggaaaacag cggttctttc
    24241 taccatttgg ttatcctcaa gatttacgac atgaacagaa gatttatatt taccaggagc
    24301 cgcttttagc ggacgacgtg agtaaacaaa acccagacat catgggaaat ggctgggctt
    24361 aattgagcgt agtcggttat gcgccaaacg cgccatcaat ggtatgcatc gcgccggtaa
    24421 caaaactggc ttctggccct gctaaccatg cgaccatacc agcgacctct tccggttgcc
    24481 catgtctttt gatggccata aaactatgcg acatatcgcg cattggcccg ttggcgggat
    24541 tagcgtcggt atcaattggc cctggctgga cgacgttgat ggtgatccca cgcggtccga
    24601 aatcacgggc cagcccgcgc gccatgcctt gcagggcaga tttactggcg gcataagcag
    24661 ccatgcctgc aacaggcata cgatcgccat tcacggagcc gatgattaag atgcgtccgc
    24721 cttcgggcat ctgccgggcg gcttcaacag aggcatggta aggagcatga atattgattt
    24781 tgaaaaggcg atcaatatcg tcggcattta attccagggc atcgccaaag acgccaatac
    24841 ctgcatttac caccaggata tccaatgcgc cgctcttacg aacgacatca ataacagcgt
    24901 ctttgtcagc actatctgtg aatactgctg tcgctccagt ctcttgtgcc aggcgttcag
    24961 cggcatcttt cgaccccgca taggtgaatc gtacattggc cccatcggtg acgaaacgac
    25021 gtacgatagc ggcaccgatt ccacggctac caccgaggat gagaactgtc ttacctgtaa
    25081 aagcgcccat aaggactcct tgatttatta tgtaacatgc attacaaaac tgttttaact
    25141 ttctgtcaac aagttttgta atggtcacta aaaaacaatc tcgcgttcca ggtcgtccca
    25201 gacgtttcgc tcctgagcag gcagtctctg cggcaaaagt gctttttcac caaaaaggtt
    25261 tcgatgctgt cagtgttgct gaagttactg attatcttgg tattaacccc ccgagcctct
    25321 acgcggcttt tggcaataag gctgggttat ttagccgtgt actcaatgaa tatgtcggta
    25381 cggaagctat tccgcttgcc gatattcttc gtgatgatcg tccggtaggg gagtgcctgg
    25441 ctgaggtatt aaaagaagcg gcgcgccgat atagccaaaa cggcggctgc gctggctgta
    25501 tggttcttga aggcattcat agttatgatc cacaagcgcg tgatattgcc gttcaatatt
    25561 atcacgccgc agaaacgacc atttatgact atatcgccag gcggcatcca caaagcgcac
    25621 aatgtgtgac tgattttatg agtaccgtga tgtcagggct ttctgcgaag gcacgggagg
    25681 ggcactccat cgaacaactc tgtgcaacag ctgcactggc gggggaagcg ataaaaacta
    25741 ttctcaagga gtgatgcggg ccttgacccg aaaggcggga acgcgcctgc cgataagttg
    25801 tgataagaca ataattcacg cgttaaggct agcggaattg atcatctttt cgtataacga
    25861 tggaaatgaa acgttgtttt aattaaggag tggaaaagat gatcatcgga aatattcata
    25921 atcttcagcc gtggctaccc caggagttac gccaggcgat tgagcatatc aaagcacacg
    25981 ttacggcaga aacgccaaag ggcaagcacg atatcgaagg caatcgtctg ttttatctta
    26041 tctcggaaga tatgaccgag ccgcacgaag ctcgccgtgc ggagtaccat gcccgctatc
    26101 tcgacattca gattgtgtta aaaggtcagg aaggcatgac cttcagcacg caacctgcag
    26161 gcaccccgga taccgactgg ttagctgata aagacatcgc atttttgccg gaaggcgttg
    26221 atgagaaaac agttatcctt aatgaaggtg attttgttgt gttttatccg ggggaagtgc
    26281 ataaaccgct gtgcgcagtg ggcgcgccag cccgggttcg caaagcagta gtgaagatgc
    26341 tgatggcgtg atgacttttc gccgtaaata actccaggtt tacggcgagt ttgtgaaaag
    26401 agcgtttttt gatatttttt tgtgagtaaa atttgtaatg cttagacgtt cttattaact
    26461 caaggagttc gtcatgagca aaatatcaga tttgaattat tctcaacaca ttacattagc
    26521 cgacaatttt aaacaaaaaa gtgaagtttt aaatacctgg cgtgttggaa tgaataattt
    26581 tgcccgtaat gccgaggggc aggataacac aagaaatatc cttgatccta agacattttt
    26641 ggaatttttg gtaaaaatat ttactctagg ttatgtggat tttagcaaac gctccaacga
    26701 agcgggaaga aatatgatgg ctcatattga gtcctcatct tatatcaaaa ataatgatgg
    26761 cagtgagata ataaagtttg ttatgaataa tcctgaaggg gaacgagcgg atttatctaa
    26821 ggtggaaata gaaatcacac tttccacttt cactactatg gggactcgtc aaggacatac
    26881 ggctattata tttcaacaac ctgatggttc gactaatcgt tatgaaggaa agtcctttga
    26941 aagaaaagat gagagttcat tacacctgat tactaacaag attctggcat gttaccaacg
    27001 cgaagctaac aaggaaatag ctcgtctatt aaatatttca caggagttaa ataattctca
    27061 ggacttgaat aactcgcagg tgagttgtaa agattcagtt gattctacga ttacggattt
    27121 attagaaaaa ccattgaata atgcattatt agcaataagg aaagaacatc tgctattaat
    27181 gccttatgta tgtaatgaat cgatttcata cttgcttggt gaaaaaggga tactgaaaga
    27241 aatagatgac cttaacgcag taaataatta tcttcttaat aataagaaag ctactgacaa
    27301 tgaaattaat gacatcaaag ttaacctgtc tcatattctt attgattcct tagatgatgc
    27361 aaaagttaac cttacaccgg tcatcgattc tggatgactt ttttaaaatc cccatatatt
    27421 aatgatgtaa gaatactgga ttggtgtttt aataaaagaa tgcaatattt tggtgattct
    27481 gaaaagataa agtatgcatg ctccgtgata aatcatattg attttagccg cgatcaatct
    27541 aaagatttta gctgcgatca atctaaaatt aaaatagctg agaccttatt tttcaatctc
    27601 gataaagaac
//
LOCUS       DAJVUK010000040        27452 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.040, whole genome shotgun sequence.
ACCESSION   DAJVUK010000040 DAJVUK010000000
VERSION     DAJVUK010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27452
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.040"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            454..3639
                     /gene="rne"
                     /locus_tag="OQQ57_001600"
     CDS             454..3639
                     /gene="rne"
                     /locus_tag="OQQ57_001600"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HCS1956402.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA
                     QPGLLSRFFGALKALFSGSEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEVAETAEVVVAEPE
                     VVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPHHSDWQR
                     PTFAFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            complement(3836..4789)
                     /gene="flgL"
                     /locus_tag="OQQ57_001601"
     CDS             complement(3836..4789)
                     /gene="flgL"
                     /locus_tag="OQQ57_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HCS1956403.1"
                     /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI
                     AASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL
                     SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI
                     KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS
                     EADKEIAAAALDKTNRGLKNSLNNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMS
                     DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK"
     gene            complement(4801..6444)
                     /gene="flgK"
                     /locus_tag="OQQ57_001602"
     CDS             complement(4801..6444)
                     /gene="flgK"
                     /locus_tag="OQQ57_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HCS1956404.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEKDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            complement(6510..7451)
                     /gene="flgJ"
                     /locus_tag="OQQ57_001603"
                     /pseudo
     CDS             complement(6510..7451)
                     /gene="flgJ"
                     /locus_tag="OQQ57_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415599.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
     gene            complement(7451..8548)
                     /gene="flgI"
                     /locus_tag="OQQ57_001604"
     CDS             complement(7451..8548)
                     /gene="flgI"
                     /locus_tag="OQQ57_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HCS1956405.1"
                     /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG
                     LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT
                     IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL
                     NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA
                     RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
                     QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSARLNNVVRA
                     LNALGATPMDLMSILQSMQSAGCLRAKLEII"
     gene            complement(8560..9258)
                     /gene="flgH"
                     /locus_tag="OQQ57_001605"
     CDS             complement(8560..9258)
                     /gene="flgH"
                     /locus_tag="OQQ57_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HCS1956406.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVVDARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(9311..10093)
                     /gene="flgG"
                     /locus_tag="OQQ57_001606"
     CDS             complement(9311..10093)
                     /gene="flgG"
                     /locus_tag="OQQ57_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HCS1956407.1"
                     /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
                     LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
                     FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT
                     QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
                     VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMQQKLTQL"
     gene            complement(10231..10986)
                     /gene="flgF"
                     /locus_tag="OQQ57_001607"
     CDS             complement(10231..10986)
                     /gene="flgF"
                     /locus_tag="OQQ57_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgF"
                     /protein_id="HCS1956408.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
                     PVEGLSLPTRTLVTASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRN
                     GSIQVDPTGQLTIQGHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
                     LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMS
                     DMIASARRFEMQMKVISSVDDNAGRANQLLSMS"
     gene            complement(11006..12214)
                     /gene="flgE"
                     /locus_tag="OQQ57_001608"
     CDS             complement(11006..12214)
                     /gene="flgE"
                     /locus_tag="OQQ57_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HCS1956409.1"
                     /translation="MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA
                     GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL
                     DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS
                     SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP
                     NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV
                     ATPQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS
                     ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD
                     QILNTLVNLR"
     gene            complement(12239..12934)
                     /gene="flgD"
                     /locus_tag="OQQ57_001609"
     CDS             complement(12239..12934)
                     /gene="flgD"
                     /locus_tag="OQQ57_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HCS1956410.1"
                     /translation="MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLK
                     NQDPTNPMENNELTSQLAQISTVSGIEKLNTMLGSISGQIDNSQSLQASNLIGHGVMI
                     PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVH
                     SFTWDGTLTDGSTAPNGSYNVAITASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGT
                     YGTTTLDEVRQII"
     gene            complement(12946..13350)
                     /gene="flgC"
                     /locus_tag="OQQ57_001610"
     CDS             complement(12946..13350)
                     /gene="flgC"
                     /locus_tag="OQQ57_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HCS1956411.1"
                     /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM
                     VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
     gene            complement(13354..13683)
                     /gene="flgB"
                     /locus_tag="OQQ57_001611"
     CDS             complement(13354..13683)
                     /gene="flgB"
                     /locus_tag="OQQ57_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HCS1956412.1"
                     /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDID
                     FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYQMSLSALSGQIKGMM
                     NVLQSGN"
     gene            13839..14498
                     /gene="flgA"
                     /locus_tag="OQQ57_001612"
     CDS             13839..14498
                     /gene="flgA"
                     /locus_tag="OQQ57_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HCS1956413.1"
                     /translation="MLAIKRSVAIIAILFSPLSAASNLTSQLHTFFSAQLVGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTHFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMRMVSGLVVSGVVDADGNILIN
                     L"
     gene            14574..14903
                     /gene="flgM"
                     /locus_tag="OQQ57_001613"
     CDS             14574..14903
                     /gene="flgM"
                     /locus_tag="OQQ57_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HCS1956414.1"
                     /translation="MSIDRTSPLNPVSTVQPRETTDAPVTNTRAAKTTDSTSTSTSTS
                     TSTSTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDIGKIADALINEA
                     QQDLQSN"
     gene            14908..15324
                     /gene="flgN"
                     /locus_tag="OQQ57_001614"
     CDS             14908..15324
                     /gene="flgN"
                     /locus_tag="OQQ57_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HCS1956415.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(15364..16899)
                     /gene="murJ"
                     /locus_tag="OQQ57_001615"
     CDS             complement(15364..16899)
                     /gene="murJ"
                     /locus_tag="OQQ57_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HCS1956416.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(17066..17932)
                     /locus_tag="OQQ57_001616"
     CDS             complement(17066..17932)
                     /locus_tag="OQQ57_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCS1956417.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALP
                     ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC
                     VQNQTVPQTAGE"
     gene            complement(17934..18581)
                     /locus_tag="OQQ57_001617"
     CDS             complement(17934..18581)
                     /locus_tag="OQQ57_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceH family protein"
                     /protein_id="HCS1956418.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAELESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD"
     gene            complement(18592..19176)
                     /gene="rimJ"
                     /locus_tag="OQQ57_001618"
     CDS             complement(18592..19176)
                     /gene="rimJ"
                     /locus_tag="OQQ57_001618"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HCS1956419.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            19412..20614
                     /gene="mdtH"
                     /locus_tag="OQQ57_001619"
     CDS             19412..20614
                     /gene="mdtH"
                     /locus_tag="OQQ57_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HCS1956420.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLM
                     AGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMG
                     FSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKRAA
                     RRLLERDA"
     gene            20678..21325
                     /gene="grxB"
                     /locus_tag="OQQ57_001620"
     CDS             20678..21325
                     /gene="grxB"
                     /locus_tag="OQQ57_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HCS1956421.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            21459..22019
                     /locus_tag="OQQ57_001621"
     CDS             21459..22019
                     /locus_tag="OQQ57_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1956422.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            22125..23171
                     /gene="pyrC"
                     /locus_tag="OQQ57_001622"
     CDS             22125..23171
                     /gene="pyrC"
                     /locus_tag="OQQ57_001622"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HCS1956423.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVMPYTSEIYGRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREAHFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            23245..23490
                     /gene="dinI"
                     /locus_tag="OQQ57_001623"
     CDS             23245..23490
                     /gene="dinI"
                     /locus_tag="OQQ57_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HCS1956424.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGVTKEDKQRISEILQETWESADDWFVSE"
     gene            23780..24034
                     /gene="bssS"
                     /locus_tag="OQQ57_001624"
     CDS             23780..24034
                     /gene="bssS"
                     /locus_tag="OQQ57_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HCS1956425.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            24149..25267
                     /gene="solA"
                     /locus_tag="OQQ57_001625"
     CDS             24149..25267
                     /gene="solA"
                     /locus_tag="OQQ57_001625"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HCS1956426.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ"
     gene            25315..25428
                     /locus_tag="OQQ57_001626"
     CDS             25315..25428
                     /locus_tag="OQQ57_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceO family protein"
                     /protein_id="HCS1956427.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
     gene            25689..26255
                     /locus_tag="OQQ57_001627"
     CDS             25689..26255
                     /locus_tag="OQQ57_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HCS1956428.1"
                     /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFTLGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            26259..26834
                     /locus_tag="OQQ57_001628"
     CDS             26259..26834
                     /locus_tag="OQQ57_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HCS1956429.1"
                     /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFEDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY
                     PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(26876..>27452)
                     /locus_tag="OQQ57_001629"
     CDS             complement(26876..>27452)
                     /locus_tag="OQQ57_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HCS1956430.1"
                     /translation="EYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGG
                     IRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISD
                     EIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQR
                     RRRAGRENGNKIFNKSRGRLNTTLGIPDPTE"
BASE COUNT         6586 a         7312 c         6915 g         6639 t
ORIGIN      
        1 gggatgcgtt catataaaaa ctgtgagtaa gcgggtgata aatggtaaaa gtcatcttgc
       61 tataacaagg cttgcagtgg aataatgaag ccgtttccgt gtccatcctt gttaaaacaa
      121 gaaattttac ggaataaccc attttgcccg accgatcatc cacgcagcaa tggcgtaaga
      181 cgtattgatc tttcaggcag ttagcgggct gcgggttgca gtccttaccg gtagatggaa
      241 atatttctgg agagtaatac ccagtctgtt tctttgataa ttgcgctgtt tttccgcatg
      301 aaaaacgggc aaccgacact ctgcgcctct ttgagctgac gataaccgtg aggttggcga
      361 cgcgactaga cacgaggcca tcggttcaca cccggaaagg cgttactttg cccgcagctt
      421 agtcgtcaat gtaagaataa tgagtaagtt acgatgaaaa gaatgttaat caacgcaact
      481 cagcaggaag agttgcgcgt tgcccttgta gatgggcagc gtctgtatga cctggatatc
      541 gaaagtccag ggcacgagca gaaaaaggca aacatctaca aaggtaaaat cacccgcatt
      601 gaaccgagtc tggaagctgc ttttgttgat tacggcgctg aacgtcacgg tttcctccca
      661 ctaaaagaaa ttgcccgcga atatttccct gctaactaca gtgctcatgg tcgtcccaac
      721 attaaagatg tgttgcgtga aggtcaggaa gtcattgttc agatcgataa agaagagcgc
      781 ggcaacaaag gcgcggcatt aaccaccttt atcagtctgg cgggtagcta tctggttctg
      841 atgccgaaca acccgcgcgc gggtggcatt tctcgccgta tcgaaggcga cgaccgtacc
      901 gaattaaaag aagcactggc aagccttgaa ctgccggaag gcatggggct tatcgtgcgc
      961 accgctggcg tcggcaaatc tgctgaggcg ctgcaatggg atttaagctt ccgtctgaaa
     1021 cactgggaag ccatcaaaaa agccgctgaa agccgcccgg ccccgttcct gattcatcag
     1081 gagagcaacg taatcgttcg cgctttccgc gattacttac gccaggacat cggcgaaatc
     1141 cttatcgata acccgaaagt gctcgaactg gcacgtcagc atatcgctgc attaggtcgc
     1201 ccggatttca gcagcaaaat caaactgtac accggcgaga tcccgctgtt cagccactac
     1261 cagatcgagt cgcagatcga gtccgccttc cagcgtgaag tccgtctgcc gtccggtggt
     1321 tcgattgtta tcgacagtac cgaagcgtta actgccatcg acatcaactc cgcacgcgcg
     1381 acccgcggcg gcgatatcga agaaaccgcg tttaacacca acctcgaagc tgccgatgag
     1441 attgctcgtc agctgcgcct gcgtgacctc ggcggcctga ttgttatcga cttcatcgac
     1501 atgacgcctg tacgccacca gcgtgcggta gaaaaccgtc tgcgtgaagc ggtgcgtcag
     1561 gaccgtgcgc gtattcaaat cagccatatt tctcgctttg gcctgctgga aatgtcccgt
     1621 cagcgcctga gcccatcact gggtgaatcc agtcatcacg tttgtccgcg ttgttctggt
     1681 actggcaccg tgcgtgacaa cgaatcgctg tcgctctcta ttctgcgtct gatcgaagaa
     1741 gaagcgctga aagagaacac ccaggaagtt cacgccattg ttcctgtacc aatcgcttct
     1801 tacctgctga atgaaaaacg ttctgcggta aatgccattg aaactcgtca ggacggtgtg
     1861 cgctgcgtga ttgtgccaaa cgatcagatg gaaaccccgc actaccacgt gctgcgcgtg
     1921 cgtaaagggg aagaaacccc aaccttaagc tacatgctgc cgaagctgca tgaagaagcg
     1981 atggcgctgc cgtctgaaga agagttcgct gaacgtaagc gtccggaaca acctgcgctg
     2041 gcaacctttg ccatgccgga tgtgccgcca gcgccaacgc cagctgaacc tgccgcgcct
     2101 gttgtagctc cagcaccgaa agctgcaccg gcaacaccag cagctcctgc acaacctggg
     2161 ctgttgagcc gcttcttcgg cgcactgaaa gcgctgttca gcggtagtga agaaaccaaa
     2221 ccgaccgagc aaccagcacc gaaagcagaa gcgaaaccgg aacgtcaaca ggatcgtcgc
     2281 aagcctcgtc agaacaaccg ccgtgaccgt aatgagcgcc gcgacacccg tagtgaacgt
     2341 actgaaggca gcgataatcg cgaagaaaac cgtcgtaatc gtcgccaggc acagcagcag
     2401 actgccgaga cgcgtgagag ccgtcagcaa gctgaggtaa cggaaaaagc acgtaccacc
     2461 gacgagcagc aagcgccgcg tcgtgaacgt agccgccgcc gtaacgatga taaacgtcag
     2521 gcgcaacaag aagcgaaggc gctgaatgtt gaagagcaat ctgttcagga aaccgaacag
     2581 gaagaacgtg tacgtccggt tcagccgcgt cgtaaacagc gtcagctcaa tcagaaagtg
     2641 cgttacgagc aaagcgtagc cgaagaagcg gtagtcgcac cggtggttga agaaactgcc
     2701 gctgccgaac caattgttca ggaagctcca gctccacgca cagaactggt gaaagtcccg
     2761 ctgccagtcg tagcgcaaac tgcaccagaa cagcaagaag agaacaatgc tgataaccgt
     2821 gacaacggtg gcatgccgcg tcgttctcgc cgctcgcctc gtcacctgcg cgtgagtggt
     2881 cagcgtcgtc gtcgctatcg tgacgagcgt tatccaaccc agtcgccaat gccgttgacc
     2941 gtagcgtgcg cgtctccgga actggcctct ggcaaagtct ggatccgcta tccaattgta
     3001 cgtccgcaag atgtacaagt tgaagagcag cgcgaacagg aagaagtaca agtgcagccg
     3061 atggtgactg aggtccctgt cgccgccgct gtcgaaccgg ttgttagcgc gccagttgtt
     3121 gaagaaatgg ctgaagtcgt agaagccccc gtaccggttg ccgaaccgca accggaagtg
     3181 gttgaaacga cgcatcctga agtgattgcc gccgcggtaa ctgaacagcc gcaggtgatt
     3241 accgagtctg atgttgccgt agcccaggaa gttgcagaac acgcagaacc ggtggttgaa
     3301 ccgcaggaag agacggcaga tattgaagaa gttgccgaaa ctgctgaggt tgtggttgca
     3361 gaacctgaag ttgttgctca acctgccgcg ccagtcgtcg ctgaagtcgc agcagaagtt
     3421 gaaacggtag ccgcggttga accagagatc accgttgagc ataaccacgc taccgcgcca
     3481 atgacgcgcg ctccggcacc ggaatatgtt ccggaggcac cgcatcacag tgactggcag
     3541 cgccctactt ttgccttcga aggtaaaggt gccgcaggtg gtcatacggc aacgcatcat
     3601 gcctctgccg ctcctgcgcg tccgcaacct gttgagtaat aattagctca aagtaatcaa
     3661 gccctggtaa ctgccagggc ttttttattt catgtttgaa tcaacatatt aaaattcatc
     3721 aaatggcatc cttgctaacc aacaatgcaa aataggcaaa aaaaatgccc gccccggcga
     3781 tccctgagcg ggcagacaaa acatacccag tttcatgata tgttttaaag cgagcttatt
     3841 tgttgagctg gaagagcgac aatccctgca tatcggtaaa tgctttatac gatgcctgca
     3901 atgccgtttg ctgcatgatg taagatgaaa tagttgcatt ccagtccaca tcaaccagat
     3961 cgctcatctg ctgcgtttgc cctaaagcgc gatcgctacc taaggaatcc agcgactcca
     4021 gttcgttcag ctgcgtgcct aattccgcgc gaacggcaag gacattattc agcgagtttt
     4081 tcagtccacg gttggtttta tccaatgccg cagcggcgat ttctttatcc gcttcgctat
     4141 ccgcgaccgg cgttttcagg gctgcgatgg cgctatccag catggcaaaa agattggttt
     4201 cagaagcgct accgtctggc tccgcaactg cgttgctggt aatactgtcg aaaattttgt
     4261 cacccgtgtg ccctatcacc atcgaacgcg aagcatcgac ctgttgctta atactttctg
     4321 ctccaccgac gtatttccct ttctcttcgc taaacggcgc agtctctgtt ttataaccgg
     4381 caaaaatgta gcgcccgtta ccgtcagtgg tgttcgccag attcagcaac tggtcacgaa
     4441 gcccctgaat atccgtagcc agcgaggccc ggtcatcgtc actcaaggtg ccattgctgg
     4501 cgtagacaat tttttcctga gcattctgga tagcagtggt gacctggcta agtacactct
     4561 cttccagtga cactttttga atggcgaaag tacgcgccag cgtgtactgg ctgttttgcg
     4621 cctgtgcctg ggagagaact acggcttgtg atgctgcaat gggatcgtca gaagggttaa
     4681 cgactcgctt acctgtcgac atctgctcgc cgtacttcat ccattccgcc tgagaattgg
     4741 tgatgccacg catgttttgc tggtacatca tctgggtact gaaacgcatc ttatctcccc
     4801 ttagcgaatg ttaatcagcg catcaaaaat cgcgtttgcc gtctgcagaa cctgcgcatt
     4861 cgccaggtaa tactgctgaa aacgttgcag atttccgtac tcttcgtcga gattgacgcc
     4921 agagatagac tgctgctgat tggaaagctg cgtcaccaca ttaccttgcg tggcgctact
     4981 ggttttcaac gtcgcggttt tattaccgat atcactcact aacgaggcat aagcgtcgtt
     5041 aaaggatttc gcaccgccca ccgttttact gttgctttgc agatccagca gggcctgacc
     5101 gttgcggtta tcgctatcac ccgcatcttt ttcgctcgcc atcgctattt tcgcttcgtc
     5161 ggtgattaat acatccatgt tgacgatggc gtcacttact ggtttcagcg tgaagctgtc
     5221 gttaacggca ggcgttcctg taaacgtcaa ctccagacca tcaaatgcca ctttaccgtt
     5281 ggcatccggc gtcaccgtaa aagtggtatt gctggcaagg cgggtgacct gccactgatt
     5341 attatcgaac gagattttgt aatctgtcgc cagtaccgcg gaggcatcag ttaccgtggc
     5401 accgatcgca acgtcacctt tgtttttcgt gttttgcaaa accgcgggct taccgatagc
     5461 aaagaaatct tcaccagcat cgccgttggc atcaaatccg gctttgtgtt gggtgttgaa
     5521 agcctcagca aatgccagcg ccagttgtcc aagcgtatta cgcgtctggt ccagatcctg
     5581 agaacggaat gtcagaatgc cgcccagcga cccggtattc agtaatttct ccgggatctc
     5641 aatattgcct gccgtcccat caacgtaagc gacagtcgta cgagaagggt cggcgctgga
     5701 aggaactgcc gccagttgcc gcgccgtact tccctgaacc agtgagtaac cattggccat
     5761 cgtgatgtta taagtgccgc catcctgaac gctgacttct acaccaacaa tctggtttaa
     5821 ttcgctcacc agttgatcgc gttgatccag cagattgtta ggtgacgccc ctgcccccac
     5881 gcctgtcagg cgggagattt ggtcgttcag gctggcgatt tgtttagcgt aattgttgat
     5941 ctgatcaacg ctggcaccta tcgcgatatt gacctgtttg tcctggtcgc gaagatactg
     6001 atcggtggtt ttaaactgat tcaccaaccc ttctgatttc ccaatcagcg cctggcgcgc
     6061 tgccgggtct tccgcgttac tcaccagcgt ttgcaggctg gtgaagaaat cctgcatctg
     6121 tgttgccagc gaagaggtac tggtggagag catattgtcg attttcgaca tctgctcata
     6181 gcgggcagtc aggccgctac tttgcgtctg cgccgcacgt aactggttgg tgataaacgc
     6241 atcatactca cgctgcacac cagaaacgta gacaccattg ccaacccagc cgccagcgcc
     6301 caacgtgcta ttggcctgcg ccataatagt ggtttggcgg gtatatccgg caacgttata
     6361 gctggagata ttattacttg ccgtatttaa cgccgcctgg gccgcgttca gtccgctcat
     6421 ggcgttatta atcaagctgg acatggaggt tccttataag ccttcaatta cagagtatta
     6481 tcggcagcga cccgccggac ttgagttatt caaaacagat tatcaatgtt catactgtag
     6541 gttttgctca ccttgtcgct tatcgatttc atctgctgaa tcatgttggt gagtttgcgg
     6601 gcatagtgag gatcggtggc atagcccgcg tcctgtaggg cctgcgcccc ctgctccgca
     6661 ctcgtggcgg tggtcacggc ggcgtagcgc gggttacgcg ttaacagccc aacgtaatcc
     6721 gactatgctt ccagatacga gctgtagacc cgaaacttcg cttttacttt cttcgcttcg
     6781 ccgttttcat attcagtcgt ggtgatttca gtaactggcc ctttccagtt gccagaggct
     6841 ttgacaccaa acaggttata gctcggctcg ccgttttcgc ggcggatttg ccgttgcccc
     6901 caaccagatt ccagcgccgc ctgagcgagg atcaaatgat gtggcacacc gctttgctgg
     6961 cttgccagtt gggcgggcag cgagagttgc gcgaggaatg ctttactgtc acccggcagc
     7021 gaatcatcgt agttacgtgg cacggccttt tgcaccagct gcgaaagcgc ctgattttga
     7081 taacgcacca cagtttcgag cgggaatttc atcggtgctg ctggcgtgga ctcctctggc
     7141 aatggttgtt ctggcgtcat ctgtttaacc atcatctctg caagccccag acctttgccc
     7201 gccgtcatct gttgggcaat ctgctggtca tacatactgg tatacaggcg agtgtgctcg
     7261 ctgctgaaca ggccatcttt tggtaaagcg tcgcgcatgc ttttcaacat catctgcacg
     7321 aacatccctt ccacctgacg ggccaccgga cggatatttg ccgccggatc ttcgcccgct
     7381 ttcgccttta gttcgttgag tgattgcgca tcccaggccg cacttgccag tagtttgcta
     7441 tcgctgatca tcagatgatt tccagttttg cccgcagaca tcccgcactt tgcattgatt
     7501 gcagtatgga catcagatcc atcggcgtag cgcccagcgc attgagcgcg cgcaccacgt
     7561 tattgagcct ggcgctggaa cgtacgcttt gcagcgaacc gccgctctgg cgtaaatcga
     7621 tctgcgtttg tggagtaacc acagtctgtc caccaccaaa cggtgtatct ggctggctga
     7681 cattggcctg acgattaact gttactgaga gattcccctg cgctaccgcg cagctgtcga
     7741 gggtcacttc gcgattcatc accaccgaac cggtgcgcga gttaatcact actttagcgt
     7801 cctgcggggt gacattaacc tgcatattct ggatatcggc aaggaagcgg acctgggaac
     7861 tgttgccact cggtacgcgc acctgaatag tccgcgcatc taacgcggtg gcgctgccat
     7921 atccacgcac gcggttgatg gtgtcagcga tttgctgcgc catgctgaaa tcttcgtcgt
     7981 taagttgcaa attaagggta ttcccgacgc caaactggct gggcaattca cgttcaataa
     8041 ccgcaccatt ggtgatccgt ccaccgttca gttggttaac ctgaacactg ctaccgccag
     8101 cggaggctcc tgcgccgcca accagaatat tgccctgcgc cagcgcatac acctgactgt
     8161 caacgccctt aagcggtgtc atcaacaacg tacctccacg caagcttttg gcattaccca
     8221 tggaagaaac caccacatcg atggtttgcc cctgacgtcc aaacggagga agtgacgctg
     8281 tcaccattac cgcagcgacg ttttttagct gcatattggt gcccgtcgga acggtaattc
     8341 ccagctgtga gagcatgtta ttaagcgttt gtgtggtaaa cggcgtctgg gttgtctggt
     8401 caccggtgcc atccagcccc accaccagac catagccaat cagtgagttt tgccttaccc
     8461 cctgaacact ggtgagatcg cgaatacgct cagcctgagc cgccgtcgtg accagtagaa
     8521 gaattaatgc agagagaaat ttaatcacca cagcctcact tacattggcg acaggttaag
     8581 gaagaaacgc tgcaaccagc ccatattttg cgcttcgtta atgtagccat tgcctacgta
     8641 ttcaatgcgc gcatccacca cctgagtaga cggtacggta ttgctgccgc tgatagtgcg
     8701 tggattaacc acgccagaga agcgaataaa ttcggtaccc tgattaatgg caatctgttt
     8761 ttcacccacc acatgcaggt tgccgttgac cagtacctgg tcaaccgtca ccgtcaacgt
     8821 gccgctaaag gtattgctgg cattggcccc gccctttccg ttgaacgtgt taccaccgga
     8881 ggcttcgaca tcggcacgag cgttaccaaa cagcccctgc aaatagcgcg gcacagtatc
     8941 aaagccaaaa ttagttttac cgtcacggct ggcattcgca gaggagcttt tgctggcgct
     9001 gacgttctcc tgcaacacga tggtcagcgt atcgccaata ttgcgtggtc gacgatcttc
     9061 aaacagcggt tgatagccat agttaatcgg ctgagcagac tggaaaatag aaccgttggc
     9121 gacgggcgtc ggaccgggaa ccggttgtgc actggtcgcc ccctgcacca gcggcgtgga
     9181 gggtatccag gcgcagccgg ttagtgaaag caccaacaag ctggaaatgg cataagtatg
     9241 cgcagcgttt ttttgcatgg ctatcatctt caaaaatcag taaaccggtg aacctgccac
     9301 cggttaagcc ttagagttgc gtcagttttt gctgcatctg atcggtggtg gacaccgctt
     9361 tactgttgat ttcgtaagcg cgttgcacct gaatcatatt gaccagttct tccgccacgt
     9421 tgacgttaga cgtttcaaca tacccttgat acagcaatcc cgcgccgttc aggcccggcg
     9481 tgctttcgtt cggtgcacca gaggattgcg tttcggtgta gaggttttcg ccaatgctct
     9541 ccagcccggt gtcattcata aaggtggtga gattgagctg cccaacctga accggagctg
     9601 cctggccttg ttgggttacg ctgaccacgc catcacgacc gatggtgata cttaacgcat
     9661 tcgccggaat ggtgatcgct ggctgcacct gaaaaccacc agccgtcacc agctgcccgt
     9721 tctgatccac ctggaaagag ccgtcacggg tataggctga tgaaccatct ggcaacatca
     9781 cctggaaaaa gccctgccct ttaatcgcga catctttgct gttgttggtc tgcgacagat
     9841 ttccctggct gtgtaagcgt tcagtggcga ccgggcgtac ccccgtgccg atttgtaatc
     9901 cggagggtaa ggtggtttgt tcggaagact gtgcccccgg ctggcgaatg gtttgataaa
     9961 gcagatcttc aaacaccgcg cgctgacgct taaaaccgtt agtactgacg tttgccaggt
    10021 tgttggcaat gacgtccata ttggtttgct gggcgtcaag gcccgttttg gcgatccata
    10081 atgaactgat cataaaatgt cctgtagtgg attagtgaca agcagagcag aagcacgcga
    10141 cagtgtgaat tccccctcac tctaaccctc tccccaaagg ggcgagggaa tagtccgcgc
    10201 gcttttattg caatgtcatc aatcgttcaa ttaactcatc gacagcagtt ggttggcacg
    10261 gcctgcgtta tcatcgacgc tgctgatcac cttcatctgc atttcaaaac gccgcgcgct
    10321 ggcaatcatg tcgctcattg ccgcaacggc attgacgtta ctgccttcca gaacccccga
    10381 catcacacgc aaggttggat ctgcctgcag taccggccct cgcgtggcct gggtttctgc
    10441 gcttaaacga aaaatgccgt cgtcaccgcg ctgcacttcg ctgcccgtgg ctttcaccag
    10501 tttcagacgc cctactggcg caactgtatt tgccggatcg cccggattga gcgccgagat
    10561 tgtgccatcg gcagcaatag tgatttccgc tccttccggc acagcaattg gccccgcctc
    10621 gcctatcacc tgatgcccct gaattgtcag ttgcccggtg ggatcaacct gaatgctgcc
    10681 attacgcgta tacccttcgc tgccgtcagc ggtctgcacg gccagccagc catcctgctg
    10741 caacgcaacg tccagcgggc gcgaggtgta atctatcttg ccgggcgtca tgtctgcacc
    10801 cggtgttgac gccgttacca gcgtgcgcgt gggcagtgaa agcccttcca ccggcactgc
    10861 gcgcaaggcg tttaactgcg cgcgaaaacc gggcgtagag gcattggcca gattactggc
    10921 ggttaccgcc tgttgattca gcgtctggct ggctgctccc atcgcagtat aaattgcgtg
    10981 atccattgag ctatcccgtc agcgattagc gtaagttaac cagcgtgttg aggatctggt
    11041 cctgggtttt gatggtctgg gcgttagact gatagttacg ctgggcaacg atcatattga
    11101 ccagttcttt actgagatcg acgttggacg cttccagcgc accgttggtc agggtgccaa
    11161 agtttcccgt cccggctgtc cccaacagcg ccacgccaga agattgcgtc gcagaccaga
    11221 cgttgtcgcc ttcggatgcc agaccttcgt tgttggcaaa gttcgccagt acaatctgcc
    11281 ccagcagttg agtttgttcg ttggaatagt tgccgacaac cgtaccgtca tcattgattt
    11341 gataactcac cagatcgccc ggtttgtagc cgttctgggg ggttgccaca atattgttag
    11401 cgccggtatt ttgctgcatg gagttgagga agctcagact aaacgtggcg ggttctgcac
    11461 cgttaattgc gccggttgcg atattattcg ccatcgcacc atccactaat gtgccattag
    11521 cattaaattc cagtgttgtc gctgtcttcg caatgctgtt tggatcactg ctatcctggg
    11581 tgtagacctg ccagttatta tccccggtct tcacaaagta gacgctcatg tcatgagcat
    11641 taccctgact gtcgaaaaca gtcaccgaac cttttttgtt atagctatcc gcattgctgg
    11701 cgctgaatgg cgtaacagta ggaagcggat cactggaatt caggttgatc tgcatcgacg
    11761 ccgtggtggt agttttcgct gccatcaggg tattcgggat cgaaatattg gtcggattcg
    11821 ccccttgctg aatagtcggc ggcgtaccgg ttgccgggta acccgtcagc tgtaaacctt
    11881 gcatattcac caggttacgg ttttcatcca gcttaaattg tccgttacgg ctgtagaaca
    11941 ccgaaccgtt gctgtctacc agacggaaaa aaccgttctg gctgatagca acgtccagac
    12001 ctcgcccggt gttggtggtc gtgccatctg taaagtcctg agtgataccg gcaactttta
    12061 cccccagtcc cactttcgaa ccggcaaaca tatcggcaaa agaggccgtg cctgatttaa
    12121 agccgtaggt ggcggagttg gcaatattgt tgccaataac atcgaggtta gtggcggcag
    12181 cgtttaatcc gctaaccgct tgagaaaagg ccatgactga ctcctgaaat gtgaaggctt
    12241 aaattatctg ccgtacttcg tcgagggtgg tggtgccgta agtgccgaga tccagcgtat
    12301 taccgctgtt gccgcggatc acaccctgca ccagagcaaa ctgcagcggc tgggcaacca
    12361 gttgtgtacc accgttactg gcggtaatcg ctacattgta agaaccgttc ggcgcagtgc
    12421 tgccatcagt caacgtaccg tcccaggtga aactgtgaac tccggcggtc agttcaccaa
    12481 tatcaatggt gcgcacaacc gcgccatttt tatcggtgat ggtggccgta actttgtctg
    12541 ccgcctgttg cagctcaaca ccaaacggcg tggtcgtggt cacagcccct tcttcactgc
    12601 cggttcccgc aagaacagtt gtgccgggga tcatcacgcc gtgaccgatc aggttactgg
    12661 cctgtaacga ctggctgtta tcaatctgtc cggaaataga tccgagcatg gtattgagtt
    12721 tttcaatccc gctgaccgtg ctgatttgtg ccaattgcga cgtcagctcg ttgttttcca
    12781 ttggattggt cgggtcctgg tttttcagct gcgccaccag caaagtcaga aaactgcttt
    12841 gtaaatctgc ggcgttgctg cccgtgagcg aactactgct ggtggtactg acgccggtat
    12901 ttgtcggatc ggtggtggtt accgcaatgg acatagcttt ctcctttatt gaccgagcgt
    12961 aagggttttc agcatcatgc ttttcaccgt gttgagcact tcaacattgg cctgatagct
    13021 gcgtgacgcc gacatggtgt taaccatctc tccgacaaca tcaacgttcg gcatttttac
    13081 gtagcccttt gcatccgcca gcggattacc cggttcataa accagtttgt ccggggcctg
    13141 actttctata acatcggcaa cctttacgcc gcctgtcgca gcacctggtg cagcgttaac
    13201 ctggaatacc acctgttttg cccgatatgg ctgtccatcg ggaccggtca cgctatcagc
    13261 attcgccaga ttactggccg ccacgttcag gcgctgggac tgggcagtta acgccgaccc
    13321 ggcgatatca aaaatattca gcagtgccat ccgttaattt ccgctctgta aaacgttcat
    13381 catgcctttg atttgcccgc tcaacgcact aaggctcatc tggtattgca gttctgcggt
    13441 aggaggcgtc agcgcctgcg ccggaatgtg ttgcgttgag gtcatcgtca gagcaaccac
    13501 actggttgca tcccgtccac gttgcatgac ttttttaagt tcactggcaa aatcgatatc
    13561 gcgcgcctga taaccaaggg tatcggcatt ggcgatgttt gctgccagca cttcctgacg
    13621 ctgggcgcgc agattgagcg cctcttgttg aaaacgtaag gcggcgtcga gcttatcgag
    13681 catatctcct ccgcaggtat caaaattctg ccatcagctt aaatgccttt acgcgcgcgt
    13741 tatcggcgga ataaacgcaa aatgggtcgc tatttatgcc gttgatgacc attggggacg
    13801 ggtacaattc acgttgtaga aatagctggg gggcgaaaat gctggcaata aaacgtagcg
    13861 tggcgatcat cgcgatactg ttcagtccgt taagtgcggc gagcaatctc acatcgcaat
    13921 tgcacacctt ttttagcgcc cagctcgtgg gggtaagtga tgaggttcgt gtttctattc
    13981 gtacagcacc caatctacta ccgccgtgcg agcagccatt gctttcgatg agcaataatt
    14041 cccgcctgtg gggcaatgtg aatgtgttgg cacgctgcgg taacgacaaa cgatatttac
    14101 aggttaatgt gcaggccaca ggaaattatg tggttgccgc gatgcccatt gtgcggggag
    14161 gaaagctgga agctggcaat gtcaaactaa aacgcggacg actggatacc ctgccaccgc
    14221 gtacggtgct ggatatcaat caacttgttg atgccattag cctacgcgat ctatcacccg
    14281 atcaaccaat ccaattaacc cattttcgcc aggcatggcg ggtaaaagcg ggacaacgcg
    14341 tcaacgtgat cgccagcggt gacgggttta gcgccaacgc agaaggtcag gcgctgaaca
    14401 atgcagccgt cgcacagaat gcgcggatgc gcatggtatc gggactggtg gtcagcggcg
    14461 ttgttgatgc agatgggaat attcttataa acctgtaagc tgttaaagat tacccgtccc
    14521 ttgccgataa ataagcaaca catgataaaa gcgccctcaa tgaggaataa accatgagta
    14581 ttgatcgcac ttcgcctctg aatcccgtaa gcaccgttca accgcgcgaa accactgacg
    14641 cgccggtaac gaacacccgg gcggcaaaaa caaccgactc caccagcacc agcaccagca
    14701 ccagcaccag caccagcacc agcaccagtg tgacgttaag cgacgcgcaa gcaaaactga
    14761 tgcaacccgg cagcagtgat atcaatcttg aacgtgtcga agcgttaaaa ctggcgattc
    14821 gtaacggtga actaaaaatg gacatcggca aaattgccga tgcgctgatc aacgaagctc
    14881 agcaagactt gcagagtaac tgatcgtatg acacgtcttg cagagatcct tgaccagatg
    14941 tccgctgtgc ttaacgatct caaaacggta atggatcaag agcagcaaca tctctctatg
    15001 gggcagatca acggcagcca gttgcaatgg attacagaac aaaaaagctc actgctggcg
    15061 acgctggatt acctcgaaca gttacgcaag aaagaaccca atacagcaaa tagcgttgat
    15121 attagtcaac gctggcagga aattactgtg aaaacgcagc aactacgcca aatgaatcaa
    15181 cataacggtt ggttactgga aggacagatt gagcgcaatc aacaggcgct ggaaatgttg
    15241 aaaccgcatc aggaaccgac gctatatggg gcgaacggtc agacctcaac aacccatcgc
    15301 ggcggtaaaa agatttcgat ctgaagatta tctccggcct gcactgcagg ccggaatgca
    15361 ttgttacacc gtccggcggg caaattcttt aactttgaag cccagtaccg ccagtgcagc
    15421 gaagtacgcg gcaatccccg ccagcacgac cgccattaaa cgcagtaagc gccagggcat
    15481 ggtacccaat gaccactccg gcatgatatg taacatacct aaaagcacgc cagacatcac
    15541 cagtaccgcc accaccagac gcaacagaaa cgccatccag ccgggttgcg gagtaaagat
    15601 tttctgctta cgcaactgcc agtaaagcag cgaagcattc agacacgccg ccagaccaat
    15661 agaaagtgac agcccggcat gtttcaacgg accaataaac gccaggttca tcaattgcgt
    15721 taaaatcagc gtaacgatgg caattttcac tggcgtttta atgtcctggc gggaataaaa
    15781 gccaggagcc aacactttca ctacaatcag gccaatcaaa cccaccgagt aggcaattaa
    15841 cgcccgctgg gtcatcagcg catcaaacgc ggtaaattta ccgtactgga acagcgaaac
    15901 ggttaacgga cctgaaagaa tgcccaacgc aaccgcactc ggcagcgcca acaggaaaca
    15961 aagacgcaac ccccagtcca tcaaacggtt gtattcatca tgattgccac tggcaaaact
    16021 tttcgacagc gacggcagca aaatggtgcc aagcgccacg cccagcacac cggacggaaa
    16081 ctccattaag cggtcggcgt aatacatcca agacaccgaa ccggaagcaa gaaacgaggc
    16141 aaaaatggtg ttgatgatta aggagatctg gctcacagag acgccaagga tcgccggtcc
    16201 catctgtttc accacgcgca ttgctccggc atcgtggaag ttaatgcgcg gcaggaccag
    16261 catgccgatc ttcttcaggt gcggtagctg atacaccagc tgcaggatgc cgccgaccgt
    16321 aacagcccac gccagcgcca gcaccggtgg gttaaagtac ggtgcggcaa acagcgcgaa
    16381 accaatcatg ctgatgttaa gcagtgttgg cgcaaacgcc ggaatcgaga agcggttcca
    16441 cgtattcaga atcgctccca ccagcgacgc cagggagatc agcaagatat agggaaaggt
    16501 aatctttagt agctggctgg tcagggcaaa tttgtcagct gtatcagcga agcctggcgc
    16561 ggtcaccatg atcacccacg gtgcggcgag catgccagcg accgtcacaa ccgccagcgc
    16621 aagtgtcagc aggccagaaa cataagagac aaagacccgc gtggcgtctt caccctgctt
    16681 acttttatat tccgccagaa tcggtacaaa tgcctgggaa aatgcccctt cggcaaagat
    16741 acggcgtaac aagttaggaa gtttaaaagc gacgaaaaag gcgtcggttg ccatccctgc
    16801 gccaaagatt ctggcgacaa ttgcgtctcg tgcgaagcca agcacacgcg aaaacatggt
    16861 catcgagctg acggcggcca gcgattttaa taaattcatc ggtgttctaa tccagaccaa
    16921 cgggcaaaac gcctgcaaga caggcgctga aagaggcgaa tagtctacct ggattatggt
    16981 gaattgctac cgccagatgt tacagggttt attcactcat cgcatcgcgc cagatcttgt
    17041 caacgatacg ttgcgccagc acggcctatt cgccggcggt ttgcggaact gtctgatttt
    17101 gcacacattc aatgaagtgc cgcgcacagc cgacaaatcc acgttgttca agagtgctct
    17161 gccaaccagg aatcggttta tgcactacgc cctgcccgcg ctcctcacgc cattcgcgca
    17221 tatccgtaat gtcgatgagc gcaccgtcag tcacggcctg cacggtttca cgctgacttc
    17281 cggcacggcg atgcatacag gtggtgatct gcaaaggacc ggccgaaaaa tggtgctcgg
    17341 caaacagcat ttcgccagcg tcgttagtca gtagcgtacc gccatccaga gaggctttgc
    17401 cgcccgacaa ccacagcgcg gtatccacca catgcagata atcatccagc aacgtgaaat
    17461 aaagatcgtg tggcccgaca ctattgctac gatgtttatc cattcttagc gaagctgcgg
    17521 tagcgagttg cgtttttaac tcaccgtaga gtggtgcgaa acgacggtta aaaccgacca
    17581 tcaacgtcag ttttttccgc gccgccagtt ccaccagccg ttcagcatcg cgcagatttt
    17641 ctgccagcgg tttatcgaca cagacatgta cacccgcatt gagtaacgta ctgaccacgt
    17701 caaagtggct ggcggtgctg gaatgcacaa aaaccgcatc gcaactggcg gcaaggctgg
    17761 ataacgaatc ggcataagga atgcgccagc tttcacaaat tggcagggct ttcgcgcgcg
    17821 taggcgacca ggctccttgt aacatccagt cagacgctgc cgccagcacc ggtaaccacg
    17881 ctttttgcgc aatgccgcct aatcccacaa cgccgatacg taattttttc actttaatct
    17941 cccagatggg ccagcaacga atcaagacgc tgtttcagtt ctgccacttc gatttccagg
    18001 gcttcgacgc gggcctgtaa atcaccatca accgcgttcg acatatccgt taccgccggc
    18061 tgatcctcta cctcaccact gaaaagatgc atgtagcggc tttcgcgttt acccggttcg
    18121 cgggccagac gcaccacaaa aggaccatct tcgcgatttg ccagttgttc cagcgtcgac
    18181 tccaattccg ccatatcgct gaattcatac attcgcgcgg cgcggctgcg cagttcaccc
    18241 ggcgtctggg caccacgcaa taacaacgtg gtgattaacg ccacttccgc tgcgctcagt
    18301 ttcagatcgc caaattctga attacaaaaa cgttgttcat atttggtgac ccgattacca
    18361 aagccactca ccgtgcgcag ataatggcgt ttgaccagat tatccagttg ctcctgcact
    18421 tcagattcac tcagattcat gaccggttca cggttcgttt tctgattaca ggccgtgact
    18481 acaccattga ctgagagcgg gtattgctcc ggcgtggtca cctgcttttc cagcaagcaa
    18541 ccaatcacgc gagcttcaag ggcagtaagt tgatatttca tgagattctc cttagcggcc
    18601 gggcgtccag tctggggtag ttaatgccgt cagtacgtga tcgcgccatt gtccatcaat
    18661 caacagatag tctttcgcat agccttcttt ttcaaaaccc agtcgcgcca gtaaatcacc
    18721 gctgcgttta ttgtgcggca tataattagc cataatgcga tgaatatgtt gggtgcgctg
    18781 catataacga atggctgcgg tcagggcttc aaacatgagt cctttgccct gccatttttg
    18841 cccaatcgaa taaccgagat agcaggcatg aaaagagcca cgaacaacat tggaaaaatt
    18901 ggcaacgcca ataatctctt tttcgtccgg gtcgaataag ccaaagtaga aagctgaacc
    18961 ttgtttatga aattcgttaa tcatccccag cctggcctgc cagcctgatg gataacagtg
    19021 gctttcgtcg cgcactggct cccagggctt gaggaaatgg cgattctctg cgtaataatc
    19081 cgcaagacgc caggcatcac gatcatgcac cagacgcacg accagtcggt ctgtggttaa
    19141 gcgcactttt ggcacgttac tgcgatagcc aaacattcta tacctactcc ttcccgtaac
    19201 gtctttaata cgctgtaagt attactatac ctgcgcaacc agaccctgtg aaaagtccaa
    19261 aatgccattt tctgcattat tcacatattt gataaaaact ctctatcaaa gcgacgtttt
    19321 gataaaaaaa tattgtcccc gaagtgatgg gaaaagtctt agcggcaatg cagaatagaa
    19381 agtgctcatc ttttatttcc cgggagggga aatgtcccgc gtatcgcagg cgaggaacct
    19441 gggtaaatat ttcctgctca tcgataatat gctggtcgtg ctggggttct ttgttgtctt
    19501 cccgctgatc tctatccgct tcgttgatca aatgggctgg gccgccgtca tggtcggtat
    19561 tgctctcggt ctacgccagt ttattcagca aggtctgggt attttcggcg gcgcaattgc
    19621 cgaccgcttt ggtgccaaac cgatgattgt taccggtatg ctgatgcgcg ccgccggatt
    19681 cgccacaatg ggtatcgccc acgaaccgtg gctattgtgg ttttcatgcc tgctctcggg
    19741 actcggcggc acgttgtttg atccgccgcg ttcggcgctg gtggtgaaac taatccgtcc
    19801 acaacaacgt ggtcgttttt tctcgctgtt gatgatgcag gacagtgccg gtgcggtcat
    19861 tggcgcattg ttggggagct ggctgttgca atacgacttt cgcctggtct gcgccacagg
    19921 ggccgttttg tttgtgctgt gtgcggcgtt caatgcgtgg ttgttaccgg catggaaact
    19981 ctccaccgta cgcacgcccg ttcgcgaagg catgacccgc gtgatgcgtg acaagcgttt
    20041 tgtcacctat gtcctgacgc tggcgggtta ctacatgctg gctgtacaag tgatgctgcc
    20101 aattatggtc aacgacgtgg ctggcgcgcc ctctgccgtt aaatggatgt atgccattga
    20161 agcgtgtctg tcgttaacgt tgctctaccc tatcgcccgc tggagtgaaa agcattttcg
    20221 tctggaacac cggttgatgg ctgggctgtt gataatgtca ttaagcatga tgccggtggg
    20281 catggtcagc ggcctgcaac aacttttcac cctgatttgt ctgttttata tcgggtcgat
    20341 cattgccgag cctgcgcgtg aaaccttaag tgcttcgctg gcggacgcaa gagctcgcgg
    20401 cagctatatg gggtttagcc gtctgggtct ggcgattggc ggcgctattg gttatatcgg
    20461 tggtggctgg ctgtttgacc tgggcaaatc ggcgcaccag ccagagcttc cgtggatgat
    20521 gctgggaatt attggcatct tcactttcct tgcgctgggt tggcagttta gtcagaaacg
    20581 cgccgcgcgt cgtttgctgg aacgcgacgc ctgatttgat actcccccct gactcctcca
    20641 tactgaaagt gaactgacag ccaaatggag gagtcacgtg aagctataca tttacgatca
    20701 ctgcccttac tgcctcaaag cccgcatgat tttcggcctg aaaaatatcc ccgtcgaatt
    20761 acatgttctg ctcaacgacg acgcagaaac acccacccgg atggtcggtc aaaaacaggt
    20821 tcccattctg caaaaagatg acagccgcta tatgccagaa agcatggata tcgttcacta
    20881 tgtcgataaa ctcgacggca aaccgttact gaccggcaaa cgttcccctg ccattgaaga
    20941 gtggctgcgc aaggtcaatg gctacgccaa caaactgctg ttgccgcgtt ttgccaaatc
    21001 ggcatttgat gagttttcta ctcccgccgc gcgcaaatat ttcgtcgaca agaaagaggc
    21061 cagcgcgggt aattttgccg acctgctggc ccactctgac ggtctgatta agaatatcag
    21121 cgatgatttg cgtgcgctgg acaaactgat cgtcaaaccg aacgccgtga atggagaact
    21181 ttcggaagat gatattcagc tatttccgct actgcgtaat ctgacgctgg tagccggaat
    21241 caactggcca agccgcgttg ctgattaccg cgataatatg gcgaaacaga cacaaatcaa
    21301 tttgttatca tcaatggcga tttaatcctg acccgccgcg gcagcctgta ttcgcgggtt
    21361 gccgccgttt tcagtttttt ctgctggcga gtttatcgct ggtgacacat gctgcgttgt
    21421 gtcaggatat tgacgcagat ttcatgtcga ggactaccat gaacaagttt ttatttgccg
    21481 ctgcattgat cgtcagtggc ctgctcgttg gctgtaatca actcacccaa tacaccatca
    21541 ccgaacaaga aattaaccag tcgcttgcga aacataataa tttctcaaaa gatatcggtt
    21601 tacccggcgt ggctgacgcc catattgttc tgacaaactt gaccagccaa attggtcgcg
    21661 aagagccgaa taaggttacc ctaaccggag acgccaatct ggacatgaac tccctgttcg
    21721 gtagtcagaa agcgaccatg aaactgaagc tgaaagcgct gcccgtgttt gataaagaaa
    21781 aaggtgcgat cttcctgaaa gagatggaag tggtcgatgc gacggtacaa ccggaaaaaa
    21841 tgcaaacggt gatgcaaacg ttgcttccct atttgaacca ggcattacgc aattacttta
    21901 accagcaacc tgcttacgtc ctgcgcgaag atggcagtca gggcgaagca atggcgaaaa
    21961 aactggcgaa aggcattgaa gtgaagccag gcgaaattgt cattccgttt acggattaat
    22021 gacgagggcg cattcgcgcc ctttattttt cgtgcaaagg aaaacgtttc cgcttatcct
    22081 ttgtgtccgg caaaaacatc ccttcagccg gagcatagag attaatgact gcaccatccc
    22141 aggtattaaa gatccgccgc ccagacgact ggcaccttca cctccgcgat ggcgacatgt
    22201 taaaaactgt catgccgtat accagcgaaa tttatggacg ggctattgta atgcccaatc
    22261 tggctccgcc cgtgaccact gttgaggctg ccgtggcgta tcgccagcgt attcttgatg
    22321 ccgtacctgc cgggcacaat ttcaccccat tgatgacctg ttatttaaca gattcgctgg
    22381 atcctaatga gctggagcgc ggatttaacg aaggcgtgtt caccgctgca aaactttatc
    22441 cggcaaacgc aaccactaac tccagccacg gcgtgacgtc aattgacgca atcatgccgg
    22501 tacttgagcg catggaaaaa atcggtatgc cgctactggt gcatggtgaa gtgacacatg
    22561 cagatatcga catttttgat cgtgaagcgc actttataga aagcgtgatg gaacctctgc
    22621 gccagcgcct gactgcgctg aaagtcgttt ttgagcacat caccaccaaa gatgctgccg
    22681 actatgtccg tgacggaaat gaacggctgg ctgccaccat cactccgcag catctgatgt
    22741 ttaaccgcaa ccatatgctg gttggtggcg tgcgtccgca cctgtattgt ttacccatcc
    22801 tcaaacgcaa tattcaccaa caggcattgc gtgaactggt cgccagcggt tttaatcgag
    22861 tattcctcgg tacggattct gcgccacatg cacgtcatcg caaagagagc agttgcggct
    22921 gcgcgggctg cttcaacgcc ccaaccgcgc tgggcagtta cgctaccgtc tttgaagaga
    22981 tgaatgctct gcagcacttt gaagcattct gttctgtaaa cggcccgcag ttctatggct
    23041 tgccggtcaa cgacacattc atcgaactgg tacgtgaaga gcaacaggtt gctgaaagca
    23101 tcgcactgac tgatgacacc ctggtgccat tcctcgccgg ggaaacggta cgctggtccg
    23161 ttaaacaata aaaatcgtag cttcctgttg tcattaggtt attttacctg tataaataac
    23221 cagtatattc aacagggggc tattatgcga attgaagtca ccatagcgaa aacttctcca
    23281 ttgccagctg gggctattga cgccctggct ggcgaacttt cccgccgtat tcagtatgcg
    23341 tttcctgata atgaaggcca cgtatcggta cgttatgccg cagcgaataa tttatcggtt
    23401 attggcgtaa caaaagaaga taaacagcgc attagcgaaa ttctccagga aacgtgggaa
    23461 agcgccgatg actggtttgt cagcgaataa tatgcagtga tttttgtttt tgccgggtcg
    23521 ccccggcttt tttattttac ttacaaattt tgagtacaaa atttctacac ttcctcaaaa
    23581 taattgcaca atatgctaaa aaaatatgaa tgacatgctg ttttattgtt catataaatc
    23641 ttaaaagcag aaatttatct gttcccccct ttaaaaattc ggtgaatacc cttacttatt
    23701 ggtatactga agttgcttca gataaaaacg cattgaacct cgaataacgt tgtctagtaa
    23761 cacgaattag ggggccatga tggaaaaaaa taatgaagtc attcagactc atccgctcgt
    23821 agggtgggac atcagcaccg ttgatagcta tgatgcgctg atgttgcgtt tgcactacca
    23881 gaccccaaat aagtccgagc aggaagggac tgaagttggt cagacgctct ggttaaccac
    23941 tgatgttgcc agacaattta tttcgatatt agaagcagga atcgccaaaa ttgaatccgg
    24001 tgatttcccg gtaaacgagt atcggcgtca ttaacatgac atgaccatcc acccaaaagg
    24061 cacctcaccg gtgcctttac catttctggg ttgtatatct gcattcagtt aattactctg
    24121 cttaaaccat gagagcagag agaaaaaaat gaaatacgat ctcatcatta ttggcagcgg
    24181 ttccgtaggc gctgccgccg ggtattatgc aacccgcgcc ggtttaaacg tgctaatgac
    24241 cgacgcccat atgccaccgc atcaacacgg cagccaccac ggcgatacgc gattaattcg
    24301 ccatgcttat ggtgaaggcg aaaagtatgt cccgttggtc ctccgcgcgc aaacgctgtg
    24361 ggatgaactt tcccgccaca acgaagatga tcccattttt gtacgctctg gtgtcattaa
    24421 cctcggcccg gctgactccg catttctcgc caacgtcgcc cacagcgccg aacagtggca
    24481 actcaacgtt gaaaagctcg atgcgcaagg gattatggcc cgctggccag aaatacgcgt
    24541 cccggacaac tacatcggct tatttgagac tgattccggt tttttgcgca gcgaactggc
    24601 gattaaaacc tggatccaac tggcgaagga agcgggctgt gcgcaactgt tcaactgccc
    24661 ggtcaccgca attcgtcatg acgatgatgg cgtaactatt gaaaccgttg acggtgagta
    24721 tcaggcgaaa aaagcgattg tctgcgcggg aacatgggta aaagacctgc tcccggagct
    24781 gcctgtccag cctgtacgta aagtatttgc ctggtatcag gccgatggcc gctatagcgt
    24841 gaagaataaa ttcccggcgt ttaccggtga actgcccaat ggcgatcaat attatggttt
    24901 tccggcagaa aacgacgcgt tgaagattgg caaacataac ggaggccagg ttatccattc
    24961 agcggatgaa cgtgttccgt ttgcggaagt ggtcagcgat ggttcggaag ccttcccgtt
    25021 cttgcgcaat gtattgccgg gtatcggttg ctgcctgtac ggcgctgcct gcacctatga
    25081 taattcgcct gacgaagatt ttattatcga taccctaccc ggccacgata atacactgct
    25141 cattaccggc ctgagtgggc acggttttaa atttgcgtca gttttagggg aaatagctgc
    25201 cgattttgcg caagacaaaa aaagcgattt tgatttgacg ccattcaggc tttcccgctt
    25261 ccaataatca tcattacggc ctccagaatg aggccgtttt tacaggagta tttaatgcgt
    25321 cggctgttgc actatctcat caataatatt cgcgagcatc tgatgcttta tctttttctc
    25381 tggggattgt tggcaattat ggatctgatc tatgtgtttt atttttagtt ttccgcactg
    25441 acataaactg acaaatattt aatctccctt tcatttagcg tgaaaaattg aatgagatta
    25501 ttcctgcttc tacagcactc accagacatc tctgatgctg aacccactaa acttatgaag
    25561 attctttcat tattaattca aaattattga aataaaaata aatatcattc aatttgttat
    25621 ttttgtgttg caattcattc tccgacacgc cattttcttt ctctcgcaaa ttcgtattgg
    25681 atgcacttat gtcattcaca aatacccctg aacgctatgg tgttatatct gcggccttcc
    25741 attggctaag cgcaattatt gtctacggca tgtttacttt aggtctgtgg atggtcacgc
    25801 tcagttatta cgatggctgg tatcacaaag cacccgaact gcataaaagc atcggtattt
    25861 tgttaatgat ggggctggtt attcgcgttc tgtggcgtgt catatctcca ccgccgggtc
    25921 cgctgccgag ttattcgccc atgactcgtc ttgccgcaaa ggctggacat ctcgcattgt
    25981 acctattgct gttcgccatc ggcatcagcg gctatctgat ctcaactgcc gatggtaaac
    26041 cgatcagcgt ttttggctgg tttgacgtcc ccgcgaccct tgccgacgct ggcgcacagg
    26101 cagactttgc cggtgccctg catttttggc tcgcgtggag cgtcgtagta ctgtccgtta
    26161 tgcacggatt tatggccctg aagcatcatt tcatcgataa agacgacact ctgaagcgca
    26221 tgctgggaaa gtcgtcatct gactatggag tataaaaaat gaaaaaaagc ctgcttggtt
    26281 taaccttcgc gtccctgatg ttctctgccg gttcagcggt tgccgccgat tacaaaattg
    26341 acaaagaagg tcagcacgcc tttgttaatt tccgcatcca gcaccttggc tatagctggt
    26401 tatacggcac ctttgaagat ttcgacggta cttttacctt tgacgaaaaa aatccggctg
    26461 ccgataaagt gaatgtgaca attaacacca ccagcgtcga tactaatcac gccgaacgcg
    26521 ataaacatct tcgcagtgca gatttcctca ataccgcaaa atatccacag gcaacattca
    26581 cctccaccag cgtgaagaaa gacggtgacg aactggatat taccggcgat ctgacgctga
    26641 atggcgtaac caaacccgtc acgctggaag cgaaattaat tggtcagggc gacgacccat
    26701 ggggtggtaa acgtgcaggc ttcgaggccg aaggcaaaat taagctcaag gacttcaata
    26761 tcaagacaga tttaggtcca gcttctcagg aagtggatct gattatttca gtggaaggcg
    26821 tacagcagaa gtaagcgtga aatgttgccg gatggcacgc atccggcaat gatatttatt
    26881 ctgttggatc aggaatgccc agtgttgtat tcagacgtcc acgagactta ttaaagatct
    26941 tattgccatt ttcacgtcct gcccgacggc gtcgctgttc ttctggcggt aacgcgcttt
    27001 cttcgcagca aatctcacta caacaacctt tgtatttttc cgcgcatact ggacactgaa
    27061 taaacagcag gtggcagcca tcatttttac agttggtatg gctgtcgcac ggcgcgccgc
    27121 actggtggca atgcgcgata atctcatccg atatacgttc gcccatccgc tcgtcaaaaa
    27181 caaaattttt gccaataaaa cgcaccggca agccctgctc gcgcgcctta cgggcgtatt
    27241 caataattcc gccctcgata tgccagactt tgttgaatcc gttatgtttc atccaagcac
    27301 tggccttttc acaacgaatg ccgccggtgc agtacatgac gattttttta tctttatgtg
    27361 cctgcatcat ctcgactgct tttggcagct gctcacggaa ggtatctgcc ggaatttcga
    27421 gcgcgttttc aaagtgcccc acttcatact ca
//
LOCUS       DAJVUK010000041        27206 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.041, whole genome shotgun sequence.
ACCESSION   DAJVUK010000041 DAJVUK010000000
VERSION     DAJVUK010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27206
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.041"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(40..1338)
                     /gene="eno"
                     /locus_tag="OQQ57_001630"
     CDS             complement(40..1338)
                     /gene="eno"
                     /locus_tag="OQQ57_001630"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HCS1956431.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(1426..3063)
                     /gene="pyrG"
                     /locus_tag="OQQ57_001631"
     CDS             complement(1426..3063)
                     /gene="pyrG"
                     /locus_tag="OQQ57_001631"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HCS1956432.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            complement(3291..4082)
                     /gene="mazG"
                     /locus_tag="OQQ57_001632"
     CDS             complement(3291..4082)
                     /gene="mazG"
                     /locus_tag="OQQ57_001632"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HCS1956433.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            complement(4153..4488)
                     /gene="mazF"
                     /locus_tag="OQQ57_001633"
     CDS             complement(4153..4488)
                     /gene="mazF"
                     /locus_tag="OQQ57_001633"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HCS1956434.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKRIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            complement(4488..4736)
                     /gene="mazE"
                     /locus_tag="OQQ57_001634"
     CDS             complement(4488..4736)
                     /gene="mazE"
                     /locus_tag="OQQ57_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HCS1956435.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            complement(4814..7048)
                     /locus_tag="OQQ57_001635"
     CDS             complement(4814..7048)
                     /locus_tag="OQQ57_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HCS1956436.1"
                     /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            complement(7096..8397)
                     /gene="rlmD"
                     /locus_tag="OQQ57_001636"
     CDS             complement(7096..8397)
                     /gene="rlmD"
                     /locus_tag="OQQ57_001636"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HCS1956437.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
                     QCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     SALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            8454..11210
                     /gene="barA"
                     /locus_tag="OQQ57_001637"
     CDS             8454..11210
                     /gene="barA"
                     /locus_tag="OQQ57_001637"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HCS1956438.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            complement(11442..12782)
                     /gene="gudD"
                     /locus_tag="OQQ57_001638"
     CDS             complement(11442..12782)
                     /gene="gudD"
                     /locus_tag="OQQ57_001638"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HCS1956439.1"
                     /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIMIIK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKAT
                     PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAQRFPQARITLDPNGAWLLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
                     PEKPGLGVEIDMDQVMKAHELYQKHGLCARDNAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(12803..14143)
                     /locus_tag="OQQ57_001639"
     CDS             complement(12803..14143)
                     /locus_tag="OQQ57_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HCS1956440.1"
                     /translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELHVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
                     LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
                     WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
                     DAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
     gene            complement(14145..15515)
                     /gene="gudP"
                     /locus_tag="OQQ57_001640"
     CDS             complement(14145..15515)
                     /gene="gudP"
                     /locus_tag="OQQ57_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GudP"
                     /protein_id="HCS1956441.1"
                     /translation="MFRSATTSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRAT
                     LSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWS
                     MFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSI
                     FNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQ
                     KELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYF
                     FITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKT
                     PIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSG
                     GLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIEL
                     KPVAGQ"
     gene            complement(15932..16381)
                     /locus_tag="OQQ57_001641"
     CDS             complement(15932..16381)
                     /locus_tag="OQQ57_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HCS1956442.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
     gene            complement(16399..17181)
                     /gene="truC"
                     /locus_tag="OQQ57_001642"
     CDS             complement(16399..17181)
                     /gene="truC"
                     /locus_tag="OQQ57_001642"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HCS1956443.1"
                     /translation="MLEILYQDEWLVSVNKPSGWLVHRSWLDRDEKVVVMQTVRNQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            complement(17181..17510)
                     /locus_tag="OQQ57_001643"
     CDS             complement(17181..17510)
                     /locus_tag="OQQ57_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HCS1956444.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQHALILAELEKLDA
                     LFADDAS"
     gene            complement(18132..18677)
                     /gene="syd"
                     /locus_tag="OQQ57_001644"
     CDS             complement(18132..18677)
                     /gene="syd"
                     /locus_tag="OQQ57_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HCS1956445.1"
                     /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            18745..19593
                     /gene="queF"
                     /locus_tag="OQQ57_001645"
     CDS             18745..19593
                     /gene="queF"
                     /locus_tag="OQQ57_001645"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HCS1956446.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            19705..21069
                     /gene="ppnN"
                     /locus_tag="OQQ57_001646"
                     /gene_synonym="ygdH"
     CDS             19705..21069
                     /gene="ppnN"
                     /locus_tag="OQQ57_001646"
                     /gene_synonym="ygdH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HCS1956447.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
                     SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            21626..22915
                     /gene="sdaC"
                     /locus_tag="OQQ57_001647"
     CDS             21626..22915
                     /gene="sdaC"
                     /locus_tag="OQQ57_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease SdaC"
                     /protein_id="HCS1956448.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            22973..24340
                     /gene="sdaB"
                     /locus_tag="OQQ57_001648"
     CDS             22973..24340
                     /gene="sdaB"
                     /locus_tag="OQQ57_001648"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HCS1956449.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            24452..25207
                     /gene="xni"
                     /locus_tag="OQQ57_001649"
     CDS             24452..25207
                     /gene="xni"
                     /locus_tag="OQQ57_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HCS1956450.1"
                     /translation="MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH
                     AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNE
                     ADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV
                     QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL
                     ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR"
     gene            complement(25312..26449)
                     /gene="fucO"
                     /locus_tag="OQQ57_001650"
                     /pseudo
     CDS             complement(25312..26449)
                     /gene="fucO"
                     /locus_tag="OQQ57_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
     gene            complement(26477..27124)
                     /gene="fucA"
                     /locus_tag="OQQ57_001651"
     CDS             complement(26477..27124)
                     /gene="fucA"
                     /locus_tag="OQQ57_001651"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HCS1956451.1"
                     /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
                     IPYEKLTESHIAFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
                     ILNRPIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC
                     EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
BASE COUNT         6581 a         7297 c         6553 g         6775 t
ORIGIN      
        1 tcccggaggc tggcattttt aaatcagata aagtcagtct tatgcctggc ctttgatctc
       61 tttacgaccg ttgtacggtg ctttttcgcc cagagcttct tcgatacgaa tcagctggtt
      121 gtatttagca acacggtcag aacggctcat agaaccagtt ttgatctggc ctgcagcagt
      181 accaacagcc aggtcagcga tggtagcgtc ttcagtttcg ccagaacggt gagagataac
      241 tgcagtgtag ccagcatctt tcgccatctt gattgcagcc agagtttcgg tcagagaacc
      301 gatctggttg aatttgatca ggatggagtt agcgatacct ttttcgatac cttctttcag
      361 gatcttggtg ttggttacga acaggtcgtc accaaccagc tggattttgt cgcccagaac
      421 tttggtctgg tatgcgaaac cgtcccagtc agattcgtcc agaccgtctt cgatagaaac
      481 gatcgggtac tgtttggtca gttcttccag gaagtgagtg aattcttcag aggtgaacgc
      541 tttgttgcct tcgccagcca gaacgtattt accatctttg tagaattcag aagctgcgca
      601 gtccatcgcc agagtgatgt ctttgcccag ttcataacca gcagctttaa cagcttcagc
      661 gataacagcc agagcttcag cgttggaacc caggttcggc gcatagccac cttcgtcacc
      721 aacagcagta ttcatgcctt tcgctttcag aacttttgcc aggtgatgga aaacttcaga
      781 acccatgcgg atggcttctt tcacagtttt cgcgccaacc ggctgaatca tgaattcctg
      841 gatatcaacg ttgttgtcag cgtgctcacc accgttgatg atgttcatca tcggaaccgg
      901 catagagtat ttgcccggag taccgttcag ttcagcgatg tgctcgtaca gcggcatacc
      961 tttagcagct gcagcagctt tggcgttagc cagagataca gccaggattg cgttcgcgcc
     1021 gaatttggat ttgttttcgg tgccgtccag gtcgatcatg atcttgtcaa tgccagcctg
     1081 atctttagca tctttgccaa tcagcgcctg agcgatcggg ccgtttaccg cagcaacagc
     1141 tttggttacg cctttaccca ggaaacggga tttgtcgcca tcgcgcagtt ccagagcttc
     1201 acgggaacca gtagaagcac ctgacggagc agctgccata ccgacgaaac caccctccag
     1261 atgtacttcg gcttcaacag tcgggttacc acgggagtcg atgatttcac gaccgatgat
     1321 ttttacgatt ttggacatta ggttttcctc aagtcactag ttaaactgaa actccagaca
     1381 aacaacacgt acccagggta cgcgttgccg ttctaacttt tttacttact tcgcctgacg
     1441 tttctggaac tcgctggcgg ctttcacaaa gcctgcaaac agcgggtgac catcacgtgg
     1501 agtagaagta aactccggat ggaactggca agccacgaac cacgggtgat tcggaacttc
     1561 gatgatctcg accaactgat catccccgga acggcccgca acgcgcagac ctgcatcttc
     1621 aatctgtttc aacagcatgt tgttgacttc gtaacggtga cgatgacgct caacaattgt
     1681 cggcgcattg tacagctggc gaaccaggct atcgtcaacc aactggcact gctgtgcgcc
     1741 gagacgcatg gtaccgccga gatcgctctt ctcgctacga acttcaacgt tgccgttttc
     1801 atcgcgccac tcggtaatca gcgccacaac cgggtactta cagtctggca caaattccgt
     1861 agagttggcg ttctccatgt tggcaacatg gcgagcgtaa tcaattaacg ccacctgcat
     1921 acccaggcaa atgcccagat aaggaatatt gttctcacgc gcaaaacgcg cggtcgtaat
     1981 catgccttct acgccacgat agccgaaacc gccaggtacg aggattgcgt ccagaccttt
     2041 aaggatttca acgccgcgcg tttcaacatc ttgtgaatcg atcagtttga tgttgacgct
     2101 gacacgattc ttcagcccac cgtgtttcag tgcttcgatc actgatttat aagcatccgg
     2161 cagttcaatg tacttgccga ccataccgat ggtgacttca cttaccgggt tcgcttcttc
     2221 gaagataacc tgttcccatt cggacagatt cgcttccggg cagtttaagc tgaatcgttt
     2281 acaaatataa tcgtccagcc cctgagattt caacaggccc ggaattttat agatggaatc
     2341 gacgtctttc agagaaataa ccgctttttc cggaacatta cagaacaatg caatcttcgc
     2401 acgttcgttc gccggaacag cgcgatctga acgacaaatc aggatgtcag gctggatacc
     2461 gatggagagc agctctttta cagagtgctg agtcggtttg gttttgactt caccagacgc
     2521 tgccatgtac ggcaccagcg tcaggtgcat aaacagagtg tgctcacggc caatttcaac
     2581 agccatctgg cgaatcgctt cgaggaacgg caaggattcg atatcaccta ctgtaccgcc
     2641 gatttctacc agtactacgt catgaccttc gccaccttcc agcacgcgct ctttgattgc
     2701 gttagtgatg tgcggaataa cctgcacggt tgcgccgagg tagtcaccgc ggcgttcttt
     2761 acgcagaacg tcagagtaga tacgacccgt ggtgaagttg ttgcggcggc tcattttggt
     2821 acgaatgaaa cgctcgtagt gccccaggtc caggtcggtt tcagcgccgt cttcagtaac
     2881 gaacacttcc ccgtgttgga ttgggctcat agtacctgga tcgacgttga tgtacggatc
     2941 cagtttcatg atggtcacat tgaggccacg ggcttcaaga atggctgcga gggaggctgc
     3001 ggcaatgcct ttacccagag aggatacgac cccgccggtc acaaaaatat agttcgttgt
     3061 catgctgaac ctgagaagtt aggttgaaaa gacgatggaa taaccaggac gggaaagcag
     3121 tatacccgaa catgacctgt gccacaaact ttcattatcc ctcctcttcg ccagcgcact
     3181 attgaaatca ggagtgagaa aatagcccct ttggggtaaa tgtttttgac gcaaatcaag
     3241 cgcttgtcat ttaaaaaatg acacaaatgg cacttgaccg cgtaattccc ttagagatca
     3301 atttcctgcc gttttacctg ttgccagact tcttccattg tttcgaggtc aacacctgtc
     3361 atttccagtc cacgcgcggc aacaatacgc tccacttcgc gaaaacgacg ctcgaatttt
     3421 tcgttcgctt tttgcaatgc gatttctgct ttcgtcccta aatggcgagc cagattaacc
     3481 gtggcaaaca gcaggtcccc catttcctcc tccagtttag cctggtcgac aacagcctgc
     3541 cgcgcttcgt acatcacctc gtcgatctct tcgtagactt tatcaaccac cgggccaagc
     3601 gtcgtccagt cgaagccaac gttggcgcaa cgtttctgga ttttttgcgc ccgcattaaa
     3661 gccggtaaac tacgaggaat atcgtccagc gccgaatgct gcgctttctg cgcgcgctct
     3721 tcggttttga tttgctccca acgggcaagc acttcactac tgttttcggc agaactatca
     3781 gcaaaaacat gcggatggcg acgctctaat ttatcgctaa tagcagcgca aatatcatta
     3841 aagtcaaagc gcccttcttc ctgagccatt tgcgcgtaaa acaccacctg gaatagcaga
     3901 tcgcccagtt caccgcgaag atcgtcaaaa tcttcacggg cgatggcgtc cagcacttcg
     3961 taggtttctt caagggtgta aggcgcaatg gtggcaaatg tctgctcttt atcccacggg
     4021 cagccgtttt ccggatcgcg caggcgctgc ataatagtga gcaaacgatc gatttgattc
     4081 attgaattgt cctgaaaatt gcgggtctgt caggtggaaa cctgtgacca gaatagaagt
     4141 gagttagtaa cactacccaa tcagtacgtt aattttggct ttaatgagtt gtaattcctc
     4201 tggggcaact gttcctttct tcgttgctcc tcttgcccgc caggcgattc tttttacctg
     4261 atcagctaac gctacgccat cacgttcctg accggataaa acaacttcga acggatatcc
     4321 ttttgattgc gttgtacaag gaacacacag acacatacct gttttgttgt tgtacatgaa
     4381 aggactcagg acaacagctg gacgatgtcc agcttgctcg ctaccttttg tcgggtcaaa
     4441 atcaacccaa atcagatcgc ccatatcggg tacgtatcgg cttaccatta ccagacttcc
     4501 ttatctttcg gctctcccca gtcgatattc tcgtggaggt tttccggcgt gatgtcgttg
     4561 accagttcag caagcgtaaa tacgggctct ttacgcactg gctcaataat taatttgcca
     4621 tccaccaggt caatcttcac ttcatcatca atattcagat tgagcgcctg cattaacgta
     4681 gccgggatcc gcaccgccgg tgaatttccc caacgcttta cgctactgtg gatcatcacc
     4741 ctttcctcaa accgctatca tatgtagata cagtatatat caatctacat tgtagatacg
     4801 agcaaatttc tgcctaactc ccgtgcaacc gacgcgcgtc gataacatcc ggcacctggt
     4861 tgagtttacc cagcacgcgg cccagcacct gcaggttgta aatctcaatg gtcatgtcga
     4921 tggtcgccag ttgctgtttg gtgtcgctac ggctggcaac gccaagtacg ttcaccttct
     4981 cgttggcgag aatggtcgtg atatcacgta acaacccact acgatcatta gccaccacgc
     5041 ggaccaccag cgaatatccg gcggagtagc tctcacccca taccgcgtca acaatgcgtt
     5101 ctggcgcatg agagcgcagt tccgccagtt gttcgcaatc ggcgcggtgt actgaaatac
     5161 cgcgcccctg ggtaatgaag ccgacaatct catctccagg aatcggctgg cagcagcgcg
     5221 cgatgtggtg catcaggttg ccaacacctt cgactaccac gcgaccgtta tctttactgc
     5281 ggttttgcgg cgtgtagctt ttttgctgaa gttgcttcag cgcggcggcg tcctgctctt
     5341 cggcactcgg cttattaaat tgcgattgca ggaagttcac catctgattg agacggatat
     5401 ccccgccacc aatcgccgcc agcaactcgt cgacatcatt aaagttgtaa cgcggcagca
     5461 gatgtttttc tgcttctttc aggctgatcc ccagatgttc cagctcgtcg tcaaggattt
     5521 gccgcccagc cagaatgttt ttgtcacggt cctgtttacg gaaccaggcg tgaattttcg
     5581 aacgcccacg gctggttgtg acgtaaccga ggtttgggtt taaccagtca cggctggggt
     5641 tcggctgttt ctgggtgata atttcaatct ggtcgcccat ctgcagctgg taggtgaacg
     5701 gcacaatgcg cccgccaatt tttgccccga tgcagcggtg tccgacatca ctgtggatgt
     5761 ggtaagcgaa gtccagcggc gttgatcccg caggcaaatc aacgacatca cctttcggcg
     5821 taaagacata cacccggtcg tcaaagacct ggctgcgtac ttcgtcgagc atttcgccgg
     5881 aatcagccat ctcttcctgc cacgcaatca gtttacgcag ccaggcaatc cggtcttcat
     5941 gtcccgaacg tgcgccgcca gctgccgcgc cctctttata tttccagtgc gcagcaacac
     6001 ccaactctgc atcttcatgc atctgtttgg tgcggatttg gatctcaacg gttttgccac
     6061 ctggccccag aaccacggta tgaatagact gataaccgtt tggtttcggg ttagcgacat
     6121 aatcgtcaaa ctcatccggc aggtggcgat agtgagtgtg cactatcccc agtgcggcat
     6181 aacaatcctg taaacgctcg gcgacaatac gtaccgcacg cacatcaaac agctcatcga
     6241 aggcgaggtt ctttttctgc attttgcgcc agatgctgta gatgtgtttc ggacggccat
     6301 acacttcagc tttaacgcct tcagctttca tctcagcgcg cagatgaccg acaaactctt
     6361 cgatatagtg ttcgcggtcg agacggcgtt catgcagcag ttttgcgatg cgtttgtatt
     6421 cggtcgggtg cagataacgg aagcagtaat cttccagctc ccatttcagt tgcccaatcc
     6481 caagacggtt cgccaacggc gcgtagatat tggtgcactc ttttgccgcc agtacgcgtt
     6541 catcttccgg cgcatctttt acttcgcgca gatgagcaat acgctccgcc agtttgatga
     6601 ccacgcagcg aaaatcatcg accatcgcca ataacatccg gcgaacgtta tcgacctgtt
     6661 cggaggaaac agaatcagtg tgcgtcgctt tcagctggcg gatcgccgcc atatcacgca
     6721 cgccgtgaat aaggttaacg acagacttac cgacgctctc acgcagcaca tcttcgctga
     6781 ctacgttggc atcggccaga gggaacagca gcgccgcccg cagcgtgtca atgtccatac
     6841 ttaatgtcga gaggatctcc accatctcaa caccacgcca caataacaga ctggcatccg
     6901 gatgcccctg cgtctgctgc agacaatacg cccaggtttc ggctaagcac tcacacgact
     6961 tctggctggt aatacccaga cttgcgatcc atttttccgg atcaaattca ccagccttat
     7021 tgatatgtgc acttcttacc gcaaccattg tcctctcctt tagggaccag acctgccgaa
     7081 atcggcaaat cgtaactatt taacgcgcga gaaaagtacc atcgattcca gatgtcccgt
     7141 gtgtgggaac atatccagca tcgccagtcg cgcaatggta tatcctgctt ttaataacgc
     7201 ttcgctatcc cgagccagcg ttgcagggtt acaggataca taaactatac gaataggttc
     7261 cagttttata atttgctgca taacacctgc ggcacctgct cgcgccgggt ccagcaacac
     7321 tttatcgaag ccgtttttcg cccacggctg ctttgtgaca tcttcttcaa gattttcgtg
     7381 ataaaacgtc acattctgta agccattaag acgcgcattc tgctggcctt tttccaccag
     7441 cgccggaaca ccttctacac cgaccacact ggcagcttgt gtcgccaatg gcagtgtaaa
     7501 gttgcccata ccgcagaaca gatccagtac gcgatcttca ggttgcacat ccagccattc
     7561 caacgcactc gctaccattt tttggttcac acccgcattg acctgaataa aatcgcgcgg
     7621 gctaaaagtt aagcgcaacc cgttagagtc ataccagggc atctcaccag agacggtttc
     7681 gagtatctca ctatcggggg cgagatacag atccaggcct tcagaatgcg aaaagcgttc
     7741 cagtttttcg cgatctgccg aacttagcgg tgcggtatgg cgcaaaatca tcagcgtgcc
     7801 gctggttgcc tgtaccagtt caacatgacc aagatggcgc attgcttgta agctgcccag
     7861 gcatgccctg actttgggca gcaatgcttc aagttggggc actaaaatgg gacattgttt
     7921 aacgtcgaca atgtcactgg agcccgcttt gcgaaacccc atctgaagtt gctgtgtttt
     7981 cggtaagtag ttcagactta aacgcgcgcg acggcgatag ccccagggaa catcggcgat
     8041 cacttcagag acttcgtgtt tcattaatcg ggcgagtgcc gcacttttgc ttcgctgctg
     8101 taaatccacg ctggcgtgtt gttgctgaca gccgccgcat acgccaaaat gaggacagcg
     8161 tggcgtttcg cgttccgggc tatcgcttaa ccggcgtacg actttagcgc gggcatactg
     8221 ttttttatct tcagtaacag taacttccgc gttttcctgc ggcaataatc cggggataaa
     8281 tagcgttttg ccgttatgtc gcgccacgcc ctgaccaaaa gagtcgaggt cgttgactga
     8341 aacggttatg atctgacgcg tcgtcgtgcg tcgttttgca gagtagaatt gcgccattgg
     8401 cgagactttc tcaatttaac agtgtgacct taattgtcac ataacggaac tccatgacca
     8461 actacagcct gcgcgcacgc atgatgattc tgatcctggc accgaccgtc cttattggtt
     8521 tattgctgag tatatttttc gtcgtgcatc gctataacga cttgcagcgt caactggaag
     8581 atgcaggtgc cagcattatt gagccgcttg cagtttctac tgaatatggc atgagcctgc
     8641 aaaatcgcga atctatcggt cagttaataa gcgtactgca tcgtcgccat tccgatattg
     8701 ttcgcgcgat ttcggtttat gatgaaaata accgactctt tgtcacctcc aattttcatc
     8761 ttgatccctc atcaatgcag ctcggcagca acgtgccgtt tcctcgccag ctcactgtca
     8821 ctcgtgacgg cgatattatg atcctccgca cgccgattat ttctgagagt tactcccccg
     8881 acgaatcgcc cagtagcgat gccaaaaata gtcaaaatat gttgggatat attgcgcttg
     8941 agctggatct taaatcggtt cgcttgcagc aatataaaga gatctttatt tccagcgtga
     9001 tgatgctgtt ttgtatcggt attgcgctta tttttggctg gcgcttaatg cgcgatgtaa
     9061 ccggtccgat tcgcaacatg gtgaataccg tcgaccgcat ccgtcgcggg caactcgaca
     9121 gccgggtgga aggatttatg ctcggcgagc tggatatgct gaaaaacggt atcaactcga
     9181 tggcaatgtc gctggctgct tatcacgaag agatgcagca caatatcgac caggcgacgt
     9241 ccgatctgcg tgaaacgctg gagcagatgg aaattcagaa cgttgagttg gatctggcga
     9301 aaaagcgcgc ccaggaagcg gcgcgtatta aatccgagtt tctggcaaat atgtcacacg
     9361 agctgcgtac accactgaat ggtgttattg gctttacccg cctgacgctg aaaacagaat
     9421 taacaccaac gcagcgcgat cacctgaata cgattgaacg ttcggcaaat aatttgctgg
     9481 caattattaa tgatgttctc gacttctcga aactggaagc aggtaagctg attctggaaa
     9541 gtattccatt cccactacgc agcacgctgg atgaagtcgt tactctgctg gcacattctt
     9601 ctcacgataa agggttggaa ctgacgctca atattaaaag cgacgtgcct gataacgtga
     9661 tcggcgaccc actgcgatta cagcaaatca tcactaacct ggtggggaat gcaattaaat
     9721 tcaccgagaa tggcaacatt gatattctgg tagaaaaacg tgcgctgagt aataccaaag
     9781 tgcagattga agtgcagatt cgggataccg gcattggtat tcctgaacgc gatcaatcgc
     9841 gcttattcca ggccttccga caggctgatg ccagtatttc ccgccgtcat ggtggcaccg
     9901 ggctggggct ggtgattaca caaaaactgg ttaatgaaat gggcggcgat atttcgttcc
     9961 atagccagcc gaatcgcggt tcaactttct ggttccacat taatctcgat ctgaacccga
    10021 acattattat cgaagggcca tccacccagt gcctcgcagg taagcgcctg gcctatgtcg
    10081 aaccaaactc cgcagcagcg caatgcacgc tggatatttt aagtgaaacg ccgctggaag
    10141 tggtttatag cccaacgttc tccgcgctgc ctcccgcgca ttacgacatg atgttgttag
    10201 gcatcgcggt gaccttccgc gagccgctaa caatgcaaca tgagcgatta gcgaaagcgg
    10261 tatcgatgac cgatttcctg atgctggcac ttccttgcca tgcacaagtc aatgctgaaa
    10321 aactcaagca agatggtatc ggcgcgtgtc tgctgaaacc attaacacct acacgcctgt
    10381 tgcctgccct gacggaattt tgtcatcaca aacaaaacac gcttttgcct gtaaccgatg
    10441 aaagtaagct ggcaatgaca gtcatggcgg ttgatgacaa ccccgctaac ctgaaactta
    10501 tcggcgcatt gctggaagat atggtgcaac atgtggaact ttgcgatagc gggcatcagg
    10561 cggttgaacg ggcgaaacag atgccgttcg atttgatctt aatggatatt caaatgccgg
    10621 acatggatgg cattcgggcc tgcgaactca tccaccagct cccccatcag caacaaacgc
    10681 cggttatcgc ggtaacggcg catgcaatgg ccgggcaaaa agagaagctg cttggcgcag
    10741 ggatgagcga ttatctggcg aaaccgattg aagaagagcg attgcataat ttgttgttgc
    10801 gctacaagcc tggcagcggt atttcctctc gcgtcgtgac gcccgaagtc aacgaaattg
    10861 tggtgaaccc gaatgcgacc ctcgactggc aactggcact acgccaggca gcaggaaaaa
    10921 ccgatttagc gcgcgatatg ctgcaaatgt tactcgattt cctgcctgaa gttcgcaaca
    10981 aagttgagga acagctggtt ggagaaaacc cggaaggcct ggttgatttg attcataaac
    11041 tgcatggcag ttgcggctat agcggtgtgc cgcgtatgaa gaatctctgc caactgatcg
    11101 aacaacagct acgtagcggt actaaagaag aagatttgga gccggagctg ctggaactgt
    11161 tggacgagat ggataatgtc gcgcgcgaag ccagcaaaat tctcgggtaa cggacgtctt
    11221 gtcgagtagc aatcggcttt ttatgacgct ggtttcagat tggtgacaaa gtgcctgtgt
    11281 ttatgccgga tgcggcgtta acgccttatc cggcctacaa aaccaattaa attcaatgaa
    11341 ttaaaaaatg atgtagacct gatacatagc acaacaggct attttgcgtt tagcatcagt
    11401 ctcaagccgg ctccagatag agccggtttt ggttttctgt cttaacgcac catgcacggg
    11461 cgcttgttat cgaacgtcca gccaggaatc agatactgca ttcccatcgc attgtcacgc
    11521 gcgcaaagcc cgtgtttctg atacagctca tgggctttca tcacttgatc catatcgatt
    11581 tctacaccca gccccggttt ttccggcacc tgaaccagac cgcctttgat ctcaaacggt
    11641 tctttggtca agcgctgatt gccttcctgc caaatccagt gcgtatcaat cgcggtgatt
    11701 ttacccggtg cagcggcggc aacatgggta aacatcgcca gggaaatatc gaagtggttg
    11761 tttgagtgtg aaccccaggt caggccaaat tcatggcaca tttgcgccac acgtaccgaa
    11821 ccttgcatcg tccagaaatg cggatccgcc agcgggatat caacggattg cagggagagc
    11881 gtatggccca tctgccgcca gtcggtggcg atcatattgg ttgcggtcgg caggccagtt
    11941 gcgcgacgga actctgccat cacttcacgc ccggagaaac cttgctccgc accacacgga
    12001 tcttctgcat aagccagcga ccctttcagg tatttaccaa ttttaatcgc ttcgttcagc
    12061 aaccaggcac cgttaggatc gagcgtaata cgcgcctgcg ggaagcgttg cgccagtgcc
    12121 acaatagact cggcctcttc ttccccggcc agtacaccgc ctttcagttt gaaatcgttg
    12181 aagccatatt tttcatacgc cgcttccgcc aggcgcacca ccgcatccgg cgtcatcgct
    12241 tcttcatgac gcaggcgata ccagtcgcat gagtcatccg gctggctttg atacggcagc
    12301 ggtgtggctt tgcgatcacc gacgaagaac agataaccga gcatttcgac ttcgctacgc
    12361 tgttgaccat cgcccagcag ggatgccacg tttaccccca gatgctgccc cagcagatcc
    12421 agcattgccg cttctatccc ggtaactaca tgaatagtgg tacgcaaatc aaatgtctgc
    12481 aaaccgcgcc caccagcatc acgatcggca aaagtattac gcaccagcgt cagaacgttt
    12541 ttgtattcac ccagcgtttt acctaccacc agcggaatcg catcttccag cgttttacgg
    12601 attttctcgc cgccgggaat ttcccctacg ccagtgtgac cagaattatc tttgataatc
    12661 ataatattac gcgtaaagaa cggtgcgtgt gcaccactca gattcatcag catactgtca
    12721 tgacccgcca ccgggatgac ctgcatttca gtaacaacag gcgtcgtaaa ttgagaactc
    12781 atatttatgt cctttttcag aatcaatgac ggccgaaaac gggacgttta cggtcaaagg
    12841 tccagccggg gatcaggtac tgcatcggac ctgcgtcgtt acgcgcaccg ccaggcagac
    12901 gtttataggc ctcatgtgcc ttttgtacct gttcccagtc cagttccacg cccagaccgg
    12961 gcgcatcagg aacggcaatt tttccgtttt taatctccag cggatttttg gtcaggcgac
    13021 aatcgccctc ctgccaaatc cagtgggtat cgatagcggt aggattaccc ggtgccgccg
    13081 cgcccacatg ggtaaacatc gccagagaga tatcgaaatg gttattagaa tggcagcccc
    13141 aggtcagccc ccagtcgtcg caaagctgcg ccacacggac tgcaccggaa agcgtccaga
    13201 agtgcggatc ggcaagtgga atatctaccg cattgagcat caccgcatga cccatttcgc
    13261 gccagttggt ggcgatcatg ttagtcgcga cgggcaagcc ggtcgcccgc cgaaactccg
    13321 ccataacttc acgaccggag aaaccctgtt ctgcgccgca tggatcttcg gcataggtaa
    13381 gaacatcatt cagccctttg catagagaaa tggcttcatc aagtagccag gcaccgttgg
    13441 gatcaacggt aatccgcgca tcagggaagc gtttcttcaa tgcacgaaca gtgtcgattt
    13501 cttgctcgcc aggtaacacc ccgcccttaa gtttgaaatc tttaaagcca tagcgatcct
    13561 gtgaggcttc cgccagacgc acaacggctt cgctgttcat cgctttctga tggcgcaact
    13621 gataccactc atggttgccc ggcgtatttt ccagataagg aagatcggtt ttggtccgat
    13681 caccgatata aaacagataa ccgaggacgg taatagtctc gcgttgcttg cctggcccca
    13741 acagttcgca gaccggaaca ttcagcgcct tacctagcag gtcaagcaag gcggcttcca
    13801 gcgccgccac ggcattaacg tgcaattcaa aagtccaggc acctttgccg aaggtatcaa
    13861 aatcggctgc ctgattacct ttatgcacct gctgaaccac tttattcagg cgcgcaactt
    13921 cctggcccag aaccatcgga atagcatcga ccagtgtttg ataaatcacc tctccgcccg
    13981 gcgcttcacc aatgccggta tgcccggcgt tatcggtgag taccacaata ttgcgggtga
    14041 aatatgcgtt atgtgcccca ccaatattaa gcaacatgct atcgtgcccg gcgaccggaa
    14101 tgactttcat atcagtaata acaggactgg attgtgtcgt catcttattg ccccgcgaca
    14161 ggtttcagct cgatacgctt gatatcgccc accagcacca ggtagctcag taccgcgatt
    14221 aaggcatgaa caccaacata aatcagcgcc ccattaaagg agccagtcgt gccaacgata
    14281 taaccaattg cgattggcgt gacgatgcca gaaatgttac cgaacatgtt gaacaggcca
    14341 ccggaaagac cgctgatctc ttttggcgcg gtatctgcca ttactgccca acccagcgcc
    14401 ccgatgccct taccgaagaa ggccagcgcc ataaagccga tgatcatcca ctcaacgttg
    14461 acgtagttgc agaacaccat caccatcgac agcaacatgc ccattacgat cggtgtttta
    14521 cgcgcaatgt tcagcgatcc cgtgcggcgc atcagccagt cggaaataat cccacccagc
    14581 acaccgccga taaaaccgca aaccgccgga acggaagcca caaagcccgc tttcagaatt
    14641 gacatcccac gcgcctgcac cagataaacc ggaaaccagg taatgaaaaa gtaagtcagg
    14701 gcgttgatac agtactgacc gatataaacg ccgatcatca tccgtgaccc gagcagttgt
    14761 ttgatctgcc cccacttcac gctgaacggc actttaactt tggtgttttg ctgatccata
    14821 ttgatcagcg cgccacccgc ggcgatgtac tccagctctt tctgatttac ccccggatgt
    14881 tgatttggct cgtggatgac tttcaaccag ataaagctga tgacaatccc cagaccgccc
    14941 ataaagaaga agacgtgtga ccagcccact tcatgcgtca gccagcccat aatcggcgcg
    15001 aagatcaccg ttgcgaagta ttgagcggag ttaaaaatcg acaccgccgt tcccctttcc
    15061 tgcgccggaa accaagccgc aacaatgcga ctgttgccgg ggaaagatgg cgcttcagca
    15121 agcccgacca ggaagcgcag agtaaacagg gcaacgataa tgccgaatcc actaaagata
    15181 tcgacgaagc cttgcagcaa ggtaaacatc gaccagataa agatcgacca gaagtagacg
    15241 cgttttgaac caaaacgatc cagcaaccaa ccaccaggga tctgcccgat aacataagcc
    15301 catgagaagg cagagaacac atagcccatt cccacgggat caaggccgat atctttggcc
    15361 atttccgaac cggcaataga aagcgtagcg cggtcgccgt agttgaagga tgtgacgata
    15421 aacaacatca ccactatcca gtaacgagca ttcgtgcgtt tttccacact gctcgcagcc
    15481 tgacttaaag aactcgttgt tgcactcctg aaaattcgcg ttagccacgc taactctgga
    15541 ctgcgacata gccaggaaat cagaggtgac gtagggtgtt ttttgccgtt tttataggtc
    15601 gttcgccgaa tacggcgcgt gtttatatct ggcaatagca gtataaaaag cgcgccatag
    15661 cggctcaccg tgcaacaaca caacattaat gcgttcaatg aggcccgatt ttggcattag
    15721 ccctggacgg tggaatccac ttcacggaaa tgaaaacaag aacaagaaag gaagggttaa
    15781 aacgaagaaa taaagaagag tatgaaatgg atcgcttgac tccaggcaaa cgccagtaaa
    15841 aatccgcgct atgaagcagt ttttactggc atttgcctga aaagattcga ttcagcaccg
    15901 ctaaaacgac atttaccgct cgctgaacat atcaggacaa cagcgtgccc cactgttcga
    15961 cccacggatt tgattccgtt tccggttccg ggttctcact ggcgtcaatc aacagcattt
    16021 cgccaactcg ctgagcgctc tgttcctgca acaaggcatc gaactgtttg ccgccattgc
    16081 agaaatttac ataactgctg tcgccgagcg caatcacgcc ataacgcaga ttcggctgga
    16141 agcccagact atctttgatt ccctgaaaga gcggcacaat gctatcagga aggtcgccct
    16201 gcccggtcgt ggacgtaacc accagaacat acttatcctg ataaggcagc cagtcgctta
    16261 attcaggatc ttcaaatacc gttgctttgt ggccctgtgc ggtcagaatt gcttctgctt
    16321 cttccgccac taacagcgaa tttccgtaca tggtgccgac aaaaatacca atttccgcca
    16381 taccgttttc tccctggatt aggaacttat ctctccatcc tgacccgatg gcgcactgaa
    16441 ctcaaccctt tcattttcag gaagcagacc gcgccagcca aattgtgata acgcctgcat
    16501 ccaggtgtcg tccaggcccg cgtgaatagt cagcggctcg ccagtaaaag gatgcgtcaa
    16561 tgacaactga ctggcatgta gcattaaccg ctggaggcca aaatgctcag caccgctgcg
    16621 attctggcgt aaatcgccat gtttgctatc gccaataatc ggatgacgca aatgggcaag
    16681 atgtcggcga agctgatgtt tgcgtccggt tttcggctcc agttccacca ggccgtagcg
    16741 cgtggtcggg taacgtccgg tcgctaccgg catttctacg gtcgccagac cgcgataatg
    16801 cgtcactgct ggctgcgggc ctttatcttc gcgggcaaat ttatcagcga ttttgtccag
    16861 ttcttccacc agtggataat ccagcaccgc ttcttccatc aaccagccgc gcacaatcgc
    16921 atggtaacgt ttctggattt ggtgctgttc aaactgttgt gccagcagcc gtccggcctc
    16981 gctggataat cccatcaaca acacaccaga agtgggtcgg tccagacgat gagcagtaaa
    17041 aacatgctgt cctatctggt tacgcacggt ttgcatgacc actactttct cgtcgcgatc
    17101 cagccagcta cggtgaacca gccagccgga gggtttattt accgaaacca gccattcatc
    17161 ctgatagagt atttccagca ttagctcgca tcatccgcaa aaagagcatc cagtttttcc
    17221 aactcagcca gaataagcgc gtgttgcgga tggtccgtcg ccagcgccat ttcataatag
    17281 ggtgcaacag caaaagcgcc cggtaacggc tggttgttat ttaacaaatc gtgcattcgc
    17341 gggatcagca cccactgcaa ccactccagt ggttccatgg tgtccataaa gaacggttgg
    17401 gtactattaa attgatgcgg ctggggttca tcgtttcgcc agtgctgatg ttcacgcagt
    17461 aacgcttcaa gcgcctgcaa ctggagacga acgcggtcat gagtggtcat aaagcaacct
    17521 caataagaaa aactgccgcg aaggatagca ggaataaaaa aagggagcac tgtattcaca
    17581 gcgctcccgg ttcgtttcgc agcattccag ctacttttgt tgctccctgc tcatccttga
    17641 caacttttcc tctggccttg cggccaatcg ttcatcctga actattgctt cctgctcaca
    17701 ccaccccgat gtgatacttc atcctgaagt gtccttggcc ttcctgacca gccgaatcat
    17761 cctgaccggt tctcattctc catcctggag gtgtccttta acgcgtcctg cgtcatcctc
    17821 ttcgcttcat ccagaagcct ttccctgaaa caccatcctg gtgtgtcctg cagaagtgtc
    17881 atcatcctga tgttcacttc gttgtctgac tccctgtcga cgaagataga atcgtctttt
    17941 tcgcgaagtc ttacaaggcg cttacagaca atgccttaag gaaaatttca tatgaaagtt
    18001 aagaattaac aatcaacatt ttgattttaa atgaaaataa cgattcttat ctttttaagt
    18061 attcgcttat ttcctggcga tctcctacag agtctgtaag agatctctca caaccagatg
    18121 gggtatttgg attacagaag aggcttaagt tgattaagga attccgcaag atttgaggct
    18181 aaatgcgtcc gtttacgtgt tcccagcgtc tctttgcaca cttcaccgga gagattacac
    18241 accgagatga cctctaactc ttcttccagc gtcgcgataa atagcgtggg cggcagtttt
    18301 agccttttct gagtcaccag atgaccaatc agattttcct gcacccgacg gaagtcgtct
    18361 tcactccagg tttgcagcaa tgtcagtttg atatcgccaa actgcgcgtg catatccccg
    18421 gcaaactgag tcgtataaaa ggtatgaatt gtgggttgta tcacaatatc aaaagcgcgt
    18481 tcaaccgcgt ttacattttg ttccccggta aacggctggg gttgccagta tacggcatct
    18541 tcggtagttg aaataatgca cggtgaagga acaccgtaca gttcctcact taacggccag
    18601 cttttatgct cttcatgcca cgcatcgcag tagcgtgcag taaaatcttt cagggcttgt
    18661 gcggtcaaat cgtccactaa tttctctctt cacttaaacc agatacactt gtcgtttagt
    18721 ttatctggtt tatgacggtg aaacatgtct tcttatgcaa accatcaggc acttgcgggc
    18781 ctgactcttg gaaaatcaac cgattaccgg gatacctatg acgccagcct actgcaaggc
    18841 gttccacgca gcctgaatcg cgacccgctg ggtctgaaag cggataacct gccttttcac
    18901 ggtacggata tctggacgct gtatgaactt tcctggctga atgcgaaagg tttgccgcag
    18961 gtcgctgtcg gtcatgttga acttgattac accagcgtaa atctgattga gtcgaagagt
    19021 tttaagctct atctcaacag ttttaaccag acgcgtttta ataactggga tgaggtgcgc
    19081 cagacgctgg agcgcgactt aagcacttgc gctcagggta agattagcgt ggcgttatat
    19141 cgtcttgatg aactggaagg ccagccgata ggtcatttta atggcacttg cattgatgac
    19201 caggatatca ctatcgataa ctatgaattc actactgact atctggagaa tgccacctgt
    19261 ggtgaaaaag tagtggaaga gacgcttgtc agccacctgc tgaaatcaaa ctgcctgatc
    19321 acccatcaac cagattgggg ttcgatccaa attcagtatc gtggacgcca aattgacaga
    19381 gaaaaactgc tgcgttacct ggtctcattc cgtcatcaca acgagttcca cgaacagtgc
    19441 gtggaacgca tctttaatga cctgttacgc ttctgccagc cagaaaaatt gagcgtttac
    19501 gcacgttata cccgtcgtgg cggtctggac attaacccgt ggcgcagtaa tagcgatttt
    19561 gtcccatcga ccacaagact ggttcggcaa taaatttttt ctcaattttg cgtgctggat
    19621 tcacgcagaa ggttgtgaaa ggtcatcagg cagggctatt gtaatcaaag ggaatgacga
    19681 tattcgtccc ataaggagtt tttcttgatt acacatatta gcccgcttgg ctccatggat
    19741 atgttgtcgc agctggaagt ggatatgctt aaacgcaccg ccagcagcga cctctatcaa
    19801 ctgtttcgca actgttcact tgccgtactg aactccggta gtttgaccga taacagcaaa
    19861 gaattgctgt ctcgttttga aaatttcgat attaacgtct tgcgccgtga acgcggcgta
    19921 aagctggaac tgattaatcc cccggaagag gcttttgtcg atgggcgaat tattcgcgct
    19981 ttgcaggcca acttgttcgc ggtcctgcgt gacattctct tcgtttacgg gcaaatccat
    20041 aacaccgttc gttttcccaa cctgaatctc gacaactccg tccacatcac taacctggtc
    20101 ttttccatct tgcgtaacgc tcgcgcgctg catgtgggtg aagcgccaaa tatggtggtc
    20161 tgctggggcg gtcactcaat taacgaaaac gagtatttgt atgcccgtcg cgtcggaaac
    20221 cagctgggcc tgcgtgagct gaatatctgc accggctgtg gtccgggagc gatggaagcg
    20281 ccgatgaaag gtgctgcggt cggacacgcg cagcagcgtt acaaagacag tcgttttatt
    20341 ggtatgacag agccgtcgat tatcgccgct gaaccgccta acccgctggt caacgaattg
    20401 atcatcatgc cagatatcga aaaacgtctg gaagcgtttg tccgtatcgc tcacggtatc
    20461 attatcttcc ctggcggtgt gggtacggca gaagagttgc tgtatttgct gggaatttta
    20521 atgaacccgg ccaacaaaga tcaggtttta ccattgatcc tcaccggccc gaaagagagc
    20581 gccgactact tccgcgtact ggacgagttt gtcgtgcata cgctgggtga aaacgcgcgc
    20641 cgccattacc gcatcatcat tgatgacgcc gctgaagtcg ctcgtcagat gaaaaaatcg
    20701 atgccgctgg tgaaagaaaa tcgccgcgac acaggcgatg cctacagctt taactggtca
    20761 atgcgcattg cgccagattt gcaaatgccg tttgagccgt ctcacgagaa tatggctaat
    20821 ctgaagcttt acccggatca acccgttgaa gtgctagctg ccgacctgcg ccgtgcgttc
    20881 tccggtattg tggcgggtaa cgtaaaagaa gtcggtattc gcgccattga agagtttggt
    20941 ccttacaaaa tcaacggcga taaagagatt atgcgtcgta tggacgacct gctacagggt
    21001 tttgttgccc agcatcgtat gaagttgcca ggctcagcct acatcccttg ctacgaaatc
    21061 tgcacgtaat ctcccctccc ccggtgacgt ttgttgccgg gttttctcgt ttttggtcac
    21121 ttactcatca actcatttca tttgttatat gaatgtttct taccaccctc acgcgacaaa
    21181 tatcatcaca gttaatatgt catacaattt atgttgcaac gcaaacgttt ccctattttc
    21241 ataaaccgta ttttatcgct atgaaaaaga aattatcgcc atgattaact aaaagtattg
    21301 attttttcag ttcaacctac atatattgcg cgccctggaa gaagtcagat gtcgtttaat
    21361 gggcaaatat tgcccttaaa ttctctttta cttttgattt acagagtaaa gcgttgggat
    21421 aatctatctt ccaagtagat tattgtattt gagatcaaga tcactgatag atacataact
    21481 tgtgtgtatc tttccgccct caaattatta cggcggtaaa tgattaagcc atcgccgata
    21541 gacagatttc atttttacgg tcaggcacct tcccgggctg aactggctaa aagctgaatt
    21601 atttgcattc ctccaggaga aatagatgga aacgactcaa accagcacga ttgcgtcgaa
    21661 agactctcgt agtgcctggc gcaagacaga caccatgtgg atgctgggcc tttacggcac
    21721 ggcaatcggc gcgggcgtgc tgttcctgcc aatcaacgcc ggtgttggcg gtatgatccc
    21781 gctgatcatc atggctatcc ttgcgttccc gatgacgttt tttgctcacc gcggcctgac
    21841 tcgcttcgta ctgtctggta aaaacccggg cgaagacatc accgaggttg tagaagaaca
    21901 ctttggtatt ggcgcaggta aactgattac cctgctctac ttcttcgcta tctacccgat
    21961 cctgctggtt tatagcgtgg caatcaccaa tacagttgaa agcttcatgt ctcaccagct
    22021 gggtatgacg ccaccgccgc gtgcgattct gtcgctgatc ctgatcgtgg gtatgatgac
    22081 catcgttcgc ttcggtgagc agatgatcgt taaagcgatg agtattctgg tgttcccgtt
    22141 tgttggcgta ttgatgctgc tggctctgta cctgatcccg cagtggaacg gcgcagcact
    22201 ggaaacgctg tctctggaca ctgcatctgc aaccggaaac ggtctgtgga tgaccctgtg
    22261 gctggcaatt ccggtaatgg tgttctcgtt caaccactct ccgatcatct cttctttcgc
    22321 cgttgcgaag cgtgaagagt acggcgatat ggcagaacag aaatgctcga agatcctggc
    22381 attcgcacac atcatgatgg tgctgaccgt aatgttcttc gtcttcagct gtgtactgag
    22441 cctgactccg gcagacctgg ctgcggctaa agagcagaac atctcgattc tgtcttacct
    22501 ggctaaccac tttaacgcac cggttatcgc gtggatggct ccgattatcg cgattatcgc
    22561 tatcaccaaa tccttcctcg gccactacct gggcgcacgt gaaggcttca acggtatggt
    22621 gattaaatct ctgcgtggta aaggtaagtc tatcgaaatc aacaagctga accgtatcac
    22681 tgcgctgttc atgctggtaa cgacctggat tgttgccacc ctgaacccga gcatcctggg
    22741 tatgattgaa accctgggcg gtccaatcat cgcgatgatc ctgttcctga tgccgatgta
    22801 cgcaattcag aaagtaccgg caatgcgtaa gtacagcggt cacatcagca acgtattcgt
    22861 tgtcgtgatg ggtctgattg caatctccgc aatcttctac tctctgttca gctaagtcct
    22921 ttcgcgccgc tttcgggcgg cgcttcctcc gttttaacgc gatgtatttc ctatgattag
    22981 cgtattcgat attttcaaaa tcggcattgg cccttccagt tctcataccg ttggaccaat
    23041 gaaagcgggt aaacaattta ccgacgatct gattgcccgt aacctgctta aagacgtgac
    23101 ccgcgtggtg gttgacgtgt acggctcgct ctctctgacc ggtaaaggcc accacactga
    23161 tatcgccatt attatgggcc tggcgggtaa cctgccggat accgtggata tcgattccat
    23221 ccctggtttt attcaggatg tgaatactca tggtcgcctg atgctggcaa acggtcagca
    23281 tgaagtggag ttcccggttg atcagtgcat gaacttccac gccgacaacc tttctctgca
    23341 tgaaaacggt atgcgcatta ccgcgctggc gggcgataaa gtcgtttaca gccagactta
    23401 ctactctatt ggcggtggct ttatcgttga tgaagagcat tttggccagc aggatagcgc
    23461 accggttgaa gttccttatc cgtacagttc agcagccgat ctgcaaaaac attgtcagga
    23521 aaccgggctg tcactctctg gcctgatgat gaaaaacgag ctagcgctgc acagcaaaga
    23581 agagctggaa cagcacctgg cgaacgtatg ggaagtcatg cgtggcggta ttgagcgcgg
    23641 tatttccacc gaaggcgtgt tgcctggcaa actgcgcgtt ccacgccgtg ctgcggcact
    23701 acgccggatg ctggtcagcc aggataaaac caccactgac ccgatggcgg ttgttgactg
    23761 gatcaacatg tttgcactgg cagtgaacga agagaacgct gctggcggac gcgtggtgac
    23821 tgcgccgact aacggtgcgt gcgggattat cccggcagtg ctggcgtact acgacaagtt
    23881 tatccgcgaa gtgaacgcta actcactggc tcgttacctg ctggtagcca gtgccattgg
    23941 ttctctttat aagatgaacg cgtcaatttc tggtgctgaa gtcggctgcc agggtgaagt
    24001 tggtgtggcg tgctcaatgg cggcggctgg tctggcagaa ctgttaggtg caagcccggc
    24061 gcaggtgtgc atcgcggcgg aaatcgccat ggagcacaac ctcggtctga cgtgtgaccc
    24121 ggtcgccgga caggtccagg tgccatgcat cgagcgtaac gccattgcgg cagtaaaagc
    24181 ggtgaacgcc gcacgtatgg cgctacgccg taccagcgag ccgcgcgtct gcctcgataa
    24241 agttatcgaa accatgtacg aaacaggtaa agatatgaac gccaagtacc gcgaaacctc
    24301 tcgcggcggc ctggcaatga agatcgttgc ctgcgattaa tcgctctcca gaggcctcgt
    24361 tttgcgaggc ctcttcccga tttctcatcc agccgtagcc tgttccggca tcgaatgtta
    24421 cccttatcgc ctgatcttta agggggttat cgtggctgtt catttgctta ttgtcgatgc
    24481 actgaatctt attcgtcgca ttcatgccgt tcagggatcg ccctgtgtcg aaacctgcca
    24541 gcatgcgctc gatcagctca ttatgcacag ccagccaacc cacgcggtcg ccgtttttga
    24601 tgatgaaaac cgcagtagcg gctggcgtca tcagcgttta ccagattaca aagcgggtcg
    24661 accgccaatg ccggaagagt tgcacgacga gatgcctgca ttacgcgccg cctttgagca
    24721 acgcggcgtc ccgtgctggt caaccagcgg caacgaagcc gatgacttag ccgccacgct
    24781 ggcggtcaaa gtgacacagg ccgggcatca ggcaacgatt gtttcgacag ataaaggcta
    24841 ctgtcagtta ctttcaccga cattacgtat tcgtgattac ttccagaaac gttggctgga
    24901 tgcgccattt atcgataaag aatttggcgt tcaaccgcag cagttgcccg attactgggg
    24961 acttgcgggg atcagcagtt caaaggtacc gggtgttgcg ggaatcggac caaaaagcgc
    25021 cacgcagctg ctggtcgagt ttcagagtct ggaagggata tatgagaatc tggatgcggt
    25081 tgccgaaaag tggcgcaaaa aattagaaac ccataaagag atggcgtttc tgtgccgcga
    25141 tattgcccgc ttacaaaccg atttgcatat cgacggcaat ttacagcaat tgcggttggt
    25201 acggtaacgg cgagccggat gcaaacgatt atcaacacat tgaatttaat gcacttatat
    25261 accggataag acgcggctag cgtcgtatcc ggcattatca catcagcgca tttaccaggc
    25321 ggtatggtaa agctctacaa tatcctcaag cgttgcttca cgcgggttgc caccggtaca
    25381 aacatcatcc agtgccgcct gcgccagtgc cggaatgtct tccttgcgta caccaacatc
    25441 acgcaaatgt ggcggaatac cgacatcacg gttgagagca aacaccgctt caacagcggc
    25501 attacgcgcc tcttccagcc actttcacgc ccataacgcg cgcgatatcg cggtacttct
    25561 caccggtaaa gtcagcgtta tagcgcatga catgcggtaa caggatggcg ttcgcaacac
    25621 cgtgtggagt gttgtaaaac gcgcccagtg gatgcgccat accatgcacc aaccctaacc
    25681 caacattcga gaagcccata cccgcaacat actgcccgag cgccatttct tctccggcat
    25741 ccttatcacc agcaaccgat cctcgcagcg ccccagcaat gatttcaatc gctttaatgt
    25801 gcagtgcatc ggttagcgcc cacgcgccac gggtaatata cccctcaata gcatgagtga
    25861 gcgcatcgac acccgtcgca gctttcagcg ctggaggcat accatccatc atgtcagcgt
    25921 caataaacgc cacctgcggg atatcatgcg gatcaacgca aacaaacttg cgccgtttct
    25981 cttcgtcagt gatcacgtag ttaatggtca cttctgccgc agtacctgct gtggtaggaa
    26041 ttgccagaat cggtacactg ggtttattgg tcggggaaag cccttccagg ctacgcacat
    26101 cggcaaactc cgggttgttg ctgataatgc caatcgcttt acaagtatcc tgtggagaac
    26161 caccaccaat agcgatcagg taatccgcgc cgctattctg gaatacaccg agcccttctt
    26221 tgacgacagt aattgttggg ttgggcacta cgccgtcgta aatcgcccat gccagccctg
    26281 cagcatccat cttatcggtc actttcgcca ccacgccgca ttgcaccagc gttttatcgg
    26341 tgacgatcag cgccttctga taaccacggc gtttcacctc atcggttaaa gccccaacag
    26401 caccccgacc aaaccatgcc gtttcgttca gaatcattct gttagccatc atccttctcc
    26461 ttgttgcttt acgaaattac tcttcaatcc gtaacccata ggttttgaat ttctccagca
    26521 ctacggcaat ctcttcatcg ctcagcactg gcaccgggtc cgtaatcgcc agggtcgtca
    26581 ggtaaagttg cgccagcact tcaacttcat gcgccagcca taacgctttt tccagattca
    26641 cctcacaagc gataagccca tgatgttgta acaaagttgc cttacgattt ttgagagcca
    26701 gcgcaacatg ttcagaaagt tcgcgtgttc caaaggtcgc ataaggcgcg caaggaatag
    26761 aattaccacc tgccgccgca atcatgtagt gaatagcggg gatcggtcgg ttaagaatgg
    26821 aaactgctgt gcaatgaacg gcatgattgt gaacaaccgc gttggcatcc ggtctgcttt
    26881 gataggccgc catatggaaa cgccattcgc ttgaggggag ctttccttcc tcatgtttac
    26941 cgttaccatc aataaaggca atatgcgact ccgtcagttt ttcatatgga atgcctgtag
    27001 gcgtaatcag catcccatcc tgataacgta cactgacgtt ccccgctgtc ccctggttca
    27061 gtcccaggcg ggtcatttcc aggcaagtgt caataatctg acgagcaagt ttatttcgtt
    27121 ccattagcta cctctctctg attcaaaaca gggcaataat gttgttcctt tcacactatt
    27181 gaattagccg tttaattacc caccat
//
LOCUS       DAJVUK010000042        26815 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.042, whole genome shotgun sequence.
ACCESSION   DAJVUK010000042 DAJVUK010000000
VERSION     DAJVUK010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26815
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.042"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..326)
                     /gene="rpnB"
                     /locus_tag="OQQ57_001652"
     CDS             complement(<1..326)
                     /gene="rpnB"
                     /locus_tag="OQQ57_001652"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnB"
                     /protein_id="HCS1956452.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLDA"
     gene            complement(523..1296)
                     /gene="hisP"
                     /locus_tag="OQQ57_001653"
     CDS             complement(523..1296)
                     /gene="hisP"
                     /locus_tag="OQQ57_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HCS1956453.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEAHERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            complement(1304..2020)
                     /locus_tag="OQQ57_001654"
     CDS             complement(1304..2020)
                     /locus_tag="OQQ57_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1956454.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGIYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVLHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            complement(2017..2703)
                     /gene="hisQ"
                     /locus_tag="OQQ57_001655"
     CDS             complement(2017..2703)
                     /gene="hisQ"
                     /locus_tag="OQQ57_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter permease HisQ"
                     /protein_id="HCS1956455.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SGLIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="OQQ57_001656"
     CDS             complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="OQQ57_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HCS1956456.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(3796..4578)
                     /gene="argT"
                     /locus_tag="OQQ57_001657"
     CDS             complement(3796..4578)
                     /gene="argT"
                     /locus_tag="OQQ57_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HCS1956457.1"
                     /translation="MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
                     VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(4844..5413)
                     /gene="ubiX"
                     /locus_tag="OQQ57_001658"
     CDS             complement(4844..5413)
                     /gene="ubiX"
                     /locus_tag="OQQ57_001658"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin prenyltransferase UbiX"
                     /protein_id="HCS1956458.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQALADVTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
                     DVINQTVNRVLDQFAITLPEDLFARWQGA"
     gene            complement(5508..7025)
                     /gene="purF"
                     /locus_tag="OQQ57_001659"
     CDS             complement(5508..7025)
                     /gene="purF"
                     /locus_tag="OQQ57_001659"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HCS1956459.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQDYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="OQQ57_001660"
     CDS             complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="OQQ57_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HCS1956460.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RA"
     gene            complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="OQQ57_001661"
     CDS             complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="OQQ57_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HCS1956461.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA
                     PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            complement(8461..9729)
                     /gene="folC"
                     /locus_tag="OQQ57_001662"
     CDS             complement(8461..9729)
                     /gene="folC"
                     /locus_tag="OQQ57_001662"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HCS1956462.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            complement(9799..10713)
                     /gene="accD"
                     /locus_tag="OQQ57_001663"
     CDS             complement(9799..10713)
                     /gene="accD"
                     /locus_tag="OQQ57_001663"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HCS1956463.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVEMGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPLGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPEAPREGVVVPPVPDQEPEA"
     gene            complement(10869..11528)
                     /locus_tag="OQQ57_001664"
     CDS             complement(10869..11528)
                     /locus_tag="OQQ57_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1956464.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFS
                     NPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAA
                     K"
     gene            complement(11611..12423)
                     /gene="truA"
                     /locus_tag="OQQ57_001665"
     CDS             complement(11611..12423)
                     /gene="truA"
                     /locus_tag="OQQ57_001665"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HCS1956465.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAPRKDAAWTLGVNANLPDDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            complement(12423..13436)
                     /locus_tag="OQQ57_001666"
     CDS             complement(12423..13436)
                     /locus_tag="OQQ57_001666"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCS1956466.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="OQQ57_001667"
     CDS             complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="OQQ57_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HCS1956467.1"
                     /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIAVAQLADADALMVR
                     SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
                     LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
                     LDELVQHADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL
                     TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
                     FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            14737..15732
                     /gene="flk"
                     /locus_tag="OQQ57_001668"
     CDS             14737..15732
                     /gene="flk"
                     /locus_tag="OQQ57_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HCS1956468.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
     gene            complement(15729..16907)
                     /locus_tag="OQQ57_001669"
     CDS             complement(15729..16907)
                     /locus_tag="OQQ57_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1956469.1"
                     /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
                     ILPVSAPLKFALLVVGRLILGFGESQLLTGALTWGLGIVGAKHSGKVMSWNGMAIYGA
                     LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGLI
                     WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF
                     GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
                     VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
                     "
     gene            complement(17236..18456)
                     /gene="fabB"
                     /locus_tag="OQQ57_001670"
     CDS             complement(17236..18456)
                     /gene="fabB"
                     /locus_tag="OQQ57_001670"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HCS1956470.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            18615..20621
                     /gene="mnmC"
                     /locus_tag="OQQ57_001671"
     CDS             18615..20621
                     /gene="mnmC"
                     /locus_tag="OQQ57_001671"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HCS1956471.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQQDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAC
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVA
                     TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ
                     NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(20742..21020)
                     /locus_tag="OQQ57_001672"
     CDS             complement(20742..21020)
                     /locus_tag="OQQ57_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HCS1956472.1"
                     /translation="MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(21054..21602)
                     /gene="epmC"
                     /locus_tag="OQQ57_001673"
     CDS             complement(21054..21602)
                     /gene="epmC"
                     /locus_tag="OQQ57_001673"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HCS1956473.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
                     LQNYYHTPELTAEQFPWPEALN"
     gene            complement(21602..22411)
                     /locus_tag="OQQ57_001674"
     CDS             complement(21602..22411)
                     /locus_tag="OQQ57_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HCS1956474.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(22411..23235)
                     /gene="mepA"
                     /locus_tag="OQQ57_001675"
     CDS             complement(22411..23235)
                     /gene="mepA"
                     /locus_tag="OQQ57_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HCS1956475.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
                     FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFAPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(23239..24324)
                     /gene="aroC"
                     /locus_tag="OQQ57_001676"
     CDS             complement(23239..24324)
                     /gene="aroC"
                     /locus_tag="OQQ57_001676"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HCS1956476.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGILLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(24359..25291)
                     /gene="prmB"
                     /locus_tag="OQQ57_001677"
     CDS             complement(24359..25291)
                     /gene="prmB"
                     /locus_tag="OQQ57_001677"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCS1956477.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREYFAIYKD"
     gene            25457..26008
                     /gene="smrB"
                     /locus_tag="OQQ57_001678"
     CDS             25457..26008
                     /gene="smrB"
                     /locus_tag="OQQ57_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HCS1956478.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(26081..26794)
                     /locus_tag="OQQ57_001679"
     CDS             complement(26081..26794)
                     /locus_tag="OQQ57_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005007603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HCS1956479.1"
                     /translation="MATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSR
                     VSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDD
                     DFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLMEN
                     GKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDT
                     TSRQPIDSTCRFTYILNMY"
BASE COUNT         6609 a         7336 c         6763 g         6107 t
ORIGIN      
        1 gcatcaagat ggttttgcat tgccgcaatg gaataacgca tcatgcgaaa agccattaat
       61 tcttccggct tactttggtg ctctatcact acataaatat aacccactcc ctcctgcgtt
      121 ttcacagacc acaagaggtc ggaataatat tgccgcaggt cttcatcaat aaaactgttt
      181 ggttccagtt taagcgtcgt taaatcacac agtttgcgca gcggcgcggg aagatgaata
      241 tcaataaaat cccgcgcggt gtctggatgg cgtaaaaaag atttaaatac cgcatcatgc
      301 ggcgtggaag ttgtcgatat tgtcatggcg ttccgtcacc cctcaaattt aagatgacgc
      361 gacaataacc acgattaaca cccaatgcag caggcagttt ttatctttgg acagcgaatt
      421 cagaagtatt tttagcggac tgcaactttt acatttcagc ggaagctgac tcgcaaattc
      481 cccatgaaaa tactccggca gcgttagcca ccggagagga aattatttca gcgatccctt
      541 aaggaactgt tgcagacgag ggctttgcgg gttgccaaat aactgctccg gcgcgccctc
      601 ttcttctatt ttcccctgat ggaggaaaat gacatgagta gaaacatggc gagcaaagcc
      661 catttcgtga gtcactacca ccatggtttt cccctcttct gccagttgct gcataatacg
      721 caacacttcg cctaccagtt caggatcgag cgccgaggta ggttcatcaa acagtaaaac
      781 ttccggttcc atcgccagcg cccgcgcgat agaaacacgc tgttgctgac cgccggaaag
      841 atgcaccgga tatttcccct gcgcacgttc gtctatcccg acttttgcca gatacttgac
      901 cgcccgctcg tgcgcttcct gcttgctcag gcccaacacc tgaatcggcg cttccatgac
      961 gttttccagc accgtcatat ggctccagag attgaagtgc tggaatacca tcgtcaggcg
     1021 tgtgcgcagt aagcgcagtt gatttttatc ggcgactttg agttgaccgt ctttgtcgcg
     1081 caccagattg atcgtctggc cattgaccac gatcgaccct tcactcggtt tttcgaggaa
     1141 gttaatgcag cgcagaaagg tacttttccc cgatcccgac gatccgatga tgcttattac
     1201 atctccggca ttcgcttgca gtgagacccc tttcagcact tcatgttcgc cgtagcgttt
     1261 gtgcaaatcg ataacgttta atttattctc ggacatcgta ttctcagtgc gttgaagaag
     1321 gtttcacatg ctgcaaccag cgtttttccg ctctgcgaaa gaggctgatc aggacataag
     1381 agatgattaa atagagcacc gcggcaatgc cgaaggcggt aaaaggttga tacgtggcgg
     1441 cgttaatatc gcgggctatt ttcagcagat ccggcacagt ggccgtaaac gccagcgcag
     1501 tagagtgcag catcaggatc acttcgttgc tgtatgccgg taacgcaata cgcagcgcag
     1561 aaggcaaaat aatgcaacga tacattttaa aagtcgagaa gccataggct ctggcggctt
     1621 caatttcccc atgcagaacc gaacggattg ccccagcaaa aatctcggta gtgtaagcgc
     1681 aggtgttaag cgtcagcgcc agcacggtac agttcaggcc actgcggaag aaagcgttaa
     1741 ggaattcggt tcccttaaca atctcaagcg tgtatatgcc ggaatagaac accagcaact
     1801 gaacatacag cggcgtaccg cgaaaaatat aggtaaataa ccagattgga aactggatgt
     1861 atttattact ggagacacga ccaatcgcca gaaacagcgc caggactccg cctatcacta
     1921 ccgacaaaat aagcagccac agagtgatcg ccacaccagt aaagcgataa ccgtcggtcc
     1981 acagcagcgg tttccagtat tcatgtaaga tttcgatcac aggtcagccc tcttcacacc
     2041 cacggagtag cggcgctcaa ggaacagcag cacaccattg gaaacagtgg tgaaaaccag
     2101 gtaaatcacg ccacagacga tggcgaaata gaacggttcc caggtacttt tgcctgccag
     2161 ttgggtggct ttgaccacat cttccaggcc gagtaacgaa accagtgcgg tagatttgag
     2221 gatcacctgc cagttgttgc caatgcctgg cagggcgtaa cgcatcatcg ccggaaacat
     2281 gatccgccga aacacttgcc cacgagtaaa accgaacgcc gtcgccgcct ctatatgtcc
     2341 tttcggcact gccataaaag caccacggaa cgtttcggta aaataagcac cgtagataaa
     2401 accgagagtg ataataccag cgaccatcgg atcgatatca atctgcccga cgcccatcgc
     2461 ctccgtcacc gtgtttagcg caatctgcaa accgaagaaa atcagcagca tcaacactaa
     2521 gtccggcacg ccacgaatca gcgtggtgta cccttcgaaa atcagccccg aaagccgatt
     2581 ttgcgagagc ttaccgccag cgccaattaa accgatgatt acagcgagca ctacagagct
     2641 gatagccagc tccagcgtga cgagcgcccc ctgtaaaata acacctgaaa acccatataa
     2701 catgctgcct gtcctgtcgt gtgtggtgaa ttaccgcctc ttgtctccct ccggttaccc
     2761 gaagggagcg ggctttcttt caccgatggc gattagccac cataaacatc aaaatcgaag
     2821 tactttttcg ctaatttctc gtaagtaccg tcagcgcgca tttcggcaaa ggctttgttc
     2881 agtgcttcgc gcagttcgtt atcttcttta cgcaggccca tgccggtccc tacgccaaac
     2941 agtttttcat ctttaacaga cgggccaccg aatttgtaat ctttaccgac aggttgtttg
     3001 aggaaacctt cgctggcagc gacctcatcc tggaacgcgg catcaatacg tccggcagtc
     3061 aggtcagaat aaatgttgtc ctgcccctga tacgagacga tttcaatgcc ttttggtgcc
     3121 caatgttcat taccgaacgt ctcctgggtg gtgccctgca atacgcctac ccgtttgcct
     3181 ttcagcgact cgactgtcgg ctgaatgtca gaatttttcg ccaccaccaa acgagaatcg
     3241 gcagcgtaca gtttgtcggt gaaggctatt tcttgctgac gtttttccgt aatggaaagc
     3301 gatgacatga tggcgtcaat cttcttcgct tttaaggacg ggattaacgc atccagcgga
     3361 ttttcgacaa acgtacattg cgtattgatg cgtttgcata attcctttgc cagatcgata
     3421 tcgaagccaa ccagttcgcc ttgtgaattt tttgattcaa atggcgcata ggtcgggtcg
     3481 gtaccgatgc ggatgttttg cggaatcgca gcaaatgccg cagttgcgct ggagaaggcc
     3541 agaaccagag agagcgatag caccagtttt ttcataatgt cctcaactga cagtcttttt
     3601 atagggaata tttacaggtt tgttacactt atcgtgccat aaaattgacc atcaaggcaa
     3661 aatatcccgc cccgttagat gtattatttt tcattaaaaa tgcttaagta tgcatttcaa
     3721 tgcaccacga tagtgcaaca aacctagcgt gcaccatgat gatcattcca tcaggtacag
     3781 cttcccagcg acgtatcagt caccgtagac attaaagtcg aaatactttt tcgccatctt
     3841 gtcgtaggtg ccgtcctgac gcagctcgcc aagcgcctta ttgaaggcag ccgtcagttc
     3901 agcatcatct ttacgtagcc ctacaccggt gccatcaccg aagtattttt tgtcttttac
     3961 tgatgagcca gcaaaggcga aatctttacc agcaggttgc ttgaggaatc cttcgctggc
     4021 agcaacttca tcttgtaacg cagcatccag acgtcctgca gccagatcgg aatagaccaa
     4081 atcctggttg gcataggcca ccacatccac gcctttgcta cgccaggtct cgttagcgta
     4141 agcttcctgg gttgatccct gcagcacacc aacatgttta cctttcagtg aatccagcgt
     4201 tggctgaatc ggtgaacctt tggcagcaat caaacgagaa tctgcggcgt acagcttgtc
     4261 ggagaaggca atctcctgct gacgtttatc ggtaatggaa agcgacgaaa taatggcgtc
     4321 gatttttttc gctttcagtg aggggatcag cgcgtcaaag tcactggcaa cccaggtaca
     4381 tttcacctgc atccgtttgc acatctcgtt accgagatcg atatcaaagc caacaaaatc
     4441 acctttagca tctttcgacg agaacggcgc ataggtggta tcggttccga tacgtaccgt
     4501 ctccggtagc gccgcatagc tggaagccgc tgcggagaga ccgactaaca aagacagagc
     4561 gagaatcgac ttcttcatac ataaccctca agtgaaaatg gcttttttat gttgtgtatt
     4621 gtgttgtgtg tttgcaggct ctttcatgca ggtcttatgc catcttgacg acaacagtaa
     4681 cattcaacgt taaatatgtt aataagacgt tgcattattg tcctgaagtt gaagatagca
     4741 ggtatagcgg ttgaatcgca gcgtttcgat tgaatggcag aaacaaaatg tcgaggattt
     4801 gatcgcggtt gcaaaattgc cctgaaacag ggcaacagcg gagttatgcg ccctgccagc
     4861 gggcaaagag atcttcagga agggttattg caaactggtc aagaacacga ttaaccgtct
     4921 gatttatcac atcatcaagg gattgcgggc gatgataaaa cgccggaaca ggaggcataa
     4981 tcaccgcacc gatttctgcc gcctgagtca ttaaacgcag atggcctaag tgcaatggtg
     5041 tttcacgcac gcagagcacc aacgggcgac gctctttcag caccacatct gccgcacggg
     5101 tcagtaagcc atcagtatag ctatggacaa tgccggaaag ggttttgatt gaacagggta
     5161 aaatcaccat ccccagcgtc tggaaagaac cggaagagat gctggcggaa atatcgcgcg
     5221 catcgtgcgt gacatcagct aatgcctgca cttcgcgcag ggaaaaatcc gtttcgaggg
     5281 ataaggtctg gcgcgccgcc tggctcatca ccagatgcgt ttcgatatct gtgacatcgc
     5341 gcagaacctg taataagcgc acgccataaa tcgcgccgct ggcaccgctg atgcctacaa
     5401 tgagtcgttt cataaatagt tgccctgtca gacttgcagg cagactttgc agtatttcgg
     5461 cgggagttgc aagtcagggt gccagaccgg caccctcagc gaaggcatca tccttcgtta
     5521 tgcatttcga gattttccac ttcgttctga cgttgcactg ctttggcgtc atcattacgt
     5581 aacgtatcga ggaaatcgag gtagtcctga tcaacatctt tggtgacgta gacgccgttg
     5641 aacaccgagc attcaaactg ctggatatcc ggattttcag cgcgaacggc gtcgatcaga
     5701 tcgttcagat cctggaaaat caacccgtca gcaccgatga tctggcgaat ttcatcaact
     5761 tcgcgaccgt gagcgatcag ttccgtggcg ctcggcatat caataccata aacgttcggg
     5821 aagcgaattt ccggggccgc agaagcgagg tacactttct tcgctccggc ttcgcgtgcc
     5881 atctcgataa tctgctcaga agtggtgcca cggacgatgg agtcgtcgac cagcaggacg
     5941 tttttatcgc ggaactcggc gcggttggcg ttcagtttac ggcgcacgga cttacgacgc
     6001 agctgctggc ccggcatgat gaaggtgcgg ccaacatagc ggtttttaac gaagccctgg
     6061 cggtacggct tgcccagaat acgagcaatt tccagcgcga tatcacacga ggtttccggg
     6121 atcgggatca ccacgtcgat atccagatct tcccattcgc gggcaatttt ctcacccagt
     6181 ttcgtgccca tattcacacg cgcgctgtaa acggaaattt tgtcgataaa cgagtccggg
     6241 cgggcaaagt atacatactc aaacaggcac ggattgctga ccggattgtc agcacattga
     6301 cgggtaaaca actgcccttc ttcagtgatg taaatcgctt cgcccggcgc gacgtcacgc
     6361 aggaaatcaa agcccagcgt atcgagcgct acgctttcgg aagcgaccat atattctgta
     6421 cggttctcgt caatatcacg ttttcccagt accagcggac gaatcccgtt tggatcgcgg
     6481 aaagcaacca taccgtggcc gataatcatc gccacacagg catatgcgcc gcggattaag
     6541 cggtttgtgg cagcaatggc agcgaaaata ttgtcggctt ccagcgggta gtggcggaag
     6601 ttgtccagct cgctagcgaa gatattaagc agaatttccg agtcggaagt ggtgttgatg
     6661 tggcggcgtt tttcttcaaa cagtttttta cgcaactcgt gagcgttggt cagattgccg
     6721 ttgtgggcaa gcgtaatgcc atacggggag ttaacgtaaa acggctgcgc ttcagaggcg
     6781 ctggagctgc cagccgtagg gtaacgcaca tgaccaatgc ccatattgcc ctgcaaacgc
     6841 tgcatatggc gagcttcaaa tacatcgctc accagcccgt tcgctttacg caaacggaag
     6901 cagttattgg catctatggt gatgatgccg gcggcatcct gaccgcgatg ctgaagcacc
     6961 gttaaggcat cataaatcga ctggttaacc ggcataacac cggcgatacc gacaataccg
     7021 cacatacgtc tttttcctcg ttaagccaca tctcagagca cttacgctct gggcaagaaa
     7081 cttgacgagc tttgcagata atcaaaaaac catctgatga taaaactgaa ctgcgggatc
     7141 agctgtgatt tgctccagtc ttcgcttttc gacaccccgg taaaggagtc gagaaagaag
     7201 agaatggcgg caacaatcaa cacaccgcgc aacgcaccga aacagacgcc cagcacccga
     7261 tcggtgcctg acaaccccgt tttctccacc aactggccta tcacgaagtt cacgatagca
     7321 ccaacgatca gggtagcgat aaacagtacc gcgatggcaa ttccatttcg aaccagttcg
     7381 tcttcaaagc ccgtaaacca gactgacagg taagtgtagt aatgactggc aacaaagaaa
     7441 gcacaacccc atgtcaccag cgataacgct tcacgaacaa agccgcggat caggctaacc
     7501 agagaggaaa aagcaatcac cgcgattatg gcgtaatcaa tccagaccat atgtgtccca
     7561 cgattttacg ccctgtcatc ctgttcgggg cgcattctaa cagaaaaaga aaacgtttgc
     7621 gtagggattt ccttcccacg catcaataaa aatggcgctg aaaaaatatt caacgccatc
     7681 gactttttat gcctttgcgg catcgtgcaa tgcgtgtcgg atgcggcgta aacgccttat
     7741 ccgacctacg gttctaacac tgcccaagcc tgataagacg cgccagcgtc gcatcaggca
     7801 agactgtatt aattcggcgt atagcccatt accacgccac ttaagccaga aagttgcttc
     7861 aactcaccca gcgaaccttt cagcttatct ttcgaggcat ccggcccaac cagaatacgg
     7921 gtaattttac cctgcactgg cgtggatggc gacgtataaa cccgataacc ggcaccgcgc
     7981 agcttaccga caatctcatt cactttatcg gcatttttca gcgcacccag ttgcacaaca
     8041 taggctttac ccgttggcgc tgctttttct tccacgaccg gcttcggttc tggcttcggc
     8101 gcaggtggtg cttcaacctt cggtttaggc ggctccaccg gtttcggctt cggtggggcg
     8161 accggtgcag gttccggttc aaactcggtg ttattggctg caatagtggc cggatcgagc
     8221 gacggtgctg cggcatcacc tgcccgcacc tcttccgctg cgccttccgg cggctgcgtc
     8281 ggcaacgcct gggtggcggc tggcatcata tcaggctcat cgcgatcgcc cgcttttgga
     8341 accagcggga tagccgcaaa ctcatcctga taatgttttt tctgcccgtc cagcagccct
     8401 ggaagtacaa tcacccccag cgccaccagc acgatcgtgc ccactaaccg attctgaaac
     8461 ttacttgcca ccgcttctcc tcgcgtcaat cacttccatg acatgtgcga ccgtgtggaa
     8521 agaaccacac accagcacgg tgtcttccgc tttagcgtcc gccattgcgg catcccatgc
     8581 ctgcgcaacg ctatcaaatg atttgccgtt acccaaatgc tcaagcagtt gttctgccgt
     8641 ggcaccgcgc ggcccttcca gtggcgcaca ataccagtca tcaaccacgc ttttcaacca
     8701 ggccagagtt ccggcaatat ctttatcatg tagcataccg ataaccgcca gcacgcgccc
     8761 gtttttcggt agcgctttca tacgcccggt gagatattcc gccgcatgtg gattatgcgc
     8821 gacatcaaaa ataacgcgtg gcgactcgct cacaatctgg aaacgtcccg gcaaaattgc
     8881 gctggcaatc ccgtcgcgaa tggcattttc actgacttcc agcccgctgg cacgcagtgc
     8941 cgccagcgct gttgcggcat tcggttgcgg gacaagcggc aacggcagat tttccagcgt
     9001 gccgtgagca tcgctaaacg cccagtcatg atcggtgacg gaatagttcc actcaacgcc
     9061 ccgacgttgt aacagtgcac ctttttcctg cgccacatca gcaatggtag aaggcatttc
     9121 cggctcaccg acaattgccg gttttgcgct gcgaaagatg cctgctttct cgcgaccaat
     9181 actttcgcga tctggcccca gccagtcggt atgatccagc gcaatactgg ttactaccgc
     9241 gacatcggca tcgacaatat tggttgcgtc cagacgaccg cccagcccta cttccagaat
     9301 caccacgtca agttgtgcct gtttgaacag ccacaacgcc gacagcgtac cgtactcgaa
     9361 ataggtcagg gaaatatcac cgcgtgccga ttcaatctcc gcaaaagagg cggtgtgggc
     9421 cgattccggc aattcctgcc cctgcacacg tacgcgctcg gtataacgca ccagatgcgg
     9481 cgaactgtag acgcccactt tgtaccctgc cgccatcaga atcgactcca gcgtacggca
     9541 ggtggtgcct ttgccattcg tacccgcaac ggtaaacaca aatggcgctg gtttcagaac
     9601 gccaagacga gccgcgacct ggctcacgcg ctcaaggccg agatcgatag ttttactgtg
     9661 caggttttcc agataagaaa gccacgaagc cagaggcgac gcggcttgag gagtgcgttt
     9721 gataatcatg gtatccgctg attcgttacg gtgagaatag caaaagggca gagccagtgg
     9781 ccctgccctt atcagttatc aggcctcagg ttcctgatcc ggtaccgggg gtaccactac
     9841 gccttcacgc ggcgcttcag gattcggcgc tggcagattc atcaacttcg ccagaatgct
     9901 cgccagtttc aggcgcattt ccggacgacg gacgatcatg tcgatcgcgc ctttctcgat
     9961 caggaattca ctgcgctgga atcctagcgg cagtttttcg cgaacggtct gttcgataac
    10021 acgcggaccg gcaaagccaa ttaacgcttt cggttcagcg atgttgagat cgcccagcat
    10081 ggcgaaactt gcagaaacac cgcccatcgt cgggtcggtc agcacggaga tgtacggcaa
    10141 gccgcgctcc tgcatttttg ccagtgccgc agaggttttc gccatctgca tcagcgacat
    10201 cagtgcttcc tgcatacgtg cgccaccaga ggcggagaag cagatcagcg ggcagttatc
    10261 ttccagcgcc tgctcaacgg cacgcacgaa acgtgcaccc acaacagacc ccattgaacc
    10321 gcccataaag gcgaactcga atgccgcagc gacaaccggc attccataca gagtgccttt
    10381 catcaccacc agcgcatctt tttcgccggt ttctttctgc gcagaagcca gacggtcttt
    10441 atacttcttg gagtcacgaa acttcagcac atctttcggc tcaagctcgc tacccatctc
    10501 cacaaggctt ccttcatcta acaggctatg caggcgatta cgcgctgtca tacgcatgtg
    10561 atggtcacac ttcggacaga cctcaagatt acgttccagc tcagcgcggt ataaaacctg
    10621 accgcagcta tcacacttag tccacacccc ttcaggaatg ctcgccttgc gggtgggagt
    10681 aatgttgctt ttaattcgtt caatccagct cattagggac ctttctgtct gaacctggtt
    10741 cgatgccagt tttatctttg gggacgcata atgccatttt tgcccccaac agaccatgaa
    10801 tgttgcacat taaaacataa cagcccgaaa ctttggataa aaaagtggtc gaaccgcgga
    10861 gttacttttt attttgcggc gcgtgccgca gcgcgtttgt gacgaataaa ttcgaaaacc
    10921 ccaggcaata ttgaaacaaa aataatgcca acaatcatca gcttaaggtt gctctgaatg
    10981 aaggggagca tgccgaagaa ataacccgcg taggtaaaaa tcagtaccca caacagtgcg
    11041 ccgatcacgt tataagcggc gaaatgacgg tacgacatgt ggcccattcc cgcaacaaac
    11101 ggcgcgaacg ttctgacgat cggtacaaaa cgggcgagaa taatcgtttt gccgccatgt
    11161 ctctcgtaaa actgatgagt cttatcaaga taactgcaac gaaagatttt cgaatccggg
    11221 ttactgaaca gtttgtcacc aaataaccgt ccaatggtat agttcactgc atcaccgaca
    11281 atagcggcaa tcaacataag caccaccatc atatggacat tgagatcgtt agtttccagc
    11341 gacgccaatg caccagcaac aaacagcagc gaatcaccag gcaggaatgg cgttaccacc
    11401 agccccgttt cgcagaacag aatcaaaaac agaatggcat aaacccagac gccgtactcc
    11461 gcgaccagct ctgccagatg cacgtcaatg tgcaggataa aatcgatgag gaaataaatc
    11521 aggtccatat ttgcctatgc cttgtactcg tcatctttca ggctgtaact acgttggcta
    11581 cagcctgaaa tgttccgagc attattctcg ttagtccgcc agaaatagcg ggcccattgg
    11641 cggttttgga agatcatacc ggtcagggta atccaccgcg accagataca gcccttccgc
    11701 ttttgccgtt gctgccgcca gcgttctgtc ctttgccgcc agcaactctg ctatccagct
    11761 ctccggctgg ttgtgggcac cgacttccat caggctgccg acaatattcc tgaccatatg
    11821 atgtacaaag gcattcgctt tgatatctac caccacataa ggaccgtgac gcgtgacatt
    11881 aatatgcata acgttgcgcc acggggttcg ggactggcac tgcaccgcac ggaacgaggt
    11941 gaaatcattc tcgcccagca agcattgcgc agcccgatgc atccgttcag cgtccagcgg
    12001 ttcgtaaaaa tgggttaccc ctttactcag taccgccggg cgcagccgat gattgtagat
    12061 gatgtagcga taacggcgag ccgtggcgct aaatcgggca tgaaaatcat caggtacagc
    12121 tttaacccaa cgcacggcga tgtcatcagg taaattcgca tttacgccca aggtccacgc
    12181 cgcgtctttg cgcggcgcgg ttgtttcgaa atgcaccacc tgcccggtac cgtgtacccc
    12241 tgcgtcagta cgcccggcgc agaagacggt gatgggttcg ttcgccacct gggagagcgc
    12301 cttttccagc ttctcctgca cactgcggac ttcattctgc cgttgccagc cgtaatactt
    12361 actgccgtcg tactcaatgc ccagcgcaat tttataaact ggcagttgtt gctggtcgga
    12421 cattagtaca gatactcctg caccagtttc tcggcgattt ttactgccat cagcgcgccg
    12481 ccaaagcgaa cgttatcggc caccgaccag aactggactt gctccggcat accgtagtca
    12541 ttacgcacgc agccaacaga aagatgcgga gtacccgaag catcccctac ctgagtcggg
    12601 aattcgttct cttcagagag cacaatatct tcgccctgag caaacgcatc acgcgcttct
    12661 tctgccgcca gcggacgcag tgcttcaaag ttgaccatct gggcatgacc gtagaatacc
    12721 ggtgcctgga cgacgcttgc cgaaatcatc agcccttcgt cctgcaggat tttgcgtact
    12781 tcgtcaacga tacgacgttc ttcacgcacg ctaccttcgc tatccggcaa caacggcagc
    12841 atattgaacg ccagttgacg accgaagaaa tcttcttcgt caatcggaat gccgttgagc
    12901 aatttcgcac tctgccccgc taacgcatcg accgcttttt tgccctgggc ggaggctgaa
    12961 atcaggctgg taacactgat acgcgacaaa ccgccctgat cgattaacgg tttcagtgcc
    13021 gccagcagct ggctggtcag actgtctggt acggcgatga cattccggtt gcggtaatcg
    13081 gtcagtacaa acgggtttac ttccggcacc accagcggta cgtcgggttc gagagcaaac
    13141 agtccgctgc tgtcgatcac caggcaacct gagttggtcg cttcttcaac ccaggcagcg
    13201 gtagcttctt tgcctgcgac aaaaaatgcc agctgcgcct gcgtccagtc gaattcagcg
    13261 gcatcctgca cggtgattgt tttaccacca aagcgcagtt gttcgcctgc gctttcgtta
    13321 cgtgccagtg cataaatttc cccaaccggg aactgacgtt cagccagcgt ttcaagcagg
    13381 gcttcgccca cagcgccagt tgcgcccagg acggcaatgt tccagccttc agacatggtg
    13441 gtttactcca gaaatagcaa agctccctgc caatgttaca gcagagagca tgaagaagag
    13501 attaacgtgc cggatgatga acggcgttaa aacccagttt acacagcaat gatgccgcac
    13561 tggcgtcatc acaaattaca tacagagatg accattcacg gcgctcaaga tagtttttgc
    13621 gcagtttatc gaactcaccc ggtatcccgg cgactttacg cagcggtgcg tcatcgcggc
    13681 gcacatcata caccaaatgc accagccttt tcagcgtcgg ttgatcgagc gggccatgca
    13741 gcgtaatgcg accaaactct ggcgcgggca gtaatgtatc cagcgcaacg tgctgttcat
    13801 gcccaataaa cttgctataa gcttcaaaca cttgcgtagt accgcgtgct ttaccttcca
    13861 gggtataacc tgcgatatgc ggcgtgccga tatccacttt tgtcagcaac tccacgttaa
    13921 gttccggttc gccttcccag acatccagca ctacgcttaa cttctggcct tcattcaggc
    13981 aggtcagcaa cgcagtatta tcgacgactg cgccacggca ggcgttaatc agaatcgctc
    14041 ccggcttcag gctacggatc agtttttcat ccgccagatg cagcgttttg tacggcccat
    14101 ctttgaagag tggcgtatgg aaagtcagaa tatccgcatg ctgaactaat tcatccagcg
    14161 agcggaaatc accctcatcc ccacggtcag cgcgaggcgg atcgcaaagc aatgttttaa
    14221 tccctaacgc ttccagtcgc gcctgcaatc gacgtccaac gttaccaacg cccacgatcc
    14281 ccaccgtacg gtcgtgcagt gaaaatccat cgcgttcggc aagcatcagt agtgaggaga
    14341 aaacatattc caccaccgca atcgcattac agccaggtgc agcggaaaaa ccaattcccg
    14401 cctgcttcaa ccatgcttca tcgacatggt cggtccccgc agtggcagtg ccaacaaatt
    14461 taatgggttt tcctgccagc aaagattcat tcactttcgt gaccgaacgc accatcagcg
    14521 catccgcgtc tgccagttga gcgacggcga ttggacgccc gggaaccgcg gtcacctcac
    14581 ccaaacggct aaataagtcg cgggcataag gcatattttc atcaacaagg attttcacgt
    14641 ttgtgttacc tgtatgagac gagagttaac cggacaagtg tgccataatc tcgcggccag
    14701 gcatacttgc gaagatttca ggtataagga tacgtaatga tacaacctat ttccggccct
    14761 cctcctgggc aaccaccagg tcagggagat aacctgccgt ctggcgcggg caatcagcct
    14821 ttatccagtc agcaacgtac ttcgctggaa agcttaatga cgaaagtgac ctcactgacg
    14881 caacagcaaa gagcagaact gtgggcgggt atcaggcacg atattggtct gtcgggagat
    14941 tcaccgctgc tttcgcgtca cttccctgcc gctgagcata atctggcgca acgtctgctg
    15001 gccgcgcaaa aaagccattc tgcccgccag cttttagcgc aattagggga gtatttacgt
    15061 ctggggaata atcgtcaggc ggtcacggat tatatccgtc ataactttgg tcagacgccg
    15121 ctgaatcagc tctcaccgga gcaattaaaa accattctca ccctgttgca ggaagggaag
    15181 atggttattc cgcaaccgca gcagcgcgag gcgaccgacc gtcctttatt accggcggag
    15241 cacaatgcgc taaaacagct ggtgaccaaa cttgcggcgg caacggggga acccagcaaa
    15301 cagatctggc aatcgatgct ggaactttcc ggggtgaaag atggcgagtt aattccagcg
    15361 aaactgttta accatctggt gacctggcta caggcgcgtc agacgctaag ccagcaaaat
    15421 acgccgacgc tggaatcact acagatggcg ctaaaacaac ctttagatgc cagtgaactg
    15481 gcggcgttat cggcatatat ccagcaaaaa tatggccttt ctgcgcaatc atcgctttct
    15541 tctgcccagg ccgaggatat tcttaatcag ctttatcaac ggcgggttaa agggattgat
    15601 ccgcgtgata tgcaaccgct gcttaatcct tttccaccga tgatggacac gttgcaaaat
    15661 atggcaacgc gtcccgcgct gtggatactg ttagtcgcga ttatcctgat gctggtctgg
    15721 ctggttcgtt aaccccgacg aaatgacagt atcgtgacaa taatacccag caccgcagag
    15781 atcgccccgg caagaaatac cgaagagtaa ccaaacgtgg tcgccagcat tcccgccagc
    15841 ggcccggaga cgccgagggc gatatcctga aacgcggcgt aaccgcccag tgcggtgccg
    15901 cgaacttgtg aggggacgcg tttaaccacc tccacgccca gcgcaggaaa gataagcgaa
    15961 catccggctc cggttaacgc cgcgcccgct aatgcgaccc atgcacctgg ggcttgccag
    16021 agcagcaaca agcccaccgt ttctacaagc agagagacaa tcgccacttt cacgccgcca
    16081 aaacggtccg gcatccagcc aaacatgacg cgcatcacga caaatgcgcc gccaaacgcg
    16141 gtaagagtaa agcccgccat cgcccatcct ttgctggcaa agtagagcga aacgaaagtc
    16201 ccgataaccg caaaaccaac gccttgtagt gccagcccta accctggttt ccagataagc
    16261 ccgacaacgc tccacagcga tggacgttct cccgccaggg ccggtacttt gcgcactgtg
    16321 ccgttacagg cccacgccag taagggtaat accattgtgg tgatcgccag tgcggcaaaa
    16381 ccgtaatggc tatgaatcaa caggccaagc ggcgcaccaa cagcgagggc accgtaaatc
    16441 gccattccgt tccatgacat cactttgcca gagtgttttg cccctacgat gcctaatccc
    16501 caggtcagag cgcctgtcag taactggctt tcaccaaagc caagaatcaa acgcccgacg
    16561 accaacaggg caaatttcaa cggtgcggag acaggcaaaa tcgccgccag cagcaacgcg
    16621 ccgccagcca gaccacaagc taacatcccc tgaagcgccg aacgttttgc accatattga
    16681 tcggccagtc gcccggcata gccacgcgtc agcaccgtag ccagaaactg aatcccgacg
    16741 gcaatcccga ccatggtatt gccatagccc agatcatgat gaacaaacag cgggataacc
    16801 ggcaacggca gccctacggt catgtaggtg agaaaaaccg caaaagcgat gcggaagagc
    16861 gaaaaattgg cagaagatcg tgtttcggtt tggcttacag cagtcatgca ttactccaga
    16921 atgcagcgca aggcgaggag tatccccgtc tcatctctct ggtttcaggg ttacagtgcg
    16981 ttggcaggat ttaacgcgta cgtcttttca gaaggaaatc gacaaagcgg gaagtttgcc
    17041 tggaactggc ggcgattgtc aatgatgtga aaaagggaac catcaggttc ccttttgcgt
    17101 tagtgccgga ggccgcattg gcgcgtaacg tcggatgcga cgctggcgcg tcttatccga
    17161 cctactccga ctactccgac tactccgact actccgacta ctccgactac tccgactact
    17221 ccgacctact gcgaattaat ctttcagctt gcgcattacc agcgtggcgt tggtgccgcc
    17281 gaagccgaag ctgttagaca taacggtggt cagttcgcga tcggtcgttt cggtcacgat
    17341 gttcagacct gccgcctgct cgtccagctc ttcaatgttg atgctcgggg cgataaagcc
    17401 gtgttccagc atcagcagag agtagatagc ttcctgtacg ccagcagcgc ccagagagtg
    17461 accggtcatg gctttggttg cagaaatcgc cgggctctta tcgccgaaca cttcacggat
    17521 agctgccagt tctttcacgt cgccaaccgg agtcgaagta ccatgagagt tcaggtaatc
    17581 gattggggta tcaacgccgt gcatcgccat cttcatgcag cgtactgcgc cttcgccaga
    17641 cggagcaacc atgtctgcac catcagaggt tgcgccgtag ccaacgattt cagcatagat
    17701 gtgagcacca cgcgccagcg cgtgttccag ctcttcaacc actaccatac cgccgccgcc
    17761 agcgataacg aaaccgtcac ggtgagcgtc gtaagtacgg gaggcttttt ccggggtgtc
    17821 gttgtattta gtagacagcg cacccatcgc gtcgaattcg caggccattt cccagcacag
    17881 ctcttcgccg ccgccagcaa acacgatgtc ctgtttgccc agttggatct gctctactgc
    17941 gttaccgata cagtgtgcgg aagtcgcaca cgcggagctg atggagtagt taacgccatg
    18001 aattttaaac ggcgtggcga ggcaggcaga aacgccggat gccatcgctt tggtgaccac
    18061 atacgggcca accgctttca ggccgcgcgg gccgcgcatt gcgtcagcgc cgaatacctg
    18121 gaaacgcggg gaaccgccgc cagaacctgc aatcaggcca acgcgcgggt tattctggta
    18181 agcttccgga gaaaggcccg catctgcgat tgcctgctcc atagaaagga atgcataaat
    18241 ggatgcgtcg ctcataaagc gcacaacttt gcggtcaatg aggccagtgg tatccagttt
    18301 tacgttgccc cagacgtggc tacgcatgcc ggaatcctta agctcctgag agaaagtgat
    18361 ccctgaacgt ccttcacgca gagatgccag gacttcctgc tggttattac cgatgctgga
    18421 aacaatgccc aggccagtaa tcactgcacg tttcattcaa tacctctgta agtcgcacat
    18481 agagtaagtt tcgaatgcac aatagcgtac acttgtacgc cgaacaagtc cgatcagcca
    18541 tttaatagag aaatttgcgc agccttacac acatcgctaa gatcgagcca ccgcctgtaa
    18601 gacgagtaac ttacgtgaaa cactactcca tacaacctgc caacctcgaa tttaatgctg
    18661 agggtacacc tgtttcccga gattttgacg atgtctattt ttccaacgat aacgggctgg
    18721 aagagacgcg ttatgttttt ctgggaggca accaattaga ggtacgcttt cctgagcatc
    18781 cacatcctct gtttgtggta gcagagagcg gcttcggcac cggattaaac ttcctgacgc
    18841 tatggcaggc atttgatcag tttcgcgaag cgcatccgca agcgcaatta caacgcttac
    18901 atttcattag ttttgagaaa tttcccctca cccgtgcgga tttagcctta gcgcatcaac
    18961 actggccgga actggctccg tgggcagaac aacttcaggc gcagtggcca atgcccttgc
    19021 ccggttgcca tcgtttattg ctcgatgaag gccgcgtgac gctggattta tggtttggcg
    19081 atattaacga actgaccagc caacaggacg attcgctaaa tcaaaaagta gatgcctggt
    19141 ttctggacgg ctttgcgcca gcgaaaaacc cggatatgtg gacgcaaaat ctgtttaacg
    19201 ccatggcaag gttggcgcgt ccgggcggca cgctggcgac atttacgtct gccggttttg
    19261 tccgccgcgg tttgcaggac gccggattca cgatgcaaaa acgtaagggc tttgggcgca
    19321 aacgggaaat gctttgcggg gtgatggaac agacattacc gctcccctgc tccgcgccgt
    19381 ggtttaaccg cacgggcagc agcaaacggg aagcggcgat tatcggcggt ggtattgcct
    19441 gcgcgttgtt gtcgctggcg ctattacggc gcggctggca ggtaacgctt tattgcgcgg
    19501 atgaggcccc cgcactgggt gcttccggca atcgccaggg ggcgctgtat ccgttattaa
    19561 gcaaacacga tgaggcgcta aaccgctttt tctctaatgc gtttactttt gctcgtcggt
    19621 tttacgacca attacccgtt aaatttgatc atgactggtg cggcgtcacg cagttaggct
    19681 gggatgagaa aagccagcat aaaatcgcac agatgttgtc aatggattta cccgcagaac
    19741 tggctgtagc cgttgaggca aatgcggttg aacaaattac gggcgttgcg acaaattgca
    19801 gcggcattac ttatccgcaa ggtggttggc tgtgcccagc agaactgacc cgtaatgtgc
    19861 tggaactggc gcaacagcag ggtttgcaga tttattatca atatcagtta cagaatttat
    19921 cccgtaagga tgactgttgg ttgttgaatt ttgcaggaga tcagcaagca acacacagcg
    19981 tagtggtact ggcgaacggg catcaaatca gccgattcag ccaaacgtcg actctcccgg
    20041 tgtattcggt tgccgggcag gtcagccata ttccgacaac gccggaattg gcagagctga
    20101 agcaggtgct gtgctatgac ggttatctca cgccacaaaa tccggcgaat caacatcatt
    20161 gtattggtgc cagttatcat cgcggcagcg aagatacggc gtacagtgag gacgatcagc
    20221 agcagaatcg ccagcggttg attgattgtt tcccgcaggc acagtgggca aaagaggttg
    20281 atgtcagtga taaagaggcg cgctgcggtg tgcgttgtgc cacccgcgat catctgccaa
    20341 tggtaggcaa tgttcccgat tatgaggcaa cactcgtgga atatgcgtcg ttggcggagc
    20401 agaaagatga ggcggtaagc gcgccggttt ttgacgatct ctttatgttt gcggctttag
    20461 gttctcgcgg tttgtgttct gccccgctgt gtgccgagat tctggcggcg cagatgagcg
    20521 acgaaccgat tccgatggat gccagtacgc tggcggcgtt aaacccgaat cggttatggg
    20581 tgcggaaatt gttgaagggt aaagcggtta aggcggggta atctgctctc gcagtgtttg
    20641 ccggatgcgg cgtgaacgcc ttatccgacc tacgtgtgac gtgtaggcct gataagacgc
    20701 gataagcgtc gcatcaggca tggtgctcca gacgccgcaa cttactgctg tgacgcctgc
    20761 tgaaacaggt tttcccacat atcggtcacc agcgcctggt cacgcggcga caattcaccg
    20821 gcaccaatgg ctttttccag actctggcta acggtcgtat gcaccgcctg agcggagtgg
    20881 tcatcaccac tttccagttc tgcgatggct aatgtcaggt ggccacgcaa atacccactg
    20941 gcaaacaact catcatcact ggcatggtca atcatgccgt cgattaatgc cagaatgcgt
    21001 gattcaaact ccgcgatcat cttctttcct cattgtaaaa cgtggcaccg gcttcagttg
    21061 agcgcttccg gccacgggaa ctgttccgcc gtaagttccg gcgtgtgata ataattttgt
    21121 agtgctttaa tgaagcgtgc cggacgctcg ggaatgccat ttgtcagata atccatcacc
    21181 tgcgcatgta cccgccgttg aaacaccaca cgatccggtt cgaagtcgcc ttccagattg
    21241 tcgcaactga cgttaaacgg atatcccgcc gccacacaga acaaccagtc gagtgcctgc
    21301 ggcttcactt caacatcttc aaactggctt tgcgtttggg catcacgccc atccgggcaa
    21361 taccagtagc cgaaatcaac cagctcacgg cgcgcttttc cggcaataca ccagtgcgaa
    21421 atctcatgaa ttgcgctggc ataaaagccg tgggcaaaga caattcggtt atacggtact
    21481 tccgcatcag caggaagata gatcggttcg tcgtcgcctt taatcagacg ggtattaaat
    21541 tcatcggcaa agcagctatt aaaaatttca atcaactgct catagtggtg tgtactgttc
    21601 attagttcat ccccaaccag tggaggatct cctgtccgtg gctatcgtaa agtaatttgg
    21661 cactcatcac cgccgagacg ataacgatca tcgggcggat cagtttttgt cctttgctca
    21721 gcaccagtct tgaacccatg cgcgcgccga ggaactgccc caccagcatg acaaagcccg
    21781 tcgcccaaat cactttgccg ccgagaataa acagcagcag accgccaatg tttgacgttg
    21841 cgttgagtaa tttggcgtga gccgtggctt tggcgaggtt gaatccgcac agcgtaacga
    21901 aggccagcgc gtaaaacgat ccggcagccg ggccaaagaa tccgtcataa aaaccgacgc
    21961 agccaccggc aattaacgcg aagggtaaac cgtacatccg gcgctggcga tcttcttcac
    22021 ccagctttgg catcagcaag aaatagaggc cgatacaaat taccagaatg ggcaaaatct
    22081 gccgtaagac atcagcctga acgtattgca ccagcagtgc gccgctcatt gagccggcaa
    22141 aggtcatggc gatattgagt ttctgatcgc ttaaactaac cactttgcgg cgaataaagt
    22201 agatagtggc ggaaatagag ccgccgcagg cttgcagttt attggttgcc agcgcgttag
    22261 cgggagacat tcccgcagcc atcaatgccg gaatggtgag taacccaccg ccaccggcaa
    22321 tcgagtcgat aaatcccgcc agcatggcga caaaaaagag aactcccagc aacagcgggg
    22381 aaaccataaa caggctatta aacgtttcca ttagatcacg tgctcatcca gtagcgcctg
    22441 gcaggaaggc ggcaacggag gcggtgtctt cttctcaggc tttgttgttc ctggttttgg
    22501 aggtgcaaac cagctttgca gttctgcccc gcaaccatcg cctggtggcg gtaaaggttg
    22561 atcttcacac tccagactat cggcagggca acgtaatcgt acatgcatat gcgcgcgatg
    22621 ctggaaccag ggtcgcactt tgcgcaacca gtcgcgatcg gtgcccgcat caaggcaaag
    22681 ttgttgttta atcgccggat taacaaaaat gcgcgtgacg tctttgtcct gggcggcgag
    22741 tttgatcaag ctgaaaattt ctggcttcca cagcgtggag acaacgtgtt taccgtcgcg
    22801 ggaaactaag tccagtgctt gcgggcgcaa gagctgcgcg gaggtccagc gagttttcgg
    22861 cagttgcaga aagatatcga catccagtcc ggtctggtgg ctggcatgac cgccgttgaa
    22921 acgcccacca gcgggcatcc ccatatcgcc aatcagcacc gtacccatgc ccagattgct
    22981 cacctggcta ctcagacgct ggataaacat caccagatcc gggtgaccga aatagcgacg
    23041 ctgatcggta cgcatgacct gataatgttc ggactgtatc ggcaacgtgt cagcgccgac
    23101 aatacagcca ttagaaaaac tgcctatcga ttgtgcgcta cccggcacag gttgggttat
    23161 tttttgccac ggcgtcgctg ccaagctagc gctactggca agcagagcca gcagcgcaat
    23221 cgcggttttg ttcatttttt accagcgtgg aatatcagtc ttcacatcgg cattttgcgc
    23281 ccgctgccgt aacaggtgat ccattaaaac gatcgccagc atcgcttcag cgatcggcac
    23341 tgcacggatc ccgacacagg gatcgtgacg acctttggtg atcatctcaa cttcttcgcc
    23401 aaagcggtta atagtgcgcc ccggcacggt aatgctggag gtcggtttca gcgccatatg
    23461 agcaatgatt tgctgcccgc tgctgatacc gccgagaatg ccgcccgcat ggttgctctg
    23521 gaaaccgtct ttggtgattt cgtcgcggtt ctggctgccg cgcagcgcca ctacgtcaaa
    23581 gccgtcgcca atttccacgc ctttcaccgc gttgatgctc atcagcgcat gggcgatgtc
    23641 ggcatccagg cggtcaaata ccggctcgcc aagtccggcg gggacgccac tggcaacaac
    23701 ggtgactttc gcgccgatgg agtcgccctc ttttttcagc gcgcgcatca gttcatctaa
    23761 cgcgtcgatt ttgtccggat ccgggcagaa gaacggattt tgttcaacca gcgaccagtc
    23821 tttgatttcc agcggaatgt cgcccatctg ggtcaagcag ccgcggattt caataccaaa
    23881 tttctcggcg agatattttt tggcaatcgc ccctgccgcc acgcgcatgg cggtttcgcg
    23941 ggcggaagaa cgtccaccgc cgcgataatc gcgcagaccg tatttttgtt cgtaggtgta
    24001 atcagcatgg cctgggcgga aaacgtcttt aattgcgctg taatcctgag agcgctggtc
    24061 agtgttttcg atcaacaagc caatgctggt gccagtagta acgccttcaa aaacaccaga
    24121 gagaattttg acctgatccg gctcgcggcg ctgggtggta tagcgcgatg tcccagggcg
    24181 acgacggtcg aggtcatgtt gcaggtccgc ttccgtcagc agaatgcctg gcggaacacc
    24241 atcgacgatg cagccgagcg ccagcccatg cgattcgccg aaggtggtta cgcgaaagag
    24301 ttgtccaatt gtgtttccag ccatcacggc tccgttattg ttgtgtttgc gtgtttactt
    24361 aatctttata aatcgcgaaa tattcacggg ccgccagcag ctgctctttg gtgagcataa
    24421 acacaccatc gccgccgtta tcaaactcca gccaggtgaa cggaacatcc ggatattgtt
    24481 ccataagatg taccatgctg ttgccgactt cacaaatcaa cacgccatca tcagcaaggt
    24541 aatctgccgc gtttccaaga atgcgacgcg tcagtttaag gccgtcggtg ccagatgcca
    24601 ggcccagttc cggctcgtga cggtattcgt ttggcaggtc ggacatatct tccgcgtcga
    24661 catacggcgg gttagtgaca atcagatcgt actgcacttt cggcaagtcg cggaacagat
    24721 cggaacgaat cggaatgacg ttgtggatca gaccgtgttc ttcgatgttc tgttcagcaa
    24781 ccgccagcgc gtcgggagag atatccaccg cgtcgacttc tgcatccggg aaggcataag
    24841 cacaggcaat ggcgatgcag ccgctaccgg tacacatatc taaaatatgc tgcggttgtt
    24901 tgctgatgag tccggcaaat ttattgttga tcagttcacc aatcggcgag cgcggcacca
    24961 gcacgcgttc atcgacgtaa aattcatgac cgcagaacca ggctttgttg gtcaggtaag
    25021 ccaccggaat gcgctcgttg acgcggcgga tcacgcgttc aacaatacga tgtttttcgc
    25081 tggaggtcag acgcgcggtg cgcatatctt ccgggatatc cagcggcagg tagagcgatg
    25141 gtaacaccag ctgtacggct tcatcccacg ggttatcggt gccgtgaccg taccagatat
    25201 ttgccgcgct gaagcggctc actgaccagc gcaacatgtc ctgaatggtt tgcagctcat
    25261 ttactgcttc atcaacgaaa attttatcca cgtattcctc cagggcatga tcgcaataat
    25321 ttcggcggct agtttgccat gaagatgacg ataaatcagc attcacgcgc ggtgagtgag
    25381 gaaaaatacg tttaaaacga tcgattgtgc tacgagtcgg gtaaactgta ggaaaattag
    25441 aaatagagac agataaatga aaaagaaaac aacacttagc gaggaggacc aggctctgtt
    25501 tcgccagttg atggcgggga ctcgcaagat taagcaggac acgattgtcc accgaccgca
    25561 gcgtaaaaaa atcagcgaag tgccggtgaa acgcttgatc caggagcagg ctgatgccag
    25621 ccattatttc tccgatgagt ttcagccgtt attaaatacc gaaggtccgg tgaaatatgt
    25681 tcgcccggat gtcagccatt tcgaggcgaa gaaactgcgc cgcggcgatt attcaccgga
    25741 attgtttttg gatttacacg gtctgacgca gctgcaggcc aagcaggaac tgggcgcgtt
    25801 gattgccgcc tgtcgccgcg aacatgtgtt ttgtgcctgc gtgatgcatg ggcacgggaa
    25861 gcatattttg aagcaacaaa caccgctgtg gctggcacaa catccgcatg tgatggcatt
    25921 tcaccaggca ccgaaagagt acggcggtga tgcggctttg ttggtgttga ttgaagtgga
    25981 agagtggttg ccgccggagt tgccctgagg agttgagcgt gttgtgccag gagcgcggaa
    26041 tggcaggggc gaatgaccct gccaggtgag aaaaggtgcg ctaatacata ttcagtatgt
    26101 aagtgaatcg gcaggtagaa tctatgggct gtcgagatgt cgtgtccacg cgtagcttca
    26161 tatcatgcag ttgcctggac gtaatcggtt gcggctcagg cgtcaccgtc actttggcat
    26221 tatcacagcc ggaagtcgag aaggtcatct gctgtgcgat aaaacggcag tagacaccac
    26281 gctcatcaaa attattcccg ttacacagtt tgccattttc catcaggaaa gtgggcagtg
    26341 tttgctcaat aacaccacct gttgactgca acctgacgac tttgttatgt acaacataat
    26401 tttcattcca ggaaacatca tacggtgcca ggggcaccgc cggacatgaa gaactcacct
    26461 tcgttgggcc aatatagtca ggaaaatcat catcatacgt tttagcgaag ggatctctac
    26521 tcttaacaaa cgacgacaca atccacggac aaccatgtaa attcccatcg taataaacaa
    26581 acatctttaa ttcattacat gtccatcccg ttttggtctg gctatcatac tgctctaatc
    26641 caggacaggc tgacatggat accctgctgt ccgaaatttt cgacatagat ggttgagtag
    26701 aactatcgcc agtccacgaa actaaatccg gctgtgaatt gggcatgaat gtagccttaa
    26761 atatagcgta attaactgaa tctggcgtcg ctataatcag atgaaactca aactc
//
LOCUS       DAJVUK010000043        25499 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.043, whole genome shotgun sequence.
ACCESSION   DAJVUK010000043 DAJVUK010000000
VERSION     DAJVUK010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25499
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.043"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..183
                     /locus_tag="OQQ57_001680"
     CDS             <1..183
                     /locus_tag="OQQ57_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HCS1956480.1"
                     /translation="ACMAITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPD
                     IGRQLSPDAWDDVSQE"
     gene            253..1029
                     /gene="yaaA"
                     /locus_tag="OQQ57_001681"
     CDS             253..1029
                     /gene="yaaA"
                     /locus_tag="OQQ57_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HCS1956481.1"
                     /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEASSSNGELVFKRYEQR"
     gene            complement(1182..1478)
                     /locus_tag="OQQ57_001682"
     CDS             complement(1182..1478)
                     /locus_tag="OQQ57_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HCS1956482.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGY
                     YWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
     gene            complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="OQQ57_001683"
     CDS             complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="OQQ57_001683"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HCS1956483.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="OQQ57_001684"
     CDS             complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="OQQ57_001684"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HCS1956484.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="OQQ57_001685"
     CDS             complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="OQQ57_001685"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HCS1956485.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTSGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
                     KVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     misc_feature    complement(6400..6519)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00506"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Thr leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00506"
     gene            complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="OQQ57_001686"
     CDS             complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="OQQ57_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HCS1956486.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(6734..7420)
                     /locus_tag="OQQ57_001687"
     CDS             complement(6734..7420)
                     /locus_tag="OQQ57_001687"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HCS1956487.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIKVFPTLVESLHDVDFTVATTARSRAKYHYYATPVELVLLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPTKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
     gene            complement(7820..7960)
                     /locus_tag="OQQ57_001688"
     CDS             complement(7820..7960)
                     /locus_tag="OQQ57_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956488.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            8056..8772
                     /gene="arcA"
                     /locus_tag="OQQ57_001689"
     CDS             8056..8772
                     /gene="arcA"
                     /locus_tag="OQQ57_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003621071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HCS1956489.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(8832..10184)
                     /gene="creD"
                     /locus_tag="OQQ57_001690"
     CDS             complement(8832..10184)
                     /gene="creD"
                     /locus_tag="OQQ57_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HCS1956490.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNIILGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLQLNMALNLSGTGDLSVVPAGRNS
                     EMPLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQLTDWATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDQLRIWK
                     "
     gene            complement(10242..11666)
                     /gene="creC"
                     /locus_tag="OQQ57_001691"
     CDS             complement(10242..11666)
                     /gene="creC"
                     /locus_tag="OQQ57_001691"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HCS1956491.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPELGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTVVDVAALF
                     RRVSEARTVQLAEKNITLHVMPTEVNVAAEPALLEQALGNLLDNAIDFTPESGRITLS
                     AEVDQEHVALKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(11666..12355)
                     /gene="creB"
                     /locus_tag="OQQ57_001692"
     CDS             complement(11666..12355)
                     /gene="creB"
                     /locus_tag="OQQ57_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HCS1956492.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QLVPDVMILDVGLPDISGFELCSQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLHAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(12368..12841)
                     /gene="creA"
                     /locus_tag="OQQ57_001693"
     CDS             complement(12368..12841)
                     /gene="creA"
                     /locus_tag="OQQ57_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HCS1956493.1"
                     /translation="MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
     gene            13052..13921
                     /gene="robA"
                     /locus_tag="OQQ57_001694"
     CDS             13052..13921
                     /gene="robA"
                     /locus_tag="OQQ57_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HCS1956494.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="OQQ57_001695"
     CDS             complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="OQQ57_001695"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HCS1956495.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAARRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            14617..15138
                     /gene="yjjX"
                     /locus_tag="OQQ57_001696"
     CDS             14617..15138
                     /gene="yjjX"
                     /locus_tag="OQQ57_001696"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/xanthosine triphosphatase"
                     /protein_id="HCS1956496.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSA
                     TLPLPAVILQKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="OQQ57_001697"
     CDS             complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="OQQ57_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HCS1956497.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="OQQ57_001698"
     CDS             complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="OQQ57_001698"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HCS1956498.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            17787..19454
                     /gene="ettA"
                     /locus_tag="OQQ57_001699"
     CDS             17787..19454
                     /gene="ettA"
                     /locus_tag="OQQ57_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017145039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HCS1956499.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(19761..20993)
                     /gene="nadR"
                     /locus_tag="OQQ57_001700"
     CDS             complement(19761..20993)
                     /gene="nadR"
                     /locus_tag="OQQ57_001700"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HCS1956500.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQR"
     gene            complement(21014..22396)
                     /gene="radA"
                     /locus_tag="OQQ57_001701"
     CDS             complement(21014..22396)
                     /gene="radA"
                     /locus_tag="OQQ57_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HCS1956501.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(22445..23413)
                     /gene="serB"
                     /locus_tag="OQQ57_001702"
     CDS             complement(22445..23413)
                     /gene="serB"
                     /locus_tag="OQQ57_001702"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HCS1956502.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK"
     gene            23519..24163
                     /locus_tag="OQQ57_001703"
     CDS             23519..24163
                     /locus_tag="OQQ57_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HCS1956503.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE"
     gene            24191..25207
                     /gene="lplA"
                     /locus_tag="OQQ57_001704"
     CDS             24191..25207
                     /gene="lplA"
                     /locus_tag="OQQ57_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HCS1956504.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEA
                     EIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIA
                     GAVR"
     gene            25239..25388
                     /locus_tag="OQQ57_001705"
     CDS             25239..25388
                     /locus_tag="OQQ57_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000566138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956505.1"
                     /translation="MIDLENQEREIINLMLSQRISWLAAVRIRHKLSLAEVSKMLGIS
                     INSLK"
BASE COUNT         6127 a         7029 c         6333 g         6010 t
ORIGIN      
        1 gcctgcatgg ctattaccaa tttgaccgcc attttactgc tctcgcctgt ggttcatacc
       61 attgccagtg attatctacg ccagcgtaaa ctcggcgtgc gcccggtgtt tgatccgttg
      121 cgttatccgg atatcggtcg ccagctttct ccggacgcgt gggatgatgt ttcgcaggag
      181 taatcacaac tatcgatcaa ctcattctct ttttttgcta aagtcggcat aaatttcctg
      241 caaggactgg atatgctgat tcttatttca cctgcgaaaa cgcttgatta ccaaagcccg
      301 ttgaccacca cgcgctatac gctgccggag ctgttagaca attcccagca gttgatccat
      361 gaagcgcgga aactgacgcc tccgcagatt agcacgctga tgcgcatcag cgacaaactg
      421 gcgggtatca acgccgctcg ctttcatgac tggcagccag atttcacgcc ggcgaatgcc
      481 cgccaggcga ttctggcgtt taaaggtgat gtctacaccg gcttgcaggc cgaaaccttc
      541 agcgaagacg atttcgattt tgcccaacag catttgcgaa tgctttccgg cttgtatggc
      601 gtactgcgcc cgctcgattt aatgcagcct tatcgtctgg aaatggggat ccgtcttgag
      661 aatgcccgag ggaaagatct gtatcaattc tggggagata tcatcaccaa caagctgaac
      721 gaggcgctcg cagcacaagg cgataatgtg gtgattaatc tggcgtcaga tgagtatttt
      781 aaatcggtga agccgaagaa attgaatgcc gagattatca agccggtgtt cctcgatgag
      841 aagaacggca aatttaagat catcagcttc tacgctaaga aagcacgcgg tctgatgagt
      901 cgtttcatta ttgaaaatcg gctgaccaaa ccagagcaac tgactggttt taatagcgaa
      961 ggttacttct ttgatgaagc ttcctccagc aatggcgaac tggtgtttaa acgctacgag
     1021 cagcgttaag tttgcagtca atgccggatg cggcgtgaac gccttatccg gcctacaaaa
     1081 gcatgcagat tcaatatatt gcagaattca cgtaggcctg ataagacgcg ccagcgtcgc
     1141 atcaggcgct gaatgccgga ttgttacccg gcatttgtca tttagcggtg atgtttgcct
     1201 ggaccatgac cgccgtgatg atcatgagga gctttcttat ggtggcgcgg cggtggcggc
     1261 ggtccgtgtg ggtgccagcg attgcctcgc cattcataat gttgtttcca ccagccgtgg
     1321 tcgcgccagt gacctccatc ccagtaatag ccacgattat cacgattgcc tatctgtaat
     1381 tttactgacg ggactaacgt aatttccgca gcctgtgctg ccatgggagc gaccagaacc
     1441 agggaaagtg cgagtacgat agattgcatc tttttcacag gttactcctt ttatcattgc
     1501 ccgttatggg tcgatatccg gagattacgc gatgagaacg acggttgtta ttctccgcaa
     1561 tcctaatctc taagttaccg catttattga gaatatctcc tttttccctg tcgtttttct
     1621 ccataatttc ttcataaaaa agccgggctg cataaaagca aacccggcct gattgagata
     1681 atgaatagat tttactgatg attcatcatc aatttacgca acgcagcaaa atcggcgggc
     1741 agattatgtg aaagcaaggg taaatcagca cgttctgcca gctcttttgg cagatccaac
     1801 gtttcaccga gaatcgcttc cacgctctct ttaaatttcg ccggatgcgc ggtgccgagg
     1861 aacaagccat attcgcctgg attcaactgg tcacgcagcg cacgatacgc tacggcagcg
     1921 tgcggctccg aggtgtagcc cagttctttt aactcacgca ttgtctgttg cgtggtttca
     1981 tcatccacgg ctgcataacc cagctctttc agttgccaga ttttgcggcg gaacaactct
     2041 tccacacgcg gccagttgtt cggctgactc acgtccatcg cgttggataa cgtcgcctga
     2101 gtcgctttgg gtgaccactg accgtcgtgc aggaaacgtg gcacggtatc gttcacgttg
     2161 gtcgcagcaa taaaacgttt caccggcaga ccgagtgact tcgccagcag acccgccgtc
     2221 aaatcgccga agtttccgct tggcaccgag acaaccagct ggttgcgcgc ttcctgcggc
     2281 agctgcgcaa ctgcttcaaa gtagtagcaa atctgcgcca gcaaacggct gatgttaatc
     2341 gagttagctg agtttaaccc cagcgccact ttcagctctt catcatcaaa cgcctgcttc
     2401 accagcgcct gacaggcatc gaaatcgccg tcgatggcaa cagtttcgat attgccgccc
     2461 aatgtacaga acagtttttc ttgcagtgga ctgattttgc ctcgtggata gaggataacc
     2521 actttcacat tcggtaaacc gtagaaagca tgagccactg ccgctccggt atcaccggag
     2581 gtcgcggtca gaatggtcac tggcttatcg cccgcaatat gggtcagcat ttgtgccata
     2641 aagcgaccgc cgaaatcttt aaatgccagc gttggcccgt ggaacaattc cagacaaccg
     2701 acatcgcttt caacattggc gaccggagcc gggaaggcaa acgccgcgcg cacgcgctct
     2761 tccaggattt cctgcgggat ttcatcacca ataaacgccg agaggatctt cgcactgcgg
     2821 gtgacaaaat ccagcttcag catctcatca atttcagtca ggctgaattc cggcaggtcg
     2881 tgcggaaaaa acagcccctg atttttgccc aacccctggg ttacggcttg cgcaaagctg
     2941 acctgctcat tgtgatcttt cagattgtag agtttcattt agttttccag tactcgtgcg
     3001 cccgccgtat ccagccggca aatatgaaca aaaccttcct gattttgcag gtagttctta
     3061 cccaaccagt cggcaacgcg ctgggcggta tccggcttgt cacacagagc gaacaaggtc
     3121 gggccggagc cggagatacc gctcgctacc gcgccgattt ccgcaaccgc ctgccgcgcc
     3181 tgccggaagc caggcagtaa ccgttcacgg tagggttcag cgataacatc tttcatcagc
     3241 ttcgcggcaa gctcaggctg acgggaatag caggcgtgaa tgaagccagc cagatgtcgc
     3301 ccgtgcgcaa tgcaatcctg gcggcgatac tgcgccggta aaatagccct ggcttctgcc
     3361 gttgagactt taatccccgg atacgccagc acccacagcc actcatcaaa ccctggcact
     3421 tgctggctga tgatgtcgtt ttcttcgatc atcaactgca taccaccaag aaaacacggt
     3481 gccacgttgt cgtaatgaat gctgccggag attcgtcctt ccagctcgcc catcaaagcc
     3541 agcaaacgag tgtcattaag cggcttgcca cagtgttcat tcatcgccat cagcgccgcg
     3601 accaccgaac aggcgctgga gcctaagccc gaaccgattg gcatattctt ttccagagtc
     3661 atcgccactg gaatttgctt gccaagctcc tggcaaaaac gctcccagca ctgataaacg
     3721 atattttccc gtggttctga cggcagctta tcggcaaagc gtccgaggtt gttgagactg
     3781 aatgtctctg ccgcctcaac cgtgactaca tctccgagca atgcaccatc aacaggtgtc
     3841 accgccgccc cgagcacatc aaacccgacg ctcatattgg cactggaagc cggggcataa
     3901 actttaacca tgtcagactc ctaacttcca tgagagggta cgtagcagat cggcaaagac
     3961 accggcagct gtaacgtcat tgcccgcacc atatccgcgc agcaccaacg gcagcggctg
     4021 ataatagtgg ctataaaagg ccagggcgtt ttcgccattt ttcactttga acagcggatc
     4081 attaccatcc acttcggcaa tcttcacgcg gcaggcacca tcttcatcaa tattgccaac
     4141 atagcgcaaa acttttcctt catcacgggc cttcgccacg cgcgcggcaa agagatcgtc
     4201 gagctgtgac agattcgcca taaaagcggc aacatcaccc tcagcgttaa actctgcggg
     4261 cagcacaggt tcaatttcaa tatccgccag ctccagttca cgtcccgttt cacgagcgag
     4321 aatcaatagc ttacgcgcta catccatacc agaaagatca tctcgcggat ccggttcggt
     4381 ataacccatt tcccgcgcca gagtagtcgc ctcggagaaa ctcatgcctt cgtctaactt
     4441 gccgaagata taagaaagcg aacctgaaag aatgccggag aacttcatca attcatcacc
     4501 agcattgagc agattttgca ggttctcaat aaccggtaat ccagccccaa cgttggtgtc
     4561 atagaggaat ttacgccgcg atttttccgc cgcatgacgc aacagatggt agtaatccat
     4621 cgacgaggtg ttggcctttt tgttcggcgt gacaacgtgg aaaccttcgc gcaagaagtc
     4681 ggcatattga tccgccactg cctggctgga ggtgcagtca acaatgaccg ggttcagcag
     4741 atgatattct ttcacgaggc gaattaagcg cccgagatta aacggctctt tggcttgcgc
     4801 cagttcttcc tgccagtttt ccagatttag gccatgcaca ttggtgagca gtgccttcga
     4861 gttggcaaca ccgcagacac gtaagtcgat atgtttattc ttcagccagc tttgttgacg
     4921 cttcagttgc tccagcagcg caccgccaac gccaccgacg ccaatcacaa acacttcgat
     4981 aacctgatcg gtattgaaca gcatctgatg agtaacgcgc acgccagtgg tcgcatcatc
     5041 gttatttacc acgacagaga ttgagcgttc agaagatccc tgagcaatgg cgacaatgtt
     5101 gatattggcg cgggccagcg cggcaaagaa tttcgccgag atcccacgca aggtgcgcat
     5161 accatcacct accaccgaga taatggccag ccgttccgtc accgccagcg gctccagtaa
     5221 gccttctttc agttccaggt agaactcttc ctgcattgcc cgttcagctc gcacacagtc
     5281 gctttgtgga acgcagaaac tgatactgta ttcggaagat gattgcgtaa tcagcaccac
     5341 ggaaatacgg gcgcgtgaca ttgcagcaaa gacgcgcgcc gccatgccga ccattccttt
     5401 catccccgga ccagaaacgc tgaacattgc catattattc agattggaaa tgcctttgac
     5461 cggtaattcg tcttcatcac ggctggcacc aatgagcgta cctggtgctt gaggatttcc
     5521 ggtattttta atcaggcaag ggatctggaa ctgggcgatg ggggtaatgg tgcgggggtg
     5581 aagaacttta gcgccgaagt aggaaagctc catcgcttcc tggtaggaca tcgacttcaa
     5641 caacctcgca tcgggcacct gacgcgggtc gcaggtatag accccgtcaa cgtccgtcca
     5701 aatctcgcaa caatcggcgc gtaaacaggc agccagcacc gccgcggagt agtcggaacc
     5761 gttacgtcca agtaccacca gttcgccttt ttcattaccg gaggtgaaac ctgccatcaa
     5821 caccatgtga tcagccggaa tgcggcttgc cgcaatacgg cgggtggact cagcaatatc
     5881 gacggtagat tcgaggtaat gccccactgc cagcagtttt tcgaccggat cgataacggt
     5941 aacgttgtga ccacgagctt ctaacacgcc ggccataatg gcgatcgaca ttttctcgcc
     6001 acggcaaatc agcgcagcgt tgatgctatc cgggcactgc cccaacaaac taatgccatg
     6061 caggacatgt tttatttggg caaattcctg atcgacgaaa gttttcaatt gcgccagcgg
     6121 gaaccccggc tgggcggcgg cgagtcccgt caaaagttcg gcaaaaatac gttcggcatc
     6181 gctgatattg ggtaaagcat cctggccgct aatggttttt tcaatcatcg ccaccaggtg
     6241 gttggtgatt ttggcggggg cagagaggac ggtggccacc tgcccctgcc tggcattgct
     6301 ttccagaata tcggcaacac gcagaaaacg ttctgcattt gccactgatg taccgccgaa
     6361 cttcaacact cgcatggttg ttacctcgtt acctttggtc gaaaaaaagc ccgcactgtc
     6421 aggtgcgggc ttttttctgt gtttcctgta cgcgtcagcc cgcaccgtta cctgtggtaa
     6481 tggtgatggt ggtggtaatg gtggtgctaa tgcgtttcat ggatgttgtg tactctgtaa
     6541 tttttatctg tctgtgcgct atgcctatat tggttaaagt atttagtgac ctaagtcaat
     6601 aaaattttaa tttactcacg gcaggtaacc agttcagaaa ctgctatcag acactctttt
     6661 tttaatccac acagagacat attgcccgtt gcagtcagaa tgaaaagctg aaaaatactt
     6721 actaaggcgt tttttatttg gtgatatttt tttcaatatc atgcagcaaa cggtgcaaca
     6781 ttgccgtgtc tcgttgctct aaaagcccca ggcgttgttg taaccagtcg accagtttta
     6841 tgtcatctgc cactgccaga gtcgtcagca atgccatgac tcgttcgcgt aaagcttgca
     6901 gttgatgttg gtctgccgtt gtgtcacttt tcgtcggttg ttgtattaat gttgctaatt
     6961 gatagcaata gaccatcacc gcctgcccca gattgagcga aggataatcc gccaccatcg
     7021 gcacaccagt aagaacgtca gccaacgcta actcttcgtt agtcagcccg gaatcttcgc
     7081 gaccaaacac cagcgcggca tggctcatcc atgaagattt ttcctctaac agcagcacca
     7141 gttctactgg cgtggcgtag taatgatatt tcgcccgact gcgcgcagtg gtggcgacag
     7201 tgaaatcgac atcgtgtaac gattcaacca gtgtcgggaa aactttaata ttatcaataa
     7261 tatcaccaga tccatgtgcg acccagcgag tggctggctc cagatgtgcc tgactatcga
     7321 caatccgcag ttcgctaaaa cccatcgttt tcattgcccg cgccgctgcc ccaatatttt
     7381 ctgctctggc gggtgcgacc agaataatcg ttatacgcat attgccactc ttcttgacca
     7441 aatgaccgcg aacagggtga tcactgtcaa cttattacac ggtgcgaatt tacaaatcct
     7501 taacgtaagt cgcagaaaaa gccctttact tatcttaagt aaggctaaac tatttcctga
     7561 ctgtactaac ggttgaattg ttaaaaaatg ctacatatcc ttctgtttac ttaggataat
     7621 tttataaaaa ataaatctcg acaattggat tcaccacgtt tattagttgt atgatgcaac
     7681 tagttggatt attaaaataa tgtgacgaaa gctagcattt agatacgatg atttcatcaa
     7741 actgttaacg tgctacaatt gaacttgata tatgtcaacg aagcgtagtt ttattgggtg
     7801 tccggcccct cttagcctgt tatgttgctg ttaaaatggt taggatgaca gccgtttttg
     7861 acactgtcgg gtcctgaggg aaagtaccca cgaccaagct aatgatgttg ttgacgttga
     7921 tggaaagtgc atcaagaacg caattacgta ctttagtcat gttacgccga tcatgttaat
     7981 ttgcagcatg catcaggcag gtcagggact tttgtacttc ctgtttcgat ttagttggca
     8041 atttaggtag caaacatgca gaccccgcac attcttatcg ttgaagacga gttggtaaca
     8101 cgcaacacgt tgaaaagtat tttcgaagcg gaaggctatg atgttttcga agcgacagat
     8161 ggcgcggaaa tgcatcagat cctctctgaa tatgacatca acctggtgat catggatatc
     8221 aatctgccgg gtaagaacgg tcttctgtta gcgcgtgaac tgcgcgagca ggcgaatgtt
     8281 gcgttgatgt tcctgactgg ccgtgacaac gaagtcgata aaattctcgg cctcgaaatc
     8341 ggtgcagatg actacatcac caaaccgttc aacccgcgtg aactgacgat tcgtgcacgc
     8401 aacctgctgt cccgtaccat gaatctgggt actgtcagcg aagaacgtcg tagcgttgaa
     8461 agctacaagt tcaatggttg ggaactggac atcaacagcc gttcgttgat cggccctgat
     8521 ggcgagcagt acaagctgcc gcgcagcgag ttccgcgcca tgcttcactt ctgtgaaaac
     8581 ccaggcaaaa ttcagtctcg tgctgaactg ctgaagaaaa tgaccggccg tgagctgaaa
     8641 ccacacgacc gtactgtaga cgtgacgatc cgccgtattc gtaaacattt cgaatctacg
     8701 ccggatacgc cggaaatcat cgccaccatc cacggtgaag gttatcgctt ctgtggtgat
     8761 ctggaagatt aatcggcttt accaccgtca aaaaaaacgg cgctttttag cgccgttttt
     8821 atttttcaac cttatttcca gatacgtaat tgatcgtcca ttgtaacttc tttactggct
     8881 ttcattttcg gcagtgaaaa cgcataccag tcgatattac gagtcacaaa catcatgccg
     8941 gccagcgcca ccaccagcac actggttccc aacaacagcg cgctatcggc agagttgagc
     9001 agtccccaca tcacaccatc cagcaacaac agcgcgaggg taaacaacat gctgttgcgc
     9061 cagcctttca ataccgcctg caaataaata ccgttcatta acgccccaat cagactggcg
     9121 attatccatg ccacggtaaa accgatatgt tcagaaagcg ccagcaagag caaataaaac
     9181 atcaccaatg aaagccccac cagcaaatat tgcattgggt gtaaacgttg cgcggtgagc
     9241 gtttcaaaaa caaagaacgc cataaaagtc agtgcaatca gcagaatggc gtacttagtc
     9301 gcccagtccg ttaattggta ttgatcggct ggcgtcgtca ctgcgacgct aaacgcgggg
     9361 aagttttccc agccggtatc attgcctgaa gcaaaacgct caccgagatt attagcaaac
     9421 cagctgcttt gccattgcgc ctgaaaacct gactcgctaa cttcccgttt ggctggtaga
     9481 aaatcaccta aaaaactggg atgcggccag ttgctggtta agggcatttc gctattacgc
     9541 ccggcaggca ccacagaaag atcgccggta ccgcttaaat tcagtgccat attcagctgc
     9601 aggttctgct tccgccagtc cccttcgggt aaagggatat gcacgccctg cccgccttgc
     9661 tctaacccgg taccgggttc aatggtcagt gccgttccgt taacttcagg cgctttcacc
     9721 acaccaatac cacgcgcatc cccgacgcta atcacaataa agggcttgcc taagatgata
     9781 tttggcgcgt tgagctcgct aagacgcgaa acatcgaaat cggcttttag cgttaaatca
     9841 ctgtgccaga cctgaccggt ataaatccct atcttgcgtt cttccacgtt ctgattgcca
     9901 tcaaccatca atgactcagg taaccaaaaa tggataaaac ttcgtttccg ctccacggtt
     9961 ttatcctctt cctgcaccgt ataaagctcg gtcacaggaa tagcgataag cggcccaacg
    10021 agtttttgcg gcccgctggt actttggcga atcgcatctt ccacatcgct acggtaatcg
    10081 gcacgttcga caatcacttg ccgaatcagc attatcggaa tcaacaacag caatactgca
    10141 ccaaacaagg tggtcatttt ccagaacagg ggggatttca acatagtctt ctcctttgca
    10201 atggcagcag gatacgaagg ctatgtggga agaatttgaa gctatgtgaa gtgacggtga
    10261 agtcgaagcg aggccagcac gccaccttcc tgcacgttgc gcagcgtgac ttcgccgtta
    10321 aacaaacggg cgacctcact gacgaacgcc aaccccagac cgctgctttt ttgcccattt
    10381 gcacgcggca aagagtaaaa gcgttcaaaa atacgtgaca gcgcgtagtc aggaatacca
    10441 ctaccggtat ccagcacctt aagggcgacg tgttcctgat ccacttcggc gcttagcgtt
    10501 atgcgaccgc tctcgggggt aaaatcgatg gcgttatcca gtaaattccc cagcgcctgc
    10561 tccagtaacg ccggttcagc agcaacatta acctcagtgg gcataacatg tagagtgatg
    10621 tttttttctg ccaactgcac ggtgcgcgct tcgctgacgc ggcgaaataa tgccgccaca
    10681 tcaacaacag tcagaacgac ttcctgacga ttctccagtc ttgcctggcg tagtaacgtt
    10741 tctaccaatg cctgcatacg cgcattttgc gtcagaatgt tgtcggtaaa acgagccacc
    10801 acttccggtg gcggaccttc gcgtaaaatt tccgccgcgc cacgaatcgc cgccagtggg
    10861 ctttttagct catgggttaa cgcataaaca tactgctcaa tatagttttt cccttccagc
    10921 ttcacgcgca tactttccag cgcctgcgca agcttacgca actcgctact gccgagttca
    10981 ggaagaggaa cgggcttatt gtcagtgacg gaatcggcat agcgagtgag ccgggcaatg
    11041 gagcggttga tccaccaaac catgcctgcg ccaatcacca gtgcaatccc cagcaaaatg
    11101 gcgctggccc ataaaattcg ccgctcgcta cgcttaatga ccggagccat cgccgcgttc
    11161 ggtttgccta cgctcaaaac gccaataagc cgcgagccgt ccataatcgg cgcggcaaca
    11221 tacatcaccg aactttcggg atcggcagga ttttgcaacg tgctgcgcgc accatactga
    11281 ccacgcaacg ttagccagac gtcattccag cgcgaataat cctgcccaac ggctttattt
    11341 gccgaatcga acaatacttt accctgcgaa tcggtcatat agacatgata ttcattgcgc
    11401 actttgttaa tgccaccgat attggcgcga aacggacgat gttgtagctg attaaacgcc
    11461 tgcgccagtt gcccatgcgt tgggtcccca gagagcaaat cgggacgcgc cagctccgcc
    11521 agcaacgttg cggtgtcgat caacgtcccc tccgttgctc ttcgcacgcc cggtttaact
    11581 tctttgacaa aaatagccag tacgaaccag gccgccaccg ccaccagtaa aaaatagccc
    11641 agcagcaacc gcatgccgat acgcattaca ggcccctcag gctatatccc atgccgcgat
    11701 gagtattaat cggtgaaaga tcggggttga tggcacgcag cttggcatgc aacgttttaa
    11761 tgtgggtatc aacggtgcga tcgtaggtgt cctgcgcatc ttcccacacg ctatccatca
    11821 gttgctggcg ggaccagacg cggcctggcg acttgagtaa cgtcttcagc aataaaaact
    11881 cataccgcgt cagcgttaat ggcgtgtcaa accagctgat ctgcgccgcg ggttcattca
    11941 attcaaaatg accaatacgg atgacgggag acggcgacga gaacttcttc acccgacgca
    12001 gtaaggtgcg caccctggcg cacacttcgc ggggtgaaaa cggtttagcc acatagtcgt
    12061 cagcgccaat ttccagccca agcaggcgat cgacctcttc acttcgggcc gtcaggaaca
    12121 gtacaggtaa cgccggatgg agcgccagta actggctgca caattcaaag ccgctgatat
    12181 caggcaaacc aacgtcgaga atcatgacgt cgggaaccag ctggcgagct ttatccagca
    12241 ccggcaagcc tcgctcaaag acctcgacgg caaaaccttc ctgctgcaac atgtagacca
    12301 gcgtgtcggc tatcccttgc tcatcttcca ctaaccagac cgtttcccgt tgtataaatc
    12361 gcctctgtta ttgccgccac ggcatgacag gaaccgcgct aatcgcgttt ttcggcgaac
    12421 cttctacaac tttgtcggag taagccagat aagcgagcgc gttgcgtttg gcgtcataaa
    12481 agcgcacgac ctgtaacgac ttaaagacca gggacgtgcg ttttttgaat actacctcgc
    12541 cctgagcttt gccgttttta atacgatccg acagttcaat cggcccgact tgctgacaag
    12601 aaatagccgc atcggaggta tcttccgcca gacccaatcc ccctttaata ccacctgttt
    12661 tcgcccggct cacataacag gtgacatttt tcacatcggg atcgtcaaag gcttccacaa
    12721 caattttgtg atccgggccg atcattttaa atacggtgtc gaccgaacca atctcttctg
    12781 catgagccaa tggccccagc attatcaggc ttaaagacag gatcaaatgc ttgtatttca
    12841 tattgttacc atttttatct attacacgag caattagttc gtcacggtaa ataacatatt
    12901 gattaagaac aaaatctcaa ttcttttatt tccgtcaagc cctaaaacat actctactaa
    12961 gaaaaaaaca ctgaatgcta aaacagcaaa aaatgctatt atccaattac ctgatgtcag
    13021 gtgctcgttg ttgaaaggat gaggatattt tatggatcag gccggcatta ttcgcgacct
    13081 tttaatctgg ctggaaggtc atctggatca gcccctgtcg ctcgacaatg tagcggcgaa
    13141 agcaggttat tccaagtggc acttacagag aatgtttaaa gatgtcactg gccatgctat
    13201 tggcgcgtat attcgtgctc gtcgtttgtc gaaatcggcg gtcgcactac gcctgactgc
    13261 gcgtccgatt ctggacatcg cgctgcaata ccgcttcgac tctcaacaga catttacccg
    13321 cgcattcaag aagcagtttg cccagactcc tgcactttac cgccgttctc ctgaatggag
    13381 cgcctttggt attcgcccgc cgctacgtct gggtgaattc acaatgccag agcacaaatt
    13441 tgtcaccctg gaagatacgc cgctgattgg tgttacccag agctactcct gttcgctgga
    13501 gcaaatctct gatttccgcc atgaaatgcg ttatcagttc tggcacgatt ttctcggcaa
    13561 cgcgccgacc attccgccag tgctctacgg cctgaatgaa acgcgtccga gtcaggataa
    13621 agacgacgaa caagaggtat tctataccac cgcgttagcc caggatcagg cagatggcta
    13681 tgtactgacg gggcatccgg tgatgctgca gggcggcgaa tatgtgatgt ttacctatga
    13741 aggtctggga accggcgtgc aggagtttat cctgacggta tacggaacgt gcatgccaat
    13801 gctcaacctg acgcgccgta aaggtcagga tattgagcga tactacccgg cagaagacgc
    13861 caaagcggga gatcgcccaa ttaatctgcg ctgtgaactg ctgattccta tccgccgtta
    13921 acgctgcagc tcatctaatg caggggcgtc cagatgcgag atgtcccctg cggtttcaac
    13981 gacccagcca gacgccagcc acaggctttc ctgataatcc acgcgcgaaa tagaacagtt
    14041 acgcagacgt aagcggcgcg ctgcccatgc tggtaatccg agaatcgtac tcaccagaca
    14101 tcccagtgca ataccatggc tcaccagcag cggtcggctt ccctgcggta agtcccggca
    14161 agattccagt gccgcattga cgcgatcgct gagctcctgc attgactcgc cttcaggaat
    14221 acgcccgtca acggtgccat tgaccagctg ccgacgccag ttctcttctt cttcggtcag
    14281 agaatcgata tgtctttttt ccagcacacc catgtttaat tcacgcaggc gagaatcaaa
    14341 gatgatgtca cagccgcagg cctgggcgat gatttccgcc gtacgccggg tgcgtcctaa
    14401 atcgctactg ataatatgcg taatgccaag ctctttggca cgggttgcca cctgcatcgc
    14461 ctgttgctca cctttggcgg tcagcgggct gtcagactgg ccctgaatac gtcgctcggc
    14521 gttccactgc gtttcaccgt ggcggactag gtatacctgt aacatgcttt ttttccgtat
    14581 actgctgtaa cgttaatttt ctgagtaatg ctgattatgc accaagttgt ctgtgcgacc
    14641 accaatcccg ctaaaattca ggccattctg caggcatttc acgagatctt cggcgaagga
    14701 tcctgccata ttgcatccgt tgccgtcgag agcggtgtac cggaacagcc ctttggcagt
    14761 gaggaaacgc gcgctggcgc acgaaatcgg gtagcaaatg cccgccgttt acttccagag
    14821 gctgattttt gggtggcgat tgaagctggc atcgatggtg acagcacttt cagttgggtg
    14881 gtgattgaaa acaccagcca gcgcggcgag gcgcgttcgg ctactttgcc gttacctgcg
    14941 gtgattctgc agaaagtgcg tgaaggtgag gcgcttggtc ccgtgatgtc gcgttatacc
    15001 ggtattgatg agattggtcg taaggaaggg gcgatcggcg tgtttaccgc cgggaaactc
    15061 actcgcgcca gcgtctatca ccaggcggtg atcctggcgc tgagtccgtt tcacaatgcc
    15121 gtgtatcagg cattgtagga cggataaggc gttcacgccg catccggcat tcggtgcacg
    15181 atgcctgatg cgacgctgcc gcgtcttatc aggcctacaa aatcaatcgc ttttcagcaa
    15241 cacctcttcc agccactggc gcagctccac gggcgcggct ttcaggctgt tagatccacg
    15301 cgtaatcgtc gcgatgcccg cgccgagttc attttttaac tcacgctgac tcatttcgcc
    15361 acgcaacagc tcttcgacaa tacgcacgcg agtccccaac gcttcgcgct catctggcgt
    15421 cagcatcagg tttaacaacg gtaaatggag atcgttttgg taggcattct taagcaggtc
    15481 gacaaaacgt aaccactcct ggtgacgctg ttctgccatc gctgctgaat agggtgattg
    15541 ttgggccata atatgtcgcc attgttagcg ggggaagcaa aatgcctccc ccggttgtac
    15601 tcgctaaaga gtacgatagc atatcataaa cgtgcggatc agtaacgacg tccccattcc
    15661 gtggcgctca tcaacgtcgg tttatccccc atgaaataac ggtagtaagc gtcataagcc
    15721 agcacgttct tcacataacc gcgcgtctcg gagaacggaa tactctcgac aaatgccaca
    15781 gcgtcgatac gcccggcgct gttgccaagc caggttcgca cccgtccagg tccggcgtta
    15841 taagctgctg aggagaaaat acggttattg ccaaactgct gataaacata ttgcaggtaa
    15901 ctggtgccaa tgttgatatt cgtttccgga tccagcaatt gcccagggct gctataacca
    15961 ggaatagaga acatcttcac cgtatgggtc gctgtaccag gcataatctg catcaggccg
    16021 ctggccccta ccggtgattt cactttcgga ttccaggcgc tctcctgacg ggcaatcgcc
    16081 atcgcatagc tttgcgggat ctctttccca ctggtgtaac gtttgaaaag atcgttgtaa
    16141 gccagcggga atcgctcttc cagatgatcc caaagcttcc cggcgatcgt tgcctgaacg
    16201 ctaagatccc accattggtt attgaaagca taccgagcca gttgagcctg ctctgttttt
    16261 gacttgctct tcaccagatt ggcccactcg ctacgcgcgg tgttatcgag attccagtac
    16321 atcaactcgc gcacgcgcgc catctccggc ccctgagtca gggcgctgtc aacattctgc
    16381 ggcgctttat caatcttcag ctcatactct tctccgatgc gttgtgctgc aaccatcggg
    16441 tagaaaccac gctgttgcat gagttgatgc aaaatctctt tcgcttcagc ttcacgtccg
    16501 cgttccagca ataaatccgc ctgccagtaa cgccattcat ctttctcttt tgcttccatc
    16561 ggcagacgcg ccagccaggt attcaggccg cgacgatcgc cggtgccaag tgccattcgc
    16621 acacggcgtt caatcaacga cgtggattgc gagcgcataa tggcgtcatc gcgccatttc
    16681 gcctgctcgt cggtgacatc gttgcccatc aaacgccagg cgacgatatc gcgcagctcc
    16741 tgaatctgat cttcattaag ctgctgcgcc tgggcaagcg acgggatcat cagccgtgca
    16801 ttttcagcat cctgccgcgc cacactggca aacgccaccg ctgccatttg acgggtaaaa
    16861 tcggtcgctc cggttgtacg cgcgaaggtc agtaccgtat tagggttgtt cgccagtgaa
    16921 atgattgccg aggcgatagt ctggtaatcg gcaggcatct gccctgccag cactgttacc
    16981 aggccagtgt tacccgcttt catcgccaga cggatacgct ctaaatacgc cagcggatct
    17041 tgtttacctg acgcacgcca gacgctaaat aacttgtcac aggcgttagg ctggctcttg
    17101 ccggttagcc acagctcttt cgccccttgc caggcttctt cactctgccc ggtgttccat
    17161 ttcgcatagt agtaattaca ttgcgcttcg gtagttccgg gcttttccgg gctaaaggct
    17221 aacaagccac gccagtcttc acgccgcgcc agttcattga cgaaacgaga ttgcagcgtg
    17281 cgagcgggag gaagcgtggg gttagcgcga acaaagttag tgaccgtcac cgccggttga
    17341 ttcatcagat catcggtgat ctggcggtat tccaggtagg gataaagcgg ataatccttc
    17401 agtccaggca tcatttgttc gaccacatcc atttgtcgat tatcccaggc ctgcttgatt
    17461 tgcgcgtaac ggctacgctg ctcatccagt gagtcggctc gcgccacgct gctgaccgtc
    17521 agcagacaga caccggcagc caacagccgc caggtaactt gtttggcttt ttccacaagc
    17581 gcatcctcta agtgtaaata catcaatgca gcgtcatgcc gcgtaataga tttatgctaa
    17641 ccagtcattg ccgtttacgc cacgttacgg acactttttt acttttactg cgaaggtgat
    17701 cgaccaactg ggattaggcg gggaaaaagg ctacacttcg cctttgaaaa ctcatcatca
    17761 cgataaacat agaggcgaag tccaacgtgg ctcaattcgt ttataccatg catcgtgtcg
    17821 gcaaagttgt tccgccgaaa cgtcatattt tgaaaaacat ctctctgagt ttcttccctg
    17881 gggcaaaaat tggtgtcctg ggtctgaacg gcgcgggtaa gtctaccctg ctgcgcatta
    17941 tggcaggcat tgataaagac atcgaaggtg aagcgcgtcc gcagccagac atcaagattg
    18001 gttacctgcc gcaggaaccg cagctgaacc cggaacacac cgtgcgtgag tccattgaag
    18061 aagcggtttc tgaagtggtt aacgccctga aacgcctgga tgaagtgtat gcgctgtacg
    18121 ccgatccgga tgccgatttt gacaagctgg ccgctgaaca aggccgtctg gaagagatca
    18181 ttcaggctca cgacggtcat aacctgaacg tacagctgga gcgtgcggcg gatgcgctac
    18241 gtctgccgga ctgggacgcg aaaatcgcta acctctccgg tggtgagcgt cgtcgcgtag
    18301 cgttgtgccg cctgctgctg gaaaaaccag acatgctgct gctcgacgaa ccgaccaacc
    18361 acctggatgc cgaatccgtg gcctggctgg aacgcttcct gcacgacttc gagggcaccg
    18421 tggtggcgat tacccacgac cgttacttcc tcgataacgt tgcaggctgg atcctcgaac
    18481 ttgaccgcgg tgaaggtatt ccgtgggaag gcaactactc ctcctggcta gagcagaaag
    18541 atcagcgcct ggcgcaggaa gcttcacaag aagcggcgcg tcgtaagtcg atcgagaaag
    18601 agctggagtg ggtacgtcag ggaactaaag gccgccagtc gaaaggtaaa gcacgtctgg
    18661 cacgctttga agagctgaac agcaccgaat atcagaaacg taacgaaacc aacgaactgt
    18721 ttattccacc tggaccgcgt ctgggcgata aagtgctgga agtcagcaac ctgcgtaaat
    18781 cctacggtga tcgcctgctg attgatgacc tgagcttctc gatcccgaaa ggggcaatcg
    18841 tcgggatcat cggtccgaac ggcgcgggta aatcgaccct gttccgtatg atctctggtc
    18901 aggaacagcc ggacagcggc accatcactt taggtgaaac ggtgaaactg gcatcggttg
    18961 atcagttccg tgactcaatg gataacagca aaaccgtttg ggaagaagtt tccggcgggc
    19021 tggatattat gaagatcggc aacaccgaga tgccaagccg cgcctacgtt ggccgcttta
    19081 actttaaagg ggttgatcag ggtaaacgcg ttggtgaact ttccggtggt gagcgcggtc
    19141 gtctgcatct ggcgaagctg ctgcaggttg gcggcaacat gctgctgctc gacgaaccaa
    19201 ccaacgacct ggatatcgaa accctgcgcg cgctggaaaa cgccctgctg gagttcccgg
    19261 gctgtgcgat ggttatctcg cacgaccgtt ggttcctcga ccgtatcgcc acgcacatcc
    19321 tggactacca ggatgaaggt aaagttgagt tcttcgaagg taactttact gagtacgaag
    19381 agtacaagaa acgcacgctg ggcgcagacg cactggagcc gaagcgtatc aagtacaagc
    19441 gtattgcgaa gtaatgcgta aaatgccgga tgcggcgtga acgccttatc cggcctacaa
    19501 accaagaaat ttcaatacgt tgtgaatctc caggcctgat aagacgcggt aagcgtcgca
    19561 tcaggcattg agcaccgaat gccggatacg gcgtgaacgc cttttccggc ctacaatagc
    19621 cttagtatcc gcaatttcgt agcgggtcac ccgtgctgat tcttttaaac cttgtttaat
    19681 ctcgacagcc tcttccagag aggttttcaa ctcatcaaaa aacttatttt atacctcgcc
    19741 tttgagccgt ttcatcgcgg ttatctctgc tcccccatca tctcccgcac cagctccacg
    19801 cagcgcagga aacggctgtc ataatcgtcc tcttcaaccc gcacgaattc gatattgttc
    19861 tcttccagca tctccaccag caagttctgg aactctttgc gatccaccga actgccgagg
    19921 ctgcgtaaac catccgccac ccacggcgtg ttgttctcca gcaggatcac cagatcgaaa
    19981 cggtattcat caatcaacgc ctgtacgaac ggatgctcac gcccttcgta ctttttgcag
    20041 aacgcctggg tagtgacaaa atcagtgtca ataaacgcca ctttattggc atatttcact
    20101 gcaaaatcaa tgtattgtgc gtggcccagc gcgattttat cgtaatcgga atactgcaat
    20161 gcgatctcat caccgccgag gtgtgaaaag acataatcgc gaccatattc ccacgcactg
    20221 gtggtattga agatattggc aagtttgttt accagggtgg atttaccgct cgactcgcca
    20281 ccaaggatcg ccacggtacg tacaaagaac ggcttcactt ccgtaggaat atattcccag
    20341 tagcggaacg ggttttcgcg gatctgcgca ccgctgatac tcataaaggt acgtttcgga
    20401 tcgaccagca ccgtatcgat ccccagatgt tccatatact gtggcgcatc ggcttcttcc
    20461 gaggtgtaga tcaggtccgg ctgaatcccc ttttcagcca taaacttttt gatgccgttg
    20521 ctccacacat cccagccgtg cggatacggc tccatgccct cctcgttgaa agcatgaatg
    20581 cgaatatttt tctgatattt aaaagtttgt aataaccagc gcagacgatc cggcaccgtg
    20641 ggctgctgcg acatggcgct gtcttcaaac aacgcgcggt cgcgggtatc gtcaaaaccc
    20701 ataatgatat gcagctcgtc aacctggcta caggcgcgct ggataaggta gatatgtccg
    20761 gtatgcagcg ggtagaactt accgaatacg acaccaatgg ttttcttctg tcggggaaat
    20821 tcaagcccca aaaaacggtg caacgcctcc agcttttgcg cgctggggct tttaattttg
    20881 gcattcagta actggcttaa ataccctttg gtcataccgc tggcatcagc tacctgctgt
    20941 agcgtgcagc cctgttgctt gatggcagtt ttcaggtaat caaatgacga catatctccc
    21001 tccgtatctc tcattataag tcgtcgaaca cgctaagcgc gtcggagagt tttttaacgc
    21061 caaaaatctg catcccttcc ggcgcttttt tcggtacgtt agccgccgga acaatcgccc
    21121 ggcgaaaacc gtgtttcgcc gcttctgaaa ttcgttcctg accgctgggc accgggcgga
    21181 tctcccctgc cagcccgact tcaccaaaca ccaccagatc ctgtggcagc ggtctgtcac
    21241 gcaggctgga aaccatcgcc agcagtaacg ctaaatcggc actggtttcg gttaccttca
    21301 cgccgccgac cacgttcaca aatacatcct gatcggccat ttgcagacca ccgtgacggt
    21361 gcaagacagc cagcaggatt gccagacggt tttgttccag ccccactgcc acgcggcgcg
    21421 gattcgccat catcgagtga tcgaccagcg cctgaatctc caccagcaac ggacgcgttc
    21481 cttcccacac caccatcacg gagctgccgg aggtcacttc atctccgcga cttaagaaaa
    21541 ttgccgaagg gttgctgact tcacgcagcc cctgttcggt catcgcgaag acgcccagct
    21601 cattcaccgc gccgaagcgg tttttatggc tgcgcaaggt gcgaaaacgg gagtcggcat
    21661 caccatccag aagcaccgaa cagtcgatac agtgttccag cactttaggg ccagccagcg
    21721 agccatcttt ggttacgtgc ccaaccatga caatcgccac accgcgcgtt ttggcgaagc
    21781 gcgtcagata agccgccgtt tcacgcacct gcgccacgct accaggcgat gattgtacat
    21841 ccgccatatg catcacctgg atcgagtcaa ttaccatcag tttcggttgc tcttcttcgg
    21901 caatcaggca gatctgttcg atgctggttt ccgacaacat attgagattg tcagtcggca
    21961 ggccaaggcg atgagcgcgc attgccacct gttgcagcga ctcttcgcca gtgacataca
    22021 gcgttttcat ctgctgggcc agtttgcaca gcgtttgcag tagcagcgtg gatttccccg
    22081 cacctgggtt accgccaatc agaatggcgc ttcccggcac cacgccgccg cctagtacgc
    22141 ggtcgaactc tttaaatccg gtggaaaaac gcggcagctc ttcaaggctg atatcggaga
    22201 gtttctggac ttttgccacc ccggcgctac cggcatagcc gctgagacgc tcgttacgcg
    22261 ccaccgttgg cgacgcagca agacgcacct cggtgatggt gttccaggca tgacaggcac
    22321 tgcactgccc ctgccagcgc ggataatcgg ccccgcattc attacaaaca aaggcgcgtt
    22381 ttggagcttt tgccacggtg tacctcgtta atgctgtgcc gcccgcagga tggcgggcga
    22441 gcaattactt ctgattcagg ctgccagaga ggatgcagaa tacccccatc aggtcagcgt
    22501 gacggatggt gacttccgcc ttttcattca cttttggctt ggcatggtag gcaatcccca
    22561 gccctgctgc tttgatcatc ggcaggtcat tagctccatc gccaatcgcc acggtctgcg
    22621 ccagcgggat ttcatactcc tgcgcgaggc gagtcaaagt tttcgctttg tactgcgcgt
    22681 ctacgatgtc gccgatcaca ttgccggtaa atttaccgtc catgatctcc agttcattgg
    22741 ctaccacggc ggtcaggcgc agcttgtcgc gcagatattc agcaaagaaa gtaaagccgc
    22801 cggaggcaat cgccactttc cagcccagcg tttccagctt gagcaccagt tgcgttaagc
    22861 ctggcatcag cggcagattt tcacgcacct gttgcagaat attggcgtca gcgcctttca
    22921 gcgtcgccac acggctgcgc aggctggcgg taaaatcgag ttcgccgcgc atcgcccgtt
    22981 cggttacttc cgccaccatc tcgcccgttc cggccagttt ggcaatttca tcaatacatt
    23041 caatctggat ggcggtggaa tccatgtcca tcaccagcaa acccggcgtg cgcaggtgcg
    23101 ggattttccc cagcggggcg acatccagtt gcgcttcatg ggccaggcgc gtagcccgtg
    23161 cggtgagtga acctgccaga cgaatcacct gataatcttc cacgcaccag gcggcaacaa
    23221 tcaccatcgc cgcacccagt ttgctctggt attgggtcag acgctgttta tccagcccac
    23281 gaccatacag cagccagccg ctacgacctg cgtggtaatc cagtggcatc acttcatcac
    23341 cacttaatga aagaggcaga ccaggccata aagagacatc ttcaggcagg tcgcaccagg
    23401 taatgttagg cattaaggat cctgtaaaat cgttcgaagc agggaaaata acgcatgagg
    23461 ctaccttgta tccattgctt ctggcaacat taagtctcaa attttcaaag ggtggaagat
    23521 ggctcgcaca aaactgaaat tccggctgca tcgggcagtg attgtcctgt tctgtcttgc
    23581 cttgttagtg gcgctgatgc agggagcgtc atggtttagt caaaaccacc agcgacaacg
    23641 taatccacag ctggaagaac tggcccgcac cctggcgcgt caggtaacgc tgaacgttgc
    23701 accgctgatg cgtaccgact caccggatga aaaacgcatt caggcgatcc tcgatcagtt
    23761 aacggatgaa agccgtatcc tcgacgcggg tgtgtatgac gaacaaggcg atcttatcgc
    23821 acgttctggc gaaagcgtcg aagtgcgcga ccggctggcg ctcgacggta aaaaagcggg
    23881 cggctatttt aaccagcaga ttgtcgaacc aattgccggg aaaaacggac cgctcggcta
    23941 tctgcgcctg acgctcgaca cccatacgct cgccaccgaa gcccaacagg tggataacac
    24001 cactaacatt ttacgcctga tgttgctgct ttcactggca atcggcgtag tgctgacccg
    24061 cacgctgcta cagggtaaac gtacccgctg gcagcaatcg cccttcctgt taaccgccag
    24121 caaaccggtg ccggaagagg aagaaagcga gaaaaaagag tgacccatta ctacaagaaa
    24181 ggaaatcgtt atgtccacat tacgcctgct catctctgac tcttacgacc cgtggtttaa
    24241 cctggcggtg gaggagtgta tttttcgcca gatgcccgcc acgcagcgcg ttctgtttct
    24301 ctggcgcaat gccgacacgg tagtgattgg tcgcgcgcag aacccgtgga aagagtgtaa
    24361 tacccggcgg atggaagaag ataacgtccg cctggcacgg cgcagtagcg gtggcggcgc
    24421 ggtgttccac gatctcggca atacctgctt tacctttatg gctggcaagc cggagtacga
    24481 taaaaccatc tccacgtcga ttgtgctcaa tgcgctgaac gcgcttggcg tcagcgccga
    24541 agcgtccggg cgtaacgatc tggtggtgaa aaccgccgaa ggcgaccgca aagtctcagg
    24601 atcggcctat cgcgaaacca aagatcgtgg cttccaccac ggcaccttgc tgctcaatgc
    24661 cgaccttagc cgcctggcaa actatctcaa tccggataaa aagaaactgg cggcgaaagg
    24721 cattacctca gtgcgttccc gcgtgaccaa cctcaccgag ctgctgccgg ggatcaccca
    24781 tgagcaggtt tgcgaggcca taaccaaggc ctttttcgcc cattatggcg agcgtgtaga
    24841 agcggaaatc atctccccgg acaaaacgcc agacttgcca aacttcgccg aaatctttgc
    24901 ccgtcagagt agctgggaat ggaacttcgg tcaggctccg gcattctcgc atctgctgga
    24961 tgaacgcttt agctggggcg gcgtggaact gcatttcgac gttgaaaaag gccatatcac
    25021 ccgcgcccag gtgtttaccg acagcctcaa ccccgcgccg ctggaagccc tcgccgggcg
    25081 actgcaaggc tgcctgtacc gcgcggatat gctgcaacaa gagtgcgaag cgctgttggt
    25141 tgacttcccg gaccaggaaa aagagctacg ggagttgtcg acgtggatag cgggggcggt
    25201 aaggtaactc gctgattaaa ataccaaagg aagggaatat gatcgatctg gaaaaccagg
    25261 agcgggagat tatcaattta atgttaagcc agcgtatttc ctggctagcc gccgtgcgta
    25321 tcaggcataa attatcgctt gctgaagtaa gtaaaatgtt aggtatctcg attaattctc
    25381 taaaatagat cgaaaagacg gaacggttta gctcaaacat caaaagcaaa atggcagaaa
    25441 tttatggttg tccaccagag ttgctgatat gcccttcctg gatgacggct gaacataaa
//
LOCUS       DAJVUK010000044        25242 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.044, whole genome shotgun sequence.
ACCESSION   DAJVUK010000044 DAJVUK010000000
VERSION     DAJVUK010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25242
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.044"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..403)
                     /locus_tag="OQQ57_001706"
     CDS             complement(<1..403)
                     /locus_tag="OQQ57_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HCS1956506.1"
                     /translation="MDTTLPFLILYACLSALLFFWDAKHGLLPDRFTCPLLWSGLLFY
                     QVCHPDGLADALWGTIVGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHSWAFL
                     PRLVFLAASFACGAVVIGLLMRGKESLKNPLP"
     gene            782..1093
                     /gene="rpsJ"
                     /locus_tag="OQQ57_001707"
     CDS             782..1093
                     /gene="rpsJ"
                     /locus_tag="OQQ57_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HCS1956507.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            1126..1755
                     /gene="rplC"
                     /locus_tag="OQQ57_001708"
     CDS             1126..1755
                     /gene="rplC"
                     /locus_tag="OQQ57_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HCS1956508.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            1766..2371
                     /gene="rplD"
                     /locus_tag="OQQ57_001709"
     CDS             1766..2371
                     /gene="rplD"
                     /locus_tag="OQQ57_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HCS1956509.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            2368..2670
                     /gene="rplW"
                     /locus_tag="OQQ57_001710"
     CDS             2368..2670
                     /gene="rplW"
                     /locus_tag="OQQ57_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HCS1956510.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            2688..3509
                     /gene="rplB"
                     /locus_tag="OQQ57_001711"
     CDS             2688..3509
                     /gene="rplB"
                     /locus_tag="OQQ57_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HCS1956511.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            3526..3804
                     /gene="rpsS"
                     /locus_tag="OQQ57_001712"
     CDS             3526..3804
                     /gene="rpsS"
                     /locus_tag="OQQ57_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HCS1956512.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            3819..4151
                     /gene="rplV"
                     /locus_tag="OQQ57_001713"
     CDS             3819..4151
                     /gene="rplV"
                     /locus_tag="OQQ57_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HCS1956513.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            4169..4870
                     /gene="rpsC"
                     /locus_tag="OQQ57_001714"
     CDS             4169..4870
                     /gene="rpsC"
                     /locus_tag="OQQ57_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HCS1956514.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            4883..5293
                     /gene="rplP"
                     /locus_tag="OQQ57_001715"
     CDS             4883..5293
                     /gene="rplP"
                     /locus_tag="OQQ57_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HCS1956515.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            5293..5484
                     /gene="rpmC"
                     /locus_tag="OQQ57_001716"
     CDS             5293..5484
                     /gene="rpmC"
                     /locus_tag="OQQ57_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HCS1956516.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            5484..5738
                     /gene="rpsQ"
                     /locus_tag="OQQ57_001717"
     CDS             5484..5738
                     /gene="rpsQ"
                     /locus_tag="OQQ57_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HCS1956517.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            5903..6274
                     /gene="rplN"
                     /locus_tag="OQQ57_001718"
     CDS             5903..6274
                     /gene="rplN"
                     /locus_tag="OQQ57_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015817037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HCS1956518.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            6285..6599
                     /gene="rplX"
                     /locus_tag="OQQ57_001719"
     CDS             6285..6599
                     /gene="rplX"
                     /locus_tag="OQQ57_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HCS1956519.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            6614..7153
                     /gene="rplE"
                     /locus_tag="OQQ57_001720"
     CDS             6614..7153
                     /gene="rplE"
                     /locus_tag="OQQ57_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HCS1956520.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            7168..7473
                     /gene="rpsN"
                     /locus_tag="OQQ57_001721"
     CDS             7168..7473
                     /gene="rpsN"
                     /locus_tag="OQQ57_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HCS1956521.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            7507..7899
                     /gene="rpsH"
                     /locus_tag="OQQ57_001722"
     CDS             7507..7899
                     /gene="rpsH"
                     /locus_tag="OQQ57_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HCS1956522.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            7912..8445
                     /gene="rplF"
                     /locus_tag="OQQ57_001723"
     CDS             7912..8445
                     /gene="rplF"
                     /locus_tag="OQQ57_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HCS1956523.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRIKEAKKK"
     gene            8455..8808
                     /gene="rplR"
                     /locus_tag="OQQ57_001724"
     CDS             8455..8808
                     /gene="rplR"
                     /locus_tag="OQQ57_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HCS1956524.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            8823..9326
                     /gene="rpsE"
                     /locus_tag="OQQ57_001725"
     CDS             8823..9326
                     /gene="rpsE"
                     /locus_tag="OQQ57_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HCS1956525.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            9330..9509
                     /gene="rpmD"
                     /locus_tag="OQQ57_001726"
     CDS             9330..9509
                     /gene="rpmD"
                     /locus_tag="OQQ57_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HCS1956526.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            9513..9947
                     /gene="rplO"
                     /locus_tag="OQQ57_001727"
     CDS             9513..9947
                     /gene="rplO"
                     /locus_tag="OQQ57_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HCS1956527.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            9955..11286
                     /gene="secY"
                     /locus_tag="OQQ57_001728"
     CDS             9955..11286
                     /gene="secY"
                     /locus_tag="OQQ57_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HCS1956528.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            11318..11434
                     /gene="rpmJ"
                     /locus_tag="OQQ57_001729"
     CDS             11318..11434
                     /gene="rpmJ"
                     /locus_tag="OQQ57_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HCS1956529.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            11581..11937
                     /gene="rpsM"
                     /locus_tag="OQQ57_001730"
     CDS             11581..11937
                     /gene="rpsM"
                     /locus_tag="OQQ57_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HCS1956530.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            11954..12343
                     /gene="rpsK"
                     /locus_tag="OQQ57_001731"
     CDS             11954..12343
                     /gene="rpsK"
                     /locus_tag="OQQ57_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HCS1956531.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            12377..12997
                     /gene="rpsD"
                     /locus_tag="OQQ57_001732"
     CDS             12377..12997
                     /gene="rpsD"
                     /locus_tag="OQQ57_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HCS1956532.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            13023..14012
                     /gene="rpoA"
                     /locus_tag="OQQ57_001733"
     CDS             13023..14012
                     /gene="rpoA"
                     /locus_tag="OQQ57_001733"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HCS1956533.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            14053..14436
                     /gene="rplQ"
                     /locus_tag="OQQ57_001734"
     CDS             14053..14436
                     /gene="rplQ"
                     /locus_tag="OQQ57_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HCS1956534.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            14543..14911
                     /locus_tag="OQQ57_001735"
     CDS             14543..14911
                     /locus_tag="OQQ57_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HCS1956535.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILRGIRHDDPQYQEVSRRLSLLELKLRQAGF
                     STDFLRGDYADKLLDKINDN"
     gene            14922..15347
                     /gene="zntR"
                     /locus_tag="OQQ57_001736"
     CDS             14922..15347
                     /gene="zntR"
                     /locus_tag="OQQ57_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HCS1956536.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            15403..15621
                     /gene="arfA"
                     /locus_tag="OQQ57_001737"
     CDS             15403..15621
                     /gene="arfA"
                     /locus_tag="OQQ57_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor ArfA"
                     /protein_id="HCS1956537.1"
                     /translation="MSRYQHTKGQIRDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK
                     HGNRGNWEASGKKVNHFFTTGLLLSGAC"
     gene            complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="OQQ57_001738"
     CDS             complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="OQQ57_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HCS1956538.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLAEIRDLLKEQNNRS"
     gene            complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="OQQ57_001739"
     CDS             complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="OQQ57_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HCS1956539.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="OQQ57_001740"
     CDS             complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="OQQ57_001740"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HCS1956540.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAKFNASDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK"
     gene            complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="OQQ57_001741"
     CDS             complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="OQQ57_001741"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HCS1956541.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
                     LSAAQLERYIRAFNPWPMSWLEIERQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLA"
     gene            complement(19853..20362)
                     /gene="def"
                     /locus_tag="OQQ57_001742"
     CDS             complement(19853..20362)
                     /gene="def"
                     /locus_tag="OQQ57_001742"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HCS1956542.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            20492..21616
                     /gene="dprA"
                     /locus_tag="OQQ57_001743"
     CDS             20492..21616
                     /gene="dprA"
                     /locus_tag="OQQ57_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HCS1956543.1"
                     /translation="MVDTDIWLRLMSISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL
                     YALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLATSLLEHGGALVSEFPLDVSPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            21588..22061
                     /locus_tag="OQQ57_001744"
     CDS             21588..22061
                     /locus_tag="OQQ57_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HCS1956544.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNAL
                     LWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEI
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            22090..22632
                     /locus_tag="OQQ57_001745"
     CDS             22090..22632
                     /locus_tag="OQQ57_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HCS1956545.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            22637..23209
                     /gene="tsaC"
                     /locus_tag="OQQ57_001746"
     CDS             22637..23209
                     /gene="tsaC"
                     /locus_tag="OQQ57_001746"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HCS1956546.1"
                     /translation="MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVLGETGGRLNPSEIRDALTGELFRQG"
     gene            23214..24032
                     /gene="aroE"
                     /locus_tag="OQQ57_001747"
     CDS             23214..24032
                     /gene="aroE"
                     /locus_tag="OQQ57_001747"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HCS1956547.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLQGDNTD
                     GIGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHLGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            24029..24286
                     /locus_tag="OQQ57_001748"
     CDS             24029..24286
                     /locus_tag="OQQ57_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HCS1956548.1"
                     /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
                     TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP"
     gene            complement(24262..24816)
                     /locus_tag="OQQ57_001749"
     CDS             complement(24262..24816)
                     /locus_tag="OQQ57_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HCS1956549.1"
                     /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGGVRLADDVGIWPLVV
                     IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG
                     LRYSANNYVKWKDEYLDQGNQTQP"
BASE COUNT         6457 a         5996 c         6569 g         6220 t
ORIGIN      
        1 aaggcagcgg gttttttaat gattcttttc ctctcatgag cagaccaata actacggctc
       61 cgcaagcgaa tgaggcagca aggaaaacca gtcgtggtaa gaaggcccat gaatgccagg
      121 cgccaagggc ggcgagaaac ttcacatcac catagcctaa tccttcttta tgtcgcagta
      181 tgcgataccc ccagtaaatg acagcgaatg tgccgtaacc aacaattgtc ccccataacg
      241 catcggctaa accatcagga tgacaaactt gatagaacaa aagacctgac cagagtaacg
      301 ggcacgtaaa tctgtcaggt aacaagccat gctttgcatc ccagaaaaaa agtagggctg
      361 ataaacaagc gtacaaaatc agaaagggaa gggtagtgtc cataaaacat cctctgtaat
      421 tggagtatca ccatcgaata actccggatg ctcagcaaca gagagagcgc tgatttgtta
      481 acctgattcc ggtgaaaaac gctatcttca caaccttaca aatttcgtgg aatgcagctc
      541 gcaatctgcg cgttgcgatt aatttctacc cgatgcttgc gtcaggctca gatttgcgta
      601 taatgcgcgg gcttgtcgta gttgacagca ggttcaatct gaacctcagt tagccgaatt
      661 tggctaccta acaatgctcc caatcgggga gctacgtaag aacggttaca ctctcccatc
      721 aatcgtaatg ggtctgagga gtaatcattt tcgtttataa aataattgga gctctggtct
      781 catgcagaac caaagaatcc gtatccgcct gaaagcgttt gatcatcgtc tgatcgatca
      841 agcaaccgcg gaaatcgtcg agactgccaa gcgcactggt gcgcaggtcc gtggtccgat
      901 cccgctgccg acacgcaaag agcgcttcac tgttctgatc tccccgcacg tcaacaaaga
      961 cgcgcgcgat cagtacgaaa tccgtactca cttgcgtctg gttgacatcg ttgagccaac
     1021 cgagaaaacc gttgatgctc tgatgcgtct ggatctggct gccggtgtag acgtgcagat
     1081 cagcctgggt taatcaggtc attgagcgat tgagaggttg aaacaatgat tggtttagtc
     1141 ggtaaaaaag tgggtatgac ccgtatcttc acagaagacg gcgtttctat cccagtaacc
     1201 gtaatcgaag ttgaagcaaa ccgcgttact caggttaaag acctggctaa cgatggctac
     1261 cgtgctattc aggtgaccac cggtgctaaa aaagctaacc gtgtgaccaa gcctgaagct
     1321 ggccacttcg ctaaagctgg cgtagaagct ggccgtggtc tgtgggaatt ccgcctggct
     1381 gaaggcgaag agttcactgt aggtcagagc attagcgttg aactgtttgc tgacgttaaa
     1441 aaagttgacg taactggcac ctctaaaggt aaaggtttcg caggtaccgt taagcgctgg
     1501 aacttccgta cccaggacgc tactcacggt aactccttgt ctcaccgcgt tccgggttct
     1561 atcggtcaga accagactcc gggcaaagtg ttcaaaggca agaaaatggc aggtcagatg
     1621 ggtaacgaac gtgtaaccgt tcagagcctt gacgtagtac gcgttgacgc tgagcgcaac
     1681 ctgctgctgg ttaaaggtgc tgtcccgggt gcaaccggta gcgacctgat cgttaaacca
     1741 gctgtgaagg cgtaaggaga tagcaatgga attagtattg aaagacgcgc agagcgcgct
     1801 gactgtttcc gaaactacct tcggtcgtga tttcaacgaa gcgctggttc accaggttgt
     1861 tgttgcttat gcagctggtg ctcgtcaggg tactcgtgct cagaagactc gtgctgaagt
     1921 aactggttcc ggtaaaaaac cgtggcgcca gaaaggcacc ggccgtgcgc gttctggttc
     1981 tatcaagagc ccgatctggc gttctggtgg cgtgaccttt gctgctcgtc cgcaggacca
     2041 cagtcaaaaa gttaacaaga agatgtaccg cggcgcgctg aaaagcatcc tgtccgaact
     2101 ggtacgtcag gatcgtctga tcgttgtcga gaagttctct gtagaagcgc cgaaaactaa
     2161 gctgctggca cagaaactga aagacatggc tctggaagat gtgctgatca tcaccggtga
     2221 gctggacgaa aacctgttcc tggctgcgcg caacctgcac aaggttgacg tacgcgatgc
     2281 aactggtatc gacccggtta gcctgatcgc cttcgacaaa gtcgtaatga ctgctgatgc
     2341 tgttaagcaa gttgaggaga tgctggcatg attcgtgaag aacgtctgct gaaggtgctg
     2401 cgtgcaccgc acgtttctga aaaagcgtct actgcgatgg aaaaatccaa caccatcgta
     2461 ctcaaagttg ctaaagacgc gaccaaagca gaaatcaaag ctgctgtgca gaaactgttt
     2521 gaagtcgaag tcgaagtcgt taacaccctg gtagttaaag ggaaagttaa acgtcacgga
     2581 cagcgtatcg gtcgtcgtag cgactggaaa aaagcttacg tcaccctgaa agaaggccag
     2641 aatctggact tcgttggcgg cgctgagtaa gtcggaggag taatacaatg gcagttgtta
     2701 aatgtaaacc gacatctccg ggtcgtcgcc acgtagttaa agtggttaac cctgagctgc
     2761 acaagggcaa accttttgct ccgttgctgg aaaaaaacag caaatccggt ggtcgtaaca
     2821 acaatggccg tatcaccact cgtcatatcg gtggtggcca caagcaggct taccgtattg
     2881 ttgacttcaa acgcaacaaa gacggtatcc cggcagttgt tgaacgtctt gagtacgatc
     2941 cgaaccgttc cgcgaacatc gcgctggttc tgtacaaaga cggtgaacgc cgttacatcc
     3001 tggcccctaa aggcctgaaa gctggcgacc agattcagtc tggcgttgat gctgcaatca
     3061 aaccaggtaa caccctgccg atgcgcaaca tcccggttgg ttctactgtt cataacgtag
     3121 aaatgaaacc aggtaaaggc ggtcagctgg cacgttccgc tggtacttac gttcagatcg
     3181 ttgctcgtga tggtgcttat gtcaccctgc gtctgcgttc tggtgaaatg cgtaaagtag
     3241 aagcagactg ccgtgcaact ctgggcgaag ttggcaatgc tgagcatatg ctgcgcgttc
     3301 tgggtaaagc aggtgctgca cgctggcgtg gtgttcgtcc gaccgttcgc ggtaccgcga
     3361 tgaacccggt agaccaccca catggtggtg gtgaaggtcg taactttggt aagcacccgg
     3421 taactccgtg gggcgttcag accaaaggta agaagacccg cagcaacaag cgtactgata
     3481 aattcatcgt acgtcgccgt agcaaataat tttagaggat aagccatgcc acgttctctc
     3541 aagaaaggtc cttttattga cctgcacttg ctgaagaagg tagagaaagc ggtggaaagc
     3601 ggagacaaga agcccctgcg cacttggtcc cgtcgttcaa cgatctttcc taacatgatc
     3661 ggtttgacca tcgctgtcca taatggtcgt cagcacgttc cggtatttgt aaccgacgaa
     3721 atggtcggtc acaaactggg tgaattcgca ccgactcgta cttatcgcgg ccacgctgct
     3781 gataaaaaag cgaagaagaa ataaggtagg aggaagagat ggaaactatc gctaaacatc
     3841 gccatgctcg ttcttctgct cagaaggttc gccttgttgc tgacctgatt cgcggtaaga
     3901 aagtgtcgca ggctctggat attttgacct acaccaacaa gaaagcggct gtactggtca
     3961 agaaagttct ggaatctgcc attgctaacg ctgaacacaa cgatggcgct gacattgacg
     4021 atctgaaagt tacgaaaatt ttcgtagacg aaggcccgag catgaagcgc attatgccgc
     4081 gtgcaaaagg tcgtgcagat cgcatcctga agcgcaccag ccacatcact gtggttgtgt
     4141 ccgatcgctg agactctgga gactagcaat gggtcagaaa gtacatccta atggtattcg
     4201 cctgggtatt gtaaaaccat ggaactctac ctggtttgcg aacaccaaag aattcgctga
     4261 caacctggac agcgatttta aagtacgtca gtacctgact aaggaactgg ctaaagcgtc
     4321 cgtatctcgt atcgttatcg agcgtccggc taagagcatc cgtgtaacca ttcacactgc
     4381 tcgcccgggt atcgttatcg gtaaaaaagg tgaagacgta gaaaaactgc gtaaggtcgt
     4441 agcggacatc gctggcgttc ctgcacagat caacatcgcc gaagttcgta agcctgaact
     4501 ggacgcaaaa ctggttgctg acagcatcac ttctcagctg gaacgtcgcg ttatgttccg
     4561 tcgtgctatg aagcgtgctg tacagaacgc aatgcgtctg ggcgctaaag gtattaaagt
     4621 tgaagttagc ggccgtctgg gcggcgcgga aatcgcacgt accgaatggt accgcgaagg
     4681 tcgcgtaccg ctgcacactc tgcgtgctga catcgactac aacacctctg aagcgcacac
     4741 cacttacggt gtaatcggcg ttaaagtgtg gatcttcaaa ggcgagatcc tgggtggtat
     4801 ggctgctgtt gaacaaccgg aaaaaccggc tgctcagcct aaaaagcagc agcgtaaagg
     4861 ccgtaaataa ggagcgtcgc tgatgttaca accaaagcgt acaaaattcc gtaaaatgca
     4921 caaaggccgt aaccgcggtc tggcgcaggg tacggatgtt agcttcggca gcttcggtct
     4981 gaaagctgtt ggccgtggtc gtctgactgc ccgtcagatc gaagcagcac gtcgtgctat
     5041 gacccgtgca gttaagcgtc aaggtaagat ctggatccgt gtgttcccgg acaaaccgat
     5101 cactgaaaag ccgctggcag tgcgtatggg taaaggtaaa ggtaacgtgg agtattgggt
     5161 tgccttgatt cagccgggta aagtcctgta tgaaatggac ggtgttccgg aagagctggc
     5221 ccgtgaagca ttcaagctgg cagcagcgaa actgccgatt aaaaccacct ttgtaactaa
     5281 gacggtgatg taatgaaagc aaaagagctg cgtgagaaga gcgttgaaga gctgaacacc
     5341 gagctgctga acctgctgcg tgagcagttc aacctgcgta tgcaggctgc aagtggccag
     5401 ctgcaacagt ctcacctgtt gaagcaagtg cgtcgcgatg tcgcacgcgt taagacttta
     5461 ctgaacgaga aggctggtgc gtaatgaccg ataaaatccg tactctgcaa ggtcgcgttg
     5521 ttagcgacaa aatggagaaa tccattgttg ttgctatcga acgttttgtg aaacacccga
     5581 tctacggtaa attcatcaag cgtacgacca aactgcacgt acatgacgag aacaacgaat
     5641 gcggtatcgg tgacgtggtt gaaatccgcg aatgccgtcc gctgtccaag actaaatcct
     5701 ggacgctggt tcgcgttgta gagaaagcgg ttctgtaata cagtacactc tctcgatacg
     5761 aataaacggc tcagaaatga gccgtttatt ttttctaccc atatccttga agcggtgtta
     5821 taatgccgcg ccctcgatat ggggattttt aacgacctga ttttcgggtc tcagtagtag
     5881 ttgacattag cggagcacta aaatgatcca agaacagact atgctgaacg tcgccgacaa
     5941 ctccggtgca cgtcgcgtaa tgtgtatcaa ggttctgggt ggctcgcacc gtcgctacgc
     6001 aggcgtaggc gacatcatca agatcaccat caaagaagca attccgcgtg gtaaggtcaa
     6061 aaaaggtgat gtgctgaagg cggtagtggt gcgcaccaag aagggtgttc gtcgcccgga
     6121 cggttctgtc attcgcttcg atggtaatgc ttgtgttctt ctgaacaaca acagcgagca
     6181 gcctatcggt acgcgtattt ttgggccggt aactcgtgag cttcgtagtg agaagttcat
     6241 gaaaattatc tctctggcac cagaagtact ctaaggagcg aatcatggca gcgaaaatcc
     6301 gtcgtgatga cgaagttatc gtgttaaccg gtaaagataa aggtaaacgc ggtaaagtta
     6361 agaatgtcct gtcttccggc aaggtcattg ttgaaggtat caacctggtt aagaaacatc
     6421 agaagccggt tccggccctg aaccaaccgg gtggcatcgt tgaaaaagaa gccgctattc
     6481 aggtttccaa cgtagcaatc ttcaatgcgg caaccggcaa ggctgaccgt gtaggcttta
     6541 gattcgaaga cggcaaaaaa gtccgtttct tcaagtctaa cagcgaaact atcaagtaat
     6601 ttggagtagt acgatggcga aactgcatga ttactacaaa gacgaagtag ttaaaaaact
     6661 catgactgag tttaactaca attctgtcat gcaagtccct cgggtcgaga agatcaccct
     6721 gaacatgggt gttggtgaag cgatcgctga caaaaaactg ctggataacg cagcagcaga
     6781 cctggcagca atctccggtc aaaaaccgct gatcaccaaa gcacgcaaat ctgttgcagg
     6841 cttcaaaatc cgtcagggct atccgatcgg ctgtaaagta actctgcgtg gcgaacgcat
     6901 gtgggagttc tttgagcgcc tgatcactat tgctgtacct cgtatccgtg acttccgtgg
     6961 cctgtccgct aagtctttcg acggtcgtgg taactacagc atgggtgtcc gtgagcagat
     7021 catcttccca gaaatcgact acgataaagt cgaccgcgtt cgtggtttgg atattaccat
     7081 taccactact gcgaaatctg acgaagaagg ccgcgctctg ctggctgcct ttgacttccc
     7141 gttccgcaag taaggtaggg ttactaaatg gctaagcaat caatgaaagc acgcgaagta
     7201 aaacgcgtag ctttagctga taaatacttc gcgaaacgcg ctgaactgaa agcgatcatc
     7261 tctgatgtga acgcttccga cgaagatcgt tggaacgctg ttctcaagct gcagactctg
     7321 ccgcgtgatt ccagcccgtc tcgtcagcgt aaccgctgcc gtcaaacagg tcgtccgcat
     7381 ggtttcctgc ggaagttcgg gttgagccgt attaaggtcc gtgaagccgc tatgcgcggt
     7441 gaaatcccgg gtctgaaaaa ggctagctgg taattgtcac caattgaatc acgggagtaa
     7501 agacagatga gcatgcaaga tccgatcgcg gatatgctga cccgtatccg taacggtcag
     7561 gccgcgaaca aagctgcggt caccatgcct tcctccaagc tgaaagtggc aatcgccaac
     7621 gtgctgaagg aagaaggttt tattgaagat tttaaagttg aaggcgacac caagcctgaa
     7681 ctggaactta ctctgaagta tttccagggc aaagctgttg tagaaagcat tcagcgtgtc
     7741 agccgcccag gtctgcgcat ctataaacgt aaagatgagc tgccgaaagt tatggcgggt
     7801 ctgggtatcg cagttgtttc tacctctaaa ggtgttatga ctgatcgtgc agcgcgccag
     7861 gctggtcttg gtggcgaaat tatctgctac gtagcctaat cggaggaaaa aatgtctcgt
     7921 gttgctaaag caccggtcgt tgttcctgcc ggcgttgacg taaaaatcaa cggtcaggtt
     7981 attacgatca aaggtaaaaa cggcgagctg actcgtactc tcaacgatgc tgttgaagtt
     8041 aaacatgcag ataataccct gaccttcggt ccgcgtgatg gttacgcaga cggttgggca
     8101 caggctggta ccgcgcgtgc cctgctgaac tcaatggtta tcggtgttac cgaaggcttc
     8161 actaagaagc tgcagctggt tggtgtaggt taccgtgcag cggttaaagg taatgtgatt
     8221 aacctgtctc tgggtttctc tcatcctgtt gaccatcagc tgcctgcggg tatcactgct
     8281 gaatgtccga ctcagactga aatcgtgctg aaaggcgctg ataagcaggt gatcggccag
     8341 gttgcagcgg atctgcgcgc ctaccgtcgt cctgagcctt ataaaggcaa gggtgttcgt
     8401 tacgccgacg aagtcgtgcg tatcaaagag gctaagaaga agtaaggtaa cactatggat
     8461 aagaaatctg ctcgtatccg tcgtgcgacc cgcgcacgcc gcaagctcca ggagctgggc
     8521 gcaactcgcc tggtggtaca tcgtaccccg cgtcacattt acgcacaggt aattgcaccg
     8581 aacggttctg aagttctggt agctgcttct actgtagaaa aagctatcgc tgaacaactg
     8641 aagtacaccg gtaacaaaga cgcggctgca gctgtgggta aagctgtcgc tgaacgcgct
     8701 ctggaaaaag gcatcaaaga tgtatccttt gaccgttccg ggttccaata tcatggtcgt
     8761 gtccaggcac tggcagatgc tgcccgtgaa gctggccttc agttctaagg tagaggtgta
     8821 agatggctca catcgaaaaa caagctggcg aactgcagga aaagctgatc gcggtaaacc
     8881 gcgtatctaa aaccgttaaa ggtggtcgta ttttctcctt cacagctctg actgtagttg
     8941 gcgatggtaa cggtcgcgtt ggttttggtt acggtaaagc gcgtgaagtt ccagcagcga
     9001 tccagaaagc gatggaaaaa gcccgtcgca atatgattaa cgtcgcgctg aataacggca
     9061 ctctgcaaca ccctgttaaa ggtgttcaca cgggttctcg cgtattcatg cagccggctt
     9121 ccgaaggtac cggtatcatc gccggtggtg caatgcgcgc cgttctggaa gtcgctgggg
     9181 ttcataacgt tctggctaaa gcatatggtt ccaccaaccc gatcaacgtg gttcgtgcaa
     9241 ctattgatgg cctggaaaat atgaattctc cagaaatggt cgctgccaag cgtggtaaat
     9301 ccgttgaaga aattctgggg aaataaacca tggcaaagac tattaaaatt actcaaaccc
     9361 gcagtgcaat cggtcgtctg ccgaaacaca aggcaacgct gcttggcctg ggtctgcgtc
     9421 gtattggtca caccgtagag cgcgaggata ctcctgctat tcgcggtatg atcaacgcgg
     9481 tttccttcat ggttaaagtt gaggagtaag agatgcgttt aaatactctg tctccggccg
     9541 aaggctccaa aaaggcgggt aaacgcttgg gtcgtggtat cggttctggc ctcggtaaaa
     9601 ccggtggtcg tggtcacaaa ggtcagaagt ctcgttctgg cggtggcgta cgtcgcggtt
     9661 tcgagggtgg tcagatgcct ctgtaccgtc gtctgccgaa attcggcttc acttctcgta
     9721 aagcagcgat tacagccgaa gttcgtctgt ctgacctggc taaagtagaa ggcggtgttg
     9781 tagacctgaa cacgctgaaa gcggctaaca ttatcggtat ccagatcgag ttcgcgaaag
     9841 tgatcctggc tggcgaagta acgactccgg taactgttcg tggcctgcgt gttactaaag
     9901 gcgctcgtgc tgctatcgaa gctgctggcg gtaaaatcga ggaataagta gcagatggct
     9961 aaacaaccgg gattagattt tcaaagtgcc aaaggtggct taggcgagct gaaacgcaga
    10021 ctgctgtttg ttatcggtgc gctgattgtg ttccgtattg gctcttttat tccgatccct
    10081 ggtattgatg ccgctgtact tgccaaactg cttgagcaac agcgaggcac catcattgag
    10141 atgtttaaca tgttctctgg tggtgctctc agccgtgctt ctatctttgc tctggggatc
    10201 atgccgtata tttcggcgtc gatcattatc cagctgctga cggtggttca cccaacgttg
    10261 gcggaaatta agaaagaagg ggagtctggt cgtcgtaaga tcagccagta cacccgctac
    10321 ggtactctgg tgctggcaat attccagtcg atcggtattg ctaccggtct gccgaatatg
    10381 cctggtatgc aaggcctggt gattaacccg ggctttgcat tctacttcac cgctgttgta
    10441 agtctggtca caggaacgat gttcctgatg tggttgggcg aacagatcac tgaacgaggt
    10501 atcggcaacg gtatttcaat cattatcttc gccggtattg tcgcgggact cccgccagcc
    10561 attgcccata ctatcgagca agcgcgtcaa ggcgacctgc acttcctcgt gttgctgttg
    10621 gttgcagtat tagtatttgc agtgacgttc tttgttgtat ttgttgagcg tggtcaacgc
    10681 cgcattgtgg taaactacgc gaaacgtcag caaggtcgtc gtgtctatgc tgcacagagc
    10741 acacatttac cgctgaaagt gaatatggcg ggggtaatcc cggcaatctt cgcttccagt
    10801 attattctgt tcccggcgac catcgcgtca tggttcgggg gcggtactgg ttggaactgg
    10861 ctgacaacaa tttcgctgta tttgcagcct gggcaaccgc tttatgtgtt actctatgcg
    10921 tctgcaatca tcttcttctg tttcttctac acggcgttgg ttttcaaccc gcgtgaaaca
    10981 gcagataacc tgaagaagtc cggtgcattt gtaccaggaa ttcgtccggg agagcaaacg
    11041 gcgaagtata tcgataaagt aatgacccgc ctgaccctgg ttggtgcgct gtatattacc
    11101 tttatctgcc tgatcccgga gttcatgcgt gatgcaatga aagtaccgtt ctacttcggt
    11161 gggacctcac tgcttatcgt tgttgtcgtg attatggact ttatggctca agtgcaaact
    11221 ctgatgatgt ccagtcagta tgagtctgca ttgaagaagg cgaacctgaa aggctacggc
    11281 cgataattgg tcgcccgaga agttacggag agtaaaaatg aaagttcgtg cttccgtcaa
    11341 gaaattatgc cgtaactgca aaatcgttaa gcgtgatggt gtcatccgtg tgatttgcag
    11401 tgccgagccg aagcataaac agcgccaagg ctgatttttt cgcatatttt tcttgcaaag
    11461 ttgggttgag ctggctagat tagccagcca atcttttgta tgtctgtgcg tttccatttg
    11521 agtatcctga aaacgggctt ttcagcatgg aacgtacata ttaaatagta ggagtgcata
    11581 gtggcccgta tagcaggcat taacattcct gatcataagc atgccgtaat cgcattaact
    11641 tcgatttatg gcgtcggcaa gacccgttct aaagccatcc tggctgcagc gggtatcgct
    11701 gaagatgtta agatcagtga gctgtctgaa ggacaaatcg atacgctgcg tgacgaagtt
    11761 gccaaatttg tcgttgaagg tgatctgcgc cgtgaaatca gcatgagcat caagcgcctg
    11821 atggatcttg gttgctatcg cggcttgcgt catcgtcgtg gtctcccggt tcgcggtcag
    11881 cgtaccaaga ccaacgcacg tacccgtaag ggtccgcgca aaccgatcaa gaaataatcg
    11941 gggtgattga ataatggcaa aggcaccaat tcgtgcacgt aaacgtgtaa gaaaacaagt
    12001 ctctgacggc gtggctcata tccatgcttc tttcaacaac accatcgtga ctatcactga
    12061 tcgtcagggt aacgcgttgg gttgggcaac agccggtggt tccggtttcc gtggttctcg
    12121 caaatccact ccgtttgcag ctcaggttgc agcagagcgt tgcgctgacg ccgtgaaaga
    12181 atacggcatc aagaatctgg aagttatggt taaaggtccg ggtccaggcc gcgaatctac
    12241 tattcgtgct ctgaacgccg caggtttccg catcactaac attactgatg tgactccgat
    12301 ccctcataac ggttgtcgtc cgccgaaaaa acgtcgcgta taacgcctcg ttttccaggt
    12361 ttgttggaga aagaaaatgg caagatattt gggtcctaag ctcaagctga gccgtcgtga
    12421 gggcaccgac ttattcctta agtctggcgt tcgcgcgatc gataccaagt gtaaaattga
    12481 acaagctcct ggccagcacg gtgcgcgtaa accgcgtctg tctgactatg gtgtgcagtt
    12541 gcgtgaaaag caaaaagttc gccgtatcta tggtgtgctg gagcgtcagt tccgtaacta
    12601 ctacaaagaa gcagcacgtc tgaaaggcaa caccggtgaa aacctgttgg ctctgctgga
    12661 aggtcgtctg gacaacgttg tataccgtat gggcttcggt gccactcgtg cagaagcacg
    12721 tcagctggtt agccataaag caattatggt aaacggtcgt gttgttaaca tcgcttctta
    12781 tcaggttagt ccgaatgacg ttgtaagcat tcgtgagaaa gcgaagaagc agtctcgcgt
    12841 gaaagccgct ctggagctgg ctgagcagcg tgaaaagcca acttggctgg aagttgatgc
    12901 tggcaagatg gaaggtacgt ttaagcgtaa gccggagcgt tctgatctgt ctgcggacat
    12961 taacgaacac ctgatcgtcg agctttactc caagtaaagc ttagtaccaa agagaggaca
    13021 caatgcaggg ttctgtgaca gagtttctaa aaccgcgcct ggttgatatc gagcaagtga
    13081 gttcgacgca cgccaaggtg acccttgagc ctttagagcg tggctttggc catactctgg
    13141 gtaacgcact gcgccgtatt ctgctctcat cgatgccggg ttgcgcggtg accgaggttg
    13201 agattgatgg tgtactacat gagtacagca ccaaagaagg cgttcaggaa gatatcctgg
    13261 aaatcctgct caacctgaaa gggctggcgg tgagagttca gggcaaagat gaagttattc
    13321 ttaccttgaa taaatctggc attggccctg tgactgcagc cgatatcacc cacgacggtg
    13381 atgtcgaaat cgtcaagccg cagcacgtga tctgccacct gaccgatgag aacgcgtcta
    13441 ttagcatgcg tatcaaagtt cagcgcggtc gtggttatgt gccggcttct acccgaattc
    13501 attcggaaga agatgagcgc ccaatcggcc gtctgctggt cgacgcatgc tacagccctg
    13561 tggagcgtat tgcctacaat gttgaagcag cgcgtgtaga acagcgtacc gacctggaca
    13621 agctggtcat cgaaatggaa accaacggca caatcgatcc tgaagaggcg attcgtcgtg
    13681 cggcaaccat tctggctgaa caactggaag ctttcgttga cttacgtgat gtacgtcagc
    13741 ctgaagtgaa agaagagaaa ccagagttcg atccgatcct gctgcgccct gttgacgatc
    13801 tggaattgac tgtccgctct gctaactgcc ttaaagcaga agctatccac tatatcggtg
    13861 atctggtaca acgtaccgag gttgagctcc ttaaaacgcc taaccttggt aaaaaatctc
    13921 ttactgagat taaagacgtg ctggcttccc gtggactgtc tctgggcatg cgcctggaaa
    13981 actggccacc ggcaagcatc gctgacgagt aaccggatca caggttaagg ttttactgag
    14041 aaggataagg tcatgcgcca tcgtaagagt ggtcgtcaac tgaaccgcaa cagcagccat
    14101 cgccaggcta tgttccgcaa tatggcaggt tcactggttc gtcatgaaat catcaagacg
    14161 actctgccta aagcgaaaga gctgcgccgc gtagttgagc cgctgattac tcttgccaag
    14221 actgatagcg ttgctaatcg tcgtctggca ttcgcccgta ctcgtgataa cgagatcgtg
    14281 gcaaaactgt ttaacgaact gggcccgcgt ttcgcgagcc gtgccggtgg ttacactcgt
    14341 attctgaagt gtggcttccg tgcaggcgac aacgcgccga tggcttacat cgagctggtt
    14401 gatcgttcag agaaagcaga agctgctgca gagtaatctg aagcaacgta aaaaaacccg
    14461 ccccggcggg tttttttata cccgtagcat ccccacttat ctacaatagc tgtactcttt
    14521 ttgttcatcc cctggagtat ttatgtggtt acttgaccag tgggcagagc gtcatatagc
    14581 agaagcgcaa gcgaaaggtg agtttgataa tctggcaggt agcggcgaac cattgatact
    14641 ggatgatgat tctcatgtgc caccggaatt acgtgcgggg tatcgcttgc tgaagaatgc
    14701 tggttgctta ccgccagaac ttgagcagcg gagggaagca attcagcttc tggatatcct
    14761 gagaggtatc cgtcacgatg atccgcaata tcaagaggtt agccgtcgat tgtcattact
    14821 ggaattgaag ctgcgacaag ctggatttag taccgatttt ttacgcggcg attatgctga
    14881 caagttgttg gacaaaatca acgataacta gtggagtatg tatgtatcgc attggtgagc
    14941 tggcaaaaat ggcggaagta acacctgaca cgattcgtta ttacgaaaaa cagcagatga
    15001 tggagcatga agtgcgtact gaaggcgggt ttcgcctgta taccgaaagc gatctccagc
    15061 gattgaaatt tatccgccat gccagacaac taggtttcag tctggagtcg atccgcgagt
    15121 tgctgtcgat ccgcatcgat cctgaacacc atacctgtca ggagtcaaaa ggcattgtgc
    15181 aggaaagatt gcaggaagtc gaagcacgga tagccgagtt gcagagtatg cagcgttcct
    15241 tgcaacgcct taacgatgcc tgttgtggga ccgcccatag cagtgtttat tgttcgattc
    15301 ttgaagctct tgaacaaggg gcgagtggcg ttaagagtgg ctgttgattt tttgcactgg
    15361 caggattaca ctcgcgccgt aaaataacca attggagttt ttatgagccg atatcagcat
    15421 actaaagggc agataaggga taatgcgata gaagcattac tacatgatcc cttattccga
    15481 cagcgcgtag agaaaaataa gaaggggaaa ggcagttaca tgcgaaaagg aaaacatggc
    15541 aatcggggga actgggaggc cagtggcaag aaagtaaatc acttttttac cactggtctt
    15601 ctgctttcag gcgcttgtta agagcggtta ttctgctctt tcagcaaatc acgaatttct
    15661 gccagtaata cttcttcttt agttggtgca ggtgcggcag ctggttcttc ttttttccga
    15721 ttcagtttgt tgattagctt aatcgccata aagatggcaa aggccacaat cagaaaatca
    15781 aagacgtttt gaatgaagac accgtaatgc atcacaacag cagggatatc cccctgcgca
    15841 tcgcgtagcg tgacagcaaa ctgtttaaag tcgatcccgc caattaataa gcccagaggt
    15901 ggcatgatga tatcggcaac cagtgaagat acaatcttcc cgaatgccgc accgataatg
    15961 acacccaccg ccaaatccac cacgttcccg cgcatcgcaa attcgcgaaa ttctttaata
    16021 atgctcatgt tattctccct atgaagccga caaccataag tctaacaaat gttaagccat
    16081 tttcctgcca ggaatgaatt taattaatcc ttgataatca aagggaaata ataaggcgtc
    16141 attagacgcc ttattaatta caagaagaaa gggcttggct ggaagagtct ttcgacgtcg
    16201 gtaataaact ttttatctgt gaggaacata attacgtgat cgccttgctc aatgcgcaga
    16261 ttgtcattgg caatcatcac gtcgtttcca cgtaccaccg ctccaataat cgttcctggc
    16321 ggtagcttga tttcgtcaat gactctgccg acaacgcgtg aggtgctttc atcaccgtga
    16381 gcaacggctt caatagcttc tgctacgccg cggcgcaatg aggaaacacc aacaatatct
    16441 gcttttcgca catggctaag caacgcagaa atagttgctt gttgtggtga aattgcaata
    16501 tcgatcacgc tcccctgaac cagatccaca taagcgcgac gctggatcaa taccatcacc
    16561 tttttcgcac ccatacgttt ggcaagcatg gcggacatga tattggcctc gtcatcgttg
    16621 gtgacggcaa taaacagatc aacttgatcg atatgttctt cggccagcag ttcttgatcc
    16681 gacgcatcac caaaaaagac gatcgtattc tgcaactttt ccgccagttc ggcagcgcgc
    16741 tgctgattac gttcgatgag tttaacgctg taatcttttt ccagacgacg cgccagccct
    16801 gcaccgatat taccgccacc aaccagcatg atccgcttat acggtttttc cagtcgctgt
    16861 aattcactca tcaccgcgcg gatatgctgt gaagcggcaa taaagaacac ttcatcacca
    16921 gcttcaacaa tggtcgaacc ttgtggacga atggggcgat cgtggcggaa aattgctgcc
    16981 acacgagtat cgatatgtgg catatgttcg cgcatggtcg aaagtgcatt accaatcagc
    17041 gggccgccat aataggcttt aactacagcg aggctgactt taccctcagc gaagttcacc
    17101 acctgcaatg cgcctggata ctcaatcagt cggtaaatat tatcgataac caactgctct
    17161 ggtgcgatca gatgatcaat cggtacagca tctgaatgaa atagcttatc ggcatcgcgt
    17221 acgtagtctg gtgagcggat gcgagcgatg cgattagggg tgttgaaaag tgagtaggct
    17281 acctggcagg caaccatatt ggtttcatct gaactggtta cagcaaccag catatcggcg
    17341 tcgtcggcac ctgcctcccg caatacgcgt ggatgagagc catgcccctg cacgactcgc
    17401 aggtcaaatt tatcctgcaa ggtccgcaga cgctcaccgt tggtatcgac aacagtaata
    17461 tcgttgttct cgccaaccag gttttccgcc agtgtgccgc caacctggcc ggcacccaga
    17521 atgataattt tcatcagtct cgacccgtta tctcatcact ttttgattag cttagcgtaa
    17581 aagaagccgt cgccctcttc ggcaccaggc agattttgtt tacccggttg ctctggtgtt
    17641 cctgtttcgc aaagttcggc atcagcggta cgttgcaaaa aagctttaat ctgcaggcta
    17701 ttctcttccg gtaacaccga acaggtggca tagaccaggg ttccaccgga ttttaaatgc
    17761 ggccaaatgg cgtcgagaat ttcagactgc aattgcgcga gttccgggat atcgcgatcg
    17821 cgacgtaacc atttaatatc cggatggcga cgaatcaccc ccgttgctga acaaggcgca
    17881 tctaataaaa tgcgatcaaa ctgttgctcg ccacaccatt gggaagggta acggccatca
    17941 ccttgtttca cggttgcctt cataccaagg cgttttaaat tgtcgtaaac gcgagagagg
    18001 cgctgttcgt caatatcaac cgcaacaacc tgcgcttctg gtgccacctc aaggatatgc
    18061 gttgttttac cgccgggggc ggcacaaaga tccagaatgt gttcaccgtt ttgtggcgca
    18121 agccaggtca tgcaaccttg tgctgatgca tcctgaacgg taacccatcc gtcttcaaaa
    18181 ccaggtagcg catgaacagg tgcaggtgtt tccagacgta cagcatcagg gtaatccgca
    18241 tgcgggaaac ctttcattcc tgcttcatcc agcaatgcaa gccagctgtc gcgggaatga
    18301 tgcgtacgat taacgcgcag ccacattggc ggacgctggt tattggcttc gacgatggat
    18361 tgccactgct ctggatacgc tttttgcaga cgcttcagca accaggaagg atgcagataa
    18421 cgtgcatcac tggcattaaa cttggctaat aactcttctt gctgacgctg gaactggcgt
    18481 aatacaccgt taatcaaccc tttaagttgc ggacgcttaa ttgcgatagc gccttcaacc
    18541 gtttcagcca gcgcagcatg aggtggaatg cgggtataaa gcagttgata caaaccaacc
    18601 ataatcaggt aatgcacagt gcgctgtttg ccggtcatcg gacgggccat taacttatta
    18661 atcagccagt ctaactgcga aagcgtacgc agtacgccaa agcacaactc ttgaagaagt
    18721 gctttgtctt tatcagaaac tttttgctgg agcggtggca gaatgttgct taatgattgc
    18781 ccttgctcga cgacttgttc aacggcctgg gccgccatgc tacgtaaatt acgttgtttt
    18841 ttcataagta taaaaatgcc cggtaagacc gggcttagaa gagtggacta tcaggccaga
    18901 cggttgcccg gaacaaacca ttcccgacga gaattcagga ggtcttgcgc gctcatcgct
    18961 ttcttacccg caggttgtaa cgagagcaga ttcaggattc catcaccagt tgcaacctga
    19021 atgccttgtt tgttggcttc aaggatcgtt cctggtgcag cgttggttgc cgtatcaatg
    19081 accgacgctt tccagacttt aaccggctgt ctttcaattt ccagccagct cattggccat
    19141 ggattgaaag cgcgaatgta gcgttcaagc tgtgctgccg aaagtgacca gtcaatacgc
    19201 gcttcttctt tactcaactt ttcggcgtaa gtgacaagag tttcgtcctg aacttctggt
    19261 ttcgccgtgc cgtctgccag ttgtttcaac gtggtgataa gcccttgtgg gccaagctct
    19321 gccagcttgt cgtacagcgt accactggta tcttctgcag taatcgggca ggagagctta
    19381 tagagcatgt caccggtgtc taaaccgaca tccatttgca taatggtcac accagtttct
    19441 gcatcacccg cccatagtga gcgttggatt ggtgcagcac cgcgccagcg tggcagcagt
    19501 gaaccatgaa cgttgataca gccaagacgc ggcatctcca gcactgcttt aggcagaatt
    19561 aagccatagg cgacgacgac cataacatca gcctgcagat cggcgaccag ttgctggttt
    19621 tcttgtggac gcagggaaac aggttgaaaa acgggcagac ctttttcctc agccagaact
    19681 ttaaccgggc tgggcatcag ttttttaccg cgtcctgccg gtcggtctgg ctgggtgaac
    19741 acgccaacga cgttatgacc agaagacaac agcgcgtcga gatgacgcgc tgcaaagtca
    19801 ggtgtacccg caaaaataat acgtagtgat tctgacacgt tagttcttat ccttaagccc
    19861 gggctttcag acgatccagt ttttcaactt tctgacgaat acgttgttgt ttcaacggtg
    19921 acagataatc cataaacagt ttgccgacca ggtgatccat ctcatgctga atacagatgg
    19981 ctaacagacc gtctgcttcc aattcaaatg gtttaccgtc gcggtccagg gcgcgaattt
    20041 taactttctc tgcgcgtggc actaaagcac gttgttcagg gatcgacagg caaccttctt
    20101 caatgcctgt ttcgccgctt ttttctaaaa gctccggatt gattaacacc agccgttcgt
    20161 cacggttttc cgaaacatca ataacaatga tacgttgatg gatatcaacc tgggttgccg
    20221 ccaggccaat accttcttct gcgtacatcg tctcgaacat atcatcgacg atacgctgaa
    20281 tttctgcatt cacttcttct accggtttag caactttgcg aagccgctcg tccggaatat
    20341 gtaacacttg caaaactgac ataaatctcc agagatgtgt tcaggagtta gaaagattat
    20401 ttcttctatt ctagacaaat ccccctctga ttgacagcat cactgaccaa tcgcaaagat
    20461 tgctaaggct gcttatggca gggagataag gatggtcgat acagatattt ggctgcgttt
    20521 aatgagcatc agcagcttgt acggcgatga tatggtccgt atagctcact ggctggcaaa
    20581 acagtcgcat attgatgcgg ttgtattgca gcaaacaggg cttacattgc ggcaggcaca
    20641 acgctttctt tcatttccgc gaaagagtat cgaaagctca ctttgttggt tggagcaacc
    20701 caaccatcat ttaatccctg cggacagcga attttatcct cctcaacttc tggcgacgac
    20761 agattacccc ggcgcactgt ttgttgaagg agaactgtac gcgctgcatt catttcagct
    20821 tgccgtagtg gggagtcggg cgcattcatg gtatggcgag cgatggggac gattattttg
    20881 cgaaactctg gccacgcgtg gagtgacaat tacgagtgga ctggcgcgtg gaatcgatgg
    20941 tgtggcgcat aaagcggcct tacaggtaaa tggcgtcagc attgctgtat tggggaacgg
    21001 acttaatacc attcatccgc gccgccatgc ccgactggct accagtttgc ttgaacatgg
    21061 tggggcactt gtctcggaat ttcccctcga tgtttcaccc cttgcttaca atttcccacg
    21121 aagaaatcgc attatcagtg gtctaagtaa aggtgtactg gtggtggaag cggctttgcg
    21181 cagtggttcg ttggtgacag cacgttgtgc gcttgagcag gggcgtgaag tttttgcctt
    21241 gccaggacca atagggaatc cgggaagcga agggcctcac tggttaataa aacaaggtgc
    21301 gattcttgtg acggaaccgg aagaaattct ggaaaacttg caatttggat tgcactggtt
    21361 gccagacgcc cctgaaaatt cattttattc accagatcag caagacgtgg cattgccatt
    21421 tcctgagctc ctggctaacg taggagatga ggtaacacct gttgacgtcg tcgctgaacg
    21481 tgccggccaa cctgtgccag aggtagttac tcaactactc gaactggagt tagcaggatg
    21541 gatcgcagct gtacccggcg gctatgtccg attgaggagg gcatgccatg ttcgacgtac
    21601 taatgtattt gtttgaaacc tatattcaca cagaagctga gttgcgtgtg gatcaagaca
    21661 aacttgaaca ggatcttacc gacgcaggat ttgatcgaga agatatctac aatgccctgc
    21721 tttggctgga aaagcttgcg gattatcagg aaggactgac agaaccgatg caactggcct
    21781 ctgatccact ctccatgcgt atttataccc ctgaggagtg tgaaagactg gatgccagct
    21841 gtcgtggttt tctgcttttc cttgagcaaa ttcaggtgct taaccttgaa atccgtgaaa
    21901 tggtgataga gcgagtgctc gcgctggata ccgcagagtt cgacctggaa gacctgaaat
    21961 gggtaatcct gatggtgttg ttcaatattc cgggctgcga aaatgcgtac cagcaaatgg
    22021 aagaattact ctttgaagtg aatgaaggta tgctgcatta atcatttctt taattcagca
    22081 taagttgtta tggcgaaatc agcactgttc acggtgcgta ataatgagtc ctgcccaaag
    22141 tgcggggctg aactggttat tcgatccggg aaacacggtc cgtttcttgg atgctcacag
    22201 tatccggcgt gtgactacgt ccgtcctctg aaatcttcag cggatggaca tattgtcaaa
    22261 gttctggagg ggcaggtttg ccctgcatgt ggcgcaaatc tggtattacg ccagggacgc
    22321 tttggtatgt ttattggttg cagtaactac cctgaatgcg aacataccga acttatcgat
    22381 aaaccggacg aaacagcaat tacatgcccc caatgtcgga cgggccatct ggtccagcgc
    22441 cgctcccgtt atggcaaaac atttcactcc tgtgatcgct acccggagtg tcaatttgcc
    22501 attaacttca aacccatagc tggagaatgc cctgagtgtc attatccact actcatcgaa
    22561 aagaaaaccg cgcagggtgt aaaacacttt tgtgccagta aacaatgtgg aaagccggtt
    22621 tcggcggaat aataacgtga ataataacct gcaaggagac gctatcgcag ctgcgataga
    22681 tgtcctcaat gaagaacgtg tcatcgccta tccaacggaa gccgttttcg gtgttgggtg
    22741 cgatcctgat agcgaaacag cagtgatgag actgttggag ttaaaacagc gtccggttga
    22801 taaggggctg attttaatcg cggcaaatta cgagcagctt aaaccctata ttgatgacac
    22861 catgctgact gatgcgcagc gtgaaaccat tttttcccgc tggccaggtc ctgtcacctt
    22921 tgtctttccc gcgcctgcga caacaccgcg ctggttgacg ggccgctttg attcgcttgc
    22981 tgtacgagtc accgaccatc cgttggtggt tgctttgtgc caggcttatg gtaaaccgct
    23041 ggtttctacc agtgccaact tgagtggatt gccaccttgt cgaacagtag acgaagttcg
    23101 cgcacaattt ggcgcggcgt tcccggttgt gcttggtgaa acgggggggc gtttaaatcc
    23161 ttcagaaatc cgcgatgccc tgacgggtga actgtttcga caggggtaac ataatggaaa
    23221 cctatgctgt ttttggtaat ccgatagccc acagcaaatc gccattcatt catcagcaat
    23281 ttgctcagca actgaatatt gaacatccct atgggcgcgt gttggcaccc atcaatgatt
    23341 tcatcaacac actgaacgct ttctttagtg ctggtggtaa aggtgcgaat gtgacggtac
    23401 cttttaaaga agaggctttt gccagagcgg atgagcttac tgaacgggca gcgttggctg
    23461 gtgctgttaa taccctcaag cggttagaag atggacgctt gcagggtgac aataccgatg
    23521 gtataggttt gttaagcgat ctggaacgtc tgtcttttat ccgtccgggt ttacgtattc
    23581 tgcttatcgg cgctggtgga gcatctcgcg gcgtactact accactcctt tccctggact
    23641 gtgcggtgac aatcactaat cggacggtat cccgtgcgga agagttggct aaattgtttg
    23701 cgcacactgg cagtattcag gcgttgggta tggacgaact ggaaggtcat gagtttgatc
    23761 tcattattaa tgcaacatcc agtggcatca gtggtgatat tccggcgatc ccgtcatcgc
    23821 tcattcatct aggcatttat tgctatgaca tgttctatca gaaaggaaaa actccttttc
    23881 tggcatggtg tgagcagcga ggctcaaagc gtaatgctga tggtttagga atgctggtgg
    23941 cacaggcggc tcatgccttt cttctctggc acggtgttct gcctgacgta gaaccagtta
    24001 taaagcaatt gcaggaggaa ttgtccgcgt gaatcaggcc atccagtttc cggacaggga
    24061 agagtgggac gagaataaaa aatgtgtatg ttttcccgct ctcgtgaatg gtatgcaact
    24121 gacatgcgcg atctctggcg agagtctggc gtatcgcttt actggagata cgccagaaca
    24181 gtggttagcg agttttcgtc agcatcgctg ggacctggaa gaagaagcgg aaaacttaat
    24241 tcaggaacaa agtgaagatg atcaaggctg ggtctggtta ccctgatcca gatattcgtc
    24301 cttccatttc acgtaattat tcgcggaata gcgtaaccca gccttctctt catcacttaa
    24361 cgggcggatc tgtttgacgg ggctaccgag atacagatat ccgctctcca gccgtttatt
    24421 ttgtgggacc agactacccg caccaatcat cacatcatct tctactattg cgccatcaag
    24481 taaaattgag cccatcccaa ccaaaactcg attgccaatg gtgcagccgt ggagcatcac
    24541 cttgtgacca acagtgacat cttcgccaat ggttaatggg ttgccatctg ggttgtacga
    24601 ggatttatga gtgacatgca acatactgcc atcctggata ttggtgcgtg ctccgatctg
    24661 tacataatgt acatctccac gaatcacaac gagcggccag atccccacat catcagccag
    24721 acgaacgcca ccaatcacga cactgctatc gtcgatcatt acgcgctgac cgatttgtgg
    24781 aaaaagatcg cggtatgggc gtaaaacatc agacatactt acctcagcaa taaatgattt
    24841 actaatgact ttgggggcat tattggcctt gtgcaagtct tttagtatgc aaaaaagcac
    24901 cgttttgtgt gcgattgcag caaaaagggt gaaaaaacaa caaacagaaa aaaagatcaa
    24961 aaaaatactt gtgcaaaata ttgggatccc tataatgcgc ctccgttaag acgacaacgt
    25021 gaaacacttc acaggatggt cggaacaacg aagagaaaaa atcctgaaat tcagggttga
    25081 ctctgaaaga ggaaagcgta atatacgcca cctcgcgaca gtgagctgaa agccgcgtcg
    25141 caactgctct ttaacaattt atcagacaat ctgtgtgggc actcgaagat acggattctt
    25201 aacgtcgcaa gacgaaaaat gaataccaag tctcaagagt ga
//
LOCUS       DAJVUK010000045        25121 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.045, whole genome shotgun sequence.
ACCESSION   DAJVUK010000045 DAJVUK010000000
VERSION     DAJVUK010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25121
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.045"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..393
                     /gene="hyfA"
                     /locus_tag="OQQ57_001750"
     CDS             <1..393
                     /gene="hyfA"
                     /locus_tag="OQQ57_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HCS1956550.1"
                     /translation="QLNESLCIGCKLCAVVCPFGAISASGSRPVNAPAQYVFQADGSL
                     KDGEENAPTQHALLRWEPGVQTVAVKCDLCNFLPEGPACVRACPNQALRLITDDSLQR
                     QMKEKQRLAASWFANGGEDPLSLTQEQH"
     gene            393..2410
                     /gene="hyfB"
                     /locus_tag="OQQ57_001751"
                     /pseudo
     CDS             393..2410
                     /gene="hyfB"
                     /locus_tag="OQQ57_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
     gene            2421..3368
                     /gene="hyfC"
                     /locus_tag="OQQ57_001752"
     CDS             2421..3368
                     /gene="hyfC"
                     /locus_tag="OQQ57_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfC"
                     /protein_id="HCS1956551.1"
                     /translation="MRQTLCDGYLVIFALAQAVILLLLTPLFTGISRQIRARMHSRRG
                     PGIWQDYREIHKLFKRQEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
                     GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
                     GSTHIEMISNTLATGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
                     YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
                     LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
     gene            3385..3495
                     /locus_tag="OQQ57_001753"
     CDS             3385..3495
                     /locus_tag="OQQ57_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoin racemase"
                     /protein_id="HCS1956552.1"
                     /translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGFCSPH"
     gene            3507..4614
                     /locus_tag="OQQ57_001754"
                     /pseudo
     CDS             3507..4614
                     /locus_tag="OQQ57_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001442177.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit D"
     gene            4626..5276
                     /gene="hyfE"
                     /locus_tag="OQQ57_001755"
     CDS             4626..5276
                     /gene="hyfE"
                     /locus_tag="OQQ57_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HCS1956553.1"
                     /translation="MIGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
                     ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            5281..6861
                     /gene="hyfF"
                     /locus_tag="OQQ57_001756"
     CDS             5281..6861
                     /gene="hyfF"
                     /locus_tag="OQQ57_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HCS1956554.1"
                     /translation="MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGIT
                     LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEV
                     AHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS
                     SLESAWKYIIICTVDVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLM
                     LLAFVFVLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII
                     CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVALGIGGP
                     LGIFAALLHTLNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGAL
                     ALAGMPPFNIFLSEFMTVTAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPK
                     AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW
                     HDFLPSGTASVSEKHSER"
     gene            6851..8566
                     /gene="hyfG"
                     /locus_tag="OQQ57_001757"
     CDS             6851..8566
                     /gene="hyfG"
                     /locus_tag="OQQ57_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HCS1956555.1"
                     /translation="MNVNSSSNSGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLHKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFA
                     LDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            8576..9115
                     /gene="hyfH"
                     /locus_tag="OQQ57_001758"
     CDS             8576..9115
                     /gene="hyfH"
                     /locus_tag="OQQ57_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HCS1956556.1"
                     /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA
                     DLYTRATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLRAQASVCPECKQ
                     RATLINDDTDVPLVAKEQL"
     gene            9112..9870
                     /gene="hyfI"
                     /locus_tag="OQQ57_001759"
     CDS             9112..9870
                     /gene="hyfI"
                     /locus_tag="OQQ57_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
                     /protein_id="HCS1956557.1"
                     /translation="MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGC
                     NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH
                     KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
                     QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD
                     PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
     gene            9863..10276
                     /gene="hyfJ"
                     /locus_tag="OQQ57_001760"
     CDS             9863..10276
                     /gene="hyfJ"
                     /locus_tag="OQQ57_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HCS1956558.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHRSQVMYYSLAIGHHVGV
                     IDCLNVAFRCPLTENEDWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            10306..12318
                     /gene="hyfR"
                     /locus_tag="OQQ57_001761"
                     /pseudo
     CDS             10306..12318
                     /gene="hyfR"
                     /locus_tag="OQQ57_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416986.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HyfR"
     gene            12340..13184
                     /locus_tag="OQQ57_001762"
                     /pseudo
     CDS             12340..13184
                     /locus_tag="OQQ57_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311381.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
     gene            complement(13222..14283)
                     /locus_tag="OQQ57_001763"
     CDS             complement(13222..14283)
                     /locus_tag="OQQ57_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCS1956559.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            14496..15959
                     /gene="bepA"
                     /locus_tag="OQQ57_001764"
     CDS             14496..15959
                     /gene="bepA"
                     /locus_tag="OQQ57_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HCS1956560.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADNADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHLTQRHLARAMEDQQRSTPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            15980..16339
                     /gene="arsC"
                     /locus_tag="OQQ57_001765"
     CDS             15980..16339
                     /gene="arsC"
                     /locus_tag="OQQ57_001765"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HCS1956561.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(16477..17223)
                     /gene="hda"
                     /locus_tag="OQQ57_001766"
     CDS             complement(16477..17223)
                     /gene="hda"
                     /locus_tag="OQQ57_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HCS1956562.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(17273..18562)
                     /gene="uraA"
                     /locus_tag="OQQ57_001767"
     CDS             complement(17273..18562)
                     /gene="uraA"
                     /locus_tag="OQQ57_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HCS1956563.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEEADITDK"
     gene            complement(18648..19274)
                     /gene="upp"
                     /locus_tag="OQQ57_001768"
     CDS             complement(18648..19274)
                     /gene="upp"
                     /locus_tag="OQQ57_001768"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HCS1956564.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            19598..20635
                     /gene="purM"
                     /locus_tag="OQQ57_001769"
     CDS             19598..20635
                     /gene="purM"
                     /locus_tag="OQQ57_001769"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HCS1956565.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            20635..21273
                     /gene="purN"
                     /locus_tag="OQQ57_001770"
     CDS             20635..21273
                     /gene="purN"
                     /locus_tag="OQQ57_001770"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HCS1956566.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDVTARVQTQEHAIYPLVISWFADGRLKIHENAAWLDGQRLPPQGYAADE"
     gene            21445..23511
                     /gene="ppk1"
                     /locus_tag="OQQ57_001771"
     CDS             21445..23511
                     /gene="ppk1"
                     /locus_tag="OQQ57_001771"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HCS1956567.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNPEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPHLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            23516..25057
                     /gene="ppx"
                     /locus_tag="OQQ57_001772"
     CDS             23516..25057
                     /gene="ppx"
                     /locus_tag="OQQ57_001772"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HCS1956568.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRVEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
BASE COUNT         5719 a         6577 c         6685 g         6140 t
ORIGIN      
        1 caactcaacg aaagcctctg tattggctgc aagctttgcg ccgtggtctg cccatttggc
       61 gcaatcagcg cttcaggaag ccgtccggtg aatgcccctg cgcaatatgt ttttcaggct
      121 gacggctcac tcaaagatgg cgaagaaaac gcgccgaccc aacatgcttt gctgcgctgg
      181 gaaccgggtg tccagaccgt cgcggtgaaa tgcgacctgt gtaatttctt gccagaaggt
      241 ccggcctgcg ttcgcgcttg cccgaatcag gcgttacggc tgattaccga cgatagcctg
      301 caacgtcaga tgaaagaaaa acagcgcctt gccgcaagct ggtttgccaa tggcggggag
      361 gatccccttt ccctcactca ggagcaacac taatggatgc cctgcaatta ttaacctggt
      421 cgctgatcct ctttctgttt gccagtctgg cttcgctgtt tttactcggt ctggacagac
      481 tggctattaa gctttccggc atcacatcgc tggtgggcgg cgtgattggc atcatcagcg
      541 gaattacgca attacatgct ggtgtaactt tagtcgcccg ttttgccacc ccttttgact
      601 ttgccgattt aaccctgcga atggatagcc tctcggtatt tatggtgctg gttatctcct
      661 tgctggtggt ggtttgttcg ctctattcat tgacttatat gcgcgaatac gagggcaaag
      721 gcgcggcggc gatgggcttc tttatgaatc ttttcatcgc atcgatggtt gccctgctgg
      781 tgatggacaa cgctttttgg ttcatcgtgc tgtttgaaat gatgtcgctg tcttcctggt
      841 ttctggtcat tgccaggcag gataaaacgt cgatcaacgc tggcatgctc tactttttta
      901 tcgcccacgc cggatcggtg ctgattatga tcgccttctt gctgatgggg cgcgaaagcg
      961 gcagcctcga ttttgccagt ttcgcacgct ttcactttct ccggggctgg cgtcggcgat
     1021 gtttctgctg gcctttttcg gttttggcgc gaaagccggg atgatgccgt tgcacagctg
     1081 gttgccgcgc gctcaccctg ccgcaccatc gcacgcttcg gcgttgatgt ctggcgtaat
     1141 ggtcaaaatc ggtattttcg gcatcctgaa agtagcgatg gatctgctgg cgcaaacggg
     1201 tttgcctctg tggtggggca ttctggtgat ggcgatcggc gcaatctccg cgctcctggg
     1261 cgtgctatat gcgctggcgg aacaggatat caaacggctg ctggcctgga gtaccgtcga
     1321 aaacgtcggc attattttgc tggcagtcgg tgtggcgatg gacggtctgt cactgcacga
     1381 cccgctgctc accgtggttg gactgctcgg cgcactgttt catctgctca accatgcgct
     1441 gttcaaaggg ctgctatttc tcggcgcggg cgcgattatt tcgcgtttgc atacccacga
     1501 catggaaaaa atgggggcac tggcgaaacg gatgccgtgg acagccgcag catgcctgat
     1561 tggttgcctc gcgatatcag ccattcctcc gctgaatggt tttatcagcg aatggtacac
     1621 ctggcagtcg ctgttctcac taagtcgtgt ggaagccgta gcgctacaac ttgcgggtcc
     1681 tattgctatg gtaatgctgg cagtcactgg tgggctggca gtaatgtgct tcgtcaaaat
     1741 gtacggtatt actttctgtg gtgcgccgcg cagtacacac gctgaagagg cacaggaagt
     1801 gccaaatacg atgatcgtcg ccatgctact gctcgcggca ctctgcgtat taattgcgct
     1861 tagtgccagt tggctggcac cgaagataat gcatattgcc catgcgttta ccaatacccc
     1921 tcccgtcact gtcgccagcg gaatagcact tgtacccggc acgtttcata cacgggtcac
     1981 tccttcatta ctgttgctgt tactactggc gatgcctttg ctgcctggcc tttactggct
     2041 gtggtgtcgt tcgcgccgcg cagcgtttcg tcgcacagga gatgcctggg catgcggcta
     2101 cggctgggaa aacgcgatgg ctccgtcagg caatggcgtg atgcagccgc tgcgtgtggt
     2161 cttctctgcg ttatttcgtc tacgacaaca gctcgaccct acgctgaggc taaataaaga
     2221 tcttgcgcac gtcaccgcca gggctcagag cacagaaccc ttctgggatg agcgggtgat
     2281 ccgccccatc gtgagcgcca cccaacggct ggccaaagaa atacagcatc tgcaaagcgg
     2341 cgactttcgt ctctattgcc tgtatctagt tgccgcactg gttgtgctgc taatcgctat
     2401 tgccgtctaa ggaaatcacc atgagacaaa ctctttgcga cggatatctg gtcatttttg
     2461 cgttagcaca ggccgtgatt ctgctgctgc taaccccgct ttttacgggt atttcccggc
     2521 agatacgcgc gcgtatgcac tcccgccgcg ggccggggat ctggcaggat tatcgcgaga
     2581 tccacaaact gtttaaacgc caggaagttg cgcctatatc ttcaggtctg atgttccgcc
     2641 tgatgccgtg ggtattaatc agcagcatgc tggtgctggc gatggcccta ccacttttta
     2701 ttaccgtttc cccttttgcg ggcggcggcg atctgatcac ccttatctat cttcttgccc
     2761 tgtttcgttt tttctttgct ctttccggac tggataccgg aagcccgttt gcgggagtcg
     2821 gtgccagtcg cgagttgacg ctcggcattc tggtcgaacc catgctcatt ctctcactgc
     2881 tggtattggc gctgatagca ggttccacgc atatcgagat gatcagcaat acgctggcaa
     2941 cgggctggaa ctcgccgcta accaccgtac tggcgttact ggcctgtggt tttgcctgct
     3001 tcattgagat gggaaaaatt ccctttgatg ttgctgaagc agaacaggaa ttacaggaag
     3061 gcccgctgac cgaatattcc ggtgccgggc tggcgctagc gaaatggggg ctggggctga
     3121 aacaggtcgt gatggcagca ctgtttgtgg ccctgtttct gccctttggg cgcgcgcaag
     3181 aactttctct cgcctgcctg ctgacttcac ttgtcgttac gctgctcaag gttttgctga
     3241 tttttgtact ggcctcaatc gcagaaaaca cgctggcacg cgggcgtttt ttactcattc
     3301 accatgtgac ctggcttggc ttcagccttg ctgcgcttgc atgggtcttc tggttaaccg
     3361 gtctgtaagg agcactgacg gaatatggaa aatcttgctc tgacgacgtt aatgctgcct
     3421 tttatcggcg cactggtcgt ttcgttttcg ccacaacgtc gggccgccga atgggggttt
     3481 tgttcgccgc actgaccacg ctgtgcatgt tgtcgctgat ctccgcgttt tatcaggccg
     3541 ataaagttgc cgtcacgttg acgttggtca acgtggggga tgtggcattg tttggcctgg
     3601 tcattgatcg cgtgagtacg ctgattctgt ttgtggtggt gtttctcggt ttgctggtca
     3661 cgatctactc cacgggttat ctgacggata aaaatcgcga acacccgcat aacggcacga
     3721 atcgttatta cgcatttttg ctggtgttta tcggcgcgat ggcgggactg gtactctcct
     3781 cgacgctgct cggtcagttg ttgttttttg aaattagggc ggctgctcct gggcgttgat
     3841 cagttattac cagagcgata aagcgcagcg ttcaacacta aaagcgttgc ttatcaccca
     3901 tatcggttcg ttggggttgt atcttgccgc cgccacgctg tttttgcaga ccggaacgtt
     3961 tgtgcttagc gcgatgagcg agttacatgg cgacgcacgt tatctggttt atggcggcat
     4021 cctgtttgcc gcgtggggga aatcggccca gctaccgatg caagcgtggc taccggacgc
     4081 aatggaagcg ccaacaccga tcagagccta tctccacgcc gcatcgatgg tgaaagtggg
     4141 cggctggcac tggagggcag catcgcctac atcgtcaacc acgcgttcgc taaaagcctg
     4201 tttttccttg tagcaggtgc gctgagttac agctgcggca cgcgcttgtt gccgcgtctg
     4261 cgtggcgtat tgcactccct gccgttgcca ggcgtgggtt tctgcgtggc agcgctggcg
     4321 attaccggtg tgccgccgtt caacggcttc ttcagtaaat tcccgctgtt tgccgccggt
     4381 tttgcgttgt cagtggagta ctggatcctg ctgcccgcca tgattctgct gatgattgaa
     4441 tcggtcgcca gtttcgcctg gtttattcgc tggtttggtc gcgttgtgcc tggcaaaccg
     4501 agcgaggccg tcgccgatgc cgcaccgctg ccagggtcaa tgcgcctggt gttgattgta
     4561 ctgattgtga tgtcgctgat ttccagcgta atcgccgcga cctggttgca gtaaggagat
     4621 gatgaatgat cggttctatg atcgtaaata atctggcggg actgatgatg ctgacatcgc
     4681 tgtttgtgat tagcgtcaaa agctatcgcc tgtcatgcgg attttacgcc tgccagtcgc
     4741 tggtgctggt gtctattttc gccactctct cgtgcctgtt cgccgcagag caactgctga
     4801 tctggtccgc cagcgccttt atcaccaaag tgctgctggt accgttaatc atgacttacg
     4861 ctgcacgaaa tattccccag aacatcccgg aaaaagcgtt attcggtccg gcaatgatgg
     4921 cactgctcgc ggcgttaatt gtcctgcttt gcgcatttgt cgttcagccc gtgaagctac
     4981 cgatggctac cgggctgaaa ccggcgctgg cggtagcgtt aggtcatttt ctgcttggcc
     5041 tgctgtgcat tgtcagccag cgcaatatcc tgcggcaaat ttttggttac tgcctgatgg
     5101 aaaacggctc ccatctggtg ctggcgcttc ttgcctggcg agcaccggaa ctggtggaaa
     5161 taggtatcgc taccgacgcc atcttcgccg tcattgtgat ggtgttactg gcaagaaaaa
     5221 tatggcgtac ccacggcacg ctggacgtga acaacttgac cgcgctgaag ggataatgag
     5281 atgagttatt ctgtgatgtt cgctttactc ctgctcacgc cgctgctttt ttcgctgctc
     5341 tgttttgcct gccggaaacg ggggctctct gcgacttgta cggtgactgt attacatagc
     5401 ttagggatca cactgctgct gattctggca ctctgggtgg tccaaactgc cgctgatgca
     5461 ggagaaatat tcgctgcggg actgtggctt catattgatg gtctgggcgg tttgttcctc
     5521 gccattcttg gtgtgattgg ctttctcacc ggtgtttact cgattggcta catgcgtcat
     5581 gaagtggcac acggcgagct ttcacccgtt acactgtgcg attactacgg tttcttccat
     5641 ctgtttttgt tcaccatgct gctggttgtt accagcaata acctgattgt gatgtgggcg
     5701 gcgatcgaag ccaccacctt aagctcggcg tttctggtag gcatttacgg tcagcgttca
     5761 tcgctggaat cagcatggaa gtacatcatt atttgtactg ttgatgtcgc ttttggtctg
     5821 ttcggtaccg tgctggtata cgccaacgcc gccagcgtta tgccgcaggc agaaatggcg
     5881 atattctgga gcgaggttct taagcaatcg tccttgcttg acccaacatt aatgctgttg
     5941 gcctttgtgt ttgtgctaat tggctttggt accaaaaccg ggctatttcc catgcacgcc
     6001 tggctgccgg atgctcacag tgaagcgccg agtccggtca gcgccctgct ctccgccgta
     6061 ttgctgaact gcgcgctgtt ggtgctgatt cgctattaca tcattatttg ccaagccatc
     6121 ggcagcgatt tccccaaccg gttgttgctc atcttcggca tgttgtcggt tgccgtggcg
     6181 gcatttttca ttctggtaca gcgggacatt aagcgtctgc tggcgtactc cagcgtggag
     6241 aacatggggc tggtcgcggt ggcgctaggc attggcgggc cgctgggaat ttttgccgcg
     6301 ctgctgcaca ccttaaacca cagtctggca aaaacgctgc tgttctgcgg ttccggcaat
     6361 gtactgctca agtacggcac gcgcgatctc aacgtcgtct gtgggatgct caaaatcatg
     6421 ccatttaccg ccgtgctgtt tggcggcggt gcgctggcgc tggcagggat gccgcccttc
     6481 aacatttttc ttagcgaatt tatgaccgtt accgcaggac tggcacgtaa tcacctgctg
     6541 attatcgtcc tgctgttatt gctgttaacg ctggtgctgg cgggcctggt acggatggct
     6601 gcgcgggtgt taatggcgaa accgccgaag gccgttaacc ggggtgatct cggctggttg
     6661 accacctcgc caatggtgat tctgctggtc atgatgctgg cgatgggaac gcatattcca
     6721 caacctgtca tcaggatcct ggcgggcgct tccactatag tcctctcagg gacgcacgac
     6781 ctgcctgcac aacgtagcac ctggcatgat tttttgcctt caggcaccgc atctgtttcg
     6841 gagaaacaca gtgaacgtta attcatcgtc aaatagtggc gaagcgattc tcgccgccct
     6901 gaaaacgcag ttccccggcg cggtactgga tgaagagcga caaacgcctg aacaggtcac
     6961 cattacggtg aaaatcaatc tgctgcctga cgttgtacat tatctttatt atcaacatga
     7021 tggctggctt ccagtcctgt ttggcaacga cgagcggaca cttaacggtc attacgcggt
     7081 ttattatgcc ctttcaatgg aaggggccga aaaatgctgg atcgtggtga aggcactggt
     7141 cgatgccgac agtcgggagt ttccgtcagt cacaccgcgc gtccctgccg cggtctgggg
     7201 cgagcgagaa attcgcgata tgtacgggct gattccggtt ggcctgccgg atcagcgtcg
     7261 cctggtgttg cccgatgact ggccggaaga tatgcatccg ctgcacaaag atgcgatgga
     7321 ttatcgactg cgccctgaac cgacgacaga ttccgaaacg tatgcgttta tcaatgaggg
     7381 caacagcgat gcgcgggtga tccctgtcgg cccgctgcat atcacctccg atgaaccggg
     7441 tcacttccgc ttgtttgtgg atggcgagca aattgtcgat gctgattacc gcctgtttta
     7501 tgtccatcga ggcatggaga aactggcaga aacgcggatg ggctacaacg aagtgacctt
     7561 cttatcggac cgcgtgtgtg ggatttgcgg ttttgcccac agtgtggcct ataccaactc
     7621 ggttgaaaat gcactgggga ttgaggtgcc gcaacgagcg cataccattc gctcgattct
     7681 gctggaagtc gaacggctac acagtcattt gctcaacctt ggcctctcct gccattttgt
     7741 tggttttgat accggcttta tgcaattttt ccgcgtgcgg gaaaagtcga tgacgatggc
     7801 ggaattgctg accgggtcgc gtaaaaccta cggtctgaat ctgattggtg gtgttcgccg
     7861 cgatattctc aaagagcaac gtctgcaaac gctgaaactg gtgcgcgaga tgcgcgccga
     7921 cgtgtcggag ctggtagaga tgctgcttgc tacgccgaat atggaacaac gcactcaggg
     7981 cattggcatt ctcgaccgac aaatcgcccg tgattatagc cctgtagggc cgctgatccg
     8041 cggcagtggt tttgcccgtg atttgcgctt tgatcacccc tacgccgact acggcaatat
     8101 tccaaaaaca ctgtttacct tcaccggcgg cgatgttttc tcccgcgtga tggtccgtgt
     8161 caaagagacg tttgattcgc tggcaatgct ggaatttgcc ctcgacaaca tgccggatac
     8221 cccactgctg accgaaggct ttagctataa acctcacgca ttcgcgctgg gctttgttga
     8281 agcgccacgc ggtgaagacg tgcactggag catgctcggt gataaccaaa aattgttccg
     8341 ctggcgctgc cgtgccgcca cctacgccaa ctggccggtg ttgcgttaca tgctgcgcgg
     8401 caataccgtt tctgacgcac cgctgattat cggtagcctt gatccctgct actcctgtac
     8461 cgaccgtgtg acgctggtag atgtgcgcaa gcgccagtca aaaaccgtgc cgtataaaga
     8521 gatcgaacgc tacggcattg atcgtaaccg ttcgccgctg aagtaaggac agaagatgct
     8581 gaagttactg aaaactatta tgcgcgccgg aaccgcgacg gtgaaatatc ccttcgcgcc
     8641 actggaggtc agcccaggct ttcgcgggaa accggacctg atgcccagcc aatgtattgc
     8701 ctgcggcgcc tgtgcttgtc cggcaaatgc gctgactatc cagaccgacg accagcaaaa
     8761 ttcgcgcacc tggcagctct atctggggcg ttgtatttac tgcggacgtt gtgaagaagt
     8821 gtgcccgacc agagccatcc agcttaccaa taactttgaa ctgaccgtca ccaataaagc
     8881 cgatctctat acccgcgcga cgttccatct acaacgttgc agccgttgcg aacgcccgtt
     8941 tgccccgcaa aaaaccgtcg cactggctgc tgaattgttg gcacagcaac aaaatgcgcc
     9001 acaaaaccgc gaaatgttgc gggcgcaagc gagcgtctgc ccggagtgca aacaacgcgc
     9061 gacgctgatc aacgacgata cagatgtacc gctggtggct aaggagcagc tatgagtcca
     9121 gtgcttacac aacatgtcag ccagcccatc acgctggatg agcaaacgca aaagatgaag
     9181 cggcatttgc tacaggatat ccgtcgctca gcctacgttt atcgcgtcga ttgcggcggc
     9241 tgcaacgcct gtgaaatcga aatttttgct gccatcaccc ccgtattcga cgcagaacgt
     9301 tttggcatta aggttgtttc atcaccgcgt cacgccgata ttttgttatt tactggcgca
     9361 gtcacccggg cgatgcgtat gcctgcactt cgggcgtatg agtctgcccc cgatcataaa
     9421 atctgtgttt cctacggcgc gtgcggtgtc ggcggcggta ttttccacga tctctacagc
     9481 gtctggggcg gcagcgacac cattgtcccc attgatgttt ggatccccgg ctgcccgcca
     9541 acaccggccg ccaccattca cggtttcgcc gtggcgctcg gtttgctgca acagaagatt
     9601 cacgctgtgg attatcgcga tcccaccggg gtgactatgc aaccgttgtg gccacagatc
     9661 ccgccatcac agcgtatcgc cattgagcga gaagcgcggc ggctggcggg ctatcgtcag
     9721 gggcgagaaa tttgcgatcg gctcctgcgc catttaagcg acgatcctac aggaaatcgg
     9781 gttaacacct ggttgcgcga tgccgacgat ccacgtctca atagtatcgt tcagcaactc
     9841 tttcgcgtac tccgggggtt acatgactga agagtgcggg gaaattgttt tctggacgct
     9901 gcgaaaaaag tttgtcgcca gtagcgacga gatgccggaa caccgctctc aggtaatgta
     9961 ttactcgctg gctatcggcc atcacgttgg cgtgattgat tgtctgaatg tcgccttccg
    10021 ctgcccactg acggaaaacg aagattggct tgcacaggtc gaagaggagc aagcccgacg
    10081 taagatgctg ggggtgatga cctttggtga gattgttatt gacgccagcc acaccgccct
    10141 gttgacccgg gcattcgcgc tactggcaga tgacgcgacg tctgtgtggc aggcgcgtag
    10201 cattcaattc attcatctgt tggatgaaat tgtgcaggaa ccggccatct atctgatggc
    10261 cagaaaaatt gcgtgagaag gatttctcat taataaggac tgttgatggc tatgtcagac
    10321 gaggcgatgt ttgccccgcc acaaggaata acaattgaag cggtaaacgg aatgctcgcg
    10381 gagcggttag cacagaaaca cggtaaggcg tctttattac gcgccttcat cccgatgccg
    10441 ccgccgttca gcccggtaca acttattgaa ctgcatgtta tcaaaagcaa cttctattac
    10501 cgctaccatg atgatggcag cgatgtgacg gcaacaacag agtatcaggg cgagatggtc
    10561 gattattcgc gtcacgccgt ccttctcggc agtagtggaa tggcggagct acgctttatt
    10621 cgtacccacg gcagccgttt tactccctag gattgcacac tgtttaactg gctggcacgc
    10681 attatcactc cggttctgca atcatggctc aatgatgaag aacaacaggt ggcgctgcgt
    10741 ttgctggaga aagatcgcga tcatcatcgg gtactggttg atattactaa tgcagtgctg
    10801 tcacatcttg atctcgacga tctgatcgct gacgtcgctc gtgagatcca tcattttttc
    10861 ggtctggctt cagtcagtat ggtactgggc gatcatcgaa agaacgagaa gtttagcctg
    10921 tggtgcagcg atctttctgc ctcacattgt gcgtgtctgc cacgcaatat gcctggcgac
    10981 agtgtattgc tgacacaaac gctacaaacc cgacaaccga ccttgacgca ccgtgcagac
    11041 gatctgtttc tctggcaacg cgacccgtta ttactcttac ttgcatctaa cggctgcgaa
    11101 tctgcgctcc ttataccgct tacctttggc aaccatacac cgggtgcatt gttgctggcg
    11161 catacctctt ccactctctt tagtgaggaa aactgccagc tactacaaca catagccgat
    11221 cgcatcgcta ttgccgttgg caatgccgat gcctggcgta gcatgaccga tttgcaggaa
    11281 agtttgcagc aagaaaacta ccagcttagc gagcagctcc tttcgaatct gggcatcggt
    11341 gacattatct atcaaagcca ggcaatggaa gacctgctcc agcaggtaga tattgtagcg
    11401 aagagcgaca gtacggtgtt gatttgtggt gaaaccggaa ccggcaaaga ggtgatcgcc
    11461 agagcgctcc atcaacttag cacgcgacgc gacaaaccgc tggtcaaaat caactgcgct
    11521 gccatccccg ccagtcttct ggaaagtgag ttattcggtc atgacaaagg ggcgtttact
    11581 ggtgcgatta atacacatcg tggtcgtttt gaaattgccg atggcggcac gttgtttctc
    11641 gatgaaattg gcgatctgcc gttagaactt cagcctaaac tgctgcgcgt attgcaggaa
    11701 cgggagattg agcgtctcgg cgggagtaga acgatcccgg tgaatgtcag agtcattgcc
    11761 gccaccaacc gtgatttgtg gcaaatggtt gaagatcgcc agtttcgcag caatctcttt
    11821 tatcgcctga atgtcttccc attggaattg ccgccgctac gcgaccgtcc ggaagatatc
    11881 cctcttttag caaaacattt cacgcaaaaa atggcgcgcc atatgaatcg cgcaattgac
    11941 gccatcccga ccgaggcgct acgccagttg atgtcgtggg actggccggg caacgtgcac
    12001 gagctggaaa acgtgattga gcgagcggta ctgctgactc gcggtaacag tctgaattta
    12061 catcttaatg tccgacaaag ccgtttactg ccgacgctaa atgaagattc agcgcttcgc
    12121 agttcaatgg cgcagttgct gcacccgacg acgccagaga atgacgaaga agaacgtcag
    12181 cgcattgttc aggtattgcg agaaaccaat ggcattgttg ccgggccccg tggcgcggcg
    12241 acacgattag ggatgaagcg caccacgctg ctgtcacgaa tgcagcgtct ggggatctcg
    12301 gttcgcgagg tgttgtaatc tgcttttgca ggagtatgca tgagaaacaa actctctttc
    12361 gacttgcagt tgagcgccag aaaagcggca atcgctgaac ggattgccgt ccataaaatt
    12421 gcccgcagta aagtgtcggt ctttttaatg gcgatgtccg ctggcgtgtt tatggcgatc
    12481 ggatttactt tttacctttc cgttatcgcc gatgccccgt cttcacaggc attaacccat
    12541 ctggtgggcg gcctttgctt tacactcggc tttattttgc tggcggtttg cggcacagcc
    12601 tgttcacctc gtcggtaatg acggtgatag caaaaagtcg gggcgttatt agttggcgaa
    12661 cttggctgat taacgcactt ctggtggcct gtggtaatct ggcaggtatt gcctgtttca
    12721 gtttgttaat ctggttttcc gggctggtga tgagtgaaaa cgcgatgtgg ggagtcgcgg
    12781 ttttacactg cgccgagggc aaaatgcatc atacatttac tgaatctgtc agcctcggca
    12841 ttatgtgcaa tctgatggtt tgcctggcgc tgtggatgag ttattgcggg cgttcgttat
    12901 gcgacaaaat cgtcgccatg attttgccca tcaccctgtt tgtcgccagt ggctttgagc
    12961 actgtatcgc caatttgttt gtgattccgt tcgccattgc cattcgccat ttcgcccccc
    13021 ccttctggca actggcgcac agtagcgcag acaattttcc ggcactgacg gtcagccatt
    13081 ttattaccgc caatctgctc ccggtgatgc tgggtaatat tatcggcggt gcagtgctgg
    13141 tgagtatgtg ttatcgggct atttatttac gtcaggaatc ctgaaaaatc agcccggcga
    13201 aacagttcgt cgggctgaag attattcttg cgcgatttgc ccatcgggcc aggcgtggat
    13261 cacggctttg atcagcgtcg ccaatggaat ggcgaagaat acgccccaga atccccacaa
    13321 accaccgaag atcaccaccg ataaaataat caccagcgga tgcaggttaa ccgcttcgga
    13381 gaacaacacc ggtactagca ggttgccgtc cagcgcctga ataatcagat acaccgcgaa
    13441 gcagctccag aattccgtgc ctgcgccaaa ctggaatagc gccacgccaa ccaccggaat
    13501 ggtcaccaca aatgcgccaa tgtacggaat aagaaccgag aagccgacca gcaccgccag
    13561 cagcagcgaa tagttcagcc caaagagcaa gaaccccagc caggtggcga tccccaccac
    13621 gatcatctcc agcactttgc cgcggatata gttggtgatt tgttgattca tctccttcca
    13681 cacctgtcct gccagtccac ggttgcgcgg cagcacccga cgaacggcgt tcagcatctg
    13741 ctctttgtct ttcagcagga agaagaccat caatggcacc agcaccagat agacggcaat
    13801 ggtcagcaaa ccgaccagcg aggcgaggga aattttcacc accgaatcgc ccatggtcag
    13861 catccgactg cgcatatttt cggccattgc atcaataatg cccgcgtcca ttaacgccgg
    13921 atagcggcgc ggcaacgtgg cggcaaagtc agaaagctta ttgagcatcc ccggcatatc
    13981 gcggattaag tagatgccct gttgccaggc gataggcagt accacgaacg ccatcagtag
    14041 caatataccg acaaaaacca ccaatacaat cgacgtcgcc cagcggcggg agcagccaat
    14101 agattgcagg cgcacggttg gccattccag caaataggcc agcacaatag ccaccagcaa
    14161 cggagcaagc aggccactaa agaaaaagat aatgccaaat ccggcaacta aaataaccag
    14221 caaggcaatc gcttccgggt cgctaaaacg gcggcgatac cattgcatca acatttcgag
    14281 cataaaaacc ttccctgaac ctcaagagcg ggattgcgat ccgcaattgt atcgaaatgt
    14341 cacaaaaaag acttcgcttt ttatgacgga ttcaggaaac tgaaaagtca tttgagtggg
    14401 ctaatcttcg ccgttacact caaaggcggc gcggtgggaa cgatatttca cagtatcggt
    14461 caaatgacta tcttcagaaa tacaggatag aggttatgtt caggcagttg aaaaaaaacc
    14521 tggttgcaac cctcattgct gctatgacca ttggtcaggt agccccggcg tttgccgaca
    14581 acgcagacac cttgccggat atgggaacct ccgcaggaag cacgctttcc attggtcagg
    14641 aaatgcagat gggcgactat tatgtccgcc agctacgcgg cagcgcgccg ttaattaatg
    14701 acccgctgtt aacgcaatat attaattcgc tggggatgcg tctggtttcg catgccaatt
    14761 cggttaagac accgtttcat ttttttctaa tcaacaacga cgaaattaac gcctttgctt
    14821 tctttggcgg caacgtggtg ctgcactctg ccctgttccg ttattccgat aacgaaagtc
    14881 aactggcttc agttatggcg cacgaaatct cccacctcac ccaacgtcac ctggcgcgag
    14941 cgatggaaga tcagcagcgc agcacgccgc tgacctgggt cggcgcgtta ggttctattt
    15001 tactggcgat ggccagtccg caggcgggga tggcggcgct gaccggtaca ctggcgggaa
    15061 cgcgtcaggg gatgatcagt ttcacccagc aaaatgaaca ggaagcggac cgcattggta
    15121 ttcaggtgct gcaacgctcg ggattcgatc cgcaggcgat gccaaccttc ctcgaaaaat
    15181 tactcgatca ggcgcgttac tcctcgcgcc cgccggaaat tttattgact cacccgttgc
    15241 cggaaagtcg tctggcagat gcccgcaacc gtgctaatca gatgcgaccg atggtggtgc
    15301 agtcgtcgga agatttctat ctggcgaaag cgcgcacact ggggatgtat aattccggac
    15361 gtaaccagct caccagtgat ttgctggatg aatgggcgaa aggaaacgtt cgtcagcaac
    15421 gagcggcgca atatggtcgt gctttacagg cgatggaagc caataaatac gacgaggcgc
    15481 gtaaaacgct gcaaccgtta ctggcggcag aacctggcaa cgcatggtat ctcgatctgg
    15541 ctaccgatat cgatcttggg caaaacaaag ccaatgaggc aatcaatcgc ctgaaaaatg
    15601 cccgtgattt gcgcaccaat ccggtgttgc agctcaacct ggcaaacgct tatctgcaag
    15661 gcggtcaacc acaagaagcg gccaatattc tcaatcgcta cacctttaat aataaagatg
    15721 acagcaacgg ctgggattta ctggcacagg cggaagccgc gctaaataac cgcgatcagg
    15781 agctggctgc gcgagcagaa ggttatgcgc tcgccggacg actcgatcag gccatttcgc
    15841 tgttgagtag cgccagttcg caggtgaaat taggcagcct gcaacaagcg cgttacgatg
    15901 cgcgcatcga ccagttgcgc cagctgcagg aacgctttaa gccttatacc aagatgtaat
    15961 tcgcattaaa ggaagaacaa tgaccaaaca ggtaaaaatc taccataacc cacgctgttc
    16021 aaagagccgg gaaacgctga acctgctgaa agaaaacggc gtggagccag aagtggtact
    16081 ctaccttgag acacccgccg atgcggcaac gctgcgcgat ttgctgaaaa tgctggggat
    16141 gaatagcgcc cgtgaattga tgcgccagaa agaggatctt tataaagaac tgaacctggc
    16201 tgacagttcg cttagcgaag aggcgctgat tcaggcaatg gtggataatc cgaagctgat
    16261 ggagcgcccg attgtggtcg cgaatggcaa agcgcggatt ggtcgtccac cggagcaggt
    16321 actggaaatc gtgggttaag atgtgctcca tcgctagttg aagcacattg ccggatgcga
    16381 cgcttgccat gtcttatccg gcctacgaat actatggatt aacttcgcgt agttcggata
    16441 aggcgttcgc gccgcatccg acaataaaca ccttatctac aacttcagaa tttctttcac
    16501 aaacggaatg gtcagcttac gttgcgcggt aatcgacgca cgatccaact gatccaacgt
    16561 cataaatagc gtgcgcattt ctctgtcgag ccgcttcagc aagaaacgcc ccacatcttc
    16621 cggcagttca aaaccacgca aacgcgcgcg taactgtagc gcctgcaact tatcttcatc
    16681 agaaagtggc tgcaatttgt agatctgccc ccagtcgagt cgcgacgcga gatccggtaa
    16741 tcccagattc aactgccgcg gtggacgatc gccggtgatc aacaaccgtg ttttgcccga
    16801 ttccagaatt cgattgtaga gatcgaaaat cgccatctcc cacaactcat cgcctgcaat
    16861 acactcaatg ttgtcgatac aaaccagcga caaatgctcc ataccgtcga gcacttccgg
    16921 aacaaaccaa gtgcgtttat ccagcgggac atagcccacc gcatcgccac gctgcgacaa
    16981 ttccgcgcaa gccgcgtgca gcagatggct gcgccccgcg ccttcgcgtg cccagagata
    17041 gatgtaaccg ctatgttcct gacgcagcac gttttgcagc gcggccagta aagaggagtt
    17101 atcccccggc cagaaacttg caaaggtttc gtcgtcagga agataaagtg gcaaagagag
    17161 ctgtgccggt gtgttcagag atacctcaac caggatttca caaaatcgcg agaagtttac
    17221 cacagaatcc catgatgttt gaaccgggca gcaacactgc ccggtcggta cattatttgt
    17281 ctgttatatc cgcctcttct gcgtccagca ccacttcttc agggcgcagc acactgatca
    17341 gtttgaaaat caaacttaag ccgataccga cgatggtcgc cagcgccata ccttttaact
    17401 ccgccgcgcc gatgtttacc ttcgcgccac tgacgccgat gatcaaaatc acggaagtca
    17461 ggatcaggtt ctgtgctttg ttgtaatcca ctttcgattc gatcaaaaca cgaataccgg
    17521 aagcaccgat gacaccataa agcagcagcg aaacgccgcc catcaccggc aatgggatca
    17581 tctggatagc ggcagccagt ttaccgacgc aggaaagcag gatagcgaaa atcgccgccc
    17641 cgccgataac ccaggtactg taaacacggg tgatcgccat cacgccaatg ttttctccgt
    17701 aagtggtatt tggcgtggag ccaaagaagc cggagatcac ggtcgacagg ccgttagcaa
    17761 acatcgaacg gtgcagacct ggatcgcgca gcagatcttt tttgacgata ttagccgtta
    17821 ctaccaggtg ccctacgtgt tcggcaataa ccactaacgc cgctggcaga atagtcagaa
    17881 tggcaaacca ctcgaagcgc ggcgtataga gggttggcag cgcaaaccag tgagcattaa
    17941 taatcggcgt ggtatcgaca attcccattg cgaaagagag cgcgtagccc accagcacgc
    18001 caattaaaat cgggataatt gccaggaaac cacgaaacag cacggaacct aaaaccgtga
    18061 ccgccagggt ggtaatagag atgatgatgg ttttggagtc tggcgtttgc ccttcagccg
    18121 ggagtaaacc cgccataccg gcagctacgc ccgccagctc cagaccgatg acggcaacga
    18181 ttgcgcccat tgccgcaggt ggaaacagca cgtccagcca gccggtcccc gctttcttca
    18241 cgataaaaga aaccaggcag aacagcacgc cgcacataat aaagccgccc agcgcgactt
    18301 cataccctaa cggcaacagt aacaataccg gtgaaataaa ggcaaagctg gaaccaagat
    18361 aagccggaat tttcccttta cagatgaaga gatacagcag cgttccaata ccgttaaata
    18421 acagtacagt cgccgggtta atatgaaata agacgggcac caggacggtt gcaccaaaca
    18481 tggcgaacaa atgttgcaaa ctaagcggga ttgtctgtaa aagtggcggt ctttcactca
    18541 ccccgatagc acggcgcgtc atagtattat cctctgtatt atgtgttata ggcgctttac
    18601 tcaaaaaaaa gccgactctt aaagtcggct ttaattattt ttattcttta tttcgtacca
    18661 aagattttgt caccggcatc gccgaggccc ggaataatgt atccgtgctc gttcagtccc
    18721 tgatcaatcg atgcggtata cagttcgacg tccgggtgcg ctttttccag cgcagcgata
    18781 ccttctggcg cagcgaccag caccagaact ttgatgctgc tgcagcccgc ttttttcagc
    18841 aggtcgatgg tcgcgataac ggaaccaccg gttgccagca ttgggtcaac gatcagcgcc
    18901 atacgctcat cgatgttaga aaccagtttc tggaagtacg gtaccggctc cagcgtttct
    18961 tcattacggt acataccgac aacgctgatg cgcgcgctcg gaacattttc cagcacaccg
    19021 tccatcatac caagacccgc acgcagaatt ggcacaacgg taattttctt acctttgatc
    19081 tggtcgattt ctaccgggcc gttccagcct tcgatagtta ctttttccgt ttcgaggtcg
    19141 gcggtcgctt cgtaagtcag caggctaccc acttcggaag cgagttcgcg aaagcgcttg
    19201 gtgctgatat cttgctcacg catcagtccc agcttgtgtt tgacgagtgg gtgtttgact
    19261 tccacgatct tcatactctt tctcctttga ggggcagcca caaaaaaatc gacggattat
    19321 acctcctttc ttcaaggcgg caatattctt ttcgttgact ttagtcaaaa tgataacgat
    19381 ttgagataaa gttattttat attcaaatgg ttatgaaaga agatcattcc atccgaaaac
    19441 taacctttgc cctggcacaa gtcttctttc gccgcgcgtc tggggaaaag acgtgcaaaa
    19501 aggttgtgca aagcagcctc gcaaacgttt gctttccctg ttagaattgc gccgaatttt
    19561 atttttctac cgcaagtaac gcgtggggac ccaagcagtg accgataaaa cctctcttag
    19621 ctacaaagat gccggtgttg atattgacgc gggtaatgct ctggttggaa gaatcaaagg
    19681 cgtagtgaag aaaacgcgtc gtccggaagt gatgggcggt ctgggcggct tcggtgcgct
    19741 gtgtgcattg ccgcaaaaat atcgtgaacc cgtgctggtt tccggcactg acggcgtagg
    19801 taccaagctg cgtctggcaa tggacttaaa acgtcacgac accattggta ttgatctggt
    19861 cgccatgtgc gttaatgacc tggtggtgca aggtgcagaa ccgctgtttt tcctcgacta
    19921 ttacgcaacc ggaaaactgg atgttgatac cgcttcagcg gtgatcagcg gcatcgcgga
    19981 aggttgtctg caatcgggct gttcactggt gggtggcgaa acggcagaaa tgccggggat
    20041 gtatcacggt gaagattacg atgtcgcggg tttctgcgtg ggcgtggtag aaaaatcaga
    20101 aatcatcgac ggctctaaag tcagcgacgg cgatgttctg attgcactcg gttccagcgg
    20161 tccgcactcg aacggctatt cgctggtgcg caaaattctt gaagtcagcg gttgtgatcc
    20221 gcaaaccacc gaacttgatg gtaagccatt agccgatcat ctgctggcac cgacccgcat
    20281 ttacgtgaag tcagtgctgg agttgattga aaaggtcgat gtgcatgcca ttgcgcacct
    20341 gaccggcggc ggcttctggg aaaacattcc acgcgtattg ccagataata ctcaggcagt
    20401 gattgatgaa tcttcctggc agtggccgga agtgttcaac tggctgcaaa cggcaggtaa
    20461 cgttgagcgc catgaaatgt atcgcacctt caactgcggc gtcgggatga ttattgccct
    20521 gcctgctccg gaagtggaca aagccctcgc cctgctcaat gccaacggtg aaaacgcgtg
    20581 gaaaatcggt atcatcaaag cctctgattc cgaacaacgc gtggttatcg aataatgaat
    20641 attgtggtgc ttatttccgg taacggaagt aatttacagg caattattga cgcctgtaaa
    20701 accaacaaaa ttaaaggcac cgtacgggca gttttcagca ataaggccga cgcgttcggc
    20761 cttgaacgcg cccgccaggc gggtattgca acgcatacgc tcatcgccag cgcgtttgac
    20821 agtcgtgaag cctatgaccg ggagttgatt catgaaatcg acatgtacgc acccgatgtg
    20881 gtcgtgctgg ctggttttat gcgcattctc agcccggcgt ttgtctccca ctatgccggg
    20941 cgtttgctga acattcaccc ttctctgctg ccgaaatatc ccggattaca cacccatcgt
    21001 caggcgctgg aaaatggcga tgaagagcac ggtacatcgg tgcatttcgt caccgatgaa
    21061 ctggacggtg gcccggttat tttacaggcg aaagtcccgg tatttgctgg tgatacggaa
    21121 gatgacgtca ccgcccgcgt gcaaacccag gaacacgcta tttatccact ggtgattagc
    21181 tggtttgccg atggtcgtct gaaaatacac gaaaacgccg cgtggctgga tggtcaacgt
    21241 ctgccgccgc agggctacgc tgccgacgag taatgccccc gtagttaaag cgccagctct
    21301 gccgctggcg tttttcaatt cacctgtaaa tcgcaagctc cagcagtttt tttccccctt
    21361 ttctggcata gttggacatc tgccaatatt gctcgccata atatccaggc agtgtcccgt
    21421 gaataaaacg gagtaaaagt ggtaatgggt caggaaaagc tatacatcga aaaagagctc
    21481 agttggttat cgttcaatga acgcgtgctt caggaagcgg cggacaaatc taacccgctg
    21541 attgaaagga tgcgtttcct ggggatctat tccaataacc ttgatgagtt ctataaagtc
    21601 cgcttcgctg aactgaagcg acgcatcatt attagcgaag aacaaggctc caactctcat
    21661 tcccgccatt tactgggcaa aattcagtcc cgggtgctga aagccgatca ggaattcgac
    21721 ggcctctaca acgagctatt gctggagatg gcgcgcaacc agatcttcct gattaatgaa
    21781 cgccagctct ccgtcaatca acaaaactgg cttcgtcatt attttaagca gtatctgcgt
    21841 cagcacatta cgccgatttt aatcaatcct gacactgact tagtgcagtt cctgaaggat
    21901 gattacacct atctggcggt ggaaattatc cgtggagaca ccatccgtta cgcgctgctg
    21961 gagatcccat cagataaagt gccgcgcttt gtgaatttac cgccagaagc gccgcgtcga
    22021 cgcaagccga tgattcttct ggataacatt ctgcgttact gccttgatga tattttcaaa
    22081 ggcttctttg attatgacgc gctgaatgcc tattcaatga agatgacccg cgatgccgaa
    22141 tacgatttag tgcatgagat ggaagccagc ctgatggagt tgatgtcttc cagtctcaag
    22201 cagcgtttaa ctgctgagcc ggtgcgtttt gtttatcagc gcgatatgcc caatgcgctg
    22261 gttgaagtgt tacgcgaaaa actgactatt tcccgctacg actccatcgt ccccggcggt
    22321 cgttatcata attttaaaga ctttattaat ttccccaatg tcggcaaagc caatctggtg
    22381 aacaaaccac tgccgcgttt acgccacatt tggtttgata aagcccagtt ccgcaatggt
    22441 tttgatgcca ttcgcgaacg cgatgtgttg ctctattatc cttatcacac ctttgagcat
    22501 gtgctggaac tgctgcgtca ggcttcgttc gacccgagcg tactggcgat taaaattaac
    22561 atttaccgcg tggcgaaaga ttcacgcatc atcgactcga tgatccacgc cgcacataac
    22621 ggtaagaaag tcactgtggt ggttgagtta caggcgcgtt tcgacgaaga agccaacatt
    22681 cactgggcga agcgcctgac cgaagcaggc gtgcacgtta tcttctctgc gccggggctg
    22741 aaaattcacg ccaaactgtt cctgatttca cgtaaagaaa acggtgaagt ggtccgttac
    22801 gcacacatcg ggaccgggaa ctttaacgaa aaaaccgcgc gtctttatac tgactattcg
    22861 ttgctgaccg cagatgcgcg tatcaccaac gaagtacggc gggtatttaa ctttattgaa
    22921 aacccatacc gcccagtgac atttgattat ttaatggtgt caccgcaaaa ctctcgccgt
    22981 ctgttatatg aaatggtaga ccgcgaaatc gccaacgcgc agcaagggct gcccagtggt
    23041 atcaccctga agctaaataa ccttgtcgat aaaggcctgg ttgatcgtct gtatgcggcc
    23101 tccagctccg gcgtaccggt taatctgctg gttcgcggaa tgtgttcgct gatccccaat
    23161 ccggaaggca ttagcgacaa cattcgtgcc atcagtattg ttgaccgtta ccttgaacat
    23221 gaccgggttt atatttttga aaatggcggc gataaaaagg tctacctttc ttccgccgac
    23281 tggatgacgc gcaatattga ttatcgtatt gaagtggcga caccgctgct cgatccgcac
    23341 ctgaagcagc gggtgctgga catcatcgac atattgttca gcgatacggt caaagcacgt
    23401 tatatcgata aagaactcag taatcgctac gttccccgcg gcaatcgccg caaagtacgg
    23461 gcgcagttgg cgatttacga ctacatcaaa tcactcgaac aacctgaata accctatgcc
    23521 aatacacgat aaatcccctc gtccgcagga gtttgctgcg gtcgatcttg gttcaaacag
    23581 ttttcacatg gtcatagccc gtgtggtaga tggtgccatg cagattattg gccgcctgaa
    23641 acagcgagtg catctggcgg acggcctggg gccagataat atgttgagtg aagaggcaat
    23701 gacgcgcggt ttgaactgtc tgtcgctgtt tgccgaacgg ctacaagggt tttctcctgc
    23761 cagcgtctgt atagtcggca cccatacgct gcgtcaggcg ctgaacgcca ctgactttct
    23821 gaaacgcgtg gaaaaggtca ttccctaccc gattgaaatt atttccggta atgaagaagc
    23881 ccgtctgatt tttatgggcg tggaacatac ccaaccggag aaaggtcgca aactggttat
    23941 tgatattggc ggcggatcta cggaactggt gattggtgaa aatttcgaac cgattctcgt
    24001 tgaaagccgc cggatgggtt gtgtcagctt tgcccagctt tacttccctg gcggggtcat
    24061 caataaagag aattttcagc gcgctcgtat ggcggcagca caaaaactgg aaactttaac
    24121 ctggcaattc cgtattcagg gctggaacgt ggcaatgggc gcttccggta ccataaaagc
    24181 cgcccatgaa gtgttaatgg aaatgggcga gaaagacggg ataattaccc cggaacgtct
    24241 ggaaaaactg gtaaaagaag ttttacgtca ccgtaatttc gcatcgctga gtttaccggg
    24301 tctttccgaa gagcggaaaa cagtcttcgt tcctggactg gcgattttat gcggtgtgtt
    24361 tgatgcttta gccatccgtg aactgcgcct ttctgacggg gcgttacgcg aaggcgtact
    24421 gtacgaaatg gaaggacgtt tccgtcatca ggatgtgcgt agtcgcaccg ccagcagcct
    24481 cgccaaccag tatcacatcg acagcgaaca ggcccgacgg gtgctggata ccactatgca
    24541 aatgtacgaa cagtggcggg aacagcaacc gaagctggcg catccgcaac tggaggcgct
    24601 actgcgatgg gccgccatgc tgcatgaggt cgggttgaat atcaaccaca gcggtttgca
    24661 tcgccactcc gcttatattc tgcaaaacag tgacttgccg ggttttaatc aggaacagca
    24721 gctgatgatg gcgacactgg tgcgctatca ccgcaaagcg attaaactcg acgatctgcc
    24781 gcgctttacc ttgtttaaga agaaacagtt cctgccactg attcagctat tgcgccttgg
    24841 cgtattactc aacaatcaac gtcaggcaac caccacaccg ccaacattga cactgattac
    24901 tgatgacagt cactggacac tgcgtttccc gcatgactgg tttagtcaga atgcgttggt
    24961 actgcttgat ctggaaaagg agcaagaata ctgggaaggc gtggctggct ggcggttgaa
    25021 aattgaagaa gaaagtacac ctgaaatcgc cgcttaatgc tttgcgggcc gacgagaaat
    25081 gtcggcccgc attattcagg cactttcgcg aatgggttcg a
//
LOCUS       DAJVUK010000046        24914 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.046, whole genome shotgun sequence.
ACCESSION   DAJVUK010000046 DAJVUK010000000
VERSION     DAJVUK010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24914
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.046"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(38..376)
                     /locus_tag="OQQ57_001773"
                     /pseudo
     CDS             complement(38..376)
                     /locus_tag="OQQ57_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(492..1043)
                     /gene="maa"
                     /locus_tag="OQQ57_001774"
     CDS             complement(492..1043)
                     /gene="maa"
                     /locus_tag="OQQ57_001774"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HCS1956569.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKGVPDNVVVGGNPARIIKKL"
     gene            complement(1215..1433)
                     /gene="hha"
                     /locus_tag="OQQ57_001775"
     CDS             complement(1215..1433)
                     /gene="hha"
                     /locus_tag="OQQ57_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HCS1956570.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            complement(1459..1833)
                     /gene="tomB"
                     /locus_tag="OQQ57_001776"
     CDS             complement(1459..1833)
                     /gene="tomB"
                     /locus_tag="OQQ57_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HCS1956571.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNYGWVNDPTSAI
                     NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK
                     SGNRLFRCFVNATKENPASLSC"
     gene            complement(2379..5528)
                     /locus_tag="OQQ57_001777"
     CDS             complement(2379..5528)
                     /locus_tag="OQQ57_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HCS1956572.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            complement(5551..6744)
                     /gene="acrA"
                     /locus_tag="OQQ57_001778"
     CDS             complement(5551..6744)
                     /gene="acrA"
                     /locus_tag="OQQ57_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HCS1956573.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDNKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTAPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            6886..7533
                     /gene="acrR"
                     /locus_tag="OQQ57_001779"
     CDS             6886..7533
                     /gene="acrR"
                     /locus_tag="OQQ57_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HCS1956574.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            7661..11023
                     /gene="mscK"
                     /locus_tag="OQQ57_001780"
     CDS             7661..11023
                     /gene="mscK"
                     /locus_tag="OQQ57_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HCS1956575.1"
                     /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
                     ADLQAQLDSLNKQKDLSAQDKLELQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
                     RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
                     LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
                     EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
                     VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
                     SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
                     AGLPLLLIVGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
                     HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
                     WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
                     FALFGVMFWAIWSDLITVFSYIDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
                     RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
                     NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
     gene            complement(11235..11396)
                     /gene="rsmS"
                     /locus_tag="OQQ57_001781"
     CDS             complement(11235..11396)
                     /gene="rsmS"
                     /locus_tag="OQQ57_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HCS1956576.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(11410..11937)
                     /gene="priC"
                     /locus_tag="OQQ57_001782"
     CDS             complement(11410..11937)
                     /gene="priC"
                     /locus_tag="OQQ57_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HCS1956577.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRTT
                     TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            12007..12384
                     /locus_tag="OQQ57_001783"
     CDS             12007..12384
                     /locus_tag="OQQ57_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HCS1956578.1"
                     /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
                     VILACLLFYMWRIPVIDEKQEKH"
     gene            12537..13088
                     /gene="apt"
                     /locus_tag="OQQ57_001784"
     CDS             12537..13088
                     /gene="apt"
                     /locus_tag="OQQ57_001784"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HCS1956579.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITSYSLVPFPGH"
     gene            13217..15088
                     /gene="dnaX"
                     /locus_tag="OQQ57_001785"
     CDS             13217..15088
                     /gene="dnaX"
                     /locus_tag="OQQ57_001785"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HCS1956580.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVPSALEKAP
                     AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAARVS
                     QLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSTLKGSTVEL
                     TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI"
     misc_feature    14481..14545
                     /gene="dnaX"
                     /locus_tag="OQQ57_001785"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00382"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="DnaX frameshifting element; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00382"
     gene            15141..15470
                     /locus_tag="OQQ57_001786"
     CDS             15141..15470
                     /locus_tag="OQQ57_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HCS1956581.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            15470..16075
                     /gene="recR"
                     /locus_tag="OQQ57_001787"
     CDS             15470..16075
                     /gene="recR"
                     /locus_tag="OQQ57_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HCS1956582.1"
                     /translation="MQTSPLLTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            16185..18059
                     /gene="htpG"
                     /locus_tag="OQQ57_001788"
     CDS             16185..18059
                     /gene="htpG"
                     /locus_tag="OQQ57_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HCS1956583.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            18240..18884
                     /gene="adk"
                     /locus_tag="OQQ57_001789"
     CDS             18240..18884
                     /gene="adk"
                     /locus_tag="OQQ57_001789"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007706188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HCS1956584.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            19016..19978
                     /gene="hemH"
                     /locus_tag="OQQ57_001790"
     CDS             19016..19978
                     /gene="hemH"
                     /locus_tag="OQQ57_001790"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HCS1956585.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTCEL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEYIEMMANLVAAYR"
     gene            complement(19975..20934)
                     /gene="aes"
                     /locus_tag="OQQ57_001791"
     CDS             complement(19975..20934)
                     /gene="aes"
                     /locus_tag="OQQ57_001791"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HCS1956586.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
                     TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKIVGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
                     QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL"
     gene            21086..22390
                     /gene="gsk"
                     /locus_tag="OQQ57_001792"
     CDS             21086..22390
                     /gene="gsk"
                     /locus_tag="OQQ57_001792"
                     /EC_number="2.7.1.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HCS1956587.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            complement(22523..24199)
                     /locus_tag="OQQ57_001793"
     CDS             complement(22523..24199)
                     /locus_tag="OQQ57_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HCS1956588.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(24437..>24914)
                     /gene="fsr"
                     /locus_tag="OQQ57_001794"
     CDS             complement(24437..>24914)
                     /gene="fsr"
                     /locus_tag="OQQ57_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fosmidomycin MFS transporter"
                     /protein_id="HCS1956589.1"
                     /translation="YYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGR
                     KYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGM
                     VSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD"
BASE COUNT         6227 a         6490 c         6396 g         5801 t
ORIGIN      
        1 aacaaatggt agtgtccgct attgccagta cacctcacag cgcggcaggt acaaagcgcg
       61 tgttgtacca ttcgccgtta tagcaaacgc ggaaatccag cacgtcgata tcttcatagc
      121 ggtagcgtgg gtagacatcg aaaaagaaga aaccattaag caggataaat aatacaacca
      181 gtagccagac agagcctgac agcgtttcgg actgcaacat caccgccagg gtggcaaaaa
      241 aagcaacgta cataccgata aacagccccg gatgtttacg gataaaactg atactaaagc
      301 ggggtttgtt gtcgcgtttt tcgcgggtat tcagagactc aatcgtttcg gtcagcaggc
      361 gttgtatttc ggtcatcgtt tgccttcgtg gtatctgcaa ctttccaggg aacaccctat
      421 tttaacgtgg gaatagtaga ggggaagtaa cagatctacc acaattttgc ataacagttg
      481 cgaaaaaccg attacaattt tttaattatt ctggctggat taccgcccac gacaacgttg
      541 tccgggacac cttttgtgac aactgcacct gaagctacca cgacgttatc accaatggtc
      601 acaccagggt taatgaccgc gcgtccgcca atccagacgt tattaccgat ggtgacgggt
      661 ttccccagtt cagcaccgct attacgtgct acagggtcga tgggatgtgt tgccgtgtag
      721 atatgaacgc ctggtgccaa catacagtta tcaccgatgc gaatagggca gacatcaagc
      781 atcacgcaat cgaagttggc gaaaaaatta ttgccgagaa aaatgttata gccataatca
      841 cagcgaaacg ttggctcaat ataagcctct gtcacctgac cgaataaatc agcgagaatt
      901 tgctggcgta atgtgtgctc ttccgccagg gaatgattgt atcggtgaat aagctgacga
      961 gcgcgcaggc gatcgcgaga taacgtctca tctgccgagc gatacaactc accagcaatc
     1021 atcttttctt tttctgtgct cattactgac ctccggttgc tgaaaatgcg gcaacacagt
     1081 aagacgaaaa gtcagtgaac agaacgttcc cattacatct gtgtgataaa gatcacatag
     1141 ggtatgtctt catggtgaaa aagtataaaa ttcttaataa acagccggtt atagctccga
     1201 aagcgaatta tttattagcg aataaatttc catactgagg aagggatctt gtcgtatagt
     1261 ttattcatgg tcaattcggc gaggcggtga tctgcggctg agtaaaatac cgccagttca
     1321 ttatctgata attcgtattt atttttctcg ataacacgct ccagcgtgtc aattgtctgg
     1381 caacgacgta aacgcattaa ataatcggtt ttcgttaaag gtttttcgga catacttcta
     1441 cccatggttg taataattct aacaagataa actcgcagga ttctctttcg tcgcattgac
     1501 aaaacaacgg aatagtcgat tacctgactt ccgccatttc tgaagatcct gcatattaat
     1561 accataacta ctgaacaaca taaaggtgtc atccagatat tcgtcgatct gctcaatgag
     1621 cttattgtct tcattatact taattttgta attaagtgcg aaggtcgcaa tatgctcaat
     1681 cagttcattc aactggaggt tgatcgccga ggttgggtcg ttaacccagc cataattgct
     1741 ttcttcaagg tttgcaaggc agtcatgata cagggtttca cagagaaact taagctgtgc
     1801 gatatcatgt cttttgggtg agtattcatc cataacgcgt ccccttctta gcggttgaac
     1861 taacggacac ctttcgggat ggaaaaaact tactgacctg gacttgccct ctcgtttgtt
     1921 agcttaacta taagccactc tttgcaggta ttcattgcat tattacgaaa aattacaatt
     1981 aggaaggaat cgggacagga ctcacttttt catactagca ctaacccgca gcaggtaaaa
     2041 gcagtttgct cgaactgttc ataacatttc aggattatcg ccagatgaaa ttggtgacac
     2101 taataccagg attgctctga atatgacgta ataaccgagg aatgaataaa gaattaccgc
     2161 aaataattaa gaatagcctc taaatgatta tggattatta aatctattag cgctacttaa
     2221 tataaattaa ctaacaatca gtatttttta tgaattttat ccgtggttaa tactggtttt
     2281 cgtatgagat cctgagttgg tggttcaatt actccttaat gttcgtaggt tatgcataaa
     2341 aaaggccgct tgcgcggcct tagtgattac acgttgtatc aatgatgatc gacagtatgg
     2401 ctgtgctcga tatcttcatt cttgcggcta aagcggcggc gaaccaccac aaagaatacc
     2461 ggaacgaaga agattgccag taccgttgcg gtcaccatcc cgcccattac accggtacct
     2521 actgcgttct gcgcgccgga accagcacca gtactgataa ccagcggcat aacgccgagg
     2581 ataaacgcca gcgaggtcat caggatcgga cgtaaacgca tccgcactgc atcaagcgtc
     2641 gcttcaatca gacctttacc ttctttatcc atcaagtctt tggcgaattc gacgataagt
     2701 atcgcgttct tcgccgacaa cccaatggtt gtgagcaggc ctacttggaa gtaaacgtca
     2761 ttggtcaggc cacggaaggt ggcagccagc aacgcaccga taacccccag cggaacgacc
     2821 agcataacgg agaacggaat cgaccagctc tcgtacagcg ccgctagaca caggaatacg
     2881 acaatcaacg aaatcgcgta cagtgaaggt gcctggttgc cggagaggcg ttcctgatag
     2941 gacatccccg tccagtcata gccaacaccg gtaggcagtt tgctcgccag ttgttccatt
     3001 agctccattg cttcaccggt acttttaccc ggtgccgcct ggcctaagat ttccatggat
     3061 ggcaggccat tgtaacgttc cagacgcggc gaaccgtact cccaacgaga agaggagaat
     3121 gccgagaacg gcaccatctg accatcagca gcacgaacat accagtcgcc gatatcatcc
     3181 ggcagcatac ggtatttcgc ttctgacatg acgtaaactt tcttcacacg accgcggtcg
     3241 ataaagtcgt tcacatagct accgccccat gcagcgccca gagtggtgtt aatgtcgttg
     3301 atagaaacac ccagcgcctg cgctttttcc tggtcgatat caatcttaaa ctgcggggta
     3361 tcttccagac cgtttggacg tacgctggtc aacatatcag gatgctttgc tgcttctgca
     3421 agcagctggt tacgcgcctg agtcagtttt tcgtgaccaa ggccagcctg gtcaatcagc
     3481 tcaaagtcaa agccggttgc agtacccagt tccacgattg cgggtaggtt aaaggcgaaa
     3541 accatcgcat ctttgatttg cgagaaagcg cgtgttgcac gcatggtaat cgcttcaact
     3601 ttgttttctt cgcccggacg atcggcccag tccttcaagg aaacgaacgc aataccggta
     3661 ttctgaccac gtcccgcaaa gccgaagccg ttaacggcga acaccgactc aacgttgttc
     3721 ttttctttgg tcagatagta atgcgttacc tcattgagca ctttctgcgt acgttcctgc
     3781 gttgcacctg ctggcagctg aaccatggtc ataaatacgc cctggtcctc atctggcaag
     3841 aaggagcttg gcagacgcac gaacagatag gccatgccga ccacgatgat cagatacagc
     3901 accaggtaac gccccgtact gcgcagaata ccgcctacgc tgtcggtgta gtggtgcgtg
     3961 ctcttctcga acatgcggtt aaaccagccg aagaagcctt ttttaccttc cccgtgatcg
     4021 cctttggcaa tcggtttcag catggtggca caaagagccg gagtcaggat caacgctacc
     4081 agtaccgaca gcgccattgc tgaaacaatg gtaatagaga actgacgata gatagcacca
     4141 gtagaaccgc caaagaaggc catcggtacg aataccgctg acagtaccat cgcgataccg
     4201 accagagcgc cctgaatctg ccccatcgac ttacgggtag cttcttttgg cggcaaacct
     4261 tcttccgcca taacacgctc cacgttttct accacaacga tagcgtcatc caccaacaag
     4321 ccgatggcga gcaccatccc gaacattgtt agcgtgttta tcgagaagcc aaaggcggca
     4381 aggacggcaa aggtcccgag caataccacc ggtacggcaa tggtcggaat caacgtcgcg
     4441 cggaagttct gcaggaacag atacataacc aggaacacga ggatgatcgc ttcgaccagc
     4501 gttttaacca cttcgtgaat agagattttc acgaacggcg tggtgtcgta cgggtaaaca
     4561 attttcagac ccgacgggaa gaacggttcc atcttcgcca gttcagcacg gattgccgca
     4621 gcggtatcca gcgcatttgc accggtcgcc agcttgatcc ccagaccgga agccggttgg
     4681 ccgttaaact ctgcgatgat gtcgtagttc tcaccaccca gctcaatctt cgccacatca
     4741 cgcagcagga cgcgggaacc atcctgattc actttcagca ggattttgcc gaactcttca
     4801 gtagaggtca gacgcgtctg agcaataata gaggcgttaa gctgttggcc tttcaccggc
     4861 ggcgtaccac cgagctgacc cgccgcaacc tgggcgttct gcgctttgat ggcggtaatg
     4921 acatcaaccg gcgttagctg gaatttgttc agctcattcg ggttcatcca gatacgcatc
     4981 gcgtactgtg aaccgaacaa ctgaacatca cccacgcccg acgtacggct gatggcatct
     5041 ttcatattcg ccgctacgta gtcagagata tcctcctgcg tcatggtgcc atcggtgttg
     5101 ataacgccga caaccatcag gaagctgctg gatgatttct caacgctcac cccttgctgc
     5161 tgaacttctt gcggcagcaa cggcatcgcc agctgcagtt tgttctgcac ctgaacctgc
     5221 gcgatatccg catcagtacc agactcaaag gtcagggtga tctgcacggt ccccgtggag
     5281 tcactgttag aggacatgta catcaggtta tcgataccgt tcatattctg ttcgataacc
     5341 tgtgtcaccg tgtcctgcac tgttttcgca tcagcgccgg ggtaggaggc ggagatcgtt
     5401 actgccggcg gtgcaatcgt aggatattgc gccaccggca gtttgaggat cgccagcccc
     5461 cctgccaaca tgatgataat ggcgatcacc cacgcaaaaa tcgggcgatc gataaagaaa
     5521 ttaggcatgt cttaacggct cctgtttaag ttaagacttg gactgttcag gctgagcacc
     5581 gcttgcggct tgctggttat tatcagcggt aacttcttgt gcttttacct ggacaccagg
     5641 acgcactttc tgcagcccac ttattactac gcgatcgcct gctttcagac cttctgtcac
     5701 cagccactta tcgccaatag cctggcttgc aacgatcgga cgggtttcca ctttgtcatc
     5761 cgcgccaact accagtacgg tggcatcacc acgcggcgta cgggttacgc cctgttgcgg
     5821 gactaaaata gcgtttggat taagcccttc ttccagacgt gcgcgcacga acatacccgg
     5881 cagcagagtg tgatccgggt tcgggaagat agcgcgtagg gtgatagacc cagtggtctg
     5941 atcaacggta acgtcagaga attccagcgt accgtcctgc gggaacttaa tgccgtcact
     6001 ggtgatcagc gacactttgg ctttgccgtt ctcttgtttc agcgtgccat tcgccagttc
     6061 ctgtttcagg cgcaggaagt cgttgctgga ctgggtcaca tcaacgtaga tcggatcaag
     6121 ttgctgcacg gttgccagcg cagttgcctg accgttctgt accaatgcgc cttccgtcac
     6181 gttcgactta ccaatgcgac cgctaatcgg agcggtgact ttggtgtaag ccagattgat
     6241 ccgcgcagtt tcaacggcag ctttcgccgc agttaccgca gcattcgcct gttgcgcatc
     6301 agccagagcc tgatcgtact cttgcttact gatgtactga gtaccgagca gtttctgata
     6361 acgattcacc gtcaattgcg cgatattggc tgcagcctgg gctttcgcca gatcaccttt
     6421 cgcactgtcg tatgtcgcct gataggtcgc aggatcaatc tgatagagag agacaccagc
     6481 ttcgatgtcg ctaccttctt tgaaattacg cttcaggata atcccgctaa cttgaggacg
     6541 aacttctgcg atccggtagg cactggtgcg acccggaagc tcggttgtga tctgcagagg
     6601 ttcagttttg actgttacta cgccaacggc gggcatctgc tggccacctt gttgggcctg
     6661 tttgttgtca catcctgtta gggctaagct gcctgagagc atcagaacga ccgccagagg
     6721 cgtaaaccct ctgtttttgt tcatatgtaa acctcgagtg tccgatttca aattggtcaa
     6781 tggtcaaaag ttaataaacc cattgctgcg tttatattat cgtcgtgcta tggtacatac
     6841 attcacaaat gtatgtaaat ctaacgcctg taaattcacg aacatatggc acgaaaaacc
     6901 aaacaagaag cgcaagaaac gcgccaacac atcctcgatg tggctctacg tcttttctca
     6961 cagcaggggg tatcatccac ctcgctgggt gagattgcaa aagcagctgg cgttacgcgc
     7021 ggtgcaatct actggcattt taaagacaag tcggatttgt tcagtgagat ctgggaactg
     7081 tcagaatcca atattggtga actagagctt gagtatcagg caaaattccc tggcgatcca
     7141 ctctcagtat taagagagat attaattcat gttcttgaat ccacggtgac agaagaacga
     7201 cgtcgattat tgatggagat tatattccac aaatgcgaat ttgtcggaga aatggctgtt
     7261 gtgcaacagg cacaacgtaa tctctgtctg gaaagttatg accgtataga acaaacgtta
     7321 aaacattgta ttgaagcgaa aatgttgcct gcggatttaa tgacgcgtcg ggcagcaatt
     7381 attatgcgcg gctatatttc cggcctgatg gaaaactggc tctttgcccc gcaatctttt
     7441 gatcttaaaa aagaagcccg cgattacgtc gccatcttac tggagatgta tctcctgtgc
     7501 cccacgcttc gtaatcctgc cactaacgaa taaccctgaa tctgactcca ggatttttcc
     7561 tggacatttt cgtcgttgct attctggttc actgcgtcgt gatattcttg cggtttgact
     7621 ttttcaggtc gttcttcagg ttcagaaacc ttcattcatc atgactatgt tccagtatta
     7681 caaacgatca cggcattttg ttttttcagc atttattgct tttgtttttg tcttgttatg
     7741 ccagaacacg gcgtttgcgc gggcgtcatc gaatggtgat ctgccgacaa aagcggacct
     7801 gcaggcgcaa cttgactcac taaataaaca aaaagatctt tctgctcagg acaaactgga
     7861 gctgcaggat ctgacagata cattagccac cctcgataaa atcgatcgca taaaagaaga
     7921 gacagttcag ctacggcaaa aagtcgctga agcgccggaa aaaatgcgcc aggcgaccgc
     7981 ggcgttaaca gcacttagcg atgtcgataa cgacgaagaa acgcgcaaaa ttctgagtac
     8041 gctttcgttg cgccagctgg aaactcgcgt tgcccaggcg ctggacgatt tgcaaaacgc
     8101 acaaaacgat ctggcgtctt ataacagcca gctggtttcg ttacagacgc agcccgaacg
     8161 cgtgcaaaat gcgatgtata acgcttcgca gcagctgcaa caaattcgca gtcgtctgga
     8221 tgggactgat gtcggcgaga ctgccttacg tcccagccag aaagtgttaa tgcaggctca
     8281 gcaggcgttg ctgaatgcgg agattgacca gcagcgtaaa agcctggaag ggaacaccgt
     8341 cttgcaggat accttgcaaa agcaacgtga ttacgtgacg gcgaacagcg cccgtctgga
     8401 gcaccagttg cagctgttgc aagaagcggt aaacagcaag cgcctgactt taactgaaaa
     8461 aacggcgcag gaagccgtct ccccggatga agccgcgcgt attcaggcta atccgctggt
     8521 gaaacaggaa ctggaaatta accagcagtt aagtcagcgt ctgattaccg cgactgaaaa
     8581 cggtaatcag ttgatgcagc aaaacattaa agtcaaaaac tggctggagc gggcgctgca
     8641 atcggaacgc aatattaaag agcagattgc cgtcctgaag ggcagcctgc tgttgtctcg
     8701 tatcctttac cagcaacaac aaacgctgcc ctcggcggat gaactggaaa acatgaccaa
     8761 ccgcatcgcg gatttgcgtc tcgaacagtt tgaagttaac cagcagcgtg atgcactctt
     8821 ccagagcgat gcgttcgtca acaaactgga agaaggtcac accaacgaag tcaacagcga
     8881 agttcacgat gcgttattgc aagtggttga tatgcgtcgc gaattgctgg atcaactcaa
     8941 caaacagttg ggtaaccagc tgatgatggc cattaacctg caaatcaacc agcagcagtt
     9001 aatgagcgta tcgaaaaacc tgaaatccat cctgactcag caaatctttt gggtgaacag
     9061 taaccgtcca atggactggg actggatcaa agcgttcccg caaagcctga aagatgaatt
     9121 taagtcgatg aaaatcacgg tgaactggga aaaagcctgg cctgccgttt ttatcgcttt
     9181 cctcgccggt ttgccgctgc tgttgattgt cgggctgatc cactggcgtc tgggctggct
     9241 gaaagcgtat caacaaaaac tggcttccgc tgtgggttcc ctgcgtaacg atagccagct
     9301 caacacacca aaagcgatcc ttatcgacct gatccgcgcg ctgccggtgt gcctgattat
     9361 tctcgcggtt ggcttgattc tgttgaccat gcagctcaac atcagcgaac tgctatggtc
     9421 gttcagcaaa aaactggcga ttttctggct ggtgtttggc ctgtgctgga aggtactgga
     9481 gaagaacggc gttgccgtgc gtcacttcgg catgccggaa cagcagacca gccactggcg
     9541 tcggcaaatt gtccgcatca gtctcgcatt gctgcctatc catttctggt ctgtggtggc
     9601 agaactttcc ccgctgcatc tgatggatga tgtgctgggg caagcgatga ttttcttcaa
     9661 cctgctgctg attgccttcc tggtatggcc aatgtgccgc gaaagctggc gtgataaaga
     9721 gtcgcacacc atgcgactgg tcaccattac cgtgctgtcg attatcccga ttgcattgat
     9781 ggtgctgact gccacgggtt atttctacac cacgctgcgc ctctccgggc gttggattga
     9841 aaccgtttat ctggtgatca tctggaactt gctctaccag acggtattgc gcggcttaag
     9901 cgtagcggcg cggcgtatcg cctggcgtcg tgcgctggcg cgtcggcaga atctggtgaa
     9961 agagggcgca gaaggtgccg aaccgccgga agaacccacc attgcactgg aacaggttaa
    10021 ccagcagacg ctgcgtatta ccatgttgct gatgtttgcg ctgttcggtg tcatgttctg
    10081 ggcaatttgg tccgatttga tcaccgtgtt cagctatatc gacagcatta cgctctggca
    10141 ttacaacggt actgaagctg gcgctgcggt ggtgaaaaac gtcaccatgg gcagtctgtt
    10201 gtttgcgatt atcgcctcaa tggtggcctg ggcgttgatt cgcaacctgc ctggtttgct
    10261 ggaagtgctg gtgctctcgc gactgaatat gcgccagggc gcgtcgtatg ccattactac
    10321 catccttaac tacatcatta ttgccgttgg tgcgatgacg gtgttcggat cgctgggcgt
    10381 ctcttgggat aaactccagt ggctggcggc agcattatcc gtaggtcttg gttttggttt
    10441 acaagaaatt ttcggtaact tcgtctccgg tttgatcatt ctgttcgaac gtccggtgcg
    10501 tattggcgat acggtaacca ttggtagctt ctcggggacg gtaagtaaga tccgtattcg
    10561 tgcgacaacg attaccgatt tcgatcgcaa agaagtgatc atcccgaaca aagcgtttgt
    10621 taccgagcgt ctgatcaact ggtcgttgac tgacactact acgcgtctgg tgatccgtct
    10681 cggcgtggcc tatggctccg atctggaaaa agtgcgtaaa gtgttactga aggcggcgac
    10741 tgagcaccca agggtgatgc acgaaccaat gccggaagtc ttctttacgg cgtttggtgc
    10801 cagcacgttg gatcatgagc tgcgtctgta tgtgcgtgaa ctgcgtgacc gtagtcgtac
    10861 tgtcgatgag ctgaaccgta ctatcgatca gctgtgccgt gaaaacgaca tcaacattgc
    10921 ctttaaccag cttgaagtgc atctgcacaa cgagaagggc gatgaggtga cggaagtaaa
    10981 acgcgactac aaaggcgatg acccgacgcc agcggtaggg taataaccaa agggggcgac
    11041 atttagttgc cccgagatta ctgacaaagt gcgcgttgtt catgccggat gcggcgtgac
    11101 cgccttatcc ggcctacgaa accgcaagaa ttcaatgtat tgcaggagcg gtgtaggcct
    11161 gataagcgta gcgcatcagg cagttttgcg tttgcccaca atcttagggg acatttagcg
    11221 gccccattta tttctcactt ttccgcctca tcatcgcgcg ttaatttctt ttcataatcg
    11281 cgttttacaa tatccagcgc gcgcagcacg gtgcgggctg ggatctgatt ttcttccagc
    11341 agcacaatca aatcgacagc cagtttgaca tcgtcagggg cattttccag tgacatactc
    11401 tctccattgc tagcgggtta agcgcgctag cctgttttcg attttttcca gcgcatggcg
    11461 gcagcgtgcc aggcgcgctt cataggcttc cacttcacga tgcagcgttt gctgttccac
    11521 gagatcggtc acccgcgcca ggcgggctct gcgttcggca accatctcac gtagccgccg
    11581 ctcaaaatcc tgatgctgaa tacgtttacg ctgccagcgg gcaattttcg gtggcgcact
    11641 gtcccactcg cgcaatgacc aggcggaggc ttcacgcgcg atggcttcca gttgtgccgc
    11701 cagatgttcc gccagccagg ccacttgcgg cagctgttgc tgctcaactg catgacgaag
    11761 cgcagccaga ttatcgccag cctcatcgag acaagcctgc agtgttgtcg tacgggtttg
    11821 aaaaaggtgt ctgtcaaaac gggcacttag cgtggcaaat tgcgctaccg gggcacaacg
    11881 ctgacgcagc gtagcgagct gtccttccag tttttccagc agcagggcgg ttttcacgat
    11941 aagacctcaa tgaaaatgat aattgttatg ctaaagtagc cactctgtaa gctgacaaca
    12001 ctcaatatgc aacgaatcat tttaatcatc attggctggc tggcggtagt gctgggtacg
    12061 ctgggcgtgg tattaccggt attaccgacg acgccgttta tcctgctggc ggcctggtgc
    12121 tttgcccgtt cttccccgcg ctttcacgcc tggttgctgt accgctcatg gtttggcagc
    12181 tatctacgtt tctggcagaa acatcatgcg atgccgcgcg gcgtcaaacc gcgggcgatt
    12241 ttgcttattt tgctcacgtt tgccatttct ctgtggttcg tccagatgcc atgggtgcgc
    12301 atcatgttgc tggtaattct cgcctgtttg cttttctata tgtggcgaat tccggtgatt
    12361 gatgaaaagc aagaaaagca ctgaagcaca acaatcgcag ttgcaattat tgcgtacagc
    12421 cagtacattc tggcgttttc gagcacaggc gcaggcggtc aaaggttaaa caactgttac
    12481 ttttgatacg tttaaaacgc gccgtgagta ccaccgtaac aagcaggcat acacttatga
    12541 ccgcgactgc acagcagctt gagtatctca aaaatagcat caaaagcatt caggactacc
    12601 caaaacccgg cattcttttc cgcgatgtca ccagcttact ggaagacccg aaagcttacg
    12661 ctctcagcat cgacttgctg gttgagcgtt acaaaaatgc gggcattacc aaagttgtcg
    12721 gcaccgaagc gcgtggcttc ttgtttggcg ctccggtagc tctgggtctg ggcgttggct
    12781 ttgtaccggt ccgtaaaccg ggcaaactgc cgcgtgaaac catcagtgaa acttacgacc
    12841 tggaatacgg caccgatcag ctggagatcc acgttgatgc catcaaaccg ggcgacaaag
    12901 ttctggtggt ggacgatctg ctggcaaccg gcggcactat cgaagcgacc gttaaactga
    12961 tccgtcgtct gggtggtgaa gtggctgacg ctgcgttcat tatcaacctg ttcgatctcg
    13021 gcggcgaaca gcgtctcgaa aaacagggca ttaccagcta cagccttgtc ccgttcccgg
    13081 gccattaatt atcgccagtc ttgtgctgcc cacgctacgg acagcacaag atgtgcattc
    13141 agcctcgccg ttctgacggg gctgtgttag cattacccct tcgtgaatcc accttccagc
    13201 gtttcagagc ctgccaatga gttatcaggt cttagcccga aaatggcgcc cacaaacctt
    13261 tgctgacgtc gtcggccagg aacatgtgct gaccgcactg gcgaacggct tgtcgttagg
    13321 gcgtattcat catgcttatc ttttttccgg tacccgtggc gtcggaaaaa cctctatcgc
    13381 ccgactgctg gcgaaggggc taaactgcga aaccggcatt accgcgacgc cgtgcggcgt
    13441 gtgcgataac tgtcgtgaaa tcgagcaggg gcgctttgtc gatctgattg aaatcgacgc
    13501 cgcctcgcgc accaaagttg aagatacccg cgacctgctg gataacgtcc agtacgctcc
    13561 ggcgcgtggt cgtttcaaag tttatctgat cgacgaagtg catatgctgt cgcgccacag
    13621 ctttaacgca ctgttaaaaa cccttgaaga gccgccggag cacgttaagt ttctgctggc
    13681 gacgaccgat ccacagaaat tgccggtgac gattttgtcg cgctgtttgc aatttcatct
    13741 caaggcgctg gatgtcgagc aaattcgcca tcaacttgag cacatcctca acgaagaaca
    13801 tatcgctcac gagccgcggg cgttgcaatt gctggcgcgc gccgctgaag gcagcctgcg
    13861 agatgcctta agtctgaccg accaggcgat tgccagcggt gacggccagg tttcaaccca
    13921 ggcagtcagt gcgatgctgg gtacgcttga tgacgatcag gcgctgtcgc tggttgaagc
    13981 gatggtcgag gccaacggcg agcgcgtaat ggcgctgatt aatgaagccg ctgcccgtgg
    14041 tatcgagtgg gaagcgttgc tggtggaaat gctcggcctg ttgcatcgta ttgcgatggt
    14101 acaactttcg cctgctgcac ttggcaacga catggccgcc attgagctgc ggatgcgtga
    14161 actggcgcgc accataccgc cgacggatat tcagctttac tatcagacgc tgttgattgg
    14221 tcgcaaagaa ttaccgtatg cgccggaccg ccgcatgggc gttgagatga cgctgctgcg
    14281 cgcgctggcg ttccatccac gtatgcctct gcctgagcca gaagtgccgc gccagtcctt
    14341 tgcacccgtc gcgccaacgg cagtaatgac gccaacccag gtgccgccgc aaccgcaatc
    14401 agcgccgcag caggcaccga ctgtaccgct cccggaaacc accagccagg tgctggcggc
    14461 gcgccagcag ttgcagcgcg tgcagggagc aaccaaagca aaaaagagtg aaccggcagc
    14521 cgctacccgc gcgcgtccgg tgccatcggc gctggaaaaa gcgccagcca aaaaagaagc
    14581 gtatcgctgg aaggcgacca ctccggtgat gcagcaaaaa gaagtggtcg ccacgccgaa
    14641 ggcgctgaaa aaagcgctgg aacatgaaaa aacgccggaa ctggcggcga agctagcggc
    14701 agaagccatt gagcgcgacc cgtgggcggc acgggtgagt caactttcgc taccaaaact
    14761 ggtcgaacag gtggccttaa atgcctggaa agaggagagc gacaacgcag tatgtctgca
    14821 tttgcgctcc tctcagcggc atttgaacaa ccgcggtgca cagcaaaaac tggctgaagc
    14881 gttgagcacg ttaaaaggtt caacggttga actgactatc gttgaagatg ataatcccgc
    14941 ggtgcgtacg ccgctggaat ggcgtcaggc gatatacgaa gaaaaacttg cgcaggcgcg
    15001 cgagtccatt attgcggata ataatattca gaccctgcgt cggttcttcg atgcggagct
    15061 ggatgaagaa agtatccgcc ccatttgatc gtaagcacag cttacgttcg tcatccttaa
    15121 cgtgattgag agagaaacct atgtttggta aaggcggtct gggtaacctg atgaagcaag
    15181 cccagcagat gcaagaaaaa atgcagaaaa tgcaggaaga gatcgcgcag ctggaagtca
    15241 ccggcgaatc tggcgcaggt ctggtaaaag tgaccatcaa cggtgcacac aactgccgtc
    15301 gcgtagagat cgacccgagc ctgctggaag acgacaaaga gatgctggaa gacctggtgg
    15361 ctgcagcatt caacgacgca gcacgtcgta ttgaagaaac gcagaaagaa aaaatggcct
    15421 ctgtatcctc cggaatgcag ctgccgcctg gctttaagat gccgttctga tgcaaaccag
    15481 cccgctgtta acacagctta tggaagcact gcgctgtctg tcgggcgttg gcccgaagtc
    15541 ggcgcagcgt atggcgttca cgctgcttca gcgcgatcgt agcggcggga tgcgtctggc
    15601 gcaggcgctc acccgggcga tgtcggaaat cggccactgc gccgattgcc gcactttcac
    15661 cgaacaggaa gtctgtaaca tctgttcgaa tccgcgtcgt caggaaaacg gtcaaatctg
    15721 tgtggtggag agtccggcgg acatctacgc cattgagcag acggggcagt tttctggtcg
    15781 ttattttgtg ttgatggggc atctgtcacc gctggacggc atcggtccgg atgatatcgg
    15841 gcttgatcgt ctggaacagc gtctggcaga ggaaaaaatc actgaagtga tcctcgccac
    15901 caatcccacg gttgaaggtg aagctaccgc taactacatt gccgagcttt gcgcgcaata
    15961 tgacgtggaa gctagccgaa tcgctcatgg cgtaccggtt ggcggcgaac tggaaatggt
    16021 cgatggcacc acgctgtcac actcccttgc cgggcgtcat aagattcgtt tttaagcaaa
    16081 cgagagcagg atcacctgct ctcgcttgaa attattctcc cttgtcccca tctctccctc
    16141 atcctgtttt taaccttaaa atggcattat tgaggtagac ctacatgaaa ggacaagaaa
    16201 ctcgtggttt tcagtcagaa gtgaaacagc ttctgcacct gatgatccat tctctctatt
    16261 ccaataaaga aatcttcctg cgtgagctta tctctaacgc ctccgatgcg gcggacaagc
    16321 tgcgtttccg tgcgctatct aacccggacc tgtacgaagg tgatggcgaa ctgcgcgttc
    16381 gtgtctcttt cgataaagac aagcgcacgc tgaccatctc cgataacggc gtggggatga
    16441 cccgcgacga agtgattgac catctgggga ctatcgctaa atccggtacc aaatcattcc
    16501 tcgaatccct gggttctgac caggcgaaag acagccagct gatcggtcag tttggtgttg
    16561 gtttctactc tgcgtttatc gtggccgaca aagtgactgt gcgtactcgc gcggcaggcg
    16621 aaaaaccaga aaacggcgtc ttctgggaat cggctggcga aggtgaatat accgttgccg
    16681 acatcaccaa agaagatcgt ggtactgaaa tcaccctgca tctgcgtgaa ggcgaagacg
    16741 agttcctcga tgactggcgc gtgcgttcca tcatcagcaa atactccgac catatcgcgc
    16801 tgccggtaga gatcgaaaaa cgcgaagaga aagacggcga aaccgttatc tcctgggaga
    16861 aaatcaacaa agcgcaggcg ctgtggactc gtaacaagtc ggaaatcacc gatgaagagt
    16921 acaaagagtt ctacaaacac atcgcccacg actttaatga tccgctgacc tggagccaca
    16981 accgcgttga aggtaagcag gagtacacca gcctgctgta catcccgtcc caggctccgt
    17041 gggatatgtg gaaccgtgat cataaacacg gcctgaaact gtacgtccag cgtgtgttca
    17101 tcatggacga cgcagaacag ttcatgccga actatctgcg cttcgtgcgt ggtctgattg
    17161 actccagcga tctgccgctg aacgtttccc gtgaaatcct ccaggacagc acggtaacgc
    17221 gtaacctgcg caatgcgctg accaagcgtg tgctgcaaat gctggaaaaa ctggcgaaag
    17281 acgacgcgga aaaataccag accttctggc aacagtttgg cctggtactg aaagaaggtc
    17341 cggcggaaga tttcgctaac caggaagcga tcgccaaact gctgcgtttt gcttctaccc
    17401 ataccgattc ttctgcgcag accgtatctc tggaagacta cgtttcccgc atgaaagaag
    17461 ggcaggagaa aatctactac atcaccgcag acagctatgc ggcagcgaag agcagcccgc
    17521 acctggaact gctgcgtaag aaaggcatcg aagttctgct gctttccgac cgcatcgatg
    17581 agtggatgat gaactatctg actgagttcg acggtaaacc gttccagtcg gtgtctaaag
    17641 ttgacgagtc gctggaaaaa ctggctgacg aagttgatga gagcgcgaaa gaagcggaga
    17701 aagcactgac tccgttcatc gaccgtgtga aagccttgct cggcgagcgc gtgaaagatg
    17761 tccgtctgac tcaccgtctg accgatacgc cagcgatcgt ttcgaccgac gcggacgaaa
    17821 tgagcactca gatggcgaaa ctgttcgctg cggcgggcca gaaagtgcca gaagtgaaat
    17881 acatcttcga actgaacccg gatcacgtac tggtgaaacg tgcggcagat actgaagatg
    17941 aagcgaagtt cagcgagtgg gtagaactgc tgctggatca ggcgctgctg gcagaacgcg
    18001 gcacgctgga agatccgaac ctgtttattc gtcgtatgaa ccagctgctg gtttcctgat
    18061 gtcatgccgg atgacctttg tgtcatccgg catttttctt ttcatcatct gcactttccg
    18121 caaattatct cgccattaac cgtttcagcc tcaggtgcct ttcttgaggc aatcgcctgt
    18181 tggtggtatc gtttatcgct ttttcaaaaa attcgacaca ttttaagggg attttcgcaa
    18241 tgcgtatcat tctgcttggc gctccgggcg cggggaaagg gactcaggct cagttcatca
    18301 tggagaaata tggtattccg caaatctcca ctggcgatat gctgcgtgct gcggtcaaat
    18361 ctggctccga gctgggtaaa caagcaaaag acattatgga tgctggcaaa ctggtcaccg
    18421 acgaactggt gatcgcgctg gttaaagagc gcattgctca ggaagactgc cgtaatggtt
    18481 tcctgttgga cggcttcccg cgtaccattc cgcaggcaga cgcgatgaaa gaagcgggca
    18541 tcaatgttga ttacgttctg gaattcgacg taccggacga actgattgtt gatcgtatcg
    18601 taggccgccg cgttcatgcg ccgtctggtc gtgtttatca cgttaaattc aatccgccga
    18661 aagtagaagg caaagacgac gttaccggtg aagaactgac tacccgtaaa gacgatcagg
    18721 aagaaaccgt acgtaaacgt ctggttgaat accatcagat gactgcaccg ctgatcggct
    18781 actactccaa agaagcggaa gcgggtaaca ccaaatacgc gaaagttgac ggcaccaagc
    18841 cggttgctga agttcgcgct gatctggaaa aaatcctcgg ctaatcaagc cgcagcagat
    18901 ctgctttcgg gcaggtctgc tcatccacct caggcaatac ctctcacagc aattagttct
    18961 tcttcctcac ttttccgcta caattatcaa caagttgaat cgataagagg cggtaatgcg
    19021 tcagactaaa accggtatcc tgctggcaaa cctgggtacg cccgatgccc ccacacctga
    19081 agcggtaaaa cgctatctga aacaattttt aagcgacaga cgcgtggttg atacctcacg
    19141 gttgttatgg tggccattgc tgcgcggcgt tattttgccg ctgcgctcgc cgcgtgtggc
    19201 gaagctgtat gcctctgtct ggatggaagg tggctcgccg ctgatggttt acagccgcca
    19261 gcaacagcag gcgctggcac aacgtttacc ggagacgcct gtagcgctgg gaatgagcta
    19321 cggctcgcca tcactggaaa gcgccgtcga tgaactcctg gcagagcatg tagatcatat
    19381 tgtggtgctg ccgctttatc cgcaattctc ctgttctacg gtcggtgcgg tatgggatga
    19441 actggcacgc attctggcgc gcaaacgtag cattccgggg atatcgttta ttcgtgatta
    19501 cgccgataac cacgattaca ttaatgcact ggcgaacagc gtacgcgctt cttttgccaa
    19561 acatggcgaa ccggatctgc tgctgctctc ttatcatggc attccccagc gttatgcaga
    19621 tgaaggcgat gattacccgc aacgttgccg cacaacgact tgcgaactgg cttccgcact
    19681 ggggatggca ccggaaaaag tgatgatgac ctttcagtcg cgctttggcc gggaaccctg
    19741 gctgatgcct tataccgacg aaacgctgaa aatgctcgga gaaaaaggcg taggtcatat
    19801 acaggtgatg tgcccgggct ttgctgcgga ttgtctggag acgctggaag agattgccga
    19861 gcaaaaccgt gaggtcttcc tcggtgccgg cgggaaaaaa tatgaatata ttccagcgct
    19921 taatgccacg ccagaatata tcgaaatgat ggctaatctt gttgccgcgt atcgctaaag
    19981 ctgagcggta aagaactgag cgccgtcgcg aagagcctcg tcggcggttt tcatcattcg
    20041 tgaataatgc aaaaaggcat gcagcgtacc tgggtagagt ttgaactcac agggctgctg
    20101 atgcgccgct aacgtctggt aaagcagacg gctgtcatcc agcagcggat cgaactccgc
    20161 cccggcaata aaacagggcg gaacttcgcg agtgagatca ttattaaaca gacagtaata
    20221 cggtgactcg cggtccgcgt cgttgcttaa atacgcctct tcatacatct gcaaatcctg
    20281 ttgcgttaag ccatcccaga caccgcccaa cagacgacga gtcacggaat cccgtaatcc
    20341 gtaaagccca taccacagca aaacacccac aattttaccg caatcgatct gtttatcacg
    20401 caaccacaac gcactggcga gcgccagcat ggcacctgcg gaatcaccgg caaagccaat
    20461 gcgggacata ttgatttgat aatcctccgc ctgctggtgg aaataacaac aagcagccac
    20521 aatttcctct atcgcttgcg gaaaacgcgc ttcaggtgaa agggggtaat caataccaat
    20581 caccgtacat tggctgtagc ttgccagcag gcgcatgatg cgatcgtggg tatcgagatt
    20641 gccgagaata aaaccgcctc catgcaaata aaatagcgtc gccgggctat ctggctgcgg
    20701 acaaaagaga cgtgtttcca cctgcccata ttttgttgga accatgtaag ctctggttgc
    20761 catttctgga gcgcccgcat tccagaatcg gcgctcaagc gtgtaatact gtcgttgctc
    20821 agcaatcgtt cccgttgcgg gccaggacgg taaatccggc tgaagagtat tcacaacggt
    20881 cttcatttca gcagaaataa ggtccagaac aggtagtttg ttttccggct tcatacaaaa
    20941 actcctttca aattacgtca ttgtaaggaa ccactgccat gaaaatgcga tcccgcctgc
    21001 tgatattgaa actggctgcg tctcgcgcgc tcccgtcaga ttgtgttaac attcgccgct
    21061 cagttaacca cccgtaaaaa caaccatgaa atttcccggt aaacgtaaat ccaaacatta
    21121 cttccctgta aatgcacgcg atccgctgct tcagcaattc cagccagaaa acgaaaccag
    21181 cgccgcctgg gtcgtaggta ttgaccagac gctggtcgat attgaagcga aagtggatga
    21241 tgaattcatt gagcgttatg gattaagcgc cgggcattca ctggtgattg aggatgacgt
    21301 agccgaagcg ctttatcagg agctaaaaca gaaaaacctg attacccatc agtttgcggg
    21361 tggcaccatt ggtaacacca tgcacaacta ctcggtgctc gcggacgacc gttcggtgct
    21421 gctgggcgtc atgtgcagca atattgaaat tggcagttat gcctatcgtt acctgtgtaa
    21481 cacttccagc cgtaccgatc ttaactatct acaaggcgtg gatggcccga ttggtcgttg
    21541 ctttacgctg attggcgagt ccggggaacg tacctttgct atcagtccag gccacatgaa
    21601 ccagctgcgg gctgaaagca ttccggaaga tgtgattgcc ggagcctcgg cactggttct
    21661 cacctcttat ctggtgcgtt gcaaaccggg tgaacccatg ccggaagcaa ccatgaaagc
    21721 cattgagtac gcgaagaaat ataacgtacc ggtggtgctg acgctgggca ccaagtttgt
    21781 cattgccgag aatccgcagt ggtggcagca attcctcaaa gatcacgtct ctatccttgc
    21841 gatgaacgaa gatgaagccg aagcgttgac cggagaaagc gatccgttgt tggcatctga
    21901 caaggcgcta gactgggtag atctggtgct gtgcaccgcc gggccaatcg gcttgtatat
    21961 ggcgggcttt accgaagacg aagcgaaacg taaaacccag catccgctgc tgccgggcgc
    22021 tatagcggaa ttcaaccagt atgagtttag ccgcgccatg cgccacaagg attgccagaa
    22081 tccgctgcgt gtatattcgc acattgcgcc gtacatgggc gggccggaaa aaatcatgaa
    22141 cactaatgga gcgggggatg gcgcattggc agcgttgctg catgacatta ccgccaacag
    22201 ctaccatcgt agcaacgtac caaactccag caaacataaa ttcacctggt taacttattc
    22261 atcgttagcg caggtgtgta aatatgctaa ccgtgtgagc tatcaggtac tgaaccagca
    22321 ttcacctcgt ttaacgcgcg gcttgccgga gcgtgaagac agcctggaag agtcttactg
    22381 ggatcgttaa gttatcgtcg gttcgtaggc cagataaggc gttcacgccg catctggcat
    22441 ttggctctcg atgcctgatg cgacgctggc gcgtcttatc atgcctacat atttttcata
    22501 ttttacatcc ggcaaccacc gtttaccccg tcaccacctc acccgccggt ggcgtttcca
    22561 gcagttccag catggtacgg gcgatttcac gctcgcccat cactacctga ttcgcaccac
    22621 gttcggtgat atacgccact tcatcgtcat aatgggcgcg ggcaataatc tcaatatccg
    22681 gatttttcgc gcgggcagat gccacaatct cacccgcttc ataaccgttg ggaatcgtca
    22741 ggatcagcca ttttgcacat tccagatgcg ccagttgcat aatttcttcg ttcgccgcat
    22801 tgcccaatac tgcgcggacc ccgcgctctc gcagctcatc aacacgggtt cgtgacgtct
    22861 caatcaccac cagcggaata tcagaggcga gcaatttctc ccccagcagg ctgcctacac
    22921 gaccgtaacc caccagtagc gcatggttgc aaatatccac tgggatctgc ttctcttctt
    22981 cgattgcctc ttccagcgtc tgctcttcca gcgtttcggt cttcgccaga tatttctcca
    23041 gtagtgcgaa cagtaccggg ttgagcataa tcgacaggat cgcccctgcc agtaccaggt
    23101 tttgtccggc ctgcggcagt aaattcaatg ccattcccag tcccgccagg ataaacgcga
    23161 actcaccaat ctgcgccagg ctggcggcga tggttaatgc cgtacgttgg gagtgaccaa
    23221 acagtcgcac caggaaaaat gcggctaacg acttaccaaa cagaataatc gccagcgtcg
    23281 ccagcactgc cagcggttgc tgaatcagaa ttaacggatc aaacaacatc ccgacggaga
    23341 caaaaaacag caccgcaaac gcgtcgcgca atggcagcgt atcgtgggcg gcacggtgac
    23401 tcagttcaga ctcgttcagt accatcccgg caaagaacgc accgagtgca aaggagacat
    23461 caaacagctc taccgcacca aaggcaatcc ctaacgccag cgccagcacc gacagggtaa
    23521 acagctcgcg agaaccggtt gccgcgctgc gtgccataat ccacggcacc agacggcgac
    23581 ctaccagcat cataatggcg ataaatgcga tcactttgcc gatggtgatc cccatatcga
    23641 ctgcaagagt ggcaaagccc acatcgccct gttccatcat tcctgccact gcgggcagca
    23701 acaccagcgt cagaaccatt accaggtctt ccacaatcaa ccaaccgatg gcgatttgcc
    23761 cacgctgact gtcaattaat tgccgttctt caagtgcgcg cagtaacacc acggtactgg
    23821 cggtggaaag acataaaccg aacacgatac cggtcattaa cgaccagccc agcacggcag
    23881 agagcgccat acccagcagc gtcgccacgg ctatctgggc gatcgcaccg ggaatggcga
    23941 tggcctttac cgccatcaaa tccttcagcg aaaagtgcaa accgacgcca aacatcaaca
    24001 gaatgacgcc cagttcagcc agttccggcg caagcttggt atcggcaaca aagcccggag
    24061 tgaatggtcc tgccagcaca cccgctaaca gatatcccac cagaggagaa atacgtagtt
    24121 tattggccag catgccgagg ataaaggcga gcacaaggcc gccaacaatg gtggtgataa
    24181 gcggggtggc gtgatgcatt ccgtctcctt ttcctggtgg ttattgtcca tttttggccg
    24241 ggaaaaccaa aattacaggt aatagtttat gacaatttca ttgatgatgt tcatgaataa
    24301 ttattgaatt ttgcagaaaa atggaattag ctgcaaaaaa agcacggatc ggaaaacaga
    24361 aggcggttta acagaggaaa ggcttatggc gactgtaaaa cgatgcagcc aaagtttgcc
    24421 tttggctgca atgaaatcag tctttatgcc ggttatcagg caggaatatg gtcaacatcc
    24481 ccaatagtgg caggaaagca cagattttat agactaactc gatgctggtg tgatcggcga
    24541 taagccccag aactgccgct cccagacctc ccatgccaaa agcaaaaccg aaaaagagtc
    24601 cagaaaccat accgatacgt cccggaagta gctcctgagc gtagaccaga atggcagaga
    24661 atgccgaagc gaggataaat ccaataatca ccgttaaaac ccccgtccag tgcaggctgg
    24721 cgtagggtaa aatcagcgta aacggcgcaa cgccgaggat agagccccaa atcacatatt
    24781 tccgtccaat tttatcccct acaggcccgc cgatcaccgt acctgccgca acggcaaaca
    24841 ggaaggcaaa cagatgaagc tgggcattct ggatagataa tccgaatttt tgcatcagat
    24901 aaaaggtgta atag
//
LOCUS       DAJVUK010000047        24757 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.047, whole genome shotgun sequence.
ACCESSION   DAJVUK010000047 DAJVUK010000000
VERSION     DAJVUK010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24757
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.047"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..225)
                     /locus_tag="OQQ57_001795"
     CDS             complement(<1..225)
                     /locus_tag="OQQ57_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HCS1956590.1"
                     /translation="MTWNLLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINIL
                     FTSRQMIIETFICPVSSISNPDEFNTFLLRN"
     gene            complement(352..1083)
                     /gene="rlmB"
                     /locus_tag="OQQ57_001796"
     CDS             complement(352..1083)
                     /gene="rlmB"
                     /locus_tag="OQQ57_001796"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HCS1956591.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALE
                     AQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLVRT
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(1264..3705)
                     /gene="rnr"
                     /locus_tag="OQQ57_001797"
     CDS             complement(1264..3705)
                     /gene="rnr"
                     /locus_tag="OQQ57_001797"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HCS1956592.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAECRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRLVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(3744..4169)
                     /gene="nsrR"
                     /locus_tag="OQQ57_001798"
     CDS             complement(3744..4169)
                     /gene="nsrR"
                     /locus_tag="OQQ57_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HCS1956593.1"
                     /translation="MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(4374..5672)
                     /gene="purA"
                     /locus_tag="OQQ57_001799"
     CDS             complement(4374..5672)
                     /gene="purA"
                     /locus_tag="OQQ57_001799"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HCS1956594.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(5776..5973)
                     /locus_tag="OQQ57_001800"
     CDS             complement(5776..5973)
                     /locus_tag="OQQ57_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HCS1956595.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(6055..7059)
                     /gene="hflC"
                     /locus_tag="OQQ57_001801"
     CDS             complement(6055..7059)
                     /gene="hflC"
                     /locus_tag="OQQ57_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HCS1956596.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(7062..8321)
                     /gene="hflK"
                     /locus_tag="OQQ57_001802"
     CDS             complement(7062..8321)
                     /gene="hflK"
                     /locus_tag="OQQ57_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HCS1956597.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTYPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(8407..9687)
                     /gene="hflX"
                     /locus_tag="OQQ57_001803"
     CDS             complement(8407..9687)
                     /gene="hflX"
                     /locus_tag="OQQ57_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HCS1956598.1"
                     /translation="MFDRYDAGEQAVLVHIYFTKDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(9764..10072)
                     /gene="hfq"
                     /locus_tag="OQQ57_001804"
     CDS             complement(9764..10072)
                     /gene="hfq"
                     /locus_tag="OQQ57_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HCS1956599.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(10158..11108)
                     /gene="miaA"
                     /locus_tag="OQQ57_001805"
     CDS             complement(10158..11108)
                     /gene="miaA"
                     /locus_tag="OQQ57_001805"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HCS1956600.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG"
     gene            complement(11101..12948)
                     /gene="mutL"
                     /locus_tag="OQQ57_001806"
     CDS             complement(11101..12948)
                     /gene="mutL"
                     /locus_tag="OQQ57_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HCS1956601.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPN
                     AQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(12958..14295)
                     /gene="amiB"
                     /locus_tag="OQQ57_001807"
     CDS             complement(12958..14295)
                     /gene="amiB"
                     /locus_tag="OQQ57_001807"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HCS1956602.1"
                     /translation="MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFI
                     GDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDL
                     TENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNP
                     FKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNV
                     TIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNR
                     SATGASVWVLSNRRANSEMASWLEQHEKHSELLGGAGDVLANSQSDPYLSQAVLDLQF
                     GHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEE
                     RLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(14314..14775)
                     /gene="tsaE"
                     /locus_tag="OQQ57_001808"
     CDS             complement(14314..14775)
                     /gene="tsaE"
                     /locus_tag="OQQ57_001808"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HCS1956603.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(14747..16294)
                     /gene="nnr"
                     /locus_tag="OQQ57_001809"
     CDS             complement(14747..16294)
                     /gene="nnr"
                     /locus_tag="OQQ57_001809"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HCS1956604.1"
                     /translation="MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
                     PAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            16293..17432
                     /gene="queG"
                     /locus_tag="OQQ57_001810"
     CDS             16293..17432
                     /gene="queG"
                     /locus_tag="OQQ57_001810"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HCS1956605.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQPICPWNRYSQLTTEEDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA"
     gene            complement(17415..17468)
                     /locus_tag="OQQ57_001811"
     CDS             complement(17415..17468)
                     /locus_tag="OQQ57_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956606.1"
                     /translation="MRFYFYSQAVDESGVTR"
     gene            complement(17697..17772)
                     /locus_tag="OQQ57_001812"
     tRNA            complement(17697..17772)
                     /locus_tag="OQQ57_001812"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17737..17739),aa:Gly,seq:gcc)
     gene            complement(17809..17884)
                     /locus_tag="OQQ57_001813"
     tRNA            complement(17809..17884)
                     /locus_tag="OQQ57_001813"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17849..17851),aa:Gly,seq:gcc)
     gene            complement(17921..17996)
                     /locus_tag="OQQ57_001814"
     tRNA            complement(17921..17996)
                     /locus_tag="OQQ57_001814"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17961..17963),aa:Gly,seq:gcc)
     gene            complement(18207..18752)
                     /gene="orn"
                     /locus_tag="OQQ57_001815"
     CDS             complement(18207..18752)
                     /gene="orn"
                     /locus_tag="OQQ57_001815"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HCS1956607.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDSFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            18847..19899
                     /gene="rsgA"
                     /locus_tag="OQQ57_001816"
     CDS             18847..19899
                     /gene="rsgA"
                     /locus_tag="OQQ57_001816"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HCS1956608.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNELLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            19996..20964
                     /gene="psd"
                     /locus_tag="OQQ57_001817"
     CDS             19996..20964
                     /gene="psd"
                     /locus_tag="OQQ57_001817"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HCS1956609.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            20986..24309
                     /gene="mscM"
                     /locus_tag="OQQ57_001818"
     CDS             20986..24309
                     /gene="mscM"
                     /locus_tag="OQQ57_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HCS1956610.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERTREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(24460..>24757)
                     /locus_tag="OQQ57_001819"
     CDS             complement(24460..>24757)
                     /locus_tag="OQQ57_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1956611.1"
                     /translation="LPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVT
                     FANVFTIIPPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
BASE COUNT         5699 a         6912 c         6291 g         5855 t
ORIGIN      
        1 atttcttaat aagaaggtat taaattcatc tggattgctg atactactta ccggacaaat
       61 aaaggtttcg ataatcattt ggcgggaagt aaaaagaata ttgatttgca aatcgccata
      121 atcattcatt ttaataatta atgcgttctc gctatttgtt acatcaatat tttgttcagg
      181 tacagtttgc agcgccgtcg ccagcgccaa cagattccat gtcatatatt attccatata
      241 gatttagttt aaatattaat aaaatgaata tttgcagtac gtaattatct taccagctat
      301 agacaaaaaa aaaccatcca aatctggatg gcttttcata attcagagga actagctgcg
      361 ctgacgcacc gcttcaaata agcaaattcc ggttgcaacc gaaacgttca gagaagaaac
      421 acttcctgcc attgggatgc tgatcaactc atcgcaatgt tcacgggtca ggcgacgcat
      481 accttcacct tccgcgccca tcaccagcgc caggcgtccg gtcattttgc tctgatagag
      541 tgtatgatcc gcctcacctg ccgtaccgac gatccagata ttctcttcct gcaacatacg
      601 catggtacgc accaggttag tcacccgaat cagcggaacg ctttctgccg cgccacaggc
      661 cacttttttc gccgtggcgt tgagctgggc ggagcgatct ttcggcacaa tcaccgcatg
      721 aacaccagcg gcatctgcgc tacgcaggca cgcgccgagg ttatgcggat cggttacacc
      781 gtcaaggatc agcaggaacg gctgatcgag cgaagcgatc agatccggca aatcattttc
      841 ctggtactga cgtcctggct tcacgcgggc gataatgccc tgatgcacgg caccgtcgct
      901 tttctcgtcg agatattggc ggtttgccag ctggataacc acgccctggg cttcgagggc
      961 gtgaatcagc ggtaacagac gtttatcttc acggcctttt aaaataaaga cttcctgaaa
     1021 acgttcaggg gcgcgctcca gcagggcctg cactgcgtgg atgccgtaaa tcatttcgct
     1081 cattaatgta ctcgttgttt acgttttgcc tgatgcacta cgtttatccg gcctacatga
     1141 tctctgcaat atattgaatt tgcgtgatta tgtaggccgg ataaggcgtt cacgccgcat
     1201 ccggcatgaa caaagcgcat tttgtcagca atctaaccct cttctgtttg aagagggtaa
     1261 tgatcactct gccacttttt tcttcgccgc acgcttcgct ttggtcgctg cagctatttt
     1321 ctgcgttttc gccgatggct ttttcgcttt tctcgcgtct ttcttcgctg ctttcggctt
     1381 cgtttttttc tcaccgcgga aggcgctgtc tggctcaaag tttacctttt taccgaccag
     1441 acgacgcttg ccgccttttt tacctgcatc gccttttttc gctttctcgc gcgccgtttt
     1501 accgacgttg cgcggtgcgc gttcgctgga gatcaggcta aagtcgattt tgcgctcgtc
     1561 catattaacc gcttcgacgc gaacttccac gcgatcgccc agacgataag tctggccgct
     1621 ggattcaccc atcagccgtt gccctacctg gtcaaagcga tagtagtcat tgtccagcga
     1681 agagacatgg accagaccat caatgaataa gtcgtccaga cggacaaaga atccaaagcc
     1741 agtgacgctg gaaattacgc ctttaaagac gttacctacc tggtcgagca tgaagtcaca
     1801 cttcagccag tcagccacat cgcgcgttgc ttcgtcggca cgacgttccg ccatcgaaca
     1861 gtgctgaccc agttgcagca tttcttccat cgaataatgg tagccgccgg tttcagtggt
     1921 gttgccctga tgcccctgct ctttcgccag cagatattta atggcgcggt gcagcgtcag
     1981 gtctggataa cgacgaatcg gcgaagtaaa gtgcgcatag gactgcaatg ccaggccaaa
     2041 gtgaccacgg ttttctggat cgtaaatcgc ctgtttcatc gagcgcagca gcatggtttg
     2101 cagcatttct gcatcaggac gatcggcaac cgactccagc agctccgcgt agtcacgcgg
     2161 ttccggcttg ttaccgcccg gcagttccag tcccagctcc gccagtactg aacggaaaga
     2221 ggtaatcgct tcggtgctcg gcttgtcgtg aatacggaac aatgctggtt ctttggcttt
     2281 ctcaacgaaa cgcgccgccg agatattcgc cagaatcatg cactcttcaa ttaacttgtg
     2341 tgcgtcgtta cgctgagtct gttcgatacg ctcaatacgg cattcagcgt tgaaaataaa
     2401 cttcgcttct tcgctctcaa atgagatccc gccacgttct tcacgggctt tatccagcac
     2461 tttatagagg ttatgcaact cttcgagatg cttaaccagc ggagcgtact gctcgcgcag
     2521 atcctgatcg ccctgcagaa tatgccagac tttggtgtag gtcagacgcg cgtgagagct
     2581 catcaccgct tcgtagaatt tgtagcccgt caggcggcct ttcgacgaaa ccgtcatctc
     2641 gcacaccata cacaggcggt ctacctgcgg attgagcgag cacagaccgt tagagagcac
     2701 ttccggcagc atagggataa cctgcgaagg gaagtacacc gacgtaccac gattacgcgc
     2761 ttctctatcc agcggcgttg gcggacgcac atagtagctg acgtcggcaa tcgcgaccca
     2821 taaacgccag ccgccgccgc gttttttctc gcagtaaacc gcatcgtcaa agtcacgggc
     2881 gtcttcgcca tcaatggtga ccagcggtaa atcgcgcaaa tcgacacggc ccgcttttgc
     2941 ttcttccggc acttcttctt tcagcccggc aacctgttgc tcaacagcct gcggccagat
     3001 gtacggaatt tcatgggtac gcaaagcgat atcaaccgcc atgccggtgc ccatattgtc
     3061 gcccagcact tcgacgattt tacccaccgc tttggtacgg cgagtcgggc gttgggtcag
     3121 ttcaacaacc accacaaagc ccatccgcgc gcccatgatc tgatcgggcg ggattaagat
     3181 atcgaagctc agacggctat cgtcaggaac cacaaagccg acgcccgctt cggtaaagta
     3241 gcgaccaaca atctggctgg tttttggcac cagtacgcgg acaatacgcg cttcacgacg
     3301 acctttacgg tcagcaccca gcggctgagc cagcacctga tcgccatgaa tgcaggtttt
     3361 catctgctcg ctggagagat acaaatcatc tttacgccct tcaacccgca gaaagccgta
     3421 gccatcacgg tggccaataa cggtaccttt caccaggtcg aggcgttccg gcagcgcata
     3481 gcactgacga cgagtgaaga ccagttgacc atcgcgctcc atcgcgcgca ggcggcgacg
     3541 caggccttca agctgctctt cgccttcaat gtgcagttct accgccagct catcacggct
     3601 ggccggtttt tcacgtttgg ttaaatgttc gaggataaat tcccgactag ggatgggatt
     3661 cgcgtatttt tcagcttcgc gttcctggaa aggatcttgt gacatctcgg ttcctccgtt
     3721 gtcatctctg atgaagattt tcgtcactcc accagcaata atttataaag cggttgattc
     3781 tcttcaacca aatcggcaag cgtgtagtta tccagttccg taagaaaact ttgcacggcc
     3841 ttagaaagcg cctgtttcaa ccgacaggca ggtgtaatgt ggcaaaactc actgctgcaa
     3901 ttcaccagcg ataagggctc cagctcgcgc accacatcac caatacgtat cgcactcgcc
     3961 ggtttaccca ggcgaatgcc gccatttttt ccacgaacag cagtcacgta gccggcacga
     4021 ctaagttgat tgattatttt gaccatatga ttacgggaga cgccgtagac gtcagtcact
     4081 tcagaaatac tggtcatccg cccttctggc aatgacgcca tgtagatcag cgcacgtaat
     4141 ccgtaatcag tgaaactcgt taactgcaca tcaacctcaa aagggaaatc gggaaaaaat
     4201 acatttatat tgatgataaa ccagccacaa gctgtgtcgc taatttattt cagttcgggg
     4261 aaggaaaaaa gcgaggattt aacactgtgt cggatagcgt aatggcttaa ccgacacagc
     4321 aatgtatcac actgttagcc cggcaggcaa aatatctgcc aggcgtacca gaattacgcg
     4381 tcgaacgggt cgcgcagaat catagtttca gtacgatccg gaccggtaga gatgatatcg
     4441 atcggcacac cggtcagctc ttcaatacgc ttgatgtagt tcagcgccgc ctgcggcagc
     4501 ccgctacgat ctttcacgcc gaaagtggat tcagaccagc ccggcatggt ttcgtaaatc
     4561 ggctctacac ctttccagtc gtcagctgcc agcggagtgg tagtcacttc gcgaccatcc
     4621 ggcatacggt aagccacgca gagtttaacc tctttcaggc catccagaac gtccagttta
     4681 gtcaggcaga agccagacag ggagttcagc tgtaccgcac gacgaacggc aacggtgtcc
     4741 agccagccgg tacgacgacg acgacccgtc gttgcgccga attcgttacc ctgcttgcag
     4801 aggaactcgc cagtttcatc aaacagttcg gtcgggaaag gacctgcacc cacacgagtg
     4861 gagtaagctt tgaggatacc cagaacgtaa tcaacataac gcgggcccag gccggaaccg
     4921 gtcgccacgc caccagcagt ggtgttggaa gaagttacgt acggataagt accgtggtcg
     4981 atatccagca gcgtaccctg cgcaccttca aacatgacga aatcgccacg ctgacgcgcc
     5041 tggtcgagca ggtcagaaac gtcaaccacc atagaagtca ggatgtcggc aacagccatc
     5101 gtatcatcca gaactttctg gtaatcaacc gcttcagctt tgtagtagtt aaccaactgg
     5161 aagttgtgat attccatcac ttctttcagt ttttcagcga aggtttcttt gtcgaaaagg
     5221 tcgccaacac gcagaccgcg acgtgccact ttatcttcat aagcaggccc gataccacga
     5281 ccggtggtgc cgatcgcttt cgcgccacgc gctttctcac gcgcgttatc cagcgcaacg
     5341 tgataatcaa ggatcagcgg acatgcttca gacagcagca gacgctcacg aacggggatg
     5401 ccacggtctt ccagttcttt catctctttc atcagcgcgg ccggagacag cacaacaccg
     5461 ttaccgatga tgctggttac attctcgcgg agaatacctg atggaataag atggagaacg
     5521 gttttttcac cgttgattac gagagtatgg cctgcgttgt gaccgccctg gtagcgtaca
     5581 acatatttag ctcgttcagt cagaagatcg acgatcttac ctttaccttc gtcaccccat
     5641 tgggtgccca gtacgacgac gttgttaccc atttttcaaa atcaccgttt gcttaaaaat
     5701 ggattctacc atcgcttttt cagagttaca gcactttttg cactcaaaaa tgacctcgat
     5761 cagtctgttt tttgttcagc caatcgtttt cctcaacatg tagtagacca caacgcccgc
     5821 aaccacaagt ccaccgccaa aacgacgtaa aatattatcg ggcaaattgg tcatcgcaga
     5881 gatcatcttc ttccatgcct tcgggtaaag catcggccct aaaccttcca gtaccaaaac
     5941 cagggcaagc gccagccaga ttgtcgaatt cattcattat ccttatagaa aaagaaaacc
     6001 accgacatcc ctgaggatgc ggtggcttta ttgacctgta ccgcagtcgt tatattaacg
     6061 cgttgcggaa gtcggcgtct tcatgtagcg gaagaaatcg ctatccgggc tcatgaccat
     6121 cacgtcctga ttgccagaga agctgttctc ataagcacgc aggctacgga tgaatgcgta
     6181 gaagtccgga tctttactga atgcatcagc aaacagtttg gctgcttcgg catcgccttc
     6241 accacgcatg atgcggccct gacgctcagc ttctgccagc gttctggtca cttcatagtc
     6301 ggcagtcgcg cgcagttttt ccgcttcttc ctgaccttgt gaacggtgac gacgcgctac
     6361 cgcttcacgc tcggcgcgca tacggttgta gatcgcttca gacacttcgg tcggcaggtt
     6421 gatctgcttg atacgcacat cgacaacttc aatacccagc gccgccatac tgttcgggtt
     6481 gatgaccgga actttgccct tcgtctcagc cgttacgcgc tctgccgctt cggcaatggc
     6541 gttatctgct gccggggtag taacttcatc ttctgtaccc gcagaaccgg agttcagcgc
     6601 gtcacgtact tcgagggtca gacgaccacg ggaatcagtg acgatatctt tcacgtccag
     6661 gcgaccaatt tcagaacgca gacggtcaga gaacttacgt ttcaacagca cttccgcttg
     6721 cgaaatgtcg ccaccacccg ttgccaggta gtaacggctg aaatcgctga tgcgccattt
     6781 gatgtaagag tcgacgatca ggtctttctt ctctttggtc acaaagcggt cggcctggtt
     6841 gtccatggtc tgaatacgtg cgtcgagcat tttcaccgtt tcaatgaacg gtatcttgaa
     6901 atgcagaccc ggctcataaa ccagaggttt gttgtcatcg tcacgcagta ccttaccaaa
     6961 acgcagcgta ataccgcgct caccttcttt gacgacaaag acagacatgt aaagcactac
     7021 cagcacgatg atgataatcg cgataactga cttacgcatc gttattcccc ctgacgctgg
     7081 tagtcgttac gctgcgcgtt ggcgcggcgt tggtccataa tatcgccctg actggtggac
     7141 gacgtgttgc ttgctccact ggttgtggag gaagaggctg gcggcaaacg cagcagattg
     7201 ctggcaccgt tatcgctctt cgccgcaggg gcgttaccac ctttcagcat ctggtctaac
     7261 ggcagaacca tcaggttgcc acctttatcg ttaaccagca ctttgcgggt gttacccaac
     7321 actttttcca tcgtctcgat atacagacgc tcgcgagtaa tttccggcgc ggctttatat
     7381 tccggcagaa gtttagcaaa gcgcgccact tcaccctgag cttccaggat ggtctgggcc
     7441 ttgtacgcac gcgcctcttc gaggatacgt tgcgcctgac cgttcgcacg cggctgaact
     7501 tcgttggtat acgcttctgc ttcacgaatg tattgctgtt cgttttcacg cgcggcaatc
     7561 gcatcgtcaa acgccgcttt tacttcttcc ggcggacgag cagcctggaa gttgacgtcc
     7621 agcagagtga tgcccatgtc atacggacga atcgtctctt ccagttcgcg ctgggtatcg
     7681 ctacgaatca cggtacgacc ttccgtcaga atgcggtcca tggtgtattt accgataacc
     7741 ccgcgcaggg cgctgtcggt agcctgacgc aggctgtcat ccgggctggt cacgctatac
     7801 agatattttt ccggataggt aacgcggtac tgcacgttca tctcaacgcg cactacgttc
     7861 tcgtccgacg tcagcatcac accggaagcg gccagttcac gcacggcttc cacgtttacc
     7921 ggtttgactt cgtcgataaa cgtcggtttc cagttcagac ccggctcaac cagatggctg
     7981 aatttaccaa agcgtgttac cacgccgcgt tcggcttctt taatggtata gaaaccactg
     8041 gccgcccaga taatgacaat cgctgccgct gcgatggtaa cgacacgacc gccaagctgc
     8101 gggcgcgggc cttgcgatga actgccaccg ccagatccgg tgcctttacc gccgcccaga
     8161 ccaccgagct ttttgctcag tttgcggaag atatcatcta aatcaggtgg cccttgatcg
     8221 cgaccgcctt tgtttccatt tccctcagag ttgccgccag gtttgctgct tccccacggg
     8281 tcgcggtctt gtccgttatt accgggctga ttccacgcca tgtttgtgct ccatatttgt
     8341 tatgcggtga tccctgttgt ctttcgacgc cagaggatat gactccacgc ttcagacgct
     8401 acgccgttag atcaggtaat cgatcaacgc cggttcttgt ttacagaggc gacgccagtc
     8461 aacgatcggc atacgaactt gcagacttac gctgccgtcc tcctccatcc actctttttc
     8521 tattgcctga agctgataaa aacgacttct cagacgccct tcctgcggtg gcagacgcaa
     8581 tgtatgctgc gccacctcgc cggaaagccg ctccgtcaaa gcctgaaaaa gctgtggtat
     8641 ccccgctccg gtctgtgcgg aaagccagac acggatcggt ttgttctctt cgtcccgatc
     8701 aatacgcggt tcgaaatctt ccagcatatc gatcttgttc atcaccagca gggttgggat
     8761 ctcgtgagcg tcgatctctt caagaaccgt attcaccgct tcgatgtttt cttgtacacg
     8821 cacatccgcc gcatcaatga cgtgcagcag taatgtggct tgccgcgtct cttgtaacgt
     8881 ggctttaaat gccgccacca gatcgtgcgg cagatggcga ataaacccta cggtatctgc
     8941 aagtacggtt tcaccgacat ccgcgacgtc aatacgccgc aacgtcgggt cgagggtggc
     9001 aaacaactgg tctgccgcgt agacccgcgc ttcggtgatg cgattgaaaa gggtagattt
     9061 accggcgttg gtatatccca ccagcgaaac agtaggaacg tcggctttga tacgcgattg
     9121 ccgcccctgc tcacgctgct tttcaactct ttccaggcgc gactgtatct gcacgatgcg
     9181 attacgcaac aaacgacggt cggtttcgag ctgggtttca cccggaccac gcaaacctat
     9241 cccgcctttc tgtctttcaa ggtgggtcca gccacgcacc aggcgcgtag ccagatggcg
     9301 cagctgcgcc agctcaacct gcaacttacc ctcatgggta cgcgcacgtt gggcgaaaat
     9361 atctaaaata aggccggtgc ggtcgatgac acgacactcg cacaaacgct ccaggttacg
     9421 ctcttgcgcc gggctcaggg catggtcaaa aagaacgacc gaagcacccg tcgctttgac
     9481 agcttccgca atttcaactg ctttaccttc acctacaaaa tactttgggt gcggcgcttt
     9541 acggctaccg gtaatcacct gcaatgcttc gacaccggcg gaagaaacca gagattcaaa
     9601 ctcctggagg tcttccatat ctttgtcttt cgtaaaatag atgtgtacca gtaccgcctg
     9661 ctcaccagca tcataacggt caaacaagcg tataaccctc taaatagatc agcggggaac
     9721 gcaggatcgc tggctccccg tgtaaaaaaa acagcccgaa accttattcg gtttcttcgc
     9781 tgtcctgttg cgcggaagta ttctgcgcgc tgctaccatg atggtagtta ctgctggtac
     9841 cgccaccggc gttgttactg tgatgagaaa ccggacgaga cgggacaaca gtagaaatcg
     9901 cgtgcttgta aaccatctgg ctgaccgtgt ttttcaacag gatcacgaac tgatcaaaag
     9961 actcgatttg cccttgcagc ttaataccat tcaccaaata aatagaaact ggaacacgtt
    10021 cccgacgcag tgcgttcagg aacggatctt gtaaagattg ccccttagcc attctctctt
    10081 ttccttatat gcttatttgt actttgaacc tttcgattct gaaaaaattg cgcacgatac
    10141 gtctcaattg tacacattca gcctgcgata gcaccaacaa cctgtaatac ttcgtcacgc
    10201 gcctgttctg gtttttcact gtcaagccag tgaacccctt cccaaccacg cagccaggtt
    10261 atctgccgct tcgccaactg tctcgtggcg caaacacctc gataaaccat ttcatcgtat
    10321 gagatttcgc cttcaaggta agaccacatc tggcgataac ccacgcaacg aatggaaggc
    10381 aagtccgtat gcaaatctcc tcgggcaaaa agcgcccgga cttctgcttc aaaacctgaa
    10441 gccaacatct gatgaaaacg ctgctcaatg cgttgatgga gcagttcacg gctcgccggg
    10501 gcgatggcga actgatgcac ctgatacggt agagcgtctc ctgacgtttg cgtcagttcc
    10561 gttaaagttt tacccgaaat gaaaaaaact tccagtgccc gggaaagcct ttgtggatca
    10621 tttggatgaa tccttgctgc cgcaaccgga tctacctcct gaagttgacg atgcaatgac
    10681 tcccaacctt gctctgccgc ctgttgctca attctggccc gcacttccgg gtctgccgac
    10741 ggtagcggcg acaacccttc cagcaatgcc ttgaaataca acatcgtacc gcccactaac
    10801 agtgggatcc gccccgccgc ggtgatatcg gccatttccg ccagcgcatc gcggcgaaaa
    10861 tcagcagccg agtaagcctg cgacggatcg cgaatatcca gcaatcggtg cggcgcggcg
    10921 agtaactctt cagcgttcgg cttcgccgtc ccgatatcca tccctttgta aataagggca
    10981 gaatcaacgc ttatcaactc tactggtaaa attttacgca gctcaatggc taacgccgtt
    11041 ttaccggagg ccgtcggccc catcaaaaaa atcgccttag gcaggctcgc cttactgata
    11101 tcactcatct ttcagggctt ttatcgccgg atgtaaatca acagattgta acagaccacc
    11161 cggcggcgtt ttcacaagtt gcggacataa ccgttccacg tccgccagca gggttatggc
    11221 ctgtgccatt gaccactgcg catgttcgct catcagattt cgtgcaatcc actgcgcaat
    11281 attgccaggt tcgaatacgg actgcttcgc caggtagcct atcagttcag gaatcaagat
    11341 ttgtaaattt tgttggcgta agggtaaagg cacggccctg atggtcacat gctgtgcatc
    11401 tgactggaaa tcaataccca attccgccag ggcagactgc gctttttcta atgccgattt
    11461 ttcttcgcca gaaactttta gccgcaacgg aataagcagc ggctgagcgc aaactggcgc
    11521 ttcacccggg gtcagttgta cctgacgcag ccaacgttct gccactggca aggctaaaag
    11581 tgaaatgttg ccgtcgcgct ccagcaacgc acagtcggaa tggacgatag tcagtacccg
    11641 accaaaactc tgactgttcg ccgcaagtgc aggttcctgc ggttccggcg cttttaattt
    11701 ttgcatcggc gcgggcgttt gcaaaagctg gcgatacact tcaccttgct gtttctggta
    11761 gcctggctgc gcattcggcc aaggggcagc cggacgactg cctgatgctg gcgcaggagt
    11821 gtagcgcgga gctaccggct cacgagctgc cggttctgca aagtgattgc gccccgccgc
    11881 cacgcggttt tccggaatgg aacgcggtgc aggttggggt tcatcgtcca gcggtagcgg
    11941 cgtttccagt tgctgttgta gcacgctcag cacgccctga tagataaaat catgcaccag
    12001 acgcgactga tggaaacgca cttcgtgttt ggcggggtgc acgttgacgt ccacctgatg
    12061 cggatcgatc tccagataca gcacaaatgc cggttgctga tcggccccca gtttgtcttc
    12121 gcaggcctgg cggatcgcgt gattgatcag gcgatcgcgc atcatgcgac cgttcacgta
    12181 gcaatactga atttctgcca gtgcgggcgt ggtgtgattt ggatcggcca cccagccgcg
    12241 tagcgtgaga tcgccgtgtt gccattcaat cgccagcgct tgttcaagaa aagcggtgcc
    12301 gcaaatcgcg cctaagcgcc gttctttttg cccgccttcc ggcactgcgc ggtactgacg
    12361 cacaatttta ccgttatgcg acaggttgat cgtgacgtcg aaacgcgcca gcgcaatgcg
    12421 gcggatgatc tcatcaatgt ggttaaattc ggttttctcg gtgcgcagga atttgcgccg
    12481 cgccggggtg ttgtagaaca gatccagcac ctccagcgtc gtccccacag gatgcgccgc
    12541 cggttttacc gtcacgttca tatcgcgccc ttcggcatag gcctgccagg cttcctgctg
    12601 ttctgcggtg cgtgaagtga gcgtcaggcg ggaaaccgaa ctgatactcg ccagcgcctc
    12661 accgcgaaag cccaggctga taatggcttc gagatcgtcc agagaggcga ttttactggt
    12721 ggcatgacga gccagcgcca gcgccagctc atcttttttg ataccgcagc cgttatcacg
    12781 aatgcggata agtttcgccc caccgcgttc gatatcaata tcgatacgcg tcgcacctgc
    12841 atcgaggctg ttttccacca gttctttgac taccgacgca ggtcgctcga ccacctcacc
    12901 tgcggcaatc tggttcgcca gttgtggcgg taagacctga attggcatca atcgtcctta
    12961 gtttggcagc gtgcgatctg gcgtcgtcac cgtactggcc gtttgtgccg ttgcaccctg
    13021 cggcgcagat tgcatcggat gcgcaaggaa ataattgcgc aggcctttgt aaatggcttc
    13081 tgccagctgt tgttggtaat cgtcgctcgc cagcaaacgt tcttcgctgt tgttgctgat
    13141 aaaaccggtt tcgaccagta ctgacgggat atccggcgaa cgcagaacgc cgagactcgc
    13201 gtgttctggt cggcgtttat gtatttcgcc aatgcgttgc aactgactga tcatactggt
    13261 cgctacatca taccctaccc gctgggaatg accgaactgt aaatccagca ccgcctggct
    13321 taaataggga tcagactgac tgttcgccag cacatcgccc gccccaccca gcagctccga
    13381 atgtttctcg tgctgctcca gccagctggc catttcgctg ttggcgcgac ggttagagag
    13441 cacccatacg gaagcgccag tcgcactgcg gttcggtgcg gcatcagcgt gaatcgacac
    13501 gaggaaatta gcgttttgct tacgtgccac atcgctgcgc cccatcaccg aaataaagta
    13561 atccccgtca cgggttaaaa cgcctttaaa catcggatcg tcattgagca aagtacgcaa
    13621 tttacgcgcg atggcgatgg tgacattttt ctcccgcgta ccaccggggc cgatagcgcc
    13681 agggtcctga ccgccgtgtc cggcatcaat agcgatgata attttatcgc cagtgttagc
    13741 cgtcgcgcgc gctgccggac gcgttaccgt attactgctg ataacacccg tagtgcggtt
    13801 actttccgtt ttaaacggat tgcgcgccgg ttcgctgacg cgcggtgcga caaccgcagg
    13861 cgtttcaacg cgtttcgcaa ccacgggcgg cggaggaggc ggtggcggca catcggcgtt
    13921 aatcgtaaag acgacagtgt aattgctgcc attctgccgc ttcaccgctt cggttttacc
    13981 attttcggta agatcgacca ccagccgtag cgtttgtgca tctttaggcg ttccagagcg
    14041 aatcgccttc accagattat tgccgctgaa caacaacggc agtccctgaa tcacgcccgt
    14101 ttgtttgata tcgagcgcca cggtgcgttt gctttgatgg ctaaacgcat aatcaggatc
    14161 gccaataaaa ctcaacgtta tccgcgcctg ttgattaccg ttagaaacct gaatatcaga
    14221 gagcgtcgcg gcacccaccg gcgtgcacag cagcagcagc gtcgctacca accaatttct
    14281 gatgcgatac atcatcccgc cacctttcaa aggttaaccg gctaaacgcg ccagcaacaa
    14341 ttcacccgca gaggaaaccg cactcacgcg cgcctcacgg ccttgtgcct gataatcaat
    14401 gtgtatttcg acatccgggt caggaagaac acctgtacct tgttgtggcc actccaccag
    14461 gcagatggca tcgttggcaa aataatcgcg gatccccata aactccagct cctcgggatc
    14521 ggcaaggcgg tacaaatcaa agtgataaac cattaaattg tcgagcgtat agggttcgac
    14581 cagcgtataa gtggggcttt tgacattacc ctgatgaccc agagcttgta aaaagccccg
    14641 gctaaaggtg gtcttacctg cgcctaaatc gccatacaga tagattacgg ttgcgccatc
    14701 gcaggctttc gctacccgct cgcccaggtc taatgttgcc tgctcatcag ggagcggaat
    14761 tactcgattc atcatggttt ttatcagtca cttccgggtt aacaatacgc tgtagcgtgg
    14821 aaaagagatc ggttgccagc atcccgcgcg ttccaaaacg cgccgccagt acgtcagctg
    14881 ccgcaccgtg cgcgacacag cccgcacagg cggcatcata cggcgacagt ttttgcccaa
    14941 gcaatgcgcc aataatacca gagagcacat cgcccatgcc gccgctcgcc atgcctgcat
    15001 ttccggcatc aataatgcct aaagcgtcag gatgggcggc gaccacggtt ccggcacctt
    15061 tcagcaccgc tacgccgcca taacgttgta ccagacgttt ggcgcaatgt aagcggtcac
    15121 tttcaatttc agcgacggaa cagcctaaca accgtgcggc ctcgccagga tgcggcgtga
    15181 tcacgcgatt gtgacgctta tcgggattga ttgccagcag gttcaatgca tcggcatccc
    15241 acaacatcgg tttgcgaaaa ttctcaactt tttgcagtgc ttttttcccc cactcttgct
    15301 ggcccagacc gggaccaatc accaccacat cggcccattc caggctttcg gtaagagagt
    15361 ccatcgtcag ttcatgcacc atcaattccg gtcgtgcagt cagcagcggc gcaatgtttt
    15421 cactgcgggt cagtactcgg actaaaccag caccagcacg cagcgccgct tcccccgtca
    15481 tacgaatagc ccccgccgtg ccgtgatcgc caccgataat taccagccgc ccgtgatcgc
    15541 ctttatgcga agtcgggcga cgcggtttta gccagtgaga aagttgttct gctgaaaacc
    15601 gctgaatttt cgtctcctga cctgccagcc aactatccag ccccagtgag tcaaaatgca
    15661 gttgtccggt aacatcccgc gcttttccag tgagcaagcc tggtttcagc gcaataaaag
    15721 tgatggtgtg atcggcgttg atcaccgcgc ctggcgtagc gccagtttca gccagcaggc
    15781 cggaagggat atcaaccgcc acaatcggcg caggatggga attagcgtgg tcgattaact
    15841 ggctaatgga ttcgcggggc gcttgccgca aaccggtacc gagcagcgca tcaacaatca
    15901 gatctaccga ttcgggccag acaatattcg aagcatggat ctcgccaccc gcgtttaacc
    15961 atgcttcgcg tgccagcgcg gcctcttccg gcaacggttt gtcgctctcc tgggcaaaca
    16021 acgtgacctc aatgccgacc gctttggcca gtcgcgcgac cacgtagcca tcgccgccgt
    16081 tattaccatg accgcacagc accagccagt ggcgggcgtc aggatacgcc gaacgacaca
    16141 cctggaatgc ggcctcgcca gcgcgaagca tcagctcata gagtgtgagc cccagcacat
    16201 ctgccgcctc gcgttctccg cggcggatat cgtcggcgta ccagacggtg tgtggtatac
    16261 ttacggggtt tttcttcatt gtatggtccg tcatgtcaga gcccctcgat ctcaatcagt
    16321 tagcgcaaaa aattaaacag tgggggctgg aactgggctt tcagcaggta ggtattaccg
    16381 ataccgatct cagcgagtcc gagcccaaac tgcaagcatg gctggacaaa caataccacg
    16441 gcgaaatgga ctggatggca cgtcacggta tgctgcgcgc tcgccctcat gagttattgc
    16501 ccggtacgct gcgcgtgatc agcgtgcgga tgaattacct tcctgctaac gccgcatttg
    16561 ccagcacgct gaaaaacccc aaactcggct atgttagccg ttatgcgctg ggccgtgact
    16621 atcacaaact tctgcgcaac cgactcaaaa agctgggcga gatgattcag caacattgtg
    16681 tttcgctgaa ttttagaccg tttgtcgatt ctgcgcctat tctcgagcgc ccgttagctg
    16741 aaaaagctgg gctcggctgg acaggtaagc actcacttat cctcaatcgc gaggccggtt
    16801 cgttcttctt tttaggcgaa ttgctggtcg atattccgct gcccgtggat caaccagtcg
    16861 aggaaggatg cggtaaatgc gtggcctgta tgacgatttg cccgaccggt gccatcgtcg
    16921 agccatatac cgtcgatgct cgccgctgta tctcttatct caccatcgaa cttgaagggg
    16981 cgatcccgga agagttgcga ccgttaatgg gaaaccgtat ttacggttgc gatgactgcc
    17041 agcctatctg cccgtggaat cgctattcac aactcaccac agaagaggat ttcagcccgc
    17101 gtaagccgct acacgcaccg gaactcattg agttattcgc ctggagcgaa gagaagtttt
    17161 taaaagtcac ggaaggatcg gcgattcgtc gaattggtca cctgcgttgg ctgcgtaata
    17221 tcgccgtagc attaggcaat gccccttggg atgaaacgat tttgacagcg ctggaaagtc
    17281 gtaaaggtga gcacccactt ctcgatgagc acatagcgtg ggcgattgcg cagcaaatag
    17341 agagacgaaa tgcgtgcata gtcgaagtgc aattgccgaa aaaacagcgt ctggttcggg
    17401 tgattgaaaa agggttaccg cgtgacgcct gattcatcca cagcttgtga ataaaaataa
    17461 aaacgcattg caattcaaga cgaataaaat cgtcaagtga tcgactcgac aaaacggaat
    17521 cttaattttt aacttatcta tcaataggtt aaaaaaatac tattcaccgt gcgaagtttc
    17581 tttgaaatta agattacagc ctgaggctgt ggataactct gtttacaaga gtttgtcaga
    17641 gacaacgaaa accagcaata acgcatcgct gtggatattt tattgagaga agaatttgga
    17701 gcgggaaacg agactcgaac tcgcgacccc gaccttggca aggtcgtgct ctaccaactg
    17761 agctattccc gcttgggtgg tctgtgcctt acagcacttt tcaaattttg gagcgggaaa
    17821 cgagactcga actcgcgacc ccgaccttgg caaggtcgtg ctctaccaac tgagctattc
    17881 ccgcttgggt ggtctgtgct ttgcagcact tttcaaattt tggagcggga aacgagactc
    17941 gaactcgcga ccccgacctt ggcaaggtcg tgctctacca actgagctat tcccgcgtac
    18001 tacttaattt tgctttcgta attttcgcat ttctgcgtcg ttacgggagg cgtattatac
    18061 gagaaatctt tccctctgca accccccaaa aaagtttttt ttgcgttttt atctcaagtg
    18121 ctgaaattat cagcaagacg ttcaatttag cgtcaaaatc acgccgccgc aagtggattc
    18181 cggcgcttac gtgaccagga aaaattttac agcttgataa aatgctcgcg gtagtaagcc
    18241 agctccgcca ccgattcacg gatatcatcc atcgcctgat gcgtcccctg cttggtaaaa
    18301 ctatccagaa tttccggctt ccagcggcgc gccagctctt tcagggtgct gacatcgaga
    18361 taacggtagt ggaagtaggc ttccagctcc ggcatgtatt taaacaggaa acgacggtcc
    18421 tgtccgatgc tgttaccgca aatcggcgat tttcccgcag gcacccactg ttttaagaat
    18481 tcgagcgttg ccagttcagc ttcccgatcg cccatcgtgc tcgctttcac gcgctctacc
    18541 agcccgctgg cggtatgggt gcgcacgttc cagtcatcca tcagcgccag ctgttcatcg
    18601 gactgatgta ctgcaatggt cggcccttct gccagaatat tcaggttggc atcggtcacc
    18661 agcgtggcaa tctcaataat gcgatcgcgc tcgggatcca gaccagtcat ctcaagatcg
    18721 atccaaatca ggttgttttc attggcactc atgctatttt ccacccattc acagtgacta
    18781 tattgatcca caattgcgtg tatcatagat gttttgccca tcaggggcga ccaggagtct
    18841 gtacgattga gtaaaaataa actctccaaa ggccagcagc gccgcgtgaa cgccaatcac
    18901 cagcgtcgtc ttaaaacgtc taaggagaag cccgactacg acgacaatct gtttggcgag
    18961 cctgatgaag gtatcgtcat cagccgcttt ggtatgcacg ctgatgtgga atccgccgat
    19021 ggcgacgttc accgctgcaa tattcgccgt accatccgtt cgctggtgac cggcgaccgt
    19081 gtagtctggc gtccgggtaa accggcggcg gaaggcgtaa atgtcaaagg gatcgtggaa
    19141 gcggtgcatg agcgtacctc ggtgttgacg cgtccggatt tctacgacgg cgtaaaacct
    19201 attgccgcca acatcgacca gattgtcatt gtctccgcca ttttgccgga gctgtcactc
    19261 aatattatcg accgttacct ggtggcctgc gaaaccttgc agattgagcc gattattgtg
    19321 ctcaacaaga tagacctgct ggacgacgaa ggcatggcgt tcgtcaacga gcagatggat
    19381 atctaccgca atatcggtta tcgcgtattg atggtttcca gccatactca ggatgggcta
    19441 aaaccgctgg aagaggcgtt gaccgggcgc atcagcattt ttgccgggca gtctggcgtc
    19501 ggcaaatcca gcctgctgaa tgagttgctg gggctgcaaa aagagatcct gaccaacgat
    19561 gtctctgaca actcggggct cggtcagcac accacgaccg ccgctcggct gtatcacttc
    19621 ccgcacggcg gtgatgtgat tgattcccct ggtgtgcgtg agttcggcct ctggcacctg
    19681 gagccggaac aaatcactca gggctttgtc gaattccatg actatttagg tctgtgtaaa
    19741 tatcgcgatt gcaaacacga taccgatccg ggctgcgcta tccgggaagc ggttgaggaa
    19801 gggaaaatcg cggaaacccg tttcgaaaac tatcaccgta ttctggaaag catggcgcag
    19861 gtaaaaacgc gtaaaaactt ttctgatacg gatgactgac aattaagcta accgtcgtta
    19921 gaatcgtccc ctttttttca ggatccggca tgttggccgg atcaggaacg acaaaacaat
    19981 ggcctggagg ctaccttgtt aaattcattt aaactttcgc tacagtacat tctgccgaaa
    20041 ctatggctta ctcgcctggc gggttggggc gcaagcaagc gggcaggatg gctgacaaaa
    20101 ctggttatcg atctgttcgt taaatactac aaggtcgaca tgaaagaggc gcaaaagccg
    20161 gacaccgcca gctaccgcac ctttaacgaa ttctttgtcc gtccgctgcg tgacgaagta
    20221 cgcccaatcg ataccgatcc gaatgtactg gtcatgcctg ccgatggcgt tatcagccag
    20281 ttgggtaaaa tcgaagaaga taaaatcctg caagccaaag gccacaacta cagcctcgaa
    20341 gccctgctgg caggcaacta tctgatggcg gacctgttcc gcaacggtac gtttgtgacc
    20401 acttacctct ccccgcgtga ctaccatcgc gtacacatgc cgtgcaacgg tattctgcgt
    20461 gagatgatct acgtgccggg cgatctcttc tccgttaacc atctcaccgc tcagaacgtg
    20521 ccgaatctgt ttgcccgtaa cgaacgcgtg atttgccttt tcgataccga atttggccca
    20581 atggcgcaga ttctggtcgg agcgacgatt gttggcagca ttgagacggt ctgggcgggc
    20641 accattacgc cgccgcgcga aggtatcatc aagcgctgga cctggcctgc cggggaaaac
    20701 gacggttctg tggcactgct gaaaggccag gaaatgggtc gctttaaact cggttccacc
    20761 gttatcaacc tgtttgcacc gggtaaagtg aatctggttg agcaactgga aagcctgtct
    20821 gtcacgaaaa ttggccagcc gctggcagta tctaccgaaa cctttgttac gccagacgct
    20881 gaacccgccc cacttcctgc tgaagagatc gaagcagaac acgacgccag cccattggtt
    20941 gacgataaaa aagaccaggt ctaatccatc aaaggaaacg ctgacgtgcg cctgattatc
    21001 acttttctga tggcctggtg cctcagttgg ggggcgtacg ccgcgacggc ccccgatagc
    21061 aaacaaatca ctcaggaact ggagcaggca aaagcggcga aacccgcaca gccggaagtc
    21121 gtagaggcgc tccagtctgc cttaaatgcg cttgaggaac gaaaaggttc ccttgagcgc
    21181 atcaaacaat atcagcaagt tatcgataat tatccgaaac tctccgctac tctgcgcgca
    21241 caattaaaca acatgcgtga cgagccgcgc agcgtgtcgc cgggaatgtc taccgacgcg
    21301 ctgaatcagg aaattctcca ggtcagcagc cagttgctgg ataaaagccg tcaggcccag
    21361 caagagcagg agcgcacccg cgagattgcc gattcgctga atcaactgcc gcaacagcaa
    21421 accgacgccc gccgtcagtt aaatgagatc gagcgccgcc tgggaacgct taccggcaat
    21481 actccgctca atcaggcaca aaatttcgcg ttgcagtctg actctgcacg tcttaaggcg
    21541 ctcgttgatg aactggagct ggcgcagctg tctgccaata accgccagga attagcgcgc
    21601 ttacgctcag agctggcgga aaaagagagc cagcaactgg atgcgtattt gcaggccttg
    21661 cgtaatcaat taaacagcca acgtcagctt gaggcggagc gggcgctgga aagtaccgaa
    21721 ttgctggcag aaaacagcgc cgatttgccg aaagatatcg tcgcgcaatt caaaattaac
    21781 cgcgaactat cggcggcttt gaatcaacag gcgcagcgga tggatctcgt tgcctcgcaa
    21841 cagcgtcagg ctgccagcca gacgttacag gtccggcagg cgttgaatac gctgcgtgaa
    21901 cagtcgcaat ggctgggatc gtccaatctg ctcggcgaag cgctgcgggc gcaggtggca
    21961 cggctgccag aaatgccaaa accacaacag cttgataccg aaatggcgca gttgcgtgtg
    22021 caacggttac gttatgagga tctgcttaat aaacagccgc tgctacggca aatccatcag
    22081 gccgacggtc agccgctgac cgccgagcaa aaccgtattc tggaagcaca actgcgcact
    22141 cagcgtgagt tgctgaactc attgttgcag ggtggcgaca cgctactatt ggaactgacc
    22201 aagctgaaag tctccaacgg gcaactggag gatgcgctga aagaggtgaa cgaagcaacg
    22261 caccgctatc tgttctggac ctctgacgtg cgcccgatga ccatcgcctg gccgctggaa
    22321 atcgcccagg atctgcgtcg tctcatttcg ctggacacct tcagtcagtt gggcaaagcc
    22381 agtgtgatga tgctgaccag caaagagaca attttgccgc tgtttggcgc gttgattctg
    22441 gtcggttgca gtatttactc gcgccgctat ttcacccgtt ttcttgaacg ttcggcggcg
    22501 aaagttggca aagtgactca ggatcacttc tggctgacgt tgcgcactct tttctggtcg
    22561 attctcgtcg cgtcaccgtt accggtgctg tggatgacgc tgggttacgg cttgcgcgag
    22621 gcgtggcctt atccgctggc ggtcgcgatt ggcgatggtg taacggctac cgtgccgctg
    22681 ctgtgggtag tgatgatttg cgccaccttt gcccgcccga acggcttgtt tatcgctcat
    22741 tttggctggc cgcgcgaacg tgtttcccgt gggatgcgct actacctgat gagcatcggg
    22801 cttattgtgc cgctgattat ggcgctgatg atgttcgata acctcgacga ccgtgaattc
    22861 tccggttcgc tgggacggct ttgctttatc ctcatttgcg gtgcgctggc ggtggtcacc
    22921 ctcagcctga aaaaggccgg gatcccactg tatctcaaca aagagggcag cggcgacaac
    22981 attaccaacc atatgctgtg gaacatgatg attggcgcgc cgttggttgc cattctggcg
    23041 tcggctgtgg gttatctggc aacggcacag gcgctgttag cgaggcttga aacctcggtt
    23101 gccatctggt tcctgctact ggtggtttat cacgttatcc gccgctggat gctgatccag
    23161 cgccgcaggc tggcgtttga ccgggcgaag catcgccggg cagagatgtt agcgcaacgt
    23221 gcgcgtggcg aagaggaagc gcatcatcac agtagcccgg aaggagcaat tgaagtcgat
    23281 gaaagcgaag tcgatctcga tgccatcagt gcgcaatcct tgcggctggt gcgctcaatt
    23341 ttgatgttga tcgccctgct ttctgtcatt gtgctgtggt cagaaatcca ttccgctttc
    23401 ggcttcctcg aaaatatttc gctgtgggat gtcacctcca cggtacaagg cgtagaaagt
    23461 ctggagccaa ttaccctcgg tgcggtgctg attgccattc tggtgtttat catcaccacg
    23521 cagctggtgc gcaacctgcc cgcgctgctg gaactggcga ttttgcagca cctggattta
    23581 acgccgggta caggctacgc catcaccacc atcaccaaat atctgctgat gctgattggc
    23641 gggctggtcg gcttctcgat gattggtatt gaatggtcga aattgcagtg gctggtcgcc
    23701 gcgctcggtg ttggtctcgg ttttggtttg caggaaattt tcgccaactt tatctctggt
    23761 ctgattatcc tgttcgaaaa accgattcgc attggcgata cggtgacaat tcgcgatctc
    23821 accggtagcg tgacgaaaat taacacccgc gccaccacca tcagcgactg ggaccgtaaa
    23881 gagataatcg tgccgaacaa ggcgtttatt accgagcagt ttatcaactg gtcgctctct
    23941 gactcggtta cgcgcgtagt gttgacgatt ccggcccctg ctgatgccaa cagtgaagaa
    24001 gtgacggaaa tcctgctcac cgcagcgcgt cgctgctcgc tggtgatcga caacccggca
    24061 ccggaagtct tcctggtgga tctgcaacaa gggattcaga ttttcgagct gcgtatttat
    24121 gccgctgaga tgggtcaccg tatgccgcta cgccatgaga tccaccagct gattctggct
    24181 ggcttccatg cccacggtat cgatatgcca ttcccgccct tccagatgcg tctggaaagc
    24241 ctcaacggta aacaaacggg gagaacgctg acgtctgcgg gcaaaggtcg tcaggcggga
    24301 agtttgtaat gcatgaagct gccaaatgat gtcaacgtgg ctcatttagc agcttaacat
    24361 catcttcagt tatcaccggc cctggagagt atcatccata cgcattactt cctgacaact
    24421 catcgccgga gagacgatga gttgcaggat ttcatatgat cagtcgagag ctaactcagg
    24481 tttattcgcc atgcgactgc aatagttctg gtaaatcgcc atcgctaaca gcgagaagaa
    24541 gacagggccg ccaatcatcc acaatgtgct gtcccagtct ccggcttcaa ccacaggcgg
    24601 aataatggtg aagacgttcg caaatgtcac caccagtacg acaaccaccg tcgcaatcat
    24661 tgccgacata cgcgttttga aaatcacaaa tggtctgtcg agatcctgac gtgctttaaa
    24721 gaatgggaaa gccagcgcga ggaacaggta aggaagc
//
LOCUS       DAJVUK010000048        24740 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.048, whole genome shotgun sequence.
ACCESSION   DAJVUK010000048 DAJVUK010000000
VERSION     DAJVUK010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24740
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.048"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(48..338)
                     /locus_tag="OQQ57_001820"
     CDS             complement(48..338)
                     /locus_tag="OQQ57_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1956612.1"
                     /translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
                     TDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL"
     gene            complement(597..1478)
                     /gene="yddG"
                     /locus_tag="OQQ57_001821"
     CDS             complement(597..1478)
                     /gene="yddG"
                     /locus_tag="OQQ57_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415990.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
                     /protein_id="HCS1956613.1"
                     /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
                     GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATRHQAIEAGMVNYLW
                     PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGENGLHYDEIINNITTSPLSYF
                     LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTQQPEMVFSTPVMIK
                     LISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA
                     LMVCGGSLLCWLATRRG"
     gene            1710..4757
                     /gene="fdnG"
                     /locus_tag="OQQ57_001822"
     CDS             1710..4757
                     /gene="fdnG"
                     /locus_tag="OQQ57_001822"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:2295..2297,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HCS1956614.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIAVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLAGQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGERVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            4770..5654
                     /gene="fdnH"
                     /locus_tag="OQQ57_001823"
     CDS             4770..5654
                     /gene="fdnH"
                     /locus_tag="OQQ57_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase N subunit beta"
                     /protein_id="HCS1956615.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            5647..6300
                     /gene="fdnI"
                     /locus_tag="OQQ57_001824"
     CDS             5647..6300
                     /gene="fdnI"
                     /locus_tag="OQQ57_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HCS1956616.1"
                     /translation="MSKSKMIVRTKFIDRVCHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(6351..6635)
                     /locus_tag="OQQ57_001825"
     CDS             complement(6351..6635)
                     /locus_tag="OQQ57_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HCS1956617.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ"
     gene            complement(6781..7791)
                     /gene="adhP"
                     /locus_tag="OQQ57_001826"
                     /pseudo
     CDS             complement(6781..7791)
                     /gene="adhP"
                     /locus_tag="OQQ57_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415995.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
     gene            complement(7925..9622)
                     /gene="maeA"
                     /locus_tag="OQQ57_001827"
     CDS             complement(7925..9622)
                     /gene="maeA"
                     /locus_tag="OQQ57_001827"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HCS1956618.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     IDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            complement(9779..9916)
                     /gene="sra"
                     /locus_tag="OQQ57_001828"
     CDS             complement(9779..9916)
                     /gene="sra"
                     /locus_tag="OQQ57_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HCS1956619.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            complement(10018..10233)
                     /gene="bdm"
                     /locus_tag="OQQ57_001829"
     CDS             complement(10018..10233)
                     /gene="bdm"
                     /locus_tag="OQQ57_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HCS1956620.1"
                     /translation="MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            10579..11010
                     /gene="osmC"
                     /locus_tag="OQQ57_001830"
     CDS             10579..11010
                     /gene="osmC"
                     /locus_tag="OQQ57_001830"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
                     /protein_id="HCS1956621.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
                     GTNPEELIGAAHAACFSMALSFMLGEAGFTPTSIDTIADVSLDKVDAGFAITKIALKS
                     EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
     gene            complement(11066..11992)
                     /locus_tag="OQQ57_001831"
     CDS             complement(11066..11992)
                     /locus_tag="OQQ57_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1956622.1"
                     /translation="MSDTLLTLRGVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKRSSEQQRRALVEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATSGCEVRQSLAIREDGRELRCWRAL"
     gene            complement(11985..12971)
                     /locus_tag="OQQ57_001832"
     CDS             complement(11985..12971)
                     /locus_tag="OQQ57_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1956623.1"
                     /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
                     GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPM
                     TALNPTRRIGLQMMDVIRHHQPISRREARAKAIVLLEEMQIPDAVEVMSRYPFELSGG
                     MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
                     VVSQLCDSVYVMYAGSVIESGVRADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT
                     VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV"
     gene            complement(12968..13864)
                     /locus_tag="OQQ57_001833"
     CDS             complement(12968..13864)
                     /locus_tag="OQQ57_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HCS1956624.1"
                     /translation="MMLSEETSAVRPQKQTRFNGAKLIWMLKGSPLTVTGAVIIVLML
                     LMMFFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAM
                     LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQA
                     SLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAV
                     GFNLFGDGIRDLLDPKAGGKQS"
     gene            complement(13861..14883)
                     /locus_tag="OQQ57_001834"
     CDS             complement(13861..14883)
                     /locus_tag="OQQ57_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1956625.1"
                     /translation="MTFWSILRQRCWGLVLVMAGVCVITFIISHLIPGDPARLLAGDR
                     ASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLE
                     LAFCALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGH
                     LQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGI
                     VARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYG
                     AVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI
                     GRGGGE"
     gene            complement(14885..16435)
                     /locus_tag="OQQ57_001835"
     CDS             complement(14885..16435)
                     /locus_tag="OQQ57_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1956626.1"
                     /translation="MKRSIPFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLA
                     PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDN
                     AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL
                     YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP
                     GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR
                     VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA
                     MQYNHDETKAKAEWDKVTSKPTSLTFLYSDKDPNWEPIALATQSSLNKLGINVKLEKL
                     ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
                     LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV
                     FNINTMSK"
     gene            complement(16449..17030)
                     /gene="ddpX"
                     /locus_tag="OQQ57_001836"
     CDS             complement(16449..17030)
                     /gene="ddpX"
                     /locus_tag="OQQ57_001836"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HCS1956627.1"
                     /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
                     SEWWHFELPQAASYPLLADQFTCFISPGTQHVS"
     gene            complement(17288..19687)
                     /gene="dosP"
                     /locus_tag="OQQ57_001837"
                     /gene_synonym="pdeO"
     CDS             complement(17288..19687)
                     /gene="dosP"
                     /locus_tag="OQQ57_001837"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HCS1956628.1"
                     /translation="MKLTDAENAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW
                     TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ
                     CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT
                     GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE
                     IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGIL
                     QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
                     YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRGKLKPDQYLCRI
                     EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDVGKNHDYL
                     LSTAHNAIDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF
                     AETGELYGIEALARWHDPQHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS
                     QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK
                     RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI
                     TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK
                     I"
     gene            complement(19712..21093)
                     /gene="dosC"
                     /locus_tag="OQQ57_001838"
                     /pseudo
     CDS             complement(19712..21093)
                     /gene="dosC"
                     /locus_tag="OQQ57_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
     gene            complement(21465..22784)
                     /locus_tag="OQQ57_001839"
     CDS             complement(21465..22784)
                     /locus_tag="OQQ57_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 10 protein"
                     /protein_id="HCS1956629.1"
                     /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIT
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
     gene            complement(22915..24450)
                     /gene="gadC"
                     /locus_tag="OQQ57_001840"
     CDS             complement(22915..24450)
                     /gene="gadC"
                     /locus_tag="OQQ57_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HCS1956630.1"
                     /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
BASE COUNT         6179 a         6230 c         6226 g         6105 t
ORIGIN      
        1 gtgtaatata aggtcagtga tcatattgtg atgggcactt aactcaatca gagattcttg
       61 ccgcgcgagc cgttggcttc atcgttatag cctttaaaat catattccca gtgaccaaaa
      121 ccaatcattt gatcattgat ttgcgtttct cctttaaagc cgagacgggc ataagtttta
      181 tcaccatcgt cacgcttatc atcagtaaaa taacgtagag cggtaacctt gccataaagg
      241 tcgagtttat taccatcctt gttatagact tcggcagcgt gtgctacgtt cgcagctaac
      301 aaaccagtta caaccaccgc aactattttt aatttcattt aacagaatcc ttttaattat
      361 cgtcaaacgt attttctaaa cgaattttaa acggcgtcat ttataaatga catactgttt
      421 ttaaaataga atggtgatta aaaacaatga gaaaaataga tgagataata ttatttatcg
      481 atatgtgatc gaagtcgaaa tgagatataa ggtgaattac tggtatttga aatttatttt
      541 ttaatattgt cggaatttat ctgattaact gccgggccgt agacccggca attattttaa
      601 ccacgacgtg tcgccagcca gcagagcagg gaaccgccgc agaccattag cgcgccttgc
      661 cagaatgaga acgacagcgg ggcgctgagc agcacggctg caagcgctga ggaaagtacg
      721 ggcgtaaaat acgagcctac cgccattatg gtgacattgc catgcaatat accgacattc
      781 catgcagcat aagcaaatcc taaggtaaat gccgcagaga tgagtttaat catgacgggc
      841 gtgctaaata ccatttctgg ttgttgcgta agaaaatagt aaacccacag acttgctccc
      901 gttagcagga caaaaacggt aattccgtta aatccgcgtg cgtatttatt cgttactgtg
      961 caataggctg cccagataaa cgcaccaata aacgccagga aataactcaa tgggctggtg
     1021 gtgatattat tgatgatttc atcataatgt aacccattct caccgcctaa cacccagcag
     1081 acgccgacca gggctaataa taatcctggt acaatcagcc agttggtttt ctgaccatta
     1141 aacagaatgg caaagagaat tgtcaggctg ggccacagat agttcaccat acccgcttca
     1201 atcgcctgat gacgggtcgc cgcataccct aaggaaagcg ccagacagat ttcatagctg
     1261 acgaataaca gactcccggc gagtaaatag cctttcggaa tctgccgaat acgcggaaat
     1321 ccaaccgtga agattaacag cagcccgctt aatgaataga tagcagctgc gccgccgacc
     1381 gggccgagcc cctcgctgac accgcgaatc aatcctacca tcgtgctcca caggacgatc
     1441 gctattagcc ctatgagcgt tgctttttgt cgtgtcatgc tcgctgtttt gtctctcttg
     1501 ccgttaaaaa ttaagctgaa ttttatagca tttttttaac tggcctgtca ggcagtggtg
     1561 cgtttttcta ccgctattga ggtaggtcaa tttgcgcagg cggattattt tgtggcaaac
     1621 acgtgttctt tttgatttcg cgcaaaaaga ttcagaattt tactgttagt ttcctcgcgc
     1681 agtaatatcc ctgaaaaaag aggaaagcaa tggacgtcag tcgcagacaa ttttttaaaa
     1741 tctgcgcggg cggtatggct ggaacaacgg tagcggcatt gggctttgcc cctaagcaag
     1801 cactggctca ggcgcgaaac tacaaattat tacgcgctaa agagatccgt aacacctgca
     1861 catactgttc cgtaggttgc gggctattga tgtatagcct gggtgatggc gcgaaaaacg
     1921 ccagagaagc gatttatcac attgaaggtg acccggatca tccggtaagc cgtggtgcgc
     1981 tgtgcccaaa aggggccggt ttgctggatt acgtcaacag cgaaaaccgt ctgcgctacc
     2041 cggaatatcg tgcgccaggt tctgacaaat ggcagcgcat tagctgggaa gaagcattct
     2101 cccgtattgc aaagctgatg aaagctgacc gtgacgctaa ctttattgaa aagaacgagc
     2161 agggcgtaac ggtaaaccgt tggctttcta ccggtatgct gtgtgcctcc ggtgccagca
     2221 acgaaaccgg gatgctgaca cagaaatttg cccgctccct cgggatgctg gcggtagaca
     2281 accaggcgcg cgtctgacac ggaccaacgg tagcaagtct tgctccaaca tttggtcgcg
     2341 gtgcgatgac caaccactgg gtggatatca aaaacgctaa cgtcgtaatg gtaatgggcg
     2401 gtaacgctgc tgaagcgcat cccgtcggtt tccgctgggc gatggaagcg aaaaacaaca
     2461 acgatgcaac cttgatcgct gtcgatcctc gttttacgcg taccgcttct gtggcggata
     2521 tttacgcacc tattcgttcc ggtacggaca ttacgttcct gtctggcgtt ttgcgctacc
     2581 tgatcgaaaa caacaaaatc aacgccgaat acgttaaaca ttacaccaac gccagcctgc
     2641 tggtgcgtga tgattttgct ttcgaagacg gcctgttcag cggctacgac gctgaaaaac
     2701 gccagtatga taagtcgtcc tggaactatc agttcgatga aaacggctat gcaaaacgcg
     2761 atgaaacact gactcatccg cgctgtgtgt ggaacctgct gaaagcgcac gtttcccgct
     2821 acacgccgga cgtcgttgaa aacatctgcg gtacgccaaa agccgacttc ctgaaagtgt
     2881 gtgaagtgct ggcctccacc agcgcaccgg atcgcacaac caccttcctg tacgcgctgg
     2941 gctggacgca gcacaccgtg ggtgcgcaga acatccgtac tatggcgatg atccagttgc
     3001 tgctcggtaa catgggtatg gccggtggcg gcgtgaacgc attgcgtggt cactccaaca
     3061 ttcaggggct gactgactta ggtctgctct ctaccagcct gccaggttat ctgacgcttc
     3121 cgtcagaaaa acaggttgat ttgcagtcgt atctggaagc gaacacgccg aaagcgacgc
     3181 tggctggtca ggtgaactac tggagcaact atccgaagtt cttcgttagc ctgatgaaat
     3241 ctttctatgg cgatgccgcg cagaaagaga acaactgggg ctatgactgg ctgccgaagt
     3301 gggaccagac ctacgacgtc atcaagtatt tcaacatgat ggacgaaggc aaagtcaccg
     3361 gttatttctg ccagggcttt aacccggttg cgtccttccc ggacaaaaac aaagtggtga
     3421 gctgcctgag caagctgaag tacatggtgg ttatcgatcc gctggtgact gaaacctcta
     3481 ccttctggca gaaccacggc gagtcgaacg atgtcgatcc ggcgtctatt cagactgaag
     3541 tattccgtct gccttcgacc tgctttgccg aagaagatgg ttctatcgct aactccggtc
     3601 gctggttgca gtggcactgg aaaggtcagg acgcgccggg cgaagcgcgt aacgacggcg
     3661 aaattctggc gggtatctac catcatctgc gcgagctgta ccaggccgaa ggtggtaaag
     3721 gcgtagaacc gctgatgaag atgagctgga actacaagca gccgcacgaa ccgcaatctg
     3781 acgaagtggc taaagagaac aacggctacg cgctggaaga tctctatgac gctaatggcg
     3841 tgcttattgc gaagaaaggt cagttgctga gtagctttgc gcatctgcgt gatgacggta
     3901 caaccgcatc ttcttgctgg atctacaccg gtagctggac agagcagggc aaccagatgg
     3961 ctaaccgcga taactccgac ccgtccggtc tggggaatac gctgggatgg gcctgggcgt
     4021 ggccgctcaa ccgtcgcgtg ctgtacaacc gtgcttcggc ggatatcaac ggtaaaccgt
     4081 gggatccgaa acggatgctg atccagtgga acggcagcaa gtggacgggt aacgatattc
     4141 ctgacttcgg caatgccgca ccgggtacgc caaccgggcc gtttatcatg cagccggaag
     4201 ggatgggacg cctgtttgcc atcaacaaaa tggcggaagg tccgttcccg gaacactacg
     4261 agccgattga aacgccgctg ggcactaacc cgctgcatcc gaacgtggtg tctaacccgg
     4321 ttgttcgtct gtatgaacaa gacgcgctgc ggatgggtaa aaaagagcag ttcccgtatg
     4381 tgggtacgac ctatcgtctg accgagcact tccacacctg gaccaagcac gcattgctca
     4441 acgcaattgc tcagccggaa cagtttgtgg aaatcagcga aacgctggcg gcggcgaaag
     4501 gcattaataa tggcgagcgt gtcactgtct ccagcaagcg tggctttatc cgcgcggtgg
     4561 ctgtggtaac gcgtcgtctg aaaccgctga atgtaaatgg tcagcaggtt gaaacggtgg
     4621 gtattccaat ccactggggc tttgagggtg tcgcgcgtaa aggttatatc gctaacactc
     4681 tgacgccgaa tgtcggtgat gcaaactcgc aaacgccgga atataaagcg ttcttagtca
     4741 acatcgagaa ggcgtaaggg ggcgaacaga tggctatgga aacgcaggac attatcaaaa
     4801 ggtccgcaac taactccatc acgccgcctt ctcaggtgcg tgattacaaa gcagaagtcg
     4861 caaaacttat cgacgtttcc acctgtatcg gctgtaaagc ctgtcaggtg gcgtgttcgg
     4921 agtggaacga catccgtgat gaagtggggc actgcgtcgg ggtttacgat aaccccgccg
     4981 atctgagcgc caagtcctgg acggtgatgc gctttagcga aaccgaacag aacggcaagc
     5041 tggagtggct gatccgtaaa gacggctgta tgcactgtga agatcccggc tgcctgaagg
     5101 cgtgcccgtc tgctggtgca atcattcagt acgctaacgg gattgtcgat ttccagtcgg
     5161 aaaactgcat cggctgtggt tactgcattg ccgggtgtcc gtttaatatt ccgcgcctca
     5221 acaaagagga taaccgggta tataaatgca cgctctgcgt cgatcgcgtc agcgtcggcc
     5281 aggaaccggc ttgtgtgaaa acctgtccga ccggggctat ccacttcggc accaagaagg
     5341 agatgctgga gctggcggaa cagcgcgtgg cgaaactgaa agcgcgtggt tacgaacatg
     5401 ctggcgtcta caacccggaa ggggtcggtg gtacgcacgt tatgtacgtg ctgcatcacg
     5461 ccgatcagcc ggagctgtat cacggtctgc cgaaagatcc gaagatcgac acctcggtaa
     5521 gcctgtggaa aggcgcgttg aaaccgctgg cagcggctgg ctttattgcc acttttgccg
     5581 ggttgatttt ccactacatc ggtattggcc cgaataagga agtggacgat gacgaggagg
     5641 atcatcatga gtaagtcgaa aatgattgtg cgcaccaaat ttattgatcg cgtctgtcac
     5701 tggaccgtgg tgatttgctt cttcctggtg gcgctgtccg ggatttcgtt cttcttcccg
     5761 acgctgcaat ggctgacgca aaccttcggt acgccgcaga tgggacgcat tttgcacccg
     5821 ttcttcggca ttgcgatttt cgtcgcgctg atgtttatgt ttgtgcgttt tgtgcatcac
     5881 aacatcccgg ataagaaaga tattccgtgg ctattgaaca ttgtcgaagt attaaaaggc
     5941 aatgagcaca aagtggcgga tgttggtaag tacaacgccg ggcaaaagat gatgttctgg
     6001 tcgatcatga gcatgatttt cgtgctgttg gtgaccgggg tgattatctg gcgtccgtac
     6061 tttgcgcagt acttcccgat gcaggttgtt cgctacagcc tgctgatcca cgcggctgcc
     6121 ggtatcatcc tgatccacgc catcctgatc catatgtata tggcattctg ggtgaaagga
     6181 tcgattaaag ggatgatcga agggaaggta agccgtcgct gggcgaagaa acaccatccg
     6241 cgctggtatc gtgaaatcga gaaggcagaa gcgaaaaaag agagtgaaga agggatataa
     6301 tctcttttga actttaagct gaaaatggcg ctttaagaag cgccattttt ttattgcgta
     6361 accagacggc gcagtcgcga cacatccacc gttttttcag cctctgccag actccaggcg
     6421 ttttgcagat tcagccacat ttgcggcgaa ctgccgatca ccacggaaag tttaattgcc
     6481 atttctggcg tcaaagctgc ttttccggtc agcaatcggc ttgccgttga gggcgcaatt
     6541 tccattgctc tggcaaactc gcgcaggctg acattaagtt cgtccagtga ttcctgaata
     6601 atgtcccccg ggcggggatg attggccatt ttcattagtg tctttactct cagtagcgtt
     6661 ccttctctgg gaacactatc attattgttc cttcctacgc aacaataatc catttagcca
     6721 tttcatgttg gagagtgtgc gatgctgcga cccgaacatg ggagtcgcag caaagacctc
     6781 ttagtgacgg aaatcaatca ccatacggcc acggattttg ccttcttcca tctcggtaaa
     6841 gatggtgttg atgtccgcta acggacgcag ggcgactttc ggcaccactt tgccttcggc
     6901 ggcaaactgg aaggcttcgg ttagatcctg gcgcgtgccg accagcgaac cgaccacttc
     6961 aatgccatcc agcacaagac gtgggatatc caggctcata gactccggcg gcagaccgac
     7021 agccacaaca cgaccgcctg cacggacagc atcaactgcc gagttaaacg cagctttagc
     7081 tactgctgtt accaccgcag cgtgagcgcc accggttttc tcctgcacaa tttaggcggc
     7141 gtcttcggtg cgtgagttaa tcgctaaatc tgcacccatt tcggttgcca gttttaactg
     7201 ctcatcattg acatcaatgg cgatcacttt ggcgttaaag acattcttcg cgtattgcag
     7261 ggcgaggtta cccagaccgc caagaccgta gatagcaatc cactgaccgg gacgaatttt
     7321 tgacagttta acggctttgt aggtggtgcc ccccgcacag gtaatgctgc tggccgccgc
     7381 cgagtccaga ccatctggca cttttaccgc gtaatcggcg accacgatgc actcttccgc
     7441 catcccgcca tcaacgctgt atccggcatt tttaactgaa cggcagagcg tttcgttacc
     7501 actgttacag tattcgcaat gaccgcatcc ttcgtaaaac cacgccacgc tggcacgatc
     7561 gcctggtttt aatgaggtga cacctgggcc aacttctgcc accacaccga tgccttcatg
     7621 gcccagaatt accccagttt tgtcaccaaa atcgccattc ttaacatgaa gatcggtatg
     7681 acatacacca caacactcca ttttcagcag ggcttcgcca tgtttcagtg agcgcagtgt
     7741 tttatccgta acgtcaacat gatgatcctt cgtaacaact gcagccttca tagttcctcc
     7801 ttttcggatg atgttctgca tagcaggtga ggcaaatgag atttattcgc cactacccag
     7861 tatggatgag atctgaaaaa gggagaggga aatagcccgg tagccttcac taccgggcgc
     7921 aggcttagat ggaggtacgg cggtagtcgc ggtattcggc ttgccagaaa ttatcgtcaa
     7981 tggcttgttg caaagcttca gcagacgttt tcaccgccac gccttgctgc tgcgccattt
     8041 tgccaaccgc aaacgcaatt gcgcgggaga ctttctgaat atctttcagt tccggtagta
     8101 ccagaccttc gccgttcagc accagcggcg aatactgagc aagcgtttca cttgctgaca
     8161 tcagcatctc atcggtgata cgtgacgcgc cggaagcaat aacacccagc ccgatgccag
     8221 ggaaaataaa ggcgttgtta cactgggcga tagggtagat tttatctttc cataccactg
     8281 gattaaacgg gctgccagtg gcgaccagcg cgttaccttc ggtccaggcg ataatgtcct
     8341 gcggtgtggc ttccacgcgt gacgtcgggt tagacagcgg catcacgatc ggacgcggac
     8401 agtgtttatg catctcacgg atgatctctt ccgtaaacag cccggtctgt cctgagacgc
     8461 caatcagaat atctggtttt acattgcgca ccacatccag cagtgacagc acatcgctgt
     8521 cggtatccca gtcactgagg ttttcgcgtt tctgcaccag tttggtctgg aaaggcagca
     8581 ggttcggcat cttgtccgtc agcaggccaa agcgatcgac cataaagact ttctgccgcg
     8641 ccgcttcctc gcttaatcct tcgcgctggg tctgggcgat gatcatttcg gcaatgccgc
     8701 atcccgctga acctgcacca aggaagacga tttttttctc gcttaactga ccacctgccg
     8761 ctcggcttgc tgcgatcagt gtgccgactg ttaccgccgc agtgccctga atgtcatcgt
     8821 taaaagaaca aatttcattg cgatagcggt taagtaacgg catcgcattt ttttgagcaa
     8881 agtcttcaaa ctgcaacagc acgtctggcc agcgttgttt cacagcctgg ataaattcat
     8941 caacgaattc atagtattcg tcgtcaatga tacgcggatt acgccagccc atatacagcg
     9001 gatcgttaag cagctgttgg ttgttcgttc cgacatccag caccaccgga agggtatacg
     9061 ccgggctgat gccgccacag gcggtataga gcgacagttt accgatcgga atgcccatcc
     9121 cgccgatgcc ctggtcacca agccccagaa tacgttcacc gtcagtcacc acaatcactt
     9181 tgatattatg gttcggtacg ttttgcagaa tatcgtccat attgtggcgg ttctggtaag
     9241 agataaacac gccgcgtgaa cggcggtaga tctcagaaaa acgctcacag gctgcgccga
     9301 cggttggggt ataaataaca ggcatcatct catcaagatg attgtttacc agacggtaga
     9361 agagggtttc gttggtgtcc tggatgttac gcaggtagat gtgtttgtcg atttcggttt
     9421 tgaatccctg atactggatc catgctcgtt ccgcttgttc ttcgatggtt tcgaccactt
     9481 ccggcagtaa ccccagcagg ttgaagttac ggcgttcttc catgctgaag gcactgcctt
     9541 tattcaacaa cggaaattcc agcagtacag ggccagcgta agggatataa agcgaacgct
     9601 gtttttttgt ttttggttcc atgtcactca ctcttttttg aatatccatc cctggcacgc
     9661 ttttatcgtc tttgctttac cgccagggcg tcggccccaa gtataaagca gataaaaaca
     9721 aaaacaccat tgcgcaggca atggtgttta atcgtcattg aggactgatg gttatgaatt
     9781 acttttcagc ggggcgtttt ctgccggttg ggttatttac cacgctggat ttgtcacctt
     9841 cggtaactat tttgcgctgg ttagaaattt tatggtccag tccaagaata tgacgtgcct
     9901 gacggttcga tttcatttta actcctcaat cctgttgcta gttttaagga caacatcgcc
     9961 gtagcgaaga aacacgtgct aaacccctaa attaggttgc cgatcaagca tagcacctta
    10021 aagcgtaggg tgctggccac tgaccacata attgatcgtt tgctggtaga tatcactgag
    10081 gatgtcgtta tcagaagctt ccacccattt ggtcagctcc atgagaatgt catcttcagt
    10141 gacaacaccg tgctctgccc gaaggccttg ctcaatggca ttaaccagag cgggttctgc
    10201 tgttgaattt tctgcctgat aataagtaaa catagtgatt ctccgtgtct gtgtatttat
    10261 ggtgtttgct acggatcgca gatttataaa gcacattcag catggcaaat atttgccgct
    10321 ttgttgttaa gattagtcct tgttgatgat ttttatattt taacctcatg atattgatag
    10381 gtattattat tgtggtgagt tgattaatat taatgcaata tctcttgggt tatatattcc
    10441 cggttatcta ttgtggaaat ttaatttaag tgcagaagta atatttctgc cggattttta
    10501 ttcggaatat cctgcttatc ctcgtgctgt ttctcacgta gtctataatt tcctttttaa
    10561 gcccacatga gagcaacaat gacaatccat aagaaaggtc aggcacactg ggaaggcgat
    10621 atcaaacgcg ggaagggaac agtatccacc gagagtggcg tgctgaacca acagccgtat
    10681 ggatttaaca cgcgttttga aggcgaaaaa ggaactaacc ctgaagaact gattggcgca
    10741 gcgcatgccg catgtttctc aatggcgctt tcattcatgc tgggggaagc gggatttacg
    10801 ccaacatcga ttgataccat cgccgatgtg tcgctggata aagtggatgc cggttttgcg
    10861 attacgaaaa tcgcactgaa gagtgaagtt gcggtgccgg gtattgatgc ctctaccttt
    10921 gacggcatca tccagaaagc aaaagcagga tgcccggtct ctcaggtact gaaagcggaa
    10981 attacgctgg attaccagtt gaaatcgtaa agcattgccg gatgacgtgt caggcgcgtg
    11041 aatgcctgat gcgttgttag catctctaca gcgcccgcca gcaccggagc tcacgtccgt
    11101 cctcccttat tgctaatgat tgccggactt cacatccgct ggttgcaagg gggcaacgtt
    11161 cgtagaaaaa acagccttgc ggcaacgtgc ggtttcccgg cagatccgtt ttacgtaatg
    11221 cccattcttc ctccagcggt ttatcaatgg cggggaggga atccagcaat aatcgggtgt
    11281 atggatgtgc cggagccgtt agcacctgtt gcgcgtcgcc cagttctaca atctgcccga
    11341 gatacatcac cgccacccga tcgctcatat gacgtatcac cgagacattg tgtgaaatca
    11401 gcacataggt cagcccgtga ttttcctgta gcgttaccag taaattgagg atctgcgcct
    11461 gcacggagat atccagcgca gaggttggct catcaagcac aatcacgtca ggctgcgaag
    11521 agagtgctct ggcaatggcg atacgttgcc gctgcccgcc ggagaacgca tgaggcaggc
    11581 ggtcgagata ctccggacga atacccacct gcacagccag ctcctctacc aacgctcgcc
    11641 gctgttgttc actactacgc ttagctatcc agagcggttc tgtgatgatg cgccacaccg
    11701 gtaagcgcgg attgagcgaa gagagcgggt cctgaaacac catctgcata atgcgttgtg
    11761 agccagaacg gatgtactgc ccgtggctcg gttgcagcat acccattaaa agctgtgcga
    11821 gggtgctttt gccgcagcct gactcgccga cgatccctaa ggtttcacca cggcggatct
    11881 gtaaatcaat accattaatc gcatgaacat gttccgtagt tttaccaagc cagtttttac
    11941 gggccgggaa attgatatgg acgccgcgta acgttaataa cgtgtcagac acttatgacc
    12001 tcctgctgcg gataccaaca ggcgcagcgc tggttgttgt caccacacgc tgtcagcgcc
    12061 gggacgtttt cacactgtgc acctgccgca tagcaacgat cgcgaaaagc gcagccgtca
    12121 ggcaaatggg tgaggtttgg taccgtccct ggaatggcgg gtaatagctg gcgtggtact
    12181 ccatgttctg gtgcacattg gagcaaacca atggtatacg gatgccgggg atgatggata
    12241 acgtctgccc tcacgccgct ttcaattacg cttccggcat acatcacgta aacgctatcg
    12301 cacagttgcg acaccacggc catatcatgg ctgatgaaca gaaccgcagt tccactggcg
    12361 cgggctttat gtttaagcaa acgcagtacc tgcaactgca ccgtgacgtc cagcgccgta
    12421 gtcggttcgt cggcaataat caattgcggc tcgcaggaga atgccagcgc aatcattacc
    12481 cgctggcgca taccacctga aagctcaaac ggatagcgcg acataacttc cacggcatcc
    12541 gggatttgca tctcttccag caggacaatc gctttagctc tggcttcccg acgacttatt
    12601 ggttgatgat ggcggatcac gtccatcatc tgaagaccta ttcgacgtgt cggattgagg
    12661 gcggtcatcg gttcctgaaa gatcatcgcc actcgtgcgc cgcgccactg acgaagctgt
    12721 ttttcccgag cgttaagaac atcgtctccc agcagtgaaa tctgcccccg atgtacgcaa
    12781 taactgcccg tcggtagcag acgcataatc agcattgcgg tgactgattt acctgagccg
    12841 gattctccca ccagaccgac aatttcaccg cggttaatct gcaaggacac attgttgagc
    12901 gcgtgaacat caccgttaaa accggggaaa ctcaaatgca gctgttgaat gtccagaacg
    12961 ggctgggtca tgactgcttt cctcctgctt tcgggtcaag cagatcgcga ataccatcac
    13021 caaagagatt aaacccaacg gcggtaagca aaatcgctgc ccctggaaat gcgcaatacc
    13081 accactgatc gagtacatag ttgcgaccat tcgctaccat cgcgccccat tcagcactcg
    13141 gttgttgagc acccaggcca ataaatccca acgtggcggc cattaaaatc gcgctaccga
    13201 tatccagcga tgcctgcacg atcagcggcg gcagggagtt acgtaaaata tgccagctga
    13261 tcagatgcca acgcgacgca ccaaaggttt tcgccgcctg aacataggta tactggcgta
    13321 caactaatgc ttgcccccgc gccaggcgca cataaaaggg aattcgcaca atagcaatcg
    13381 ccagcatggc gttaaataaa ctcggcccga gagcggcagc cagtgccatt gtcagtacca
    13441 acgaaggaat cgacagcata atgtccatga tgcgcatgat gatggcgtct gcgcgtccgc
    13501 caagcacacc ggatagacat ccgagtagcg aaccaatcat acccgcaatg gcaaccacga
    13561 ctaatccggc gagaattgat tgctgactgc cgaccagtac gcggctgaac agatcgcgtc
    13621 ccacttcatc ggtgccaaac cagtgcgccg cagaaggcgg caaaaggcgg gcggttaaat
    13681 caatggcgtt gggatcatgc gtcgcaagcc acggtgaaaa aaacatcatc aatagcatta
    13741 atacaatgat gactgcgccg gtcacggtga gcggactgcc tttcagcatc catatcagtt
    13801 ttgcaccgtt aaatcgcgtt tgtttttgtg ggcgtacggc ggacgtttcc tcgcttagca
    13861 tcattcacca cctccacgtc cgatacgcgg atcaatccac aaatagagca aatccaccac
    13921 caggttgacc agcacataag caaatgaaac cacgacggca aagcccatca ctgccgggaa
    13981 gtcgagcgcc tgtattgatg ttactaccca tgcacccatt ccgggccagg caaaaacggt
    14041 ttcggtgagc actgcgccat acaacaaatc gcccagcgcc agacccaata cggtaatcga
    14101 tgggatcaac gcattgggta gcgcataaca taaaacgata taccagccgg gcaagccgct
    14161 ggcccgggcg gtacgaatgt agtcttcact caattgttcc agcatcgctg agcggatctg
    14221 gcgagcgaca attcccaggt gaacgaacgc cagcgttaat gccggtaaga tgagatgttg
    14281 caacgcattg aagaagactt caccgttgcc ttcaagcagc gcatcgagca gataaaagcc
    14341 ggtaacgtgc gttggtggat ccagccagtc atcaagcctt ccgccgccgg gaagaatttg
    14401 cagatgacca taaaacagca caatgacgcc cagtccaagc caaaacgcag gtgtggagat
    14461 tccggtaatg gccattattc gcaccagatg atccagccag cgatttcgcc agactgcaga
    14521 gagtatgccc agcgggatgc caatcaggag tgccagcagc agggcacaaa aagccagttc
    14581 cagcgtcgcc gggaaaaata tacgcaactc ttccaacacc ggacgcccgg tacgaatgga
    14641 tgttcccagg tcaccatgaa acaggtcgct gacgtagcgg taaaactgta catacagtgg
    14701 ctggtccagt cccagttgct ggcgaatatt ttccacgata gcatcgctgg cgcggtcacc
    14761 cgccagtaac cgcgccggat cgccagggat cagatgcgag ataataaacg taatcacgca
    14821 gacgcccgcc atcacgagca ccagccccca gcagcgttgg cgtaaaatac tccagaaggt
    14881 cacgttattt actcatggta ttgatattga agacctgttc cagcatggga ttgaacacaa
    14941 agcctttcac ctctttgttc atcgccagtt ggtagttttt ctggaacagg tacacataag
    15001 cagcgtcatc aatgacgatt ttctgtgcct gctggtagtc ccgggtacgc tgcgtctggt
    15061 cggtggtcgc aagcgcattg cgcagtaact tatcgacctc actgttttca tagaacgagc
    15121 ggttacccgg cagacctttt ttgtctgact caaaccagta attcataaac atatacgggt
    15181 cggcaaaatc cggactccag ttgccaatcg caatgtcgta atcaccttta cccactctgt
    15241 cgcgcatggt ggcgttcgcc agcttttcca gcttcacatt gatgcccagc ttgttgagac
    15301 tggattgtgt cgccagagca ataggctccc agttcggatc cttatcggag tagagaaacg
    15361 tcaggctggt gggtttgctc gtcactttat cccattcggc tttggctttc gtttcgtcat
    15421 ggttgtattg cattgccgtc gcatcgtagc cccacatgcc ttccggaatc gggccgcgca
    15481 tctgttttcc gttaccactc agaatgccgt taaccatgcc ctgataatcg gtagaccagg
    15541 aaatggcccg acgcagatcc gcctgattaa gaggcgcttt gctgttattc agatacaggt
    15601 aggtgacgcg cagtgacgga tactctgcca cattgacttt gttttcctgc ttcagggcgt
    15661 tgagttgatc caccggcagc gcatcggcaa tgtcaatatc accacgggag agctgcaggc
    15721 gacgggaggc actttcacca ataattttta ccgatactcg cttaaagttc ggtttattgc
    15781 cagggtaatg cggatttggc accagaacta attgctgacc tttttgccag cttttcagca
    15841 taaatggtcc ggaaccggcg gtattttgcg cgaggaagcc gcgggcatca tccgctgcat
    15901 gttcctttaa caccgccgga ttgataatgg atgcaccgtc attcgccagc gtgtagagga
    15961 acggtgcgaa tggctggcta agggtaaact tcaccgtatg ttcgtcggga gcatcaatct
    16021 ttaaatcttt gggaaatgct tctgctggcc cctggccgat ttttagtagc cgctcaaaag
    16081 agagttttac tgcttcggca gtgaccggtg tgccatcggc aaatttagca ttgtccttca
    16141 gggtgaacgt ccactctttt tgatcgtcag acgctttcca gctacttgcc agatcgcctt
    16201 caacgtcggt tgagccttta tcaccgtccg ttttgtactg aaccagccgc tgataagacg
    16261 ggtaggtcac cgtccagtcg ttattatcta ttgttaccgc cggggcgagg gtttgtggat
    16321 cggcggcctt accaatcacc agcatatctt tcggtacggc ggcgtgcgca accgggaaag
    16381 ttgtggcaag gacgagcgcg agcaatgtag gacgaaacgg tatcgatctc ttcatgacag
    16441 tttcctgatt aactgacgtg ctgtgtgcca ggggatataa aacaggtgaa ttgatcagcg
    16501 agcagtgggt aactcgctgc ctggggtaat tcgaagtgcc accattcgct ggagataccg
    16561 acaaaaccgc caccagtcat aatcgcattc agcaacagcc gattgcgctg agcggcgggc
    16621 gggacggaag ggtgataggc atgggagcgc tcgtgcattt catcgaaccc tgcgcccata
    16681 tcgaggatgt tcccgtgctc atcacgaagc gtcaggtcga tcgccgtgcc acggctgtga
    16741 ttagaaccga ccgtcacatc aacaacatat tgcgggtctg ggcaggcttg ccacaacatc
    16801 gcctgtgctt gttgtgggcg atacgcatcg taaatcacca gttgtaagcc tgacagctgg
    16861 gcgatactga tacttttcgc cagcgcggta atcgcatcct tgtgtagcag acaacgcgct
    16921 tgctgataaa tagctttacc tgtgatgtta tcagcgcagg cgtatttcaa ttcgatctcc
    16981 agatcaggga agattacggc taaatcaacc agttcggtgg tatccgacat aaacggttcc
    17041 tgtataagac aaaaattgct gcgctttccg cttatgcaga tctcatgcca tgccgggata
    17101 agcgccagaa tgctggctta aagttatatt ttttaacttt tgatcaacat ttgtgcagcg
    17161 tagtgcagtt ttggtgcaag aggggaagtt aaggaaggaa tctcccggaa tcgtagatga
    17221 aatcacagta tttaagtgac ggtgtcacgt taaatgaaaa cccgcgagtg cgggcgagag
    17281 gaatttgtca gattttcagc ggtaacacgc tgctcatcca gcctggaatt tcttcggcgg
    17341 gtagggggcg ggaaaagaaa tatccctgaa taacgcgaca gtggatcttg cgtagcatct
    17401 caaattgctc tttggtttcg acgccttccg ccacgacggt taaattgagg ctttgcccaa
    17461 tgctggtaat ggcttcaagt aaggcaagga tgcgtttttc ggtcagacaa cgatcgacaa
    17521 aacttttgtc aattttgatt tccgttaccg gaagactgac taagcgggat aatccggaaa
    17581 agcccgtacc aaaatcatct accgataagc ccacgcccat atcacgcagg atctgaatgc
    17641 gcttaaagat ttcggtatcg tgttccatca tcatgctttc cgtgatttct accgtcagct
    17701 ggtggccgtc aataccccag gcgtgcattg catcagacac ctgattaggc agttgattac
    17761 tgcgaaagtg cagtgccgac aagttaacgg aaagcgccgg gatatgaata ttctggctac
    17821 gccattctgc taactgacgg caagcttccg cgatgaccca gcgcccaata ttttcgattt
    17881 caccaatctc ttctgcgaga ggaataaacc gtgaaggggg cacatgacca tgctggggat
    17941 cgtgccagcg cgcaagggct tcgatgccgt acagttcacc cgtttctgcg aagatttgcg
    18001 gctggtaaac aagtttcagt tggttattgc taatcgcttc tttcagcgct gcgcctaaaa
    18061 ccaaacgctc ttttaccatt tcgttcatcg ccgggctgaa gaactgccag ccgttaccgc
    18121 cattcttgcg aatataatct attgcattgt gagcagtgga gagtaggtaa tcgtggtttt
    18181 tacccacgtc gtagctgatg ccaatactca aggtaagcgg gaatggttta tcgtcaatca
    18241 ttatcggctt gctgaccaca ttccgtagct catcggcgat ctgggtaatg ttactgacgt
    18301 cgttttccag gctcacgagg acaaactgcg taccttcgat acgacagaga tactgatccg
    18361 gtttgagttt tccacgaaag cgattgacca cttccagcaa tgcctgatcg gcccacgcat
    18421 agccaaggct atcaatcaca tcctgaatat ggtcaacacc gatgagatac accaccggag
    18481 agacggcttt gtcgaccagg tcatcgaggt aattgtgcag gttattgcga tttggcagac
    18541 cggtcatcgg atcaaattgg atgagttgtt caatatgctg gcggcttttt tcctgttcca
    18601 gcgccagcgc ggccatatgc tgactgatat ctgccacgcg ttcgataaag gcgctggttt
    18661 ctgctcctga cgaggtttta atttgcagga tccccgcagg cgcgccatca cgctgacgaa
    18721 tggtcgctga ccagctttgc gcattttgaa cttctgcacc gtgcgaagat gacgcccagt
    18781 gtatcggcat cccgttgcgc agtgcgaaca gcgaaacatg cgattcgttg agaacagatt
    18841 cgatgttacg acaaatgatt tcccccattt catgaaatgg cgggctgctg cacatggcgg
    18901 cgagaatatt gccttcaagc tggcggattt gccgttcttc ggtgatatcc gagaaagtca
    18961 ttaccaggtt ctgcagatgc gcgagcacgt cataaaccgg gctgatagag gctttaatcc
    19021 agattttttc accggtgcgc gtcaacagca gaaattcgtc ctgatcgcgg gcggttttcc
    19081 atagcaactg ttgtaaacga atgcggttat cggcagggaa ttcaggaatg ttcaggagtg
    19141 tatcgggctg cataccgctg gcttcgctaa tgcagtaacc aaacatttcg gtaaatgcgc
    19201 gattgcactg cacaatatgg cgttccggat cgaggacaat caccggtcgg tcgagatggt
    19261 caacggcaat aatcaattgt cgggtctgtt ctttttgcgc catttctacg ctggcatccc
    19321 gtaccagcgc caggtaataa actttcccct cggcgctcac tttcgatagc gcaaaacggg
    19381 tccagatttt actgccgtct tttttctcca gctgcagctc ccgactcatc ccctcgacgc
    19441 gcgctttacc accttcacgg ttatgacgaa tgtattcagg atgcgcagga cgcaaatccc
    19501 gcggaatcag catatcaatg ttattgccaa tgacttcttc acgtttgtac ccccagagct
    19561 tctctgcggc ggggttgaaa aacatcactt catcattttc gttaattaac accgcgccca
    19621 tcatattttg ttcaagggcg gggaaaaaaa tgccatcggc ggcattttcc gcatcggtta
    19681 gcttcatgat tacctctgca tcctggcgca tctaaagact ggctttccag agttcaacac
    19741 ggtttctacc tcgtcttttg gcgatataca gagcttcatc ggctatttga atgaggcgct
    19801 catagtcagg atgaccatta aacatggcgg caccgatgga aagtgagagg gcaatatcct
    19861 cgccgtttgc ggctttcagt ttggttttct ccacccgact gcgaatacgt tctgcggtac
    19921 gtaacgtttc gttttcagaa gcttcagtca aaacaatgat aaattcatcg cccccgtagc
    19981 gaaaaacata atcactactg cggacgttgt cataaaaggc ctgagagact ttacgcagaa
    20041 tttcatcgcc agtgttatgg ccccacgtat cgttgatctc tttgaattta tcaacgtcaa
    20101 taatcagcac tgacagcggt gtaccggtcc ggttggcatg ggcaatttcg cgtttgaaga
    20161 tagtcggcag gaagcggcgg ttaagtaatt tcgtcagtac atccataccg acttcgtggc
    20221 gcgatacttc ttcaaacaat tcacgcagca aggtaataat ttgcgataca gtatttctta
    20281 tctgtaataa aaatttcacc cgcagacttc tgttattcaa attcctggtg ttacgcatgg
    20341 tttgattgaa tataccgtcg aaatcctgaa tcagacggga gatatgccta cttcggcaat
    20401 gccactaaaa taatgtcgac ctttatggtt aaaccacagg ccaaaatcag cctggcttaa
    20461 aggcaaacta ctgcctaaat cagaatccag caggatttta tagataatat ctatttccca
    20521 tgaaagtatt gaggctattt gccgttcttt ttcttcttcg gcgttttcta gtaacgagaa
    20581 gatacgatag ttttcatctt cctttgaggc actactgtca ctaaaggtaa acgcgcgggt
    20641 catcacttcc atagcgatat caatactgtt aatcgagaaa tggtagacct gaagtttttc
    20701 tgcggcagaa taatccgaag agaagattac cggatagagg atttttttca gcacccgaaa
    20761 ccccatctcg acaatttcta ccggaattcc tatgcgggca tgcacttccg cgacggtatg
    20821 ctggatttgt attagccttt cgacatcgtc aacctgggca gaaagcacgt taataatcca
    20881 gcgttccatc gcacttttca actgccgctc aacttgttca ttactcaaga attcttcggc
    20941 atgcgggtcg atgcggacaa ttcgataaaa ctcgatactc agataatgag catgcgcaac
    21001 ggcaatttcc gcggctttag cacgaatgag tggatctgcc tgttcgacaa gtccggtcca
    21061 ctcatctttc attcttttaa aatacatctc cataattcac acccttataa ggctgggaaa
    21121 tcagacggaa tcaaaacgca acgtgcgaga tcgactaact gcaccatatt ctcctgaaat
    21181 atgaagatat actgaaaaga aataagcgac ttaggacagt ttcaatctac gctactgttc
    21241 ttcagaagag tatagcccat cgtaattatt tttcggtgac agcgaatatc gtatggtttt
    21301 tcatattcat acatttttat tagggattta tagctgttta actaagtgtg gttaattgcg
    21361 tggttaattt gacttatgta agcatgatta ctagtgggat atttcacaag gtgtaacaag
    21421 ccggtgggta aagcaccggc ttgttacaaa gtaagcatgg gagtttaact gccccaacga
    21481 ctttgcagat agctgaccgc ttgttgagtc tgcggtttat tcagatagtc ctcacggaac
    21541 aagatggtgc cgctaatttc tggtaccgca tcgttaagat cgagctgctt tttcagttcc
    21601 ggtacgccgc cgttaatcat ccagtctggc tctatctttg aaggttcacc cactttatag
    21661 aaggcgatac cgatatacag gcgggtcctg gtcggtttaa cgacatccgc ccaccatttt
    21721 gccaacacgt cataacgcgc ggcactccgt gagaacggcc agtaaatttg gggagcaatg
    21781 taatccagca atccttgttc cacccatcga cgggtgtcag cgtaggattc gtcataggct
    21841 gccgcgcctc gggtatcgga accgagcgga tcgtgtgatc ggttacgcca cacgcctgcc
    21901 gggctaacgc caaattcgac tcccggctta atgcttttaa tggtgtgcga tacttttgta
    21961 attaactgct gagtattgtt gcgccgccag tctgcttttg acgcaaatgc gcctccgtat
    22021 ttacggtacg tttcgttatc atttagccgt gaacccggtg actccgtata gaaatagtcg
    22081 tcaaactgca cgccatctac cggatagcgg gaaaccactt cggcgactat tgatgtgatc
    22141 cagtcctgaa cctcagggat gcccgggtcg aggacaaagc gatcgccaga cgttctgatc
    22201 cagtcacggt gttgcacata gacgctcgcc ggttgttgag acagagtgct attcagttcc
    22261 ctgatagtac cgggcttcgt attaaccgat acgcgatagg ggttaaacca ggcgtgtact
    22321 ttcatcccac gcttgtgggc ttcgtcgagc ataaattgca gcggatcgta acccggattt
    22381 tcaccaatct taccggtcat aagatcggac cacggcaaaa tttttgatgg ccacagggcg
    22441 gtaccgtccg gcttgacctg gaaaaagacc gtgtttatac cgagacgttg cagatgatcc
    22501 agtttgtcga tcatcgcctg ttgttgtaca cgggcccggc tggtggggtt actaatgtta
    22561 accgaggaaa ccggtggcca gtcgaggcga gacaccgtgg ccagccagat gccacgcatc
    22621 ggttgtgacg attgttgcgt cgtggctggt ggctttgaac ctgctggtgg tgtcaccatg
    22681 gactctggag gcgtgctttt acaactacac agtaaaagtg ccagtgcaac cagtatcgct
    22741 ggtcttctaa tcgttaattt cttgtttcgg gagcagatat ccatatgtgc tggtttccgg
    22801 taaacagatg tgcgctcatt ctcgtactta tcccggttaa gtcaatacga cagcaagcac
    22861 gaaaaaggga gcgatgaatt atcgctccct tgtcttataa ccattcagac atggttagtg
    22921 tttcttgtca ttcatcacaa tatagtgtgg tgaacgtgca cgcgggtgca ggaagaagtg
    22981 accttttggt gcgttctgac tgttgattgg ctccagagtg acgccggtat tcgctttgcc
    23041 tttacgatca tgaacagcat agagaataaa gggcagggca agtaccacca ggaaactaac
    23101 gaccagtaat tcaacataca tatcggtaga gtcaccctgg atgttatccg gcggcaggaa
    23161 ggaaacaata aacgccataa ttgaagtcag cagaccgaca attgccacga ccagtttcac
    23221 ccctttacca ccagggatat taaatgtgcg ttttaagtca ggatgtttaa gaaccaacac
    23281 aatgtagcca ataaacagca tgaaataagc acacagataa atcaccaccg tcagcgccag
    23341 tgcgatcagg aaggacatgt tgttaccgcc accggtattg gtgaggatga tcaacgcgat
    23401 agaagtaatc accagctgcg aaatgaccag cgttaccggt acgccatttt tgttcatttt
    23461 agcgaatgcc gctggcagca ggtttttctg cgctgtgaca tacatcccgc gagaaggacc
    23521 aacaatccag gaggcgattt ccgccagaac acccagcaac agcagtgcgg agatcacgcg
    23581 aaccgtccac tcaatttccg gtgccacatg ggacatcaga acggtaaagg tttgcattac
    23641 ccctgcggag aggttgattt cattacccgg aatgaccatc gcaatagata aaccgccaac
    23701 agagcttaag cagattgccg ccaccatcag cagtaacata gccagtggat agtcgcgccc
    23761 ggggttgctc atttcattga cgtgagttgc ggaagcttct acgcccatat aactcaaaat
    23821 gaaggcaaca aatacaacca gtgtgcccac tttagagaag tcagggaaga aggtcttcga
    23881 atccatttcg atagcaacgg gggcaccgga gtgcagataa atagccgcta atgcgatcaa
    23941 aataaatgca ggtaacagga taccggcgaa gaagccaact ttagcaattc gcgccgtgta
    24001 tttcgtgcca ccaaactgcg ttaatgccag cgcccaaaga atgatgagtg ctgcaatagt
    24061 tttggtaatg gggtcttcat tcagcgctgg ccatttcagg atgtaggaga gtgcccctaa
    24121 cacgaaatag agcatcggaa taaaaccaat ggcgatttgc agatagccaa atgagatcgc
    24181 tgcaaatccc catctcggcc ccagagtatt tgatacccag gcgaagacac caccttcttc
    24241 ccagccgtcg acggtggcca tttccgcagc acaaagtccc acgggaataa accataaaat
    24301 cccgcctaat agcaggaaga agactaatga aaagcccgat gttgcgaagg tagggtattc
    24361 ataaacagcc attaccatcg atgccgttat ggcaaagaat ccgagtaatg tgagctgctt
    24421 agctttacct gtctgtactg atgtagccat attatccccc taaaacggta ttcctgtcgg
    24481 aaccgcacct gttttgttct gaagcgtatt cagaacaata ttttccgttg ctaatgccag
    24541 tgaacagact ttggaaattg tcccgaaacg ggttcgtttc gggacaccgt taccgttaaa
    24601 cgttatcagg tatgtttaaa gctgttctgc tgggcaatac cctgcagttt cgggtgatcg
    24661 ctgagatatt tcagggaggc tttgtagtct tccagcaaca gttcagcaaa gtccatttcg
    24721 aagccgcgac gacacataat
//
LOCUS       DAJVUK010000049        24359 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.049, whole genome shotgun sequence.
ACCESSION   DAJVUK010000049 DAJVUK010000000
VERSION     DAJVUK010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24359
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.049"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(82..2301)
                     /locus_tag="OQQ57_001841"
     CDS             complement(82..2301)
                     /locus_tag="OQQ57_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HCS1956631.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
     gene            complement(2412..3824)
                     /gene="ftsP"
                     /locus_tag="OQQ57_001842"
     CDS             complement(2412..3824)
                     /gene="ftsP"
                     /locus_tag="OQQ57_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HCS1956632.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASNSRRYQLQMSDSRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
                     PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            complement(3899..4636)
                     /gene="plsC"
                     /locus_tag="OQQ57_001843"
                     /gene_synonym="parF"
     CDS             complement(3899..4636)
                     /gene="plsC"
                     /locus_tag="OQQ57_001843"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HCS1956633.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKIAELDKEVAEREAAGKV"
     gene            complement(4869..7127)
                     /gene="parC"
                     /locus_tag="OQQ57_001844"
     CDS             complement(4869..7127)
                     /gene="parC"
                     /locus_tag="OQQ57_001844"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HCS1956634.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LVSERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
                     EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            complement(7673..8155)
                     /locus_tag="OQQ57_001845"
     CDS             complement(7673..8155)
                     /locus_tag="OQQ57_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HCS1956635.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
                     "
     gene            complement(8208..8600)
                     /gene="ygiW"
                     /locus_tag="OQQ57_001846"
     CDS             complement(8208..8600)
                     /gene="ygiW"
                     /locus_tag="OQQ57_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HCS1956636.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSRRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            8752..9411
                     /gene="qseB"
                     /locus_tag="OQQ57_001847"
     CDS             8752..9411
                     /gene="qseB"
                     /locus_tag="OQQ57_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HCS1956637.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLASEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            9408..10757
                     /gene="qseC"
                     /locus_tag="OQQ57_001848"
     CDS             9408..10757
                     /gene="qseC"
                     /locus_tag="OQQ57_001848"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HCS1956638.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDS
                     DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNVQGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPSGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW"
     gene            10867..11448
                     /gene="mdaB"
                     /locus_tag="OQQ57_001849"
     CDS             10867..11448
                     /gene="mdaB"
                     /locus_tag="OQQ57_001849"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HCS1956639.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
                     EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
     gene            11479..11793
                     /locus_tag="OQQ57_001850"
     CDS             11479..11793
                     /locus_tag="OQQ57_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HCS1956640.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(11841..13733)
                     /gene="parE"
                     /locus_tag="OQQ57_001851"
     CDS             complement(11841..13733)
                     /gene="parE"
                     /locus_tag="OQQ57_001851"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HCS1956641.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQIYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(13762..14343)
                     /gene="yqiA"
                     /locus_tag="OQQ57_001852"
     CDS             complement(13762..14343)
                     /gene="yqiA"
                     /locus_tag="OQQ57_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HCS1956642.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            complement(14343..15170)
                     /gene="cpdA"
                     /locus_tag="OQQ57_001853"
     CDS             complement(14343..15170)
                     /gene="cpdA"
                     /locus_tag="OQQ57_001853"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HCS1956643.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            complement(15195..15617)
                     /locus_tag="OQQ57_001854"
     CDS             complement(15195..15617)
                     /locus_tag="OQQ57_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HCS1956644.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTTVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            complement(15618..16247)
                     /gene="nudF"
                     /locus_tag="OQQ57_001855"
     CDS             complement(15618..16247)
                     /gene="nudF"
                     /locus_tag="OQQ57_001855"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HCS1956645.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHSLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
     gene            16452..17933
                     /gene="tolC"
                     /locus_tag="OQQ57_001856"
     CDS             16452..17933
                     /gene="tolC"
                     /locus_tag="OQQ57_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HCS1956646.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSIVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            18081..18752
                     /locus_tag="OQQ57_001857"
     CDS             18081..18752
                     /locus_tag="OQQ57_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HCS1956647.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLASCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            18758..19918
                     /locus_tag="OQQ57_001858"
     CDS             18758..19918
                     /locus_tag="OQQ57_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HCS1956648.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLPLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
     gene            complement(19956..20744)
                     /gene="ygiD"
                     /locus_tag="OQQ57_001859"
     CDS             complement(19956..20744)
                     /gene="ygiD"
                     /locus_tag="OQQ57_001859"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HCS1956649.1"
                     /translation="MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVV
                     VSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLVELLAPVPVT
                     LDKEARGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIML
                     VASGNVVHNLRTVKWHGDSSPYPWAMSFNEYVKANLTWQGAVEQHPLVNYLDHEGGAL
                     SNPTPEHYLPLLYVLGAWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            20887..21648
                     /gene="zupT"
                     /locus_tag="OQQ57_001860"
     CDS             20887..21648
                     /gene="zupT"
                     /locus_tag="OQQ57_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HCS1956650.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGISPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAVAGIMVALSVDELMP
                     LAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            complement(21706..21876)
                     /locus_tag="OQQ57_001861"
     CDS             complement(21706..21876)
                     /locus_tag="OQQ57_001861"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956651.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
     gene            complement(22136..22789)
                     /gene="ribB"
                     /locus_tag="OQQ57_001862"
     CDS             complement(22136..22789)
                     /gene="ribB"
                     /locus_tag="OQQ57_001862"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HCS1956652.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     regulatory      complement(22893..23041)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            23163..23453
                     /gene="ubiK"
                     /locus_tag="OQQ57_001863"
     CDS             23163..23453
                     /gene="ubiK"
                     /locus_tag="OQQ57_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HCS1956653.1"
                     /translation="MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRL
                     DLVSREEFDVQTQVLLRTREKLALLEQRMSELENRSTEIKKQPDPETLPPTL"
     gene            23737..24288
                     /locus_tag="OQQ57_001864"
     CDS             23737..24288
                     /locus_tag="OQQ57_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein"
                     /protein_id="HCS1956654.1"
                     /translation="MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIK
                     PGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTM
                     TGQTDLLKNTKETEIGGATGVGVRILNSQSGEVTLGTPVVITFNNTNSYQELNFKVRM
                     ESPGKDATPGNVYAQADYKIAYE"
BASE COUNT         6023 a         6495 c         6091 g         5750 t
ORIGIN      
        1 tcggcatata aataaatgcc taatgagata gattctgatg taatatcccc ggtagcaatt
       61 ctgctaccgg gaacagcgaa tttaacgtcc aaccgccgct ttaggccgtt tcttcgcacc
      121 agcattcacc ggacgagatt gcgtagacga cgcttttttt gccgtagcag gcgtctgacg
      181 ctgggtcgcc atcggcgtat gtttcgtcaa cgccggacgg gtattgcggt tctggcgacg
      241 agcttcacgc atctcttcaa tggttggcgc aggcactaag caatcgcgac ggctaccaat
      301 cagatgcttt ttacccatcg cttccagcgc ctggcggatt aacggccagt ttgccggatc
      361 gtggtaacgc aacaacgctt tatgcaaacg acgctgcttg tcgcccttcg gtacgaagac
      421 gtcttcactc ttataaccaa tcttcgccag cggttttttc ccggtgtaat acatggtggt
      481 tgagttcgcc agcggcgatg ggtagaagtt ctgtacctgg tcgagacgga aacgatgctt
      541 tttcagccac agcgccagat tcaccatatc ttcatcacgc gtaccggggt gcgcggagat
      601 gaaatagggg atcagatact gctctttacc tgcctgtttt gagtaagtat cgaacagctc
      661 tttaaagcgg tcatagctgc ccatgcccgg cttcatcatc ttcgataacg gcccttcttc
      721 ggtatgttcc ggggcaatct tcagataacc gccgacgtga tgggtcgcca gttctttgat
      781 atagcgcgga tcttccacgg cgatgtcata acgcacacca gaggcaatca ggatcttttt
      841 aatgcctttc agatcacgcg cacggcgata gaggttgatc gttggttcgt ggttcgtgtc
      901 catgtgcgga caaatatccg gataaacgca cgacaaacgg cggcaggttt gctcagcgcg
      961 tggcgatttg cagcgcaaca tatacatgtt ggcagttggc ccaccgagat cggaaattac
     1021 gcccgtaaaa cctggaacgg tgtcgcggat cgcttcgatc tcattaatga tcgaatcttc
     1081 ggaacggctc tgaataatgc gcccttcgtg ctcggtgata gaacagaaag agcagccgcc
     1141 aaagcagcca cgcataatgt tgaccgaaaa acggatcatt tcgtaagccg gaatacggac
     1201 attgccatag gccggatgta gcacgcgctt gtatggcagc gcaaaaacgc tgtccatctc
     1261 ttcggtagaa agcggaatag caggcgggtt gatccacaca tagcggtcgc cgtgtttttg
     1321 catcaatgcg cgggcacagc ctgggttggt ttcgtggtgc agaatacgcg aagcatgggc
     1381 gtacagcact ttatcgccct tcactttctc gaaagaaggc agcaacacgt aggttttttc
     1441 ccacggtttc gggcgcggtg gctgcacggt tacggctttg gcttcctgct ttttcggtgc
     1501 caccggtttg ttatccgcgc acggcaaatc ttcaccatac ggatgcggga ttgggtcgat
     1561 ttttccaggg gtatcaagac gggtggaatc cacgccgctc cagccaggca gggcctcttt
     1621 cacgataatc gcggtattac gcacatcgcg gatttcacta atcggctcgc ccatcgccag
     1681 acggtgcgcc acctccacca gcggacgctc accgttacca aacatcagca tgtcggcttt
     1741 cgaatccacc agcacggaac ggcgcacggt atcggaccag taatcataat gtgcggtacg
     1801 acgcagacta gcctcaatac cgccgaggat caccggtaca tctttccacg cctctttaca
     1861 acgctgggta taaaccagtg tggcgcgatc cgggcgctta cccgcgacgt tatccggcgt
     1921 gtaggcatcg tcatgacgta aacggcgatc ggcggtataa cggttgatca tcgaatccat
     1981 gttgccagca gtaacaccga aaaacagatt cggtttaccc agacgcataa agtcgtcttt
     2041 gctgctccag tccggctggg cgatgatccc gacgcgaaag ccctgcgctt ccagcatacg
     2101 accgcaaatc gccatcccga agcttgggtg atcgacatac gcgtcgccag taaccaaaat
     2161 gatgtcgcag ctatcccagc caagttgatc catctcttca ctagacatcg gcaaaaacgg
     2221 tgccggtcca aaacaggcgg cccagtactg cggccaggag aacaggtcgc gatccggttg
     2281 gatcagggag atagagctca ttttgcttcc agaaatgata aaaaaataat caaaggccgg
     2341 ggattataag ccggaacgaa agagaaatcg aaaagtattc catactcgcc ctcctcgggc
     2401 gagtatgaag attacggtac cggattgact aacagttgcc caatcgagcc acggtccgcc
     2461 atttccagcg tctgactgtt gaagtagaac gggaagtgcg cccaggaagg ctgaccgaaa
     2521 taaacaagca gctccacttg tccgtcaacc caaacggtat ctttccagcc tctgtcttcc
     2581 gggaacggca tcgcaccatt cacgttacgg atctggaaca tcacgccttc aatatggaac
     2641 gcttgcggct cgtccgcgcg taccgtccag cgttcccacg ttccttgctg cgcggtgaca
     2701 tcaatacggt tgacgtccca cagttgtcca ttaatacccg ggtcatcacc cagactgata
     2761 tcgcgactgc gaatcggcga accggccatg atttcagttg gcagcaagcg catcggaaga
     2821 ctgtctgtga ccagcggcag aaggccggtt gggcgcagcg ttagcaccag ggtagaaacc
     2881 agaatgctgg atggctcaaa gaagccacga atacgatcaa caatgctcgc cgcttcgcca
     2941 caggtgatcg acacttcatc accgttgctc atatccacca gaatctcgcg gcgctcgccc
     3001 ggtgccaacg aaagttgctt caccgataca ggagcaggca ggaatccctg atcgccagaa
     3061 atcacatgta acgggcgact atcgctcatc tgtagttgat agcgacgaga gttcgacgcg
     3121 ttcagcagtc gcaagcgcac ccagccacgc gagacttcaa cgtacgggct ttgtacaccg
     3181 ttaaccagca gcgtatcacc aacaaagccg ccgcttcccg gttcgttgta ttctggcgta
     3241 ccaaagttat ccagccgttt atcctggata atgaccggaa aatcatccac accataatgg
     3301 ttggggatag gcagcgactt gctgacttca tcttccacca gccacattcc ggcaaggccg
     3361 ttatagacct gctgagccgt gcggttggga gtattggcgt gataccacag agtagctgcg
     3421 ttctggcgaa tgggcagtac gggtgcccag tcagcgtttg gcgacatcat ccgtgccgga
     3481 ccgcccatca gcgggcctgg tacctgtagc ccggccaccg tcattgagac attttctgtc
     3541 aggcggttgc tgtaaataag cttaacatcg tcgcccttcc agacgcggat agtcggcccc
     3601 aggtaacgac cattgattcc ccagaccgac gcgcgtgtcc ctggcgtaaa tgaccagtgc
     3661 gcacgttgta cagtcataaa cagcggttgc ccacggcgag attcaagtag cggcggaacg
     3721 ggtagcggtt gctgttgccc ggctgcgctg gccttcaggg gaacagcgcc ggcacaaagt
     3781 gcaatccccg atgcctgaat gaactgacgc cgactgagtg acatatttgc tccatgtaaa
     3841 actggctaaa gtaataccgt gcaggaaagt gttccccgca aaaatacaga ttgccgactt
     3901 aaacttttcc ggcggcttcg cgttctgcga cttctttatc gagctcggcg attttttgtt
     3961 ccattatcga acgacaatgg gcagccagct cacgaacctg atctttgcca tactgactga
     4021 cgtcaattgg cggcagcatt tcgacaatca ccagaccgtt gtgcagtcga ttaagattaa
     4081 tcttattcga agttgtagag acgcacacgg gaataatcgg gacgcccgcc gcaattgccg
     4141 cgtgaaatgc tccagtcttg aacggtagca ggccgcgacc acggctgcgg gttccttccg
     4201 ggaacatcca gatggaaata cggcgttttt tgaaatgatt cacgacttcc gcaatggtgc
     4261 cgtgagcttt agtgcgattg tttctgtcga tcaataagtt gccggttaac cagtacaact
     4321 gcccgaagaa ggggatccac agcaagctct ttttacctac cgtcaccgtc ggcggttgca
     4381 caatgttcga tgctgtcacc atgtcatagt tgttctggtg gttagcgata tagatagcat
     4441 tgccgtagct ttcagcatct gcaggtttgc ggcactcaac tttcaggccg aacagcggcg
     4501 caagacggcc aaacatatgc ccaaaggtgg ccacatgttt cgggttacgc gggctgaaaa
     4561 ggcagtaaat ggagccgaat acacagacta agatgctgta aatcacggta ataataagac
     4621 gaaagatata tagcataaca acctctgaag gtctgagaga ctggcattgt acgtcacctg
     4681 aaatcaggtt agggcattgt taaaagccgc tctctggaaa agcgtattgt taatcgcaac
     4741 gcatgaataa acaacggttt caagggaatt tttatcgttt ccgggggttg aatacgctgc
     4801 cggatgacga cttaacgttt catccggcgt tccttgcaag cgggaggaaa caggccctcc
     4861 ccggcatatt actcttcgct atcaccgctg ctggcacggc gaggagagtc gatctcaaca
     4921 cgatcgatac gctgcaaacc gcgcatcaac gtaccgcggc gtccacgttc gccagtgact
     4981 ttctgtaact cttccgggcg cagtttaatt ttgcgtttcc caacatgaat ggtcagcgtg
     5041 ctttgcggcg gcagaacgta caattgcgcc agaccatctt ctccacgcgc ggcttctgcc
     5101 gatggaatgt tgataatctt gttgcctttg cccttcgaca gctgcggcag atcgcttacc
     5161 gggaacatca acatacggcc tgcctgagtg attgccagca gcatatcgga agcatcttca
     5221 atcaccaccg gcggcataac atgggcattt tccggtaagg tgatcaaagc cttacctgca
     5281 cggttacgcg ccaccagatc gttaaaggtg cagacgaaac cgtaacccgc atcggaagcc
     5341 atcagcagtt tctgatcgtc gctttccatc agcatatggt caacggtcgc cccaggcggc
     5401 aacgttaatt tgccggtgag tggttcgccc tgaccacgcg ccgacggcag cgtaatcggg
     5461 tcgatggcat agctacgacc ggtggaatca acaaacacta ccggttggtt gctcttacct
     5521 ttcaccgccg ctttgaagct atcacccgct ttataattca ggcccggcgc gtcgatatca
     5581 tggcctttag cgctgcgtac ccagcccatc tgcgacagca caatggtgac aggttcagac
     5641 ggcagcatgt cgtgctcgct catcgctttc gcttcttcgc gttcctgcaa cggcgaacga
     5701 cgatcgtcac cgtaggcttg cgcgtctgcc tgcagttctt tcttcagcag gttattcatt
     5761 ttacgctcgg aaaccaaaat gccctgcaac tggtcgcgct ctttttccag ctcactctgc
     5821 tcaccgcgaa tcttcatctc ttccagtttg gcaagatgac gcagtttcag ttcgaggatc
     5881 gcttccgcct gggtttccgt aaggccaaac cgcgacatca gcgccggttt cggttcatct
     5941 tcgttacgaa tgatctcaat cacttcgtcg atgttgagaa acgccaccag caaaccttcc
     6001 aggatatgca ggcgcttgag gactttctcc agacgatagt tcagtcggcg gcgcacggta
     6061 tcgcgacgga acaccagcca ttcggagagg atttccagca ggtttttcac cgccggacga
     6121 ccatccagac cgatcatatt gaggttaatg cgatagctct tttccagatc ggtggtagcg
     6181 aagaggtggt tcatcacctg atccatatcc acgcggttgg aacgcggcac aatcaccaga
     6241 cgggtcgggt tctcgtggtc agattcatcg cgcagatcgt caaccatcgg cagctttttg
     6301 ttgcgcattt gcgcagcaat ttgctccagt acgcgcgcac ctgaaacctg atgcggcaat
     6361 gcgctgataa ccaccgcgcc atcttctttc ttccacaccg cgcgcatacg cactgaacca
     6421 cgtccgttct cgtagatttt acggatctcg gcgcgcgaag tgataatttc cgcttcagtc
     6481 ggataatccg gcccctgcac gatatccagc agctgatcga gcgtggtttt cggctggtcg
     6541 attaatgcga ttgccgcctg agctacttca cgcaggttat gcggtggaat atcggtcgcc
     6601 atgccgacgg caataccggt ggtgccgtta agcaaaatgt ttggcagacg ggcaggcagc
     6661 attttcggct cctgcaaagt gccgtcgaag tttggcaccc agtcagccgt cccctgcccc
     6721 agctcgctca atagcagctc ggaatatttc gacaaccggg attcggtgta acgcattgcc
     6781 gcgaacgatt tcggatcgtc cggcgcgccc cagttcccct gaccatcaac cagcggataa
     6841 cggtaagaga acggctgcgc catcaggacc atcgcttcat aacaggcgct atcgccgtgc
     6901 ggatggtatt tacccagtac gtcaccgacg gtacgggccg attttttaaa tttggcgctg
     6961 gcattcaggc ccagttcaga catcgcatac acaatgcggc gctgaacagg tttaagacca
     7021 tcgccaataa acggcaacgc acggtccatg atcacgtaca tggagtagtt taagtaggcg
     7081 ttttccgtaa attcatgtag cgcaaggcgc tctgccatat cgctcattaa ttctgattcc
     7141 tcaacttatt cgccagcctt caaaggggca atattgccgg agatactaca ttatctgccg
     7201 cgtcgagtca caggagatca gcgtgaatag cgccgccgga cgtgctccga cggcgataaa
     7261 ggcatcaatg tgccttgata tacaactctt tgctgtagac ttgatcggca tagagggcag
     7321 cacaaggttg cgcccatgcc acaccactcg gcatgggggt ccgctccggg cgattcgaga
     7381 agttgaggtt atgcgagtcc agggaagcct aaagcatcaa agtagtcgac tgtaagtata
     7441 cggttcagcc cagtttagct gtgtctccac cagtgccccg cgcctcctgc cataagtgcg
     7501 gcttgctcat ggataccccc gagacggctt acggcgcacc ggataataaa tttcgcgtat
     7561 acatggtatt ccttaccgga gaaattataa gcccaacaac aatacgcctg tggcattgtt
     7621 cgctcaaact tatcgcgagt gatttggctc acactccggt aaagattccc catcacgcta
     7681 acggcacata aacatccgtt tccagtcgct gttctgtcat accttcggca agattggtgt
     7741 agtgaaacag aatcggtgct ttacgcattt tctcgccgct tgcaggcagc cagtggcgaa
     7801 tgatgcccca taccgtgtgt gaaatatcgt ccagctcgcc aacgtggcgg gccacggcat
     7861 aacgtccacc ggtaagttca ccattgctca caccataacg attatcggga atcggttcgc
     7921 taacgctgcc gcagatatca aagcgaaacg ctttcggtgc ggtggtggca gggtcgtccc
     7981 aggcgacgcc aaaagtctgg ctttggttaa caggagaaag ccccgtctct ttacgccaca
     8041 tgataaattt cgccacactg tagttgagca actcagggct acagcggtgc ggcaacatcg
     8101 ccacagggat tgatgggaaa tcgataatgt ttacatccag tgtcaggttt gtcattttgc
     8161 ctccctgcga aattattccc gggaacgcgt cccgggagcg gtaacaatta cggatttact
     8221 ttgcggatct gtttgacgtc aatttcaaca gaattccagt ctttatcgac ttccccctga
     8281 atctcaaccg tatctttcgg cgtcaccgtc acaccgttcc agcgtttgtg gtcgatatca
     8341 acattgatag taccgctggc atctttaaac acgtagagat cgtcagagat gcgttcaacg
     8401 atattgccgc gcagggttac ccaggtgtcg tcacgccggg attttgcgct ttctacagtc
     8461 gttacgctgc cgttcggccc ctggaatcct ccggcctgac tttgcgttgc cgatgggcca
     8521 gaaaaaccgc cctgctctgc tgccatcacc ggtgcactgc acagggccat tactgcgatt
     8581 actgctgcga attttttcat gtttattact ccctttaatg tctgtttccg agcatttaac
     8641 aagatagtcc ttaacaactt cttaagggaa aaaaataaaa tttaatgctg tacagagcgc
     8701 gttacaacac ggtttactgg cagcaaatac ggttatcgca gggatgaaaa aatgcgaatt
     8761 ttactgatag aagatgacat gctgattggc gacggcatca aaactggcct tagtaaaatg
     8821 ggttttagtg tcgactggtt tacacaaggt cgtcagggaa aagaggcgct ttatagcgca
     8881 ccttatgatg cggtgatcct ggatttaacc ttaccaggca tggatggtcg cgatattttg
     8941 cgcgaatggc gagagaaagg tcagcgtgag ccggtactga tcctgaccgc gcgtgatgcg
     9001 ttagcggaac gtgtagaagg gctgcgtctg ggagctgacg attatctgtg taaacctttt
     9061 gcgttgatag aagtcgccgc caggctggag gctctgatgc gccgaaccaa cggccaggcc
     9121 agcaacgagc tgcgccacgg taacgtcatg ctcgaccccg gcaaacgtat cgccacgctg
     9181 gctagcgaac ccttaacact gaaaccaaaa gaatttgccc tgctggaatt actgatgcgt
     9241 aacgctggtc gggtactgcc gcgcaaactg attgaagaga aactgtatac ctgggacgaa
     9301 gaggtcacca gtaatgccgt tgaagtgcat gtgcatcatc tgcgacgcaa actcggtagt
     9361 gattttattc gtaccgtgca tggtattggc tacacattag gtgagaaatg aaatttaccc
     9421 aacgtcttag tctgcgcgtc aggctgacgc taatcttttt aattctggcc tcggtgacct
     9481 ggctgctttc cagctttgtc gcctggaaac aaacaacgga taacgtcgat gaattgttcg
     9541 acacccaact gatgctgttt gccaagcggt taagtacgct cgatctcaac gaaatcaacg
     9601 cggcggatcg catggcacag acgccaaata aattaaaaca cggtcatgtt gatgacgatg
     9661 cgctgacctt tgccatcttt acccacgacg gcagaatggt ccttaatgat agcgataacg
     9721 gagaagatat tccctatagc tatcaacggg aaggttttgc tgacgggcaa ctggtcggtg
     9781 aagacgatcc ttggcgtttt gtctggatga cctcacctga tggcaaatat cgcatcgttg
     9841 ttggccagga atgggaatac cgtgaagaca tggcgctggc gattgttgcc gggcaattga
     9901 tcccgtggct ggtcgcactg ccgattatgt taatcatcat gatggtacta ctgggtcgtg
     9961 aactcgcgcc gctgaacaaa ctggcgctgg cactacgtat gcgtgaccct gactcggaaa
    10021 aaccactaaa cgcgactggc gtacccagcg aagtgcgacc actggttgag tcgctaaatc
    10081 aactgttcgc ccgcacacat gcgatgatgg ttcgagaacg acgctttacc tccgatgcag
    10141 ctcacgaact acgtagcccg ttaacagcgc tgaaagtgca aaccgaagtt gcgcagctct
    10201 ctgacgatga tccgcaggca cggaaaaaag cactgctcca attacattcc gggatcgatc
    10261 gcgctactcg tctggttgat caactgctca cgctatcgcg gctggactca ctggataacc
    10321 ttcaggacgt cgcggagatc ccgcttgaag atctcctgca atcgtcggtg atggatattt
    10381 accacacggc gcagcaggcg aaaattgacg tgcgactgac actcaatgtc cagggcatca
    10441 aacgcaccgg acaaccgcta ttgctaagtt tgttggtgcg aaatttgctg gataacgccg
    10501 tgcgttacag tccacagggc agcgtggtgg acgtcacgct gaatgccgat aatttcatcg
    10561 tgagggataa cggccccggt gtgacaccag aggcactggc gcgaattggc gaacgcttct
    10621 atcgcccctc cggacaaacc gctaccggca gtggacttgg gctatcgatt gtccagcgaa
    10681 tcgccaagct gcatggcatg aatgttgagt ttgggaatgc ggaacaaggt ggatttgagg
    10741 cgaaagtaag ctggtaaggg taagactttt gctaaattcg caaaagactt tgcacatttt
    10801 gctaatttca ccgtaccgct ctgtgacgta ctatagtcgg caaacgtctc accttgaggt
    10861 taaaaaatga gcaacattct gattatcaac ggcgcgaaaa aattcgccca ctccaatggt
    10921 caactgaatg acaccctgac cgaagtcgcg gatggcacac tgcgcgacct cgggcatgat
    10981 gttcgcatcg ttcgcgccga cagcgactac gatgtcaaag cggaagtaca aaactttctc
    11041 tgggctgatg tggtgatctg gcagatgcca ggctggtgga tgggcgcgcc gtggacagtg
    11101 aaaaaataca ttgatgatgt attcaccgaa ggtcacggga cgctgtatgc cagcgatggc
    11161 cgtacccgca aagatccgtc aaaaaaatac ggttccggcg gcctggtaca gggcaaaaaa
    11221 tatatgcttt ctctgacctg gaacgcacca atggaagcct tcaccgaaaa agatcaattc
    11281 ttccacggcg ttggcgtcga cggtgtgtat ctgccgttcc ataaagcaaa ccaattcctt
    11341 ggcatggaac cgctgccgac atttatcgct aatgacgtga taaaaatgcc tgatgttccc
    11401 cgctatactg aagaatatcg caagcatctt gtggaaattt ttggttaact agagctcagg
    11461 ctttagaagg agttaaccat gcttaccgta atcgcagaaa tccgtactcg tcctggtcaa
    11521 catcaccgtc aggcggtatt ggatcagttt gctaaaatcg ttccaaccgt actgaaagaa
    11581 gaaggttgcc acggctatgc gccaatggtg gattgcgctg ctggcgtgag tttccagtct
    11641 atggcaccgg attctatcgt gatgattgag cagtgggaaa gcatcgcgca ccttgaagcg
    11701 catctgcaaa ccccgcacat gaaggcgtac agcgaagccg taaaaggtga cgtgctggag
    11761 atgaatattc gtattctgca gccagggatt taatcctgcc ttgtttgccc ggccatcctg
    11821 accgggcaat gttctttcct ttaaacctca atctccgcca tgtcgccttt ctcttgcaac
    11881 cagttgcggc gatcttccga gcgtttcttc gccagtagca tgtccatcat cgcgtcagta
    11941 cgctgatcgt cttcatcatc gatagtcaac tgcaccagac ggcgagtgtt cggatcaagc
    12001 gtggtttcgc gcaattgcat cgggttcatt tcccccagac ctttaaaacg ctggacgttc
    12061 ggcttgcctt tcttgcgttt taattgctca agtacgccct ctttctcttc ttccgtcagc
    12121 gcgtaataaa cctctttccc gagatcaata cggtagagcg gtggcagtgc gacgtaaacg
    12181 tgaccgtgtt tcaccaacgc gcggaagtgt tttacaaaca aagcgcagag cagcgtggca
    12241 atgtgcagac catcggagtc agcatccgcc aggatacaga tcttgccgta acgaagctgg
    12301 ctcaaatcgt cgctgtcagg atcgataccg atcgctaccg aaatatcgtg cacttcctgc
    12361 gaagccagca cttcgtcgga agagacttcc caggtgttaa ggatcttacc tttcagtggc
    12421 atgatcgcct gatattcgcg atcgcgcgcc tgcttggcag atccgcctgc ggagtcacct
    12481 tccacaagaa acagttcggt gcggttaagg tcctgcgcgg tacagtcagc cagtttgcca
    12541 ggcagcgccg gaccgctggt cagcttttta cgcaccactt ttttagccgc acgcatacga
    12601 cgctgggcgc tggaaatcgc catctctgcc agcaactccg ccgcctgaac gttctggttc
    12661 agccacagga taaaggcatc tttcaccacg ccagaaacga atgccgcgca ctgacgcgaa
    12721 gagagacgct ctttggtctg cccggcaaac tgcggatcct gcatttttac tgacagcaca
    12781 taggcgcagc gatcccagat atcttccgcc gacagcttta caccgcgcgg cagaatgttg
    12841 cggtattcac agaactcacg catcgcgtcc agcaggccct gacgcagacc attaacatgg
    12901 gtaccgccct gcatcgttgg gatcaggttg acgtagcttt cggtcagcag ttcaccgcct
    12961 tccggcagcc acagtagcgc ccagtccacc gcttcagtat cgccagcgaa attaccgata
    13021 aacggttttt ctggcagcgt cggtaaaccg tttaccgctt ccgccaggta atcattcaga
    13081 ccgtcctgat agcaccagcg ctgttcggtg ttgttgatct catctttaaa ggtaatctca
    13141 acgccggggc acagtactgc tttggctttc agcacatgcg tcaggcgtga aacagaaaaa
    13201 cgcgggctat cgaagaaggt ttcatccggc cagaaatgga cgctggttcc ggtattgcgt
    13261 ttaccgcaag tgccgacaac ctgtaaatcc tgcacctttt cgccattttc aaaggcgatg
    13321 ttataaatct gaccatcgcg gcgcacgtta acttctacgc gcttcgacag ggcgttaacc
    13381 accgaaatcc ccacgccatg caggccgcca gagaactggt aatttttgtt agagaattta
    13441 ccgcctgcat gcagacggca aagaatcagt tcaaccgccg gtacaccctc ttccgggtga
    13501 atatccaccg gcatcccgcg cccatcgtca ataacttcta acgactggtc agcatgtaaa
    13561 ataacgtcca cgcgttttgc gtgacccgcc agtgcttcat ccacactgtt atcaatgact
    13621 tcttgcccca aatggttagg gcgagtggta tcggtataca tccccggacg gcggcgaacc
    13681 ggctcaagcc cggtgagtac ctcaatggca tcagcgttat aagtttgcgt catggtttaa
    13741 gttagtaatt cgagttgatc gtcagagatg gtgcagacca agaaaatcga cgatcgggtt
    13801 gaaataatct tcgaagcccg tgaatgcgtg gttgccgcct tctatgacag tctggcggca
    13861 ggaagcgtag tacgccaccg cctggcggta atccagcact tcatctcccg tctgttgcag
    13921 cagccagatc aaatccggcg cttccagcgg gtcaatctgc atgactttaa gatcgtaaat
    13981 atggcgtgac tctagcacat attgctgccc ggtgtagggg ttctcgttct gaccgagata
    14041 gtccgtcagc agttcaaacg ggcgcaccgc cgggtttacc accactgcgg gcagcataaa
    14101 acattgtgac aaccaggtgg cgtaatatcc ccccagtgac gaaccgacaa tacccagcga
    14161 atcgccgcca tgttccagga caatggattc cagcagctct gccgcgtcgg aaggatacgg
    14221 cggcaactgc ggaatgatca tctcaacgtc agggtgatgt tccgccagcc agttttttaa
    14281 caagctcgct tttgcagagc gcggcgagct gttgaaaccg tgtaaataaa gaagcgtaga
    14341 catcagtagc cttctgaagc ggtatcaggt tggaaacgtg tgtccgccag gcgatgcacc
    14401 tcggtggtca gcgtgccatc agcatgtaac tcgagagtac gccagccggg cgcgatggta
    14461 tccagcgtaa agttggaaca gtgcggctta aactgcacac aggtcgacgg cgttgccagc
    14521 aggcggcgac cgttccagtc gagatccagc tcctgatgaa tatgaccgca cagcaagtat
    14581 ttgacgtgcg gaaacttcgc cagcacggta tccagttcgc ccgcgttacg cagactgtgt
    14641 tgatcgagcc aactacaacc cgcaggtagc ggatgatgat gcagcagcag caacgtatgg
    14701 cgttctggcg catcggccag tttacgttcc agccactcaa gctgaaactc gctcagctca
    14761 ccgtgcggca cgccaaacac ctggctatcc agcaacagga tttgccattg ctcaccaata
    14821 aacacgcgct tcgccgggga gatacccgca tcctgtaacg cgctgtacat cgcgggctgg
    14881 aaatcgtggt tgcccggcag ccagacgcag ggcgcacgaa aacttgcgat gccttcagcg
    14941 aaatgctgat aggccgcaga ggattgatcc tgcgctaaat cacctgtcgc gacaatcagg
    15001 tcgaattcgt gctgatgtgg acgaatcgcc tccagcaccg cctggtagct ttcccaggtg
    15061 tttaccccta acagggcttc gtgcttttgt gcaaacaggt gagtatcggt aatttgtaaa
    15121 atcctgactc tggcctcacc agccagagga agggttaaca ggctttccaa atggtgtcct
    15181 taggtttcac gacgctagta aaccggaatc gccatcgctc catgtgctaa acagtatcgc
    15241 aaccagtccg ctaaaaactg gttaatttga tgcttttcgt cgcgttgatg caacttttta
    15301 ttaggataat cataccgcgc tttgaagcga aaaatctgct ggcttgaaca cacttcagcc
    15361 accatcgcgt catgatacag acgcaccgtc attgacggaa ggctccagta actgatcgcg
    15421 ggcgcagtct gttctattgt caccaaggta gtgtatcggg tcgattccac agtcgtcagc
    15481 cgatattgtg cgtttgccac ctgatagctt acagtttcgc cgggtgcgtc attgcgcggt
    15541 aacaaacggc gcaattgtga aaagttcatc tcgcacaggc gcatcatttc aggaaagtca
    15601 ggtgtgtaac gcttcattta tgcccactca ttttttaacg cttggtggtg cagctgcagc
    15661 cattgcaaag cgatgaccga cgctgcgttg tcgattttcc cctcttctac ccactggtat
    15721 gcctgttccc ggcttaccac atgaacgcga atatcttcgt tttcatcagc cagaccatga
    15781 ataccgcttg cggtcgtggc gtccacttcg cccaccataa ttgacgaacg ctcactggtg
    15841 ccccccgggc ttgccaggaa acttaacacc ggtttggtcc gtttgactat cagccccgcc
    15901 tcttcaatcg cttcgcgacg ggcaacatct tccacacttt caccctcttc aatcatcccg
    15961 gcaaccatct ccagtagcca gggggtttcg ctagtgtcgt acgcggcaat tcgaatctgc
    16021 tcaatcagca caacttcatc acgcactggg tcaaagggta gcaagactgc ggcgtgaccg
    16081 cgctcaaaaa tttcccgccg cacctcatga ctcatttgcc cgttgaatag actatgacga
    16141 aatctataaa gatctaatga aaaaaagccg cgataaagtg tttctcgtgc aataatttct
    16201 acatcgtttt tgccaaatgt aacgggcagg ttgtctggct taagcattgt taatgtcctg
    16261 gcactaatag tgaattaaat gtgaatttca gcgacgtttg actgccgttt gagcagtcat
    16321 gtgttaaatt gaggcacatt aacgccctat ggcacgtaac gccaaccttt tgcggtagcg
    16381 gcttctgcta gaatccgcaa taattttaca gtttgatcgc gctaaatact gcttcaccac
    16441 aaggaatgca aatgaagaaa ttgctcccca ttcttatcgg cctgagcctt tctgggttca
    16501 gttcgttgag ccaggccgag aacctgatgc aagtttatca gcaagcacgc cttagtaacc
    16561 cggaattgcg taagtctgcc gccgatcgtg atgctgcctt tgaaaaaatt aatgaagcgc
    16621 gcagtccatt actgccacag ctaggtttag gtgcagatta cacctatagc aacggctacc
    16681 gcgacgcgaa cggcatcaac tcgaacgcga ccagtgcgtc cctgcagtta actcaatcca
    16741 tttttgatat gtcgaaatgg cgtgcgttaa cgctgcagga aaaagcagca gggattcagg
    16801 acgtcacata tcagaccgat cagcaaacct tgatcctcaa caccgcgacc gcttatttca
    16861 acgtgttgaa tgctattgac gttctttcct atacacaggc acaaaaagaa gcgatctacc
    16921 gtcaattaga tcaaaccacc caacgtttta acgtgggcct ggtagcgatc accgacgtgc
    16981 agaacgcccg cgcgcagtac gataccgtgc tggcgaacga agtgaccgca cgtaataacc
    17041 ttgataacgc ggtagagcag ctgcgccaga tcaccggtaa ctactatccg gaactggcgg
    17101 cgctgaatgt cgaaaacttt aaaaccgaca aaccacagcc ggttaacgcg ctgctgaaag
    17161 aagccgaaaa acgcaacctg tcgctgttac aggcacgctt gagccaggac ctggcgcgcg
    17221 agcaaattcg ccaggcgcag gatggtcact taccgacgct ggatttaacg gcttctaccg
    17281 ggatttctga cacctcttat agcggttcga aaactcgtgg tgccgctggt acccagtatg
    17341 acgacagcaa tatgggccag aacaaagtgg gcctgagctt ctcgctgccg atttatcagg
    17401 gcggaatggt taactcgcag gtgaaacagg cccagtacaa ctttgttggt gccagcgagc
    17461 aactggaaag cgcgcatcgt agcatcgtgc aaaccgtacg ttcctccttc aacaacatta
    17521 atgcatctat cagtagcatt aacgcctaca aacaagccgt agtttccgct caaagctcat
    17581 tagacgcgat ggaagcgggc tactcggtcg gtacgcgtac cattgttgat gtgttggatg
    17641 caaccaccac gctgtacaac gctaagcaag agctggcaaa tgcgcgttat aactacctga
    17701 ttaatcagct gaatattaag tcagccctgg gtacgttgaa cgagcaggat ctgctggcac
    17761 tgaacaatgc gctgagcaaa ccggtttcca ctaatccgga aaacgttgcc ccgcaaacgc
    17821 cggaacagaa tgctattgct gatggttatg cgcctgatag cccggcaccc gtcgttcagc
    17881 aaacatccgc acgcactacc accagtaacg gtcataaccc tttccgtaac tgatgacgac
    17941 gacggggctt cggccccgtc tgaacgtaag acaacgtaaa gatacgggtt atctgccgca
    18001 ttcttccccc ttctcgcttc aatttcgacc agccatcctc tattctgatg ggtatttacc
    18061 actggtcccg gaagacaaaa atgaaacgga caaaatccat acgccacgca tcgttccgca
    18121 aaaactggag cgcacgccat ctgacaccag tcgctctcgc ggttgccact gtttttatgc
    18181 tggctagctg tgaaaagagt gatgaaacag tgtctctcta tcaaaatgct gacgactgtt
    18241 cagctgcaaa cccaggcaaa agcgccgaat gtaccaccgc gtacaacaat gcgctgaaag
    18301 aagccgaacg tactgcgccg aaatacgcca cccgtgaaga ctgtgttgct gaatttggtg
    18361 aaggtcagtg ccagcaggca ccagcccagg ctggcatggc accagaaaac caggcgcagg
    18421 cccagcaatc cagcgggagt ttctggatgc cgctgatggc cggttacatg atggggcgtc
    18481 tgatgggcgg cggcgcggga tttgcacagc agccgctgtt ctcctcgaaa aacccagcca
    18541 gcccggctta cggtaaatat accgacgcga cgggtaaaaa ctatggcgca gcccagccag
    18601 gccgcaccat gaccgtaccg aagacagcca tggcaccaaa accggcgacc actactaccg
    18661 ttacccgtgg cggttttggt gaatctgttg ccaaacaaag cactatgcag cgtagcgcaa
    18721 ccggcacctc ttctcgttca atgggtggct gataccgatg gaaagagtca gtattaccga
    18781 gcgcccggac tggcgtgaaa aagcccacga atacggtttc aattttcaca ccatgtacgg
    18841 cgagccgtac tggtgtgaag atgcttacta caagttgccc ctcgcccagg ttgaaaagct
    18901 ggaagaagtc accgccgaac tgcaccagat gtgcctgaaa gtggtggaaa aagtgatcgc
    18961 cagcgatgag ctgatgacca aattccgcat tccaaaacac acctggagtt ttgtgcgtca
    19021 gtcatggctg actcaccagc catcgcttta ttcgcgtctt gatctggcat gggatggcac
    19081 tggcgaacct aaactgctgg aaaataacgc cgatacacca acgtcactat acgaggcggc
    19141 gttctttcag tggatctggc tggaagatca gcttaacgcc ggtaacttgc cggagggcag
    19201 cgaccagttt aacagtctgc aagaaaagct aatcgatcgc tttgtcgagt tgcgtgaaca
    19261 gtatggcttc cagttgctgc atctcacctg ctgtcgcgac acggtggaag atcgcggaac
    19321 cattcagtat ttgcaggact gcgcgacgga agctgaaatc gctaccgagt tcctctacat
    19381 tgacgatatc gggttaggtg aaaaaggtca gttcacggat ttacaggatc aggtaatttc
    19441 caacctgttc aagctgtatc catgggaatt tatgttgcgt gagatgttct ccaccaagct
    19501 ggaggatgca ggcgtacgct ggctggaacc ggcgtggaag agcattatct ccaacaaagc
    19561 gcttctaccg ctactgtggg agatgttccc gaatcacccg aacctgctgc ccgcttattt
    19621 tgcggaagat gatcatccgc aaatggaaaa atatgtggtt aaaccgatct tctcccgtga
    19681 aggcgcaaac gtgtcgatca ttgagaacgg caaaaccatt gaagcagcgg aaggtccgta
    19741 tggcgaagaa gggatgattg ttcagcaatt ccatccgtta ccgaaattcg gcgacagcta
    19801 tatgctgatt ggtagctggc tggtgaacga tcaacccgcc ggaattggca ttcgtgaaga
    19861 ccgtgcattg atcacccagg atatgtctcg gttttatcca catatttttg ttgagtaatc
    19921 aatgatgccg gatggcattc gccatccggt aattgttaac ctatctgcac cgacagcata
    19981 ctcaggctgc ccatttctat accatcgacc ggaatggtaa ttggctcctg cccatcccac
    20041 gcacctaaga catacaacaa cggcagatag tgctccggcg ttgggttcga taacgcgcca
    20101 ccttcatggt cgaggtaatt caccagagga tgctgctcta ccgccccttg ccacgtcaga
    20161 ttcgctttca catactcatt aaacgacatc gcccaaggat atggtgaact atcaccgtgc
    20221 cacttcactg tacgcaggtt atgcaccacg ttgccactgg cgaccaacat tattccttca
    20281 tctcgcagcg ctgccagttt gcgccccatt tcgaaatgcc aggcggcagg tttgctactg
    20341 tcgatactca actgcaccat cgggatatcg gcgtcaggat acatcttaat cagcacgccc
    20401 caggaaccgt ggtcaaagcc cctggcttct ttatccagcg tcaccgggac cggcgctaac
    20461 agctcaacca gatgctgtgc cagcacaggc gaacccggag caggataatg cgtatcgtac
    20521 agcgcctgcg ggaagccacc aaagtcatga atcgtgggcg gcgtctccat cgcggtcact
    20581 cctgttccac gggtaaacca gtgagccgaa accaccacaa tcgcttgcgg gcgtggcaat
    20641 gtcatcccca acttctgcca gctgcgggta tacaaattat cttccagcac gttcatcgga
    20701 ctaccgtgac ctaaaaacaa tgctggcata cgtgttgaag acatgatgat atccttaact
    20761 aagggtgtca ttttgatatc ctcacaatac gcttgttcgg cggagtaaga acccggataa
    20821 caatgatgat gatcatcagt tattttgacg atctgcctga aggtgaagat ttataaggag
    20881 ttgtcgatgt cagtacctct cattctgacc atactggcgg gggcagccac gtttattggc
    20941 gcgtttctcg gcgttctcgg acaaaaaccc tcgaaccgct tactggcgtt ttcgctaggt
    21001 tttgcggcgg ggatcatgtt gctcatctca ttaatggaaa tgcttcctgc cgcactagca
    21061 gctgaaggaa tatcgcctgt gttgggttat ggaatgttta tcttcggtct gcttggctac
    21121 tttggcctgg accgcatgtt gccgcatgcg catccgcagg atttaatgca aaaatcggtg
    21181 cagccgttgc caaaatcgat caagcgcaca gccattctgc tcactctcgg catcagtctg
    21241 cataacttcc cggaagggat tgccaccttt gtcacggcga gcagcaacct ggagctggga
    21301 tttggcatcg cactggccgt cgcgttgcac aatatccctg aaggtctggc agtggcaggc
    21361 ccggtttatg cggcaacggg gtctaaacgc accgcgattc tgtgggcggg gatttctgga
    21421 ctagcagaaa ttcttggtgg tgtgctggcg tggttaatcc tcggtagcat gatttccccg
    21481 gtggtcatgg cggcggttgc aggaattatg gtggcgctct cggttgatga attaatgccg
    21541 ctcgccaaag agattgaccc taataataac cccagctatg gcgtactatg tggaatgtca
    21601 gtgatgggat tcagtttagt gctgctacaa acggcgggaa ttggttaaaa acaacatcag
    21661 aagttgtcca gcacatggac aacttctgcc agcttcacga aagccttatt ctaccttttc
    21721 ggctgtctct tctctcgtac tgtttaagta tttgttccgc gcttcaagca gtgcgtctct
    21781 gtcctggcga aacgcccgac aataacgttt caaatgcagg aaataaccca ccacaaccag
    21841 agcaatcaat acaatccagt accaggcgat aaacatcctt tacccttaat atttaacaat
    21901 actaaacatt tagcgcataa atttcacata tcctttttcg gatatattca tatggtcgca
    21961 taataacgga acaattatat gattttgatc ataatgaaaa agaatgcctg atattaatga
    22021 aattttctca tagaaagaga agcggaatta acatcttgca tagcagggca aaataaaaac
    22081 cgaagccagc tacaacttcg gtttcttgat taaggcagta attaagcagc ggttttcagc
    22141 tggctttacg ctcatgtgcc tgacggtatg ccaccaggtc ttcaatagtc acgagcgcca
    22201 tattgtgttt attggcaaac tcaatgcact ctggtgcacg cgccatcgtg ccatcgtcat
    22261 tagtcagctc acacagcaca ccagccggtt taaagcctgc cagcgtcatc aaatcaatag
    22321 tcgcttcagt atgaccgcca cgcgtcagta caccacctgc ctgcgcgcga agtgggaaaa
    22381 cgtggcccgg gcgattcaga tcagaaggtt ttgcgccatc ggcaatcgct gcgcgaacgg
    22441 tcgtaatacg atcagcggca gaaacaccgg tagtcacacc ttcagccgct tcaatggtca
    22501 cggtaaaacc ggtgccatag gcgctggtgt tattttctac catcattggc agatcaagtt
    22561 gtttacggcg atcttcagtg atgcacaggc aaacaatacc gctaccgtgg cgaatggtca
    22621 gcgccatctg ctcaacggtc atggtttctg ccgggaagat catatcgcct tcgttttcac
    22681 ggtcttcatc atcaagcacc attacaccgc gtccttcacg cagcgcagcc agtgcatttt
    22741 caacacgttc gaaaggcgta ccaaaagagg aaagtagcgt ctgattcatg gtaaaaaaaa
    22801 ctcactaaaa ttatggttac cagaatcagg gcagtcttag gagtggcggc atatagccaa
    22861 aataacgtga gcgggtccat gcccgacaga atcgttactc tctcccatcc ggactctaac
    22921 cgtcggcccc ggaattacac cggatctgct gtcctttgag ttcgcaccca aagcgctcgc
    22981 gggctttcaa ctgagttgat ttaccgccgg tggggaattt cgccccgccc tgagaataag
    23041 cggattcact ataacgctaa tgattagcgg cagcaacgca tagcttcaca taattctggt
    23101 ttatgactta cccttatcgc actacaatgg tactcaacac ctatcagtac agggaaacta
    23161 caatgattga cccgaaaaaa attgagcaaa tcgctcgcca agttcacgaa tcaatgccta
    23221 aaggaatcag ggagttcggg gaagatgtgg agaaaaaaat ccgccaaacc ctacaagctc
    23281 agctgacgcg cctcgacctt gtaagccgtg aagagttcga cgtccaaacg caagtcctgt
    23341 tacggactcg tgagaaactg gcgctgcttg aacaaagaat gagcgaactg gaaaatcgca
    23401 gtactgagat taaaaagcag ccagatccag agactctccc cccaacgctg taaacatttg
    23461 tctttaatgc actgtaaatt atgaattaat cttctaattt acagtgcttt ctattacctt
    23521 atcgcttaat tccattcaga atatcaccac aaaaatgaat gagtgcaatt gaaaatatta
    23581 ttgttatgta tttttttaag ttttacttaa tccatattta gataaactaa tttcataaaa
    23641 cccgaaaagt aaaatataat atttgaatga ttagcaatcc ttaaataaca gttactaatc
    23701 attcattttc tacttatatt tatataaagg aatattatgt ctgcttttaa aaagtcactt
    23761 cttgttgctg gcgtagcaat gattctttcc aataacgtat ttgctgacga aggtcacggc
    23821 attgttaaat ttaaaggtga agttatctct gctccatgtt caattaaacc aggtgacgaa
    23881 gacttaactg taaatctggg tgaagtagca gataccgttc tgaaaagcga ccagaaatct
    23941 ttggctgagc ctttcactat tcacctgcaa gactgcatgt tgagccaggg tggaaccact
    24001 tattcaaaag cgaaggttac tttcaccaca gcgaatacta tgacgggtca gactgacctg
    24061 ctgaaaaaca ccaaagaaac tgaaatcggt ggtgccacag gcgttggcgt acgtattctg
    24121 aatagccaga gcggcgaagt gactttaggt actccggtag taattacatt caacaatact
    24181 aacagctatc aggaactgaa cttcaaagtt cgtatggaat ccccgggcaa agatgctacc
    24241 ccgggcaacg tttacgctca ggctgactat aagattgctt acgagtaatc acattaggcc
    24301 gggttcgccc ggccacatca ttaacggatt aatgataagt ggaacagatg tataaaaaa
//
LOCUS       DAJVUK010000050        24036 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.050, whole genome shotgun sequence.
ACCESSION   DAJVUK010000050 DAJVUK010000000
VERSION     DAJVUK010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24036
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.050"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            324..551
                     /gene="feoA"
                     /locus_tag="OQQ57_001865"
     CDS             324..551
                     /gene="feoA"
                     /locus_tag="OQQ57_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HCS1956655.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
     gene            568..2889
                     /gene="feoB"
                     /locus_tag="OQQ57_001866"
     CDS             568..2889
                     /gene="feoB"
                     /locus_tag="OQQ57_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HCS1956656.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
                     KDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
     gene            2889..3125
                     /gene="feoC"
                     /locus_tag="OQQ57_001867"
     CDS             2889..3125
                     /gene="feoC"
                     /locus_tag="OQQ57_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HCS1956657.1"
                     /translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            3328..4206
                     /gene="rpnA"
                     /locus_tag="OQQ57_001868"
     CDS             3328..4206
                     /gene="rpnA"
                     /locus_tag="OQQ57_001868"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HCS1956658.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMGCLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDI
                     MRFTGVSEEELAAASQ"
     gene            complement(4235..5005)
                     /gene="bioH"
                     /locus_tag="OQQ57_001869"
     CDS             complement(4235..5005)
                     /gene="bioH"
                     /locus_tag="OQQ57_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HCS1956659.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSQGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDDWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVPMPFLRLYGYLDGLVPRKVVPML
                     DKLWPRSKSYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            5043..5726
                     /gene="gntX"
                     /locus_tag="OQQ57_001870"
     CDS             5043..5726
                     /gene="gntX"
                     /locus_tag="OQQ57_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HCS1956660.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRAARTDKTLCPQCGLPA
                     THSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCRWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            5785..6360
                     /gene="nfuA"
                     /locus_tag="OQQ57_001871"
     CDS             5785..6360
                     /gene="nfuA"
                     /locus_tag="OQQ57_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HCS1956661.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            6721..8037
                     /gene="gntT"
                     /locus_tag="OQQ57_001872"
     CDS             6721..8037
                     /gene="gntT"
                     /locus_tag="OQQ57_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCS1956662.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(8082..10166)
                     /gene="malQ"
                     /locus_tag="OQQ57_001873"
     CDS             complement(8082..10166)
                     /gene="malQ"
                     /locus_tag="OQQ57_001873"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HCS1956663.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKD
                     LDRRRRAAAKKQ"
     gene            complement(10176..12569)
                     /gene="malP"
                     /locus_tag="OQQ57_001874"
     CDS             complement(10176..12569)
                     /gene="malP"
                     /locus_tag="OQQ57_001874"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HCS1956664.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQEVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATIGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPALAALLDKLLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLQDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            13181..15886
                     /gene="malT"
                     /locus_tag="OQQ57_001875"
     CDS             13181..15886
                     /gene="malT"
                     /locus_tag="OQQ57_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HCS1956665.1"
                     /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYG
                     KTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIATVQQATNGHCAICETMAQKRQY
                     ASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSR
                     NLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGW
                     ATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAI
                     LRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQW
                     ELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSL
                     LEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREGTMHAE
                     FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL
                     ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL
                     PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD
                     LDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA
                     NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
                     AGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRI
                     LREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQI
                     AGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYGV"
     gene            complement(15929..16945)
                     /gene="rtcA"
                     /locus_tag="OQQ57_001876"
     CDS             complement(15929..16945)
                     /gene="rtcA"
                     /locus_tag="OQQ57_001876"
                     /EC_number="6.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HCS1956666.1"
                     /translation="MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAK
                     PGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGAVRGGEYRFAIGSAGSCTLVL
                     QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
                     PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSL
                     HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
                     PAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFGLIEIDGVTR
                     VSIE"
     gene            complement(16949..18175)
                     /gene="rtcB"
                     /locus_tag="OQQ57_001877"
     CDS             complement(16949..18175)
                     /gene="rtcB"
                     /locus_tag="OQQ57_001877"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-splicing ligase RtcB"
                     /protein_id="HCS1956667.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
                     VMPDVHLGKDSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIKICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
                     LAYFMEGTEYFDDYLKAVAWAQLFASLNRDVMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMTAQSD
                     LVEVIYTLRQVVCVKG"
     gene            18364..19962
                     /gene="rtcR"
                     /locus_tag="OQQ57_001878"
     CDS             18364..19962
                     /gene="rtcR"
                     /locus_tag="OQQ57_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator RtcR"
                     /protein_id="HCS1956668.1"
                     /translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWHPTLCLCQQESLVIDRL
                     ELLHDARSCSLFETLKRDIASVSPETEVVSIEIELHNPWDFEEVYACLHDFARGYKFQ
                     PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQTSPPRKKEQPRGAGEVTIIDLD
                     LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
                     AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
                     LLRSANGGMLFFDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
                     RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
                     ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
                     RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSATGRQLFDVSRQGKASVNDA
                     DRLRKYLARFGLTWEAVQDQHSSS"
     gene            complement(19944..20702)
                     /locus_tag="OQQ57_001879"
     CDS             complement(19944..20702)
                     /locus_tag="OQQ57_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HCS1956669.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(20719..21549)
                     /gene="glpG"
                     /locus_tag="OQQ57_001880"
     CDS             complement(20719..21549)
                     /gene="glpG"
                     /locus_tag="OQQ57_001880"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HCS1956670.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIIAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(21594..21920)
                     /gene="glpE"
                     /locus_tag="OQQ57_001881"
     CDS             complement(21594..21920)
                     /gene="glpE"
                     /locus_tag="OQQ57_001881"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HCS1956671.1"
                     /translation="MDLFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            22110..23615
                     /gene="glpD"
                     /locus_tag="OQQ57_001882"
     CDS             22110..23615
                     /gene="glpD"
                     /locus_tag="OQQ57_001882"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HCS1956672.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAE
                     LKYLVDHEWVRRTDDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
     gene            complement(23667..>24036)
                     /locus_tag="OQQ57_001883"
     CDS             complement(23667..>24036)
                     /locus_tag="OQQ57_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956673.1"
                     /translation="FSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYISPEKSALLE
                     NIRNFFLTFVWPPLNFSPFWPQPWTDFVGPISAQLGFALGYYCHWCRKNRNQRKKWGD
                     WVTCLSLAILAQGPLFNYLQ"
BASE COUNT         5649 a         6543 c         6076 g         5768 t
ORIGIN      
        1 accaaactca taatatattc cggcaatatt tatcacttca ttaacaactg aaaccttaat
       61 taaacattag ccagtccggg taattcacta ttcgaattat attttcgctg cgatataacc
      121 ttgagccaca tcaacattga gtcagattat tattcaaacc aacattcgca cacattttaa
      181 gtattgctga tagaaaccat tctcattatc attgtgttat tgattattta atctctcctt
      241 tgttggcaaa tcatctggtc tcatgtcgct gtcaaacgcc ccatgaggta gttatccagt
      301 taatgagaaa caagtaggca cctatgcaat acactccaga tactgcgtgg aaaatcactg
      361 gcttttcccg tgaaatcagc ccggcatatc gccaaaaact gctttctctt ggcatgttac
      421 ctggctcctc ttttaatgtg gtgcgcgtcg ctccactcgg cgaccccatt catatcgaaa
      481 cccgtcgtgt gagcctggta ttacgcaaaa aagatctggc cttattagaa gtggaagcgg
      541 tttcctgtta atacggtgat aacaacaatg aaaaaattaa ccataggctt aattggtaat
      601 ccaaattctg gcaagacaac cttatttaac cagctcactg gcgcacgtca gcgtgtaggt
      661 aactgggctg gcgttaccgt cgaacgtaaa gaagggcaat tctccaccac cgatcatcag
      721 gtcacgctgg tggacctacc cggcacctat tctctgacca ccatctcatc gcagacctcg
      781 ctcgatgagc aaatcgcctg tcactacatt ttgagtggcg acgccgacct gctgattaac
      841 gtggtggatg cgtctaacct tgagcgtaac ctgtacctga cgctacaact gctggaactc
      901 ggcattccct gcattgtggc actgaacatg ctcgacattg ccgagaagca aaatattcgt
      961 attgaaattg atgctctgtc ggcgcgtctg ggctgtccgg tgatcccgct ggtttcaacc
     1021 cgtggtcgcg gtattgaagc gctcaagctg gcgattgatc gctataaagc taacgagaat
     1081 gtggaactgg tgcattacgc acagccgctg ctcaacgaag cagattcact ggcaaaagtg
     1141 atgccttccg acatcccgct gaaacaacgt cgctggctgg gcctgcaaat gctggaaggc
     1201 gatatctaca gccgcgccta cgccggtgaa gcgtcgcagc atctggatgc cgccctcgcc
     1261 cgtctgcgta atgagatgga cgatccggcg ctgcacattg ccgatgcgcg ttaccagtgc
     1321 attgctgcca tctgtgatgt ggtaagcaac accctgacgg cagaacccag ccgtttcacc
     1381 actgcggtag ataaaatcgt gctcaaccgt ttcctcggtc tgccgatttt cctctttgtg
     1441 atgtacctga tgttcctgct ggctatcaac atcggcgggg cgttacagcc gctgtttgac
     1501 gtcggctccg tggcgctatt tgtgcatggt attcaatgga ttggctacac gctccacttc
     1561 ccggactggc tgactatctt cctcgcccag ggcctgggtg gcggcattaa caccgtgctg
     1621 ccactggtgc cgcagattgg catgatgtac ctgttcctct ccttccttga ggactccggg
     1681 tatatggcgc gtgcggcgtt tgtgatggac cgtctgatgc aggcgctggg cttgccgggg
     1741 aaatcctttg tgccgctgat cgtcggtttc ggttgtaacg taccgtcggt aatgggtgca
     1801 cgtacgcttg atgcaccgcg tgaacgtctg atgaccatca tgatggcacc gtttatgtcc
     1861 tgcggcgcgc gtctggctat cttcgcagta ttcgcggctg ccttcttcgg gcagaacggt
     1921 gcgctggcgg tcttctcgct gtatatgctg ggtattgtga tggcggtgct gactggcctg
     1981 atgctcaagt acaccatcat gcgcggtgaa gcgacgccgt ttgtcatgga gttgccggtc
     2041 tatcatgtac cacacgttaa aagcctgatt atccagacct ggcagcgtct gaaaggcttc
     2101 gttctgcgtg ctggtaaagt gatcatcatc gtcagcattt tcctgagcgc tttcaacagc
     2161 ttctcgctga gcgggaaaat cgtcgataac atcaacgact cggcgctggc gtccgtcagc
     2221 cgggtgatca ccccggtctt caagccaatt ggcgtgcatg aagataactg gcaggcaacg
     2281 gttggcctgt ttacaggtgc catggcgaaa gaagtggtag tgggtacgct caacaccctc
     2341 tacaccgcag aaaatattca ggacgaagag ttcaatccgg cagagtttaa cctcggtgaa
     2401 gagctgttca gtgcgataga tgaaacctgg cagagcctga aagacacctt cagccttagc
     2461 gtactgatga accccattga agccagcaaa ggcaacggcg aaatgggtac cggggcgatg
     2521 ggcgtgatgg atcagaaatt cggtagcgca gcagcagctt acagctacct gattttcgtc
     2581 ctgctgtatg taccatgtat ctcggtgatg ggagccatcg cccgtgaatc aagccgtggc
     2641 tggatgggct tctccatcct gtgggggctg aatatcgctt actcgctggc aacattgttc
     2701 tatcaggtcg ccagctacag tcagcaccca acttacagcc tggtgtgcat tctggcggtt
     2761 atcctgttta acatcgtggt tatcggtctg ctgcgccgcg cgcgtagccg ggtggatatc
     2821 gaactgctgg caacccgcaa gtcggtaagc agttgctgcg cagccagcac caccggtgat
     2881 tgccattaat ggcttcactt attcaggtgc gcgatttgct ggcgttacgg ggccgtatgg
     2941 aagcggccca gataagccag acattgaaca ctccacagcc aatgattaac gccatgctgc
     3001 aacaactgga aagtatgggc aaagccgtgc ggattcagga agaacctgac ggctgcctct
     3061 ctggcagttg taaaagctgc ccggaaggaa aagcctgtct gcgcgagtgg tgggcgcttc
     3121 gttaacctta ctccatcgcc tgttttggaa agcccggtat gcgtctgcat ccgggctttt
     3181 ttgcgtgcgg ctttccataa aaatgcaact cttgcagcac ggcgtaagtt cctttgaaag
     3241 catctcgcag ggatgaaaac tcgctaatac acaggtgtgg agtggcgcgt agagtcgcgg
     3301 cattcaaaca acaggtgaag gaacgccatg agcaaaaagc agagttccac cccacacgat
     3361 gcgctgttca aactcttttt acgccaaccg gacacggctc gtgattttct tgcgtttcat
     3421 ttaccggcac ccattcacgc gctttgtgat atgaaaaccc tcaagctgga gtcgagcagc
     3481 tttattgatg acgatctgcg tgaaagctat tccgatgtgc tgtggtcggt gaaaacggaa
     3541 caaggaccag gatacatcta ttgtctgatt gaacatcaaa gcacctcaaa caaactgatc
     3601 gcatttcgca tgatgcgtta cgctattgcc gcaatgcaaa atcaccttga tgctggatac
     3661 aaaacgttgc cgatggtggt gccattgttg ttttaccacg gtattgaaag cccctatccc
     3721 tattcgctgt gttggctgga ttgtttcgcc gatcccaaac tggcaaggca gctttatgcc
     3781 tccgcatttc cgctgattga tgtcaccgtc atgcctgatg atgaaatcat gcagcaccga
     3841 cgtatggcgc tgctggagtt aattcaaaaa catattcgtc aacgcgacct gatggggcta
     3901 gtagagcaaa tgggctgctt attaagtagt ggatacgcta atgacagaca aatcaaaggg
     3961 ctgtttaatt acatactgca aaccggcgac gcggtacgtt ttaacgattt tatcgacggc
     4021 gttgccgaac gttcaccgaa acacaaggag agtttaatga caattgcgga aagattgcgg
     4081 caggaggggg aacaatccaa agccctgcat atagccaaaa taatgcttga atccggagtc
     4141 cctcttacag acatcatgcg ctttaccggg gtgtcagaag aagagttggc tgcggcgagc
     4201 cagtaaattt ctgtctcgcc atttcaaaag ttgcctacac cctctgcttc aacgccacca
     4261 gcaggtgaca aaactcgacc ggatgcgaaa taaacggcgc atgggccgct ttggcgaaga
     4321 tatatgattt gctgcgaggc cagagtttat ccagcatcgg caccactttg cgcggcacca
     4381 gaccatcgag atagccatac aatcgcaaaa acggcatggg cacgttttgc agcggctgac
     4441 ggagatcaac cgttttcagg atttccagcc cgccattaag cacgtcaacc tccggcatcg
     4501 gtaacgccag aacggttttc ttcaacgccc gcgcatcctg gcgcgccgtt tcagtcccca
     4561 tggtttgtaa cgccaggaac cgctccactg tacgctgaaa atcatcactg agttgctgct
     4621 gaaatcccgc cagcacgtcc ggttttatcc ccggccaatc gtcacgagca ctaaaacaag
     4681 gtgacgacgc cacggtgacc agcgcctgaa cacgctcggg atgggttaac gcaatctggc
     4741 ttgccaccag cccgcccaga ctccagccta accaaatggc tttatcaggt gcctgttgca
     4801 gcacggcttc ggccatatca gcaagtgaca gcgcaccaaa tccctggctg cgcccgaagc
     4861 cgggcagatc aacaaggtgc agcgtaaaat gcgagctaag ttcctcgtca atgcaacgcc
     4921 acacttcggc attcagtccc catccgtgca gcagcacaag atgaacattc ccctgacctt
     4981 tggtctgcca ccagatgtta ttcatccgct attgttctct tttgacttac aaggatgaac
     5041 atatgctaac agtaccggga ttatgctggc tatgccgaat gccgctggcg ttaggtcatt
     5101 gggggatttg ttcggtctgc tcacgcgccg cccgtacaga taaaacgtta tgcccacaat
     5161 gtggattacc cgccacacac tcacatcttc cctgcggtcg ctgcctgcaa aaaccaccgc
     5221 cctggcaaag actggtcacg gttgccgact atgcgccgcc gttaagtccg cttatccacc
     5281 agcttaaatt ttcccggcgc agtgaaatcg ccagcgccct gtcacgtctg ttactattgg
     5341 aagtcttaca cgctcgtcgc accaccgggt tgcaattgcc ggatcgcatc atcagcgttc
     5401 cgttatggca gcggcgtcac tggcgtcggg gatttaatca gagcgatttg ctgtgtcagc
     5461 cgttatcacg ctggttgcac tgccgatggg atagcgaagc cgtcacacga acacgggcca
     5521 ctgcgaccca gcattttctc agtgcccggc tacgcaagcg caacctgaaa aatgcctttc
     5581 gtcttgaatt gcccgtgcaa ggtcgccata tggtgattgt ggatgatgtc gttaccaccg
     5641 gaagtaccgt cgcagagatt gcgcagttgc ttttacgcaa tggtgcggcg actgtccagg
     5701 tctggtgcct ttgtcgaacc ttgtagagcc tcgatgatag gcgtattata accaactaaa
     5761 atagtcaact attaggccat tactatgatc cgtatttccg atgctgcaca agcgcacttt
     5821 gccaaactgc tggcaaacca ggaagaaggg acacaaatcc gcgtatttgt gattaaccct
     5881 ggcacgccta acgctgaatg tggtgtttct tattgtccgc cggatgccgt ggaagccacc
     5941 gacactgccc tgaaatttga cctgctgacc gcgtatgttg atgagttaag cgctccttac
     6001 ctggaagatg cagagatcga ttttgttacc gaccagttgg gttctcagct aacactgaaa
     6061 gcgcctaacg ccaaaatgcg taaagtggca gacgatgcac cactgatgga gcgcgtggag
     6121 tatatgctgc agtcgcagat caacccacag cttgctggtc acggtggccg cgtttcactg
     6181 atggaaatca ccgaagacgg ttacgccatt ctgcaatttg gcggcggctg taacggttgt
     6241 tccatggtcg atgtgacgct gaaagaaggg atcgagaagc agctgctaaa cgaattcccg
     6301 gagctgaaag gtgtgcgcga tctcaccgaa caccagcgcg gcgaacactc ctactactaa
     6361 gttatcccct cttttgtaga ttgcccgatg cgacgctaaa gcgtcatttc gggcctacgt
     6421 tgaacatgtg ccagacgttg gcgcagcatt gctttggcaa atccctccct tcgtttctcc
     6481 gcgataatat gaccaacctc tcataattta aatttactcc gctctggtga ttctcaaacg
     6541 ccagatgtta ccggtatcat tcacatgggt accaaacata ctcctgacat ctgactacaa
     6601 taattagttt tagtgggtat cagtcgtggt gccgcaatat ctctgttccc gattgggata
     6661 attagagttt gtcgtcagaa aattgacgtt acccataaca aatgaaaggc caggtaaatc
     6721 atgccattag tcattgttgc tatcggtgta atcttgttgt tgctcctgat gatccgtttc
     6781 aaaatgaacg gcttcatcgc tctcgtcctc gtggcgcttg ctgttggatt aatgcaaggg
     6841 atgccgctgg ataaagttat tggctccatc aaagccggtg tcggcgggac gctcggtagc
     6901 cttgccctga tcatgggttt tggcgcgatg ctgggcaaaa tgctggcaga ctgcggtggc
     6961 gcacaacgta tcgccaccac cctgattgcc aaatttggta aaaaacacat ccagtgggcg
     7021 gtggtactga ccggttttac cgttggtttt gccctgttct atgaagtggg ctttgtgctg
     7081 atgctgccgc tggtgtttac catcgcggct tctgcgaata ttccactgct gtatgttggt
     7141 gtaccaatgg cagctgcact gtctgtgacc cacggcttcc tgccaccgca tccgggtccg
     7201 actgcgattg ccaccatttt caatgccgac atgggtaaaa ccctgctgta cggtactatt
     7261 ctggcaatcc cgaccgtgat tctcgccggt ccggtttacg ctcgcgtgtt gaaaggtatc
     7321 gataagccga tccctgaagg tctgtacagc gcgaaaacct tcagcgaaga agagatgccg
     7381 agctttggcg tcagcgtctg gacctctctg gtgccggtag tgctgatggc gatgcgtgcg
     7441 attgccgaaa tgatcctgcc gaaaggtcac gctttcctgc cggtagcgga gttcctcggt
     7501 gacccggtaa tggctacgct gattgccgtg ctgattgcga tgttcacctt tggtctgaac
     7561 cgtggtcgtt caatggatca gattaacgac acgctggttt cttccatcaa aatcattgcg
     7621 atgatgctgt tgatcatcgg tggtggcggt gcgttcaagc aggtgctggt agacagcggc
     7681 gtggacaaat acattgcttc catgatgcac gaaaccaaca tttctccgct gctgatggcc
     7741 tggtcgattg ctgccgtact gcgtatcgcg ctgggttccg caaccgttgc ggcaatcact
     7801 gcgggtggta tcgcggcacc gctgattgca acgacgggtg ttagcccgga gctgatggtt
     7861 attgcggtgg gttccggtag tgtgattttc tctcatgtga acgatccggg cttctggctg
     7921 ttcaaagagt actttaacct gactatcggc gagaccatca aatcctggtc gatgctggaa
     7981 accattatct cggtgtgcgg tctggtaggc tgtctgctgc tgaatatggt gatttgataa
     8041 cactgactgc cggatgcatc gcatccggca tcaaccgcac tctactgctt cttcgctgca
     8101 gctctgcgcc gtctgtccaa atccttcagc aacttattca cgccatcatc ggcaaacatc
     8161 gtctcaagcg ttgcggaaag cttgcgtcgc cagtttttat actggtaact ggtgccagga
     8221 atattcaccg gttcggccat atccagccag tcttccggct gtagtcctaa cagagcactg
     8281 ttactgtcgg caatgtagcg ctgcaaacca cgattaagcg tcggcgtcat cgacatcaac
     8341 gatgccttat gcccggcacg ttttggcaga caaccatatt tatgcagtgc atccagcagc
     8401 ccttgcttcg ccagttcgcg atcctgatac agaccgcgca gtaccacttc atccggatac
     8461 agccccaggg ttttgcccaa cgttagatcc ccgctctccc agtaaccgcg cagcgtaggc
     8521 aggtcatgtg tcgccgcaac cgccatcgac tgctccggat acgctttcgg tgcacggaac
     8581 gtcttctcgt ggtcgttttc gaaatagagc actttgtagg agtacacacc gctgctgcgc
     8641 agcttaccga caatctctac cggtacggta ccgagatctt caccaatcac catacagcga
     8701 tgacgtttac tttcgagtgc cagaatcgag agcagatcat ccaccggata gtgaacatac
     8761 gcgccctgat ctgccgtctc gccatacggt atccaccaca aacgcagcat cgacatcaca
     8821 tggtcaattc gtaatgcgcc gcagttttgc atattggcac gcaacagctc gataaacggt
     8881 tcataggcac gcgcggtgat gatatgcggg tccattggcg gtaatcccca gttctgcccc
     8941 aacgggccga ggatatccgg cggcgcgcca accgacgctt tcaggcaata tagttcacgg
     9001 tcacaccagg tttccgcccc accttccgct acgccaaccg ccagatcacg atacaagcca
     9061 atcggcattt catagccctg gcttatctcc cagcaggcgg caaactggct gtaagccagc
     9121 cactgcaacc agagataaaa atcgacgtca tcacgatgtt cttcgcagaa ctgacgcact
     9181 tctggtgaat ccacgttctg atacatctct ggccatgcag gccagcccca gcgcatttcg
     9241 tcctctttca cttgctgggc atgtagcgca tcaaaggctg cctgccagaa caggctgtcg
     9301 ccctgctctg caacaaactg gcgaaacgcg gtcatctgct catcatcacg ttgcgcgaaa
     9361 cctttccacg ccattcgtaa tgctgtcatt tttagggcgg taaccgtgga gtaatcgacc
     9421 cagtcggcat cgcgcgcctg ttgcagcgtc tgttgcgtgg tcggcaactg ccaccaggcc
     9481 tgagcctctt cgctaagatg gaaatcttca acggcgttaa cgtcgatata aatcacattc
     9541 agccaacggc gagaagacgg actgtatggg ctggcactct ccggatttgc cggatagagc
     9601 gcatgaatcg ggttcaggcc gatgaacgac ccgccacgtt ttgccacatc caccagcatc
     9661 gctttgagat cgccaaaatc cccaataccc cagttttttt ccgatcgcag cgtataaagc
     9721 tgaacgcagg caccccacag cttttgttta ttcagcaacg cctgcggttc gtaacagcgt
     9781 ttcggggcga caatcacccg gcaatgcgcg cgctggtcgt cctgggtgag tgtcagcgtg
     9841 tgataacctt ccggcagctt cgtcggtaga ttgaacgctt tgccccccgt tacatggcct
     9901 ttgtactgtg ttccttcttc ggtggtcagc agccagctat attcgccgct gccctccacc
     9961 accatcggca tttttttgcc gctggtataa accatgacat tcgggactgg cgttaccgcc
    10021 actttcgtgg cggtacgttg atgcatcgcg tcaagcaaac gccgtttggt ttcggcgcta
    10081 atcgactgcg gtttaccgtg ggcattgatg taattggggc taatccccgc cgccagcgcg
    10141 gcattatcca gacgtttgct ttccatcgag cttccttagc gttttgcctg ccagatacga
    10201 gcctgataat cgcgaataga gcgatccgag ctaaacatac cgcagcgggc ggtattgagg
    10261 atcgccgcgc gagtccaggc ctcttggtcg cggtacagca catccacctg cttttgtgcc
    10321 tcaacatagg ctgcgaaatc cgccatcacc agatacggat cgccgccttg tttgccgata
    10381 ctgtgcagca tctggtcgaa ggcatgctta tcgccgtcgc tgtatttacc gctttccagc
    10441 tctttcaata ctgcgtccag caccttatct ttcttccgcc atttcaccgg gtcgtagcct
    10501 ttggccagaa ttgccttcac ttgttccacg gtatgaccaa aaataaagat attttcttca
    10561 ccgactttct cggcgatttc aacgttcgca ccatccagcg taccgacagt aagcgcacca
    10621 ttgagcgcca gtttcatatt gccggtaccg gaagcttctt tacctgcagt cgaaatttgt
    10681 tcggagatat ccgccgccgg gatcagtttt tccgccgccg aaacgcaata atcctgcagg
    10741 aacaccacct tcaacttatc gccaaccagt ggatcgttgt tgatcacgtc agccactttg
    10801 ttgatcgcaa agataatatt cttcgccagg tagtagcccg gtgccgcttt cgcgccgaag
    10861 aggaagacgc gcggtacgcg atcagcctgc gggttttcac gaatttcttt gtacaacgcc
    10921 agaatatgca gcagattcag gtgctggcgt ttgtactcat gcagacgttt aatctgaata
    10981 tcgaaaatcg cctgtggatt gatctcaata ccggtacgaa ctttcacaaa ctccgccaga
    11041 cggactttat tcgcctgctt gatctcgcga tattgctgac ggaatttcgc atcatcagcg
    11101 aatttttcca gattgatcag ctgatcgaga tcgttagccc actctttttg cagtaattta
    11161 tccaacagag ccgccagtgc agggttgcac tgtttgatcc agcgacgtgg ggtaataccg
    11221 ttggtgacgt tatggaattt gttcggccat agctggtgat attccgggaa cagatctttc
    11281 accaccagat ccgagtgcag cgccgcaaca ccgttcaccg cgaaaccgcc aaccacacac
    11341 aggttcgcca tatgcacttg tttatcgtgc accaccgcca gtttggccca cactttttca
    11401 tcgcccggcc aggttttctc caccagcgtt ttaaagcgag tattaatttc gttaataatc
    11461 tgcatatggc gcggcagtaa gcctttcacc agtttcacat cccagcgttc cagcgcttct
    11521 ggcatcaggg tatggttggt gtaagcgaaa gttttgctgg taatggccca ggcgtcatcc
    11581 cagctcatct ggtgctcatc gatcagcacg cgcagcagtt ctggaatcgc gatagttggg
    11641 tgggtatcgt tcagctgaat aacttcataa tccgccagtt cgtgcagttt acgccccgcc
    11701 agatgatggc gacgcaaaat atccgctacc gaacaggcac actggaagta ctgctgcatc
    11761 aagcgcagct ttttaccggc agtatggttg tcgtttggat agagaacttt ggtcagtttt
    11821 tccgcattga tgccctgctg ttcggcacgc aggaaatcac cgtcgttaaa tttagtcaga
    11881 tcaaacggat gcgcgtgcgt cgcctgccac agacgcagcg gctgcgccac gccattacga
    11941 tagccgacaa cggggagatc ccacgcttga ccggtaatgg taaactccgg ctcccagcgt
    12001 ccgtctttcg tcactttacc gccaatccct acctgcacat ccagtgcttc gttgtggcgg
    12061 aaccacgggt agttactgcg atgccagtca tccggcgctt caacctgttt gccatcgaca
    12121 aaagactggc ggaacaaacc atattgatag ttcagaccgt aacccgtcgc agactgaccg
    12181 atagttgcca ttgagtcgag gaagcacgcc gccagacgtc ccagaccacc gttacccagc
    12241 gccgggtcga tctcttcttc cagcaggtcc gtcagattga tgtcataagc cttcaacgaa
    12301 tcctgtactt cctgatacca gccgagattc aacaggttgt tgcccgtcag gcgaccaatc
    12361 aaaaactcca ttgagatgta gttaacatgt cgctgattcg ccaccggctt ggcgaatggc
    12421 tgagcacgca gcatttcggc cagtgcttca ctcactgcta gccaccactg gcgaggagtc
    12481 atttcagccg cagaatttaa gccataacgc tgccactgac gtgaaagcgc ttcctgaaat
    12541 tgcttatcgt taaaaatagg ttgtgacata ggagttccac ttttcttaga ttttcaacac
    12601 aacgttatcg ctagtttgcc aggctcgatg ttgaccttcc tcatcctgcg ggggattagg
    12661 cagggaggag ttgcggggat gagcaaggaa atgtgatctc aaccacttaa agctagtgca
    12721 aaccacagga ttagcagcaa atcaatgcaa tacagcgcag aaaatctgta tctaagtgca
    12781 aaaaatggcc gttgcgtatt ttcaaaaagc ggaaggtaac tctataaatt aagtaaagga
    12841 gtgaaacagt ttcacaagta aaatatccag tgtgctccat ctcattctta atagatttat
    12901 taagatcatc tttttagatg gcactttcat caggaatgaa gaagaaaccc ttgcttaaat
    12961 gaatctgatg aacataaggg aaaccagtat tcacgctgga tcagcgtcgt tttaggtgag
    13021 ttgttaataa agatttggaa ttgtgacaca gtgcaaattc agacacataa aaaaacgtca
    13081 tcgcttgcat tagaaaggtt tctggccgac cttataacca ttaattacga agcgcaaaaa
    13141 aaataatatt tcctcatttt ccacagtgaa gtgattaact atgctgattc cgtcaaaact
    13201 aagtcgtccg gttcgactcg accataccgt ggttcgtgag cgcctgctgg ctaaactttc
    13261 cggcgcgaac aacttccggc tggcgctgat cacgagtcct gcgggctacg gaaagaccac
    13321 cctcatttcc cagtgggcgg caggcaaaaa cgatatcggc tggtactcgc tggatgaagg
    13381 tgataaccag caagagcgtt tcgccagcta tctcattgcc accgtgcagc aggcaaccaa
    13441 cggtcactgt gcgatatgtg agacgatggc gcaaaaacgg caatatgcca gcctgacgtc
    13501 actcttcgcc cagcttttca ttgagctggc ggaatggcat agcccacttt atctggtcat
    13561 cgatgactat catctgatca ctaatccagt gatccacgag tcaatgcgct tctttattcg
    13621 ccatcaacca gaaaatctca ccctggtggt gttgtcacgc aaccttccgc aactgggcat
    13681 tgccaatctg cgtgttcgtg accaactgct ggaaattggc agtcagcaac tggcatttac
    13741 ccatcaggaa gcgaagcagt tttttgattg ccgtctgtca tcgccgattg aagccgcaga
    13801 aagcagtcgg atttgcgatg acgtttccgg ttgggcgacg gcactacagc taatcgccct
    13861 ctccgcccgg cagaataccc actcagccca taagtcggca cgccgcctgg cgggaatcaa
    13921 tgccagccat ctttcggatt atctggtcga tgaggttttg gataacgtcg atctcgcaac
    13981 gcgccatttt ctgttgaaaa gcgccatttt gcgctcaatg aacgatgcgc tcatcacccg
    14041 tgtgaccggc gaagaaaacg ggcaaatgcg tctcgaagag attgagcgtc aggggctgtt
    14101 tttacagcgg atggatgata ccggcgagtg gttctgctat cacccgctgt ttggcaactt
    14161 cctgcgccag cgctgccagt gggaactggc ggcggagctg ccggaaatcc accgtgccgc
    14221 cgcagaaagc tggatggccc agggatttcc cagcgaagcg attcatcatg cgctggcggc
    14281 aggcgatgcg ctgatgctgc gcgatattct gcttaatcac gcctggagtt tgttcaacca
    14341 tagcgaactg tcgctgctgg aagagtcgct taaggccctg ccgtgggaca gtttgctgga
    14401 aaatccgcag ttagtgttat tgcaggcgtg gctaatgcaa agccaacatc gctatggcga
    14461 agttaacacc ctgctagccc gtgctgaaca tgaaatcaag gacatcagag aaggcaccat
    14521 gcacgcagaa tttaacgctc tgcgcgccca ggtggcgatt aacgatggta atccggatga
    14581 agcggaacgg ctggcaaaac tggcactgga agagctgcca ccgggctggt tctatagccg
    14641 cattgtggca acctcggtgc tgggtgaagt gctgcactgc aaaggcgaat tgacccgctc
    14701 actggcgcta atgcagcaaa ccgaacagat ggcacgccag cacgacgtct ggcactacgc
    14761 cttatggagt ttaatccagc aaagtgaaat tctgtttgcc caagggttcc tgcaaaccgc
    14821 gtgggaaaca caggaaaaag cgttccagct gatcaacgag cagcatctgg aacagctgcc
    14881 gatgcatgag tttctggtgc gcatccgagc acaactgtta tgggcctggg cacggctgga
    14941 tgaagccgaa gcgtcggcgc gtagcgggat tgaagtcttg tcgtcttatc agccacagca
    15001 acagcttcag tgcctggcaa tgttgattca atgctcgctg gcccgtggtg atttagataa
    15061 cgcccgtagc cagctgaacc gtctggaaaa cctgctgggg aatggcaaat atcacagcga
    15121 ctggatctct aacgccaaca aagtccgggt gatttactgg caaatgaccg gcgataaagc
    15181 cgccgctgcc aactggttgc gtcatacggc taaaccggag tttgcgaaca accacttcct
    15241 gcaaggtcaa tggcgcaaca ttgcccgcgc acaaatcttg ctgggcgagt ttgaacctgc
    15301 ggaaattgtt ctcgaagaac tcaatgaaaa tgcccgcagt ctgcggttga tgagcgatct
    15361 caaccgtaac ctgttgctgc ttaatcaact gtactggcag gccggacgta aaagtgacgc
    15421 ccagcgcgtg ttgctggacg cattaaaact ggcgaatcgc accggattta tcagtcattt
    15481 tgtcatcgaa ggcgaagcga tggcgcaaca actgcgccag ctgattcaac tcaatacgct
    15541 gccggaactg gaacagcatc gcgcgcagcg tattctgcga gaaatcaatc aacatcatcg
    15601 gcataaattc gcccatttcg atgagaattt cgttgaacgt ctgctaaatc atccggaagt
    15661 gccagaactg atccgcacca gcccgttgac ccaacgtgaa tggcaggtcc tggggctgat
    15721 ctactccggt tacagcaatg agcaaattgc gggcgagctg gaagtggcgg caaccaccat
    15781 caagacgcat atccgcaatc tgtaccaaaa actcggcgtc gcccaccgtc aggccgcggt
    15841 acaacacgcg cagaaactgc tgaagatgat gggatatggg gtgtgagttt agccggataa
    15901 tgcattggat ccggtttaca tctttacatc attcaatact cacccgcgtt acgccatcta
    15961 tttctatcaa accaaaccgc accggcaaga aacgctccac cacggcgata ttggtcagca
    16021 aatggcatga aggatgggcg accgtaaatt ctcccgcgcc cgccagcgcc atcggtagca
    16081 ccagctggtc ggcgagatat tcccccactg ccgccgggct tgccaggtag cgtttcacct
    16141 ctttcactaa ctgcgcggct accacctcgg cactgacgcg cttttcaccg acgacgaaaa
    16201 agcgttcagt gatattttca ctttcgactt ccagcgagac ggtattaccc ggcccctggt
    16261 cgcgcggcag gttatgaata ttctgttcat gcagggaaaa actccccgcc agtgtagcga
    16321 tttcacgctc agcaacatgg cgcggcacac cagctaatag aacttctcca cgcatctgca
    16381 caatgttccc gcgctcgcca agttgcaagg tgttaaacga tgccacgggc gagacttccg
    16441 ttgccaccac gccgcctccg gcaggataaa aaccgtgacg taacagcgtg gtttgctgat
    16501 gaattcctat tttcgccagc agcggctcca gcacccggcg gataaaatcc gcaggcggcg
    16561 ccgacgggtt atcggtgcct ccgctcactt caacacgcga aggtccatcg gcaaaccaca
    16621 gcgcgggcag caccgtttgc agcaccagcg tacagcttcc ggcactaccg atagcaaagc
    16681 ggtactcgcc gccgcgcacg gcgccaggcc ggaagaccag acgctgcgac cccagctccg
    16741 cgccttccac cgttgcccta caaatttccg cagccgcttt taccgcggtc agatgctggc
    16801 gcaacagccc cggtttcgcc cgcccggcac gaatgctggt gatggtaaat ggctggccgg
    16861 ttatcatcga caggctcagc gccgagcgca gaatctgccc gccaccttcg ccctgtgcgc
    16921 catccagcgc aatcatcctt ttcatcattt atccttttac gcacaccacc tgacgcaggg
    16981 tatagataac ttccaccaga tcgctttgtg ccgtcatcac cgcatcaata tctttatacg
    17041 ccatcgggat ttcgtcgatc acttcggcat ctttacggca ttccacatgc gcggtggcac
    17101 gaatttgatc ttccacgctg aacagttttt tcgctttagt tcggctcatt acccgcccgg
    17161 caccgtggct gcacgaacag aacgactctt catttcccag cccacggacg ataaagcttt
    17221 ttgctcccat cgaaccggga ataattccat attgaccagc acgcgcagac accgcgcctt
    17281 tacgcgtcac gtagatctct tcaccaaagt gctgttcttt ttgcacatag ttgtggtgac
    17341 agttgatctc ttccatcgcc agcgtttgtg gctgtctgac cgttttctgc gtaatgctct
    17401 gcaatgccgt taccacgttt tccatcatca catcgcggtt aaggctggca aaaagctgcg
    17461 cccaggccac ggctttcagg taatcatcaa agtattccgt accttccata aagtacgcca
    17521 gatcacgcga cggcaacgtc tcaagcgttt cctgcatctc tttttgtgcc agatcgataa
    17581 agtaagtccc gatggcgtta ccaattccgc gtgaaccgga gtgcagcata atccacacct
    17641 ggtccgactc atcaaggcag attttaataa agtggttacc ggttcccagc gttcccaggt
    17701 gtttatagtt attggtattc aggaaacggg gatatttttg cgttaaccac tgataaccgg
    17761 cttcaagctc agcccatttc gcatcgacgt tgacaggcgg gttttcccat gcgcctttat
    17821 cacgtttaca acgcccggta gtacgcccgt gcggcacggc cgtttcaatc gcctgacgca
    17881 gctctgccag gttttcaggc aggtcttccg ccgttaacgc ggtacgcagc gcgttcattc
    17941 cacagccaat atccacgccc accgccgccg gaataatcgc ccctttggtc gggatcacgc
    18001 taccaatggt ggaatcttta cccaggtgta catcaggcat taccgcaata tgtttgaaaa
    18061 taaacggcat cttcgccgta ttaataagtt gctgacgcgc atcggcttct accggcacgc
    18121 ctttggtcca catttttacc ggggcatttt cagtggtcag taattcgtaa ttcattttgt
    18181 ttttctcttt tcgttgtttg ctgtcctgat aattgcaacc gtcgtgccag aaaattaaat
    18241 aagtaaatta attttttaat tcattgtttt taaaaagatt atatctttat gtccgtaacc
    18301 ggagatttcc cgcaaagccg atttaccgat aatgaaatat cgtcttttat aaggatatct
    18361 aagatgcgta aaacagtagc ttttggcttt gtcggaacgg tgctggatta tgccgggcgc
    18421 ggcagtcagc gctggtcaaa atggcatccg acactctgtt tatgccagca agaatcgttg
    18481 gtcatcgatc gactggaatt attgcatgac gcccgctcgt gctcgctatt tgaaacgctt
    18541 aaacgcgata tcgccagcgt ttcgccagaa acagaagtgg tgagcattga gattgaactg
    18601 cataacccgt gggatttcga agaggtttac gcctgcctgc atgatttcgc ccgtggttac
    18661 aagtttcagc cagaaaaaga agactattta attcacatca ccaccggcac ccacgtcgcg
    18721 cagatttgct ggtttctgct ggcggaagcg cgttatctac ccgcccggtt gatacaaact
    18781 tcaccaccgc gcaaaaaaga acaaccgcgc ggtgccggtg aagtgacgat tatcgatctc
    18841 gatctaagcc gttataacgc catcgccagc cgctttgccg aggaacgcca gcaaacgctt
    18901 gattttctta agtccggcat tgccacgcgt aacccccact tcaaccgcat gattgagcag
    18961 attgaaaaag tggcgattaa atcccgcgca ccgatcctgc ttaacggccc aaccggtgcg
    19021 ggaaagtcat ttctggcgcg acgtatattt gaattaaaac aggcgcggca tcagtttagc
    19081 ggcgcgtttg tggaagtgaa ctgcgccacc ctgcgcggcg ataccgccat gtcgacgctg
    19141 tttggtcatg tgaaaggcgc gtttaccggg gcgcgggaat ctcgtgaagg tttattacgc
    19201 agcgccaacg gcggaatgtt gttttttgat gagattggcg aactgggcgc agacgaacag
    19261 gcaatgctgc taaaagccat tgaagagaaa accttttacc cgtttggcag cgatcgccag
    19321 gtgagcagtg attttcagct tatcgccgga acggtgcgcg atttgcgcca gctggttgcc
    19381 gaaggcaaat ttcgcgaaga tctgtacgcg cggatcaatc tctggacctt caccctgccg
    19441 ggtctacgcc agcgccagga agatattgaa ccgaaccttg attatgaagt ggagcgccac
    19501 gccacactca ctggcgacag cgtgcgtttt aacaccgaag cgcggcgcgc ctggttggct
    19561 tttgcgacct ctccccaggc aacatggcgc ggtaactttc gcgaactttc tgccagcgtc
    19621 acgcggatgg ccacctttgc cactagcgga cgcatcactc tggacgtggt tgaagatgag
    19681 ataaaccgtc tgcgctataa ctggcaggag agccgcccct ccgcgcttac ggcgttgctg
    19741 ggcgcagagg cagaaaacat cgatctcttc gaccgtatgc aactggaaca cgttatcgct
    19801 atctgccgcc aggcaaagtc gctttctgca accggacgac agctttttga tgtttcgcgc
    19861 cagggaaaag ccagcgtcaa tgacgcggat cggctacgca aatacctggc gcgttttggt
    19921 ctgacgtggg aagccgtgca ggatcagcac agctccagtt gaatatgatg gtccgtcagc
    19981 acctgcatta cgcttactgg cggcggggcg tcggtgtaga cggcatctac catgctgatg
    20041 ctgcccatat tgaccatcgc gttacggcca aatttcgagt gatcgacaac cagcataacg
    20101 tggcgcgagt tctcaataat ggcgcgcttg gtgcgaactt cgtggtaatc gaactccagc
    20161 agcgagccgt cgctatcgat gccgcttatc cccagaatgc cgaaatcaag gcggaactgg
    20221 gagataaaat cgagcgtcgc ttcgccaatg atcccgccat cgcggctgcg taattcgcca
    20281 ccagcgagaa taatgcggaa atcttctttt accatcaacg tgttagcaac attgagattg
    20341 ttggtgacaa tacgcaaatt gctgtgatta agcagcgcgt gcgccaccgc ttccggcgtg
    20401 gtgccgatat cgataaacag tgtcgagccg ttggggattt gctccgccac tttgcgggca
    20461 atcctctctt tttcttcggt ctgggtggct ttgcgatcgt gccacggcgt gttaaccgaa
    20521 ctggaaggca gcgccgcacc gccatggtga cgcaggatca ggttttgctc cgccagctca
    20581 ttgaggtcgc ggcgaatagt ctgcgggctg acggagaaat gctctaccag ctcttcagta
    20641 ctgacataac cctgctgttt aaccagttcg ataataccgt tgtgacgttg tgtttgtttc
    20701 atttataaat ccctggaatt attttcgttt tcgcgcattg agcgaatcaa caaaagccat
    20761 cgctaaaccc acggctaacc cggcgatgtg tgctccgttc gccatcgaca tcccaaacaa
    20821 atcaaaccat ccggcgataa tccagatcag cgcaaagata attaacccac gttgcaggta
    20881 aatgccactt tgcggatcgc gctcaccacg tagccagacg tagcccatca gcgcatacac
    20941 cacgccagaa agcccgccaa accacggccc gctgaatttt tgctgcacat agccgcttaa
    21001 cagggcacta atgagagtaa taacaattag cttaccgcta ccgaggcgtt tttccaccgc
    21061 accgccgaga taccaccacc agagcaggtt aaagaggata tgcatcagcg agaagtgcat
    21121 taacgcgtgg gtgaagtaac gccagaactc aaatttcagt gttggatcga atggccaggc
    21181 cagccataac atcacttcct gatcgccgag aatttgcatg gcgataaaca ccaccacgca
    21241 ggcgatcatc accacccagg ttaccggacc tgcgcgttca cgcaaggcag caaagaaagg
    21301 ataacggcga taatgcagac cactgccggt atggcccgcc tgccagctgg ccgccagata
    21361 acgcggatct gccgggtttt cgagaaaacg cgccagctcc gcccgcacgc gctcggcctg
    21421 ggactcatcc gccagccaga catcgctttg gttatgttgt tgaatcgtaa ggataacacc
    21481 ctgcgtcgcc atgtaatcaa caaacgcctg cgccacgcgg gggttagcaa aagaggtaat
    21541 catcaacatc gttgctgtcg cttattccac acaaaagggg acagtataaa gcgttacgcg
    21601 ccgtacgcca cctctgcggg aaactgacgc tgccaggctt caaaaccgcc gtcaatgcta
    21661 tagaccacat cgtagccctg ttgcagcaga tactgcgccg cgcctttgct gctattgccg
    21721 tgataacaca tcaccatcac cggagtgtca aagtcgttat cacgcataaa cgcgcccagc
    21781 gtgtcgttgg ttaaatggaa agcctgcacc gcatgtccca ttgcgaaact ctgtggatcg
    21841 cgaatatcga ccagcaccgc ctctttttcc tgcaacttct ggtgcgcgtc ggcaacgtta
    21901 atacattcga acagatccat gcgtctctct ttctttacaa acaagtgggc aaatttaccg
    21961 cacagtttac gtcgaagcgg cagataaacg ccataatgtt atacatatca ctctaaaatg
    22021 ttttttcaat gttacctaaa gcgcgattct ttgctaatat gttcgataac gaacatttat
    22081 gagctttaac gaaagtgaat gagggcagca tggaaaccaa agatctgatt gtgataggtg
    22141 gcggcatcaa tggtgctggt atcgcggcag acgccgctgg acgcggttta tccgtgctga
    22201 tgctggaggc gcaggatctc gcttgcgcga cctcttccgc cagttcaaaa ctcattcacg
    22261 gtggcctgcg ctaccttgag cactatgaat tccgcctggt cagcgaggcg ctggctgaac
    22321 gtgaagtgct gctgaaaatg gctccgcata tcgccttccc aatgcgtttt cgcctgccac
    22381 atcgtccgca tctgcgcccg gcgtggatga ttcggattgg tctgtttatg tacgatcatc
    22441 tgggtaaacg caccagcctg ccgggatcaa ccggtttgcg ttttggcgca aactcagtgt
    22501 taaaaccgga aattaagcgc ggattcgaat attctgactg ttgggtagac gacgcccgtc
    22561 tggtactcgc caacgcccag atggtggtgc gtaaaggcgg cgaagtgctt actcggactc
    22621 gcgccacctc tgctcgccgc gaaaacggcc tgtggattgt ggaagcggaa gatatcgata
    22681 ccggcaaaaa atatagctgg caagcgcgcg gcctggttaa cgccaccggc ccgtgggtga
    22741 aacagttctt cgacgagggg atgcatctgc cttcgcctta tggcattcgc ctgatcaaag
    22801 gcagccatat tgtggtgccg cgtgtgcata cccagaagca ggcctacatt ctgcaaaacg
    22861 aagataaacg tattgtgttc gtgatcccgt ggatggacga attttccatc atcggcacca
    22921 ccgacgtaga gtataaaggc gatccgaaag cggtgaagat tgaagagagt gaaatcaact
    22981 atctgctgaa agtgtataac gcgcacttta aaaaacagct tagccgtgac gatatcgtct
    23041 ggacctactc cggtgtgcgt ccgctgtgtg atgatgagtc cgactcgccg caggctatta
    23101 cccgtgatta cacccttgat atccatgatg aaaacggcaa agcaccgctg ctgtcggtat
    23161 tcggcggtaa gctgaccacc taccgaaaac tggcagaaca tgcgctggaa aaactgacgc
    23221 cgtattatca gggtattggc ccggcgtgga cgaaagagag cgtgctgccg ggtggtgcca
    23281 ttgaaggcga ccgcgacgat tacgcagctc gtctgcgccg tcgctatcca ttcctgactg
    23341 aatcgctggc gcgtcattac gcacgcactt acggcagcaa cagcgagctg ctgctcggca
    23401 atgcgggggc gataagcgac ctcggggagg atttcggtca tgagttctac gaagcggaac
    23461 tgaaatacct ggtggatcac gaatgggtcc gccgcaccga cgatgccctt tggcgtcgca
    23521 caaaacaagg catgtggctg aatgcggatc aacaatctcg tgtgagtcag tggctggtgg
    23581 aatatacgca gcagaagttg tcgctggcgt cgtaaggatg atgcccggtt gaagtgcaac
    23641 cgggctattt ggattcctta gactattcat tgtaaataat tgaataacgg cccctgagct
    23701 aaaatcgcca aacttaagca cgttacccaa tcgccccact tcttcctctg gtttctattt
    23761 tttctgcacc aatggcaata atatcccaat gcaaaaccaa gctgtgcact aatcgggccg
    23821 acaaaatcag tccaaggctg cggccaaaaa ggggaaaaat tcaggggagg ccagacaaac
    23881 gtcagaaaga aatttcggat attttccagc aacgctgatt tctctggaga aatataaaga
    23941 atgaaattcg agagaattaa ccagaaatag accggcgaaa agaccagcca gcaatgcagt
    24001 ctgtttttta attcaggagg cgttctgcgg gagaat
//
LOCUS       DAJVUK010000051        23494 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.051, whole genome shotgun sequence.
ACCESSION   DAJVUK010000051 DAJVUK010000000
VERSION     DAJVUK010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23494
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.051"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(299..613)
                     /gene="pspE"
                     /locus_tag="OQQ57_001884"
     CDS             complement(299..613)
                     /gene="pspE"
                     /locus_tag="OQQ57_001884"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HCS1956674.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            complement(688..909)
                     /gene="pspD"
                     /locus_tag="OQQ57_001885"
     CDS             complement(688..909)
                     /gene="pspD"
                     /locus_tag="OQQ57_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HCS1956675.1"
                     /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            complement(918..1277)
                     /gene="pspC"
                     /locus_tag="OQQ57_001886"
     CDS             complement(918..1277)
                     /gene="pspC"
                     /locus_tag="OQQ57_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HCS1956676.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            complement(1277..1501)
                     /gene="pspB"
                     /locus_tag="OQQ57_001887"
     CDS             complement(1277..1501)
                     /gene="pspB"
                     /locus_tag="OQQ57_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HCS1956677.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
                     QLADEAKRMRERIQALESILDAEHPNWRDR"
     gene            complement(1555..2223)
                     /gene="pspA"
                     /locus_tag="OQQ57_001888"
     CDS             complement(1555..2223)
                     /gene="pspA"
                     /locus_tag="OQQ57_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HCS1956678.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKESGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            2390..3367
                     /gene="pspF"
                     /locus_tag="OQQ57_001889"
     CDS             2390..3367
                     /gene="pspF"
                     /locus_tag="OQQ57_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HCS1956679.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPATVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            complement(3487..4752)
                     /gene="puuE"
                     /locus_tag="OQQ57_001890"
     CDS             complement(3487..4752)
                     /gene="puuE"
                     /locus_tag="OQQ57_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HCS1956680.1"
                     /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
                     FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA
                     KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
                     FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK
                     ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS
                     GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
                     IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
                     NVIRFLYPLTIPDAQFDAAMKILQDALSD"
     gene            complement(4790..6059)
                     /gene="puuB"
                     /locus_tag="OQQ57_001891"
                     /pseudo
     CDS             complement(4790..6059)
                     /gene="puuB"
                     /locus_tag="OQQ57_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415817.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylputrescine oxidase"
     gene            complement(6061..7548)
                     /gene="puuC"
                     /locus_tag="OQQ57_001892"
     CDS             complement(6061..7548)
                     /gene="puuC"
                     /locus_tag="OQQ57_001892"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HCS1956681.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLVGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
                     FSDCSDLQKAASSTAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDCAHADSVHSFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWMRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(7823..8380)
                     /gene="puuR"
                     /locus_tag="OQQ57_001893"
     CDS             complement(7823..8380)
                     /gene="puuR"
                     /locus_tag="OQQ57_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HCS1956682.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(8407..9170)
                     /gene="puuD"
                     /locus_tag="OQQ57_001894"
                     /pseudo
     CDS             complement(8407..9170)
                     /gene="puuD"
                     /locus_tag="OQQ57_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
     gene            9382..10800
                     /gene="puuA"
                     /locus_tag="OQQ57_001895"
     CDS             9382..10800
                     /gene="puuA"
                     /locus_tag="OQQ57_001895"
                     /EC_number="6.3.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-putrescine ligase"
                     /protein_id="HCS1956683.1"
                     /translation="METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLALNVNSYRR
                     FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH
                     GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            10949..11114
                     /locus_tag="OQQ57_001896"
                     /pseudo
     CDS             10949..11114
                     /locus_tag="OQQ57_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11104..12489
                     /gene="puuP"
                     /locus_tag="OQQ57_001897"
     CDS             11104..12489
                     /gene="puuP"
                     /locus_tag="OQQ57_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
                     /protein_id="HCS1956684.1"
                     /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
                     GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV
                     GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSINLVANFN
                     TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
                     LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
                     LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
                     PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN
                     KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
                     YDGDRTPVSET"
     gene            12623..12868
                     /locus_tag="OQQ57_001898"
     CDS             12623..12868
                     /locus_tag="OQQ57_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HCS1956685.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            13181..14824
                     /gene="sapA"
                     /locus_tag="OQQ57_001899"
     CDS             13181..14824
                     /gene="sapA"
                     /locus_tag="OQQ57_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HCS1956686.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            14821..15786
                     /gene="sapB"
                     /locus_tag="OQQ57_001900"
     CDS             14821..15786
                     /gene="sapB"
                     /locus_tag="OQQ57_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HCS1956687.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            15773..16663
                     /gene="sapC"
                     /locus_tag="OQQ57_001901"
     CDS             15773..16663
                     /gene="sapC"
                     /locus_tag="OQQ57_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HCS1956688.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            16663..17655
                     /gene="sapD"
                     /locus_tag="OQQ57_001902"
     CDS             16663..17655
                     /gene="sapD"
                     /locus_tag="OQQ57_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HCS1956689.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVIADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            17657..18463
                     /gene="sapF"
                     /locus_tag="OQQ57_001903"
     CDS             17657..18463
                     /gene="sapF"
                     /locus_tag="OQQ57_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HCS1956690.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            18531..18884
                     /locus_tag="OQQ57_001904"
     CDS             18531..18884
                     /locus_tag="OQQ57_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HCS1956691.1"
                     /translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEEAV
                     LEIILQELNRRSPSP"
     gene            19252..20040
                     /gene="fabI"
                     /locus_tag="OQQ57_001905"
     CDS             19252..20040
                     /gene="fabI"
                     /locus_tag="OQQ57_001905"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HCS1956692.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            20185..21312
                     /locus_tag="OQQ57_001906"
     CDS             20185..21312
                     /locus_tag="OQQ57_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HCS1956693.1"
                     /translation="MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTARDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETLSLHPISLSLLERLLNSTRVNTQPDNKLAALLCARIN
                     GSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVEHATVQAIQWLTRAPDRFS
                     TAQFSPLLEHEQSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            21380..23314
                     /gene="rnb"
                     /locus_tag="OQQ57_001907"
     CDS             21380..23314
                     /gene="rnb"
                     /locus_tag="OQQ57_001907"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HCS1956694.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGAIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            complement(23392..23494)
                     /locus_tag="OQQ57_001908"
                     /pseudo
     CDS             complement(23392..23494)
                     /locus_tag="OQQ57_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791239.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5308 a         6207 c         6118 g         5861 t
ORIGIN      
        1 aagacgcgtt acaagtttct gtaaatgagt tgcggtaaat gttccaccgt agatttcgtc
       61 caggtaatca gtaattttct gtttcatgtt gcctttcagt ggtagcgatc ccatgaaacg
      121 agagactact ccgcagaaaa taaactgtca attgagcaca agggttttag tcacgcagga
      181 aatcattttt taccagggaa aaagcgtatt tgtgagctga cgcaaataat ctatggggat
      241 gtaaataagg tgtgacagaa aaaaaacggc gcataagcgc cgctcatggt gaattctttt
      301 aacctttgac cttcggcatt gcgatgtctt tcaagccacc ggcgttctca acgtgggtat
      361 atcccatctc gctaaggatc tcttttgctt gccctgactg gcgtccggca ttgcaataca
      421 ctttcacggt gtcgttttta tccggaacgg cggtggcaat gcgctctttc acttccttca
      481 ggggaatatt gatggccccc tgaacgtgct cttgctgata ctgctctgga acacgaacat
      541 cgatccagtg ttcagcggcg aaaacgggca gtgaaaacac cagtgccaga gcaagtaagc
      601 cttttttaaa catgtaagcg tccttctatg gatgaaaatt gccatccatt atacgcctga
      661 gatttaacaa tttttgcgaa actcccctca ccttttataa cgctgtgcca gtttattagc
      721 agcccgactt aacagcggtt ccagcgccac agccagcaac attttcagcg gtcggcgagc
      781 aactgatttt atcgcccagc ccgctacacc cgccgggcca tagcgcagtg cggtaagaag
      841 taccagcttg cctgctaatt tgaaaccagg ctttaccttt tgcccggcct gttgccagcg
      901 agtattcata actttcctca cagttgacgg aaacggctac gtaacgtgaa agtatcggaa
      961 gtgacataac gttccatctc gcgtaaacgc gtttcacttg ccgccagttc acggtcgact
     1021 tcatccagca attcgctgct ggagggtagc tgctcaccaa aggccatgtt gtccggcatt
     1081 ggatcaagcg caaatgacaa aatgatgtaa gcaaccaggg taaacagcgc cagaccgaag
     1141 aaaatcgaca gcaccaccag gatacgcacc agttttaccg gtacatcaaa atagttggca
     1201 atcccggcgc agacgccgcg gaccatgccc tgctgtggaa tacgccataa ttttttattg
     1261 agattaatgc ccgccattag cgatccctcc agttcggatg ttctgcatca agaatagatt
     1321 ccagcgcctg aatacgttcg cgcatccgtt ttgcttcatc agccagttgc gctaatcgct
     1381 gctgctcact ttgcgacaat tcactgcgac cagaacgatt gctgtaatgc agccataacc
     1441 agatcggtaa aacaaacagc acaaaaatgg ttaacggaat agccagaaat agcgcgctca
     1501 taagtactcc ttagacgatg agcggcggcg cgttcggacg ccgcctagat gttattattg
     1561 attgtcttgc ttcattttgg cttttaattg tgccagttgt tcgctgattg catcatcggc
     1621 tttcagttcg gcaaactgat cgtccagcga tttttgttta ccgaagctgt ggctttctgc
     1681 ttccgcttcc atctggtcaa tacgacgttc gaaagattcg aaacgagcca ttgcttcatc
     1741 cagtttgcca ctgtccagct gacgacgcac atcgcgcgac gagtttgccg cctgatggcg
     1801 taacatcaat gcctgctggc gagcgcgtgt ttcgctcaat ttgttttcca gctcaccgct
     1861 ctctttcttc atgcgtgcca gcgtatcgtc caccagcgtc acttcatgtt ccagactctt
     1921 aatcagatcg gtcagtttct gtttttcaat taacgccgca cgtgccaaat cctctctctc
     1981 tttcagcagc gccagttcgg ctttttcctg ccattcaact tcacgcgccg acgcttgttc
     2041 aatacggcga gtcagctgtt tcttttctgc caacgcacgc gccgaagtag aacgtacttc
     2101 aaccagtgta tcttccatct cctggatcat cagacgcacc agtttctgtg gatcttccgc
     2161 tttctctaac agagcgttga tgttggcatt cacgatgtcg gcaaagcgag aaaaaatacc
     2221 cataatgttg tcctcttgat ttctgcgttc aggattgtcc tgctgaactg ttaatacaat
     2281 ttgcgtgcca attttttatc tttttgattt ataaagatct gattgaagaa tcatcagcaa
     2341 catgccagga tgaattagcg aattacacta acaagtggcg aatttcatca tggcagaata
     2401 caaagataat ttacttggtg aggcgaacag ctttctcgaa gtgctggaac aggtttcgca
     2461 tctcgcaccg ctggacaaac cggtgctcat catcggcgaa cgcggcaccg gtaaagagct
     2521 gattgccagc cgcctgcatt atctctcctc ccgttggcaa gggccgttta tttcccttaa
     2581 ctgcgcggcg ttaaatgaaa atctgctgga ttccgaactg tttggtcacg aagcgggggc
     2641 gtttaccggt gcgcaaaaac gtcatccagg gagatttgaa cgtgccgacg gcggtacgct
     2701 atttcttgat gaactcgcta cggcaccgat gatggtgcag gagaaattat tgcgcgtgat
     2761 tgagtacggt gaactggagc gcgttggcgg cagccagcca ttgcaggtga atgtgcggtt
     2821 ggtatgcgcg acgaatgccg atctcccggc gacggtcaat gaaggcactt ttcgcgctga
     2881 cctgctcgac cgactggctt ttgatgttgt acaactgcca ccactgcgcg agcgcgaaag
     2941 cgacataatg ttgatggcag aacactttgc catccagatg tgtcgggaaa tcaagctgcc
     3001 tctgttcccg gggtttacgg agcgcgccag agaaacattg ctgaattatc gttggccggg
     3061 aaatattcgt gaattgaaaa acgtggtgga acgttcagtg tatcgccacg gcaccagcga
     3121 ttatccgctt gatgacatca ttattgatcc ctttaaacgg cgtccgcctg aagacgctat
     3181 cgccgtttca gaaaccacct cgcttccaac actgccgctg gatttacgtg agtttcagat
     3241 gcagcaggaa aaagagttgc tgcaactcag tttgcaacaa gggaaatata accagaagcg
     3301 cgcggctgaa ttactggggt taacttatca tcagttccgc gcgttgttga aaaagcacca
     3361 gatttagcga agttgagcaa tacaacttgc cggatgcggc gtgaatgctt tattcggcat
     3421 acataatcaa taagtcgttt gcaggcctga taagcgcagc gcatcagaca ttattgcgtt
     3481 gggctattaa tcgctcagcg catcctgcaa aattttcatt gccgcatcga attgcgcatc
     3541 cggaatggtc agcggataca ggaagcgaat cacgttgccg tatgcgccac aggtcagcag
     3601 gagcagcccc tgcgccagcg cgcgttgctg gattttctgt gcaatcgccg ctgacggctc
     3661 gcccgtttgc ggatcgttaa actctgccgc aatcatcgac cccaggccgc gtaccgcagc
     3721 aatggccgga acgctttctt tggcatcaat caacgtgttt ttgagacgct ggcccagttg
     3781 attcgcgcgt tcgcagagtg attctttgtc gataatattg agcaccgcgt gcgcggcagc
     3841 caccgccagc gggttcccgg cgtaggtgcc acccaacccg cccggcgcgg gcgcgtccat
     3901 aatattcgcg ttaccgacca cgcccgaaag cggcatcccg cccgcgaggc ttttcgccat
     3961 cgtcattaag tccggcttat cggcgtaatg atccatggca aacagtttac cggtacgcgc
     4021 aaagccgctt tgcacttcat cggcaatcat cacaataccg tgctcgtcgc acaggcggcg
     4081 aatggcggca accagctctt ttggcgcaac gttgaaaccg ccctcgccct gcaccggttc
     4141 gaaaataatg gccgccacct gcttcgcttc aatgtccgat ttaaacaagc gttcgatggc
     4201 gtcgagggag tcctgtgttg aaatgccgtg taaatctgac ggataaggta cgtgatacac
     4261 cgaaccaggg aacgggccga agccgatttt gtacggcgca acttttccgg tcagcgccat
     4321 ggtcatatat gtacgaccgt ggaagccgcc gctaaacgca atcacgccag gtcgtccggt
     4381 atgggcgcga gcaattttca ccgcgttttc caccgcttcc gcgccggtag tgaagaatgc
     4441 ggttttagcc tgcccgctca ctggggcaag ggcgttaatt ttctccgcca gcgtgacgta
     4501 gctttcgtac ggcacaatct gatacgccgt gtgggtaaac tgttgcaatt gctgctccac
     4561 cgccgcgacc agatcagggt ggcgatgccc ggtattcagc accgcaatgc ctgcggcgaa
     4621 atcgatgtat tcgttgccct ctacgtcctt cagcgtagcg ttttctgccg actgggcgaa
     4681 gaagttacac atcacgccaa ccccgcgtgg ggtagcagaa agacgacgct gatggaattc
     4741 attgttgctc atgtttcaca ccttttgact cttcactgtt aatcggaaat taaacgccca
     4801 gacgatcgcg caggctgtaa taagccgcgc ccatcgcggt aaatggcacg cgcagcgtgc
     4861 gcccgccggg gaacgggtaa tgcggcagat tggcgaaggc atcgaaacgc tcggcgtcac
     4921 cgcgcagcag ttcagcaatc aaacgcccgg cgaggtgggt acaggtgacg ccgtggccgc
     4981 tgtagccctg catgtaatag atgttggtat cgaggcgacc gaactgcggc atccgtgaaa
     5041 gggtcagcag gaagttgccc gtccagcgat agtcgatttt gacgcccttc agctgcggga
     5101 aggttttcag cagtttcggc acaacaagac gctcaacgtc atccgggtcg cgcgcgccgt
     5161 agaccacgcc gccgccgtac agcaaacggt tgtcggcggt aagacggtag taatcaagca
     5221 gataattaca gtcttccaca cagtagtttt tcgggatcag cgaacgggct aaatcttccg
     5281 acagccgttc ggtggtgatc acctgcgtgc cgcacggcat gctgcgtttc gccagttccg
     5341 gctctacttt atcgcccaga tacgcattcc cggcgacaat cacatacttc gccgtcacct
     5401 gacctttggc agtgcgcaca acggctggcg tggtgtgctg gatctgcgtc acggcagaaa
     5461 gttcatacac gcgcccgccg ttgaggcgga tggcgtccgc ttcgccaatg gcgaggttta
     5521 gtgggtgaat atgcccaccg ctgtgatcca gcagcgcacc ggtatagcga tcgctggcta
     5581 cttcacggcg aatggcgttg gcgtccagca attccagctg tttattgccg tagcgttccc
     5641 agttctcttt ctgctcttca agtgtggcga gctgtttatc attcatcgcc acaaacaggc
     5701 tgccggggcg gtagtcgcag tcaatctgat aacgtttgat acgttcgcgg atgatctcac
     5761 caccttcgaa catcatgctg ccgagcatag gggcggtgtc catgccgtag cttttttcga
     5821 tcacgtcgat gtcgcggttg taggagttca caagctgccc gccattgcgc ccgcttgcgc
     5881 caaagccgat gcgtgaggct tcgagaacca ctacgtcaaa gcccgcttcc gccagatgca
     5941 gcgcggagga gagcccggta tagccgccgc caaccacgca aacgtcgcag gtgattgact
     6001 cattcagggt gtcgaatggc acgtatttat gcgtaataac tgctggtatg ttcggtcatt
     6061 tcaggcctcc aggcttatcc agatggtttt cagttcggtg aatttttcaa gggcatgcag
     6121 ggatttgtcg cgaccgttgc cgctctgctt atagccgcca aacggcacgg tcatatcgcc
     6181 gtcgttgtag ttattgacga agacggaacc ggctttcagg cggcggctca tacggtgcgc
     6241 gcgggagagg tcgcgcatcc ataccgccgc gccaaggccg tactggctgt cgttggcaag
     6301 ctgtagcgcc tgttcttctg atgtgaaacg cgtgaccacc agcaccggac cgaaaatctc
     6361 ttcgcggctt aaggacgcat tcgggtctac atccacaaag atggtcgggc cgatggcggc
     6421 agccagcccg gcgttacggc catccagcag cagttgccct ttgccttcgc cctcacgaat
     6481 aaagctatgg accgagtcgg cgtgggcgca gtcgattaaa gtgcccatgg tggttgcggg
     6541 gtcaagcgga tggcccggct gccagttttg cgcctgctgt tttaacaggg ctaagaattc
     6601 atcggcgatg ctctcttcca gcaacaggcg tgttccggcg atgcacacct gaccctggtt
     6661 gtagaagatg cctgctgcgg tggagctcgc cgctttttgc agatccgaac aatcggagaa
     6721 aacgatgttg gcgcttttgc cgcccgcttc cagccagacg cgtttcatgt tgctgtcgcc
     6781 cgcatctttc agcagctgtt tcccggtacg ggttgaaccg gtaaaggcaa tggcgtcgat
     6841 atcgttatga cgcgacagcg cctgccccgc ttcatgacca aaacccgtca ccacgttcaa
     6901 cacaccatcc ggcaagcctg cttctttcgc cagccccacg agacgaatcg cactgagcgg
     6961 tgatttttca gacggtttta gaatcacgct gtttcccgcc gccagcgccg ggccgagttt
     7021 ccagcaagtc agcaacagcg ggaagttcca cggcacgatg gcggcaatca cgccgaccgg
     7081 ttcacgcacg atcatcgcca gctcatggct actggtggtc gccacttcgc catacacttt
     7141 gtcgatcgct tcggcgtacc agcgaatggc gcgcgccgcg ccgggaatat catcacgcag
     7201 actgtgacga atcggtttgc cggtgtcgag agtttccagc agtgccagct cttcggcgtg
     7261 ggcttccatt aaatcggcga gtttattcag taccgcttta cgtttagccg gagaagagag
     7321 tgaccagtcg ccgcgttcaa atacgccgcg tgctgcgctc accgcacggt cgatatcgac
     7381 gctcttgccg cgggcaattt tcgccagcgg tgcctgggtg actggatcaa cggtttcaaa
     7441 ggtttcattt tccgccgcag cagtatattc accgttaata aataagcggt tttcaatggc
     7501 gagacttaac gctttatcct gccagtaagc cagatgatga aaattcatta tgactcctgt
     7561 ttcacgtcta tcagatatat gcagtttgtg aacgtcaggg cgcagagatc cccgggccgt
     7621 atgcccgttt atttctggcg acattcttta tatacacttc atccttcaag ccgcctctgc
     7681 cttggctgcg ttcgctcccc cgaatcactt acctgagtaa gctcatcggg attcgctcac
     7741 ttgccgcctt gatgcaactt gaatgatttt gtgtatagat tgccgggcgc attgcgctta
     7801 cccggcttac agaacaaaaa gattaaaacg tggtgggcgt atgggcgctg ataattcggc
     7861 aaatacctgc cgacgtatta ctgaaactgt gcgggatgcc ggtattaatg gcataacttt
     7921 gacccgcgac gaggtggtaa tcctgaccat taatcgtcag aacaatttca ccttccagta
     7981 ctgtgcctat ttcctcaccc tgatgcttaa ttctttcccc agtggttgtg cccggctggt
     8041 acgtttcaaa gatcatcgcc agcgtgcgat tcgggttacc gttatgaacc agcttcattg
     8101 acacaccctg actgcccatc tcaattaagt cgtcctgatt aatgacgacc tgcggctcat
     8161 caggtttttc cggctcggaa aagaattccg agagtgacag accatacacc ttcagcagct
     8221 tttgcagcgt actgatggca gggctgactt tatcttgttc tatcgtactg atagcactgt
     8281 gagtcagccc ggagagttcg gcggcacgac gttgtgaaag cccctgctgc tggcggattt
     8341 ccgacaagcg ttttcctggc gccagtccct catcactcat atttgcattt ccttaaactg
     8401 tagtggtcag agtcgctgtt tttcagcgat atggtgctga caagcggtga taaagccctc
     8461 gaacaatata cgcgaaagag cgtactcgct actgttccat tccgggtgcc actgtacgcc
     8521 cagcgcaaaa ggatgattga tgacgctaac cgcctcaact aagccatccg gcgagcgagc
     8581 ttcaacacgc aaccgtgggc taacgacctt cgccccttgt ccatgtagag agtttaccca
     8641 aaagttgcta cattcaggta acaacgcaga cagtaatccc ccctcttcaa cctgaacttc
     8701 atgcgacggt gcatattgct gttccaccgg cagttcggat cttcccgatg ttccagcaat
     8761 tcaggctgtt cgcacagctt gcgatgcaac gaaccaccgg ttgccaccac cagttcttgt
     8821 aaaccccggc agatggcgaa aatggggatg cgcctttcga gtgcggcatt aattatcgcc
     8881 atgctcagaa gatcacgccc gggatcggcg tcaggctcat cgccgttttc accatatagg
     8941 tgcggctgca cattgctggg actaccagga agataaatgc catcgagttt cggcaaaagt
     9001 tgttcaagta acgacggttc cgccagcgca tgtggtagcg caattggcaa gccgcctgcg
     9061 tggatgatgg cattcaggta cttttcttgc agagtctggg tcgcatgacc cttaagcctg
     9121 ttcctgcaca ttacgacacc gataaccgga ttgttcatta tatttttcat gctcaatctc
     9181 acaaagtgga ctaaattatc gccattactg cgctttaaat gacctttatg ttcaatattt
     9241 tttcaatcta gcagtgggtt ttcatttttg caaactaaat ttaacatttg gcaaacattt
     9301 agtttgcata cagattcgaa tggtggtcat tatattttac gctttgataa cgagcggaaa
     9361 acaaaccaaa ggcgaagaat catggaaacc aatatcgttg aagtagagaa ctttgttcag
     9421 cagccagaag agaggcgggg tagcgccttt acgcaggaag tgaaacgcta cctggagcgc
     9481 tacccgaata cgcaatatgt tgatgtttta cttactgatt tgaatggttg cttccgtgga
     9541 aaacgtatcc ctgtttcaag cctgaagaag ttggagaaag ggtgttattt cccggcctcg
     9601 gtgtttgcaa tggatattct gggcaacgta gtagaagaag cgggtctggg tcaggaaatg
     9661 ggcgagccgg atcgtacttg tgttcctgtt ctcggttcct taaccccttc tgccgccgat
     9721 ccagagttta tcggtcagat gctcctgacc atggtcgatg aagatggcgc tccctttgac
     9781 gttgagccgc ggaacgttct taaccgcctg tggcagcagc tacgccagcg cggattgttc
     9841 ccggttgtag cggtagagct ggagttctat ttactggatc gtcagcgcga cgctgaaggg
     9901 tatctgcaac cgccctgcgc gcccggcacc gataaccgca atacacaaag ccaggtttac
     9961 tccgttgata acctcaacca cttcgccgac gtgctcaatg atattgatga actggcgcag
    10021 ttacagttaa ttcccgccga cggtgcggtc gccgaagcct cgccgggtca gtttgaaatc
    10081 aacctttacc ataccgataa cgtgctggaa gcctgcgatg atgcgctggc gctaaaactc
    10141 ctggtgcgtc tgatggcaga aaagcataag atgcactcca cttttatggc gaagccgtat
    10201 gaagagcacg cgggcagcgg gatgcatatc catatcagta tgcaaaataa tcgtggcgag
    10261 aatgtgcttt ctgacacaga aggcgaagat tcgccgctgc tgaaaaagat gctcgccggg
    10321 atgattgacc tgatgccgtc gtcgatggcg ttgctggcac taaacgtgaa ctcgtatcgc
    10381 cgcttccagc cgggaatgta tgtgccgacg caggcgtcgt ggggccataa caaccgcacc
    10441 gtcgccctgc gtattccgtg cggcgaccgt cataatcacc gcgtggaata tcgcgtggcg
    10501 ggtgccgatg ccaacccata tctggtgatg gcagcgattt ttgccggtat tttgcatggc
    10561 cttgataacg agctgccgtt gcaggaagaa gtcgaaggca acgggctgga acaggaaggc
    10621 ttacccttcc cgattcgcca gagcgatgcc ctgggtgagt ttatcgagaa tgatcacctg
    10681 cgccgctatt taggcgaacg gttttgccat gtgtatcacg cctgtaaaaa tgatgagctg
    10741 ttgcagtttg agcgcctcat cacagaaaca gaaattgagt ggatgttgaa aaacgcatag
    10801 taccccttgc ggggttgttt catcgacctg agcggagcca ggcctgacat ttgctggtaa
    10861 tccagacatt tcccggatgt cgcgttatgg agcgcaggcg gcaacgggct tccgttaacg
    10921 attaagactg tgacgaggaa atgagatgat gccgatgatt aaatccccgc atggcgaggg
    10981 aggctgcgta tgcgcccctc ctgctactga ctggactccg tcccctttgc ttcccttgct
    11041 aaacaggttt gatttcaggt cgacacgacc gcaaacctta ttacgcaggg ggaggcagca
    11101 attatggcta ttaattcacc actgaatatt gctgcgcaac ccggcaaaac ccgtctgcga
    11161 aaatcactga aattgtggca ggtggtgatg atgggtctgg cctatctcac gccgatgacc
    11221 gtatttgata cttttggtat tgtctccggc attagcgacg gtcacgttcc ggcgtcctat
    11281 ttgctggcgc tggcgggcgt gctgtttacc gctatcagct acggcaaact ggttcgccag
    11341 tttccggagg ccggttcggc ctatacctac gcgcaaaagt cgattaaccc gcacgtcgga
    11401 tttatggtcg gctggtcatc gctgctggat tatctctttt tgccgatgat caacgtcttg
    11461 ttggcgaaaa tctatctctc cgccctcttc ccggaagtgc cgccgtgggt gtgggtagta
    11521 accttcgtcg ccattttaac cgccgcgaat ctgaagagca tcaacctggt cgctaacttc
    11581 aataccctgt ttgtactggt gcaaatctcc atcatggtgg tgtttatctt cctggtagtt
    11641 cagggactgc ataaaggaga aggcgttggc accgtctggt cacttcagcc gtttatcagc
    11701 gagaacgcgc acctgatccc gattattacc ggggcgacga ttgtctgttt ctccttcctc
    11761 ggtttcgatg cggtgaccac gctttcggaa gagacgccgg acgccgcacg cgtgatcccg
    11821 aaagccatct tcctgacggc ggtctacggt ggcgttatct ttatcgcggc gtcgttcttt
    11881 atgcagctgt tctttcccga tatcagccgc tttaaagatc cggatgccgc actgcctgaa
    11941 attgcgctgt acgtcggcgg caagctcttc cagtcgattt tcctctgcac cacgtttgtg
    12001 aacacgttag cctctggcct ggcttcacat gccagcgtgt cgcgtctgct gtatgtgatg
    12061 gggcgtgaca atgtgtttcc ggagcgcgtg tttggctatg tgcacccaaa atggcggact
    12121 ccggcactca acgtcattat ggtcgggatt gtcgcgttgt cggcgctgtt cttcgattta
    12181 gttaccgcca cagcgttaat taacttcggt gctctggtgg cgtttacctt cgtgaatctg
    12241 tcggtgttta atcatttctg gcggcgtaaa ggaatgaata aaagctggaa ggatcacttc
    12301 cactatttgc tgatgccgct ggttggcgcg ctgacggtgg gtgtgctgtg ggttaacctc
    12361 gagtcaacgt cactgacact cggtctggta tgggcttcgt taggcggcgc atatttatgg
    12421 tatctgatcc gccgctatcg caaagtgccg ttgtatgatg gtgacagaac gccggtgagt
    12481 gaaacgtaat agtcggatgc gcggcgcatt atcctgccgg agggtaatgc accgcgccat
    12541 taactataaa aagatgtatg acccggatca cgagtgctat catccgccct tatgcttagc
    12601 gcattaaccc caggggcaaa taatgaacca cgatatcccg ctaaaatatt ttgatattgc
    12661 cgatgagtac gcgaccgaat gcgcagagcc tgtcgcagac gctgaacgca caccgctggc
    12721 ccactacttc cagttactgc tcacccgttt gatgaacaat gaagagatca gcgaagaagc
    12781 ccaacatgaa atggctgctg aagcggggat taatcccgta cgcattgatg agatcgcaga
    12841 gtttttgaat caatggggta atgagtaatt atttaattgc agacgatcgg tcagtatcgt
    12901 tgtccggata aagcgttcac gccgcatccg gctaacaatg acacgcactg cagcgtgctt
    12961 taatgggttt ctcacgatcg taccgctctg ctcctcgcta agttgttctg tgagttatag
    13021 ttatagagga agcacgggta cgaatgttga acagatggcg acgccacctg ttcaacgacc
    13081 aaccacacgg ccctcattac gacccctgaa cacaaacggt aatggcaaat gtcattaaat
    13141 attagtaaga tagcctcttt acataaaatc ccttaatatt atgcgccagg tattatcgtc
    13201 tcttttggtg attgctggac ttgtgagtgg tcaggcaatc gccgcgcctg aatccccccc
    13261 gcatgctgat atccgcgaca gcggttttgt ctattgcgtc agcgggcaag tcaacacctt
    13321 taacccatcc aaagcgagca gtgggttaat tgtcgatacc cttgccgccc agttttatga
    13381 tcgactgctg gatgtcgatc cctataccta tcgcctgatg ccggaacttg ccgaaagctg
    13441 ggaagtactc gacaacggcg cgacctatcg cttccacctg cgtcgcgatg ttccgtttca
    13501 aaaaaccgac tggtttactc ccactcgtaa aatgaatgcc gacgatgtgg tgtttacctt
    13561 ccagcgaatt tttgaccgca acaacccgtg gcataacgtc aacggcagca acttccccta
    13621 cttcgacagc ctgcaatttg ccgataacgt gaaaagcgtc cgcaaactgg ataatcatac
    13681 cgttgagttc cgactcgccc agccggatgc ttcttttttg tggcacctcg caacccatta
    13741 tgcttcggtc atgtcggcag aatatgcccg gaagttagag aaagaagatc gccaggagca
    13801 actcgaccgt caaccggtcg gcaccggtcc gtatcagttg tcggaatacc gcgccgggca
    13861 atttattcgc ctacaacgtc atgatgactt ctggcgcggt aaaccgttaa tgccgcaggt
    13921 agtggtggat ttaggctccg gcggcaccgg acgtctgtcg aaactcctga ccggggaatg
    13981 cgacgttctg gcctggcctg ctgccagcca gctatccatt ttgcgtgacg acccgcgctt
    14041 gcgtttaacg ctgcgtcctg ggatgaacgt cgcctatctg gcatttaaca ccgccaaacc
    14101 gccgctaaat aatcccgctg tccgccatgc actggcactg gcgattaata accagcgcct
    14161 gatgcaatcc atctattatg gtacggctga aacggcggcc tctattttac cgcgcgcctc
    14221 gtgggcctat gacaacgagg ctaaaattac tgaatacaat ccggcgaaat cgcgcgaaca
    14281 gttgaaggcg ttggggctgg aaaacttaac gctgaaactg tgggtgccca cacgttcgca
    14341 ggcgtggaac cccagtccac tgaaaactgc cgaactgatt caggcggata tggcgcaggt
    14401 tggcgtaaaa gtggtgattg tgccggtaga aggtcgcttt caggaggcgc ggttgatgga
    14461 tatgagccat gatctgacgt tatccggttg ggcgacggac agtaacgacc cggacagttt
    14521 cttccgtcct ttactgagct gcgcggcaat tcattcacag accaacctcg cccactggtg
    14581 cgatccgaaa ttcgacagcg tgttgcgtaa ggcgctctcc tcgcagcagc tggcggcgcg
    14641 tattgaagcc tatgacgaag cgcagagtat tctggcgcag gaattgccca ttttgccgct
    14701 ggcgtcgtca ttgcgtttgc aggcctatcg gtacgatatc aaaggtctgg tacttagccc
    14761 gtttggtaac gcctcctttg ctggggtgta tcgcgagaaa caggatgagg tgaaaaaacc
    14821 atgattatct tcaccttacg ccgcattttg ttattgattg tcaccttgtt cctgctgacc
    14881 ttcgttggct tcagcttgag ctatttcacc cctcatgcgc cgttacaagg cgcgtcactg
    14941 tggaatgcct gggtgttctg gtttaacggc ctgatccact gggattttgg tgtttccagc
    15001 attaacggtc aaccgattgc cgaacagtta aaagaggtct tcccggcgac gatggaactg
    15061 tgcatcctcg ccttcggttt tgcgctgatt gttggcatcc ccgtggggat gattgccggg
    15121 attacgcgcc ataagtggca ggataacttg atcaacgcca tcgccttact gggcttttca
    15181 atcccggtgt tctggctggc gcttctgttg acgctgtttt gttcactcac gctaggttgg
    15241 ttgcccgttt cagggcgttt cgatctgctc tacgaagtga aaccgattac cggttttgcg
    15301 ttgattgatg cctggctttc ggactcacca tggcgggatg aaatgatcat gagcgcaatc
    15361 cgccatatga tattgcccgt gatcaccctg tcggttgcgc caacaactga agtgatccgc
    15421 ctgatgcgta tcagcactat cgaagtgtat gaccagaact atgtaaaagc ggcggcgacc
    15481 cgcggtttgt cgcgctttac tattttgcgt cgccacgttc tgcataacgc gttaccgccg
    15541 gttattcctc gcctgggctt acagttttcc accatgctga cgctggcgat gatcaccgaa
    15601 atggttttta gctggccggg tttagggcgc tggttaatta acgccatccg ccagcaggat
    15661 tacgcagcca tttccgccgg agtgatggtg tgtggctcac tggtcattat tgttaacgtg
    15721 atttctgata ttttgggtgc catggctaac cctctgaaac ataaggaatg gtatgcctta
    15781 cgatagcgta tacagcgaaa agcgcccgcc gggcacgctg cgtaccgcct ggcgcaaatt
    15841 ttatagtgac gcctctgcga tggtcggcct gtacggctgc gcggggctgg ctgtactgtg
    15901 tatttttggc ggctggtttg cgccttacgg catcgaccag caatttctcg gttatcaatt
    15961 attgccgcca tcatggtcgc gctatggcga agtttctttc ttcctgggga ctgacgacct
    16021 cggacgcgat gttttaagcc gtttactgag cggagctgcg ccaaccgtgg gtggcgcatt
    16081 tgtggtgacg cttgccgcga cgatctgtgg cctagtactg ggcaccttcg ccggggcgac
    16141 acacggcctc cgctcagcgg tgcttaacca tattctggat accttactgg cgatcccttc
    16201 gctgctgttg gcaattatcg ttgtagcgtt tgccggaccg agtttgtccc acgctatgtt
    16261 tgctgtctgg ctggcattgc tgccgcgtat ggtacgttcg atttacagca tggtgcatga
    16321 cgaactggaa aaagagtacg ttatcgccgc ccgtctggat ggcgcatcaa cgctgaatat
    16381 tctctggttt gctgtgatgc caaacatcac cgccgggctg gtcaccgaga tcacccgcgc
    16441 actgtcgatg gcaattctcg atatcgccgc gctgggcttt ctcgatctcg gcgcacaact
    16501 cccctcgcct gaatggggag cgatgctcgg tgatgcgctg gaactgattt atgtcgcccc
    16561 gtggactgtc atgctgccag gtgcggcaat tatgattagc gtgttgttgg ttaacctcct
    16621 tggcgatggc gttcgtcgtg cgattattgc gggggtggaa taatgccatt actcgatatt
    16681 cgtaacctga ccattgaatt taaaaccggt gatgagtggg ttaaagccgt cgaccgggta
    16741 agtatgacct taaccgaagg tgaaatccgc ggtcttgttg gtgaatccgg ttccggcaag
    16801 agtttgattg cgaaagcgat ttgtggggtg aataaagata actggcgtgt tattgctgac
    16861 cgtatgcgtt ttgatgatat cgatttgctg cgtctctccg cacgcgaacg gcgcaaactg
    16921 gttggccata acgtgtcgat gattttccag gaaccgcagt cgtgtcttga cccttcagaa
    16981 cgtgtgggtc gccagttgat gcaaaacatc ccagcctgga cctataaagg ccgttggtgg
    17041 cagcgttttg gctggcgcaa acgccgtgcc attgaactgc tgcaccgcgt ggggattaaa
    17101 gatcacaaag atgcgatgcg cagttttccc tatgagttga ccgaaggtga atgtcagaaa
    17161 gtgatgatag ccattgcact ggcgaatcaa ccgcgtctgc tgattgctga cgaaccgacc
    17221 aactcaatgg agccaacaac ccaggcgcaa atctttcgcc tgctgacgcg tctcaaccaa
    17281 aacagcaata ccactatttt gcttatcagc catgacttac aaatgcttag ccaatgggcg
    17341 gataaaatta acgtgcttta ctgcggtcaa acagtggaaa ccgcgccgag taaggagttg
    17401 gtgacgatgc cacatcatcc ttatacccag gcgctgatcc gcgcgatacc agacttcggc
    17461 agcgcgatgc cgcataaaag tcgcctcaat acgctgcccg gcgctatccc actgctggaa
    17521 cagttaccga ttggttgtcg tctggggcca cgttgcccgt atgcacaacg agaatgcatt
    17581 gtgacgccac gtttgacggg ggcgaaaaat catctctatg cctgtcattt cccgctgaac
    17641 atggagaaag agtgagatga tcgaaacgct gcttgaagtg cgtaatttaa gtaaaacgtt
    17701 ccgctaccgg accggctggt ttcgccgtca gaccgtagaa gcggtaaaac ccttgagctt
    17761 tacgctacgt gaaggccaga cactggcgat tattggcgag aatggttcgg gtaaatccac
    17821 gctggcaaaa atgctggcgg gaatgataga gcctaccagc ggcgagttat tgattgacga
    17881 tcatccactg cattttggcg attattcctt ccgcagtcag cgtattcgca tgatttttca
    17941 ggatccttcg acctcgttga atccccgtca acgtatctcg caaattctgg attttccact
    18001 gcgcctgaac accgacctgg aaccggaaca gcgtcgcaaa cagattattg aaacgatgcg
    18061 tatggttggg ctgctaccgg atcacgtcag ttactatccg catatgttgg cacccggaca
    18121 aaaacagcgt ctgggtctgg cgcgcgcgct gatattgcgc ccaaaagtca ttattgccga
    18181 tgaagcactc gcttcactgg atatgtcgat gcgttcgcag ttgattaatc tgatgctgga
    18241 gttacaggaa aaacagggca tttcgtatat ttatgttacc cagcatatcg gaatgatgaa
    18301 gcacattagc gaccaggtgc tggtgatgca tcagggcgag gttgtcgagc gaggcagcac
    18361 cgcggatgtg ctggcatcgc cgctgcatga actcaccaaa cggctgattg ccgggcactt
    18421 tggcgaagca ttgacagcgg atgcgtggcg taaagatcgc taattttctg aatcctcctt
    18481 ccagattatc cacctcattc tgacaagaga ttaaatcttg tcagaatgag gtgatggata
    18541 aaataaaatc aaatgcgcgt gatttaagac gcaatctcac tttgcaggaa cgaaagctct
    18601 ggcgatatct tcgcagccga cgttttggtg atttcaaatt tcgccgtcaa catccggtgg
    18661 ggagctacat tctcgatttt gcttgctgct cggcgcgcgt agtcgttgag ctggatggtg
    18721 ggcagcatga tttggcagtt gcctatgata ccaggcgcac tagctggctt gagtcgcagg
    18781 gctggaccgt gctgcgtttc tggaataacg agattgattg taatgaggag gcggtgctgg
    18841 agattattct gcaggaactg aaccgccgat caccctcacc ctgaaagggc gagggggccg
    18901 accgagccga atagctgttg tggtgaaaac atggagactg tgctggagaa tattcggcaa
    18961 ggtctgaacc atcccagcca tcgccataaa agggttaggg gctgtatgag cctgtttgtt
    19021 gctggggtaa caatatttgc acaatatggt cccctcgccc ctctggggag agggttagtg
    19081 taaggggaaa agcgcccacc ctgccgcagc ctgctccggt cggacctagc aactatagct
    19141 actcacagcc aggttgatta taataaccat ttatctgttc gtactgttta ctaaaacgac
    19201 gaatcgcctg attttcaggc acaacaagca tcaacaataa ggattaaagc tatgggtttt
    19261 ctttccggta agcgcattct ggtaaccggt gttgccagca aactatccat cgcctacggt
    19321 atcgctcagg cgatgcaccg cgaaggagct gaactggcat tcacctacca gaacgacaaa
    19381 ctgaaaggcc gcgtagaaga atttgccgct caattgggtt ctgacatcgt tctgcagtgc
    19441 gatgttgcag aagatgccag catcgacacc atgttcgctg aactggggaa agtttggccg
    19501 aaatttgacg gtttcgtaca ctctattggt tttgcacctg gcgatcagct ggatggtgac
    19561 tatgttaacg ccgttacccg tgaaggcttc aaaattgccc acgacatcag ctcctacagc
    19621 ttcgttgcaa tggcaaaagc ttgccgctcc atgctgaatc cgggttctgc cctgctgacc
    19681 ctttcctacc ttggcgctga gcgcgctatc ccgaactaca acgttatggg tctggcaaaa
    19741 gcgtctctgg aagcgaacgt gcgctatatg gcgaacgcga tgggtccgga aggtgtgcgt
    19801 gttaacgcca tctctgctgg tccgatccgt actctggcgg cttccggtat caaagacttc
    19861 cgcaaaatgc tggctcattg cgaagccgtt accccgattc gccgtaccgt tactattgaa
    19921 gatgtgggta actccgcggc attcctgtgc tccgatctct ctgccggtat ctccggtgaa
    19981 gtggtccacg ttgacggcgg tttcagcatc gctgcaatga acgaactcga attgaaataa
    20041 tcattctgtt ggtaaatatt gggcggcgtt ctgccgcccg ttatctctgt tatacctttc
    20101 tgatatttgt tatcgccgat ccgtctttct ccccttcccg ccttgcgtca ggataacgat
    20161 ttcctttacg accaaggagc gcccatggaa caacgccaca tcaccggcaa aagccactgg
    20221 tatcatgaaa cgcaatccag tactgcggag tatgacgttc tgcctctggt cccggaagcc
    20281 gcaaaggtca gcgatccctt tctgctcgac gtgatccttg atgaagaaac gctagctccc
    20341 ttcctttcat ggctggtccc tgcgcgcgtt cttgcagtgg aattgttccc tgaccagctt
    20401 accgtgaccc gttcacagac cttcaccgct tatgaacgct tgtctacggc cctgacggtt
    20461 gctcaggttt gcggcgtcca gcggttatgt aactactatt cggcgcgact tacgccgctc
    20521 cccgggcctg attcctctag ggaaagcaat cataggttgg cacaaatcac gcaatatgcc
    20581 cgccaactgg ctagctcgcc ttctattatc gacaaccgat cgcgccagca tctgaatgac
    20641 gtcggtctta ctgccaggga ctgtgtaatc attaaccaaa tcattggttt tattggcttt
    20701 caggcgcgga ccattgcgac atttcaggct tatctcgggc acccggtacg ctggttaccc
    20761 ggtctggaaa tacaaaacta cgccgacgcg tcactgtttg ctgatgaatc aatacgctgg
    20821 cgaagcagct atgaggtgga aaaactacct gaagagtaca caaaaagttc aacagcagaa
    20881 ctttgccaac tggccgaaac actctctctc caccctattt cactttccct tctcgaaagg
    20941 ttgttaaaca gtacacgggt taatacacag ccggataata agcttgcggc gttgttatgc
    21001 gcgcggataa atggcagtcc tgcttgtttt gccgcctgta tggattcatc aaatgaatat
    21061 aaaaaaatca gcccccttct gcgcaagggc gaaaatgaaa ttaaccaatg ggctgaccgt
    21121 cattctgttg agcacgctac cgttcaggcg atacaatggc tgacccgagc acccgatcgc
    21181 tttagcaccg cccagttcag ccctttactc gaacacgaac aatcatcaac gcagattatt
    21241 aatctgctgg tatggagcgg gctgtgtggc tggataaatc gcttaaaaat cgcgttgggt
    21301 gagacatatt aaccttgccg cgtcagacag attcgcgtaa aactgtcagc cgctctaatg
    21361 gccaccaaaa tagacaatta tgtttcagga caacccgctg ctagcgcagc ttaaacagca
    21421 actgcattcc cagacgccac gcgctgaagg ggtggtaaaa gccacagaaa aaggctttgg
    21481 cttcctggaa gtcgacgcgc aaaaaagtta tttcattccg ccgccgcaga tgaaaaaagt
    21541 catgcatggc gaccgaatta tcgcggtgat ccacagtgaa aaagaacgtg aatccgcaga
    21601 gccagaagaa ctggttgaac cgttcctgac tcgtttcgtg ggtaaagttc agggcaaaaa
    21661 tgaccgtctg gccatcgttc ctgatcatcc actcttaaaa gacgccattc cttgccgcgc
    21721 agcccgtggc ctgaaccacg agtttaaaga aggcgactgg gcggttgccg aaatgcgccg
    21781 tcatccgctg aaaggcgatc gttctttcta tgctgaattg acacaataca tcacttttgg
    21841 tgacgaccac tttgtaccgt ggtgggttac acttgcgcgc cataatctgg aaaaagaagc
    21901 accagacggc gtcgctaccg aaatgctcga tgaaggtctg gttcgtgaag atctgaccgc
    21961 gctggatttt gtcaccatcg acagtgccag cacagaagat atggatgacg cccttttcgc
    22021 taaggcgttg ccggatgaca aacttcagct gattgtggcg attgccgatc caaccgcgtg
    22081 gattgctgaa ggcagcaagc tggacaaagc cgcgaaaatt cgcgcattca ccaactatct
    22141 gcctggcttc aacatcccta tgctgcctcg cgagctttct gacgatctct gctcactgcg
    22201 cgccaatgaa gtccgcccgg tactggcatg ccgcatgacg ctctccgctg atggcgccat
    22261 tgaagataat atcgaattct ttgccgccac catcgaatcc aaagcaaagc tggtgtatga
    22321 ccaggtttct gactggctgg aaaataccgg tgactggcag cctgaaagtg aagcaattgc
    22381 cgaacaagtc cgtttgctag cgcaaatttg ccaacgccgc ggcgagtggc gtcataacca
    22441 cgcactggtg tttaaagatc gcccggatta ccgctttatt ctcggtgaaa aaggtgaagt
    22501 gctggatatc gtcgccgagc ctcgtcgcat tgccaaccgt atcgtcgaag aagcgatgat
    22561 tgccgctaac atttgtgcgg cccgcgtact gcgcgataag ctcggttttg gcatctataa
    22621 cgtgcatatg ggctttgatc cggcgaatgc cgacgcgctg gcagcgttgc tgaaaacgca
    22681 cggtctgcat gtcgatgccg aagaagtgct cacgctggac ggtttctgca aactgcgtcg
    22741 tgaactggac gcgcaaccaa ctggtttcct cgacagccgc attcgtcgct tccagtcatt
    22801 tgctgaaatt agcactgaac ccggtcctca ctttggcctc ggtctggaag catacgccac
    22861 ctggacttcg ccgatccgta aatatggcga catgatcaac caccgtctgc tgaaagcggt
    22921 tatcaaaggc gaaactgcga cgcgcccaca ggatgaaatc actgtccaaa tggccgagcg
    22981 tcgccgtctc aaccggatgg cagaacgtga tgttggtgac tggttatacg cacgcttcct
    23041 gaaagacaaa gccgggaccg acacccgttt cgcagcggaa attgtcgata tcagccgtgg
    23101 cggcatgcgt gtgcgtttgg ttgataacgg cgctatcgcc tttattccgg cacctttctt
    23161 acacgctatg cgcgatgaac tggtttgcag ccaggaaaac ggcactgtac aaattaaagg
    23221 tgaaacggtt tacaaagtaa ctgacgttat tgacgtcacc attgccgaag tccgcatgga
    23281 aacccgcagc attattgcgc gcccggtcgc gtaatctcct ttcacggcct attcctcatg
    23341 gatgggccgt ttatttcccc gctctacctt cgttatatcc aggcagattt tttaactgac
    23401 tttcgtttga aaactggcgt ttttccaaaa ctggattaca aataaatata taaaaaaaca
    23461 atgcgtttag ccgccgttaa tttcatgtaa gtca
//
LOCUS       DAJVUK010000052        23029 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.052, whole genome shotgun sequence.
ACCESSION   DAJVUK010000052 DAJVUK010000000
VERSION     DAJVUK010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23029)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23029)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23029
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.052"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..561)
                     /locus_tag="OQQ57_001909"
     CDS             complement(<1..561)
                     /locus_tag="OQQ57_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1956695.1"
                     /translation="MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGG"
     gene            complement(780..1757)
                     /gene="epmA"
                     /locus_tag="OQQ57_001910"
     CDS             complement(780..1757)
                     /gene="epmA"
                     /locus_tag="OQQ57_001910"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HCS1956696.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLNLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2082..3890
                     /gene="frdA"
                     /locus_tag="OQQ57_001911"
     CDS             2082..3890
                     /gene="frdA"
                     /locus_tag="OQQ57_001911"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HCS1956697.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3883..4617
                     /gene="frdB"
                     /locus_tag="OQQ57_001912"
     CDS             3883..4617
                     /gene="frdB"
                     /locus_tag="OQQ57_001912"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HCS1956698.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4628..5023
                     /gene="frdC"
                     /locus_tag="OQQ57_001913"
     CDS             4628..5023
                     /gene="frdC"
                     /locus_tag="OQQ57_001913"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HCS1956699.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5034..5393
                     /gene="frdD"
                     /locus_tag="OQQ57_001914"
     CDS             5034..5393
                     /gene="frdD"
                     /locus_tag="OQQ57_001914"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HCS1956700.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5456..6589
                     /locus_tag="OQQ57_001915"
     CDS             5456..6589
                     /locus_tag="OQQ57_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HCS1956701.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6678..7211
                     /gene="blc"
                     /locus_tag="OQQ57_001916"
     CDS             6678..7211
                     /gene="blc"
                     /locus_tag="OQQ57_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin Blc"
                     /protein_id="HCS1956702.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGLFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(7208..7525)
                     /gene="sugE"
                     /locus_tag="OQQ57_001917"
     CDS             complement(7208..7525)
                     /gene="sugE"
                     /locus_tag="OQQ57_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HCS1956703.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7707..7853)
                     /gene="ecnB"
                     /locus_tag="OQQ57_001918"
     CDS             complement(7707..7853)
                     /gene="ecnB"
                     /locus_tag="OQQ57_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HCS1956704.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7964..8089)
                     /gene="ecnA"
                     /locus_tag="OQQ57_001919"
     CDS             complement(7964..8089)
                     /gene="ecnA"
                     /locus_tag="OQQ57_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HCS1956705.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8141..8707)
                     /gene="efp"
                     /locus_tag="OQQ57_001920"
     CDS             complement(8141..8707)
                     /gene="efp"
                     /locus_tag="OQQ57_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HCS1956706.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8749..9798
                     /gene="epmB"
                     /locus_tag="OQQ57_001921"
     CDS             8749..9798
                     /gene="epmB"
                     /locus_tag="OQQ57_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HCS1956707.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10172..11041
                     /locus_tag="OQQ57_001922"
     CDS             10172..11041
                     /locus_tag="OQQ57_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjeJ family protein"
                     /protein_id="HCS1956708.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(11244..11597)
                     /locus_tag="OQQ57_001923"
     CDS             complement(11244..11597)
                     /locus_tag="OQQ57_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HCS1956709.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(11735..13381)
                     /gene="groL"
                     /locus_tag="OQQ57_001924"
     CDS             complement(11735..13381)
                     /gene="groL"
                     /locus_tag="OQQ57_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HCS1956710.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            complement(13425..13718)
                     /locus_tag="OQQ57_001925"
     CDS             complement(13425..13718)
                     /locus_tag="OQQ57_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HCS1956711.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13994..15250
                     /gene="yjeH"
                     /locus_tag="OQQ57_001926"
     CDS             13994..15250
                     /gene="yjeH"
                     /locus_tag="OQQ57_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HCS1956712.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPCAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRSASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKS
                     LYALIVLAGLWLLLPKRKTPENGIIT"
     gene            complement(15266..15742)
                     /gene="fxsA"
                     /locus_tag="OQQ57_001927"
     CDS             complement(15266..15742)
                     /gene="fxsA"
                     /locus_tag="OQQ57_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418564.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HCS1956713.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD"
     gene            16079..17515
                     /gene="aspA"
                     /locus_tag="OQQ57_001928"
     CDS             16079..17515
                     /gene="aspA"
                     /locus_tag="OQQ57_001928"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HCS1956714.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            17633..18934
                     /gene="dcuA"
                     /locus_tag="OQQ57_001929"
     CDS             17633..18934
                     /gene="dcuA"
                     /locus_tag="OQQ57_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuA"
                     /protein_id="HCS1956715.1"
                     /translation="MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            19050..19388
                     /gene="cutA"
                     /locus_tag="OQQ57_001930"
     CDS             19050..19388
                     /gene="cutA"
                     /locus_tag="OQQ57_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HCS1956716.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            19364..21061
                     /gene="dsbD"
                     /locus_tag="OQQ57_001931"
     CDS             19364..21061
                     /gene="dsbD"
                     /locus_tag="OQQ57_001931"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HCS1956717.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNHALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA
                     NITANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            21098..21673
                     /locus_tag="OQQ57_001932"
     CDS             21098..21673
                     /locus_tag="OQQ57_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1956718.1"
                     /translation="MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKQLARYQALSECVKNNRYPGCLFIA
                     ACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            21780..21855
                     /locus_tag="OQQ57_001933"
     tRNA            21780..21855
                     /locus_tag="OQQ57_001933"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21813..21815,aa:Phe,seq:gaa)
     gene            22053..>23029
                     /locus_tag="OQQ57_001934"
     CDS             22053..>23029
                     /locus_tag="OQQ57_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1956719.1"
                     /translation="MALTDAKIRAAKPTDKAYKLTDGTGMFLLVHPNGSRYWRLRYRI
                     LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIA
                     RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEI
                     ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGS
                     YKGQTVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGS
                     KMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNAS"
BASE COUNT         5738 a         5942 c         5699 g         5650 t
ORIGIN      
        1 cccaccattt aataacaaaa tagtaatgct tactaacagc aatactaaat tcagacacat
       61 tactgcaata ccgcccaccg cagtaatgcg ggcaatttta ttaatcccct ttgaagcaac
      121 gacggtgacc agaatcatcc atgctactgc cagcagacca accacctgcg taggctccag
      181 tccggcaata cgccagtgct gggtcatgtc gctaccatag aggaatgttg agaacggtac
      241 ccaaactttc gcggaggtac tcaccatcca gatgatataa gaggaaaacc acataaacgt
      301 accaatgaag gcaaaacgtg gtccgacact attattcatc caggaataga taccaccttc
      361 ttctttgcga taagcagctc ccatttcagc catcattaag gcgaatggaa taaagaataa
      421 caatgcagaa aatatataaa agggaatcgc actataaccc attaagtaat aagccgatgg
      481 gctattggca aatccaaata cggaagtaaa gatcatcaat atgagtccta tcagactcat
      541 cttttttatc gtgtgaggca tgaaaccatc cttcatttca gcgcgtgtat aacacgtgcc
      601 cactgaactg cactgcgcaa cattgagcag gcagcgtaaa aaccaataca gaattgatac
      661 ccggatgata tcaaatatcc agtcttaaat tgtggccttt aacggaaaaa tgaaaacata
      721 tgctacagaa tggcgcttat cacgccattc ttcgctgtta attcagtaat ttttcagaat
      781 tatgcccggt caacgctaaa ggcgatgact tcagccagtg tctccgcgcc cagcgccaac
      841 atcaccagac gatcaacacc taatgccacg ccggaacagt caggcatacc gactttcaag
      901 gcttcaatca gattctggtc aatggggtgc tgcggcaaac cgcgcgccgc gcgcttacgg
      961 ttatcttgtt caaagcgttg ttgctgctca cgggcatccg ttaattcatg gaaaccattc
     1021 gccagctcaa tacctttata ataaacctca aagcgttcag cgacccgatg atcttcggta
     1081 ctgatttgcg ccagtgatgc ctggctggct ggaaagtggt acacaaaggt cggtttttct
     1141 ttgccaatat ttggctctac gccaaaggta aacagcaatt gtagcaacgt gtcgcggtct
     1201 tcttcggtat cagcaacgtt actcaaattc agtttcgctg cgacttcccg cagttgcgtt
     1261 ttgtcggcag agagcgggtc aatttccaga taacgcaaga aagcttgttg ataagaaagg
     1321 ctttctgctg ccgggcagtc cagcacctgt tgtaagagat cgtccacctc gttcatcaac
     1381 cggtacatat catagtgcgg tcgataccac tcaagcatag tgaactcagg gttgtgataa
     1441 cgccccatct cttcattacg gaagctgcgg cacagctgga ataccggccc acaaccggca
     1501 accagcaggc gtttcatatg gtattccggg ctggtcatta accagagatt catcccctgc
     1561 gaatgcccgg ggccaacgaa acgtgtctca aacgggacca aatgaatatc ggttaccgtc
     1621 gcctggctca tacaaggcgt ctccacctcc agcactccac gatcagcaaa gaaacgacgg
     1681 atctccgcca taatcgccgc gcgttttaat aagttaggaa tggatgcgct cggctgccag
     1741 gatgccgttt cgctcatagt taaatctcca gtttttgaca agggcacgaa gtctactcgc
     1801 aacgcgacgg cgagacaaat tttacgcagg aatcaaacag cggtgggcag tgactaaaaa
     1861 aagcacgatc tgatggttta gtaattaaat taatcatctt cagtgataat ttagccctct
     1921 tgcgcactaa aaaaatcgat ctcgtcaaat ttcagactta tccatcagac tatactgttg
     1981 tacctataaa ggagcagtgg aatagcgttc gcagaccgta actttcaggc acttaccctg
     2041 aagtacgggg ctgtgggata aaaacaatct ggaggaatgt cgtgcaaacc tttcaagccg
     2101 atcttgccat tgtaggcgcc ggtggcgcgg gattacgtgc tgcaattgct gccgcgcagg
     2161 caaatccaaa tgcaaaaatc gcactaatct caaaagtata cccgatgcgt agccataccg
     2221 ttgctgcaga agggggctcc gccgctgtcg cgcaggatca tgacagcttc gaatatcact
     2281 ttcacgatac agtagcgggt ggcgactggt tgtgtgagca ggatgtcgtg gattatttcg
     2341 tccaccactg cccaaccgaa atgacccaac tggaactgtg ggggtgccca tggagccgtc
     2401 gcccggatgg tagcgtcaac gtacgtcgct tcggcggcat gaaaatcgag cgcacctggt
     2461 tcgccgccga taagaccggc ttccatatgc tgcacacgct gttccagacc tctctgcaat
     2521 tcccgcagat ccagcgtttt gacgaacatt tcgtgctgga tattctggtt gatgatggtc
     2581 atgttcgcgg cctggtagca atgaacatga tggaaggcac gctggtgcag atccgtgcta
     2641 acgcggtcgt tatggctact ggcggtgcgg gtcgcgttta tcgttacaac accaacggcg
     2701 gcatcgttac cggtgacggt atgggtatgg cgctaagcca cggcgttccg ctgcgtgaca
     2761 tggaattcgt tcagtatcac ccaaccggtc tgccaggttc cggtatcctg atgaccgaag
     2821 gctgccgtgg tgaaggcggt attctggtca acaaaaatgg ctaccgttat ctgcaagatt
     2881 acggcatggg cccggaaact ccgctgggcg agccgaaaaa caaatatatg gaactgggtc
     2941 cacgcgacaa agtttctcag gccttctggc acgaatggcg taaaggcaac accatctcca
     3001 cgccgcgtgg cgatgtggtt tatctcgact tgcgtcacct cggcgagaaa aaactgcatg
     3061 aacgtctgcc gttcatctgc gaactggcga aagcgtacgt tggcgtcgat ccggttaaag
     3121 aaccgattcc ggtacgtccg accgcacact acaccatggg cggtatcgaa accgatcaga
     3181 actgtgaaac ccgcattaaa ggtctgttcg ccgtgggtga atgttcctct gttggtctgc
     3241 acggtgcaaa ccgtctgggc tccaactccc tggcggaact ggtggtcttc ggccgtatgg
     3301 ccggtgaaca agcgacagag cgtgcagcaa ctgccggtaa tggcaacgaa gaggcaattg
     3361 aagcgcaggc agctggcgtt gaacaacgtc tgaaagatct ggttaaccag gatggcggcg
     3421 aaaactgggc gaagatccgc gacgaaatgg gcctagcaat ggaagaaggt tgcggtatct
     3481 accgtacgcc ggaactgatg cagaaaacca tcgacaagct ggcagagctg caggaacgct
     3541 tcaagcgcgt gcgcatcacc gacacctcca gcgtgttcaa caccgacctg ctctacacca
     3601 ttgaactggg ccacggtctg aacgttgctg aatgtatggc gcactccgca atggcacgta
     3661 aagagtcccg cggcgcacac cagcgtctgg acgaaggttg caccgagcgt gacgacgtca
     3721 acttcctcaa acacaccctc gccttccgcg atgctgatgg cacgactcgc ctggagtaca
     3781 gcgacgtgaa gattactacg ctgccgccag ctaaacgcgt ttacggtggc gaagcggatg
     3841 cagccgataa ggcggaagca gccaataaga aggagaaggc gaatggctga gatgaaaaac
     3901 ctgaaaattg aggtggtgcg ctataacccg gaagtcgata ccgcaccgca tagcgcattc
     3961 tatgaagtgc cttatgacgc aactacctca ttactggatg cgctgggcta catcaaagac
     4021 aacctggcac cggacctgag ttaccgctgg tcctgccgta tggcgatttg tggttcctgc
     4081 ggcatgatgg ttaacaacgt gccaaaactg gcatgtaaaa ccttcctgcg tgattacacc
     4141 gacggtatga aggttgaagc gttagctaac ttcccgattg aacgcgatct ggtggtcgat
     4201 atgacccact tcatcgaaag tctggaagcg atcaaaccgt acatcatcgg caactcccgc
     4261 accgcggatc agggtactaa catccagacc ccggcgcaga tggcaaagta tcaccagttc
     4321 tccggttgca tcaactgtgg tctgtgctac gccgcgtgcc cgcagtttgg cctgaaccca
     4381 gagttcatcg gtccggctgc cattacgctg gcgcatcgtt ataacgaaga tagccgcgac
     4441 cacggtaaga aggagcgtat ggcgcagttg aacagccaga acggcgtatg gagctgtact
     4501 ttcgtgggct attgctccga agtctgcccg aaacacgtcg atccggctgc ggccattcag
     4561 cagggcaaag tagaaagttc gaaagacttt cttatcgcga ccctgaaacc acgctaagga
     4621 gtgcaacatg acgactaaac gtaaaccgta tgtacggcca atgacgtcca cctggtggaa
     4681 aaaattgccg ttttatcgct tttacatgct gcgcgaaggc acggcggttc cggctgtgtg
     4741 gttcagcatt gaactgattt tcgggctgtt tgccctgaaa aatggcccgg acgcctgggc
     4801 gggattcgtc gactttttac aaaacccggt tatcgtgatc attaacctga tcactctggc
     4861 ggcagctctg ctgcacacca aaacctggtt tgaactggca ccgaaagcgg ccaatatcat
     4921 tgtaaaagac gaaaaaatgg gaccagagcc aattatcaaa agtctctggg cggtaactgt
     4981 ggttgccacc atcgtaatcc tgtttgttgc cctgtactgg taaggagcct gagatgatta
     5041 atccaaatcc aaagcgttct gacgaaccgg tattctgggg cctcttcggg gccggtggta
     5101 tgtggagcgc aattattgcg ccggtgatga tcctgctggt gggtattctg ctgccactgg
     5161 ggctgtttcc gggtgatgcg ctgagctacg agcgcgttct ggcgttcgcg cagagcttca
     5221 ttggtcgcgt attcctgttc ctgatgatcg ttctgccgct gtggtgtggt ttacaccgta
     5281 tgcaccacgc gatgcacgat ctgaaaattc acgtgcctgc gggcaaatgg gttttctacg
     5341 gtctggctgc tatcctgaca gttgtcacgc tgattggtat cgttacaatc taacgtatcg
     5401 ccaatgtaaa tccggcccgc ctatggcggg ccgttttgta tggaaaccag accttatgtt
     5461 caaaacgacg ctctgcgcct tattaattac cgcctcttgc tccacatttg ctgcccctca
     5521 acaaatcaac gatattgtgc atcgcacaat taccccgctt atagagcaac aaaagatccc
     5581 cggtatggcg gtggcggtaa tttatcaggg taaaccttat tactttacct ggggctatgc
     5641 ggacatcgcc aaaaagcagc ccgtcacaca gcaaacgttg tttgagttag gttcggtcag
     5701 caaaacattt acgggcgtgc ttggtggcga tgctattgct cgaggggaaa tcaagttaag
     5761 cgatcccgca acaaaatact ggcctgaact taccgctaaa cagtggaatg ggatcacact
     5821 attacatctt gcgacctaca ccgctggcgg cctgccattg cagatgccgg atgaagtgaa
     5881 atcctcaagc gacttgctgc gcttctatca aaactggcag cctgcatggg ctccaggaac
     5941 acaacgtctg tatgccaact ccagtatcgg tttgttcggc gcactggctg tgaagccgtc
     6001 tggtttgagt tttgagcagg cgatgcaaac tcgtgtcttc cagccactca aactcaacca
     6061 tacgtggatt aatgtaccgc ccgcagaaga aaagaattac gcctggggat atcgcgaagg
     6121 caaggcagtt catgtttcgc caggggcgtt agatgctgaa gcttatggtg tgaagtcgac
     6181 cattgaagat atggcccgct gggtgcaaag caatttaacc ccccttgata tcaatgagaa
     6241 aacgcttcaa caagggatac aactggcaca atctcgctac tggcaaaccg gcgatatgta
     6301 tcagggcctg ggctgggaaa tgctggactg gccggtcaat cctgacagca tcattaacgg
     6361 cagtgacaat aaaattgcac tggcagcacg cccggtaaaa gcgattaagc ccccaactcc
     6421 tgcagtacgc gcatcatggg tacataaaac gggggcgacc ggcggatttg gtagctatgt
     6481 cgcgtttatt ccagaaaaag agctgggtat cgtgatgctg gctaacaaaa actatcccaa
     6541 tccagcgaga gtcgccgccg cctgtcagat tctcaacgct ctacagtaaa atttcatcgg
     6601 gtccgaattt tcggaccttt tctgcgcttt tccttgctgt catctacact tagaaaaaaa
     6661 ccagtaagga aacatttatg cgcctgctcc ctctcgttgc cgcagcgaca gctgcatttc
     6721 tggtcgttgc ctgcagttct cctacgccgc cgcgtggcgt gacagtagtg aataatttcg
     6781 acgctaaacg ctatctcggt acctggtatg agattgcccg ttttgatcac cgttttgaac
     6841 gtggactgga aaaagtcacc gcaacataca gtctgcgtga tggcggcggc ctgaatgtca
     6901 tcaataaagg ctataaccct gacagagaaa tgtggcagca gagtgaaggg aaagcgtact
     6961 ttaccggcgc accaacacgc gctgcgctga aagtgtcatt ctttggtctt ttctatggcg
     7021 gttataacgt cattgcactt gatcgggaat accgccatgc gctggtttgc ggcccggacc
     7081 gcgactacct gtggatactc tcccgcacgc caaccatttc tgacgaagtg aaacaggaga
     7141 tgctggcagt cgcgacccgg gaagggtttg atgtcagtaa gtttatttgg gtacagcagc
     7201 ccggtagtta gtgagtgctg agtttcagac caataatccc caatacgatt aacgccagac
     7261 tcgccaggcg catcgggtta gcggactcac cgagcagcac aatgccggtg atagccgcgc
     7321 cgactgcgcc aatacccgtc cacacggcat aagccgtccc tactggtaac gatttcatcg
     7381 cccaggcaag tagcgccata ctgacaatca tcgccgtcac ggtaataaca ctcggcgtca
     7441 aacgactaaa gccgtgggta tatttcaggc caacggccca taccacttcc agcagaccag
     7501 caataactaa gataatccag gacatatcag gctccggaga attggggccg tccccggtga
     7561 aaagacgcgt ttgcaggtcg tcctgcaaag ctgatggttg aacggatatt ttgccaggtg
     7621 gcaggggaat ttcaactatt accttagtga ctatcgcaga aaaaacaaac ggcacgacac
     7681 agctgtcgta ccgttattgc ttattgctat tgctgcgctt tcgttgctgc gccagaaatc
     7741 gcgttaccgc catcagaaat gtcttcacca acgccacgcg tggtgttgca ggcagttaat
     7801 actgttgaaa gcaccagaac agaaaagatc gctgcaattg tcttcttcac cataacgtct
     7861 tccttttagg taatgttatt tatgtttgcc tatagcaaat taataataga caacatcgcc
     7921 aaaaatgacg gaaatctgat gatttttcgg aagagaagaa aaattagctg gcagcgcgag
     7981 agatggagtt gccgagatgt ttgatgtctt cgccgaaacc gcgagcggtg ttacagcccg
     8041 tgagcagcgt actggcaagc aaaacaagaa cgataaggcg tttcatcatc tctgacctga
     8101 ataagtgatg gtgcagcctg caggccgcac cacaaccgca ttacttcacg cgagagacgt
     8161 attcaccaga gcgggtatcc actttgatga cttcgccgat ttgtacgaac agcggaacct
     8221 taaccacagc gccagtagac agggtagccg gtttgccgcc agtacctgcg gtatcacctt
     8281 tcaggcccgg atcggtatca acgatttcca gttcaacgaa gttcggcgga gtaacggaga
     8341 tcggctgacc attccacaga gttacgatac actctgcctg atccagcagc catttagcgt
     8401 tatcgccaat tgcttttgca tcagcagaca gctgctcgaa agtttcgttg ttcatgaagt
     8461 gccagaactc accgtcgttg tacaggtaag tcaggttcat atcgacaaca tcagcgcctt
     8521 cagcggaatc agtagatttg aaggtttttt ctacgcgagt accggtcagc agacgacgca
     8581 gtttaacgcg agcaaatgcc tggcctttac ccggttttac gaattcactc gcttcaaccg
     8641 cgtaaggttc gccgtctaac atgattttaa gaccagcacg aaaatcgttg ctatagtacg
     8701 ttgccataag gccctctgaa atttgttaat tggtagctaa gccacaaaat ggcgcatatt
     8761 gtaaccctaa ataccccatc cagagaagat tggttaacgc aacttgccga tgttgtgacc
     8821 gatcctgatg aacttctgcg tcttttgaat atagacgcgg acgaaaaact gttggccgga
     8881 cgcagcgcca aaaagctgtt tgccctgcgt gtgccccgct catttatcga tcgcatggag
     8941 aaaggcaatc cggacgatcc tcttttgcgt caggtactta cctcgcaaga tgagtttgtc
     9001 gtcgcgtccg gattctccac cgacccactg gaagaacagc acagcgtagt gcctggtttg
     9061 ttgcataaat accacaaccg ggcgcttttg ctggtcaaag gcggctgcgc ggtaaattgc
     9121 cgctattgct tccgtcgcca cttcccctat gccgaaaatc agggcaacaa gcgtaactgg
     9181 cagactgcac ttgagtatgt tgctgcgcat ccggaactgg acgagatgat tttctccggc
     9241 ggcgatccgc tgatggcgaa agatcacgag ctggactggt tgctcacaca actggaagcc
     9301 atcccgcata tcaaacgtct gcggattcac agtcgtctgc cgattgtgat cccggcacgc
     9361 atcacagatg cgctggttga acgcttttca cattctacgc tgcaaatcct gctggtgaat
     9421 cacatcaacc atgccaatga gatagatgaa acattccgtc aggcgatggc taagttgcgc
     9481 cgggtaggcg ttactttgct gaaccagagc gttctgttac gtgatgtgaa cgataacgca
     9541 caaacgctgg caaacctgag taatgcgttg ttcgatgccg gcgtgatgcc gtattacctg
     9601 catgtgctcg ataaagtaca gggcgcagcg cattttatgg tgagtgatga cgaagcacgg
     9661 cagattatgc gtgagttgct gacattggtg tcgggatatc tggtgccgaa actggcgcga
     9721 gaaattggcg gcgaacccag caaaacgccg ctggatctcc agctacgcca gcagttactg
     9781 attaaacagg gaagttaaac attaaaattg cctgatgcgc tacgcttatc aggcctacat
     9841 cgtgcattga aattgaatgg atttgcaatg aactgtaggc cggataaggc gtttacgccg
     9901 catccggcaa gagcaacaaa cgcaagtaca gcaacctgtc attaaactga gaaatttaat
     9961 ctttgcccgt tgcataacct ttaattattc atatgcattg ctgttgttac tttttatata
    10021 gctaacacca ataattaacc tttcttttct gtttatatag agtgagcacg gctatttatg
    10081 ttattttaac aactgttact accaagccca tttatctggc ttataaatta aaattaatta
    10141 tttaattgag aaatggttag ggagaaccta catggccata agcatcaagg gtgttaatac
    10201 cggtgttatt cgcaagagta ataatttcat tgcactggcg ctgaaaatta aagaacctcg
    10261 caataaagaa tcgttgttct ttatgtctgt catggaactg cgcgacctgc tgattgcgct
    10321 ggaaagtcgt ctgcatcaaa agcataaact ggatgctgct gcacgccttc agtatgagca
    10381 agctcgcgat aaagtcatta agaaaatggc agaaaacatc ccagaaattc tggttgatga
    10441 gcttaaaaat gccgatatta atcgtcgggt taacacgctg gaacttaccg ataatcaagg
    10501 cgaaaatctt accttcgtat taacgctaca tgacggtagc aaatgtgagt tagtcgtcaa
    10561 tgagttgcag attgaaatgc tagcgcgagc aatcattcat gcaattaata atgcggaaat
    10621 gcgtgaactg gcattacgta ttacctcact gttagatttc ctgccgttat atgacgttga
    10681 ctgccaggaa aatggcaatc tggaatatga cacctattcc caaccggaat ggaaacataa
    10741 cttgttcgac cattatctgg cggtgcttta ccgctttaaa gatgaaagtg gcaaagaaca
    10801 atttagcggc gcagtggtga aaacgcgtga agcaacgccg ggtaaagaag tagaggcgat
    10861 cactcgccga atgcttgatt tcagcccacg actgaaaaaa ctcgcgggtg tgccatgtca
    10921 ggtctatgtt cgcaccgtag cggcgaataa cgcccaaccg ctaacccagg atcaatgctt
    10981 acgcgcgctg catcacttac gtgttcaatc caccagcaaa actgcaccac aggcgaaata
    11041 atctcatctt tgctaatgcg aggctggagc catccagcct gaaatgactg ataacgtgat
    11101 cgttggtcat gccggatgcg gcgtaaacgc cttatccggc ctacaaattc tcaagcattc
    11161 aatcagttgc aatgcctgct gtaggcctga taagcgaagc gcatcaggca ataatacgtt
    11221 tgtcacccag cctctggatc acatcagttc gggcacttat aaacctgacc gataatctgg
    11281 ctatccgtcg ggacaaaact ggacaacatt ccctgcgacg ggctgctgat gccataaatc
    11341 acgttaccgc ccattgcagc cgcctggttg cgcagatcgt ttgctgcgcc gcgcatagaa
    11401 ccgccctctt ctccgtgttg cccggaaagc cagttgcttt gcttacctgt cgcagtacca
    11461 atcagctggc actctgcgcc tggctgctcg tccacaatgc gtacactctg accggcagca
    11521 ctcaattcgt tgctggagct acaacccgcc atcagtagcg cggcaccgac aatccctgct
    11581 aagtatttta cgtgcatgtt attccccata atcaatgagc tggacgccac tcgcgtcgtc
    11641 cgtgtctgaa tcttatacta gaaagatgac caaaagaaaa acccccagac atttctgccc
    11701 gggggtttgt ttatttctgc gaggtgcagg gcaattacat catgccgccc atgccaccca
    11761 tgccgcccat accgccagca gcgcctaagt cagctgcatc gtttttcggc aggtcggtaa
    11821 ccatgcactc ggtggtgatc atcaggccag ccacagaagc cgcgtactgc agagcagaac
    11881 gggttacttt ggttggatcc aagataccca tgtcgatcat gttgccgtat tcttcggttg
    11941 ctgcgttgta accgtagttg ccgtcgccgc ctttaacagt gttagcaaca acagacggtt
    12001 cttcgccgca gttcaatacg atctgacgca gcggagcttc cattgcacgc agtgcaactt
    12061 tgatacccac gttctggtct tcgttctgac cacgcaggtc agccagttta gacgctacgc
    12121 ggatcagcgc aacaccacca ccagcaacca cgccttcttc taccgcagca cgggtcgcgt
    12181 gcagggcatc ttcaacgcgt gcttttttct ctttcatttc aacttcggta gcagcaccta
    12241 ctttgataac tgcaacgccg cctgccagtt tcgctacgcg ctcctgcagt ttttcacggt
    12301 cgtagtcaga agttgcttct tcaatctgct gacggatctg agcaacacgg ccctggattg
    12361 cagcttcttc acccacgcca tcaatgatgg tggtggtgtc tttgttgatc acaacacgtt
    12421 tagcctgacc caggtcttcc agggttgctt tttccagctc cataccgatc tcttcagaga
    12481 ttacggtacc gccagtcagg gttgcgatat cctgcagcat agctttacgg cgatcgccga
    12541 agcccggagc tttaaccgca gcaactttca cgatgccacg catggtgtta acaaccagag
    12601 ttgccagcgc ttcgccttca acatcttcag cgatgatcag cagcggttta cctgctttag
    12661 caacggcttc cagaaccggc agcatttcgc ggatgttgga gattttcttg tcagccagca
    12721 ggatgaacgg gctttccagt tctactgcgc cagtttccgg cttgttgatg aagtaaggag
    12781 acaggtagcc acggtcgaac tgcatacctt caaccacgtc cagttcgtcc tgcagaccgg
    12841 taccgtcttc aacggtgata acgccttctt taccgacttt gtccatcgct tcagcgatca
    12901 gtttacctac ggtttcgtcg gagttagcgg agatggtacc aacctgagca atcgctttag
    12961 agtcagagca tggtacggac agcgctttca gttcttcaac tgcagcggta acagctttgt
    13021 cgataccacg tttcaggtcc atcgggttca tgcccgcagc aactgctttc agaccctcag
    13081 tgatgatagc ctgagccagt acggttgcag tggtggtacc gtcgcctgca gcgtcgttcg
    13141 ctttagaggc aacttctttc accatctgcg cacccatatt ttcgaacttg tcttccagtt
    13201 cgatttcacg agcaacggaa acaccatctt tggtgatggt cggtgcaccg aaagatttat
    13261 ccagaactac gttacggcct ttcggaccga gggtaacttt cactgcatct gccagtacgt
    13321 ttacgccgcg cagcattttc acacgagcgt cgttaccgaa ttttacgtct ttagctgcca
    13381 ttatctttat tccttaaatt cgtatgttca gtgtcgtgcg aggattacgc ttcaacaatt
    13441 gccagaatgt cgctttcgga catgatcaac acttcttcat tgtcgatctt ctcagatttc
    13501 acaccgtagc catcgttgaa aataacgatg tcgccaactt tcacatccag cggcttcact
    13561 tcgccatttt caaggatacg gccattgccg acagccagca cttcgccgcg ggtggattta
    13621 gccgctgcag agccggtcag aacgatgccg ccagcagatt tagtttcaac ttctttacgc
    13681 ttgacgatca cgcgatcatg caatggacga atattcattg ataactctcc tttgagaaag
    13741 tccgtatctg ttatgggtga cgccggagct tacgtggttt cccggctggt gaccagagaa
    13801 atggggatga ggattcgccc cttcaagggg gaaaaagaaa aaaaattctg atcagcacaa
    13861 aatcgggtga aaaccctgat tcacctcaca tttcatcgca atttcttcat cgccgtcata
    13921 agcgaatctg attgtgctac catcgaaaat ctacgcagtt gcccaaaatt tgggcgcaat
    13981 cggatatcaa cccatgagtg gactcaaaca agaactgggg ctggcccagg gcattggcct
    14041 gctatcgacg tcattattag gcaccggcgt gtttgccgtt cctgcgttag ctgcacaggt
    14101 agcaggcaat aacagcctgt gggcgtggcc cgttttgatt atcttagtgt tcccgattgc
    14161 gattgtgttt gcgattctgg gtcgccacta tccctgcgca ggcggtgtcg cgcacttcgt
    14221 cggtatggcg tttggttcgc ggcttgagcg agtcaccggc tggttgtttt tatcggtcat
    14281 tcccgtgggt ttgccagccg cgctacaaat tgccgccggg ttcggccagg caatgtttgg
    14341 ctggcatagc tggcaactgt tgttggcaga actcggtacg ctggcgctgg tgtggtatat
    14401 cggtactcgc agtgccagtt ccagtgctaa tctacaaacc gttattgccg gacttatcgt
    14461 cgcgctgatt gtcgctatct ggtgggcggg cgatatcaaa cctgcgaata tccccttccc
    14521 ggcacctggt aatatcgaac ttaccgggtt atttgctgcg ttatcagtga tgttctggtg
    14581 ttttgtcggt ctggaagcat ttgcccatct tgcctcggaa tttaaaaatc cagagcgtga
    14641 ttttcctcgc gcattgatga ttggtctgct gctggcagga ttagtctact ggggctgtac
    14701 ggtagtcgtc ttacacttcg acgcctatgg tgaaaaaatg gcggcggcag catcgcttcc
    14761 aaaaattgta gtgcaactgt tcggtgtagg agcgttatgg attgcctgcg tgattggcta
    14821 tctggcctgc tttgccagtc tcaacattta tatacagagc ttcgcccgcc tggtctggtc
    14881 gcaggcgcaa cataatcctg accactacct ggcacgcctc tcttctcgcc atatcccgaa
    14941 taatgccctc aatgcggtgc tcggctgctg tgtggtgagc actttggtga ttcatgcttt
    15001 agagatcaat ctggacgctc ttattattta tgccaatggc atctttatta tgatttatct
    15061 gttatgcatg ctggcaggct gtaaattatt gcaaggacgt tatcgactac tggcggtggt
    15121 tggcgggctg ttatgcgttc tgttactggc aatggtcggc tggaaaagtc tctatgcgct
    15181 gatcgtgctg gcggggttat ggctgttgct gccaaaacga aaaacgccgg aaaatggcat
    15241 aatcacataa tccggcgttt cgacattaat cctggcgatc gtctttatga tcaaggcggt
    15301 cgcgctcatc atcctttcgc tggtactcac catcaaaagt attaccgcca ccggtcccgg
    15361 cgctaaaacc gccgcctggc atacgagaaa agcgcaaatg cggcatcaac ttcactgtca
    15421 gatgcttttg caccggcggt aataaaagca gaagaccgag gaagtcggtg aaaaagcccg
    15481 gtaataaaag cagcaaaccg gcaatgatca gcgaaacact tttaatcatc tccgccgctg
    15541 ggttttcacc cgccgccatt ttttgctgca tcagcacgaa attcttaaag ccctggttac
    15601 gtaccagtga catcccgata actgacgtga atataaccag cacgagggtc agcaataccc
    15661 ccaatacatg ggcaacctga ataaagattg aaatctcaat atagacataa aggaaaatgg
    15721 caataaaagg taaccagcgc aaaggtttct cctgtaatag cagccggtaa aacccggcta
    15781 cctgaatggg ttgcgaatcg cgttcagctt atattgtggt cattagcaaa atttcaagat
    15841 gtttgcgcaa ctatttttgg tagtaatccc aaagcggtga tctatttcac aaattaataa
    15901 ttaaggggta aaaaccgaca cttaaagtga tccagattac ggtagaaatc ctcaagcagc
    15961 atatgatctc gggtattcgg tcgatgcagg ggataatcgt cggtcgaaaa acattcgaaa
    16021 ccacatatat tctgtgtgtt taaagcaaat cattggcagc ttgaaaaaga aggttcacat
    16081 gtcaaacaac attcgtatcg aagaagatct gttgggtacc agggaagttc cagctgatgc
    16141 ctactatggt gttcacactc tgagagcgat tgaaaacttc tatatcagca acaacaaaat
    16201 cagtgatatt cctgaatttg ttcgcggtat ggtaatggtt aaaaaagccg cagctatggc
    16261 aaacaaagag ctgcaaacca ttcctaaaag tgtagcgaat gccatcattg ccgcatgtga
    16321 tgaagtcctg aacaacggaa aatgcatgga tcagttcccg gtagacgtct accagggcgg
    16381 cgcaggtact tccgtaaaca tgaacaccaa cgaagtgctg gccaatatcg gtctggaact
    16441 gatgggtcac cagaaaggtg aatatcagta cctgaacccg aacgaccatg ttaacaaatg
    16501 tcagtccact aacgacgcct acccgaccgg tttccgtatc gcagtttact cttccctgat
    16561 taagctggta gatgcgatta accaactgcg tgaaggcttt gaacgtaaag ctgtcgaatt
    16621 ccaggacatc ctgaaaatgg gtcgtaccca gctgcaggac gcagtaccga tgaccctcgg
    16681 tcaggaattc cgcgctttca gcatcctgct gaaagaagaa gtgaaaaata tccaacgtac
    16741 cgctgaactg ctgctggaag ttaaccttgg cgcaacagca atcggtactg gtctgaacac
    16801 gccgaaagag tactctccgc tggcagtgaa aaaactggct gaagtcactg gcttcccatg
    16861 cgtaccggct gaagacctga tcgaagcgac ctctgactgc ggcgcttatg ttatggttca
    16921 cggcgcgctg aaacgcctgg ctgtgaagat gtccaaaatc tgtaacgacc tgcgcttgct
    16981 ctcttctggc ccacgtgccg gcctgaacga gatcaacctg ccggaactgc aggcgggctc
    17041 ttccatcatg ccagctaaag taaacccggt tgttccggaa gtggttaacc aggtatgctt
    17101 caaagtcatc ggtaacgaca ccactgttac catggcagca gaagcaggtc agctgcagtt
    17161 gaacgttatg gagccggtca ttggccaggc catgttcgaa tccgttcaca ttctgaccaa
    17221 cgcttgctac aacctgctgg aaaaatgcat taacggcatc actgctaaca aagaagtgtg
    17281 cgaaggttac gtttacaact ctatcggtat cgttacttac ctgaacccgt tcatcggtca
    17341 ccacaacggt gacatcgtgg gtaaaatctg tgccgaaacc ggtaagagtg tacgtgaagt
    17401 cgttctggaa cgcggtctgt tgactgaagc ggaacttgac gatattttct ccgtacagaa
    17461 tctgatgcac ccggcttaca aagcaaaacg ctatactgat gaaagcgaac agtaatcgta
    17521 cagggtagta caaataaaga aggcacgtca gatgacgtgc cttttttctt gtgaacagta
    17581 acttaaaaac aacaacctaa tatcaacttg ttaaaaaaca aggaaggcta atatgctagt
    17641 tgtagaactc atcatagttt tgctggcgat cttcttgggc gccagattgg ggggaatagg
    17701 tattggtttt gcaggcggat tgggggtgct ggttcttgcc gctattggcg ttaaacccgg
    17761 taacatcccg ttcgatgtca tttccattat catggcggtt atcgccgcta tttctgccat
    17821 gcaggttgct ggcggtctgg actatctggt tcatcagaca gaaaagctgc tgcgccgtaa
    17881 cccgaaatac atcacgatcc tcgcacctat cgtgacctat ttcctgacaa tctttgctgg
    17941 tactggcaac atctctctgg cgacactgcc agttatcgct gaagttgcga aggaacaagg
    18001 cgttaaacct tgccgtccgc tctctactgc agtggtatcc gcgcagattg cgatcaccgc
    18061 atcgccaatc tcagcggcag tggtttacat gtcttccgtg atggaaggtc atggcatcag
    18121 ctacctccat ctgctctccg tggtcatccc gtccaccctg ctggcggttc tggtgatgtc
    18181 ctttctggtc actatgctgt tcaactccaa actctctgac gatccgattt atcgcaagcg
    18241 tctggaagag ggcctggttg aactgcgcgg tgaaaagcag attgaaatca aatccggtgc
    18301 aaaaacgtcc gtctggctgt tcctgctggg cgtagttggc gtggttatct atgcaatcat
    18361 caacagccca agcatgggtc tggttgaaaa accgctgatg aacaccacca acgcaatcct
    18421 gatcatcatg ctcagcgttg caactctgac caccgttatc tgtaaagtcg ataccgacaa
    18481 catcctcaac tccagcacct tcaaagcagg tatgagcgcc tgtatttgta tcctgggtgt
    18541 tgcgtggctg ggcgatactt tcgtttccaa caacatcgac tggatcaaag ataccgctgg
    18601 tgaagtgatt cagggtcatc cgtggctgct ggccgtcatc ttcttctttg cttctgctct
    18661 gctgtactct caggctgcaa ccgcaaaagc actgatgccg atggctctgg cactgaacgt
    18721 ttcaccgctg accgctgttg cttctttcgc tgcggtgtct ggtctgttca ttctgccgac
    18781 ctacccgacg ctggttgctg cggtacagat ggatgacacg ggtactaccc gtatcggtaa
    18841 attcgtcttc aaccatccgt tcttcatccc gggtactctg ggtgttgccc tggccgtttg
    18901 cttcggcttc gtgctgggta gcttcatgct gtaatgatca atcgcggggc gttcacgccc
    18961 cgctttcttt cccgccgact aacatccttc ccccgtacgt tgtatagtga cctctctctt
    19021 gcggttccat ctgttcttgc gaggtgttta tgcttgatga aaaaagttcg aataccgcgt
    19081 ctgtcgtggt gctatgtacg gcaccagatg aagcgacagc ccaggattta gctgccaaag
    19141 tgctggcgga aaaactggcg gcctgcgcga ccttgatccc cggcgctacc tctctctatt
    19201 actgggaagg taagctggag caagaatacg aagtgcagat gattttaaaa actaccgtat
    19261 ctcaccagca ggcactgctg gaatgcctga agtctcatca tccatatcaa accccggaac
    19321 ttctggtttt acctgttaca cacggagaca cagattacct ctcatggctc aacgcatctt
    19381 tacgctgatc ctgctacttt gcagcacttc cgtttttgcc ggattattcg acgcgccggg
    19441 acgttcacaa tttgtccccg cggatcaagc ctttactttt gattttcagc aaaaccaaca
    19501 tgaccttaat ctgacctggc agatcaaaga cggttactac ctctaccgta aacagatccg
    19561 cattacgccg gaacacgcga aaattgccga cgtgcagctg ccgcaaggcg tctggcatga
    19621 agatgagttt tacggcaaaa gcgagattta ccgcgatcgg ctgacgcttc ccgtaaccat
    19681 caaccaggcg agtgcgggag cgacgttaac tgtcacctac cagggctgtg ctgatgccgg
    19741 tttctgttat ccgccagaaa ccaaaaccgt tccgttaagc gaagtggtcg ccaacaacgc
    19801 agcgtcacag cctgtgtctg tttcgcagca agagcagcac accgcgcaat tgcccttttc
    19861 cgcgctctgg gcgttgttga tcggtattgg tatcgccttt acgccatgcg tgctgccaat
    19921 gtacccactg atttctggca tcgtgctggg tggtaaacag cggctctcca ctgccagagc
    19981 attgttgctg acctttattt atgtgcaggg gatggcactg acttacacgg cgctgggtct
    20041 ggtagttgcc gccgcagggt tacagttcca ggcggcgcta cagcacccat acgtgctcat
    20101 tggcctcgcc atcgtcttta ccttgctggc gatgtcaatg tttggcttgt ttactctaca
    20161 actcccctct tcgctgcaaa cacgtctcac gttgatgagc aatcgccaac agggcggctc
    20221 acctggcggt gtgtttgtta tgggggcgat tgccggactt atctgttcac catgcaccac
    20281 cgcaccgctt agcgcgattc tgctgtatat cgcccaaagc gggaacatgt ggctgggcgg
    20341 cggcacgctt tatctctatg cgttgggcat gggcctgccg ctgatgctaa ttaccgtctt
    20401 tggtaaccgc ttgctgccga aaagcggccc gtggatggaa caagtcaaaa ccgcgtttgg
    20461 ttttgtgatc ctcgcactgc cggtcttcct gctggagcga gtgattggtg atgtatgggg
    20521 attacgcttg tggtcggcgc tgggtgtcgc attctttggc tgggccttta tcaccagcct
    20581 acaggctaaa cgcggttgga tgcgcgtggt gcaaataatc ctgctggcag cggcattggt
    20641 tagcgtgcgc ccacttcagg attgggcatt tggtgcgacg cataccgcgc aaactcagac
    20701 gcatctcaac tttacacaaa tcaaaacggt agatgagtta aatcatgcgc tcgttgaagc
    20761 caaaggcaaa ccggtgatgt tagatcttta tgccgactgg tgcgtcgcct gtaaagagtt
    20821 tgagaaatac accttcagcg acccgcaggt gcaaaaagcg ttagcagaca cggtcttact
    20881 tcaggccaac atcacggcca acgacgcaca agatgtggcg ctgttaaagc atcttaatgt
    20941 ccttggccta ccgacaattc tcttttttga cggacaaggc caggagcatc cacaagcacg
    21001 cgtcacgggc tttatggatg ctgaaacctt cagcgcacat ttgcgcgatc gccaaccgtg
    21061 aacgacactt gcagcgggaa agacggagga aaatagcgtg caacgtgaag atgtactggg
    21121 agaagccctg aaattattag aattacaagg gattgccaac accacgctgg agatggttgc
    21181 tgaacgtgtg gattatccac tggacgagct acgccgcttc tggccagaca aagaggcaat
    21241 cctctacgat gcgctgcgtt atcttagcca acagatagat gtctggcgtc gtcagctgat
    21301 gctggacgaa acgcaaaccg ccgaacaaaa gcagctggca cgttatcagg cgttatcgga
    21361 gtgcgttaaa aacaaccgct atccgggctg tctatttatc gctgcctgta cgttttatcc
    21421 cgatcctggc caccctattc atcaactggc cgatcagcaa aaaagcgcgg cctacgattt
    21481 cacccacgaa ctgttaacca cactggaagt tgacgatccg gcgatggtag caaagcagat
    21541 ggaactggtg ctggaaggct gtttaagccg aatgctggtg aatcgtagcc aggcggatgt
    21601 cgacactgca catcggctgg cggaagatat cctgcgcttc gcccgctgcc gccagggtgg
    21661 tgcattgacc tgacagaaac acagaaaaga agcgatttgc cgcaatctta agcagttgaa
    21721 tcgcttttac tgaaattagg ttgacgagat gtgcagatta cggtttaatg cgccccgttg
    21781 cccggatagc tcagtcggta gagcagggga ttgaaaatcc ccgtgtcctt ggttcgattc
    21841 cgagtccggg caccaaattc atatcaacgg acctctacgg aggttcgttt ttcgtttcag
    21901 aacgccacga tttaagcgtt ctgcctacaa atcaattcta ccgaactcaa ccagattccc
    21961 cccacatcaa ccccattgtg tgggtataat tgcgggcata ccccagttcg acagaatttg
    22021 taccctcttt aacgcattca gaaggctgaa ctatggcact gactgacgca aaaatccggg
    22081 ctgcaaagcc cactgacaag gcttataaac tcactgacgg gactggcatg ttcctgctgg
    22141 tacatcctaa tggctcccgt tactggcgtc tccgttatcg tattctgggt aaggagaaga
    22201 ctctggcact tggtgtgtat ccagaagttt ctctctccga agctcgtaca aaacgggatg
    22261 aggcccgaaa actgatttcg gagggggttg acccttgcga acagaaaaga gctaaaaaag
    22321 tagtccctga tttacagctc tcttttgaac atattgcgcg acgctggcat gccagtaata
    22381 aacaatgggc acaatcacac agcgataaag tactcaaaag cctcgagact cacgttttcc
    22441 cctttatcgg caaccgggat atcacaacac tcaatacccc ggatctgctt atccctgttc
    22501 gtgctgcaga agctaaacaa atttatgaaa tcgccagtcg tctgcagcaa agaatatctg
    22561 ccgtaatgcg ttatgccgta cagtctggca tcatcagata taatcctgct ctggatatgg
    22621 ctggcgcatt gactacggta aaacgccagc atcgccccgc tcttgatctt tctcgcctgc
    22681 ctgaactttt gtcgcgtatt ggcagttaca aagggcaaac tgtcacccag cttgccgtta
    22741 tgctgaattt actggttttt attcgttcca gtgaactcag atacgcccgc tggtctgaaa
    22801 ttgatattga caatgccatg tggactattc cagccgaacg cgaacccctg ccaggcgtaa
    22861 aattctcaca ccggggctcc aagatgcgaa caccacatct tgtgccactc agcaaacagg
    22921 ctgtagccat actgacagaa ctacagacat gggctggtga aaatggtctg atctttacgg
    22981 gagcacatga cccgcgtaaa ccaatcagtg aaaatgtaat gaacgcatc
//
LOCUS       DAJVUK010000053        22948 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.053, whole genome shotgun sequence.
ACCESSION   DAJVUK010000053 DAJVUK010000000
VERSION     DAJVUK010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22948
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.053"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(29..772)
                     /gene="fsr"
                     /locus_tag="OQQ57_001935"
                     /pseudo
     CDS             complement(29..772)
                     /gene="fsr"
                     /locus_tag="OQQ57_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fosmidomycin MFS transporter"
     gene            990..2642
                     /gene="ushA"
                     /locus_tag="OQQ57_001936"
     CDS             990..2642
                     /gene="ushA"
                     /locus_tag="OQQ57_001936"
                     /EC_number="3.1.3.5"
                     /EC_number="3.6.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HCS1956720.1"
                     /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDVEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQAPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     AQMKPDSGAYPQFANVSFVTKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
     gene            complement(2679..3158)
                     /gene="ybaK"
                     /locus_tag="OQQ57_001937"
     CDS             complement(2679..3158)
                     /gene="ybaK"
                     /locus_tag="OQQ57_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HCS1956721.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMAAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(3362..4156)
                     /locus_tag="OQQ57_001938"
     CDS             complement(3362..4156)
                     /locus_tag="OQQ57_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HCS1956722.1"
                     /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS
                     HDMTPLPTRLLKKLKNADALIVEADVSTSDTPFANLPTCEALEERINEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQITMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            4294..4635
                     /locus_tag="OQQ57_001939"
     CDS             4294..4635
                     /locus_tag="OQQ57_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HCS1956723.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSTL
                     INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            complement(4850..7354)
                     /gene="copA"
                     /locus_tag="OQQ57_001940"
     CDS             complement(4850..7354)
                     /gene="copA"
                     /locus_tag="OQQ57_001940"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HCS1956724.1"
                     /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTAEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGESVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALI
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNPALLNDQQVDTKAIEADISA
                     QASQGATPVLLAIDGKVVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            7616..8548
                     /gene="glsA"
                     /locus_tag="OQQ57_001941"
     CDS             7616..8548
                     /gene="glsA"
                     /locus_tag="OQQ57_001941"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HCS1956725.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAVVA
                     IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENIEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGLN
                     PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            8551..9843
                     /locus_tag="OQQ57_001942"
     CDS             8551..9843
                     /locus_tag="OQQ57_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1956726.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
                     GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            9968..10375
                     /gene="cueR"
                     /locus_tag="OQQ57_001943"
     CDS             9968..10375
                     /gene="cueR"
                     /locus_tag="OQQ57_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HCS1956727.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(10376..10834)
                     /locus_tag="OQQ57_001944"
     CDS             complement(10376..10834)
                     /locus_tag="OQQ57_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HCS1956728.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
     gene            complement(10831..11748)
                     /locus_tag="OQQ57_001945"
     CDS             complement(10831..11748)
                     /locus_tag="OQQ57_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HCS1956729.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            11894..12571
                     /gene="fetA"
                     /locus_tag="OQQ57_001946"
     CDS             11894..12571
                     /gene="fetA"
                     /locus_tag="OQQ57_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HCS1956730.1"
                     /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            12558..13337
                     /gene="fetB"
                     /locus_tag="OQQ57_001947"
     CDS             12558..13337
                     /gene="fetB"
                     /locus_tag="OQQ57_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HCS1956731.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAI
                     IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(13400..14254)
                     /gene="cnoX"
                     /locus_tag="OQQ57_001948"
     CDS             complement(13400..14254)
                     /gene="cnoX"
                     /locus_tag="OQQ57_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HCS1956732.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQMAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(14315..15124)
                     /gene="ybbO"
                     /locus_tag="OQQ57_001949"
     CDS             complement(14315..15124)
                     /gene="ybbO"
                     /locus_tag="OQQ57_001949"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HCS1956733.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            complement(15114..15737)
                     /gene="tesA"
                     /locus_tag="OQQ57_001950"
     CDS             complement(15114..15737)
                     /gene="tesA"
                     /locus_tag="OQQ57_001950"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HCS1956734.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            15708..16394
                     /locus_tag="OQQ57_001951"
     CDS             15708..16394
                     /locus_tag="OQQ57_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1956735.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            16391..18802
                     /locus_tag="OQQ57_001952"
                     /pseudo
     CDS             16391..18802
                     /locus_tag="OQQ57_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415029.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            19231..22948
                     /locus_tag="OQQ57_001953"
                     /pseudo
     CDS             19231..22948
                     /locus_tag="OQQ57_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415030.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
BASE COUNT         5289 a         6007 c         6489 g         5163 t
ORIGIN      
        1 actatcagta agttggagtc attacctagc tgctgatgct cgccatatag aaatatttcg
       61 agaaaatgag gattaacaga atgctgactg ccagtaccac tttgttgcgc ggcagtggat
      121 tgattatcgt cgctttgggt tttcctttat tcattcggtg ctgtgccgag taccaacggc
      181 taatttgcgc caacaccacg atcgccagca gtgccgcaag cacaaaccag gcaacgttgc
      241 ctttgccata aggcgcgata atcaccgccg tcagcaaggg tcccagggaa ctgccaaagt
      301 tgccgccgac ctgaaagata gattgcgcca ggccatgccg cccgccggaa gccatacggg
      361 ctacgcgaga agattccgga tgaaagaccg atgaactggt accgaccagc gccgccgcca
      421 gcagaactgc gccaacactg cccgccagcg caagcagcac cagaccactt aaggtaaagc
      481 acatgccaat tggcaacgac cacggcatcg gatatttatc ggtccagtag ccgaccactg
      541 gttgcagtag cgaagaggcg agctggaagg tgagggttat catgccaatc tgcataaatg
      601 tcagagaaaa ttctgactga agcagaggat aaatcgccag aatcagcgat tggatcatgt
      661 cgttcagcag atgtgagagg ctgatagcac ctaaaatacc aaacgatgtt cgggccttgg
      721 tcgttgacgc agccgcgccc gccacaggct gggtttgttc actcattgcc ataggaaagt
      781 cactttttca gggttgcgat gtaaagaatg atcttatttg tgattattac ccgactaaca
      841 tacctgtaag cgtcgcctga aggaagtctc aacgccgaat acagaatttc taatctggat
      901 gcagatttat cttcaccgga cgcagacttg tctattatgt tgcgtcatac tatttttcaa
      961 cacgttgaaa tcaggtcagg gagagaagta tgaaattatt gcagcggggc gtggcgttag
     1021 cgctgttaac cacatttaca ctggcgagtg aaactgctct ggcgtatgag caggataaaa
     1081 cctacaaaat tacagttctg cataccaatg atcatcatgg gcatttttgg cgcaatgaat
     1141 atggcgaata tggtctggcg gcgcaaaaaa cgctggtgga tggtatccgc aaagaggttg
     1201 cggctgaagg cggtagcgtg ctgctacttt ccggtggcga cattaacact ggcgtgcccg
     1261 agtctgactt acaggatgcc gaacctgatt ttcgcggtat gaatctggtg ggctatgacg
     1321 cgatggcgat cggtaatcat gaatttgata atccgctcac cgtattacgc cagcaggaaa
     1381 agtgggccaa gttcccgttg ctttccgcga atatctacca gaaaagtacc ggcgagcgcc
     1441 tgtttaaacc atgggcgctg tttaagcgtc aggatctgaa aattgccgtc attgggctga
     1501 caaccgatga cacagcaaaa attggtaacc cggaatactt cactgatgtc gaatttcgta
     1561 agcccgccga tgaagcgaag ctggtgattc aggagctgca acagacagaa aagccagaca
     1621 ttattatcgc ggcgacccat atggggcatt acgataatgg tgagcacggc tctaacgcac
     1681 cgggcgatgt ggagatggca cgcgcgctgc ctgccggatc gctggcgatg atcgtcggtg
     1741 gtcactcgca agctccggtc tgcatggcgg cagaaaacaa aaaacaggtc gattacgtgc
     1801 cgggtacgcc atgcaaacca gatcaacaaa acggcatctg gattgtgcag gcgcatgagt
     1861 ggggcaaata cgtgggacgg gctgattttg agtttcgtaa tggcgaaatg aaaatggtta
     1921 actaccagct gattccggtg aacctgaaga agaaagtgac ctgggaagac gggaaaagcg
     1981 agcgcgtgct ttacactcct gaaatcgctg aaaaccagca aatgatctcg ctgttatcgc
     2041 cgttccagaa caaaggcaaa gcgcagttgg aagtgaaaat aggcgaaacc aatggtcgtc
     2101 tggaaggcga tcgtgacaaa gtgcgttttg tacagaccaa tatggggcgg ttgattctgg
     2161 cagcccaaat ggatcgcact ggtgccgact ttgcggtgat gagtggagga ggaattcgtg
     2221 attctatcga agcaggcgat atcagctata aaaacgtact gaaagtgcag ccattcggca
     2281 atgtggtggt gtatgccgac atgaccggta aagaggtgat tgattacctg accgccgtcg
     2341 cacaaatgaa gccagattca ggtgcctacc cgcaatttgc caacgttagc tttgtgacga
     2401 aagacggcaa actcaacgac ctgaaaatca aaggcgaacc ggtcgatccg gcgaaaactt
     2461 accgtatggc gacattaaac ttcaatgcca ccggcggtga tggctatccg cgccttgata
     2521 acaaaccggg ctatgtgaat accggcttta ttgatgccga agtgctgaaa gcgtatatcc
     2581 agaaaagctc gccgctggat gtgagtgttt atgaaccgaa aggtgaggtg agctggcagt
     2641 aatccgaaag tgccggatat ttgcatccgg cacaatgctt aatcgcggcg ggcgatatca
     2701 gcaaatttgg catcgaggat cttcgccaga tcgcctgccg ccagttcgat atccagtccg
     2761 cgcttgccgc cagaaacata aatagtggca aattcttgtg cgggggcgtc gataatcgtc
     2821 ggcagacgtt ttttctgccc cagtgggcta atccccccaa ccaggtatcc cgtcgaacgc
     2881 tgcgcggcca tcggatcggc catctcaact ttcttggcac ccagcgcttt tgctactttt
     2941 ttaagatcca gttgacctgc gaccggcgta acggccactg ccagatgttt catatcaccg
     3001 ttcactgcca ccagtagcgt tttgtagact tgatccggat tcaaacctaa ttttttgacg
     3061 acttcatcgc caaaattggt ttcagccgga tcgtgctcgt aggtatggat ttgaaacgaa
     3121 atcttgtttt tttcgagtaa tttaactgcg ggtgtcatgg taattttcct gccttaaaca
     3181 aaaaaacgaa gcaagcatac gcctgatggc ggtccaaaaa aaagagtcat cttgcctaag
     3241 agtattggca ggatggtgag attgagcgac aatcgagtta caccgtcgct taaagtgacg
     3301 gcataataat aaaaaaatga aattcctctt tgacgggcca atagcgatat tggccatttt
     3361 tttagcgcaa catttgcggc aaattccctt ctccatacag gtgtagtgca ccgaccgcga
     3421 ccacatatcg ccccggcggc atggcgcgta atttatcccg ccaggcgaga tttcgctgat
     3481 gcatcagcac atcgtacagc gactgactga acgtattggg cagcgttata tcattatttt
     3541 gcggaggtgc attcagccac cagctcatca tttgttgcag caaccgtgcg ttggtatgcc
     3601 agtgggtcag cgtatcgtcc agcagcgcca gtcctttgtc agggagctgg agcaacatgg
     3661 taatctggtt ttcagcccct tccagttcaa tcacgggttt atgttgttgc ttcgccgcct
     3721 gcaataactg gtaatcgata ccgtattctg cccgcagccc cagtttttgt gcctgcgtcg
     3781 cctgaagaac catcgcgatt tgccacagcg gttgagtaga aaagagcgac ggagaaatgc
     3841 ccatctcctg gctaatgtgc tgcagatttt ggagttgctc ctcgttaatg cgctcttcca
     3901 gcgcctcgca agtaggcaaa ttagcaaaag gcgtatcgct ggtggaaaca tccgcctcga
     3961 cgatcagcgc atcggcgttt ttgagctttt tgagcaaacg ggtgggcagg ggagtcatat
     4021 cgtggctacc catatgaata ctgccaatca gatgaaaatg gcgattgccg ggaagggtga
     4081 tatcgatggc aggccaggtg taatgattac cgcgcagcgc ggcccaaagc gtttttaccc
     4141 ggtacaacag atccatacga cctccctttg tgaaatatca tgctagcgcg cggtgaggga
     4201 tggcgcaaat ggagttgggg acttgtttaa tgtgtttgta tgattcagta tgttcttgca
     4261 tcgctattca cagggaagca acagttaaaa accatgaaac aggcaacaag aaaaccgacg
     4321 acacccggag atattcttct ctatgaatat ctggaaccgc tcgatttgaa aatcaatgag
     4381 ttagcagagt tgctgcatgt tcatcgtaat agcgtcagta cactgatcaa taataatcgt
     4441 aaactcacca ctgagatggc attccgtctg gcgaaagttt ttgataccac agtcgatttt
     4501 tggctaaacc tccaggcggc agttgatctt tgggaagttg aaaacaacat gcgcacccag
     4561 gaagaattgg gacggattga aacagtggct gaatatttgg cacgccgtga agagcgtgca
     4621 aaaaaggtcg cgtaaggcca aaacatcgct tcatctcgta ggccggataa ggcgttcacg
     4681 ccgcatccgg catccgagca ccattgcctg atgcgacgct tacccgtctt atcaggccta
     4741 caaacctgtg cctgaaccgt aggccggata aggcgtttac gccgcatccg gcagtcatgc
     4801 gtcgatgcca aatgcgccgc cctaaagcag cgcatccgca atgacgtact tattccttcg
     4861 gtttaaaccg cagcaaccgg ttggcgttac tcactacggt aatcgacgag agcgccattg
     4921 ccgctccggc aactaccggg ttaagcagtg ttccagtaaa cggccacaaa ataccagcgg
     4981 cgaccggaat accaatgctg ttgtagataa acgcaccgag caggttctgc ttcatattgc
     5041 gcagcgttgc gcgggaaatc gcgagcgcat ctgcaacacc catcaggcta tggcgcatca
     5101 gggtaatcgc cgcggtttca atggcaacat cactgccgcc acccatcgca ataccgacat
     5161 ccgcctgagc cagcgctggc gcgtcgttaa tgccgtcgcc caccattgcc acctgacgtc
     5221 cttcactttg cagacgtttg atcgcttcgg ctttaccgtc tggcagcacc ccggcgatta
     5281 cctcatcaat ccctgcttct ttggcgatcg cattggcggt ggttgggtta tccccggtca
     5341 acatcaccag acgatatccc gctttatgca ggcgttgcag cgccgccacg ctatcactac
     5401 gcaacggatc gcgtacagcc agcagggcta ctactttccc gtcaatcgcc agcagcacag
     5461 gcgttgctcc ttgcgatgcc tgagctgaaa tatcggcttc aatcgcttta gtatcgactt
     5521 gctggtcatt taacagcgcc ggattaccca gcaataacgc atgaccttca gcttcaccgc
     5581 ttacgcccag cccgcgcaat gtgcggaaac cgttgacctg cggcagctgc atatcgcctg
     5641 ctttatcgag gatcgctcgt gccagcggat ggctggaacc ttgctccagc gccgccgcca
     5701 gacgcaatgc ttgcgcttca tcaacatcag caaatgtttt tactgcgaca acctgcggct
     5761 tcccttcggt cagcgtcccg gttttatcga acacgacggt atcgagtgta ctggcgcgtt
     5821 gcagcgcgtc ggcgtcccgc accagcacgc caaactcagc cgcccgcccg acgccggaaa
     5881 taatcgacat tggcgtcgcc agccccagcg cacacggaca ggcaataatc agcaccgtgg
     5941 tggctatcac cagggtatag acaatctgcg gtgccggacc aaagaaatac cagattgctg
     6001 cactgatcag cgcaatcacc actactaccg gcacaaatac ggctgagatt ttatccgcca
     6061 gctgaccgat ttctggcttg ctgctctggg cctggcgcac catgcgaata atccttgaca
     6121 gcgtggtatg gctgccaacc gcactggcgc gaaatagcac gctaccgtcc tgtaccactg
     6181 tcccggcatg gacgctttcg ccttcgcctt tttgctgcgg gattggttcg cccgtcagca
     6241 tcgcttcatc cagccatgct tcgccctggg taatctcgcc atctaccggc acgcgatcgc
     6301 cggtcgtcag gcgcagtaac atccctggct gaacttccgc cagcggcacg cttttttcac
     6361 cctctgcggt gaccactcgc gccgtcggtg gggttaaatc gagtaatttc tccagcgcct
     6421 tagaagaacg ctgacgcgcg cgcgcttcca gcatatggcc gagattaatc agaccgataa
     6481 tcatcgcact ggcttcatag taaagatgcc gcgcttccat cgggaaccac tgcggccaca
     6541 ggttgacgct catcgaatag agccacgcca cacccgtacc cagcgccacc agcgtatcca
     6601 tcgtcgccgc accgttcagc aggcttttcc acgcgctgcg gtaaaaatgc ccgccggcga
     6661 aaaccattac cgccagggtt atcaggccga taactaacca caggctgcgg ttgtcagcgg
     6721 tgaccatcat gttatcgccg atcatccccc agaccattac cggaataccc accgccagtg
     6781 cgacaatcgc ctgccagcgg aagcgcttca tcgtagcgac ggcggtttcc tgctggcgct
     6841 cgcggcgttt cgcgtcatct tcaatcgctt ccgcgccgta gcccgctttt tccaccgcct
     6901 gcactaaatc ttgtggggag gcactgccca tcaccagcgc agtacgctcc gccaggttta
     6961 cccgtgcctg agtgacgccc ggtacgcttt gcagcgcatt ttgtacgcgg gtgacacagc
     7021 tggcgcagct catgccgctc agcagcaact gctggctgtc atcgtcatcg gcggtcgctg
     7081 ccggaagcgc ctcagaaacc gctgtcagtg cttccgacgg gattgatgac tccgccagcg
     7141 gtttagcctt tgggtggctt acagatgcgt cataacccgc ttgtttgatg gtttcgatca
     7201 gctgttctgc actggcagtc ccggtaacgt gcgcttcagt gatagacaca tccgcttgtt
     7261 ccacatccgg gcgctgttcg agactttctt tcacgcgttt aacgcagtga ccgcaggaca
     7321 ggccgtccag ggtcaggtcg atagtttgtg acataaaaca ctcctttaag acagttttga
     7381 ctggctgtga taaaggttaa accttccagc aaggggaagg tcaagaaatt aataaaccag
     7441 gcgggtaaaa gtccgtaaag attaaaaaat cggctcgatt tgcatcagga ttagacattt
     7501 atttctttgt tttcctgtag ttaagttgct ggtgctaagt taaatcagga tgcctgaaaa
     7561 tcggcaccgg ggtgaggaat tacctcccgc atctataaaa aggagttaac aaaagatgtt
     7621 agatgcaaac aaattacagc aggcagtgga tcaggcttac acccaatttc actcacttaa
     7681 cggcggacaa aatgccgatt acattccctt tctggcgaat gtaccaggtc aactggcggt
     7741 agtggctatc gtgacctgcg atggcaacgt ctatagtgcg ggtgacagtg attaccgctt
     7801 tgcactggaa tccatctcga aagtctgtac gttagccctt gcgttagaag atgtcggccc
     7861 gcaggcggta caggacaaaa ttggcgctga cccgaccgga ttgcccttta actcagttat
     7921 cgccttagag ttgcatggcg gcaaaccgct ttcgccactg gtaaatgctg gcgctattgc
     7981 caccaccagc ctgattaacg ctgaaaatat tgaacaacgc tggcagcgaa ttttacatat
     8041 ccaacagcaa ctggctggtg agcaggtagc gctctctgac gaagtcaacc agtcggaaca
     8101 aacaaccaac ttccataacc gggccatagc ctggctgctg tactccgccg gatatctcta
     8161 ttgtgatgca atggaagcct gtgacgtgta cacccgtcag tgctccacgc tcatcaatac
     8221 tgttgaactg gcaacgcttg gcgcgacgct ggcggcgggt ggtctgaatc cgctgacgca
     8281 taaacgcgtt cttcaggccg acaacgtgcc gtacattctg gccgaaatga tgatggaagg
     8341 gctgtatggt cgctccggtg actgggcgta tcgcgttggt ttaccgggca aaagcggtgt
     8401 aggtggcggt attctggcgg tcgtccctgg cgtgatggga attgccgcgt tctcaccacc
     8461 gctggacgaa gaaggtaaca gtgttcgcgg tcaaaaaatg gtggcatcgg tcgctaagca
     8521 actcggctat aacgtgttta agggctgatc atgatgaaca cggaaggtaa taacggtaac
     8581 aaacccctcg gtctatggaa tgtcgtttcc atcggtattg gggcaatggt gggggcgggg
     8641 atcttcgcgc tgctggggca ggctgcgttg ctaatggaag cctcgacctg ggtcgccttt
     8701 gcttttggcg gtattgtggc gatgttttcc ggttatgcct atgcgcgtct gggggcgagc
     8761 tatcccagca atggcggcat tatcgacttc tttcgtcgcg gattaggcaa cggcgtcttt
     8821 tcgctggcgc tctcgttact gtacctgttg acgctggcgg tgagcatcgc catggtcgcc
     8881 catgcttttg gcgcttatgc cgtgcagttt ttgcatgaag gcagccagga ggagcacctt
     8941 attttgctct acgcgttggg gagcattgcg gtgatgacgc ttttcaactc cttaagcaac
     9001 catgcggtag ggcggctgga agtgatcctc gtcggcatta aaatgatgat cctgttattg
     9061 ctgattattg ccggtgtctg gtcgctgcaa ccagcgcata tttccgtctc tgcgcccccc
     9121 agctccggtg cgttcttctc ctgtattggg ataactttcc ttgcctatgc gggctttggc
     9181 atgatggcga acgcggcgga taaagtgaaa gatccgcagg tcattatgcc acgggcgttt
     9241 ctggtggcga ttggcgttac cacgttgctt tatatctcgc tggcactggt tttgcttagc
     9301 gatgtatcgg cattagagtt agaaaaatat gccgataccg ccgtagcgca ggctgcttct
     9361 ccgctgctcg gacatgtggg ttatgtgatc gtcgtcatcg gcgctttact ggcgacggct
     9421 tcagccatta acgcgaacct gttcgccgtg tttaacatca tggacaacat gggcagcgaa
     9481 cgcgaactgc cgaagctaat gaataaatcc ctgtggcggc agagtacctg gggcaacatc
     9541 attgtcgtgg tgttgattat gctgatgacg gcggcactga atttaggctc actcgccagc
     9601 gttgccagcg ccaccttttt gatttgctac ctggcggtgt ttgtggtggc gatccgcctg
     9661 cgtcatgata ttcacgcctc gttgccgatt cttatcgttg gtacgttggt gatgttgttg
     9721 gtgatcgttg gctttatcta cagtctgtgg tcccagggta gccgtgcgtt gatatggatt
     9781 attggctcac tcttactcag ccttattgtg gcaatggtca tgaagcgcaa taaaaccgta
     9841 taacatctct ctgtgcgcag tacttcctgt attattgtgg tggcggtcga tattcgcact
     9901 ggcaaaaaaa cgtgcttgaa tatctgttga aaccctttaa caaagcacag gaggcgttgc
     9961 gcgaacgatg aacatcagcg atgtagcaaa aattaccggc ctgactagca aagccattcg
    10021 cttctatgaa gagaaggggc tggtgacgcc gccgatgcgc agcgaaaacg gttatcgcac
    10081 ctacacgcag cagcatctca acgaactgac cttactgcgc caggcacggc aggtgggctt
    10141 taacctggaa gagagcggcg agctggtgaa tctgtttaac gacccgcagc ggcacagcgc
    10201 cgacgtcaaa cggcgcacgc tggagaaggt ggcggagatc gaacgacaca ttgaggagct
    10261 gcaatccatg cgcgaccagc tgctggcact ggcgaatgcc tgccctggcg atgacagcgc
    10321 cgactgcccg attatcgaaa atctctccgg ctgctgtcat catcgggcag ggtgattaag
    10381 acgagacggc tcggatatgt agggttatcc cttctatcgc aatgacttca acatgcgtac
    10441 ctgcaccgag atcctcgctg gcgctgacag gccatgaact gtcaccgacg cgcatatgac
    10501 cgcgcccgtt gaccagcgga gattccagca caaaacgtcg gccaatcagc tgctgcccgc
    10561 gctggtttaa atgactatcg ctgtgctttt gttcgcgcac ccgccgcgac aaccatttcc
    10621 accacagcca ggcggcgagc agcgtcagga tggcaaacat taccccttgc cactcccaac
    10681 ccagcggcac cagccagacc accaggccgg taatcaccgc tgccacgccg ctccacaaca
    10741 aataaccatt tccgcccagc atctcggctg ccagcagcaa accgccgaga ctgagccaga
    10801 aaatatgtgg atgaacgacc attaactcca tcatggctga gtccgtttgt tggcgctgtc
    10861 tttcaccagt tcggcaatcc cggcaatcga ccccatcagg ctgctggcct ctaatggcat
    10921 catcactact ttgctgttac tggaggaacc gatctgctgt aacgcttcgg tgtatttctg
    10981 cgctacgaag tagttcaccg cctgaatatc accggaggcg atagcttcag acaccatttt
    11041 ggtggcgcgg gcttctgctt cggcggaacg ttcacgcgct tcagcctgta aaaacgccga
    11101 ctgacgttcg ccttccgctt tcaggatttg cgactgtttt tcaccttcgg ctttgaggat
    11161 ttccgcctga cggatccctt ccgcttcaag aatgtaagcg cgtttggtac gttccgcttt
    11221 catctgcgcg ttcattgaag agataagctc tgccggtggg cgcacgtcgc gaatttcaat
    11281 acgggtgact ttaatccccc acgggttggt ggcttcatcg acaatacgca gcaggcgtga
    11341 gttgatgctg tcgcgctgag agagcatttc gtcaagttcc attgaaccca acacggtacg
    11401 gatgttagtc atggtcaggt tgatgatcgc cagctccaga ttgctgactt cataggcagc
    11461 gcgtggcgcg tcaatcacct gaataaaaca gactgcgtcg atggtaacgt tggcgttatc
    11521 tttcgagata acttcctggg aagggatatc gagcacttgc tccatcatat tgatcttgcg
    11581 accaatgcga tccataaacg gcaccaccag actgagcccc ggctgtaacg ttttggtata
    11641 gcgaccaaaa cgttctaccg tccattgata gccctgcggc acgattttga cgcccgcgcc
    11701 gacaatgacc agcgcgacaa aaatgagaat cgggataaag ataagcatcg gaaaaacctc
    11761 ctgttgtacc gtccataatc agcaaaattg ctgcttgatt aaacaaatta tacctgatta
    11821 ctgaaagaga gttccccctt attcctgcga aggataaact gtttttagta aaaatcagaa
    11881 aaagggaaca gcgatgcagg aaaatagtcc tttgcttcag ctacaaaacg taggatatct
    11941 ggcgggtgat gcgaagattc ttaataacat caatttttcg ctgcgtgctg gcgaatttaa
    12001 gttaattacc ggtccttctg gttgtggcaa aagtacgctg ctaaaaatag ttgcttcatt
    12061 gatcagccca accagcggaa cgttactgtt tgaaggtgag gatgtcagca cactaaagcc
    12121 agaaatctac cgccaacaag tctcttactg cgcccagaca ccgacgctgt ttggcgatac
    12181 ggtatacgat aatctgatct ttccctggca gatccgtaac cggcagcctg acccagccat
    12241 ttttctcgat tttctcgaac gcttcgcctt gccggacagc attttgacga aaaatatcgc
    12301 cgagctatct ggtggtgaaa aacaacgcat ctcactgatt cgtaacctgc aatttatgcc
    12361 gaaggtttta ttgctggatg aaatcaccag tgcgctggat gaaagtaata aacataacgt
    12421 taatgagatg atccatcgtt atgtgcgcga gcaaaatatt gccgtgctgt gggtgacaca
    12481 cgataaagac gaaattaatc atgcggataa agtgattaca ctgcaaccgc atgccggaga
    12541 aatgcaggaa gcacgctatg aactcgcata atattactaa cgaatcattg gcactggcat
    12601 taatgctggt ggtggtggca atcttaatta gccataaaga aaaactggcg ctggagaaag
    12661 atattttctg gagcgtcggg cgcgcgataa ttcagctgat tattgtcggc tatgtgctga
    12721 agtatatttt cagcgtggat gatgccagcc tgacattatt gatggtgtta tttatctgct
    12781 ttaatgcggc gtggaacgcg caaaaacgca gtaaatatat tgctaaagct tttatctcat
    12841 cgtttattgc cattacggtt ggggcgggaa ttaccctggc ggtgctgatt ctctcagggt
    12901 cgattgaatt tatcccgatg caggtgatcc ctatcgccgg gatgattgcc ggtaacgcca
    12961 tggtagcggt ggggttgtgt tacaacaatt tagggcaacg ggtcattagc gaacagcaac
    13021 agattcagga gaaactgagt cttggcgcga cgccgaagca ggcttcagcg atattgattc
    13081 gcgacagtat tcgcgcggct ttaattccga cggtcgattc agcaaaaacg gttggcttag
    13141 tgagtttacc aggaatgatg tccgggctga tatttgccgg gattgatccg gtgaaggcga
    13201 ttaaatatca gattatggtg acctttatgc tgctctcaac cgccagcttg tcgaccatta
    13261 ttgcctgcta tttaacctat cgtaagtttt ataattcgcg ccaccagttg gtggtgacgc
    13321 aattgaagaa gaaatgatgc gatgccggat gcgcagcatc gcatccggcg ttgtggttca
    13381 tgtgccgaac aacggaatat caatacaaca atgcatacag ctggcggcga tacttcgacg
    13441 ccagtgcatc acccgtaccc agcgcagcga ggatctcctg gaacgtttta cgcgtctgac
    13501 cgtctgcggc ggtgagatct ttacgcagat gcccgaacag caactccagc gcctcttcat
    13561 tgcgcccaac ctgatgcagt tgcagcgcca gttgcgtcgc cagtgcggca tcttctggat
    13621 tctccgccat ctgctgttgc aactgttgaa tttccggcgt atcagccgcc tgcttcagca
    13681 gttcgatttg cgccaccagc ccctggtagc gggtgtcctg atcctgcaac ggaatggttt
    13741 tcagcaccgc ttccgcatct tcagaacggt tcagcgcaat cagcgtttct gccagcagca
    13801 ggccgatctc cccgttctga ttcgacaact gccaggcgtc tttcagcaat ggcagggcat
    13861 cggtgtaatt gccttcctgc atcagttgca tcgcctgctg cgctttcagc tcttcttcgc
    13921 gcggcagcac tttatccagc agggcgcgga tcgcctcttc cggttgcggc ccctggaagc
    13981 catctaccgg ttgcccgttc tggaacagat acacggtcgg aatcgcgcgc agaccaaact
    14041 gggcggcaat catctgctcc gcgtcgcagt ccagcttcgc cagaataaat tgcccgttgt
    14101 actgcgccgc gaggctttcc aggatcgggg ttaactgcaa acagtgctgg ctacgttcag
    14161 accaaaaata gaacagcacc ggagtggtca tcgactgttc aagaacctgt tgcaggttag
    14221 attcgttaat gttgacaata ttttctacgg acatggagtc gctctctgtt gtcgatattt
    14281 tctttgacat gggggcttaa gcgcgcgctt caactcaccc ctgcaatatt ttgtccatca
    14341 cgcgcccagg cagcaggcgc ttgagcacca ttactgccca ggtcaccagc gttaccggat
    14401 agcgcatctt cggcttctcg ctaataaaag catggcgcac tttgtcgacc accgcttccg
    14461 gtcccaacgt aaagcgggcg gcgatgccgg gattttcgac tggtttatca ctttgcgtct
    14521 ggttgacgtt gtcggtgaag cgagtacgaa tgggaccggg ttcgatcagg ctgactttaa
    14581 ttccgctgtg gcgtagctcc atgcgcagcg cgtctgacca cgcctccagc gcatatttac
    14641 tggccgcgta agcgccacga cccggcgtgg agattaatcc catcaccgat gatgtcatca
    14701 caatacgccc ttcaccgtgc ggtaacatcg cgggtaacag gcgcatggtg agctggtgtg
    14761 cgccgaaaaa gttggcggaa aactgctgtt ccatctgcgc acggctgatg gtggaaaggg
    14821 ggccatacat gccgaatccg gcattgttaa agatcccata cagacaatta tcggtcaggg
    14881 cgatcacctc gtctgctgcg cgatcaacac tttctggtga atccagatcg atcaacacgc
    14941 cggtaaatcc catgttgttc atacgctcaa catcatccgg ttttcggcaa cctgccagca
    15001 catgaaaacc ctggcgtttt aattcgagcg cgctttccag gccaattcca ctggaacatc
    15061 cggtaattaa gaccgatttt tgcataactt tacctgtcag gatctccgtt gctttatgag
    15121 tcatgattta ctaaaggctg caactgcttc gccatccagt cggcaataaa cggctgggcg
    15181 tcgcggttgg gatgaatacc gtcatcctgc atccattgtg gcttgaggta gacctcttcc
    15241 ataaaaaagg gcagcagcgg aacatcaaac tctttggcga gtttggggta aatggcgcta
    15301 aaggcttcat tataacggcg accatagttt gcaggcagac gtatttgcat taacaatggt
    15361 tcagcgttgg cggctttgac atcctgcaaa atctggcgca gcgtttgctc ggtttgctgt
    15421 ggctgaaaac cacgcaaacc gtcattgccg cccagttcaa ccagcaccca gcgcggctga
    15481 tgctgtttca gcagagccgg aaggcgcgcc agtccttgtt gcgaggtgtc gccgctgatg
    15541 ctggcattaa ctaccgacgt tttactctgc cacttatcat tcaacaaggc aggccaggcc
    15601 gcgctggcag acattcgata cccggcgctc aggctatcac ccagaatcaa taacgtgtcc
    15661 gctgcggcgg cacggaaggt taacaggacc aggaacagga agggcaaatg ccagcggaaa
    15721 acattgttga agttcatcat cttaagaagt ccgtcggtca gggggagcat gaactctcca
    15781 tcctcaccgg agttgagctg gttgtcaaac gtggcgagac catcgcactg gtgggcgagt
    15841 cgggatcggg taagtcaacc ttgctggcga tcctcgccgg gcttgatgac ggcagcagtg
    15901 gcgaagtgag tctggtggga caaccgctac ataatatgga cgaagaagcg cgggcaaagt
    15961 tgcgcgcgaa gcacgtcggc tttgtttttc agtcatttat gttaattcct acccttaacg
    16021 cgctggaaaa cgtcgagctt ccggctctgc tgcgcggtga gagtagcgcg gaaagtcgta
    16081 acggggcgaa agcgttgctc gaacagttag ggctgggtaa acgtctggat catcttccgg
    16141 cacagctttc cggcggtgaa cagcaacgag tggcgctggc acgagccttt aatggtcgac
    16201 ctgatgtgct gtttgccgac gaacccaccg gcaaccttga ccgccagacg ggcgataaaa
    16261 ttgccgacct gctgttttcc ctcaaccgtg aacatggcac cacgttgatt atggtgaccc
    16321 acgacctgca actggcggca cgctgcgacc gctgcttacg gctggtgaac gggcagttgc
    16381 aggaggaagc atgattgcac gttggttctg gcgcgaatgg cgttcgccgt cgctattaat
    16441 tgtctggctg gcgctaagcc tggcggtggc ctgcgtgctg gcgctgggca atatcagcga
    16501 tcgcatggag aagggcttaa gccagcaaag ccgtgagttt atggcgggcg atcgggcgtt
    16561 gcgcagttca cgcgaagtgc cgcaagcgtg gctggaggaa gcgcaaaagc gcggcctgaa
    16621 agtcggcaag cagctgactt tcgccacaat gacctttgca ggcgacacac cgcagctggc
    16681 gaacgtcaaa gcggtggatg atatctaccc gatgtatggc gatctgcaaa ctaatccccc
    16741 tggcctgaaa ccgcaggcgg gcagcgtatt gctggcccca cgcctgatgg cactgcttaa
    16801 cctgaaaacg ggcgacacca ttgacgtggg cgatgccacc ttgcggattg ccggagaagt
    16861 gattcaggaa ccggattccg gttttaaccc cttccagatg gctccgcgtc tgatgatgaa
    16921 tctggcggat gtcgataaaa ccggagccgt gcagccgggg agtcgggtca cctggcgtta
    16981 taaattcggc ggcaacgaga accagctcga cggctatgag aaatggttgt tacctcagct
    17041 taaacccgaa caacgctggt acggtctgga acaggacgaa ggcgcgctgg ggcgatcgat
    17101 ggaacgctcg caacagttcc tgctgctttc ggcgcttctg accttgctgc tggcagtggc
    17161 agcggtggcg gtagcgatga atcattactg tcgcagtcgc tacgatctgg tggcgatcct
    17221 caaaacgctg ggggcagggc gagcgcaact gcgtaagcta atcgtcggtc agtggttgat
    17281 ggtgctgacg ctttcagccg ttaccggtgg ggccataggc ctgttgttcg aaaacgtgtt
    17341 gatggtgctg ctcaagcccg ttctgcctgc tgcactaccg ccagccagcc tctggccgtg
    17401 gctgtgggcg cttggcacca tgacggtcat ctcgctgctg gtggggctac gaccataccg
    17461 cttgttgctg gcaacgcagc ctttacgcgt attacgtaat gatgtggtag cgaacgtctg
    17521 gccgctgaag ttttatctgc cgattgtcag tatggtggtt gtgctgctgc tcgccggatt
    17581 aatgggtggc agcatgctgc tttgggcggt gctggcgggc gcggtagtac tggctttgct
    17641 gtgcggtgtg ctgggctgga tgcagctgaa tgtactttgc cgcatgacgc tgaaatcgct
    17701 acctctgcgc ctggcggtta gccgcctgtt acgtcagccg tggtcaacgt taagccagct
    17761 ttcggcattt tcgctctcct ttatgctgct ggcgctgttg ctggtattgc gttgcgatct
    17821 gctcgaccgc tggcagcagc taccgccaga aagcccgaac tactttttaa ttaacatcgc
    17881 cacagaacag gtagcaccgc taaaagcgtt cctcgcggaa catcatatag tcccggaatc
    17941 attttatccg gtagtgcggg cgcggctgac ggcgattaac gataagccga cagaaggtaa
    18001 tgaagatgag gcgcttaatc gcgaactcaa tcttacctgg caaaatacgc ggcccgatca
    18061 taatccgatt gtcgccggta actggccgcc aaaagccgat gaagtgtcga tggaagaggg
    18121 gctggcgaaa cgcttaaacg ttgccctcgg tggtaccgtg acttttatgg gcgataccca
    18181 ggagttccgc gctaaagtga ccagcctgcg caaagtggac tgggaaagtc tgcggcctaa
    18241 tttctatttt attttcccgg aaggggcatt agacgggcaa ccgcagagct ggcttaccag
    18301 tttccgctgg gagaatggca acggcatgtt gacgcaactc aaccgccagt tcccgaccat
    18361 tagcctgtta gatattggcg cgattttaaa acaggtcggt taggtgctgg agcaggtaag
    18421 tcgggcgctg gaggtgatgg tggtgctggt caccgcctgc ggtatgttgc tgttgctggc
    18481 acaggtgcag gtgggaatgc gccagcgtca tcaggagctg gtggtatggc gcacactcgg
    18541 tgcggggaaa aaactgctgc gcacgacatt gtggtgtgag ttcgccatgc ttgggtttgt
    18601 ttccggcctg gtggccgcaa ttggtgcgga aacggcactg gcagtgttgc aggcgaaagt
    18661 gtttgatttc ccgtgggagc cagactggcg attgtggatt gttctgccgt gcagcggtgc
    18721 gctgctgctg tcgcttttcg gcggctggct gggtgcgcga ctggttaagg gtaaggcgct
    18781 gttcaggcag tttgcggggt gatgagagta aataaggggc gttctggttg aatggaacgc
    18841 cttgtttaaa ttaattctac aatatgtttc attgatgatg ttattgaatt ggtgatttcc
    18901 tatctttcta ttgctgatat taatctgaat tggtggagtt taataatttt aaatatagcc
    18961 ctacaaaaat aactcagact aataaaatca taaatcatat gcgttgaatg gatattatcc
    19021 atatagtgaa tttgttgatg atgaattcat ctgtgctaaa aattttagtt taataaaata
    19081 ttgaaagtga cctgtaataa cagttattgt tgattgagaa caaataagtt tatgtgaaaa
    19141 atatataaat acattagctg gtcatgtgtg tcattttatt tttttgttgc taacacaggg
    19201 atatgaacaa taactaaaag ggcactttat atgagcggaa aaccagcggc gcgtcaggga
    19261 gatatgactc agtatggcgg tcccattgtc caggggtcgg caggtgtaag aattggcgcg
    19321 ccaactggcg tggcgtgctc ggtgtgtccg ggcgggatga cctcgggcaa cccggtgaac
    19381 ccgctgctcg gtgcaaaagt acagcccggc gagacggacc ttgcgctgcc cgacccgctg
    19441 ccgttcattc tctcccgcac ctacagcagc taccggacga agacgcctgc gccagtggga
    19501 actttttggc cccggctgga aagcgccttc tgatatccgc ttacagatac gcgatgatgc
    19561 actggtactc aacgacaacg gcgggcggag cattcacttt gagccgctgc tgccggggaa
    19621 ggctgtgtac agccgcagtg agtcaatgtg gctggtgcgt ggcggtaagg cagcgcagcc
    19681 ggacggccac acgctggcac gactgtgggc gtcgctgccg ccggatatcc ggttaagccc
    19741 gcatctttac ctggcgacca acagcgcaca ggggccgtgg tggatactgg ggtgatctga
    19801 gcgggtgccg ggtgctgagg acgtactgcc agcgccgctg ccgccgtacc gggtgcttac
    19861 cgggatggcg gaccgcttcg ggcggacgct gacgtaccgg cgtgaggccg caggcgacct
    19921 ggccggggaa atcaccggcg tgacggacgg tgccgggcgg gagttccgtc tggtgctgac
    19981 cacacaggcg cagcaggcgg aagaggcccg gcagcaggcg gtcgtcgccg gagcaaaacg
    20041 accggacatt cctgattcac tgccggagag cacagagtac ggccccgaca ggggtatccg
    20101 cctttcggcg gtgtggctga tgcacgaccc ggcatacccg gagagcctgc ccggtgcgcc
    20161 actggcgcgg tacacgtata cggaagccgg tgaactgctg gcggtatatg accgcagcaa
    20221 tacgcaggtg cgcgctttca cgtatgacgc gcagcacccg ggccggatgg tggcgcaccg
    20281 ttacgcggga aggccggaga tgcgctaccg ctacgacgat acggggcggg tggtggagca
    20341 actgaacccg gcagggttaa gctaccgcta tctttatgag caggaccgca tcaccgtcac
    20401 cgacagcctg aaccggcgtg aggtgctgca tacagaaggc ggggccgggc tgaaacgggt
    20461 ggtgaaaaaa gaactggcgg acggcagcgt cacgcgcagc gggtatgacg cggcaggaag
    20521 gctcacggcg cagacggacg cggcgggacg gcggacagag tacggtctga atgtggtgtc
    20581 cggcgatatc acggacatca ccacaccgga cgggcgggag acgaaatttt actataacga
    20641 cgggaaccag ctgacggcgg tggtgtaccc ggacgggctg gagagcagcc gggaatatga
    20701 tgaaccgggc aggctggtat cggagacatc gcgcagcggg gagacagtac gctaccgcta
    20761 cgatgacgcg cacagtgagt taccggcgac gacaacggat gcgacgggca gcacccggca
    20821 gatgacggcg gttcaccgcg aggaaggtat cagcctttac cgccactatg acaaccgtgg
    20881 ccggttaacc tcggtgaaag acgcacaggg ccgtgaaacg cagtatgagt acaacgccgc
    20941 aggcgacctg actgccgtta tcaccccgga cggcaaccgg agcgagacac agtacgatgc
    21001 gtggggaaag gcggtcagca ccacgcaggg cgggctgacg cgcagtatgg agtacgatgc
    21061 tgccggacgt gtcatcagtc tgactaacga gaacggcagt cacagcgact tcagctacga
    21121 tgcgctggac cggctggtac agcagggcgg ctttgacggg cggacgcaac gttatcatta
    21181 tgacctgacc ggaaaactca cgcagagtga ggatgagggg cttgtcaccc tctggcacta
    21241 cgatgcgtcg gaccgcatca cgcaccggac ggtgaacggc gacccggcag agcagtggca
    21301 gtatgacggc cacggctggc tgagagaaat cagccacctg agcgaaggcc accgtgtcgc
    21361 tgtccactac ggctacgacg ataagggccg cctgacgggc gaacggcaga cggtggagaa
    21421 cccggagacg ggggaactgc tgtggcagca tgagacgaaa cacgcctaca acgaacaggg
    21481 gctggcaaac cgcgtcacgc cggacagcct gccgccggtg gagtggctga cctacggcag
    21541 cggttacctg gcgggcatga agctgggcgg gacgccgctg gtcgagtata cgcgggacag
    21601 gctgcaccgt gagacggtgc gcagcttcgg cagcatggca ggcagtaatg ccgcatatga
    21661 actgaccagc acatacaccc ccgcaggcca gttacagagc cagcacctga acagcctggt
    21721 gtatgaccgt gactacgggt ggaatgacaa cggcgacctg gtgcgcatca gcggtccgcg
    21781 acagacgcgg gaatacggct acagcgccac gggcaggctg gagagcgtgc gcaccctcgc
    21841 accggacctg gacatccgca tcccgtatgc gaccgacccg gcgggaaacc ggctgccgga
    21901 cccggagcta cacccggaca gcacgctcac ggcgtggccg gataaccgca tcgcagagga
    21961 tgcgcactat gtttaccact atgatgaata cggcagactg acggagaaga cggaccgcat
    22021 cccggcgggt gtgatacgga cggacgacga gcggacccac cactaccact acgacagcca
    22081 gcaccgcctg gtgttccaca cgcggataca gcatggcgag ccactggtcg agagccgcta
    22141 cctctacgac ccgctgagcc gccggacggg gaaacgggtg tggcgtcgcg agcgtgacct
    22201 gacggggtgg atgtcgctgt cgcgtaaacc ggaggtgacg tggtacggat gggacggcga
    22261 ccggctgacg acggtacaga ccgacaccac gcgtatccag acggtatacc agccggggag
    22321 cttcgcgccg ctcatccgca tcgaaacaga caacggtgaa cgggagaaag cgcagtgccg
    22381 cagcctggcg gagaagttac agcaggaagg gagcgaagac ggtcacggtg tggtgttccc
    22441 ggctgaactg gtggggctgc tggacaggct ggagggggaa atccgggcaa actgcgtgag
    22501 cagtgaaagc cgccagtggc ttgcgcagtg cgggctgacg gtggagcggc tggcggcaca
    22561 gatagagccg gtttatttgc ctgagcgaaa aatacatctt tatcactgtg accaccgggg
    22621 cctgccgctg gcgcttatca gtgaagacgg caatacggcg tggagcgcgg aatatgatga
    22681 atggggcaac cagcttaatg aggagaaccc gcatcacctg caccagccgt accggctgcc
    22741 ggggcagcag tatgataagg agtcggggct gtactacaac cggaaccggt actacgatcc
    22801 gttgcagggg cggtatatca ctcaggaccc gatagggctg gaggggggat ggagtctgta
    22861 tgcgtatccg ctgaatccgg tgaatggtat tgatccatta gggttaagtc ccgcagatgt
    22921 agcgctaata agaagaaaag atcaacta
//
LOCUS       DAJVUK010000054        22864 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.054, whole genome shotgun sequence.
ACCESSION   DAJVUK010000054 DAJVUK010000000
VERSION     DAJVUK010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22864
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.054"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            39..968
                     /gene="aaeR"
                     /locus_tag="OQQ57_001954"
     CDS             39..968
                     /gene="aaeR"
                     /locus_tag="OQQ57_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HCS1956736.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
     gene            complement(1096..2541)
                     /gene="tldD"
                     /locus_tag="OQQ57_001955"
     CDS             complement(1096..2541)
                     /gene="tldD"
                     /locus_tag="OQQ57_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HCS1956737.1"
                     /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVGHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVRGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(2697..6497)
                     /gene="yhdP"
                     /locus_tag="OQQ57_001956"
     CDS             complement(2697..6497)
                     /gene="yhdP"
                     /locus_tag="OQQ57_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein YhdP"
                     /protein_id="HCS1956738.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFHLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDDVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKLLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWQPAKTGVLPAAVNEALSGSVAWDGKVGIDLPYHAGATYNVELNGDLNNV
                     SSHLPSPLAKPAGEPLPVNVKVDGNLSSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDLTISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            complement(6565..8034)
                     /gene="rng"
                     /locus_tag="OQQ57_001957"
     CDS             complement(6565..8034)
                     /gene="rng"
                     /locus_tag="OQQ57_001957"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HCS1956739.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            complement(8024..8617)
                     /gene="yhdE"
                     /locus_tag="OQQ57_001958"
     CDS             complement(8024..8617)
                     /gene="yhdE"
                     /locus_tag="OQQ57_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HCS1956740.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAHKKAQAGVAQTAQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            complement(8626..9114)
                     /gene="mreD"
                     /locus_tag="OQQ57_001959"
     CDS             complement(8626..9114)
                     /gene="mreD"
                     /locus_tag="OQQ57_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HCS1956741.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            complement(9114..10199)
                     /gene="mreC"
                     /locus_tag="OQQ57_001960"
     CDS             complement(9114..10199)
                     /gene="mreC"
                     /locus_tag="OQQ57_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HCS1956742.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPTTGIAQPTPQQPTTGNAATA
                     PAANRSPQRATPPQSGAQPPARAPGGQ"
     gene            complement(10265..11308)
                     /gene="mreB"
                     /locus_tag="OQQ57_001961"
     CDS             complement(10265..11308)
                     /gene="mreB"
                     /locus_tag="OQQ57_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HCS1956743.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            complement(11613..13553)
                     /gene="csrD"
                     /locus_tag="OQQ57_001962"
     CDS             complement(11613..13553)
                     /gene="csrD"
                     /locus_tag="OQQ57_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HCS1956744.1"
                     /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
                     VATAIDTHLVSNDFSTLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSD
                     LFRELSVPLIKYPGMSLRLVYQDPMGNYFHSLMTTAPLTGAISFIIVMLFLAVRWLQR
                     QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
                     LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
                     QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT
                     LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
                     GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
                     QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
                     KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
                     DFFASSQPLDTNVKKYSQRYSV"
     gene            13705..14679
                     /locus_tag="OQQ57_001963"
     CDS             13705..14679
                     /locus_tag="OQQ57_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1956745.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVMVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAIIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            15657..16127
                     /gene="accB"
                     /locus_tag="OQQ57_001964"
                     /gene_synonym="fabE"
     CDS             15657..16127
                     /gene="accB"
                     /locus_tag="OQQ57_001964"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HCS1956746.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            16138..17487
                     /gene="accC"
                     /locus_tag="OQQ57_001965"
     CDS             16138..17487
                     /gene="accC"
                     /locus_tag="OQQ57_001965"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HCS1956747.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(17579..18626)
                     /locus_tag="OQQ57_001966"
                     /pseudo
     CDS             complement(17579..18626)
                     /locus_tag="OQQ57_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787050.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
     gene            complement(18623..19585)
                     /locus_tag="OQQ57_001967"
     CDS             complement(18623..19585)
                     /locus_tag="OQQ57_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1956748.1"
                     /translation="MSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQ
                     VTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPQEATGSAFVTYHNSGDR
                     DFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG
                     VISFYPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEE
                     GVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDVHR
                     ALQYANACGALAVTRRGPMEGTSRLAEIEAFIQRHDMSIREAAQ"
     gene            complement(19607..20596)
                     /locus_tag="OQQ57_001968"
                     /pseudo
     CDS             complement(19607..20596)
                     /locus_tag="OQQ57_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525780.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(20597..22096)
                     /locus_tag="OQQ57_001969"
     CDS             complement(20597..22096)
                     /locus_tag="OQQ57_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HCS1956749.1"
                     /translation="MTDVILDVSHIAKTFGHVQALKDITLSLRKGRVHTLLGENGAGK
                     STLMKILAGVYPPTQGTITLRGETITINNPQHSRQLGIAIIFQELSLSNNMTVAENIY
                     ANNEPRRFGIINDKKMLADCQNLLAERGIPLDPLEMVGNMSMAHRQLVEIAKALSYAA
                     DVVIMDEPTSSLSDNEAEILFNIIEKLKQRGCAVIYISHRMDEIMRISDDISVIRDGE
                     YIATHEKKNSDIQHLIAQMVGREMKNIWPARLGEIPDENVPAKLEVKNLSHPSLFKEI
                     SFAVRPGEVLGFFGLVGAGRSDVMKALFGLVSYQGTVLIDGKEVRITNPKQAIDHGIA
                     FVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
                     VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGT
                     AIILVSSELPEVMALSDRLVVMRNKTIADIYSCENLTQTQVMTAATGVR"
     gene            complement(22157..>22864)
                     /locus_tag="OQQ57_001970"
     CDS             complement(22157..>22864)
                     /locus_tag="OQQ57_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HCS1956750.1"
                     /translation="LFANQDLNKQLSDVEDFITKKVDAIIISPVDSKGVQAAIIKADK
                     AGIPVITVDVAAEGVPVVSHVATDNYAGGVEAGKLMGKLLNGKGTVAIISYPALQSVV
                     ARVDGFKKGLSDTPDIKIVAEQPSITRAEALTTAQNIMQANANLNGLFGFGDDAALAA
                     VIAAKSAHNDNIKIIGFDGMKEARDAVDSEKTFAAVIRQYPDQMGAKAIDAAVDHLNG
                     KPVEKMIPVQPGVYTGK"
BASE COUNT         5671 a         6192 c         5458 g         5543 t
ORIGIN      
        1 attatgtgat ctaaatcact tttaagtcag agtgaataat ggaacgacta aaacgcatgt
       61 cggtgtttgc caaagtagtt gaatttggct cttttaccgc cgccgccaga cagctacaga
      121 tgagcgtttc gtccatcagt cagacggtgt caaaactgga agatgagttg caggtaaagc
      181 tgttaaaccg tagcacacgc agcattggcc tgaccgaagc cggtagaatt tactaccagg
      241 gctgccgtcg tatgcttcat gaagtgcagg atgttcatga gcaactgtat gccttcaata
      301 acacccccat cgggacgcta cgcattggct gttcttcaac tatggcacaa aatgttctcg
      361 ccgggctgac agccaaaatg ctgaaagaat acccaggttt gagcgtcaat ctggttaccg
      421 gaattccagc ccccgacctg attgccgacg gtctggatgt ggtgatccgc gtcggcgcgt
      481 tgcaggattc cagcctgttt tcccgccgtc ttggcgcgat gccaatggtg gtgtgcgccg
      541 cgaaaagcta tctcacacaa tacggcatac cggaaaaacc cgccgattta agtagccatt
      601 catggcttga atacagcgtg cggcccgaca atgaatttga actgattgca ccggaaggga
      661 tctcgactcg cctgatcccg caagggagat ttgtgactaa tgatccgatg acgctggtgc
      721 gctggctaac ggcgggtgcc gggatcgcct acgtgccgct gatgtgggtg atcaacgaga
      781 tcaatcgtgg ggagctggag atcctgctgc cgcgttatca gtcagatcca cgcccggttt
      841 atgcgttata taccgaaaaa gataagctgc cgctgaaggt acaggtcgtg atcaactcgc
      901 tgacggatta ttttgttgag gtcggtaaat tgtttcagga gatgcacggg cgcgggaaag
      961 agaagtaatt catattgtac tgttacgttc tacaaacctg tgccaacggg ttcccctcac
     1021 cctaacccca gaggagcgag gggaccgttc gtgcacgtag aaagattaat tatccttctg
     1081 aaaataatga aattattacg cagtaccgcc aacagtcagg ttatcaactt tcagcgttgg
     1141 ctggcccacg ccaaccggca aactttgccc ttctttaccg cagacaccca cgccgttatc
     1201 cagtttcagg tcgttgccaa ccatcgaaat ctgctgcatg gtttcgatac cggaaccaat
     1261 caacgttgcg cctctcaccg gcttcgttac tttaccgttt tcaatcagat atgcttctga
     1321 agtggagaaa acgaatttgc cggaggtgat atccacctga ccgccaccaa agttcggtgc
     1381 atagataccg tactcaacgg attcaataat ttcctgcggg gtcgatttac ccggcagcat
     1441 ataggtgttg gtcatacgcg gcatgggcag atgggcgtag gattcacggc gaccgttgcc
     1501 agtcggcgtc atccccatca aacgcgcgtt gagtttatcc tgcatgtagc ctttcagaat
     1561 gccgttctca atcagcacgt tgtactggcc tggcgtacct tcgtcatcaa tcgccaccga
     1621 accacggcga tcgaccatcg tgccgtcatc aaccacggta cacagttctg aagccaccag
     1681 ctccccgacc tgcccactaa atactgaagt gccgcggcgg ttgaagtcgc cttccagacc
     1741 gtgacctacc gcttcatgca acagcacgcc cggccaacct gcgccaagta ctaccggcat
     1801 ggtgcccgct ggtgcagcaa cggcagaaag attgaccagc gccatacgca ctgcttcttt
     1861 tgcccatgca tccgcacgga cttcgccgtc aagatcggca aggaagaact cataaccaaa
     1921 acgaccgcca ccgccactgg caccgcgttc gcgtttgcca tcttcttcga ccagaacgct
     1981 cacggaaaga cgcaccagcg gacggacatc cgccgctagc gtgccgtcgg tggccgcaac
     2041 cagaattaat tcatagacac cactgaggct ggcagtcact tcctgtacgc gcttgtccgc
     2101 ttcgcgagca accttatcga cgcgacgcag gatatccagc ttctcttcac ggctcatgct
     2161 ttgcagcgga tctaccgagg tatacaacgg gctatgccct accgcgccca gcgtctgtac
     2221 tttgccatca ccactatcac ggacgatggt gcgcgccgct tgcgcactct gttccagcgc
     2281 cagcaggctg atttggtcag cgtaagcaaa tccggttttt tcaccgctga ttgcacgcac
     2341 gccaacgccc tgatcgatgt tgtaagaacc atctttaata atgcggtctt ctaaaaccca
     2401 ggattcgtga tagctcgact gaaaatagag atcgccataa tcaaggcgac gttcggccag
     2461 ttgaccgagg atcgcgaaca agtcctgatg tttcaggccg ttcgccgcta gcaattgttc
     2521 acttactagg ttaagactca tcgtttttgc tactcgttag ttactgcagt agaggatttt
     2581 ttacggctgc cggatgcggc gtgaacgccc tatccgacct acggttatgt tctggctcgt
     2641 tggcctttgg caacgattat catatgagat tggggcaatt acgcgccctc gtcaaatcat
     2701 tgcgcttttt ctttacgcgg ttggcgcaac acttcgttga tttgcggatc gtccagcgga
     2761 cccgaaatgt gatagcgcaa aatggagact ttgctccaca gcggccccag cactttactg
     2821 gctgcaaata ctgccgcgcc aacaatgggg ttaaccgcaa aagccgcagc cacgcccacc
     2881 gtcgcagaaa tctctggtgc gacaaccgct tccatattca ggtcgcgacg taccagattt
     2941 accgaccctt tcatggcgat atccgcctcc aggccatcca ccagcgtgtc gtcggtgtgc
     3001 ataacgccgt ctttaatcca cgcggtgctg cgaatggagt caaaatagaa cccttcgcca
     3061 aaagtgtctc tgaaatcaaa acgcagctta cgcatcaggg catcaacgct caataagcgc
     3121 agcaattgcc cggcatgtcc ggtattgatt tcggtaattt cgcctttacc cagttgagta
     3181 tgaatgatgc cattcaacgt cgcctcatct ggttgccagg gtgctttgcg ccagtgtaaa
     3241 tcgtaatcca cattaaatga cgactggcgt atgggcgtcg tgacaccaaa aaattctgcg
     3301 gcggcatcaa ttttctgccc gcgcagtttt cctttcagcg aggtacgttc attccccgga
     3361 ttattaaccc attcaccatc ggcagtaagc cgcgagaaac cagtatcaat cagtccattg
     3421 gtcagcgtta acgtatcgcc agaaatggtg agatcactgt caatacgacc gaatttttgc
     3481 ccccagaacc agcactctgt gcatcgtatt tgtgcgtccg gccagccacg gaagttaatg
     3541 cgctccgttg tcgggaaagg tgatgacggt gttgaatcac cacgagtttt cgccacgctc
     3601 gggttgtaat aaagatattt gatattcgcc agccacggcg cgttattacg catcgccagc
     3661 gtggcattga tttcacgccc ctgtgcctca accagggtgc catttgccgt cggttgcgaa
     3721 acaatactca ggttattcca ttgctgattt cccagtgaca acataggcgt acgtaacgtt
     3781 atgtgttgtg ggaaactcgc tgcaccaccg acactctccg cagcgccttt ctggaacagg
     3841 gccagccact cggcaccatt catcggcggc atattgagtt caacgccact ttgttccggc
     3901 aacggcggga gcgttttact gtctgccgcc caaatagcac gatcgagcgt cagcttttga
     3961 ccaagcaacc agcggctatt gaaatggtta tccgcaccag cctgtccggt taattcaaag
     4021 ctgctgagat tgccatcaac cttaacgttt accggcagtg gttcacccgc aggtttggct
     4081 aacggtgaag gtaagtgact gctcacatta ttcagatcgc cgttcagctc tacgttatag
     4141 gtcgcgccag catgataagg cagatcaatg cccactttac catcccacgc cacgctgcca
     4201 ctcaatgctt cgttcaccgc tgcaggcaga acgccggttt tcgccggttg ccagttaccg
     4261 ttgaggttta ccgcaacctg gtaggctttt gccccttctt tggtggaaaa atccacgttc
     4321 aacggctgat taaaccagct tgctgtcagt ggttcacttt gcagatcgcc attgataaag
     4381 ctgaatttac cgctcaaatt tttcagggtg ctgtcgagta gtttgataaa cagactgtta
     4441 ttacgcagcg tcacttcacc tttcgcggtt accagttcgc cgttcagcgg gatatcaaga
     4501 tgtaagcgag cattcacatc gccgtcgagc tggagttctt gcagggtcgc acccagagaa
     4561 tctttcagcg gtgtctcatc aaagtaaggg ccaacggctt tacccggacc tttaatgtca
     4621 gcgtcaatca gcagtttttc tttcgagtag tcagggatca ctgcggtgag attactcgcg
     4681 cgcacgccgc ccagattaac gtcatcggtt ttcatccata aaccgtcgtt aataaagtcc
     4741 agttcaatat caaggttagt taatgcaggc cagtccggct ggaaggcaaa cttcgcgtta
     4801 cgcagcggca ccagcacttc aaactgacct tcgttgtgtt tataggggaa gagttgcgga
     4861 ttgccaccat aaaccagcgt cgcgttatcc gcttcaccgc cctgaatcgc gccacttaag
     4921 taatcaacta ggtctttacc catcaagttt tccgggaaat agcgccaggc ttgtgaacca
     4981 tcatcggtac tgatgccagc cagaataccc agccagggtt catcgttagc aggttgcagg
     5041 taacgaaaac cgccgcgcgc atggacagct ttggctttaa cgtcaatatt acgcccatcc
     5101 aggtggaaac ctttgtcatt gttcagccag cttatagttg cctggccgtc ggcgatttcc
     5161 agtggcgcac ggaataccgt ttcgtaaggc atctttgcct gcttcatcga cgcggtaagc
     5221 aaaccatttt caacgctgcc ggaaagcgtc ccggagaagt gttccgcacc cggtaataat
     5281 ttccattgct tccaggccag atcgctccac gatgcctgaa aacgggtctt gtctgccgcc
     5341 tgaagcggga tatccagcgc cagagtgtta atcttgccgc tcggttgtgt ggagcgccaa
     5401 acatcaccca gtgcaggtga aagtttcgcg gccagcgggc gtatgccctc caggcctgcc
     5461 agctccagat tactggcgcg aatccggagt tcgtcactgc gtttattgtc tttgccgcca
     5521 acgtcctgtt ccggtatcca ggccagcgtc aatgctccgc tcggccaggg tttgccgtcc
     5581 atcgtgatcc gtgtatcggg aatagagaac tgccagcccg gattttcacg cgtaatatgc
     5641 gcggtcagat tatccaccga cagcgtatgc gtttgcttct cgcccaacca gctggcaccg
     5701 ccctgtttca gccagacgtc accgccggtt acatcgcctt tgtcgatcgt catccagcct
     5761 tcaagggaga actgtgccgt ttccagagca atattgtcct gcatccattt accgagccac
     5821 ggcttcaggt cgatgtcatc cgcctgtagc cagacgcgac cattgcttaa caacccctca
     5881 tcatcgcgca aatccatgcg cacctgcatc acgccgtgct gtccggtaag gctggagagg
     5941 cttaccaagc cttccgcacg gtgtcgacgt ggatcgttca gccaggtgag ttgtgggatc
     6001 gccagctcgg cgcgctgacc ggatggcgtc agaaaactga cttcactgtc gcggagatcg
     6061 aaatggtcaa attgacgaag aaacagatcg ctgatgtgac tggcttccag gctatcatta
     6121 ccaccaccgc tggtgatagg agtgttggtg cgaaagcgca gctgccagaa agtgaggtcg
     6181 cgaaactgcc agcgcatatg taacaagctc tgccagacat ccagcgccag agtaacgcgt
     6241 ttaaccgaaa attcgccgcc atcttttagt tctgcacgga tgtcgtgtgc ttcaagcgtc
     6301 gggccaaaat tctgccagct ggctgagagc tgactggctt ctaccggcat gccagtcgcg
     6361 gattctattt tgttgaggat ttccggacgc caggcgtcaa gatgcggtaa agcaatacgc
     6421 aggccgctaa ccagcagggc tgcgatcaca acgagcgcgg ctccagtaag cagtaaaatc
     6481 cccggcaatc gcctcacccg tcactccttg tctgctaaaa atgtgactca aaaacccttt
     6541 gccggatggc ggcccagcat ctgtttacat cattacgacg tcaaactgct cctggttata
     6601 gagcggttca atttgtactt taacctgttt gccaacgaaa atttccactt ccgccagcga
     6661 gtgtgactct tcgcctttca aggcttcagc tactgccgga gaagcataga ccaggaaacg
     6721 gtcggagtcg taagcatggt ggacacgaac aatctcgcgc atgatttcat agcataccgt
     6781 ttccacggtt ttcaccgttc cgcgaccgtg gcaggttggg cattcgttac acagtacgtg
     6841 ctcaatgctt tcgcgggtgc gtttacgcgt catctccacc agccccagcg ccgaaaaacc
     6901 attaacgctg gttttcaccc ggtctttgct caacgcctgc tccagcgagt gcagcacgcg
     6961 gcggcggtga tcttcattat tcatatcgat gaaatcaata atgataatcc cacccagatt
     7021 acgcaaccgt aactggcgag cgatagcctg cgtcgcttca atattggtat tgaaaatggt
     7081 gtcgtccaga ttgcgatgac cgacaaacgc tccggtattg atgtccacgg tggtcatcgc
     7141 ttcggtctgg tcgataatca gataaccacc ggatttcagt tctactttgc gttccagcgc
     7201 tcgctggatt tcgttttcga catcaaagag atcgaaaatc ggctggcgtc cggtgtaatg
     7261 ctccagcttg ctggtcatct cgggaatgta ctccgaggta aactccagca atgcttcgta
     7321 agtcaggcgt gagtcaacgc gaatgcggtc cagttcggcg tcggcgaaat cacgcagaac
     7381 acgctgcgcc agcgccagtt cgccgtacag ctgataacgg gtctgcgggc gttttttacg
     7441 ctccataact ttggtccaga cgcgtttcag ataagcggca tcggaggcca gttcagcctc
     7501 gccaacccct tccgctgcgg tacggatgat aaacccgccc tgctcgtcgc aatactctgc
     7561 gaccactttt ttcaggcgtt cacgttctga ttcgctttca atacgttggg aaaccccaac
     7621 gtgagaagcc cctggcataa acaccagata gcgagaaggc agcgtgatat cggtggtcag
     7681 gcgcgcacct ttagtgccaa gcggatcttt caccacctgc accatcagat cttgcccctg
     7741 acgaaccagt tccgagatgt cgcgcaccgt gaattgcttt tgttcttcac ccgccacaca
     7801 ttcggtgtgc ggcatgatat cggatgcatg aagaaacgcg gctttatcca gcccaatatc
     7861 tacaaaagcc gcctgcatac ccggaagtac acgacttaca cgacccttgt agatattgcc
     7921 tactattccg cgtcgcgcct cacgttcaat atgaatttcc tgcagaatac cgccatcaat
     7981 atacgccact cgcgtttccg aaggcgttac gtttactaac aattcagccg tcatgtttat
     8041 cccttttctc acgcagtgcg ttaaaattac ttaataattc atacgtttca accagcggta
     8101 agccgactac ggcgtgatag ctgccattta tcttcctgac aaaacagcca cccagcccct
     8161 gaataccgta tgcacctgct ttatctaacg gttcaccgct ggcgacatag cccgcgatgt
     8221 cttcgtctgt taacgttctg aaagtcacat cggtgaccac caggcaatcg agaatgtgct
     8281 ggctgtcggc caacaccact gccgtcatca cctgatgggt ctgacccgat aatttgcgca
     8341 acatctgcgc cgcatgctct gcgtcgcgcg gtttctccag cacttctcca ttcaggataa
     8401 cgatagtatc cgcacccagc accgggagat cctgcgccgt ttgcgcgaca cccgcctgtg
     8461 ctttcttgtg tgccagacgc acaacatact gctgcgcgct ctcctgcggc tgacgctgct
     8521 cctcaatgcc cgtaacaata cgttcaaagg tcacgccaag ttgcgcaagt aactcctgac
     8581 gacgcggaga accggaagct aaatacagag aagtcataga aacctttatt gcactgcaaa
     8641 ctgctgacgg actttacgca tcagcaagaa aatccacggc cagagcaccc cattgactac
     8701 actactccag aacacttccg gtctgaaaga gacgttaatc actaaaaact ctgcccagaa
     8761 aacaataata tccaccacca gcgaaagcaa catgacgact agcgcctgct gccataatgc
     8821 gaggttgcgg aaaagctggt atttcagcgc caccaggtaa gcaatgatgc tcatcgccaa
     8881 tacgcgtacg ccaagcgtcg agccgctgat cagatccagt atggcaccca tcacaaaacc
     8941 tgtgcccaca tttacgcgat ggggcaaggc caggatccaa tacaacaaga taagtaacac
     9001 ccagtttggc cggaaaacaa tcaggttatc cggccagggc atgatttgca gcaacagcgc
     9061 aatgaggaaa gagagccaga ttacccaacg tccctggcta cgatagctcg ccactattgc
     9121 cctcccggcg cacgcgcagg cggttgagca ccactttgcg gcggcgtagc cctttgtgga
     9181 gagcgattag cagcaggcgc agtagctgca tttcctgtcg tcggttgctg cggagtcggc
     9241 tgagcgatcc ccgttgtcgg ttcaggtaac tttggcccca tcgcgtctgg cgaaggcaat
     9301 acctgcggca tcatctgcat cagacgttca ttagcaacac gatgcacctc ttccggcgtc
     9361 atcgggttag cgccgttacg atccgcgccc cacagcagca gcagataacg caaacgttgc
     9421 agtcctgcag tcggacgcgc ctgaatcaca gtataagcgc gctgggtatc gagttttacg
     9481 gaagagacaa ccgcgaccgg atagccttcc gggaaacgac cgcccagacc ggaggtcacc
     9541 agcacatcac caacacgaat atccgtattc gctggcagat gctcaagctg caaatcatct
     9601 gtacaaccgt taccggctgc aattacgcgg atatcgttgc gcagcacctg gattggcagc
     9661 gcgtgggtcg catcacaaat cagcagcacg cgactggtca gtttagcgac ggccaccacc
     9721 tgaccaacaa cacctttgtc gctgatgacc ggctggcctt cataaacgcc attaacgcta
     9781 cctttatcga taacaacttg atcgctataa ggatcgttaa ccgtggagat aacctgagtc
     9841 accattttct gctcatcctg acgcagcggg gaacccagca gctcgcgcag acgcgcgttc
     9901 tcctgtttgt attgtccaag catcagcagt tcactgtttt tcagcaacag ttcctgacgt
     9961 aacgcccggt tttcaagttc tagttggtca cgcgaggcca gcgtctgcga tacgccatcc
    10021 agcaattcac gaggagcatt ggaaacaaag tagaaaggac tgacggcggt atccatataa
    10081 gtacggattt gactgaacgt ccccaggcgg ctgtcggcaa taataatgcc gagcgccacc
    10141 agcaccgcca gaataaggcg aatctgtagc gacgggccac ggctaaaaat tggcttcata
    10201 agttatgcgt attctcgtat cagaccaggc agggtaaaca gacatttccc ctgcctgcat
    10261 ccgattactc ttcgctgaac aggtcgccgc cgtgcatgtc gatcatttcc agcgctttgc
    10321 cgccaccgcg cgccacacag gtcagcgggt cttcagcaac aacgactgga atgccggttt
    10381 cttccattaa caaacggtca aggttacgca gcagtgcgcc accaccggtg agcaccatgc
    10441 cgcgctcgga gatgtcggaa gccagttccg gcgggcactg ttccagtgca accattaccg
    10501 cgctcacaat accggtcagc ggttcctgca gtgcttcgag gatttcgttg gagttcaggg
    10561 taaaaccgcg tggaacacct tctgccaggt tacggccacg aacttcgatt tcacggactt
    10621 catcgcccgg gtaagccgaa ccgatttcgt gcttgatacg ttctgcggtg gcttcaccga
    10681 tcagagaacc gtaattacga cgcacatagt tgatgatagc ttcgtcgaaa cgatcaccac
    10741 caatgcgcac ggaagaggag taaaccacgc cgttcaagga gataacagca acttcagtgg
    10801 taccaccacc gatatcaacc accatagaac cggtcgcttc agaaaccggc aggccagcac
    10861 caattgcggc agccatcggt tcttcaatca ggaagacttc acgggcacca gcgccctgcg
    10921 cggattcacg aattgcgcgg cgttcaacct gggtcgcgcc aaccggtaca caaaccagaa
    10981 cgcgcgggct tggacgcata aagttgttgc tgtgcacttg tttgatgaag tgctggagca
    11041 ttttttcagt cacgaagaag tcggcgataa cgccgtcttt cattgggcga atggcagcaa
    11101 tattgcccgg cgtacggccc agcatctgct tcgcgtcatg acctactgca gctacgcttt
    11161 tcggtgaacc ggcacgatcc tgacgaatgg ccaccacgga aggctcattc aatacgatgc
    11221 cttgtccttt tacataaatg agggtattcg cagtacccag gtcaatggac aagtcattgg
    11281 aaaacatgcc acgaaatttt ttcaacatac taagggataa tcctgaaagc tggggcggaa
    11341 aagaaaatcc gcttacttta ccaaccacac gcagcagcga caaggcgcaa aaatcatctg
    11401 ctacggtgaa aattagtgca gttcgtttcc tttgttacaa atctctgcct gagtccagaa
    11461 aggcttaatg catcagcagc attcctcgcc tgtttgcaac cgcgtaaggt cattcatctg
    11521 catatgtgct gcaacaatct ggcgagcaga caagcacact cccatgagac gcagcgcgcg
    11581 ttattctacg tgaaaacgga ttaaacggca ggttaaaccg agtatctttg tgaatatttt
    11641 ttcacgttag tatcaagtgg ctgtgaggac gcgaaaaaat ccccttgccc gcctgtaaca
    11701 ccgcgctgaa tcagggtctg ccactcgctt cgcgaacgca caccggtggc gtaaacctgg
    11761 gtgctggtcc cggagcaggc ttccaccagg ctttgaacca gcagctggtt ctccgttcgc
    11821 ttctcaatgt ttctgaccag ccccggatgg agcttgagta actcaacatt aagttctttg
    11881 atccaactgg tgcttaccag cgtcaaacca gcctggttga cggctacccg tacccctaaa
    11941 gcattcacta aacgaataac aggttgtaaa cgactgatat gttgacctac atcggcctct
    12001 gcaagttcaa taattatgcg ttttcgttgt gatttttcac attgcattaa cgtatcgcgc
    12061 agccaacgct gaaaacgcgg gcgaatcagc gactcaacgg taacctgaat cgccagattt
    12121 tcctctggcc agtaacgcaa tagtggaata agacggctga tttgcagacg gtcatactct
    12181 tccgataagc caaactgcaa gaccatcggc atatactccg ccgagctaac ctcttcatta
    12241 ccatcgaaga tgcggcacat gagttcgcga tgatgaacct gaccttcgcg agtaaccgcc
    12301 ggtttttgat aaaggcgcgg gccgccgcga ctgagcattt gctcgataag cgtacgccag
    12361 cgaacattac cgcgtccttt ttcaggcaac gagtcatcgt aaatagccca gctattgccg
    12421 ccctgcaatc ccgcattacg cgtggcagac tctgcatgtt ccattacctg ctcggtatcc
    12481 tgaccactac gccaggcgca gataccaatg tggatcatat cgtcgcgatc gagcatttta
    12541 ttgttcggca aggtatcgac ggctttgatt aactgaccgg cgatgctctc tgcctctttt
    12601 aacgtccggt gcggtaacag cgcagcaaaa tcactgcggt ggtaacgcgc cagcagtgcg
    12661 ccagggtagc gcatcataaa tgtcgacagc agattcgtca gagtgaagaa ctgttcttca
    12721 acctggctgt gcccccaagt atcgctcaac atattgaaat ccggcagacg aatcatcatc
    12781 acgatcccgt gggtacctac tttctcctga tcttccagta acgttgctaa ctgattatcg
    12841 aaaaagagtc ggttattgag gccggttttc acgtcctggg cggcataaga gcggatcagc
    12901 gtatcaagac ggctgtgttg ttcgcgtgcg ttctgaattt cacgaagcag cgtatccagc
    12961 gcactgctgg ttctgggcgg ccattcatag atggttccca acacattaga gccacgctca
    13021 ccgtttaaga tacgagtagc ccgggtttcc agcaattctt gcccggcaag ttgccgttgt
    13081 aaccagcgta ccgccaagaa gagcataaca atgataaagc taatcgcccc cgtgagcggc
    13141 gcggtggtca tcaacgaatg gaaatagttg cccatcggat cctgataaac cagacgcagc
    13201 gacatccccg gatactttat caacggaacg ctcagttcac gaaacagatc gctggagcca
    13261 accggacgat aactaccatt tctggccagg gtataaacct gtttatcacc atggagcagg
    13321 tctacacgaa cgatatctgc cgacatcatt aattcggtaa tttgtggcct taatgtgctg
    13381 aagtcattcg acacaaggtg ggtatcaatc gccgtcgcca ccgcctgaac gcgatgacta
    13441 aacttatact gaattgcgtt gtagaaactt agcgaacagc ccagcaaagt cacaaaaatt
    13501 gttaacccgg tgagcagcgt aacaaaggcc gaaaatttcg tcgttaatct catccttgtg
    13561 ttaactccga tagtgaggaa gcgggcatac tagcaaatca gatttatctc gcaatttatt
    13621 gcgcttcatc ggctttgctt ttccattagc gagtataatc ttcagaaatt attttccaat
    13681 ccatcatgca catgaggacc acttatgcag gcgttacttt tagaacagca ggacggcaaa
    13741 actctcgcat cagtacagac tctggacgaa agtcgcctgc cggagggcga tgtcatggtc
    13801 gatgttcact ggtcgagcct gaactataaa gatgcgctgg cgattaccgg taagggaaaa
    13861 atcatccgta attttccgat gattcctggg atcgattttg ccggaactgt acgcaccagc
    13921 gaagatccgc gttttcatgc cggtcaggag gtgttactca ctggctgggg cgttggtgaa
    13981 aaccactggg gtgggctggc ggagcaggcg cgagtgaaag gtgactggct ggttgccatg
    14041 ccgcaagggc tggacgcgcg taaagcaata attatcggta ctgccggttt taccgccatg
    14101 ctgtgtgtga tggcgctgga agatgccggt gttcgcccgc aggacgggga gattgtcgtg
    14161 acgggtgcca gtggtggcgt cggcagtacc gccgtggcgc tgctgcataa gttgggttat
    14221 caggtcgttg ccgtttccgg tcgcgaaagt acccatgaat atctgaaaag tttaggtgcc
    14281 agccgtattc tccctcgtga tgagtttgcc gaatcccgtc ctctggaaaa acaagtctgg
    14341 gctggggcaa ttgacactgt tggcgacaaa gtgctggcaa aagtgctggc gcaaatgaat
    14401 tacggcggct gcgtggcggc ctgtggtctg gcgggtggtt ttactctgcc aaccacggtc
    14461 atgccattta ttctgcgtaa tgtccgtttg caaggggtgg attcagtaat gacgccacca
    14521 gaacgccgcg cacaagcctg gcagcgactg gtcgccgatt taccggaatc attctatacc
    14581 caggcggcaa aagagatatc tctgtcagag gcaccgaact ttgccgaggc catcattaat
    14641 aaccagatcc agggtcgcac gctggtgaag gttaactaac catttagcaa ggaataataa
    14701 gagagggaac tcattttgac atcattattc aatcggttaa cgggaaaagc ggttagccgg
    14761 acagctttcg tcgaacacct tggtcaggaa gttgtacaac atcatccaaa ctggaaagtc
    14821 atgatttcga ctgaccacaa attgatgcgc attgatactc ctctaaacag ccattattga
    14881 tacgcctccg tcgcctgtta ggtttatggt gctttgcctg ggcgacacta cgcttaacct
    14941 gttactgatt tctggtacca tggggtgaat aatctgattt tatttgacta caaattaacc
    15001 actcgaacct atttaatgct gagaattgtc agtcggttga ttttgcgtgc tttagcattc
    15061 acatctatcc agacgatgca gtgaaaattg ggtaatcccc agcaaccgct gcgtaatgtc
    15121 gtctatcttg tcgcgatcct ggcatcccta cattatttgt ggtctgtgaa gattatctca
    15181 ttgcagcccc tcatcttcgc agggctggct ttacagcttt tcaccttacg ttataagaag
    15241 ttccgtcgat gatggcgcta atttcgtgaa ttgtgcggct tgttgcaaat tacacggtgt
    15301 tgaaggttat ttacatgtta gctgttgatt atcttccctg ataagaccag tatttagctg
    15361 ccaattgcta cgaaatcgtt ataatgtgcg acctcgtcct ccctgacgca gtttttgcgc
    15421 tgcggaaaag gtgacattgg cgcaacgaag gtatattttg ttttttgccg gaggatagca
    15481 gcagatcgct gcacaatgtc cgtcaagtct aacattgata ctctggggca aaatagaccg
    15541 gcgtcccggc ctgctggaat ttatcgctat gcatacagct gtcggggcat acgctttaca
    15601 gacggcggtg aaacgcctgt cacaatcaca ctaaacaaag agtacggaac ccactcatgg
    15661 atattcgtaa gattaaaaaa ctgatcgagc tggttgaaga atcaggcatc tccgaactgg
    15721 aaatttctga aggcgaagag tcagtacgca ttagccgtgc agctcctgcc gcaagtttcc
    15781 ctgtgatgca acaagcttac gctgcaccaa tgatgcagca gccagctcaa tctaacgcag
    15841 ccgctccggc gaccgttcct tccatggaag cgccagcagc agcggaaatc agtggtcaca
    15901 tcgtacgctc cccgatggtt ggtactttct accgcacccc aagcccggac gcaaaagcgt
    15961 tcatcgaagt gggtcagaaa gtcaacgtgg gcgataccct gtgcatcgtt gaagccatga
    16021 aaatgatgaa ccagatcgaa gcggacaaat ccggtaccgt gaaagcaatt ctggtcgaaa
    16081 gtggacaacc ggtagaattt gacgagccgc tggtcgtcat cgagtaacga ggcgaacatg
    16141 ctggataaaa ttgttattgc caaccgcggc gagattgcat tgcgtattct tcgtgcctgt
    16201 aaagaactgg gcatcaagac tgtcgctgtg cactccagcg cggatcgcga tctaaaacac
    16261 gtattactgg cagatgaaac ggtctgtatt ggccctgctc cgtcagtaaa aagttatctg
    16321 aacatcccgg caatcatcag cgccgctgaa atcaccggcg cagtagcaat ccatccgggt
    16381 tacggcttcc tctccgagaa cgccaacttt gccgagcagg ttgaacgctc cggctttatc
    16441 ttcattggcc cgaaagcaga aaccattcgc ctgatgggcg acaaagtatc cgcaatcgcg
    16501 gcgatgaaaa aagcgggcgt cccttgcgta ccgggttctg acggcccgct gggcgacgat
    16561 atggataaaa accgtgccat tgctaaacgc attggttatc cggtgattat caaagcctcc
    16621 ggcggcggtg gtggtcgcgg tatgcgcgta gtgcgcggcg acgctgaact ggcacaatcc
    16681 atctccatga cccgtgcgga agcgaaagct gctttcagca acgatatggt ttacatggag
    16741 aaatacctgg aaaatcctcg ccacgtcgag attcaggtac tggctgacgg tcagggcaac
    16801 gctatctatc tggcggaacg tgactgctcc atgcagcgcc gccaccagaa agtggtcgaa
    16861 gaagcaccag caccgggcat taccccggaa ctacgtcgct acatcggcga acgttgcgct
    16921 aaagcgtgtg ttgatatcgg ctatcgcggt gcaggtactt tcgagttcct gttcgaaaac
    16981 ggcgagttct atttcatcga aatgaacacc cgtattcagg tagaacaccc ggttacagaa
    17041 atgatcaccg gcgttgacct gatcaaagaa cagctgcgta tcgctgccgg tcaaccgctg
    17101 tcgatcaagc aagaagaagt tcacgttcgc ggccatgcgg tggaatgtcg tatcaacgcc
    17161 gaagatccga acaccttcct gccaagccca ggcaaaatca cccgtttcca cgcacctggc
    17221 ggttttggag tgcgttggga gtctcatatc tacgcgggct acaccgtacc gccgtactat
    17281 gactcaatga tcggtaagct gatttgctac ggtgaaaacc gtgacgtggc gattgctcgc
    17341 atgaagaatg cgctgcagga gctgatcatc gacggtatca aaaccaacgt tgatctgcag
    17401 atccgcatca tgaatgacga gaacttccag catggtggca ctaacatcca ctatctggag
    17461 aaaaaactcg gtcttcagga aaaataattt gtgacgcgcg gtgttttcat cgcgcttagc
    17521 aaagaacgta atcaacgccg ggcctgttaa cgctgcccgg cgtttttatt gccgttagct
    17581 aacggtagcc tgcaatttcc gctttcaacg cgctcatttc agcatcgcca tcaacaattc
    17641 ccagctcaaa gcagtatttc tttgtttccc ctggctcaat aaagggcaga cgcccctgcg
    17701 ctcgttcttt atcacgaccg tcaggaaaac tattactgac ctccagtccc ataacatact
    17761 cacccgcgcc taaatttttc cactggataa agttgggtag ctgcatggtg tcgaatttct
    17821 cgtaaattcc ccaccccagt tcggcgttca ccagagcaac tttactcatc ccctgactgt
    17881 cgctattcaa cgtgagatag taaacctgct cgtcaaaacc gggctgtggg gtacaaatct
    17941 ccagatgact ggttaaccct tccgccgcat gcggagttcg tggcgttacg cttttagccg
    18001 acagcaagat ttctggcctg tggcgataat aaaggccagc cgtaattaaa gtgataaaga
    18061 atttgcagcg gctggcgggt gaaaccatga ttagtcacct tgtcttcaat gcgcagcaca
    18121 ttttcgccat aacggcagcg aatggtcctt tccagcgtca gattttcgcc gaacagtcgc
    18181 gtttcccgta ctttgccatt gatgacaaat tcaatgccgt cgtcggtccg ttctgtgcga
    18241 taccccacct cttctgctgg agtcgcagcc aaacgcccgt gtaaccccag cgtttctcct
    18301 tcatcctcac aaggcgtgcc aatgtagcta agtccgcagg tagtcagtaa ccccgcgtaa
    18361 aagctacgta aaaatccgtt gccctgagac tcaaaaaaag cgggggcgac aatgccgttg
    18421 ggggtgataa aagaaagcgc cgtgtccttg tagctggccc atgcaatatc cagcgcgcga
    18481 tcttttacca ccgtaaatgc cagtcccgca ccagtacgga catcaaacgc ttctgtaccc
    18541 tttgctctgc cactacgtaa ctcatagtgt ttaattccgg caacctgcga gagatcgcca
    18601 atccacgacc aaatttcgtt tttcattgtg ctgcttcccg aatggacatg tcatggcgct
    18661 ggatgaacgc ttcgatttcc gcaaggcgag acgttccctc cattgggcca cgtctggtta
    18721 ccgccagcgc accgcaggca ttggcatatt gcagcgctcg atggacgtca aaccctagct
    18781 ggcggcaggc aatccacgcg ccaccaaagc agtctcccgc accggtcggg tcaacttctt
    18841 ccaccggata gctctcaaca tgaaactgct cattcgcgga gtagtaactg gcaccttgat
    18901 tgccgcgctt cacaatcacc tctttaacac cttcttcaag aaaacctgcg attgcacgct
    18961 ccggcgtcga atgtggcgac aagagcaaca cttcgccctc gctgggcata tagatatccg
    19021 ttaactcaag aacaaagtgg agggcgtcac gcatttctgg aatatcgagc atctctttac
    19081 gaatattagg gtagaaagaa ataacaccac catttgcttt aacgatagtt accgcttttt
    19141 ttactgcgtc taccatatga aacgaaaaca gggaagagcc cataatatga aaatgggtac
    19201 agtccttcag aatattttca tcaacatgct gcgccgataa tttaccgcaa gcggcattct
    19261 taatattaaa aataaaatcg cgatcgccag agttatgata agtaacaaag gcactcccgg
    19321 tagcttcctg aggtaagact gaaatccccc tgatatccac accgtcagca gccagacgat
    19381 gtatattaat atcaccaaag ccatcattcc ccacacagct aatgatgccg cacggaacgc
    19441 caagacgtgt cacctggtcg ataaaaatag cgggcgcacc actgggataa gggccgttcc
    19501 agatacctgg ttgatcaaat ggctggccga ttttactcgc cataatttca accagaattt
    19561 ctccaattgt gaagacctta ctcatatgat taattccttg aaatgattag ctgcgttttc
    19621 ttttatttct tacgtcaaaa taaacggcta caagaatgac taatccttta accaccatct
    19681 ggtaaaaata gggaacattc attaagttca tgccattatt aataacgccg atagttaatg
    19741 cgccgatcac cgtccccacc acggttccat agccgccgtt caggctggtg cctcccagta
    19801 cagccgcagc aatagcatcc agttcgtagc tcaacgcgga attcggttac ccggaataga
    19861 ggcgtgaggc gaggatcatc ccgctgatac ctgccagcac ggctgtaatc ataaagactt
    19921 taattttcaa gcgggtgaca tttatccctg aataaattgc cgcttcttta ttaccaccag
    19981 tgatataaat ttttcgtcca aaggttgttt tagtaagaat gaagtggtta atcagcaata
    20041 agatgattaa tatccagatt ggaataggta tatagagaaa ttctccattc cccagtgcca
    20101 gaaaggcatc atctttaatc atgatgggca taccatcggt cactatataa gcgataccac
    20161 ggaagatccc catagtagca acggtgacaa taaacgacgg gatccccgct atagccgtca
    20221 agccaccatt tatcatcccc agagccagtg ctgcaataat ggataatggg accaataaaa
    20281 taaatggaat tccccatgaa gccccaagcg cagcaaatgt gccaatcaat gcaatggttg
    20341 aaccgaccga taaatcaata tcgccaagca aaagtacata agtcattcca taggcggtaa
    20401 ttgcaattat cgaaacctga agaataatat tagtaatgtt gttggcggta aaaaaactgt
    20461 cattaataaa actgaacaga atgattaaca ccaccattcc actgaggata ccgccatatt
    20521 gcctgaagac ttttttaaaa ttatttgcaa tgggaatttc cgaaggtttc ggactggcaa
    20581 gagttttctc tgtcatttaa cgtactcctg ttgcagcggt cattacctgt gtctgcgtta
    20641 aattttcaca tgaataaata tcggcaatcg ttttattacg cattaccacc agacgatcgc
    20701 taagtgccat gacttctggc agttcagagg acaccagaat aattgctgtc cctgccgcag
    20761 ccagttgacg tatcacgtta tagatttcaa attttgcgcc gacatccact ccgcgcgttg
    20821 gctcatcgag caataaaata cgcggagttt tctccagcca cttcgataac acgattttct
    20881 gttgattacc gccgctcagc gctcccactg cctgatgtac agaactcact ttagtgttca
    20941 ttctggcaat tgattgcagc gtcttcgcct cttcttgtcg gtgattgatg agtcccatcc
    21001 gcgaagcgtt atattgaaac gccacatggt gcgtgttcat attgacgtcg tgcatcagca
    21061 ctaacccttc ttccttgcgg ttttcggtca caaaagcaat gccatgatca atagcctgtt
    21121 taggattagt gatcctgact tccttaccat caatcaacac agtcccctga tacgaaacga
    21181 ggccaaagag cgccttcatc acatcggaac gcccggcccc caccaggcca aaaaatccga
    21241 ggacctcccc cggacgcaca gcgaaactga tctctttaaa aagcgaagga tgggaaagat
    21301 tttttacttc cagttttgca ggaacatttt catccggtat ttccccaaga cgtgctggcc
    21361 aaatattttt catttcccga ccaaccattt gggcaatcaa atgctggata tcactgtttt
    21421 tcttttcatg cgtggcgata tactcaccgt cgcggatcac cgaaatatca tctgaaatcc
    21481 gcataatttc atccatgcga tgagagatat aaataaccgc acagcctcgc tgctttaatt
    21541 tttcaataat gttaaacaga atctccgctt cattatcact tagcgaagat gtcggttcat
    21601 ccataatcac gacatccgct gcatagctta aggctttagc aatttctacc agttgcctat
    21661 gtgccatcga catattgccg accatttcta gtgggtctag tggtatgccc cgttccgcga
    21721 ggagattctg gcaatctgcg agcatttttt tatcgttaat aatgccaaaa cgtcgcggtt
    21781 cattattggc ataaatattt tccgccacgg tcatattatt actcaggctc aattcctgaa
    21841 aaataatcgc aattcctaac tggcgtgaat gctgcggatt attaatggtg atagtttcac
    21901 cacgtagtgt tatcgttccc tgggttggcg gataaacacc ggccagtatt ttcattaatg
    21961 tcgatttacc ggcaccattc tcgcctaata aagtatgcac ccgcccttta cgtaaagaga
    22021 gggtaatatc ttttaatgct tgaacatgac caaatgtctt cgcaatatgc gaaacatcaa
    22081 gaataacatc cgtcataatg acctcggtgt cacaacaaaa cgccaataac gttttgttgt
    22141 gaggtgaaga tgtttactat ttacctgtat aaacgccggg ttgtaccggg atcatttttt
    22201 ctaccggttt accattgagg tgatcaacag cggcatcaat ggctttagca cccatttgat
    22261 cgggatattg ccgaatcacg gccgcaaacg ttttttcact gtcaacggca tcacgcgctt
    22321 ctttcatgcc atcaaaacca atgattttga tgttgtcgtt atgcgcagat tttgctgcga
    22381 taaccgctgc cagcgccgca tcatcaccaa agccaaacag accattcagg ttggcatttg
    22441 cctgcataat gttttgcgca gtcgttaacg cttcagcccg cgtaatacta ggctgttcag
    22501 caacaatttt aatatccggt gtatcgctta accctttctt aaaaccatca acgcgcgcaa
    22561 ccaccgattg tagtgccgga taagaaataa tggctacagt acctttacca ttcaaaagtt
    22621 tgcccattaa cttgcctgct tcaacgcctc ccgcatagtt atcggtcgca acatgcgata
    22681 cgaccggaac gccttccgca gcgacgtcga cggtgataac gggaataccg gccttatcgg
    22741 ctttaattat cgccgcctgg acgcctttcg aatcgaccgg agagataata atggcatcca
    22801 cttttttagt aataaaatcc tcaacatcag aaagttgttt gtttaaatcc tgattggcaa
    22861 atag
//
LOCUS       DAJVUK010000055        22804 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.055, whole genome shotgun sequence.
ACCESSION   DAJVUK010000055 DAJVUK010000000
VERSION     DAJVUK010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22804
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.055"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(165..815)
                     /gene="tetR(A)"
                     /locus_tag="OQQ57_001971"
     CDS             complement(165..815)
                     /gene="tetR(A)"
                     /locus_tag="OQQ57_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(A)"
                     /protein_id="HCS1956751.1"
                     /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH
                     FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG
                     TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG
                     TVEQAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
     gene            921..2120
                     /gene="tet(A)"
                     /locus_tag="OQQ57_001972"
     CDS             921..2120
                     /gene="tet(A)"
                     /locus_tag="OQQ57_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HCS1956752.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSG
                     AGQRADR"
     gene            complement(2152..3036)
                     /locus_tag="OQQ57_001973"
     CDS             complement(2152..3036)
                     /locus_tag="OQQ57_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCS1956753.1"
                     /translation="MSLRTPDLLFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALP
                     AGLLLVMIVRQIPTGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLM
                     VVFISAALLGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGT
                     VLTRKWQPPVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAG
                     LTYFLWFRGISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWL
                     GQRSNRTPRARIACRKSP"
     gene            complement(3174..3581)
                     /locus_tag="OQQ57_001974"
     CDS             complement(3174..3581)
                     /locus_tag="OQQ57_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001501368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HCS1956754.1"
                     /translation="MRGRPVLFPNFSLGEEYEHAPPATNRQISPYLPSGRFRTGLPVE
                     GLAIERGDLFYACPRASVFYGTALDADLRTRGVSTLVMAGISTTGVVLSSVAWASDAD
                     YDVRLVQDCCYDPDRDAHEALLRSGFGGRVQVV"
     gene            3570..5321
                     /locus_tag="OQQ57_001975"
                     /pseudo
     CDS             3570..5321
                     /locus_tag="OQQ57_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs1 family transposase"
     gene            complement(5625..6971)
                     /locus_tag="OQQ57_001976"
     CDS             complement(5625..6971)
                     /locus_tag="OQQ57_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001632353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956755.1"
                     /translation="MPMILVKKNPRGKVIRELSSEEETAVKTVCGLKKPATMALHNLA
                     NDILREMREYDAWLQCDCIPGDSPAMNFAALKNNTGTLYLSSFNHEHAPECPMYRQLS
                     GNEEETYSGASRHPVSTRINYRNFLPPDDSNSVIRLQARSAYHNGESSSVRKKRPRLA
                     RLLLSLIDDAGLNKLDSLANPRIRTNYRECLDAIRQVTLQQEYIRGRSLSEIIHFRPG
                     MSERSQERLMETLENSERHWPARRKHMFFQIFMAQHICRDAVEIHWANGNIQVIRPVR
                     GISINGEAQGGIRPPYWVILAFCRSADGRIICSEGYAHALYQLTCPVPVDSKLERNTL
                     TALLNVASWLKRKPGTPELSLERPLFDTEVYVNGEKKYVLPDFIVTARAPDGKTARVV
                     IETMGYEDSDYCARKSRQHTGMKQIGVLHTDPPKWLDNDHPPFEKHMYGVFMHLRY"
     gene            7325..7927
                     /locus_tag="OQQ57_001977"
     CDS             7325..7927
                     /locus_tag="OQQ57_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proQ/FINO family protein"
                     /protein_id="HCS1956756.1"
                     /translation="MGKNQEERKTPVIVVKKRRTFSPPSLSEKTDIIAPVFTEQTAES
                     APAGINSSAVETHIPEAPARKKKKKRHRFPRPSHWTREYTHECVEKIKALFPHLRAEG
                     GGFIPLKIGINNDISAFLAEHPETELTMDEWLCAVSCITSRRVYLQRTAVAGVPRYGL
                     DGHPKGQVSDSEAQSAGRRLATLEQKWLRMQAQQENISGQ"
     gene            7983..8165
                     /locus_tag="OQQ57_001978"
                     /pseudo
     CDS             7983..8165
                     /locus_tag="OQQ57_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001582574.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8165..8431
                     /locus_tag="OQQ57_001979"
     CDS             8165..8431
                     /locus_tag="OQQ57_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956757.1"
                     /translation="MITGNGINTVTVNGKVKHITELDDITLCLEWTKLREENNRLYEI
                     NNQANRGWRGFILRLIGVNLPDKRTEFTQRLLLTRKISGSVMKK"
     gene            complement(8622..8903)
                     /locus_tag="OQQ57_001980"
     CDS             complement(8622..8903)
                     /locus_tag="OQQ57_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001105075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956758.1"
                     /translation="MNYDEITKITAERISDYMTEAVNTDSIAVAEMFHNAAWGVRTLW
                     FELVTKIDIDIHKKNRYASYDLRRKIEMQHEEFQKMTEREQVPLLKSPE"
     gene            complement(9009..9284)
                     /locus_tag="OQQ57_001981"
     CDS             complement(9009..9284)
                     /locus_tag="OQQ57_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HCS1956759.1"
                     /translation="MELKWTSKALSDLARLYDFLVLASKPAAARTVQSLTQAPVILLT
                     HPRMGEQLFQFEPREVRRIFAGEYEIRYELNGQTIYVLRLWHTRENR"
     gene            complement(9284..9568)
                     /locus_tag="OQQ57_001982"
     CDS             complement(9284..9568)
                     /locus_tag="OQQ57_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HCS1956760.1"
                     /translation="MQMKNNTAQATKVITAHVPLPMADKVDQMAARLERSRGWIIKQA
                     LSAWLAQEEERNRLTLEALDDVTSGQVIDHQAVQAWADSLSTDNPLPVPR"
     gene            complement(10473..11345)
                     /gene="repA"
                     /locus_tag="OQQ57_001983"
     CDS             complement(10473..11345)
                     /gene="repA"
                     /locus_tag="OQQ57_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HCS1956761.1"
                     /translation="MAALNQTSFTESTYRQVKNPNPVFTPREDAGTLKFCEKLMEKAV
                     GFTSRFDFAAHVAYARSRGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTL
                     AIECGLATESEAGKLSITRATRALKFLSELGLITYQTEYDPTIGCNIPTDITFTPALF
                     DSLDISEEAVASARRSRVEWENRLRKKQGMDALGMDELIARAWRFVRERFRSYQAELK
                     SHGMKRARARRDAGRTRQDIVTLVKRQLTREIAEGRFRGSLEAVKREIDRRVKERMIM
                     SRNNNYTRLATASP"
     gene            12048..12689
                     /locus_tag="OQQ57_001984"
     CDS             12048..12689
                     /locus_tag="OQQ57_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000335849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusG"
                     /protein_id="HCS1956762.1"
                     /translation="MCLSELQARLNVGQPLFPTHALCIRRSQQHRSPPAGIDFRGAFR
                     ILNISELHQRNWYLAQYIPTGKNREHLFSWLSEQHVLPWTPLILKKVRRTDKVCGYRR
                     HIHAVFPGYFFLKADPESHSFTHLRRHSAFLDFVKMAGEIKTVREDIVQSLMKVYPDP
                     ALNPAAREELDAASTLWLTKARYQYLLRLDAQPLPESRIALLLHLVSDDGALT"
     gene            12829..13491
                     /locus_tag="OQQ57_001985"
     CDS             12829..13491
                     /locus_tag="OQQ57_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="traC"
                     /protein_id="HCS1956763.1"
                     /translation="MTIQSPENPVIQLLENMLEALSTSPDSINNERRRRRFLLNWLDS
                     ARQMSEFRGMPEEFTALRKLLATNTDIPVENTLKSLLESGHNAALYDLYRFRAALATC
                     RSLGWQIGTCAWNDQLLSETLSRAQTGKRHILQLNSTGDTFSTTGRMIRPVAFSLIHP
                     ATINTSEVEEIFRDEGFMLAHGRECSLNGSGRNMLSRILHVGHSGLAEEEWGMDNSLL
                     LH"
     gene            13758..13901
                     /locus_tag="OQQ57_001986"
     CDS             13758..13901
                     /locus_tag="OQQ57_001986"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956764.1"
                     /translation="MTLTLLTAYNAPYLAALTRPLVMPAPEKVPDVSEPVIAPDNSEP
                     QQV"
     gene            13982..14224
                     /locus_tag="OQQ57_001987"
     CDS             13982..14224
                     /locus_tag="OQQ57_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilI type IV pilus biogenesis protein"
                     /protein_id="HCS1956765.1"
                     /translation="MSAEKFRVVIYTNTCEKKVSYISATEDINIAIMPFQTADNGLII
                     VCQNSRIIRRKERIPGSSCEWKDVTLAPKSRNRVQL"
     gene            14340..14660
                     /locus_tag="OQQ57_001988"
     CDS             14340..14660
                     /locus_tag="OQQ57_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001193518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956766.1"
                     /translation="MRTITTREQLLINGRVHERIATHIVTGAHGYETLCTNGYNVRYN
                     KAQQLVESCEKIAEGKLPVTCPVCFTIWQDVHRFTHVDFDTQSGKSDFIDTCHSEIIT
                     GMFQ"
     gene            14901..15971
                     /locus_tag="OQQ57_001989"
     CDS             14901..15971
                     /locus_tag="OQQ57_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcpQ domain-containing protein"
                     /protein_id="HCS1956767.1"
                     /translation="MKKKSLTLLLPSLLSGCTAFNATPVPDTTPPALVFVDGQIRESA
                     AIIAHTQKRLLPPPVTRPVTPPRPTTTATPTTAVSSQSTALPPRPLLQATQLPALVMT
                     GKPGQSSVVYLREAHQRSVSDWIRQLLPPGWQFRQQNAAIPALNKRLPVWSVNDQWHR
                     ALNALLAGQQLYGHMDWNRKILTVTTSATPPVDVTAPQGSQKAADTPRNPFRGSTATP
                     AGPTPVTPAVSVSRAQTTTGTSGTPESRTTTPAPVATKPVVPPQQKVIPPRQWKMEKG
                     TTLKDGLARWTSSEKCPHGTWTLRWETPVNYSIDAPLVFTGSFRQALEQLFALYTPAE
                     KPLYARTSTAQCLLRVTDRPQE"
     gene            15975..16412
                     /gene="pilM"
                     /locus_tag="OQQ57_001990"
     CDS             15975..16412
                     /gene="pilM"
                     /locus_tag="OQQ57_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HCS1956768.1"
                     /translation="MGWVTGFIMVIMAIGNFWFHSHLSRTVHHQQTAEITQQAADFIR
                     YMNAINDYLYQHPERRAAGGQLTSAQLGLPATKNVSHLISQQRVFVWAKEKPGLMGAL
                     LEQSGDSALLARVENGRLLDTRGRRISITLPAVIPDQVIIWMN"
     gene            16444..18063
                     /locus_tag="OQQ57_001991"
     CDS             16444..18063
                     /locus_tag="OQQ57_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001035566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN family type IVB pilus formation outer
                     membrane protein"
                     /protein_id="HCS1956769.1"
                     /translation="MNKKLLAIMIAATLLQGCTSFRQAENTRKDAVAEQQRAREMIAE
                     LRNRTPVVKESPRQWINPRPVTDKNPGNAVPGCPIIINTRQSITLQQVAQRISENCHI
                     PVRITPDVQAYLSVTTSGSTQQIQGTVPPPDTGGMVPLAAIGSSDTTLPRLQGNTASL
                     PELKASGLTSLLNAVASRLGISWRYDGSHITFYYLDTRTFPVTYMDSQVAYNATVVSG
                     TMSSNGSSGGTASDAISGDASNTQTTTVDMKSALYQDVKNAVSSMLTPGIGRMFMSTG
                     FITVTDTPQVLETVRTFIEKRNEEMKRQVVLNVEILSIRKTRNEQAGIDWNAVFSDRT
                     LGLSLGSTFTSAASDTVTGGVSIVNGKLTGSKAFLKALSSQGDVSVVTRNSAVTKNLT
                     PVPMQIANQQSYIESVTTDTTANVGSSTSLNAATITTGFNMTLLPFILPDSQTLQLLY
                     SMSLSDKPVIENYESGGSKAQLPNVDLKTINQTVDLKSGQTVIISGFQQSGRRSGKQG
                     VGTPGFFGLGGGINSENDDTILVVLITPNII"
     gene            18084..19379
                     /gene="pilO2"
                     /locus_tag="OQQ57_001992"
     CDS             18084..19379
                     /gene="pilO2"
                     /locus_tag="OQQ57_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001597533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4b pilus protein PilO2"
                     /protein_id="HCS1956770.1"
                     /translation="MTDISPTERQVFPLTAGRNVFLAGMDWKTLPASHKNPRTFARSL
                     GAVRYISCEYLSTEDTDRHIMVAAVSQNTLPKGSRRYFSLAMLILPLLEPGGYAIVEL
                     SQANDTELYGFVSAVDGILVSDLVGTREEIREAREIFLTINSAPEHGWTCYEPPSFNG
                     PDGRGPLPLETLTGAGKYPAEARLHPVSRGPQLIPVLLILTLLGTAWYGWQYYERLKA
                     EKAALAEAAQKAAEERITPPWLSMPETGDFIRGCSDVWSRLPVSVAGWRYSLAECAAT
                     GNSGNLRASYTNIAGTTVTAFSQRVREIFSIRPFMVMPDGNSGGFALPVTFSMPETPV
                     AVEALPENTLLQERLTTLARSMQLKMDWQEVSNSFTDEDGNTIQPPWKEYDLQILTTL
                     PAHQVAEHFSEPSVRFISVTRQLEEGRFRYQFTGKYYVQ"
     gene            19369..19827
                     /gene="pilP"
                     /locus_tag="OQQ57_001993"
     CDS             19369..19827
                     /gene="pilP"
                     /locus_tag="OQQ57_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilP"
                     /protein_id="HCS1956771.1"
                     /translation="MSSKTKALLLSVLILPTTVAASTISNMQQNNRQLQVEQIQEETA
                     LYEAMLAREKVRHELRTLEQGEPAEPVHSQESSSAVTTDTPAPITGIPRLTEISGVQP
                     QITARIQLPGGQTADVKEGQHIPGTTFRVEKITTDSVVLEQNGIRTTLQP"
     gene            19931..21439
                     /gene="tadA"
                     /locus_tag="OQQ57_001994"
     CDS             19931..21439
                     /gene="tadA"
                     /locus_tag="OQQ57_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HCS1956772.1"
                     /translation="MLAPADQPPDDILEYVVVDTDKTGQIHVRVVEGKKHLRAVQDYL
                     TRLCSRYPGKVSPFEFTTLDVIARLRQETVISGVENGINPVQQKMLGYISHAATLSAS
                     DLHITPGRDSTDFTYLEARVHGELELLDIVRKDEGLELLGATYSGMTDVIKGTQFDPG
                     VPQDARLAERFLKLAGLFGARYSHYPCVGGLYAVLRLIKDDSQHIPTFSMLGYHPEQE
                     RAVRRMLQRPEGIVILSGPTGSGKSTTLRTASAAYLEQYGFNDTGGILLPRRRLFTIE
                     SPPEGRIPGAIQTAVMDTAQGWVDSVKSALRLDPDAILNGEIRDHASAITAIKAAMTG
                     HLMLTTLHANDPINILERLEMEGVQARMIADPQLFIGLLSQRLVQVICPHCRLPWHEV
                     ESSRTDEERRLVENFCQPDAVYLRNHNGCPHCWRGVNGRTVIAEVISPDAKFFQIYRE
                     KGRIEAKTYWHRELGGMTRNQHLLGKINSGQVDPLAAHYISPVDEDSYTLLH"
     gene            21441..22535
                     /locus_tag="OQQ57_001995"
     CDS             21441..22535
                     /locus_tag="OQQ57_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000697158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HCS1956773.1"
                     /translation="MKILERLNNTELELSGLNRWLGKKTFRRTTFYESLAGMIRDGTP
                     VMRALEFICDVETDFGKKKGQSGLYFLATDCIASIRSSGQLSPALKDWVPKDEIALIR
                     NGEERGDIAEAMFQVVKTAKGRQEMISSLVSVCLYPLILLTLCVVNMYNVHTRVIPMI
                     SAFAPEERWSVQMVILAKSSGLVIGYGLWLLAGLLLLAILIRMSFSLYTGPRRRYLDR
                     IPPWSLYQTFHGVNYLFNISSMLQINIPLSHALTRIEKHAEHNRWLKSRISAIRKNVL
                     SGQSLALAMKNCGYDFPSKSCVNNLLLNSEREDSVASMALYADRWLEEAKKNVRKSGI
                     IITAISGLLVFLFIINMVSAIYGISDMLKQ"
     gene            22597..>22804
                     /locus_tag="OQQ57_001996"
     CDS             22597..>22804
                     /locus_tag="OQQ57_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCS1956774.1"
                     /translation="MSVITSSYSEHNIRHLQNDDKGMTLLEVLGVLVVAAIVIGAVMG
                     LMSDTLSSSDNQKELKNLQTIATKM"
BASE COUNT         5513 a         6299 c         5865 g         5127 t
ORIGIN      
        1 cgccagagag gccgagcgcg gccgtgaggc ttggacgcta gggcagggca tgaaaaagcc
       61 cgtagcgggc tgctacgggc gtctgacgcg gtggaaaggg ggaggggatg ttgtctacat
      121 ggctctgctg tagtgagtgg gttgcgctcc ggcagcggtc ctgatcaatc gtcacccttt
      181 ctcggtcctt caacgttcct gacaacgagc ctccttttcg ccaatccatc gacaatcacc
      241 gcgagtccct gctcgaacgc tgcgtccgga ccggcttcgt cgaaggcgtc tatcgcggcc
      301 cgcaacagcg gcgagagcgg agcctgttca acggtgccgc cgcgctcgcc ggcatcgctg
      361 tcgccggcct gctcctcaag cacggcccca acagtgaagt agctgattgt catcagcgca
      421 ttgacggcgt ccccggccga aaaacccgcc tcgcagagga agcgaagctg cgcgtcggcc
      481 gtttccatct gcggtgcgcc cggtcgcgtg ccggcatgga tgcgcgcgcc atcgcggtag
      541 gcgagcagcg cctgcctgaa gctgcgggca ttcccgatca gaaatgagcg ccagtcgtcg
      601 tcggctctcg gcaccgaatg cgtatgattc tccgccagca tggcttcggc cagtgcgtcg
      661 agcagcgccc gcttgttcct gaagtgccag taaagcgccg gctgctgaac ccccaaccgt
      721 tccgccagtt tgcgtgtcgt cagaccgtct acgccgacct cgttcaacag gtccagggcg
      781 gcacggatca ctgtattcgg ctgcaacttt gtcatgcttg acactttatc actgataaac
      841 ataatatgtc caccaactta tcagtgataa agaatccgcg cgttcaatcg gaccagcgga
      901 ggctggtccg gaggccagac gtgaaaccca acagacccct gatcgtaatt ctgagcactg
      961 tcgcgctcga cgctgtcggc atcggcctga ttatgccggt gctgccgggc ctcctgcgcg
     1021 atctggttca ctcgaacgac gtcaccgccc actatggcat tctgctggcg ctgtatgcgt
     1081 tgatgcaatt tgcctgcgca cctgtgctgg gcgcgctgtc ggatcgtttc gggcggcggc
     1141 cggtcttgct cgtctcgctg gccggcgctg ctgtcgacta cgccatcatg gcgacggcgc
     1201 ctttcctttg ggttctctat atcgggcgga tcgtggccgg catcaccggg gcgactgggg
     1261 cggtagccgg cgcttatatt gccgatatca ctgatggcga tgagcgcgcg cggcacttcg
     1321 gcttcatgag cgcctgtttc gggttcggga tggtcgcggg acctgtgctc ggtgggctga
     1381 tgggcggttt ctccccccac gctccgttct tcgccgcggc agccttgaac ggcctcaatt
     1441 tcctgacggg ctgtttcctt ttgccggagt cgcacaaagg cgaacgccgg ccgttacgcc
     1501 gggaggctct caacccgctc gcttcgttcc ggtgggcccg gggcatgacc gtcgtcgccg
     1561 ccctgatggc ggtcttcttc atcatgcaac ttgtcggaca ggtgccggcc gcgctttggg
     1621 tcattttcgg cgaggatcgc tttcactggg acgcgaccac gatcggcatt tcgcttgccg
     1681 catttggcat tctgcattca ctcgcccagg caatgatcac cggccctgta gccgcccggc
     1741 tcggcgaaag gcgggcactc atgctcggaa tgattgccga cggcacaggc tacatcctgc
     1801 ttgccttcgc gacacgggga tggatggcgt tcccgatcat ggtcctgctt gcttcgggtg
     1861 gcatcggaat gccggcgctg caagcaatgt tgtccaggca ggtggatgag gaacgtcagg
     1921 ggcagctgca aggctcactg gcggcgctca ccagcctgac ctcgatcgtc ggacccctcc
     1981 tcttcacggc gatctatgcg gcttctataa caacgtggaa cgggtgggca tggattgcag
     2041 gcgctgccct ctacttgctc tgcctgccgg cgctgcgtcg cgggctttgg agcggcgcag
     2101 ggcaacgagc cgatcgctga tcgtggaaac gataggccta tgccatgcgg gtcaaggcga
     2161 cttccggcaa gctatacgcg ccctaggagt gcggttggaa cgttggccca gccagatact
     2221 cccgatcacg agcaggacgc cgatgatttg aagcgcactc agcgtctgat ccaagaacaa
     2281 ccatcctagc aacacggcgg tccccgggct gagaaagccc agtaaggaaa caactgtagg
     2341 ttcgagtcgc gagatccccc ggaaccaaag gaagtaggtt aaacccgctc cgatcaggcc
     2401 gagccacgcc aggccgagaa cattggttcc tgtaggcatc gggattggcg gatcaaacac
     2461 taaagctact ggaacgagca gaagtcctcc ggccgccagt tgccaggcgg taaaggtgag
     2521 cagaggcacg ggaggttgcc acttgcgggt cagcacggtt ccgaacgcca tggaaaccgc
     2581 ccccgccagg cccgctgcga cgccgacagg atctagcgct gcgtttggtg tcaacaccaa
     2641 cagcgccacg cccgcagttc cgcaaatagc ccccaggacc gccatcaatc gtatcgggct
     2701 acctagcaga gcggcagaga tgaacacgac catcagcggc tgcacagcgc ctaccgtcgc
     2761 cgcgaccccg cccggcaggc ggtagaccga aataaacaac aagctccaga atagcgaaat
     2821 attaagtgcg ccgaggatga agatgcgcat ccaccagatt cccgttggaa tctgtcggac
     2881 gatcatcacg agcaataaac ccgccggcaa cgcccgcagc atcgcgaccg tcatcggtga
     2941 gaagttcggc aggtattggg tggtgacaat gtaggtgctg ccccaaatgg caggtgctat
     3001 cgctgtgaac aataaatcgg gcgtgcgtaa tgacatgcga ttacaagacc tccgctacgg
     3061 cgatgggttt ttgagagttg caggcgccgc gatgaccgca ccctgacttg gactggccct
     3121 gcctcgcacc aatccacctg cggctatggc cgcgatcatg cgaggcccga aaattacacg
     3181 acctgtacac gtccgccgaa cccggaacgc aacagagctt cgtgggcatc ccgatccggg
     3241 tcgtagcagc agtcctggac caaacgcacg tcgtagtccg catcactagc ccaggcgacg
     3301 cttgaaagaa caacgccggt ggtgcttatc ccggccatga caagcgtgct tacgccgcgc
     3361 gtccgaaggt cggcgtcgag cgccgtgcca taaaagacgc tggctcgcgg acatgcatag
     3421 aaaaggtcgc cccgttcgat cgcaagccct tcgacgggca gaccggtgcg aaatcgtccg
     3481 ctcgggagat acggtgagat ttggcgattc gtcgccggcg gcgcatgttc atactcttcg
     3541 ccgagcgaaa agttggggaa cagcacgggc cggccgcgca aggcgtgctg gcagccgtgc
     3601 agaccctgcg tgagatgaac gccgacaacc tgcgcaaggt gccggccgat gcacccacgg
     3661 ccttcatcaa gccgcgctgg aagccgctgg tgatcacccc ggaaggcctc gaccggaaat
     3721 tctacgaaat ctgcgccctg tccgagctga agaacgccct gcgctccggc gacatctggg
     3781 tcaagggctc gcggcagttc cgcgacttcg acgactacct gctgccggcc gagaagttcg
     3841 ccgcactcaa gcgcgagcag accctgcccc tggcgatcaa cccgaacagc gaccagtacc
     3901 tggaagagcg tttgcagctg ctggacgagc agttggccac cgtcacccgc ctggccaagg
     3961 acaacgagct gcccgatgcc atcctcaccg agtcagggct gaaaatcacc ccgctggatg
     4021 cggcggtgcc ggatcgggcg caggcgctga tcgaccaaac cagccagtta ctgccgcgca
     4081 tcaagatcac cgaactgctg atggacgtgg acgactggac gggcttcagc cgccacttca
     4141 cccacttgaa ggacggggcc gaggccaaag acaggacgtt gctgctgtcc gcaatcctcg
     4201 gtgatgcgat caacctcggg ctgaccaaga tggccgagtc gagccccggc ctgacctacg
     4261 ccaagctgtc ctggctgcaa gcctggcaca tccgcgacga aacctattcg gcggccttgg
     4321 ccgagctggt caaccaccag tatcgccacg cctttgccgc ccactggggc gacggcacga
     4381 cctcatcctc cgatggccag cgcttccgcg cgggtggccg gggcgagagc accgggcacg
     4441 tcaacccgaa gtacggtagc gagccgggac ggctgttcta tacccatatc tccgaccagt
     4501 acgcgccgtt cagcacccgc gtggtgaatg tcggcgtccg cgattccacc tatgtgctcg
     4561 acggcctgct gtaccacgag tccgacctgc ggatcgagga gcactacacc gacacggccg
     4621 gcttcaccga tcacgtcttt gccctgatgc acctgctagg cttccgcttc gcgccgcgca
     4681 tccgcgacct cggcgaaacc aagctgtacg tgccgcaggg cgtgcaagcc tacccgacgt
     4741 tgcgcccgct gatcggcggc accctgaaca tcaagcacgt gcgtgcccac tgggacgaca
     4801 tcctgcgcct ggccagctcg atcaagcagg gcaccgtcac cgcctcgctg atgctgcgca
     4861 agctcggcag ctacccgcgc cagaacggac tggccgtggc cctgcgcgag ctgggccgga
     4921 tcgagcgcac gctgttcatc ctggactggc tgcaaagtgt tgaactgcgc cgccgcgtgc
     4981 atgccggcct gaacaaaggt gaggcgcgca actcgctggc cagggcggtg ttcttcaacc
     5041 gccttgggga aatcagggat cggagcttcg agcagcagcg ctaccgggcc agcggcctca
     5101 acctggtgac ggcggctatc gtgctgtgga acacggtgta cctggaacgc gccacccagg
     5161 ggttggtcga ggccggcaag ccggtggacg gcgagctgct gcaattcctg tcgccgctgg
     5221 gctgggagca catcaaccta accggcgatt acgtctggcg gcagagccgc agactggaag
     5281 acgggaagtt tcggccctta cggatgcccg gaaaacctta gcgtacgatt ttttccgaat
     5341 tctgcgggct cccctccttc atcctctgag gaaaacaaat gaattaactg cttacgcata
     5401 tggatacata tacagtatta atttattaag gagaaaatgg catgtcaaga tttaatgata
     5461 gtgattatca ttaacatgaa gtaatgttac accgttcaga aagcctgctg acgctgtggc
     5521 agcatcacag tctgagtatt ctctggtgca atacaaaaac cggactttcc cgtaacaaca
     5581 gacaatgtta cgggaaaagt tacagaactg agccacaaaa tatctcagta cctgagatgc
     5641 ataaaaacac cgtacatatg tttctcaaaa gggggatgat cgttatccag ccatttcggt
     5701 ggatcggtat gcagaacacc aatctgcttc atgccggtat gctgcctgga ttttctcgcg
     5761 cagtaatcac tgtcttcata tcccatcgtt tcgatgacca ctctggccgt ctttccgtca
     5821 ggagcccttg ctgtgacaat gaaatccggc aggacatatt tcttttcacc attaacataa
     5881 acttctgtat caaacagggg cctttccaga cttaattccg gcgtacctgg ctttctttta
     5941 agccagctgg ccacattcag aagagcagtg agcgtgtttc gttccagttt gctgtccaca
     6001 ggcaccggac atgtcagttg ataaagagca tgagcatacc cttcactgca gatgattctg
     6061 ccatcggcac tccggcaaaa agcaagaata acccagtaag ggggacgtat tccgccctgc
     6121 gcttcaccat taatactgat cccccgcaca ggtctgatga cctgaatatt accgttcgcc
     6181 cagtgaattt ccacagcatc acgacagatg tgctgcgcca taaaaatctg aaagaacata
     6241 tgttttcttc tggcaggcca gtgtcgttct gaattctcca gcgtttccat taaccgctcc
     6301 tgagaccttt cagacattcc aggccggaaa tggataattt cagataagga tcttccccga
     6361 atatactcct gctgcagtgt aacctgccgt atggcatcaa gacactcacg ataattagtc
     6421 cggatacggg gattagccag ggaatccagt ttattcagcc cagcatcgtc aataagagac
     6481 aggagtaaac gggcaaggcg cggacgtttc ttgcgaacgg aggagctctc accattatgg
     6541 taagcagagc gggcctgcag tctgataaca gaattactgt catcaggtgg taaaaagttt
     6601 ctgtaattta tacgggtgct aacgggatgc cggcttgctc cggaatatgt ttcctcttca
     6661 tttccggata actgacgata catggggcat tcaggtgcat gctcatgatt aaaactggac
     6721 agataaagag tacccgtatt gtttttaaga gcagcaaaat tcatggccgg cgaatctccc
     6781 ggaatacagt cacactgtaa ccatgcatca tactcacgca tttcccggag aatatcattg
     6841 gccaggttat gtagtgccat ggttgctggc tttttcagtc cacagaccgt ctttactgca
     6901 gtctcttcct cactgctaag ctcccgaatc actttgcccc ggggattctt ctttacaagt
     6961 atcattggca taatgaaagc actccttatg tacatgctta aacagtaagt aaaatataca
     7021 aagaacaccc catgaaacaa aggcagagat gaactgtgcg ccccgatatc ttcttctgat
     7081 atcctttcaa atgaattgtt tttatttata tcatgacaac attaaagtga gagaatatat
     7141 caaccatgtt tctgtcaggg ttcagtagaa tatcaattcg actgtcacgc cataactgtt
     7201 actacctcga gtataaatac tcagagaacg gacttattag ccatgaaaaa tcacctgatg
     7261 ggaaatttac taatttatga attgtgatat tattaaagag taaaaccagc cagccgaggt
     7321 atttatggga aaaaatcagg aagaaaggaa aactcccgtc attgtggtga aaaaacgtcg
     7381 tactttttcg ccaccgtcct tatccgaaaa aacagatatt atcgcacctg tatttactga
     7441 acagacggca gaatcagccc ccgccggaat aaattcatct gccgtcgaaa cacatatccc
     7501 cgaagcgcca gccaggaaga agaaaaagaa aagacaccgt tttccacgtc cctcccactg
     7561 gacccgtgag tatactcacg agtgcgtgga aaaaataaag gccctgtttc ctcatcttcg
     7621 tgctgaaggt ggtggattta ttcccctgaa aattggcata aacaatgata tatcggcatt
     7681 tctggcagaa cacccggaga cagaactgac catggacgaa tggctctgtg cagtgtcctg
     7741 catcacatcc cgccgcgtat atctgcagcg gacagctgtc gccggcgtcc cacgttatgg
     7801 cctggatggt caccccaaag ggcaggtctc agactctgaa gcacagagtg ccggtcgcag
     7861 actggcgaca ttagaacaaa agtggctcag gatgcaggca cagcaggaga atatttctgg
     7921 gcaataaaca ctcctgataa caggtggaca ttacgtatca gaaaaaatgg gaagagaatg
     7981 ttatgtgtga ttcagaagcg gagaagattt tattcatcct gaataaacat gaacgggcat
     8041 acagatgcca gtaccccgta taacttgata acatcaggaa ttttattgat aaacagcagt
     8101 taacgaatag tgatactccg aagaaaagca cggtcccaaa tgaagataaa aaaggcataa
     8161 gatgatgatc acaggaaatg gaataaacac tgtaactgtc aatggaaaag tgaaacacat
     8221 cacagaactg gatgatataa cactttgttt agagtggaca aaactacgag aggaaaacaa
     8281 tcgtctttat gaaattaata accaggcaaa cagaggatgg cgtggtttca tcctaagatt
     8341 gataggggtt aacctgccag ataaaaggac tgagtttaca caacgtctct tattgacgcg
     8401 caaaatttcg ggttcggtca tgaaaaagta acatattcta tgctggaaca gaccaatttt
     8461 gcattcgccg tccaggagtt tgaggggaaa gtagtcagtg tttacgctca gtcggggaaa
     8521 gtgtgcaatg ataaacaaca cgaaaggaat cgtagtacat gggcaccgcg attcaatatt
     8581 caaggaaaac acaatacagc aatgtacttg tactgtttct attattctgg cgatttcaat
     8641 aaaggcactt gctcgcgctc tgtcattttc tgaaactctt catgctgcat ttcgattttc
     8701 cttctaagat cataactcgc atacctgttc tttttatgta tatctatatc tatttttgtg
     8761 acgagttcaa accacaatgt tcgcactccc caggcagcgt tatgaaacat ttccgcaacg
     8821 gctatagagt ctgtattaac tgcttcggtc atgtagtcgc taatacgttc agcggtaatt
     8881 ttcgttattt catcgtaatt cattttatct cctacaagat tatttaatgg aatgaaaaat
     8941 atctggcctg ataataatgt tccagaatta atatctgcag gctatgttaa gttgtcccca
     9001 cacacaatct acctgttttc tcgtgtgtgc cacaggcgca atacataaat agtctggcca
     9061 ttaagttcgt aacggatttc gtactcgcca gcaaaaatcc gtctgacctc cctgggttca
     9121 aactgaaaca actgttctcc catacgtgga tgagttaaca gaatgaccgg tgcctgtgtc
     9181 agggattgca ccgttctggc ggccgcaggt ttactggcca gcaccagaaa atcatataac
     9241 cgcgccaaat cagaaagcgc cttactggtc cacttcagtt ccatcagcgt ggcaccggta
     9301 acggattgtc agtactgagg ctgtccgccc aggcctgtac agcctgatgg tcgataacct
     9361 gtccggatgt cacatcgtcc aaggcttcca gcgtcaggcg attacgctcc tcctcctgag
     9421 caagccatgc agaaagcgcc tgtttgataa tccagccccg ggagcgttcc agtctggcgg
     9481 ccatctggtc gactttatca gccataggta atggcacatg cgcggtaatt acttttgttg
     9541 cctgtgcggt attgtttttc atttgcatat ccgattagct gttaatcata tttaatcata
     9601 gtgattactt tcagacgaaa caaggcaaat aatgcgcgtc agcgcatgta aggcggcact
     9661 ccgttgttac atatggcaca gaaacaaaac cgccgaagcc cggcgtcagc cggtactgat
     9721 tgatagattt caccttaccc atccccagcc ctgctaagcc atacccgttt tcagccatga
     9781 cagagcttct gtgcgcggtc ggagtggtcc cgacgagggt ttacccgaag tcggggcgta
     9841 tctccgcgtt agcgggccga gagggccgct tacgagcgtg tattcagtac gtccagccag
     9901 aagactgaca gcgatgatgc tgcttagtta caacattcat aattaaaagc gatgttgttc
     9961 ccgccctttg ggcgggggcg gcctcgcttt tcagttatga ggggtaggca cggtgctgcg
    10021 tttgtgtggt gtttttattc ctgatgtctt tttgctgtgg tttcagaacg gtgaggttcg
    10081 gggcccgcgc gtcagcgtgg gaggtgcata tcagtctgtc cacaggacag gcattgaaca
    10141 ggttttcttt ttaaatggaa gtaattaagt agtttaaagg aaatacagta ctggagttta
    10201 aaagaaacat tgcaccctgt aacgcctgcg gctggcgctt tatagcatta acggttgtaa
    10261 ccttatggag aagtcccttg cagttaaatg tggataaaca gaattacccg tctgtgagac
    10321 gtgttttgcg tgaaaaacag ggggagcatg atgagccgga aggcagatga tgaggctgtt
    10381 ttttgtgtgc tgtgctgctt ttttgtgcgt cgccgggctt cagacgtgcg gaagcctccg
    10441 gcgcaggccg gattattcag atgaggtcaa actcagggtg aggcagtggc cagccgtgtg
    10501 tagttgttgt tccgcgacat tatcatgcgt tccttcacgc gacggtcgat ttcgcgcttc
    10561 acggcctcca ggcttccgcg gaaacgccct tccgcgattt cacgtgtcag ctgccgtttc
    10621 accagggtga caatgtcctg acgggtcctg cctgcatcgc ggcgcgcacg ggcacgtttc
    10681 atgccgtggg acttaagctc tgcctgataa ctgcggaaac gctcgcgcac aaaacgccag
    10741 gccctcgcta tcagttcatc catacccagc gcatccatcc cctgcttttt gcgcagcctg
    10801 ttttcccatt ccacgcggct gcggcgtgcg gaagccactg cctcttctga gatatcgagt
    10861 gagtcaaaca gtgccggcgt gaacgtgatg tcggtcggga tgttacagcc aattgtcggg
    10921 tcgtattccg tctggtaggt tatcagcccc agctcagaca ggaacttcag ggcacgggtg
    10981 gcacgggtga tggaaagttt cccggcctca gactccgtcg ccagtccgca ctcaatggcc
    11041 agcgtggtga tggagcactg cacgcggttg gccagcgggt catagtggaa acacagcccc
    11101 tgcagcagcg catcaatcgc ccggcggcgc agcaccggcg gcatacgccg gcgcaggccg
    11161 cgcgaacggg catacgccac atgcgcggca aaatcaaaac gggaggtgaa gcccacggcc
    11221 ttttccatca gtttttcgca gaacttcagc gttccggcat cttcacgggg tgtgaacacc
    11281 ggattcgggt tctttacctg acggtatgtg ctttcagtga atgaggtctg gttcagggcc
    11341 gccacaagct gtcgcttatg gcgggaacag attgccgtgc gttaatgcac tgcgaagggt
    11401 tgaatctctg acacggtttc atatatactt atcccgtatt ctgtgaggcc cccattatct
    11461 ttcagtgatt ccgccaagtt tcgatgaaag attatggggg ttttccttta tggtcttctg
    11521 aaactttttt cagccttccg gccccggcaa acagccgtcg tttctgccat acatcctgaa
    11581 tgccttatgg cgcatcctgc cgttttctga ctttccggat cgtgaggatc ccaaaagtca
    11641 ctgcataacg atccgcaata tacccctttt ccaccgcttt gaaaagccga cacgatttct
    11701 ctgatttacc tggcctctca ttaaccacct aaaaagcgtc gtttttttga actgtgtcaa
    11761 aaaaatgaac aatttcacaa acgatctttt atgctgcttt tttcttcttt tccagtagaa
    11821 gagatcgccg aattttttta aacgatctaa tatcccgcac acaatatcaa atacagaata
    11881 atattctgtc ttatcagata taacgatcta ttcaactgct tatcttcgct cttgccacag
    11941 atacatcctt atgtaatata ttttccagcc attaatcctg tttgcaggag ttgtcggttt
    12001 tcgcccgcct cgaaaccgtc cacaaggctt acaagagtgc gtaaatcatg tgcctgtcag
    12061 aactgcaggc caggctgaac gtgggtcagc cgctgtttcc gacacatgct ttatgtattc
    12121 gccgttcaca acaacatcga agcccccctg cggggatcga ttttcgcgga gcgttccgga
    12181 ttttgaatat cagtgaatta catcaacgca actggtatct ggcacagtac atccctaccg
    12241 gcaaaaaccg cgaacatctc ttttcctggc tttccgaaca acacgtcctt ccctggacac
    12301 ccctgatact gaaaaaggtc cgccgcacgg ataaagtctg tggttaccgt cgacatatac
    12361 acgccgtgtt tcccggttac tttttcctga aagcagaccc cgaaagccac agcttcactc
    12421 accttcgccg tcacagtgcc tttctggact tcgtgaaaat ggccggtgaa atcaaaaccg
    12481 tcagggagga tatcgttcag tctttgatga aagtgtaccc ggatcctgcg ctcaatccgg
    12541 cagccaggga ggagctggat gctgcctcca ccctctggct gacaaaagcg cgttaccagt
    12601 acctcctccg gcttgatgcc cagcctctgc cggagtcgag gatcgccctg ctcctgcacc
    12661 tggtatctga tgacggagcg ttgacatgaa aattgctgtc ttcatttgac gactttcccg
    12721 gcctttatgg ccgggctttt tttccccatc ttttccccaa tgcccggcac cggtgacacc
    12781 tgcgtgtacg gagagcggct gccgggcatt ttttttcagg acatcgttat gaccattcaa
    12841 tccccggaaa accctgtcat tcagttactg gagaatatgc ttgaagcgct ctccacctcc
    12901 ccggacagca tcaacaatga acgacgtcgc cggcgcttcc tgctgaactg gcttgattcc
    12961 gcccgacaga tgagtgagtt cagggggatg cctgaagagt tcaccgccct gcgcaaactg
    13021 ctggccacca atacggacat accggtagag aacacgctga aatcactgct ggaaagtggc
    13081 cacaacgcag cactgtatga cctgtaccgc ttccgagcag cgcttgccac gtgcaggagt
    13141 ctgggatggc agattggcac gtgcgcatgg aatgaccagt tactgagtga gacactttcc
    13201 cgcgcacaga ccgggaaacg tcatatcctg cagctgaaca gcaccgggga caccttttcc
    13261 accacgggca gaatgatcag accggtggca ttttcattaa tccatccggc caccatcaac
    13321 acgtctgagg ttgaagagat attccgggat gaaggtttta tgctcgcaca cgggcgcgaa
    13381 tgcagtctga acggcagcgg cagaaatatg ctgtcacgca ttcttcatgt gggccattca
    13441 ggtttagcgg aagaggaatg gggcatggac aacagtctgc ttttacactg aaataccggg
    13501 acagccacaa cggcagccac tctccgctga ctttttttcg caaatcgcgg tttgctgatg
    13561 tggatgtccc atttttgatt atccgtcctc tccggttgtc ataaggcgca ttccggcgtg
    13621 aggcttctgt tgttatcatc ccctcctgca gacatcccct tgtcttctga tgactgacga
    13681 tatgcttctt ctgacaatta aagaagcgga agcttcacgc cataatgttg tttgactgac
    13741 ctgccacagg aggaaaaatg acactgacgt tacttaccgc gtataacgca ccctatctgg
    13801 cagccctgac acgtccactg gtcatgcctg ccccggaaaa ggttccggat gtcagcgaac
    13861 cggtaatcgc tccggataac tcagaaccac aacaggttta atccccgtgc cggaattttt
    13921 ccggcatctt tttcacaaag aatgccctca cgggatattc tggtttaaag gaggattgaa
    13981 aatgtccgca gaaaaattca gagttgtcat atacaccaat acatgtgaaa agaaagtcag
    14041 ttatatttct gcaacagaag atataaacat cgctataatg ccatttcaga cggcagacaa
    14101 tggcttaatt attgtgtgtc agaactcccg tataatacga cgcaaagagc gtatccccgg
    14161 aagcagctgt gaatggaaag atgtgacatt agcaccaaaa tccagaaacc gcgttcagtt
    14221 atagcctgac agcctgcttc tcatctccca taaaagggga taaaaattaa atatttcaca
    14281 accgcgatat ttttcaggaa tgcagattat tttctgttat gaccaatgga gaaacaggca
    14341 tgagaacaat cacaacacgt gaacaattat taattaatgg gagagtccac gaaagaatcg
    14401 ccacacatat agttacagga gctcatgggt atgaaacgct ttgcacaaat ggctataacg
    14461 tcagatacaa caaggcgcag caactggttg aaagctgcga aaaaatagct gaaggtaaac
    14521 tacctgttac ctgtcctgtc tgtttcacca tatggcagga tgtacacaga ttcacccacg
    14581 ttgactttga cacacaatcg gggaaaagtg attttattga tacctgccat tcggagatca
    14641 taaccggcat gtttcaataa caggcaagaa ataaaataat gttcaagttc tgaaaaacaa
    14701 tatcacttgt tttctggaaa ctatcatttg cagcaggacg tttttctttt tatatttccg
    14761 gaaccggaat gttttagttt tcataatcac cccgaacatg aatgttcatc atcaatatcc
    14821 tgatgaaatt atatttatct gaagacctgt taccagccac ctgtcttata ccgtaacccg
    14881 atacataccg gatttattct atgaaaaaga aatcacttac actccttctg ccgtcattac
    14941 tcagcggctg tacggcattt aatgccacgc ctgttcctga caccacgcct ccggctctgg
    15001 tgttcgtcga cggacaaatt cgcgaaagcg ctgccattat cgcccatacg caaaaacgtc
    15061 tgcttccgcc accggtgacc cgccctgtga cgccgccccg cccgacaaca acagcgacgc
    15121 ccacaaccgc agtcagcagc cagagtaccg cactgcctcc ccgtccgctc cttcaggcca
    15181 cacagctgcc cgcactggtt atgaccggta aacccggtca gtcatccgtc gtttatttac
    15241 gtgaggcaca tcagcgctcc gtcagtgact ggatacgcca gttgctacca cccggctggc
    15301 agttccggca acagaacgct gccataccgg cactgaacaa acgcctcccc gtctggtccg
    15361 ttaatgacca gtggcaccgg gcactgaatg cgctgctggc cggccagcag ctttacggac
    15421 atatggactg gaacaggaaa atactgactg tcacgacctc tgcaacaccg ccggtcgacg
    15481 tcacggcacc gcagggttca cagaaagctg ctgatacacc gcgtaatccg ttcaggggca
    15541 gcaccgcaac gccggcaggc ccgacaccag tgacacctgc cgtcagcgtt tcccgggctc
    15601 agaccaccac cgggacatcc ggaactccag agagcagaac aaccacgcca gccccggtgg
    15661 ccacgaaacc ggtagtgcca ccacagcaga aggtcatacc gccacggcag tggaaaatgg
    15721 aaaaggggac caccctgaaa gacggactgg cccgctggac atcatccgaa aaatgcccgc
    15781 acggcacatg gacactgcgc tgggaaacac ctgtcaacta cagcatcgat gcccctctgg
    15841 ttttcaccgg cagtttccgc caggcgctgg agcagctctt tgcactctat accccggctg
    15901 aaaaaccgct gtatgcccgg accagcactg cacaatgcct gctccgtgtg acagaccgcc
    15961 cgcaggaata acctatggga tgggttacgg gtttcattat ggtcattatg gccattggta
    16021 atttctggtt ccacagtcac ctcagccgta ctgtgcacca tcagcagacc gctgaaatca
    16081 cacagcaggc tgcagacttt attcgttata tgaatgccat caacgattac ctgtatcagc
    16141 accctgaacg acgtgctgcc ggtggtcagc tcacgtcagc acagctcggt ctgcccgcca
    16201 cgaaaaacgt cagccacctc atcagtcagc agcgcgtttt tgtctgggca aaagaaaaac
    16261 ccggccttat gggtgccctc ctggaacaaa gtggtgattc ggccctgctt gccagagtgg
    16321 aaaacggtcg cctcctggac acccgtgggc ggcgtatttc catcacgctc cctgctgtga
    16381 tccccgatca ggtcatcatc tggatgaatt aggccggact ctgaataact cacggattta
    16441 tctatgaaca aaaaacttct tgctattatg attgcagcca ctctgctgca gggctgtacc
    16501 agtttccgac aggcagagaa caccagaaaa gacgccgttg ctgaacaaca acgggcccgg
    16561 gaaatgatcg ctgagctgcg aaaccggaca ccggttgtaa aggaatcccc acgtcagtgg
    16621 atcaatcccc gtccggtcac ggataaaaac cccggtaatg cggtgcccgg ctgtccgatt
    16681 atcattaaca cccggcagag catcaccctt cagcaggtgg cccagcggat ctcggaaaac
    16741 tgtcatattc ctgtaaggat cacccctgat gtacaggcgt atctgagcgt gaccacctcc
    16801 ggcagtacgc agcaaatcca gggcacagta ccaccgccgg ataccggcgg tatggttcca
    16861 ctggccgcca taggcagttc tgacacgaca cttccccgcc tgcagggaaa tacggcgtca
    16921 cttcctgaac tgaaggcttc aggactgaca tcactgctga atgcggtcgc ttcccgtctc
    16981 gggatttcct ggcgttatga tggttcacat atcacgttct attatcttga tacccggacc
    17041 ttcccggtga cctatatgga cagccaggtt gcctataatg ccaccgtggt cagcggtacc
    17101 atgtcatcaa atggctcatc aggtggaaca gcatcggatg ccatttccgg tgatgccagt
    17161 aatacccaga ccaccaccgt ggatatgaaa tctgcgctgt atcaggatgt gaaaaatgct
    17221 gtctcatcaa tgctgacgcc gggtattggt cgcatgttca tgtcgacggg ctttatcacc
    17281 gtcacggaca ccccacaggt actggaaacg gtccggacgt tcattgaaaa acgcaatgaa
    17341 gaaatgaagc gccaggtggt gctgaatgtg gaaattctga gtatccggaa aacccgtaat
    17401 gagcaggcag gtatcgactg gaacgcagtc ttcagcgaca gaacgctggg actgagcctc
    17461 ggcagcacat tcaccagtgc agccagcgat accgtcactg gtggtgtttc cattgtgaac
    17521 gggaaactca ccggttcaaa agccttcctg aaagcactct cttcccaggg agatgtcagt
    17581 gtggtaaccc ggaattccgc cgtgaccaaa aacctgaccc cggtaccgat gcagattgcc
    17641 aatcagcaga gctacattga gagtgtgacg acggatacca ccgccaatgt cggctcatcc
    17701 acctccctga atgcggccac catcaccacc ggttttaata tgacccttct gccgttcatt
    17761 ctcccggact cacagacact gcagctgctc tattccatga gtctctccga caaaccggtt
    17821 attgagaatt acgagagtgg tggaagcaaa gcccagctgc cgaatgtgga tctgaaaacc
    17881 atcaaccaga cagtggacct gaaatccggg cagacagtca ttatcagtgg cttccagcag
    17941 tcagggcgtc gcagtggaaa acagggtgtc ggcacaccgg gattcttcgg tcttggcggt
    18001 gggatcaaca gtgaaaacga cgacaccatt ctcgtggtgc tgatcacgcc caatatcatc
    18061 tgatttgcag aaggaggact atcgtgacgg atatttcacc gacagagcga caggtgtttc
    18121 cgctgacggc aggacggaat gtatttcttg ccggaatgga ctggaaaaca ctgcccgcaa
    18181 gccataaaaa cccccggacg tttgcccgca gtctgggggc agtacgctat atttcctgtg
    18241 agtatctcag tacggaagat accgatcgtc acatcatggt tgcagccgtc agccagaata
    18301 cactccccaa aggcagccgc aggtatttct ctctcgccat gcttatcctg cccctgctcg
    18361 agccaggagg atacgctatc gttgaactgt cacaggcaaa cgatacagaa ctttatggtt
    18421 ttgtttctgc tgttgacggc atcctggtca gtgacctggt gggaacccgg gaggaaatca
    18481 gggaggcccg ggaaatattc ctcaccatta acagcgcgcc tgaacacggc tggacatgtt
    18541 atgaaccgcc ctcgtttaac gggcctgacg gcagaggtcc cctgccactg gaaaccctga
    18601 caggtgcagg gaaatatccg gcagaagcac gccttcaccc cgtatcccgt gggccacagc
    18661 ttattccggt attactcata ctcacccttc tgggtactgc atggtatggc tggcagtact
    18721 atgaacgcct gaaggcagaa aaagcagcac ttgctgaagc ggcacaaaaa gccgcagagg
    18781 aacggatcac accaccgtgg ctgagtatgc cggaaaccgg agattttatc cggggatgca
    18841 gtgacgtatg gtcacgcctg ccggtgtcgg tcgccggctg gcgatattca ctcgccgagt
    18901 gtgctgccac cgggaacagc ggcaatctgc gtgcatcata tacaaacatc gccgggacga
    18961 cagtgaccgc attcagccag cgggtcaggg aaattttcag catccggccg tttatggtta
    19021 tgccggacgg gaatagcggt ggttttgccc tgccggtcac cttcagtatg cctgaaactc
    19081 ccgttgccgt tgaggcatta ccggaaaaca ccctcctgca ggaacggctg accacactcg
    19141 cccggtcgat gcagctgaaa atggactggc aggaagtcag caacagcttc accgatgaag
    19201 acggaaatac catccagccc ccctggaagg agtatgacct gcagatactg acgacacttc
    19261 cggcgcacca ggtggcagag catttcagtg aaccctccgt ccgttttatc tccgtaacaa
    19321 ggcaactgga agagggtcgt ttccgttatc aattcacagg taaatattat gtccagtaaa
    19381 acaaaagctc ttctgctttc cgtcctgatc ctgccgacaa cggtcgcggc cagcaccatc
    19441 agcaacatgc aacagaataa ccggcaactc caggtggaac agattcagga agaaactgca
    19501 ctgtatgaag ccatgctggc aagagaaaag gtgcgacatg aactcagaac cctggagcag
    19561 ggagaaccag ctgagcctgt gcattcacag gaaagcagtt cagccgtcac gacagatacc
    19621 cctgccccca ttaccggtat tccccggctg acagagatat ccggagttca gccccagata
    19681 accgccagga tacaactgcc gggcggacaa actgctgatg taaaagaagg gcaacacatt
    19741 cccggcacca cattccgcgt ggaaaagatc accactgaca gtgttgtcct tgaacaaaat
    19801 ggtatcagaa caacactaca accctgactc agtgccgcca tttacagccg gctgtcggaa
    19861 cagattattc ccccggccct taatcacaaa aaaaatcgtt tccgggtacc gctgcccgta
    19921 aggagatttt atgctggcac ctgcagacca gccacctgat gacattctgg aatacgtggt
    19981 tgttgataca gataaaacag gacaaattca tgtcagagtg gtggaaggaa aaaaacacct
    20041 tcgtgccgtc caggattatc tgacccgcct gtgctcccgc tatccgggta aagtatcccc
    20101 gtttgagttc accacacttg atgtgatcgc ccgactcagg caggagacgg tcatttccgg
    20161 ggtggaaaac ggaattaacc ccgtacagca aaaaatgctc gggtatatca gccatgcggc
    20221 caccctcagc gcctcagatc ttcacatcac gccggggcgt gacagtacgg atttcacgta
    20281 tctggaggcc cgtgtccacg gagagctgga gctgctcgat atcgtcagaa aagatgaggg
    20341 gctggaatta ctgggggcca cctattccgg aatgactgac gtcattaagg gaacacagtt
    20401 tgatcccggt gtcccccagg atgcccgtct ggctgaaaga ttcctgaaac tggccggact
    20461 gtttggtgcg cgctactccc actatccgtg tgtgggcgga ctctatgccg tactgcgtct
    20521 gatcaaggat gacagtcagc atataccgac attcagtatg ctggggtatc accctgagca
    20581 ggagcgcgct gtccgaagga tgctgcagcg accggagggc atcgtgatcc tctctggccc
    20641 caccggttcc ggaaaatcca ccacgctgag gacggcttct gccgcctatc tggaacagta
    20701 tggcttcaac gataccggag ggatcctgct cccccggcga cgtctgttca caatagaatc
    20761 accaccagag gggcgtatcc ccggtgcaat tcagacggcc gttatggata ccgctcaggg
    20821 ctgggtcgat tctgttaagt ccgccctgcg ccttgatcct gacgctatcc tgaacgggga
    20881 gatacgtgac catgcctccg ccatcacggc gataaaagcc gccatgaccg gtcacctgat
    20941 gctgaccacc cttcatgcta acgacccgat aaatattctt gagcgtctgg aaatggaggg
    21001 cgttcaggca aggatgattg cagatccgca gttatttatc ggcctgctca gccagcgtct
    21061 ggttcaggtg atatgtcccc actgccgcct cccctggcat gaggtggaga gctcccggac
    21121 ggatgaagaa cgacgcctgg tggaaaactt ctgccagccc gatgccgtgt atcttcgtaa
    21181 ccataacggc tgcccacact gctggcgtgg agtgaacggc cggaccgtca ttgcagaagt
    21241 gatttccccg gatgcgaagt ttttccagat ttaccgggaa aaaggccgga ttgaggcaaa
    21301 aacctactgg caccgggagc tcggcggtat gacacgaaat cagcacctgc tgggcaaaat
    21361 caacagtggt caggtcgatc cgctggctgc gcattacata tcccctgtag acgaggacag
    21421 ctatacgctg ctgcactgat atgaaaattc tggaaagact caacaatacg gaactggaac
    21481 tgtccggcct taaccgctgg ctgggcaaaa agacgttcag gcggactacg ttttacgagt
    21541 cccttgcagg catgatccgg gacggcacac cggttatgcg ggcactggag ttcatctgcg
    21601 atgtggaaac ggattttggt aaaaagaaag ggcagtccgg cctgtatttt ctggcgacag
    21661 actgtatcgc cagcatacgc agcagtggtc agctctctcc ggccctgaag gactgggtac
    21721 ccaaagatga aattgccctg atccgtaacg gtgaagaacg aggtgatatc gctgaagcca
    21781 tgtttcaggt cgtcaaaacg gcaaaaggac gacaggagat gattagcagt ctggtgagtg
    21841 tctgcctcta tccgctcatc ctgctgacac tctgtgtggt gaatatgtat aacgttcata
    21901 cccgggttat tccgatgatc agcgcctttg caccggaaga acgctggtca gtacagatgg
    21961 tcattctggc caaatcctcc ggactggtta tcggttatgg tttgtggctg ctggcaggac
    22021 tgctgctgct ggcaattctc atcaggatgt cattcagtct gtataccggt ccccgacgac
    22081 ggtatcttga tcgcatcccg ccatggtccc tgtatcagac tttccatggc gtgaattacc
    22141 tttttaatat ttcatccatg ctgcagataa atattccttt atctcatgcc cttaccagaa
    22201 tagaaaaaca tgcagaacat aaccgatggt taaaatcacg aataagtgct atcagaaaaa
    22261 atgtcttatc cggtcagtca ctggcactgg ccatgaaaaa ctgtggttat gactttccgt
    22321 caaaatcctg tgtgaataat cttcttttaa attcagaaag ggaggacagt gttgccagta
    22381 tggcgcttta tgcagaccgc tggctggaag aagcaaaaaa gaatgtcaga aaaagcggca
    22441 ttattattac tgctatatca ggtctgctgg tatttctctt catcatcaat atggtcagtg
    22501 ccatttacgg catcagtgac atgctgaagc agtaaacaca gcatccttta tattcccctc
    22561 gatccaaatt ctgttttacc aatctcagga gctaatatga gcgtcataac ctcttcgtat
    22621 tcagaacata atattcgtca ccttcagaac gatgataaag gcatgaccct gctggaagtt
    22681 ctcggtgttc tggtcgtcgc tgccattgtt attggtgccg tgatgggact gatgtccgat
    22741 accctgtcct cttcagacaa ccagaaggaa ctcaaaaacc tgcagacaat cgccaccaaa
    22801 atga
//
LOCUS       DAJVUK010000056        22777 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.056, whole genome shotgun sequence.
ACCESSION   DAJVUK010000056 DAJVUK010000000
VERSION     DAJVUK010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22777
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.056"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..454)
                     /locus_tag="OQQ57_001997"
     CDS             complement(<1..454)
                     /locus_tag="OQQ57_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1956775.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPL
                     TVTWGGEEIKADAATTFTATKIFASDALTNGSLAKNLMFAQTTKGVLET"
     gene            complement(484..1200)
                     /locus_tag="OQQ57_001998"
                     /pseudo
     CDS             complement(484..1200)
                     /locus_tag="OQQ57_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            1496..2272
                     /gene="exuR"
                     /locus_tag="OQQ57_001999"
     CDS             1496..2272
                     /gene="exuR"
                     /locus_tag="OQQ57_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HCS1956776.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            2617..3279
                     /locus_tag="OQQ57_002000"
     CDS             2617..3279
                     /locus_tag="OQQ57_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1956777.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            3283..3666
                     /gene="mzrA"
                     /locus_tag="OQQ57_002001"
     CDS             3283..3666
                     /gene="mzrA"
                     /locus_tag="OQQ57_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HCS1956778.1"
                     /translation="MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            3813..4181
                     /locus_tag="OQQ57_002002"
     CDS             3813..4181
                     /locus_tag="OQQ57_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HCS1956779.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            4219..4524
                     /locus_tag="OQQ57_002003"
     CDS             4219..4524
                     /locus_tag="OQQ57_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HCS1956780.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            4527..4931
                     /locus_tag="OQQ57_002004"
     CDS             4527..4931
                     /locus_tag="OQQ57_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCS1956781.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            4921..5220
                     /locus_tag="OQQ57_002005"
     CDS             4921..5220
                     /locus_tag="OQQ57_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqjK-like family protein"
                     /protein_id="HCS1956782.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            5406..5798
                     /locus_tag="OQQ57_002006"
     CDS             5406..5798
                     /locus_tag="OQQ57_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008503138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCS1956783.1"
                     /translation="MKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVP
                     GFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSKFAEGVNSLMFMKN
                     LTISGGFLLLAITGPGAYSIDRLLNKKW"
     gene            5868..6771
                     /locus_tag="OQQ57_002007"
                     /pseudo
     CDS             5868..6771
                     /locus_tag="OQQ57_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708909.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
     gene            7064..7429
                     /locus_tag="OQQ57_002008"
     CDS             7064..7429
                     /locus_tag="OQQ57_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCS1956784.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPGENRFGPDPKLEP"
     gene            7671..8027
                     /locus_tag="OQQ57_002009"
     CDS             7671..8027
                     /locus_tag="OQQ57_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCS1956785.1"
                     /translation="MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLIL
                     GLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGVWALLYLVPIIGWLVLFVFACLEG
                     NSGSNRYGNDPKFGSN"
     gene            complement(8078..8974)
                     /gene="yhaJ"
                     /locus_tag="OQQ57_002010"
     CDS             complement(8078..8974)
                     /gene="yhaJ"
                     /locus_tag="OQQ57_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YhaJ"
                     /protein_id="HCS1956786.1"
                     /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
                     LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV
                     TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS
                     EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
                     KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWR
                     RDSMGEAKSWCLREIPKLFSGK"
     gene            9079..9780
                     /locus_tag="OQQ57_002011"
     CDS             9079..9780
                     /locus_tag="OQQ57_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HCS1956787.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            9803..9967
                     /locus_tag="OQQ57_002012"
     CDS             9803..9967
                     /locus_tag="OQQ57_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312016.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956788.1"
                     /translation="MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(10101..11411)
                     /locus_tag="OQQ57_002013"
     CDS             complement(10101..11411)
                     /locus_tag="OQQ57_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HCS1956789.1"
                     /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
                     EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
                     AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNS
                     VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
                     LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
                     GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
                     AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
     gene            complement(11439..12771)
                     /locus_tag="OQQ57_002014"
                     /pseudo
     CDS             complement(11439..12771)
                     /locus_tag="OQQ57_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026203.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
     gene            complement(13045..14409)
                     /gene="tdcG"
                     /locus_tag="OQQ57_002015"
     CDS             complement(13045..14409)
                     /gene="tdcG"
                     /locus_tag="OQQ57_002015"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HCS1956790.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
                     IVVDLYGALSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
                     HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
                     HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
                     GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
                     AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
                     IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
                     VVCG"
     gene            complement(14481..14870)
                     /locus_tag="OQQ57_002016"
     CDS             complement(14481..14870)
                     /locus_tag="OQQ57_002016"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="HCS1956791.1"
                     /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
                     DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
                     PTRSCVQVARLPKDVKLEIEAIAVRSA"
     gene            complement(14884..17178)
                     /gene="tdcE"
                     /locus_tag="OQQ57_002017"
     CDS             complement(14884..17178)
                     /gene="tdcE"
                     /locus_tag="OQQ57_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-ketobutyrate formate-lyase/pyruvate
                     formate-lyase"
                     /protein_id="HCS1956792.1"
                     /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD
                     ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
                     GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
                     MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
                     EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFEAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
                     EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
                     PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
                     DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNIMNREMLLDAIEHPEKYPNLTIRVSGY
                     AVRFNALTREQQQDVISRTFTQAL"
     gene            complement(17212..18420)
                     /gene="tdcD"
                     /locus_tag="OQQ57_002018"
     CDS             complement(17212..18420)
                     /gene="tdcD"
                     /locus_tag="OQQ57_002018"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HCS1956793.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
                     RRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL
                     GKVNAPAEFA"
     gene            complement(18446..19777)
                     /gene="tdcC"
                     /locus_tag="OQQ57_002019"
     CDS             complement(18446..19777)
                     /gene="tdcC"
                     /locus_tag="OQQ57_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HCS1956794.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            complement(19799..20788)
                     /gene="tdcB"
                     /locus_tag="OQQ57_002020"
     CDS             complement(19799..20788)
                     /gene="tdcB"
                     /locus_tag="OQQ57_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HCS1956795.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            complement(20887..21825)
                     /gene="tdcA"
                     /locus_tag="OQQ57_002021"
     CDS             complement(20887..21825)
                     /gene="tdcA"
                     /locus_tag="OQQ57_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HCS1956796.1"
                     /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRLLIEVG"
     gene            22014..22358
                     /gene="tdcR"
                     /locus_tag="OQQ57_002022"
     CDS             22014..22358
                     /gene="tdcR"
                     /locus_tag="OQQ57_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HCS1956797.1"
                     /translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
                     KFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
                     DRTSFCECNRFP"
BASE COUNT         5970 a         5763 c         5310 g         5734 t
ORIGIN      
        1 ctgtctccag aacacctttg gtggtttgag caaacatcag gtttttagcc agagaaccgt
       61 tagttaacgc atcggaagca aagattttgg ttgcggtaaa agtggttgcc gcatcagctt
      121 taatttcttc accgccccag gttactgtca gcggaacaat cttgctagca tccaggcttt
      181 gaaccagttg cgccggggaa actaactgca tttttacatc tttggtaacg tcgttagacc
      241 agattttggt catcaactgg taagattgca gaccctgccc cggcagatat tgcatttcta
      301 ctgctttcgg caacgcggtg ttatcggtct gtgtcatatc cagagcggca tcaacgttgg
      361 ccgttacagt aatatccttt tgtactgcca atgcggagcc tgcaacagaa aacatcgctg
      421 cgaccagaag agattttgca aatacctttt tcattactat tccttcgttt attacaatga
      481 taattaatgg accgccagtt caaactcgcc attatctttg gtgatccagt tattatattt
      541 gacaacgatt ttgtcgtagc cagatatgct ttcaagattt ctttcctgac cagggaagat
      601 gtttttattt acggtctgta tcttacaatt ttctttgcta ttatttttac aataagcgat
      661 cgttaaaatc tttaagcgtt gattccctgc attaactaat ttttgggcag catttacttc
      721 taacttagca ataggttgct gaggtggaac actaacaaca atcccccaaa ttaagctaac
      781 agttaactgc atagagaaat cttttttatc tgtggcaacg tcatcaatac tgggaaccgc
      841 ttcaaattta acgcgttaat ttttttcttt ttgctctggt tccattgcaa caaagcgcac
      901 agttttgcta ctaccggctg gtaaagcgaa tttaggtggc ataacaacca gatgatttgc
      961 atcaccggat ttaatctcaa cttcattttc ctgaggcgtc gatggattat cgatacggaa
     1021 tactgtcgcc ttgatgtact gaacttcatt acttttagat attacgcgaa cgttgccttc
     1081 atcctgacta ttaatggaaa cagccatagg ataaacagtc atatttgact gtgccaaaaa
     1141 aggagcgaac acgaataaaa gcggcgcaag ccgtgataag agattaattt tcgccaccat
     1201 ataaatttga tcttacaata ttgtttccaa aaagttggtg tattagagat gtagatttat
     1261 tgtaagtcaa tataaaaaag catttttagt taatattaaa tttaaaggct gggaattaac
     1321 ttgctgaaat ttagtagctt tcacaatgac gatacttatt ttttaggaat ttataaatat
     1381 tcacaatatt aattcaatac attaattcaa tcaccaaatt tatatatgac caatggcata
     1441 cccatgaata aagtggtatg ataacttcgt ccgcattcca ctccgggaga cgcatatgga
     1501 aatcactgaa ccacgccgtt tgtatcaaca acttgccgct gacctgaaag agcgcattga
     1561 acagggcgtc tatctggtgg gtgataaact gcctgccgaa cgctttattg ccgatgaaaa
     1621 gaacgtcagc cgaacggtag ttcgtgaagc catcatcatg ctggaagttg aaggctatgt
     1681 ggaggtgcgt aaaggttcag gtattcatgt ggtttccaac cagccgcgcc atcagcaggc
     1741 ggctgacaat aatatggaat tcgccaatta cggtccgttt gagttgcttc aggctcgcca
     1801 gctcatcgaa agtaatattg ccgagttcgc ggcaactcag gtaacgaaac aagacatcat
     1861 gaaactgatg gccattcagg aacaggcgcg cggcgaacaa tgcttccgtg attccgagtg
     1921 ggatttacag ttccacattc aggtagccct ggcgacgcag aactccgccc tggcggccat
     1981 cgttgaaaaa atgtggaccc agcgtagcca taacccgtac tggaaaaaac tacacgaaca
     2041 cattgattcc cgtaccgttg ataactggtg tgatgaccac gatcaaattc tcaaggcgtt
     2101 aattcgcaaa gatccccatg ctgctaagct ggcaatgtgg cagcatctgg aaaacaccaa
     2161 aatcatgtta tttaacgaaa ccagcgacga tttcgagttc aatgccgacc gctatctatt
     2221 cgccgaaaac ccggtagtgc atctcgatac ggccaccagt ggcagtaaat gaaactcctg
     2281 tccgacaggc gctgcgacgc gcctgttcgc ttcgtcggta agcgaaaagt ataaagtgtc
     2341 agcctgtgta aatcctctcg ccaccctccc ctgcattcag caaaatcaga ctccacggac
     2401 atgtaatttt gataacgaac aacgttgacc tttgttacaa ttagattcaa tttgaattta
     2461 tgtttttgaa tgctttctta tctcacgatt taacagggaa tagttcaggc tgtgttgatg
     2521 tatcaaaccc gcagaacata ccaaaacagc aataacattg cggtagtgca tcttttaaaa
     2581 ccagcgtggc gttaaccgat tcaccaggaa taatgaatgg aacttttgac ccaattgctg
     2641 caagccctgt gggcgcagga ttttgaaacc ctggccaatc catcgatgat tggcatgttg
     2701 tattttgtct tgtttgtaat tttgttcctt gaaaacggct tgcttccagc ggccttttta
     2761 ccgggcgaca gtttactggt attggtcggc gtgttgattg cgaaaggcgc gatgggttac
     2821 ccgcaaacga ttctgctgct gaccgttgcc gccagcctcg gctgctgggt cagctatatt
     2881 caggggcgat ggctgggcaa tacccgcacc gtacaaaact ggctatctca tttacccgcg
     2941 cattatcatc aacgcgcaca ccatcttttt cataaacacg gtttatcggc gctgttaatt
     3001 ggtcgcttta ttgcgtttgt cagaacactg ctgccgacga ttgccgggtt atcagggctg
     3061 aataacgcgc gctttcagtt tttcaactgg atgagcggtc tgctgtgggt attgatcctg
     3121 acaactctgg gttacatgct cggcaaaacg ccggtatttt taaagtacga ggaccagctg
     3181 atgtcatgcc tgatgctgct cccggtggtg ctgctggtgt ttggcctggc aggttctctg
     3241 gtcgtgttat ggaaaaagaa atatggaaat cgggggtaag ggatgcaaat acctcgcatg
     3301 tcgcttcgcc agctagcctg gtccggcact gttttacttc tggtcggcac gctgttgctg
     3361 gcctggtccg cggttcgcca gcaagagtct acgctggcga ttcgtgccgt tcatcaaggc
     3421 acaacgatgc cagacggttt ttcgatctgg catcaccttg acgctcatgg cattcctttc
     3481 aaaagtatca cccccaaaaa cgacactctg ttaattacat ttgactccag cgaccagagc
     3541 gccgccgcaa aagcggtcct cgacagaaca ttgccccatg gctacatcat tgcgcagcag
     3601 gacaataaca gtcaggctat gcagtggctg acccggttac gggataactc tcatcgcttc
     3661 ggataacttc ctgttatccg aaacatatca ctcactttgg tgatttcacc gtaactgtct
     3721 atgattaatg aggcggtggt taacactacc gcttcgttgt ctggacaatc gttcctttgt
     3781 aacaggtccg aatcacaatg gaaggttcaa gaatgaaata ccgcatcgct ttagctgttt
     3841 ctctctttgc tcttagtgcc ggtagttatg ccactaccct gtgtcaggaa aaggagcaaa
     3901 atatccttaa ggagatcagc tatgccgaaa aacaccaaaa ccagaatcgt attgacggtc
     3961 tgaataaagc cctgagtgaa gtccgggcca actgttcaga tagccagctg cgtgccgatc
     4021 atcacaagaa aatcgcaaag cagaaagatg aggtggcgga acgccagcaa gatttagccg
     4081 aggcgaagca aaaaggcgat gccgataaga ttgccaaacg cgaacggaaa ctggcagaag
     4141 cgcaggaaga gctgaaaaag ctggaagcgc gcgactacta actcacaata gtcactactt
     4201 actcacctgg agaaaactat gtcgaaagaa cacactacgg aacatctgcg tgctgagttg
     4261 aaatcccttt ccgatacgct ggaagaggtg cttagctcat ctggcgagaa gtcgaaagaa
     4321 gagttgagta agattcgtag caaagcggag caggcactga aacagagccg ttatcgcctg
     4381 ggtgaaaccg gtgatgccat cgccaaacaa acccgtgtcg cggcggcgcg tgctgatgag
     4441 tatgtgcgtg aaaatccgtg gaccggcgtg ggaattggcg ctgcaatcgg tgtagtgctc
     4501 ggcgttctgc tgtcgcgtcg ttaattatgg cggacactca tcacgcgcaa gggcccggta
     4561 aaagcgttct gggcatcggg cagcgaattg tttccatcat ggttgaaatg gtggaaacac
     4621 gtctgcggct ggcggtggtg gagctggaag aggaaaaagc taatctcttt caacttttac
     4681 tgatgctggg cctgacgatg cttttcgctg catttggtct tatgagcctg atggtgctaa
     4741 ttatttgggc ggttgatccg caatatcgcc tgaatgcgat gattgccacc accgtggtgt
     4801 tgctgctact ggcactgatt ggcggtatct ggacgttacg taaatcgcgt aaatccacct
     4861 tgctgcgcca tacacgccat gagctggcaa acgatcggca actgctcgag gaggagtccc
     4921 gtgagcagta aagtcgaacg tgaacgacgt aaggcgcaac tgcttagcca gatccagcaa
     4981 caacggctgg atctttccgc cagtcgtcgt gaatggctgg aggcaacagg cgcttacgat
     5041 cgtcgctgga atatgctgct aagtctgcgc tcctgggcgc tggttggcag tagcgtgatg
     5101 gcgatctgga cgattcgcca tcctaatatg ctggtccgct gggccagacg cggttttggc
     5161 gtatggagcg cctggcgtct ggttaaaacg accctcaagc agcaacagct tcgcggttaa
     5221 cttccctctg gccggagcca ttccggccct atccctcaaa ttttttgaag atttttgaca
     5281 gttttccttg ctaacaatca tcattcacca cgtttatgat tctctccatc gacagcaacg
     5341 acgctaatac cgcgcccttg cacaaaaaaa caatcagcag cctgagtggc gcagtggaga
     5401 gtatgatgaa aaaattagaa gatgttggtg tactggtagc gcgcatttta atgccgattc
     5461 tgtttattac cgcaggctgg ggaaaaatca ccgcttactc tggtacccaa caatatatgg
     5521 aagcaatggg tgtcccgggt tttatgctgc cgctggtgat tctgctcgag ttcggtggtg
     5581 gtctggcaat cctgttcggt ttcctgactc gcaccacagc cctgtttact gcgggcttta
     5641 cgctgctgac ggcattttta tttcacagca agtttgctga aggcgtcaac tcgctgatgt
     5701 tcatgaaaaa cctgacaatt tctggcggat tcctgctgct ggcaattacc ggtccgggcg
     5761 cgtatagcat cgaccgcctg ctgaataaaa agtggtaagc acgcgctata cttaacgata
     5821 aaaaacgagg aggaagctcc tcgtttttgc tattggagga gagaaaaatg gggcaactga
     5881 ttgacggcgt ctggcatgac acctggcccc actggcacag gcggttttat cgcagagaaa
     5941 gatcgttatc atctctatgt ttcactcgcc tgcccgtggg cgcaccgcac gctgatcatg
     6001 cgcaaactca aaggactgga accgtttatt tccgtttccg tagtgaaccc gctgatgctg
     6061 gaaaacggct ggacctttga tgacagtttt ccgggagcaa ccggagatac gctctatcaa
     6121 catgaatttc tgtatcagct ttatctccac gccgatccac actacagcgg acgagttact
     6181 gttcccgtgc tgtgggacaa aaagaaccac accattgtca gcaacgaatc agcagaaatc
     6241 atccgcatgt tcaataccgc gtttgatgcg ctgggcgcaa aagcgggtga ttactaccca
     6301 ccagccctgc aaacgaaaat tgacgaactt aacggctgga tttatgacac cgttaacaac
     6361 ggcgtgtata aagctggttt tgccaccagc cagcaagcct acgacgaggc ggtggcgaaa
     6421 gtgtttgaat cgctggcgcg actggagcag attttaggcc agcatcgtta cctgaccggc
     6481 aaccagctaa ccgaagccga tattcgcctg tggactacgc tggtgcgttt tgatccagtg
     6541 tatgtgaccc acttcaagtg tgataagcac cgcatcagcg attacctgaa tctgtatggc
     6601 ttcctgcgcg atatctacca gatgccgggg atcgccgaaa ctgtcaattt cgatcacatc
     6661 cgtaatcatt acttccgcag ccataagacc atcaacccta cggggattat ttcaattggt
     6721 ccgtggcagg atctcgatga accgcatgga cgagatgttc gcttcggtta aaaaaaggca
     6781 ccttacgagg tgcctctgat aattagctaa gtgcatgttg ttcatgtcgg atgcggcgtg
     6841 aacgccttat caaacctaca aaacgtttat attcaatatg ttaaaatgac cgcgtaggcc
     6901 agataagcgt agcgcatctg gcgattttgc gcttgtcatc agtcttagcg caccttcacg
     6961 gcactttatt aattccttga acgaatattt actgccattt cattcacgtc tattcttaat
     7021 ttgctgcttt aaaaacaagt gattgagcaa aattgaggca aaaatggact ggtatctgaa
     7081 agtactaaaa aattatgtcg gtttccgggg tcgtgcgcgg cgcaaagagt actggatgtt
     7141 tattctggtc aacatcatct ttacgttcgt gctggggctg ctggataaaa tgttaggctg
     7201 gcaacgcgcc ggtggcgaag gcatcctgac gacaatctac ggtattctgg tgtttttacc
     7261 gtggtgggcg gttcagttcc gccgcctgca cgacaccgac cgctcggcgt ggtgggcact
     7321 gttgttctta atcccgttta tcggctggct tattatcatc gtctttaact gccaggcggg
     7381 tacgccaggc gaaaaccgct ttggaccaga tccgaaactg gaaccttaaa acaaatctgc
     7441 tcgccggatg tctgactcat ccggctttta tcatcatgtt gatgaatgaa taatttacta
     7501 atgtttattt aaaatatttc aatgtcgtta tataaattac ctataaaaaa caaccatgta
     7561 tttatcttaa atatcaaaac ctttataaca tccgaaaaag aaagatacga atagcattta
     7621 cacaataccc ggaatagact ttcgtcactt ttaattaaag ggatgttttt atgcagtggt
     7681 atttagccgt attaaaaaat tatgttggtt tctctggtcg cgcacgtcgt aaagagtact
     7741 ggatgtttac tctgattaac gccatcgtcg gcgctattat caatgtcatt caattgattt
     7801 taggtttaga gtttccattc ctttctctca tttacctggc agcaacaatc attccggtca
     7861 ttgctctgtg tgttcgtcgt ctgcacgata ctgaccgttc aggtgtgtgg gcgcttctct
     7921 atctggtacc gatcattggc tggttagttc tgtttgtatt tgcctgttta gaaggcaatt
     7981 ctggcagcaa tcgttacgga aacgatccta agtttggttc aaattaatct tagaattggg
     8041 gcgatatttc gccccttttt attaacaata ataaatatta ttttccgcta aaaagtttgg
     8101 gaatttcccg cagacaccag gatttcgctt cccccatact gtcacgacgc caggccataa
     8161 taatatcgat ctcgctggtc gattccgggc tgacgacacg caaccgccct tccgcaatat
     8221 ctttttcgac catcggatac ggcatcgtcg ccacgccaag ccccgccagt aatgcctgac
     8281 gtttatcttc aatcgtgctc accgttaagc gcggctgttt gtccagcagc tgtacggtca
     8341 acaccgggcg ctcacgagcg gtatccgcta ccgcaattcc acgatatttc acgcgcgtca
     8401 cttcagataa cggttccggc tcctgatgaa tcgggtgatc aggcgcggca acgtagacgt
     8461 tcattaaggt atagagcttg cgcgagttga tctccgacga ggaacgaaaa tgcatatccg
     8521 gcgcgataac gatatccgcc cgcccctgct ccagtcgttc ccacgccccc gccagcactt
     8581 cggtgatgat tgccagttgg gtattggctt ttgccgccag tttgtcgatt aacgggaaaa
     8641 aggcaggtgt cggtaccagc gcctcggtca caatggtgag atgcgtttcc caaccgcgcg
     8701 cgagggcttc cgcatcggta gtcagtttat ctgctgcttc cagcaaaacg cgccctcgct
     8761 ccagcaacat cctcccgaca ttggtgaatt tggtgcgatg gcccgagcgg tcaaacagca
     8821 ccacatccag ctcttcttcc agtttttgca tggtgtagct aagtgcggaa ggcacgcgtc
     8881 ccagctcatc cgccgccgcc gcaaaactgc cccggcgatc gatcgcatcc ataacccgta
     8941 gtgcttccag cgttaatgcc ctttctttgg ccatttcgtt ctcattcagg aaatttgaac
     9001 ataccgggca gaatatctgg ctaacaatgt agcgtccagc cccttaccat aaaaggaagt
     9061 aaagagaggt caagaattat gattactacc cgaactgcca ggcagtgtgg acaagcagac
     9121 tacggatggt tgcaggcccg gtatactttt tcctttggac actacttcga cccgaaattg
     9181 ttaggctatg cctccctgcg tgtgcttaac caggaagtgc tggccccagg tgccgccttt
     9241 cagccgcgaa cctatcccaa agtcgatatt ttaaatgtga ttctggatgg agaagcagag
     9301 tatcgcgaca gcgaaggcaa tcatgttcag gccagcgccg gtgaggcgtt gctgctctct
     9361 acccagccgg gtgtcagcta cagcgaacac aatctcagca aagacaaacc gttaacacga
     9421 atgcagcttt ggctggacgc ctgcccgcag cgagagaatc cgctgattca aaaactggcg
     9481 cttaatatgg gcaagcagca attaatcgcc tcgccagagg gtacgatggg aagcctgcaa
     9541 ttacgccagc aagtgtggct gcaccatatc gtgctcgaca aaggcgaaag tgcgaatttc
     9601 cagttgcatg ggccacgcgc gtatttgcaa tcgattcacg ggaaatttca tgcgcttacg
     9661 catcatgaag agaaagcggc gctgacctgc ggtgatgggg cgtttattcg tgacgaggct
     9721 aacattacgc tggttgccga ttccccactg cgcgctttgc tgatagattt gcctgtctag
     9781 ttgtttttac agggagatga tgatgagtaa aaaatcggcc aaaaagcgcc agccagtgaa
     9841 gcccgtggtg gcgaaagaac ctgctcgcac cgccaaaaat tttggctatg aagagatgtt
     9901 gagcgagctg gaagccatcg tcgcggatgc tgaaacgcgt ttagccgagg atgaagctac
     9961 cgcgtaaaga caggttgccg gatgcggcga aaacgcctta tccggcctac aaaatccaac
    10021 aacattaacg aattaaacaa cccgtaggcc ggataaggtg cgccagcatc gcatccggca
    10081 caatactcaa aacctggcgt ttatctggcc ttgctcgcca taatctcgat aatctgccga
    10141 tccgtttgct gcatcgaatg gcttgctaac gcacacaggt tggcaatcga ctgctcaaca
    10201 tcatgcgcca cgatcccttc attgccggtc acggcggtat catccagcgc cattaacacc
    10261 gctttccacg cagccgaagc actggtcgaa accttcatcg cgcagctgtt cgacgcacca
    10321 tcgcaaatca tgccgctgac atcgccgatc atactgctga tcgccatcga gatagtttca
    10381 taacgcccat ccaccagcca tgccatcccg gcggcggccc ccattgctgc ggtcgttgcg
    10441 gcacaaagtg cagacaaacg cggtaactgg ttatggatgt aaattgcgct caaatgagaa
    10501 agcatcagcg cacgcgccag tcgttcatca tccgctccga agtgttctgc tacaaccacc
    10561 acaggcattg ttgcggtgat cccctggtta cccgagccgg agttactcat agccggaagc
    10621 gtagcgccgc ccatacgcgc atcggatgcc gcgctggtac gaatcacaat ggatgaagag
    10681 agatctttcg ccagcaaacc gcgctcgcac tgtttttcca gcgtcgcgcc aatatgcagc
    10741 ccccacttac cgctcaaacc ttcctgcgat aacgcacaat ttagcttcgc ggaatcgaga
    10801 ataaagcgga tcgccgcaaa cgggacttca ttgacgaact tcaggatctc agccagcgtc
    10861 gttctggaaa gcaccgtcag cggagactct tgctcgccct ctgccacaca cgcctgctgg
    10921 gtaaacacca cactattgtg cgtctcaata tgcacaatgt tggtatgccc gccgacgatg
    10981 gtgacacacg cccacttctc accgttccag actttggcgc gtgagaagag gatttcattg
    11041 caaggttcct ggatcttaac ggagactttc cccgccgcca gcagtgcttt ggcatcggca
    11101 attgcctgcg cagttgcgtc tttcagcact tccagcccgg cgttggcatt tccacctaac
    11161 gcccccagcg ccgccgcaat cggcagcccc accattcccg tgccgggaac ggtgacgccc
    11221 agaccgttct tcatcagatt tggcgaaacc caggcttcta cacgttcaac cggaccttcc
    11281 agttctgccg cagcaaccgc cgccgccagc gccagtgaaa tcggttcagt acatcccagc
    11341 gccggtttta cttcctcctg aacggcgagg atgtaacgct gccataacgg atttaaagtc
    11401 gaatcaaaca tattaaaaac cttaaaattt caggtaaatc aagaaaatgc caggaacgga
    11461 gaaacacaaa gcaacaaacc agtgacgata atcaggtaca gagacatccc tttgtatttg
    11521 tgcaatgccg gtactttgta aaccagccac gccgggatca ggcaccctac catgccgaaa
    11581 atcgggctac agatagaggt gaagctcaac accggtgcgt tcagtacgat ggcgctccag
    11641 gccagcaaaa tggcgaaaat catgatgccg cgctgaacaa gattttcgtt aatcttctcg
    11701 gcaggcatct tgcgacgcag gatgttcatt acgatccctt gcgttgcttc gcgaaagcct
    11761 aaatagacgc caaagaatgc agtcatgaca gcaaagatat tgagaatgac gctgaccact
    11821 ttcacccacg ctgcgccgtc accgctaata aactgtgcgg caatcgccag cgcggaaata
    11881 ttctgctcgt aggcttttac cgcttcgtca tgtcccatcg ccagcgtgaa cgacacggcg
    11941 tagaaaaaga cggtgacaaa taaaatgcca aacgcgatat tcattgcccg caatgcttta
    12001 tgccgcgcca cttcaattga tttttcccgc gagcgataag agatcaccat cgggcttaac
    12061 gtctggataa acagaatcga cgtcagggta aacggcagcg taataatggc gtttttcacc
    12121 agcagcccca gcggcggtag cgaaccgacg ttatacagat gccacattcc caccatcgac
    12181 acgcccagcg cagcgactac cagcagcttg gtcagcacca tgccggtcga aattttgaat
    12241 aacaatttct cgccgcgtga agagatcgcc accagaatgc aaatcagtac cagaccataa
    12301 aagggactgt ctgacagcac cccttccgtc acgccgaagg tatgcagata ggaagcacta
    12361 tcgttggtga tggcggtgga atagacgaac atccaaatca ccagcattac gaaatagagc
    12421 gcacctaaca ggatgcccca gtttttacct aaataaccgc taatgacact cgggtaatct
    12481 ttacattctg tgtgattctg ccagcgtatt aataaacaac cgctgaaaca gatacattgc
    12541 cgggtaacca atcaccgatg agagcaaaaa tacccacaat cccatcaaac cgacctgcac
    12601 cgggagaaaa acaatccccg cgccaatcgc catcccgata ctcataatca cccagccggt
    12661 gtcagtactg tcgaatttga tcgcttctcg ccactcgctc tcactcattc cagcacgacc
    12721 cgccggggtc gaagcgtctg caatgacgcc tttattcgat gcaatttcca taatttctcg
    12781 ctcaatattt tgtagggctt attatttttt tccgagccgc atcaaggcga tatgcggtct
    12841 acgtttttgc aggcgagtta ttagaataaa gaaatgatac gcgcgaggtc agagaaaatc
    12901 ttcacaatca agactttgaa ataacggaga tggataagaa ttttctacta aattaatcgc
    12961 aagagaatat tcattctcta tttgcggcag atcacaaaaa aaggtgcaca tttgtgcacc
    13021 caaggatgaa agctgacagc aatgtcagcc gcagaccact ttaatggcca gtcctccgcg
    13081 tgatgtttcg cggtatttat cgttcatatc tttgccggtt tcatacatcg tctcgatcac
    13141 tttatcgagt gaaacacgcg gtgccgaggt gcggcgcatc gccatccgcg cggcgtttac
    13201 tgctttcacg gcattaatgg cattacgttc aatgcacggg atttgtacct gtccggcaac
    13261 cggatcgcag gtcagcccaa ggttatgctc catcgcgatt tccgccgcat tgcatacctg
    13321 cgccggactg ccgcccagta gttcagttaa ccctgccgcc gccattgaac aggccacgcc
    13381 aatctccccc tgacagccga cctccgcgcc agagatggag gcgttcattt tatacagcgc
    13441 gccaatagcc cccgctgcca gaaaatagcg ggcaattgac cgctcgttta ccggacgacg
    13501 gaacttatcg taataagcca gcactgccgg aataatgccg cacgcaccgt tagtcggtgc
    13561 cgttaccacg cgcccgccag ctgcgttttc ttcactaacc gccagcgcgt acatgttgat
    13621 ccagtcgatg acattcatcg gatcgttaga gatgttatcg ctagaaacca gctgacgacg
    13681 cagcgctacg gcacgacgcg gcacattgag cggaccaggc agcacgcctt cagtgttcat
    13741 cccgcgttca ataccgtcat gcatcacttg ccagatacgg gcaaaccctg cgtcaatttc
    13801 cgctttgctg cgcagcgcca gctcgttgtg catcatcagg ccagatatag acaggccgtt
    13861 gtaatcacac attttcagca gttcacctgc tgagtggaaa tcgtaaggta cggacgtttc
    13921 gacatcgtgc gacaggccga agtgttcttc ttcgacaata aacccgccgc cgacagagta
    13981 ataggtttta cttaatagcg cttcctgtcc cttccaggca gtgatccgca ttccgttctc
    14041 atggcgaggc aacatttcgg gatggaagat aatgttcttt gctacaggaa aatcaacaat
    14101 atgcgcacca gatgccactg gcagccgccc gctgcgcgtt actaactcta taaatgcagg
    14161 gatctcatca atgacaacat cctgcggact gtttcctgcc agtcccatga taatggcgac
    14221 atccgtggca tggcctttgc ccgtcagtga caacgcccca tacagatcga ccacaatatg
    14281 gctcgtcgcg gttaataagc cgctactttc cagccgatca ataaaacttt ttccggcatt
    14341 cattggcccc acggtatgcg aactggaggg accaatccca attttgaaaa tatcgaatgc
    14401 actaatcata tccacaccct cggattgccg ttcagtgaag tggagcggaa cgaccttgcg
    14461 accgtcccgc tcacgaggct ttacgcacta cgtactgcga tagcttcaat ttccagcttc
    14521 acatctttcg gcaaacgcgc aacctgcaca cagctccggg tcgggtaggt cgcctgatgc
    14581 tcatcgaaga actgcttata gacttcattg atggtggcaa aatcattcag atcggtgatg
    14641 aacacggtca tcttgatgat atcgcccacg ctcagcccgg cagcaaccac gatcgctttg
    14701 acgttttcga ggcttaaacg cgcctgatct tgcacatcag ccgggatctc accggtctgc
    14761 gggcaaaccg gaatttgccc ggaggtgaag accatgctgc ctaaatcaac gccctgaaca
    14821 taagggccga ttgcgcctgg ggcacgttgc gtttcgataa tctttttcat acatcctccg
    14881 gcgtcagagc gcctgggtaa aagtacgtga aataacatcc tgttgctgtt cacgggtcag
    14941 tgcgttgaag cgcacggcgt agccagagac acggattgtc aggttaggat atttttccgg
    15001 gtgctcgatg gcatccagca gcatttcccg attcattatg ttgacgttga ggtgttgacc
    15061 gccttcgaca tccgcttcgt ggtggaaata cccatccagc aggccgacaa ggttggtttt
    15121 acgtactgga tcttctttgc ccagcgccgc aggaacgatt gagaaggtgt acgagatccc
    15181 atctttggcg taggtgaacg gcagtttcgc caccgacgtc aatgaggcca cggcaccttt
    15241 gcggtcacga ccatgcatcg ggttagcgcc cggcgcgaac ggtgttccgg cgcgacgacc
    15301 gtccggcgta ttaccggttt tctggccgta caccacgtta gaagtgatag tcagaatcga
    15361 ctgggtaggg acggcgttgc gataggttgg cagcgcttta attttcttca taaagcgttc
    15421 aaccaggtcg caggcaatgc tgtctacgcg ctcgtcgttg ttgccgtact gcggatattc
    15481 accgtcgatt tcaaagtcca ccgccaggcc gttttcgtca cggattggtt tcacgcgggc
    15541 atatttgatg gcagacaggg agtccgtcgc caccgacagg cccgcgatgc cgcatgccat
    15601 agtgcgatag acatcacgat cgtgcagcgc catcagcgaa gcttcgtagc tgtacttgtc
    15661 gtgcatgtag tgaatgatat tcagcgcgct gatgtactgc accgccagcc agtccatgaa
    15721 gtgatcgagg ctgtccatca ctttgtcgta atccagcacg tcgtccatca gcggtgctgt
    15781 tttcggcccg acctgaatct tcagcttctc gtccaccccg ccgttaattg cgtagagcag
    15841 cgttttcgcc aggttagcgc gtgcaccaaa gaactgcatt tgcttaccaa tcaccattgg
    15901 gctgacgcag caggcaatcg cgtaatcgtc gctgttgaag tcagtacgca tcagatcgtc
    15961 attttcatac tgcaaggaag aggtgacgat cgacacctgc gcggcatatt ttttgaaggc
    16021 aatcggtaat tcttccgacc aaagaatggt caggttaggt tccggtgccg gccccatagt
    16081 gtgcagggtg tgcaaatagc ggaaggagtt tttggtcacc agcgtacgac cgtccagccc
    16141 catcccgccg atcacttccg tcgcccagat tgggtcgccg gagaacagcg aatcaaattc
    16201 cggtgtacgc aggaagcgta ccatacggat cttcatgatg aagtgatcga tcagttcctg
    16261 tgcctgctgc tcattgagta cgccagcttc aaagtcgcgc tcaatgtaga tatcgaggaa
    16321 cgatgccgtg cggcccagcg acatcgcgcc gccattttgc gatttcactg ccgccagata
    16381 agcgaagtag agccactgca ccgcttcttg cgcattctgc gccgggcgag agatatcaaa
    16441 gccatatttc gccgccattt cctgaatctg caacagcgca tgacgatgct ctgccagctc
    16501 ctcacgcaga cggatggtgg cttccagatc ctcgcctttt tccagacgag actggagatc
    16561 ggcaaattgc agttcgcgtt cacgtaccag ataactgatg ccatacagcg ctacgcggcg
    16621 atagtcaccg ataatgcgcc cacggccata gccatctggt aaaccggtca gcacgccaga
    16681 tttacggcag cgcagcatat ccggtgagta aacatcaaat acgccctggt tatgggtttt
    16741 acgcagatcg gtaaacagat attcaaattc actgtccatt tcacggccat aggcgtggaa
    16801 tgaactttta atcatattaa tgccaccgaa cgggtgtagc gcacgtttca acggcgcatc
    16861 cgtttgcagg ccaacaattt tttccagcgg ctggttaata tatcccgcat catgagcggt
    16921 aattgtggtg gcaatattgg tatcgaaatc aaccggcgcg tgggttgcgt tttcgatacg
    16981 gataccttcc attacttttt cccacaattc cgtggtggca ggcgtcgctt cggcgaggaa
    17041 agattcatcg ccttcatacg gtgtatagtt atgttgaata aaatcgcgga cattaatttc
    17101 gtttttccag tccgtacctt taaagccaag ccatgcgtcg gcgtacagct tatcgctggt
    17161 atcaatatct accttcatga aaaataatct ctctacaata cttcaactaa attatgcaaa
    17221 ttctgcgggc gcgttaactt tgcctaaatg aatggcatcc aaagcaatca ttttttcttc
    17281 gttagtcgga ataacagcgc aaatgacacg cgcattttca ctggaaacaa ttcgctcacc
    17341 acaggagtta gagcgattat tcatttctgt atcaatctct acgcctaata cagccaaatg
    17401 ttccatgacc agacgacgaa ttaagcttga attctctcct attccgccgg tgaatataat
    17461 tccatccagg cgacgtaatg aagctgcgtg tccggcaata tgacgggcaa ttcggtgaac
    17521 aaaggtttta attgccagtt gcgcgcgttc gtgaccttca tgccaggctt tttccagaac
    17581 acgtaaatcc gaagaaagac cggaaatacc taataatccc gactctttat tcactacgcg
    17641 ttccaggtca cccaagctct ggttggtttg gctggcgacc caggacatcg caccaaaatc
    17701 gacatcgcca ctgcgggtac ccatcatcaa gccttccagc ggcgtcattc ccattgaggt
    17761 gtcaacactc tgaccgttgc gaactgcgca gattgacgcg ccattgccaa gatgcgccac
    17821 aaccaggccg gagtcatctt ccgctagatt cagcaaagaa tgtgcgcgct gggaaacata
    17881 gcggtgcgac gtgccgtgga aaccataacg gcgtacacct aactcttcat aatatttcca
    17941 cggcaggccg tataaataag cttccggagc catcgtctgg tggaaactgg tatcaaatac
    18001 cgccacctga gttacgcccg gaaataattg ctgcgccgat tcaataccac ttaaattggc
    18061 gtaattatgc aggggtgcca gtggagaaac gcgacggata ttatcaatga cctcatcggt
    18121 aataatggcg gactcggtaa aaatactgcc gccgtgagcg atgcggtggc caattaaggc
    18181 cacactgtca tttaaattcc gtttttccag ttcaaatgca attgccttca atgcaccttc
    18241 gtagctgtgg tgagccagcg gtgctggctc tcccccattt acggataaga atgcattttc
    18301 tgagttaata ccgtcggcaa tacctgacat taatacttca cagtcgctgg catcgagtac
    18361 ggaaaactta atcgaagacg aaccacagtt aataaccaaa acaaccggaa attcattcat
    18421 ctcttttctc atcctgagtt acggattaaa acagtttgta tacgatgttc aggatggtca
    18481 gcagaccaat cacggtaaca aacacgttat ccagacgacc acggtatttc gccagagacg
    18541 gtgctttacg gatggcatac atcggcaaca ggcacagcag ggatgcgata atcggtgcgc
    18601 ccatggcttc aataaggtcg aggatgttcg ggttggcgta ggcaacaacc caggtggagc
    18661 ccatgatgaa gatcatgctg atagtgttca gtttacccag cgacacttta gttttgtcgc
    18721 ctttataacc gaacttcaga atcagaccat tcaagccttc cagcgtcccc agatagtgac
    18781 cgaagaaaga tttgaagata gccacgagtg cgatgatgga agccgcatat tccagtgtaa
    18841 tcgcgaacgt tgttttggta ccggtcatgg acgcaaagtg gttagccaga taagaaagca
    18901 ctggaatatt ctgcgctttg gcttccgcca tgttggccgg agacagcgta aacaggcagc
    18961 taaaggcaaa gaacatcacc actgcaacca tcagcatgct ggcacgagaa atgatttggg
    19021 aacatttacg ttcggtgaag tcgcgaccga agtctttctc atactcttca cgtttagaaa
    19081 ccacgaagga agagacgatt ggcgagaagt taaaggagaa aaccatgatg gaaatcccca
    19141 gccagacagt gatcaggata ccgtcatgac cggttaacga cagcgaaccg aggtcaacct
    19201 ggtcgataac tgcagagttc cagtaaggga tcagcgacag agaaatcagc accaggctgg
    19261 cgataaacgg ccataccagg tagctcatca ctttaaccat cagatcctta ccaaaccaga
    19321 tgacgaaagc catcagcagc aacaggaaca gcgccacaaa gccgcgattc agcggtgcaa
    19381 atccgagctg gttttcccag aacgtcataa aggtattggt aatagtaacg ccataaatcc
    19441 acagcagtgg gcaaatcgcg aagaagtaca ggaacgtgat aaccacgccg ccagttttac
    19501 caaaatgctc ttccaccgtt tccgtaatgt tgccggaagg gttagagcca gaaagacaca
    19561 gacgcgccag cgcccggtgg caataaaatg cgatggggta tgccaatacc aacatcagaa
    19621 gaatcgggat cagtccgcca aaacctgcgc ggatagggaa gaacagcacc ccggcgccga
    19681 ttgccgtacc aaacaagcct aacgtccatg tggtatctga tttacgccag gacgattgtt
    19741 ttgtctggct ggatacaatg ctatctgaag tactcatatc ctatcctcaa cgaattaatt
    19801 aagcgtcaac gaaaccggtg atttgagaga cgcgagaaag atcgatattg ccgccggaaa
    19861 taatactgac ggtttttctg ttttgaatat attggtctaa tttaccgctt aataatgcag
    19921 cacatgccag agcacctgcg ccttcggtga cgactttatt gcgctgaatt aaggcaatca
    19981 tactgtttct gatttcgtct tcgctgacca gcacgatgtc atcgactaat tcacgaacga
    20041 tttcgtaagt taaattaccc gggcgggaga catcacaacc atccgccagg gtgccggtag
    20101 ttcggtgcgt ggttatttct ccggagtgga aagaagccgc catgccgtga acgttttctg
    20161 actgtacgcc aataacacga atggtcgggt taatagattt aattgccacc gcaataccag
    20221 caattaaacc accaccacca attggcacaa tcacgttatc gacatcatag agatcttcca
    20281 taatttccag accaatcgtt ccctggccag caatcacttt cggatcatcg taaggtggga
    20341 taaaaatacg accttccatt tcgacaattt cgctcacttt agcgatagtg tcgttgaagt
    20401 tatcaccatg cagaacgact tctgcggagt agtcgcacgt tgccgctact ttggattttg
    20461 gcgcaccttt tggcatcacc actttaccgt cgatacccag catcgcgcag gagagcgaaa
    20521 ccccttgcgc atggttgccc gcagaacagg ccaccacgcc tttgcgtttt tccgcatcgg
    20581 tcagtgaact taatttatta aatgcgccac gaattttaaa tgaacccgta cgctgcatat
    20641 tttcaaactt caggaatatt tcacctttgc aacgttcact aaaatagttg gagcgaggca
    20701 tgcctgtttt ataaattcgc ccagccagtc gttgtttcgc ttcaataata tcatcaatag
    20761 caaccggcag atcgtatgta atatgcatta taaaacctct tcgcctgaat taaatatgta
    20821 gataaccgta accgacacct gcaaaacaga caggtggatt atttatgttt aaataaaaac
    20881 aaataactaa ccaacttcta ttaatagcct tcgtctacac ccattataag atgaatactc
    20941 tttggctaat tccaccaaaa ccgatgctgc ttttttaata cgataatttt tcgaccatac
    21001 cgcggcatat tgtgccacag gtaatgtttc ttcaactgga atagtaataa attgatttga
    21061 accaaaaggt gacgtcatat cacaaggaat tacagttaag aaatcagcat tgagaacaag
    21121 attataaatt gtcacgactg agtcggtttt aacgatgttt tcaatactga tgccatttct
    21181 ttgtaacgta gtaagaagct cgctgtagta ccccatattg gtttgtggca acacccactg
    21241 ttcgttcttc aacgactcca gcgtggtggt gccggtgcat gttcgggact tactggctac
    21301 cagcacaaac tcggactcga acagcggctc aacatgtaaa tcctgaagct tcatttctgc
    21361 acttaacgta ccaatcgcaa aatccagtcg accgtcgcgg attgccggta agaacgaaga
    21421 cagttgcgct tcatacatag aaacctgcgc tttcgggaac acctctttga acttgttgat
    21481 catccctgac ataaaagtaa aaccaatcaa tgaaggaaaa ccaaatgaga cttccaccac
    21541 cgcctcagaa gacataccgc ttatctcatt aaccatattt ttcatttcac gggtaatgga
    21601 ttcggaacgg gagagtaaca attgaccggc aggtgttaat gttacaccgg tatttttccg
    21661 caccactaat tccacaccaa aataatcttc aatatcgtta atgattttac tgacggccgg
    21721 ttgagttaac cctaattctt ttgcagccga gccgatagag ccacttctaa tgacttcctg
    21781 aaagactacc aggtgctgcg ttttcggaag aagaatagtg ctcataacga cctacgttaa
    21841 ttacctcatt gacggcatga agtgtatcaa aatgaaatga acaggatatg tgcgaccact
    21901 cacaaattaa ctttcattac tttccagggt atcgttatta caattaaata tctttaaata
    21961 tcaacaagtt aaaacataaa aatcagcata aaccctgatt tttatcaaaa aaaatgacgg
    22021 ggataaccat attttatggc gataacatca ttcgttatgt ggttaataca aaaaaggggc
    22081 tgagaccata tttcaagcaa ttaccggata attaccaggc aaaatttgag ttaaatttaa
    22141 tgagcaagtt ctcaaatttt attataaata aaccattttc agcgataaat actgcggcac
    22201 gtcacatttt ttcacgctat ttgttggaga acaaacattt attttatcaa tattttaaaa
    22261 tttcgaatac aggtattgat catctcgaac aattgattaa cgtcaacttt ttctcttctg
    22321 acaggacgtc attttgtgaa tgcaatcgtt ttccataaat tcttctcccc tcataggcga
    22381 cgaatagcat tttgtgttga ggatcacaaa acaaataatt gctggtcgcc gcgataaggt
    22441 cagacgaagt caacaagggg aattttcact gtgctttaca tcagcgtagg acacagaatg
    22501 ttgcttcgtt tactgtaacg ccgggtaaat gagcgttttt tgatagtgcg taagtgtcgt
    22561 gcgaggaaaa taagcatcta ttattgtttg tcatgacgac aaggcaggca tcaatgaaag
    22621 gcttcccaat tgcacatatt tttcaccctt caatcccgcc aatgcacgca gtggttaaca
    22681 atcacaatag aaatattgat tattggacgg taaaaagaaa gtttgcagaa attgtctcca
    22741 ccaatgacgt taaaaaaatt tacagtataa gtaatga
//
LOCUS       DAJVUK010000057        22769 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.057, whole genome shotgun sequence.
ACCESSION   DAJVUK010000057 DAJVUK010000000
VERSION     DAJVUK010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22769
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.057"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            113..719
                     /locus_tag="OQQ57_002023"
                     /pseudo
     CDS             113..719
                     /locus_tag="OQQ57_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001544752.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            822..1325
                     /locus_tag="OQQ57_002024"
                     /pseudo
     CDS             822..1325
                     /locus_tag="OQQ57_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311186.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YfbM family protein"
     gene            complement(1392..2849)
                     /gene="nuoN"
                     /locus_tag="OQQ57_002025"
     CDS             complement(1392..2849)
                     /gene="nuoN"
                     /locus_tag="OQQ57_002025"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HCS1956798.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGMMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQSLISIVRLAMPLM"
     gene            complement(2856..4385)
                     /gene="nuoM"
                     /locus_tag="OQQ57_002026"
     CDS             complement(2856..4385)
                     /gene="nuoM"
                     /locus_tag="OQQ57_002026"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HCS1956799.1"
                     /translation="MLLPWLILIPFIGGFLCWQTEHFDVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(4549..6390)
                     /gene="nuoL"
                     /locus_tag="OQQ57_002027"
     CDS             complement(4549..6390)
                     /gene="nuoL"
                     /locus_tag="OQQ57_002027"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HCS1956800.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEILHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYFCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQSVLPQTTELAHGSMLTLEITSGVVAVVGILLA
                     AWLWQGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(6387..6689)
                     /gene="nuoK"
                     /locus_tag="OQQ57_002028"
     CDS             complement(6387..6689)
                     /gene="nuoK"
                     /locus_tag="OQQ57_002028"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HCS1956801.1"
                     /translation="MIPLQHGLILSAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(6686..7240)
                     /gene="nuoJ"
                     /locus_tag="OQQ57_002029"
     CDS             complement(6686..7240)
                     /gene="nuoJ"
                     /locus_tag="OQQ57_002029"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HCS1956802.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(7252..7794)
                     /gene="nuoI"
                     /locus_tag="OQQ57_002030"
     CDS             complement(7252..7794)
                     /gene="nuoI"
                     /locus_tag="OQQ57_002030"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HCS1956803.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(7809..8786)
                     /gene="nuoH"
                     /locus_tag="OQQ57_002031"
     CDS             complement(7809..8786)
                     /gene="nuoH"
                     /locus_tag="OQQ57_002031"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HCS1956804.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALIVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(8783..11509)
                     /gene="nuoG"
                     /locus_tag="OQQ57_002032"
     CDS             complement(8783..11509)
                     /gene="nuoG"
                     /locus_tag="OQQ57_002032"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HCS1956805.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE
                     VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(11562..12899)
                     /gene="nuoF"
                     /locus_tag="OQQ57_002033"
     CDS             complement(11562..12899)
                     /gene="nuoF"
                     /locus_tag="OQQ57_002033"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HCS1956806.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12896..13396)
                     /gene="nuoE"
                     /locus_tag="OQQ57_002034"
     CDS             complement(12896..13396)
                     /gene="nuoE"
                     /locus_tag="OQQ57_002034"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HCS1956807.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(13399..15201)
                     /gene="nuoC"
                     /locus_tag="OQQ57_002035"
     CDS             complement(13399..15201)
                     /gene="nuoC"
                     /locus_tag="OQQ57_002035"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HCS1956808.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(15295..15957)
                     /gene="nuoB"
                     /locus_tag="OQQ57_002036"
     CDS             complement(15295..15957)
                     /gene="nuoB"
                     /locus_tag="OQQ57_002036"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HCS1956809.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15973..16416)
                     /gene="nuoA"
                     /locus_tag="OQQ57_002037"
     CDS             complement(15973..16416)
                     /gene="nuoA"
                     /locus_tag="OQQ57_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HCS1956810.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(17047..17985)
                     /gene="lrhA"
                     /locus_tag="OQQ57_002038"
     CDS             complement(17047..17985)
                     /gene="lrhA"
                     /locus_tag="OQQ57_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HCS1956811.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
     gene            18904..20121
                     /gene="alaA"
                     /locus_tag="OQQ57_002039"
     CDS             18904..20121
                     /gene="alaA"
                     /locus_tag="OQQ57_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase AlaA"
                     /protein_id="HCS1956812.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            20205..20803
                     /gene="yfbR"
                     /locus_tag="OQQ57_002040"
                     /pseudo
     CDS             20205..20803
                     /gene="yfbR"
                     /locus_tag="OQQ57_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
     gene            complement(20862..22694)
                     /locus_tag="OQQ57_002041"
     CDS             complement(20862..22694)
                     /locus_tag="OQQ57_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HCS1956813.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPVGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
BASE COUNT         5844 a         6273 c         5696 g         4956 t
ORIGIN      
        1 ttgtatagat ctaacaaccg taataaaaca aatactcata actcattata aataatgata
       61 aaataacgtc ttttattgat aatttatata tgggaaaaat tccttttgtt atattgtttc
      121 tgatttcact ccctctgatt atttttacca accctgggtc actgcattac caccaacgcc
      181 ccgacacgtc agtcctgagc aattagaaaa aacagttcgt tatcttacac aaactgtgca
      241 tccacgtaat gccgacaata ttgataatct gaataggtcc gtagagtata taaaagagtt
      301 ctttgtcagt agcggtgcca gagttaccgc gcagggcgtc cccgattggc tattacgact
      361 ctgcgcctgg tagccaggat tacctttacc cgcaatgtcc tggctttatc ccgatcgggg
      421 ggactttatt gcctggtcgg cagaatacag gatatcaacg ccgttcgtca ggtaaaaacg
      481 gcattgttat catcccggga tttatctgtt tattctatga atgccccatg gtttattccc
      541 ggtattgatt tctctgacca cctgaattat tggcaacacg atattcccgc cgtaatgatt
      601 actgacaccg ctttttatcg taataaacaa taccacttgc ccggtgatac agcagacaga
      661 ttgaattatc agaaaatggc tcagatggtg ttataacctt gttacacaac agtaaataat
      721 aaaaatttct cgaggcgggt ccagaaacag cgacatgtac attttatttt ccctcgtctg
      781 ttttaagatg cgaaacataa aattcaatgg aggaaaaata aatgggaatg attggttatt
      841 ttgcagaaat tgactcagaa aagattaacc aatctgcttg agtctactga aaaacctttg
      901 atggataata tacatgacac gctttcagga ttacgccgac tggatattga taaacgctgg
      961 gattttttac acttttgggc tgacaggcac ccctgctttt gatcccgcga agaatgatcc
     1021 gctgagtcgt gccgtgcttg gtgaacacag cctcgaagat ggcatagatg gcttcctggg
     1081 attgacctgg aatcaggaat tagccgcgac aatcgaccga ctggaatcac tggatcgaag
     1141 taagctgcgt aaacagtttt ccattaagcg actatgaaat ggagatttat ccgggagtga
     1201 ccttttcaga agagttagag gggcaactct ttgcctcgat catgcttgat atggaaaagc
     1261 tgattagcgc gtatcgacgt atgctgcgac aagggaatca tgcgctgacg gttattgttg
     1321 ggtgatggtg tcagagcgcc aaaaaaaacc gccgaacatg tcggcggttt tctgacttac
     1381 aaactaacag attacatcag cggcattgct aaccgcacaa tactaatcag cgattgtggc
     1441 catacaccca gcaccagtac caacagtgca gaaatcagca ccacgatacc gcccgcgctg
     1501 tactgccagt ttgacggtgc atcgcgaccc ggttgttccg gtgcgtgcag gtacaggctc
     1561 accgccacgc gcaggtagta gtagaggccg attgccgaac cgacaaccac ggcacccacc
     1621 agccaccaca agtgtgcctg gacaccgacc gccagcacgt agaacttacc gataaagccc
     1681 agcgtcatcg ggataccggc cagagacagc atcatcaccg tcatcactgc cgcgaggatc
     1741 ggacgatgcc agaacagacc gcggtaagag aacagggaat cagcatccgg gccacgatac
     1801 gggctggaca tcaggctgac cacgccgaac gcgccgaggc tgctgaacag ataaccggcc
     1861 aggtaaaccc ctaccgcttc catcgacatc tcgccggttt gcagcgcaat cagcgccacc
     1921 agcagatagc cgaggtgaga gatagatgag taaccgagca gacgtttgat gttggtctgg
     1981 ctcaacgcca tcaggttacc gaagatgatg gaggcaaagg cgataatcgc cagtactacg
     2041 cgaatcgctt cgctgtcacc caccggtgca tagaggaaca gacgcatcac cacaccgaag
     2101 atagcgattt tgctcgccgt cgccaggaaa gtggaaaccg gcgcaggcgc gccctggtat
     2161 acgtctggcg tccacaggtg gaacggcacc agagagagtt tgaagccgag gccaacaatc
     2221 atcatgccga aacctgccag caacagcggc tcgttgagca taccgtcgcc gaggttttta
     2281 cccagcgcga caaacgacag gtcgccagac tgcgcataca ccagcgccat accaaacagc
     2341 aggaaagaag acgctgcggc agaaaggatg gtgtatttga tactggcttc cagcgaacgt
     2401 ttctggcgga aagcgtaacc gaccaggcca aacagcggca aagagatcag ttcaataccg
     2461 aggaacagag acgccagatg gtttgcattc gccagcagga tcccgcccag cgcggcaatt
     2521 aacaccaaca ggtagaactc atccttgttg tcgttatagc cttcaagcca cgggtaggcg
     2581 aaagtacagg tggcgaggct cgccaacaat accagcccgg tgtaaagcat ggcgaaacca
     2641 tcaacgcgca tcagcggcgt aacgtccata gcgcccgcct ggccaacaaa ccagagcgaa
     2701 accagcgccg cgttaagccc aataaccgag agcgtagcgt tgaggaaatg attgcgtcgc
     2761 cacgcaatgg agagcatcac aaccaccacc gttaagccga cgatcagcaa cggtagcagt
     2821 gcgatcaggt tttgtggagt tattgtcatg gcgatttacg gccttgtagt agtaacggaa
     2881 ttaacaaacc actgctggat attgccaatc gcggagtgcg aggtatccag aatcggctgc
     2941 ggatagaagc ccagcagtac cagcagcacc accagcaaca ggatcataaa cagctcacgc
     3001 agcgacatcc ctggcagttc ctggctggca atctggcttt tcgctttacc gaagtaagcg
     3061 cgatgcaaca tcgccagcga ataaacagat gcaaagacca gcccaaaggt agagataacg
     3121 gtaatcaccg ggacaacctg gaagctgccg aacagaatca taaattcgcc gacgaagtta
     3181 ccggtgccag gcatcccaag cgttgccacc gcaaagaaca gcgacaatgc tggcagccat
     3241 ttcatcttgc tccacagacc gcccatcatg cgcatgtcgc gggtatggat acgttcataa
     3301 agctgaccac aaagaataaa cagacccgcc gccgacaaac cgtgcgcaat catctggatt
     3361 accgcgccct ggtaggccaa ctggctgccg gtgtagatag caatcagcac gaagcccatg
     3421 tgggaaaccg aggtgtaggc gatcagacgt ttgatatcgg tctgggcgaa ggccatccac
     3481 gcaccgtaga agatgccgat aacacccagc cacatagcaa ttggcgcgaa ctctgccgac
     3541 gcgttcggga acagcggcag ggagaaacgc agcaaaccgt aagcggcagt tttcagcaag
     3601 atccccgcga gatcaacgga accggcggtc ggagcctggg agtgcgcatc cggcagccag
     3661 ccatgcagcg gaaccaccgg cattttgact gcgaaggcga tgaagaagcc cagcattaac
     3721 aggtattcca caccactgga cattggcgta ttcagcagct cttcatagtt gaaggtccag
     3781 acgccggtcg cattgtagtg aacaaaaacc agcgccagga tggcaatcaa catcaccagg
     3841 ccactcgcct gggtgtaaat gaagaacttg gttgccgccg tgatacgcgt tttaccgtca
     3901 gaggctttat gcccccacag tgcgatcagg aagtacatcg gcaccagcat catttcccag
     3961 aagaagaaga acaggaacat gtcgatggca aggaacacgc cgataacgcc gcccaggatc
     4021 cacatcaggt tgaggtggaa gaagccctga tatttttcga tctctttcca cgaacagagt
     4081 accgccagca caccgagcag accggtcagc acgaccatca gcagcgacag accgtcaatg
     4141 gcgagatgaa tagagatacc aaaacgtggg atccacggca tgtcgaattc agactgccac
     4201 tgcggaattc cggcggattg cgtcagtgaa taaccgccct gcaaccacag ttgcagcgac
     4261 agcgccagcg tcaatcccat ggtgatcagc gcgatccagc gtggcacctt gacgtcaaag
     4321 tgttcggtct gccagcacag gaagccgcca ataaagggaa ttaatattag ccagggtagt
     4381 aacatggcga tctttattcc ttgtaaaagt cccgtcagga ccggattttc aacgaattct
     4441 cacgacagaa aattctcttc ggactggggg tagtgtcgga tgcgccgcga aggcagctta
     4501 tccgacctac gttcttatat gcccaggggc aatcccacaa tccttaactc aacgcagtac
     4561 catcaacagt gccagcacca cgaccgcacc gatgctcatg gatgccacat accagcgcag
     4621 ataaccgttc tcgcttaaca gcaggccttt acctgcaaag cgggaaagaa ccgccggaat
     4681 gttcatcatt gagttcagcg gatcgcgttt cagcaaccag gcaataccca gaaacggctt
     4741 gacgaacact ttgtcgtaca gccagtcaaa gccccaggcg ttgtaccacc aggtgcccag
     4801 cagacggccc ggcgcactgt tggcaatgga ggtcaccaga gtacgtttac cctgccacag
     4861 ccaggctgcc agcagaatgc cgaccaccgc gaccacgcca gaggtaattt ccagggtcaa
     4921 catgctgccg tgcgccagtt ccgtcgtttg cggaagcacg ctctgcagcg gcggtacaat
     4981 cagtgcgcca acgaaggtgg aaaggatcag cagcacaatc agcggcaggc tgtgagttac
     5041 ccctttcacg gcgtgagcgt gaatttgttc ttttccgtgg aagacgatga aaatcatacg
     5101 gaaggtgtag agcgaggtca taaacgcacc gaccagacct gccaccatca gattgatatg
     5161 accattcgcc atcgcacccg cgaggatctc atccttactg aagaagcccg cagtgaccag
     5221 cggtagtgcc gacagtgctg cgccgcccac caggaagcag aaataaacca gcggaataga
     5281 tttacgcaga ccgcccatct tgaagatgtt ctgttcgtga tggcaggcca gaatgacgga
     5341 accggatgcc aggaacagca gcgctttaaa gaacgcgtga gtcatcaagt ggaaaatcgc
     5401 cgcatcccat gcctgcacgc caagcgcgag gaacatgtag ccaatctggc tcatggtaga
     5461 gtaagcgaga acacgtttga tgtcggtctg taccagcgcg gcaaaaccgg ccagcagcag
     5521 cgtaaccgcc ccgacaatgc ccaccagatg cagaatttcc ggcgtcatca ggaacaggcc
     5581 gtgggtacgg gcgatcaggt agacacccgc ggttaccatg gttgcggcgt ggatcagcgc
     5641 ggagacaggc gtcgggcccg ccatcgcgtc ggcaagccat gtctgcaacg gcaactgcgc
     5701 agatttaccg accgcaccgc ccagcagcat cagcgtcgcc cacatcagca tgttattgcc
     5761 gtcagcaaag tgcgctggtg ccagttccac catttcgcgg aagttcaggg tgcccagttc
     5821 gttgtaaaga atgaacagcg cgaaagcgag gaacacgtca cccacacggg tcacgacgaa
     5881 cgctttcatt gccgctgcgc cattcttcgg atcggtgtaa tagaacccga tcagcagata
     5941 ggagcacagg cccacgcctt cccagccgag gtacatcagc agcaggttat cggcgagaac
     6001 cagaactacc atgctggcga tgaacaggtt ggtgtaggcg aagaagcgag agtagccctc
     6061 ttcaccgcgc atgtaccagg aggcgtacat gtgaataagg aaacccacac cagtgaccac
     6121 cgagagcatg gtcagcgaca ggccgtccag caccaggtta aaaccgatgt taaagtcgcc
     6181 taccgacatc cacgtccaca gcggctggct gtatgcctgc tcgccgttag cgaagaaatc
     6241 aacgccgata aaggcggtta ccagcgccgc caggcccaca gagccaacgc cgacgatcgc
     6301 cgaaacgttt tcagaccagc gcccacggga gaacgccagc aggacgaagc caatcaatgg
     6361 caaaataatg gttaaggcaa gcatgttcat ccgcgcatct cacttactga atcgatgttc
     6421 aggttctggc gacgacggtg aagttgcagc agcagcgcaa ggccgatact cgcttctgcc
     6481 gccgcgaggc tgatggcgag aatgtacatc acctgaccgt cggtctgacc ccagtagctt
     6541 ccggcgacca caaaggccag cgcggaggcg ttaatcatga tttccagacc aatcagcata
     6601 aacagcagat tgcgacggat aaccagaccg gttaagccaa gaacgaataa gattgccgag
     6661 aggatcagtc catgttgtaa ggggatcatg cgtgctcctc cgtttttctt ttcgcgctgt
     6721 cgtctttacg attgctcagc acttcacccg cacgctcttc acgaccgacg tggaaggcca
     6781 caaccagacc cgcgagcagc agcatagaag ccagttccac cgccagtacg taaggcccga
     6841 acagcgtaat acccactgct ttagcactga ttggcgtacc gtcgataccc tgatcattaa
     6901 caccaaggat ggcgtaaaca atcaccacca gcatgatggc cgacaaaatt gccggaccaa
     6961 tccacacctg cggtttcagc cactggcgtt cctgttcgat ttctgaaccg cccaggttga
     7021 gcatcatcac cacgaacacg aacagcacca taatggcacc cgcgtagacg ataatttcca
     7081 gcgcaccggc gaagtaagcg cccagtgaga agaacacccc ggaaatcgcc agcagcgaaa
     7141 taatcaggta cagcagtgcg tgtaccggat tggtatgggt gatcactcgc aaggtcgcaa
     7201 gtatggctat caggccacag atataaaaag cgaactccat tgcccctctc cttacggtaa
     7261 caggctcttg acgtcgatag gcttggcttc gttctctgct tcgcccttat ctttgccgtc
     7321 gattgccata cctgccatcc ggtagaagtt atattccggg tatttgcccg gaccggagat
     7381 cagcagatcc tctttttcgt aaaccagatc ctggcgcttg tattccccca tttcgaaatc
     7441 cggggttaac tgaatcgccg tggtcggaca ggcttcttcg cacagaccac agaaaatgca
     7501 gcgtgagaag ttgatgcgga aaaattccgg gtaccagcga ccgtctttgg tttctgcttt
     7561 ttgcagcgag atacagccga ccgggcaggc taccgcgcag aggttacagg ctacgcaacg
     7621 ctcttcgccg tccgggtcgc gggtcagaac gatacgacca cgataacggg gcggcagata
     7681 gaccggctct tccgggtaca ttcgcgtttc gcgtttggcg aacgcgtgca ggccgatcat
     7741 ccagatacta cgaacctggg tgccgaaacc tactaacaat tcttttaagg tcatggtctt
     7801 attgcccctt attgcgcctg ccagagaatg acagccgccg ttaccagcaa gttgatcagc
     7861 gtcagcggca ggcagatttt ccagccgaag gacattacct ggtcataacg cggacgcggt
     7921 aacgacgcac gaatcaaaat gaacatcatc ataaagaacg cggttttcaa cgcgaaccag
     7981 atgaatggcg gtaacaacgg gccttgccag ccaccgaaga acagcgtcac aatcaatgca
     8041 gagatggtca caatcccgat gtactcaccc acgaagaaca gaccgaactt cataccggaa
     8101 tattcaatgt ggtaaccatc cgccagttcc tgctcggctt ccggctggtc aaacgggtga
     8161 cggtgacata ccgccacgcc cgcgatggca aaggtaataa aaccaaagaa ttgcgggata
     8221 acgttccaca catgcgcctg gctgttgacg atgtcggtca tgttgaatga accggcctgc
     8281 gccaccacgc ccatcaggga aagcccgagg aacacttcgt agctcagggt ctgcgcagaa
     8341 gcacgcatcg cacccagcaa cgagtatttg ttgttacttg accagcccgc aaacagcacc
     8401 gcgtaaaccg ccagacctgc catcatcagg aagaacaaaa tcccgatgtt caggtcggca
     8461 accacccaac ccggactgac tggcacaatc gcaaaggcca gcagcagcga ggtaaaggca
     8521 atcatcggtg ccagggtaaa gatgacgcga tccgagaatt tcgggatcca gtcttcttta
     8581 aagaacattt tgatcatgtc cgcaaccagc tggagcgaac cgccccagcc aacacggtta
     8641 ggtccataac ggttctggaa cagacccagc aggcgacgtt cgccaaagct catgaatgcc
     8701 ccacaggtga caaccaccag caggatcacc accgctttga ggatggtcag caggatctca
     8761 atcagttccg gtgatatcca actcattgtt gtgcctcctt gagatcctca agatgcgcgc
     8821 cagccagcac cggagcaatg ccggacatac ccatcggcaa gcccacctgc cctgccgtca
     8881 gtccttcggc gatttcaacc ggcagcgtga ccgtgttgcc atcgtaacta aaggagacgc
     8941 gtgtacctgc gttcacaccc aacttcgcgg catccgctgg gttgagtttg atgtacggct
     9001 gcggcatacg gctctggaag accggagcac gctgtgacaa ttcatcgctg ccaaacaggt
     9061 ggtaatacgg cgcaatacgc catttcccgt cctgcggctg gaagcgtgcc ggtacgctgg
     9121 tgaagtaatc cagaccattc tcgctggttt caaacagacg cacgcccgga tcgccaaagc
     9181 gcagtttgcc gcccacttcg tcctggaatt tgttccacgc ctgcggggag ttccagcccg
     9241 gtgcccaggc aaacggcact tgcgaacggt gcgcggtcgg ctggttgtta ccttccatcg
     9301 agaaggtgaa catggtgtca atatcctgcg gctgacgcgg ctcatgaacg ctgatattgg
     9361 cgcgcatggc ggtacgaccg ctgtaacggt gcggttcacg ggccagtttc tgcccacgaa
     9421 tacggaatgt cgcatccggc gcagcatctt tgatacctgc cagttccggg attttcgcca
     9481 caacagcgtc aatcacatgg tcgagctgcg tccagtccac ttcacggctc agcagggtgc
     9541 tgtgcagcga gtgcagccag cgccagcttt ccagcatgac agttttgctg tcgtaataag
     9601 ccggatcgta aacctggaag aaacgttggg cgcgaccttc attattaatt accgtaccgt
     9661 cgctttcagc aaagctggcg gcggaaagta ccagatgggc gttttccatg atcgctgtac
     9721 gctgatggtc aaccaccatc accagcggtg ctttagccag cgcagcattc acgcgggtag
     9781 cagaagcgtg acgatgcaga tcgttttcca acaccaccac cgcgtcggcg cgtccggttt
     9841 ccagttcggt taacgcttct tcaagcgaac cgccacccat aatgcccagc cccatgctgt
     9901 tgacggaacg ggcaatcatg gtgataccga cgtcagcgcc gcgacctttc agggctttcg
     9961 cgacgttagc cgccgcctga atcacctcta agctaccggc gttcgtcccg gagataatca
    10021 acggtttctt cgcacctgcc agtgcctgca cgatgacgtc gattttgctt tgcagctcag
    10081 gttcgatacc gtcaaccgct ggtgcagagt tatccagcgc atgggcgatg gcaaaaccta
    10141 aacgcgcctg atcttcaacc ggtgcgcggt aagtccacgc cgcgatatca tccaaacggg
    10201 tgtcatcaac gttggtaaca aacagcggat gcttcgcacg ttgaccgatg ttaaggattg
    10261 ccgcaatctg ccagtcagcc actttctgtg ctgccgccat ttcgcgcgct ttacctttca
    10321 ccgcctgacg cactgccagc gcgacgcgcg cgccggtctg ggtaacgtct tcgcccagca
    10381 ccagtaccgc atcgtaagat tcgatttcgc gcagagccgg agtataaatg ccgccttcac
    10441 gcagcacttt cagcgccagt tgcagacgtt cctgctcacc gtgagcgata ccggtgtaga
    10501 agttttcttc gcccaccagt tcacgcagtg caaagttgct ttccacgctg gcacgcggag
    10561 aaccaatacc gatcactttc ttcgactgac gcagaatatc tgccgcgccc tgcattgcct
    10621 gttcggcgtt gagggtaatg aaatcatcgc cacgacgctg tactggctga cgcggacgat
    10681 ccttcaggtt gacgtaaccg taaccgaaac gaccacggtc gcagaggaag tagtggttta
    10741 ccgtaccgtt gtaacggttt tcgatacgac gcagttcgcc gtaacgttca ccggggctga
    10801 tgttacagcc gatggaacat tgctggcaga tgctcggcgc aaactgcata tcccatttac
    10861 ggttgtaacg ctcggagtgc gttttgtcgg taaatacgcc ggtcgggcaa atttcgacca
    10921 ggttaccgga aaattcgctt tccagcgtgc cgtcttccgg gcgaccgaag tagacgttgt
    10981 cgtgcgcgcc ataaacgccc agatctgtac cgtcagcgta atctttgtag taacgcacac
    11041 agcggtagca ggcgatgcag cggttcattt cgtgagatat gaatggcccc aaatcctgat
    11101 tacggtgggt acgtttggtg aaacggtagc gacggaagct gtgtccggtc atcacggtca
    11161 tatcctgaag atggcagtta ccgccttctt cacataccgg acagtcgtgc gggtggttgg
    11221 tcattaacca ctcgaccaca ctttcacgga actgtttcgc ttcttcgtcg tcaatggaaa
    11281 taaaggtgcc atcggaagcc ggtgtcatac aggacatcac caggcgacca cgcgtgtctt
    11341 ccgcgttttg gtattgcttc accgcacact ggcggcaagc accgacgctt cccagcgccg
    11401 gatgccagca aaagtaagga atatcaaggc ccagagacag acaagcttcc agcaggttgt
    11461 ccgctccgtt gacctcgtat tctttgccgt ctacatgaat tgtagccatt agcatgcttc
    11521 cagttttctc ggtcagggac cgagcgttaa tcgaaattcg gttaccagcg ctctttcagc
    11581 aggttcggct gaatcccatt aatcaaatgg gtattgctga acggctgttt gattcccgcc
    11641 tcaaattctt cgcggaaata tttgatggcg ctctgtaacg gctccactgc accaggtgcg
    11701 tgggcacaga aagttttacc cgggcctaag aatcgacaca gttgctcaag tgtttcaata
    11761 tcgcccggct ggccttcgcc acgctccagc gcacgcagaa ttttcacgct ccacggcaga
    11821 ccgtcgcggc acggcgtaca ccagccgcag gactcacggg cgaaaaactc ttccaggtta
    11881 cgcaccagcg acaccatgtt gatctcatgg tcaaccgcca tcgccagcgc cgtacccaga
    11941 cggctgcccg ctttaccgat actttcgaat tccatcggca gatcaaggtg cgcttcggtc
    12001 aggaagtcag tccccgcgcc gcctggctgc caggctttaa atttcagacc atcacgcata
    12061 ccaccggcgt aatcttcgag gatctcgcgt gcggtggtgc cgaacggcag ttcccacagt
    12121 cccggatttt tcacccgacc ggagaagccc atcagcttgg tgccagcatc tttacttttc
    12181 gagatgttct gataccactc cacgccgtta gcgaggatcg ccggaacgtt acacagggtt
    12241 tcgacgttgt tgacacaggt cggtttgccc catacgccgg aggttgccgg gaaggggggt
    12301 ttcgagcgtg ggttagcacg acgcccttct agggagttga ttaacgctgt ttcttccccg
    12361 cagatgtagc gccctgcccc ggtatggacg aacagttcga agtcgaaacc tgttcccata
    12421 atgtttttgc caagcaagcc cgcttcagtg gcttcggcaa tggcgcggcg cagatttact
    12481 gccgcttcga tatattcgcc acgcaggaag atgtagccac ggtaagcttt cagcgcaaac
    12541 gcggagatga gcataccttc caccagcagg tgcggcagtt gctccatcaa caggcggtct
    12601 ttataggtgc ccggctccat ttcatcggcg ttacacagca ggtaacggat gttcatggat
    12661 tcgtctttcg gcatcaggct ccacttcagg ccagtagaaa agcccgctcc gccgcgccct
    12721 ttcagaccag cgtcttttac ctgattaacg atttcgtccg gagacagccc ggtcagcgcc
    12781 ttacgcgccc cttcgtaacc gtttttgctg cggtattcgt ccagccacac tggctgtttg
    12841 tcatcgcgca gacgccaggt cagcggatgc gtttcgggag tacggataat gtttttcatt
    12901 tataccgctc cagcagttca gggatcgctt ccggggtcag atgcgcgtga gtgtcctcat
    12961 cgatcatcat gtttggccct ttatcacagt tccccaggca gcaagttggc agcagcgtaa
    13021 agcggccatc aaatgtcgtt tgccctggtt tgatgttcag ctttttctcg agcgccgcct
    13081 gaataccctg atacccgttg atatgacaga ccacgctgtc gcaataacgg atcacatggc
    13141 gaccaaccgg ctggcggaag atctgactgt agaacgttgc cacaccttcg acgtcgcttg
    13201 ccggaatacc cagcacatcg gcgatcgcgt ggatcgcacc atccggcacc cagccacgct
    13261 gcttctgaac gattttcagc gcttcaatgg acgccgcacg cgggtcttcg tagtggtgca
    13321 tctcgtgctc aatcgcttca cgctctgccg cactcagctc aaaagcctcg gtttgtggtt
    13381 gttgattctc gtgcataatt agcggtccac atctgacata acaaaatcga tactgcccag
    13441 ataaacaatc aggtcagaca ccaggctgcc gcggatcgcc gccggaattt gctgcaaatg
    13501 cgcataactc ggcgtgcgga tacgagtgcg ataactcatg gtgctaccgt cgctggtcag
    13561 gtagtaactg ttgatcccct tggtcgcctc aatcatctgg aaagattcat tggcaggcat
    13621 caccggcccc cacgacactt gcaggaagtg ggtgatcagg gtttcgatat gttgcagcgt
    13681 gcgctctttc ggcggcggcg tggtcagcgg gtgatccgct ttgaacgggc cttccggcat
    13741 gttgttgagg cactgctcaa gaatgcgcag actctggcgc agctcttcca ctttcagcat
    13801 tacgcgggtg tagcagtcag aaacaccacc accaaccggg atttcaaagt cgaagttttc
    13861 atagccagaa taaggacgcg ccttacgcac gtcgaagtcg atcccggtag cacgcaggcc
    13921 cgcgccagtg gtgccccact ccagcgcctc tttcgcgcca taggcggcaa cgccctggga
    13981 acgacctttc agaatggtat tttgcagcgc cgctttctcg taagacgcca gacgtttcgg
    14041 catccagtcg aggaactcac gcagcaggcg atcccagccg cgcggcaggt cgtgcgctac
    14101 gccgccaata cggaaccacg ccgggtgcat acggaaaccc gtgatcgctt ccaccagatc
    14161 gtaaattttc tgacgatcgg taaaggcgaa gaacacgggc gtcattgcgc cgacgtcctg
    14221 aataaaggtc gagatgtaca gcaggtggct gttgatacgg aacagttcgg agagcataac
    14281 gcgaatgacg ttaacgcgat ccggcacggt gatcccggcc agtttctcta ccgccagcac
    14341 gtaaggcatt tcgttaacgc agccgccgag gtattcaata cggtcggtat acggaatgta
    14401 gctgtgccag gactggcgct cgcccatttt ctccgcacca cggtggtggt agccgatgtc
    14461 tggtacgcag tcgacaatct cttcgccgtc gagttgtaaa acgatacgga aagccccgtg
    14521 cgccgacggg tggttcggac cgaggttgag gaacatgaag tcctcgtttt cggtgccgcg
    14581 cttcatcccc cactcttccg gtttgaaggt cagggcttcc atctccagat cctgtttggc
    14641 tttggtcagc tcaaacggcg agaattcggt agcgcgcgcc gggtaatctt tacgcagcgg
    14701 gtgacctttc caggtttgcg gcatcatgat gcggcgcagg ttcgggtgac cgtcgaaagt
    14761 aatgccaaac agatcccagg tttcacgctc ataccagtta gcgttcggga acagtttggt
    14821 gaaggtcggt acgtgcaggt cgttttctgc cagcgccacc ttcagcatga tgtcgcggtt
    14881 acgatcgata gaaatcagat ggtagaaaac ggaaaaatcc gcggcaggta acccttcgcg
    14941 gtgtgtgcgc agacgttcgt ccatgccgtg taagtcaaac agcatgacgt aaggtttcgg
    15001 cagtttcttt aagaaatcgc caacttccag taattgttca cgcttgatcc acacaacggg
    15061 aaccccggtg cgagtcgcct gaacagtaaa ggcatccggc ccaaaacggt tgcgcagttc
    15121 gccaattacc ggatcatcaa gatgatcgcg ggtctgccag gcgggttctt gcgcggttaa
    15181 gtcggtcata ttgttcacca ttgcaaatgg tccgtggtga ctgtcggcgc agtaagcttc
    15241 gcgaaataga tttaggaata agcgaagaaa aatccctttg ccgacaggcg caaattaaat
    15301 ctcgtcaggt gtacgcaggt tggttacggc aatgcgttca ccgcgcttgc gttcgcgctc
    15361 tgattgcata ttggcgcgat aaacgccctg atcgccaacc acccaggaga gcggacgacg
    15421 ttctttgccg atagattcct gcaacagcat cagtgcctgc atgtacgctt caggacgcgg
    15481 cgggcagccc gggatataca catcaaccgg gatgaattta tcgacgccct gcacaacgga
    15541 ataaatatcg tacataccac cagagttggc acaggcaccc attgagataa cccattttgg
    15601 ttccagcatc tggtcataca gacgctgaat aaccggtgcc attttggtaa agcaggttcc
    15661 tgcaaccacc atcaggtcag cctgacgcgg cgaagcacgc aatacttctg cgccaaaacg
    15721 cgccacgtca tgcaccgcgg taaacgaagt caccatctca acgtaacagc aggaaagacc
    15781 gaagttatac ggccaaattg agtttttacg accccagtta accatgtcat tgagcttgcc
    15841 cataaacacg tttttgttaa cttcttgctc cagagggtcg gttacgatct cctgcttttg
    15901 cagggggtaa cggtcgttct caccgttggg atctatgcgg gtgagcgtat aatccatctt
    15961 aatgcctcgc ggttagcgtt gacgattagc gatactgttc gtttccgggt tcatacgctc
    16021 gcggcgtgaa cgcgcgggcg tccagtccag cgcgccaata cgcaccagat aaaccagacc
    16081 tgccagtaac acaaaaataa aaattgcagc ttccacaaag cctacccagc cgctttcgcg
    16141 gatagaggtt gaccatgcga acagatacag cgcttcaacg tcgaagataa cgaagaacat
    16201 ggccaccaga taaaacttgg cggacaggcg taagcgggcg gagccgaccg agtcgatacc
    16261 ggattcaaac ggcacgtttt tcgacctcgc gcgtgcgcga ccgcctaaaa accaaccacc
    16321 taccagcatt aggcaacaca ggccaatggc aacgataaga aagatagcga atgcccagtg
    16381 atgagcgatg acttcagtgg atgttgacat actcattgct tactcatcaa aagtagcgcc
    16441 agattcactg ctcttcacgg cagatggacg ccacatcgat tcatggggag gaataaaaaa
    16501 aaccttacaa tcactgtaga aattctttta tacagctaat tgatgtggtc ttttactcct
    16561 ttctataacc ttttgtcaac tttaacaaaa gtttcttcac attagtttac ataatatcaa
    16621 caccattagc atttaatgcc ctttcacccc agatccttga cgactccagg ataattagat
    16681 gttgttgaat cgtgtccgtt gtgaagcaat ggaaaaaata cgggtctatt ttgacaggaa
    16741 tttgtgtcga ttcctccccc caaaagagag tattttcttg atctgtgaca cgcttttgtc
    16801 attccataac aaaaacgcag caacaaattt acgtattttt taacatcatt gtagcaggtg
    16861 atttttttca ggcgattatt tgtgcgttcg ggacgtgaat ctctggtgat tgaaaaatga
    16921 acagttttgt acgttctgca ctatgcgagg aaggattttt actaaaaaaa agccgctggg
    16981 gtttaaaaca cccccagcgg ctcgtttttt acactattgt ctcaggaatt atctatcgtc
    17041 cgtcgattac tcgatatccc tttcaatcaa caatgaatca tccccttccg gagcagacat
    17101 tgggctgtat tgccacggat tatggtagct ctccatcgcc tgatagatca cctgggccag
    17161 ctcattatta ctggacgggt catagcacag caaatattcg gtatcaggta gcggcggtaa
    17221 gccatctact ccactcagca cacgcaggtc cgggctcatc atctcaaccg gccttgccgt
    17281 cacgccaaga ccggctttca ctgccgcacg aacggccgga agcgtcgagg cgacataagc
    17341 cagtcgccat ggaatatctg ctttattaag cgttgccagc accatatcgc gaaacggact
    17401 tggatcatcc agcaatacaa gagggatcgg ctcgcctttt tgcaatacgt attccgctgc
    17461 gcagtaccag tgtgttggcg aggtacgcag gttcaatgcc ttaaacgctg aaggacgatg
    17521 ggtggttacc atcaaatcca cttcctggga ttccagcatt tctgccatat aggcattacg
    17581 tttaacgcgg acatccagcg ctaatttcgg ataaaccgaa ctcacgcgat ttaacaggaa
    17641 aggtaagatc gtatcggcag attcatctga agcaccgata gttaacacgc cctgaagatt
    17701 actgaacatt aatgatgagc aggcctcatc attaaaacgc aggattttcc tggcgtaacc
    17761 aagaagttga atgccatgtt cagttaacag tttgttgcga ccgtgacgag cgaacagttc
    17821 tttcccaacg agttgttcca gacgctgcat ttgctgactt acggcggact gagtacgaca
    17881 cacagcggca gctgcggcag caaaagtgtt cagatcggca acagcaacaa atgttctcag
    17941 cagatcgagg tcgaggttaa ttatcggacg atttgcactt atcatatatt atcacttact
    18001 ggcggctcat actgagctgg ttaatgctgt gcacacacaa acaagcaatt ccatttgtaa
    18061 tgtgcctccc tggcagtttc atccggaacc cggacgaaag taaaaatgca tatgagttgc
    18121 actaaaaaag cgactcacat tgttccgtta taatgcctga agtagatcac agaatatatc
    18181 ttcagggatc gcatatctat taagttactc actcttttct atttatgaca tgcgcgtgtt
    18241 tgtataaatg taaatgtgag tccttgttcc actctcgtgc agcatcgctg gtcatacgcg
    18301 aacacgtaca aacagcaatg gtgaggcggc atcaagagca gggatccgtc atttatgcga
    18361 gcattttacc ccaaaaacct tttatttata agggccattg cgaatcatct gatgcaaagt
    18421 tatgttatgt taggcaaagt aatcttctat tattaataag cacatcaaaa cctttttgaa
    18481 tattaaataa taattaatta gcatcatcct cattcattaa ttccgcttaa caatagtttc
    18541 acaccttgcc ccattacgac acctcggaaa tcatcacgct gttaaactct ccgtaatgcg
    18601 gaaatatcat catcgcgttt cattagtgaa ttcttaaatg aggcattttc acacaattat
    18661 cttacagata aaaaaaccag acttacaatt aagaatcaga acaattcact atataacatt
    18721 gcatgtaaag catatacacc tcattatttt gtcatcatta agttattaac agcacaatcg
    18781 agccttcccc tctggcaaaa tcttattctg cagaccttca aaacaccgtc ctgggggagt
    18841 acattgttct aagctgactt ccacggcagg gagtggcgat aacagcaaaa aaggtcaaga
    18901 ttcatgtccc ccattgaaaa atccagcaaa ttagagaatg tctgttatga catccgtggt
    18961 ccggtgctga aagaagcaaa acgcctggaa gaagaaggta acaaggtact gaaactgaac
    19021 atcggcaacc cagccccgtt cggttttgac gcgccagatg aaatcctcgt tgacgtgata
    19081 cgcaacctgc ctaccgctca agggtattgc gattccaaag gtctttactc cgcgcgtaaa
    19141 gccatcatgc agcactacca ggctcgtggc atgcgtgatg ttaccgtgga agatatttac
    19201 atcggcaatg gtgtatcgga gcttatcgtt caggcaatgc aggcattgct gaacagcggg
    19261 gacgaaatgt tggttcctgc accagattac ccactatgga ccgcggcggt ttcgctttcc
    19321 agcggtaaag cggtgcatta tctttgcgat gaatcctctg actggttccc ggacctcgat
    19381 gatattcgcg ctaaaattac gcctcgtacg cgtgggatcg ttattatcaa cccaaataac
    19441 ccaaccggcg cggtatattc caaagagctt ttaatggaga ttgtggagat tgcacgtcag
    19501 cataatctca ttatcttcgc cgatgaaatt tatgacaaaa ttctttacga cgacgctgag
    19561 catcactcaa ttgcgccgct ggcacctgac ctgctgacca ttacctttaa cggactgtcg
    19621 aaaacgtacc gcgttgcagg cttccgtcag gggtggatgg tgttgaacgg gccgaaaaaa
    19681 cacgccaaag gctacatcga aggtctggaa atgctggctt caatgcgcct gtgtgctaac
    19741 gttcctgcgc aacacgccat tcagaccgcg ctgggtggtt atcagagcat cagtgaattt
    19801 attacccctg gcggtcgtct ttatgagcag cgtaaccgcg cgtgggaact gatcaacgat
    19861 attccgggcg tttcctgcgt gaaacctcgt ggtgcgctgt atatgttccc gaaaatcgac
    19921 gccaaacgct ttaacattca cgacgatcag aaaatggtgc tggatttcct gttgcaggaa
    19981 aaagttctgt tggtgcaagg gacggcattc aactggccgt ggccggatca cttccgcatt
    20041 gtcacgctac cgcgtgtcga tgatatcgag ctgtctttga gcaagttcgc gcgtttcctt
    20101 tctggttatc atcagctgta atcttaattt cactgccgga gattgcatcc ggcagcgtta
    20161 tcccgccaca atgacctgat gatgtcatca tacgtaaggt cactatgaaa cagagccatt
    20221 tttttgccca tctctcccgc ctgaaactca ttaaccgctg gccgctaatg cgcaacgtgc
    20281 tgacggaaaa tgtgtccgaa cacagtttgc aggtagcgat ggtcgcccat tcgctggcag
    20341 ctatcaaaaa tcgaaaattt ggcggtaatg tcaacgccga acgtatcgct ttactggcga
    20401 tgtaccacga tgcctcagaa gtgccaccgg cgatctccct actccggtga aatacttcaa
    20461 ttcgcaaatc gctcaggagt acaaggctat tgaaaaaatc gctcagcaaa aactggtcga
    20521 tatggttccg gaagagctgc gggatatctt tgcgccgtta attgacgagc atgcatatag
    20581 cgatgaagaa aaatcgctgg tgaaacaggc agatgcactg tgtgcatatc tgaaatgtct
    20641 ggaagaactc gcggccggaa ataatgaatt cttgctggca aaaacgcgac tggaagcgac
    20701 gcttgaagcg cgtcgcagcc aggagatgga ctacttcatg gaagtatttg ttcccagctt
    20761 ccatctttcg ctcgatgaga ttagccagga ttcaccgctg taagcagccg gagtctgcgt
    20821 cgcatcaggc aataagcgcc ggatgcgaca tcaggctctt gtcaaaacgg aaacagcatc
    20881 gggatcatca ccacacaaac cgccatcacg ataatggtga acggtacccc caacttcaca
    20941 aagtcactga agctgtaatt tcccggacct aaaaccagtg tgttaacagg tgaagaaacc
    21001 ggtgtcataa aggcggcgga tgctgccatc gccacgacca tcgcgaatgg ataaggcgac
    21061 acccccatcg ttttggcagc agccagcgca atcggagcca tcaacaccgc cgtcgcggta
    21121 ttagagataa atagcccaat aaccgccgac aagacaaaca aacaccccag catcatatgt
    21181 ggcccgtaac caccgccaat gtccatcagc cctttcaccg ccagcgcgac acctcccgtt
    21241 ttctgtaatg ccacagcaaa cggcatcatc ccaacgatca aaataatgct cggccagtga
    21301 atggatttat aggcgctttc agcatctata cagcggaatt tccccatcag caggcaggcg
    21361 atgatagcgg caacaggatt aggaatttca tctgtcagca ttaacgccac cattagcacc
    21421 agacagaaaa tggcatgggg tgcctggctg tgcgcgggcg atgcttcact cacctcttcc
    21481 ggtaagttca gcgctacgaa gtcgcggccc tgtttggcca gcataccgat cagtttccag
    21541 ttacccacaa ccaggatgat atcgcccagc agcagaggct catccgccag cgaaccttcc
    21601 agcgccacgc cattgcgctt tagccccacc acattcagtc cgtagcgggt acgaaaacca
    21661 atttcgcgca ccgatttacc aatcagttct gactcaggaa ttaatgaaat ctctgccatg
    21721 cccacatcaa gggcctggtc agaaaaatac tcgccgcgca gtaccatcgg ctccagcaat
    21781 tgctcactac aaaattgccg gagatcgaca tcagccgcag acatatcaat aagcaaaacg
    21841 tcacgcgcgc gaaattcaga aaccccatta acgttcacga taacgcgacg aaaacgccgc
    21901 cagcgttcaa caccgatgac gttagcgcca taacgctcac gtaatttgag atcatccagc
    21961 cgttgaccaa tcattggcga tccggggcga atagccagac gtcgcgcacg cccggtcagt
    22021 cgatattcac ggataagatc gcgaaaggtt cgacgcgtcc agccttcgcg ctgcggggtc
    22081 tgggtatccc ctttcagcat gaaacgcatc actaacatat acaaaatacc cagcaccagc
    22141 acgaccaggc caacaggtgt tacgctaaag aaactgaagc cgtgatagcc ttcacgcagc
    22201 aattcactgt tgactaccag gttcggcggc gtcgccacca gcgtcatcat gccgctaatc
    22261 agcccggcaa aacttaacgg catcatcaga cgtgacggcg aagtttgcat acgcatggca
    22321 acgcttaaca ccacgggaat aaagatagcg acaacgccgg ttgaactcat aaacgcgcca
    22381 agccccgcga cggtcagcat caacaaaacc aacattttga tttcactgtt gcccgccact
    22441 ttgaccagcc atgttcccat tacggtggca acaccggtac ggaccaaacc atcgccaata
    22501 ataaacaagg cggcaatcag gacaacgtta ggatcagaaa agccggaaaa tacttcgggg
    22561 accgtcagcg ttccgcttaa tgcaaacgcg acaataacaa acaaagcgac cgcatccata
    22621 cgcactctgc ccgtcgcaaa caagacgatg gcaacggcca gtaatgaaag aacccaaatc
    22681 aattcaccgt tcacaactta tccttgttaa ttgaggggga tgacttgatt ctgccataaa
    22741 aaagccccga cgagacgggg ctaaatcat
//
LOCUS       DAJVUK010000058        22652 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.058, whole genome shotgun sequence.
ACCESSION   DAJVUK010000058 DAJVUK010000000
VERSION     DAJVUK010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22652
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.058"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..254)
                     /locus_tag="OQQ57_002042"
     CDS             complement(<1..254)
                     /locus_tag="OQQ57_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCS1956814.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGD"
     gene            complement(245..715)
                     /locus_tag="OQQ57_002043"
     CDS             complement(245..715)
                     /locus_tag="OQQ57_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCS1956815.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            complement(900..1694)
                     /gene="thyA"
                     /locus_tag="OQQ57_002044"
     CDS             complement(900..1694)
                     /gene="thyA"
                     /locus_tag="OQQ57_002044"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HCS1956816.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYAPHPGIKAPVAI"
     gene            complement(1701..2576)
                     /gene="lgt"
                     /locus_tag="OQQ57_002045"
     CDS             complement(1701..2576)
                     /gene="lgt"
                     /locus_tag="OQQ57_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HCS1956817.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            complement(2727..4973)
                     /gene="ptsP"
                     /locus_tag="OQQ57_002046"
     CDS             complement(2727..4973)
                     /gene="ptsP"
                     /locus_tag="OQQ57_002046"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCS1956818.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGLPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPILLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGM
                     GGLIRGGL"
     gene            complement(4986..5516)
                     /gene="rppH"
                     /locus_tag="OQQ57_002047"
     CDS             complement(4986..5516)
                     /gene="rppH"
                     /locus_tag="OQQ57_002047"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HCS1956819.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNTSAYRRKRG"
     gene            6201..6890
                     /gene="mutH"
                     /locus_tag="OQQ57_002048"
     CDS             6201..6890
                     /gene="mutH"
                     /locus_tag="OQQ57_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HCS1956820.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWTPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            6959..7672
                     /locus_tag="OQQ57_002049"
     CDS             6959..7672
                     /locus_tag="OQQ57_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCS1956821.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            7810..8028
                     /gene="ygdR"
                     /locus_tag="OQQ57_002050"
     CDS             7810..8028
                     /gene="ygdR"
                     /locus_tag="OQQ57_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HCS1956822.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            8136..9176
                     /locus_tag="OQQ57_002051"
     CDS             8136..9176
                     /locus_tag="OQQ57_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HCS1956823.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPSIVTIQNPYSLLNRSFEVG
                     LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKTAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(9208..10401)
                     /gene="lplT"
                     /locus_tag="OQQ57_002052"
     CDS             complement(9208..10401)
                     /gene="lplT"
                     /locus_tag="OQQ57_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HCS1956824.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNSTPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(10394..12553)
                     /gene="aas"
                     /locus_tag="OQQ57_002053"
     CDS             complement(10394..12553)
                     /gene="aas"
                     /locus_tag="OQQ57_002053"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HCS1956825.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
     gene            12942..13973
                     /gene="galR"
                     /locus_tag="OQQ57_002054"
     CDS             12942..13973
                     /gene="galR"
                     /locus_tag="OQQ57_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HCS1956826.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            complement(13980..15242)
                     /gene="lysA"
                     /locus_tag="OQQ57_002055"
     CDS             complement(13980..15242)
                     /gene="lysA"
                     /locus_tag="OQQ57_002055"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HCS1956827.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            15364..16299
                     /gene="lysR"
                     /locus_tag="OQQ57_002056"
     CDS             15364..16299
                     /gene="lysR"
                     /locus_tag="OQQ57_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HCS1956828.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     MIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASICAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
     gene            complement(16286..16978)
                     /gene="ygeA"
                     /locus_tag="OQQ57_002057"
     CDS             complement(16286..16978)
                     /gene="ygeA"
                     /locus_tag="OQQ57_002057"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HCS1956829.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(17107..18522)
                     /gene="araE"
                     /locus_tag="OQQ57_002058"
                     /pseudo
     CDS             complement(17107..18522)
                     /gene="araE"
                     /locus_tag="OQQ57_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-proton symporter AraE"
     gene            complement(18837..19598)
                     /gene="kduD"
                     /locus_tag="OQQ57_002059"
     CDS             complement(18837..19598)
                     /gene="kduD"
                     /locus_tag="OQQ57_002059"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HCS1956830.1"
                     /translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
                     PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
                     EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
                     SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
                     GLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR"
     gene            complement(19628..20464)
                     /gene="kduI"
                     /locus_tag="OQQ57_002060"
     CDS             complement(19628..20464)
                     /gene="kduI"
                     /locus_tag="OQQ57_002060"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HCS1956831.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLHNEFLVEKVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
                     MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD
                     LR"
     gene            complement(20751..21932)
                     /locus_tag="OQQ57_002061"
     CDS             complement(20751..21932)
                     /locus_tag="OQQ57_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708633.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HCS1956832.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
                     PCTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
     gene            22187..22585
                     /locus_tag="OQQ57_002062"
                     /pseudo
     CDS             22187..22585
                     /locus_tag="OQQ57_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
BASE COUNT         5809 a         6061 c         5455 g         5327 t
ORIGIN      
        1 cagtcaccct gtccgacaat ttccagccct tcgccggtac agatgccatg acaataaccc
       61 gccctctgga gatgcttcgc gacggtaaat acccgcagcc agatttcatc ttccagcgcc
      121 agcttacggg tgctcgttaa actttcacgc tgtaacgcag gcagaaagcg tgcagccccc
      181 agcaacaata cgctactgat cgccatagca atcaacactt ccagcagaga aaaaccttgc
      241 tcttttacag gcatccttct gtttctcctt gctgacaaag ccggagtctt ccccacggcg
      301 aaaccaccag ccaccactcg cccgttgagt ttttgaagcg aatatgcccg gcccatgcgg
      361 tattgcgcag gccaaagaaa gcaagcgaag gtgtcaggtc gctcatttcg acttcgggcc
      421 agcgtggcac aaagaccaat ggtgaactgc catgacaggt attggcccca gcagcggaac
      481 tcacaaggca ccataacgtc ccctccctga taacgctgat actgtggtcg cggttatgcc
      541 agttggcatc ttcacgtaaa tagagcaaat agtcccgcgc ctggctggcg gtttgccata
      601 gccgttgcga ctgctgccag tattgccagc catagagtcc acttgcgctt agcatgacca
      661 aaatcagcat cgcgaccagc gtttcaatca gcgtataacc acgttgtgtt ttcatgccgg
      721 cagtatggag cgaggagaaa aaaagacgag ggccagtttc tatttcttcg gcgcatcttc
      781 cggactattt acgccgttgc aggacgttgc aaaatttcgg gaaggtgtct cgaagaattt
      841 aatggagggt aaaaaaaacc gacgcacact agcgtcggct ctggcaggat gtttcgtaat
      901 tagatagcca ccggcgcttt aatgcccgga tgcggagcgt agccttcaat ctcaaaatct
      961 tcgaaacggt agtcgaagat ggattcgggt ttacgtttga taatcaactt cggcagcgga
     1021 cgcggttcgc ggcttaattg cagatgagtt tgatccatat gattgctgta caggtgcgtg
     1081 tcgccccccg tccagacaaa atcgcccact tccagatcac actgctgcgc catcatatgc
     1141 accagtaacg cgtagctggc aatgttaaac ggcaggccga ggaaaacgtc acaggagcgc
     1201 tgataaagct ggcaagagag tttgccgtct gccacataga actggaagaa cgcatggcac
     1261 ggtgccagcg ccattttatc cagttcgcct acgttccacg ctgaaacaat aatgcggcgc
     1321 gaatccgggt cgtttttcag ctggttcagt accgtagtga tctggtcaat atgacgacca
     1381 tccggcgttg gccaggcgcg ccactgttta ccatacactg gcccgaggtc gccgttttca
     1441 tcggcccatt cgtcccagat ggtgacattg ttttcgtgta gataagcaat gttagtgtcg
     1501 ccctgcagaa accacagcag ttcatggatg atggaacgca ggtggcaacg tttagttgtc
     1561 accagcggga atccatcctg caggttaaaa cgcatctgat gaccaaaaat ggaaagcgtt
     1621 ccggttccgg tacggtcgtt tttctgtgtg ccttcgtcga gcactttttg catcagttct
     1681 aaatactgtt tcatggttcc tcaggaaacg tgttgctgtg ggctgcgacg atatgcccag
     1741 accatcatga tcacacccgc gacaatcatc gggatggaaa gaatttgtcc catgctgatg
     1801 tactgcaccc aggcaccagt aaactgcgcg tcgggctggc ggaaaaactc aacaatgatg
     1861 cgaaacgcgc cgtaaccaat caggaacaaa cctgagacag ctcccattgg gcgcggttta
     1921 cgaatataca ggttgaggat aataaacagc actacacctt ccagcaacag ctcgtaaagc
     1981 tgtgatgggt ggcgcggcag cacaccgtaa gtatcgaaaa tggattgcca ctgcgggttg
     2041 gtttgcagca gcaaaatatc ttctgtacgg gagccaggga acagcatggc aaacgggaag
     2101 ttcgggtcaa cgcggcccca caattcaccg ttaataaagt tgcccagacg cccggcacca
     2161 agaccaaacg gaatgagtgg tgcgataaaa tcagagacct ggaagaagga acgtttagta
     2221 cggcgggcga agataatcat caccacgata acgccaatca ggccgccgtg gaaggacatg
     2281 ccgccgtccc agacacggaa cagatacagc ggatcggcca taaactgcgg gaagttgtag
     2341 aacagaacat aaccaatacg tccaccgagg aagacgccga ggaagcccgc atagagtaag
     2401 ttttcaactt catttttggt ccagccactg cccggacgat tcgcccgacg tgttgccagc
     2461 cacattgcaa aaatgaaacc caccagatac atcaggccgt accagtgaag cgccacgggt
     2521 cctattgaga aaatgaccgg atcaaactcc ggaaaatgca gatagctact ggtcatctgt
     2581 caccacaagt tcttgttatt tcgctgaaag agaacagcga ttgaaatgcg cgccgcaggt
     2641 ttcaggcgct ccaaaggtgc gaataatagc acaaggggac ctggctggtt gccggatacc
     2701 gttaaaagat atgtatatga tccgcgctat aaccctccgc gaatcagccc gcccatgccg
     2761 cgacgctcca taaaggctgc aacctgatga cgaacttcgg tcgccagttg cgcttccaga
     2821 ctacgctgcg caagattttc tgcttcggca aaatcaatgc gccgcagcag gtattttacc
     2881 cgcgctacag aacgtccgtt catagacaga tggcgatacc caagcccaat gaggattgcc
     2941 acgcacatgg gatcgcccgc catttcaccg cacaaacgga gatcgatacc atgtatttcc
     3001 gcttcccggg cgatcattgc cagagctcgt aacattgcag gatgaaggct gtcataaatg
     3061 ttcgccaccc gggtattgtt gcgatcaacg gccagaatgt attgagtcag atcgttggtg
     3121 ccaacagaga tgaaatcgac ccgctttgcc agatgcggca gcataaatac cattgacggt
     3181 acttccagca tgatgccgat acgtggtttg ggaatttcgt aaccgatcat ctcctcgact
     3241 tcacgtccgg cacgttcaat caggcggcgt gcttcgtcaa cttcatcgag gctggtgacc
     3301 atcggcaaca gaatattcag gttgcccgta gcggcattag cacgcagcat cgcccgcacc
     3361 tggatcaaga agatctccgg ctgatcgagc gtaatgcgaa tcccacgcca acccaggcat
     3421 ggattctctt cgctgatcgg catgtaaggc agctgcttat ctgctccgac atccagcgta
     3481 cgcaaggtga cgggtttatc attgaacatt tgcagcatcc cctgatactg cgccacctgt
     3541 tcttcttccg acgggaaacc actttgcagc atgaatggga tttcagtgcg ataaagaccg
     3601 atgccatcaa tacggctgcc cagtttttct tcatgttccg ggcttaaacc agcattgagc
     3661 atgactttta tacgctcacc gctttttaac tgcgcgggta aattgacgtc atcttccgcc
     3721 agacggctaa gctcaatctc ttcactaatt agccgctgat attcttgcag cagtatcggc
     3781 tccggatcga ccagcaattc accgcgatag ccatcaacga tcagcgtcct acgatgcagc
     3841 accgaaggct gaatatccgc gcccatcacg gtagggagcc ccagcgcacg taccatgatc
     3901 gcagcatggg agttggctgc gccatctcgc acgacaacac cgactaagcg atcctggggc
     3961 agctcagcaa gagttgtcgc tgacagttca tctgccacca gaatgaaacg ttccggccag
     4021 gcgttcggcc cttgattagc gtcatcaaga tgaaacagca atcgctgacc cagcgcacgt
     4081 aaatcgccag cccgctcttt gagatagtta tcgcttagcg cggcaaactg ttcggcaaat
     4141 ttttcaatga ccgtttttac cgcccactct gccaccgagc ctttatcaac ctcggcaaac
     4201 aattcgcgac gcagccgggt gtccgaaagc aggtgcgagt aaagatcgaa aatagccgcc
     4261 gtttcttttt gtgctccggc ggcaaagcgt ttgctgtagc ggcgaaactc gtttgccgct
     4321 tcttccagcg ccccggtcaa tcgttcgcgt tccagagccg gatccagcgt tgatgcctga
     4381 tacacctgtt ccattaaagg taacgtggca tcctgccagc cttcggcaat cgccacacca
     4441 ggtgctgccg gtaatgcgcg gattcgcgtc tggcgatatt gcccaaacaa ggcagtcaac
     4501 tgcgactgag aaagaatagc tgccatctgg gtggcaagcg tcaccaggaa ggattcttca
     4561 ctttcgtcat actggcgcaa ctctcgttgc tgtaccacca gtacaccaag caactggcga
     4621 cgttgaataa ttggtacgcc taaaaacgcg cggaaacgtt cttcttttac ggaggggatg
     4681 tatttgaagc tggggtgctt ttgcgcatct gcaaggttta tcggttccgc cagcctgcca
     4741 accaggccga cgatcccttc atcaaacgcg agcgttacag tgcgaccgcg tggttttttc
     4801 agcccccggg tcgccatcag gtagtaacaa cgtcgatcat gatcggccag gtagaccgaa
     4861 cagacctcgg tatccatcgc aagacagatg tcggtaacca gaatatttaa cgcctcattc
     4921 aggcgtggtg cgctggctac cttttcgact atttcgcgca ggcgagtgag cataattggc
     4981 gtgacttaac ctcttttacg tcgataagca gatgtgtttt gtggttttgg cgtattttcc
     5041 tgcagtgaca tcaccacact cgcgaactct ttcattaccc tacggtagac atcacgttta
     5101 aatgacacca cctgtctgac cggataccag taacttaccc atcgccagcc gtcaaactct
     5161 ggtgtactgc tggtttgcat attgatttct gcatcgccgc tcaccagctg caagagaaac
     5221 catttttgtt tttggccgat acaaaccggc ttcgtgtccc aacgcaccaa acgtttcggt
     5281 aatttgtagc gcaaccagtt acgcgttgaa gcaaggattc gaacgtcttt gcggcttaat
     5341 cctacttctt caaacaattc acggtacatc gcctgctctg cggattctcc ggggttgatt
     5401 ccgccttgcg gaaattgcca ggagtgctga ccaaatcgcc gggcccacat tacctgcccc
     5461 tggcgattac aaatcacgat acctacgttt gggcggtagc catcgtcatc aatcaccgga
     5521 ctacctcaaa ataaagcttt atatacgaat gattgtttca tactccagga agacggtaaa
     5581 ccactctctg cagggcatta cacactaata acaattgaat aactcacagt tatgtgcaga
     5641 gttataaaca gaggaagggg tggatagccg tttttattca ccttttctgt ggatagagtt
     5701 gtgaagaact acggaattac tacgggaaaa cccggagcat tctgaataag cccgatatag
     5761 gcattttaaa atattcatta taagtcaatg cattacatgt aatttgagta atgaaaaaga
     5821 gtaattcgtg acccaggtca cacctctcat ttacgggttg gcgaaagatc aaccaatgcc
     5881 gtatttatcc acagaatgtg ccactaagtt aagcactgaa ccactaaaaa ctggagtttc
     5941 gtcgcacgtc aaggctgtaa atggaaacag tagtggaggt ttttcacagt tatcccagct
     6001 ttctgtggat aacatggtgt aagatcctgt ttattttcag tgaccagatt tggaaaacct
     6061 attgcagtgc tgcgcaactc gattatcggc agcctaaaaa gcaatataaa tcagagaatt
     6121 gaacaacaca tgtggaaaaa gttacactgc gaatattcgg tacataattg ctgtttgttt
     6181 tttaaccaag gtatcatgac atgtcccaac ctcgcccact gctctctcct cccgaaactg
     6241 aagaacagtt gttagcgcaa gcacagcaac tttctggtta tacattggga gaactggcgg
     6301 cacttgccgg gctggttacg ccagagaatt taaaacgcga taagggctgg attggcgtgt
     6361 tactggagat ctggctaggt gccagcgcag ggagtaaacc tgagcaagat tttgctgctc
     6421 tgggcgtgga acttaaaact atccctgtgg atagtcttgg tcgtccgctg gaaacaacat
     6481 tcgtttgtgt tgccccgtta acgggtaata gcggggtgac ctgggaaacc agccacgtgc
     6541 gccacaagct caaacgcgta ctgtggatac cggttgaagg cgagcgcagc atcccgctgg
     6601 cgcagcgtcg cgtaggatcc ccgttgctgt ggaccccgaa tgaagaggaa gaccgacagc
     6661 tacgcgaaga ctgggaagaa ttaatggata tgattgttct cggtcaggtt gagcggatca
     6721 ccgctcgtca cggggaatat ttacagataa gaccgaaagc agcgaatgcg aaagcgctta
     6781 ccgaagccat tggtgcccgg ggcgaacgga ttctgacgct gccacgcggc ttttatttga
     6841 agaagaattt caccagtgca ctactggccc gtcattttct gatccagtag ccatcgcttt
     6901 gacctgccgc tttccgggca tataattacc gcttcatttt tttggcaggg ctttttagat
     6961 gttatttgca tggataaccg atcctaacgc ctggcttgcg ctcggtacgc tgacgctgct
     7021 ggagatcgtt cttgggatcg acaatattat tttcctttct ctggtggtgg caaagcttcc
     7081 cacagcacaa cgtgctcatg cgcgccgtct ggggttggcg ggagccatgg ttatgcgtct
     7141 ggcgctgctg gcatcaatcg cctgggttac gcgcctgaca aatccgcttt ttacaatatt
     7201 cagtcaggaa atttctgccc gtgatttgat tctgcttctg ggtggcttgt tccttatctg
     7261 gaaagccagc aaggaaatcc acgaatccat tgaaggtgaa gaagaagggc tgaaaacacg
     7321 cgtttcatca ttcctcggcg ctatcgtgca gattatgctg ctggatatta tctttagcct
     7381 cgactcggtg attacggctg tgggtctgtc agatcacctg tttattatga tggcagccgt
     7441 ggtgattgcc gtaggcgtga tgatgttcgc cgcgcgctcg attggtgatt ttgtcgaacg
     7501 ccatccttcg gtaaaaatgc tggcgctctc tttcctgatt ctggtgggct ttaccctgat
     7561 tctggaaagt ttcgacatcc acgtaccgaa aggttacatc tacttcgcga tgttcttctc
     7621 tattgcggtt gaaagcctca acttgattcg caacaaaaag aatccgctct gatactccgt
     7681 acgctctcct gcgggagggc gtactcactc cttttaccct cacagtttaa gattttcctg
     7741 ctttcaagat atataacgtc gttttataaa cagactatta tcataggtag gccaaatgag
     7801 gataaccgga tgaaaaaatg ggcagtaata atttctgcag tcggactggc gtttgctgtt
     7861 tccgggtgtt ccagtgatta cgtcatggcg accaaagatg gccgtatgat tttgaccgat
     7921 ggaaaacctg aaattgatga tgataccggg ctggtgagtt atcacgatca gcaaggtaac
     7981 gcgatgcaaa ttaaccgtga tgatgtttcg caaattattg aacgttaaca aataaggtca
     8041 gcatccggct ggccttaaga tttttctctt tcccttttcc cttccctctg ccatttttat
     8101 attccttatg tcgtgattat aaaaaggaaa cggctatgca atatcaccgt ataccccaca
     8161 gttcgctgga agtcagcacg ctggggcttg gcacgatgac gtttggtgaa cagaacagcg
     8221 aagccgacgc ccacgcacaa ctcgactatg ccgtcgctca gggcattaac cttatcgacg
     8281 ttgccgaaat gtacccagta cctccgcgcc ccgaaacgca agggttaacc gaaacctacg
     8341 tcggcaactg gctggcgaaa catggcagcc gcgaaaagtt aattatcgcc tccaaagtga
     8401 gcggaccgtc gcgcaataat gacaagggca tccgcccgga tcaggcgctg gatcggaaga
     8461 atatccgcga agcgctgcat gacagcctca agcgcctaca gactgattac ctcgatcttt
     8521 atcaggtgca ctggccgcag cgcccgacca actgcttcgg caaactcggt tatagctgga
     8581 cggattctgc gcctgcggtt tcgctgctgg atacgctgga cgcactggca gagtaccaac
     8641 gcgcgggaaa aattcgttat atcggcgtgt cgaacgaaac tgcatttggc gtaatgcgct
     8701 acctgcatct ggcggacaaa cacgatctgc cgagtattgt caccattcag aacccttaca
     8761 gtctgttaaa ccgcagtttt gaagtaggtc tggcagaagt cagccagtat gaaggggtcg
     8821 aactgctggc ctattcatgc ctgggtttcg gcacgctgac cgggaaatat ctcaatggtg
     8881 caaaaaccgc tggcgcacgt aatacgctct ttagtcggtt cacccgctat agcggtgagc
     8941 aaacgcaaaa agccgtcgcg gcgtatgttg atatcgccag acgtcatggc ctggaccctg
     9001 ctcagatggc gctcgcgttt gtacgccgtc aaccgtttgt tgccagcact ctgctgggcg
     9061 caaccacgat ggatcagctg aaaactaaca tcgaaagttt gcatctggag ttaagcgaag
     9121 acgtattagc tgaaattgaa gcggtgcatc aggtttatac ttatccggca ccataagatt
     9181 aacgccggtt aaaaccggcg ttaaatatta atgacggcgc tgccagatcc acagcgccgt
     9241 tattgccagc gcaaacagcg caccgaagcc aatgccaatg ggcacgaccg ggatgcctac
     9301 cattaccgcc agcgagtaaa tgcccagcat caacaacatg gcgctgtttt cgccaaggtt
     9361 ttgtactgca atcgcattcc ccgccccgac gcttttttta ccccgctcct gtagcaacgc
     9421 attgagcgga acgacaaaaa agccccccat cacgccaatc agcatcaaca aggcataggc
     9481 tggcagcagc tcgtgttgca gggaaaaaat cagtaccacc acgccaatca aaatcccggc
     9541 tggcatacag cgtgacacgg tttccagcgt aactaacttc gctgccgcac ctgcgccaac
     9601 cacgatacca atcgctacca tcgcgttgag ataggtgggc gtagagttat cggtaatgcc
     9661 cagcgccacc ggtacccaca gcaccaacag gaaacgcagc gtgacacccg ctccccagaa
     9721 taaactggtg cccaccagcg aaaaacgcgt ttcaccattg cgccatagcg aggtgcaggc
     9781 attcaggaaa ctgcgggtca tgttgatgag attccaagac tgccccggac gcgccgccgc
     9841 cagtttggga atgtagatat tggcaacgac cgcaccaccg taggccagtg cgcatgcggc
     9901 cagggcgacg aggacatgcc agtcagccag cacaccaccg gctacggaac cgagcaaaat
     9961 cgccgctatg gtagaagctt ccattaaacc gttagctttc actaacttac tacccgtggt
    10021 taattcgccg agaataccgt atttcgccgg tgaataggct gcagcaccaa cccccaccag
    10081 cgtatagccg agaaacggat tgataccaaa gcagatactg gctgcgccca gcagcttcag
    10141 gccgttggca aacatcatca cccggccttt ggcgaagcta tccgccacct gcccgacaaa
    10201 cggcgcaaaa agaatgtaag cacctacaaa caccatttgc aggatgggct ggctccactc
    10261 cggatagaac tgcgctttca gtaacgccag agtggcaaac agtagggcat tatcgccaaa
    10321 cgcagagaga aactgcgcca cgataaccgc tttcatcccc ttcgaccaca acgaagtgtt
    10381 agtgtgcact gactcactca tcgtgttgtt ccgcttcgtc tacccagctt ttcaacgtga
    10441 caaagtcagg tttgccgctg ccaagtaatg gcatctgttt cagatagcga atatcgcgcg
    10501 gtacagcaag ctccggcacg ccgtgctcgc gggcatactg ttgcaactta tcgagcgtca
    10561 gttcgttatc tgtggtgaaa agcaccagtg cctcgccttt gctggcatcg ctcttaatcg
    10621 cagtggcatg gactttatct ggcgaaacac caagtgccag ttgttccacc atttccagcg
    10681 acaccatttc gcctgcaatt ttggcaaagc gttttgcgcg gccctgaatc tgcacaaagc
    10741 cctgctcgtc aaaacgcaca atatcgccag tgtcatacca gccgcgctcc atttcgccgc
    10801 gaacattctc ggcggtgggc acttccagta cacctggctt ctccacccgc agatagccgt
    10861 tcattatgtt cggccctttc agttgcaggc gtccgccctc ttcgatacca ggaaccgaca
    10921 acagacgcgc atccattcct ggtagaatac gccctaccgt accgggtttc gccgccatcg
    10981 gtacgttgat agaaacgaca ggcgcgcact cggttacacc atagccttca aggatgcgca
    11041 ggccaaattt atcctgccaa agctgtttgg tactttcttg tagtttttct gcgcctgcca
    11101 ccacatagcg tagacgatag aagtcatacg ggttggcgaa acgcgcgtag tgaccgagga
    11161 aagtcgaggt accgaacaac acggtgcaac tgcggtcata caccaactcc ggcacaatgc
    11221 ggtaatgcag cgggcttgga taaaggaaca cttctgcacc tgtaagcagt ggcgtaaaca
    11281 ggcctaccgt cagcccaaag gagtgaaaca gcggtaatgc cgacataaag cgatcgttgg
    11341 tggtgaagtc ggcaatcgtt ttaatctgct cgacgttcgc cagaatgctt ttatggctat
    11401 ggacgacgcc ttttggatgg ccttcagaac cggaggtaaa gaggatcagc gcctcttctt
    11461 ccggctgctg ttttacctgc gccaggcgcg gcatcagcaa atgagcgaag atccatactt
    11521 tgtcggcagt ggtgacatct gcttttaaat cttccagata gacccagcgc acctgagtaa
    11581 gttgctccgg cagatgccag agtttgcctt tatcgagaaa ctggcgggaa gtgaagatgg
    11641 ttttgatttc agccgccgta atagcactgg tcagcccttt taccccagca gtgtagttca
    11701 tcattgcggg aatgcggcga cgcgcgatgg ccccaaaaat cactgccgca ctgatgcctg
    11761 cattgggcag cattaagccg atgcgttcgc cttcaacact gtatttttca aggatgcgtc
    11821 caacaaacag cgttttcgta agcaatttgc gataggagtc tggggtaaag ttgacgtctt
    11881 cgacacattt cttcccggct ccgaagcggt acattgcact cagtaaagat tcgtacagag
    11941 tttcacgcgg gcgcaccgcc atacgcgctt ccatcattat ttgatgcagc atttcgccag
    12001 cgattttgcg acggtcacgg gcacgcgacg catccggcat cgccacctgc gttggaggca
    12061 aaatatgcag agtaatttgc gggaacaagc gacgtttaac cagacctttc aggcggctga
    12121 agtgcgtaag ttccgcccct tcaatacgca caggaataac cgttgcacca gacttcgccg
    12181 cgacaaaacc cgcgccatcg tagattttca tcagcgagcc tgtagtggtg atgcgtcctt
    12241 cagggaaaat caccactggt cggccctgtt ccaccagacg taccagatgt ttaatagcca
    12301 taggttgcgt cgggtcgaga ggaacaaagt cgataaatga tttcagccaa cgcatatacc
    12361 actgttggct tattgaggtg taaacggcaa acactggacg cacaggtaaa aacagtccaa
    12421 gcaaaatgcc atcaataaaa gagacgtgat taggcgtaat tagaacgcgc tcgcccttca
    12481 gtgcctgggt gtcacccgta acgcgaacgc gatacaaaac acggcacaaa tttcgaaaaa
    12541 agctaaaaag cattccaact ccctttgctc tgattcagta aaagcgaatg gagggagatt
    12601 acacgagata aagaacgcga gcgacagtaa attaggtgcg aaaaaaaacc tgcgcatccg
    12661 cgcaggttgg tgcaagagac agggtacgaa gagcgtaccg aataatctca ccaatcaata
    12721 cctctgggat caccacttta gcaacctgaa gccaaacgcc accagcggtc aatcgcaaca
    12781 gcgtttcgca aagtgtaacc aaaggtttgc aatctctttt tttgtcttac ttatttgcgt
    12841 ttggctcaca ttcccacgat gaaaacacgc cactccttga accaacgggc gttttccgta
    12901 acactgaaag aatgtaagcg tttacccact aaggtatttt catggcgacc ataaaggatg
    12961 tagcccgact ggcaggcgtt tcagtcgcca ccgtttcccg cgtcattaat aattcaccca
    13021 aagccagcga agcttcccgg ctggctgtgc atagtgcaat ggagtctctt agctatcacc
    13081 cgaacgccaa cgcccgtgcg ctggcgcagc agaccactga aacggtcggt ctgatcgttg
    13141 gtgatgtttc cgatccgttt ttcggtgcaa tggtgaaagc ggtcgaacag gtggcttatc
    13201 acaccggtaa tttcttattg attggcaacg gttaccacaa cgaacaaaaa gagcgtcagg
    13261 ctattgagca actgatccgc catcgctgtg ctgcgttggt cgtccatgcc aaaatgatcc
    13321 cggatgccga tttagcctca ttaatgaaac aaatgcccgg tatggtgctg atcaaccgta
    13381 tcctgcctgg ctttgaaaac cgttgtattg ctcttgacga tcgttacggt gcctggctgg
    13441 caacgcgtca tttaattcag caaggtcata cccgcattgg ttatctgtgc tctaaccact
    13501 ctatttctga cgccgaagat cgtctgcaag ggtattacga tgcccttgct gaaagtggta
    13561 ttgcggccaa tgaccggctg gtgacatttg gcgaaccaga cgaaagcggc ggcgaacagg
    13621 caatgaccga gcttttggga cgaggaagaa atttcactgc ggtagcctgt tataacgatt
    13681 caatggcggc gggtgcgatg ggcgttctca atgataatgg tattgatgta ccgggtgaga
    13741 tttcgttaat tggctttgat gatgtgctgg tgtcacgcta tgtgcgtccg cgcctgacca
    13801 ccgtgcgtta cccaatcgtg acgatggcga cccaggctgc cgaactggct ttggcgctgg
    13861 cggataatcg ccctctcccg gaaatcacta atgtctttag tccgacgctg gtacgtcgtc
    13921 attcagtgtc aactccgtcg ctggaggcaa gtcatcatgc aaccagcgac taaccgcagt
    13981 taaagcaatt ccagcgccag taattcttcg atggtctggc gacggcgaat caaccgcgcc
    14041 tgaccattat caaacagaac ttctggtaac agcgaacggc tattgtagtt ggatgacatt
    14101 gatgcgccat atgcccctgt atcatgcagt accagataat cacctgcctt cacttccggc
    14161 aaggcgcggg tttcaacatt tcccccttcc tgctgggtaa agacatcgcc cgattcacat
    14221 aacggtccgg cgacgacggt ttccaccgtt ggcgcgtgtt ccagagaacg accatcagct
    14281 gccagggcac tgatatggtg gtaactaccg tacattgccg ggcgcatcag atcgttgaac
    14341 ccggcatcaa ccagcacaaa gtggcggctc cccatttgtt tgacgctccg cacctgagta
    14401 attaatacgc cagactgcgc taccaggaag cgacccggtt caatttccag tttcacaggg
    14461 tggcccaaat ggcgggcgat ttgctcacgc gcggcattcc acagaccata ataatgttcg
    14521 gtatcaaccg cctcttcacc ctgttgataa ggaacagaaa gcccaccgcc cgcagaaata
    14581 gcctgtaaat cctgaccgaa ttcgatgacc tgacgcacca tagcaccaca cacctgttcc
    14641 agatgggcat aatcaacgcc agaaccaatg tgcatgtgaa tgccgaccag ctgcagatga
    14701 tgacgttgta tcacgtccag tgcggcgggc agatcggtgt accagatacc gtgcttgctg
    14761 ttttcgccac cggtattggt tttttggcta tgtccgtgac caaaccccgg attaacgcgc
    14821 agccataccc gatgccctgg cgaaacctgg cccagttggt cgagcatatc aacagaaccc
    14881 gcattcaccg gaatttgcaa ttcactgacg cgttcaagcg tcgcctgatc gataacatct
    14941 gccgtaaaaa caatatcatc ggggtgcgtt tgcggattgt aacccgccgc caacgcacgc
    15001 tctatttcgc ctaacgagac ggaatccact ttcacgccct gctcacgcat taagcgcaaa
    15061 atatgaatat tggaacaggc tttctgtgca aagcgcacca catcaaactg tttcagcgct
    15121 gcaatctgcc gacgaataat ttgcgcatcg tagacccaca ccgggcagcc aaattcagcg
    15181 ggcaaacgca gcagattttc ggcggtgaga tcggtatcgg tgctgaacag tgaatgtggc
    15241 ataacaaact ccagataagt gcttttttat gattacgcca catcataaaa agaataaaaa
    15301 atatcgattt atgtcgagtc tatgcaaaaa tgatatggat taccggattg cgagagagcg
    15361 ctaatggccg ccgttaactt acgtcatatt gaaatttttc atgcggtaat gaccgccgga
    15421 agcctgactg aggcggcaca cctgctacac acctcacagc caaccgtcag ccgcgaactt
    15481 gcgcgctttg agaagatgat cgggctgaaa ttgtttgagc gcgtacgtgg gcgattacat
    15541 cctaccgtgc aaggactgcg tctgtttgaa gaagtgcaac gatcctggta cggactggat
    15601 cgaattgtca gcgctgcaga aagtctgcgc gagtttcgcc agggagaact gtctattgcc
    15661 tgcctgccgg tcttttcgca atctttttta ccgcagctcc tgcaaccctt tctggcacgt
    15721 tatcccgatg tcagcttaaa tatcgtgccc caggaatcac cgctacttga agagtggctc
    15781 tcggcccagc gtcatgattt aggactcact gagacactcc atacgcctgc gggaacagaa
    15841 cgtaccgaat tactctcttt agatgaagtg tgtgtgttac ctccgggtca tccgctggcg
    15901 gtaaaaaagg tattaacgcc ggatgatttt cagggtgaga actacatcag cctttcccgt
    15961 actgacagct atcgccagtt gctggatcag ctatttactg aacatcaggt taaacgacgc
    16021 atgatcgtag aaacccacag cgccgcgtca atctgcgcaa tggtacgggc gggggtaggt
    16081 gtttcggtgg ttaacccgct caccgcactg gattatgcgg caagcggttt agtggtgcgg
    16141 cggttcagta ttgcggttcc gttcacagtc agcctgatcc gccccctgca ccgcccgtca
    16201 tcagcgctgg tgcaggcatt tagtgagcat ttacaagcgg ggttaccgaa actggtcact
    16261 tctcttgacg ctattttgtc gtcagctacg acagcataaa agcgacagca tcctcggcat
    16321 ggatcgccgc agtatcaaac acaggcaaaa cactgcgctc ttctggcacc agtaaaccaa
    16381 tttctgtgca gccaaaaatg acgccctgtg cgccctgttc tgcaaggcga gcaatcactt
    16441 gcgcataata agcgcgtgac gcttcggtaa attgccccag acacagttct tcaaaaataa
    16501 tctgattaat tttcgcccgt tcatccgctt caggaataag acaattgatg gaaaattgtt
    16561 ccgtcagccg cccgcgataa aaatcctgtt ccatggtgta acgcgtaccc agcagcgcca
    16621 cacgagtcat tccggccccg gtaattgcac gtccggtggc atccgcaatg tgtaagaaag
    16681 gcagagtgca acgtgactca atggcatccg ccactttatg catcgtattg gtacataaca
    16741 caataccttc tgcgcccgcc cgctgtaagc caagcgccgc ctcagccaga atgtccccgg
    16801 ttttatccca ttccccgcga cgctggcact cttctatttc atgaaaatcg acgctatgta
    16861 gcagcacttg cgcagagtga agcccaccaa gccgctgttt aatgccttca tttatcaaac
    16921 gatagtaagg aatggtggat tcccagctca ttcctcccag caaaccaatt gttttcattc
    16981 ctctctcctg atgtgtgtta ccgcaacaag gctgaataag gaacgagaca aacgcctcaa
    17041 cggccaagtg cccaatctct attaacgaaa aaagggccgg atgtacagca catccggccc
    17101 gtgaaatcag atgccgatat ttctcaactt ctcgcctgcc atcagtttgc gttcgatatg
    17161 ttccagcgtg acatttttgg tttccggaat gagccagaaa gtgatgccca caaacgcaat
    17221 gttcagcgca gtgtagagcc agaacgtacc ggcagcgcca atgctgtcga gcagcgtcag
    17281 gaaggtcgcc gataatcata ttcgacaccc agttcgtggt ggtcgaacag gtaataccga
    17341 aatcgcggca tttcagcggc tgaatttcag agcacaggat ccacaccact ggcgcggcgc
    17401 tcatcgcata accggcaata cacatcatcg tcatgccaac agagagccag gacaatccac
    17461 tggaagccgt accgttatca aactgcatca ggcaatagcc cagcaccaga gtgcctaacg
    17521 ccatcacgct gaaaccaatt ttcagagccg gtttacccct gctttatcta ccgtaaacac
    17581 cgcaataaag gtggcgaaca taaaggtcag ccctacgacc agagtcgcaa tcatctgttg
    17641 ttctgtggtc gtaaagcccg ccattttgaa gatacgcggc gcgtagtaca tgatgatgtt
    17701 cataccggta aactgctgca tcgcctgcaa caacataccg agaaacacag cacgacggac
    17761 gttacggttg atcttaaaca gtgcccaacc gccctgtttt aacttcaggc tttcacgaat
    17821 ttcgttgagt tcttctcgcg ctttttccga cgtatcgcgc agcatacgca atacttcttc
    17881 cgcctcaata tgacgcccct tttccgccaa ccagcgcggg ctatttggca ggaagaccac
    17941 cagaataatc agcagaactg ctggtaaagc aagaaccccc aacattgcgc gccagttacc
    18001 gctataactg aacgctgtat cggataaaaa cgccagcacg atgccgagtg tgaccatcaa
    18061 ctggtacata ctgatcatct taccgcgaac gttttcactt gccatttcag aaagatacag
    18121 aggagcggtg taagacgcga tcccgacagc aatgcccagc cccacacgag cggcgattaa
    18181 catctctacg ctggtcgcaa aagcggaccc tatagaaccg agtacaaaca ggatggcccc
    18241 cgccatcagg ctgtatttac gccccaggcg gaacgacagc caaccattaa acagcgcacc
    18301 aattgctgcg ccgagcatca tgctactaac cacccattcc tgcaaatgac tggtcagcac
    18361 aaagtgatcg gtaatgaacg gcaacgctcc ggcgattacg ccgatatcaa gaccaaataa
    18421 caatcctgcg accgcagcag ctaccgaaac aaacatattc atacgccgcg tatcccgcaa
    18481 agaacgtggc gttaaagcag attccgtatt gatagtaacc attttttcct gccagcagag
    18541 agtaagacat agtgaaaaaa tacgtgaaca actcacgcag gtgtcaggtc ggaaacagca
    18601 taaatatgga ttaaattgct gcgacatgtc gttatgtgat ggatattcca attttcaaat
    18661 taagttgaat tattgagatt attattaacc acctaatttt acagcagata aaattcataa
    18721 agttcattaa ttgataatta atatggatta tttcataacc atgatatgga ttatgatgat
    18781 ctacaggtat aaaaaaccct gccatgcggc agggtcataa aagtaagaag aatgaattaa
    18841 cgcgccagcc aaccgccatc cacggcaatg gtataaccat tcacataatc tgaagcgctg
    18901 gaggcaagga acactatcgg ccccatcagg tcactcggca gtccccaacg accagctgga
    18961 atgcggtcga gaatttccgc gctacgttgt tcatctgccc gtagttgttg agtattgttg
    19021 gtcgccatgt aacccggagc tatcgcatta acattaatgt tgtgtttagc ccattcgttc
    19081 gccatcaatc gcgtcacacc catcacgccg ctttttgatg cggtataaga aggcacacgg
    19141 atcccgccct ggaaggagag cattgacgcg atattgataa tcttgccgcc attgccttgc
    19201 gcgataaagt gtttcgccgc tgcctgagac atgaagaata cgctcttgat attcaggttc
    19261 atgacatcgt cccagtcttt ttcgctgaac tcgagagcgt cttcgcggcg aatcaatccg
    19321 gcgttattca ccaggatatc aatatgacca aattcagcta ccgcgcgatc cagcagtcca
    19381 ggaatgccat caatctttcg cagatcggcg gtcaggctta aaaaacgacg ccccagcgcc
    19441 gtgacctgct cgatggtttc agtcggttca acgatgttaa tgccaacaat gtcacagccc
    19501 gcttgcgcca gccccaacgc catcccctgg cccagcccag tatcacaacc agtgacgacc
    19561 gcaactttac cttcgagaga aaatgcactt aaaatcataa caatacctta ttcgtttatg
    19621 cccacaacta gcgcaaatct ttaacggcca catggtccat atcatcaaag acctggtttt
    19681 caccaaccat gccccagata aaggtataag ctttggttcc gacgccggaa tggatcgacc
    19741 agctcgggga gatcaccgcc tgctcgttat gcatcacaat gtgacgcgtt tcttgcggtt
    19801 gccccatcat gtggaaaacg caggcgtcat catccatatt gaaatagaaa taaacttcca
    19861 tccggcgctc gtgggtgtga cacggcatgg tgttccacaa gttacctgga gccagctccg
    19921 tcagccccat actcaattgg caggtttcca gcacatccgg gacaaaatat ttgttaatag
    19981 tgcgacggtt actggtgagg ttatcgccta acgtgactgg agatacttcg tccggggtga
    20041 cttttttggt gggatacgtc gtatgcgcgg gtgcgcaatt gtaataaaac tttgccggag
    20101 tggcggtatc aatactggca aagacaactt cttttgcacc tttaccaaca tacagggcgt
    20161 cgcggtgacc gatttcatag cattggccat cgacagtaat cgtaccggca ccgccaatat
    20221 tgataacacc taactcgcga cgttcaagga aatagcttac gccgagttgt ttaccaactt
    20281 ccccgccaac ggaaaccgtt ttagttatcg gcataatgcc gccaacaata attcggtcaa
    20341 tgtggctgta aaccatggtg tactcatcgg cgacaaatac cttttcaacc aaaaattcat
    20401 tgtgcagccc ttgggtatcc agcgtttttg cgtgcgcact gtggatgctc tgtcttacgt
    20461 ccacatcaac ctccgataat cagtgaagcg tgaaaataga aaacgatagt gaaacactgt
    20521 ttcgttttct ctataaaggg atgatatgcc catgggctag ggttttcaat taaaaataaa
    20581 acaatgtttt atttttaagt taaggattaa aaaaagtgca gtgtcgatca cgaatatgtc
    20641 atgagaatgg aaaaatgagg gagcccagaa aatgtatgtc gacttgccag ccatcattat
    20701 tcaacagatt aatgacggca gatatttatc ggtaaggagg aaatgcagag ctactcgtca
    20761 cgttcaatgg tcaatgccac gccctggccc ccgccgatac aaagcgttgc cagccctttg
    20821 cgggcattac gtttcaccat ttcatgaacc agagaaacca ggattcggca accggaagcg
    20881 cctatcgggt gaccgagtgc gatcgcgcca ccattgacat tgacccgacg ctcatcccac
    20941 tcaagcatct tgccaaccga aagcgcctgt gcagcaaacg cttcattagc ctcgataaga
    21001 tcgacatcag ccaactgcca gcctacacgc tccaggcaac ggcgggtcgc atacaccggc
    21061 gcaattccca tcaatgccgg atctacacca acgctggcaa atgcgcggat gcgggccagc
    21121 acgggtaaat tcaacgctcg tgctttggct tcgctcatca tcattaccgc agctgcgcca
    21181 tcgtttatgg atgatgcatt ccccgcggtc acagaaccga gactatcaaa tgaaggattt
    21241 aaacgggcta aaccttctgc actggcgtca gtgcatggct gttcatcggt atcaacaacc
    21301 aacgtctgac cgttactttg gatcattacc gggacgatct catctttaaa tcgtccggcg
    21361 tcaatcgccg ctcgcgcttt ttgttgcgag ctaagtgcgt aagcatcctg caactgacgg
    21421 ctgatgccat attcgcgagc cagattttcg gcggtgacac caatatgata atcattgaag
    21481 gcatcccaca acccatcatg caccagactg tcaaccaact ggctattgcc aagctgtgca
    21541 ccggtgcggc tatcagtcag aacatgtggt gcgcggctca tgttttcctg gccaccggcg
    21601 atgacaatat cagcctcgcc acactgtatc gcctgagtag ccagatgcag tgctttaagc
    21661 ccagaaccgc aaacgtcatt aatagtgatt gcagaaacgc tattaggaag accaccttta
    21721 atagccgatt gccttgccgg attctgccct gcccctgcag tcaacacctg accaagaatt
    21781 acttcatcca ccgcatatgc aggaacgccg gtacgttcta ttaacgcttt cacgaccaaa
    21841 ctaccaagtt ccacggcgga atgacccgct aacgcaccac gaaagcagcc gataggtgtc
    21901 cgtaacgccc cgacaatcac aacgtctttc atcacaacct cgcaccaatt aacagtgcaa
    21961 tagtaaatga ttgttaatta cagttatctt aattgtttaa aaaaagtgat ttttatcaca
    22021 aaagaaatat gcctgagcag cagtcagaga cataactggc acgtaaggtt tgcaaccact
    22081 aacccaccaa tagaggggta gatagggcgt taatctccca tacttaacct ggtttatggt
    22141 aaattgccct ccattttgtt taatttgtag atgatacgtt cagataatgt ctaatatttg
    22201 gtctaaagaa gaaactctgt ggagtttcgc gctctacggc acagccgttg gtgcaggcac
    22261 gctcttcctt cctattcagt taggttcggc aggggctgtg gtcctgttta ttactgctct
    22321 ggtcgcctgg cctttaacat attggccaca taaagcttta tgccagttca tcctctcatc
    22381 gaaaacatca gcaggtgaag ggataacggg cgcggtaaca cactactatg gcaagaagat
    22441 tggtaatctg attaccacgc tgtacttcat cgcctttttt gtcgtcgtgt tgatatatgc
    22501 agtggcaatt accaactcac ttacagaaca gctggcaaag catatggtta ttgatcttcg
    22561 catccgtatg ttggtgagtc tgggtgggta atgactccaa cttactgata gtgttttatg
    22621 ttcagataat gcccgatgac cttgtcatgc ag
//
LOCUS       DAJVUK010000059        22466 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.059, whole genome shotgun sequence.
ACCESSION   DAJVUK010000059 DAJVUK010000000
VERSION     DAJVUK010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22466
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.059"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            52..243
                     /locus_tag="OQQ57_002063"
     CDS             52..243
                     /locus_tag="OQQ57_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1956833.1"
                     /translation="MKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGD
                     DDALKEILTHVTEATKKQH"
     gene            212..1318
                     /locus_tag="OQQ57_002064"
     CDS             212..1318
                     /locus_tag="OQQ57_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /protein_id="HCS1956834.1"
                     /translation="MSPRPRKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTD
                     KGKAEKIASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRLKN
                     GDIAATTHKEKTRMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMVSTARVNRGLW
                     VDIYKEAQHAGEVPPGWNPPEATRKPIPKVTRARLTMEDWQKIYNATPEKHFIRNAML
                     LAIVTGQRRDDICHMRFSDVWNEHLHITQGKTGMRLALPLTLRCDAIGITLKEVIDGC
                     RDRILSPYLIHSRHQKQPKPMSKDNLSDYFAKARDLAGIIPPAGKTPPTFHEQRSLSE
                     RLYRAQGIDTKTLLGHKVQATTDRYNDTRGQEWV"
     gene            1498..2292
                     /gene="potC"
                     /locus_tag="OQQ57_002065"
     CDS             1498..2292
                     /gene="potC"
                     /locus_tag="OQQ57_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HCS1956835.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMISPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            2289..3335
                     /gene="potD"
                     /locus_tag="OQQ57_002066"
     CDS             2289..3335
                     /gene="potD"
                     /locus_tag="OQQ57_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HCS1956836.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETCIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            complement(3491..4312)
                     /gene="cobB"
                     /locus_tag="OQQ57_002067"
     CDS             complement(3491..4312)
                     /gene="cobB"
                     /locus_tag="OQQ57_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HCS1956837.1"
                     /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     KIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(4328..5239)
                     /gene="nagK"
                     /locus_tag="OQQ57_002068"
     CDS             complement(4328..5239)
                     /gene="nagK"
                     /locus_tag="OQQ57_002068"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HCS1956838.1"
                     /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
                     ELVAEADQRFGCRGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL
                     PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQQLQAPEIIALYNQG
                     DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV
                     ARVPRIERARHGDAGGMRGAAFLHLTD"
     gene            complement(5268..6512)
                     /gene="lolE"
                     /locus_tag="OQQ57_002069"
     CDS             complement(5268..6512)
                     /gene="lolE"
                     /locus_tag="OQQ57_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HCS1956839.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEMTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     LIIGVVVSLQLTPIIERIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(6512..7213)
                     /gene="lolD"
                     /locus_tag="OQQ57_002070"
     CDS             complement(6512..7213)
                     /gene="lolD"
                     /locus_tag="OQQ57_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309522.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HCS1956840.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(7206..8405)
                     /gene="lolC"
                     /locus_tag="OQQ57_002071"
     CDS             complement(7206..8405)
                     /gene="lolC"
                     /locus_tag="OQQ57_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HCS1956841.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSINPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRMMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEDSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMIFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPMAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            8667..9740
                     /locus_tag="OQQ57_002072"
     CDS             8667..9740
                     /locus_tag="OQQ57_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HCS1956842.1"
                     /translation="MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFPHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
                     LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
                     SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR
                     RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN
                     TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL
                     SQRAFSDLLFSPPSLPAAVSYSR"
     gene            9868..13314
                     /gene="mfd"
                     /locus_tag="OQQ57_002073"
     CDS             9868..13314
                     /gene="mfd"
                     /locus_tag="OQQ57_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HCS1956843.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTKHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            13458..14420
                     /gene="ldtC"
                     /locus_tag="OQQ57_002074"
     CDS             13458..14420
                     /gene="ldtC"
                     /locus_tag="OQQ57_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
                     /protein_id="HCS1956844.1"
                     /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN
                     KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
                     GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
                     TRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
                     RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
                     TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
     gene            complement(14503..14760)
                     /gene="bhsA"
                     /locus_tag="OQQ57_002075"
     CDS             complement(14503..14760)
                     /gene="bhsA"
                     /locus_tag="OQQ57_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
                     /protein_id="HCS1956845.1"
                     /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAG
                     TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK"
     gene            15001..15633
                     /gene="comR"
                     /locus_tag="OQQ57_002076"
     CDS             15001..15633
                     /gene="comR"
                     /locus_tag="OQQ57_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HCS1956846.1"
                     /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(15695..16234)
                     /locus_tag="OQQ57_002077"
     CDS             complement(15695..16234)
                     /locus_tag="OQQ57_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HCS1956847.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(16461..17765)
                     /gene="ndh"
                     /locus_tag="OQQ57_002078"
     CDS             complement(16461..17765)
                     /gene="ndh"
                     /locus_tag="OQQ57_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017384716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone dehydrogenase"
                     /protein_id="HCS1956848.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTHDPDIYAIGDCASCTRPEGGFVPPRAQAA
                     HQMATCAMNNILAQINGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(18165..18707)
                     /locus_tag="OQQ57_002079"
     CDS             complement(18165..18707)
                     /locus_tag="OQQ57_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1956849.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(18730..19755)
                     /gene="nagZ"
                     /locus_tag="OQQ57_002080"
     CDS             complement(18730..19755)
                     /gene="nagZ"
                     /locus_tag="OQQ57_002080"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HCS1956850.1"
                     /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPEKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPAHVIYSD
                     VDPRPASGSSYWLKTVLRQELCFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKASSTRLNQLHERW
                     QEEKAGH"
     gene            complement(19766..20590)
                     /gene="thiK"
                     /locus_tag="OQQ57_002081"
     CDS             complement(19766..20590)
                     /gene="thiK"
                     /locus_tag="OQQ57_002081"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HCS1956851.1"
                     /translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
                     TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDTALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(20574..21212)
                     /gene="lpoB"
                     /locus_tag="OQQ57_002082"
     CDS             complement(20574..21212)
                     /gene="lpoB"
                     /locus_tag="OQQ57_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HCS1956852.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDRTAPPAPHIRHYDWNGAMQPIVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQ"
     gene            complement(21226..21603)
                     /locus_tag="OQQ57_002083"
     CDS             complement(21226..21603)
                     /locus_tag="OQQ57_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HCS1956853.1"
                     /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQKPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(21606..21965)
                     /gene="hinT"
                     /locus_tag="OQQ57_002084"
     CDS             complement(21606..21965)
                     /gene="hinT"
                     /locus_tag="OQQ57_002084"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HCS1956854.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVVAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
BASE COUNT         5601 a         5899 c         5574 g         5392 t
ORIGIN      
        1 gacgagtgga aaccaaaacg gttcagtctc ccaataacaa acactaccct ggtgaaatac
       61 ggaaaactag gatacatcgt tccaagacca caaaaaattc gtgggcgttg gctgatagat
      121 cgccgagcag tatttgttgg gccaggtgaa acgggaattg cgccggaaat tcatactggc
      181 gatgatgatg cactgaagga gattttaact catgtcaccg aggccacgaa aaaacagcac
      241 tgacgtagcc ggtctttacg aaaagtttga tcgcagaact ggcagagttt actaccagta
      301 taaaaatcct gtgactggaa aatttcacgg actcggaaca gacaaaggta aggcagaaaa
      361 aatcgcttcc acagccaatc agcgaatagc tgcagcagaa gctgaatatt tcatgcgcaa
      421 aattgatgaa agtccgtcag caacaaaacg tcggggtatc agattaaagg catgggttga
      481 tcgatatctg aaaatacagg acacgcgact gaaaaatgga gatattgcag ctacaactca
      541 caaagaaaaa actcgaatgg ctgcatacct ggtttcccgt ctgggaaacc acccattgaa
      601 agaactggaa gtaagagact ttgcattaat actggatgag tggctggata aagacatggt
      661 cagcacagcg agagtaaatc gtggattatg ggttgatatt tataaagaag cacagcatgc
      721 aggggaagtt cctcctggat ggaatcctcc ggaggctacc cgtaaaccga tccctaaagt
      781 aaccagagcc aggctcacca tggaagactg gcaaaaaatt tacaatgcaa cgcctgaaaa
      841 acactttatc cgtaacgcaa tgcttcttgc gattgttact ggtcagcgcc gtgatgacat
      901 ttgccacatg cgtttttcag atgtgtggaa cgaacacttg catatcaccc agggaaaaac
      961 cggaatgcgt ctggcgttac cgcttacact acgctgtgat gccattggga taacgttaaa
     1021 agaagttatt gatgggtgcc gagacagaat attaagtcca tatctaatcc atagtcggca
     1081 ccagaaacaa ccgaagccga tgagtaaaga caacctgagc gactactttg ccaaagcacg
     1141 ggatctggct gggataattc caccagcagg aaaaactccg ccaacatttc atgaacaacg
     1201 ctctctatca gaacggctgt accgtgcaca gggtatcgat acaaaaacat tactaggaca
     1261 taaagtccag gcaaccaccg atcgctataa cgatactcga ggtcaggaat gggtttaagc
     1321 tggttatttg acaaacacca tatggaatat ccgtcaccat ctcaggaaaa aagtgttgta
     1381 aaatgcgtgg cctagttttg gggaaacgtt ttggagagat tttggagaaa ggaaaaaatt
     1441 gaataaattc aaaatcctga aagtgctcca ccttatgaat aagaaggtgg aactcgaatg
     1501 atcggtcgac tgcttcgcgg cggttttatg accgctatct acgcgtacct gtatatccca
     1561 atcattattt tgattgtgaa ctcctttaac agctcgcgct ttggcatcaa ctggcagggt
     1621 tttaccacca aatggtatag cctgctgatg aacaacgaca gcctgttaca ggcagcgcag
     1681 cattcactaa caatggcggt gttttcggcg acgtttgcta cgcttatcgg ttcactgacg
     1741 gcagttgcgc tgtaccgtta tcgctttcgc ggtaagccgt tcgttagcgg aatgctgttt
     1801 gtggtaatga tatcaccaga tatcgtgatg gcaatttcgc tgctggtgct gtttatgctg
     1861 ctgggtattc agcttggctt ctggtcgctg ctgttctcgc atatcacctt ctgcctgcca
     1921 tttgtggtgg tgacggtgta ttcgcgcctg aaaggttttg acgtgcggat gctggaagcg
     1981 gcgaaagatc tcggtgccag cgaatttaca attctgcgaa aaatcatact gccactggca
     2041 atgccagcgg tggcagcggg ctgggtgtta agctttaccc tgtcgatgga cgatgtggta
     2101 gtttcttcgt tcgtcaccgg accaagttat gaaattctgc cgttaaaaat ttattcgatg
     2161 gtcaaagtcg gcgtatcgcc ggaagttaac gcgctggcaa ccatattact ggtgctgtcg
     2221 ctggtgatgg ttattgccag tcagcttatt gctcgtgata aaacgaaagg taacacaggg
     2281 gacgttaaat gaaaaaatgg tcacgccacc tgctcgcggc gggtgctctg gcactgggca
     2341 tgagcgccgc tcacgccgat gacaacaaca cgctgtattt ctacaactgg accgagtacg
     2401 tgccgccagg actgcttgaa cagttcacca aagaaacctg tattaaggtt atctattcga
     2461 cttacgagtc gaacgaaacc atgtacgcca agctgaaaac gtacaaagac ggtgcgtatg
     2521 acctggtggt tccttcaacc tattacgtcg ataaaatgcg taaagaaggg atgatccaga
     2581 agatcgacaa gtcgaagtta acgaacttca gcaatctcga tccagacatg ctcaacaagc
     2641 cttttgaccc gaataacgac tactccattc cgtatatctg gggggcgacg gcgattggtg
     2701 ttaacggtga tgcggtggat ccgaaatctg tcaccagctg ggccgatctg tggaagccag
     2761 agtacaaagg cagcctgctg ttgaccgacg atgcccgtga agtgttccag atggcgctgc
     2821 gtaagctggg ctattccggt aacaccaccg atccgaaaga gattgaagct gcatataacg
     2881 agctgaaaaa actgatgcca aacgtcgcag cgtttaactc cgataacccg gctaacccgt
     2941 acatggaagg cgaagttaac ctcggcatga tctggaacgg ttctgctttc gttgcacgcc
     3001 aggcgggtac gcctattgac gtggtgtggc cgaaagaagg cggcatattc tggatggaca
     3061 gcctggcgat cccggcaaat gccaaaaaca aagaaggcgc gctgaaattg atcaacttcc
     3121 tgctgcgccc ggatgtggca aaacaggttg ctgaaactat cggttatcca acgccaaacc
     3181 ttgcggcgcg taagctgtta agtccagaag tggcgaacga taaaacgctc tacccggatg
     3241 ctgaaaccat taaaaatggc gaatggcaga atgacgttgg cgcagccagc agcatttatg
     3301 aagagtatta tcagaagctg aaagcaggac gttaattcag caagcgggcg gtggtattac
     3361 cgcccgtttt ttatttagca aggatgtggc taatgagtca ggacagtaga gttttatccg
     3421 actctttcgt cggtattgtg gtccgctcgt aggcctgata agcgtagcgc atcaggcaat
     3481 gcttcctgct ttataatccc ttcagcaact tttcaacaaa ctcaggcacc acctggcttg
     3541 ccgggccgta atatttctcg gcaaattcat taccgacctg acttggttcg agattcagtt
     3601 ccacggtgtg cgcgccatgc agtttcgctt cgtgaacaaa cccagccgcc ggataaacat
     3661 gcccggaagt accaatggca atgaaaatat cagccatcga caacgccata taaatttcat
     3721 ccatgccgag tggcatttcg ccaaaccaaa cgacgtgcgg gcgcaagggt gccgggaact
     3781 ggcaacaatg gcatttatct tctggcgtaa cgtctccggt ccagtcgaga acctgaccac
     3841 tttgcgaaca acgaactttc agcaattccc catgcatatg aatgacattg gtattacctg
     3901 cgcgttcatg caggttgtct atattctgcg ttaccagcaa aaagcgatcg ccgagagcgt
     3961 cttgcagttt agccagcgca agatgcgcgg cgttaggctg aatttttggc tgctgcagct
     4021 gtcgacgacg ggcgttataa aacgcttgca ccagttcagg atcgcgatcg aaaccttccg
     4081 gcgttgccac atcttcaacc cgatgttctt cccacaggcc atctgcggcg cgaaaggtac
     4141 gaatacctga ttccgcagaa attcctgccc ctgtcagtac gagtactctt ggtttttcca
     4201 ttgcttccgg caccacttta tctctgaaaa aaatacgctg acgcaaacgc tcgcgcaggc
     4261 ggcgtttatt tttacgaaaa cgacttaacc gatgaccccg acgcgacagc atagcaacct
     4321 ctgttgttta atcggttaga tgtaggaagg ccgcaccacg cattcctccc gcatcaccgt
     4381 ggcgcgcgcg ttcaatgcgc ggaacacgag ctacaggtaa gagatgacga ggcagcctgt
     4441 ccgccagttg cgttgtgatt gccgggaaat tcgataagcc accaccaatg acgaccaggt
     4501 cagggtcaac aatggtcagg atatttccca gacaaaccgc taataaatcc agataacgct
     4561 caacgtgcgc ccttgcctgc tcatcgcctt gattataaag cgcaataatt tcgggagcct
     4621 gcaactgttg atgataatag tgttgataca gccacgcaaa accgcgacca gacagataat
     4681 tctcaatgca gccatgctga ccacagccgc agcggcgtaa cgggaaatcc aaccccatca
     4741 tggttaacgc atcaaccggc agacgcatat ggccaaactc gccggtaatg tagcttttac
     4801 cggtaatcgg tttgccgttg aaaatcagcc caccgccaac gccggtacca agaatcaacc
     4861 ccatcaccag tggatattgc gtaaattcat catcccaggc ttctgaaagg gcaaaacagt
     4921 tggcatcgtt atcaaggcgt acatcgcgat caagacgtgc gctcaggtcg gcacgcagcg
     4981 gtttaccgct ggcagcgggg acattggcgg catacagcgt accatcttct gtttccggca
     5041 ttcccggtat accaatgccg acagaacctc tacagccaaa acgttgatca gcttcggcta
     5101 ccagctcgca cactgcatct aaaaatgcgt catagctgtc acgcggtgtc ggcacccgct
     5161 tttcccactg caactgccga ccgctatcaa acacgccaag cgcaattttt gttccaccaa
     5221 tatcaaaccc gtaatacatt gccgctcctt gttttaatgt actgccttta ctggccgcta
     5281 aggactcgcg cagggtcaat attactggcg cgccgcgccg gataccaact tgccaaaaga
     5341 ctcagcaaca atgctgtgac cagtacgtag aagacgtcca gccagtgcaa ttccgatggc
     5401 aggaagtcaa taaaatagat atcgctggag aggaactgat gaccgatcag cttttcaatc
     5461 cgctcaataa tcggggtaag ttgcagtgaa acaactacgc cgataatcag cccacacagg
     5521 ctgccgaaca gccctgccag caatccatac cagacaaaga tggcgcgaat taaaccatct
     5581 ttcgccccca gcgttcttaa tactgcgata tcgccactct tatctttcac cgccatcact
     5641 aaggtggaga cgatgttgaa acaggccacg ccaatcacca gtaccatcgc cagatacata
     5701 atggcgcgga tcatctggat atcgcgatac atatagccgt aagtaccaat ccagctttta
     5761 atataaacat agctgttggt catttcaccc gcatcgcgta ccagcttatt ggcgttgaaa
     5821 acatccgtca ttttaagggc aatacctgac acgctggaac ccatatcaag atattgttgg
     5881 gcatccgcca gcgggatcat ggcaaaactg tgatcgagtt ggccactcaa ctgcaaaata
     5941 cccgcaacgt gcaaacgcac acgttttggc tgcatcagtt tatgctcagg attcgagttg
     6001 gggatcatga tcgacaccca atcgccctgc ttcactttca gcgcatccgc cacgcctttg
     6061 ccgatgataa tttgctgttc gcccgcttta aaattgcgcc acgcatcccc ctgaacaaac
     6121 gagggtaatg cgctcagacg ctgttcctgt tgtgggttaa cgcccttcac ctggattgcg
     6181 cgcagattcg ctccactttc caccagcccg gtgaaattga tatacggcgc agcggcggca
     6241 atacccggca ctttctgcac tttatccagt gcttcctgcc agttagtcca tggctgattt
     6301 accgcttcga tttcaccatg cggcaccacc gccagaatgc ggttattcag ttcgcgttca
     6361 aagccgttca tcgcgcttaa gccgacgatc aataccgcca caccgagggc aatgccaatg
     6421 gtagaaatga cggagatcag cgacaccatg ccgccgcgcc gccgtccgcg actaaaacgc
     6481 aggccaatta ataacgataa aggcatcgcc attactccgc ccccatcagg ctcagttccg
     6541 ccgtcagacg tccatcacgc atttctaact ggcggctcat acgtttcgcc agttgcaggt
     6601 cgtgagtaac caccaggaag gcggtgccct gcaagcgatt caattcccca agcaactgga
     6661 agatgctgtc ggcgttacgc gcatcgaggt taccggtagg ctcatccgcc agtaccagac
     6721 gcggattatt gaccagcgca cgggcaatcg ctacacgctg gcgttcgccg ccagaaagtt
     6781 cagatgggcg gtgattcgca cgatgctcca gccccaccgc ttttaacatc tccagtgcac
     6841 ggctgttgat ttcagcgggc tttttcttgc caatcagcag cggcatagcc acgttttcca
     6901 gggcggtaaa atccggcagc aggtggtgaa actgataaat aaagcccagt ttctggttgc
     6961 gcagttctgc ttttgctgcc gacgacagtt tgctcatcgg ttgaccgtta aagatcacat
     7021 cgccggaggt tggcgtatcc agtccgccca gcaggtgcag caaggtgctt ttaccggaac
     7081 cagagctacc gacgatcgcc atcatttcac cttcgccgac gctgaaactg acattgtgca
     7141 gtacatcggt ttgcacactg ccttcctgat agcgtttgca caggttgtcg cattgcaaca
     7201 ggatcttatt cataacgtaa agcctcagcg ggttgtgtgg cggcagcgcg ccatgaaggg
     7261 taaagcgtag acagcagcgc gatagccatc gccaccagcg caataacaat gacctgtaaa
     7321 ggttcgatag ccatcggcag cgccgcgcca tcaagcagga cgccgattat tggcatcaga
     7381 ttatttaact ggctggcaag cagtgcgcca agcgccgctc cgaggatcgc accgataatc
     7441 ccggcgctgg ccccttgcac cataaagatc atcatgattt gtcgcggagt taagccttgc
     7501 gtttgcagga tcgctacttc gccctgcttc tccatcacca tcagccccag cgaggtaata
     7561 atgttaaacg ccgcaacggc gacaatcagg ctcagcagta aacccatcat atttttttcc
     7621 atgcgtacgg cctggaacaa ctcgccttta cgatcacgcc agtcctgcca tttgctgtct
     7681 tcaggcagtt tttgctgact taatgagtcg actttcagcg gctcatccag ccacaaacgc
     7741 cagccggtaa tattgcctgc cggataacgc atcagacgcg aggcatcctc aatattcacc
     7801 agcatttcat tgccatcgac ttcactgttg gcggcgaaag tgccaatcac attgaacagg
     7861 cgctgacttg gaatacgccc catcggcgtg aactggctgg cagatggtac catcatgcgg
     7921 atttgatcac cgcgattaac gcctagctgt gaggcaagtt gttcgccgag gatgacatta
     7981 tatttccccg gctcgaggtc agtttgtttc acattgacca gatacggcgt tagtggatct
     8041 ttttgcgccg gatcgatacc cagcatcacc ccgaccgcca cgctgcgcgc gctttgcagt
     8101 accacatcac cggtagtaat aggtgcgacg cgattaacgc cgtccagttt gactgccgtt
     8161 tccgggagtt gctgcgggtt aatagagcca tgctcagaag agagaattgc ctgtggcatc
     8221 aggccaagga tgttgttttg cagctcgcgc tcaaagccgt tcatcactga caatactgtg
     8281 accagcgcca tcaccccgag ggtaatgccg atggtagaaa gccaggagac gaaacgaccg
     8341 aagcgatccg ctgcacgccc acgcatgtaa cgcaggccaa taaatagagc gacaggttgg
     8401 tacatgaaat ccgtctggtt gctgtagcaa agacacgagt atataagcga aagcaagatg
     8461 ggtaaacgtc tgaactgtaa gtgatcgtca gggctaatct gaaaagcccc cgtaaatcaa
     8521 tcggctaaat tgccatgttt tatcatcaat cttgccgcct gatcttaatc tgaaaaatca
     8581 tccaatacag acagataccc attacacctc gggtcataac ccgcaggatc aaccgcatgt
     8641 aaattaaaaa agagcgtgtt gtcctgatga aacaaaaaga gctatggatt aaccagatca
     8701 aagggttatg tatttgtccg gtggtgattt atcactcggt cattaccttt tatccgcata
     8761 tgaccacttt tccgcatccg ttatcggaag tcctgagcaa atgctggatc tatttcaatc
     8821 tttaccttgc accctttcgt atgccggttt ttttctttat atccggctat ttgattcgcc
     8881 gctatatcga cagcgtaccg tggggaaatt gtctcgataa acggatctgg aacatcttct
     8941 gggtgctggc gctttggggc gtggtgcagt ggctggcgtt aagtgcgctg aaccagtggc
     9001 tggcacctga gcgcgattta agcaatgcct ccaatgccgc ttatgccgat tccaccggtg
     9061 agttcctgca cgggatgatc accgccagca ccagcttgtg gtatctgtat gcgttaattg
     9121 tctatttcgt ggtatgtaaa atttttagcc gtctggcgct gccactattc gccttgtttg
     9181 tactgctgag tgtggcggtt aatttcgttc ccacgccgtg gtggggaatg aacagtgtga
     9241 tccgcaattt gccttattac agccttggcg catggtttgg cgcaacaata atgacctgtg
     9301 ttaaagaggt accgttgcgc cgccatctgc tgatggcttc tttgcttacc gttctggcgg
     9361 tcggtgcctg gttgtttact atctcgctgc tgttgtcgct ggtatcgatt gtggtgatca
     9421 tgaagctgtt ttatcagtac gagcaacgat tcggtatgcg ctccaccagc ctgctgaatg
     9481 tgattggctc caacaccatt gctatctaca ccacccatcg cattctggtt gaaatattca
     9541 gcttaactct gcttgcgcaa atgaacgcag cacgctggtc gccgcaagtc gaactgacac
     9601 tcctgctggt ttatcccttt gtcagtttgt tcatctgtac tgttgcgggc ttgctggtaa
     9661 gaaaactttc acagcgtgca ttcagcgatc tgttgttctc cccgccttca ctgcccgctg
     9721 ccgtcagtta ctcccgctaa gccatcgccc cagccggggc gattcaattt gctaaaccat
     9781 gtcgattacg gataatgaac agcattgctt atcagagata tgcccccata tgttgaggca
     9841 tatcctaacg agaatctgac aaccgttatg cctgaacaat atcgttatac gctgcccgtc
     9901 aaagcgggtg agcagcgtct gctgggcgag ttaaccggcg cagcctgtgc aacgctggta
     9961 gcggaaattg ccgaacgtca cgccggtccg gtggtactca ttgcaccaga tatgcaaaat
    10021 gctctgcgtt tgcatgatga aatcagtcag ttcaccgatc agatggtgat gaatctggcg
    10081 gactgggaaa ctcttcccta cgacagcttt tcgcctcatc aggacattat ctcctcgcgc
    10141 ctttccaccc tttaccagct accgacgatg cagcgtggcg tactgattgt tccggtgaat
    10201 acgcttatgc agcgcgtttg cccacacagt tttctccacg gtcatgcgct ggtgatgaaa
    10261 aaaggtcagc gcctgtcacg agatgcatta cgaacccaac tggacagcgc cggttatcgc
    10321 catgttgacc aggtgatgga gcacggcgaa tacgccacgc gcggcgcgtt gctggatctc
    10381 ttcccgatgg ggagtgagct gccttatcgt cttgatttct ttgatgatga aatcgacagc
    10441 ctgcgggtgt ttgacgtcga cagccagcgc acgctggagg aagtagaagc gatcaatctg
    10501 ctgcccgcgc acgaatttcc gaccgataaa gcggcaattg aactgttccg cagccagtgg
    10561 cgcgatacct tcgaagtgaa gcgcgatccg gaacatattt accagcaagt gagtaaaggc
    10621 acattacctg ccgggatcga gtactggcag ccattgttct tcagcgaacc actgccgccg
    10681 ctgttcagtt atttccctgc caataccttg ctcgtgaata ctggcgatct ggaaaccagt
    10741 gccgaacgtt tccaggctga cacgctggcg cgttttgaga atcgcggcgt cgatccgatg
    10801 cgcccgctgt tgccaccaca atcgctctgg ctgcgggtgg acgagctctt ctcagagctg
    10861 aaaaactggc cccgggtgca gctaaaaact aaacatttac cgacaaaagc cgcgaatgcc
    10921 aatttaggtt tccagaaact gccagaccta gccgttcagg cgcaacaaaa agcgccgctg
    10981 gatgcgctgc gtaagttcct cgagactttc gacggtccgg tggtgttctc ggtagaaagt
    11041 gaaggtcgcc gtgaagcgct gggtgaactg ctcgcacgaa ttaaaattgc tccgcaacgc
    11101 attatgcgtc ttgatgaagc cagcgaccgt gggcgttatc tgatgattgg cgctgccgaa
    11161 catggttttg tcgataaggt gcgtaatctg gcgctgatct gcgaaagcga tctgctcggt
    11221 gaacgtgttg cccgccgtcg tcaggattct cgccgcacca tcaaccccga tacactgatc
    11281 cgtaaccttg cggagctgca tattggtcag ccggtggtcc atctggagca cggtgtcggg
    11341 cgctatgccg gaatgaccac gctcgaagcg ggcggcatta ctggcgagta tttgatgctc
    11401 acctatgcca acgacgccaa actgtatgtt ccggtgtcgt cactgcatct gattagccgt
    11461 tacgcaggtg gcgcggaaga aaacgccccg ctgcataaac ttggcggcga tgcgtggtca
    11521 cgcgcgcggc agaaagcggc ggaaaaagtg cgtgatgtgg cggcggaatt gctggatatc
    11581 tacgcgcaac gcgccgccaa agagggcttc gcgtttaaac acgatcgtga gcagtatcag
    11641 ttgttctgcg acagcttccc gtttgaaacc acgccggatc aggcgcaggc cattaatgcg
    11701 gtacttagcg acatgtgtca gccgctggca atggatcgtc tggtgtgcgg cgatgttggc
    11761 tttggtaaaa cagaagtggc gatgcgcgcc gctttcctgg cagtagataa ccacaagcag
    11821 gtggcggtgt tggtgcctac cacccttctc gcgcagcagc attacgacaa cttccgcgac
    11881 cgtttcgcca actggccggt acgtatcgaa atgatctccc gtttccgcag cgccaaagag
    11941 cagacgcaaa tccttgcgga agtggcggaa gggaaaatcg atattctgat cggtacgcac
    12001 aaactgctgc aaagtgacgt caagtttaaa gatttaggcc tgctgattgt cgatgaagaa
    12061 caccgcttcg gggtgcgtca taaagagcgc attaaagcga tgcgcgcgaa cgtggatatt
    12121 ctgacgctta ctgcaacgcc gatcccacgc acgctgaata tggcaatgag cggaatgcgt
    12181 gacctgtcga ttatcgccac gccgcccgcc cgtcgtctgg cagttaaaac ctttgtccgt
    12241 gagtatgaca gcctggtggt ccgggaggcg atcctgcgtg aaattttgcg cggggggcag
    12301 gtttattatc tctacaatga tgtggaaaac atccagaaag ctgccgaacg gctggcagaa
    12361 ctggtgccag aagcgcggat cgccatcggt cacgggcaga tgcgcgagcg cgaactggaa
    12421 cgggtgatga atgatttcca tcatcaacgt ttcaacgtgc tggtttgtac aaccattatc
    12481 gaaaccggga tcgacatccc gacagccaac accattatca ttgaacgcgc ggatcacttc
    12541 ggtctggcgc agctgcacca gttacgcggt cgcgtcggac gttcacatca tcaggcatat
    12601 gcatggctgc tgacgccgca tccaaaagcg atgactaccg atgcacaaaa acgtcttgaa
    12661 gcgattgcct cgctggaaga tctcggtgca ggctttgcgc tggcaacgca cgatctggag
    12721 atccgcggcg cgggtgaact gcttggcgaa gaacaaagtg gctcaatgga aaccatcggt
    12781 ttctcgctgt atatggagtt gctggaaaac gccgtcgatg cactgaaagc cggacgcgag
    12841 ccgtcgctgg aagatctcac cagccagcaa acagaagtcg agctgcggat gccgtcgcta
    12901 ttgccagatg atttcattcc tgacgtgaat acgcgtttgt cgttctataa acgtattgcc
    12961 agcgccaaaa cggaaaacga actggaagag atcaaagtcg agcttatcga tcgcttcggc
    13021 ctgctgccgg atccggcgcg taccctgctg gatgttgccc gtctgcgcca gcaagcgcag
    13081 aaactgggga tcaggaagct ggaaggtaat gagaaaggcg gggtgatcga atttgccgag
    13141 aagaatcacg ttaatccggc ctggttgatt ggtttgctgc aaaaacagcc gcagcattac
    13201 cgccttgatg gtccgacgcg cctgaaattt attcaggatt tgagtgagcg gaaaacgcgt
    13261 atcgaatggg tacgccagtt tatgcgtgaa ctggaagaga acgcgatcgc ttaatggtaa
    13321 atcgggggcg tttctgcgcc cccatcggca acatttacaa attctttgca cttccctgca
    13381 ctatccgaca ctgtcaccat ccataattca ggcttatctg tttattacaa taaccttata
    13441 tttattatgg atttttggtg atgatcaaaa cgcgtttttc tcgctggcta acgtttttta
    13501 cgttcgccgc tgccgtggcg ctggcgctac cggcaaaagc caacacctgg ccgctgccgc
    13561 cagcgggcag tcgtctggtt ggcgaaaaca aatttcatgt ggtggaaaat gacggtggtt
    13621 ctctggaagc catcgccaaa aaatataacg tcggctttct cgctctgtta caggctaacc
    13681 ccggcgttga tccttacgta ccgcgcgcgg gcagcgtgtt aacgatcccg ttgcaaaccc
    13741 tacttccaga cgcgccgcgc gaaggcattg tgatcaacat tgcggagctg cgtctctatt
    13801 actacccgcc gggtaaaaat tcggtaaccg tgtatccaat aggtattggt cagttaggtg
    13861 gtgacacgct gacaccgaca atggtgacca ccgtttcaga caaacgtgca aacccaacct
    13921 ggacgccaac ggcaaacacc cgcgcccgtt ataaagcaca gggaattgag ttgcctgcgg
    13981 tagtgccggc tggaccggat aacccaatgg gccatcatgc gattcgtctg gcggcctatg
    14041 gcggcgttta tttgcttcat ggtacgaacg ccgatttcgg cattggcatg cgggtaagtt
    14101 ctggctgtat tcgtctgcgg gatgacgata tcaaaacact ctttagccag gtcaccccag
    14161 gcaccaaagt gaatatcatc aacactccga taaaagtctc tgccgaacca aacggtgcgc
    14221 gtctggttga agtacatcag ccgctgtcag agaagattga tgacgatccg cagctgctgc
    14281 caattacgct gaatagcgca atgcaatcat ttaaagatgc agcacaaact gacgctgaag
    14341 tgatgcaaca tgtgatggat gtccgttccg ggatgccggt ggatgtccgc cgtcatcaag
    14401 tgagcccaca aactctgtaa atcctggata aaaaaaatcc ccgcgacacg gcatgtcgcg
    14461 gggaaaaaat cagcagtagc aggcattaat gagggttaat gcttatttat aaattactgc
    14521 tgttccatgg agggtattcg gaccggttac agaagtaata cggaaagatt ttgcacccat
    14581 ctcatccgct ttttgcgcca gctgctcttc cagcgatccc agatttgtcc ccgctttagc
    14641 actgattgta ccgacttttt gttggccttc tggcgttgac tgaacttcga cagccgcaaa
    14701 gctggcaaat gacatggagc ttaaaatcgc cgcagcgatg agggttttta cgtttttcat
    14761 aatagtggcc ttatgcagat gaatgacgtc gcaagcaatt acttaacgat cgataactaa
    14821 atgacagatg tgatctggat cacatacaag atatttttta taacaatcat taattaattt
    14881 aaaaatcttt aaatttcagt taaatagaaa gcaattattt ttatgggatc tggactggtg
    14941 aacggaggtg attattttta taataatctt tcattcacag tcaccaggta caacggcatc
    15001 atggcaactg actcaacaca atgtgtaaaa aaaagccgtg gccgcccaaa agtgttcgac
    15061 agggatgccg cgcttgataa ggccatgaaa ttgttctggc aacacggtta tgaagcgact
    15121 tctcttgcgg acctcgtcga agcgaccgga gccaaagcgc ccacgctata cgcggaattt
    15181 accaacaaag aggggttatt tcgtgccgtt ctcgaccgct atatcgatcg ttttgccgct
    15241 aagcatgaag cacagctgtt ttgtgaagag aaaagcgtgg agtctgcgct ggctgactat
    15301 tttgctgcca tcgccaactg ctttaccagc aaagacaccc cggcaggctg cttcatgatc
    15361 aacaactgca ccaccctctc cccagattca ggagatatcg ccaatacgtt gaaatcacgc
    15421 catgcgatgc aagagcgcac tttgcagcag tttttatgtc aacgacaagc gcgcggggaa
    15481 atcccgaccc actgtgacgt gacacatctg gcagaattcc ttaattgtat tattcagggg
    15541 atgtcgatca gcgcacgcga aggtgcatcg ctggaaaaac taatgcagat tgccggaacg
    15601 actttgcgtt tatggcccga actggtgaaa taagtcgcaa aaaaagcccc tcagcctgag
    15661 cgaatgaggg gccaaattgc agagtacagc cttgttatac tttgttattc aaaatcagtt
    15721 gcccattact atctagcggg atctgcgtac ccggatcgcg gtccatgcgg attttgccct
    15781 gctgatcgcc aatcttatag gtcacatcat aaccgagcat tttttctgac ttgtcataca
    15841 ccgttttaca acgctgttgc gtagtcgtgt aagtatcgct ttcctggaga gagccctgga
    15901 tctggttacc ggcatatcca ccacccagcg cccccacaac agtggcgaca tctttaccgc
    15961 gaccaccgcc aaactgatgc cctatcacgc cgccagcaac agcgccgagc accgacccgg
    16021 taatgcgatt ttcatcctgc accggtcgac gatgggtcac tgtgacgttg cgacactcct
    16081 gacgcggtgt tttaaccgtt tccttgattg gggttgcaga aacaacctga gcgtattgcg
    16141 ggccacgttc aaacacgttc agactggcca ctgccgctac gcccagcgca gctgcgacac
    16201 caatcccgat acccgccaac attgatttat tcacgggaac acctccttct ttgcagttat
    16261 gccaatcatg caagcgaagg agaaaagcag ctatcagaca gaagatgaaa agcgcgggaa
    16321 tggctggaaa tacttaatga ttcggaggag tctgaaggaa tgcctgatgc gacgcttaac
    16381 gcgtcttatc aggcctaccg ctcgtaccat ttgtccaggg cggatgaggc gtttatgcca
    16441 catccgccag tgtacgtcga ttaatgcaac ttcaaacgcg gacggataac gcggttaata
    16501 ctccccacca gcatcattaa tccggtttta aagtaaccat gcagcgcaat ctgatgcatt
    16561 cggtatagcg agatatatac aaagcgcgca attcgtcctt caatcatcat tgagccgcgc
    16621 gtcaagttac ccatcaggct accaacggtg gagaagttcg acagcgatac cagtgaacca
    16681 tgatctttat actgataatt tttcagcggc ttaccgttta tctgcgccag aatattgttc
    16741 attgcgcaag tcgccatctg gtgtgcagcc tgagcacgcg gcggaacaaa gcccccttcc
    16801 ggacgcgtgc atgacgcgca gtcgccaata gcgtaaatgt ctggatcgtg ggtggtttgc
    16861 agcgtcggtt ccaccaccag ctggttgata cggttagttt caagaccacc gatatctttc
    16921 aggaagtctg gcgctttgat cccggctgcc cacaccatca gatcagcctc aatatattca
    16981 ccatctttag tgtgcaggcc gccttcatca gcactggtga ccatggtttg cgtcagcacg
    17041 cgaacgccaa gtttcgttaa ctcactatgg gccgcagcag agatgcgtgg cggtaatgca
    17101 ggcaaaatac gttctcccgc ttctactagc gttacgttca gggcttcgtt ggtcagacct
    17161 ttataaccgt agctgtgcag ttgcttgacc gcgttatgca actcagcgga gagttctaca
    17221 cccgtcgcgc cgccaccgac aatcgcaatg ttcactttgc cattcgcgcc caggttggcg
    17281 gagtatttca ggaacagatt cagcatctcc tggtggaagc gacgcgcctg gtgcgggtta
    17341 tcgaggaaaa tgcagttctc tttgacgcct ggcgtattga aatcgttaga ggtgctaccc
    17401 agcgccatga ccagggtatc ataggcgatt ttacgttccg gaaccagcag ttcacctttc
    17461 tcgtcgcgta gttctgcaat agtgattgtt ttcgcttcac gatcaatatc aatgacggaa
    17521 cccaactgga actggaaacc atgattgcgc gcatgggcca gatagctcaa cgcatcgacg
    17581 ccttcatcaa gcgagccagt cgccacttcg tgcagcagcg gtttccacag gtggctgtgg
    17641 ttacgatcga ccagcgtaat tttggctttt ttcttacgtc ccagcttatg ccccagctgt
    17701 gttgccattt ccagcccacc agcaccgccg ccgacaatca caatcttttt caatggcgta
    17761 gtcaacgtga cccccttaaa tttattaacc aattgttaat taatggttat taacatagct
    17821 cttaattaac aacaggttac agcaatgaaa atgttcttcg ctattgagaa taacatgaat
    17881 ggtgcattgg tcataccaaa attgatgtta atcaagtttt gttgctgaaa agataggcga
    17941 ctttaccggg tgagatcaaa aaatagagtt tattgtttat tatttgagcg aatttgtgag
    18001 agtgatatag agtgaggggt gtatgcaggg cgttcggtag gcctgataag aggcgcatca
    18061 ggcattgatg ctcgactgtc ggatgcggcg taaacgcctt atccgactta cagaattcgg
    18121 agcgcatcag gtaccggcaa ggttacctga tgcgacgagg gcatttaccc gagggttttg
    18181 aacgctttaa tgcgctgcaa atgcggggag atattcttga atttgtgcgt ctgctcttcg
    18241 tcccagacaa tctcgtaata atgatgcaac tcttcagatg tccgctggct gttaagcgct
    18301 tcatcattac gcgacaaaat caccaggcaa cgatcgcgat tcttctcgcg gaagttggtc
    18361 acacacttag tggcaatatc ggcatactct tccgggcgat caatcttgcc ttccatgttc
    18421 tcataaggga acaaattagg gttgaagatc acctggcgga tatcgcaaag aaaaccaatc
    18481 cgttccgccc agtatccgcc cagaccaacg ccgcaaatca gcggacgctc gtcgacgttc
    18541 agttgcaaca ttttgtccac ttctttaagc agatgctgca tatcatgttt cggatgccgc
    18601 gtactgtagc ttatcaagcg tacatccggg tcaataaact gcaattgtaa gactttctcg
    18661 tggttacccg gactgttaga gtcaaaaccg tgtaaataga taatcatcgc ttcctcacat
    18721 aagccagggt tagtgacctg ctttctcttc ctgccagcgt tcatgtaact gattcagacg
    18781 ggtgctgctc gccttccagc gagccgagtc catcagttcc tgtcgcgaaa atgaaccttt
    18841 atgatacaaa cgtgtaacac gttctgcctt gatcggtgac agattatcta acacgctgac
    18901 ggccccttta cgattattgc agaccaggat catatcgcaa cctgcgtcca gtgatgcctg
    18961 cccgcgttcg gcataactgc ccataatcgc ggcaccttcc atcgataaat cgtcagagaa
    19021 aattacaccg tcaaaacaca gttcctgacg caaaacggtt ttcagccagt aagaagaacc
    19081 gctcgccgga cgcggatcaa catcactgta gatcacatgc gcaggcataa tggcgtcgag
    19141 tttattttcg cggattaacg tgctgaaaac cgacatatct ttggcacgaa tttccgcttg
    19201 cgggcgtggg tcgcacggcg tctctttgtg tgaatctgca gttactgcac cgtgtcctgg
    19261 gaagtgtttc ccggtcgttt tcattccggc ttcatgcatc ccatcaataa accgactagc
    19321 gattgccagg gctttttctg ggtcggcatg ataagaacgc tcgccaatcg ccgcgctgat
    19381 atgtcctaca tccagcactg gcgcaaagct gatatcaata tccatagcga tcatttcgct
    19441 ggccatcagc caacccgcct cttgcgccag tttgccgccc tcttccattc ccaacagcgc
    19501 agcaaaggat tgtgctgccg gtaagcgggt aaaaccttcg cgaaaacgct gcacgcgtcc
    19561 accttcctga tctaccgcca ccaccagatg attgcgcgat gctgcgcgga tctggcgcac
    19621 cagttcacgt aactgggcag gatcatgata gttacgcgta aagagaatca gccctcccac
    19681 cagcggatgc gccagtattt cacgctcttc cgcgtccagt tcataacctt cgacatccaa
    19741 cattactgga cccacactgc tctccttatt gttttattaa tagctgccgc caggtgtcat
    19801 cggccagcct gataaattgt tgatcgccgg tttgtcgcca gcggtactca aaccaccctg
    19861 ctttgagcat cagcagccag ggaaaccatc gcctgacctg acgccataat tgcgccggat
    19921 aaatcttcgc gcgagtggca tagtcattga ccaattgccg gtgctgttca gtattttcca
    19981 cccacaccgc cgccagttcc agcgcggtat caccatctcc ggcatactcc cagtcgatga
    20041 gttttaaccc tgatgcgcta tgcactaaat ttccggcgtg gacatccata tgcaatggac
    20101 ttaagcgtaa aggtcgtggt tcccgcgctt tgcgcagacg ttttaacatt cgcagccaac
    20161 ccacagtccg ccgcgccgga tcgctttgct gccagtacag ttccagtaac ggcaacagcg
    20221 ttattcgcca gccaaaacgt ggttgttgat gtagataata cagcaagcct gccagttcgt
    20281 tggtatccgg caaatacgtt tttaccgcgc cgggcagata gtcgactacc atccagtcac
    20341 ggagatataa atgcggcttc ggtgcaatgc ttgcgggtag ttgtgataaa gcccgatact
    20401 ggcgcaagaa cgcggactgc ggcgcatcag gatcgtgcgg ctgacgcaca acaaaacgct
    20461 ggccctgatg ttcaatgaga aaactaccgc cactaagccc actattaaac gtcgtgacgg
    20521 gatgaaactg cgggaaaaag cgcgacagca attcgtcgcg cgtgatggga ttattactgc
    20581 gaaacggcac ctttacctga ccagataatt tcgcccgtct gcaccagcat cagctgcatt
    20641 tgtagggtcg gagcgttaac gttgccagag gcgctggagt acagcacgta atgagcgccg
    20701 acattgcggg caatgcctat ggctttacta cgggtgccta aactgtcctg cggcgacaaa
    20761 cctaactgtt gcttagccat cgacagttgc tgggcggaaa ccagggtaaa tttcccgtta
    20821 ttagccagcg catttcgcag cgtttcggtc gcttctgcgg cattcagcga accgttagta
    20881 cggttgttaa cgctatcaac cagcaggacg ctacccgcag tcaccccgtc agccccaagc
    20941 atcttactga ctatcggctg cattgcgcca ttccagtcat aatggcgaat atgcggcgca
    21001 ggcggtgccg ttcgatcttc gtgctcaatt gggcctggct gctgcgggat cgtcggcacc
    21061 gagggcactg tggggacagg ctgttgtggc tcggctggtt gttccggcgc tggtttcact
    21121 tcttctaccg gtgcaggttc acgttgcccc acacacccgg cgagaaacat cgccagcgcg
    21181 gtaatcaagg cgtagcgact catttttgtc atcaagattc accccttaca aatatagata
    21241 aagtctgact ttgtgcgccc ccagaaaatt ggcgctgccg tacagcgtta ccgccgaatg
    21301 tgcgggaatg gtaacgctgc gtggcctttc cagaggatgc atctccagcc ctctggcgtc
    21361 ataccagtaa aaacgataat gaacggtaac gggtttttgc ctttcgttat aaagcgttga
    21421 ggatgctgaa ggttgaatat cagacgtcga aaggacgggc ttttctgcac tgatgcccgc
    21481 agccaataaa gatgactcca tcaccagcga ttgctcatca ttcaccggaa tttccggatg
    21541 tgaacgacag cccaccagca gtaacaacac cagagacacc agcccaaagc atccttttct
    21601 catcgttaca gacctttatg cgccagcatt ggtcccagcg gacggccacc caacaagtgc
    21661 atatggatgt ggtaaacctc ttgtccgcca tggcggttgg tattcatgat cagacgatag
    21721 ccatcttcgg caataccttc ttgctcagca atttttgcca ctacggtgat catgcgtccc
    21781 agcgcctgct catgctcagc tgagacgtcg ttcacagtcg gaatgaggat attcggaatg
    21841 atcagaatat gcgttggcgc ttgcggcgaa atatcgcgaa acgccgttac cagatcatcc
    21901 tggtagacga tatcggaggg gatctcacga cgaataattt tgctgaatat agtttcttct
    21961 gccacgacat tttccttttt caaatagcca tgcgttgcgc catgctacgc cgcgccacac
    22021 tgcgagtata gagtatggtc gagttaaacc tgctctttca accttaactc acgatttctt
    22081 aagcaaaaaa tcgttttgct gccgtatata tcgccattat tcccatttct gcctgcgaat
    22141 gcgctgaaaa gacattctct gtttggttta cacgacaaat atgaatgcgt atatttctca
    22201 tttgcattta caaacaaaat tattcgcaca ctaaatataa tcgctcatca ccctcctccg
    22261 gcatgagcct gacgacaaca taaaccatga gatttcaaat gctttcaaca caatttaaca
    22321 gggataatca atatcaagcc atcaccaaac cgtcactact tgccggttgc atagcactgg
    22381 cactattacc ttctgccgct tttgctgcac cagccactga agaaacggtg attgttgagg
    22441 gttcagccac agctccagat gatggc
//
LOCUS       DAJVUK010000060        22271 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.060, whole genome shotgun sequence.
ACCESSION   DAJVUK010000060 DAJVUK010000000
VERSION     DAJVUK010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22271
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.060"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1298
                     /locus_tag="OQQ57_002085"
     CDS             <1..1298
                     /locus_tag="OQQ57_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HCS1956855.1"
                     /translation="WLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPY
                     VRILTQDEIDVRIKRFWRYLDGTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNL
                     TFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGG
                     GSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLV
                     KEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVA
                     NTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGI
                     SDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYR
                     AEGSRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ"
     gene            1270..2133
                     /locus_tag="OQQ57_002086"
     CDS             1270..2133
                     /locus_tag="OQQ57_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HCS1956856.1"
                     /translation="MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEV
                     LSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETG
                     WEKLLPVCDGAMLDLKAWGSECHQHLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQ
                     VDYLHHIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRG
                     VSRLIFPALYL"
     gene            complement(2347..3129)
                     /locus_tag="OQQ57_002087"
     CDS             complement(2347..3129)
                     /locus_tag="OQQ57_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1956857.1"
                     /translation="MICRFIDTHCHFDFLPFSGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDL
                     FGDDPQLERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG"
     gene            complement(3126..4199)
                     /locus_tag="OQQ57_002088"
     CDS             complement(3126..4199)
                     /locus_tag="OQQ57_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HCS1956858.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGCYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVIDAPQANDPTFNNEDLA"
     gene            complement(4321..4482)
                     /locus_tag="OQQ57_002089"
     CDS             complement(4321..4482)
                     /locus_tag="OQQ57_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HCS1956859.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKRP"
     gene            complement(4609..5214)
                     /gene="osmY"
                     /locus_tag="OQQ57_002090"
                     /pseudo
     CDS             complement(4609..5214)
                     /gene="osmY"
                     /locus_tag="OQQ57_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
     gene            complement(5607..7196)
                     /gene="prfC"
                     /locus_tag="OQQ57_002091"
     CDS             complement(5607..7196)
                     /gene="prfC"
                     /locus_tag="OQQ57_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HCS1956860.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
                     PAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     SRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSM
                     VNLRLAQERYPDVQFHQTREH"
     gene            complement(7287..7964)
                     /gene="yjjG"
                     /locus_tag="OQQ57_002092"
     CDS             complement(7287..7964)
                     /gene="yjjG"
                     /locus_tag="OQQ57_002092"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HCS1956861.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGIAKPNKKIFDYAL
                     ELAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHLEQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            complement(7979..8425)
                     /gene="rimI"
                     /locus_tag="OQQ57_002093"
     CDS             complement(7979..8425)
                     /gene="rimI"
                     /locus_tag="OQQ57_002093"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HCS1956862.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKNFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIVVDPDYQRQGLGRVLLKHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            complement(8394..8807)
                     /gene="holD"
                     /locus_tag="OQQ57_002094"
     CDS             complement(8394..8807)
                     /gene="holD"
                     /locus_tag="OQQ57_002094"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HCS1956863.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            8910..9941
                     /gene="rsmC"
                     /locus_tag="OQQ57_002095"
     CDS             8910..9941
                     /gene="rsmC"
                     /locus_tag="OQQ57_002095"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HCS1956864.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHWQVLSRQMGDNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            10209..10295
                     /locus_tag="OQQ57_002096"
     tRNA            10209..10295
                     /locus_tag="OQQ57_002096"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10243..10245,aa:Leu,seq:cag)
     gene            10324..10410
                     /locus_tag="OQQ57_002097"
     tRNA            10324..10410
                     /locus_tag="OQQ57_002097"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10358..10360,aa:Leu,seq:cag)
     gene            10446..10532
                     /locus_tag="OQQ57_002098"
     tRNA            10446..10532
                     /locus_tag="OQQ57_002098"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10480..10482,aa:Leu,seq:cag)
     gene            complement(10571..10807)
                     /locus_tag="OQQ57_002099"
     CDS             complement(10571..10807)
                     /locus_tag="OQQ57_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HCS1956865.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG"
     gene            10948..11736
                     /gene="fhuF"
                     /locus_tag="OQQ57_002100"
     CDS             10948..11736
                     /gene="fhuF"
                     /locus_tag="OQQ57_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HCS1956866.1"
                     /translation="MAYRSAPLYEDIIWRTHLQPQDAGLAQAVRATIAKHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEK
                     TLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            complement(11774..12450)
                     /gene="bglJ"
                     /locus_tag="OQQ57_002101"
                     /pseudo
     CDS             complement(11774..12450)
                     /gene="bglJ"
                     /locus_tag="OQQ57_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
     gene            complement(12408..13133)
                     /locus_tag="OQQ57_002102"
     CDS             complement(12408..13133)
                     /locus_tag="OQQ57_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCS1956867.1"
                     /translation="MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDF
                     TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM
                     CPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMNETHDFSYRSVILTLSERK
                     VLRLLGEGWGINQIVSLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN
                     LPSVYGDAAEWNTAELRREMSHS"
     gene            13752..14522
                     /locus_tag="OQQ57_002103"
     CDS             13752..14522
                     /locus_tag="OQQ57_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HCS1956868.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAIITFFASTAAMYIRQLLAQ
                     RHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            14513..14986
                     /locus_tag="OQQ57_002104"
     CDS             14513..14986
                     /locus_tag="OQQ57_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HCS1956869.1"
                     /translation="MGVIEFLFALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTRGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            15094..15633
                     /gene="dnaT"
                     /locus_tag="OQQ57_002105"
     CDS             15094..15633
                     /gene="dnaT"
                     /locus_tag="OQQ57_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HCS1956870.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFI
                     RLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPK
                     RDVNTVSEPDSQIPPGFRG"
     gene            15636..16373
                     /gene="dnaC"
                     /locus_tag="OQQ57_002106"
     CDS             15636..16373
                     /gene="dnaC"
                     /locus_tag="OQQ57_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HCS1956871.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            16422..16916
                     /locus_tag="OQQ57_002107"
     CDS             16422..16916
                     /locus_tag="OQQ57_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HCS1956872.1"
                     /translation="MMETVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLE
                     KLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            17170..19461
                     /gene="opgB"
                     /locus_tag="OQQ57_002108"
     CDS             17170..19461
                     /gene="opgB"
                     /locus_tag="OQQ57_002108"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HCS1956873.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(19600..20622)
                     /gene="lgoD"
                     /locus_tag="OQQ57_002109"
     CDS             complement(19600..20622)
                     /gene="lgoD"
                     /locus_tag="OQQ57_002109"
                     /EC_number="1.1.1.414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-galactonate oxidoreductase"
                     /protein_id="HCS1956874.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVRLGKNIADLKNGLQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDF
                     DAQLRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELI
                     KGVITF"
     gene            20761..21675
                     /locus_tag="OQQ57_002110"
     CDS             20761..21675
                     /locus_tag="OQQ57_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCS1956875.1"
                     /translation="MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTT
                     VRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTLINQR
                     QLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQL
                     FELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHS
                     LLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLD
                     ATLALRNHLNSAKQSMIRSINENTRYAH"
     gene            21890..>22271
                     /locus_tag="OQQ57_002111"
     CDS             21890..>22271
                     /locus_tag="OQQ57_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1956876.1"
                     /translation="MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAM
                     LLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLD
                     RKGPRLMLGLGMFFWSLFQAMSGMV"
BASE COUNT         5503 a         5830 c         5504 g         5434 t
ORIGIN      
        1 aatggctgga gctggaaggc gcgaaagatc ttgatgacgc actctctctg ctgaccattc
       61 tttaccacca cgtaccgtcg gtcacatcga tgccggtcta cctagggcaa ctggatgcgt
      121 tgttgcaacc gtatgttaga attctaacac aagacgagat cgatgttcga ataaaacgtt
      181 tctggcgtta cctcgacgga accctgccag acgcctttat gcacgccaat atcggcccgt
      241 ctgattcgcc cattacccgc gcgatcttac gtgcagacgc agagttgaag caggtttcac
      301 cgaacctgac ctttatctac gatcctgaaa tcccccctga tgacctgctg ctggaagtgg
      361 cgaagaacat ctgtgaatgt agcaaaccgc acatcgccaa cggtccggtg catgataaaa
      421 ttttcacaaa agggggctac gggattgtga gctgttacaa ctcactgccg ctggcgggtg
      481 gtggcagcac gctggtacgc cttaacctga aagccattgc cgagcgcagc gaatcgctgg
      541 atgacttctt tacgcgcact ctaccgcact actgccagca gcagatcgcc atcatcgatg
      601 cgcggtgtga attcctctat caacaatcac acttctttga gaatagcttc ctggtgaaag
      661 aagggctgat taaccctgaa cgttttgtgc caatgtttgg catgtatggg ctggcggaag
      721 cggttaactt gctgtgtgag aaagaaggga ttgccgcgcg ctacggtaaa gaagccgccg
      781 caaatgaagt gggttatcgc atcagcgcgc aactggcgga gtttgtcgcc aatacccccg
      841 tgaaatatgg ctggcaaaaa cgcgccatgt tacacgcaca gtcggggatc agttccgata
      901 tcggcaccac gccgggcgcg cgtttgccgt atggcgatga gccagatccg atcatccatc
      961 tgcaaactgt cgccccgcat catgcttatt attattccgg catcagcgac attctgacgc
     1021 tcgacgaaac catcaaacgt aatccgcagg cgctggtaca gctttgcctc ggtgccttta
     1081 aagccggaat gcgtgaattt accgccaatg tcagcggtaa cgatctggtt cgcgttaccg
     1141 gttatatggt gcgtttgtcg gatttagaaa aatatcgcgc cgaaggttca cgcaccaaca
     1201 ccacctggct gggcgaagaa gccacacgca acactcgtat tctggaacgc cagccgcgcg
     1261 tgataagcca tgaacagcag atgcgcttta gtcagtaaga ttatcccctt ctcctgcgtt
     1321 gacgggccag gcagtcgtct ggctctgttt ctgcagggct gcaatctgcg ctgcaaaaac
     1381 tgtcacaatc cgtggacgat gggacgctgc aatgattgcg gagagtgcgt gccacagtgt
     1441 ccgcatcagg cgttgcagat tgttgacggc aaagtgctgt ggaacgctgt ggtctgcgag
     1501 cagtgtgata cctgcctgaa gatgtgtccg caacatgcca cgccaatggc gcaatccatg
     1561 agcgtggacg aagtgcttag ccatgtccgc aaagcggtgc tgtttattga agggataacg
     1621 gtaagcggcg gcgaagccac gacccaactg ccgtttgtag tggcgctgtt tactgctatc
     1681 aaaaacgatc cgcaactgcg ccacctcacc tgcctggtgg acagtaacgg catgttgagc
     1741 gaaaccggct gggaaaaatt actcccggtg tgtgacggcg caatgctcga tctcaaagcg
     1801 tgggggagcg aatgtcatca acacttaacc ggacgcgata atcagcagat taagcgcagc
     1861 atctgtttgc ttgcagagcg cggcaagctg gcggaactgc gtttgctggt aattccagac
     1921 caggtggatt atttgcatca catcgatgag ctggcgacgt ttatcaagag acttggcgat
     1981 gttccggttc gcctgaatgc gtttcatgcc cacggcgtgt atggcgaggc gcaaagctgg
     2041 gcgagcgcca cgccggaaga cgttgagccg ttggctgatg cgttaaaggt gcgcggggtg
     2101 agccggttga tatttccggc gctctatttg tgacatgccg gatacggcct acggttcggc
     2161 acagacttgt aggcatgata agacgcgaca agcgtcgcat caggcattgt gcgccaactg
     2221 ccggatgcgg cgtgaacgcc ttatccggcc tacggttcgg cacaaacctg taggcatgat
     2281 aagacgcgac aagcgtcgca tcaggcatta tgcgccgact gccggatact gcctacgaag
     2341 ggtaaactac ccactaacgc taaacaacgc atacgtatta ttaagcaaca cttcggcaat
     2401 ctcatcttct ggttccgggc gcaactcgca aagcacgtca aacacccgca cagcctgttc
     2461 cggtcggtta ggctgcccct gaaagccgtt gagcggcata tccggcgcgt cggtttccag
     2521 caacaacgat gccagcggta attttgcgat gacatcgcgg gttttactgg cgcgtggata
     2581 ggtgatagta ccgcctacgc cgattttgta gcccagctgt acaaaccgct cggcctgttg
     2641 caggctgccg gaaaaaccgt gaaccacgcc agtgcgcgat aaatcgtggc gtttaagatg
     2701 catcgccagt ttgtcgtgtg tgcgccgtga atgcaggatc accggcagat cgtagcgttt
     2761 cgccagtttc agctgttcgt cgagtaacca ctgctgcctc tcaagttgcg gatcgtcgcc
     2821 gaagagatcc agaccgacct cccccactgc caccaccttc gccggacgcc tttccagcgc
     2881 ctgctgtagc tgctcaagag acacatcgct atgtttttcc aacatacctg gatgcaagcc
     2941 caatgcggca tacagcggtt gatatttttc cgctaacgcc tgcacacggg caaaattttc
     3001 cgcctctgtc gccggaacaa tgatcttgcc tacgcccgct tgtgccgcgc gttgcaggct
     3061 ggcctcttca tcgccactaa acggcaggaa atcaaaatgg cagtgggtgt cgataaaacg
     3121 gcaaatcaag ccagatcctc attgttaaat gtcgggtcgt tcgcctgcgg agcgtcaatc
     3181 acttcggcaa ccagcgtatc gttggcgact ggcgcaggcg gaataacgat cgattccggc
     3241 gtcaccactg gcaccagatg gcgggtaagc ggcgcttttt cagttaatag cttgccaacc
     3301 gtggcgagga aataacaacc gcataaacgc ccaagtttat agtcttcacg cagcgccgga
     3361 atccgactgc caagcgcgat actatgtaat ggcttcggcg gataaatttc gaatatccgc
     3421 agcttgcccg gtggtttctc aataaattgc tgaatgtcac gatagctggt ttcatgatgc
     3481 tgcaccagat tgaccagcgg ctgcaggcta ctgtcaccca gccagcgttc catgcgtttg
     3541 aaccactgcg gcgtgtagta catttgtgac ggcacagtgc gaatgacgac caacgtttta
     3601 gcgccctgcc ttgccgcctc tttaaccgga atcgcatcac tgatcccgcc atccaggtag
     3661 ttaatgcctt ccagcgacac tccgctacga taaaagccag gtatcgcact ggaggcgcga
     3721 atcacatcca gccagttttg tttggttggt aaaaagtaat taggcgcgta gtcatcctga
     3781 cgacaggcgc acatataaaa cgatttgccg ctgtcaaaca accgcgcggc ggtatccatt
     3841 tgcaacggca tctggcttgc ggtggcctcc accagccagt cgagatcgat aagatttcct
     3901 ccacggacaa agcgcaatgg atcgaaaaat tcgcgttttg tggtatagcg catgatgact
     3961 ttacgcgcgt aaccgggctg attgcagata aacgccgaga ggttctgcgc cccggcagat
     4021 gtgccgagat aaagatcgaa aggattaaac tgcgcgcgca taaactcatc cagcacgcca
     4081 gccgtgaaaa ttccacgctg tccgccgcct tcgcacacca gagctattcg tccaggctgg
     4141 aacggcctta gcgacaacgg cgcaatatta ccaagcgtta caggtattcg ctgccccacc
     4201 tctgccttcc tgtttttgtt gtgaaagaat gacaaagtaa cgcaatttat tattcgctaa
     4261 aaccgcaaaa gccagtccgc tggactggct ttggataaaa ttttcttaat ggtctgaaat
     4321 ctagggtcgt tttcggccca tgaacaaact caccaggaac agaataatcc cgacgacaaa
     4381 gacaatttta gctgcgcctg cagcggtacc ggccaaacca ccaaacccaa gtgcggcggc
     4441 gattaacgcg ataaccagaa atatgatgcc ccaacgaaac ataagcgtct cctttaccat
     4501 agttaatgtc accgcttgat atgagcgtga aaatcactca atgcgatatt tttagtgtgg
     4561 tgcacatcgc gcctcccgac aaagttcggg aggacgaatt acgacgaatt acttagtttt
     4621 cagatcattt ttaacgcttt tcacaccatc taccgctttg gcgatacttt cagcacggtc
     4681 actttgtgcc tgagaatcta cggtaccgga gagctgaacc acgccgtcgg tggtttcaac
     4741 tttcacatga cgggaaggga cgatatcgtc cgccagcagt ttggctttga tttcactggt
     4801 ggtggcggtg tcacccgcgt agcccttcac cgagccttct ttagcgtcgc gaacgtgcag
     4861 tttgtcgctg acagaggtca ccccttcaac gcctttcgcc actttcactg cctcttcggc
     4921 ctgagcctag ctttcaacga aaccgctcag ggtcacgact ttttgctcgg ttttgacaga
     4981 gatatcggtg ctcttgatgt tgtcatgatc caccagcgcc gccttcactt tcgcggtgat
     5041 ggcgctgtca tccatgaaat taccgacttt attcatagag ctatcgactt tttgccctgc
     5101 gctttcattg gtagtctgtg cgttgttttc cgcgtaggca gagccggtcg cgacggcaga
     5161 ggtcaacatt acagccagca gagttttcga aatcttcagt cttgtcatag tcatcgattt
     5221 attcctgtat gtttgctcgt aatttgagcc tggcaacacg aggttgcatt gctgaatagg
     5281 gagagacttc accctctaca gaagtcaatg gccgccatca caaaagcgat gggtgatgaa
     5341 taacgaccat tacagcctct gaatcagtta ttaatatcgg tagaatgaca atcgacggct
     5401 ttagatactg atatctacgc attgaacggt atttaacgcc gtcagaaatg tcattacttt
     5461 gttaaatata gatcacaatt ttgaaaccgc tcgtgatatc agcgaaaaca taagcaaaag
     5521 tgaatgtttt aagaacattc cgtaagcggc taataaggaa gggaaattga cagggcgcag
     5581 cggctaccgc gccctggagg caagaattaa tgctcgcggg tctggtggaa ctgaacgtcg
     5641 ggataacgtt cctgcgccag gcgcaggttg accatgctgg tagcgatgta agcgaggtta
     5701 tcgccgccat caagcgccag ttggctttcg ttcttacgct tgaactcttc gaatttcttc
     5761 gcgtccgcac attctaccca gcgggcagtg gcaacgttga ctgattcata tactgcttca
     5821 acgttgtatt cgctcttcag gcgcgatacc accacatcaa actgcagcac accaacagca
     5881 ccaacgatca aatcgttgtt ggagatcgga cggaacacct gcaccgcgcc ctcttcggaa
     5941 agctgtacca gccctttgag cagctgtttt tgcttcagcg gatctttcag gcggatacga
     6001 cggaacagtt ctggtgcgaa gttcggaata ccggtgaact tcatcatctc accctgggta
     6061 aaggtgtcgc cgatctgaat agtgccgtgg ttgtgcaggc cgaggatatc gcccggatac
     6121 gcttcttcaa cgtgcgaacg gtcgcccgcc ataaaggtca gcgcgtcgga gataaccaca
     6181 tctttcgcag tacgcacctg gcgcagcttc atgccttttt catatttacc ggatactacg
     6241 cgcataaacg ccacgcggtc gcgatgtttc gggtccatat tggcctgaat tttaaatacg
     6301 aagccggtaa atttgtcttc gctcgcctct acggtacggg tatcagtctg acgcggcatc
     6361 ggcgcagggg cccactccac caggccatcc agcatatgat caacgccgaa gttacccagc
     6421 gcagtaccga agaataccgg agtgatttcg cccgcaagga acagttcttt gtcgaactcg
     6481 ttagacgcgc ctttcaccag ttccagttcg tcacgtagct gctgtgccag atcttcacca
     6541 accgcagcgt cgagatccgg gttattcagc cctttaacaa tacggacttc ctgaatcgtg
     6601 tggcctttac cgctctgata aagataggtt tcgtctttat aaaggtggta aacgccttta
     6661 aacagcttgc cgcagccaat cggccaggtg atcggtgcgc agccaatttt cagctcgttc
     6721 tcaacttcat cgagcagttc catcgggtcg cggatatcac ggtcaagttt gttcataaag
     6781 gtgaggatcg gcgtgtcgcg cagacgggta acttccatca gcttacgggt acgatcttca
     6841 acaccttttg cagcgtcgat aaccatcagg cagcagtcca ccgctgtcag ggtacgatag
     6901 gtatcttccg agaagtcttc gtgccccggg gtgtctagca ggttaaccag gcaatcgtga
     6961 tacggaaact gcatcacaga cgtagtaatg gagatcccac gctgcttttc catctccatc
     7021 cagtccgact tagcgtgctg gttggaacca cggcctttta ctgtaccagc ggtctgaatg
     7081 gcctgtccga acagcagcac cttctcggtg atggtagttt taccggcgtc cgggtgagaa
     7141 ataatggcaa aagtgcggcg cttcgccacc tcttgcaaat aaggagacaa cgtcataatt
     7201 ctttcttctt gagtaagcgg catcgcgccg cgcttgttga aaacgaaaaa ttgcggctat
     7261 tttacccatc aacggggggg aggcaatcag tgtttacaca ggagctgctc cagttcgtgc
     7321 aacgatgaaa cggtccaggt gggcgcgatg ccttctggtt gctcgagatg gtgcgcattc
     7381 agccagcaag tcgcaagccc ggcgttgatg ccaccgagaa tatcggactc ggcagtgtcg
     7441 ccaaccatca gcacgcgtga acggtcagga ttgcccgcca gttccagcgc ataatcgaaa
     7501 attttcttat tcggtttggc aatgccaact tcttcggaaa tcaccagcaa atcaaagtaa
     7561 tcacgcaggc ccgtccgttc cagacgcact tgctgcaagg cgctaaaacc gttggtgatg
     7621 atgccgattt tagcgttgcc acgaatggcg ttaagcagag aaaccgcgcc cggcagcggc
     7681 gtgcagattt ccgccatcgc attaataaag gcatcgttaa gcaagcctgc ttcaactttc
     7741 agccgttcgg cccagctctc gaaacgcccg tgctgaagct gtaatgaagt gatcgcgccg
     7801 ttttgataat ccacccacag tggcttgtta acggcctgat agtcctgaaa atcttcagcg
     7861 gtaaaggtga cgctgtaatc aagaaacatc cgctgcaggc cggtgaatga gtcaaaggta
     7921 aacagcgttt catcggcatc aaagaaaatc cagtcccact tcattattcc accttgtctt
     7981 acatactgat tggcaacgcc atgatgatgg cgtcttcgcg accgtccgtg gtggggtagt
     8041 aattgcggcg aatcgtcgcc tcgttaaagc ctaaactttc gtacagggca atggcggcag
     8101 cgtttgaagc acggacttcc agccatagtg tcgccacgcc gcgtttttcc agttcgtcga
     8161 tcagatgttt cagcagcacc cttcccaatc cctgacgctg atagtcagga tcgaccacaa
     8221 tattgaacaa tgtagcttca tccagcacca cttgcgtaat agcaaacgcc gccattttgc
     8281 cgttttgcgt taactgaaag ttgagataac gctcgccctg gttgctggca aagttttttt
     8341 cactccacgg aaaggcgtgg gcgcgttgtt caatgtggta agccgctggt aaatcagtcg
     8401 tttcgaggga agaaatcgtg ttcatatgtg caaatctgtt gccataacgc ggcgcgtgcc
     8461 gttgggtttg cccgtaattc ggtgagcgcc ggtgatgcca cctgagcgcc ttccagtgat
     8521 agcggttcgt cagtacccaa ccgccagctg ttgcagcgac tgccttgcgg cagcatcgcg
     8581 attttttctg gcgtcagttg cagcacttga tcggggctga cggttaatgc gcgcagaaca
     8641 tcgctcacta aaggatcggt cagggcggga agatcgtttg ccaccatcac cagacggacg
     8701 tgtgccggga tcgcaatggc aatctccccc tgcaacgcgc cagggcgacg cagcgaccac
     8761 tgggtaatgc ccagttgctg taactgccag tctcgtcggg atgtcatagc gaatcgctcc
     8821 tgttgtcagg ggcgcaaata tagcaaattc gtcgataccg cgccaacata tggctataat
     8881 cgccgccagt atcaattgag gagcattcca tgtctgcatt taccccggca agtgaagtct
     8941 tgctgcgtca cagtgatgat ttcgaacaaa gccgtattct gtttgccgga gacttacagg
     9001 atgacctgcc cgcgcgttta gataccgcgg ccagccgtgc tcatacccag caattccacc
     9061 actggcaggt attaagccgc cagatggggg ataacgcccg tttcagtctg gtcgccacgg
     9121 tggatgacgt cgcagattgc gatacgctga tttactactg gccgaagaac aaaccggaag
     9181 cccagttcca gttgatgaat ttactttctc tgctgccagt ggggacagat atttttgtcg
     9241 ttggcgagaa ccgcagcggc gtgcgcagcg ccgagcagat gctggcagat tatgcgccgt
     9301 tgaataaagt cgacagcgct cgtcgctgtg gcctctattt tggtcgtctg gaaaaacagc
     9361 cggtatttga tgccgataaa ttctggggcg aatacagcgt cgatggcctg acagtcaaaa
     9421 cgctgcctgg cgtgtttagc cgcgacggtc tggatgtcgg tagccagttg ctgctctcga
     9481 cgttaactcc gcacacgaaa ggtaaagtgc tggatgtcgg ctgtggcgcg ggggtgcttt
     9541 cagttgcctt tgcgcgccat tcgccgaaaa ttcgtctcac cttgtgcgat gtctctgcgc
     9601 cagcggtaga agccagccgc gcaacacttg cggccaactg tgttgaaggt gaagtctttg
     9661 ccagcaacgt cttttccgag gtgaaaggtc gttttgatat gatcatctcc aacccgccgt
     9721 tccacgatgg gatgcaaacc agcctggatg cggcgcaaac gctgattcgc ggcgcggtgc
     9781 gtcatcttaa tagtggcggc gagctgcgaa ttgtagcgaa cgccttcctg ccttatccgg
     9841 acgtgctgga tgaaacattt ggcttccatg aagtgattgc gcaaaccggg cgtttcaagg
     9901 tatatcgcgc cattatgacc cgccaggcga aaaaaggtta agtatcccgc cgcaagcctt
     9961 gccggatgcg gcgtaaacgc cttatccgac ctacaaaacc tgcacgttag cccttcgtag
    10021 gccagataag acgcgccagc gtcgcatctg gcatctgccc ccgcatgcct accaaacctg
    10081 cacgctagtt tcctgatgga catttttcca gcaattacac ctccggcgat aattaactat
    10141 tgacgaaaag ctgaaaacca ctagaatgcg cctccgtggt agcaattctt tttaagaatt
    10201 gatggtatgc gaaggtggcg gaattggtag acgcgctagc ttcaggtgtt agtgtcctta
    10261 cggacgtggg ggttcaagtc ccccccctcg caccaaaaac cacgttgata ttgctcgcac
    10321 tgggcgaagg tggcggaatt ggtagacgcg ctagcttcag gtgttagtgt tcttacggac
    10381 gtgggggttc aagtcccccc cctcgcacca aacgaggcga tatcaaaaaa aagtaagatg
    10441 attgtgcgaa ggtggcggaa ttggtagacg cgctagcttc aggtgttagt gtccttacgg
    10501 acgtgggggt tcaagtcccc cccctcgcac caattatctt tacttccttt cttgtttctt
    10561 ccttgatttt tcatccctga ttcaaattca ttatcatcag catgatggca gcaataagcg
    10621 ccaggcacga tggtagcaaa acgtaatgcc gtaactgttt gtgatacagc atcaccggcg
    10681 tcaatactaa tcccatcaga atgacaatcc gccactgatc cggcgataaa tccgcataca
    10741 tcagccctgc aatcagcaat cccggcagca acactcccca gccactgccc agcgtacgtt
    10801 gcaacatggt ttcatctctt tcattgataa tgataactaa tatcatatga taatttttat
    10861 catttgcaag ccagagaaat cccttgctat cgggtaaacc tatcgctagg attagcaatc
    10921 attatcattt agattactat cccgattatg gcctatcgtt ccgcaccgct ctatgaagat
    10981 atcatctggc gaacgcatct ccagccgcag gatgctgggc ttgcacaagc cgtacgtgcg
    11041 acgatcgcca aacatcgtga acatttgctc gagtttatcc gcctggatga acccgctccg
    11101 cttaacgcca tgacgctggc gcaatggtca tcaccgaatg cgctaagttc tctactcgcg
    11161 gtctattccg atcatatcta tcgcaaccaa ccaacgatga tccgcgagaa caaaccgctg
    11221 atctcactat gggcacaatg gtatatcggc ctgatggtgc caccattaat gctggcgcta
    11281 ctgacgcagg aaaaggcatt agatgtgtcg ccggaacatt tccatgctga gtttcacgaa
    11341 accggacgcg tcgcctgttt ctgggtcgat gtgtgtgaag ataaaaacgc aacaccacat
    11401 tcgccgcagc agcgaatgga aacgttaatc agccaggctc tggttccggt tgtgcaggca
    11461 ctagaagcga ccggagagat caacggcaaa cttatctgga gtaataccgg ttatttgatc
    11521 aactggtatc tcactgagat gaagcaactg ctcggcgagg cgacggttga atcgctgcgc
    11581 catgccctct tttttgagaa aacgctcacg aacggtgaag ataatccact ctggcgtacc
    11641 gtcgtgctgc gcgatggcct gctggtgcgc cgaacctgct gccagcgtta tcgcttaccg
    11701 gatgtgcagc aatgtggcga ttgtacgctg aaatgaaagc actgccgggg aagtaaaccc
    11761 ggcatcatgc ggattaatag ggatgcaaca cattacttgc ttcgcaatgc cgcatacata
    11821 acagaatatc tgcggcctcc aacacccctg catcagaact gacgcccagt ttcgacatca
    11881 cattaaattt atgtgcacgg atcgttttga tattgcgttt aagctgctcg gcaatttgtg
    11941 tcattgagta gccacgcgac ataaagcgca atatttctct ctccgtcggg cttagcgtcc
    12001 ggctttggtt aatgtaccac tgattgttca gtcggtcggt cgcctgacgt acaccattta
    12061 atgacaaaaa gagttcctga tgaaaaatct ccagcgttga cgctttactt aatacaccgt
    12121 ccagcggtga tggcgacaat gaaccaatca gccgagcttc aatatcatca tccgcaataa
    12181 ctaaacgccg ggtacgcgga aacttaatcg ccagttcagt caggcaagat aatccctctc
    12241 tgcgctcact tctcatggca gaaaaagaaa aatgaccgcc gcaaatgaga tccgcgacat
    12301 ggcatcctga aatgactcct gactggtata ggtatggagc ttataagggt tacccgcaaa
    12361 ctttctgaat aaactctcaa taccgatact gctcatgacg catttttcta tgagtgcgac
    12421 atttctcttc ttaattcggc tgtgttccat tctgcggcat ctccataaac agaaggcaag
    12481 ttaagttctc ttgcaccctg cgcgctattt atccatgcat acatttcagc gttgctgtga
    12541 attgccagtc gacgcatcgc actgtttttt tgggcgctga tagttttatt acttttctta
    12601 agcaacgaaa ctatctggtt gatgccccat ccttcaccta atagccgcag taccttgcgc
    12661 tctgaaagag tgagaatgac ggagcgatag ctaaaatcat gagtttcatt cattgccgga
    12721 gaggtcagca tggcgctgat acgctctgcg tgcgtattgc cggaacgtac ggtcttgacc
    12781 agattctcaa tgggttcaac atcagacaat aacgtcgccg tagggcacat gagcaattct
    12841 actgcctggg aataccagga gcgtgacacc atgaaaaccc agtgaatttc ccgatattgt
    12901 gagattaaag aataataatg ttcacaaaca gaacgtggat cttcactttc accggctaaa
    12961 tcagcaatga ctaatccgga acgacgtaat tgtaataagg taaagtcctc cgcagaggcg
    13021 ctggatatta tttcatattc agggaagtga gtcctcatga cctcttttaa ccctgcttgc
    13081 ataacaggta ttttactgat aacaattcca tttttgcagc atcctggcaa catatttcct
    13141 ccacatccac tgtctaaaaa tcatgatggt ttattcagga tattcattcc ttaaatgttt
    13201 ccagcaaatt aatagattaa gcgaataaat tatccttagc attcactttc atatcagcat
    13261 actcctgctg cacaacaact ccactgcatg tgtcagaagg ttagcatcaa atgataacct
    13321 ggtgaaatag cctggagaca tttaaaatat ctacattaag ttgttaggaa tacttaatga
    13381 aaaacagaaa tcacattcat ttaatttata attaaatgat atcccttccc gcagaatgaa
    13441 aagtcacaca accaatattt attcaatgaa atctgatggt tttaacttgt taacattaaa
    13501 aaacgtgccc ggttatctat tatcctgatt cgtaaaggcc aaacaataaa ttcattatag
    13561 tgataatatt catgtgatag tttgtttgcg gcgagagata attcgctttt tatcaccgag
    13621 cttgtcccga taaccaggat taatcagcgc aattttgatc ttaacctacc gcaaaacaac
    13681 cgtgcttcat gatacaaatg gattctcatt atctgaacaa tacgcagcac gtctatgaca
    13741 aagggcgagt tatgcaaact gagcaacagc gagccgtaac acggctttgt atccagtgtg
    13801 gattatttct tttgcaacat ggtgcggaaa gcgcgttggt tgatgagctt tcctcacgac
    13861 tgggtcgggc gttggggatg gacagcgtcg aaagttctat ctcttcgaac gccatagtgc
    13921 tgacaaccat taaagatggg caatgcctga catcgacacg taaaaatcac gatcgcggca
    13981 ttaatatgca tgtggtgact gaagtccagc acattgtgat tctggcggag caccatctgc
    14041 tggattacaa aggcgtagag aaacgattta gccaaattca gccattacgt tacccaagat
    14101 ggctggtagc cttaatggtt ggcctttctt gcgcctgttt ctgcaaactc aataaaggtg
    14161 gctgggatgg tgccatcatc accttctttg ccagtacggc cgcgatgtat atccgccagc
    14221 tgctggcaca acgtcatctt catccgcaga tcaacttttg cctcaccgct ttcgccgcca
    14281 ccaccatttc cggattgctt ttgcaacttc ccactttcag caatacaccc actatcgcga
    14341 tggccgccag cgttctgctg ctggtgccgg gatttccgtt gattaatgcc gtcgccgata
    14401 tgtttaaagg ccacatcaat accggactgg cacgctgggc gatcgccagt ctgctgacac
    14461 tggctacctg cgtcggcgtg gtgatggcac tgacgatttg ggggctacgc ggatgggtgt
    14521 gatcgagttt ctgtttgcat tggcgcagga tatgatcctc gccgccattc cagcggtcgg
    14581 ctttgcgatg gtgttcaacg ttcccgttcg ggcattacgc tggtgtgcgc tgcttggcgc
    14641 gattggtcat ggttcacgaa tgatcttaat gaccagaggg ctgaatattg agtggtcaac
    14701 ctttatggcc tccatgctgg tcggcaccat tggtattcaa tggtcgcgct ggtatctggc
    14761 gcatccgaaa gtgtttaccg tggcggctgt tatccctatg ttcccgggca tatcggctta
    14821 taccgcaatg atttcggcgg taaaaatcag ccagttaggt tacagcgaac cgttgatgat
    14881 taccctgtta accaactttc ttacagcttc atcgattgtt ggtgcgttat ccatcggtct
    14941 ttccattcct ggattatggt tgtaccgcaa gcgccctcgc gtataaaatt gcctcgctta
    15001 aagcacacgg atgagagaca gcctcctctc ctccgtgtgt tactataaaa gttatctccc
    15061 ttctcgttca tcgttccata tttgagaaac agtatgtctt ccagagtttt gaccccggac
    15121 gtcgttggta ttgacgccct ggtacacgat caccaaaccg ttctggcaaa agctgaaggc
    15181 ggtgtggttg ccgtatttgc taacaatgcc ccggcgtttt atgccgtcac gcctgcacgc
    15241 ctggctgaac tgctggcgct ggaagaaaag ctggcgcgtc cgggaagcga tgtcgctctg
    15301 gacgatcaac tctatcagga accgcaagcc gctcccgttg ctgtacccat ggggaaattc
    15361 gccatgtatc cggactggca acccgatgcc gattttatcc gcctggcggc gctatggggt
    15421 gtggcactaa gagagccggt gaccaccgaa gaactggcct cattcattgc ctactggcag
    15481 gcggaaggta aagtctttca ccatgtgcag tggcaacaaa aactggcgcg cagcctgcaa
    15541 atcggtcgtg ccagcaacgg cggactgccg aaacgagatg tgaatacggt cagcgaacct
    15601 gacagtcaaa ttccaccagg attcagaggg taacgatgaa aaacgttggc gacctgatgc
    15661 aacgcctgca aaaaatgatg cctgcccata tcaaacctgc attcaaaacg ggtgaagaac
    15721 tactggcctg gcagaaagaa caaggagcga tccgctccgc cgctctcgaa cgtgaaaatc
    15781 gggcgatgaa aatgcagcgc acctttaacc gctccggtat tcggccactg catcagaact
    15841 gctcctttga gaactatcgc gttgagtgtg aagggcagat gaatgcgtta agcaaagcgc
    15901 gccagtacgt cgaagagttt gacggcaaca tcgccagctt catcttttct ggtaagccag
    15961 gaaccggcaa aaaccatctg gcggcggcaa tctgcaacga gctgctgcta cgcggtaaat
    16021 ccgtattgat catcaccgtg gccgatatta tgtcggcgat gaaagatacc ttcaggaata
    16081 gcggtaccag tgaagaacaa ctgcttaacg atctgagcaa cgttgatctg ctggtgatcg
    16141 atgagatcgg cgtgcagacc gaatcgaaat acgaaaaagt gatcatcaac cagatcgtcg
    16201 atcgccgctc ttcttccaaa cgcccaaccg ggatgctgac caacagtaat atggaagaga
    16261 tgaccaagtt gctgggcgaa cgcgtgatgg accgtatgcg cctgggtaac agtttgtggg
    16321 tgatcttcaa ctgggatagc taccgtagcc gggtaacagg taaagagtat taatccccgt
    16381 ttctggcggt atactgcgac acaattccac cttgagtaat gatgatggaa actgttaaac
    16441 atcttctgtg ctgtgccatt gccgccagcg cattaatttc caccggggtg catgctgcgt
    16501 cctggaaaga tgcgctctcc agcgccgcca gcgaacttgg caaccaaaac agcacgacac
    16561 aggaaggcgg ttggtcgctc gcgtcattaa ctaacttgct tagcagcggg aaccaggcct
    16621 taagcgcaga taacatgaac aacgccgcag gcattctgca atactgcgcg aagcaaaagc
    16681 tggcgtcggt aaccgatgcc gaaaacatca agaaccaggt gctggaaaag ctgggcctga
    16741 acagtgaaga gcaaaaagaa gacaccaact atctggatgg cattcagggt ttgctgaaaa
    16801 ccaaagatgg tcagcaactc aatctggata acatcggaac gactccgctg gcagaaaagg
    16861 tgaaaaccaa agcctgcgat ctggtgttaa agcaggggct gaacttcatt tcctgaaccg
    16921 cgaaacgccg cgttttagct gttacccggc tgacgcggct ctctcctgcc cttttccctg
    16981 cttctggacg gttttccccc tgttacacgg gaagcgaccg cgatcaaaaa agtctgttta
    17041 taaactaatt cctaacaaca tcgcattttt ttgacactag aattgcagca atatggcgac
    17101 gccattacat tgttcttctc aaaaagctta aacgttggct aaacggcccg gtttagtgag
    17161 gatcgcccgt tgtcagaact actctctttc gccctttttc tcgcctctgt gctgatttac
    17221 gcatggaaag cgggacgtaa cacctggtgg tttgcagcca cattaacggt gctggggcta
    17281 tttgtcgttt taaatatcac cctgtttgcc agcgactatt ttactggcga tggtattaac
    17341 gacgcggttc tctatacctt aaccaacagc ctgaccggtg ctggcgtcag caaatacatc
    17401 ctgccgggta tcggcattgt gctggggctg acagcggtgt tcggtgcgct gggctggatc
    17461 ctgcgccatc gtcgccatca tccgcaccat tttggttaca gcctgctggc gctcttactg
    17521 gcgctgggtt cggtggacgc cagcccggca tttcgtcaga taacggaact ggtgaaatcc
    17581 cagtcacgcg atggcgaccc ggactttgcg gcttattata aagagccgtc gaaaactatc
    17641 cctgacccga aactcaacct ggtttatatc tacggcgaaa gtctcgagcg gacctatttt
    17701 gataacgaag ctttcccgga tctcacgcct gaactgggcg cgttgaaaaa tgaaggcctg
    17761 gatttcagcc acacgcagca gctgccagga acggattaca cgattgcggg catggtggct
    17821 tctcagtgcg gcataccgct gtttgccccc tttgaaggca acgcctccgc ctctgtctcc
    17881 agcttcttcc cgcagaacat ctgtctgggc gatatcctga aaaactcggg ttatcagaac
    17941 tatttcgtgc agggcgcgaa tctgcgtttt gccggtaaag atgtgttcct gaagtcgcat
    18001 ggcttcgacc acttatacgg ctcagaagag ctgaaaagcg tggtggccga cccgcactat
    18061 cgcaacgact ggggattcta cgacgatacc gttctcgatg aagcgtggaa aaagtttgaa
    18121 gagctttccc gctcaggtca gcgattctca ctgtttaccc tgacagtcga tacccatcac
    18181 ccggatggtt ttatctcgcg tacctgtaac cgcaaaaaat atgattttga cggtaagccg
    18241 aaccagtcat tcagcgcggt aagttgcagc caggagaata tcgcggcgtt tatcaacaaa
    18301 atcaaagcgt caccgtggtt taaagatacc gtcatcgtcg tctcttctga ccatttagcg
    18361 atgaacaaca cggcgtggaa atacctcaat aagcaggatc gcaataacct gttttttgtc
    18421 attcgtggcg acaagccgca gcaagagacg ctggcagtga agcgtaacac gatggataac
    18481 ggcgcgacgg tgctggacat tctcggtggc gataactatc tcggacttgg tcgtagcagt
    18541 ttatccgggc agtcgatgtc ggaaatcttc ctcaatatca aagagaaaac attggcgtgg
    18601 aagccggata tcatccgcct gtggaaattc cctaaagaga tgaaagagtt caccatcgac
    18661 cagcagaaaa acatgattgc cttctcgggt agccatttcc gtttgccgct gctgttgcgg
    18721 gtttcagaca aacgcgtgga accgctgccg gaaagcgaat actcagcacc gctgcgtttc
    18781 cagctggccg atttcgctcc acgcgacaat ttcgtctggg ttgaccgttg ctataagatg
    18841 gcacaactct gggctccgga actggcactc tccaccgact ggtgtgtctc gcaagggcag
    18901 cttggcggtc agcaaattgt tcaacatgtt gacaaaacaa catggcaggg caaaacggca
    18961 tttaaagata cggtcatcga catggcgcgt tataaaggca atgtcgatac gctgaaaatt
    19021 gttgataacg atattcgcta caaagccgac agtttcatct tcaacgtcgc cggtgcgcca
    19081 gaagaggtga aacagtttag tgggatttcc cgtccagagt cgtggggccg ctggtccaac
    19141 gcgcagctgg gcgatgaagt aaaaatcgag tacaagcatc cgctgccaaa gaaatttgac
    19201 ctggtgatta ccgccaaagc atacggcaat aacgccagcc gtcctattcc ggtacgcgta
    19261 ggcaatgaag aacaaaccct tgtgctgggc aatgaagtga ccaccaccac actgcatttc
    19321 gataacccaa ccgatgccga cacactggta attgtgccgc cggaacctgt ctcaaccaac
    19381 gaagggaata tcctcggaca ctcgccacgt aagctcggga tcggcatggt ggaaattaaa
    19441 gtggtggaac gtgaaggata attcctgact gatgtgtagg tcgcataagg tgcgacctac
    19501 acaccttctg cggcctacaa aacatcattg agaaacagaa aaaaacagcg cccaacactt
    19561 ccccggacgc tgcatggcaa ctttaataat ctcgccttat cagaaagtaa ttacaccctt
    19621 aatcaactca cgattgttaa tcacatcgcg ctcgtaggtt tctgccagcg tggcgaacgg
    19681 atagcgatgg gttaacatca tgtcagcagt gatttttcct tccgccatca gtcgaccgac
    19741 tttagcaaaa tcttccggcg tggcgttgcg gctacccatc atcgtcgttt cttttttatg
    19801 gaattccgga tcggagaact gcaactcacc tttaaacagg ccgacaaata ccaccgtgcc
    19861 gccgtgacga atcaaattca cggtgttatt catcgcatgt tgattacctg tcgcgtcgat
    19921 cactttctgc gccagcgaac caccaaactg cgcccgtagc tgcgcgtcaa aatcttcggc
    19981 tgacgggtcc agtaaaggta attccagacg cgttgccaca tgttcacggc gcgccggact
    20041 ggtatccgcc accaccacct gtgcgccatc ggctttagcg attgccgccg cgcccagacc
    20101 gattggcccc gccccgacca ccagcacctg ctcgccggga gcaatggctg cgcgacgcac
    20161 cgcatgagcg ctaatagcga aaggttcaat caatgctgcc gcctgcgggt caataccgtc
    20221 tgcgggcaaa atgttcgcca ccggcacgct caaatactca ctaaaaccgc catcctgatg
    20281 cacgccaatg actgaaattt tttcacagca attggtacgc ccgcttttac acgccgggca
    20341 ttgctgacag gcaacataag ggatcacagc aacttgcaga ccatttttaa gatcagcaat
    20401 atttttaccc agcctaacaa tctccccaca tatttcatgg cctaaaacac gtggataact
    20461 aaaaaatggt tgatttccac cccaggcatg aatatcggta ccgcaaatcc cgacagactt
    20521 aatttttatt aatgcttcat tgtcacccgg aataggtatc tcgcgttgtt tccagactaa
    20581 ttctttcggc tgctggcaaa ttaaaacatt catcgtagac atgattcggc tctccatttt
    20641 ttgttgcctt agatatcaat gaaaatgaaa aatggcagcg gaacggaaaa tctgttttgt
    20701 gaaaacacac gcataaaaat gttttaaatc gggttttaat ggactcacaa ggaggaaaat
    20761 atgagtcgtt cacaaaattt acgccacaat gtgattaacc aggtcattga tgatatggcg
    20821 cggggtcata tcccttcccc acttccatcg caaagtgcgc tggcggaaat gtacaacatc
    20881 agccgcacca cagtgcgtca tattctcagc catttacgcg aatgcggcgt cttgacgcag
    20941 gttggaaacg actatgttat tgcgcgtaaa cctgaccacg atgacggttt cgcctgtact
    21001 accgcttcaa tgagtgaaca aaacaaagtg tttgagcagg cttttttcac gctgataaac
    21061 cagcgccagt tacgcccagg ggaaactttt tctgaactgc aactggctcg ggccgcgggt
    21121 gtcagcccgg tggttgtaag agaatatctt ttaaaattcg gccgttataa tcttattcaa
    21181 agcgaaaagc gcggccagtg gagcatgaag caattcgatc aatcctacgc cgagcagctg
    21241 tttgagctac gcgaaatgct cgaaacacat tcacttcagc actttctcaa cctgcctgat
    21301 catgatcccc gctggctgca ggcgaaaacc atgctcgaac gtcatcggct actgcgtgac
    21361 aacatcggca atagctttcg catgttctcg caacttgaca gagattttca ctccttactg
    21421 ctttcagctg ccgacaatat cttttttgat caatcgcttg agatcatctc agtcatcttt
    21481 cattttcact atcaatggga cgaaagcgat cttaaacagc gcaatatcat tgccgtcgat
    21541 gagcatatga ccattctcag cgctctgatt tgccgcagtg acctcgatgc cacccttgcg
    21601 ctccgtaacc atttgaattc agctaaacaa tcaatgattc gatccattaa tgagaacacg
    21661 cgttatgctc attaagtacg gattaaaaac agcaaactat tagcgggtgc acggttttat
    21721 caaaagataa ataccgggaa attcccgctt acctatgctc acaatcagtc gactaaaaat
    21781 gtttttgtga gcggtagtaa agtcctaaaa ctttaacctg ccgttaatgt caaccttgcg
    21841 taatgcacaa ttacgtaaac aattaaaatt ataaatacag gagtccggcg tggaaaaaga
    21901 aaatatcacc atcgatccgc gttcttcatt tactccatct tcgtcggcag atattcccgt
    21961 gccaccagat ggattagttc aacgcagtac ccgaattaaa cgcattcaaa ccaccgccat
    22021 gttgttatta ttttttgcgg cggtaatcaa ttatctcgac cgcagttcgc tgtcggtagc
    22081 aaatttaacg attcgtgaag aattgggatt aagtgccact gaaatcggcg ctttgctctc
    22141 cgtgttttca ctcgcttacg ggattgcgca acttccttgc ggcccactat tggatcgtaa
    22201 aggcccacgc ctgatgctgg gactggggat gttcttctgg tcactgttcc aggcaatgtc
    22261 tggcatggtg c
//
LOCUS       DAJVUK010000061        20995 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.061, whole genome shotgun sequence.
ACCESSION   DAJVUK010000061 DAJVUK010000000
VERSION     DAJVUK010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20995
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.061"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(230..775)
                     /gene="hemG"
                     /locus_tag="OQQ57_002112"
     CDS             complement(230..775)
                     /gene="hemG"
                     /locus_tag="OQQ57_002112"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HCS1956877.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQ
                     WENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMSSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAQLTNKPTLK"
     gene            complement(787..2238)
                     /gene="trkH"
                     /locus_tag="OQQ57_002113"
     CDS             complement(787..2238)
                     /gene="trkH"
                     /locus_tag="OQQ57_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HCS1956878.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            complement(2277..2891)
                     /locus_tag="OQQ57_002114"
     CDS             complement(2277..2891)
                     /locus_tag="OQQ57_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HCS1956879.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGIGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE"
     gene            complement(2891..4222)
                     /gene="pepQ"
                     /locus_tag="OQQ57_002115"
     CDS             complement(2891..4222)
                     /gene="pepQ"
                     /locus_tag="OQQ57_002115"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HCS1956880.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRS
                     FKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHASVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFSGIRIEDNVVIHENNVENMTRDLKLA"
     gene            4412..6622
                     /gene="fadB"
                     /locus_tag="OQQ57_002116"
     CDS             4412..6622
                     /gene="fadB"
                     /locus_tag="OQQ57_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
                     /protein_id="HCS1956881.1"
                     /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIG
                     VLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPRSSFLVPEEQLSQWLHFANSVF
                     NRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVR
                     MPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDW
                     KAKRQPKLEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEA
                     LNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGG
                     IAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTL
                     DYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERP
                     ENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNR
                     VLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAG
                     FPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQ
                     PKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWL
                     NTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA"
     gene            6632..7795
                     /gene="fadA"
                     /locus_tag="OQQ57_002117"
     CDS             6632..7795
                     /gene="fadA"
                     /locus_tag="OQQ57_002117"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HCS1956882.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCN
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(7987..8688)
                     /gene="fre"
                     /locus_tag="OQQ57_002118"
     CDS             complement(7987..8688)
                     /gene="fre"
                     /locus_tag="OQQ57_002118"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HCS1956883.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDYQIVVDIPYGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLSELEALSLKHP
                     GLRVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(8734..10227)
                     /gene="ubiD"
                     /locus_tag="OQQ57_002119"
     CDS             complement(8734..10227)
                     /gene="ubiD"
                     /locus_tag="OQQ57_002119"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HCS1956884.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGVPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRDGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            10394..10882
                     /gene="rfaH"
                     /locus_tag="OQQ57_002120"
     CDS             10394..10882
                     /gene="rfaH"
                     /locus_tag="OQQ57_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HCS1956885.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            complement(10879..11661)
                     /gene="tatD"
                     /locus_tag="OQQ57_002121"
     CDS             complement(10879..11661)
                     /gene="tatD"
                     /locus_tag="OQQ57_002121"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HCS1956886.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAVQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDFTPKPSS
                     RRNEPAHLHHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(11703..12479)
                     /gene="tatC"
                     /locus_tag="OQQ57_002122"
     CDS             complement(11703..12479)
                     /gene="tatC"
                     /locus_tag="OQQ57_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HCS1956887.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            complement(12482..12997)
                     /gene="tatB"
                     /locus_tag="OQQ57_002123"
     CDS             complement(12482..12997)
                     /gene="tatB"
                     /locus_tag="OQQ57_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HCS1956888.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELIQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            complement(13001..13270)
                     /gene="tatA"
                     /locus_tag="OQQ57_002124"
     CDS             complement(13001..13270)
                     /gene="tatA"
                     /locus_tag="OQQ57_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HCS1956889.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            complement(13349..14989)
                     /gene="ubiB"
                     /locus_tag="OQQ57_002125"
     CDS             complement(13349..14989)
                     /gene="ubiB"
                     /locus_tag="OQQ57_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HCS1956890.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            complement(14986..15591)
                     /gene="ubiJ"
                     /locus_tag="OQQ57_002126"
     CDS             complement(14986..15591)
                     /gene="ubiJ"
                     /locus_tag="OQQ57_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HCS1956891.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK"
     gene            complement(15605..16360)
                     /gene="ubiE"
                     /locus_tag="OQQ57_002127"
     CDS             complement(15605..16360)
                     /gene="ubiE"
                     /locus_tag="OQQ57_002127"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HCS1956892.1"
                     /translation="MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            complement(16455..17882)
                     /gene="rmuC"
                     /locus_tag="OQQ57_002128"
     CDS             complement(16455..17882)
                     /gene="rmuC"
                     /locus_tag="OQQ57_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HCS1956893.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQPNDEAYQRDDEYNQQSR"
     gene            complement(18023..18784)
                     /gene="udp"
                     /locus_tag="OQQ57_002129"
     CDS             complement(18023..18784)
                     /gene="udp"
                     /locus_tag="OQQ57_002129"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HCS1956894.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            19046..19858
                     /locus_tag="OQQ57_002130"
     CDS             19046..19858
                     /locus_tag="OQQ57_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HCS1956895.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGMHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS"
     gene            20252..20912
                     /gene="hcp"
                     /locus_tag="OQQ57_002131"
                     /pseudo
     CDS             20252..20912
                     /gene="hcp"
                     /locus_tag="OQQ57_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001680647.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         5121 a         5663 c         5269 g         4942 t
ORIGIN      
        1 ccgcttcgct ttttctcagc ggcgcggggt gtgcataata cgctttcccg ctacagagtc
       61 aagcattttt ttgcttttct ctgttgagat tctcaggaga accccgctga cccggcggcg
      121 tgtttgccgt tgttccgtgt cagtggtggc gcattatagg gagttattcc ggcctgacaa
      181 gaggaaattt aaaataattt tctgaccgcg cactttttat tctttatgct tatttcagcg
      241 tcggtttgtt ggttaactgg gcgatttctc gggcgaaatt cgccacctgc tcccaatcgg
      301 tatagacaac ttctttgcgc gtatccgttt caccgcctga catcttcata atcagcttaa
      361 tcataaaacg gtcgtaccag cgataacgtg ggtaacgcag cgccccggca atgaccgcgc
      421 agcgatcggg acgccattgt gaactcatca gaaacttgcg cgcgtagctg ttggtctgtg
      481 gagtacgctt ctccggtttg cgcgccacca ggtttacgga ataaaaggcg ctcggcatcg
      541 aattcagtcg cgtcgcatgt tttttgacaa attcctggaa cgcagagtgg tagtgaccat
      601 agcgaataga agcaccaatg accacacggt catagttttc ccattgtggt tcttcaatgc
      661 ggtgcacatt ggcgacatcc gtctggatcc ccagttcttt cagttccgaa gccaggtagg
      721 aggcaatctc gcgcgtttgt ccgtcccttg ttgagaaaag aattaatgtt ttcacgtatt
      781 actccatcat tcacgccaga aagtcggggt aaagagcacc agcaatgtaa agacctcgag
      841 acgaccaaac agcatgttgg caatcaggat ccatttagcc accgggttca tactggtaaa
      901 gttatcagca accacgccaa gccctggccc caggttattc aatgtcgcaa caactgaggc
      961 aaaggcagaa aaatcatcca cgcccgtggc gataatcgcc agcatactga caataaacac
     1021 caatgcatag gcggagaaaa atccccaaac ggcttcgagg atacgttccg gcagtgcgcg
     1081 attccccagc ttaatgctat agacggcgtt cggatgcacc agtcgtttca gctcacggtt
     1141 cccctgctta aacagcagca ggatgcggat cactttcagg ccaccgcccg ttgacccggc
     1201 gcaaccgccg ataaaagctg aacataaaag cagtaccggc aaaaagagcg gccagcgggc
     1261 aatgctgtca gtcgtaaacc cggcggttgt cgccatcgat accacctgga aaaacgcctg
     1321 gttaattgtc atcagcgccg aactgtagac attatgaaac cacagtacga gtgtacaaat
     1381 aaccaccagc gtaaactgta cgccgataaa catgcgaaat tccggatcgc gccaataaac
     1441 cttcagacta cgcccactta acagtgaaaa gtgcagaccg tagttacaac cggagatcag
     1501 caggaagata gcaatgatag tgttaatagt cggactgtcg aaataaccga tactggcatc
     1561 atgtgtcgag aagccgccaa tagcgatagt cgcaaagcta tggccgatgg catcaaaggc
     1621 atccattccg gcaaaccaca acgccagcgc acaggcgacg gtcagcaaga cataaatcaa
     1681 ccacagggtt ttcgccgttt ccgcaattcg cgggcgcatt ttgttatctt tcagcgggcc
     1741 gggcatttct gcgcgataga gctgcatccc acccacgccg aggataggca gtatcgcaac
     1801 cgctaacacg atgatcccca tcccgccaaa ccattgcagc atctggcgat aaaagaggat
     1861 ggcatgaggg agcgaatcca gccccaccag cgtagtggcc ccggtggtgg tcaggccaga
     1921 gaaagattca aaaaacgcat cggtaatcgt gaggttcggg ctttccgaga agataaaagg
     1981 gagcgcaccg acactaccca gcacggtcca aaacagcacc actatcagaa acccctcacg
     2041 ggatttcagt tcgcccttct ctttgcggtt cggccaccac agcatagagc caatggcgag
     2101 ggcgacaaaa aaggtctggg taaaagcgcg gcccgctcca tcccggtaga tgagtgctac
     2161 cagcccaggg ataatcatgg tccctgaaaa taagatgacc agtagtccaa cgattcgggt
     2221 aatggcgcga aaatgcatct ctgccgcttc cttagttctg caaaatgaag tggggattat
     2281 tcttcaatcg ctaacaattg caatgaacca cggctaaaat ccgccagctt tgcggaaaat
     2341 tcagccactt tcgccgccgg aagcgccacc cgcagcagaa cgaatgcctg ataatcactg
     2401 ttgataattt tgccgtcaca ctgccccagc aacgcttcaa tgccggttaa ctgactatat
     2461 tcacattgca aagtatattc ggttaatggc gtcttgcgtt gggtcgttag ctggcgcagc
     2521 gcctgattca cgccgccgcc atacgctttc actaacccac cggtgccaag caatatgccg
     2581 ccgtagtagc gcactaccac agcggtaatt tccccgatgc cgctgcccat tagctgggcg
     2641 agcatcggtt tacctgccgt tcccgccggc tccccgtcgt cagagaaacc cagctgttga
     2701 gaatcatccg gcgcacccgc cacccacgcc acgcaatggt ggcgggcatc ggggtgttct
     2761 gcccgcaccg attcaacaaa cgctttcgcc gcctcaacgc catcggtatg cgccaacatc
     2821 gttatgaagc ggctcttttt gatctcttca acgaccgtga ccggtgccgc aggaattaac
     2881 cagctttcca tcacgccagt ttcagatccc gggtcatgtt ttccacgtta ttttcgtgga
     2941 tcaccacgtt gtcttcgata cgaatgccgc tgaacggttt cagtgcttca attttctgcc
     3001 agttgaagtg cttgctgaac tgcccttcac gccacggtgc cagtagcgat tcgatgaagt
     3061 agatacccgg ttcgatggtt aacaccatgc ccggctggag aatacgggtg cagcgcaggt
     3121 acggatattt tgccggtgcc gcgaggtgtg taccgctatc atcctgcata aaaccggcta
     3181 cgtcatgcac ctgcaggccc agcggatggc cgataccgtg cggcataaac ggtccggtga
     3241 gatcgttttc gaccatcgct tcttcactca tatcggtgat gatttgatgt ttacgcagca
     3301 atttggcgat gcgctgatgg aactggaggt ggtaatccac atagctgacg ccagctttca
     3361 tggtagcgat cagcgcaagt tgttcatcat ttacgtcttt caccagctgt gcgtagtcgt
     3421 tgtcgctttt tgccgaccag gtacgagtca gatcagccgc atagccgtta tattcggccc
     3481 cggcatccag caggaagctg cgcatctctt ccggtgcctg atgatccagt ttggtgtaat
     3541 gcagcaccga agcgtgttcg ttaagcgcca caatgttgct gtaaggtacg tcggtatcac
     3601 gatgaccggt cgcggtcaga taggcgatgt tgatatcgaa ctcgctcatg ccagaacgga
     3661 acgcttcttc tgccgcacga tgaccgttga ccgccatttt ctgcgcttca cgcatacagg
     3721 ccagttcgta ctcggttttg aaggagcggt agtaatgcag gtagtcgatc acccctttcg
     3781 ggttgatgtt gctggcctca atacccagtt gcagcgcacg ttccggcacc ggaccgatat
     3841 aaccgatatt gccgcgcgca gcgggcagca ggctaccaat gccatcggct ttcggcagtg
     3901 cgatcacttc cacatcttca gtccagaagg aggtcggcag cggttcgacg ttgtgccagt
     3961 aatcaaccgg cagatagaac cacagtttcg gcttgttcac gccatccacc agcaaccagc
     4021 agtttggcac ctgagttacc ggcacccacg ctttgaattg cgggttcact ttaaacggat
     4081 agggatgatc gtcgagaaaa acgttgaaca gctcgccgga gtgaataagt aatgcatcca
     4141 gcttgaagcg cgccagcgca tcgcgagtcc gttcttgtaa ggtagctata tgatttttat
     4201 agagcgaggc cagtgattcc attttttacc cttctgtttt tttgacctta agtctccgca
     4261 tcttagcaca tcgttcatcc agagcgtgat ttctgccgag cgtgatcaga tcggcatttc
     4321 tttaatcttt tatttacatg tttttaacac aaaatacaca cttcgatgca tctggtacga
     4381 ccagatcacc ttgcggattc aggagactga catgctttac aaaggcgaca ccctgtacct
     4441 tgactggctg gaagatggca ttgccgaact ggtatttgat gccccaggtt cagttaataa
     4501 actcgacact gcgaccgtcg ccagcctcgg cgaggccatc ggcgtgctgg aacagcaatc
     4561 agatctaaaa gggctgctgc tgcgttcgaa caaagcagcc tttatcgtcg gtgctgatat
     4621 caccgaattt ttgtccctgt tcctcgttcc tcgttcctcg ttcctcgttc ctgaagaaca
     4681 gttaagtcag tggctgcact ttgccaatag cgtgtttaat cgcctggaag atctgccggt
     4741 gccgaccatt gctgccgtca acggctatgc gctgggtggt ggctgcgaat gcgtgctggc
     4801 gaccgattat cgtctggcga cgccggatct gcgcatcggt ctgccggaaa ccaaactggg
     4861 catcatgccg ggctttggcg gttctgtacg tatgccacgt atgctgggcg ctgacagtgc
     4921 gctggaaatc attgccgccg gtaaagatgt cggcgcggat caggcgctga aaatcggtct
     4981 ggtggatggc gtagtcaaag cagaaaaact ggttgaaggc gcaaaggcgg ttttacgcca
     5041 ggccattaac ggcgacctcg actggaaagc aaaacgtcag ccgaagctgg aaccactaaa
     5101 actgagcaag attgaagcca ccatgagctt cactatcgct aaagggatgg tcgcacaaac
     5161 ggcggggaaa cattatccgg cgcccatcac cgcagtaaaa accattgaag ctgcggcccg
     5221 ttttggtcgt gaagaagcat taaatctgga aaacaaaagc tttgtcccgc tggcgcacac
     5281 caacgaagcc cgcgcactgg tcggcatttt ccttaacgat caatatgtaa aaggcaaagc
     5341 gaagaaactc accaaagacg ttgaaacacc gaaacaggcc gctgtactgg gcgcaggcat
     5401 catgggtggc ggcattgctt accagtctgc gtggaaaggc gtaccggttg tcatgaaaga
     5461 tatcaacgac aagtcgttaa ccctcggcat gaccgaagcc gcgaaactgc tgaacaagca
     5521 gcttgaacgc ggcaagatcg atggtctgaa actggctggc gtgatctcca cgatccaccc
     5581 aacgctcgac tacgccgggt ttgaccgcgt ggatgttgtg gtagaagcgg ttgtcgaaaa
     5641 cccgaaagtg aaaaaagccg tactggcaga aaccgaacaa aaagtacgcc cggataccgt
     5701 actggcgtct aacacttcaa ccattcctat cagcgaactg gccaacgcgc tggaacgccc
     5761 ggaaaacttc tgcggaatgc acttttttaa cccggtacac cggatgccgt tggtagaaat
     5821 tattcgcggc gagaaaagct ccgacgaaac catcgcgaaa gttgtcgcct gggcgagcaa
     5881 gatgggcaag acgccgattg tggttaacga ctgccccggc ttctttgtta accgcgtgct
     5941 gttcccgtat ttcgccggtt tcagccagct gctgcgcgac ggcgcggatt tccgcaagat
     6001 cgacaaagtg atggaaaaac agtttggctg gcctatgggt ccggcatatc tgctggatgt
     6061 cgtgggcatt gataccgcgc atcacgctca ggctgtcatg gcagcaggct tcccgcagcg
     6121 gatgcagaaa gattaccgcg atgccatcga cgcgctgttt gatgccaacc gctttggtca
     6181 gaagaacggc ctcggtttct ggcgttataa agaagacagc aaaggtaagc cgaagaaaga
     6241 agaagacgcc gccgttgaag acctgctggc agaagtgagc cagccgaagc gcgatttcag
     6301 cgaagaagag attatcgccc gcatgatgat cccgatggtc aacgaagtgg tccgctgtct
     6361 ggaagagggc attatcgcca ctccggcgga agcggatatg gcgctggtct acggcctggg
     6421 cttccctccg ttccacggcg gcgcgttccg ctggctgaac accctcggta gcgcaaaata
     6481 cctcgatatg gcacagcaat atcagcacct cggcccgctg tatgaagtgc cggaaggtct
     6541 gcgtaataaa gcgcgtcata acgaaccgta ctatcctccg gttgagccag cccgtccggt
     6601 tggcgacctg aaaacggctt aaggagtcac aatggaacag gttgtcattg tcgatgcaat
     6661 tcgcaccccg atgggccgtt cgaagggcgg tgcttttcgt aacgtgcgtg cagaagatct
     6721 ctccgctcat ttaatgcgta gcctgctggc gcgtaacccg gcgctggaag cggcggccct
     6781 cgacgatatt tactggggtt gtgtgcagca gacgctggag cagggtttta atatcgcccg
     6841 taacgcggcg ctgctggcag aagtgccgca ctctgtcccg gcggttaccg tcaatcgctt
     6901 gtgtggttca tccatgcagg cactgcatga cgcagcacga atgatcatga ctggcgatgc
     6961 gcaggcatgt ctggttggcg gcgtggagca tatgggccat gtgccaatga gtcacggcgt
     7021 cgattttcac cccggcctga gccgcaatgt cgccaaagcg gcgggcatga tgggcttaac
     7081 ggcagaaatg ctggcgcgta tgcacggtat cagccgtgaa atgcaggatg cctttgccgc
     7141 gcggtcacac gcccgcgcct gggccgccac gcagtcgggc gcatttaaaa atgaaatcat
     7201 cccgaccggt ggtcacgatg ccgacggcgt cctgaagcag tttaattacg acgaggtgat
     7261 tcgaccggaa accaccgtgg aagccctcgc cacgctgcgt ccggcgtttg atccagtaaa
     7321 cggtacggta acggcgggca catcttctgc actttccgat ggcgcagctg ccatgctggt
     7381 gatgagtgaa agccgcgccc atgaattagg tcttaagccg cgcgctcgtg tgcgttcgat
     7441 ggcggtcgtt ggttgtaacc catcgattat gggttacggc ccggttccgg cctcgaagct
     7501 ggcgctgaaa aaagcggggc tttctgccag cgatatcggc gtgtttgaga tgaacgaagc
     7561 ctttgccgcg cagatcctgc cgtgcattaa agatctcggg ctaatggagc agattgacga
     7621 gaagatcaac ctcaatggtg gtgcgatcgc gctgggtcat ccgctgggct gttccggtgc
     7681 gcgtatcagc accacgctgc tgaatctgat ggaacgcaaa gacgttcagt ttggtctggc
     7741 gacgatgtgt atcggtctgg gtcagggtat tgcgacggtg tttgagcggg tttaaccact
     7801 tgccggatgc ggcgtgaacg ccttatccgg tctaccgatc ctgcaccaat gtaggcctga
     7861 taagacgcgc cagcgtcgca tcaggcatcg tgcaccgatt gccggatgcg acatagatct
     7921 aaatgccact gaataaagtt ttagttgccg ttcttcccgc ctgtcagggg cgggtttttt
     7981 tatatctcag ataaatgcaa acgcatcgcc aaacagacga tcttcccgcg cattacgctc
     8041 actgcaaaac aggtcacgag caattttcgc catctcaaaa cgtccggcaa tatagatatc
     8101 atgctctgcc agcgtaccat gatcctgcaa gaccgccgtt aacacggtgc cagtacgccc
     8161 acgccagccc gcttccggtt gttcaaccac cggcaccaca cgcaggccag gatgcttcag
     8221 cgaaagcgcc tcaagctcgg agagatcata aagatgttgc tcctcacgcc caccccagta
     8281 aatggtgata tcgcgattgg gattacgcgc caacgccgtc aataaaatcg agcgcgcata
     8341 ggagaacccg gtgccgcccg caatcaaaat catcggacgc tcttcatcat cgcgcagcca
     8401 cgcttctccg tagggaatat cgaccacgat ttgataatct ttgaggatgc ggtccatgac
     8461 tgctttcgcg taaaggttga tttcagaagc gccaatatgc agctctataa accctttttc
     8521 atccggcgtc gaagccattg aaaacggacg tttgtcgcgc tcatccatca ctaccatcaa
     8581 atactgacca gcacgaaaag aaaaggccgc gtctggcacg atgcggacac gatatacggt
     8641 atccgtgata gcttctaccg aggtcacttt acagcttaag gttgtcatgc gctttctctg
     8701 tcggatcgat aaatagggca aaacaaacgc gcatcaggcg cttttaccgt tgttaaaaat
     8761 agccagttca tcccagatgg cgtcaatatg cgcgacaaca tctggatctt ttttgatggg
     8821 acgtccccat tcacgctggg tttcccccgg ccatttattc gtggcatcca gccccatttt
     8881 tgaacccagc ccggagacag gcgaggcaaa atccagataa tcaataggcg tattttctac
     8941 cagaacagta tcccgcgccg ggtccatacg ggtggtaatc gcccaaatca catcgttcca
     9001 gtcgcgtgcg ttgacgtcat catcgcaaac gatcacaaat ttagtgtaca taaactggcg
     9061 taagaacgac cagacgccca tcatgacgcg cttcgcgtgt ccggcgtact gttttttgat
     9121 cgtcactacc gccagacgat aagaacagcc ttccggcggc aggtaaaaat cgacaatttc
     9181 cgggaactgt ttttgcagaa tcggtacaaa cacttcgttc aacgccacgc ccagtaccgc
     9241 gggctcatct ggcggacgcc cggtataggt ggaatggtaa atcgcatctt cacgctgggt
     9301 aatatgcgtc acggtaaata ccgggaaact atcgacttcg ttatagtaac cggtgtggtc
     9361 gccatacggc ccttccggcg cagtttcgcc ttgttcgata tacccttcca gcacaatctc
     9421 cgcactggcg ggcacttcaa ggtcattgga gatacacttc accacttcgg tcttggtacc
     9481 gcgcagcaat ccggcaaacg catactctga aagtgtatcc ggaacggggg tgactgcacc
     9541 gagaatcgtg gcgggatcgg cacccagcgc cacagaaacc gggaaacgtt cgcccggatg
     9601 cgccgcacac cactcctgat aatccagcgc gccgtcgcga tgcgacagcc agcgcataat
     9661 cagtttgttt ttaccaatca gctgctggcg ataaatgccc agattctgcc gctctttatg
     9721 cgggccgcgc gtcactgtca gcccccaggt aatcagcggt gcggcatctt ccggccagca
     9781 ggtcataatg ggaatgcgat tgagatcgac gtcatcgcca gagacgattt tttgttggca
     9841 gggcacacca cgcagccgct ttgtcggcat gttcaatact tgcttaaact gcggcagttt
     9901 atcaaacagg tcgcggaaac cttttggcgg ctccggctct ttcagaaacg ccaataattt
     9961 accaacttca cgcagcgccg aaacatcttc ctgtcccatg cccatcgcca cgcgctttgg
    10021 cgtaccgaac aggttgcaca gcaccggcat tgagtagcct ttagggtttt cgaacaacag
    10081 cgcaggccca ccggcacgca aagtgcggtc agcaatttca gtgatttcca gatgcggatc
    10141 caccgggagc gtgatacgtt ttagctcacc ctgctgttca agcagcgtca agaagtcgcg
    10201 taaatcgtta tatttcatgg cgtccattgt agcctcttaa tctacgccca ttatacggcg
    10261 ttcatctttg cgatgctgta aatttgttaa attagcgtga actctgacgg tataacgcaa
    10321 accggggaat ataattaact tagcgtaaag cttttgctat ccttgcgccc cgattaaacg
    10381 gataagagtc attatgcaat cctggtattt actgtactgc aagcgcgggc aacttcaacg
    10441 tgcccaggaa cacctcgaaa gacaggctgt gaattgcctg gcaccgatga tcaccctgga
    10501 aaaaatcgtg cgtggaaaac gtactgcagt cagtgagcca ttgtttccca actacctgtt
    10561 tgtcgaattt gatccagaag tgattcatac cacgactatc aacgcgaccc gcggtgtcag
    10621 ccacttcgtg cgctttggcg cgtcgccagc gatagtccca tcggcggtga ttcatcagct
    10681 atcggtatat aaaccgaaag acattgtcga tccggcaaca ccttatccgg gtgataaggt
    10741 gattattacc gaaggcgcgt tcgaaggctt tcaggccatt ttcaccgaac ccgatggtga
    10801 ggctcgttcc atgctattgc ttaatcttat taataaagag attaagcaca gtgtgaagaa
    10861 caccgagttc cgcaaactct aaaacgcaat cccaaacagt gttttgacat tggcatccgt
    10921 ggtggcagcc agccatgcgg catcttctcc acgccagtgc gcaatacgtt gcaaaatatg
    10981 gtgcagatgg gctggctcgt tgcgccggga tgatggcttt ggcgtgaaat cgcgcgggag
    11041 cagatacggc gcatcagttt cgatcagcaa tttctccgcc ggaatcaacg gtaacaattc
    11101 ccgcagctcc agcccgcgtc gttcatcgca aacccaaccg gtaatgccga tataaattcc
    11161 acgcgccacg cacgcctgca tctcttcgcg tgtgccggta aagcaatgaa gaaccgcacc
    11221 aggcagttta tccagccacg gctccagcaa tgtcataaac cgctcgtggg catcgcgaca
    11281 gtgcataaat accggcatgt ttaattctgc ggcaatgcgt agctgagcaa caaaagcgcg
    11341 ttcctgctct tccggcgtcg aaaagttgcg gttaaagtcg agaccacatt caccaatcgc
    11401 caccacttct ggctgcacgg ccagctcaat aatcgcttct tcagtcgcag cttgccactg
    11461 gctgctgtcg tgaggatgta cgcccgccgt tgaccaacag gacgaatact gacgcgccag
    11521 cttttgcgcc tgctggcttt cacgcaggtt agtgccggtg atgagtagcc cattaactcc
    11581 cgcgtcaaaa gcgcgcgcta caacatcatc acggtctttc gcaaattgcg aactggtcaa
    11641 attaacgccg atatcaaaca tcctgtactc catatgacaa ccgccctgac gggcggttga
    11701 atttattctt cagttttttc gctttctgct tcagcgtcgt tttcctcttc ccgatttcgc
    11761 cctttaccaa cgtaaaagcg tgagaagaag acaccgattt caaacagaca gtacatcggg
    11821 atcgccaata gcgtttgcga gaagacatcc ggcggcgtca gcaacatccc gacaacgaat
    11881 gcaccaacca gcacatacgg gcgttttttg cgtaagtctt ctggcgaggt aatccccatc
    11941 cagcacagca gcacaattgc caccggcact tcaaaggaga caccaaacgc cataaacagc
    12001 gccataacga agcttaaata gctggcgatg tcggtggata cctgcacccc ttccggcgcg
    12061 gtattggcaa ggaagccaaa tgccagcgga aagaccacaa agtaggcgaa tgccatgccg
    12121 atataaaaca gcagagagct ggaaaccagc agcggcacca ccaggcgacg ttcatgctta
    12181 tacagcgctg gggcgataaa tgcccacacc tgatagagaa tcaccggcgc tgacagaatc
    12241 agcgacacca taaaggtcag cttgatcggc gtaaagaacg gcgaggccac gtcggtggcg
    12301 atcatcgttg aaccttgcgg caactgcttg atcaatggcg cggataccag gtgatagatg
    12361 tcattggcga aatagaccag acacaggaat atcacgatca ccgcgataat gcagttcagc
    12421 agacgcttac gcagctcaat tagatgcgtg ataagcggtt gagtatcttc tacagacatg
    12481 tttacggttt atcactcgac gaaggggaag gtgcagcggt tttcggttca gcgtccgcag
    12541 caggttttac caccggctct ggcgtggttt ctggcttctg ttccggcgaa ctggcctgcg
    12601 tttgtgcagc ggcaggcgtt acgccctcat gcgcagcttc attatctttc accaccgggt
    12661 tatggatggt gtgcgcttca tcgctcgcct tttctggatc gtttgcaacg taggaacgct
    12721 tcatcgactc cgcggcctgg cgtagttcat ccatcgacgc tttcagttcg ggcgtcaggt
    12781 tagtgaggct cgccttttca acctttttca gactgtcctg aaactcctgg agttttaact
    12841 cctggatcag ttcgttctgc accgttgtcg ccagtgaacg caacgcgcga atccagcccg
    12901 ctaccgtttt taccgccaca ggcagtcgtt gcggccccag aacgacgagg ccgatgatga
    12961 acaccaatag cagttcgcta aaaccgatat caaacacgga ttacacctgc tctttatcgt
    13021 ggcgcttcgc gtcttctgtt ttagcctgtt cctgattcgt atccgcctgc ttatcggcga
    13081 tagttttcgc agtaaaatca gcatcctgac tggttttatc ctgctttggt tcatcatcgc
    13141 tcattgcttt tttaaagcct ttgatcgacg caccaagatc ggaaccgatg gagccgagct
    13201 ttttggtgcc aaaaagcagt acaacgatga cggcaataat caataactgc caaatactga
    13261 taccacccat acatgttcct ctgtggtaga tgatgattaa acaaagccgc attatacgtt
    13321 acacggcccg ccttgagcga tgaaaaaatc agcgtgtttt gcgccaaccg acaaaccagg
    13381 cgatcagacc acctgccatt aaccagccgg gcatcagccc ccactcaggt cggctgacca
    13441 acaagaatgt gccacttaat actaacgtag cgccaattcc gagaaaataa cgcgattgtc
    13501 cctgacgtac atgatttgac tgaagctcgc gggcaatctt atcaacactg tgctgtaaat
    13561 acttgccctg gcgcaaactg tcgtaaacca attcaggcag ttctggcatt ttttcgaccc
    13621 agaacggcgc tttttcttta aatgctctca ccagcgcagg aataccgacc tgatctttaa
    13681 tccacgactc caggaaaggc ttcgctgttt tccataaatc gagctgcgga taaagctggc
    13741 gtcctacccc ttcgacatag agcagggttt tctggagtaa caccagttgc ggctgcactt
    13801 ccatattgaa gcgacgcgcc gtattaaaca gatttaacag tacatgtcca aacgaaattt
    13861 cggccagcgg tttctcaaag ataggttcac agaccgtacg aatggcaaat tcgaactctt
    13921 caacgttggt atctggtggc acccagcctg aatcgacgtg tagctctgcc actttgcgat
    13981 agtcgcgatt aaagaaggcg ataaagtttt ctgccagata gcgtttatct tctttgttta
    14041 gcgagccaac aatcccgcaa tcaatgccga tatatttcgg gttttccggg tgttcatagc
    14101 ttacgaagat gttgccaggg tgcatatcgg catggaaaaa gctgtcgcga aagacctgag
    14161 tgaagaacac ctgcacgccg cgttccgcca gcaatttcat gttagtgccg tttttctcca
    14221 gcgccgcaac atcagacacc ggaatgccgt aaatgcgctc catcaccatc atcccttcac
    14281 tacaatagtc agggtaaact tccgggatgt agagcatcgg gctgtcttca aaattgcgcc
    14341 gaagctgaat ggcgttggca gattcccgca gcaaattcag ttcatcaatc aaggtctttt
    14401 cgtactcgcg caccacttcg gttgggcgca gacggcgacc atccggcagc aaacgcggca
    14461 cccagcgagc cagacggtag ataagtttca gatccgcttt aatgaccggc aaaatatccg
    14521 ggcggatgac tttaatcacc acctctttac cattcgattt caatcgcgcg gtatgaacct
    14581 gggcgataga agcagaagcc agcggcttga tttcaaaatc gtcaaaccac gcttctaccg
    14641 gcaagccgcc cattgcagct tcaatctgct gcttcgccag cttgccatca aacggagcta
    14701 ctttgtcctg caataacgcc agctgatcgg caatatgcgg tggaaaaaga tcgcggcggg
    14761 ttgataacat ttgcccgaac ttgatccaaa ccggccccag ttcttgcagg gccagtcgta
    14821 gtcgctcacc taaaagtttg tctttatgcc gatttggcat ccagaataat gagtatcgcc
    14881 atagccgtag cggcagggtg atacgcattt tggggatcag ttcatcaagt ccgtagctta
    14941 aaaaagtgcg aatgatgaaa tataggcgcc gtacttcacc tggcgtcatt tagcctccag
    15001 tttttccagc cgtttggtca gggcatcaac agcacgctcg acggcagccg tctcttccgc
    15061 aaaccaggcc acttcaagcg gaccgggtgc catacgccac tcttcagtaa tggcttccgc
    15121 cacataacgt tgctggcgct taatgccgtg atgcaggaac tttgcgcctc cgcgcatggc
    15181 tttgctgatt ccttcagcgg cgatatcacc ggtataaggg gccagcagtt ccgcagggtc
    15241 gaactctgcc agatctgcca gcgcaacgaa gttttgcacc acctgaatat cgccctgcac
    15301 ttccagctca ccactgcgaa tcagtgcggt aagctgctgg cgatcgcgaa gtttcggcaa
    15361 cacactggcg taggcgataa cggtgcagtc agcatcgcct gcccattcgc ccagtacatc
    15421 aacctggcgt tcgctgaaca ccagaatcaa tgacgtcgaa aagcctttta cctccacgcg
    15481 caatacttta cccagcagac gcgagcgggc tgttttcagc gcgggtgagc gatacaggaa
    15541 ggtgttgagc agactttcaa ttcctgccgt cactaaaggt ttaaaaggca tttccggtct
    15601 cctgtcagaa cttataacca cgatgcagcg ccacaacccc tgccgtcaga ttgtagtagt
    15661 cgacactttc gaatccggca tcctgcatca tggctttcag ggtatcctga tcgggatgca
    15721 tacggatgga ttctgccaga taacggtagc tgtcggcgtc gttcgcgacc agtgagccaa
    15781 tacgcggcag cacatggaag gagtatgcat cataggcttt gctcagcggc tcgataattg
    15841 gcttcgagaa ctcaagcacc agcaggcggc cgccgggttt cagcacgcga tacattgaac
    15901 gcagtgcttt atctttgtcg gtgacgttac gcagaccaaa cgaaatggtg atgcaatcaa
    15961 aggtgttatc cgggaacggc agcgcctcag cgttcgcctg aacatactca acgttgccaa
    16021 tcacaccgat attacgcagc ttctcgcgtc ccattttgag catggattca ttgatatcag
    16081 caaggaccac tttgccagtt tctccgacca ggcgggagaa tttcgctgtc aggtcgccgg
    16141 tgccaccagc cagatccagc acggtctgcc cacggcgtac gccgctgcaa tcaatcgtga
    16201 atcgcttcca caaacgatga ataccaaatg acatcaaatc attcatgaca tcgtattttg
    16261 atgccacgga atggaaaacg tgggcgacca tatccgcttt ttgttccttc gcgacggtct
    16321 gaaaaccaaa gtgcgtcgtt tcttgtgact tatccaccat ctcaatgcct gctcatcaaa
    16381 aaattgttcc agaagtgtaa cagattgggc gtcgatgccc tagatttcta cccggcttaa
    16441 ctacccctaa tgggctagcg cgactgctga ttatattcat catcgcgttg ataagcttca
    16501 tcattcggct gctccggaac cgaccgaagt cgatactctt catcctggct caccgcctgt
    16561 tcagccaaat ccggattaat ctcgcgttta atttctactc ctaaaccgcg aaacgcttct
    16621 gcctgcgcca gcacatttcc gcgacctgaa gagagttttt tcattgcctg gcggtagtta
    16681 tcctgcgctt tgtcgagact ttgaccaatc gcggacatgt catcgatgaa caaacgcatc
    16741 ttgtcgtaca gcttgctggc acgatcggcg atttgctggg cgttgcggct ttgatgctca
    16801 taacgccaca ggttggcaat agtacgcaac gccaccagca gcgtagtcgg gctaaccagc
    16861 atgatattgt ttttcaacgc ttcggtgatc agctccggct ggcggtcaag cgccagtaaa
    16921 aaagcgggtt caacgggaat aaacatcagc acgtaatcca gagttcgcag ccccggcagc
    16981 tgttgataat ctttgcgtcc cagcaaacgg atatggttac gcaccgacgc gatatgttcc
    17041 tgtagcgcgc tttcgcgggt gtagtcgtct tcggcgttaa aatagcgttc ataggcgacc
    17101 agcgtcattt tggcgtcgat caccacatct tttccctgcg gcagccgcac gatgacatcc
    17161 ggctgcatcc gcgagcgggc gtcattttcg atgctgacct gggtttcata ttcataccct
    17221 tcacgcagac cggaagcctc cagcacccgc gtcaatacta cctcgcccca gttgccctgg
    17281 gttttattgt cgcctttcag cgcgcgcgtc aggttgatcg cttcctgggc catttgcgcg
    17341 ttgagttgct ggagattgcg aatttcgtgg gtcagggtat ggcgttcttg tgcttcttta
    17401 ccgaagctgt cctgaacctg acggcggaaa ccgtccagtt gttcacgtag cggcgacaac
    17461 aggctgttca gactctgacg gttttgctca tcaacccggc gattgctgtg ctcaaaaata
    17521 cggttggcga ggttttcaaa ctgctcactg aggcgctgct cgctgttaat catctggcga
    17581 attttatcgt cagcatgttg ctgtgcggct tccatccgcg tggttacttc acgcagatcg
    17641 gcctccagag aggtgttaat actttgcagg ctgcgcactt cgttattgag taactcgcac
    17701 tctgcacgcc agtgctcgct ttgggtaatt tgttgttttg ccgcgcttaa ctccgcgacc
    17761 atctcttcac gttcagctaa ttgctcggct ttttgctgcg catgttgata actggcaaac
    17821 agccagccaa ttgccacacc caccaacgca ataactgcgt aaaccatgat tgagaaatcc
    17881 acaacgcctc ctgacgcaac aacttacccg cacaaaatag aattgtgctg tacaaacgtc
    17941 cagttggaaa ggcatttcct gcgaggcgct acgcaaaaat acaaaaggcc gaacgcgtcg
    18001 gccttcagac aggagaagag aattacagca gacgacgcgc cgcttccacc acgattttca
    18061 ccgcttggct ttcagtttgt ttcatcgtct cagcattcgg gatctcttgc tgggtgcggt
    18121 taacgataac acccgctacc ataccggcac gcaggccctg acttgcacac atggtcagca
    18181 gggttgcaga ttccatttca tagttcatta cgcccatcgc ctgccactct tccatagaac
    18241 ctttaaagtg acgaactacg cgaccagagt aagtatcgta acgttcctgg cctgggtaga
    18301 aggtatcaga agaagctgtc acgccaacgt gagttgtcgc gccaatggat ttcgcagctt
    18361 caaccagcgc agtcgtacat tcgaaatcag cgacagccgg gaattccagc ggtgcgaagt
    18421 gcaggctcgc gccatccaga cggacagacg ccgtggtaac caggacatca cccacattaa
    18481 tatgcggctg aatagcgccc gttgtaccga tacgcaggaa ggtgcgaatg cccagctgtg
    18541 ccagctcttc aacagcaata gaggtagacg ggccgccgat accggtagag cagacgataa
    18601 caggtttacc atccagctct gcacgccagg tggtgaattc gcggtgagat gccagcttaa
    18661 ccggcttatc catcagcgcg gcgatctttt ccacacgatc cgggtcgcca gggacgatgg
    18721 caagcgtagc cccttgtaaa tcgtttttag tgaggccgag atgaaaaaca tcagacttgg
    18781 acatatacaa ctcctctgtg aatcggttta gtcagaagaa gcaaaaagac actttaccga
    18841 agggtttaac attttttcgt gatactcatc accatgacgc aaatgcgttg cataaattta
    18901 cccaccaaaa gtgatgcaaa tcacataaat cactcttcat tctgcaggac tgcataaaag
    18961 atgagccgat tcaggcaatg tgatttgttg catgctgact atagttaaca ttgcgcaaca
    19021 tttttataag ggtacggaga ataccatggc aacaacacaa caatctggat ttgcacctgc
    19081 tgcatcgcct ctcgcttcga ccatcgttca gaccccggac gacgcgattg tggcgggctt
    19141 cacctctatc ccttcacaag gggataacat gcctgcttac catgccagac caaagcaaag
    19201 cgatggccca ctgccagtgg tcattgtagt gcaggaaatt tttggcatgc atgaacatat
    19261 ccgcgacatt tgtcgccgtc tggcgctgga ggggtatctg gctatcgcac ctgaacttta
    19321 cttccgcgaa ggcgatccga atgattttgc cgatatcccc acgttgctta gcggtctggt
    19381 agcaaaagtg cctgactcgc aggtgctggc cgatctcgat catgtcgcca gttgggcttc
    19441 ccgcaacggc ggcgatgttc atcgtttaat gatcaccgga ttctgctggg gtggacgtat
    19501 cacctggctg tatgccgcgc ataatccaca gctaaaagct gcagtggcgt ggtacggcaa
    19561 actgacgggc gacaagtcgc taaattcacc gaaacaacct gttgatatcg caaccgatct
    19621 taacgcgccg gttctcggct tatatggtgg tcaggataac agcattccgc aggagagcgt
    19681 tgaaaccatg cgccaggcgc tgcgggctgc taatgcgaaa gcagagatta tcgtgtaccc
    19741 ggacgccggg catgcattca acgctgatta tcgcccgagc tatcatgccg aatctgcgaa
    19801 agatggctgg cagcgtatgc tggaatggtt taagcagtat ggtgggaagc ggagttagtt
    19861 tcctcttagt ctatatttga gatggtgagt gaacgagtgc gttttgctgc catctctgtc
    19921 ccccaaaaaa taatcagtat gaattgattg gagattacga ctccgctatt tgaccttaag
    19981 aaggtcggca agtcatagtc ataaatgagt ctcttcaatg gaagacacct tagagattta
    20041 ccatctactc ccattcacaa acaaacatta attattatca acacattcac attaattata
    20101 aatcatctca gaccttcctg ataaaaagat attaaagtga aacattttgt ttttcacatt
    20161 ttagttcatc acttttaggc gtaaataaag gtaaaaaaaa caacaatact atttctcttt
    20221 cacaaaagaa ttaacaaaag gttttttaag gatgagtgat attatttact tgaccataac
    20281 cggagaacaa caaggatgta tttcctctct ttgtggaacg agcgcatcaa taggtaatcg
    20341 ctggcagatt ggccatgaag atgaaatctt cgcgttctcg ctctctaata gtattacgaa
    20401 tgcaggcaaa gggtcacaat tgcatggcct tagtttctgt aaattcttat taacgctatt
    20461 aacaataacg agcagttgtt catggcgttt gacttctatc ggatcaatag atttggtcga
    20521 tgggagaaat attacaacat tcaactccgc ggcgcgctct tatcagcaat caatcacctg
    20581 tttactgaga acaatctgga tacagaagcc atcactgtca gttatgaata tatactctcc
    20641 aggcatctga ttgctaatac tgaatttagt tatttggcat ttcccgataa ctacaaccgt
    20701 ctgtttatac cacggccaaa aactaaagct ggtaatggtt caaaacactt aatagtaaag
    20761 cggttggcag actgcttgct gctggcggca tatacaatgg gaatatcgaa ggattcaggg
    20821 aaacagcaga caagttgggg ggagatgcac ctgctggtta cgatcaattt atggataaca
    20881 aagggttact catcgctggt gcttcaatag ttgctggagc agttctgggg agaatgagac
    20941 tccctgattt ggaatcactt gagcatttcg gagccagagg agcagtatca ggaag
//
LOCUS       DAJVUK010000062        20742 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.062, whole genome shotgun sequence.
ACCESSION   DAJVUK010000062 DAJVUK010000000
VERSION     DAJVUK010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20742
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.062"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..271)
                     /locus_tag="OQQ57_002132"
     CDS             complement(<1..271)
                     /locus_tag="OQQ57_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956896.1"
                     /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
                     ITAPVVCHHCEEAPCLQVCPVNAISQRDDAILRCTGNSGHYHLFFF"
     gene            complement(524..994)
                     /gene="bcp"
                     /locus_tag="OQQ57_002133"
     CDS             complement(524..994)
                     /gene="bcp"
                     /locus_tag="OQQ57_002133"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HCS1956897.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(994..1566)
                     /locus_tag="OQQ57_002134"
     CDS             complement(994..1566)
                     /locus_tag="OQQ57_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HCS1956898.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            1712..2590
                     /gene="dapA"
                     /locus_tag="OQQ57_002135"
     CDS             1712..2590
                     /gene="dapA"
                     /locus_tag="OQQ57_002135"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HCS1956899.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            2607..3641
                     /gene="bamC"
                     /locus_tag="OQQ57_002136"
     CDS             2607..3641
                     /gene="bamC"
                     /locus_tag="OQQ57_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HCS1956900.1"
                     /translation="MAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGD
                     TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAAN
                     AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            3854..4567
                     /gene="purC"
                     /locus_tag="OQQ57_002137"
     CDS             3854..4567
                     /gene="purC"
                     /locus_tag="OQQ57_002137"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HCS1956901.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKRFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQLD"
     gene            4735..5598
                     /locus_tag="OQQ57_002138"
     CDS             4735..5598
                     /locus_tag="OQQ57_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HCS1956902.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            5613..7628
                     /gene="tmcA"
                     /locus_tag="OQQ57_002139"
     CDS             5613..7628
                     /gene="tmcA"
                     /locus_tag="OQQ57_002139"
                     /EC_number="2.3.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cytosine(34) acetyltransferase TmcA"
                     /protein_id="HCS1956903.1"
                     /translation="MAELTALYTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALL
                     GDWLWISPQPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQYFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
                     ATLRGRRVSRIAVHPARQREGVGQQLIASALQYTQDLDYLSVSFGYTGELWRFWQRCG
                     FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYCLRRDAQALAQWNGETLPVD
                     PLNDIVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
                     LCTTLKLAGRKMLLVRQREEAAHALFALNDVRTERLRDRITQWQFFH"
     gene            7702..8400
                     /gene="ypfH"
                     /locus_tag="OQQ57_002140"
     CDS             7702..8400
                     /gene="ypfH"
                     /locus_tag="OQQ57_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311362.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCS1956904.1"
                     /translation="MKHDHFVVQSPDKPVQQLLLLFLGVGDNSVAMGEIGSWFAPLFP
                     DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
                     NATALIGFSQGAIMALESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
                     VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL
                     SGGKPGDDDVIEMM"
     gene            complement(8510..8710)
                     /locus_tag="OQQ57_002141"
     CDS             complement(8510..8710)
                     /locus_tag="OQQ57_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HCS1956905.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(8738..9865)
                     /gene="dapE"
                     /locus_tag="OQQ57_002142"
     CDS             complement(8738..9865)
                     /gene="dapE"
                     /locus_tag="OQQ57_002142"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HCS1956906.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(9869..10225)
                     /locus_tag="OQQ57_002143"
     CDS             complement(9869..10225)
                     /locus_tag="OQQ57_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HCS1956907.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPSIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
     gene            10606..10665
                     /gene="ypfM"
                     /locus_tag="OQQ57_002144"
     CDS             10606..10665
                     /gene="ypfM"
                     /locus_tag="OQQ57_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HCS1956908.1"
                     /translation="MIERELGNWKDFIEVMLRK"
     gene            complement(10764..13872)
                     /gene="acrD"
                     /locus_tag="OQQ57_002145"
                     /pseudo
     CDS             complement(10764..13872)
                     /gene="acrD"
                     /locus_tag="OQQ57_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
     gene            complement(14035..15735)
                     /gene="narQ"
                     /locus_tag="OQQ57_002146"
     CDS             complement(14035..15735)
                     /gene="narQ"
                     /locus_tag="OQQ57_002146"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HCS1956909.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQHLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
                     "
     gene            15941..17920
                     /gene="aegA"
                     /locus_tag="OQQ57_002147"
     CDS             15941..17920
                     /gene="aegA"
                     /locus_tag="OQQ57_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
                     /protein_id="HCS1956910.1"
                     /translation="MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITV
                     IKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTM
                     QIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLR
                     TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRAD
                     QAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITG
                     RVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIG
                     AGPAGLACADVLTRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGI
                     HFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK
                     QVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPG
                     SKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEG
                     SEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGG
                     DAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH"
     gene            17988..18563
                     /gene="nudK"
                     /locus_tag="OQQ57_002148"
     CDS             17988..18563
                     /gene="nudK"
                     /locus_tag="OQQ57_002148"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HCS1956911.1"
                     /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
                     GNGATILLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
                     EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
                     SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD"
     gene            18689..19732
                     /locus_tag="OQQ57_002149"
     CDS             18689..19732
                     /locus_tag="OQQ57_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HCS1956912.1"
                     /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR
                     NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDK
                     WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
                     SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
                     DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQ
                     ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
                     HGPDAWPTLWITR"
     gene            complement(19842..20742)
                     /locus_tag="OQQ57_002150"
                     /pseudo
     CDS             complement(19842..20742)
                     /locus_tag="OQQ57_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311354.1"
                     /note="catalyzes the formation of ribose 5-phosphate and
                     xylulose 5-phosphate from sedoheptulose 7-phosphate and
                     glyceraldehyde 3-phosphate; can transfer ketol groups
                     between several groups; in Escherichia coli there are two
                     tkt genes, tktA expressed during exponential growth and
                     the tktB during stationary phase; frameshifted;
                     incomplete; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase"
BASE COUNT         5018 a         5300 c         5550 g         4874 t
ORIGIN      
        1 aaaaaaagaa taaatggtag tgtccgctat tgccagtaca cctcaggatc gcatcatccc
       61 tctgggagat ggcattgacc gggcagacct gcaggcaagg ggcttcctca cagtgatgac
      121 acacgacagg ggcagtgatt gttgacgtct tcgccagggc caggcgcggg tgttgctgta
      181 aaccttgcgt tttatgcacg tccgaacagg cagcgagaca ggtattacat cctgtacacc
      241 acagtggttc ggccaccaca aagcggttca tgtcggctcc ttgaaaatga tatgaaacat
      301 tgcatttcat attgcataaa ggatgccagt ctgattaatt taatatattc aataaattat
      361 gtattaacag ggttctgaac ggtacaaaaa tgatggtcat taacgttcag caaaaaatgg
      421 attcgacacc cgtgtcgcag gggaaagcga gaatgtgatc ttgatcacga gaagtgaggt
      481 gtgctgaccg caagcgcagc cagcacggaa tggagcaaag taatcaggcg tgttctttca
      541 gccagttcag cacaacgtcg tggtgattgc tggttttaaa atcgtcaaag acatgttcga
      601 ttttgccatc agcgtcaatc aggaagctga tgcgatgaat accatcgtag gttttgccca
      661 tgaaggactt ttcaccccag acgccgaatt gttcgcacac ctggtggtcc tcatcagaca
      721 ggagcgtaaa gttaagcagc tctttttccg caaaacggga gagtttttcg ggtttatcgg
      781 tgctgatacc cagcacatca acgcccgctt ttttcaactc atccatgtta tcgcgtaagc
      841 cgcaggcctg tacggtacag ccgggggtca tggctttcgg gtagaaataa accagaacac
      901 gctgtccctg gaagtcggtc aaattaactt gttctccgtc ttgatccggc aagctaaatt
      961 tcggtgcgat atcaccggct ttcagtggat tcattactta actccatcct gttcatcatg
     1021 ttgggaataa ttgacgacgt taatactgcc ttgtgcattg agttctgtac atagggcttt
     1081 gaacgcttgc tcaatatttg ctgcgtccgc agatgcgggg ctgtgggcgg tgatctgaat
     1141 atgcaactgc gcagcccgtt cattttcagc aggttgcgtg cgcgacacca gctccgcaat
     1201 gttcatatga tgcgcgtcga aaagtgctgt gaagcgttca attaaatgcg gggagtctgc
     1261 aacatcgacc tgaacccaga cagatgctgg cattggcgga cgcggacgcg ccgtcgtgcg
     1321 cttcatcacg attaaaagat ccagttcggc acctttcaac ggtaacgttg attcaatcag
     1381 agtaatggca ttccatgaac cggaaagcag catgataaac gtgaactctt ctcccagcat
     1441 cgccaggcga ctgtcttcaa tattacagcc gcaactactg acatgacggg tgatggtgtt
     1501 cacaattcca gggcgatcgg cacccaacgc agtgatcacc agataatgtt gcgatgacag
     1561 tgtcaaactg gttattcctt taaggggtga gttgttctta aggaaagcat aaaaaaaaca
     1621 tgcatacaac aatcagaacg gttctgtctg cttgctttta atgccatacc aaacgtacca
     1681 ttgagacact tgtttgcaca gaggatggcc catgttcacg ggaagtattg tcgcgattgt
     1741 tactccgatg gatgaaaaag gtaatgtctg tcgggctagc ttgaaaaaac tgattgatta
     1801 tcatgtcgcc agcggtactt cggcgatcgt ttctgttggc accactggcg agtccgctac
     1861 cttaaatcat gacgaacatg ctgatgtggt gatgatgacg ctggagctgg ctgacgggcg
     1921 cattccggtg attgccggga ccggtgctaa cgctactgcg gaagccatta gcctgacgca
     1981 gcgcttcaat gacagcggta tcgtcggctg cctgacggta accccttact acaatcgtcc
     2041 gtcgcaagaa ggtttgtatc agcatttcaa agccatcgct gaacatactg acctgccgca
     2101 aattctgtat aatgtgccgt cccgtactgg ctgcgatctg ctcccggaaa cggtgggccg
     2161 tctggcgaaa gtaaaaaata ttatcggaat caaagaggca acagggaact taacgcgtgt
     2221 aaaccagatc aaagagctgg tttcagatga ttttgttctg ctgagcggcg atgatgcgag
     2281 cgcgctggac ttcatgcaat taggcggtca tggggttatt tccgttacgg ctaacgtcgc
     2341 agcgcgtgat atggcccaga tgtgcaaact ggcagcagaa gggcattttg ccgaggcacg
     2401 cgttattaat cagcgtctga tgccattaca caacaaacta tttgtcgaac ccaatccaat
     2461 cccggtgaaa tgggcatgta aggaactggg tcttgtggcg accgatacgc tgcgcctgcc
     2521 aatgacacca atcaccgaca gtggtcgtga gacggtcaga gcggcgctta agcatgccgg
     2581 tttgctgtaa agtttaggga gatttgatgg cttactctgt tcaaaagtcg cgcctggcaa
     2641 aggttgcggg tgtttcgctt attttattac tcgctgcctg tagttctgac tcacgctata
     2701 agcgtcaggt cagtggtgat gaagcctacc tggaagcggc accgcttgcg gagcttcatg
     2761 ccccggctgg aatgattttg ccggtgacct ccggtgatta tgcaatcccg gtgaccaacg
     2821 gtagtggtgc tgtcggtaag gcgctggaca ttcgtccacc agcccagccg ctggcactgg
     2881 tttctggcgt gcgtacccag ttcacgggcg ataccgcttc attgctggtg gaaaatggtc
     2941 gtggcaatac tctgtggccg caggtggtta gcgtgctgca ggcgaaaaac tacaccatca
     3001 cccaacgtga tgatgctggt cagacactga ccatcgattg ggtacaatgg aaccgtctgg
     3061 acgaagacga gcagtatcgt ggtcgttatc aaatctctgt taagccgcag ggttatcagc
     3121 aggcggttac ggttaaactg ctgaacctgg aacaggcggg caaaccggtt gcagacgcgg
     3181 cttccatgca gcgttacagc acggagatga tgaacgttat ttccgccggt ctggataaat
     3241 ctgcctctga cgccgcgaac gctgcgcaaa atcgtgcctc caccactatg gacgtacaaa
     3301 gtgcagctga tgacaccggt ttaccgatgc tggtcgtacg cgggccgttc aatgtggttt
     3361 ggcaacgtct gccagcggcg ctggaaaaag tgggcatgaa agtgaccgac agcacccgtt
     3421 cgcagggtaa catggccgta acttataagc cgctgtctga cagcgactgg caggaactgg
     3481 gcgcgagcga tccaggcctg gcatccggtg actataaatt gcaggttggc gatttagata
     3541 accgcagcag cctacagttc atcgatccga aaggtcatac tctgactcag agtcagaacg
     3601 acgcgctggt agctgtcttc caggctgcgt ttagcaagta aaaatatagg gctggagtca
     3661 tccggccctt ttttctgata tgatacgcaa acgtgtgcgt cggcagaaaa atgcaatttt
     3721 agcggtaatt cgcacgaaat ttgtttgtcg gacgtaggtc ggataaggcg ttcttgccgc
     3781 atccgacaaa acatccggca caccagacag caaaagattt taaaacgtta attcacaccc
     3841 aggagtgata aagatgcaaa agcaagctga gttgtatcgt ggtaaagcga aaaccgtata
     3901 cagcacggaa aacccggacc tgttggtgct cgaattccgc aatgatacgt cagcagggga
     3961 tggcgcgcgc attgagcagt ttgatcgcaa aggtatggtg aacaacaagt tcaactactt
     4021 cattatgagc aaactggctg aagcgggtat cccgactcaa atggagcgtc tgctctccga
     4081 taccgaatgt ctggtgaaaa agctggatat ggtgccggtt gagtgtgtcg tgcgtaaccg
     4141 tgctgctggc tctctggtga aacgtcttgg aatcgaagaa ggtattgagc tgaacccgcc
     4201 gctgttcgat ctgttcctga aaaacgatgc catgcacgat ccgatggtca acgaatctta
     4261 ctgcgaaacc tttggctggg tgagcaaaga gaacctggcg cgtatgaaag agctgaccta
     4321 caaagcgaac gacgtgctga aaaaacggtt cgatgatgct ggtctgattc tggtcgactt
     4381 caagctggag tttggtctgt acaaaggtga agtggtactg ggcgatgagt tctccccgga
     4441 cggcagccgc ctgtgggaca aagaaacact ggagaaaatg gacaaagacc gtttccgcca
     4501 gagcctcggt ggcctgatcg aagcctatga agccgtcgcc cgccgcctgg gtgtacagct
     4561 ggactgattt ttctgttcat catcttgccg tgcagctggc acggcaagac aaccgctctc
     4621 ggaatatatg cattgaacgc tcattcctcc gccatttcat cccgctttcc tgtggtaatc
     4681 ttcctctgaa ccacctacga tcatttctat aatgaatata ttgttgaggt atctatgcgt
     4741 tggcaagggc gacgtgaaag tgacaatgtt gaagacaggc gcaacagctc cggtggtccg
     4801 tctatgggcg gtcccggttt tcgcctgcca agcggtaaag gcgggctgat tttactgata
     4861 gtcgtgctgg ttgcaggcta ctatggtgtt gatttaaccg ggttaatgac tggacagccg
     4921 gtttcccaac aacaatcaac gcggtccatt agccctaatg aagacgaagc tgcaaaattc
     4981 acctcggtga ttctggcaac cacggaagac acctggggac aacagttcga gaagatgggt
     5041 aagacctatc agcaaccgaa gctggtcatg taccgtggaa tgacgcgcac cggctgcggg
     5101 gcgggccagt ccattatggg gccgttctat tgcccggcgg atggcacagt ttatatcgat
     5161 ctctccttct atgatgacat gaaagacaaa cttggcgcgg atggcgattt tgcccagggg
     5221 tacgttatcg cccatgaagt cggtcatcat gtgcagaaac tgttaggcat cgagccgaaa
     5281 gttcgtcaac tgcaacaaaa cgcgacgcag gcggaagtga accgcttatc tgtgcgtatg
     5341 gaactccagg ccgactgttt tgccggtgtc tgggggcata acatgcagca gcaaggcgtt
     5401 ctggaaaccg gcgatctgga agaggcgctg aatgcggcgc aggccatcgg cgatgaccgt
     5461 ttacaacagc aaagtcaggg gcgagtagta ccagacagtt tcacacatgg cacttctcag
     5521 caacgctaca gctggtttaa acgtggtttc gacagcggcg atccggcaca atgcaatact
     5581 tttggtaaaa gcatttaatt tccggggcag ggatggctga actgactgcg ctttacacat
     5641 taacagcgca aatgaaacgt gaagggatcc gccgcttgct ggtgttgagc ggggaagagg
     5701 gttggtgttt tgatcatgcg cttaagttgc gtgatgcctt acttggcgac tggctgtgga
     5761 tttcgccgca gccagatgct gaaaaccact gttctccctc ggcgctacaa actttacttg
     5821 ggcgcgagtt ccggcatgcg gtattcgacg cccgccacgg ctttgatgcc gctgcctttg
     5881 cggcacttag cggaacgttg aaagcgggaa gctggctggt tttgttactc cctgtatggg
     5941 aagagtggga aaaccaacct gatgccgact cgctgcgctg gagtgattgc cctgacccta
     6001 ttgcgacgcc gcattttgtc cagcatctca aacgcgtact tacggcggat aacgacgcta
     6061 ttctctggcg gcaaaaccag ccgttctcgt tggcgcattt tactccccgt actgactggc
     6121 accccgcgac cggcgcacca caaccagaac aacagcaact cttacagcag ctactgacca
     6181 tgccgccggg cgtggcagcg gtaacggctg cgcgtgggcg cggtaagtcg gcgctggcag
     6241 ggcaactcat ttctcgtatt gcgggcagtg cgattgtcac cgcgcccgca aaagcggcaa
     6301 cggatgtact ggcacaattt gcgggcgaga agtttcgctt tattgcgccg gatgccttgt
     6361 tagccagcga tgagcaagcc gactggctgg tggtcgatga agccgcagcc atacctgcgc
     6421 cgttgttgca tcaactggta tcgcgttttc ctcgaacgtt gttaaccact acggtgcagg
     6481 gctacgaagg caccggacgt ggttttttgc tgaaattttg cgctcgcttt ccgcatttac
     6541 accgttttga actgcaacag ccgatccgct gggcacaggg atgcccgctg gaaaaaatgg
     6601 ttagtgaggc actggttttt gacgatgaaa acttcaccca tacaccacaa ggcaatatcg
     6661 tcatttccgc atttgaacaa acgttatggc gaagcgagcc agaaacgccg ttaaaggttt
     6721 atcagttatt gtctggtgcg cactaccgga cttcgccgct ggatttacgc cggatgatgg
     6781 atgcaccagg gcaatatttt ttacaggcgg ctggcgaaaa cgagattgcc ggagcgctgt
     6841 ggctggtgga tgagggggga ttatctcaac aactcagtca ggcggtatgg gcaggttttc
     6901 gtcgcccgcg gggtaatctg gtggcccagt cgctggcggc gcacggtagc aatccactgg
     6961 cagcgacatt gcgtggacgg cgggtcagcc ggatagcagt tcatccggct cgtcagcgcg
     7021 aaggcgttgg gcaacagctc attgccagcg ctttgcaata tacgcaagac ctcgactatc
     7081 tttcggtgag ttttggttac accggggagt tatggcgttt ctggcaacgc tgcggttttg
     7141 tgctggtacg aatgggtaat catcgtgaag ccagcagtgg ttgctatacg gcgatggcgc
     7201 tgttaccgat gagtgatgcg ggtaaacagc tggctgaacg tgagcattac tgtttacgtc
     7261 gcgatgcgca agctctcgcg cagtggaatg gcgaaacact tcctgttgat ccactaaacg
     7321 atatcgtgct ttctgacgac gactggcttg aactggccgg ttttgctttt gctcatcgtc
     7381 cgctattaac gtcgttaggt tgcttattgc gtctgctaca aaccagtgaa ctggcattac
     7441 cggcgctgcg tgggcgttta cagaaaaatg ccagtgatgc gcagttatgt accacactta
     7501 aacttgcagg ccgcaagatg ttactggtcc gtcagcggga agaggccgcg catgcgctgt
     7561 tcgcacttaa tgatgttcgc actgagcgtc tgcgcgatcg cataacgcaa tggcaatttt
     7621 ttcactgact ccttcaattt tctcccatgg tcattgtgag ccagcggcgt aaaattaatg
     7681 acatcagtta aggagttcgc catgaaacat gaccattttg ttgttcaaag cccggataaa
     7741 cctgtgcaac agttgttact gcttttcctc ggtgtcgggg ataactcggt ggcaatgggg
     7801 gaaataggca gttggtttgc accgctgttt cctgatgcgc tggtggtgag tgtcggtggc
     7861 gcggagccga gcggtaatcc ggcggggcgt cagtggtttt cggtgcaggg tattacggaa
     7921 gataatcgcc aggcgcgtgt ggatgccatc atgccgacgt ttattgaaac ggtacgctac
     7981 tggcagaaac agagtggagt aggggctaac gccacggcgt taatcggttt ctctcaaggc
     8041 gcgattatgg cgctggagag tattaaagcc gaaccgggcc ttgcttcacg cgtcattgct
     8101 tttaacggac gctatgcgag cctgccggaa accgcgtcta cagcaacgac aattcacctg
     8161 attcatggcg gtgaagatcc ggttatcgat ctggcgcatg cggttgcggc gcaggaagcg
     8221 ttaatcagtg ccggtggtga cgtgacgctg gatatcgtgg aggatttagg ccatgcgatc
     8281 gacaatcgca gtatgcaatt tgccctggat cacttgcgtt ataccattcc gaaacattat
     8341 ttcgacgaag cgctaagtgg cggtaagcct ggcgatgatg atgtgattga aatgatgtaa
     8401 aagacagatt acctggcctg ataagacgcg tgagcgtcgc atcaggcatc gttcaccatt
     8461 gccggatgcg gcgttaacgc cttatccggc ctacggttga gcactcagct tacttcttcg
     8521 gttgatcctt tttcggccag tcgtcgtcat cgtcccactt atcgttgaaa tcacgatgcg
     8581 ggggaagctc cggcttgttg gcgagaaatt tcttgtggtc gacgcgcttg agatctttaa
     8641 tcacgttcag caggacgcct accaaaaaga caatcaccag aatccaccaa tatttagcca
     8701 gccagtccat gcttatttcc tcttgcagaa ccactcatca ggcgacgagc tgttccatga
     8761 tacgttgata catacgggca agtagctgca ggtcggcagc gttcacacat tcattaattt
     8821 tatgaatagt ggcattgacc ggcccgagtt ccaccacctg cgcccccatg cgagcaataa
     8881 agcgcccgtc ggacgttccg cctgtggtca gtagctgcgg tttaatttca ttatagtgct
     8941 caaccgcgtt aacgaccgca tccaccagtt taccgcgcgc ggtcaaaaat ggctgcccgg
     9001 aaagccacca atccaccgta tagcgcagtt gatgtttttc aagcagggca agcacctgcg
     9061 ctttgatcat ctcatcagtc agttcggtgc tgaagcggaa gttaaactgc acaaacagtt
     9121 cacccggaat aacattgtta ctgcccgttc ccgcctgaat attagcaatc tgcatactgg
     9181 tcgccgggaa aaattcattg ccctgatccc actcaatagc cactaattca ttaaggaaag
     9241 gtgctgcgcg atgtactgga ttgtcagcca gatgcgggta ggccacatgc ccctgaacgc
     9301 catgaatggt aaggttgcag gttaacgatc cgcgacgacc atttttcacc acatcaccaa
     9361 ccacttcgat actcgacggt tcgccgacca ggcagtaatc gagacgctca ttacgtgcca
     9421 tcaacgcttc gacgactttt accgtaccgt tgtgggcact ggcttcttca tcagaggtga
     9481 tcagaaatgc cagtcgcccc gtatggttgg gatgttgtgc gacaaagcgt tctgccgcta
     9541 ccaccatcgc cgccagcgag cctttcatat ctgccgcacc gcgcccgaat aacatgccat
     9601 cacgaatggt gggttcaaac ggcggattga tccaacgatc ggcgtcgcca ggcggcacca
     9661 cgtcggtatg cccggcaaag gctaacgttt caccttgccc acgccatgcc caaaaattct
     9721 gcgtatcggc aaagtccatg cgttcaacgg taaaaccgat cgcctgcaaa cgttcaatca
     9781 acaaagcctg gcatcctgcg tcatcaggac tcagggaagg gcggcgaata agctgttgtg
     9841 tcagctcaat aaccgggcac gacatagact acacctcatg gaaaaattgc tgataactgg
     9901 aatcactgaa acccagcagc ataggcttac caggcgcgca gagcaatgga cgtttgataa
     9961 ttgaaggcat ttcagtcatt aatgccgccg cagaggccgc atcggtgatt ttattgcggg
    10021 tggtttcgtc cagtttacgc caggttgtac cacgggtgtt cagtaacgct tcccagccta
    10081 attcgttgat aaaaccgttc aataattcgc tgtccagccc atcgacgcgg taatcatgaa
    10141 aacgatagtc gatgttattg gcttccagcc aacggcgagc ctttttaatg gtgtcacaat
    10201 ttttgatgcc gtaaagtgta accataatga atcctttttc gatctatgag aataaatact
    10261 catttaaggg tgaaaacatt ttgcctgcaa atgattatca ggaaatataa cattatcgaa
    10321 gtattcaaat taacaactat taaataatat taaacatttt taacgtaaac attaagaata
    10381 ttcatcttgt tatctgtctg tattttaacc agaattaaat cagtattaga tgccgtatga
    10441 atatctcgaa atgttgctgt gtatcacata caaattatca ccgcaggacc atagtattta
    10501 cataaggttt gtcccccgga ggtagtcatc gcagcaatcg agtaaattag cttcaccacg
    10561 gtatattgtt tccgtagaat acccataatt ataagagagg ttgttatgat tgaacgtgaa
    10621 ctggggaact ggaaagactt tatcgaagtt atgcttcgta agtaattcct gagacaaagt
    10681 acaaacagca agaacccgct gagcaggttc ttaatcggaa agttgaaaaa ggcgacacat
    10741 tagcatgtcg ccttttttat tgcttattcc gggcgcggct tcagcgggaa gcggcggcgc
    10801 accagtacaa agaacagcgg cacgaagtaa atagccagaa tagtggccga aatcatcccg
    10861 cccattacgc cagtacccac cgcatgctga ccaccggaac cggcacccgt gctggttgcc
    10921 attggcaata cgccgaagat aaatgccagc gaggtcatca gaatcgggcg taaacgctga
    10981 cggcaggcgt ggagcgtcgc ttcaaacagg tcgtggcctt tttggttcat ctcgttagca
    11041 aactcgacga tcaggatggc gtttttcgcc gataaaccaa tgaccgttaa caggcccacc
    11101 tggaagtaaa cgtcgttttc cagcccgcgc atccaggttg ccagcagcgc gccgataacc
    11161 cccagcggca cgaccagcat taccgagaac ggcaccgacc agctttcaac gccgccagac
    11221 acaggaatac caccagcaag gaaatggcgt acagcgccgg agcctgcgcg ccggaaagcc
    11281 gctcctgata cgacatcgcc gtccactcca gaccaaagcc gtttggcaac tgcttcacta
    11341 acgattccat tatatccatc gccgtaccgg tactgacccc cggtgcggct tccccaacaa
    11401 tctcaaccgc agaataaccg ttatagcgtt ccagacgcgg cgagccagtc tcccagcgtg
    11461 aggtcgcgaa agcagagaag ggcaccatgc cgccatcttt atttcggaca taccagagat
    11521 taatgtcatc tggcagcatg cgatacggcg cagctgcctg cacatagact ttcttcacac
    11581 gaccgcgatc cataaagtca ttcacatagc tcgaacccca ggcggtttgc agtgtgtcgt
    11641 taatatcgtc gatagcaacg cccagcgcct gagctttacg ctggtcgata tcaatctgca
    11701 actgcggact gtcatcgagg ccgttatggc gcacacgggt tagctccggg ttttccgccg
    11761 ccagcgccag caactggtta cgtgctgcca tcagcgcatc gtgacctgct ccagcgtggt
    11821 cctgcaactc catatcaaaa cccgcagaac taccaagacc gctaattgct ggcgggctgc
    11881 tggcgataac gcgagcttct ttaatcttgt taaacgcctt tgttgcacgc tcgataatgg
    11941 caaacgaggt gccggtctta ctgtcgcgtt cgctccagtc tttcaggcgg ataaacattc
    12001 gcgccacgtt ttgcccgtta cccccagggc cagaaccaac ggtggcaaac accgacatga
    12061 tgttgtcttt ttcatgggtg aagtaatatt tctcgatttg ctcaacgact ttcagggtct
    12121 gttgttgggt tgaaccgctg ggcaattgta ccgaggtagt aaacatgcca cggtcttcca
    12181 gcggtaagaa cgacgtcggc aaacgcagga acaggaacac catgccgcca agcagcagga
    12241 cataaatcac aatccagcgc aggctgcggt ggagaatttt cgccacccct ttttcgtagc
    12301 gttcggcgtt gcggttaaac atctggttaa accaggcaaa aaagcctttt tgcccgtgat
    12361 gctcaccttt tttcagtggc ttaagtagtg tggcacacag agccggagtg aggatcatcg
    12421 ctaccagtac tgacagcacc atcgccgcaa caatggtaat agagaactgg cgatagatgg
    12481 caccggtggt gccgccgaag aaggccattg gtacaaatac cgccgaaagc accatcgcaa
    12541 tcccgaccag tgccccctgg atctgcccca tcgatttacg tgtggcttcg cgaggagtga
    12601 gtccttcctc actcataata cgttcgacgt tttccaccac cacgattgcg tcatccacca
    12661 gcagaccgat cgccagtacc atcgcgaaca tggttaaggt gttgacgctg taaccgaagg
    12721 cgtaaagtac ggagaaggtt cccatcaaca ccaccggcac ggcgatagtg ggtatcagcg
    12781 tggcgcggaa gttttgcagg aacagataca taacgaggaa aaccagggcg atagcttcca
    12841 gcagcgtttt caccacgtct tcaatggagg ctttaacaaa cgaggttgtt tcatacgcca
    12901 ccttgtattc cagtccgtgc gggaagtact gcgccagctc gtcgagacga ttgagcacca
    12961 gctccctgtc gccatttcgt ttgcgccgga ggccagtttt acccccagcc cggaggctgg
    13021 cttaccattg aagcggctaa gataatcgta tttctccgcc cccatttcga cggtggcgac
    13081 atcgcccagc cttacctctg agccgtcttg attcacccgc aaggtgatat cgcggaactg
    13141 ttctggtgtt tgcagcagtg actgggcgtt aatggtggcg ttgagcgcct gcttatcgac
    13201 ggaaggtgta ccaccaagtt gcccaaccgc aatctgcgcg ttctgtgact caatggcatc
    13261 agtgacatct ttagccgtca tctggaaact gttgagtttc gccggggcca gccagatacg
    13321 catggaatat tgcgaaccat aggcatcgat atccccgacg ccattcacgc ggcttaacgg
    13381 gtcctgaata ttactggcaa cataatcggc aatatcctgt ttatccatcg aaccatcggt
    13441 agagacgaaa gcaatggtca gaatattggt atcgccggtt ttacgcaccg tcacgccctg
    13501 attttgcacc gcctgcggta actttcgcat ggctgattgc agctggtttt gtacttgctg
    13561 cacggcttcg tccggatcgg tgcctgcttt aaaacttaaa gtgacagatg cctgaccggt
    13621 gccactgctc tgagatgaca tatacatgag attatcgagg ccggtcatat tttgctcgat
    13681 aacctggggc acggtgtttt ccagcgtctg ggccgatgcg ccgggatagt tagcggtcac
    13741 tcgcacattc ggtggcgcga gatcggggta ttgttcaacg ggcaatgaaa aaatcgctag
    13801 ggtccctgtc agacacaaca ggattgccag cacccaggca aaaatggggc gatcaataaa
    13861 gaaattcgcc attaaaagag gacctcgtgt ttctgcgtat cgttgtaggc ttgacttgct
    13921 tcactgtagc ggcaaggtac gagccaatcg tggagaaaaa aggagttaat gtaaattatc
    13981 atgccctttt atactgaacc ttaagtgcaa gtattctttg gtcagtagga ggcattacat
    14041 caactgactt tcctcaccct ctgcagagcg aaagctaata ctcactaacg tgccgccgcc
    14101 ggaaggttgt gaaaaagtca gcgtcccacc cagccgttcc gcgcgttcgc gcatgatatt
    14161 cagaccataa tgaccttcgg gttctttcgg ttcaccgata ccaatcccgt tatcacggat
    14221 ataaaccgtg tgattgccgt ccggcgcggt gacgcaactg acggcgattt cgctggcgtt
    14281 ggcgtgcttc atcgcattca gcaccgcttc gcgaataatt tgcaacaaat gcacctgcat
    14341 ttgcgcatcc agcgcaaggg ttggcagacg gcagtcgagg gtcagtttgg cgctggtttg
    14401 attttgtaac gtatccagca tttccctcaa cgcggagggg agatccgcct gctgcagcgt
    14461 caggcggaaa gtagtcaaca gctcgcgtaa ctgccgataa gcatcattca acgcctggga
    14521 aaaatcggcc atgatacttt gtgcggtggc gttatcttcc ggtatcgaac gcttcagtaa
    14581 cgtcaactgg atacgtaagt aagaaagtac ctgagccagc gagtcgtgca attcgcgggc
    14641 gatggttgca cgttcttcca tcaacaataa atgctgaaaa tgcttctgcg cctgattaaa
    14701 gtacaaaccg cgtcccagca tcgacgaaac gctgttaagc agcggttctg atgatgaaac
    14761 gtgactattt tgccagtgca gttcgccgta aaccgtctct tgcattgtca ccggtaaaat
    14821 ctgcatcggc aattccgggt ttggttgccc ttcgctaatc cgccagtttt caccgacatt
    14881 taactccaga tattcagccg cttcattgtc gcgaacaatc tgcaaaatat ggcggaaaca
    14941 atgcacatca atctggcttg tgttcagcgc ctgcgaacat tgatacaaca cctccagacg
    15001 acgcttggcc tcgtggagat cgcgggtctt ttcttctact gacgcctcca gcgaaaggta
    15061 caatttatgc agctcgctcg acatctggtt aaaggttttt gcaagcagac caagctcatt
    15121 cggcagactg gtatccagcg gcggcgagtc gaactgcccg tgttcaatac gttgactggc
    15181 ggtaaccagc tgattcagcg gggcaaccac ctgatggcgt atacggcgca aagtaaaaaa
    15241 gaccagcgtg aaaataccga taccgccagc cagggaaatc gccaccacca gcagcatttt
    15301 gcgttcagcg tagtgctgta aagccagcac gaacaggtct atctgattaa cataattatt
    15361 aatattggcc tgataccacg gcaaatcgcc cttgctgagc cgattattca tctccagcca
    15421 gttggcattc agatgcgcat agcgagtttt tactgcttct ggcacatacc agacgttgag
    15481 attggttaat accggtgaat gcagtgcctg ctgaaacaac tggcgatgtg cattgagttg
    15541 tggactgcca ctttgcaagt cgtagcccag gcggtaactc tgcatacgca gcgatccggc
    15601 aatattgata gcctcagcgt cgcgcaaact gctcgccaga gttagcagag cgatacccgt
    15661 ggaaagaatc gacagcagca caatgtaaaa aaaggcccgg gccagactgg ccgagacggg
    15721 tcgtttaaca atcacacgcg tcttctccac aaaaaatcat taatgttcca gttcgctgaa
    15781 acgcaattta gtcagtgatg ggattatttg agctgccaca gtttatagcg aaatagttac
    15841 ttattctggg cacatgaaca ttgccgattc ccctgtaagt cgggtaataa caacactcat
    15901 ataaagaata aggtttttac aaccaaaaaa gaaggtcgtt atgaatcgtt ttattatggc
    15961 caacagtcag caatgtctgg gttgtcatgc ttgtgaaatc gcctgtgtca tggctcacaa
    16021 tgatgagcaa catgtcctga gccaacacca ttttcatccc cgaattacgg ttatcaaaca
    16081 tcagcagcaa cgtagtgcag tgacctgtca ccattgtgaa gatgcgccct gcgcccgtag
    16141 ctgccctaat ggcgcaatca gccacgttga tgacagcatt caggtcaatc agcaaaagtg
    16201 tattggctgt aaatcctgcg tggtggcctg tccgtttggt acgatgcaaa tcgtcctgac
    16261 acccgtcgcg gcaggaaaag taaaagccac ggcgcataaa tgcgaccttt gtgcagggcg
    16321 cgaaaacggt cctgcctgtg tcgagaattg cccggcggac gcgctgcaac tggtcactga
    16381 cgtcgcactc tccggcatgg cgaaatcccg ccgcttgcgc accgcacgtc aggagcatca
    16441 accgtggcat gccagtaccg ctgcacaaga aatgccggta atgagtaaag tcgaacaaat
    16501 gcaggcaacg cccgcgcgtg gcgagccgga taaactggcg attgaagcgc gcaaaaccgg
    16561 ttttgatgaa atttatctgc catttcgcgc cgaccaggca caacgggaag cctcgcgctg
    16621 ccttaagtgc ggcgagcaca gcgtttgtga atggacctgc ccgctgcata accatattcc
    16681 gcagtggatt gaactggtga aagccggaaa catcgacgcc gccgtcgagc tttctcacca
    16741 gaccaacacc ctgccggaaa ttaccggacg cgtttgtccg caagaccgtt tgtgtgaagg
    16801 tgcctgtact attcgcgatg agcacggcgc ggtaactatc ggcaacattg aacgctatat
    16861 ttcagatcag gcgttggcga aaggttggcg tcctgactta agtcatgtca ccaaagtgga
    16921 caagcgggtg gcgattatcg gggcaggtcc ggcagggctg gcctgtgcgg atgttctgac
    16981 ccgcaatggc gtggcggtga cggtgtacga tcgccatcca gaaatcggtg gcttgctcac
    17041 tttcggcatt ccttctttca aactggataa atccctgctg gcacgccgtc gggaaatctt
    17101 cagcgcgatg gggattcact tcgaactcaa ttgtgaagtg ggtaaagatg tctctttgga
    17161 ttcgcttttg gaacaatacg acgcggtctt cgttggcgta ggcacttacc gttccatgaa
    17221 agcgggttta cccaatgaag atgcgccggg cgtttatgac gcgctgccgt tcctcatcgc
    17281 caacactaaa caggtgatgg ggctcgaaga gctaccggaa gagccgttta tcaataccgc
    17341 cggacttaac gtcgtggtac tgggcggcgg cgacaccgcg atggactgtg tgcgtactgc
    17401 gctgcgccac ggcgcgagta acgtcacctg cgcttatcgt cgtgatgaag ctaacatgcc
    17461 aggctcgaag aaagaggtga agaacgcccg cgaagagggg gccaacttcg aatttaacgt
    17521 ccagccggtg gcgcttgagc tgaatgaaca aggtcacgtt tgcgggattc gtttcctgcg
    17581 cacgcgtctt ggcgagccgg atgcccaggg gcgtcggcgt ccagtaccgg tggaaggcag
    17641 tgaatttgtc atgccagccg acgcggtgat tatggcgttt ggcttcaatc cgcacgggat
    17701 gccgtggctg gagtcgcacg gtgtaacggt agacaaatgg ggccgcatca tcgcggatgt
    17761 ggaaagccag taccgttacc agaccaccaa tccgaaaatc ttcgccggtg gcgacgccgt
    17821 gcgtggtgcg gatctggtgg ttaccgcaat ggcagaagga cgtcatgcgg cacaggggat
    17881 tattgactgg ctgggggtaa aatcagtcaa atctcactga tagcctgcgc agacaaaccc
    17941 gacttcacag cgtaagataa ttgttcattt cgcgctgtgg agtcggtatg acgcaacaaa
    18001 tcaccctcat taaagacaaa attctctccg ataactattt caccctgcac aacattacct
    18061 acgatctcac gcgcaaagat ggcgaagtta tccgccataa acgtgaagtt tacgatcgcg
    18121 gtaatggtgc gacgatcctc ctgtacaacg cgaagaaaaa gaccgtggtt ctgattcgtc
    18181 agttccgtgt cgctacctgg gttaatggca atgaaagcgg gcagctgatt gaaacctgcg
    18241 ccgggctgct ggataacgac gaaccggaag tgtgcattcg taaagaagcg attgaagaga
    18301 cgggctatga agtgggcgaa gtgcgcaaat tatttgaact gtatatgtcg ccaggcggtg
    18361 tgactgagct aatccacttt tttatcgccg aatacagtga caatcagcgc gctaacgccg
    18421 gtggcggtgt cgaagatgaa gatattgaag tgctcgagct gccgttcagc caggcgctgg
    18481 agatgatcaa aaccggcgag atacgtgacg gtaagacggt gttattgctt aactatttgc
    18541 aaacgtcaca tttaatggac tgaaaaataa caataatatt tcgttgttta ttattggctc
    18601 aatccgacaa atccgattga gccgcgctac ctgcgcaacg aagatacgac ttgtgctgtt
    18661 tgtttgaact tctggggtcg taccgtccat gcgctatcgc attttccttc tctttttttt
    18721 cgctttgttg ccgacgtctt tggtgtgggc ggcaccagcg caacgggcgt tttccgactg
    18781 gcaggtcacc tgtaataacc aaaacttctg cgtggcgcgt aatacgggcg atcataatgg
    18841 actggtgatg accctgagcc gcagcgccgg ggcgcatacc gatgccgttt tacgtattga
    18901 gcgcggcgga ttgaagtcgc cggaggcgtc agaaggggag atagcgccac ggctgctgtt
    18961 agatggcgag ccgttggcgt taagtggtga caagtggcgg atttcaccat ggttattagt
    19021 aaccgatgat acggcaacca tcaccgcgtt tttgcagatg attcaggaag ggaaggcgat
    19081 caccttacgc gacggcaatc agaccatttc gctgagtggc ttaaaagcgg cgttgttgtt
    19141 tattgatgct cagcaaaagc gcgttggcag tgaaaccgcg tggatcaaga aaggggacga
    19201 accgccgctc agcgtaccgc ccgcgcctgc gctgaaagag gtcgcggtgg ttaacccaac
    19261 gccgacgcca ctctcactcg aagaacgcaa cgatttgctg gattatggaa actggcggat
    19321 gaatggtctg cgctgctcgc ttgatccatt gcgtcgtgag gtgaatgtca ctgcgctgac
    19381 tgatgataaa gcgctgatga tgattagctg tgaggcaggg gcctataaca ccattgattt
    19441 ggcatggatt gtgtcgcgta aaaatccgct ggcctcgcgc ccggttcggt tgcgtttgcc
    19501 gttcaacaac gggcaggaga cgaatgaact ggaactgatg aacgcaacat ttgatgagaa
    19561 atcgcgtgaa ctggtgacct tagcgaaagg gcgcggatta agcgattgtg gcattcaggc
    19621 gcgctggcgc tttgacggtc agcgttttcg cctggtgcgt tacgccgcag aacccacctg
    19681 cgataactgg catgggccag acgcctggcc cacgttgtgg atcacccgtt aaacaaaatg
    19741 gcggggacat gtaggccgga taagacgctg taggccggat aagacgcgtc agagtcgcat
    19801 ccggcaatca gcgtccggca atcagcatcc ggcgatcacc atcaggcacc tttcactccc
    19861 agcaccttat gcgcttttgc cacaatattc tcggcggtaa agccaaagaa cgggaacagc
    19921 ttatccgccg gagcagattc cccataacct gtcatcccaa caatcgcccc tttcaaacca
    19981 acatacttgt accagtaatc ggcaatacct gcttccaccg ccacgcgagc cgcaacgtta
    20041 gaaggcaaca ccgactcccg atattcctca tcctgggcgt cgaaaatatc agtcgagggc
    20101 agggaaacta cgcgtacatt gcgaccttct cccgctaatt tctctgccgc ttgcaggggg
    20161 atttccatct ctgaaccggt ggcaatcaaa ataatatctg gcttaccgcc gctgtctttc
    20221 agcacataac cgccacgggc aatctctttt acctgatccg gcgtacgttc cacctgggcc
    20281 agattctgcc ttgagaggat cagtgccgtc ggtccgttgt ggcgctcaac cgccagcttc
    20341 cagcccaccg ccgcttccac ctgatcgcac ggtcgccagg tgctgaaatt tggcgttaag
    20401 cgcaggctgg ccagttgctc aacagcctgg tgcgtcggac catcttcgcc caggccaatt
    20461 gagtcgtggg tataaaccat aatctgccgc gctttcatca gtgccgccat ccgcgcggcg
    20521 ttacgggcgt attcaacaaa catcaggaac gtggcggtat acggcacaaa gccgccgtgg
    20581 tgcgcgatgc cgttggctat agcggtcatg ccaaattcac gcaccccgta gtgaatgtag
    20641 ttgcccgccg gatcttcctt cagcgaaaca gaacctttcc agatggtcag gttgctggag
    20701 ccagatccgc cgaaccgccg agcaactcag gcagcatcgg cc
//
LOCUS       DAJVUK010000063        20637 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.063, whole genome shotgun sequence.
ACCESSION   DAJVUK010000063 DAJVUK010000000
VERSION     DAJVUK010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20637
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.063"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            127..942
                     /gene="mepH"
                     /locus_tag="OQQ57_002151"
     CDS             127..942
                     /gene="mepH"
                     /locus_tag="OQQ57_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-endopeptidase MepH"
                     /protein_id="HCS1956913.1"
                     /translation="MAQINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA
                     SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
                     SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG
                     RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            1070..1651
                     /gene="sodB"
                     /locus_tag="OQQ57_002152"
     CDS             1070..1651
                     /gene="sodB"
                     /locus_tag="OQQ57_002152"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HCS1956914.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(1797..2972)
                     /locus_tag="OQQ57_002153"
     CDS             complement(1797..2972)
                     /locus_tag="OQQ57_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1956915.1"
                     /translation="MKINYPLLALALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAA
                     GMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSR
                     ILTSLNHGAFFGLGSVVAASVEPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGW
                     RMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGA
                     MFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYPGGKLADRSVNGTLKGFLL
                     LLMVIMLAIPFLARNEFGAAISMVVWGAAAFAVVPPLQMRVMRVASEAPGLSSSVNIG
                     AFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(3138..3227)
                     /gene="ynhF"
                     /locus_tag="OQQ57_002154"
     CDS             complement(3138..3227)
                     /gene="ynhF"
                     /locus_tag="OQQ57_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HCS1956916.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            3526..4551
                     /gene="purR"
                     /locus_tag="OQQ57_002155"
     CDS             3526..4551
                     /gene="purR"
                     /locus_tag="OQQ57_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HCS1956917.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(4548..5480)
                     /locus_tag="OQQ57_002156"
     CDS             complement(4548..5480)
                     /locus_tag="OQQ57_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1956918.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            5593..6804
                     /locus_tag="OQQ57_002157"
     CDS             5593..6804
                     /locus_tag="OQQ57_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HCS1956919.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKAGNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNH
                     GNAEVAHSESH"
     gene            7095..8243
                     /gene="cfa"
                     /locus_tag="OQQ57_002158"
     CDS             7095..8243
                     /gene="cfa"
                     /locus_tag="OQQ57_002158"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HCS1956920.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSMVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(8283..8924)
                     /gene="ribE"
                     /locus_tag="OQQ57_002159"
     CDS             complement(8283..8924)
                     /gene="ribE"
                     /locus_tag="OQQ57_002159"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HCS1956921.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
     gene            9139..10512
                     /gene="mdtK"
                     /locus_tag="OQQ57_002160"
     CDS             9139..10512
                     /gene="mdtK"
                     /locus_tag="OQQ57_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HCS1956922.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(10553..11809)
                     /locus_tag="OQQ57_002161"
     CDS             complement(10553..11809)
                     /locus_tag="OQQ57_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
                     /protein_id="HCS1956923.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
                     PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            12117..12193
                     /locus_tag="OQQ57_002162"
     tRNA            12117..12193
                     /locus_tag="OQQ57_002162"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12151..12153,aa:Val,seq:gac)
     gene            12198..12274
                     /locus_tag="OQQ57_002163"
     tRNA            12198..12274
                     /locus_tag="OQQ57_002163"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12232..12234,aa:Val,seq:gac)
     gene            12382..12687
                     /locus_tag="OQQ57_002164"
     CDS             12382..12687
                     /locus_tag="OQQ57_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HCS1956924.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
     gene            12813..14417
                     /locus_tag="OQQ57_002165"
     CDS             12813..14417
                     /locus_tag="OQQ57_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-NAD(P)-binding protein"
                     /protein_id="HCS1956925.1"
                     /translation="MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPY
                     SDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILL
                     GEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI
                     ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFI
                     EDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKG
                     EEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFVQAWFAERKQRDPFDWAEKNL
                     QEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPS
                     ESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKV
                     KDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTA
                     CAEIGEAMARAVVKPASRARRRLSFD"
     gene            complement(14429..15241)
                     /locus_tag="OQQ57_002166"
     CDS             complement(14429..15241)
                     /locus_tag="OQQ57_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956926.1"
                     /translation="MIITRADLREWRIGAVMYRWFLRHFRRGGSYADIHHALIEEGYT
                     DWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCED
                     NARIAIAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI
                     ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG
                     VVDSIILGSGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC"
     gene            complement(15245..16030)
                     /locus_tag="OQQ57_002167"
     CDS             complement(15245..16030)
                     /locus_tag="OQQ57_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
                     /protein_id="HCS1956927.1"
                     /translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL
                     GLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGAT
                     AVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGI
                     MQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYW
                     LLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH"
     gene            complement(16027..16695)
                     /locus_tag="OQQ57_002168"
     CDS             complement(16027..16695)
                     /locus_tag="OQQ57_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416186.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HCS1956928.1"
                     /translation="MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDES
                     RCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCID
                     VCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLA
                     KGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIK
                     KENV"
     gene            complement(16759..17397)
                     /locus_tag="OQQ57_002169"
     CDS             complement(16759..17397)
                     /locus_tag="OQQ57_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707570.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhW family putative oxidoreductase system
                     protein"
                     /protein_id="HCS1956929.1"
                     /translation="MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAE
                     FIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYS
                     TQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEA
                     AIAAMDVAPEYADIRQVESSTAELYLFSERFMTYGKAYGLCEWFEVEQFQNP"
     gene            complement(17410..19512)
                     /locus_tag="OQQ57_002170"
     CDS             complement(17410..19512)
                     /locus_tag="OQQ57_002170"
                     /EC_number="1.2.7.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HCS1956930.1"
                     /translation="MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDE
                     VPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQ
                     MKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV
                     AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKR
                     LNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPP
                     GNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGN
                     TCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
                     KGVFKCVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWN
                     LGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPL
                     KLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTV
                     SPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRN
                     EHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQR
                     LGLEDIAADLAAHNLLPV"
     gene            complement(19482..20159)
                     /locus_tag="OQQ57_002171"
     CDS             complement(19482..20159)
                     /locus_tag="OQQ57_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein"
                     /protein_id="HCS1956931.1"
                     /translation="MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQE
                     DIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFG
                     DNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCS
                     ACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITVRILQRKKSWL
                     TVGQVIY"
     gene            complement(20426..>20637)
                     /locus_tag="OQQ57_002172"
     CDS             complement(20426..>20637)
                     /locus_tag="OQQ57_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1956932.1"
                     /translation="MTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRK
                     SLSFSKSVELHDKVIGHYLNIKHYQ"
BASE COUNT         5162 a         5373 c         4815 g         5287 t
ORIGIN      
        1 tcgccaacga aacgtatttt ttaacaataa aagctattaa ctttctcttc ttctatgcat
       61 tagaatcatc aagttttgta aatcagacgc aggcatgata gacctgcctt aacagaggga
      121 cgctcagtgg cgcagataaa ccgtatttcg atcacgctct gtgctttact ttttaccacc
      181 ctgcctttaa cgcctatggc ccatgcttca aagcaagcca gggagagttc tgctaccact
      241 catatcacca aaaaagcaga taaaaagaaa agcacggcaa ccaccaaaaa gacccagaaa
      301 acagcgaaaa aagccgccag taaaagtacg accaaaagca aaaccgcttc ttccgttaaa
      361 aaatcttcca ttaccgcttc taaaaacgcc aaaactcgca gcaaacacgc cgtcaataaa
      421 acggcctcag ccagctttac cgaaaagtgt accaaacgta agggctataa atcgcattgt
      481 gtgaaagtca aaaatgccgc gtcaggaact cttgccgacg cgcacaaagc gaaggtgcaa
      541 aaagctacga aagtggcaat gaataaactg atgcagcaaa ttggtaagcc atatcgttgg
      601 ggtggcagct caccgcgtac cggttttgat tgcagcggcc tggtttatta cgcttataaa
      661 gatttggtga aaattcgtat tccgcgtacg gcgaatgaaa tgtatcacct gcgtgatgca
      721 gcgccaatcg aacgtagtga actgaaaaac ggcgacctgg tctttttccg tactcaggga
      781 cgcggcacag ccgatcatgt cggcgtgtat gtcggcaacg gcaaatttat tcagtcaccg
      841 cgcacaggtc aggaaattca aatcacttct ctcagtgaag actactggca gcgccactat
      901 gttggcgctc gtcgggtaat gaccccaaaa acacttcgct aaaactttac cctgttgtta
      961 cggcaacagg gtaagttcat cttttgtctc accttttaat ttgctaccct atccatacgc
     1021 acaataaggc tattgtacgt atgcaaatta ataataaagg agagtagcaa tgtcattcga
     1081 attacctgca ctaccatatg ctaaagatgc tctggcaccg cacatttctg cggaaactat
     1141 cgagtatcac tacggcaagc atcatcagac ttatgtcact aacctgaaca acctgattaa
     1201 aggtaccgcg tttgaaggta aatcactgga agagattatt cgcagctctg aaggtggcgt
     1261 attcaacaac gcagctcagg tctggaacca tactttctac tggaactgcc tggcaccgaa
     1321 cgccggtggc gaaccgactg gaaaagtcgc tgaagctatc gccgcatctt ttggcagctt
     1381 tgccgatttc aaagcgcagt ttactgatgc agcgatcaaa aactttggtt ctggctggac
     1441 ctggctggtg aaaaacagcg atggcaaact ggctatcgtt tcaacctcta acgcgggtac
     1501 tccgctgacc accgatgcga ctccgctgct gaccgttgat gtctgggaac acgcttatta
     1561 catcgactat cgcaatgcac gtcctggcta tctggagcac ttctgggcgc tggtgaactg
     1621 ggaattcgta gcgaaaaatc tcgctgcata ataactgatg gcaaatgcag cattgcctga
     1681 tgcgcttcgt ttaccatgcc aacgcggatg aggcgttaac agcgcattcg gcaagataaa
     1741 tcgcacgttg tcagcaactg taacgcagaa ggttatcctt ctgcgttttt gtttaattag
     1801 ctgttagcaa cgcaaactgt ttcaggttgt tttctggctg acataaacac cagcaataat
     1861 gccagtcccg cgacaatcgc tcccatcacc ggcacaaagc tgtatcccag cccagcggaa
     1921 attaccgcac caccagcagc tgctcccagc gcatttccaa gattaaaggc accaatattg
     1981 actgatgaag acagacctgg cgcttcactg gcgacacgca tcacgcgcat ctgtaacggc
     2041 ggtacgaccg caaaggctgc tgcgccccac accaccatgc taatagctgc gccgaactca
     2101 ttgcgggcca ggaacgggat tgccagcata atcaccatca acaacaacaa aaagcctttc
     2161 aacgtgccgt taactgaacg atctgccagt ttgccgccgg gatagttacc gatagagaat
     2221 ccgacaccaa tcagcaccag cattgccgtg acgaacaccg gtgttgcgtg ggtaatactt
     2281 tgcagtaccg gagagatata ggtgtagaga gtaaacattg caccagctcc cagtaccgtc
     2341 gtcagcaatg cagacaacac ctgcggacgc attaataccg ccagctcttt tttcacttca
     2401 ggtcgtgccc ctgcaccacc tttaggtaat gagaagaaca gacttaccat tgaaatcact
     2461 cccagccccg ccgttgccag aaatgacatc cgccagccga tggtttcacc caaccaggtc
     2521 gccgccggca cgccaccgat atttgccagg gttaacccca taaacatagt ggcaactgcg
     2581 ctggcctgtt tatgttttgg ctccacgctt gcggccacga ctgaacccaa accaaaaaat
     2641 gctccgtgat tcaggctggt caaaatgcgt gaaagcatca gggtcatata atccggcgcg
     2701 atggcggaaa gtacgttgcc gagcgtgaaa attgccatca ggaaaatcaa cgcactgcgg
     2761 cgggcacgat gagaaagtag aagcgtcatc agcggcgcgc caaccattac gccaactgca
     2821 taggcactga ttaacattcc ggcagcggga atcgagacat ccacaccgcg cgcaatgacg
     2881 ggcaacaagc ccattggcga gaactccgtt gtcccgatac caaacgcgcc aatcgccagc
     2941 gccagcgcca gcaacggata gttaattttc atgccttatc tccacctctt cgcgtcatta
     3001 cgcgatattc attaaagtgg cgaaagcatg acagcaatca caaaaaaatg aaaataacaa
     3061 aaagagaaaa cacttttgcc attttgctaa caaacaggaa ggagatgcga gggagaacgc
     3121 gctccctcga gaggaaatca gtgcagcgcg gcagtcaaac ccacggccac gatcaaaccg
     3181 aggacgataa tcgttgttac cagtgaaaat ttaaggtcgg tgctcatcaa gttttctcct
     3241 tttttattac cacacaaata gtgatattac gcatttttac acactgtgat gaaaaaatct
     3301 cccgtcattt ataatgataa gtgtttttac cacttcccct tttcgtcaag atcggccaaa
     3361 attccacgct tacactattt gcgtactggc cattgacccc ttcctgacgc tccgtgtcgt
     3421 ttttccggcg taccgcaaca cttttgttgt gcgtaaggtg tgtaaaggca aacgtttacc
     3481 ttgcgatttt gcaggagctg aagttagggt ctggagtgaa atggaatggc aacaataaaa
     3541 gatgtagcga aacgagcaaa cgtttccact acaactgtgt cacacgtaat caacaaaaca
     3601 cgtttcgtcg ctgaagaaac gcgcaacgcc gtgtgggcag cgattaaaga attacactac
     3661 tcccctagcg cggtggcgcg tagcctgaag gttaaccaca ccaagtctat cggtttgctg
     3721 gcgaccagca gcgaagcggc ctattttgcc gagatcattg aagcggttga aaaaaattgc
     3781 ttccagaaag gttacaccct gattctgggt aatgcgtgga acaatcttga gaaacagcgg
     3841 gcttatctgt cgatgatggc gcaaaaacgc gtcgatggtc tgctggtgat gtgttctgag
     3901 tacccagagc cgttgctggc gatgctggaa gagtatcgcc atatcccaat ggtggtgatg
     3961 gactggggtg aagcaaaagc tgacttcacc gatgcggtca ttgataacgc gttcgaaggc
     4021 ggctacatgg ccgggcgtta tctgattgaa cgcggtcacc gcgaaatcgg cgtcatcccc
     4081 ggcccgctgg aacgtaacac cggcgcaggc cgccttgccg gttttatgaa ggcgatggaa
     4141 gaagcgatga tcaaggtgcc ggaaagctgg attgttcagg gtgactttga acccgaatct
     4201 ggttatcgcg ccatgcagca aatactgtcg cagccgcatc gccctactgc cgtcttctgt
     4261 ggtggcgata tcatggcaat gggcgcactt tgtgctgctg atgaaatggg tctgcgcgtc
     4321 ccgcaggatg tttcgctgat cggttatgat aacgtgcgca acgcccgcta ttttacgccg
     4381 gcgctgacca cgatccacca gccaaaagat tcgctgggtg aaacagcgtt caacatgctg
     4441 ttggatcgta tcgtcaacaa acgtgaagaa ccgcagtcca ttgaagtgca tccgcgcttg
     4501 attgaacgcc gctccgtggc tgacggcccg ttccgcgact atcgtcgtta atcacccgtt
     4561 gcgggagtct cttccggctc ccgcagccac tccttattca gcgtctcact atcgccgaga
     4621 tactcaagca gccaggttaa cgcaggcgac atatcatttt gctgccatgt cagacaacat
     4681 gccgaatccg ggaaggggtt ttccaattca agtgctaccc acttcccctc attaagccac
     4741 ggtttggcga aatgtgttgg caccatccct atgcataatc ctgccgagat acaggttgcc
     4801 gatgattccc agtcaggcac gacaactctt ttttggttat ccagtaacca ggtaatacgt
     4861 ttaggtagcg ttcgcgaggt gtcttcgcgc accaacgacg gccagttgcg caacgtatca
     4921 tcgctgaatg ggccatccat caacgccagc gggtggtggc tggcaacaac gcaactccag
     4981 cttagcatcc ccatatcccg gaaggcataa cgaccgccta ccggaatcgc gcgtgttgcg
     5041 ccaatcgcca gttccacgcg cccgtcggaa agcgcatccc agacaccgtt gaacacttcc
     5101 tgaaagacaa gaagttcgac atcatcaaaa tggcgataaa aatcaacgat catctgccgt
     5161 gtacgttctg gcctgacaat attatccact gcgatagcta actgaccgcg ccagccgttc
     5221 gctatctgct gacattgctg gcgggtgatc tgcatttttt tgacaacaga gcgcccttct
     5281 ttgagaaacc acgctccagc agcggtcagc tccacatcac ggtgccgtcg ttcaaagagc
     5341 ggcaccgcca gccactcttc cagctgacgc acggtatagc tgaccgcaga aggaacgcga
     5401 tgcagctcct gtgccgcagc gctaaaacta ccattacgcg ctaccgcatc aacaacttcg
     5461 agtgaatatt ctgaccacat agtctgcctg caaaattttt gaaatcagtc atcaaatatt
     5521 accgtttcac aacactaatt tcactcccta cactttgcgg cggtgtttaa ttgagagatt
     5581 tagagaatat acatgcaacc tgggaaaaga tttttagtct ggctggcggg tttgagcgta
     5641 ctcggttttc tggcaaccga tatgtatctg cctgctttcg ccgccataca ggccgacctg
     5701 caaacgcctg cgtctgctgt cagtgccagc cttagtctgt tccttgccgg ttttgccgca
     5761 gcccagcttc tgtgggggcc actctccgac cgttatggtc gtaaaccggt gttattaatc
     5821 ggcctgacaa tttttgcgtt aggtagtctg gggatgctgt gggtagaaaa cgccgctacg
     5881 ctgctggtat tgcgttttgt acaggctgtg ggtgtctgcg ccgcggcggt tatctggcaa
     5941 gcgttagtga cggattatta tccttcacag aaagttaacc gaatttttgc gaccatcatg
     6001 ccgctggtgg gtctatctcc ggccctggct cctctgttag gaagctggct gctggtccat
     6061 ttttcctggc aggcgatttt cgccaccctg tttgccatta ccgtggtgct gattctgcct
     6121 attttctggc tcaaacccac gacgaaggcc ggtaacaata gtcaggatgg tctgaccttt
     6181 accgacctgc tacgttctaa aacctatcgc ggcaacgtgc tgatatacgc ggcctgttca
     6241 gccagttttt ttgcatggct gaccggttca ccgttcatcc ttagtgaaat gggctacagc
     6301 ccggcagtta ttggtttaag ttatgtcccg caaactatcg cgtttctgat tggtggttat
     6361 ggctgtcgcg ccgcgctgca gaaatggcaa ggcaagcagt tattaccgtg gttgctggtg
     6421 ctgtttgctg tcagcgtcat tgcgacctgg gctgcgggct tcattagcca tgtgtcgctg
     6481 gtcgaaatcc tgatcccatt ctgtgtgatg gcgattgcca atggcgcgat ctaccctatt
     6541 gttgtcgccc aggcgctgcg tcccttccca cacgcaactg gtcgcgccgc agcgttgcag
     6601 aacactctac aactgggtct gtgcttcctc gcaagtctgg tagtttcctg gcttattagt
     6661 atcagcacgc cattgctcac caccaccagc gtgatgttat caacagtagt gctggtcgcg
     6721 ctgggttaca tgatgcaacg ttgtgaagaa gctggctgcc agaatcatgg caatgccgaa
     6781 gtcgctcata gcgaatcaca ctgatctata tcgatatact tatacttagg ctgctaacaa
     6841 aattttgttg tatgattgaa attagcggcc tatactaatt tcgagttgtt aaagctacga
     6901 taaatattat gtttttacgg ggacaggatc gttcccgact cactatggat ggtcatttcg
     6961 gcaagggttc ctcctttccc tctgttctac gtcggattat agactcgcgg ttttttctgc
     7021 gagatttctc acaaagccca aaaagcgtct acgctgtttt aaggttctga tcaccgacca
     7081 gtgatggaga aactatgagt tcatcgtgta tagaagaagt cagcgtaccg gatgacaact
     7141 ggtaccgtat cgccaacgaa ttacttagcc gtgccggtat agccattaac ggttctgccc
     7201 cggcggatat tcgtgtgaaa aaccccgatt tttttaaacg cgttctgcaa gaaggctctt
     7261 tggggttagg cgaaagttat atggatggct ggtgggaatg tgaccgactg gatatgtttt
     7321 ttagcaaagt cttacgcgca ggtctcgaga accaactccc ccatcatttc aaagacacgc
     7381 tgcgtattgc cggcgctcgt ctcttcaatc tgcagagtaa aaaacgtgcc tggatagtcg
     7441 gcaaagagca ttacgatttg ggtaatgact tgttcagccg catgcttgat cccttcatgc
     7501 aatattcctg cgcttactgg aaagatgccg ataatctgga atctgcccag caggcgaagc
     7561 tcaaaatgat ttgtgaaaaa ttgcagttaa aaccagggat gcgcgtactg gatattggct
     7621 gcggctgggg cggactggca cactacatgg catctaatta tgacgtaagc atggtgggcg
     7681 tcaccatttc tgccgaacag caaaaaatgg ctcaggaacg ctgtgaaggc ctggatgtca
     7741 ccattttgct gcaagattat cgtgacctga acgaccagtt tgatcgtatt gtttctgtgg
     7801 ggatgttcga gcacgtcgga ccgaaaaatt acgataccta ttttgcggtg gtggatcgta
     7861 atttgaaacc ggaaggcata ttcctgctcc atactatcgg ttcgaaaaaa accgatctga
     7921 atgttgatcc ctggattaat aaatatattt ttccgaacgg ttgcctgccc tctgtacgcc
     7981 agattgctca gtccagcgaa ccccactttg tgatggaaga ctggcataac ttcggtgctg
     8041 attacgatac tacgttgatg gcgtggtatg aacgattcct cgccgcatgg ccagaaattg
     8101 cggataacta cagtgaacgc tttaaacgga tgtttaccta ttatctgaat gcctgcgcag
     8161 gtgctttccg cgcccgtgat attcagctct ggcaggtcgt gttctcacgc ggtgttgaaa
     8221 acggccttcg agtcgctcgc taaaggctat tctatcgccc cctctccggg ggcgatttca
     8281 gatcaggctt ctgtacctgg ttgattcatg gcattttctc gtgccgccag cacacgttct
     8341 accgtatcta ccactgcctg agtttgtgga tcaatttcaa tgttgacgcg tgcgccgagt
     8401 tttttcttcc caagagtcgt gcgttccaga gtttccggaa ttaaatggac gcaaaaacgc
     8461 gttggcgtga cttcgccgac ggtcaggcta ataccgtcga tgccaataaa tcctttgtac
     8521 aggatatatt tcatcaactg actatcctgg actttaaacc agatctggcg attattttcc
     8581 gaggttaata ttttcgccac ttcagcggtg gtcataatat gacctgacat taagtgtccg
     8641 ccaatttcat cactgaattt cgccgcacgc tcaacgttta cccaatcccc cacttttaaa
     8701 tcgccaagat tggtaatgcg taacgtttct ttcatcaggt caaaactgac atggttgccg
     8761 ttaatttccg tcacggtcag gcagcaaccg ttatgcgcca cggaagcacc ggtttccagg
     8821 ccgtccagca tgtggtcggg taactccacc acatgcgtac gaaaatttgg tttctcgtca
     8881 atcgacacca gttttgcggt gccctgtaca atccccgtaa acatacttac aactcctgaa
     8941 atcagttaag acattctgtt cagcacaata gcaggtggca aacgccctta ccagtgaagg
     9001 ggtaagaatg actatttttt cactggagaa ttaataaatc ctcgctacaa tagactgaat
     9061 ttcccctgct tcttcttttt gctgcccatt caggcggctt tttagtctct catataacta
     9121 caaataaaag gtgttcacgt gcagaagtat atcagtgaag cgcgtctgtt attagcatta
     9181 gcaatcccgg tgattctcgc gcaaatcgcc caaactgcga tgggttttgt cgataccgtg
     9241 atggcgggcg gctatagtgc caccgacatg gcggcggtcg ctatcggtac ttctatctgg
     9301 cttccggcga tcctctttgg tcacggactg ctgctggcat taacgccggt tatcgcgcaa
     9361 ttaaatggtt ccggtcgacg tgagcgcatt gcgcatcagg tgcgacaagg tttctggctg
     9421 gcaggttttg tttccgttct cattatgctg gtgctgtgga atgcaggtta cattatccgc
     9481 tccatggaaa acatcgatcc ggctctggcg gacaaagccg tgggttatct gcgtgcgttg
     9541 ttgtggggcg cgccgggcta tctgttcttc caggttgccc gtaaccaatg tgaaggtctg
     9601 gcaaaaacca agccgggtat ggtaatgggc tttatcggcc tgctggtgaa cattccggtg
     9661 aactatatct ttatttatgg tcatttcggt atgcctgagc tcggtggcgt tggttgtggc
     9721 gtggctactg cggcggtgta ttgggtcatg ttccttgcca tggtttctta cattaaacgc
     9781 gcccgctcca tgcgcgatat tcgtaacgaa aaaggcaccg cgaaacccga tcctgcggtt
     9841 atgaaacgac tgattcaact cggtttaccg attgcgctgg cactattctt tgaagtgaca
     9901 ctgtttgccg tcgtggctct gttagtgtct ccgctcggta ttgttgatgt cgcaggacac
     9961 cagattgccc tgaactttag ttcactgatg tttgtgcttc caatgtcgct ggcggcagcg
    10021 gtaactatcc gcgtaggtta tcgtctgggt cagggctcaa cgctggatgc gcaaaccgct
    10081 gcgcggaccg ggcttatggt gggtgtctgt atggcaaccc tgacggccat tttcacggtt
    10141 tcactccggg agcaaatcgc cctgttgtac aacgacaatc ccgaggttgt aacgctggct
    10201 gcgcatttga tgttgctggc ggcggtatat cagatttctg actcaatcca ggtgattggc
    10261 agtgggattt tgcgtggtta taaagatacg cgttccattt tctatatcac ctttacagct
    10321 tactgggtgc tgggcttgcc aagcggctat attctggcac tgaccgatct ggtcgttgaa
    10381 cctatggggc cagcaggctt ctggataggc tttattatcg gcctgacatc ggcagccatt
    10441 atgatgatgt tgcgtatgcg gttcctgcaa cgtctgccgt cagttatcat tctgcaacga
    10501 gcatcccgct aataaagaca aggcgcaacc ttcacgggtt gcgcctgtgt ttttacgcag
    10561 gctggagcgt tgcgccaatc ccgtcttcgt ctggctgtaa tttcagagcg ttgcacagag
    10621 tttgccgact ggcatctgtt atctcaacgt gtatatcacc ggtaacttcc cctttcacat
    10681 tgatgaagtc aggtgagatt tctttcgcac tggtttgcag gcaaatcgct ccctctccgc
    10741 gcaggcgttt cactttcagt tgcacatgcg ttgccgcacc agtgatcagc cacagttttc
    10801 cgccattcag attgatgtta ccaacaataa aagtgacacc gtcacctttt accgtactgc
    10861 cgtcgagaat caacacaccg ccctgctgta cagtaatcgt tgattgttgc agatctgcgc
    10921 catagccaat aatcattgaa gcgccgtcca gtaatgcaac actcccggtc agttcaaccg
    10981 gtgcgcgatc ttcctctacg acaaaatttt cgtccgcgct ggtgggtgac aacaggatca
    11041 ctgttccacc ttgtattacc gcattttcca gcgtaccggc atgcacttca gcccgaccac
    11101 ccacattcac ggacaggttt tgcgtcttac cggaactgta gagctgaagg ccatccgtcc
    11161 ccagacgata aatggatcca ttctcaacaa tggtgtcaga gtcttcacca ccgagattat
    11221 tcatggtgcc accagcaagc aacgtatcac tggctttccc ggccagcata aaaacgccgc
    11281 cctgattaat ctcacaattg ctggcttccc cacctggata caccaacaat tcaccacctt
    11341 catctaccac gaccgctgag gttgtcccat taaccaacag gccgccctct tgatcgagaa
    11401 tgattttttc cgcgcgatgt ccttccagta cacgcaggtt accgccattt tccagcaaca
    11461 aaccgcaggc ataaccctga tcaacgctaa attcaccttc gggatggcgg ccattaaccg
    11521 tagcgagcgt agagagacta attgcgcctc cctcggactg aacaatatct gtggcaatgg
    11581 caccgtcgct gaccgatagc gtgccattgt taccgtactg tgtgcatttg gcgatcccac
    11641 cggttgccac tttcaaccag ccagcccccg tgactacggt attttcggct cttccgccag
    11701 cttcaacaat caactcgcct tcagtaagtt gcgtcgcgcc aatgacctcg ccggtcttaa
    11761 caatttgcac attcccgtcg ctcatcaagt ttttcgcatc agatcccatg atttattcct
    11821 ttgctgcatc tgtgtgcctt tattgctacc taaatgtaaa ggctacggag gatttatcca
    11881 cgacagattt gagatggtgg caaacaactc tgtttaaact ctgatacacg aattattggg
    11941 ttgtatcaga tgtaaatgcg atcctgaata aaaatcgccc ttgcaaatca acaaaatata
    12001 gccaatttgc ttaaaagctc tgcaaacggt cgaaatagcg cagaaaatta cgttttgcct
    12061 cttgccacct tcccactctg ccgctaatat tcgtccccgt tgtcacctac aacgttgcgt
    12121 tcatagctca gttggttaga gcaccacctt gacatggtgg gggtcgttgg ttcgagtcca
    12181 attgaacgca ccatcctgcg tccgtagctc agttggttag agcaccacct tgacatggtg
    12241 ggggtcggtg gttcgagtcc actcggacgc accagatttt cttaatctgg tcttctcctt
    12301 tttccctctg tttcttctct gtatccaata cgttaaaaga tttacactgt cttcgtatgc
    12361 gttatcagaa ggagaatcgc tatggcaact ttgttacaac ttcattttgc ttttaatggc
    12421 ccatttggcg acgcaatggc tgagcagctt aaaccgcttg ctgagtcgat taatcaggaa
    12481 cctggttttc tgtggaaggt atggacagaa agtgaaaaga accacgaagc cggtgggatc
    12541 tatcttttta ctgatgaaaa aagcgccctt gcctatctgg aaaaacatac tgcccgactt
    12601 aaaaatctcg gcgttgagga agttgtcgcc aaagttttcg atgtcaatga gccactgagt
    12661 caaatcaatc aggcaaaact cgcctgacag aatttaatca agggcggtta gcgccctttt
    12721 catccctgtc tgaaatttct caaattctaa aaatctcaac caaacttatc tgataacact
    12781 aaattcgaaa gaatgcgtac aggtaagtaa caatgaaaaa aattgctatt gtgggtgccg
    12841 ggcctacggg gatctacacc ttattctcgc ttctacagca acaaactcca ctttctattt
    12901 ctatcttcga gcaggctgac gaggccggtg tcgggatgcc atacagtgat gaggaaaact
    12961 caaaaatgat gctggcaaat attgccagta ttgaaatacc gccgattaat tgtacgtatc
    13021 tcgaatggct acaaaagcaa gaagccagcc atctccagcg ttatggcgtt aaaaaagaaa
    13081 ccttgcacga tcgtcagttt ttaccgcgaa ttctgctggg cgaatatttc cgcgatcaat
    13141 ttttacgatt agtagaccag gcacgacagc aaaaatttgc agtggctgtt tatgaatcat
    13201 gccaggttac cgatctgcaa attacaaatg ctggcgtcat gctcgctaca aatcaggatt
    13261 tacccagcga gacgtttgat ttagcggtga ttgccacggg tcacgtctgg cctgatgaag
    13321 aagaagcaac cagaacgtat tttcccagtc cgtggtcagg cctgatggaa gcaaaggtcg
    13381 atgcgtgtaa cgtgggtatt atgggaacat ccttgagcgg actggatgcg gcaatggcag
    13441 tggctattca gcatggttcg ttcattgaag atgataaaca acacgtcgtt tttaaccgcg
    13501 ataacgcaag tgaaaagcta aatattacgt tgatgtcgcg cacgggtatt ttacccgaag
    13561 ccgatttcta ttgccctatt ccctacgagc ccttacacat cgtcaccgat caggcattaa
    13621 atgctgagat tcaaaaaggt gaagagggcc ttttggatcg ggtatttaga ttgatagtag
    13681 aggaaatcaa gtttgctgat ccagactgga gccaacgcat agccttagag agcctgaatg
    13741 tcgattcctt tgttcaagcc tggtttgccg agcgcaaaca acgcgaccca tttgactggg
    13801 cagaaaaaaa tctccaggaa gtcgaacgca ataaacgaga aaaacatact gttccctggc
    13861 gttatgtcat tctgcgcctg catgaagccg tacaggaaat tgttccacat ctgaatgaac
    13921 acgaccataa acggttcagt aaaggccttg cccgggtttt tatcgataat tatgcggcaa
    13981 tcccttcaga gtctattcgt cggctgctgg ccttacgtga agcggggatc attcatattc
    14041 tcgccctcgg tgaagactac gaaatggaaa ttaatgagtc gcgcaccgtc ctgaaaacgg
    14101 aagacaacag ctactcgttt gacgttttta ttgatgcccg cggacagcgt ccgcttaaag
    14161 tgaaagatat tcctttccct gggctacgcg agcaattaca gaaaacaggg gatgaaatcc
    14221 ctgatgttgg cgaagattat acgttacagc aacccgaaga tattcgtgga cgcgtagcgt
    14281 tcggcgcgtt gccctggttg atgcacgacc agcctttcgt tcagggactt acggcatgtg
    14341 cagaaattgg tgaggcgatg gctcgggcgg tcgtaaaacc tgcatcccgt gcacgtcggc
    14401 gtctttcgtt tgattaaagg taaagctatc agcactcaac aaactgatgc tgttcattaa
    14461 gacgatagcg gactccggtt cgaatattgt tttcaccttc aatggcgacg gcgaagcgaa
    14521 ctctttcgcc gtcatgatat gccagtgcgg cgcttccccc tgacccgaga ataattgagt
    14581 cgaccacgcc cgtgctcact accgttgaat tttcaccgct ggcaatgatg tgtacattgt
    14641 cgccgctgtt ggcaattctg gcgtttgcgc caaagctggc gatttgcacc aggtcaccat
    14701 tactggcgac atgacaccgt tcacccaatg tacaaacgcg tactcgcatt ccggtattcg
    14761 caatccgact actatctcca gcgctgctta tccgcgaaga attaccggtt acagcaaccc
    14821 gtgcgcgttc accggagctg ccaatgtgac tgttaaagcc gacacttcca atccgcacgc
    14881 tataacccat actggcaatt tgcgcggcat acccagcgat tgcgattcgg gcgttatcct
    14941 cacaacagcc gatgcgagca tgatcgtcgc tgcgggcaaa ctgactgcaa aatggtatct
    15001 ctccggggtc tgtggccagt ttttgcatag aggaaacttc ctgatgcgcg aagttttcat
    15061 ccgccagcca ttttttccac gcatactcaa ccagactctc cgcccagtcc gtatatcctt
    15121 cctcaatcag tgcatgatga atatcggcat aactaccgcc gcgtcggaaa tggcgcagga
    15181 accagcgata catcaccgct ccgatacgcc attctcgcag gtctgctcgt gtaatgatca
    15241 ttcgttagtg ccggtgatag ccatcgacca tgcttttaaa ggtttcgtgt ggcgtacgcc
    15301 ccgtggtgca aagataaaga tgtccgaaga taaaaaagag gcttataaat gccagagcaa
    15361 aatgcgcctg caataaccag tatcttacgc caggaaacac atctcccacg gcttgcggat
    15421 agagacacaa cagccccgtc aatagtaaca acggcagcaa tccatacatg acaccaacat
    15481 aggcgacctg ctgtaaggga ttaaatttag actgtgttgt tgccgggaaa ggatgttctt
    15541 ccccctgcat aatgccaaac aaataaaatc gcgtttgttt tgccgctcgt tccagccacc
    15601 cctgacgacg aatgcgatag tggtgaccat tatccccaac ggcattgatc agcacaaagc
    15661 cgagccagca tgccagtaac aaaaatccgc aaacttcatg caccgcaacc agacttttaa
    15721 ccgcagttgc gcccaccatc gcaaagtgat ttatcagccc acttgccagc aacaatacaa
    15781 agagtaacgc attcgaccag tgccataatc tgaccgcttt gctgtaaaga taaaccttct
    15841 caccatgatc ggtggctgat ttcttcacgc cacgagcacg aagcaaggcg tgcagcccca
    15901 gcaccaacca catcccaacc agcaatactc cggcaatgat caaccacacc ggccaaaatt
    15961 cgggagtgaa ctgtggcaca tagttcgcta actggctctg aaactgttca gcatgttgcg
    16021 acgggttcat acattttcct ttttaatcaa atgttgaccg aaccggcgat acagatgcgg
    16081 tttcccggca ccaggtagct gatattgata gtatttatta tcctgcaacc acgcctgaat
    16141 ttctgggcta tcttcgcgac caaagatcaa tgcgtgttcc ggacaggcgc tgacgcaaat
    16201 gggcggaaag ccttttgcca gtcgggactc agcgcagaaa tcacatttat ctgccacttt
    16261 agtgacaggg ttaaggtagc gaacctggta cggacaagcg ccaatgcaat aactgcagcc
    16321 gatgcactgc gatttttcta cccgcacgat cccctgctca tcacgccacg atgcccccgt
    16381 cgggcaaacg tcgatgcacg gagcatcttc gcagtgctga catgactggc gaaaaaagtg
    16441 atactgcgtt tcgttgtcgt tatcggtgac tggaatgtgt gctatcgata aacggcttcc
    16501 ctgagcgggg acgtggttag ttttacggca tgcgcgggcg caaatattac agccattgca
    16561 ccgtgactcg tcatgaatca tggcataccg aacttccttt tcttgcctcg tgttcgctaa
    16621 cagagaagac gcagaaccag taaaaaagat tactgttccc atccccagaa caaatttgcg
    16681 tcgagtgaag gacatctgat tatcccctaa tgcagtggct gcaactgtcc accctatcca
    16741 tgacatctcc ctgaaatttc aggggttctg aaactgctct acctcgaacc attcgcataa
    16801 gccataagcc ttgccatagg tcataaatcg ctcactaaac aagtacaact ccgccgtcga
    16861 tgactccacc tgccgtatat cggcatattc aggtgcaaca tccatcgcgg cgatcgcggc
    16921 ttcaatctgc gcttcctgga agtaatatgg cgcttgcatc agcatggcga ctttgtaagg
    16981 acgaggatat gtctggcact caaaacgaac ggcgtgtgca atggcgcgac aaatgtcctg
    17041 ctccacaact tgcaaagaca tcgccgcgta gttttcactc atggcctgcg ttgagtaata
    17101 gtaatcatcc tggcttcccg tcatacaagc gatatcagcg tagtctccgt tctgcttaat
    17161 gctttccagc aaaactgaca gctcctcttc tgcaaccgaa tagggtggcg agagaaacac
    17221 ggcgcgcgcc accagctgcc cagccgcaga atgctggcga atgaactctg ccaggatttc
    17281 agccggttct ggttcggtta ccgtatcaac ggggtgacgc atcccctgta accattgccg
    17341 cttcgcctcg tcaacttcgc tgactttcgc taacggcaat tcatcccgat ggttcatctc
    17401 acccattcct tacacaggca gtagattgtg tgctgccaga tcggcggcaa tatcttccag
    17461 ccccagacgc tgcaatgttt cgcgggtggg actaccaagc tgtgggtccc agcccatttc
    17521 tttgtagaac atcgtgagcg aagcatgcat atcgtcacga tccattttgt cagtaccttc
    17581 agtaaagacc gggatctgcg gatccttgtc gaatacccag gaacagataa gatcgtgttc
    17641 attacgcata tctttggttt gcataagttt taccgtgtag gcacgatgca acgtaaagat
    17701 acgctctgca gctaaatcta atttttcctg agtcatctct tcgccggtga tcgctttgaa
    17761 gaatttggct tcaagcgcca gatcgccccg gtaattacgg cttttcagcg gcgaaacggt
    17821 cattggccag acccagttac acagggtgac ggcgttatgc aaacagaccc gcaacagcga
    17881 ccacttagca tatttaattt ttgcgtcatt gattggcgtg tagtttttgg tttcatcgta
    17941 ggcatcttca gaaccaaaaa gctctttcgc cacttcacgt tgcagtttca atggcaagcc
    18001 ggaaccaata aagttgatat gggtatgtgt catgcagtca cggttgaaca tacagttaac
    18061 aatggaaccg acctgcgctg acgcttcatt ggcatggtga accggatagc caaacggcga
    18121 ccagagttta tttttcgcgt agccccagta ctcttcaccc aaattccagc gttctgcgat
    18181 ggcatatgaa ccatcagcca ggtgactcag ctcacccaca cgatgcgcca gacggtagta
    18241 aaaatcttta atgaaattaa cgtcacccgc ttccagttga tcccagtgaa tttccgcata
    18301 ctcttcagca ggcagaacac acttgaacac ccctttgctg taacaataag taaagtcgcg
    18361 atgcaactgc ccgtagttac accataggcc gtagtcatcg aacaaattca gaccaaccaa
    18421 gttaccaatc acacggccat cgtctttatc ttcaaaatct ttcggaccgt tcgggaagat
    18481 ggtggtatgg acaaagttgg ctacacaagt gttaccacct gtgctgggca cgccaaactc
    18541 tttcacccga ggaatattca tttgggtcat acaacggatc gggcaagagt ggcagccact
    18601 catttttact gtgtatttct ctgccgccgg acctaagtca aaaacggatt tataggtacg
    18661 aaagccgacc gtgttctgat tgcctggcgg aatttccccc gtttcaatcg gaccaccttc
    18721 agccgcgccc caaaacagcc ctttacgtgc tgtccaacgt gacttgggat ctgaatactc
    18781 tgcccacgat tgcggcgtac ttggcacgac atggttgtta ttcgcaccaa taagttcagt
    18841 catcatgtaa tcgttgagac gcttcatctc ctgacgatcg gcaatgttga cccctttcgt
    18901 cccttcaacc gcaatcgctt tcaggttttt cgaacccata attgcgccag ttcccgcacc
    18961 gccgctgtgg ttacggctat tcaacatgcc agagagagga acaaggtttt ccccagcctg
    19021 gccaatagcc gccacacagg tttccggact ggtcaatcga caaatttctt ccgtcgttgc
    19081 gcgcgtccct tttccccata agaaatcggc tttttccagg ctaactttgt catctttaat
    19141 cttcagccat accggtgatt tcgccttccc ttcgataata atgacgtcgt atccagcgaa
    19201 tttcatttgc gctgcaaaaa agccacccat atgggcatcg acaactaaat ttcctttggt
    19261 aaaagtagaa agtgaggtga tatttacgcg agaactacag ggggcaccag atccagttaa
    19321 tgggccggta gcaaagacta atttattcgc ttcatcgaaa ggtttcgtgc ctggcggtac
    19381 ttcgtcatac ataattttgt agccgaagcc catgccaccg acaaaacttt taaacttact
    19441 ggaatcttcg agggtaatat ttcctgtcgt gagattgact cttaatatat tacctgtcca
    19501 accgttagcc atgatttttt cctttgcaag attctcacag taatatcttt ccactcgata
    19561 atttttaacg cccctgttgg gcaggcgttt gcacattcac cgcataacac acatttcgag
    19621 gattttttac tttcggtatt tacggtggcc atcatccacg ggcatgccgt agtacaggcg
    19681 ctacagccaa tacagcgttt atgatcgacg gtaatacagc cttctttctg ctgccaggta
    19741 atcgcaccaa tcgggcagac gttcatgcat tgcggctctt tgcattgacg gcaggtgtcc
    19801 gcggtatagt tgagatcgcc atacaggccg ccgccagagc caaccccgtt gtcgccaaag
    19861 aaataattgc gatggatttt gatacgggag aagaatgtcc ctactgagcc atcgttgaag
    19921 ttggtacaag agatttcaca gcggtggcaa cccgtgcatc gcgctcgctg ggtcaccagc
    19981 acccctttgg gtgtatttat caaccctact gtgccgctat caatatcttc ctgtttgcaa
    20041 cccaaaagtg acagtaacgc aggggcaatt gttagaccag caaggccttt tcctgatata
    20101 cgcaagaatt ctaatcgcgt taagccaata tctaatagtg gacgatcaac cgggttcatt
    20161 tatttcgcat cctcttcgca aacacagtgc tgacaattca gcagcctgat attaagcatt
    20221 caattaatac gctgctgact ctgtccccaa caccagatat tttccctaac ccgatagtgt
    20281 atgagaaaag atttaacgcc gataaactaa tcctttatgg ttaggagaaa aaataatgtg
    20341 attattctga gcccttaaca ttgatcgtta tcaattaaaa ttacaaagca agaaattata
    20401 agtgaactga ggtaatgact ccaacttact gatagtgttt tatgttcaga taatgcccga
    20461 tgaccttgtc atgcagctcc accgattttg agaacgacag tgacttccgt cccagccttg
    20521 ccagatgttg tctcagattc agattatgtc gctcaatgcg ctgagtgtaa cgcttgctga
    20581 taacgtgcag ctttcccttc aggcgtgatt catacagcgg ccagccatcc gtcatcc
//
LOCUS       DAJVUK010000064        20564 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.064, whole genome shotgun sequence.
ACCESSION   DAJVUK010000064 DAJVUK010000000
VERSION     DAJVUK010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20564
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.064"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(27..452)
                     /gene="nudI"
                     /locus_tag="OQQ57_002173"
     CDS             complement(27..452)
                     /gene="nudI"
                     /locus_tag="OQQ57_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HCS1956933.1"
                     /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEYGE
                     RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN
                     REVKINEEFQDYTWVKPEDLVHYDLNVATRKTLRLKGLL"
     gene            731..1273
                     /locus_tag="OQQ57_002174"
     CDS             731..1273
                     /locus_tag="OQQ57_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1956934.1"
                     /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
                     GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK
                     DGNRDNAVADGPYVGVNASF"
     gene            1373..2575
                     /locus_tag="OQQ57_002175"
                     /pseudo
     CDS             1373..2575
                     /locus_tag="OQQ57_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416752.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
     gene            2795..3577
                     /locus_tag="OQQ57_002176"
     CDS             2795..3577
                     /locus_tag="OQQ57_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HCS1956935.1"
                     /translation="MLESSKVPTLTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYL
                     LLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCH
                     LGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLSWQPAAVQQSIIEGL
                     VWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYPDVRCVAAPVFNANNELTAAIS
                     VVGTRLQINEEYRDYLAGKSIACARDISRLLGWKSPFDLQAS"
     gene            3592..4797
                     /gene="rhmD"
                     /locus_tag="OQQ57_002177"
     CDS             3592..4797
                     /gene="rhmD"
                     /locus_tag="OQQ57_002177"
                     /EC_number="4.2.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnonate dehydratase"
                     /protein_id="HCS1956936.1"
                     /translation="MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATP
                     MSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG
                     KCVSDIKLIHDQMLNATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV
                     RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFW
                     LMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYEGYRELKRNAPVGMMVTSGE
                     HHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHA
                     VITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRD
                     CNLKRPYSH"
     gene            4854..6143
                     /locus_tag="OQQ57_002178"
     CDS             4854..6143
                     /locus_tag="OQQ57_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1956937.1"
                     /translation="MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQI
                     DTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWAD
                     TEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLS
                     GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQ
                     LASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT
                     ASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVA
                     LCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA
                     SDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH"
     gene            6161..6964
                     /gene="yfaU"
                     /locus_tag="OQQ57_002179"
     CDS             6161..6964
                     /gene="yfaU"
                     /locus_tag="OQQ57_002179"
                     /EC_number="4.1.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HCS1956938.1"
                     /translation="MNALLTNPFKERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLL
                     IDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTA
                     DQARQVSSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDN
                     LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV
                     APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY"
     gene            complement(7005..7907)
                     /locus_tag="OQQ57_002180"
     CDS             complement(7005..7907)
                     /locus_tag="OQQ57_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HCS1956939.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE
                     QGIDRDQVLAATQLSEADLAANNH"
     gene            complement(8100..9290)
                     /gene="glpC"
                     /locus_tag="OQQ57_002181"
     CDS             complement(8100..9290)
                     /gene="glpC"
                     /locus_tag="OQQ57_002181"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HCS1956940.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            complement(9287..10546)
                     /gene="glpB"
                     /locus_tag="OQQ57_002182"
     CDS             complement(9287..10546)
                     /gene="glpB"
                     /locus_tag="OQQ57_002182"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HCS1956941.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
                     QGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLH
                     ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLLCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPHFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            complement(10536..12164)
                     /gene="glpA"
                     /locus_tag="OQQ57_002183"
     CDS             complement(10536..12164)
                     /gene="glpA"
                     /locus_tag="OQQ57_002183"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HCS1956942.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            12437..13795
                     /gene="glpT"
                     /locus_tag="OQQ57_002184"
     CDS             12437..13795
                     /gene="glpT"
                     /locus_tag="OQQ57_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HCS1956943.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
                     GG"
     gene            13800..14876
                     /gene="glpQ"
                     /locus_tag="OQQ57_002185"
     CDS             13800..14876
                     /gene="glpQ"
                     /locus_tag="OQQ57_002185"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCS1956944.1"
                     /translation="MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(14918..15160)
                     /locus_tag="OQQ57_002186"
                     /pseudo
     CDS             complement(14918..15160)
                     /locus_tag="OQQ57_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            15339..15989
                     /gene="inaA"
                     /locus_tag="OQQ57_002187"
                     /pseudo
     CDS             15339..15989
                     /gene="inaA"
                     /locus_tag="OQQ57_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416740.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
     gene            complement(16043..16297)
                     /gene="yfaE"
                     /locus_tag="OQQ57_002188"
     CDS             complement(16043..16297)
                     /gene="yfaE"
                     /locus_tag="OQQ57_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HCS1956945.1"
                     /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(16297..17427)
                     /gene="nrdB"
                     /locus_tag="OQQ57_002189"
     CDS             complement(16297..17427)
                     /gene="nrdB"
                     /locus_tag="OQQ57_002189"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HCS1956946.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
     gene            complement(17574..19859)
                     /gene="nrdA"
                     /locus_tag="OQQ57_002190"
     CDS             complement(17574..19859)
                     /gene="nrdA"
                     /locus_tag="OQQ57_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HCS1956947.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGECP
                     WFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
BASE COUNT         4836 a         4983 c         5521 g         5224 t
ORIGIN      
        1 acagccagtg atggctgtca tcattgttaa agaagacctt tcaaacgtaa cgtttttcgg
       61 gtggcaacat tcaaatcata atgcaccaga tcttcaggtt ttacccacgt gtagtcctga
      121 aactcttcgt ttattttcac ttctcggttg gcagaaacgc agtcaaaaat caggtaaatc
      181 atataaatct cttccttgcg accatctgca tacgtcttgg tgcgaatatc atcgctgaag
      241 gtccacggcg tgatttctgt caaaagcagc tgttctccca gttcttcgcg aatttcgcgg
      301 cgtagtgcct cttcaattcg ttcgccatac tccacgccgc cacccgaaag cgcccattga
      361 ccggggaaaa cgccgcgatc gtcggccatt ttgcacagca gataagcacc atcattttga
      421 atcaaagggc atacaatagt ccgttgtcgc acaggggtat tccttataaa taaaaagaaa
      481 ccatgagaat acggtaactc agaaatatgt gaaagtgaca gtaatctctt ttgcgatgat
      541 aactgcactt attattattt ttgtgtgtat cggtaaagtg tgtttatttt ttcggcgttt
      601 aattatttaa gaagtattta gttacaataa gtgactagat cccttttttc gctcattgaa
      661 tcctctgtgc caggcagtac aatcccgcag ctttgggaat tttgattaat tgcttgtggg
      721 aaaggggata atgaaaaaaa ttgcgctagc aggtctggcc ggaatgctgt tggtttctgc
      781 atcggtcaat gcaatgagca tcagcggtca ggcgggtaaa gaatacacca atattggtgt
      841 cggttttggg actgaatcga cgggcctggc gttaagcggt aactggacac ataacgacga
      901 cgacggtgac gtcgctggcg tggggctggg gttgaatctg cctctagggc cgttaatggc
      961 gaccgttggc ggaaaaggcg tttacaccaa cccgaattac ggcgatgaag gttatgccgc
     1021 agcggtagga ggtggtttgc agtggaaaat tggcaacagc ttccgtttgt ttggcgagta
     1081 ttactactct ccggattcac tctccagcgg tattcaaagt tatgaggaag cgaatgctgg
     1141 cgcgcgttac accattatgc gtccagtcag tattgaggcg ggttatcgct acctgaattt
     1201 gtcgggtaaa gatggtaacc gcgacaacgc cgtggctgac ggcccgtatg ttggggttaa
     1261 cgccagtttc tgatcccttc cggcgcggca ttctgtcgcg ccattcagtt tcttactacg
     1321 ccttatctcc ctttgcgtta tagtgattcg ataacaaaag caggagataa ccatgttaaa
     1381 agtggaaatg ttatccaccg gggatgaagt gttacacggg caaatcgttg acactaacgc
     1441 tgcctggctg gccgattttt tctttcatca ggggctgcca ttatctcgcc tcaatacggt
     1501 gggggataac cttgatgact tagtcaccat tcttcgcgaa cgtagtcagc acgccgatgt
     1561 gctgatcgtt aacggcgggc tgggaccgac cagcgatgat ttaagcgcac tcgccgctgc
     1621 gacagcaaaa ggtgaaggcc tggtgctgca tgaagcctgg ctcaaagaga tggaacgcta
     1681 tttccacgaa cgtggacgag taatggcacc gagcaaccgt aaacaagcgg agctgcctgc
     1741 cagtgctgaa tttatcaata acccggtagg caccgcctgt ggttttgccg tgcagcttaa
     1801 tcgttgcctg atgttcttta ctcccggcgt accgtcagaa tttaaggtga tggtcgagca
     1861 cgaaatcctg ccgcgcctgc gcgagcgttt ttctttacca cagccgccgg tttgtctgcg
     1921 tttaactacc tttggtcgtt cggaaagcga tctggcacaa agcctggaca ctctacaact
     1981 gccgccgggc gtaacaatgg gctatcgctc ttcaatgccg attatcgaac tgaaactcac
     2041 cggaccggca agcgagcaac aggcgatgga aaaactgtgg ctggacgtta aacgtgttgc
     2101 cggacagagc gtgattttcg aaggcaccga aggactgccc gtgcagatca gtcgcgaatt
     2161 gcaaaaccgc cagttcagcc tgacgttgag cgagtaattc accggtggtt tattggcttt
     2221 gcaactttct cgcgcaggtg ctccattgct ggcgtgtgaa gtggttcctt cacaggaaga
     2281 aaacctggcg caaactgcgc actggattac agaacggcgg gccaaccatt ttgccgggct
     2341 ggcactggct gtttcgggtt tcgagaacga acatctcaac tttgcgctag ccacaccaga
     2401 cggcactttc gctctgcgtg tgcgtttcag cactacgcgc tacagcctgg ctatccgtca
     2461 ggaagtgtgc gcaatgatgg cactgaatat gctgcgccgt tggttaaacg gccaggatat
     2521 cgccagtgag catggctgga ttgaggttat tgagtccatg accttatctg tctgattccg
     2581 ccactctgtg ccggtttact gcaccggcac attccccctc cggcaaaact tgtccaacct
     2641 gttgcactca ataagaaaaa atccgtgcac tgattcacaa atttgtgcgt aatttctcca
     2701 gtccgctgga cgaggagcgg gatttgatgc gcttcacaat tttactcccc ctgagcaacg
     2761 agactgattc cagtatctaa gactggagtc cagtatgttg gaatcaagca aagttcccac
     2821 cctgacacgg gctattgata ttctaaattt gattgcccgc attggcccct gtagtgctgc
     2881 gacgatcatt gacacattgg gaatccctaa aagcacggcc tatttgctgc ttaatgaact
     2941 caggcgtcag cgttttctta gccttgatca ccaggaaaat ttttgtttgt ggaccaggct
     3001 ggtggagctt tctggtcatg cgttaagcaa gatggatctc cgggaactgg ctcgaccgcg
     3061 tttgacgcaa ctgatggata ccaccgggct gttatgtcat ctggggatta ttgataacgg
     3121 cagcgcttat tacattttaa aagtggagtc atcagccact atcagcgtgc gttcccatga
     3181 aggaaaaagc ctttcgcttt atcgctccgg aataggtaaa tgcctgcttt cctggcaacc
     3241 tgcagcggta cagcaaagta ttatcgaagg gctggtctgg gagcaggcga cacccacaac
     3301 gattactcat ccacagcaac ttcacgaaga actggcgcgt attcgccgtc agggctggag
     3361 ctatgacaac ggcgaagatt accccgatgt ccgttgtgtc gctgcgccgg tgtttaacgc
     3421 caataacgag cttaccgctg cgatctcggt ggtcggtacc cgcttacaaa tcaatgaaga
     3481 ataccgtgat tatctggcgg gcaagtccat tgcctgcgcc agggatattt cacgtctgtt
     3541 gggatggaaa agtccctttg acttacaagc ctcataacaa tggagaacat catgacccta
     3601 ccaaaaatta aacaggttcg cgcctggttt actggcggtg cgacagcaga aaaaggcgct
     3661 ggcggcggtg attatcacga ccagggggcg aatcactgga tagacgatca tattgccacc
     3721 ccgatgagta aataccgcga ttacgagcag tcacgccagt catttggcat taacgttctt
     3781 ggcacgttgg ttgttgaagt cgaagcagaa aacggccaga ccggattcgc tgtttcgaca
     3841 gccggtgaaa tgggctgttt tatcgtcgaa aaacacctta accgtttcat tgagggtaaa
     3901 tgtgtcagtg atatcaaact gatccacgat caaatgctca atgccaccct gtattactcc
     3961 ggctctggtg gcttggtgat gaatacgatt tcctgtgtcg atctggctct gtgggatctg
     4021 ttcggcaaag tggtcgggct tccggtttat aaacttttag gcggcgctgt tcgtgatgag
     4081 attcagttct acgccacagg tgcgcgtccg gatctggcaa aagagatggg ctttatcggt
     4141 ggcaaaatgc cgacgcactg ggggccacat gatggcgatg cggggatccg caaagatgcc
     4201 gctatggtcg cggatatgcg tgaaaaatgc ggtgaagatt tctggttaat gctcgactgc
     4261 tggatgagtc aggacgtgaa ctatgcgacc aaactagccc acgcttgcgc gccctataac
     4321 ctgaaatgga tcgaagagtg cctgccgcca cagcagtatg aaggttatcg cgaactgaaa
     4381 cgcaacgcgc cagtcggaat gatggtcacc agcggtgagc accacggcac actgcaatct
     4441 tttcgtacgc tttcagaaac cggtatcgac attatgcagc cggatgttgg ctggtgcggt
     4501 ggtttaacca cgctggtgga aattgccgca atcgccaaat ccagggggca actggtggtg
     4561 ccgcacggtt cgtctgttta ctctcaccat gcggtgatca ccttcaccaa tacgccattc
     4621 agcgaattcc tgatgaccag cccggattgt tcaacgatgc gtccgcagtt tgacccgatt
     4681 ctgctcaatg agccggttcc ggtgaatggt cgtattcata aatcagtgct tgataaaccc
     4741 ggttttggcg tcgaactcaa tcgtgactgc aatttgaaac gcccctacag ccactaatca
     4801 ctccgggcgt tgctgtgaca acggtaacgc ccacatattc taaggagctt tttatgagca
     4861 ccgctttgct tgacgccgtg gtgaagaaaa accgtgtgcg tttaattccg tttatgttgg
     4921 cgctgtatgt gctggcgttt ctcgaccgtt cgaatatcgg ttttgccaaa cagacctacc
     4981 agattgatac cgggttgagt aatgaagctt atgcgctggg agcaggcatt ttctttgtgg
     5041 tatatgcgtt tctgggggtt ccggcgaatc ttttgatgcg caaactgggg gccagaacct
     5101 ggattggtac gacaacactg ctgtggggat ttctttcggc agccatggca tgggccgata
     5161 ctgaagcgaa atttctgata gttcgcactc tgcttggtgc tgcggaggcc ggatttttcc
     5221 ctggtatgat ttatctcacc tcgcaatggt ttccgcagcg taatcgcgcc agcattatgg
     5281 ggctgttcta tatgggcgca ccgctggcgt taacactggg atcaccgctt tccggcgcgc
     5341 tgttggagat gcatggattt atggggcatc ccggctggtt ctggatgttt gtgattgaag
     5401 gattgttggc agtcggtgct ggggtattca cattcttttg gcttgatgac acaccggagc
     5461 aggcacgttt tctgagtaaa caagaaaaaa cgttgcttat caatcaactg gcaagtgaag
     5521 aacaacagaa agtgacttct cggctgagcg atgcgctgcg taatggccga gtctggcaac
     5581 tagcgattat ctacctgacc attcaggtgg cggtttacgg attaattttc ttcctgccga
     5641 cccaggttgc ggcattgctg ggaacaaaag tgggctttac agcgtcggtg gtcaccgcca
     5701 ttccgtgggt tgcggccttg tttgggacct ggcttattcc gcgctattcc gataaaaccg
     5761 gcgaacggcg taatgtcgca gcgctgacat tactggcggc gggcattggt attggtctgt
     5821 ccgggctgct ttctccagta atggcgatcg tagcgctgtg tgttgcagct atcgggttta
     5881 ttgccgtgca gccggtgttc tggacgatgc cgacacaact gctttccggt acggcgctgg
     5941 ctgcggggat tggttttgta aacctgtttg gtgcagtggg cgggtttatt gccccgatcc
     6001 tgcgcgtgaa agcagaaacg ttatttgcca gcgatgcggc aggattactg acactggcag
     6061 cggtggcggt catcggttcg ctgattattt tcactctgcg tgtaaatcgt actgttgcgc
     6121 agaccgacgt ggcacatcat taaataggtt aaggaacacg atgaacgcat tattaaccaa
     6181 tccctttaaa gaacgtttac gcaagggcga agtgcaaatt ggtctgtggt taagctcgac
     6241 tacttcttat atggcagaaa ttgccgctac ttccggttat gactggttgc tgattgacgg
     6301 ggagcacgcg ccaaacacca ttcaggatct ttatcaccag ctacaggcgg tagcgcccta
     6361 tgccagccaa cccgtgatcc gtccggtgga aggcagtaaa tcgctgatta aacaagttct
     6421 ggatattggc gcgcaaactc tattgatccc gatggtcgat actgccgatc aggctcgtca
     6481 ggtgtcgtct gccacgcgct atcctcccta cggtgagcgt ggtgttgggg ccagtgtggc
     6541 acgggctgcg cgctggggac gcattgagaa ttacatggcg caagtcaacg attcgctttg
     6601 tctgttagtg caggtggaaa gtaaaacggc actggataac ctggacgaga tcctcgacgt
     6661 cgaagggatt gatggcgtgt ttattggacc agcggatctt tctgcgtcgt tgggctaccc
     6721 ggataacgcc gggcacccgg aagtgcagcg aattattgaa accagcattc ggcggatccg
     6781 tgctgcgggt aaagcggctg gttttctggc tgtggctcct gatatggcgc agcaatgcct
     6841 ggcgtgggga gcgaactttg tcgctgttgg cgttgacacg atgctctaca gcgatgccct
     6901 ggatcaacga ctggcgatgt ttaaatcagg caaaaatggg ccacgcataa aaggtagtta
     6961 ttgatatcaa aggcccatgg ggatcggctg tgggcctgtg ttaattagtg gttattcgct
     7021 gccagatcgg cttcgcttag ctgggtggcc gcgagcacct ggtcacgatc aatgccctgt
     7081 tccagcatgc gcaaagcaat tttaatggct tgttcatgca taccttcctg ccagccaatt
     7141 tgatgccctt cctgccgtag ccgttcagca atagtcatta atctctcctt ttgtagtggt
     7201 gaacgttcgg caatctcctc aataaaacgg gtgaaacggg aggtatcgcc gcattgcagc
     7261 agataattaa acagtgtttg tagctggctg tcattagtga agcctctaac caaaagcgtg
     7321 gtgatcctgt cgaccatgcc gattaaatcg cggtcgcgaa tatgcttttg aatcagttcc
     7381 agcagagcta tacgccgatg ttgcatgatc tcatcgtcag gtacgatggt gatatccacc
     7441 aacggaaaag cttcggtgta caactgccgg gcaagttgcg gatcgtcaaa ctcatccagc
     7501 cagttaagtg agtacgggta gggcgatgtt tcgccatgat aaaacagcaa tggcaccacc
     7561 agcggaactc tgtcatagcc tttatccagg tgacgctgca tggcggcagt ggcatagcgc
     7621 attagccgaa aagccatatt cttttctgca gagctttgat gttcaatcac gcagtagata
     7681 tagccgtcac cgtcgctggt ttccacggac cacaaaacat ccgagtagta agcgcgtaaa
     7741 cttttttcaa taaaactagt gggttccagg cgtaaggttt gcaggttgca aagcttgcgc
     7801 agtggttctg gtaaatgtat ttcgagaaaa tcccgtgcgg tttcgggtgt gaacataaag
     7861 gttttaaata ccgcatcatg cggggaggag gttgttgatt cggtcatggt tgtccgtcac
     7921 ctgatattta tgatgacgcg acattacggt tatcctaggc ctttgacatc tgccagtttc
     7981 agcctttgcg agacgttttc agaggaattt tcactgcgtt gcaacgcata cattgggcac
     8041 ggaatcgtgt acgcaaaaat gcccggtaac cacatgctta ccgggcatca gaaaggagtt
     8101 taagccagcg cctgggccag tagcgtaatc ggatgttcgc agcgaagact tgtggacatc
     8161 tcaatctgcc atttacaggt ttcgcagtcg gtgaccacca gatctgcgcc gctttcttct
     8221 atctggcgga acagtggtgc gccgatggct tgtgaggtgg ggtagttctc ttttttgaaa
     8281 ccgtaagtac ccgcaatacc gcagcactgg gaatccagca ccgttaactc aagccccggg
     8341 attttacgca acagctccag ggtgtagagc gtccagccca ttttttccat atggcacgga
     8401 gtgtgataaa ccactttcag cggcagcggt ttcagcggta acgttttgcc ttcgtccagc
     8461 ttgcgccaca gccagcgggt tgccagttcg atatgatcgc gcaagccttt gttgtcgaca
     8521 ttcagcactt ccgggtattc gtcgcgcagg gcaaatgtac aggttgagga ggtggcaatc
     8581 accggaatgc cttttactcc cacagcttcg cggatcgact ctacattcgt aattgcctgt
     8641 ttgcgtgctt tatcggtaaa gccgttggcg attagcggta cgccgcagca tttttctttg
     8701 ctgagcagtt gtacaccggt acccattgcg ttgagcactt taattaaatc tttacctaac
     8761 tgcggatggt tgtagttaac gaagcagccg tgaaagaaag cgacctggtc tttatattgt
     8821 gcttgctgag ccgctatgct gcgataccag cgacggaacg tgccgaagga gtatttcggt
     8881 agcgtgcgac gatgatcgat ttttaacgcc gcatcaagca gctgccgcac cggtttcagc
     8941 gaggtagcgg tgttgacgat tggtgcgaac ggcgtggaaa cgctacccat caggtcggta
     9001 tgactcaaca caaaattacg cagcgacggg cgcgtggtgt catattttgc ccgcgcgcgc
     9061 tggataatat cgccaatctt cacatcggac gggcaggcga cttcacaacg tttgcagttg
     9121 atgcaatatt tcagcgcctc gtcatacagt gcgccatctt tcaaacgcag acgctcgcca
     9181 tccggcccgg cttgttttgg ccctggataa ccgggattca cccggctcac cgggcaggcg
     9241 gtggtgcaga cggtgcactt aatgcagttt tcgaagctgg tgtcgttcat tgttggcctc
     9301 ctgcgcgttg ggcaatctgt tgagcggcat gtaaagcact gacggcacaa acaccgccgc
     9361 cgcatccctg ggcgatggga tcaaatccgc ccagcaccga accgatggca aacaggttct
     9421 caatggtttg ccctgcctgc gacgggcgta gcgtctcatc agtggttaca ccgaactgct
     9481 gccacggttg cggcgcaaaa aaatcgccct tataccattc accccgcgtg gcggtttgta
     9541 gcacatcaag gccgagaatc ggctcgcgaa tgccgttacg ttccgctacc agtccgccac
     9601 taaagaaact gccgctggcg agaaccgcga aatgtggacg tagcggaata tcggcgtgat
     9661 tgcgggtcca gatttcattc actacgccat ttttacaggt cacttttttc acttcatcgc
     9721 ccggcatcca cacgccaccc tggcgcacaa actggcgctg taactggttt tgcagacgaa
     9781 tgcccagcac ggaaggcggc agcgttggca aaagcatcag tgaacaaagt agtttttcat
     9841 tcaaccaacg ccacagtttg tcatcggcca ggccgaagca ggcaggcatc aggatcattt
     9901 cgcaggtatt ggcgacagga ataagcgcat caagtaacag cggccagttt tcttcattat
     9961 caaggaaacg ggcgatattc acagcgcgaa attcggtggc gttattgcgc aggacatcca
    10021 gttccggcag ctctatttct gcggtttcaa ccgaaagatc cagttcgtgc aacgaagccg
    10081 ccgcaagatg cgcctgaaaa tccatcaggc cgcttatccc gaccacacat attttcttcg
    10141 cgggcaacgg ccagacgggg acttctggcg aacttagcca ggtagagcgc agagtgccga
    10201 gcggcgtaat ccgctggtga gccagttcta cgctgccctg caattgcgca ccgctttcag
    10261 cgattaatgc ctgcgcctgg caagcgagat cgagcacgcg ttgtggcccg agaagagagt
    10321 aaggatgtgc aggtgcctgc tgacgcaaag attccagtcc actgtgaatg tctgccacgg
    10381 gttgaccatc tggcagatgg ctcagcaaat ccagcgaacc ggatgagaaa tgcaacgcgc
    10441 tttgaccacg cgtgacaatg gcacagcgca ggccgtgttt ttgcagttgc aggccacaga
    10501 gtaatccggc gaggccgccg cccataatga cagtatcaaa gcgcatcttt ctgctccttc
    10561 tccagaccac acagtccctg ataaacccag cgggtaaatt cgctttcgcg cagtgcgtct
    10621 ccccaggcga tgggttgcac gcctttccag cgttcgttaa ggaaggtgga aagttgctcg
    10681 atagattgcg cggacgtcgt gacgttaaac cgttgcagca gtccggcagc gcggcaggcg
    10741 cagagttcgc cctggcaggt gcccatcccc acacgggtac gacggcgtaa atccagcagg
    10801 ctattaacgt ttaaattttc taccgcgtac tgcacttcac ccgcagttac cgcttcgcac
    10861 tcacatacca ggctacggtg cagacggcct tcgctcagcc aggcaggcgt gcgatcgcca
    10921 tgacgataaa ccgcagaacc gcgcagcggg gcaggcaggg agatgacttt acgcaaggta
    10981 acttcagcgg gttcttgtga accaggcagt gccagatcgg cagtcgtaca ggggcgcgtg
    11041 ttgcccagtt tgcggcatac cgcgtcggta gcccattcag ccatcagccg ataggtcatc
    11101 agtttgccac cggtgatggt gataaatccg tccagaccat cgcgttcagc atggtcgagc
    11161 agcacgatgc cacggctgac gttacgtccg ctcggatcgt catcgctggc aaccagcggg
    11221 cgcacgccag aataggcccg caaaatgcgc gttttcgcca tcacgggggc cagtttttcc
    11281 ccttcacgca gcagaatatc aacctcttct gccgtcactc gattatcgtc aatctcgttg
    11341 taatcaatac gtaaagaggt ggtaccaatc agcgaaatgg tatcgccagg caccagaata
    11401 tcggcgtcgg aaggtttacg gcagcggttg atcacatgct ggttaatgcg gtgatccatg
    11461 atcagcagcg atcctttcgc cgggaacatg cgaatgcgca gatcggcata ttcggcaatg
    11521 tgttgccccc agatcccagc ggcattaacc acgacaggtg catgaagggc ctgagtttcg
    11581 ccggtgagat ggttacgtac acgaacaccg cacaccgtcg cgccttcacg aatcagcccc
    11641 gtgacttcat gagcggtaag gataacggca ccgtgttctt tggcatccag catgtttgct
    11701 gcggtcagac gaaatggatc aacggtgcca tccggaactt tcaccgcgcc aatcagtgcc
    11761 gggttaacgg caggttcgat aatgcgcgct tgctgcgggt ctatagcttc tgcgctgatc
    11821 cctgcttctt cgcaggcgcg aataaaagtg gcctggaatg agaggtcatc ttccggcagg
    11881 gtgataaaca ggccgttggt tggttcaacg cagtgacgtg caatgcgttt caggatctgg
    11941 ttttcactaa tgcattcgcg ggccgattcc gcatcggtta ccgcatagcg cgcaccgctg
    12001 tgcagcaggc cgtggttacg cccggtggca ccggttgcga tgtcgtggcg ctcaaccaaa
    12061 atcacgcgca gcccgcgcag ggcacagtcg cgggcaatcc cggctcccgt tgcgccgccg
    12121 ccaatgataa tcacgtcact tgattgcgag tcgcgagttt tcattgttat ccctctgaag
    12181 ttcgtttttt accatttagc catagtaaaa acatgaattg tttgatttcg cgcatgttcg
    12241 ctcataattc gaaagtgaaa cgtgatttca tgcgtcattt tgaacatttt gtaaatctta
    12301 tttaataatg tgtgcggcaa ttcacattta atttatgaat gttttcttaa catcgcggca
    12361 actcaagaaa cggcaggttc tctcactgaa tcaggctgtt aatcataaat aagaccacgg
    12421 gccacggagg ctatcaatgt tgagtatttt taaaccagcg ccacacaaag cgcgcttacc
    12481 tgctgcggag atcgatccga cttatcgtcg attgcgctgg caaattttct tggggatatt
    12541 ctttggctat gcggcttact atttggttcg taagaacttt gcgcttgcta tgccttatct
    12601 ggtcgagcag ggattctctc gcggtgattt aggtttcgcg ctttcgggga tctcgatcgc
    12661 ttatggattt tcgaaattca taatgggttc ggtatcagat cgctcgaatc cgcgcgtttt
    12721 cctccccgca ggtttgattc tggcggcggc agtgatgttg tttatgggct ttgtgccatg
    12781 ggcgacgtcg agcattgcgg tgatgtttgt acttttgttc ctctgcggtt ggttccaggg
    12841 gatggggtgg ccgccgtgtg gtcgtactat ggtgcactgg tggtcgcaga aagaacgtgg
    12901 cggcattgtg tcagtgtgga actgtgcgca caacgttggt ggtggtattc cgccgctgct
    12961 gttcctgctg gggatggcct ggttcaatga ctggcatgcg gcgctctata tgcctgcttt
    13021 ctgcgccatt ctggtggcat tattcgcctt tgcgatgatg cgcgataccc cgcaatcctg
    13081 tggcttgccg ccgatcgaag agtacaaaaa tgattatccg gacgactata acgaaaaagc
    13141 ggaacaggag ctgacggcga agcaaatctt catgcagtac gtactgccga acaaactgct
    13201 gtggtatatc gccatcgcca acgtgttcgt ttatctgctg cgttacggca tcctcgactg
    13261 gtcaccgact tatctgaaag aggttaagca tttcgcgctg gataaatcct cctgggccta
    13321 cttcctttat gaatatgcag gtattccggg cactctgctg tgcggctgga tgtcggataa
    13381 agtcttccgt ggcaaccgtg gggcaaccgg cgttttcttt atgacactgg tgaccatcgc
    13441 gactatcgtt tactggatga acccggcagg taacccaacc gtcgatatga tttgtatgat
    13501 tgttatcggc ttcctgatct acggtcctgt gatgctgatc ggtctgcatg cgctggaact
    13561 ggcaccgaaa aaagcggcag gtacggcagc gggctttacc gggctgtttg gttacctggg
    13621 cggttcggtg gcggcgagcg cgattgttgg ctacaccgtg gacttcttcg gctgggatgg
    13681 cggctttatg gtaatgattg gcggcagcat tctggcggtt atcttgttga ttgttgtgat
    13741 gattggcgaa aaacgtcgcc atgaacaatt actacaaaaa cgcaacggag gctaatggca
    13801 tgaaattgac gctgaaaaac cttagcatgg cgatcatgat gagcactata gtcatgggaa
    13861 gcagtgcaat ggcggcggac agcaacgaaa aaatagtcat cgcccatcgc ggtgccagtg
    13921 gatatttgcc ggagcatacg ctgccagcaa aagcgatggc gtatgcgcag ggagcggatt
    13981 atctggaaca ggatttggtg atgaccaaag acgaccatct ggttgttctg catgaccatt
    14041 atctcgatcg tgttactgat gttgccgatc gtttcccgga tcgggcgcgc aaagacggtc
    14101 gttactacgc gatagatttc acgctggatg aaattaagtc gttgaaattt accgaaggtt
    14161 tcgatattga aaacggtaaa aaagtgcaga cttatccggg gcgtttccca atgggtaagt
    14221 ccgacttccg ggtgcacacc tttgaagaag agattgaatt tgttcagggg ttaaatcact
    14281 ctaccgggaa aaatatcggt atttatccag aaatcaaagc gccgtggttc catcatcagg
    14341 aagggaagga tattgcggca aaaacgctgg aagtgctgaa gaaatatggt tacaccggta
    14401 aagacgataa agtttatttg caatgttttg atgctgatga gctgaagcgt attaagaatg
    14461 agctggaacc caaaatgggc atggagctca atctggtaca gctgattgcc tataccgact
    14521 ggaatgaaac gcagcagaaa cagccggatg gaagctgggt taattacaac tacgactgga
    14581 tgtttaagcc gggtgccatg aaacaggtgg cggaatatgc agatggtatt ggtccggatt
    14641 accatatgtt gattgaggag acatcgcagc cgggtaatat caaactcact ggcatggtgc
    14701 aagatgctca gcagaataaa ctggtagtgc atccttatac cgtgcggtca gataaactgc
    14761 ctgaatacac tcctgatgtg aatcagttat atgatgctct gtataacaaa gcgggtgtaa
    14821 atgggctgtt tactgatttc cctgataagg cagtaaaatt tcttaataaa gagtaatgtt
    14881 actgcaggat ggcgttcatg cgccatcctg tctcatatca aatttttcca atcgccacta
    14941 attgttccat gcacatttgt agtaaaaaca gtggactgcc ttctaccggc ttttctttag
    15001 ccagcaacga aatctgtcga tagaaagttg gttcgagagg aacggaacac aattcacctg
    15061 caatgctttt cagcgttaac tctggttgta aggcgatgcc taatccctgt cgaataaaat
    15121 tcatcgctgt atccgcctga ttaaattcac attttatctg ctgggcgcac tattagtggt
    15181 agtggctggt ggaatctatg cgctgcaaat gaagggtaaa agcggtgtca agctagtagt
    15241 ggcaaaagaa attcattaat acgacacgtt tcattaagat tttcctcagg taaccaccta
    15301 tagtcattgt cgttaataaa aacgacaggc gatagggtat ggcagtttca gcaaagtacg
    15361 acgaatttaa tcactggtgg gcaacagagg gcgactgggt tgaagagcct aactatcgcc
    15421 gtaatggtat gagcggggtg caatgcgtcg agcgcaacgg caaaaagctg tatgtaaagc
    15481 gcatgacgca tcatctgttt cattctgtac gttatccgtt cggccgacca acgattgtcc
    15541 gtgaggttgc ggtaattaaa taactggaac gggccggtgt catcgtgccg aagatcgttt
    15601 ttggtgaagc ggtgaaaatt gagggtgaat ggcgagcgtt gctggtgact gaagatatgg
    15661 cggggttcat cagcattgct gactggtatg cccagcatgc agtatcgcct tattctgacg
    15721 aagtacggca agccatgttg aaagcagtgg cgctggcgtt taagaaaatg catagcatta
    15781 atcgtcagca tggctgttgt tatgttcgcc atatctatgt gaaaacagaa ggtaaggcag
    15841 aagctggttt tcttgacctg gagaaaagtc gtcgccgctt gcgtcgcgat aaagcgatta
    15901 atcatgactt ccgccagctg gaaaaatatc tggagccaat ccccaaagcg gactgggagc
    15961 aggtgaaagc gtattactac gccatgtaat cgttgtaggc cagataagac acataagcgt
    16021 tgtatctggc actacaacca attcacatct cgatttcaat atcgcctttt gcccggcaac
    16081 aacagggcaa aatttccccc ggctgaataa aggctaacgg ttcggcaatc cagtcaactt
    16141 gacctgcaac caggcgtgtg cgacaggagc cgcagtaacc ttcgcgacac tggtactcaa
    16201 ccgccacatt gtgggattcc agcgctgcca gaagggaagg gtgttcatcc tggcacagca
    16261 gttgtgtgcc agtgatgcgc agggtaacgc gggccatcag agctggaagt tactcaaatc
    16321 gtcggtgtcc acttccgagt caatctgccc gaccagataa gaactgactt ccacttcctg
    16381 cggagcaacc tgcacgttat cagacaccag ccaagtgttg atccacggga tcgggttgga
    16441 gcgcgtctgg aacggcagat ccaaaccgac tgcctgcata cggatattgg tgatgtattc
    16501 aacgtactgg cagagaatgt ctttattcag accaatcatc gaaccgtcgc ggaacagata
    16561 atccgcccag tctttctcct gttgagctgc ctgaacaaac aggtcatagc actcctgctt
    16621 acactcttcg gcaatttccg ccatctcagg atcgtccgcg ccgctgcgca gcagattcag
    16681 catatgctgg gtgccggtca ggtgcagggc ttcgtcgcgg gcaatcaggc gaataatttt
    16741 ggcgttgcct tccatcaatt cgcgttctgc aaaggcaaag gaacaagcaa agctgacgta
    16801 gaagcggatc gcttccagcg cgttaacgct catcaggcaa agatacagtt ttttcttcag
    16861 ctcgcgcagg ctaacggtta cggttttacc gttaacggtg tgggtgcctt cgcccagaag
    16921 gtgccagtag ctggtcattt cgatcagttc atcgtaatag ctggagatcc cttccgcacg
    16981 tttctggatc tgctcgttgg tgacgatatc gtcaaacaca acagacggat cgttaacgat
    17041 attacgaatg atatgagtat aggaacggga atgaatcgtt tctgagaacg cccaggtttc
    17101 gacccaggtt tccagttccg gaatagaaat aagcggcaat agcgccacgt tcggactacg
    17161 accctgaatg gaatccagca gcgtctgata tttcaggttg ctgataaaaa tgtgtttttc
    17221 gtgctccggc agcgcctggt aatcgatacg gtcgcgggag acgtcaactt cttccggacg
    17281 ccagaagaaa gagagctgct tttcgatcag cttttcgaag atgtcatatt tttgctgatc
    17341 gtagcgggcc acgttgaccg gctgaccaaa gaacatcggt tctttgagct gatcattttt
    17401 cgtctgtgaa aaggtggtat atgccatgag tgtgtcctgt tgggagttta atgccggata
    17461 aggcatttta cgccgcatcc tgtgcctgat gcgacgctgg cgcgtcttat caggcctaca
    17521 aatccgagcc gtaggccgga taaggcgttc acgctgcatc cggcatctca atatcagatc
    17581 ttacatgcgc cgctttcgca gccatcgtcc tggattgacg gtaccagatc gtcctgcgcg
    17641 tcttcagcgc cgtcacgggt gttctgataa tacagcgttt tgaccccgaa tttgtaggcg
    17701 gtgagcaggt ctttcagcaa ctgctgcatc ggcacttttc ctgacgggaa acgtgacgga
    17761 tcgtagttgg tgttagcaga gatcgactga tcgataaatt tctgcatgat acctaccagt
    17821 tgcaggtagc catcgttacc cggcatttcc cacagcagct cataggcgtc gtgcaggtgc
    17881 tcgtagtccg gcaccacctg gcgcaaaata ccgtctttcg acgctttgat gctgacgtaa
    17941 ccgcgcggcg gttcaatacc gttagtggcg ttagagatct gcgaagaggt ctcggacggc
    18001 atcagggcag aaagcgtgga gttacgcagg ccgtgcgttt tgattgattc acgcaatgct
    18061 tcccagtcgt aatgcagcgg ctcattagcg atggcatcca gatctttctt ataggtatcg
    18121 atcggcagga tccctttcgc gtaagtggtt tcgttaaacc acgggcactc gccttgctct
    18181 ttagccagct cattagacgc tttcagcagg taatactgaa tcgcttcgaa ggttttatgc
    18241 gtcaggttgt tggcgctgcc gtcggagtag cgtttaccgt gcttcgccag gtagtaagcg
    18301 aagttgatca caccaatacc cagcgtacga cgacccatcg ctccacgttt ggcggccggg
    18361 atcgggtaat cctgataatc cagcagcgcg tcaagtgcac gaaccgccag aattgccagc
    18421 tcttccagtt catccaggtt attaattgcg cctaggttga aagcagacag cgtacacagc
    18481 gcgatttcac cgttctcgtc gttgacgtcg ttcagcggtt tggtcggcag ggctatctcc
    18541 aggcacaggt tagactgacg cactggcgcg atggccggat caaacgggct atgggtatta
    18601 cagtggtcaa cgttctgaat atagatacga ccggtagacg cacgttcctg catcatcagc
    18661 gagaacagct caacggcttt cacacgctgc ttgcggatgc tgtcgtcttt ctcatatttg
    18721 gtatacagac gttcaaactc ttcctgatcg gcgaagaacg cgtcgtacag ccccggtacg
    18781 tcggacgggc tgaacagggt gatatcttca cctttcagca gacgggtata catcagtttg
    18841 ttgatttgta ccccgtagtc catatgacgc acgcggttgc cttccacacc acggttgttt
    18901 ttcaacacca gcaggctttc cacttccaga tgccacatcg ggtagaacag cgttgccgca
    18961 ccgccgcgca caccgccctg agagcaggat ttcaccgctg tctggaaatg tttgtagaac
    19021 ggaatgcagc cggtatggaa cgcttcacca ccgcgaatcg ggctacccag cgcacgaata
    19081 cgcccggcgt tgatgccgat cccggcacgc tgggaaacgt atttaacaat cgcgctggag
    19141 gtggcgttga tggaatccag gctgtcaccg cactcgatca gtacgcagga gctgaactga
    19201 cgagtcgggg tacgcacgcc ggacatgatt ggcgtcggca gcgaaatttt aaatgtggaa
    19261 accgcgtcgt aaaaacgctt cacatattgc aggcgcgttt cacgcgggta gttcgagaac
    19321 aggcacgcgg caaccagaat ataaaggaac tgggcgctct catagatttc gccggtcacg
    19381 cggttctgta ccagatattt gccttccagc tgcttaacgg cagcataaga gaaggtcata
    19441 tcacggtcgt gatcgataaa cgtgtccatc tgcttgaact cttcttccgt gtagtcttcc
    19501 agcagatgat tatcgtattt gcccatctcg accattttca ccacgtggtc gtacagcgca
    19561 ggcggctcaa actggccgta ggctttttta cgcaggtgga agatcgccag gcgcgcggcg
    19621 agatactgat aatccggcgc atcacgggag atcaggtctg cggcagcctt gataatggtt
    19681 tcgtggatgt cagaggtctt gataccgtca taaaactgaa tgtgggagcg cagctcgacc
    19741 tgggaaatcg aaacgttatg cagtccttct gccgcccaat ccagaacgcg atggattttg
    19801 tcgagattga tgcgctctgt gctaccgtcg cgctttgtca ccagcagatt ctgattcatg
    19861 tatgtcgtac ctgtttttgg aattctttcc gcaatagttt catgcagact acctgtagta
    19921 cgggaagctg cttagaacac tatatatagg gggtatgttt gggattcact gcaagatagt
    19981 gtgaaaatgg ccctcttgca agtgcataac tttgtggata actcaggaag gaaaaagtgg
    20041 ctttcgcgca ccttaggtca gacaaggtgt ccgggaaagt caatgggaag agaaaaattt
    20101 gttaaaaata actgttcggc gatttcttga acggcagaat aggttggata aattgatata
    20161 gatggtttat taatcttttt gctaatgatt gcaaaaattg atctaagcac gagtcatcac
    20221 ataatctgat gtatcagttg tggtcaatat ataagcgaat gtaagcgatt gttgatgtcg
    20281 aaatggttgt tttctattcg gttattgtta aatgcgaagc cattttgtta atttacctta
    20341 tattataaaa aaattattca ttactttaat ttagtttaaa tataactggt atcccttaag
    20401 gttattaact tgaattatga cgcactgata ttattcatca aataataaca aaatagccat
    20461 tgcatcgggt tggacaattt acaaaagaaa gataacccat attgtataat gcgtttaaat
    20521 atgccgtctt atataaaatg atggtcagat taatatgcgg atta
//
LOCUS       DAJVUK010000065        20562 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.065, whole genome shotgun sequence.
ACCESSION   DAJVUK010000065 DAJVUK010000000
VERSION     DAJVUK010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20562
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.065"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            144..347
                     /locus_tag="OQQ57_002191"
     CDS             144..347
                     /locus_tag="OQQ57_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HCS1956948.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLLRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
     gene            355..1287
                     /gene="aaeA"
                     /locus_tag="OQQ57_002192"
                     /pseudo
     CDS             355..1287
                     /gene="aaeA"
                     /locus_tag="OQQ57_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417708.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
     gene            1293..3260
                     /gene="aaeB"
                     /locus_tag="OQQ57_002193"
     CDS             1293..3260
                     /gene="aaeB"
                     /locus_tag="OQQ57_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HCS1956949.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IIADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTGLQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQQRLLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            3352..3624
                     /locus_tag="OQQ57_002194"
     CDS             3352..3624
                     /locus_tag="OQQ57_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HCS1956950.1"
                     /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
                     DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH"
     gene            complement(3680..3943)
                     /gene="yhcN"
                     /locus_tag="OQQ57_002195"
     CDS             complement(3680..3943)
                     /gene="yhcN"
                     /locus_tag="OQQ57_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HCS1956951.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
     gene            complement(4309..4779)
                     /gene="argR"
                     /locus_tag="OQQ57_002196"
     CDS             complement(4309..4779)
                     /gene="argR"
                     /locus_tag="OQQ57_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HCS1956952.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
     gene            5214..6152
                     /gene="mdh"
                     /locus_tag="OQQ57_002197"
     CDS             5214..6152
                     /gene="mdh"
                     /locus_tag="OQQ57_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HCS1956953.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK"
     gene            complement(6215..7282)
                     /gene="degS"
                     /locus_tag="OQQ57_002198"
     CDS             complement(6215..7282)
                     /gene="degS"
                     /locus_tag="OQQ57_002198"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HCS1956954.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGVNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
     gene            complement(7372..8739)
                     /gene="degQ"
                     /locus_tag="OQQ57_002199"
     CDS             complement(7372..8739)
                     /gene="degQ"
                     /locus_tag="OQQ57_002199"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HCS1956955.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDCGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            complement(8893..9291)
                     /locus_tag="OQQ57_002200"
     CDS             complement(8893..9291)
                     /locus_tag="OQQ57_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HCS1956956.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            9485..10612
                     /gene="zapE"
                     /locus_tag="OQQ57_002201"
     CDS             9485..10612
                     /gene="zapE"
                     /locus_tag="OQQ57_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HCS1956957.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLHDETRAQMDKLWLALAGAKRENSPTLEINHRPLATMGAENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            10830..11258
                     /gene="rplM"
                     /locus_tag="OQQ57_002202"
     CDS             10830..11258
                     /gene="rplM"
                     /locus_tag="OQQ57_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HCS1956958.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKCTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            11274..11666
                     /gene="rpsI"
                     /locus_tag="OQQ57_002203"
     CDS             11274..11666
                     /gene="rpsI"
                     /locus_tag="OQQ57_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HCS1956959.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            12061..12699
                     /gene="sspA"
                     /locus_tag="OQQ57_002204"
     CDS             12061..12699
                     /gene="sspA"
                     /locus_tag="OQQ57_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HCS1956960.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            12705..13202
                     /gene="sspB"
                     /locus_tag="OQQ57_002205"
     CDS             12705..13202
                     /gene="sspB"
                     /locus_tag="OQQ57_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HCS1956961.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
                     LRVVK"
     gene            complement(13245..14611)
                     /gene="dcuC"
                     /locus_tag="OQQ57_002206"
                     /pseudo
     CDS             complement(13245..14611)
                     /gene="dcuC"
                     /locus_tag="OQQ57_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417694.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
     gene            14991..15782
                     /gene="nanR"
                     /locus_tag="OQQ57_002207"
     CDS             14991..15782
                     /gene="nanR"
                     /locus_tag="OQQ57_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HCS1956962.1"
                     /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            15904..16797
                     /gene="nanA"
                     /locus_tag="OQQ57_002208"
     CDS             15904..16797
                     /gene="nanA"
                     /locus_tag="OQQ57_002208"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HCS1956963.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            16906..18396
                     /gene="nanT"
                     /locus_tag="OQQ57_002209"
     CDS             16906..18396
                     /gene="nanT"
                     /locus_tag="OQQ57_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HCS1956964.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVSGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
     gene            18444..19133
                     /locus_tag="OQQ57_002210"
     CDS             18444..19133
                     /locus_tag="OQQ57_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HCS1956965.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            19130..20005
                     /gene="nanK"
                     /locus_tag="OQQ57_002211"
     CDS             19130..20005
                     /gene="nanK"
                     /locus_tag="OQQ57_002211"
                     /EC_number="2.7.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312122.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HCS1956966.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPQALRDA
                     LAALVAPLQAHAQQVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLSNLPTIA
                     INDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELMGADARTIFTRAGQGDEQAQQLIHRSA
                     HVLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            20002..20466
                     /locus_tag="OQQ57_002212"
     CDS             20002..20466
                     /locus_tag="OQQ57_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HCS1956967.1"
                     /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA"
BASE COUNT         4944 a         5113 c         5362 g         5143 t
ORIGIN      
        1 tagataacag cataacagtt acgctaatat attaaatatc aatctacagc aatgttgctc
       61 tcgcccggct ttccatgccc ttctctgcgg cgacagatgc tgaaaataat aacgcctgct
      121 ctctctatac aaccaaggtc aacatgagtc tgtttcccgt tatcgtggtg tttgggctgt
      181 ccttcccacc gatatttttt gaattgcttt tatcactggc gattttctgg ctgctgcgcc
      241 gggtacttgt gccaacaggt atctacgact ttgtctggca tccggcgttg ttcaacaccg
      301 cgctctattg ctgcttgttt tatttgatat cgcgactgtt cgtttgaggt tgaagtgaaa
      361 acactaataa gaaaattctc ccgtacggcc atcacggtcg tattagtcat tctggccttc
      421 atcgcaattt ttaatgcctg ggtctattac accgaatccc cctggacgcg tgacgcgcgc
      481 tttagcgctg acgtcattgc gatcgcgccg gacgtttctg gactcattac ccaggtgaat
      541 gttcatgata accagctggt gaaaaaagga cagatactgt tcaccatcga ccagccgcgc
      601 tatcaaaagg cgcttgagga agcgcaagcc gatgttgctt attatcaggt actggcacag
      661 gagaaacgcc aggaggccgg acgtcgtaac cgtctcggtg tgcaggcgat gtctcgcgaa
      721 gagatcgact aggctaacaa cgtactacaa acggttctgc atcagttagc gaaagcgcag
      781 gcgacccgcg atctggcaaa actggatctt gaacgcacgg tgatccgcgc gccagcagat
      841 ggctgggtga ccaacctcaa cgtctatacc ggtgagttta ttactcgagg atcaacggcg
      901 gttgcgctgg tgaaacagaa ctccttctat gtactggcct atatggaaga aactaagctg
      961 gaaggggtgc gtccggggta tcgtgcagag atcacgccgc ttggcagtaa caaagtgctg
     1021 aaagggactg ttgatagtgt tgccgcaggg gtcaccaacg ccagcagcac gcgtgacgac
     1081 aaagggatgg cgactataga ctctaacctt gaatgggtgc gtcttgcgca acgtgttccg
     1141 gttcgtattc gtctcgacaa ccagcaagag aacatctggc ctgcgggcac cactgctaca
     1201 gtggtggtca ctggcaaaca agatcgcgac gaaagccagg attcgttctt ccgtaaaatg
     1261 gcccatcgcc tgcgtgagtt tggttaatca cgatgggtat tttctccatt gctaaccaac
     1321 atattcgctt tgcggtaaaa ctggcgaccg ccattgtact ggcgctgttt gttggctttc
     1381 acttccagct ggaaacgcca cgctgggcgg tactgacagc ggcgattgtt gccgccggtc
     1441 cggcctttgc tgcgggaggt gaaccgtatt ctggcgctat tcgttatcgt ggctttttgc
     1501 gcatcatcgg cacatttatt ggctgtattg ccggactggt gatcatcatt gcgatgatcc
     1561 gcgcaccatt attgatgatt ctggtgtgct gtatctgggc cggtttttgt acctggatat
     1621 cctcgctggt acgaatagaa aactcgtacg cgtgggggct ggccggttat accgcgctga
     1681 tcattgtgat caccattcag ccggaaccat tgcttacgcc gcagtttgcc gtcgaacgtt
     1741 gtagcgagat cgttatcggt attgtgtgtg cgattatagc ggatttgctc ttttctccgc
     1801 gatcgatcaa acaagaagtg gatcgagagc tggaaagttt gctggtcgcg caatatcaat
     1861 taatgcaact ctgtatcaag catggcgatg gtgaagttgt cgataaagcc tggggcgacc
     1921 tggtgcgacg caccacgggg ctacaaggca tgcgcagcaa cctgaatatg gaatcttccc
     1981 gctgggcgcg ggccaatcga cgtttaaaag cgatcaatac gctatcgctg acgctgatta
     2041 cccaatcctg cgaaacttat cttattcaga atacgcgccc ggaattgatc actgatactt
     2101 tccgcgaatt ttttgacacg ccggtagaaa ccgcgcagga cgtccacaag cagctcaaac
     2161 gcctgcggag agttatcgcc tggaccgggg aacgggaaac gcctgtcacc atttatagct
     2221 gggtcgcggc ggcaacgcgt tatcagcttc tcaagcgcgg cgttatcagt aacacaaaaa
     2281 tcaacgccac cgaagaagag atcctgcaag gcgaaccgga agtcaaagta gagtcagccg
     2341 aacgtcatca tgcgatggtt aacttctggc gaaccacact ttcctgcatt ctgggcacgc
     2401 ttttctggct gtggacgggc tggacttccg gcagtggtgc aatggtgatg attgcggtag
     2461 tgacgtcact ggcaatgcgt ttgccgaatc cacgcatggt ggcgatcgac tttatctacg
     2521 ggacgctggc cgcgctgccg ttagggctgc tctacttttt ggtgattatc cctaataccc
     2581 aacagagcat gttgctgctg tgtattagcc tggcagtgct gggatttttc ctcggtatag
     2641 aagtacagca acggctactg ggctcgatgg gggcgctggc cagcaccata aatattatcg
     2701 tgctggataa cccgatgact ttccatttca gtcagtttct cgacagcgca ttagggcaaa
     2761 tcgtcggctg tgtgctcgcg ttcaccgtta ttttgcttgt gcgggataaa tcgcgcgaca
     2821 ggaccggacg tgtactgctt aatcagtttg tttctgccgc tgtttccgcg atgactacca
     2881 atgtggcacg tcgtaaagag aaccacctcc cggcacttta tcagcagctg tttttgctga
     2941 tgaataagtt cccaggggat ttgccgaaat ttcgcctggc gctgacgatg attatcgcgc
     3001 accagcgcct gcgtgatgcg ccgatcccgg ttaacgagga tttatcggcg tttcaccgac
     3061 aaatgcgccg cacagcagac catgtgatat ctgcccgtag cgatgataaa cgtcgtcggt
     3121 actttggcca gttgctggaa gaacttgaaa tctaccagga aaagctacgc atctggcaag
     3181 cgccaccgca ggtgacggaa ccggttcatc ggctggcggg tatgctccat aagtatcaac
     3241 atgcgttgac cgatagttag gtcaaaacca acgccaaaag tgtcggtttt ttcatggcta
     3301 tacttagcga tgcacggcag aactcgccgc gaaacgtgac ggtggcaata gatgaatatt
     3361 tatacctttg attttgatga gattgagagt caggaggatt tttatcgtga ctttagccaa
     3421 acctttggtc tggcgaaaga taaggtacgc gatctcgact cactatggga tgtgttaatg
     3481 aacgatgtcc tgccgctacc acttgagatt gaatttgttc atctgggaga gaaaacgcgt
     3541 cgccgttttg gcgcgttaat attgctgttt gatgaggcag aggaagagct ggaagggcat
     3601 ttgcgtttta atgttcgtca ttagcgcaaa aaaaagcccc cgaaccgggg gcaatatcgt
     3661 cggacaagac gatgagggtt tatttgtaca gttcagccgt agcgtgccag gtgtcaccgc
     3721 tacgagcttc agtaatctgg taggccgttg cgcctttctc ttccgctttt ttgttcagca
     3781 tttcacgcat atccattggc gaagacgcca caccacttac ggatacggtc ccgattgctt
     3841 cacgattttg tgcttgtgca gcatcaatgg agtcggcagc gaatgcaccg aaagagagaa
     3901 cagaaagtac gcttaatgca gctacagtgg ttttgatttt catgattttt acctcgacat
     3961 aatcttttag ctgggccttt gttttgtgac ccatatcaca aaatcaagca tacactaatt
     4021 attgaactaa ttaataccac gctaactgtt tcagttgata ctaagtgtta aaaatgtgaa
     4081 ttttaataac gaaaaagaat taaaaacacg gtcatttatt tttaattcta gtattttcaa
     4141 ttagataatg aattttgcat aatgtgcttt ttttaccgta tgtattcatt atgtgaatga
     4201 catgtcgcag taaaactgca ctattcgtta aattaatcgc aggggaaagc agggggttga
     4261 gagggataag caacattttc cccgccgcca gaagcgacgg ggcagagatt aaagctcctg
     4321 gtcgaacagc tctaaaatcg cttcgtacag gtctttgacg gtgaaaccgt tagcaggggt
     4381 ggtaaagatg gtgtcatcgc cagcgatggt gcccagaata ccttctgctt tgcccagtga
     4441 gtccagcagg cgagcaatta actgcgccgc gccagggctg gtatgaatca cgacaactgc
     4501 atcgttgtag tcgatatcca gcaccagatt cttcaatgga ctggaggtgg ttggtacacc
     4561 cagttcagct ggcaggcagt aaaccatttc cattttggca ttgcgtgtac gtacagcacc
     4621 aaacttggtc aacatccgcg agactttaga ctgattaata ttgtcaaagc cttgctcctg
     4681 caacgcggcg acgatttcgc cctgggagct aaatttctct tctttaagta atgctttaaa
     4741 tgctttaact agttcttctt gcttagccga gcttcgcata agtcacccga tatggtggtt
     4801 gatacaacat tattgtgcat acagatgaat ttttatgcaa acagtcaacc ctgaagaagg
     4861 ctgaaataat gttatgaaag agcgggattt tatcaaattt cgttattgag aaacatgcct
     4921 gcgtcacggc atgcaaattc tgcttaaaag taaattaatt gttatcaaat tgatgttgtt
     4981 ttggctgaac ggtagggtat attgtcacca cctgttggaa tgttgcgcta atgcataagc
     5041 gactgttaat tacgtaagtt aggttcctga ttacggcaat taaatgcata aacgctaaac
     5101 ttgcgtgact acacattctt gatatgtggt cattgtaaac ggcaattttg tggattaagg
     5161 tcgcggcagc ggagcaacat atcttagttt atcaatataa taaggagttt aggatgaaag
     5221 tcgcagtcct cggcgctgct ggcggtattg gccaggcgct tgcactactg ttaaaaaccc
     5281 aactgccttc aggttcagaa ctctctctgt atgatatcgc tccagtgact cccggtgtgg
     5341 ctgtcgatct gagccatatc cctactgctg tgaaaatcaa aggtttttct ggtgaagatg
     5401 cgactccggc gctggaaggc gcagatgtcg ttcttatctc tgcaggtgta gcgcgtaaac
     5461 cgggtatgga tcgttccgac ctgtttaacg ttaacgccgg catcgtgaaa aacctggtac
     5521 agcaagttgc gaaaacctgc ccgaaagcgt gcattggtat tatcactaac ccggttaaca
     5581 ccacagttgc aattgctgct gaagtgctga aaaaagccgg tgtttatgac aaaaacaaac
     5641 tgttcggcgt taccacgctg gatatcattc gttccaacac ctttgttgcg gaactgaaag
     5701 gcaaacagcc aggcgaagtt gaagtgccgg ttattggcgg tcactctggt gttaccattc
     5761 tgccgctgct gtcacaggtt cctggcgtta gttttaccga gcaggaagtg gctgatctga
     5821 ccaaacgtat ccagaacgcg ggtactgagg tggttgaagc gaaagccggt ggcgggtctg
     5881 caaccctgtc tatgggccag gcagctgcac gttttggtct gtctctggtt cgtgcactgc
     5941 agggcgaaca aggcgttgtc gaatgtgcct acgttgaagg cgacggtcag tacgcccgtt
     6001 tcttctctca accgctgctg ctgggtaaaa acggcgtgga agagcgtaaa tctatcggta
     6061 ccctgagcgc atttgaacag aacgcgctgg aaggtatgct ggatacgctc aagaaagata
     6121 tcgccctggg cgaagagttc gttaataagt aattgattag cgaataataa aaaaccggag
     6181 cacagactcc ggttttttgt tttgagcact cgacttaatt ggttgccgga tattcctgaa
     6241 tggtgacctg cagcgttaac tgcttatcat cacgcatcac tacaaccggg atcaccgaac
     6301 cagggcgaat ttctgccacc tgatccatcg tctccagagc agagatggcc ggtttgttat
     6361 ccaccgaaat aatcagatcg ttgacctgaa tacccgcatt cgccgccggg ccgtcaggtg
     6421 acacttcatt aaccacgatc ccttgcagtt gatctatacc accgctctgc gcgtgcagtg
     6481 gtgcgatctc acgtccacca atgccaatgt agccgcggat cacgcgccca tcgcggatca
     6541 gcttatccat aattttggtt gctaactgga aaggaatcgc aaagccgata ccttccggcg
     6601 tttcgccatc gttactctta tcaaacgaca gcgtgttaat gcccatcagt tctcccagcg
     6661 agttcaccag cgcgccgcca gagttaccgt ggttaatgga agcatcggtt tgtaggaagt
     6721 tttgccgccc ggtagggttc agaccgattc gccccgtggc actaataatc ccttgggtaa
     6781 tggtctgccc gaggttgtac gggttaccga tcgccagtac tacgtcgcca atgtgcggta
     6841 cgcgacgtgc attaattgga atggtaggta aaccgccagt ggcattaatt ttaagtaccg
     6901 ccagatcggt tagagagtca gatcccacca gcaatgcttc aaatacacgt ccatcctgta
     6961 aggcgacgat gatctgatcg gcgtcgttga tgacgtgttt attggtgatg atataaccgc
     7021 gttgatccat gattacaccg gatcccaggg tgcggatctc aagctggttg tgagagttgg
     7081 tgttcacacc acggttgtaa acgttaacca ccgctggcgc ggcgcggcga accgccagat
     7141 tatagctggc aggcgtctca tcggtactgt caaattgcgg agtggaaagc gggttaaggc
     7201 tgcgcagcga aggcatggca accagcagaa tagcgccgac aattaatcca atcgcaacgg
     7261 aacgtaagag cttcacaaac atgatggagg cgtcattaaa aaagggaacg gcagcagcat
     7321 accacgagtt aaccggacat cacacgtaag cctgatgccc ggtttacgac attaacgcat
     7381 cagcagatag atgctttcat tgccgcgtac aatttgcagg gcgatgatgg ccggttttgc
     7441 cgccagcact ttacgcattt cagcaatcga gttcacccga tcgcggttga cgccaatgat
     7501 cacatcgtct ttttgcaagc ctgcctgagc agctgggctt cctttgacaa cttcatcgat
     7561 cttaatacct ttgccgcaat cttttagctg accatcgctc aacgttgcac cttccagcgc
     7621 tggcgtgatc atttcagcgc tggccgacga agaggtgctg gtatcaagcg tcacttctac
     7681 ttccagtggt ttgccgttac gcagcaggcc aagcttcact ttcgtgcccg gctctgtagt
     7741 cgcgatacga gagcgcaact cagcaaagct attcagcggt ttgccgttga ggctggtaat
     7801 aatatcgccc gctttgacgc ccgcttttgc cgagccagaa cctggcaaca cttcgctgac
     7861 aaacgcgcca cgctgcacgt caaggttgaa ggctttggcg atatcggcac tcatctcggt
     7921 gcctttgatg cctaacaaac cgcgtttgat ttcaccaaag tcgataagct gctgcgccag
     7981 tgttcgcgcc atattactgg ggatggcaaa tccaatcccg acgctcccgc cgccaggcgc
     8041 aaggattgca gtgttgatgc caattaactc accgttaagg tttaatagtg caccgccgga
     8101 gttaccgcgg ttaatggaag catctgtctg gataaagttt tccagacctt caagattcaa
     8161 cccgctgcgg cctaatgcgg aaacaatgcc agaggtggcg gtttgcccaa ggccaaatgg
     8221 gttaccgacc gctacggcaa aatcaccgac gcgcaattta tcggagtcgg caatagcgat
     8281 ttgcgttaat ttgctcgggt tttgaatttg taacagggcg atatcgctct ggtcatcgct
     8341 accaatcagt tttgcatcaa actcgcgccc atcattgagc tgaatactga ttttctgtgc
     8401 ctgattaatc acatggttgt tggtcagcac atagccttta ctggcgttga tgatgacacc
     8461 ggaacctaaa ccttcgaagg gttgtgcagg ttgatccggt aaatcatcac caaaaaactt
     8521 tttgaattct tccgggattt tctgtccctg actggccgtt ccttccaccc gtacgctcac
     8581 cactgccgga agcacttttt ccagcattgg agccagactg gggagagggg cctgatcggc
     8641 aacctggcct ggaatcgacg cgacggcctg aaatgacgcc gagagagtta acccgacact
     8701 taacgctaat gcactcaaca gctgggtttg ttttttcatt attcctgctc tcgtacctga
     8761 atgataagaa aagagattca aaacagtttg atgttattga attttcagac ggctaacaat
     8821 gagacaccag attaaatgat agtcggggag ggagagaaga ggagggcgca atggctgcgc
     8881 ccgaaaaata aattagtcgc gcttcgcgcc agtacgcagc aggccggatg caccttcaga
     8941 atagtcgcga ggcatctgca ccggtgcctg atcgttgctg gcttcagact ctgccagacg
     9001 attacggaac gggtttgctt cagcagacag ttccggcagc aggctgctgg agcttttcgc
     9061 catgtgctga tacagctggc gatagtcgtg cgccatggta tccagtaatt ccgcgctgcg
     9121 ggcaaagtgg ctaaccagct cttcgcgata ctcgtccagt tcagctttat tcttttccag
     9181 ttcgtactgc aacgcctgtt gctggcgtag tttacgatta ccaaaacgca tggccacagc
     9241 accaataatg atgccgacga ctaacccaat tagcgcatat tcccaggtca tgaacatctc
     9301 ccgttgtctt ttgtttccgt agggtgttgg cttcaggctc catgcctacg gctgattatg
     9361 ccactataac cgttaattcc acagaagtgg aatcccgact gcatatcgcg tagtgtagaa
     9421 cggccttttt ttcgtcaacc gtgaacaacg gcgcaccgat tattcaagga ataataataa
     9481 gatcatgcaa agcgttaccc caacatcgca atacctgaag gcgctcaatg aaggcagcca
     9541 tcaacccgac gacgttcaaa aagaggccgt cagccgcctg gaaattattt atcaagaact
     9601 catcaatagc aggccaccag cccccaggac gagtgggcta atggcgcggg tcggtaagct
     9661 gtggggtaaa cgcgaagaca caaagcatac gccagtgcgt ggcttatata tgtggggcgg
     9721 tgtaggacgc gggaaaacct ggctgatgga ccttttctat caaagcctgc cgggagagcg
     9781 gaaacagcgc ctgcactttc accgttttat gctgcgggtg cacgaagagc taactgcctt
     9841 acaggggcag accgatccgc tggaaattat tgccgatcgc tttaaagccg aaactgacgt
     9901 gctctgtttt gacgaatttt ttgtttctga tattaccgac gccatgctac ttggcggtct
     9961 gatgaaagcc ctgttcgccc gcggtattac cctggtagca acgtcaaata ttccgccgga
    10021 cgaactttat cgaaatggct tgcaacgtgc gcgttttctg cctgcaatcg atgccattaa
    10081 acagcattgt gatgtaatga acgtggacgc tggtgttgat tatcgactgc gtacactcac
    10141 tcaggcgcat ctgtggcttt cgccactcca cgatgaaacc cgggcacaaa tggataaact
    10201 atggttggcg ctggcgggag cgaaacgcga aaattcaccg acgttagaaa tcaaccatcg
    10261 accgctggcg acaatgggcg ctgagaatca gacgcttgct gtctctttta ccaccttgtg
    10321 tgtcgatgcc cgcagccagc atgactatat tgcgctctca cgcctctttc atacggtcat
    10381 gttgtttgat gtaccagtta tgacgcggtt gatggagagc gaagcgcggc gctttattgc
    10441 gctggtggat gagttttacg agcgccatgt caaattagtg gtgagtgcag aagtgccgct
    10501 gtatgaaatt tatcagggcg atcggctgaa gtttgagttc cagcgttgcc tgtcacgtct
    10561 gcaagagatg caaagcgaag agtatctgaa gcgcgagcat ttggcgggtt aaaacctgtc
    10621 acaaatcaca aaaaggggtc gatctttgac cccgacttct ctataatcct gcgaccccac
    10681 gttacaagaa agttttttcc caaaactttt tgtgtgctgg cataggctat tcgaaggggt
    10741 aggtttgccg gactttgtcg tgtgaacctc aacaattgaa gacgtttggg tgttcaccaa
    10801 cgtgtaacta tttattgggt aagcttttaa tgaaaacttt tacagctaaa ccagaaaccg
    10861 taaaacgcga ctggtatgtt gttgacgcga ccggtaaaac tctgggccgt ctggctactg
    10921 aactggctcg tcgcctgcgc ggtaagcaca aagcggaata cactccgcac gtagataccg
    10981 gtgattacat catcgttctg aacgctgaca aagttgctgt aaccggcaac aagtgtactg
    11041 acaaagtgta ctatcaccac accggccaca tcggtggtat caaacaagcg acctttgaag
    11101 agatgattgc tcgccgtcct gagcgtgtga ttgaaatcgc ggttaaaggc atgttgccaa
    11161 aaggcccgct gggtcgtgct atgttccgta aactgaaagt ttacgcgggt aacgagcaca
    11221 accacgcggc acagcaaccg caagttcttg acatctaatc gggattatag gcaatggctg
    11281 aaaatcaata ctacggcact ggtcgccgca aaagttccgc agctcgcgtt ttcatcaaac
    11341 cgggcaacgg taaaatcgta atcaaccaac gttctctgga acagtacttc ggtcgtgaaa
    11401 ctgcccgcat ggtagttcgt cagccgctgg aactggtcga catggttgag aaactggacc
    11461 tgtacatcac cgttaaaggt ggtggtatct ctggtcaggc tggtgcgatc cgtcacggta
    11521 tcacccgcgc tctgatggaa tacgacgagt ccctgcgttc tgaactgcgt aaagctggct
    11581 tcgttactcg tgacgctcgt caggttgaac gtaagaaagt cggtctgcgt aaagcacgtc
    11641 gtcgtccgca gttctccaaa cgttaattgg cttctgctcc ggcagaaaac aattttcgaa
    11701 aaaacccgct tcggcgggtt tttttatagc taaaatctga atcagcgtaa aaactggaaa
    11761 gttgcttttt gctgccacct gacagacagg taaaacaaaa accacatcgc caataaggga
    11821 ctaagtcaac tatttcagac taaagcgcat ctctttttcc ccatttccgg catcgactca
    11881 ccacaaaggt cgcaaaatct ggtaaactat catccaattt tctgcccaaa tgtcgggtat
    11941 tgctcatttt ttgtttgatt ttcgaacaaa gagagtcgtt ccttactggg taacacaact
    12001 tctgactggc cacctggtgg ctggtagcag taaaaattct gactatacct ggaggttttc
    12061 atggctgtcg ctgccaacaa acgttcggta atgacgctgt tttccggtcc tactgacatc
    12121 tatagccatc aggtccgcat tgtgctggct gagaaaggtg taagtttcga gatcgaacac
    12181 gtggaaaagg acaatccgcc tcaggatctg attgacctca acccgaatca gagcgttccg
    12241 accctggtgg atcgtgagct gaccctgtgg gaatctcgca tcattatgga atatctggat
    12301 gagcgtttcc cgcatccgcc actgatgcct gtttacccgg tagctcgcgg tgaaagccgt
    12361 ctgtacatgc atcgcatcga aaaagactgg tacacgctga tgaacaccat catcaacggt
    12421 tcagcttctg aagcagatgc cgcacgtaag caactgcgcg aagaactgct ggcgattgcg
    12481 ccggtcttcg gtcagaagcc gtacttcctg agcgatgagt tcagcctggt cgattgctat
    12541 cttgctccgc tgctgtggcg tctgccgcaa ctgggcatcg agttcagcgg cccgggtgcg
    12601 aaagagctga aaggctatat gacccgcgtc tttgagcgtg actctttcct tgcttcttta
    12661 actgaagcag aacgtgaaat gcgtctgggc cggagttaat ctgtatggat ttgtcacagc
    12721 taacaccacg tcgtccctat ctgctgcgtg cattctatga gtggttgctg gataaccagc
    12781 tcacgccgca cctggtggtg gatgtgacgc tccctggcgt gcaggttcct atggaatatg
    12841 cgcgtgacgg gcaaatcgta ctcaacattg cgccgcgtgc tgtcggcaat ctggaactgg
    12901 cgaatgatga ggtgcgcttt aacgcgcgct ttggcggcat tccgcgtcag gtttctgtgc
    12961 cgctggctgc cgtgctggct atctacgccc gtgaaaatgg cgcaggcaca atgtttgagc
    13021 ctgaagctgc ctacgatgaa gataccagca tcatgaatga tgaagaggca tcggcagaca
    13081 acgaaaccgt tatgtcggtt attgatggcg acaagccaga tcacgatgat gacactcatc
    13141 ctgacgatga acctccgcag ccaccacgcg gtggtcgacc ggcattacgc gttgtgaagt
    13201 aatacaaaaa caggccctgg tggcctgttt tgtcttttaa tggcttaata aaatagcgtg
    13261 attgtggcaa tcatattcac cacgaaaccg actgccatgg ggatcgctgt tcgcttcacc
    13321 accgcaaaag gcgaaacgcc tgcaattcct gacgtaacga ccaccaccgc agtaatcggc
    13381 gaaaccgcgc gcgctagcgt cgtggcaaaa tgcatcggca taatcattac aaccgctggt
    13441 acatgtagtc cagctgcgat attcggaata agactggcaa atgacataaa cggcgcattg
    13501 ccagagccca tcacaatggc acaaatggca atgaccagcg ccataataat catcacgcca
    13561 ataccgccca gaccagaatg ctccgcaccc ctgataaccg catcgacagt gccaatcgtc
    13621 gttaagcctt tcgcaaatat ttcacccgcg accaccagcg ttaccacgtt ggcaaactgc
    13681 gtacccatgc cgtcaaaaaa cgcctgcaca tcgtccattg tttcgcgcaa gttatgcttg
    13741 cggaagaact caacaaacat cgtcaccgtc aaactcagta acatcaccac caccagatgc
    13801 agttctgact gcatcagccc gacgtgggcg aggaacagcg agccgagcat caggattaac
    13861 ggcatcacag gtaaaatggc gtaatagagc ggcgggacat tatcgagagc tttttgctct
    13921 gcttgttcgt gattgatatt tttatctttt ttgtcaaaag cgcgttgcac gaaaaagtgg
    13981 gagatcgcca ccgagataat gacgcaagag gcgaccggaa gctggtagtg gaagaagtaa
    14041 gtggcaattt tcattcccgc gacctgggct gcaaaaatgg agttcgtttc cagaattccc
    14101 cactcaatgg acattgtggt tgcgataacc gccaccgcag agagacgact tactcccaga
    14161 ctcaccagtg tcggaaataa ggtgaccatc agcaacatac ccagaccgga ggcgctggta
    14221 ataaactgcg ccatgatttg accgatgacg taagttgccg acagaataat atacggtgag
    14281 cgaatgagtt ttaacgggcg gcttaacaag ctcaccatcg cgcgactggc ccctatgcgc
    14341 tccatgtagc gggcataccg cccaccgcca taatcgatag ccccaatccg gcaatgcggt
    14401 tggacagcat gcgcaggatt tcattataaa tatcgacgat caagtagccg ctgcttttgg
    14461 cgggctcgag tacaccaccg aaccctaacc agacaccgca catcatcagg aagatacctg
    14521 cggcagccag caccacctga ggtttgtagt ttttcaggat caaatagccc atcgtaatta
    14581 atacgatgac agatataatt atgccgaaca ttgttgaact ccgtgtcaaa agaaaacggt
    14641 caatcccata aacggcagat tgaaaacaat gatgttatat tttttgcaag tctatttatg
    14701 gtgcggatgt cgtgttttta attgtaggtg agataatttt tcattaaaaa atatgcgctt
    14761 atgattattt tgcaagaacg cattcataat attcataatg ctcgtgaata gtcttataaa
    14821 taattcaaac gggatgtttt tatctgcgtt acattaattt ttcgcaatag ttaattattc
    14881 cgttaattat ggtaatgatg aggcacaaag agaaaaacct gccattttcc cctactttca
    14941 atcctgtgat aggatgtcac tgatgatgtt aatcacactg accttacaga atgggcctta
    15001 tgaacgcatt tgattcgcaa accgaagatt cttcacctgc aattggtcgc aacttgcgta
    15061 gccgcccgct ggcgcgtaaa aaactctccg aaatggtgga agaagagctg gaacagatga
    15121 tccgccgtcg tgaatttggc gaaggtgaac aattaccgtc tgaacgcgaa ctgatggcgt
    15181 tctttaacgt cgggcgtcct tcggtgcgtg aagcgctggc agcgttaaaa cgcaaaggtc
    15241 tggtgcaaat aaacaacggc gaacgcgctc gcgtctcgcg tccttctgcg gacactatca
    15301 tcggtgagct ttccggcatg gcgaaagatt tcctttctca tcccggtggg attgcccatt
    15361 tcgaacaatt acgtctgttc tttgaatcca gtctggtgcg ctatgcggct gaacatgcca
    15421 ccgatgagca aatcgatttg ctggcaaaag cactggaaat caacagtcag tcgctggata
    15481 acaacgcggc attcattcgt tcagacgttg atttccaccg cgtgctggcg gagatccccg
    15541 gtaacccaat cttcatggcg atccacgttg ccctgctcga ctggcttatt gccgcacgcc
    15601 caacggttac cgatcaggca ctgcacgaac ataacaacgt tagttatcaa cagcatattg
    15661 cgatcgttga tgcgatccgc cgtcatgatc ctgacgaagc cgatcgtgcg ttgcaatcgc
    15721 atctcaacag cgtctctgct acctggcacg ctttcggtca gaccaccaac aaaaagaaat
    15781 aatgccactt tagtgaagca gatcgcatta taagctttct gtatggggtg ttgcttaatt
    15841 gatctggtat aacaggtata aaggtatatc gtttatcaga caagcatcac ttcagaggta
    15901 tttatggcaa cgaatttacg tggcgtaatg gctgcactcc tgactccttt tgaccaacaa
    15961 caagcactgg ataaagcgag tctgcgtcgc ctggttcagt tcaatattca gcagggcatc
    16021 gacggtttat acgtgggtgg ttcgaccggc gaggcctttg tacaaagcct ttccgagcgt
    16081 gaacaggtac tggaaatcgt cgccgaagag gcgaaaggta agattaaact catcgcccac
    16141 gtcggttgcg tcagcaccgc cgaaagccaa caacttgcgg catcggctaa acgttatggc
    16201 ttcgatgccg tctccgccgt cacgccgttc tactatcctt tcagctttga agaacactgc
    16261 gatcactatc gggcaattat tgattcggcg gatggtttgc cgatggtggt gtacaacatt
    16321 ccagccctga gtggggtaaa actgaccctg gatcagatca acacacttgt tacattgcct
    16381 ggcgtaggtg cgctgaaaca gacctctggc gatctctatc agatggagca gatccgtcgt
    16441 gaacatcctg atcttgtgct ctataacggt tacgacgaaa tcttcgcctc tggtctgctg
    16501 gcgggcgctg atggtggtat cggtagtacc tacaacatca tgggctggcg ctatcagggg
    16561 atcgttaagg cgctgaaaga aggcgatatc cagaccgcgc agaaactgca aactgaatgc
    16621 aataaagtca ttgatttact gatcaaaacg ggcgtattcc gcggcctgaa aactgtcctc
    16681 cattatatgg atgtcgtttc tgtgccgctg tgccgcaaac cgtttggacc ggtagatgaa
    16741 aaatatctgc cagaactgaa ggcgctggcc cagcagttga tgcaagagcg cgggtgagtt
    16801 gtttcccctc gctcgcccct accgggtgag gggaaataaa cgcatctgta ccctacaatt
    16861 tttataccaa agcgtgtggg catcgcccac cgcgggagac tcacaatgag tactacaacc
    16921 cagaatatcc cgtggtatcg ccatctcaac cgtgcacaat ggcgcgcatt ttccgctgcc
    16981 tggttgggat atctgcttga cggttttgat ttcgttttaa tcgccctggt actcaccgaa
    17041 gtacagggtg aattcgggct gacgacggtg caggcggcaa gtctgatctc cgcagccttt
    17101 atctctcgct ggttcggcgg cctgatgctc ggcgctatgg gtgaccgcta cgggcgtcgt
    17161 ctggcaatgg tcaccagcat cgttctcttc tcggccggga cgctggcctg cggctttgcg
    17221 ccaggctaca tcaccatgtt tatcgcgcgt ctggtcatcg gcatggggat ggcgggtgaa
    17281 tacggttcca gcgccaccta tgtcattgaa agctggccaa aacatctgcg taacaaagcc
    17341 agtggttttc tgatttcagg cttctctgtg ggggccgtcg ttgccgctca ggtctatagc
    17401 ctggtggttc cggtctgggg ctggcgtgcg ctgttcttta tcggcatttt gcctatcatc
    17461 tttgctctct ggctgcgtaa aaacatcccg gaagcggaag actggaaaga gaagcatgca
    17521 ggtaaagcac cagtacgcac gatggtagat attctctacc gtggtgaaca tcgcattgcc
    17581 aatatcgtaa tgacactggc ggcggctact gcgctgtggt tttgcttcgc cggtaacctg
    17641 caaaatgccg cgatcgtcgc tgttcttggg ctgttatgcg ccgcaatctt tatcagcttt
    17701 atggtgcaaa gtacgggtaa acgctggcca acgggcgtaa tgctgatggt ggtcgtgttg
    17761 tttgctttcc tctactcatg gccgattcag gcgctgctgc caacgtatct gaaaaccgat
    17821 ctggcttata acccgcatac tgtcgccaat gtgctgttct ttagcggctt tggggctgcg
    17881 gtggggtgct gtgtcagcgg cttcctcggt gactggctgg gaacccgcaa agcctacgtt
    17941 tgtagcctgt tggcctcgca gctgttgatt attccggtat ttgcgattgg cggcgcaaac
    18001 gtctgggtgc tcggtctgtt actgttcttc cagcaaatgc ttggacaagg gatcgccggg
    18061 atcttaccga aactgattgg cggttatttc gataccgacc agcgtgcagc gggcctgggc
    18121 tttacctaca acgttggcgc attgggcggc gcactggccc caatcatcgg cgcgttgatc
    18181 gctcaacgtc tggatctggg tactgcgctg gcatcgctat cgttcagtct gacatttgtg
    18241 gtgatcctgc tgattggtct ggatatgcct tcccgcgttc agcgttggct gcgcccggaa
    18301 gcattgcgta ctcatgacgc tatcgacggc aaaccattta gcggtgccgt gccatttggc
    18361 agcgccaaaa acgatttagt caaaaccaaa agttaatcct gttgcccggt ctctgtaccg
    18421 ggcctttcgc taagggaaga tgtatgtcgt tacttgcaca actggatcaa aaaatcgctg
    18481 ctaacggtgg cctgattgtc tcctgccagc cggttccgga cagcccgctc gataaacccg
    18541 aaatcgtcgc tgccatggca ttagcggcag aacaggcggg cgcggttgcc attcgcattg
    18601 aaggtgtggc aaatctgcaa gccacgcgtg cggtggtgag cgtgccgatt attggaattg
    18661 tgaaacgcga tctggaggat tctccggtac gcatcacggc ctatattgaa gatgttgatg
    18721 cgctggcgca ggcgggcgcg gacattatcg ccattgacgg caccgaccgc ccgcgtccgg
    18781 tgcctgttga aacgctgctg gcacgtattc accatcacgg tttactggcg atgaccgact
    18841 gctcaacgcc ggaagacggc ctggcatgcc aaaagctggg agccgaaatt attggcacta
    18901 cgctttctgg ctataccacg cctgaaacgc cagaagagcc ggatctggcg ctggtgaaaa
    18961 cgttgagcga cgccggatgt cgggtgattg ccgaagggcg ttacaacacg cctgctcagg
    19021 cggcagatgc gatgcgccac ggcgcgtggg cggtgacggt cggttctgcc attacgcgtc
    19081 ttgaacacat ttgtcagtgg tacaacacag cgatgaaaaa ggcggtgcta tgaccacgtt
    19141 ggcgattgat atcggcggta ctaaacttgc cgccgcgctg attggcgctg acgggcagat
    19201 ccgcgatcgc cgagaacttc cgacaccagc cagccagact ccgcaggcgt tgcgtgatgc
    19261 cttagccgcg ttagtcgccc cgttgcaagc tcatgcgcag caggttgcca tcgcttcaac
    19321 cggaattatt cgcgacggca gcttgctggc gctgaatccg cataatcttg gtggattgct
    19381 acactttccg ttagtcaaaa cgctggaaca actttccaat ttgccgacca ttgccattaa
    19441 cgacgcgcag gccgcagcat gggcagagta tcaggcgctg gaaggcgata taaccgatat
    19501 ggtgtttatc accgtttcca ctggcgtcgg cggcggtgta gtgagcggcg gtaaactgct
    19561 taccggccct ggcggtctgg cggggcacat cgggcatacg cttgccgatc cacacggccc
    19621 agtctgcggc tgtggacgca caggttgcgt ggaagcgatt gcttctggtc gcggtattgc
    19681 agcggcagcg caaggtgaac tcatgggcgc ggatgcgaga actattttca cacgcgccgg
    19741 gcagggcgac gagcaggcgc agcaactgat tcaccgctcc gcacatgtgc tggcaaggct
    19801 gatcgctgat attaaagcca caactgattg ccagtgcgtg gtggtcggtg gcagcgttgg
    19861 tctggcagaa gggtatctgg cgttggtgga aacgtatctg gcgcaggagc cagcggcatt
    19921 tcatgttgat ttactggcgg cgcactaccg ccacgatgca ggtttacttg gggctgcgct
    19981 gttggcccag ggagaaaaat tatgatgatg ggtgaagtac agtcattacc gtctgctggg
    20041 ttacatcctg cgttacagga cgcgttaacg ctggcattag ctgccagacc gcaagaaaaa
    20101 gcgcctggtc gttacgaatt acagggcgac aatatcttta tgaatgtcat gacgtttaac
    20161 actcaatcgc ccgtcgagaa aaaagcggaa ttgcacgagc aatacattga tatccagctg
    20221 ttattaaacg gtgaggaacg gattctgttt ggcatggcag gcactgcgcg ccagtgtgaa
    20281 gagttccacc atgaggatga ttatcagctt tgcagcacca ttgataacga gcaagccatc
    20341 atcttaaaac cgggaatgtt cgccgtgttt atgccaagtg aaccgcataa accaggatgc
    20401 gttgtcggcg agccgggtga gattaaaaag gtggtggtga aggttaaggc tgatttaatg
    20461 gcttaaattt attagatcag gtgtgacctg acccatcttt ggcacagagc caaacctgaa
    20521 ctgacggacc gctctgtgcc attacctgac gttgtattct tt
//
LOCUS       DAJVUK010000066        20474 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.066, whole genome shotgun sequence.
ACCESSION   DAJVUK010000066 DAJVUK010000000
VERSION     DAJVUK010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20474
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.066"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..4287)
                     /gene="mukB"
                     /locus_tag="OQQ57_002213"
     CDS             complement(<1..4287)
                     /gene="mukB"
                     /locus_tag="OQQ57_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HCS1956968.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLDGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVVFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKELLNDLQRELQDIGVCADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAAYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLVISSRSVANIIRKTIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQ"
     gene            complement(4287..4991)
                     /gene="mukE"
                     /locus_tag="OQQ57_002214"
     CDS             complement(4287..4991)
                     /gene="mukE"
                     /locus_tag="OQQ57_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HCS1956969.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEENQPDSGEEE"
     gene            complement(4972..6294)
                     /gene="mukF"
                     /locus_tag="OQQ57_002215"
     CDS             complement(4972..6294)
                     /gene="mukF"
                     /locus_tag="OQQ57_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HCS1956970.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLQVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(6291..7076)
                     /gene="cmoM"
                     /locus_tag="OQQ57_002216"
     CDS             complement(6291..7076)
                     /gene="cmoM"
                     /locus_tag="OQQ57_002216"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HCS1956971.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            7212..7991
                     /gene="elyC"
                     /locus_tag="OQQ57_002217"
     CDS             7212..7991
                     /gene="elyC"
                     /locus_tag="OQQ57_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HCS1956972.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTAKIFIS
                     IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
     gene            complement(7968..8861)
                     /locus_tag="OQQ57_002218"
     CDS             complement(7968..8861)
                     /locus_tag="OQQ57_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HCS1956973.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIYGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRRNFDLASKSLLPWLA"
     gene            complement(9015..9761)
                     /gene="kdsB"
                     /locus_tag="OQQ57_002219"
     CDS             complement(9015..9761)
                     /gene="kdsB"
                     /locus_tag="OQQ57_002219"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HCS1956974.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            complement(9758..9940)
                     /gene="ycaR"
                     /locus_tag="OQQ57_002220"
     CDS             complement(9758..9940)
                     /gene="ycaR"
                     /locus_tag="OQQ57_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HCS1956975.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            complement(9992..11224)
                     /locus_tag="OQQ57_002221"
     CDS             complement(9992..11224)
                     /locus_tag="OQQ57_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaQ family DNA glycosylase"
                     /protein_id="HCS1956976.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
                     PQGLFTDCRTGWEIDPVA"
     gene            complement(11261..12247)
                     /gene="lpxK"
                     /locus_tag="OQQ57_002222"
     CDS             complement(11261..12247)
                     /gene="lpxK"
                     /locus_tag="OQQ57_002222"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HCS1956977.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGSKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     SAEQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
     gene            complement(12244..13992)
                     /gene="msbA"
                     /locus_tag="OQQ57_002223"
     CDS             complement(12244..13992)
                     /gene="msbA"
                     /locus_tag="OQQ57_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HCS1956978.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            complement(14029..16301)
                     /locus_tag="OQQ57_002224"
                     /pseudo
     CDS             complement(14029..16301)
                     /locus_tag="OQQ57_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309023.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
     gene            complement(16508..16792)
                     /gene="ihfB"
                     /locus_tag="OQQ57_002225"
     CDS             complement(16508..16792)
                     /gene="ihfB"
                     /locus_tag="OQQ57_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HCS1956979.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            complement(16952..18625)
                     /gene="rpsA"
                     /locus_tag="OQQ57_002226"
     CDS             complement(16952..18625)
                     /gene="rpsA"
                     /locus_tag="OQQ57_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HCS1956980.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            complement(18736..19419)
                     /gene="cmk"
                     /locus_tag="OQQ57_002227"
     CDS             complement(18736..19419)
                     /gene="cmk"
                     /locus_tag="OQQ57_002227"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HCS1956981.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VATFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            complement(19592..20355)
                     /gene="ycaL"
                     /locus_tag="OQQ57_002228"
                     /pseudo
     CDS             complement(19592..20355)
                     /gene="ycaL"
                     /locus_tag="OQQ57_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase YcaL"
BASE COUNT         4934 a         5669 c         4964 g         4907 t
ORIGIN      
        1 ctgcatttgc aaacgctcac acaattcaaa cagcgtggcg atagaacgag catccagtcg
       61 cgctgcttca tcgaggaaca gcagacggca aggagagata tctttaccgc gcaggcggcg
      121 agattcatct tcccagcttt gtaccaccat caccagaatc gacataccgg taccaatcgc
      181 ctcaccggtc gacaatgcac cagactctgc gcgcaaccaa ccatcggaac cacggttaac
      241 ctcaacttcc atttccagat agttgcggta atccagcagt tcttcgccaa tggtctgcgg
      301 cgtgcgctgc cccatatcaa tctgcggatt aagacgctga tacaatttcg ccaacgcttc
      361 cgagaaggtc agacggttgc tgttaaacag atcctgatgc tgctcgtgct gttcagagag
      421 cacatccagc agcatggcgt gcgtttcacg cacgttcacg ttgaggcgca cgctgttcac
      481 ctgaccaaac gatacgttct gcaacccctg gttgagcata cggatacggt tctgctcgcg
      541 ctgaatggtt ttgcgaatga tgttcgccac gctgcgggaa ctgatcacca gtttctgttc
      601 acgggaggtt aattcttcgg tcagacggct aagttcgatc tccatctgtt cgatagcttc
      661 caccggatca tcggtacgaa taatatcctg acgaatacgt tcacgcagat gctgataagc
      721 cgccacgaag aactgaattt tacgctccgg acgtttcgga tcttccgaca tgcgcagcac
      781 gtcgcgcaga tgttcgttat ccgccaccgc cagacgcagc gcacccaatg ccttatccga
      841 catagagcgc aaatcatcag cggagagata agccagctca cgacggtgta agcggcgctc
      901 aacgccgtta tctttcacca tgcgcatcac cgcacaccag cccgctttgg cggtcactac
      961 ctgctcgcgc atctcaaagt aatcccgctc cagcttgcgc agtttgcggg tcaggttgtc
     1021 catctccgct tcgcagaagg taagcgcttt ttccagttga ttgcggcgtg aacggttatt
     1081 gctcagttgc gcatgcagct cgtcacggcg aatacgcgcc cgctcttctg ccccgctatc
     1141 agcacacacg ccgatatcct gcaattcacg ttgcagatcg ttgagtagct cttttttggt
     1201 gtcgtaagaa cttttcagcg aagccagcac ctggttgtac tgactcaact gcgctgcgtg
     1261 accgcgcaac gcttcgcgag cgcgggtacg ctccgcttcc gcctgttcca gacgttcacg
     1321 cagtttttcg ttgagatcgc tgttaccgct aagcatttct gccgagtcag agtagctaaa
     1381 gtgcgcacga cgctgcacca cttccgtcag ggcaaacgcc tgctgacggg catcgcgctg
     1441 catctgttga gagtacgcgt aatcttcttt taactgttcg aactgttccg ggtcgctctg
     1501 caataccgaa acgatcggtt ccagtttcgc cagttgattg ccaaactgct gaacaaaacg
     1561 cgcggcttcc tgggcttcat ccagacgttc gcggatttca tcgacgcgat ccgccaggct
     1621 atcatcagcc aacaggttga gacgcggcag aatgcggttc agcgccgtaa cgccctcttt
     1681 cgcctgctca aactgaatac gctgctgctg gttatcattt tcatgattac ttaacgcccg
     1741 ctccagttcg acgcgacggc tgttcagttg acggatttct gcttccgggt cagactcaaa
     1801 cacaaccgcc agatgactgc cgataaagcg gctgaacgcc tgatgcagac gctgagtttt
     1861 ctgtacatca aaggagagcg tggcgaagcg ttcggaaagc acttcacgct cggcatggag
     1921 gctttcaata cggctttcac gcgcagcacg accaaacagc ggcacttccg ggaaacgtga
     1981 ataacgccac tgacgatcgg cgattttcac cactaccgct ttttccagct catcaacgct
     2041 gaacacgctg tcatcgaatg actgcggatc tccttcgatc agatagagat cttccgggca
     2101 atcggtcaag ccatctaggt gttcagttac ctgtgacaga tctggcacca cgatggcgtg
     2161 gcgtgacggg ccatacagcg ctgagaagta cggcgcatct tccaggctaa cgtcgtcata
     2221 aatttctgac agcagcacac caccaaaacg ctccgccagc gcgttcagac gctgatcttc
     2281 agagccgcca ggctggctta aacgttcgat ctcttcatcg acggcgtttt tgcgcgcgcc
     2341 cacttcatcg cgttcaacaa tcgcctctcg ctcacgctcc agcaactgtt gcagatattc
     2401 ggtgacgtcc tggctggagg taaactcttc gccgcactgt tcgctcaact ggttgagact
     2461 gttttgcgct gccagccaaa ccggcgcacg ctgcatcaaa ctctgaatgc gagactgcag
     2521 ctgttcctgc tcctggcgca gtgccatgcg ctcttcacgg gcgttagaca cgctatcgga
     2581 aagagaggca atgcgtgctt ccagttcctg atgcagggct tccagttcgt cgatatcaaa
     2641 attcttgccc tgacgtttgc agaaatctgc cagcagacgc tcagcttctt gctgctcgcg
     2701 tagacgctgt tccagttcgc ttaatcgcat ccgcagcggc tgaacctgct ctgccaggtg
     2761 acgctgatcg accccttcgc gcaatagttc gcgagcgaca tcccacgcct cgttacgcgc
     2821 cagtgggccg ttgattgcca ccaccagctg ataagcctgc tcaaactggc tgtgcgcggt
     2881 ttgcgccatg ctcattttct gctcaagaga gagcattttt tcagtcgctt ccagctcttt
     2941 cgcctggaag gtttccagcc attcggcggc gctgtcggcg gttaagtccg gcagatggca
     3001 cagttctttg gcacgattaa gcgcagcaat cgcctggtta tactggatcg cgcgcgtttg
     3061 ctggacgtcc agcgcctgct ggtagtcagc aagctggctt ttcagctcgt ccacttccag
     3121 ttcggcagct tccgcgcgag cctcgttctc ttcctggcgt tcgatggctt ctgccaccac
     3181 ttcgttttgc tcttccagac ggatctgcag ctcatcgaga tccgcttcgt agcgttcgat
     3241 cttctcctgc tgacgcagtg cggtttgcac caggttcagg tgatcgctgg ccgcctgata
     3301 atccgcttcc agatcgcctt cggcaccgtt gtgctctgcc agctcacgcg ccatatcgac
     3361 gtgtttgtac tgctcagccg ccagttgctg acgcgaagta tgtaactcgc gacgaaactc
     3421 cagggctttg tcgagatgga cacggcgctc gttggcgtga cgcatgtagt ccgccgccac
     3481 gtagttggta gcttcgctga tcagatgctt aaacaggtca cggtccgact gggtgacacg
     3541 aatcgcttcc agcgtcatgc ggttttcacg cagcgccgct tccatgtcct ggaacgcttt
     3601 acgcacgccg ctgttttccg gcaacagata gtcgcgcaga gaacgggtaa tggcactgga
     3661 gatcccgcca tacagcgaag cttcgatcag acgatagaat ttgctacggt cagatgcgga
     3721 gcgcagacga cgcgcgatga tgcccagatc gaacatcagc gagtggtaat cggtaatgga
     3781 gttgaactgt ttaaactgca cgccttccat cgcctcgagc ttgtctttca gctcgttaag
     3841 cggcagcacg cgcgcctggc gttcgttcag ggtttcggtc accagctgtg tcggctgcac
     3901 cgacatcggc agtccctgaa tggcaaatgg tttgatatcc actttacgat cgcgtccggc
     3961 aacctgttgc agacgcacac cgaccaccac gcgctggtgg cgcgagttaa tggtgtcgag
     4021 catcgaataa cagacacccg ctttcagctt accgtgcaga cctttatcgc gcgaaccgct
     4081 ggtggccccg gcttccgtag tgttacggaa atgcagcagg gtcaggtcgg ggatcagcgc
     4141 cgtaacgaac gccgccatgg tggtggattt acccgccccg ttaccgccag aaagcgtcgt
     4201 gaccagctcg tcaaggtcaa aagttcgggc aaaaaagccg ttccagttaa tcagcgtcag
     4261 tgagcgaaat ttaccgcgtt caatcattat tcttcctctc cgctatctgg ctgattctct
     4321 tcggtttcat cgttgagttg cagatgattt tcaatcggca ttgcttcgcc atcacgaatc
     4381 aggcgacgct gtgcttcacg gggatcgtcg ccagcacgca catcggctcc gaagcggaac
     4441 accgattcgg taatgcgaaa cttgctgctg tcgtggccca taaaccacac catgcctaaa
     4501 cgacgcagac ggttgagcga agaacgtact ttctcctgca acttctgacg gtcaacgtct
     4561 gaaccggttg aacggttgtt caccagtttc agcagttttg cttcatcggc cagggtgagc
     4621 agttcgtcgt acagttcctg ctgggtgaaa atcccctcat tcgccagccg ttccgggctg
     4681 agatagagat aacagaggat tttcccgacc atcatatcca gttccgacaa gacggaacgc
     4741 gggataagag tggtggaacg tgggcgtaaa tagaagaacc cttccggtgc gcgaataagc
     4801 tcaacgttat aacgcgcgta aaactcttcc agatattcct gaaaatccat caggaatgca
     4861 tgattatcca gttcgtcgag gccaatatgg cggcctgaac gtaaggcgct gtccagcgcc
     4921 ggaaataacg gattcgccag cgcctgcgcc agcttaaccg gcatcacttg ttcaatattt
     4981 gtcgatgaca tgcgcctgta ccttggctcc gtaatcatta atcggctgcc atttcgctgg
     5041 cagtccggtg aaatctgctt gcgctacgcc aagacgtacc gcctgatcaa taacaatacg
     5101 cgcaacgtca aagtgacgtg cacgcggata ctgtgacaga tattcgcgta ccaccagacc
     5161 aagatccagc ggcacttgtc tggttttgta cacggcaagt tgttcttcga tgatcgccgc
     5221 cagctgttcg cggatctcgt taaactcttc gtattccaga tcctcaggaa gttccccagt
     5281 cacttcttca tcgcgcagtg ccatctcttc gtcacgcata tccagcagac gatcggcatt
     5341 ggcataagtt agcgcccacg gctcatcaaa ataggtttgt accgactgac gtaaccgctg
     5401 agcaaagacg cggtttttat ccatatcgat cgcggtacga ataaatttgt gtacgtggcg
     5461 gtcgtagcca atccacaagt cgatggattg ctggccccaa ctgataatac gatcgagttt
     5521 gctctgcaga tcgaacacca gacgatcgac gaaatgcaga tcgtcatggg tcatcgtcgc
     5581 atcctgaatg cgcaacagat tagcctgcaa tttgtcgcct gccgcttcca gcgtatcctg
     5641 caattcacgc agcgttccgg aagtttccga aagcaacaat tcacagctgg aaatcgccgc
     5701 ccgccagtct ttgttcagca actgggcgat atcgtccttc acctgctgct gctgttcgtc
     5761 catcagacgt tgcgtcaggt cgatactgtc gaaaatttct gctaccgaat atttcagtgg
     5821 cgcatagaca ttacggtgcc agtgaaattc atcaccgccc tcttcggcgg catctgctgc
     5881 gcgtttgagc tcacccgcca caatcgacaa ctgcatagaa agacgcagcg tagaaaactc
     5941 gcgctgacgg atgtagtagt cagtaatgcc gatgccgagc ggcgtcagac ggtaaattgc
     6001 gttcccttcc gcctgctcgc tggtaaagcg gttcagcaga cgttgacgca ccatgtcgtt
     6061 gatcgcgtta ttggcgcgca cgccgatggt ttcgctggtt tgctcaaacg catcactcac
     6121 atggcggaat gcatccacca gctcgccttc actcatctca ccatccagac gctcgccgtt
     6181 cagcgtggca accgccagca gaaaagagag tcggtctacc tgcagcgaga tggagaagtc
     6241 attttttctg gcccaggcaa ccagttcggg gactgtctgg gaaaattcac tcatacttta
     6301 tccttgctct gcggtttgcg cgcggtgaca tgaatataac gccccagggt aatatacggt
     6361 tcctgacggc aataacgcgt ttctaattca agtaatgctt catagcagtc gcgctgctgg
     6421 tgcttctcgc gcagataatc atgaaacacg cgaacgcctg tcttacccat aatttgccaa
     6481 ccagcttctt ccagccacag ataaacctgc gccgggtcgc gtggataatc tggcgaaagc
     6541 gtccgttttt tctttttcgg cattcccgcc tgcacgtaat caaaattccc ggcgaccatg
     6601 ttatgcatca acaaaccatg cgcattgtag aacattaacg acaacacgcc gcctggacgc
     6661 aacactgacc acagggtctg caatacactg cggggatcgg ccacccactc gagcaccgca
     6721 tggaacaata tcagatcaac gggcgtttcc aaatgcgaag caacatcctg agcggcgcaa
     6781 tgtataaatt gcatgttgtc gctcacacct tttgcttctg ccgcctgttt tgcgcggtcg
     6841 atcatctgcg cagaaagatc gcataaaatg acctgatgcc cacgctcggc cattttgatt
     6901 gcggtctgcc cttctccacc gccagcatcc agcacacgca gtttttgcgg gcccatttcc
     6961 gccagcacgc gatcgagatc ctgccacaga atagcctgtc gaagctgccc tttggtggtg
     7021 ccgtaaatgt tacgggaaaa cttttccgca atatcatcaa aattgcgatc ctgcattgct
     7081 ttctccaccg gttggctaag acgttttctg ataaagacgc tattttgtca cagccacggc
     7141 gagaatgaac ccgtctggtg taatatcgct ggcgatccct tgctatatgg ttaaaaaagg
     7201 aaccagaaag gatgcttttt acactgaaaa aagtgattgg caatatgttg ctgccacttc
     7261 cgctgatgtt gttaattatt ggcgctggcc tggcgctgct gtggtttagc cgttttcaaa
     7321 aaaccgcgaa gatttttatt agcattgggt ggctggcact cttgttattg agtttgcaac
     7381 cggtagccga ccgcctgctg cgtcccatcg aaagcaccta tccgacatgg aataattcgc
     7441 aaaaagtgga ctatatcgtg gtgctcggag gtggttatac ctggaacccg cagtgggcac
     7501 cgagctctaa tttaatcaat aacagtctgc cacgcctgaa tgaaggtatt cgcttatggc
     7561 gcgaaaatcc gggatcaaaa ctgatcttca cgggaggcgt agcaaaaacc aatacggtga
     7621 gtacagcgga agtaggtgcc agagttgcgc aatcgctggg cgtgccgcgc gagcaaatta
     7681 tcaccctgga tttgccaaaa gataccgaag aagaagctgc ggcagtgaaa caggcgattg
     7741 gtgacgcccc tttcctgctg gtgacctccg catcacatct gccgcgggcg atgatctttt
     7801 ttcagcagga agggttaaat cctctaccag ccccggcgaa tcagttggcc atcgactcgc
     7861 cgcttaatcc gtgggaacgg gcaatccctt ctccggtctg gctgatgcat agcgatcgtg
     7921 ttggctatga aacgcttggc cgcatctggc agtggctgaa aggtccgtca ggcgagccac
     7981 ggcaagagtg attttgatgc cagatcgaag ttgcgccgac taaatcgtcc ggtattaacc
     8041 agttgcgcaa cttcatccca taacacatac aaccaacgcc gccagatgaa cgactccgcc
     8101 actggcgcgc gttgcaggta actccagagc aaatcttccg ccagagaatt atccattagt
     8161 cggaacagtt cgtattctcg cggtgcccaa agcattagtc ccggcccgac catcgccagt
     8221 aactgatcgc tgcgcgaatc tttcagcatg ctgcgtaaac agaagttacc gtaaatcaac
     8281 acacaattgt cgttaaagcc ttcaaataat gccgggagac attcgcgagt gcgaaacagg
     8341 atccgcttat cctgcatcgt cagaccggtg ttattgaact gattgagcgt ggtccatagc
     8401 acttcaacat gttgccggta ccatgagggc cagaaatttt cctgagtatt gtcgaccgcg
     8461 ccgacgcaac cgcgactgtc ctgacggtgc catgccagta aggcttcaac gatttggtct
     8521 ttgagctgtt cccagcgttc tggtgttcgg gctggtgcct ccaccgaaac accacgcatc
     8581 cgctccagta gcaggacatc agggccgggg tgttcttcat gcgtcatcac accataaata
     8641 gtcggcatac ggacagtccc acttcttgcc agcatggtgg ttttccatgc cagttgtcgg
     8701 gcttttccgg gcgtactaaa gcttcttgcc attaacggca ttgggtttcc ctggctgtca
     8761 tacaaagccc acaacgccgt atccgctttt tcattgacgc actcaatacg actgagtttt
     8821 tcgcccagta aatggcttaa ttcggcacgc agctgttcca ttcagattac cctcataaaa
     8881 gctactgctt tcataatgag cgccaatata aaagatgtca cctgaatgag atcaattgtt
     8941 gaaaagaaaa attgaggaaa atcgtaacgg tacgacactc ctcccaaaat tggctgaagt
     9001 gtcgtgaagt gaaattagcg catttcagcg cgaacgcgct caagatcttc aggggtatcc
     9061 acacctgtgc caggaacttc ctgagcaaca gcaacatgga ttttttcgcc gtaccacaga
     9121 acacgaagct gctctaacat ttcgatgtgt tctaacggac ttgcctgcca gttgacgtaa
     9181 cgacggataa agcctgcacg gtagccataa atgccaagat gacgcaggaa gttatcgcca
     9241 acggtttcaa ggccttctgc aaaacgatca cgatcccaag gaatggtggc gcgtgagaag
     9301 tacagtgcat acccttcagc gtcgagaacc actttcaccg cattcgggtt aaacgcttct
     9361 tccgcattgt ggattggcac cgccagagtc gccataccca cctgacgctg agcgaggtta
     9421 tcagcaacct gacgaatgat tgtcgcaggg atcatcggtt catcaccctg cacattaacg
     9481 atcaccgtgt cgtcgctgaa tgcgcatttt tcgacaactt ccgccagacg ttctgttcct
     9541 gactgatgat cggcgcgcgt catacatact tcaccgccag cggcttcaac ggcgcgggca
     9601 acatcctcat gatcggttgc cacgatgatg cgctcggcac ctgattcacg cgcgcgttca
     9661 agaacatgaa caatcatggg tttgccgtta atatcaacca atggtttacc gggcagacgc
     9721 gtggacgcgt agcgcgcggg aataatgacc acaaaactca tgatttactc tcatcagcag
     9781 tcagcacgcg ggcttccgtt tccagcaaca ctggaatgcc atcgcggagc gggaaagcca
     9841 ggttatccag tttgcaaata agctcttgtt tttcctggtt ataccaaagt tttccgttgc
     9901 aaaccgggca ggcaatgatt tcaagcaaac gatgatccat agttcctcca gatggatcgg
     9961 gttatgaatg cataaatctt atcataatca tttatgcgac ggggtctatt tcccagccag
    10021 tgcggcaatc agtaaagaga ccttgcgggc agcgtcctaa tgtcacccgc gttgcctgct
    10081 gccagctcgc gaaatcagta atcgcctgac gtaacccttt ttgcagcatt gtcgttggtt
    10141 taatgccttc ctgtaaccac agagagataa cttcaaggat gcctgtctgg cgatgcattt
    10201 tggcatccat tcgcccaact aattgcccac gatgtaataa tggcagaaca aaatagccat
    10261 actggcgttt cggcgctggg gtatagcact ccagccggta gctaaaatca aaaagctgct
    10321 ctgcgcgttt gcgatcccag acaacaggat caaaaggcga aagtaccgcg ctgtgcgttg
    10381 cagtgagctt tccggccagc gcacgctcga gtagcggcag caaatcagca tgcagccaaa
    10441 gattgcccaa tttttcaaca tgcacagcaa tgatttgctg ctgttcagcc ctcgcttcgc
    10501 gccacgccgc cagtgccgga cgtttcagcc gatagtaatc tgccagccac tgttcgcgga
    10561 atattcccag gctacgcgca ctgttatcca gcatgatgat ttctgcttct gtttgcgaaa
    10621 cgagatcgcg ctcatcatcc cagtcaggca tgacacggtg ggttaaatca taaacgcgct
    10681 ggaagttgcg ccgttcaatc accatcacct ttccggcagt aaataaacct tccagatgcc
    10741 gtttatgcgg tttccattcc caccagccgc ttgcaccttt acgaggatgc tcaaaatcgg
    10801 ctgaacgtac cggcccctta tcatgaatat gctgaattaa ctgtgcaatt tccgcctcat
    10861 gttcctgcat ccaggcgtct ttgtatttcc agcccatttt ttcaggtgcc agcatgcggt
    10921 ggcgaataag acgaaagtcg ctacgcggca taaagcaggc ttcatgcgcc cagtattcca
    10981 ttaattcgcc acgcgccaga gactcatcca gccactgggc aggataattt cccagacgac
    11041 tgaaaagcac cagatatgga ctacgggcaa caatattgat ggtatcgatt tgcagcaagg
    11101 acatgcggga gatcgttgcc ggaatatcct ccaacgacgc tcgacggcgg ggtttgttta
    11161 acaggccttg tgcggcaagg tgaagattac gcgcatcagc aagggagagg tgcggcagcg
    11221 acattcatga ctccatcaat cgaacgctgc cgcggcgtaa ctagttgcca gaagccagcg
    11281 aggttagttg cgtaagcagt ttcgctggtt catcacctga aagctgtgcg tctacaggca
    11341 aataccacca attttcttct gcaaaggccc ggcatttcac cgcatctttt tcagtcatta
    11401 ccagcgtttg ctcggcgctt accaacgcac tgacatccgc atggttcaaa gactgatgat
    11461 cggccagcgg tacacatttt tccggttgta cgccacacat cttcagcgtg gcaaaaaagc
    11521 gcggcggatg cccaatcccc gccatcgcca ctacatgttc aagctgagca acgtcacaac
    11581 gcgtaccggt acgtaaattc accgcctgac ccggcagcag atgcatggga atttcaccgc
    11641 tgcgagggac accgccgttg acgattaccg catcaaccga ctttaagcgc cccgctcgct
    11701 cacgcattgg ccccgccggc aaccaccagc cattgccaaa gcgacgcaca ccatcaataa
    11761 cgacaatttc cacatcacgc gccagacggt aatgctgtaa accgtcgtcg gttacgatga
    11821 tctgcacatc agggtgttgc gccagaatgg cttttaccgc atcagaacga acgggagaaa
    11881 ccgcaacagg cgcatcagtg cgttgataaa tcaacacagg ttcatcaccc gcctgtgctg
    11941 ttgtggtatc tgccgacaat aacagcggat aagattcagc cttactacca tatccccgcg
    12001 atacgacccc cacgcgaata ccgcgctgtt gcaactgttc caccagccag acaacgaccg
    12061 gggtttttcc gttgccgcct gcggtgagat taccaaccac gacaaccggt acgggggcac
    12121 gccaggcgcg cttcagtttt agtttatagc aaagacggat cgcgccactc accaggccat
    12181 acaaccagga gagtggcagc aatagccgcc acaaagggga ttcaccagac cagatttttt
    12241 cgatcattgg ccaaactgca ttttgtgaag ttgcgcgtaa acgccgcggt gctcaagcaa
    12301 atcgttatgc gtaccgcgtt ccacaatgac accatcctcg acgaccacga tttcgtctgc
    12361 cttttcaatg gtagacaagc ggtgggcaat caccagagag gtacggtttt tctgcaactc
    12421 atccagtgcc gcctgaatcg cacgttcgga ttcggtatcc agagccgagg tagcttcatc
    12481 cagaatcaga atcgggctat cacgcagcaa ggctcgagcg atagcaatac gctgacgctg
    12541 accgccagag agcagcacgc cgttttcacc aatcactgta tcgagaccgt tatccatctt
    12601 attgatgaag tccatggcgt aggccatacg cgccgcttct tcaatttgct cacggctgta
    12661 ctgttcagtc cgtgcgtaag caatgttgtt agcaaccgta tcgttaaaca gatggacatt
    12721 ctgcgacacc agagcaacct ggttacgtaa cgacgccagg gtatactcgc gcagatcgtg
    12781 accatccatc aggatttcgc cttcatcaat atcgtaaaaa cgagtgatca ggctggcgat
    12841 ggttgattta cctgaaccag agcgtccaac cagagcaacc gtcttccctg ccggaatttt
    12901 caggttgatg ttacgcaatg caggtacgtc acgtcccgga taagtaaagg tgacattgcg
    12961 gaattccacg tcgccagtcg cacgctcgat cacgcgctta ccttcgtctt tctcctgctc
    13021 actgtccaga atggtaaaca gcgtctgaca agccgccata ccgcgctgga actgggcgtt
    13081 aacgttggtc agtgatttca gcggacgcat cagtgcaatc attgaagaga aaacaacggt
    13141 aatcgtacca gcagtcaggc tatccatgac acttgggaag ctcgccgcat acagaacaaa
    13201 cgccagcgcc aaagaggcga tcagctgaat gatcggatca gagatggaag aggctgaaac
    13261 cattttcatc ccctgaagac gcattcggtt gctgacttta tcaaagcgtt tcgtttccac
    13321 ttcctgacca ccgaaaatca atacttcttt gtggcccttc agcatttgtt cggcgctggt
    13381 ggtcacctgc cccatggtgt tctgcatgtt tttactgatg ttgcgaaaac gcttcgatac
    13441 tacgcgaatc gcaatcgaaa caatcggtgc cagcacaatc aaaatgatcg acagttgcca
    13501 actgtaatag aacatcatga tgaacaggcc gatgattgac gcaccttcac gcacaaccgt
    13561 tatcagtgcg ccggaagaag aagaagcaac ctgttcggaa tcgtaggtaa tacgtgacaa
    13621 cagcgtcccc gttgactgtt tgtcaaaaaa tgaaaccggc attcccatca tgtgaccaaa
    13681 caggcggcga cgcatggtca ttaccacctt tcctgatacc caggagatac agtagctgga
    13741 gacatagctg gtgataccac gtaaaatcat cagcccgatc accaccagcg gcatccacac
    13801 cagcacggag cgatctgttt taccaaagcc atcatcaaga agtggcttaa ggagcgataa
    13861 catgaaggta tcgctggctg cgttgaggat taacgctacg cccgccacga tcagacccgc
    13921 tttaaaaggc gcaatggttg gccacagtcg gcggaacgtc tgccacgtag agagatcttt
    13981 gtcgttatgc attcaaaaaa ccagcatttg ttgaaatagc cgcatattct acccgttatc
    14041 cactggcacg ccaaaccact gatgatacca acgaggtaaa atttgctctc tgaggctgct
    14101 aatccgccag ccttgcgctg aaaaattgac cgtcacttga ccctgatgtg gagtatcaag
    14161 ccattgatat ccttgctgtt gatagcgatg cttaacttta ttagagggca atcgccatgc
    14221 gttatagcgt tatagcgcga tgccgatgcg agtgccactt ttccattcac tcgctgaatt
    14281 aatggcaacg atgatgaggt attactgcca tggtgaggta cctgaagcaa tgttgtctgc
    14341 acttgctgcc agtaacggct tagcatcttt tgttcagcgg ggacttcaat atcaccggtt
    14401 agaagaatgc tattcgtccc gtcataaacc ttaaccacac aggaatggtt atttccttta
    14461 tcgttgctag cttgtaaagg ccagtgcacg ctgaaacgca atccttgcca ttgccacgct
    14521 tcgccacgca cacagggctg atgatgttcc cagtttaacg gacttctgat ccataacatc
    14581 ggccatgtgt gcaatattga gtccagccct ccccggtgat ccagatgttc atgactcaga
    14641 ataacgcctt ccggttcaag attatgccag tggagccagg ggataatcag ttgttgccca
    14701 ctatcccctt cgggccaggc cagtcctgtg tcatagagaa tcgctttgcc gtttctggct
    14761 atcaccattg ccagcccttg cccgacatca agcatgtaca cctgccactc gtcaggtcga
    14821 ggtttttgcc acagcggcca gcacatcagc aagcctacag ccacacacat tgctggcaac
    14881 gttcgccagg cgtttaatcg ccataccacc agtaagaacc atggggaaaa tgatagccat
    14941 tgccaacgtt cagcaatgtt gatccaccct tcttgcaaac tctttaaccc ccagaaaagt
    15001 aaagccaaag accggtcggc aagaaaccat aacccttgct ccaggattaa cggcccgctt
    15061 aaatgcacaa ccatcgcggc gaggatcaac ggaaccgtga taaatgtcac caagggaatt
    15121 gctaatagat ttgcaataaa cgaggtcaga ctaatgccat gaaatatgac gatttgcaca
    15181 ggcataagca ggagtgtgat tcccagttgc aaatgaatga gggaaacaac tgcacgcaat
    15241 accggcggca gttgccactc aggacaggga aaccactggt accaaaaaat cagtgccgcg
    15301 accgcagcgg cagagagcca taaactttgc gagagaatgg caacaggatc catcagcaaa
    15361 attgccgcca gacaacatat ccatacatcc cagccactcc actgtcgccc acttaactta
    15421 agcattcccc acgtagcaag cgccaccacg gtacgcaatg caggaggttg cattcccgtc
    15481 aaccaggcat aaaaagcagc acagcagatt ccaccaatta atggcatttg ccagtggatc
    15541 cagcgcccag gcagaaaaac ttgcccaccg cgaatgagtc cggcagccag caacgccgca
    15601 aaagcgatgt gcaatcccga tatcgccatt aaatgcgccg ttccagtatc acgcatgata
    15661 tttttgattt ctttggggac ggataaccgt tcccccatac ctaaaccaag aataaccgca
    15721 ttccacatat agggttgcag cgttgtttgt agtgacgcca gatactgtgc acgcaggcta
    15781 caattcggtt caatgacact tgcctgcaga aagcggccga tgagcggctg atgctgggca
    15841 atggcataac gctggctatc aaagccgcca tcattaagtt ggccatgaac tgcacgaact
    15901 ttgagtttca ttgaccattg ttgtccagca caaaccgctt gcggaagata ttcgccatac
    15961 agcacaagac ctggcgcagg gaatatacgt cgaccttgta gatgagtaat ttgaccgtaa
    16021 tgagtggtca tgccgtcagt tgcagtgatc tcaacaattg catcctgcgt cgcgccagtt
    16081 aaggtttctc ctgcccacaa aatttgcttt gctgataata tgccccaaac gaaaaacagc
    16141 aacgtcagcg cgatataacg gacggtttta acagggataa atgccagtac gcaggcgaag
    16201 agagtcagaa acgcaagggt taatgtccca ggcaattggg gcaaaatcag caacggaaaa
    16261 attccgcaaa ttatgcatac gccgactgtc gttattttca tgcacccctc cctgtttatg
    16321 gaaagtgtgc aactttgttg agcggttgtc tggtgggaat tttgcgttcc ccgaggcaca
    16381 ttcagaagaa tttaacgaaa gggtgaaaac tgctcaaaac tctgcgaggc agcttccagt
    16441 tcctgattag agaaatgaaa aaagcacccg acaggtgctt ttctcgcgtt caagtttgag
    16501 taaaaactta accgtaaata ttggcgcgat cgcgcagttc tttaccaggt ttaaagtgag
    16561 gaacgtattt tccttccagt tctactttat cgccagtctt cggattacgt ccggtacgtg
    16621 gtgcgcggta gtgcaaagag aaactgccga aaccgcggat ttcaatacgc tcgccctgcg
    16681 caagagtcga ggccatatgc tccagcatct cttttactgc atcttcaacc gtcttggcgg
    16741 gaatgtgcga ttgctgggtg gcaagtcttt ctatcaattc tgacttggtc atgattcctc
    16801 cggttcctta aaggcaaatt aagcggctgc tgttgctgca ttgattaagg gcggccgtag
    16861 ccgcccttag tgcttgatta caggacgaaa cctgcaatct gtcaagtaaa ctcaacaaac
    16921 ttcggaataa aaatcccgaa gagtcagaga attactcgcc tttagctgct ttgaaagctt
    16981 cagccattgc gttgttggag aagtttgcat cttcctgttt gttaacagtt gcgattgcat
    17041 ctttctcgtc agcttcgtct ttcgcacgaa cagacaggct gattgcgcgg tttttacgat
    17101 caacgccggt gaatttagct tcaacttcgt cgccaacgct cagaaccagg gtagcgtctt
    17161 caacgcggtc acgggatgct tcagaagcac gcaggtaacc ttcaacgccg tcagccagtt
    17221 ctacggttgc gcctttagcg tcaactgcag ttactttacc ggttacgata gcgcctttct
    17281 tgttcagagc aacccagttg ttgaacggat cttctgcgag ctgtttaacg cccaaggaga
    17341 tacgttcacg ttctgcgtca acctgcagaa caactgcagc gatttcgtcg ccttttttgt
    17401 attcacgaac tgcttcttcg cctgcaacgt tccaggagat gtcagacagg tgaaccaggc
    17461 cgtcgatgcc gccgtctagg ccgatgaaga taccgaagtc agtgatagac ttgattttac
    17521 cttcaacacg gtcgcccttg ttgtgggttt ccgcgaactg ctgccacggg ttagctttgc
    17581 actgtttcag acccagggag atacgacgac gttcttcgtc gatatccaga accataactt
    17641 ccactacatc tccaacgtta acaactttgg acgggtggat gtttttgttg gtccaatcca
    17701 tttcggaaac gtgtaccagg ccttcaacgc cttcttcgat ttcaacgaag cagccgtagt
    17761 cggtcaggtt ggtcacgcga ccagtcagtt tggtaccttc cggataacgt ttagcgatag
    17821 ctacccacgg atcttcgccc aactgtttca ggcccaggga tacacgggta cgttcgcggt
    17881 cgaacttcag cactttaaca gtgatttcgt cgcccacgtt gacgatttcg ctcggatgct
    17941 taacgcgttt ccaggccatg tcagtgatgt gcagcaggcc gtcaacgccg cccagatcaa
    18001 cgaatgcacc gtagtcagtg aggttcttaa cgataccttt aacttccatg ccttcctgca
    18061 ggttttccag cagctgatcg cgctctgcgc tgttttcgga ttcgataacg gcacgacgag
    18121 aaacaacaac gttgttgcgc ttctgatcca gcttgattac tttaaattca agctctttgc
    18181 cttccaggtg cagagtgtca cgcaccggac gaacgtctac cagagaacct ggcaggaacg
    18241 cacgaatacc gttcagctca acagtgaagc cgcccttaac tttgccgttg ataacaccgg
    18301 taacagtttc agcatcttcg taagcttttt ccagcgtgat ccaggcttcg tgacgtttag
    18361 ctttctcacg ggacagcaga gtttcaccga agccgtcttc tactgcgtcc agagcaacgt
    18421 caacttcgtc acctacctgg atttccagct cgccctgggc gtttttgaac tgctcagccg
    18481 ggatggcgga ctcagatttc agaccagcgt caaccagtac tacgtctttg tcgatagcaa
    18541 caacaacgcc acgaacgata gaacccgggc gggtttcgat ttcttttaag gactcttcaa
    18601 agagttgagc aaaagattca gtcatgttta atcttcaggt ttatatttaa cgtccacctg
    18661 gctccatgcc ggatggggtt gtttaacata cccgctgtca ttccattgca acgggggtac
    18721 tgcaaattcg gtcgcttatg cgagagccaa tttctggcgc gcgtattgta gcgctttttc
    18781 aatcacttgc tcaatgctta aggtggtgga atccaacact aaagcatcgg ctgccggaac
    18841 cagtggcgct accgctcggt tacgatcgcg gtcgtcgcgt tctttgatct cggccaaaag
    18901 gcgctcaaag ttaacactaa agcccttctc ctgcaactgt agcatgcggc gatgcgcacg
    18961 ttcttccgag gaggcgtcaa ggaaaatttt cactggtgca tcagggaata ccaccgttcc
    19021 catgtcgcgg ccatcggcaa tcagacctgg taattcgcga aacgcgcgtt ggcgacgcaa
    19081 taatgcttca cgaacgcgtg ggaatgtcgc gacttgtgaa gccgcattcg ccacttcctg
    19141 agtacgaatt tcgccgctga catcttcccc ttcgaggatc acttccagat tgccattggt
    19201 tgacacaaaa cgtacatcca gatgggatgc cagcggtacc agcgcatctt ctgacgcaac
    19261 atcaacatgg tgatgtaatg ccgccaatgc cagtacgcga taaattgcac ccgaatccag
    19321 cagatgccat tgcaatgctt ccgccatagc cttacacaag gtgcctttcc ctgcaccgct
    19381 tgggccatca atggtaataa ccggggcaat tgccgtcatc tttatctcct taaaacaggc
    19441 gtaccgttaa cataaccgcg cgcattatac gcgccgacgc cacaaatcgt taacgttgtg
    19501 tgcaaaaacc agttttgtct gtattcagat ggggatttat tgcgcaatta tagcgggctg
    19561 gcagaagacc agcccgaaag atgacaatga tttacttacc agaggcgata cgatcacgga
    19621 tgtgttgcgc acgctctgtt gatggtgggt gagagtcaaa catggactgg gtgcgaccgc
    19681 catccagact agccagtttt tcaaagctgc caaccagccc ctaggtgctg atgccacgtt
    19741 tcttcaacag atcaaaggag aaatcatctg cttcggactc tttatcacgg gagtatttag
    19801 cattaatagc gccttctgcg atatcaccca attgtgagcg ggaaagctgg gaagccacac
    19861 cgctggtagc tgaaatggca tcgcgtgcgg caacgatcgc ataagaaact ttcatttcag
    19921 ccagcgagtg acccaacgcg acgtggccca gttcatggcc cagaacacct tcaatttcgt
    19981 tgtcattcat catgtccatc aggccactgt agacacggac acagccgttc gccatcgccc
    20041 atgcgttgac gtcgctggtc atataaacct atagttgacc ggcgtgccat taatattgtt
    20101 acccaatgct ttggcgattt ttgccagacg tttaccgtac ttgctggatt tacttgcgac
    20161 ttgattgccg ctgtccattt cggcacagcc ctgattggca atcgcttttg catcggcatc
    20221 gcttaatgtt gctgctttat aggcatttaa accggagctg atagccatat tggtatcaat
    20281 accgtgggta ttttgacacc ctgtcagtaa tgctgcagag gtcgcaatcg ccagcagtaa
    20341 tttagtattc ttcatgtgaa tcatccgttg attaatcata tataaacatt atgtatcaac
    20401 aacttacatt gacaagcgac gctaccatta atcaaaatga ctcacaaggt ccgaaaaaaa
    20461 acgccgacaa tgtg
//
LOCUS       DAJVUK010000067        20465 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.067, whole genome shotgun sequence.
ACCESSION   DAJVUK010000067 DAJVUK010000000
VERSION     DAJVUK010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20465
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.067"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..880
                     /locus_tag="OQQ57_002229"
     CDS             <1..880
                     /locus_tag="OQQ57_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CS1-pili formation C-terminal domain-containing
                     protein"
                     /protein_id="HCS1956982.1"
                     /translation="GDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDG
                     QYGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVK
                     GFSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTT
                     NIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAE
                     DGGFTLEINGSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQ
                     PKLRGNVQTAQREVAP"
     gene            877..1966
                     /locus_tag="OQQ57_002230"
                     /pseudo
     CDS             877..1966
                     /locus_tag="OQQ57_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001352530.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CblD"
     gene            complement(2054..3352)
                     /gene="exuT"
                     /locus_tag="OQQ57_002231"
     CDS             complement(2054..3352)
                     /gene="exuT"
                     /locus_tag="OQQ57_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexuronate transporter ExuT"
                     /protein_id="HCS1956983.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSRGGLA
                     IARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFSLVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQESHNDPAPQH"
     gene            3835..5247
                     /gene="uxaC"
                     /locus_tag="OQQ57_002232"
     CDS             3835..5247
                     /gene="uxaC"
                     /locus_tag="OQQ57_002232"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HCS1956984.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            5262..6749
                     /gene="uxaA"
                     /locus_tag="OQQ57_002233"
                     /pseudo
     CDS             5262..6749
                     /gene="uxaA"
                     /locus_tag="OQQ57_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
     gene            6832..7383
                     /locus_tag="OQQ57_002234"
     CDS             6832..7383
                     /locus_tag="OQQ57_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HCS1956985.1"
                     /translation="MTAYWLAQGVGFIAFLIGITTFFNRDDRRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTRALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(7388..8632)
                     /gene="sstT"
                     /locus_tag="OQQ57_002235"
     CDS             complement(7388..8632)
                     /gene="sstT"
                     /locus_tag="OQQ57_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HCS1956986.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDLSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(9248..10213)
                     /gene="alx"
                     /locus_tag="OQQ57_002236"
     CDS             complement(9248..10213)
                     /gene="alx"
                     /locus_tag="OQQ57_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HCS1956987.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINARVNYRHDKQRGE"
     gene            complement(10497..11483)
                     /locus_tag="OQQ57_002237"
     CDS             complement(10497..11483)
                     /locus_tag="OQQ57_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311996.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCS1956988.1"
                     /translation="MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFAN
                     DFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAE
                     VDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
                     DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMD
                     YGDFSVTLLHSKVSDSVLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHI
                     NTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL"
     gene            complement(11562..12245)
                     /locus_tag="OQQ57_002238"
     CDS             complement(11562..12245)
                     /locus_tag="OQQ57_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HCS1956989.1"
                     /translation="MQPRLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQL
                     TWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDE
                     ASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
                     AKQYSIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHSQPKYLGPSVMIGPF
                     SEHGCPAKE"
     gene            complement(12322..12825)
                     /locus_tag="OQQ57_002239"
     CDS             complement(12322..12825)
                     /locus_tag="OQQ57_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HCS1956990.1"
                     /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            12910..14046
                     /gene="rlmG"
                     /locus_tag="OQQ57_002240"
     CDS             12910..14046
                     /gene="rlmG"
                     /locus_tag="OQQ57_002240"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HCS1956991.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
                     PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
     gene            14331..14645
                     /gene="higB"
                     /locus_tag="OQQ57_002241"
     CDS             14331..14645
                     /gene="higB"
                     /locus_tag="OQQ57_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin HigB"
                     /protein_id="HCS1956992.1"
                     /translation="MHLITQKALKDAAEKYPQHKTELVALGNMIAKGYFKKPESLKAV
                     FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
                     KK"
     gene            14642..15058
                     /gene="higA"
                     /locus_tag="OQQ57_002242"
     CDS             14642..15058
                     /gene="higA"
                     /locus_tag="OQQ57_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HCS1956993.1"
                     /translation="MIAIADILQAGEKLTAVVPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLADLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
     gene            complement(15103..17121)
                     /gene="fadH"
                     /locus_tag="OQQ57_002243"
     CDS             complement(15103..17121)
                     /gene="fadH"
                     /locus_tag="OQQ57_002243"
                     /EC_number="1.3.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HCS1956994.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLHTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSESGGQFNIAKQIPGKEEFYETLRYYHRMIEVTGVTLKLNHTVT
                     ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIARFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELNARRAIAQGTRLALEI"
     gene            complement(17347..19699)
                     /gene="ygjK"
                     /locus_tag="OQQ57_002244"
                     /pseudo
     CDS             complement(17347..19699)
                     /gene="ygjK"
                     /locus_tag="OQQ57_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417551.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
     gene            complement(19716..>20465)
                     /gene="ygjJ"
                     /locus_tag="OQQ57_002245"
     CDS             complement(19716..>20465)
                     /gene="ygjJ"
                     /locus_tag="OQQ57_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgjJ"
                     /protein_id="HCS1956995.1"
                     /translation="VPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWW
                     GDFTPDLGYVIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYD
                     DKYTYPAMMNGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRAD
                     GLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGG
                     RFATAFDSRFYMKNASHDPSDQIFLMQYFYW"
BASE COUNT         5003 a         5357 c         5364 g         4741 t
ORIGIN      
        1 tggcgatcaa acgtcatggc agttatcgca taccttttat aatgattcat tcagccataa
       61 agaacttggc gtaaccgtcg gaggcctgaa caccgatacc ataaacagcg cggttaacgg
      121 gcgttgggat gggcaatacg gaaatgtcta cgctaccgta tctgatagtt atgaccgtaa
      181 gaatcatgat catctttcgg cctttacggg cacttatagc tctacgctgg ctgtcagtcg
      241 ctatggcgtt aatttgggag ccagtggtac agacgatttg ctgggtgcgg tattggtgga
      301 tgtgaaaggc ttctctgaac aggatgaaga gagtcaggat ctgcaactcg aagcgcgggt
      361 ggcaggcagc cgaactttgc agcttggtca aagcgacagt gtgttgttcc cttatcctgg
      421 atttcagtct ggttttgttg aggttaacga cagtagccag ggcaatcagc aggggacaac
      481 aaacatcatt aacggtgcag ggaatcgtga attaatgttg ttgcctggca agctgcgcta
      541 tcgcgaagtg tctgccagct ttaactacaa ctatatcggt cgtttattac tgccggcagc
      601 ggtgaaaaaa ttcccgattg tggggctgaa cagcgccatg ttactggtag ctgaagatgg
      661 cggatttaca cttgaaatta acggcagcga aaaagagctc tatctgcttt ccgggcagca
      721 attccttaag tgtccactga gtgttgaaaa gaaacgcgcc agcattcgtt acagcggaga
      781 tgttacttgt agtgtggtga cttattcaca attaccggag ttgaaacagc ctaaattacg
      841 tggaaacgtt cagacggcgc aaagggaggt tgcaccatga gaaatcgatt gattgcggcg
      901 atattgggct tgtttggcac gctcactggc gttcaggcag ctcctgacgt gaccagtgaa
      961 attacgtatg atttggcatc tggtagagcg gattattact tctggaagga tgaagcgtcg
     1021 gcaggaaata atggatatat gtggtatgaa tgttcgtatc ctgacctcca acaaacctgt
     1081 acagctaatg gaaatatatc gacagtacaa atctatttaa ctgaacaacg cagtgggatg
     1141 cgttggccgg taaaactcaa aggatttaaa acagccattg taagtagcga tgaagcgccg
     1201 ctaggatgca agggggggca aagggcttca gacgaatctt aaggattcta atagatcttc
     1261 atgtacagaa gatggtcaac attattatat atacgataca aagtttctta cgctctacct
     1321 tgagcagaca gagatgaaga atttgccgat tggtggcgtc tggaagggga aagttaaatt
     1381 acattcgaac agcccggccc aggactattt cgcaaatatt accctgaata cgctcgaccc
     1441 caaccatatt gacgtgttct tcccggagtt cgcccacgcc acgccgaggg tgcagttaga
     1501 cttgcatcca acaggaagcg ttaacggcag caactacgcg caagatctga ccatgttgga
     1561 catgtgcctg tacgatggtt ttaacggtaa tgccatcagt tatgaaatca tgctcaaaga
     1621 tgaagggcga ccagctgcag ggcgcagaga cggtgacttc tctatctatc gtcagggagg
     1681 aacctctacc gacgagggag aacgcattga ttaccgggtc aaaatgtaca acccggaaac
     1741 cggtgggcaa attgatgtgc gcaataatga aaatatggtc tggaacagca ttaacctgaa
     1801 aagtgtgcgt ccggtggtac tgcccggtat tcgctatgcc gtgatgtgtg tgccgacacc
     1861 cttggctctg gcagtcgata aattcagcgt gatggataaa caggccgggt actacatggg
     1921 caaattgtca gtaatcttta cgccttcctt gccaaccatc aattaaccct gcaaagcgga
     1981 caaacgcttt tttctatata aacgacgaag ccgcctgata aggcggcttc gtcgttataa
     2041 cttacgttaa acgttaatgt tgcggtgcgg gatcgttatg tgattcctgc gctacctcaa
     2101 tcgccggttt gttctgcaac acggtccaga taaccagcgc acctaacagg tcgaacactg
     2161 ccagtactgc gaacagcggg ctgaagccga tggtgtcagc cagtgcaccg acaaccagcg
     2221 aaaacagcgt acttgccagc catgcggaca tcccggttaa accgttcgcc gtcgccactt
     2281 cgttacgacc gaacacgtca gaagagagcg taatcagcgc gccagacagt gcctggtgag
     2341 caaaaccacc gatacacagc agcataattg cgacatacgg gttggtgaac aggccgatca
     2401 tacccgggcc aatcatcagc actgcaccca gcgttacgac catcttacgg gaaacgatca
     2461 ggttcacacc aaaccaacgc tggaacagcg gcggcaggta accaccgagg atacaaccga
     2521 ggtcagcaaa cagcatcggc atccaggcga acatcgcgat ctctttcagg ttaaagccgt
     2581 aaactttaaa catgaacagc gggatccacg cgttaaaagt accccaggct ggttctgcca
     2641 ggaaacgcgg cagcgcgata ccccagaact gacggttacg caggatctga ccaacggaca
     2701 ttttcttcgc cgtgctcacc tggtgctggg cttcctgacc attaataata tagtcgcgtt
     2761 cttcatcggt cagatgcttc tggtcgcgcg gatgtttata gaaaatcagc catgccatcg
     2821 cccagataaa gctcaatgca ccggagatga taaatgccat ctgccagctg tgcattacga
     2881 ttgcccatac caccagcggc ggcgcaatca tcgcaccaat cgaagaacct acgttaaagt
     2941 aacctaccgc gatggaacgc tctttcgccg ggaaccattc ggagctggct ttcagacccg
     3001 ccgggatcat cgctgcttcc gcggcaccga ctgcaccacg agcaatcgcc aggccacccc
     3061 tgctaccagc cagcgcggtt gcaccacaga atacggccca cagtacagca aacattgcat
     3121 aaccgatttt cgtacccagc acatccagta catagcccgc taccggttgc atgaccgtat
     3181 aagcagcaga ataggctgcg atgatatagg aatactgttg ggtggagatg tttaactctt
     3241 ccatcagagt tggcgcagct gccgccacag tgttacgcgt caggtaacca agcacggtgc
     3301 caagcgtcac cagtgcgatc atataccaac gtaacccttt aattttacgc atgtaaaacc
     3361 tcatcgtttt gttatatccg caggaagcgc ggccatcatc ccgccagagg ctgaagatgt
     3421 tagttacgac cgggtaaccg aaaaaaaacc ggcacgcccc gaacgttgcc atgaaagttt
     3481 cgtgctaatt cggcttccgt accggttaac ccgattcatc taacaaatga atgaatcggc
     3541 aatttgcatt ccgtcgactt atgatttgcg acggcagaaa gatgacttgt catacaactt
     3601 taaaaggtga gagccatcat aaatgtgcga atatttgtag ggacattacc tgacgacagc
     3661 gaggccagta ctggcgcggc ctgcagcgag atttaccact ttgagagtaa tttttttaac
     3721 tacgtttatt gatctaactc acgaaaatat cttcggactc tggaaattgg tgtgataact
     3781 ttgtcagcat cgcaccataa gcaagctagc tcactcgttg agaggaagac gaaaatgact
     3841 ccgtttatga ctgaagattt cctgttagat accgaatttg cccgccgtct gtatcacgac
     3901 tacgcaaaag accagccgat tttcgattac cattgccatt tgccgccgca gcagattgcg
     3961 gaagactatc gttttaaaaa cctgtatgac atctggctga aaggcgatca ctacaaatgg
     4021 cgcgctatgc gtaccaacgg tgtggccgag cgtctgtgta ccggtgatgc gtctgaccgt
     4081 gaaaaatttg acgcctgggc ggcgactgtt ccgcacacta tcggcaaccc gttataccac
     4141 tggacgcacc tcgaactgcg tcgtccgttt ggtatcactg gcaaattgct ttctccgtca
     4201 actgccgatg aaatctggaa cgaatgtaac gaactgctgg cgcaggataa cttctccgcg
     4261 cgcggcatca tgcagcagat gaacgtgaaa atggtcggca ccaccgatga cccgatcgat
     4321 tctctggagc atcacgcaga gatcgccaaa gacggctctt tcaccatcaa agtgctgccg
     4381 agctggcgtc cggacaaagc cttcaacatc gaacaggcga cctttaacga ctacatggcg
     4441 aagctgggcg aagtttccga taccgacatt cgccgctttg ctgacctgca aactgccttg
     4501 accaaacgtc tggatcactt cgccgctcac ggctgtaaag tgtctgacca tgcgctggac
     4561 gtggtgatgt ttgctgaagc gaacgaagcg gaactggaca gcattctggc gcgccgtctg
     4621 gctggcgaaa ccctgagcga gcacgaagtg gcacagttca aaactgcggt actggtgttc
     4681 cttggtgccg aatatgcacg tcgcggctgg gtacagcagt accacattgg cgcgctgcgt
     4741 aataacaacc tgcgtcagtt caaactgctg gggccggatg taggctttga ctccatcaac
     4801 gaccgtccga tggcagaaga gttgtctaag ctgctgagca agcagaacga agaaaacctg
     4861 ctgccgaaaa ccattctgta ctgcctgaac ccgcgcgata acgaagtgtt gggcaccatg
     4921 atcggtaact tccagggcga aggtatgccg ggcaaaatgc agttcggttc cggctggtgg
     4981 tttaacgatc agaaagacgg tatggaacgt cagatgaccc aactggcgca gctcggtttg
     5041 ctgagccgct ttgtcggtat gctgactgac agccgtagct tcctgtcata cacccgtcac
     5101 gaatacttcc gccgcattct gtgccagatg atcggtcgct gggtggaagc gggcgaagca
     5161 ccggcggaca tcaacctgct gggcgagatg gtgaaaaata tttgctttaa caatgcgcgt
     5221 gactacttcg ccattgaact gaactaaggt ctggggttga tatgcaatac atcaagatcc
     5281 atgcgctgga taacgtcgcg gtcgctttag cggatttggc tgaaggcaca gaagtcagtg
     5341 tcgataacca gactgttacg ctgcgccagg atgttgctcg tggacataaa tttgcgttaa
     5401 cggatatcgc aaaaggggcc aatgtcatca aatatggcct gccgattggt tatgcattgg
     5461 cggatattgc ggcgggggaa cacgtccacg cccacaatac gcgcacgaat ctgagcgatc
     5521 tggatcagta tcgctatcaa cctgattttc aggatctgcc tgcgcaagcg gcagatcgtg
     5581 aagtgcagat ctatcgtcgc gctaacggcg atgtcggggt gcgtaacgag ctgtggatcc
     5641 tgccaaccgt gggctgtgtc aacggcatcg cgcggcagat ccagaaccgt tttctgaaag
     5701 agaccaacaa cgctgaaggt accgacggcg tgttcctctt cagccacacc tacggctgct
     5761 cacagctggg cgacgatcac attaataccc gcaccatgct gcaaaacatg gtgcgccacc
     5821 cgaacgcagg cgcagtgctg gtgattggtc tgggctgtga aaacaactag gttgccgcat
     5881 tccgtgaaac gctgggcgat atcgatcctg aacgcgttca tttcatgatc tgccaacagc
     5941 aggatgatga gatcgaagcc gggatcgagc atttgcatca gctgtataac gtgatgcgca
     6001 acgataaacg cgagccaggc aaactcagcg aactgaagtt tggtctggag tgcggtggtt
     6061 ctgacggtct ttctggtatt actgctaacc cgatgctggg gcgtttctct gactacgtga
     6121 ttgctaacgg cggtactacc gtactgaccg aagtgccgga gatgtttggc gcagagcagt
     6181 tgctgatgga ccattgccgc gacgaagcaa cgtttgaaaa actggtcacc atggtcaacg
     6241 actttaaaca gtactttatt gcccatgatc agccgatcta cgaaaaccca tcaccgggga
     6301 acaaagcggg cggtatcacc acgctggaag acaaatcact tggctgtacc cagaaagcgg
     6361 gttccagtgt cgtggttgac gtgctgcgtt acggcgagcg tctgaaaacg ccagggctga
     6421 acttgttaag tgcgccgggt aacgatgccg tagcgaccag cgccctggcg ggtgcgggct
     6481 gccatatggt gctgttcagt actggtcgcg gcacgccata cggtggattt gtgccgacgg
     6541 tgaaaatcgc caccaacagt gaactggcgg cgaagaaaaa acactggctc gactttgacg
     6601 cgggtcagct gatccacggt aaagcgatgc cgcagttgct ggaagaattt atcgacatca
     6661 tcgttgagtt tgccaacggt aaacaaacct gcaacgagcg taacgacttc cgcgaactgg
     6721 cgatcttcaa aagcggcgta acgctataaa gtcgaaatga gttgttaata aaaaacggcg
     6781 tttcataatg tgaagcgccg tttgcttttc catacctgat aaggatttat catgaccgcg
     6841 tattggctgg cccagggcgt gggtttcatc gcctttctga ttggtatcac aacatttttc
     6901 aatcgtgacg accgtcgctt caaaaagcag ctttcggtct atagcgccgt tattggcgta
     6961 catttttttc ttctgggcac ctatcccgct ggtgccagtg ccatccttaa tgccattcgt
     7021 acattgatta ccttacgcac gcgcagctta tgggtaatgg cgatttttat tgtgctgact
     7081 ggcggaattg gcctcgcgaa gttccatcat cctgtcgaac tattgccggt tatcggtacg
     7141 attgtcagta ccagggcgct gttccgctgt aaagggctca ccatgcgctg cgtgatgtgg
     7201 ttttcaacgt gttgctgggt gattcacaac ttctgggcgg ggtcgatagg cggcacaatg
     7261 attgagggta gttttctgct tatgaatggc ttgaatatca ttcgtttctg gcggatgcag
     7321 aaaaggggaa ttgatccgtt taaagtagag aaaacccctc ccgccgtaga cgaaaggggt
     7381 taaacaatta attacgcagg gcgctatttg ccagacgatc gtcttccgcc tggcaagctg
     7441 ccgcagtgaa cagcacgtca gttgaagagt tcagcgcggt ttcgcaagag tcctgcaata
     7501 cgccgatgat aaagccgacg gcaaccacct gcatggcgat atcgttcgaa ataccgaaca
     7561 tattacaggc cagcgggatc agcagcagag aaccccccgc cacgccggat gcgccacagg
     7621 cacacagaga agccaccacg ctcaacagca gcgccgtggg cagatcgacc gggataccca
     7681 gcgtattaac cgcagccagc gtcaacacgg taatggtgat tgctgcgccc gccatattga
     7741 tggtggcacc cagcggaata gaaacggaat aggtatcgcg atccagattc agcttttcac
     7801 acagtgccat attcaccgga atgttcgccg cagagctgcg ggtgaagaag gcatacacgc
     7861 cgctttcgcg caggcacagc agcaccagcg ggaacgggtt acgacgaatt ttccaccaca
     7921 ccagcaatgg gttaaccacc agcgccacca gtaacataca gccaaccagc acgaccagca
     7981 gttgcgcgta gccccacagt gtggagaaac cggtggttgc cagggtagaa gaaaccagac
     8041 caaaaatacc aatcggtgcg aagcgaatga ccagtttcac cataaaggtg acggcattcg
     8101 acagatcgtt gaccaggttt ttggtggtct cgttaccgtg acgcagtgcg aaaccgaggc
     8161 caattgccca caccaggatc ccgatgtagt tacctttcag cagcgcgtcg atggggttgg
     8221 aaaccatgct cattaccagc ccgcgcatca cttctacaat gcctgacggt ggcgaaatat
     8281 cacccgcgct actggataag tgcagggtag aagggaaggc gaagctgaaa acgactgcgg
     8341 ccagagcagc agagaaggta cccagcagat agaggaacaa aatagggcgg atattggttt
     8401 tctgcccgtg ctggtggtta gcaatagatg ccatcaccag catcaacacc aggatggggg
     8461 caacggcttt cagtgcgccg acgaacaaag tacctaacag accaacagct tccgccgcgg
     8521 gttttgagat ccatgccaga agaatcccca gaacaaggcc gaccaggatt tgttttacca
     8581 ggctgccatg agccagacgc cggaatagcc ccggtgaacg ttgcgtagtc atttttcgat
     8641 cctttcattg tgttgtcgca catccctggt gcgttctgtc gacgcatctt tcaggatgta
     8701 acaaagtgtt tgcaaggtcg agtataagga aagttacagc ttcgggaagc gaaaaatgct
     8761 ggattttaaa gagaggtcat attttgcaac ttaattgtta catttgtttg acataaacag
     8821 agggaaggac tggctactaa ggctgattag ataacatatg ggcaaaacta tttggaatat
     8881 gagaacggtt gcgctccttt aatgtgctat gccatataaa gtcactggcg cagggagcgc
     8941 gcagggggca gccaatcgcc gccgccccct gcacccccag gctctggcga acaaaatcgc
     9001 cgctgcgcga ttccctcagc ttatcccttg cggctaccgg gtcgggcgca agggaacgtc
     9061 cctgtaagat gcgccctcgc cgcgcatcca tgcgcgtcgc cccggcctcc agggaacgct
     9121 tcggcgattt tgacgccacc aacacccgtg cggtcttttt gtaaagagct acaagccaat
     9181 tacataatta atagctcacc tttgtctgga atgagttatc tctaggaatg gcttaatata
     9241 cagcgaatca ttctccccgc tgcttatcat gccgataatt caccctggcg ttgataataa
     9301 acgtcatcac cagaatgcca aacaccacgc ccagcgagac ggcgattgga atatggtaga
     9361 agtcgacaat cagcatcttg ataccgataa acaccaggat caccgccagg ccatatttga
     9421 gcatcgagaa acgctctgct acgcccgcca gcaggaaata catcgcacgc aggccgagga
     9481 tcgcaaacag gtttgaggtc agcacaatga acgggtcagt ggtcacggcg aagatagccg
     9541 gaatgctatc cacggcgaaa atcacgtcgc tcaattccac cagaatcagt accagcatca
     9601 gcggtgtggc gtacagcaat ccattcttac gcacaaagaa atgctcgttg tcgatggtgt
     9661 cggtcatgcg caaatgaccg cgtagccagc gcaccagcgg cttgtcgcca atgcctgatt
     9721 catcttcatg ggcgagcgcc atcttcacgc cggtaaacag caggaaggca ccgaagatat
     9781 acaggatcca gtcgaactgc gaaattagcc agctgccagt gaagatcatg atggtacgca
     9841 gaacaatcgc cccgagcacg ccatacacca gcacgcggcg ttgtaatgcc gccggaacag
     9901 agaaatagct gaacaacatc agccagacaa agacgttatc gaccgccagc gatttctcaa
     9961 tcagataacc cgtgagaaag gccagtgcct gtggatcggc aacggcgcga ccttcggttt
    10021 gcaccagata ccaccagaaa gcggcgttaa acagtaacga cagcgtcacc caaaccagcg
    10081 accaggccgc agcctgtttc atggtcatgg catgtgcccc acgacgcccc tgcaacaaca
    10141 ggtcgatagc cagcataatg gcgacaacaa cagcgaatcc gccccatagc aacggcgtgc
    10201 cgacagtatt catagaagtt ccttacacat aaaaaaaacg gccaacgtcg gaagacgtca
    10261 gccgctgctt tttatgcata gacctcgcct tccggcaagg tctcacttac aacaaaaaag
    10321 gaatacgtct gcgtattcct ttcgggttgc ccggtgaccg gatgtggttt ttcacacatc
    10381 gtaatgacga tcgaccggca atgaagttac tcccctttgc aggtaacaaa gtatgacaga
    10441 ccattcagcc agtcaatggt ctgttacata ccttttacac tgttttactt tggcaattat
    10501 agttttacgc tatctgccgg aaaaatcacc ccagtctggc ggcggatctc agtcagcagt
    10561 ttggcggtga tgcgactgac cgccagccct ggatgatcca ccagatgctc atccaccagg
    10621 gtagcaaaca gctctgcttc gtagagcatg gtattaatat gctgcggctg ggtgagatcc
    10681 tgcatctggc tgccacgcgg cacgaagcac actttctggc attcagacag tttttcaatc
    10741 accagcgatc ccgcttcgcc ctgaatctcg ctttccagga cagaatcact gacctttgag
    10801 tgcagcaacg taacgctgaa atcaccgtaa tccatcacca ccacgccgtg ggcatctacg
    10861 ccgcttgcca acaaactggc ggttgcctgc acgcttttcg gttcaccgaa taatgccacc
    10921 gccgacgcca ggcagtaaaa gccgatatcc ataattgaac cgttagagaa tgccggatta
    10981 aaggtgttgg gattctcacc atccaggtaa cgttgatacc gcgaggaata ctggcaatag
    11041 ttgaaaaaga ctttacgcaa tttgccgact ttcggcagcg cctggcgcag caaatgaaag
    11101 ttcggcaggc tggcggtttt aaatgcctca aacagcacca cctgattttc ccgcgcacag
    11161 gcaatggcgg catccacttc cgccagattc gacgccagtg gtttctcgca aatcacatga
    11221 attttatggc taaggaaaag ttgtgtctgg gaaaagtgca gggcattcgg gctggcaata
    11281 tacaccgcgt caatggcatc gctttccgcc atcgcttcca gcgaggtaaa cagatgctcg
    11341 acagaaaaat cattggcgaa gtgctgggcc tgttcaaggc tgcgggaata tacggcggtt
    11401 aacttgtatt taccgctctc atgggcggcc tcgacgaact ggcgagtgat ccagttcgta
    11461 ccaatcacag cgaaacgtat cataacgcgt ggatactcca taaagggatt ctgtcgtcaa
    11521 tgtagcacgc ctttttcatc ttcgacgtgc gcagatacgc attattcttt tgccggacag
    11581 ccatgctcac taaacggccc aatcatgacc gatggcccga gatatttcgg ctggctatgg
    11641 aggattttgg cgtcaatcac ggcgctgaca cgagcgagtt tctctcgcag ttgagtataa
    11701 aaaccgtgct tcatattgag gtcaggcgcg ttaaaaccga tagcgtcgat gctgtactgt
    11761 tttgccagcc agatggcgcg ttggttatga aattcttgcg agataatggt gatatggttt
    11821 tcaccaaaaa cctttttggc acgcactacc gaatccagcg ttgagaatcc ggcatagtcg
    11881 cagaagatca ctttcgccgg tacgccttta gcgatcaaag ccttctgcat acctgatgct
    11941 tcatcgtaat ttttacgtcc gttatcgcca cttaccagta gccatttcac ttttccggcg
    12001 tggtacaacg ctgctgcggt atcaatacgt cgggtaaagt agcgattacc cggcctggcc
    12061 cccagcaata agcccacgtt acgcgccgga actgcgttga catcgctcca ggtcagctgc
    12121 ttgctggcgt tgaccattac tcgatcggcg ataaaaatgg tcgctcctgc cacaagtaac
    12181 agtaagcagg caatctttag agtccggcga gaaaaacaaa tacggagaag aaggcggggc
    12241 tgcatggtcg ttatccttaa cgaaaggggg gaggtcgatt ttaggcgcta aagaaagaaa
    12301 agataacgcc tgacatcatt ttcagatttt gtcctgccca agcgacaact gcgttagcca
    12361 cagccgggtg tcgaactcca gctggtggta ctgcggctcc atatggcagc acaactggta
    12421 aaacgctttg ttatgctctt tctccttcag gtgcgccagt tcgtgcacca cgatcatacg
    12481 taaaaacggt tccggcgcgt tgcgaaacac agtagcgacg cggatctctg cttttgcttt
    12541 cagcttgccg ccctgcacac gagaaacagc ggtatgtaac ccgagcgcgt tttttagcac
    12601 atggatctta ttgtcataca tcactttatt gatcggcggg gcattgcgca gaaactgatt
    12661 ttttagatcc tgagtatatt gccagagggc tttatcggtg gcgtagtcgt gtgttcccgg
    12721 atagcgtttt gccagcacat cgcccagacg ctgttcgtta atcagcgttc gcacctggga
    12781 aagtagctgc tcgggataac cctgaagata agtaagattg ctcataaccg cccacgaaaa
    12841 agagaaaaag ggtatactca cgcacccttt tcaggggcaa cgtcgaaatt ttatcattca
    12901 ggagggccga tgagccactt agacaacggt ttccgttcac tgacactaca acgttttccg
    12961 gcgacggatg acgttaaccc gctacaggcg tgggaagcgg cggatgaata tttgctgcaa
    13021 cagttggacg acacagaaat ccgcggcccg gtgttgatcc tgaatgatgc ctttggtgcg
    13081 ttaagctgcg cgctggcgga acataagccg tacagcattg gcgactcata catcagtgaa
    13141 ctggcgacgc gcgagaattt acgcctcaac gggattgatg agtcgagcgt gaagtttctc
    13201 gacagcaccg ccgactaccc gcaacagccg ggtgtggtgc tgatcaaagt gccgaaaaca
    13261 ctggcattgc tggaacaaca actgcgtgcg ctgcgcaaag tggtcacgtc ggatacacgt
    13321 attattgccg gtgccaaagc ccgtgacatt cacacttcca cgctggaact gttcgaaaaa
    13381 gtgctcggcc cgaccaccac cacgctggca tggaaaaaag cgcgcctgat taattgcacg
    13441 ttcaatgaac cgccgctggc cgatgcgccg cagaccgtta gctggaagct ggaaggtact
    13501 gactggacta tccataacca tgcgaatgtc ttctcccgca ccgggcttga tatcggcgcg
    13561 cgcttcttta tgcaacatct gccagagaat ctcgaagggg agattgtcga tctcggttgc
    13621 ggtaatggcg ttattggtct gacgctgctt gataaaaatc cgcaggcgaa agtggtgttt
    13681 gtcgatgaat cgccgatggc ggttgcttcc agccgtttga acgttgaaac caacatgcca
    13741 gaggcgttgg atcgcagcga gtttatgatc aacaacgcgc tctccggcgt ggagcctttc
    13801 cgctttaatg ctgtgctctg caacccgccg tttcaccaac aacatgcgct gaccgataac
    13861 gtcgcctggg agatgttcca ccatgcccgc cgctgcctga aaatcaacgg cgagctgtat
    13921 attgttgcca accgtcacct ggattacttc cataaactga agaagatttt cggcaactgc
    13981 accaccatcg ccacgaataa taaatttgtg gtgctgaaag cagtgaagct ggggcgtcgt
    14041 cggtaagatt gggagttacc tgccggatgc ggcgttaacg ccttatccgg cctacgttca
    14101 gcacgttact cccaggccgg ataagacgcg gcaagcgtcg catccggcaa tgtctgccca
    14161 gttctggaat cgcgcttcca taaaacaaaa aatccctctc accatcctct acattctctt
    14221 gtttagcgtt tttctacgtt tattcttccg tcacacagat aaattcatcc gttgccaatc
    14281 tgtcaacgga tgttatcata ttgccaattt gtcaacggac gtgatgaaga atgcacctga
    14341 taactcaaaa agcattgaaa gatgctgcgg aaaaataccc gcaacataaa acggagttgg
    14401 tggctctggg gaacatgatt gctaagggat atttcaaaaa acctgagtca ttaaaagcag
    14461 tattcccatc tctggataac ttcaaatatc tggataagca ttatgttttc aatgttgggg
    14521 gcaatgaatt acgtgttgta gcaatggtct tttttgaatc gcaaaagtgc tacatacgtg
    14581 aagttatgac gcataaagaa tacgatttct ttaccgctgt tcatcgtact aaggggaaaa
    14641 aatgattgcg attgccgaca tcttgcaagc aggagaaaag ctaactgcgg tggtaccttt
    14701 tctggcgggt attcagaacg aggaacaata cacccaggcg ctggaactgg tagatcatct
    14761 gctgctcaac gatcctgaaa accccttgct ggatctggtg tgtgccaaaa taaccgcgtg
    14821 ggaagaatca gcgcccgaat ttgcggaatt taatgccatg gctcaagcca tgcctggcgg
    14881 tatagccgtg attcgtaccc ttatggatca atatggttta acccttgccg atctgccgga
    14941 aattggcagt aaatctatgg tgtcacgcgt tttgagcggg aagaggaaat taacgctgga
    15001 acacgctaaa aaattggcaa cgcgattcgg catttctccc gccttgttta ttgattaacg
    15061 cgacgtgccg gatgcgttgc atccggcgct tcaaataacg atttaaatct ccagcgccag
    15121 ccgtgttccc tgggcaattg cccgtcgtgc gttcagctcc atagccacat cgcagccgcc
    15181 aattaaatgc acagttttcc cgctatcaat cagcggttgc gccagcgcgc ggtttggctc
    15241 ttgccctgcg cagatcacca cattgtccac agctaatacc tgcgtttcgc cgttgatcac
    15301 cacatgcagc ccgtcatcgt caatcttctg ataacttacg cctgggatca ttttcacacc
    15361 ccgcgagagc agggtggtgc gatggatcca gccggtggtt ttgcctaacc cctgtcccgg
    15421 tttgctggct ttgcgctgga gcatcacaat ttgccgtggg ctacgcggga tctgcattcc
    15481 ctgcgggctt aagccaccag cctgttgtag gctgctgtcg atcccccact cattacagaa
    15541 cctggcgata ttctggctgg tggattcgcc cggctgactt aaatacatcg ccgtatcaaa
    15601 accaatcccg ccacaaccga tgatggcaac cttgttgcct accggcgctt tgtcgcgcag
    15661 tacatcgaga taactcaata ccttcggatg atcgatcccg tcgataggcg gaacgcgcgg
    15721 cacgatccca ctggcgagga tcgtttcatc gaacgcctgt aactgatccg ccgtcacggt
    15781 gtgattgagt ttcagcgtca cgcccgtcac ttcgatcatc cggtggtaat agcgcagcgt
    15841 ttcgtaaaac tcctctttgc cggggatctg tttggcgata ttaaactgcc cgccgctctc
    15901 gctgtgggca tcaaacaatg ttacctgatg cccacgcgcc gccgcgttaa tggcaaacgc
    15961 cagcccagca ggtcccgcac cgaccaccgc cagatttttt ttctgcacgg caggaaggat
    16021 tggcattttg gtttcgtggc aggcgcgagg attcaccagg cacgaggtga ctttgccaac
    16081 gaagatctga tcgaggcagg cctgattgca gccaatgcag gtgttgatct catcggctcg
    16141 ccccgattgc gcttttgaca gcagttccgc atcagcaaga aacggtcgtg ccatcgatac
    16201 catatcggca tcgccgcgcg agagaatatc gtcggcaacc tgcggatcgt taatccggtt
    16261 ggtggttacc agcggcagcg agacgtggcc tttcagtttg cgcgtgaccc agctaaatgc
    16321 gccgcgcggc acgggcgtgg caatggtcgg aatacgtgct tcatgccagc caatgccggt
    16381 gttgataatg gtcgcgcccg ccgcttcaat ggcctgcgcc agctctaccg tttcggcaaa
    16441 agtcccgccg tcttcgacca ggtcgagcat cgacagtcgg tagataataa tgaagtcgtt
    16501 gccgacgcgt tcgcgcaccg cacgcactac ttctacggca aatcgcatcc ggttgcggta
    16561 atcgccgccc cactggtcac tacgctgatt ggtgtgcagc gtcagaaatt cgttgatcaa
    16621 atacccttcg gaccccatta cctctacacc gtcgtatcct gcctcccgtg ccagttgcgc
    16681 gcagtgggcg aaatcgtcga tcagttgcag gatctcttca tgggtgagtt cgtgaggaac
    16741 gaaacggttg atgggggcct gcaatgcgga gggagcgacc agatgcggtt ggtagctgta
    16801 gcgcccggta tgcaaaattt gcagggctat tttgccgcct tcctgatgta ccgcttcggt
    16861 aatggtgcga tggtgtggga tctggctggc gtcgttgagc attgcgccac cttccatgcc
    16921 aacgcctgtt aaatctggtg caatgccgcc gctgacaatc agcgccacgc cgtgacgggc
    16981 gcgttcggca taaaacgctg ccagccgctc ggcaccgtcc gggtattcct ccagcccggt
    17041 gtgcattgag cccatcaaca cgcggttttt taacgtggta aaacctaaat ccagcggggc
    17101 gaacagcgac gggtagctca taaaattgtc cagtatgtaa aataattgtt atgtggtcgg
    17161 atgagttcta atttagccgt cgccggagaa aagggaaaag gggagtgcgg ggtttgtgat
    17221 gggattcaaa aagaatacgc ccggtggtaa cgccggatgc gacgcttgcc gtgttttatc
    17281 cggccaggag gattgcacat gtagggcgga taaggcgttt acgccgcatc cgccagcagt
    17341 tgcaaattat tgcttacgga aaaaatcgtt atacaacata tacaaatgcg cggcactcca
    17401 ggagaaattt ggtgcagcct tgctgcgcgc cagtcagcgg gttgtaattc tcctgaattg
    17461 ggccatcggc ggttaatcct ttggcgtgcc ggaagaacgt atccgccagc ttcagggcat
    17521 catcacgata accgtaacgc tccatccctt tcagagcaaa ccagaactga tccacccata
    17581 cgcgcccgcg ccagtagata tcagcgccaa aagccggatt ggttaacgcc gccgttccca
    17641 gcgggacaaa ggtgttgaac tctttaggat cgagcatcac cttcaccacc gcgtcggcat
    17701 tggcctgcgt tgccgcaccg ttaaacagcg gcgaccagcc ttccggccct ttaccgcgct
    17761 caacaatcgg tttgcccgcg cagccgttcg ccagtggttt atcttcaata cgtacgtcat
    17821 agtagaactg ggtagtcggg tcgaacatac aggtgttgat gtagtccgcg agctgctgtg
    17881 ccaactggcg atagcgtttg gcctcttctg gcttaccgag gatggttgcc atctccgcca
    17941 gataatggtt atcgctgtac atatagctgg cctgatccac cgactcctgc aatagcgagt
    18001 agcccagcaa cgttccgtcc tgactgcggt tttcggcgaa tttcaccgtc cagtcgctac
    18061 gtttgccacc attagcgaca tatttatcca actgttcttt gtcgataaaa ccaaagacgg
    18121 cggcatcatc acgccccgat tcccacgacg cagcgacctg tgccggaatt tccagactgt
    18181 cgtactggcc tttctccacc acgcgggcgt agttgttcag cccagactgc gtctcttctt
    18241 tgttgccttt cttcaccgca aacagcatct cgccgctctc agtgttgtgg gctttgtcgc
    18301 gggtcgcgcc atattccggc acgccgttgc cgttgtgatc gcggttacgt aaccaccagt
    18361 cgtgataggc gaccagtttc gggtacatct ctgccaacca ggctttatcc tgggtgacgt
    18421 tgtacacttc tatcaccgac caggcggcaa ggctgggttt ggtattacgt tcgttccagt
    18481 tgccgccatc gccaccacgc tcggggctaa ggttccacgc tatcaggtcg gggacaaagc
    18541 ccacatcctg cggacgcacg cggtcgccag gctggatctg ccaggagaag accgcgcgga
    18601 tattctcttt ggcgatgtcc ggattgaaat gcgccatcgc aaacgcctgc ttctaggtat
    18661 cccacggcca ggtctgattg ccggagaacc agcgcccggt caccgacggt gtaacggtgt
    18721 taaatttcac cgcaccgccc ggtgagcgcc agttaccgtt gagcgtttcg atcgctttca
    18781 ccgcgacgcg cgtctgttcc ggcgtcgcat ccggattggt taaccctttc ttcaggtatt
    18841 cttcccagcg ttgctgcgag gcggtgagat aaaacgccgg acgcgccaga atatcgcgga
    18901 tctgcatttg ctctttgcta acttcctgag cggtcagcag atgggaatag gtggtgtaga
    18961 gcgtggtcga accgttgata tgcgccttac tggtaaagcg attaccgttg atttcagtct
    19021 gcaccggcag ggatttatgc acctgatatt ccgattcgcc ggaggtcagc agatcccagg
    19081 tggcgcgcac tttgccaaag gtgactttca ggccatcacg ggtggcgctg attttgcgct
    19141 gatagtcagg gtattcgcca gcaatggttt tatcggaaag cggtttccct tctttcgctt
    19201 ccagtttttc cagcagttcg ccgtcccaca ccagatccag cggtttattg ctggtgattt
    19261 tggtttccag tagtgacgtg cgcggcgtgg cgaagcgcag agtcatttcg acttgcacat
    19321 cttttgctgt cagtttttgc accagcgcac cgggaatact gtatgcctcc agcgtaaagt
    19381 cgactttctt gccgtcctgc cagacggtca ggcggtcgaa attgctggcc ataaagttga
    19441 tgtactcttc cgtcagcagc gcaacgcccg gaaagccgcc catggtgtta gggccgtctg
    19501 gcaacagatg accatgccag gctccgagat cgaaaaacgg attaaaacgc tggtgatcgt
    19561 cgtaatcgta atccttcatg tactgcggcg cgccagtacg gttaatcacg tttttataat
    19621 tgtcggcgtt agcggcatgg gcggaaaaac ttatcagcag agcgcaggtt actggcgtta
    19681 aaatagtttt tattttcatg aaattacagt ccttattacc agtagaaata ttgcatcagg
    19741 aagatttggt cgctgggatc gtgagaggca tttttcatgt agaagcggct atcaaaagcc
    19801 gtggcgaaac gtccgccgcc gtattcgtac cagataccaa actgcatgaa agaggtggtt
    19861 tcatcgtcag cgtggtcagg gcgatgtttg gcgtaggtgt aagcggtgga gagataaacg
    19921 ccctttaacg cttcatacat ggcgctcacc atcatcccac tttcacttcc cggtacgtcc
    19981 agcccgtcgg cgcgtccggt atggtgccag gcgcgagcgg caaagttagg agttagcagg
    20041 cccgtgagat agagctgtcc tgtgccgtcg gtgatttcca gaccgttcat ccaggtgatg
    20101 ccttcggcaa ggtcatactg gatgtaaccg ttcatcattg ccggataggt gtatttgtcg
    20161 tcatagcgat cgtatttgcc aaaatgtagc caggctttgc tttcatcatg atgtccggca
    20221 ggagtcgcgg tgacgctata acgaaagttg ccgcttaagt tctgtacctt cagcgcagtc
    20281 ataatgtcgc gggtattggg aatgacgtag cccagatcgg gggtgaaatc gccccaccat
    20341 tgcaggtcat ccagcgagga atcctgacgc agactgagca tgatttcggt gccatcattg
    20401 gtacgataac cgccatagaa acggttaatt ccgccctcga aaccacccca gctatggtct
    20461 ggcac
//
LOCUS       DAJVUK010000068        20117 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.068, whole genome shotgun sequence.
ACCESSION   DAJVUK010000068 DAJVUK010000000
VERSION     DAJVUK010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20117
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.068"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1988
                     /locus_tag="OQQ57_002246"
     CDS             <1..1988
                     /locus_tag="OQQ57_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HCS1956996.1"
                     /translation="GVGAFLAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRD
                     TFNTEQVEVIKGPSGTDYGHSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDV
                     NQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQH
                     NTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHD
                     INDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKIL
                     TNQTNLTSTFYTSSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLT
                     RNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITC
                     PAGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQ
                     SGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQ
                     YGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTL
                     WSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQL
                     NVYNLFDTDYVASINKSGYRYHPGKPRTFLLTANMHF"
     gene            2030..2707
                     /gene="ybiX"
                     /locus_tag="OQQ57_002247"
     CDS             2030..2707
                     /gene="ybiX"
                     /locus_tag="OQQ57_002247"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HCS1956997.1"
                     /translation="MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQ
                     QVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVR
                     SHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCV
                     TPVTRGVRVASFMWIQSMIRDDKKRAMLFELDKNIQSLKSRYGENEEILSLLNLYHNL
                     LREWSEI"
     gene            2781..3047
                     /gene="ybiI"
                     /locus_tag="OQQ57_002248"
     CDS             2781..3047
                     /gene="ybiI"
                     /locus_tag="OQQ57_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HCS1956998.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            3312..3572
                     /locus_tag="OQQ57_002249"
     CDS             3312..3572
                     /locus_tag="OQQ57_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1956999.1"
                     /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
                     ASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSGTAVIYK"
     gene            complement(3800..4885)
                     /gene="hcxB"
                     /locus_tag="OQQ57_002250"
     CDS             complement(3800..4885)
                     /gene="hcxB"
                     /locus_tag="OQQ57_002250"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcXB"
                     /protein_id="HCS1957000.1"
                     /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG
                     HDSHGIGMIPSYVRSWSQGHLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
                     EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF
                     GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
                     VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
                     INPELFGAPDCSAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
                     WQAICDAARQIGMSEETLQAFCQQLAS"
     gene            complement(5026..5988)
                     /gene="ybiB"
                     /locus_tag="OQQ57_002251"
     CDS             complement(5026..5988)
                     /gene="ybiB"
                     /locus_tag="OQQ57_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HCS1957001.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ
                     WIERCLAGSEPIPESLKIQMACCLEATGEAATISDGLARVNQAF"
     gene            complement(6016..8166)
                     /gene="dinG"
                     /locus_tag="OQQ57_002252"
     CDS             complement(6016..8166)
                     /gene="dinG"
                     /locus_tag="OQQ57_002252"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HCS1957002.1"
                     /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGRHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
                     PSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
                     QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            8286..8768
                     /gene="ybiA"
                     /locus_tag="OQQ57_002253"
     CDS             8286..8768
                     /gene="ybiA"
                     /locus_tag="OQQ57_002253"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
                     /protein_id="HCS1957003.1"
                     /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW
                     PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALR
                     AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
                     "
     gene            complement(9000..10364)
                     /gene="rhlE"
                     /locus_tag="OQQ57_002254"
     CDS             complement(9000..10364)
                     /gene="rhlE"
                     /locus_tag="OQQ57_002254"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HCS1957004.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSSDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            10593..11264
                     /gene="cecR"
                     /locus_tag="OQQ57_002255"
     CDS             10593..11264
                     /gene="cecR"
                     /locus_tag="OQQ57_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HCS1957005.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNTTTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA
                     CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            11267..12262
                     /gene="hlyD"
                     /locus_tag="OQQ57_002256"
     CDS             11267..12262
                     /gene="hlyD"
                     /locus_tag="OQQ57_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308900.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HCS1957006.1"
                     /translation="MKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRTV
                     NLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLMLA
                     GYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQAT
                     LKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRA
                     VEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQI
                     GFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGNEAGHE"
     gene            12255..13991
                     /locus_tag="OQQ57_002257"
     CDS             12255..13991
                     /locus_tag="OQQ57_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1957007.1"
                     /translation="MNDAVITLNGLEKRFPGMGKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDSGNATMIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELASEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            13984..15117
                     /locus_tag="OQQ57_002258"
     CDS             13984..15117
                     /locus_tag="OQQ57_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1957008.1"
                     /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            15128..16234
                     /locus_tag="OQQ57_002259"
     CDS             15128..16234
                     /locus_tag="OQQ57_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1957009.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFTRASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIATNYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(16196..16606)
                     /locus_tag="OQQ57_002260"
     CDS             complement(16196..16606)
                     /locus_tag="OQQ57_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhQ family protein"
                     /protein_id="HCS1957010.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            16739..17490
                     /locus_tag="OQQ57_002261"
                     /pseudo
     CDS             16739..17490
                     /locus_tag="OQQ57_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
     gene            17487..18728
                     /gene="clsB"
                     /locus_tag="OQQ57_002262"
     CDS             17487..18728
                     /gene="clsB"
                     /locus_tag="OQQ57_002262"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HCS1957011.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DNVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNKLTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWHPAHTPRLTQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            18728..19684
                     /locus_tag="OQQ57_002263"
                     /pseudo
     CDS             18728..19684
                     /locus_tag="OQQ57_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415309.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
     gene            complement(19720..>20117)
                     /locus_tag="OQQ57_002264"
     CDS             complement(19720..>20117)
                     /locus_tag="OQQ57_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BAX inhibitor (BI)-1/YccA family protein"
                     /protein_id="HCS1957012.1"
                     /translation="IIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVII
                     VNAALMSERPIWVISCLVIVLWPGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALT
                     LYYYFIGFFGILAAIAITLVWQRHTRFFH"
BASE COUNT         4726 a         5447 c         5301 g         4643 t
ORIGIN      
        1 ccggcgtggg tgcgtttttg gcgggtgaga acggtaactc caccactggc gacgccattt
       61 atatgcgtgg tgccgatacc tctaacagta tttatattga tggcattcgc gatatcggca
      121 gcgtctcgcg cgacaccttc aataccgagc aggtcgaagt gattaaaggg ccgtccggca
      181 ccgactacgg gcacagcgca ccgacgggct cgatcaatat gatcagcaaa cagccgcgca
      241 atgattccgg cattgacgcc tccgccagta ttggcagcgc ctggttccgc cgcggcacgc
      301 tggacgtcaa tcaggtcatt ggtgatacca ccgcggtgcg cctgaatgta atgggcgaaa
      361 aaacgcacga tgccggacgc gacaaagtca aaaatgagcg ttacggcgtc gccccttctg
      421 tcgcttttgg ccttggtaca gcgaatcgtt tgtatcttaa ttatctgcat gtcacccagc
      481 acaacacgcc agacggcggc attccgacca tcggtttgcc gggctattct gccccatctg
      541 cgggaacggc ggccctgaat cattccggaa aagttgatac tcataacttt tacggcacgg
      601 attccgatta cgacgattcg accaccgaca ccgccaccat gcgttttgag cacgacatca
      661 acgataacac caccattcgc aatactaccc gttggtcgcg cgtaaagcag gattacctga
      721 tgacggcgat tatgggcggg gcgtcgaata ttactcagcc caccagcgat gtgaatagct
      781 ggacctggtc acgcacggcg aataccaaag atgtgagtaa taaaattctc accaaccaga
      841 ccaacctgac ctcgacgttc tataccagtt ctatcggtca tgatgtcagt accggcgtgg
      901 aatttacccg tgaaacgcag actaactacg gcgttaatcc ggtgacgtta cccgcggtaa
      961 atatttatca tcctgacagc agcattcatc ccggcggcct gacgcgcaac ggcgcaaacg
     1021 ccaatggtca gacggatacc ttcgcaattt acgcctttga tacgctgcaa atcacccgtg
     1081 attttgagct gaacggcggg atccgtctgg ataattatca tactgaatat gacagtgcca
     1141 ccgcctgcgg cggcagcgga cgcggtgcca tcacctgccc agctggtgtg gcaaaaggtt
     1201 ctccggtcac caccgtcgac accgccaagt cgggcaatct ggtgaactgg aaagccgggg
     1261 cgctgtatca cctgacggaa aacggtaatg tctatattaa ctatgccgtt tcccagcagc
     1321 ctccgggcgg caacaacttc gcccttgcgc agtctggcag cggtaacagt gccaaccgca
     1381 cagattttaa accgcaaaaa gccaacacca gcgagattgg caccaaatgg caggttctgg
     1441 ataaacgcct gttgctcacc gccgcactgt tccgtactga tatcgaaaat gaagttgagc
     1501 aaaatgatga cggaacttac tcgcaatacg gtaagaaacg tgtcgaaggc tatgagatat
     1561 ccgtggccgg gaatatcact cccgcgtggc aggtgattgg cggctatacc cagcaaaaag
     1621 caaccatcaa aaacggcaaa gatgttgccc aggatggttc ctcatcgctg ccgtataccc
     1681 cggagcacgc cttcacctta tggagccagt atcaggcaac cgatgatatc tctgttggcg
     1741 cgggcgcacg ctatatcggc agtatgcata aaggttcaga cggcgcggtg ggaacgccag
     1801 cgtttaccga aggttactgg gtcgccgatg ccaaactggg gtatcgggtt aatcgcaatc
     1861 tcgacttcca gctaaacgtt tacaacctgt ttgataccga ttacgtcgcc tcaatcaaca
     1921 agagcggcta ccgttatcac ccgggcaagc caagaacctt cttgctcaca gccaatatgc
     1981 atttctgatt cagatgtggg gcgcaggccc cactttttgg agaaattgta tgatgtacca
     2041 cattcccggc gtgttatcgc cacaggacgt cgctcgtttt cgcgaacaac tggaacaagc
     2101 cgaatgggtg gatggacgcg tcaccaccgg cgcacaaggt gcgcaagtta agaacaatca
     2161 acaggtagac acccgcagca cgttatacgc cgccctgcaa aatgaggtgc tgaacgcggt
     2221 taaccaacat gctttattct ttgccgcggc cttgccgcgt accctttcca cgccgctgtt
     2281 taatcgctat cagaacaatg aaacctatgg ttttcatgtg gatggcgcag tacgcagcca
     2341 tccacaaaac ggctggatgc gcactgacct ttctgccacg ctgtttttaa gcgatccaca
     2401 aagctacgac ggcggcgaac tggtcgttaa tgacaccttc ggacaacatc gggtaaaact
     2461 cccggcaggt gatctcgtgt tgtatccctc cagcagcctg cattgcgtga cacccgtaac
     2521 ccgcggcgta cgagtggcat catttatgtg gatccagtcg atgatccgcg atgataaaaa
     2581 gcgcgccatg ctgtttgaac tagacaaaaa tattcagtcg ctgaaaagcc gctatggtga
     2641 aaatgaagag atcctgtcgc tgctcaatct ttatcataat ctgctgcggg aatggtcgga
     2701 gatctgacgc ttgaactgcc caggttcgtc cctatattag ctacacttaa ctgtacaagc
     2761 attgatatgg ggaggacgat atggcatccg gttgggctaa cgatgacgcc gtcaacgaac
     2821 agatcaacag tacaattgaa gatgcgattg cccgcgctcg gggtgaaatt ccgcgtggcg
     2881 aaagcctgta tgaatgtgaa gagtgcggtg cccccatccc gcaagctcgt cgggaagcca
     2941 ttcctggcgt gcgcttatgt attcattgtc agcaggagaa agatttacaa aaaccagcgt
     3001 atacaggata taatcgcaga ggttcgaaag acagccagtt acgttaacta caactggcga
     3061 gatgcatagc gagtataatt tgtattttgc gtggcattcc gtgcctttaa cgctgctgtg
     3121 actgccacgc ggcataaaac aagtccataa gtacaacaaa taaatggttt atcagtatgt
     3181 tagatgtcaa tcaatttatt tgaacaaggc ggtcaattct cttcgatttt atctctcgaa
     3241 aaaaaacgtg atactcatca catcgacgaa acaacgtcac ttatacaaaa atcacctgcg
     3301 agagattaat tatgaaaact atcaatactg ttgttgctgc tatggctctt tcaactctat
     3361 catttggcgt gttcgcggcg gaaccggtaa cggcatccca ggcacagaac atgaataaaa
     3421 tcggcgtggt ttctgccgat ggcgcatcca ccctcgatgc cctggaagcg aaactgactg
     3481 agaaagccgc ggcagccggt gccagtggat acagcatcac ttctgccacc aacaacaata
     3541 aattaagcgg tactgcggta atttataagt aattcgtagg acggataagg cgtttacgcc
     3601 gcatccggca acagatgcct gatgcgacgc taccgcgtct tatcaggcct acaaaatccg
     3661 aaccgttgga cggatcaggc ggttacgcta cgtccagcac aagtatttcc ctgtctgttt
     3721 gccgacagac gcatatgctc taaccctcat tgatcctata ttacccttgt ttgcccgtcc
     3781 gttactggac gggctttttt tagctggcta actgctgaca gaaagcctgc aacgtctctt
     3841 ccgacatacc aatctgccgc gccgcatcac aaatggcctg ccagcttccc gcatccaatg
     3901 gaatcccctg ctcctgccgt tcgcgacgcg tgttcacttc ccactcgccc ggtagcaaaa
     3961 tcggcttatc gtcatcatgc ggcgaggctt tcacccactc ggcaaaggct tcagtctgcg
     4021 cgctacaatc cggcgcgccg aacagttccg ggttgatgat gatagtggtc atgcagttaa
     4081 gaatggcatc gggactggtt tgtaacgttt cctgatgcgt cgttttaccg ccagaaagcg
     4141 ccccgccaag aatttcacac atcgctgcaa gggcgtagcc tttatgttcg gcaaaggtca
     4201 acagcgaccc caacggcgac tcctgcatta ccgccggatt ggtcgtcggc acgccgttaa
     4261 cgtcaatcag gcaacctggc ggcacgggga cgcctttatg ccaggcgacg cgagttttac
     4321 caaatgcgat ggcgctggtg gcgtaatcaa gcaacagcgg gaaattatct ttacgaggga
     4381 aaaccacaca gaacggattg gtgccaaagc ggctgtcgcg accgtggaac ggtgcgacca
     4441 ttggaatacc gaccacgcta acaaagtgga tagagacaaa ccccgccgct gcacactgct
     4501 ccgcccagta accgatacgg ccgatatgat gcgagttatg tagcgccacg gcagcaatac
     4561 cgtgctgatg cgctttctca atccccagcg ccatcgcttc gtgtgccgcg acctgaccga
     4621 atgcgcgatc gccatcgagc gtgactgccg cccccgcctc tttaacgatt ttggcatgat
     4681 ggttaatttg cagatgcccc tgactccagg aacgcacata gcttgggatc atgccaatac
     4741 catgagaatc atgccctgcc aggtttgccg cgattaaatg atcggccact aatttcgctt
     4801 cttgttcctc gctacccatc tgacgaaata cagcctgaat aaaactgtgc agcgtctgag
     4861 catcaaagcg atgaccactt tccatggtta actcctgttt atgttatgtg tttgttgttt
     4921 ttttatgctg cacgccgggc gcgggaaggt caataaagat gcaggaattt catattgcgg
     4981 tggggtaaaa gccggatgac atggctcatc cggctgagaa aagaattaaa atgcctgatt
     5041 aacgcgcgcc aggccgtcgc tgatagttgc cgcttcaccc gtagcctcca ggcagcaagc
     5101 catctggatt ttcagcgatt cgggaatcgg ttcgctgcca gcaaggcaac gctcaatcca
     5161 ctgcgccgtg gtttctgggt cttttgcttg tggcagtaac tcgctaccag cagtgtcctg
     5221 tttttcatac agcacccgca tcccttcacg gtcaatgaga ttgatctgcg ggcagcgctg
     5281 cggattagca tacacttcgc cttcagtacc atgcattagt agcgcccgcc cgccgatatc
     5341 gctaaagaac ttcgcgactc gcccgatgta ttccggatgc gaaacgctgg aaagacgcag
     5401 cgcctcacct tcggcaaatg gcgtcgccag tttcgccagg gtatgtgcac tgttacgcac
     5461 gcccatccgc cagcgcatcg ccagttgttt ttccagcggc gggcaaaacg cgccgacagg
     5521 cataaacacc ggttgatgtt cgtcgagctt cgcctgcgcc tgcccgccgt gcaacgttgg
     5581 tgtaataccc atcagttcga aaatggtttc tgtcagcacg cgagttggat cttcgctaac
     5641 cccgtgaacc accacaggaa aaccgagttt gtgcaggaga atagccaaca acggcgtcag
     5701 gttggcctgt ttacgcgcgc cgttgtaact ggggatgaca atcggcatcg gcttgcctgc
     5761 aggcggcgtc agcttgatgg tgtgattttg catggcttcg taaaagccga gcatctctgc
     5821 ttccccttcc cctttgatac gtagcgcaat caatacgccg cccaactcaa ggtcagggac
     5881 ttcaccattg agcatatggg catacagacc gcgcgcagta tcccggtcta aatcgcgcgc
     5941 gtggtttttc ccgcgcccga tctctttaat gattttgcga tagtccattt acgactcctt
     6001 acctgactca catcattaac gccgccgacg gcgtggggat ttcgtttttt ctttcttttt
     6061 aactatacct tcagggactt ccggttgctc tatcggaaat accggtaatg catccagtag
     6121 tcgcttgcca taatttttgg tcagcaagcg tttgtcgtag ataaccactt cgccccagca
     6181 accgtggctt cgaatcagtc gcccaacctg ctgaatcagg ttaaacgagg cgctcggcag
     6241 gctttgcacc tcaaacggat agcggttgag gcttttcagc cattcccctt cggtgatcac
     6301 caccgggctg tcgatgggcg gaaaagcgat tttgtggata tgcacctggc tgagcagatc
     6361 acctttcaaa tcaagccctt cggcaaatga ctgtaagccc accagcacac tacgctcacc
     6421 gttggcaacg cgtttgcggt gcagttcaac taagcgataa cgcggctgat cgccctgcac
     6481 cagcagcatc aggcgtaaat ccgtcacata gtcgagaaag cgctgcatcg cccgtccgct
     6541 ggcaaacagt accaacatac cgagatgttt tttgctctcc acctgctcac ggaaaaaggc
     6601 cgccatttcg gcaatatgct gctcttcgtt gtcgatggaa ggctcaaagc gcatccgggg
     6661 aataacaatt ttgccctgtt cgcagtggtt aaagggggaa tccagcgcca caaaacggtc
     6721 gcccgctttc tctttcagcc cgctcatctc ctgcaaacgc gaaaaactgt tcagcgaacg
     6781 caaggttgcg gaggtgacaa taatgtgcgg aatactgcgc cacagcagcc tttccagctg
     6841 atcgctgaca cgtattccca cgcagtgaaa ccagagatgc agctgccctt cgcgctcttc
     6901 ccgcgtcgcc catttggtca ccggcgcacc ggaagattgc gccagagacg ccagccgcca
     6961 gagtttgctt tgcgcctcga acatccccaa cgcgcggttc atctgcaaaa tcaaccgatg
     7021 cagacgcaca atatcgtggc ggccggtttt ctcacttaaa tcgttaagaa ataactccgc
     7081 cagaccacgc agcatctcgg tgagttttgc cagccgctgg cagatctcca gcacttcatc
     7141 aggcagttcg cccatcgcaa aacggtgctc tgcctcctgc ccggcaggca tgtagagatt
     7201 gagaatgttg tttaacgagg cgataagctc atacaactct tcacaatgcg cattcaaacg
     7261 ttcagggatc gccagcggtg ggatggtctt cgggcgaaac tgctccatgc aggtagcgac
     7321 cagtttcgtg aacaagtcca gctgtagtcg ataccagggc gcggtgattt cagcgctcat
     7381 ctccagcgca tcccgggcca catctggcag gtgatgacct tcgtccagca ccagcagcag
     7441 atttttcggg tcaggcagta cggcttcgct ttccatcgcc gccatcacca gcgcatggtt
     7501 tgccaccacc acttccgctt cctgaatctc ccgacgagca acaaaaaacg ggcattcacg
     7561 atagtagtaa cagttacggt taaggcagct ggctttgtcg gtactcaaac gacgccagag
     7621 atcatcatct atagcgatat ccgtatgatc gcgcagacca tcccatttat aagtgtcgag
     7681 atcgcccttc agcttcgcac aacgtttttg ctcttcctga ttatttggcg tcagttcgtc
     7741 gtcaagaaac gccagcagat cctgttgcgt gggttcagtg ctggcgagcg ccgtcagatt
     7801 acgcggacaa acgtagcgcc cacgcccgaa agcggcagtg aatttaagat cgggaatgat
     7861 ctttttcagc agcggtaaat ctttgctgta aatctgatcc tgcaacgcca cgttggcggt
     7921 actcaccacc agcgtttttt gctcttcgcg ggcaatggcg atgccgggga tcaaatagga
     7981 gagcgttttc ccaacgccgg tgggggcttc aatcgccaga tgccgccctt cttctccggc
     8041 cagcgttttg gcgacgtccg caatcatctg ccgctgcggc gcacggggaa taaagtcggg
     8101 gatctgttcc tgaagcgcct tataccaggc ggcaatttgc gctttaagcg cggcggttaa
     8161 tgccatgaga aaacctgaaa tactgtataa acagccaata ttgtggcatt tttcggtttt
     8221 caggggtaat ggtttttctg tttctggaaa gcggctcgca ataaccacca acataatgcg
     8281 gtttaatgcc cgttcgagca caaaggatcc aacacgtcat gcaagacacc atcataaatt
     8341 tctacagcac cagcgatgac tacggtgatt tttctaactt tgccgcctgg cccatcaagg
     8401 ttgacgggaa aacctggccc acctccgaac actattttca ggcacaaaaa ttccttgatg
     8461 aaaaataccg cgaagagatc cgtcgggttt cttcccccat ggtcgccgct cgcatggggc
     8521 gtaatcgttc caagccactt cgtaaaaact gggagtcggt taaagaacag gtgatgcgta
     8581 aagcacttcg tgctaaattc gaacagcatg cagaactgcg tgcgctcttg ctggcaaccg
     8641 cgcccgcaaa actggttgag catacggaaa acgatgctta ctggggagac ggtggtaatg
     8701 gtaagggcaa gaatcgactg ggctaccttt taatggagtt gcgcgaacaa ttggctatag
     8761 agaagtaacg tctcggtggc ttatgggcgg taaaacagat aaattttttc ccgtgttctc
     8821 aaattgctga caagtgcttg ttgtgaaatg ccggatgcgg cgtaaacgcc ttatccggcc
     8881 tacaaaagca tgcaaattca atatattgca gagttaacgt aggcctgata agcgtagcgc
     8941 atcaggcagt tttgcgtttg ttcatcagcc tgatgccggg catagcccgg cataaaagat
     9001 tactgcgcag cggcaggttt acgcggacgg cggcgacgtt gttgttcgcc tgccggtttg
     9061 gcatcgccga ggcggcgaga cggtttttct gcaggtttcg cgcttgcaga ttttgcgcca
     9121 ccttccccac ggcgtggttg ctgttgaccg cgaccaccac cttgcccacg accgccgccg
     9181 ccacgttgct ggcgaccgtt ctggatcggt tcggctttga ttgacgggtc cggctcatag
     9241 cccggaatcg caatgcgcgg gatctctttt ttcagcagtt tttcgatatc acgcagcagt
     9301 ttgtgttcat caacacacac cagcgacaac gcttcaccgg tagcagccgc acgaccggta
     9361 cgcccgatac ggtggacata atcttccggt acgtttggca gttcatagtt gacgacgtgc
     9421 ggcaactctt cgatatccag accgcgcgca gcgatatcgg tcgccaccag tacgcgaatg
     9481 tcactcgatt taaaatcagc cagcgcacgg gtacgcgcac cttgcgattt attcccgtgg
     9541 atcgccgcac tacggatgcc atctttattg agctgctcag ccagatggtt agcgccgtgt
     9601 ttggtacggg taaacaccag cacctgctgc cagttccctt taccaatcat gtgcgacagc
     9661 aattcgcgtt tgcgtttctt atcgacaaag tgaacgtgct gggtcacctg atcagacgcg
     9721 gtattgcggc gtgccacttc gatttccagc gggttgtgca acagtttttc cgccagggct
     9781 ttaatatcgt cagagaaggt cgcagagaac agcaggttct ggcgtttcgc tggcagtttt
     9841 gttaacacgc gacggatatc gtggataaag cccatgtcga gcatgcggtc agcttcatcg
     9901 aggacgagga tttcaacctg atccagcttc actgcatttt gatgttccag gtccagcaaa
     9961 cgtcccggtg ttgccaccag aacatcaacg ccgccgcgca gcttcatcat ttgcgggtta
    10021 atgctgacac cgccaaacac caccagcgaa cgaatgttca aatatttgct gtaatcacgg
    10081 acgttttcgc caatctgcgc agccagttca cgggtcgggg taagaatgag cgcacgtacc
    10141 ggacgacgcc ctttggcgtg cggctggcga gtgatcaggt gttgcaacag cggcagcgta
    10201 aagcccgctg ttttaccggt accggtctgg gcgctagcca tcaggtcgcg gccttccagc
    10261 accgcaggga tcgcctgctg ctgaataggg gtgggttcac ggtaaccctg ctcggcaacg
    10321 gcgcgcagga tatcagggct taaacccaaa gaatcgaaag acataactac tccgaaccgc
    10381 cccgaccgtt accggtgtag ttttcaggga gatactgaaa aggaaaatga caaaaaccac
    10441 aatgtcatga gggagcggag tgtagcagtt tttgtgacgc agcgcataaa ttatccctgt
    10501 gactggcgtt gctaaaattc ttagccatac tggacaactc ccctatggag tcataatctt
    10561 aatcaatcat ttgattaaga atggactgtg cgatgaataa tcctgccatg acaatcaagg
    10621 gtgaacaggc gaaaaaacag ctgattgctg ccgcactggc gcagtttggt gaatatggaa
    10681 tgaacaccac cactcgcgag atagccgccc aggccgggca gaatatcgct gccatcacct
    10741 actacttcgg ttcgaaagaa gatttgtacc tcgcctgcgc ccagtggatt gccgatttta
    10801 ttggcgagca gttccgtccg catgccgagg aagccgaacg cttgttcgcg caaccacagc
    10861 ctgatcgggc tgccatccgt gaactgatcc ttcgcgcctg caggaacatg attaagctgc
    10921 tcacccagga tgacaccgtc aacctcagca agtttatctc ccgtgagcag ctctctccca
    10981 cggcagccta ccacctggtg cacgaacagg tgattagtcc gctacacagc cacctgacac
    11041 gcctgattgc cgcctggacc ggctgcgacg ccaatgacac ccgcatgatc cttcataccc
    11101 atgcgttgat tggtgagatt ctggcgttcc gtcttggcaa agaaacaatt ctgttacgta
    11161 ccggctggac cgcgttcgat gaagaaaaga ccgaactgat caaccagacg gtgacctgtc
    11221 atatcgacct gattttgcaa ggattatcgc aaaggagttt gtagtgatga aaaaacctgt
    11281 cgtgatcgga ctggcggtag tggtacttgc cgccgtggtt gccggaggct actggtggta
    11341 tcaaagccgc caggataacg gcctgaagct gtatggcaac gtggatattc gtacggtgaa
    11401 tcttagtttc cgtgttgggg ggcgcgttga atcgctggcg gtggacgaag gtgatgcgat
    11461 caaagcgggc caggtgctgg gcgaactgga tcacaagccg tatgagattg ccctgatgca
    11521 ggtgaaagcg ggcgtctcgg tggcacaggc gcagtatgac ctgatgcttg ccgggtatcg
    11581 cgatgaagaa atcgctcagg ccgccgcagc ggtgaaacag gcgcaagccg cctatgacta
    11641 tgcgcagaac ttctataacc gccagcaagg actgtggaaa agccgcacca tttcggcaaa
    11701 tgacctggaa aatgcccgct cctcgcgcga ccaggcacag gcaacgctga aatcagcaca
    11761 ggataaattg cgtcagtacc gttccggtaa ccgtgaacag gacatcgctc aggcgaaagc
    11821 cagcctcgaa caggcgcagg cgcaactggc gcaggcggag ctgaatttac aggactcaac
    11881 gttgatagca ccgtctgatg gcacactgtt aacgcgcgcg gtggagccag gcacggttct
    11941 caatgaaggt ggcacggtgt ttaccgtttc actaacgcgt ccggtgtggg tgcgcgctta
    12001 tgttgatgaa cggaatcttg accaggccca gccggggcgc aaagtgctgc tttataccga
    12061 tggtcgcccg gacaagccgt atcacgggca gattggtttc gtttcgccga ctgctgaatt
    12121 taccccgaaa accgtcgaaa caccggatct gcgtaccgac ctcgtctatc gcctgcgtat
    12181 tgtggtgacc gacgccgatg atgcgttacg ccagggaatg ccggtgacgg tgcaattcgg
    12241 taacgaggca ggacatgaat gatgccgtta tcacgctgaa cggcctggaa aaacgctttc
    12301 cgggcatggg caagcccgcc gtcgcgccgc tcgattgtac cattcacgcc ggttatgtga
    12361 cggggctggt ggggccggat ggtgcaggta aaaccacgct aatgcggatg ctggcgggat
    12421 tactgaaacc cgacagcggc aatgccacga tgattggctt tgatccaatc aaaaacgacg
    12481 gcgcgctgca cgccgtgctc ggctatatgc cgcagaaatt tggtctgtat gaagatctca
    12541 cggtgatgga gaacctcaat ctgtacgcgg atttgcgcag cgtcaccggc gaggcacgta
    12601 agcaaacttt tgctcgcctg ctggagttta cgtctcttgg gccgtttacc ggacgcctgg
    12661 cgggcaagct ctccggtggg atgaaacaaa aactcggtct ggcctgtacc ctggtgggcg
    12721 aaccgaaagt gttgctgctc gatgaacccg gcgtcggcgt tgaccctatc tcacggcgcg
    12781 aactgtggca gatggtgcat gagctggcaa gcgaagggat gttaatcctc tggagtacct
    12841 cgtatctcga cgaagccgag cagtgccgtg acgtgttact gatgaatgaa ggcgagttgc
    12901 tgtatcaggg ggaaccaaaa gccctgacac aaaccatggc cggacgcagc tttctgatga
    12961 ccagtccaca cgagggcaac cgcaaactgt tgcaacgcgc cttgaaactg ccacaggtca
    13021 gcgacggcat gattcagggg aaatcggtac gtctgatcct caaaaaagag gccacaccag
    13081 acgatattcg ccatgccgac gggatgccgg aaatcaacat caacgaaact acgccgcgtt
    13141 ttgaagatgc atttattgat ttgctgggtg gtgccggaac ctcagaatcg ccgctgggtg
    13201 caatattgca tacggtagaa ggcacacccg gcgagacggt gatcgaagcg aaagaactga
    13261 ccaagaaatt tggtgatttt gccgccaccg atcacgtcaa ctttgccgtt aaacgtgggg
    13321 agatttttgg tttgctgggg ccaaacggcg cgggtaaatc gaccaccttt aagatgatgt
    13381 gcggtttgct ggtgccgact tccggccagg cgctggtgct ggggatggat ctgaaagaga
    13441 gttccggtaa agcgcgccag catctcggct atatggcgca aaaattttcg ctctacggca
    13501 acctgacggt cgaacagaat ttacgctttt tctctggtgt gtatggctta cgcggtcggg
    13561 cgcagaacga aaaaatctcc cgtatgagcg aggcatttgg cctgaaaagt atcgcctccc
    13621 acgcgaccga tgaactgcca ttaggtttta aacagcggct ggcgctggcc tgttcgctga
    13681 tgcatgaacc ggacattctg tttctcgacg aaccaacgtc cggcgttgat cccctcaccc
    13741 gccgcgaatt ttggctgcat atcaacagca tggtagagaa aggcgtcacg gtgatggtca
    13801 ccactcactt tatggatgaa gcagaatatt gcgaccgcat cggcctggtg taccgtggga
    13861 aattaattgc cagcggcacg ccggatgatt tgaaagcgca gtcggccaac gacgagcaac
    13921 ccgatcccac catggagcaa gcctttattc agttgatcca cgactgggat aaggagcata
    13981 gcaatgagta acccgatcct gtcctggcgt cgcgtacggg cgctgtgcgt taaagagacg
    14041 cggcagatcg ttcgcgatcc gagtagctgg ctgattgcgg tagtgatccc gctgctactg
    14101 ctgtttattt ttggttacgg cattaacctc gactccagca agctgcgggt cgggatttta
    14161 ctggaacagc gtagcgaagc ggcgctggat ttcacccaca ccatgaccgg ttcgccctac
    14221 atcgacgcca ccatcagcga taaccgtcag gaactgatcg ccaaaatgca ggcggggaaa
    14281 attcgcggtc tggtggttat tccggtggat tttgcggaac agatggagcg cgccaacgcc
    14341 accgcaccga ttcaggtgat caccgacggc agtgagccga ataccgctaa ctttgtacag
    14401 gggtatgtcg aagggatctg gcagatctgg caaatgcagc gagcggagga caacgggcag
    14461 acttttgaac cgcttattga tgtacaaacc cgctactggt ttaacccggc ggcgattagc
    14521 cagcacttca ttatccccgg tgcggtgacc attatcatga cggtcatcgg cgcgattctc
    14581 acctcgctgg tggtggcgcg agaatgggaa cgcggcacca tggaggctct gctctctacg
    14641 gagattaccc gcacggaact gctgctgtgt aagctgatcc cttattactt tctcgggatg
    14701 ctggcgatgt tgctgtgtat gctggtgtca gtgtttattc tcggcgtgcc gtatcgcggg
    14761 tcgctgctga ttctgttttt tatctccagc ctgtttttac tcagtaccct agggatgggg
    14821 ctgctgattt ccacgattac ccgcaaccag ttcaatgccg ctcaggtcgc cctgaacgcc
    14881 gcttttctgc cgtcgattat gctttccggc tttatttttc agatcgacag tatgcccgcg
    14941 gtgatccgcg cggtgacgta cattattccc gctcgttatt tcgtcagcac cctgcaaagc
    15001 ctgttcctcg ccgggaatat tccagtggtg ctggtggtaa acgtgctgtt tttgatcgct
    15061 tcggcggtga tgtttatcgg cctgacgtgg ctgaaaacca aacgtcggct ggattaggga
    15121 gaagagcatg tttcatcgct tatggacgtt aatccgcaaa gagttgcagt cgctgctgcg
    15181 cgaaccgcaa acccgcgcga ttctgatttt acctgtgctt attcaggtga ttctgttccc
    15241 gttcgccgcc acgctggaag tgactaacgc caccatcgcc atctacgatg aagataacgg
    15301 cgagcattcg gtggagctga cccaacgttt tacccgcgcc agcgccttta ctcatgtgct
    15361 gctgctgaaa agcccacagg agatccgccc aaccatcgac acacaaaagg cgttactcct
    15421 ggtgcgtttc ccggctgact tctcgcgcaa actggatacc ttccagaccg cgccgttgca
    15481 gttgatcctc gacgggcgta actccaacag tgcgcaaatt gccaccaact acctgcaaca
    15541 gatcgtcaaa aattatcagc aggaactgct ggaaggaaaa ccgaaaccta acaacagcga
    15601 gctggtggta cgcaactggt ataacccgaa tctcgactac aaatggtttg tggtgccgtc
    15661 actgatcgcc atgatcacca ctatcggcgt aatgatcgtc acttcacttt ccgtcgcccg
    15721 cgaacgtgaa caaggtacgc tcgatcagct actggtttcg ccgctcacca cctggcagat
    15781 cttcatcggc aaagccgtac cggcgttaat tgtcgccacc ttccaggcca ccattgtgct
    15841 ggcgattggt atctgggcgt atcaaatccc cttcgccgga tcgctggcgc tgttctactt
    15901 tacgatggtg atttacggtt tatcgctggt gggattcggt ctgttgattt catcactctg
    15961 ctcgacacaa cagcaggcgt ttatcggcgt gtttgtcttt atgatgcccg ccattctcct
    16021 ttccggttac gtttcgccgg tggaaaacat gccagtatgg ctgcaaaacc tgacgtggat
    16081 taaccctatt cgccacttta cggacattac caagcagatt tatttgaagg atgcgagtct
    16141 ggatattgtg tggaatagtt tgtggccgct actggtgata acggccacga cagggtcagc
    16201 ggcgtacgcg atgtttagac gtaaggtgat gtaacttctt atctttcgcc agcaaagaca
    16261 ctaccgccgg gccggcaagg attgccagcc ctgcaattgc cagcaaaaag ttgttttcca
    16321 gtacgcggga caacagccac agcacaatca gcgctgcgcc aaaataccag gtcgtggtca
    16381 gctcttccaa cacgtctgcc acctcacgcc agcgttgctc ggggtggcgc tgaaacacca
    16441 acatcatcac taccgtgaca caatacagtg cgcataatcc cacgccgacg tgaaccagag
    16501 tcttactcat ccagcccacc accagcagcg ccactaccag taaatgcaac ataatctgcc
    16561 agcaacttag acccgttgcg acacgaacac gttgttgcca cttcatggct tctctcctga
    16621 agaatttatc tctacttact cagagtaccg aactttacgg aaaattccgt aagaccgcac
    16681 ctttttgtga cgccgactac actatttcaa tgagataaga ggcaaagaca ggaaaattat
    16741 gcccgatcaa acacaacaat tttcgttcaa ggtgctcacc atcaacattc aaaaaggttt
    16801 taccgcgttt aaccgacgct tcattttgcc ggaacttcgc gacgcggtgc gtaccgtcag
    16861 cgccgatatt gtttgcctgc aggaagtgat gggcgcgcac gaagttcatc cgctgcatgt
    16921 ggaaaactgg cccgatacct cgcactacga gtttctcgcc gacactatgt ggagcgattt
    16981 tgcctacggt cgcaatgccg tatacccgga agggcatcac ggcaacgccg tactgtcgcg
    17041 ttatcccatt gaacattatg agaatcgcga tgtttcggtc gatggtgcgg aaaagcgcgg
    17101 cgtgctctac tgccgcattg tgccgccgat gaccggaaaa gcgattcatg tgatgtgcgt
    17161 acatctgggc ctgcgtgagg cgcaccgtca ggcgcagctt gcgatggggt gaatgagcta
    17221 ccggacggcg aaccggtatt ggtggcgggt gatttcaatg actggcggca aaaagctaat
    17281 catccgttaa aagtgcaggc cggactggat gagattttta cccgcgccca cggacgcccg
    17341 gcgcgcacgt ttccggtgca atttcctcta ctacgactgg acaggatcta cgtcaaaaat
    17401 gccagcgcca gcgcgccaac cgcgttgccg ctgcggacat ggcgacacct ttctgatcat
    17461 gcccctttaa gtgcggagat tcatttatga aatgtagctg gcgcgaaggc aataagatcc
    17521 agttgctgga aaacggcgag caatattatc ccgcggtgtt taaggcgatt ggcgaggcac
    17581 aagaacgcat cattcttgaa acgtttatct ggtttgagga taacgtcggc aaacagctgc
    17641 atgcggcact actggcagca gcgcaacgcg gagttaaagc ggaagtcttg ctggatggct
    17701 acggttcgcc ggatctcagc gatgagtttg tcaataaact gacggcagct ggcgtagtgt
    17761 tccgctacta cgatccccgc cctcgccttt ttggtatgcg caccaatgtg tttcgccgga
    17821 tgcatcgcaa aattgtggtg atcgacgcgc gtatcgcctt tattggcggg ctgaattact
    17881 ccgccgagca tatgtccagc tacggtccag aggctaaaca ggattacgcg gtacgccttg
    17941 aagggccgat tgtcgaagat attctccagt ttgagctgga aaacctgcct ggacagagcg
    18001 cggcacggcg ctggtggcga cgtcatcaca aagcggaaga gaaccgccag ccgggagaag
    18061 cgcaggtatt gctggtctgg cgcgataacg aagaacatcg cgatgatatt gaacgccatt
    18121 atctgaaaat gctcactcag gcgcggcggg aagtgattat cgccaacgcc tacttcttcc
    18181 ccggctatcg atttttacac gccttgcgta aagcggcacg gcgcggggtg cggatcaaac
    18241 tgatcattca gggcgaaccg gatatgccga ttgtcagagt cggtgcgcgc ttgctgtata
    18301 actatctggt taaaggcggc gttcaggttt ttgagtaccg ccgccgcccg ctccacggca
    18361 aagtggcatt gatggacgat cactgggcga cagtagggtc cagtaatctc gatccgctca
    18421 gtttgtcact gaatctcgaa gcaaatgtca tcatccacga tcgtcatttt aaccagacgc
    18481 tgcgcgataa tctgaacggc attattgccg cagattgtca gcaggtggat gaaaccatgc
    18541 tgcccaaacg cacctggtgg aacctgacca aaagcgtgct ggcgttccac tttttacgcc
    18601 acttcccggc gctggttggc tggcatccgg cacacacacc acgtctgacg caggttgatc
    18661 cccccgcaca accgacaatg gaaacgcagg atcgggtaga aactgaaaac acgggggtaa
    18721 aaccctgatg agtaaatcac acccgcgcta gcgcttagca aagaagatcc tcacctggct
    18781 gttttttatc gcggtgattg tgttgctggt ggtctacgcc aaaaaagtgg actgggaaga
    18841 ggtctggaag gtcatccgcg actacaatcg cgttgcgctg cttagtgcgg tcgggctggt
    18901 ggtcgtcagc tatctgattt acggctgcta tgacctgctc gcccgctttt actgcggtca
    18961 caaactggcg aagcgccagg tgatgctggt gtcgtttatc tgctacgcct tcaacctgac
    19021 gctcagtacc tgggtcggcg gcattggtat gcgctatcgt ttgtactccc gactagggtt
    19081 accgggcagc actattacgc ggattttctc gctcagtatt accaccaact ggctgggcta
    19141 tattttactg gcagggatta tctttaccgc aggcgtggtg gagttgccgg atcactggta
    19201 tgtcgctcaa actacgctgc gtattctcgg cattggctta ctgatgatta tcgcggttta
    19261 tttgtggttt tgcgctttcg cgaagcaccg ccatatgacc atcaaagggc aaaagctggt
    19321 gctgccttca tggaaattcg ccctcactca gatgctgatt tccagcgtta actggatggt
    19381 aatgggggcg attatctggc tgttacttgg tcaaagcgtg aactatttct ttgtactggg
    19441 cgtgttactg gttagtagta ttgctggcgt catcgtgcat attccggcgg ggatcggtgt
    19501 gctggaagcg gtgtttatcg cactactggc tggggagcat acctcgaaag ggagcattat
    19561 cgccgcgctg ctcgcttatc gcgtcctgta ttactttatc ccgctgctgc tggcgctgat
    19621 ctgttacctg ctactggaaa gccaggcgaa gaagctacgg gcgaaaaatg aagcggcgat
    19681 gtgaaattta gttaagttct ttagtatctg cattcacgac taatgaaaaa aacgcgtatg
    19741 cctttgccag acaagcgtta tagctatcgc ggcaagtatc ccaaagaagc cgataaaata
    19801 gtaatagagt gttaatgcac ctgtaaaagc gcaacgaacc ggactccaca actcttcact
    19861 atggcatttt cctgccagtt caaggagctt atttcgtcca tgcgagataa tgcctggcca
    19921 taacacaatc actaagcaac ttattaccca aatgggccgt tcactcatta atgccgcatt
    19981 cacgatgatt accagggcca accctgtcaa cgtcatcata atgataaaac ggtgagaacc
    20041 aggatcaaca ttaaataata aaccggccag catactgatt aaaaacatcg cgcccgcagt
    20101 gctgaacaca atgataa
//
LOCUS       DAJVUK010000069        20045 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.069, whole genome shotgun sequence.
ACCESSION   DAJVUK010000069 DAJVUK010000000
VERSION     DAJVUK010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20045
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.069"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            37..891
                     /locus_tag="OQQ57_002265"
     CDS             37..891
                     /locus_tag="OQQ57_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HCS1957013.1"
                     /translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIV
                     RGMFFLWLLMGIGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL
                     VAVIGKMPQALGKLWLLVSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS
                     GPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVP
                     DYASLQVWRVVLLCASLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHM
                     TVGMAIAG"
     gene            934..1548
                     /gene="dmsD"
                     /locus_tag="OQQ57_002266"
     CDS             934..1548
                     /gene="dmsD"
                     /locus_tag="OQQ57_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HCS1957014.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQYEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELSRLTLAQWQSQLLIPVAVKPLFR"
     gene            1707..2999
                     /gene="clcB"
                     /locus_tag="OQQ57_002267"
     CDS             1707..2999
                     /gene="clcB"
                     /locus_tag="OQQ57_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001296088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HCS1957015.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     LIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTEMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(2952..3647)
                     /gene="bioD"
                     /locus_tag="OQQ57_002268"
     CDS             complement(2952..3647)
                     /gene="bioD"
                     /locus_tag="OQQ57_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HCS1957016.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(3772..4992)
                     /gene="mlc"
                     /locus_tag="OQQ57_002269"
                     /gene_synonym="dgsA"
     CDS             complement(3772..4992)
                     /gene="mlc"
                     /locus_tag="OQQ57_002269"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HCS1957017.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNLGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPVISDSIRQQALPTYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLHG"
     gene            complement(5127..6020)
                     /locus_tag="OQQ57_002270"
     CDS             complement(5127..6020)
                     /locus_tag="OQQ57_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1957018.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPGVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRAQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPASRNFRIHLLNALR"
     gene            6127..6486
                     /locus_tag="OQQ57_002271"
     CDS             6127..6486
                     /locus_tag="OQQ57_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004983905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1957019.1"
                     /translation="MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSA
                     GLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKP
                     VMVTALLLASICTLFRQ"
     gene            6645..7379
                     /locus_tag="OQQ57_002272"
                     /pseudo
     CDS             6645..7379
                     /locus_tag="OQQ57_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000016737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(7965..8981)
                     /locus_tag="OQQ57_002273"
     CDS             complement(7965..8981)
                     /locus_tag="OQQ57_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5-like element IS5 family transposase"
                     /protein_id="HCS1957020.1"
                     /translation="MFVIWSHGTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL
                     PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF
                     ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE
                     APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL
                     GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKSKTAINI
                     EYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW
                     ERSH"
     gene            9038..9289
                     /gene="asr"
                     /locus_tag="OQQ57_002274"
     CDS             9038..9289
                     /gene="asr"
                     /locus_tag="OQQ57_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416114.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance repetitive basic protein Asr"
                     /protein_id="HCS1957021.1"
                     /translation="MGLSSAAFAAETATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKH
                     HKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQPAA"
     gene            9382..9465
                     /locus_tag="OQQ57_002275"
     CDS             9382..9465
                     /locus_tag="OQQ57_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957022.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            9565..10386
                     /locus_tag="OQQ57_002276"
     CDS             9565..10386
                     /locus_tag="OQQ57_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HCS1957023.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTAQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVVLRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTNDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(10425..10754)
                     /gene="mdtI"
                     /locus_tag="OQQ57_002277"
     CDS             complement(10425..10754)
                     /gene="mdtI"
                     /locus_tag="OQQ57_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HCS1957024.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSTLSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(10741..11106)
                     /gene="mdtJ"
                     /locus_tag="OQQ57_002278"
     CDS             complement(10741..11106)
                     /gene="mdtJ"
                     /locus_tag="OQQ57_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HCS1957025.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            11518..11661
                     /locus_tag="OQQ57_002279"
                     /pseudo
     CDS             11518..11661
                     /locus_tag="OQQ57_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pheromone autoinducer 2 transporter"
     gene            complement(12186..12467)
                     /locus_tag="OQQ57_002280"
     CDS             complement(12186..12467)
                     /locus_tag="OQQ57_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957026.1"
                     /translation="MTEAEITGLIRRVAGISQQADEQATQPDSVTAENYARVVAEVMR
                     RDGIELNGVDMRNIRTRVLELLAYRRRVEMYREKEKITYHWKKPERLRR"
     gene            complement(12481..14142)
                     /locus_tag="OQQ57_002281"
     CDS             complement(12481..14142)
                     /locus_tag="OQQ57_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HCS1957027.1"
                     /translation="MTAWNKYAEDVKTGKIPACKRLKQAVKRYFSDLKSPLYTFDREV
                     VERFIAFSRVCPHVKGPMRGRPIELEPWQQFAFACILGFKVKATGRRKYTSAFIEVPR
                     KNAKSTTAAILANWFLIMENGQQDIYTAAVSRDQARIVFDDARQMCLLSRPLRRRVNI
                     QAHKVIHPKSNSLLKPLAAKAATIEGTNPSLSIVDEYHLHPDNGVYSALELGMGARPE
                     GLLFAITTSGSNVVSACKQHYDYCCQILDGEEVNDSIFVLIYELDDENEVDDPAMWIK
                     ANPNIDVSVDREKLASTIQKARGIPSQWVEMMTKRFNIWCQGTTPWMGNGAWAECAGT
                     FTEEDLHGQECYAGLDLSSTSDISSVCYAFPVGKTIMLVSRHYLPEFQLQNPANKNRA
                     VYRQWAKAGWIRTTPGDCIDYDRIRDDIMQDAEKFNIRLVGFDTWNATHLRTQLQGAG
                     FEVEPFPQTYLRFSPAAKSFEVFVNRRVIVHRGDPVLSWSMSNVVMQSDANANIKPNK
                     KKSPNKIDPSVAALMAFGTFQAEHEDFAFDISDSHRQKLEEFSGV"
     gene            complement(14126..14482)
                     /locus_tag="OQQ57_002282"
     CDS             complement(14126..14482)
                     /locus_tag="OQQ57_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase small subunit P27 family"
                     /protein_id="HCS1957028.1"
                     /translation="MARPPKAPAYLDDIAVKQWREKSRQLAERGDLTPADWSNLELYC
                     VNYSIYRKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLGFDPISRR
                     KNPPETEEEDELDRLE"
     gene            complement(14605..14787)
                     /locus_tag="OQQ57_002283"
     CDS             complement(14605..14787)
                     /locus_tag="OQQ57_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957029.1"
                     /translation="MTLMNEREQKRLIRGLIRQRDAWKTQETGHKDKASGRAERITAK
                     RLTDRDREVMECFRNR"
     gene            complement(14771..15211)
                     /locus_tag="OQQ57_002284"
     CDS             complement(14771..15211)
                     /locus_tag="OQQ57_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707053.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCS1957030.1"
                     /translation="MPWQPLRRCTEPGCNRRVKSGKCEEHRRAAWRAEDARRGHRRAR
                     GYSRQWEKYRAMYLSKNPLCVRCLEKGIYTPAVVVDHIIPINGGDDVLFWPEWNHQPL
                     CQACHNQKTKWLDPATKSKRAAGGFREEEERAANRNNWMYDADE"
     gene            complement(15211..15507)
                     /locus_tag="OQQ57_002285"
     CDS             complement(15211..15507)
                     /locus_tag="OQQ57_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HCS1957031.1"
                     /translation="MTEELITLEEVKLHCRIDGDEEDQLISGYIAASLEACQIHIGRR
                     FDDGLEFTPAIKIGCMMFIAHLYENRQLVADNAKTRVPMTIGALWTAYRDVGVY"
     gene            complement(15504..15842)
                     /locus_tag="OQQ57_002286"
     CDS             complement(15504..15842)
                     /locus_tag="OQQ57_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HCS1957032.1"
                     /translation="MNIGRLRDRVTIQTLKQTRDITGEILETWEDGHTLWASVNMISS
                     KEAISSGAELAIGTVRIWIRYRKDINATSRIKVNTGPLAGRVLNIIGQPLPDAARTRL
                     EILCREGAEK"
     gene            complement(15839..17050)
                     /locus_tag="OQQ57_002287"
     CDS             complement(15839..17050)
                     /locus_tag="OQQ57_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1957033.1"
                     /translation="MWLFRRKKEQRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAV
                     MNAVTVISEAVATMPCYLYLVRNEKGKEAREWLDSHPVDHILNERPNAWQTPYQFKRM
                     MIRHCLLNGNAYAVIQWGRDGFPVALHPYPPQSVNVEQTGEHNWRYCITDAYTGNTRN
                     YLPWEVLHLRYSTDDGFMGRSPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGE
                     WLDGVKGKQALAALERYKGARNAGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDI
                     ARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQIKNALLVASPVPGI
                     RYQVEFDSADLLRATPGERFATYERGIKSGVMCPNEAREREGLSPRDGGDEFSQAWKQ
                     EVKISEGEKPE"
     gene            complement(17052..17624)
                     /locus_tag="OQQ57_002288"
     CDS             complement(17052..17624)
                     /locus_tag="OQQ57_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309618.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HCS1957034.1"
                     /translation="MGEKIMKSMEIRSSEITTSASNTLTGYVVRWDKLSELLWGEFYE
                     KFQRGAFTEWLAVGNDVRGLYEHDHSMLLGRTRSGTLKLEEDETGLRFELTPPDTSTG
                     RDVIELVKRGDISGMSFGFRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGV
                     ELARRSLYEQHPEKMPRADNRRWWVDLAGV"
     gene            complement(17664..18821)
                     /locus_tag="OQQ57_002289"
     CDS             complement(17664..18821)
                     /locus_tag="OQQ57_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HCS1957035.1"
                     /translation="MPRIIELRQQKTAIKNQMRDMLENAEKENRSLNDAEGAKFDELR
                     AKAESLDKDISRLEAIADEERSKPGKSSQTTDPAELRSYILTGETRALSTGVPADGGY
                     TVIPELNTEIMRMLADESTMRRICTVKKISSNEFKQLVSAGGVTVNHGEEGKAREQTS
                     TPQINEVSIKLYPVYAYPRTTQEIVDFSDVDILSWLTGEIGDTFTETEESDLVVGDGD
                     KKAKGFLSVPRAEKNDKERDFGTLQVIKPSESLAWTSADPLIDLKFALRKKYRKNAVW
                     VVNSTTAAKLQKVKNANGDYIWRDRLQAGDPDTLLGLPVEYLEFMPDNVIALGDFKRG
                     YYIVDHETGVRTRPDNLTEPGFIKIFTQKYLGGGVVDSNAIKILELPQDDD"
     gene            complement(19123..19347)
                     /locus_tag="OQQ57_002290"
     CDS             complement(19123..19347)
                     /locus_tag="OQQ57_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309616.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957036.1"
                     /translation="MPMKFDEILKQRDKYHADNMETMSINDYRAFLETGALIEKDQHG
                     FVRCALSGEMLAVNPEQIDALIEFLKGIRD"
     gene            complement(19472..19744)
                     /locus_tag="OQQ57_002291"
     CDS             complement(19472..19744)
                     /locus_tag="OQQ57_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HCS1957037.1"
                     /translation="MVHDRIAEELEAKGFYRRAAARWGEVMLLVETDKERHQVTMRRL
                     ECSRKAQKPPEPPDNFGDLRKAVDRTYAEMGIDGVSDEIWRNYPDS"
     gene            complement(19755..>20045)
                     /locus_tag="OQQ57_002292"
     CDS             complement(19755..>20045)
                     /locus_tag="OQQ57_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCS1957038.1"
                     /translation="QDGQATLWLSVIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQ
                     NGETRQGYQVIADSVISVRAARPGGNRRKTTGTQGNQPPAGGDDPYGDGIPF"
BASE COUNT         4475 a         5373 c         4925 g         5272 t
ORIGIN      
        1 ccactggtta tctggctaat ccggaggaag tgtaaaatgg gaaatggatg gcatgaatgg
       61 ccactggtta tctttaccgt attgggtcaa tgcgtagtag gcgcgctgat tgttagcgga
      121 attggctggt tcgccgccaa aaatgacgca gaccgtcagc gtattgtccg tggcatgttt
      181 ttcctctggc tgttgatggg catcgggttt attgcctctg tcatgcacct gggatcgcca
      241 ctgcgagcgt ttaactcgct gaatcgaatc ggagcttctg gtctgagtaa cgagattgct
      301 gccggttcca tattttttgc cgttggtgga ctatggtggc tggtggcggt catcggtaaa
      361 atgccgcaag cgttggggaa actctggtta cttgtcagca tggcgctcgg cgtcattttc
      421 gtctggatga tgacctgcgt gtatcaaatc gacaccgtgc caacctggca taacggttac
      481 actacgctgg ctttcttcct gacggtattg ttgagcggtc caatacttgc tgccgcaatt
      541 ctgcgggcag ctcgcgttac atttaatacc acaccatttg ccatcattag cgttctggcg
      601 ctgatcgctt gtgccggggt gattgtgctg caaggtttgt ctctggcgtc tattcactca
      661 tccgtgcaac aagccagcgc actggtacca gattacgcct ccttacaggt ctggcgtgtg
      721 gtattgttat gcgcaagtct tggatgctgg ctttgcccgc tcattcgtcg ccgtgaacct
      781 cacgttgccg gacttattct ggggctaatc ctcatacttg gcggtgagat gatcgggcgt
      841 gtgctctttt atggcctgca catgacagta ggaatggcta ttgcaggtta acaaattggt
      901 gcggggcaac ccgcacattt caggatgtta ggaatgaccc atttttcaca gcaagataat
      961 ttttctgtcg cggcgcgcgt gttgggcgcg ctgttttatt acgctccaga gagtgcggaa
     1021 gccgcacctc tggttgcggt actcaccagt gacggctggg aaactcagtg gcctctacca
     1081 gaagcgtcat tagcgccgct ggtgacggct tttcagacac agtgtgaaga gactcacgcc
     1141 caggcctggc agcgtttgtt tgtcggcccg tgggcactgc cgtctccgcc gtgggggtcg
     1201 gtctggctgg atcgcgaatc tgtgctgttt ggcgattcaa cattggcact tcgtcagtgg
     1261 atgcgcgaga aaggcattca gtttgaaatg aagcaatacg aaccggaaga tcattttggt
     1321 tcactgctgt tgatggctgc gtggttggcg gagaatggtc gccagacaga atgcgaagaa
     1381 ttgctggcat ggcacctttt tccgtggtca acacgttttc ttgatgtttt tatcgaaaaa
     1441 gcagaacacc ctttctaccg tgcactgggt gaactgtctc gcttaacgct ggcgcaatgg
     1501 caatcacaac tgttaattcc tgtcgcggtt aaaccgctgt ttcgatagga tcaccgtaat
     1561 attgccggat ggtgacgatt acgcgcaatc cggcaataat aggttacagt gtcacgtttt
     1621 tttatctctt aaagcacgca ctgcttttgc ggctggcctc ttttgccgca aaatagtcgc
     1681 ccgtgtttca ttgcccattt ctgctcatgc atcatctaca catctatccg gatctgcgca
     1741 ctatgttccg ccgtctgctt atcgcaacag tcgtcggtat tctcgcggcc tttgccgttg
     1801 ccgggtttcg tcatgcgatg ctgctactgg agtggttgtt cctcaataat gactccggca
     1861 gtctggtcaa tgcagcgaca aacctttccc cctggcgacg gttgctaact ccggcgctcg
     1921 gcggactggc ggcgggtttg ttgctgatgg gctggcagaa atttacccaa caacgccctc
     1981 atgcgccgac cgattacatg gaagcgttgc aaaccgatgg acagttcgat tacgcagcaa
     2041 gcctggttaa atcgcttgcc tcgctgctgg tagtaaccag cggcagtgca attggtcgcg
     2101 aaggtgcgat gattctttta gctgcccttg ccgcctcctg ttttgcccaa cgttttacgc
     2161 cacgccagga gtggaaatta tggatcgcct gtggcgccgc ggcgggaatg gctgcggcct
     2221 atcgtgcccc gcttgctggc agtttattta tagccgaagt gctgtttggc actatgatgt
     2281 tggcctctct cggcccggtg attatttccg ccgtcgtggc attgctggtt agcaatctga
     2341 ttaatcatag cgacgcgtta ctctacaacg tacaactctc agtgacggtt caggctcgtg
     2401 actatgcgct gattatcagt acaggtgtgc tggcaggtct gtgcggacca ctgttgttaa
     2461 cgttaatgaa cgcctgtcat cgtggatttg tgagtctcaa acttgcgccg ccctggcaac
     2521 tggcactagg cgggttgatc gtgggtctgc tttccctgtt cacacctgca gtgtggggca
     2581 acggctatag caccgtacaa tcctttttaa ccgccccacc actgttaatg atcattgccg
     2641 ggatcttcct ttgtaaactg tgtgccgtgc tggcgagtag cggttccggc gcacccggtg
     2701 gtgtctttac accgacgcta tttatcggtc ttgccattgg catgttgtat ggtcgtagcc
     2761 tgggattatg gttccctgat ggcgaagaaa ttacgctttt actcggattg accgagatgg
     2821 cgacactgtt ggcggcaacc acgcacgcgc cgattatgtc gacgttgatg atatgtgaaa
     2881 tgaccgggga gtatcagcta ctccccggtt tattgattgc ctgcgtcatt gcgtcggtaa
     2941 tttcgcggac gttacaccgt gactctatct accgccagca cactgcgcag catagctaag
     3001 cggatgtatt gccccagttc tcgctgttcg gcgcgcggca gataaggcag ttcaccaatg
     3061 agcggtgccg gaagtttttt acccagcaca tcaatgattt ccgcataatg cgccagtcct
     3121 gggttgattc ggttagccac ccagccaatg agcggcagcc cgtcgttggc aatcgcctga
     3181 gctgttagca gtgcatggtt aatgcaacct tcctgaatac cgacaaccat caacaccggc
     3241 aactgttcct gcaccaccca ttcagagagt ggacgcaaat cattcatcag actgcgccag
     3301 ccgccagtcc cttctaccac gacatgatcg actttatcgg tcaggtttgc caggccgttt
     3361 gaaatgaggg tgtaattgat tgggcaactg tgcgccacgc tactttcttc ttcgcttaac
     3421 gcgataggat taactgcttc ataaggcagt tcgatggttg aaacactctg caacaccagg
     3481 gcatctttat tacgcagccc ttcgggtgtc tctttgctcc ccttcgctac gggtttatat
     3541 cccgcaactg tttttccctg ggaggctaac gcttgtagca atgcgcggga aaccaccgtt
     3601 ttccctacag aagtgtctgt accggtaata aagaaacgct tcagcatcac taactccacc
     3661 gttatgcttc acaaatataa actaggaaaa taattaacct tgaaagtcta agttatgctt
     3721 tcctggccca aattgagata gcgcaaattt tggtagaaca gttaaaaaat gttaaccatg
     3781 caacagacga atcaacaaag aaccgttata catcgcgtct tttaccagcg cagcgcctgc
     3841 catcgtgccc tggttagaaa actgagtact ctcaacgcta atgtgctgac tatacgtagg
     3901 aagggcctgc tgacgtatgc tgtccgagat gacagggaag aggatatctg ccgctttact
     3961 taacggtgag ccaatcagta ttttttgtgg gttaaataaa ttcaccatga tggcaagaat
     4021 gcgcccgaca tgcgcgccca ccccggtaat gatgtctttt gccagtagat cgccgcgcaa
     4081 tgccgcctga cacaatgagt ccacggttaa cggttgccca tgtaacatcg agctcatgga
     4141 ttgattgaga cgcagctgtg ccagctcaag aatactgtcc acactggcga tggtttcgag
     4201 gcagccgagg ttcccgcaat aacagcgttt accatatggg tcgacctgtg tgtggcctat
     4261 ttccacgaga ctactgctgc ctgcgtgtag cagatgacca tcggtaatga cgcccgcccc
     4321 cacgttgtga tcgataacca cctgaatcac atcgcgcgcc ccgcgtgagg caccaaacaa
     4381 ggcctctgcc atcgtccatg cgctgatatc atgctgaata taaaccggta cgccggtatg
     4441 ctgctccagc gcctcgccga gcggcatctc ttttacatcc tcgtagaacg gcatgcgatg
     4501 tacaatacca ttttccgtat caataattcc cggcagggtt atggcaatcg aagttagacg
     4561 ctcaagtttt ttctggtggc ggataaaaaa ctgatcgata tgggaaatga tacgatccag
     4621 caatggcaag tcatctttta acgccagttc ctgcgactct tccaccacca gtttgctgct
     4681 cagatcgcgc agagcaagga aaatctcacc gcgactaatg cgcagagaaa gatagtgcca
     4741 ggcttcagtt tcaaccacca gtcccaccgc cggacggcca cggttccccg cttctttgat
     4801 ttccagctct tgcaccaagt gtgcttcgag catctcacgg acaattttag tgatactggc
     4861 aggagccagc tgcgccagac gggaaagatc gatacgcgag actggaccaa gctgatcaat
     4921 caggcgataa accgcgcccg cgttggtctg ctttatttga tcaatgtgcc caggctggtt
     4981 ttcagcaacc accgcatact ccctatattt tcgcgctccg aaataatctg taggctatgg
     5041 tgaagcactt caatacgtgt cgtcaaattt ttacttagac atgtgattaa cagcacattt
     5101 ttcgggcttt ttcgctgaaa tttccctcac ctgagagcat tcagcagatg aatacgaaag
     5161 ttacgcgaag ctggactttg ttcatgatgt ttcggccaga ccaaccacat ttcagaaacc
     5221 gcatcctctt cagcaatcgg cacccagcgc atttcgttga gctgagcacg tttaaatgaa
     5281 gcaggcaaaa ttgaaacacc cagaccggcg gaaaccagac cgatgatggt cattgcctcg
     5341 cccacctcct gagtgatgac gggcgtcaaa tggtaacgtc gcatcagccc gagaatatcg
     5401 tcatacagcc ctgtcccgac gtgcggatca aaaaagacga agggttcttt cgccagttca
     5461 gccaacgtta cattcgggtt atttgccagg ggatgatcgt gcgggatcat cgccataagc
     5521 ggttcatgga cgatgactgc gtgttcaagc gtctccggta acgctgtgtt acgcagcaat
     5581 cccatatcca gcgttccttc aatgagcgga gcgatttgct cacgagtgtt catttcgcgg
     5641 gtttgtaaat ggacaccggg ataatcacgg cgaaacagcg ataacgtatc ggacaccgcc
     5701 cgaataaaag gagcggacga agtaaaacca atgcgcaact cccccgcttc accctgatgc
     5761 agtctttcag cgcgagcggc agcgtcatct accatagaca ggatttgccg actatctgca
     5821 agaaactgtt ttcctgctgc cgtcagcaat acactgcgat tagttcgtgc cagcagtcgg
     5881 gcaccaattt gttgctccag tgcctgaatc tgctgactta gcggtggttg cgaaatattc
     5941 aggcgggcag cggcgcgccc gaaatgcagc tcttccgcaa cagcaacaaa gtaacgcaga
     6001 tgacgaagtt caatattcat atttaaaaca tcttatttga gattattaat atattagaca
     6061 gaacaattcg attttcctaa cctatgtata agcctgatcc acaggcatat ttagcaagga
     6121 tttcaagtga gccgtactac aactgttgat ggcgctccgg caagcgacac tgacaagcaa
     6181 agcatttctc agccaaatca atttattaaa cgcggtacgc cgcaatttat gcgcgtcacc
     6241 ctggcgctgt tctctgccgg actggcaacc tttgcactcc tctattgtgt gcagcctatc
     6301 cttccggtgc tttcgcagga gtttggctta acccccgcga acagtagtat ttcactgtcc
     6361 atttccacgg cgatgttggc tattggtttg ctgtttactg gccccctatc cgatgccatt
     6421 ggtcgcaaac cagtgatggt cacggcgcta ctgttggcct ccatttgtac gttatttcga
     6481 caatgatgac cagctggcac ggcattttga ttatgcgcgc cttgattggg ctttcgttaa
     6541 gtggcgtggc agctgttggc atgacttatc ttagcgagga aatccacccc agtttcgtgg
     6601 ccttttcgat ggggttgtat atcagcggca actcaattgg cggcatgagc ggacgcttaa
     6661 ttagtggtgt cttcacggac tttttcaact ggcgaattgc tctggcggca atcggttgtt
     6721 tcgcgctagc ctcggcgttg atgttctgga aaatccttcc ggaatcacgc cattttcgcc
     6781 cgacttcgct gcgacctaag acgttgttta tcaactttcg tctgcactgg cgtgaccggg
     6841 gattaccgtt attgttcgca gaaggctttt tgctgatggg gtcgttcgtc acgctgttta
     6901 attacatcgg ctatcggttg atgctttccc cctagcatgt cagtcaggcc gtggttggct
     6961 tattatcgct ggcttatttg accggtacac ggagctcacc caaagccgga accatgacca
     7021 cccgctacgg gcgcggtccg gtgatgttgt tttcgacggg ggttatgctg tttggtttac
     7081 tgatgacctt attcagctcg ctgtggctga tctttgccgg aatgttactc ttctcagcag
     7141 gattcttcgc agcccactca gttgccagca gctggatcgg cccccgcgca aaacgcgcta
     7201 aaggccaggc ctcctcgctg tatctgttca gttactatct ggggtcgagt attgccggga
     7261 cgctgggtga tgttttctgg cataactatg gctggaacgg cgtcggcgca tttattgctc
     7321 tgatgctggt cattgctctg ctggtcggga cgcgtttgca tcgtcgtctg cacgcctgaa
     7381 aaataagccc ggactgcggt aactacacgt ccggacttat tgcttgctca aaccaacgtt
     7441 aatagccatc ctaaaataga cgaagcgcca gccaattccc gcagtgcgtc tagcgtcatc
     7501 aggattataa gtacccaaat aaacggattc attttgctgt gtgtcattta ttactgatgc
     7561 gcagttattc taccgctttg taagtagtaa aatagttaac ccgatcaaga ctactattat
     7621 tggtagctaa atttccctta agtcacaata cgttattatc aatgctgtaa tttattcagc
     7681 gtttgtacat atcgttacac gctgaaacca accactcacg gaagtctgcc attcccaggg
     7741 atatagttat ttcaacggcc ccgcagtggg gttaaatgaa aaaacaaatt gagggtatga
     7801 caatgaaaaa agtattaggg aaggtgcgaa taagcgggga aattcttctc ggctgactca
     7861 gtcatttcat ttcttcatgt ttgagccgat tttttctccc gtaaatgcct tgaatcagcc
     7921 tatttagacc gtttcttcgc catttaaggc gttatcccca gtttttagtg agatctctcc
     7981 cactgacgta tcatttggtc cgcccgaaac aggttggcca gcgtgaataa catcgccagt
     8041 tggttatcgt ttttcagcaa ccccttgtat ctggctttca cgaagccgaa ctgtcgcttg
     8101 atgatgcgaa atgggtgctc caccttggcc cggatgctgg ctttcatgta ttcgatgttg
     8161 atggccgttt tgctcttgcg tggatgctgt ttcaaggttc ttaccttgcc ggggcgctcg
     8221 gcgatcagcc agtccacatc cacctcggcc agctcctcgc gctgtggcgc cccttggtag
     8281 ccggcatcgg ctgagacaaa ttgctcctct ccatgcagca gattacccag ctgattgagg
     8341 tcatgctcgt tggccgcggt ggtgactagg ctgtgggtca ggccactctt ggcatcgaca
     8401 ccaatgtggg ccttcatgcc aaagtgccac tgattgcctt tcttggtctg atgcatctcc
     8461 ggatcgcgtt gctgctcttt gttcttggtc gagctgggtg cctcaatgat ggtggcatcg
     8521 accaaggtgc cttgagtcat catgacgcct gcttcggcca gccagcgatt gatggtcttg
     8581 aacaattggc gggccagttg atgctgctcc agcaggtggc ggaaattcat gatggtggtg
     8641 cggtcaggca aggcgctatc cagggataac cgggcaaaca gacgcatgga ggcgatttcg
     8701 tacagagcat cttccatcgc gccatcgctc aggttgtacc aatgctgcat gcagtgaatg
     8761 cgtagcatgg tttccagcgg ataaggtcgc cggccattac cagccttggg gtaaaacggc
     8821 tcgatgactt ccaccatgtt ttgccatggc agaatctgct ccatgcggga caagaaaatc
     8881 tcttttctgg tctgacggcg cttactgctg aattcactgt cggcgaaggt aagttgatga
     8941 ctcatgatga accctgttcc atggctccag atgacaaaca tgatctcata tcagggactt
     9001 gttcgcacct tccttagctc tggttgttgc cgctgctatg ggtctgtctt ctgccgcctt
     9061 tgctgcagag actgcgacga ccaccaaagc agcgccggcg aaaacgacac atcataaaaa
     9121 acagcataaa gcagcacctg cccagaaagc gcaggcagct aaaaagcatc ataaaaatac
     9181 gaaagctgaa cagaaagccc ctgaacaaaa agcgcaggca gcgaagaaac acgccgggaa
     9241 acacagtcat cagcaaccgg caaaacctgc tgcacaaccc gcagcgtaag ttttcaacag
     9301 taatgctggc gcgccccctc gcgcctgaaa attacggtgc taagcgggta acgtttagca
     9361 ccgcctttag cggagggtag tatggtgggc cgttatcgct ttgagttcat tcttatcatc
     9421 cttattttat gcgcactgat tgccgcccgt ttttatcttt cctgactgta gttatctgat
     9481 tttactccca ctttcatccc gtcccgtcta tagtatttat gagggtttgc ttttaataat
     9541 cataattacc caccagagtg tgatatgcgt acaaccattg ctgtagtgtt gggtgcaatt
     9601 agtttgacgt ctgcttttgt gtttgcagat aaaccagacg ttgccaaatc ggcaaacgat
     9661 gaggtcagca ccctgttttt tggtcatgat gatcgtgtgc cagtgaatga cacggcccaa
     9721 tcaccgtggg atgcggttgg gcaactggaa acggccagcg gcaatttatg tacggcgacg
     9781 ctgattgcac ccaatctggc attaacggca ggacactgtt tattgacacc tccaaagggt
     9841 aaagccgata aagcagtggt gctgcgtttt gtgtcaaata aaggtctttg gcgctatgag
     9901 atccacgaca tagaaggccg cgttgatccg acactgggaa agcggttaaa agcagatggg
     9961 gatggttgga ttgtacctcc cgcagccgcg ccgtgggact tcggattgat tgtgctacgt
    10021 aatccccctt ctggcattac accgttgccg ttatttgagg gagataaagc cgcgcttact
    10081 gccgcattaa aatcggctgg ccgtaaagta actcaggcgg gataccctga agatcatctc
    10141 gatacgttgt acagtcatca aaactgtgaa gtgactggct gggcgcaaac gtcggtgatg
    10201 tcacatcagt gcgatacctt gccgggtgac agcggttcgc ctctgatgtt gcataccaat
    10261 gacggctggc aattaattgg ggtgcaaagt tcggctcctg ccgcgaaaga tcgctggcgc
    10321 gccgataacc gggccatttc tgttaccggt tttcgcgaca agctggatca actgtcgcaa
    10381 aaataatgtt caaacgctgc ccgactgtgc gggcagcgtg ttcatcaggc aagtttcacc
    10441 atgatcattc cagccaacag caagaccagg ccaatccagc ctttacgatt taaccgttga
    10501 ccaaacaaga tccaacctgc ggctaacgtg gcggcaatac caaacccgcc ccacaatgca
    10561 taagcgacag acaagtcgat ccctttaacg gcctgagaaa gcgtactaaa ggcagccagc
    10621 accgccgcca gggagagcaa gccaaatatt ttgcgacgaa agccgtcaga aaatttcaaa
    10681 aagacgttag caacgatttc cagcacgatt gccaatgcca gccaggcggc gtgaacccat
    10741 tcaaactgcg ccatggttta cctccagttc aggtttacgc gctttacggg tacctgattt
    10801 tatcaacaca atcccggcga ccagggtggt taacccggca attttcatca gcgataaact
    10861 ttcgtcgaat aacaaaacgc taaacaaggt aataaataaa ataccgatac cttcccacag
    10921 cgcataagct acgcctaagg cgatcttttt aacggcgaaa gagagaaata tatacgacag
    10981 agaaatcatc accagcatta aaataaagcc gccatttccc tcactgacgc tcgcccattt
    11041 cattgacagc gtaccggtaa tttctgtagc aatagccagg cctaataaaa tccaataaat
    11101 atacattgtc cttctcctgc aagagaatta ttttaatttt cgcttaattc agcgaaatta
    11161 aagtaaagtg gtcaagcccc gcgcataggg caagcttagg cagaagaaag gactaaagcg
    11221 cgttgcgcca gtgctgctca cctacgagca agatagtgga tgaggtacaa agatgggtaa
    11281 atgttgaaaa taaggtcctg aacaaattgt ccataatatt acaattatcc gcagtgttgc
    11341 ttctcgtcat cgcggatgat aattgtcctc ggtagttgaa cacgcctgat ttgtatcata
    11401 gcttaagaat taactcaaaa tattttcact tctttacctg agcggtttga ttttcgttat
    11461 gatgacggag cgaaaaagac attattatta gcaaaggaag aaaaaacggg gacaagcatg
    11521 gcaaagccga tcatcacgct caatggccta aaaatcgtca ttatgttggg aatgctggtc
    11581 attattctct gcggtatccg ttttgccgcc gagatcatcg tgccgtttat tctcgcatta
    11641 tttattgctg ttatatataa cttatttcac ttaacgcatt gatttaatta aataatttgc
    11701 accacaaaaa gtgccaaaaa tcgcaaaatg actacaccag tgactacacc gttcggtgca
    11761 ctgtatgaaa caacgtggaa caaatagaca caagaaatat acaggcagat catctttcca
    11821 gggggaagcg caccaattca tgaggggcgt tgctgtcgat atggggatct ccacctacct
    11881 ggattttttt ccggttaaac gttaatcagg ctggtgggct ttacctgttc ggtaggagtg
    11941 gtcattatga ccattcagac aatgacctta atcagaattt ttcgctaaaa aatgacgtta
    12001 accacgtcgt ccggaaaaca caaaatcccg tcgattttta attaacggtt aaaccgtctt
    12061 ttgtcacggc gtgtcactgg ctgtcactct ccgtcacgat tgggcgtggt gattatcacc
    12121 attcagaatc taaagggtga cgcttccggc ctcctcaaat tgaggtttcc gaaaatatca
    12181 accagttacc gccgcaaccg ctccggcttc ttccagtggt acgttatttt ctccttctcc
    12241 cgatacatct ccacgcggcg acggtaggcc agcaactcaa gaactctggt tcgtatgttg
    12301 cgcatatcca cgccattaag ttctatacca tcacggcgca tcacctcagc aacaacacgc
    12361 gcataatttt cggctgtcac gctgtccggc tgcgtggcct gttcgtcagc ctgctggctg
    12421 attccggcaa cgcggcggat taatcccgtt atttcggctt ctgtcatgct gctgacctca
    12481 ttacaccccg ctaaattctt ccagtttctg gcggtggctg tcgcttatat caaaagcaaa
    12541 atcctcatgc tctgcctgga atgtaccaaa cgccatcagc gccgccacgc tcgggtctat
    12601 cttgttcggt gattttttct tgttcggctt gatattggcg ttcgcgtcac tctgcatcac
    12661 gacgttactc atcgaccagg acaacaccgg atcgccacga tgcacaatca ccctgcggtt
    12721 aacaaaaact tcgaacgatt tcgccgccgg actgaatctg aggtaggttt gcgggaacgg
    12781 ctccacctca aaacctgccc cctgtaattg cgttctgaga tgcgtggcgt tccacgtatc
    12841 aaagcccacc agcctgatat taaatttctc cgcgtcctgc atgatgtcat ctctgatccg
    12901 gtcgtaatca atgcagtcgc caggcgttgt gcgtatccag cctgctttag cccactgacg
    12961 atagacagcg cggtttttat tggcggggtt ctgtagctgg aactccggca gataatgacg
    13021 ggaaaccagc ataatggttt tacctaccgg aaaggcatag cacacgctgg aaatatcgct
    13081 tgtggatgat aaatccagcc ccgcgtaaca ctcctggccg tgtaaatctt cctccgtgaa
    13141 cgttccggca cactcagccc atgcgccgtt acccatccac ggggtagtcc cctgacacca
    13201 gatattaaat cgctttgtca tcatctccac ccactgcgac ggaatacccc gcgctttctg
    13261 gatggttgag gccagttttt cacgatccac ggaaacatca atattagggt tcgcttttat
    13321 ccacatcgcc ggatcatcaa cctcgttttc gtcgtccagt tcgtaaatca gtacaaaaat
    13381 tgaatcgttg acctcttcgc cgtccaggat ctggcagcaa taatcatagt gctgcttaca
    13441 ggctgaaacg acgttactgc ctgatgtggt aatggcaaat aacagccctt cgggacgtgc
    13501 gcccatcccc agctcaagcg cagaataaac gccgttatcg gggtgtaggt ggtattcgtc
    13561 cacgatggaa aggctggggt ttgttccctc gatggttgcc gcttttgctg ccagcggctt
    13621 taacaggctg ttgcttttcg ggtgtatcac cttatgcgcc tgaatattca cccgcctgcg
    13681 taacggtcgg gataaaaggc acatctgacg cgcatcatca aagacgatcc gcgcctggtc
    13741 acggctcacc gctgcggtgt aaatatcctg ctgaccgttc tccataatca gaaaccagtt
    13801 agccagaatc gcggcggtcg ttgatttcgc atttttgcgc ggcacttcga taaaggcgct
    13861 cgtgtatttg cgccgtccgg tggccttaac cttaaagccg aggatgcacg caaaggcgaa
    13921 ctgctgccac ggctccagct caatgggtct gccacgcatc ggtcctttta cgtgcgggca
    13981 caccctggaa aaggcaataa accgctccac aacctcacga tcgaacgtgt aaagggggct
    14041 tttaagatcc gaaaagtacc gtttaacggc ctgtttcagc cgtttacagg ccggaatttt
    14101 gcccgttttt acgtcttctg cgtacttatt ccaggcggtc aagctcgtcc tcttcttctg
    14161 tttccggtgg atttttacgg cggcttatcg ggtcaaaacc aagcaaggag gccattttta
    14221 tcatcactct ttcagcgtcg gatttcgcgc ttaatgcggg gtttctgctc tcgccgccct
    14281 gactgttaac aatgctgaac ccgcgcgccg caaggtctgc gacggctttg cggtatatcg
    14341 agtaattgac gcaatacagt tccagattgc tccagtcggc gggggtcagg tctccccgtt
    14401 ccgcaagctg ccgcgatttt tcccgccact gcttcacggc gatgtcatcc aggtaggcgg
    14461 gggctttcgg tggtcttgcc atgcttattt ttcgtcagat tatttttcaa aaaattcccg
    14521 tgcataaaaa tttggggagg cgttcggtgc ccggcggggt cgggtttgtc ctgaaaacgc
    14581 cccccacccc gtcatacagc ctcatcagcg attgcggaaa cattccataa cctcgcggtc
    14641 acggtcggtt aatcgcttcg ctgtgatgcg ttctgcgcgt cctgacgctt tatctttatg
    14701 ccctgtttcc tgtgtcttcc atgcgtcacg ctgccttata agtccacgga taaggcgttt
    14761 ttgttcccgc tcattcatca gcgtcataca tccagttatt gcggttagcg gcccgttctt
    14821 cctcttcacg aaatccacct gcggcacgct tgctttttgt tgctggatca agccacttcg
    14881 ttttctggtt atgacacgcc tggcacaatg gctgatggtt ccattcgggc cagaagagaa
    14941 catcatcacc gccattaatc gggataatgt gatccaccac cacggcgggc gtatatatcc
    15001 ccttctcaag gcatcgcacg cataacgggt ttttactcag atacatggcg cggtattttt
    15061 cccactgtct ggagtaccca cgcgcgcggc ggtgtcctcg tctggcatcc tctgcacgcc
    15121 atgccgcccg cctgtgctcc tcacacttgc cggacttaac gcgcctgtta cagcctggtt
    15181 ctgtacatcg tcttaatggt tgccacggca tcagtacacc cccacatcac ggtaagccgt
    15241 ccagagcgcg ccaatcgtca tgggtacgcg cgtttttgcg ttatccgcta ccagctggcg
    15301 attctcgtac aggtgagcga taaacatcat gcagccaatc tttatggctg gcgtgaactc
    15361 cagcccgtca tcaaagcgcc tgcctatatg tatctggcac gcctcaagcg atgcggcaat
    15421 gtatccgctg attaactggt cttcctcgtc gccatcgatg cggcaatgga gtttcacttc
    15481 ttccagggtg ataagttctt ctgtcatttt tccgcgccct cacgacaaag aatttcaagg
    15541 cgtgtcctgg cggcatccgg cagcggttgc ccgatgatat tcagtacacg ccccgccagc
    15601 ggccccgtat tgacctttat ccggctggtg gcgttgatgt ccttccggta ccgtatccag
    15661 atccttacgg taccaatcgc cagctctgca cccgatgaaa tggcctcctt gctgctgatc
    15721 atgttcacgc ttgcccagag tgtgtgaccg tcctcccacg tttcgagtat ttcgccggtt
    15781 atatccctgg tctgtttcag ggtctgaatc gttaccctgt cacgcagtcg ccctatgttc
    15841 attccggttt ttctccctcg ctgattttta cttcctgttt ccatgcctgg ctgaactcat
    15901 caccaccatc acgcggggac agcccttcac gttcgcgggc ttcgttcggg cacataacgc
    15961 cggatttgat gccgcgttca taggtggcaa agcgttcgcc aggtgtggcc cgtaacaggt
    16021 ccgcgctgtc aaactccacc tgataccgga taccaggtac aggcgaggcc accagcaggg
    16081 cgttttttat ctgctgctca aagttcgcca gccacgggcg cattgtcatg gtgagaaatg
    16141 cgcggcttgc ctcgctgaaa ttgctgtagg tgctgttgct gtattcctgc agaaaaatcg
    16201 gcgagacgtt gaacattcgg gcgatgtctt caatggtgaa gcgacgggag gccagccatt
    16261 cagcatcctg attactcatg cccagctgct gatagctcat acccccttca agaatgggcg
    16321 tttttccggc gtttctggct cctttgtagc gttccagtgc ggctaatgcc tgtttgccct
    16381 tcacgccgtc cagccattcg cctgacgtga taacccctgc cgccatcatg ccatcacgca
    16441 tcacgctcgc gccgtggcgt tgttgggcca gcccaagccc cagcgattcg cggcagatgg
    16501 ttacaggtga gcgccccata aaaccgtcat ccgtggagta acgaaggtgg agaacctccc
    16561 acggtaaata gttgcgggtg tttccggtgt aggcgtcagt gatgcagtag cgccagttat
    16621 gctcacctgt ctgctcaacg ttcaccgact gcggcgggta aggatgtaaa gccaccggaa
    16681 aaccatcacg cccccactga atcaccgcat aagcattacc gtttaacagg cagtggcgga
    16741 tcatcattcg cttaaactgg tagggagtct gccacgcgtt cgggcgctcg ttgaggatgt
    16801 gatcgaccgg atgagaatca agccactcgc gggcctcctt ccccttctca ttgcgtacca
    16861 ggtacaggta acacggcatg gtagccaccg cctcagagat gaccgtcacg gcgttcatga
    16921 cggcgggcag tgattccgct gtccccgatg atacgtactc acccgccccc gtgttcgatg
    16981 tgccagccag cgccataaat tcatcaagcg tcatgctgcg ctgctctttt tttcttctga
    17041 aaagccacat atcacacccc cgctaaatcc acccaccagc ggcgattatc cgcacgcggc
    17101 attttttctg ggtgctgctc atacagggaa cggcgggcca gctccacgcc ggaatcgggg
    17161 taagccggta ccgatgtaac ggtaatttcg tacagttccg ccaccagcac ggtgcgcacg
    17221 catggatctg ttgtggtatc ccatacatcc ttacgggagc gaaagccaaa gctcatcccc
    17281 gagatgtccc cacgcttaac cagttcgata acgtcgcgcc ctgtactggt atccggtggg
    17341 gtcagttcaa agcgtaaccc tgtttcgtcc tcttccagtt tcagcgtgcc ggaacgggta
    17401 cgccccagca acatgctgtg gtcatgctca tacaggccgc gaacgtcatt acccaccgca
    17461 agccattcag taaacgctcc ccgctggaat ttttcgtaaa actcccccca tagcagctct
    17521 gaaagcttat cccagcgaac aacgtagcct gtaagcgtgt tgctggcgct ggtggtgatt
    17581 tccgatgacc ggatttccat actcttcata attttttcac ccataaaaca ctaaaggggc
    17641 ttttaagccc cttctgtatg ctgttaatcg tcgtcctgtg gcagttccag aatcttgatc
    17701 gcgttcgaat ccaccacgcc accgcctaaa tatttctgcg tgaaaatttt gatgaagccc
    17761 ggctctgtga ggttgtccgg tctggtgcga acacctgttt cgtgatcaac aatgtagtaa
    17821 ccgcgcttga agtcacccag ggcaataacg ttatcaggca taaactccag atattcgacc
    17881 ggaaggccca gcaacgtatc aggatcaccc gcctgtaaac ggtcgcgcca gatgtaatca
    17941 ccgttcgcgt tcttcacctt ctgaagtttt gccgccgtcg tggagttaac cacccagacc
    18001 gcgtttttgc ggtatttttt acgtaatgca aatttcaggt cgatcagcgg gtccgcagat
    18061 gtccacgcca gagattcgga aggtttaatt acctgcaacg taccaaaatc acgctctttg
    18121 tcgttcttct ctgcacgggg tacggataaa aaaccttttg cttttttgtc accgtcgccc
    18181 acaaccagat cgctttcttc ggtttccgtg aaggtgtcgc caatctcacc cgtcagccat
    18241 gaaaggatgt ccacatcgga aaaatccacg atttcctgtg tggtgcgcgg gtacgcatag
    18301 accggataca gcttaatgct cacctcgtta atctgcgggg tgctggtctg ttcgcgtgcc
    18361 ttaccctctt caccgtggtt aacggtcaca ccgccagcgg aaacaagctg cttaaactcg
    18421 ttgctgctga tttttttcac ggtacagatg cggcgcatgg tggactcatc cgccagcatt
    18481 cgcatgattt cggtgttcag ttcggggata acggtataac caccatcagc gggaacgcct
    18541 gtacttaatg cgcgggtttc acctgtcaga atgtagctgc gtagttctgc ggggtcagtg
    18601 gtctggctgc ttttacctgg cttgctgcgc tcttcgtctg caatggcttc aaggcgggaa
    18661 atgtctttat cgagggattc agctttagcg cgtaattcgt caaattttgc gccctcagca
    18721 tcgttaagac tgcggttttc tttttcagcg ttctccagca tgtcgcgcat ctgattttta
    18781 atggcggttt tctgctggcg taattcgatt attctcggca taaaaaaaag tcctggggtt
    18841 aagtaaggaa ctccaggacg cggcaaacac tcaaccgttt ttcataagga aatcagcaat
    18901 cgcaccgatc gttttcccgc ctggtaatga atattggcga gcacattaac aggcgggaaa
    18961 gtggccccag cgtcctggca ccacgggcga gaataatcat gattcagttc gggtaaaata
    19021 tgccgatccg ctcagtgaac aacgtggaac aaccacgaac aaataattta caaaaaataa
    19081 caaaaagccg gattgctccg gctgtatgtg ctgtatgggt gctcagtctc tgatcccttt
    19141 cagaaattct atcaatgcat ctatctgttc aggatttacc gccagcattt caccggacag
    19201 agcacatctc acaaaaccat gctgatcctt ttcaatcagt gcgcccgtct ccaggaatgc
    19261 gcggtaatca ttgatgctca tcgtctccat gttgtcagca tggtatttat cacgctgttt
    19321 taatatctca tcaaatttca tcggcattgt tttttcctct gttgtgtctg tttgtttcag
    19381 atagtaacta tgcctgaccg tgacgaaaac ccggtaatgc gccataccgt ttcaactggt
    19441 gcaaaaaaag ccggatttct ccggctgttg attagctgtc tgggtaatta cgccatattt
    19501 catcgcttac accatctata cccatttcag cataagtgcg atctactgcc tttctcaggt
    19561 ctccgaagtt atccggcggc tccggtggct tctgtgcctt cctggaacat tccagccgtc
    19621 gcatcgtaac ctgatgccgt tccttgtctg tctccaccag cagcatgact tcaccccatc
    19681 gcgccgccgc cctccggtaa aagcctttcg cctcgagttc ttccgctatg cggtcatgta
    19741 ccatcgccac cccctcagaa cggaataccg tcaccgtaag ggtcatcgcc tcccgctggt
    19801 ggctgattac cctgtgtgcc tgtggttttg cgtctgttcc cgccaggacg tgccgcacgg
    19861 acactgatta cgctgtctgc aataacctga taaccctgcc gcgtttcccc gttctgtccg
    19921 gtccactggc tgacctgcat cgtgccggat acgctggcaa cgtcgccttt ttgatgttta
    19981 gccaggaagt cggcctgctt accaaatgcg atgaccgata gccataacgt cgcctgccca
    20041 tcctg
//
LOCUS       DAJVUK010000070        20025 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.070, whole genome shotgun sequence.
ACCESSION   DAJVUK010000070 DAJVUK010000000
VERSION     DAJVUK010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20025
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.070"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..451)
                     /locus_tag="OQQ57_002293"
     CDS             complement(<1..451)
                     /locus_tag="OQQ57_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HCS1957039.1"
                     /translation="MNNTDLIHLIKRFMRNEHKAVEEVIDSPLSEVANLIKILQSCQG
                     KVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGE
                     TAEILATLPSLKKMGNYLISFIRSHHSSLAISCDLSVEIPVKSEADNL"
     gene            complement(420..1628)
                     /locus_tag="OQQ57_002294"
     CDS             complement(420..1628)
                     /locus_tag="OQQ57_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000382418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PatB family C-S lyase"
                     /protein_id="HCS1957040.1"
                     /translation="MDIFNTSISRKGTYCTQWDFCEDRFGVKDVLPFSISDMDLPIPE
                     AIIRTLKKRLEHPILGYSRWQHDDYLNSIVNWYHQQYKTEIQPEWITYSPSVMYSISK
                     AIEILTLNGDNILIFTPVYNAFFDVIKHNGRNMLTTSLMKENGRGYVINWQDFELKIK
                     SAKMVLLCNPHNPTGTVWSEDDLHRIAACCARHNIWLCSDEIHSDFVFNHSFTSALTI
                     KDDKVVVFNSISKTFNVPALTGSYMISTDDNFNHKFRTISRYRDFVNSPSVLNVIATI
                     VAYNECEEWLKSLKVHIASNIQFTLQYLNENIPELIVWPAEGCYFSWVDCSALGYPFD
                     KFYRRLINEGRVGIMAGHVYGTEGEGYLRLNLACSREKLYMGLARLASVIKNINQEKE
                     NEQYGSYPSY"
     gene            complement(1628..3208)
                     /locus_tag="OQQ57_002295"
                     /pseudo
     CDS             complement(1628..3208)
                     /locus_tag="OQQ57_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000810568.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
     gene            complement(3240..3886)
                     /locus_tag="OQQ57_002296"
                     /pseudo
     CDS             complement(3240..3886)
                     /locus_tag="OQQ57_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000569552.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
     gene            complement(3909..4061)
                     /locus_tag="OQQ57_002297"
     CDS             complement(3909..4061)
                     /locus_tag="OQQ57_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001432072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HCS1957041.1"
                     /translation="MIIEKVMNNNCVQASVNGQEVIISGPGVGYNKNMVCRSLSILQT
                     GFLCQK"
     gene            complement(4321..5574)
                     /gene="amiC"
                     /locus_tag="OQQ57_002298"
     CDS             complement(4321..5574)
                     /gene="amiC"
                     /locus_tag="OQQ57_002298"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiC"
                     /protein_id="HCS1957042.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARRG"
     gene            5806..7137
                     /gene="argA"
                     /locus_tag="OQQ57_002299"
     CDS             5806..7137
                     /gene="argA"
                     /locus_tag="OQQ57_002299"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HCS1957043.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            complement(7199..9025)
                     /gene="recD"
                     /locus_tag="OQQ57_002300"
     CDS             complement(7199..9025)
                     /gene="recD"
                     /locus_tag="OQQ57_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HCS1957044.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     TLTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(9025..12567)
                     /gene="recB"
                     /locus_tag="OQQ57_002301"
     CDS             complement(9025..12567)
                     /gene="recB"
                     /locus_tag="OQQ57_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HCS1957045.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIATVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPKSVDLAEVERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPVLTEWITAVLQAPLNEKGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            complement(12560..15448)
                     /gene="ptrA"
                     /locus_tag="OQQ57_002302"
     CDS             complement(12560..15448)
                     /gene="ptrA"
                     /locus_tag="OQQ57_002302"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HCS1957046.1"
                     /translation="MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTQARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTTEAKLRAMKPDEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
     gene            complement(15624..18992)
                     /gene="recC"
                     /locus_tag="OQQ57_002303"
     CDS             complement(15624..18992)
                     /gene="recC"
                     /locus_tag="OQQ57_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HCS1957047.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LEHEDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRLWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGLSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
                     RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDNI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            complement(19005..19328)
                     /locus_tag="OQQ57_002304"
     CDS             complement(19005..19328)
                     /locus_tag="OQQ57_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCS1957048.1"
                     /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRLQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            complement(19313..19720)
                     /locus_tag="OQQ57_002305"
     CDS             complement(19313..19720)
                     /locus_tag="OQQ57_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HCS1957049.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSL
                     WRTGEVIDGNIVFSPSGWSDFCPLKERALCQLP"
     gene            complement(19717..>20025)
                     /locus_tag="OQQ57_002306"
     CDS             complement(19717..>20025)
                     /locus_tag="OQQ57_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCS1957050.1"
                     /translation="IIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEG
                     KGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL
                     "
BASE COUNT         5054 a         5346 c         4663 g         4962 t
ORIGIN      
        1 ctaaattatc cgcctcactt ttgacgggga tttcaacaga taaatcacaa cttatcgcaa
       61 gcgatgagtg atgactgcgg ataaaagaga tcaaataatt acccattttt ttcaaactag
      121 gcagtgtcgc caggatttcc gccgtctcac cactgtttga aataagaata acaacatcgt
      181 ctttcgccac catcccaagg tcgccgtgta ccgcttccgt accgtgaaca aaaaacgagg
      241 gagttccggt gctggcaaat gttgcagcaa gttttctggc aataatgcca gatttcccaa
      301 caccaataaa aacaactttt ccctggcaag attgtaatat tttaattaaa ttcgcgactt
      361 ccgaaagggg ggaatcaata acctcttcta ctgctttatg ttcgttacgc ataaaacgtt
      421 taataagatg gataagatcc gtattgttca ttttcttttt cctgattaat atttttaatt
      481 acactcgcaa ggcgcgcaag ccccatatat aatttttctc gactgcaggc cagattaaga
      541 cgcagatagc cctctccttc agtaccataa acatgccccg ccataatacc tactctccct
      601 tcgttaatta atcgacggta aaatttatca aagggataac caagggccga gcaatcaacc
      661 cacgaaaaat agcagccctc agctggccat acgatcaatt ccggaatatt ttcatttaaa
      721 tactgcaagg taaattgaat gttagaggca atatgtacct ttaatgactt taaccattct
      781 tcacattcat tataggcaac aatggtcgca attacattca gtactgatgg ggagtttacg
      841 aaatcgcgat acctcgatat cgttctgaac ttatgattaa aattatcgtc agttgaaatc
      901 atatatgatc cggttagcgc aggaacatta aatgttttcg aaatcgaatt aaacaccacc
      961 actttgtcat cttttattgt tagcgctgac gtgaaactat gattaaaaac aaaatcacta
     1021 tgtatttcat ctgaacataa ccaaatatta tgccttgcac agcatgctgc gattctgtga
     1081 agatcgtctt ccgaccagac cgttcctgtc gggttatgag gattacataa taacaccatc
     1141 ttcgcgcttt taattttaag ctcaaagtct tgccagttga taacgtagcc tctcccattt
     1201 tctttcatca aagaggttgt tagcatgttt cgaccattat gcttaatcac atcaaaaaat
     1261 gcgttataaa caggcgtgaa aatgagaata ttatctccat tcaatgtcaa tatttctatt
     1321 gccttagata ttgaatacat cacgcttggg ctataggtga tccattctgg ttgaatctct
     1381 gttttatatt gttgatgata ccaattgact atcgaattca gatagtcatc atgctgccaa
     1441 cgactgtacc ctaaaatcgg gtgttccaga cgttttttta atgttctgat gatagcttcc
     1501 ggtatcggaa gatccatatc tgaaatagag aatggtaata catcttttac accaaatctg
     1561 tcttcacaaa agtcccattg tgtgcaatat gttcctttac gagaaattga ggtattaaaa
     1621 atatccatca acatatcccc atgtaattat ccatatcccg acgtagggcg atgacttttg
     1681 taccgataat gacttgtaag gtattttgat caagtttcac aaccgcaatt cctccggccc
     1741 tttttattgc agcctcattt atcaatccca tatccgcgat agttaaacgc aaacgagtta
     1801 cacaattatc cagtgattta atattttctt taccacccag agccttaacc atttgctccg
     1861 ctgcctgcaa ctctgattta tcatgaactg ggatgttagc tattgcagtt tcttcgtgag
     1921 cgttcagcgt gacaggactg gactcttcac ggcctacagt catcaggtta aatttgagaa
     1981 tggtccaacg gaacacaaag taataaatga agaaataagc cacttcaaca cataccgcta
     2041 atggccatcc cgttcttgtg ccacgtaaga caccaaagct aataaattga atcagatcgc
     2101 cagtaaagcc catcttcacg cccatatatg gcagaaccat gttagccaat ccattcataa
     2161 aggcatggaa gacaaacaac agcgggctga caaataagaa cagaaattca atcggctcgc
     2221 tgacgccgcc aataattacc gtgagcacac cggaaatcag caatgctttg atagcccttc
     2281 tgttttgagc atgagcagtg cgatacatcg ccagcgcggc tccagccaga ccatactgaa
     2341 tcatcagttt gccctgctcc attttccccg ccaaatccag cggaatgacc gcattctctt
     2401 tgacgtatgc cataaacatg ttcagggtgc cgtaatactc ttcaccgcca atcactgccg
     2461 atccgccgat tggggtaaag cggaaaactg atgtcaccaa gtgatttaag ccaaaaggta
     2521 tcgtcacgcg ttcggcaaca gcatagaaga aataaccaac aggaccggaa gttgaaatcc
     2581 agtgaccaat gagcatgaaa agattgaaaa atggcggcca gataaaagga atgatcagac
     2641 caaatccact catcacaatc agtgtaatga taggcacaag gcgtgggcca ctataaaacc
     2701 ctaattattc aggaatacgt aagttaacga tctttttata catgctggcg actaataacc
     2761 ctgccacaat cccacccaac acgctggtat tgtaggactg gatcccgagt atgatggttt
     2821 gcccatgtgt cgacatttgg tcagcagcta ccaataagtc gtgctgttta agataaaagt
     2881 tcgttccaag atgcatcgcc ataaagccaa ttaagccaga aaaagcgcca taggctttat
     2941 catctttctc ttttaataat cccaaaggta tagctatcgc aaacaataca ggtaaattaa
     3001 cgaaggcaaa caaaccaagg ctaacaataa aatcaagtat ggttttaatt aacggaatag
     3061 ccaacactgg aatgaatttt gccatatcat cgctggctaa accacttccc agccctaaca
     3121 tcataccaca tacacttaac agagcgatgg gatacataaa tgccttcccc aggctctgaa
     3181 aaaaactcca ggatttcttt tgtttcatac tggttatctc atgaaaatgt tatgtataat
     3241 tagtccatta atactttgat gcgaatagaa agatatagtt tctcttccag aatcaaatca
     3301 tatttaaaag ttgcgtacag atatctttca atttcatgaa tggcacgttg taactgaaaa
     3361 tctttttcaa gaaactgctc atagatatca ccaatatttt tctgttttat tttttcatta
     3421 cataacacac gactagaaaa atatttaagg tgcatcataa atctggagta gttaaatgaa
     3481 cttctgtcca cccttctgtt ataaacaact tcaataagct ccgtgatttt ttgagacagc
     3541 tcaataatcc ttactgattc ataatcaact gaattttcat aattatttaa aatatgcaat
     3601 actataaaac caatctcatc atccggtagt tgaacgctaa attgctcatt aatgattgtt
     3661 aatgcatcac gacttattgc atactctgct ttgtacaacg ctttgatttc ctcaaggaaa
     3721 acattattaa tttgtatgcc tgagacgact cgggatattg cattcgaaat gtgatcagca
     3781 agaatcagta gtagcgatgg attgagtttt tttcgagatt actctccgca taatgcacta
     3841 tcttttcggc aacaaaaata tactcaatac ccacatgctc aatcaatttg tagagtttat
     3901 ttttttgctc atttctgaca taaaaatccg gtttgcagga tgctcaggga ccgacatacc
     3961 atatttttat tgtaaccaac gccaggccca gaaatgataa cctcctgtcc gttcaccgat
     4021 gcctgtacac aattattgtt catgactttt tcgatgatca ttccatggct ccccaaaaaa
     4081 aaggcaaggc atgtcagaag taataattac ttcaaacatt gccttgcctg atttaacagt
     4141 tgcaagataa ttaactaatg cgtatacctt acacggaatt gtgcttaata aaagagatga
     4201 cagacttatt ttttaagccg atattcaaat attcgacagc agtcacaaaa ccatcgttca
     4261 acatttatgt aaataatatt tattcaatga aacataaatt cattgaataa attaaaaaca
     4321 tcatcccctt ctcgccagcg tcgccccatc ggcaaaatac gctttaatcc ccgcaagaat
     4381 agactccgca acttcctgct ggaaagtcgc cgttttcagt ttacgctctt cctcaacgtt
     4441 actaataaac gccgtttcga ccagaatgga gggaatatct ggtgccttta gtacggcaaa
     4501 cccggcctgt tcaacttgat ttttatgcag cttgttgatt ttaccgagct tattcagtac
     4561 cgctttacca aacttcaggc tgtcggcaat ggtcagcgac tgcaccatat cgaacatggt
     4621 gtggtcgaca tagcggtcac cgcttttgct cacgccacca atcaagtccg aggcgttctg
     4681 ggtttgtgcc agatattttg ccgcagtact ggttgcacct ttggttgaga gcgcaaacac
     4741 agaggaaccg ctcggctgac gactggtaaa ggcgtcggca tggatagaga caaacaggtc
     4801 agcacgctgt ttctgggctt ttgctacgcg cacttgcaac ggaatgaaga tgtcttcatt
     4861 gcgcgtcatg tacaccttca tattgccctc tttctcgatc agagagcgca gacggcgagc
     4921 tatttgcaat accacgtctt tttcgcgcgt tttgtatttc cccaccgcac cggagtcttc
     4981 gccgccgtgg ccagggtcaa gcataataac aataggacga tcgcgccctg ctttacccgg
     5041 ttgtggacca ctttgtgctg gcggcacctg cttttcgagg tcgcctttgt tgtaatcctc
     5101 cagcagcgcc agcagcgggt cctgcatatc ctgtgcattg gccggataga ggtccatcac
     5161 cagacgctct ttaaacccgg cgaccggcgc aagggcaaac agctgcggtt ttacgttttg
     5221 ctttaattca aaaaccatcc gtacggtctg cgggtcaaat tgcccgacgc gcgccgactt
     5281 gatgaacggg tcgtctgcac gaatttgtgc cgccatcccc ttgagtaccg agttcaggtt
     5341 tacatcttcg atatccacca ccacgcgttc agggttactc aacgcgaact gcttatattt
     5401 cagctgacga tttgattcta ccgtcacacg ggtgtagctg gacgcaggcc agacgcgcac
     5461 cgccacgacc tggctgaccg cagccagact gacctgactt acgctcaata gccacatggc
     5521 acccgcgcct tgcagtaaac gacgacggct gattgcagtg ttggatcctg acatgcctct
     5581 cccgagcaaa agaaatctaa gctgtgtaac aagtaaacga ctaatttgac cggaaacttt
     5641 agcgaaagac gcataatctg tcatctaata aacggtaaac attcttttta tattcacggc
     5701 attactgata aaaaagtcgc tctcgcataa aatttacact tgcaccctgc gaaaaaacag
     5761 aataaaaata cactaattta gaataatcat gcaaaggggt gtgccgtggt aaaggaacgt
     5821 aaaaccgagc tggtcgaggg attccgccat tcggttccct atatcaatac ccaccgggga
     5881 aaaacgtttg tcatcatgct cggcggtgaa gccattgagc atgagaattt ctccagtatc
     5941 gttaatgata tcgggttgtt gcacagcctc ggcatccgtc tggtggtggt ctatggcgca
     6001 cgtccgcaga tcgacgcaaa tctggccgcg catcaccacg aaccgctgta tcacaagaat
     6061 atacgtgtga ccgacgccaa aacactggaa ctggtgaagc aggctgcggg aacattgcaa
     6121 ctggacatca ctgctcgcct gtcgatgagt ctcaataaca cgccgctaca gggcgcgcat
     6181 atcaacgtcg tcagtggcaa ttttattatt gcccagccgc tgggcgtcga tgacggcgtg
     6241 gattactgcc atagcgggcg tatccggcgg attgatgaag acgcgatcca tcgtcaactg
     6301 gacagcggtg caatagtgct aatggggccg gtcgctgttt cagtcactgg cgagagcttt
     6361 aatctgacct cggaagagat tgccactcaa ctggccatca aactgaaagc tgagaagatg
     6421 attggttttt gctcttcaca gggcgtcact aatgacgacg gtgatattgt ctcagaactt
     6481 ttccctaacg aagcgcaagc gcgggtagaa gcccaggaag agaaaggcga ttacaactcc
     6541 ggtacggtgc gctttttgcg tggcgcagtg aaagcctgcc gcagcggcgt gcgtcgctgt
     6601 catttaatca gttatcagga agatggcgcg ctgttgcaag agttgttctc acgcgacggt
     6661 atcggtacgc agattgtgat ggaaagcgcc gagcagattc gtcgcgcaac aatcaacgat
     6721 attggcggta ttctggagtt gattcgcccg ctggagcagc aaggtattct ggtgcgccgt
     6781 tctcgcgagc agctggagat ggaaatcgac aaattcacca ttattcagcg cgataacacg
     6841 actattgcct gcgccgcgct ctatccgttc ccggaagaga agattgggga aatggcctgt
     6901 gtggcagttc acccggatta ccgcagttca tcacggggcg aggttctgct ggaacgcatt
     6961 gccgctcagg cgaagcagag cggcttaagc aaattgtttg tgctgaccac gcgcagtatt
     7021 cactggttcc aggaacgtgg atttaccccg gtggatattg atttactgcc cgagagcaaa
     7081 aagcagttgt acaactacca gcgtaaatcc aaagtgttga tggcggattt agggtaagcg
     7141 atgaaaattg tcggatgcga catgcgtaac actcgtgcat cgcatccggc aattacgttt
     7201 attcccgcga actaaacaac gccgccagac cactgcgccg ctcagtacga gtggcgattg
     7261 ccgcacttaa tatacgctca tcggcataca gcgacagacg gcgacgcgcg cgggtcaccg
     7321 cggtgtatac cagctctcgc gttactaccg gcgtgcgttg gctcggtaaa atcaacgccg
     7381 catggtcgaa ctccgatccc tgcgatttat gtaccgtcat cgcccacgta gtttcgtgct
     7441 ctggcaagcg actcggttgc acagacttaa tattgccgtc cggcatcgca aaccagacgc
     7501 gcgtcccctg cccgcgatcc agcgcaatac cgatatcgcc attaaacaac ccaagcgcgc
     7561 tgtcattacg ggcaatcatc accggtcgac cttcgtacca acgagagtgc ggatgacgat
     7621 gaattttgcg cttctgttgc ataaactgct caattcgctc attcagtcca gccacgccaa
     7681 acggcccttc ccgcagggcg cacaaaagtt ggtactcatt gaacgcctga atgattaaat
     7741 ccggctcggc acgcgcttgc agcagatcca gataacgtcc ataacccgca agagcttcct
     7801 caagcatcgc aatataatct tcgccgctct gtaaaagtcg tttttcgata tcagtaaaat
     7861 cctgctgaaa aacggttttc actgccgttt tatcaccacg gttgatcgcc gcagctaact
     7921 gaccaatgcc agaatcgctg ccgaaacgat agcttttttg cagcaggcag agactgtcgc
     7981 gcaaagatgc cgcttctgtg ccggttcctg ccggaacgtg agtccccgtc aggcggctta
     8041 gctgcctggc acgctcggcg gtaaagcccg cgttggcata agcgcagata tcgcccagca
     8101 cagccccagc ctcaaccgag gccagttgat cacgatcgcc gagaaagatc actcgcgcat
     8161 gatcgggcaa ggcgtcgatc agtctcgaca tcataggcag atcgatcatt gacgcttcat
     8221 ctaccaccag cacatcaaga tgcagcgggt taccggcatg atgacgtaaa cgctggctac
     8281 ccggctgcgc gcccagcaat cggtgcaaag tgctggcatc ttccggaatg cgtttctttt
     8341 gttcatcggt cagcggtaac tgtcgcaaag ccttgccgag agattcggtt aagcgcgcgg
     8401 cagctttacc cgttggtgca gccagacgga tacggcagcg ttcgccgtcg gccatttgaa
     8461 ttaacgctgc cagcaacttc gccacggtgg tcgttttacc ggtgcctggg ccgccggaaa
     8521 tcaccgagat ccgccgcgtc agcgtcactg ccgctgcaac tttttgccag ttaatttcat
     8581 cgcttactgg aaaaagtttg tccagggttt gcgccagtag agcttcatca acctcaatgg
     8641 catgattcac ctcattgaag aagcgcgcta ccgtccgctc gttacaccac atgcgattca
     8701 aataaagacg atcgccacag aggatcatcg gcgtgggttc atctcccctg ctgaccgctt
     8761 gagaagccag caagcattct tcccaatttt gtagctcacc gatttcactg acacaggtcg
     8821 ccaacagcgg atgcgacgcc tcgttatttt ccagtcgtga aagcggcaaa cagacgtgtc
     8881 cctctccggc atcatgactt aacagtgccg ccgcgagggt gacggcagga tgttcatctc
     8941 ccgccacggt cagggcaaat tgcacatcca gcgggcgtag ctgtttgtgc tccacagctt
     9001 ccagtaattg cttttgcaat ttcattacgc ctcctccagg gtcataccgg caaacatctc
     9061 atccatcagg gcaatcaacc cggcgttggg tcgggttgtg taaatccctt gttgcggatg
     9121 ttctttatca acgccacgca ggaacagata gataacgccg ccaaagtgac gatcatagtc
     9181 gtaatcagca atgcgatggc gcagataacg atgcagcgcc agggtataaa gctgatattg
     9241 cagatcatag cggtgtgcct gcatcgctgc tgccatagcc tgttgggtgt aagccgaact
     9301 gtcttcaccc agccagttgg atttatagtc gagcaggtaa taacgccctt cgtggcggaa
     9361 tactaggtcg ataaagcctt ttaacatgcc gcgtacctgc atgaactcca gcggcgggca
     9421 gccagcggat agcggatcaa actggcgaat tagtgcatca agctggctgg cgatgagcgg
     9481 ttcgctaatc ggcaggtaaa actccatctc cacctgttta tcgcggtcgg aaagctgact
     9541 caggctaacc cccttttcat tgagaggtgc ctggaggaca gccgtgatcc actcggtcaa
     9601 caccggttcc cactgcgatt caaagccgcc gagttccagt ttttcctgta cccagttcgg
     9661 gtcaaccggc tgggtaaaat cgaggtcttc aaacaaactg tgcaagaatg tccccggtga
     9721 cgcaccgcgc gggaactgat gcggtgttaa cgtcggttct tcaacgacgc tgaccacgcc
     9781 tgcggcatca acatccagcc gtggcatcag atcctgagcg ataccgtgac cacgctgctg
     9841 caagccggag tagctggtga cacgccagtt atcgccgggc aatcgttgta gtgtcctcgc
     9901 attcagttct gcagttaaag catcattaac ctgccagggc tggttatcac cagtttgtgc
     9961 cgtttgccag gcaatatcat catcgcataa cgcttcaata caggtgcgaa gccctgccgc
    10021 atcttgcggt tccccttttt gcagcaaacg cccgagcgca ctttggtgga cgtcggtgtc
    10081 acctttttta tcgccacgac ggcgcaccag cggtgcaacg ccgagactgc aatgccaaac
    10141 cgaacgcgtc agcgccacgt aaagcaaacg cagatcttcc gccagacgtt cgacctccgc
    10201 gaggtcgacg ctttttggcg cagcattaag atccaaaact gcctcaaacg agtggcgatc
    10261 gtgataaaac gcctgatcct ggacgcggaa attggtaata aatggcaacc agaccagcgg
    10321 atattccagc cctttcgatt tatggatcgt gacaatctgc accagatgtt tatcactttc
    10381 gaggcgcatt tgttggctgg aggcattact gtctggctcg aggatatgtt gcgataacca
    10441 gcgtaccagc gcatgttcac tttccagctg cgttccggct tcttgtagca gttcgctgat
    10501 atgcaagata tcggtaagac gccgctcacc gcctgccgtt gccagcaagt tttctgcaat
    10561 gttacgcgcc gacatcagcg cccgcagcat cggcataacg ccacgtttgc gccagatttg
    10621 ccgataacca tcgaactctt caactaccgc atcccacgca tgttcgtcat tattcagcgt
    10681 ttcgatatcc agcgcgttca gccccatcat tgacgttgcc agcgcactac gcagggtgtt
    10741 ctcacgttcg ggcgtcatca ccgcctgcaa taaccaaagc atttcctgcg cttccagagt
    10801 ttcaaaaaca ctgtcgcggt tcgaaaggta aacggaaggg atttccagca acgttaaggc
    10861 atcgcgcacc tgggcggcct cctggcggct gcgcaccagc acactgatgt ccgaagcacg
    10921 caccggacgc gcgtcgtcgc cgttcatcag caacgcttcg ccccgctgtc cggcttgtag
    10981 ccagtcgcgg atttgcgcag cacatacctg cgccatggta ctttgatagt cgccaacgcc
    11041 gcagctttcg ccttccatca gccacatttt catcgcaggc tgcgtttcac ctttaaatac
    11101 aaaacgtaac gcctgatttt tcccggctga tttcactgga ataaacggta tttcgcgaaa
    11161 catgaacgcg tcatcagtct ggctgaaaag cttgttcaca ctgttcacca ttccaggtgc
    11221 ggagcgccag ttggtgtcta aagtgtagtg ggcgtgaact tcactacgcg ccttcatata
    11281 agtgaagata tccgcacccc ggaatgcata tatggcctgc ttcgggtcgc caatcagcaa
    11341 caatgcggtt tccggctgat ggtgccagat acggcgaaaa attcggtact gctgggggtc
    11401 ggtatcctga aattcatcga tcattgccac cgggaatcgc gtacggatcg ccgctgccaa
    11461 cacctcaccg ctttcgctac gcagcgcgga atcgagccga cttaacatgt catcaaaacc
    11521 caattcgcca cggcggcgtt tttcacgcgc tactgtttcg cggatctcag ccaatgcgcg
    11581 ggtgatcacc agatcgcgga tcgacaatgg ttctgcaagc agttgatcga tcgcctcaaa
    11641 cagtggatgt cgcggggttt cccccccagc tttcgtgcga tcttctaaga aacgctggga
    11701 gaatttttcc agcgactccg gcaactgata actgttggtc tcttcttctg cccaggcgct
    11761 gatcttgtcg atccatttag cctgattgct acggttaaac ttgcgtcgat caataccaga
    11821 agattcgatc agcgcatcca gttcacccac tgcgtcgcgc cactgctgtt ttaccgtagc
    11881 aatacgcgcc acaatttgcg cgtggcggga agccagcgtt tcatcatcgg gcggcggtgc
    11941 tttgataacc ggcgcttcgc cttgcagata acgattaata tcgcgcagca acgcctgcgg
    12001 ccctttccag gtttcaaaga cgacctgggc tatttcacgc ggcagcgggt agcagtggcg
    12061 acgccagaaa tcggcgcagg cctggtaacg tagcagagac tcatcttcaa tcagctgctg
    12121 ctcaaacagc atgccggatt caaaggcatt caggttgagc atgcgctggc aaaaaccgtg
    12181 aatagtaaag actgccgctt catccatctg ccgttcggct aacaacaacc actgcgcggc
    12241 ttgcgcttta tcgtcgatct cttccagcag acgttcgtac agtggattgt cggtagtttc
    12301 acgcagacag gcgatgcgca actcatggat attgctacgg atacgaccac gcaattctgc
    12361 cgtggcagcc tcggtaaagg tgaccaccag cagttcttca acggtcagcg ggcggggaaa
    12421 ggcggcggaa ccgcctagtc caagtaacag gcgcaaatag agcgccgcaa tcgtaaaggt
    12481 tttgcctgtg ccggcagagg cttcaatcag gcgctcaccc tgtaagggca agcgcaaagg
    12541 atctagtgtc tcggcgacat cactcattct tttcactcat caggggcatt gtttgctgca
    12601 acgcgctgac gttctcccac actttccagc cttcagggtg tacatattcg gctttcccgt
    12661 tctggctgcc ggaaatctgc gacagaatag ccatgccttg cggctcgacc accgcctgat
    12721 ggaagaaatc agcaagtttt tgcggcgtca gcagttttat ctgggccacg attttatcac
    12781 gcgaatcgaa gcgcatattg ccgcgatcga aatctttact taacttcgat gcttcttcgc
    12841 cgagcgtttg cggtgcctgc agcatctggg taattaccgc ctgctggatt tgcgcaaact
    12901 catctggctt catcgctcgc aattttgcct ctgtggttgg gaaaaacgcc ttgtaacgct
    12961 cccacaagaa tgaaggctgt ttatcattgc tttgcaaaag gaagcccatg ccccactgac
    13021 gccccacgct cattggaaac gcaaacacgg catagcccaa ttgttcttcg gtacgcaact
    13081 gattgtagaa ccacggctgt acgatctgcc ccaacagaga gctataggct gagctggtgt
    13141 attcatcgta gccagtcggt acaaataccg ctgccagtgc ggagtcggtg ctgttaccgg
    13201 ctttttcaaa gatgacggat tgttttttat cgaccactac atctttgttt cgacaccact
    13261 ctgaaccatc agcgcccaac tgtttttgca catcgcgtgc ctgcgttgtt gcctgggcct
    13321 cggtcatgtt gccgataacc ataaactctg gtcgagcccc tgattttaag gcgtcgcgat
    13381 aggccagcac ctctttcaac gtaatggagg gcaaaatttt acgccgttca tctcgcgaga
    13441 agtacggcac ttgcgagagc atctgcgcgg gcataatcgc ctgctcaaac gctttaccct
    13501 tttctgcgga atccatcatc tggttatacc aagacttcgc ctgctcaagc tgatcttccg
    13561 tagcggtata gctaaagtac ccctcgagca atgcctggaa cagctgcggc agacgctggg
    13621 tgtaaccatt agcattaacc ataaggccgt tgttagcgtt ggtggaaaaa cttatgccac
    13681 caaccgacgc ctggttgctt aactgatcaa gcgccagccc tgcgagataa tcattgagcg
    13741 caaacatcac ctgattgcgg gcgctgtcca tggctttcgg attacgcaaa atcaggctga
    13801 catcagcttt gggttcgctg gaaaaataac ggcttggcgc atacaccacg cgcagattcg
    13861 actcatcaac aatcagctct ggatggtcat atttcttctc tgacttaatc agcgagaaat
    13921 cgtcaggaat ataggggtta agctccggta aggagagcgc aatattggca gctttttgct
    13981 gccagtcagc gaaagtttgt tcgctgattt tatcgacctg atacggcgca tcgacaaaat
    14041 aagccgtttt attgtgcggc tctttcgggc tgatatacca gatacgcgca ttctgcggcg
    14101 tcatcatcgc cagacgttct tttactgctt tagcatcgta ccgatcggca atattgactg
    14161 catccagcgt atgctcaacc ggaacgcgaa tcatggtatc tgccagccat tcgacgtaat
    14221 ccatatcacg ggtgatcgac ggataacgga agtcgatatc cagcacattc gccagttcat
    14281 cgaagtattg tttatcaatg cctttttcac gtaacagatt gagatagcta aaaattgccg
    14341 ccacaacctg atcgcgatta gccaggcctt tatcggttaa agacgcagag atcgctaata
    14401 cgccgctgtt gccgttgacg ataggatcgg agttggcgct aatgccctca actaatccct
    14461 gcttttgcag ccagtcggaa agtgtacctg ggctgcgatt accaatcaga taggtaatca
    14521 attcatccgt tttactacgg aacttcgctg agttgttatc gatgcgaaac tcaacgcgca
    14581 gaactttacg cggcagtgcc gggacgtaat gaatgataat gcccttttgc gcgtcggtga
    14641 ctaccggcac ggtgatttcc ggttttttgc tctctttgtt cggcacgcga ccaaaggtgt
    14701 ccgccgccat ttttgccaac tccggcagcg gtttattgct gtaaataacc gccttcatca
    14761 gattggcgga atagtacttc tcgtggaaat ctttcagcgc ctgctgcacc ggattaccag
    14821 gtttatcgct taaagtttcg aggttaccac cagaaaactt tgaaccgggg tgtgccgggt
    14881 taatggtttc tgcgctgacc tgtgccatgc gcatcccgtc acgcgtacgc gccatggtta
    14941 attcagcgtt caccgcatta cgctcacgtt cggcatattt cttgtcgagc aaaggttcag
    15001 caatagcatc ggccaggcgg tctaccgcac caggcaaggc gtcgttctca acttccagat
    15061 agaaagccgt gcgatacggc gcagtgctgg cattgtgact accgccgtgc attttgagat
    15121 attcggccag actgtcagcc tgcgggtact ttttcgaccc catcagactc atatgttcaa
    15181 ggtaatgtgc cagcccctgg tacgcctcgg gatcttccag cgacccaacg ggcaccacca
    15241 gcgccgagag cgatttaact gcctgcggat cagaaaccag caagaccacc ataccgttat
    15301 ccagacgtat agcctgatac tggcggttat ctttatcact tttacggatg gtttcctgaa
    15361 tcggctgcca tcccgtttct gcctgactta agggtgccca aagggcaact aacaacaata
    15421 atgctttgaa ccaagtgctg cggggcattc acggacctca taatcaactt aattttctgt
    15481 ccagattcaa cacgttaacg caaatcatct gccagaattt aatcttgtgc tgcacgagtc
    15541 agcctatgtt tatataacca tcagtccgtg actggtgcgc atcataaagt aagcggatag
    15601 attgcgcaat ttttatacag cactcatgac tgattaaagc gaaacagcgg taacaggaaa
    15661 cgttgcgact gttcaacgat ggcctccatt gtctctggtg ttaattgccg ccagagcctt
    15721 tgataccaga tattatcacc ttcaccacgc accatcatgt tgccttcgta agcctgaagg
    15781 aatttcgtac gggctttttg caacgtggaa tcgtcatcca gcatggcatc gttttgcgcg
    15841 tcataacagg tttttagcca cgcgccgcca ctttcaggta acaccagcaa tggcgcggac
    15901 atcccttcac gatacccctc aatcagttgt gagaggtaat gcaaagcctg ttcggctgca
    15961 agcggcggaa aacgccactc gccgtctttg cgtagaaaaa ggcgactttc accattacca
    16021 ccgctggcac agtagacaag gtgttccagc caaagttgca ttccctgcgc cacacttaat
    16081 aaagagggac gccagcgcaa caggccatcc ggctgcacct gcggcaacca gccagttatc
    16141 tgcacaccgt tgcaggcgag atcaatttcc atactctgcc ccggctggcg acaggcaatg
    16201 actctgtcgg caagctgctg catctcctgg cactgagttt cccagaaaat ttcaccaaaa
    16261 gcgccatacg gtaaatcccc tgccgcccgg aagcgacgga acaagcgttc ggcatcatcc
    16321 tgctcaacca gtgcattcaa taactgctga ttgatttgat aacggctaag cccttccaga
    16381 ataaatggct cggtgtcggg gatttcgctg tcttcggtac ggaagttcac ctgcaaacgc
    16441 atctggaaaa atgcccgcac cggatgtgcc cagaatcgtt gtagcgtttc cagcggcacg
    16501 gtttccggta aggtaaacgg cagcggctga acaaattcag aatgtgcttt accagcctgg
    16561 ctggccgcag gtagccattc acgagcatag ctttgtcgtt cgcctggctg gtagttttgt
    16621 ggatcaaacg gcatccgggt atggaggcag gtaagatgcg cttttaccct tgcctcgctt
    16681 tcatcacagt tgagcgcttc atcgcccggt agataatgac tttgcccgat gtagtcgatc
    16741 agttcctgca ccagtaccga cgggaaacgt tcactgttat cctgaatgga aagcccgata
    16801 taactgatat agagtttttg ctgcgcggaa attaacgctt ccaggaacag gtagcggtcg
    16861 tcatcgcgac ggctacggtc gccacgcttc ggtttctggc tcatcaggtc aaagcccaat
    16921 ggcgcaagct gacgtggata aacgccgtcg ttcattccca gcaggcaaac cactttgaac
    16981 ggaattgaac gcattggcat cagagtacaa atgttaaccg gtccggcgag aaaacgctgg
    17041 ctgatacgtt cttgatccag acgctgtgcc agttcatcac gcaatagtga cagcggcacc
    17101 gcgtcgccat actgcgcacc taaaccttcg gcgataatcg cctgccattg ttgttcgatc
    17161 agcgtcatcg ccgcttcggt ttccgcatcc ggcaggaaga aggcgttgag catatcgcga
    17221 caaaccggca accactcttc tagcggacgc tcctgtgcca gcccgcgacg ccagatgttt
    17281 agctgcatta gcagtgaagc cagatgcccc accagttctg caattaagcc gctcgactca
    17341 tcataaggta gaaccgattg ccactcgccc tgcgcgctct ccatcgcgta gcccagcaac
    17401 atacgcgtca ggccaaatcg ccaggtgtgt tgtccggtgg cggggagttc cagctcgcga
    17461 acgttgtcgt catctatccc ccaacgaatg ccggattcgt tgacccacag gcgtaaataa
    17521 cgcagccctt cttcggtgat gtcaaaccgc gccgccagca ccggcacatc cagtaatgcc
    17581 agcacgtctt ccgacacaaa gcggctgtct ggcaacgata acaggctgat aaacgcttcc
    17641 agtaccggat gcgactgccg cgcccgacgg tcggaaatgg cgtaaggcag gtaacgatcc
    17701 gcaggtgcgc taccaaacac agcctgaata aacggactgt agctgtcgat atcagccacc
    17761 atcacgatga tgtcgcgcgg agtaagtgtc gggtcttctt ccagcatcgc cagcaggcga
    17821 tcgtgcaaaa cttcaacttc acgctgcggg ctatggcaaa cgtggaaggt gatactgcta
    17881 tccagtggat caagcgggcg tttgttatcg ctacgggaaa actcttcgat gttcacacca
    17941 gcaacggcac ggttttccag ttccagaatg tcagactgaa tgttatgcag caggttatct
    18001 ggcgtgacat cgacaaaggc gtccagctcc tggctgctct ccaggtcaga aaggagataa
    18061 atgtagtcgc gcccaagctt cccccatgag gccagcagcg ggttgccgac atcctgttca
    18121 ccatcgctgt taaagagctg tccggcattt tcgctatcgc gaaatagcgg caattcgcga
    18181 tcttcaaaac tgtgtcgacg ctgacgagtc agcagtttcg ccagataagc aggatcttta
    18241 atatcgcccc agtaataacg gcaggggttg gtaaacagga gatggatttc aatatgttta
    18301 cccagcgcct ggagcgcctg gagataaaca ggcggtaacg cggaaatacc gcatataaag
    18361 acgcgcgaag gtaaccccgg cgggcaggtc gtcgcggact ccagcgtttc gataaagcgc
    18421 tgatagagat tcgcgcggtg ccagcgcggt tgtccgagtt catgggtata ttccaccagc
    18481 gccttccaca acggcgcttg ccaggcctgt gcttctccca gcccttcaac caaatgtcct
    18541 gtttcccatt gtgccagcca ctccgggcga tagaccagat actggtcaaa caggtccgcc
    18601 gcttttgagg aaagctggaa cagttttcgc ttgtcgctat cgtcagtcag ataatgccgc
    18661 aacagggtaa agtcttcgtg ctccaacagt tgcggcagca gagtcatcag tttccagctc
    18721 atgctctgtt tgttaaaggc gctctctttg gggatctccg gtaacacccg gacgaacata
    18781 tcccagataa agctcgcagg cagcggaaaa tcaatgtttg ccgcaatacc aaacttttgc
    18841 gacagggtca tttgcagcca ctgtgccata ccggtacttt gcaccagaat catctctggt
    18901 tcgaaaggat cgtccagccg ttcgcgttcg acaataaact ccatcaacgc ttccagcacg
    18961 tccagacgat tggaatggta gacccttaac atagcggctc ctgactactg acgattcggg
    19021 caatgcaggc gggtcatctc gccttctctg cccccgggtg aaactagcgt aacgctgatg
    19081 ctgacacatc ccgcctgcga tgtctgcaat cggttgacct gccagttagc tggtggcgaa
    19141 atcgcgcgca gttgcgtttg ctgccagcca tgccgccaga gctgttggta ctggtttctg
    19201 ctggcaagac tgttcattaa tgttcgctgg aaacccgata acgcagtgac aatcatcacc
    19261 atcaacacca tcgccaacat tacctccggc aggctaaagc cttgttgatt cttcagggaa
    19321 gctgacataa cgccctctct ttcagcggac aaaaatcgct ccagccgctt ggcgaaaaaa
    19381 caatgtttcc atcaatgact tcgcctgttc gccacaacga aacgccttca taaccggcaa
    19441 tcaataaggc ttcattatct gccagtaaac gcaaacaaac ctgggcatcg gtttcagcgt
    19501 actgcgagca ctgaactgct ggctgcgtct gccaggagtg catttttccc cacgccagcg
    19561 ccgactgaac gatggcctgg cggcgcaatg actgactttc catgctcacg cgagaggcaa
    19621 aactgcgatc ctgttggctc attccttgta atagcaaact acccaaaacc agcagcatca
    19681 ggaccagagc cagtgacgaa acaccctttt cgcggttcac aggttgaatc ctgtcacgct
    19741 atagctggca ttcaccacgg tttgcggttc agacttactg gcagcacgca tattaaccgt
    19801 caacaccggc gagaagccgc tgacatcctg acgtacgacc tgaaaagtgt cgataatgat
    19861 ggcatccgga ttagtgactt tatcccagcc cttaccttca caggatgtcg caccgcgtag
    19921 cgtttccagc acatgctcct tcagacgaaa tccaatctgg tcggactctt ttaccggttc
    19981 gcgatcccag ataccgttac tgttcgcatc ccactgcaca atgat
//
LOCUS       DAJVUK010000071        19876 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.071, whole genome shotgun sequence.
ACCESSION   DAJVUK010000071 DAJVUK010000000
VERSION     DAJVUK010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19876
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.071"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            54..830
                     /gene="eutC"
                     /locus_tag="OQQ57_002307"
     CDS             54..830
                     /gene="eutC"
                     /locus_tag="OQQ57_002307"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HCS1957051.1"
                     /translation="MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTG
                     RAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDM
                     GRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVG
                     TPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEAD
                     RTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR"
     gene            840..1499
                     /gene="eutL"
                     /locus_tag="OQQ57_002308"
     CDS             840..1499
                     /gene="eutL"
                     /locus_tag="OQQ57_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HCS1957052.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            1512..2012
                     /gene="eutK"
                     /locus_tag="OQQ57_002309"
     CDS             1512..2012
                     /gene="eutK"
                     /locus_tag="OQQ57_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HCS1957053.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            2058..3110
                     /gene="eutR"
                     /locus_tag="OQQ57_002310"
     CDS             2058..3110
                     /gene="eutR"
                     /locus_tag="OQQ57_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HCS1957054.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEDAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFVTDYQQLF
                     AEKPSLTLHQRMREWG"
     gene            complement(3116..4015)
                     /gene="hemF"
                     /locus_tag="OQQ57_002311"
     CDS             complement(3116..4015)
                     /gene="hemF"
                     /locus_tag="OQQ57_002311"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HCS1957055.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(4019..4888)
                     /gene="amiA"
                     /locus_tag="OQQ57_002312"
     CDS             complement(4019..4888)
                     /gene="amiA"
                     /locus_tag="OQQ57_002312"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HCS1957056.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            5102..5527
                     /locus_tag="OQQ57_002313"
     CDS             5102..5527
                     /locus_tag="OQQ57_002313"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311332.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HCS1957057.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADMLSLGKRLIEDEEY"
     gene            5514..5963
                     /locus_tag="OQQ57_002314"
     CDS             5514..5963
                     /locus_tag="OQQ57_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HCS1957058.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
     gene            6170..6745
                     /locus_tag="OQQ57_002315"
     CDS             6170..6745
                     /locus_tag="OQQ57_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HCS1957059.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            6841..7740
                     /gene="yfeX"
                     /locus_tag="OQQ57_002316"
     CDS             6841..7740
                     /gene="yfeX"
                     /locus_tag="OQQ57_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HCS1957060.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(7798..9102)
                     /gene="pbp4b"
                     /locus_tag="OQQ57_002317"
                     /pseudo
     CDS             complement(7798..9102)
                     /gene="pbp4b"
                     /locus_tag="OQQ57_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
     gene            complement(9107..10531)
                     /gene="murP"
                     /locus_tag="OQQ57_002318"
     CDS             complement(9107..10531)
                     /gene="murP"
                     /locus_tag="OQQ57_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
                     /protein_id="HCS1957061.1"
                     /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
                     PNIKTLEGVKSVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL
                     KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
                     FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
                     FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
                     PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
                     LFPILSMAGAGQVGAALALYWRSQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
                     PFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG
                     GILVAWVCGFIFTTLFGCRNVNLD"
     gene            complement(10535..11431)
                     /gene="murQ"
                     /locus_tag="OQQ57_002319"
     CDS             complement(10535..11431)
                     /gene="murQ"
                     /locus_tag="OQQ57_002319"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HCS1957062.1"
                     /translation="MQLEKMITEGSNAASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            11595..12452
                     /gene="murR"
                     /locus_tag="OQQ57_002320"
     CDS             11595..12452
                     /gene="murR"
                     /locus_tag="OQQ57_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HCS1957063.1"
                     /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNTTALHLHSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCVEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVASLKMIQR
                     SSELTQRLK"
     gene            12581..13372
                     /gene="ucpA"
                     /locus_tag="OQQ57_002321"
     CDS             12581..13372
                     /gene="ucpA"
                     /locus_tag="OQQ57_002321"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HCS1957064.1"
                     /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            13676..14692
                     /gene="cysP"
                     /locus_tag="OQQ57_002322"
     CDS             13676..14692
                     /gene="cysP"
                     /locus_tag="OQQ57_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate/sulfate ABC transporter
                     substrate-binding protein CysP"
                     /protein_id="HCS1957065.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKTDVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
                     QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            14692..15525
                     /gene="cysT"
                     /locus_tag="OQQ57_002323"
     CDS             14692..15525
                     /gene="cysT"
                     /locus_tag="OQQ57_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HCS1957066.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            15525..16400
                     /gene="cysW"
                     /locus_tag="OQQ57_002324"
     CDS             15525..16400
                     /gene="cysW"
                     /locus_tag="OQQ57_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HCS1957067.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            16390..17487
                     /gene="cysA"
                     /locus_tag="OQQ57_002325"
     CDS             16390..17487
                     /gene="cysA"
                     /locus_tag="OQQ57_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HCS1957068.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
                     DAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGQVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHARLYNGDERIETRDEELALAQSA"
     gene            17621..18532
                     /gene="cysM"
                     /locus_tag="OQQ57_002326"
     CDS             17621..18532
                     /gene="cysM"
                     /locus_tag="OQQ57_002326"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HCS1957069.1"
                     /translation="MSTLEQTIGNTPLIKLQRMGPNNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(18535..18903)
                     /locus_tag="OQQ57_002327"
     CDS             complement(18535..18903)
                     /locus_tag="OQQ57_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HCS1957070.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            19008..19859
                     /gene="pdxK"
                     /locus_tag="OQQ57_002328"
                     /gene_synonym="thiJ"
     CDS             19008..19859
                     /gene="pdxK"
                     /locus_tag="OQQ57_002328"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HCS1957071.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
                     ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
                     LPPLAEA"
BASE COUNT         4575 a         5043 c         5609 g         4649 t
ORIGIN      
        1 cggcccccgc gctgtcagaa gcaaagtgca ccaccaccac ctgtgcggca ccggtgacct
       61 cggaaagctg cgcgctggat ttaggttctg cggaagcaaa agcgtggatt ggtgttgaaa
      121 acccgcatcg cgcagacgta ttaacagaac tgcgtcgcag caccgtggcc cgcgtttgta
      181 ccggtcgtgc cggtccgcgt ccgcgtaccc aggcgttgct gcgtttcctg gccgatcact
      241 ctcgttcgaa agataccgta ctgaaagaag tgccggaaga gtgggtgaaa gcgcagggct
      301 tgctggaagt acgctccgaa attagcgaca aaaatctcta cctgactcgc ccggatatgg
      361 gccgccgcct gtgtgcagaa gctgttgaag cgctgaaagc acagtgtgtt gctaatccgg
      421 acgtacaggt cgttatttct gatggcctgt caactgatgc catcaccgtg aactacgaag
      481 agatcctgcc gccgctgatg gcgggcctga aacaggccgg gctgaaagtc ggcacgccat
      541 tctttgttcg ttatggtcgc gtgaagattg aagatcagat cggtgagatc ctcggcgcga
      601 aagtggtgat cctgctggtg ggggaacgtc cggggttggg tcagtcagaa agcctctcct
      661 gttacgccgt ttactcgccg cgtatggcga ccaccgttga ggccgatcgc acctgcatct
      721 ctaacattca ccagggcggc acgccgccgg ttgaagccgc agccgtcatt gtggatttgg
      781 cgaaacgtat gctggagcag aaagcatccg gcatcaacat gacccgataa ggaggcatca
      841 tgccagcttt agatttgatt cgaccgtcgg taaccgccat gcgggtgatt gcctccgtta
      901 acgctgaatt tgcgcgtgaa ctaaaattgc cgccgcatat tcgtagcctc gggctgattt
      961 ctgctgattc cgatgacgtc acctacattg cggctgacga agcgaccaag caggcgatgg
     1021 tcgaagtggt atatggccgc tcgctgtatg cgggagcagc acacggaccg tcaccgactg
     1081 ccggtgaagt gctgattatg cttggtgggc caaacccggc ggaagtgcgt gctggtctgg
     1141 atgcgatggt tgcgcatatt gaaaatggcg ctgctttcca gtgggctaat gacgcagaaa
     1201 acaccgcatt cctggcacat gtagtttcgc gtaccggttc ttatctctca tcaaccgccg
     1261 ggatcacgct tggcgatccg atggcgtatc tggtggcacc gccgctggaa gcgacctacg
     1321 gcattgatgc agcgttgaaa tctgccgacg tacagctggt gacctatgtc ccgccaccgt
     1381 ctgaaaccaa ctactcggca gcatttttaa ccggtagcca ggccgcgtgt aaagcagcct
     1441 gtaacgcctt taccgatgca gtgctggaaa tcgcgcgtaa tccaatccag cgtgcgtaac
     1501 ggaggttgcc gatgatcaat gcactgggat tgctggaagt ggacggcatg gtcgccgcga
     1561 tagatgcagc ggatgccatg ctcaaagcag ctaacgttcg tctgctcagt cacgaagtgc
     1621 ttgaccctgg tcgcttaacg ctggtggtgg aaggcgatct ggcggcgggt cgtgcggcgc
     1681 tggacgcagg ttgtgctgcc gcgatgcgta ccgggcgtgt catcagccgc aaggagatcg
     1741 gtcggccaga cgatgacacc cagtggctgg ttactggctt taaccgccag ccgaagcaac
     1801 ccgtaaggga acccgacgcg ccagttatcg tcgcggaatc tgctgacgag ttgttggcgc
     1861 tgttaacatc agtacgtcag ggaatgacgg caggagaagt ggctgcccac tttggctggc
     1921 cgctggaaaa agccagaaat gcgctcgaac agctcttttc tgccgggacg ttacgtaaac
     1981 gcagtagtcg ttatcgtctc aagccccatt aacctgtcgg aggtgctggg tgtcctacaa
     2041 cacccggcat taacatcatg aaaaagaccc gtacagccaa tttgcaccat ctttatcatg
     2101 aacccttacc cgaaaacctg aagctcacgc cgaaggtcga agtggataat gttcatcaac
     2161 gacagacaac ggatgtctat gaacatgctt taacgattac cgcctggcag cagatttacg
     2221 atcagctgca tccgggcaag tttcatggtg aatttacgga aattctactc gatgatattc
     2281 aggtttttcg tgaatacacc ggtctggcgc tgcgtcagtc gtgcctggtc tggccgaact
     2341 cgttctggtt tggcattccg gcgacgcgcg gtgagcaggg atttatcggt tcgcaatgtc
     2401 tgggaagcgc ggaaatcgcc acccgccctg gtggcactga atttgaactg agcacgccgg
     2461 atgattacac gatcctgggc gtggtgcttt ctgaagatgt catcacccgg caggctaact
     2521 ttttgcataa cccggatcgg gtattacata tgctgcgtag ccagtcggcg ctggaagtga
     2581 aagagcagca taaagccgcg ctgtggggct ttgtccaaca ggcgctggcg acgttttgcg
     2641 agaacccgga aaatctccat cagcctgcag tgcgaaaagt gctgggggat aatttgctaa
     2701 tggcgatggg ggcgatgctg gaagacgcgc aaccaatggt gacggcggaa agcatcagtc
     2761 atcagagtta ccgtagatta ctttcccgcg cccgtgaata tgtgctggaa aatatgtctg
     2821 agccggtgac ggtgctggac ttgtgtaatc aactgcatgt cagtcgccgc acgctacaaa
     2881 acgcgtttca cgctatttta ggcattggcc caaacgcgtg gctgaaacgc attcgcctga
     2941 acgccgtacg ccgcgaactg ataagcccgt ggtcgcaaag cacaacggta aaagacgccg
     3001 ccatgcagtg gggattctgg catctggggc aatttgtcac ggattaccag cagctgtttg
     3061 ccgagaagcc gtcgttgacg ttgcatcagc ggatgcggga atgggggtga gggagttaca
     3121 cccaatccct gaccttaata aactcactta acgccgcttc tgggctgcca tcttttggct
     3181 gataatcata ctcccagcgt accagtggcg gcattgacat caggatcgac tcggtgcgcc
     3241 cgccagtttg caggccaaac agagtgccgc gatcccagac cagattgaac tcgacataac
     3301 gaccgcgacg gtagagctga aaattgcgct cgcgctcgcc gtaggccatt gctttacgtc
     3361 gctctacaat tggtaaataa gcgtcggtgt agcctttgcc taccgcctgc ataaaggcaa
     3421 aacagtggtc gaaatctggc gtgttcagat catcaaagaa cagcccgcca ataccgcgct
     3481 gttcgttgcg atgtttgagg tagaagtaat cgtcgcacca ctttttgtaa cggggataaa
     3541 cgtcttcacc aaatggcagg cacaggtcac gggcggtgcg gtgccagtga atggcgtctt
     3601 cttcaaaacc atagaaaggg gttaaatcga agccgccgcc aaaccaccag acgggctctg
     3661 cacccggttt ttcggcaata aaaaaacgca cattcgcgtg gctggtggga acatacgggt
     3721 tatgcggatg cactaccagt gaaacgccca tcgcctcgaa actgcgcccg gcaagttccg
     3781 ggcgatgagc ggtggcggaa gcaggcatcg cctcgccgtg gacgtgagaa aagttgacgc
     3841 ctgcctgttc gaaaacacca ccattacgca acacccgact acgcccgccg ccgccagctt
     3901 cgcgctgcca actatcttcg acaaattctg cgccatcgac ggcggtcagc tgctgacaaa
     3961 tcgtatcctg aaggttgagc agaaactgtt taacctggtg tgcgtcgggt ttcataactt
     4021 atcgcttttt cgaatgtgct ttctggttgt cgaaccagtg gaaataactg atcacgcctt
     4081 cagcaatcgc tgtggcgatt ttctgacgaa acgccgccgt gcctaacagc cgctcttctt
     4141 ccgggttggt gataaacgag gtttccacca gcaccgaagg aaccgacggc gatttcaaca
     4201 ccacaaacgc ggcttgttcg gtgttgcggc tgtgcagttt atgcaccggc ttaatctttt
     4261 tcagaatatg cgagccaagc gtcaggctgt ttttaatagt atcggtttgc accagatcaa
     4321 acagcacttg ctgcaatagg tgatccttgt cagtcgcctt tttaccggca acttcatcgg
     4381 cgcggttttc gcgttcagac aggtatttcg ccattgcgct acttgcccca cggttagaga
     4441 gggcaaatac cgaagcaccg gcagctttcg ggttggtaaa gccatcggca tgaattgaca
     4501 taaacagatc tgcgccatgt ttatgggcga tttcaacgcg atcgtaaagt gggataaacg
     4561 tatcgccaga acgcgttaaa cgcgcatcaa tcccatgatt acgcaaaatg gaacggacgt
     4621 ttttagcaat cgccagcacc acatgttttt ctttcgaacc gttgcgtccg atcgctccgg
     4681 tatcaattcc gccgtggcct ggatcgagaa caacgacacg tttgccgcca gattttttgg
     4741 ctttcggctt gctgtgtccg ttgctggttt ttaaaggttc gtctttggcg atggcttgcg
     4801 acattcctga caacgtcagg gcagccaaac cggctttcag cacctggcgg cgcgaagtga
     4861 gtgtttttag tggtttaaaa gtgctcatac ggcctgagtt gtaataataa agttccagat
     4921 gttatatcgt atcgcgtaat ccgttacgac ggtttgatgt tgagaattgt tttacttttc
     4981 atttcaatag ttgacaactc cccattatgc cactttttca accgattttc gtcagatatt
     5041 ggctaattct accgttcacg ccataatcag ccttttaacc cgcaaaaagg taacgaatac
     5101 catggagata cgcgtatttc gccaggaaga tttcgaagag gtcatcaccc tttgggagcg
     5161 ttgcgacttg ctgcgtccgt ggaacgatcc ggaaatggac atcgagcgta agatgaacca
     5221 tgacgtcagt ttgtttttgg tcgctgaggt gaacggtgaa gtggtcggaa cggtgatggg
     5281 cggttatgac gggcatcgcg ggtctgctta ttatcttggc gtgcatccag agtttcgtgg
     5341 gcgtgggatt gccaatgcgt tgcttaatcg gctggagaaa aagctgattg ctcgtggctg
     5401 cccgaaaatt cagatcaatg tgccggaaga taacgacatg gtgctcggaa tgtatgaacg
     5461 cctgggatat gaacacgccg acatgctgag tctgggtaag cgtttgattg aagatgaaga
     5521 gtactgagtt ccatcctgtc cattatgatg cgcacggacg cctgcgttta cccttgctct
     5581 tctggcttgt gctattgctt caggcgcgaa cctgggtgct gtttatcatt gccggtgcgt
     5641 cgcgcgagca gggtactgcg ctgctaaatc tgttttatcc cgatcacgat aatttctggc
     5701 tggggttgat tcccggtatt ccggcggtgc tggcgttttt gttgagcggt cggcgggctt
     5761 cgtttcctcg cacctggcat gtgctctatt ttctgttgct gttggcgcag gtggttttac
     5821 tttgctggca accgtggctg tggctgaacg gtgaatccgt tagcggtatc ggtctggcgc
     5881 tggtagtggc ggatattgtg gcgttaatct ggctgctgac caatcgacgt ttacgcgctt
     5941 gttttaatga agaaaaagaa taacgcagag gtgcgctttg tttatgccgg atgcggcgtg
     6001 aacgccttat ccggcctaca aaacatcgaa aattcaatat attgcaggag aaagtaggcc
     6061 tgataagcgt agcgcatcag gcaattttgt gtttgtcatc aacctttaac ggcacttttt
     6121 ggtgaatttg cactccaagc aacgttattg aataaccaaa ggaagtgaca tgaaatcgct
     6181 gcgtttaatg ttatgcgcta tgccgttgat gctgaccggc tgttccacga tgtcgtcagt
     6241 taactggtcg gctgctaacc cgtggaactg gtttggatcg tccaccaaag tgagcgagca
     6301 gggtgtgggt gaattaacgg cgtccacacc actgcaagaa caagccattg ctgatgcgct
     6361 tgatggcgat tatcgcctgc gcagcggaat gaaaaccgcg aacggcaacg tggtgcgctt
     6421 ttttgaagtg atgaaaggcg acaacgtggc gatggtgatt aacggcgatc aaggcacgat
     6481 cagtcgcatt gacgtgctgg atagcgatat tcctgctgac accggtgtta aaatcggtac
     6541 accgtttagc gacctttaca gcaaagcatt tggcaattgc caaaaagctg atggtgatga
     6601 taatcgtgcc gtcgaatgta aagccgaagg cagtcaacat attagctacc agttcagagg
     6661 ggaatggcgt ggtcctgaag ggttaatgcc ttcggacgat accctgaaaa actggaaagt
     6721 cagtaaaatt atctggcggc gttaatttgc gtctgaacaa accgccgccg cgaaaaaaca
     6781 cgtaaaatag cgctcaacaa tgccacggat tgcgtggcat tcttattttc aggaggaaca
     6841 atgtctcagg ttcagagtgg cattttgcca gaacattgcc gcgcggcgat ttggatcgaa
     6901 gccaacgtga aaggggaagt tgacgccctg cgtgcggcca gtaaaacatt tgccgacaaa
     6961 ctggcaactt ttgaagcgaa attcccggac gcgcatcttg gtgcggtggt tgcctttggt
     7021 aacaacacct ggcgcgctct gagcggcggc gttggggcag aagagctgaa agattttccg
     7081 ggctacggta aaggccttgc gccgacgacc cagttcgatg tgttgatcca cattctttct
     7141 ctgcgtcacg acgtaaactt ctctgtcgct caggcggcga tggaagcctt tggtgactgc
     7201 attgaagtga aagaagagat ccacggcttc cgttgggtgg aagagcgtga cctgagcggc
     7261 tttgttgacg gtacagaaaa cccggcgggt gaagagacgc gccgcgaagt ggcggttatc
     7321 aaagacggcg tggatgccgg cggcagctat gtgtttgtgc agcgttggga gcacaacctg
     7381 aagcagctca accggatgag cgttcacgat caggagatga tgatcgggcg caccaaagag
     7441 gccaacgaag agattgacgg cgacgaacgt ccggaaacct ctcacctcac ccgcgttgat
     7501 ctgaaagaag atggcaaagg gctgaagatt gttcgccaga gcctgccgta cggcaccgcc
     7561 agtggcactc acggtctgta cttctgcgcc tactgcgcgc gtctgcataa cattgagcag
     7621 caactgctga gcatgtttgg cgataccgat ggtaagcgtg atgcgatgtt gcgcttcacc
     7681 aaaccggtaa ccggcggcta ttacttcgcg ccgtcgctgg acaagctgat ggcgctgtaa
     7741 gcgtttctga ttctatgatt aaaggccagc cagtaacaaa actgactggc ctttttatta
     7801 cttttgcttc aacgccgcat acacctgatc aactacccaa ccataagttg caatcggtaa
     7861 ctgaccgctt tcgaacatat tgggattttt ttgtggatcg gcaactggcg aatggggctt
     7921 gttgcttaac atcacaatcg ccatatgatt gaccggatcg ataacggtta ctgtcccggt
     7981 ccagccagtg tgaccgtagg tttgcgggct tgccagcgtg ccaaacgtcg gcgtcatggt
     8041 ggcattacca ttcacgcgcc agccgaggcc aaaagtggca tcttccttag agctggtggt
     8101 gaacatcttc accgtttccg cactgaacag ctgcacatcg ccatagcccc cgccgttcag
     8161 catcgtttgc attaacaccg caatatcgcc ggtattggaa aacaaacctg cgtgcccgga
     8221 aacgccgccc atcgaataaa aggctttttc atcgtgcacc tgaccccaga gagtggaggt
     8281 gcggatattc gggaaatgga tcacgccatc gcgggtattg ccgttcaatt ccgtggcggc
     8341 aatttgttgc ggtttaaagc ctttcagcag cgggttaaat accgtatgtg tcaggccgag
     8401 cgggcgataa atcgactctt caacatagcg gtcaagcggc tgaccggtaa ccgactcgac
     8461 gataaatcca agcagcatat aatcgacatc gctgtagata tgtttgctgc cgggctgata
     8521 ttccagcggc gtgcgcttga tcatctccag cgtctggcct ttatcctagg aatataacgc
     8581 gcccgcgacc gctttattcg ggtattgcgg atctgccggg aaaccgccgc tgtgatgcag
     8641 caggtcagaa atccgcaggg tgtttttgcc tttaatggtg tcatttggac tatcggcaaa
     8701 ccccggaata tatttcgcaa tccgatcgtc aggatgcagt ttgccttcgc tcatcagctt
     8761 ttgcagggcg aagttcgtgg cgtacatttt ggtgtttgag gccaggtcat acagcgtccc
     8821 ggtggtggct ttgacaggct gttccatcaa cacgctgcca tcgtactttt tcgccgctcc
     8881 ccaggctttg cgatacacaa tctgattatc tttaatgatc agcaggttta cgccgggata
     8941 accggcatca acttgctggc taatccagcg atccatctgg ttaagccgtt tgacgttaaa
     9001 ccctgctttc tctggcgagc tttctgtcag aacagggtat tttgcggcgc tgacgctaca
     9061 actaacagcc agcagagaaa gatagagcat tgtccgtttc atgatatcag tccagattga
     9121 cgttacggca gccaaagagc gtggtgaaaa taaacccgca aacccatgcc accagaatcc
     9181 cgccagcata aaccgccatg gccggaagga tgccttgtgc ggaagtcatc agcggcagcg
     9241 ctaccagacc agacggccca aaggcgctgt ttaagcccat cggcagaccc caccaggcta
     9301 tcaggccgat aaacaaaccg cccgccgcac cgcctaaaca ggcggtgaca aacggcttca
     9361 tgcggggcag ggtgacaccg taaatcagcg gttcaccaac gcccagcagg ccgggaataa
     9421 tcgccccgcg tacctgactg cgtagcgcac tgtgcggttg cgaccgccag tagagtgcca
     9481 gcgccgcgcc cacctggccc gcgcctgcca ttgaaaggat gggaaataag ctgttgaatc
     9541 cctggctgtc cattaacgcg aggtaaacag gaataaagcc ctgatgcacg ccaaatacca
     9601 cggcgatcag gaacagcccg gctaaaaccg cacaaccgaa cggattactg ttcaggtgca
     9661 taaacagcca tgacatacct tcgaataacc agccacccag cggcataatg atcaggtacg
     9721 caagcgtagc ggtgatcagc agggtgatta acgaggtcag cagcatgtcg agatcgtccg
     9781 gcataaagcg gcgcaccatg ccttcaatgc gggcgcaggc ccacgcggca atcagcacgc
     9841 cgataatatt gccgcgcgga tcgatgggca gaccaaagaa atcgtgaaaa ccggcgtagt
     9901 aaccggtggt tgcagcgggg ttataaccga gcaaaaagag tgcggcaata attgcgccat
     9961 tgacgcccgt gccgccaaat gcctgggcgg cgttatagcc caccagaatc accaggaagg
    10021 tgaacaaacc tttgctgaac accttcataa aattcagcgc gtcgggtagc gtgccctgag
    10081 catctgccgg aacgtgcatc accgtggcaa ttaacgtcgc tatccccagc agcagaccgg
    10141 cggcaataaa accggggatc agcggcgtga agatggtggc gaatttggcg agaaattgtt
    10201 gcacgccgga ggtttgtttg gcttttaact gacgtttgtt ctgggcggcg atttctgcgg
    10261 catcctgtac cggtgcctcg cccagcagct cgctcatcgc ttttgcggca cgatgcgctt
    10321 taccaggtcc aaaaacgacc tgcacctggt cgctggtcaa aatgacgctc ttcacgcctt
    10381 ccagcgtttt gatattggga tcaaccagtg aactgtcatg tacacccaga cgcaggcgcg
    10441 tcatacagtt accacaactg gcgatatttc ccggtccgcc gacacgggta agaatggtgt
    10501 tcagaagttc actgctgatc tctttggcca tgggttattc cttgtctaaa acctgacgaa
    10561 taaagccgcc gtgttgatcc aggcgttttt tagcttctgc ggcatcgaga tttttcagca
    10621 ccatcacaat ggccgtttta cagttgcgct cgcaggcaat taacgccgct tccgcttgtt
    10681 cggcattaca tccggtggcg tttttaacga tattgacctg gcgcacatgc agtttttcgt
    10741 tggtggcgac cacatcgacc ataaggttgc cgaacacttt gccggattta atcatcagcc
    10801 cggtggaaag catattgagc accagtttct gcgctgtacc tgctttcatc cgcgaagaac
    10861 cggtaacaac ttcggcacct acaatcggtg taatggcaaa ctcagcggtg gttgaaacgg
    10921 cgctccccgg attacaggaa attcccactg tgcggcagcc gagctggcgt gcgtattcca
    10981 gtccggcaat cacatacggc gtgcgaccgc tggcagcaat gccaaccacc acatcctgtg
    11041 ccgttaaatt aatatttttc agatcattaa caccgccttc ccggctatct tccgcgcctt
    11101 ccaccgcgtg ctgaatggca tattcgccgc cagcaatcaa accaaccacc agacccggtt
    11161 tcacgccgta ggtgggcgga cattcgctgg catccagaat ccccagacga ccggatgttc
    11221 ccgcaccgag gtaaatcaga cgcccgccgc cgcttacctg ggcgtggata acatcgatcg
    11281 ccgcggcgat atccggcagt acgcgctcaa cggcaagcgg tacggtttta tcttcatcgt
    11341 tgataatccg gcacatttcc agcgttgata cgcggtcaat ttcagccgag gcggcgttcg
    11401 agccttcagt aatcatcttt tcaagttgca tcggtggtga ccttactatt tacgatcaaa
    11461 taattgcaga tgtatggaat catatatcct gaattgacag acttaaagga atcattgagt
    11521 ctacactcgc agagtgtgaa gagcgtcata agaacttaag cggaatttat gctgccagcc
    11581 caggagagtg gaagatgttg tacctgacga aaataagcaa tgcggggagt gaattcaccg
    11641 aaaacgagca aaaaatcgct gactttctgc aggccaacgt gagtgagctg caatccgttt
    11701 cttcacggca gatggcgaaa cagctcggca ttagccagtc gagcatagtg aaatttgccc
    11761 aaaaactcgg cgcgcaagga tttactgaat tgcgtatggc gttaataggc gaatacagtg
    11821 ctagccggga gaaaacgaat accacggcgc tgcacctgca cagttcgatt accagtgatg
    11881 attcgctgga agtgattgcc cgcaaattga atcgcgaaaa agagctggcg ctggagcaaa
    11941 cctgtgcgtt gttcgactac gcgcggctgc aaaaaatcat tgaggtcatc agtaaagcac
    12001 cgtttatcca gataacgggc ctgggcggat cggcgctggt ggggcgcgat ctgtcgttca
    12061 aactgatgaa aattggctat cgcgtggcct gcgaagccga cacgcacgta caagccaccg
    12121 tttcccaggc gttgaaaaaa ggcgatgtac aaatcgctat ctcttacagc ggtagtaaaa
    12181 aagagattgt cttgtgcgta gaagcggcac gaaagcaggg ggcaacggtg attgccatta
    12241 cttctctggc tgactctccg ctgcggcggc tggcgcattt cacgctcgat accgtttccg
    12301 gtgaaaccga atggcgtagc tcgtcgatgt ctacccgcac ggcgcaaaat tctgttaccg
    12361 atttactgtt tgttggtctt gtgcaactca atgatgtggc gtcattgaaa atgattcagc
    12421 gcagcagtga gctaacacaa cgcctgaaat gatgcataaa gcagcgactg gattgagatt
    12481 ttcctgaatt agtgagctga tccgcagcaa tattttgttt atcctgtatt ttcagaggga
    12541 atggagtgta acgctctgta ttaacaagga gagcattaaa atgggtaaac tcacgggcaa
    12601 gacagcactg attacgggcg cattgcaggg aattggcgaa ggaattgcca gaacttttgc
    12661 acgtcatggc gcgaacctaa tcttgctgga tatctcccct gagatcgaaa agctggcgga
    12721 cgaactgtgt ggtcgtggtc atcgctgtac ggcggttgtc gccgatgtgc gtgacccggc
    12781 gtcggtagcc gcagctatca aacgcgcgaa ggaaaaagaa gggcgcattg atatcctggt
    12841 gaataacgca ggcgtttgtc gtctgggcag tttcctcgat atgagcgatg acgatcgcga
    12901 tttccatatt gatatcaata ttaaaggcgt atggaacgtc acgaaggcgg tgctgccgga
    12961 gatgattgcg cgcaaagatg gtcgcattgt gatgatgtct tcagtcactg gtgatatggt
    13021 ggccgatcct ggcgaaacgg cgtacgcctt aacgaaagcg gcgattgttg gcctgacaaa
    13081 atcgctggcg gtggagtacg cgcagtctgg tattcgcgtt aacgccattt gcccgggata
    13141 cgtgcgcaca ccaatggcgg aaagcattgc ccgccagtcg aacccggaag atccagagtc
    13201 ggtgctgact gaaatggcga aagcaatccc gatgcgtcgc ctcgccgatc cgctggaagt
    13261 cggcgaactg gcggccttcc tcgcatcgga tgaatccagc tatttaaccg gtacacagaa
    13321 tgtgattgat ggcggcagca cactgccgga gacggttagc gtcggtatct gattcacctc
    13381 tgtttcctcc ctgcatgtgt ggggaggatt tcgtcttgaa ctaagttcac caggctattt
    13441 tatttgtcat tttggccccg ggcagtgctc gaaatactca cgtactatgt gtacgctccg
    13501 gtttctccgc gctgtccgtg tccaaactgc ccgcaacaat tacgcctgtt gaaccaagtt
    13561 cttattccct ttttaacttc caaatcacca aacggtatat aaaaccgtta ctcctttcac
    13621 gtccgttata aatatgatgg ctattagaaa gtcattaaat ttataagggt gcgcaatggc
    13681 cgttaactta ctgaaaaaga actcactcgc gctggtcgct tctctgctgc tggcgggcca
    13741 tgtacaggca acggaactgc tgaacagttc ttatgacgtc tcccgcgagc tgtttgccgc
    13801 cctgaatccg ccgtttgaac agcaatgggc aaaagataac ggcggcgaca aactgacgat
    13861 aaaacaatct catgccgggt catcaaaaca ggcgctggca attttgcagg gcttaaaaac
    13921 cgacgttgtc acttataacc aggtgaccga cgtacaaatt ctgcacgaca aaggcaagct
    13981 gatcccggct gactggcagt cgcgcctgcc gaataatagc tcgccgttct actccaccat
    14041 gggcttcctg gtgcgtaagg gcaacccgaa gaatatccac gactggaacg acctggtgcg
    14101 ctccgacgtg aagctgattt tcccgaaccc gaaaacgtcg ggtaacgcgc gttataccta
    14161 tctggcggca tggggcgcag cggataaagc tgacggtggc gacaaagcca aaaccgaaca
    14221 gtttatgacc cagttcctga aaaacgttga agtgttcgat actggcggtc gtggcgcgac
    14281 caccactttt gccgagcgcg gcctgggcga tgtactgatc agcttcgagt cggaagtgaa
    14341 caacatccgt aaacagtatg aagcgcaagg ctttgaagtg gtgattccga aaaccaacat
    14401 tctggcggaa ttcccggtgg cgtgggtcga taaaaacgtg caggccaacg gtacggaaaa
    14461 agcagcaaaa gcctacctga actggctcta cagcccgcag gcgcagacca tcatcaccga
    14521 ctattactac cgcgtaaata acccggaagt catggacaaa ctgaaagata aattcccgca
    14581 gaccgagctg ttccgcgtgg aagacaaatt tggctcctgg ccggaagtga tgaaaaccca
    14641 cttcaccagc ggcggcgagt tagacaagct gttagcggcg gggcgtaact gatgtttgca
    14701 gtttcatcaa gacgcgtgct gccgggcttt accttaagcc tcggcaccag tctgctgttt
    14761 gtgtgcctga ttttgctgct gccgctctcc gcgctggtga tgcagctggc tcagatgagc
    14821 tgggcgcagt actgggaggt gatcaccaac ccacaagtgg tcgcggccta caaagtgacg
    14881 ctgctgtcgg cgtttgtggc atcgattttt aacggcgttt tcggtctgct gatggcgtgg
    14941 attttaacac gttatcgctt tccgggccgc acgctgcttg atgcgctgat ggatttaccc
    15001 tttgcgctgc caacggcagt cgccggttta acgctggcct cgctcttttc cgtaaacggt
    15061 ttttacggtg aatggctggc gaagtttgat atcaaagtca cctatacctg gcttggtatt
    15121 gcggtggcga tggcctttac cagcattccg tttgtggtgc gtaccgtgca gccggtgctg
    15181 gaagagttag gcccagaata tgaagaagcg gcggaaacgc ttggtgcaac gcgctggcag
    15241 agtttctgca aagtggtgct gccggaactt tctccagcgc tggtggcggg cgtggcgttg
    15301 tcgtttaccc gtagtcttgg tgagtttggc gcggtgatat ttatcgccgg gaacatcgct
    15361 tggaagacgg aagtgacgtc gctgatgatt tttgtgcgct tgcaggagtt tgattacccg
    15421 gcggcgagcg cgattgcttc ggtgatcctc gcggcatccc tgctgctgct gttctcaatt
    15481 aacactctgc aaagtcgctt tggtcggcgt gtggtaggtc attaatggcg gaagttaccc
    15541 aattgaagcg ttatgacgcg cgcccgatta actggggcaa atggtttctg attggcatcg
    15601 ggatgctggt atcggcgttc atcctgctgg tgccgatgat ttatatcttc gtacaggcgt
    15661 tcagcaaagg gctgatgccg gttttacaga atctggccga tccggacatg ctgcacgcca
    15721 tttggctgac ggtgatgatt gcgctgattg ccgtaccggt gaacctggtg ttcggcattc
    15781 tgctggcgtg gctggtaacg cgctttaact tccccggacg ccagttactg ctgacgctac
    15841 tggacattcc gtttgccgta tcgccggtag ttgccggtct ggtgtatctg ctgttctacg
    15901 gctctaacgg tccgctgggc ggctggctgg atgaacataa tttgcagatt atgttctcct
    15961 ggccgggaat ggtgctggtc accatctttg tgacctgtcc ttttgtggtg cgcgagctgg
    16021 tgccggtgat gttaagccag ggcagccagg aagacgaagc ggcgattttg cttggcgcgt
    16081 ctggctggca gatgttccgt cgcgtcacat tgccgaacat tcgctgggcg ctgctgtatg
    16141 gtgtggtgct aaccaacgcc cgcgcgattg gcgagtttgg tgcggtgtcg gtggtttccg
    16201 gctcgattcg cggcgaaaca ctttcgctgc cgttacagat tgaattgctg gagcaggact
    16261 acaacaccgt cggctccttt accgccgccg cgctgttgac gctgatggcg attatcaccc
    16321 tgtttttaaa gagtatgttg cagtggcgtc tggagaatca ggaaaaacgc gcgcagcagg
    16381 aggagcatca tgagcattga gattgccaat attaagaagt cgtttggtcg cacccaggtg
    16441 ctgaacgata tctcactgga tattccttct ggtcagatgg tcgcgctgct ggggccgtcc
    16501 ggttccggaa aaaccacgct gctgcgcatt attgccgggc tggagcatca aaccagcggg
    16561 catattcgct tccacggtac cgacgtgagc cgcctgcacg cacgcgatcg taaagtcggt
    16621 ttcgtgttcc agcattacgc gctgttccgt catatgacgg tgttcgacaa tatcgctttt
    16681 ggcctgacgg tgctgccacg tcgcgagcgc ccgaatgccg cagccatcaa agcgaaagtg
    16741 acaaaattgc tggagatggt ccagcttgcg catctggcgg atcgttatcc ggcacagctt
    16801 tccggcggcc agaaacagcg cgtggcgctg gcgcgcgcgc tggctgttga accgcaaatt
    16861 ctcctgcttg atgaaccgtt tggcgcgctg gatgcgcagg tgcgtaaaga gctgcgtcgc
    16921 tggctgcgtc aactgcatga agagctgaaa ttcaccagcg tgttcgtgac ccacgaccag
    16981 gaagaagcga ccgaagtagc tgatcgtgta gtggtgatga gccagggcaa tatcgagcag
    17041 gctgatgcgc cggaccaggt atggcgcgaa ccagcgaccc gatttgtgct cgaatttatg
    17101 ggcgaagtga accgcctgca gggaaccatt cgcggcgggc agttccatgt tggcgcacat
    17161 cgctggccgc tggggtatac gcctgcgtat caggggcagg tggatctctt cctgcgcccg
    17221 tgggaagtgg atatcagccg ccgtaccagt ctcgattcgc cgctgccggt acaggtactg
    17281 gaagccagcc cgaaaggtca ctacacccaa ttagtggtgc agccgctggg gtggtacaac
    17341 gaaccgctga cggtcgtgat gcatggcgac gatgccccgc agcgtggcga gcgtttattc
    17401 gttggtctgc aacatgcgcg gctgtataac ggcgacgagc gtatcgaaac ccgagatgag
    17461 gaacttgctc tcgcacaaag cgcctgatag gttgagtgaa tgttaaacgc ccggaggcgc
    17521 ttcccgcgat ccgggctttt taatggcaag gtttgtaacc tgtagacctg ataagacgcg
    17581 caagcgtcgc atcaggcaac accacgtatg gatagagatc gtgagtacat tagaacaaac
    17641 aataggcaat acgcctctga taaagttgca gcgaatgggg ccgaataacg gcagtgaagt
    17701 ctggttgaaa ctggaaggca ataacccggc aggttcggtg aaagatcgtg cggcactttc
    17761 gatgatcgtc gaggcggaaa agcgcgggga aattaaaccg ggtgatgtgt taatcgaagc
    17821 caccagtggt aacaccggca ttgcgctggc aatgattgcc gcgcttaaag gctatcgcat
    17881 gaaattgctg atgcccgaca acatgagcca ggaacgccgt gcggcgatgc gtgcttatgg
    17941 tgcggaactg attcttgtca ccaaagagca gggcatggaa ggtgcgcgcg atctggcgct
    18001 ggagatggcg aatcgtggcg aaggaaagct gctcgatcag ttcaataatc ccgataaccc
    18061 ttacgcccat tacaccacta ccgggccgga aatctggcag caaaccggcg ggcgcattac
    18121 ccattttgtc tccagcatgg gaacaaccgg cactatcacc ggcgtttcac gctttatgcg
    18181 cgaacaatcc aaaccggtga ccattgtcgg cctgcagccg gaagaaggca gcagtattcc
    18241 cggcattcgc cgctggcctg cggaatatct gccggggatt ttcaacgctt ctctggtgga
    18301 tgaggtgctg gatattcatc agcgcgatgc ggaaaacacc atgcgcgaac tggcggtgcg
    18361 ggaaggaata ttctgtggcg tcagctcagg cggcgcggtt gctggagcac tgcgggtggc
    18421 aaaagctaac cctggtgcgg tggtggtagc gatcatctgc gatcgtggcg atcgctacct
    18481 ctccaccgga gtgtttgggg aagagcattt tagccagggg gcggggattt aagattattg
    18541 cgcaggcacc gttttatccg tctgcgcaat tagcgcatgt aaaaaaggct gtgcgttctc
    18601 atcgctctta ccggggatct tcacaatata cggcttcccg gtaatcgatg acgacgaagc
    18661 aaccttatca ataaactgct cggcagtgtc aatgcggtta cgggtattgc cgagcttcag
    18721 acgcagatga gaaaccgctt catcgcaggt atgttcatca ccgttgcgca caaatatcaa
    18781 atcctttttc tgtgataatc cctccagcat ggcgttgatg cgggcttctt catgggcagt
    18841 taacttcgcg taagcgggga gtgtcattag tagtgtaatg accagacaaa tgattttctt
    18901 cattgaatta ccttatcctt gttttgtaat agccgatttg actgccagaa tcaggtaaag
    18961 tttcggttgg aatacgatga ggatcatcgg caaggagaaa aaattaaatg agtagtttgt
    19021 tgttgtttaa cgataagagc agggcgctgc aggcggatat cgtcgccgtg cagtcgcagg
    19081 tggtttacgg cagcgtgggc aacagcattg ccgtgcctgc tatcaaacag aacggtctga
    19141 atgtttttgc cgtgccgacg gtattgctga gcaatacgcc gcattatgac actttctacg
    19201 gtggtgcgat tccggatgaa tggtttagcg gttatttgcg tgcgcttcag gagcgtgatg
    19261 cgctgcgcca gctgcgcgct gtaaccacgg gctatatggg aacggcatcg caaatcaaaa
    19321 tccttgccga gtggctgact gcgctacgca aagaccatcc tgacctattg atcatggtcg
    19381 atccggtgat tggcgatatt gatagcggaa tttatgtcaa acctgacctt cccgaggcgt
    19441 atcgacaata tttactgccg ctggcgcagg gaattacccc caatatcttt gagctggaaa
    19501 tcctgaccgg taaaaattgc cgcgatctcg acagtgccat tgctgccgca aaaagtctgc
    19561 tttcagacac attaaaatgg gtggtgatta ccagcgcctc cggtaatgaa gaaaatcagg
    19621 agatgcaggt ggtggtggtc agtgccgaca gcgtgaatgt catttcccat tcacgggtaa
    19681 aaaccgacct gaaagggact ggcgacctgt tttgtgctca gcttatcagt ggtttgctga
    19741 aagggaaggc gttaaacgat gcggtgcacc gtgcggggtt gcgcgtactg gaagtgatgc
    19801 gctacaccca gcagcatgag agcgatgaat tgattttgcc gccgctggcg gaagcataaa
    19861 aaatggcgcc gatggg
//
LOCUS       DAJVUK010000072        19607 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.072, whole genome shotgun sequence.
ACCESSION   DAJVUK010000072 DAJVUK010000000
VERSION     DAJVUK010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19607
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.072"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..826
                     /gene="wecH"
                     /locus_tag="OQQ57_002329"
     CDS             <1..826
                     /gene="wecH"
                     /locus_tag="OQQ57_002329"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="O-acetyltransferase WecH"
                     /protein_id="HCS1957072.1"
                     /translation="FMISGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSIN
                     MELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNT
                     VPQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFI
                     ISRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSL
                     GIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
     gene            complement(868..1305)
                     /locus_tag="OQQ57_002330"
     CDS             complement(868..1305)
                     /locus_tag="OQQ57_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaB family inner membrane protein"
                     /protein_id="HCS1957073.1"
                     /translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
                     FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
                     EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
     gene            complement(1351..1692)
                     /locus_tag="OQQ57_002331"
     CDS             complement(1351..1692)
                     /locus_tag="OQQ57_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957074.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVC
                     LFGQMRLFRSV"
     gene            complement(1857..2048)
                     /locus_tag="OQQ57_002332"
     CDS             complement(1857..2048)
                     /locus_tag="OQQ57_002332"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957075.1"
                     /translation="MGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAY
                     QPRRETFRRLYQQLLPLMA"
     gene            complement(1981..3300)
                     /gene="xylB"
                     /locus_tag="OQQ57_002333"
     CDS             complement(1981..3300)
                     /gene="xylB"
                     /locus_tag="OQQ57_002333"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005077809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HCS1957076.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
                     AWGMATVPVVAGGGDNAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCH
                     ALPQRWHLMSVMLSAASCLDWVAKLTGLCNVPALIAAAQQADESAEPVWFLPYLSGER
                     TPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGG
                     GARSEYWRQMLADISGQQLDYRTGGCGASTGRSKAGADCGESREIAH"
     gene            complement(3417..4694)
                     /gene="xylA"
                     /locus_tag="OQQ57_002334"
     CDS             complement(3417..4694)
                     /gene="xylA"
                     /locus_tag="OQQ57_002334"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HCS1957077.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVSFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
                     ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGR"
     gene            5060..6031
                     /gene="xylF"
                     /locus_tag="OQQ57_002335"
     CDS             5060..6031
                     /gene="xylF"
                     /locus_tag="OQQ57_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1957078.1"
                     /translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
                     DIFVKKAESLGAKVFVQSANGNGETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
                     KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
                     AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALTANNNKIDAVVASNDATAGG
                     AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN
                     GQEPKADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
     gene            6109..7650
                     /gene="xylG"
                     /locus_tag="OQQ57_002336"
     CDS             6109..7650
                     /gene="xylG"
                     /locus_tag="OQQ57_002336"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HCS1957079.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHV
                     EKQSV"
     gene            7628..8809
                     /gene="xylH"
                     /locus_tag="OQQ57_002337"
     CDS             7628..8809
                     /gene="xylH"
                     /locus_tag="OQQ57_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
                     /protein_id="HCS1957080.1"
                     /translation="MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFT
                     WTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICD
                     VWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT
                     TVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVV
                     GRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLE
                     AARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGG
                     TSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRR
                     S"
     gene            8887..10065
                     /gene="xylR"
                     /locus_tag="OQQ57_002338"
     CDS             8887..10065
                     /gene="xylR"
                     /locus_tag="OQQ57_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator XylR"
                     /protein_id="HCS1957081.1"
                     /translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
                     NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
                     TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
                     HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNREVML
                     "
     gene            complement(10173..10997)
                     /locus_tag="OQQ57_002339"
     CDS             complement(10173..10997)
                     /locus_tag="OQQ57_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HCS1957082.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSRSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            11317..13347
                     /gene="malS"
                     /locus_tag="OQQ57_002340"
     CDS             11317..13347
                     /gene="malS"
                     /locus_tag="OQQ57_002340"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HCS1957083.1"
                     /translation="MKLASCFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPK
                     GTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGKYTLQIDTRSGTPT
                     LMISIQNAAEPVANLVRECPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQIT
                     LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMA
                     EIGTFHGGDLRGLINKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
                     TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
                     SGDEVKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
                     GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKVIEGFTPRDYLTHWLSQWVR
                     DYGIDGFRVDTAKHVELPAWQQLKTEASSALREWKKTNPDKALDDKPFWMTGEAWGHG
                     VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
                     RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
                     ANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFVREHGDDKVLVIWAGQQ"
     gene            13525..14778
                     /gene="avtA"
                     /locus_tag="OQQ57_002341"
     CDS             13525..14778
                     /gene="avtA"
                     /locus_tag="OQQ57_002341"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HCS1957084.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNVFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(14929..15402)
                     /locus_tag="OQQ57_002342"
     CDS             complement(14929..15402)
                     /locus_tag="OQQ57_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HCS1957085.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(15504..16352)
                     /gene="yiaJ"
                     /locus_tag="OQQ57_002343"
     CDS             complement(15504..16352)
                     /gene="yiaJ"
                     /locus_tag="OQQ57_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HCS1957086.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWENHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
                     GVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DLGAIT"
     gene            16553..17551
                     /gene="yiaK"
                     /locus_tag="OQQ57_002344"
     CDS             16553..17551
                     /gene="yiaK"
                     /locus_tag="OQQ57_002344"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HCS1957087.1"
                     /translation="MKVTFEQLKAAFNRALISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
     gene            17563..18031
                     /locus_tag="OQQ57_002345"
                     /pseudo
     CDS             17563..18031
                     /locus_tag="OQQ57_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
     gene            18149..18622
                     /gene="yiaM"
                     /locus_tag="OQQ57_002346"
     CDS             18149..18622
                     /gene="yiaM"
                     /locus_tag="OQQ57_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HCS1957088.1"
                     /translation="MKKILEVILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
                     TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
     gene            18625..>19607
                     /locus_tag="OQQ57_002347"
     CDS             18625..>19607
                     /locus_tag="OQQ57_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HCS1957089.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPDMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
                     VVMFLVASAQVSTWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVG"
BASE COUNT         4951 a         4912 c         4765 g         4979 t
ORIGIN      
        1 tttcatgatt tccggctatc tcttttttgg cgaacgcagc gcccagccgc gccatttctt
       61 gcgtatcggc ttatgtctga ttttttatag cgcaatcgca ctgctctaca ttgcgctgtt
      121 tacctccatc aatatggagt tagcgctgaa aaacctgctg caaaagccag tgttttacca
      181 cttgtggttt ttcttcgcga ttgcggtgat ttatctggtt tcaccgctga ttcaggtgaa
      241 gaacgtcggc ggaaaaatgt tgctggtgct aatggcggtg attggcatta tcgctaaccc
      301 aaacacagtg ccgcagaaaa ttgacggttt tgaatggctg ccaattaact tatatatcaa
      361 tggcgatact ttttactaca ttctgtatgg catgttgggc cgcgctatag ggatgatgga
      421 cacacagcat aaagcactgt cgtgggtgag cgccgcgctg tttgcgacgg gggtttttat
      481 tatctctcgc gggacattat atgaattgca gtggcgcgga aattttgccg atacctggta
      541 tctttactgt gggccgatgg tttttatctg cgcaatcgcg ctattgactc tggttaaaaa
      601 cacgctggat acgcgtacca ttcgcggact tggcttaatc tcccgccatt cattgggtat
      661 atacggattc cacgccttga ttatccatgc gctgcgcacc cggggaattg agcttaaaaa
      721 ttggccaata ctggatatta tttggatctt ttgcgcgacg ttggcagcga gtttgttact
      781 ttctatgctg gtacaacgaa tcgacagaaa cagattagtg agttaagtaa aagcccgttc
      841 acattggact gaccgggctt acgtgaatta ttcgctgtat tcttcctggg taacctgtgt
      901 ttcttttggc gggtttattc cggcatcacg aatattcttc tgcaccgcta ctgcaccaaa
      961 caagcttaag aagaaagcca gtccataaaa acctttttca ctgagtaata atgtcgcatt
     1021 ccacagacct accatcagta atgcaacaga gataataaag acagtcaggc aggtcatata
     1081 ataaatggaa gtggtcggta tgccttcata cttgtcccga acggtctttt gataagacgc
     1141 agcagaaaac agtcctaaca ccagtacggc aaaataatac cctttttcat ttaactgcat
     1201 ctctgcattc catagcccta acagataggt aacgatacca ccaacgagag ctatccatga
     1261 cacaatacta aaggccggtg aataggttga tattttgttg tccatcacag tattcctttc
     1321 attcctgaat gtgtaagagc tttatgttgc tcataccgag cgaaacaaac gcatttgacc
     1381 aaacaagcag acaaaaaagg cgatggggta gatcaccatt tcataagcat tgataggtgc
     1441 atttaaaaca ccgataaaca agagaccgat agtgattaac gcaactaact ggcagatatg
     1501 ggtaaaaaaa ttatccagtt gcccgagttt ttctgcgcga agatatgcat agttaccaaa
     1561 agttgctgtc attaacacgc caagaaaata gccttttcca cttagcaatg ggcatgagat
     1621 ccatagccca accagataaa ccagcgcccc gacaacaaat aatagttttg ccacagtttt
     1681 tgaggttttc ataacgatct ccatatctac cagcgataca ttacgagtaa ccaacgaaag
     1741 acaaaactga aaaatgccat taacaaatga ttttcagaat aaattcatac taaatattaa
     1801 ttagtgagat atatagatgt gaattatccc ccacccggtc aggcagggga taacgtttac
     1861 gccattaatg gcagaagttg ctgatagagg cgacggaacg tttcacgtcg tggctgataa
     1921 gcggcataac gctgcgcatc tggtagatgc gactgttcta acggtagctg cggcaacaac
     1981 tcaatgagcg atttctctgg attcgccgca atctgcgcca gccttgctgc gcccagtgct
     2041 ggccccacat ccccccgtac ggtaatcgag ctgctgaccg ctgatatccg ccagcatctg
     2101 acgccagtac tcactacgcg ccccgccacc aatcaacgta acactttgcg gtttaatgcc
     2161 gcaggcatgc acgacatcca tgccatctgc cagcgcataa cccacgcctt ccagcactgc
     2221 tcgcgccagt tcattggggc catgttgatg agtcaaacca aagaaaaccc ccttcgcctg
     2281 gggattattg tgtggtgtac gctcgccgga aagataaggc agaaaccaaa ctggctcggc
     2341 actttcatca gcctgttgag ctgcagcgat taaagctggg acattgcaca ggccggttaa
     2401 tttcgcgacc caatccagac acgatgctgc actcagcatt acagacatta aatgccaacg
     2461 ctgcggtagc gcatggcaaa agctgtgtac agcgctttct ggcttgctta agaacccttc
     2521 gctgacagca aaatagaccc ccgacgtccc cagcgataac attgcctgat tagcatcaac
     2581 cattcccaca ccaactgcat tgtcgccacc gcctgcgaca actggcaccg tcgccatacc
     2641 ccacgctttc gcaacttcag gtaacaaagc accagtaatt tcgctgcctt cgtataatgc
     2701 gggcatctgg tcacgagata agtcgcaagc ctgcagcatg acgtcactcc agtcacgctt
     2761 tgcgacatcc agccacatgg tgccagctgc gtcagacata tcgctggcaa actcccccgt
     2821 catacgcaga cgcaagtaat ctttcggtaa taatactttg tcgatttgac ggaatatctc
     2881 cggctcatgc cgctgaaccc atagcaattt aggcgcagta aatccgggca tcatcaggtt
     2941 gccggtaatc actcgtgatt gcggaactct cgcttccagc aaagtgcact cttgcgcaca
     3001 gcgcccgtcg ttccacaaaa tggcagggcg caatacccgt tgttgagcat ccagtaaggt
     3061 tgctccatgc atctggccgg caatacccaa tgctttaacg tcctgcagag aatgctgatc
     3121 gcccagagct ttcattgcgc gatcagttgc ctgccaccac tgttccgggt cttgttccga
     3181 ccagagtgga tgcgggcgcg aaacggtcag cttttccgtt tgcgaagcaa ccacctcacc
     3241 ctgctcgttg agcaaaataa cttttacgcc cgaggtgcca agatctatcc cgatatacat
     3301 atcgatcgtt ccttaaaaaa atgcccggta tcgctaccga taaccgggcc aacggactgc
     3361 acagttagcc gttatttgtc gaacagataa tgatttacca gattttccag ttgctcctag
     3421 cgaccactct gatgcaccgg agacaaatta tgttcctgag catatttggc taaatctgcc
     3481 agtgacattt ggcctttcag gatttgctgg cccaattcgc tattccagcc ggaataacgc
     3541 tgcgcgatgc gtttatccag ctcgccatct tcaatcatgc gcgctgcaat tttcagcgcc
     3601 agtgccatcg tatccatcgc gccgatatga ccgtaaaaca gatcatattt atcagtactt
     3661 tgacgacgta ctttggcatc gaagttcaga ccaccggtgg tgaaaccgcc tgctttgaga
     3721 atttcataca tcaccagcgc attctcttcc acactgttcg ggaactggtc ggtgtcccag
     3781 cccagttgcg catcgccacg gttggcgtcg acagaaccga acaggccaag cgcaatggcg
     3841 gtggctattt catgatggaa agagtgacct gccagcgtcg cgtggttagc ttcaatgttc
     3901 agtttaatct ctttttccag accaaactgt ttcaggaagc catagaccgt cgcggcatcg
     3961 taatcatatt gatgtttagt cggttcttgc ggtttcggtt cgataagcaa cgtgccctgg
     4021 aagccgattt tatgtttatg ctcaaccacc atctgcataa agcggcccag ttgttcacgc
     4081 tcctgacgca agtcggtatt taacagcgtt tcgtaacctt cacgaccacc ccacaggaca
     4141 tagttttcac cgcccaattt atgggttgct tccatcgctg taacaacttg cgttgccgcc
     4201 cagctgaaga cttcaggatc tgggttcgtc gccgcacccg cgccatagcg agggtttgta
     4261 aagcagttag cggttcccca cagcagcttc acgccgctct cttcttgctt ggctgccagg
     4321 acatcaacca tttgcgcaaa attattgatg tactctttta acgacgcgcc ctcaggggaa
     4381 acatccacat cgtggaagca ataaaatgac acatgtaact tgtggaaaaa ctcaaatgcg
     4441 acatctgctt tacgcttcgc caacgccagt gcctcaccag gctgctgcca cggacgatta
     4501 aacgccccca caccaaacat gtccgccccg ttccagcaga aggtgtgcca gtaacaggcg
     4561 gcaaaacgca agtgctcttc catacgctta cccaacacca gttcgtcggg attgtagtga
     4621 cggaatgcta acgggtttga ggattttgag ccttcataac gaacgcgatc gagctggtca
     4681 aaataggctt gcatattgaa ctccataatc aggtaatgcc gcgggtgatg gatgatgtcg
     4741 taatattggg cactcccttt cagttgctca attatgttat ttcacactgc tattgagata
     4801 attcacaagt gtgcgctcgc tcgcaaaata aaatgggatg atgaaactgg gtaattcctc
     4861 gaagataaaa atgcaataag tacaattgcg caacaaaagt aagatctcgg tcataaatca
     4921 agaaataaac caaaaatcgt aatcgaaaga taaaaatctg taattgtttt cccctgttta
     4981 gttgctaaaa attggttacg tttatcgcgg tgattgttac ttattaaagc tgtcctctaa
     5041 ctacagaagg ccctacacca tgaaaataaa gaacattcta ctcacccttt gcacctcact
     5101 tctgcttacc aacgttgcgg cacacgccaa agaagtcaaa ataggtatgg cgattgatga
     5161 tctacgtctt gaacgctggc aaaaagatcg agatattttt gtgaaaaagg ctgaatctct
     5221 cggtgcgaaa gtatttgtac agtctgcaaa tggcaatgga gaaacacaaa tgtcgcagat
     5281 tgaaaacatg attaaccggg gtgtcgatgt tcttgtcatt attccgtata acggccaggt
     5341 attaagtaac gttgtaaaag aagccaaaca agaaggtatt aaagtattag cttacgaccg
     5401 tatgattaac gatgcggata tcgattttta tatttctttc gataacgaaa aagtcggtga
     5461 actgcaggca aaagccctgg tcgatattgt tccgcaaggt aattacttcc tgatgggcgg
     5521 ctcgccggta gataacaacg ccaagctgtt ccgcgccgga caaatgaaag tgttaaaacc
     5581 ttacgttgat tccggaaaaa ttaaagtcgt tggtgaccaa tgggttgatg gctggttacc
     5641 ggaaaacgcg ctaaccgcca ataataacaa aattgatgct gtagttgcct caaacgatgc
     5701 caccgcaggt ggggcaattc aggcattaag cgcgcaaggt ttatcaggga aagtagcaat
     5761 ttccggccag gatgcggatc tcgcaggtat taaacgtatt gctgccggta cgcaaactat
     5821 gacggtgtat aaacctatta cattgctggc aaatactgcc gcagaaattg ccgttgaatt
     5881 gggcaatggt caggagccaa aagcagatac ctcactgaat aatggcctga aagatgtccc
     5941 ctcccgcctc ctgacaccga tcgatgtgaa taaaaacaac atcaaagata cggtaattaa
     6001 agacggattc cacaaagaga gcgagctgta agcgttacgc cccggcgcgg agcgggggcg
     6061 tgatttctct ccatgccgcg tgaatgaatt ggcttaggtg gagtcgttat gccttatcta
     6121 cttgaaatga agaacattac caaaaccttc ggcagtgtga aggcgattga taacgtcagc
     6181 ttgcggttga atgctggcga aatcgtctca ctctgtgggg aaaatgggtc tggtaaatca
     6241 acgctgatga aagtgctgtg tggtatttat ccccatggct cctacgaagg cgaaattatt
     6301 tttgcgggag aagagattca ggcgagtcac atccgcgata ccgaacgcaa aggtatcgcc
     6361 atcattcacc aggaattggc cctggtgaaa gaattgaccg tgctggaaaa tatcttcctg
     6421 ggtaacgaaa taacccacaa tggcattatg gattatgacc tgatgacgct acgctgtcag
     6481 aagctgctcg cacaggtcag tttatccatt tcacctgata cccgcgttgg cgatttaggg
     6541 cttgggcaac aacaactggt tgaaattgcc aaggcactta ataaacaggt gcgcttgtta
     6601 attctcgatg aaccgacagc ctcattaact gagcaggaaa cgtcggtttt actggatatt
     6661 attcgcgatc tacaacagca cggtatcgcc tgtatttata tttcgcacaa actcaacgaa
     6721 gtcaaagcga tttccgatac gatttgcgtt attcgcgacg gtcagcacat tggtacgcgt
     6781 gatgctgccg gaatgagtga agacgatatt atcaccatga tggtcgggcg agagttaacc
     6841 gcgctttacc ctaatgaacc acataccacc ggagatgaaa tattacgtat tgaacatctg
     6901 acggcatggc atccggttaa tcgtcatatt aaacgagtta atgatgtctc gttttccctg
     6961 aaacgtggcg aaatactggg tattgccgga ctcgttggtg ccggacgtac cgagaccatt
     7021 cagtgcctgt ttggcgtgtg gcccggacaa tgggaaggaa aaatttatat tgatggcaaa
     7081 caggtagata ttcgtaactg tcagcaagcc atcgcccagg ggattgcgat ggtacccgaa
     7141 gacagaaagc gcgacggcat cgttccggta atggcggttg gtaaaaatat taccctcgcc
     7201 gcactcaata aatttaccgg tggcattagc cagcttgatg acgcggcaga gcaaaaatgt
     7261 attctggaat caatccagca actcaaagtt aaaacgtcgt cccccgatct tgctattgga
     7321 cgtttgagcg gcggcaatca gcaaaaagcg atcctcgccc gctgtctgtt actcaacccg
     7381 cgcattctca ttcttgatga acctaccagg ggtattgata ttggcgcgaa atatgagatc
     7441 tacaaattaa ttaaccaact cgtccagcag ggtattgccg ttattgtcat ctcttccgaa
     7501 ttacctgaag tgctcggcct tagcgatcgt gtactggtga tgcatgaagg gaaactaaaa
     7561 gccaacctga taaatcataa cctgactcag gagcaggtga tggaagccgc attgaggagc
     7621 gaacatcatg tcgaaaagca atccgtctga agtgaaattg gccgtaccga catccggtgg
     7681 cttttccggg ctgaaatcac tgaatttgca ggtcttcgtg atgattgcag ctatcatcgc
     7741 aatcatgctg ttctttacct ggaccaccga tggtgcctac ttaagcgccc gtaacgtctc
     7801 caacctgtta cgccagaccg cgattaccgg catcctcgcg gtaggaatgg tgttcgtcat
     7861 aatttctgct gaaatcgacc tttccgtcgg ctcaatgatg gggctattag gtggcgtcgc
     7921 ggcgatttgt gacgtctggt taggctggcc tttgccactt accatcattg tgacgttggt
     7981 tctgggactg cttctcggtg cgtggaacgg atggtgggtc gcgtaccgta aagtcccttc
     8041 atttattgtc accctcgcgg gcatgttggc atttcgcggc atactcattg gcatcaccaa
     8101 cggcacgact gtatccccca ccagcgccgc gatgtcacaa attgggcaaa gctatctccc
     8161 cgccagtacc ggcttcatca ttggcgcgct tggcttaatg gcttttgttg gttggcaatg
     8221 gcgcggaaga atgcgccgtc aggctttggg tttacagtct ccggcctcta ccgcagtagt
     8281 cggtcgccag gctttaaccg ctatcatcgt attaggcgca atctggctgt tgaatgatta
     8341 ccgtggcgtt cccactcctg ttctgctgct gacgttgctg ttactcggcg gaatgtttat
     8401 ggcaacgcgg acggcatttg gacgacgcat ttatgccatc ggcggcaatc tggaagcagc
     8461 acgtctctcc gggattaacg ttgaacgcac caaacttgcc gtgttcgcga ttaacggatt
     8521 aatggtagcc atcgccggat taatccttag ttctcgactt ggcgctggtt caccttctgc
     8581 gggaaatatc gccgaactgg acgctattgc agcatgcgtg attggcggca ccagcctggc
     8641 tggcggtgtg ggaagcgttg ccggagcagt aatgggggca tttatcatgg cttcactgga
     8701 taacggcatg agtatgatgg atgtaccgac cttctggcag tatatcgtta aaggtgcgat
     8761 tctgttgctg gcagtatgga tggactccgc aaccaaacgc cgttcttgat tttgataaaa
     8821 attttctcaa agccggttac gtattaccgg ttttgagttt ttgcatgatt cagcaggaaa
     8881 agaaccatgt ttactaaacg tcaccgcatc acattactgt tcaatgccaa taaagcctat
     8941 gaccggcagg tagtagaagg cgtaggggaa tatttacagg cgtcacaatc agaatgggat
     9001 attttcattg aagaagattt ccgcgcccgc attgataaaa tcaaggactg gttaggagat
     9061 ggcgtcattg ccgacttcga cgacaaacaa atcgagcaag cgctggctga tgtcgacgtc
     9121 cccattgttg gggttggcgg ctcgtatcac cttgcagaaa gttacccacc cgttcattac
     9181 attgccaccg ataactatgc gctggttgaa agcgcatttt tgcatttaaa agagaaaggc
     9241 gttaaccgct ttgcttttta tggtcttccg gaatcaagcg gcaaacgttg ggccactgaa
     9301 cgcgaatatg catttcgtca gcttgtcgcc gaagaaaagt atcgcggagt ggtttatcag
     9361 gggttagaaa ccgcgccaga gaactggcaa cacgcgcaaa atcggctggc agactggcta
     9421 caaacgctgc caccgcaaac cgggattatt gccgttactg acgcccgggc gcggcatatt
     9481 ctgcaagtat gtgaacatct acacattccc gtaccggaaa aattatgcgt gattggcatc
     9541 gacaacgaag aactgacccg ctatctgtcg cgtgtcgccc tttcttcggt cgctcagggc
     9601 gcgcggcaaa tgggctatca ggcggcaaaa ctgttgcatc gattattaga taaagaagaa
     9661 atgccgctac agcgaatttt ggtcccacca gttcgcgtca ttgaacggcg ctcaacagat
     9721 tatcgctcgc tgaccgatcc cgccgttatt caggccatgc attacattcg taatcacgcc
     9781 tgtaaaggga ttaaagtgga tcaggtactg gatgcggtcg ggatctcgcg ctccaatctt
     9841 gagaagcgtt ttaaagaaga ggtgggtgaa accatccatg ccatgattca tgccgagaag
     9901 ctggagaaag cgcgcagtct gctgatttca accaccttgt cgatcaatga gatatcgcaa
     9961 atgtgcggtt atccatcgct gcaatatttc tactctgttt ttaaaaaagc atatgacaca
    10021 acgccaaaag agtatcgcga tgtaaatcgc gaggtcatgt tgtagcgatg atgagaattg
    10081 tcggcgtcac atcagggaac tcagcacagc cacctgatgc gagcaaaagc cttatccgac
    10141 cgacaaatca gataaggctc aaggaaatgc aattacatat gcgccgcgat taaccgttgg
    10201 ttatcctggt acattgcgaa caggtagtta ttataactct tccctttggt cgagtagccc
    10261 ttcagcttgt gaatcatcgc tgtggcagtc acttcctgat ccgctttacg cagctgcgca
    10321 cgcgatttac ggaacgaaga gtaagccggg tgcgtattca ggttagtgac ataggcgctc
    10381 accgattctt tgacagaact aaactgtgag taccctttca ctttacccgg cgcattggta
    10441 caacgtcctt tcatgcattt catgccgaac agattgttat tgttgcgcgc cagcttcgac
    10501 gttccccaac cgctttctgc tgcagccatc gtcgccacca tactggtagg gataatgtct
    10561 acgcgttcaa gcaaggtatt ccacgggatt tttcgcgtat taccagacca cttcaccttg
    10621 tagcgtttgg cgatgtcttt cagacgcgca cgctcagcag gtgaccattg gccctgatac
    10681 tgttttgaaa tcagccagtt acgttctgca gtaatggctg cattttggct ggtaatgtaa
    10741 ggcattacgg tccggagaaa cgcctttttc cttggtgttc cggaagggta ttttcgcaaa
    10801 tcaggaagtg aacgactctt tgcactattg cgagaatact cttgtttact gcttacctgt
    10861 ttattactag ctttagttaa gtgggacttt tgactcgctg ttgttgtgtg cgtcttcgct
    10921 aacacctcac tcgaaaacac cagagtgagt aacataagaa tcatcgcccc atatcgtcgt
    10981 atgggagtca aaatcatcag gtctcctggt cggatttaat cattccaaca ccttatattt
    11041 ttcacaaatt tgagagttga atctcaaatc atatcaaaaa tagctgtcaa gagcacccca
    11101 aggaatagtc caaatctgaa actatgtcac gagttaacga ttcagattgg cgctaaatcg
    11161 cagaaaatgt ggggtttatc gcaaaattca gccgtttttt gcgcgcgatc gctcaccctt
    11221 gcttctcatc ctgtggactt accgctcagg gatgagtttt gtctggctta tcgctggcaa
    11281 actgtctgaa atcgcagcaa taaggactca tccaccatga aactcgcctc ctgttttctg
    11341 acactccttc ctggcttcgc cgttgccgcc agctggactt ctccggggtt ccctgccttt
    11401 agcgaacagg gaacgggaac atttgtcagc cacgcgcagt tgcccaaagg tacgcgtcca
    11461 ctcacgctaa attttgacca acagtgctgg cagcctgcag atgcgataaa actcaatcag
    11521 atgctttccc tgcaaccttg tagcaacacg ccgcctcaat ggcgattgtt cagggacggc
    11581 aaatatacgc tgcaaataga cacccgctcc ggtacgccaa cattgatgat ttccatccag
    11641 aacgccgccg aaccggtagc aaacctggtc cgtgaatgcc cgaaatggga tggattaccg
    11701 ctcacgctgg atgtcagcgc cactttcccg gaaggagccg ccgtacggga ttattacagc
    11761 cagcaaattg cgatagtgaa gaacggtcaa ataacgttac aacccgctgc taccagcaac
    11821 ggtttactcc tgctggaacg ggcagaaact gacacatccg cccctttcga ctggcataac
    11881 gccacggttt actttgtgct gacagatcgt ttcgaaaacg gcgatcccag taatgaccag
    11941 agttacggac gtcataaaga cggtatggcg gaaattggca cttttcacgg cggcgattta
    12001 cgcggcctga tcaacaaact ggattacctc cagcagttgg gcgttaatgc tttatggata
    12061 agcgccccat ttgagcaaat tcacggctgg gtcggcggcg gtacaaaagg cgatttcccg
    12121 cattatgcct accacggtta ttacacacag gactggacga atcttgatgc caatatgggc
    12181 aacgaagccg atctacggac gctggttgat agcgcacatc agcgcggtat tcgtattctc
    12241 tttgatgtcg tgatgaacca caccggctat gccacgctgg cggatatgca ggagtatcag
    12301 tttggcgcgt tatatctttc tggtgacgaa gtgaaaaaaa cgctgggtga acgctggagc
    12361 gactggaaac ctgccgccgg gcaaacctgg catagcttta acgattacat taatttcagc
    12421 gacaaaacag gctgggataa atggtgggga aaaaactgga tcagaacgga tatcggcgat
    12481 tacgacaatc ctggattcga cgatctcact atgtcgctgg cctttttgcc ggatatcaaa
    12541 accgaatcaa ctaccgcttc tggtctgccg gtgttctata aaaacaaaac ggatactcac
    12601 gctaaagtca tcgaaggctt tacacctcgc gattacttaa cccactggtt aagtcagtgg
    12661 gtccgcgact atgggattga tggttttcgg gtcgataccg ccaaacatgt tgagttgccc
    12721 gcctggcagc aactgaaaac cgaagccagc tccgcgcttc gcgaatggaa aaaaactaac
    12781 cccgacaaag cattagatga caaacctttc tggatgaccg gtgaagcctg gggccacggc
    12841 gtgatgcaaa gtgactacta tcgccacggc ttcgatgcga tgatcaattt cgattatcag
    12901 gagcaggcgg cgaaagcagt cgattgtctg gcgcagatgg atacgacctg gcagcaaatg
    12961 gcggagaaat tgcagggttt caacgtgttg agctacctct cgtcgcatga tacccgtctg
    13021 ttccgtgaag ggggcgacaa agcagcagag ttattactat tagcgccagg cgcggtacaa
    13081 atcttttatg gcgatgaatc ctcgcgtccg ttcggtccta caggttctga tccgctgcaa
    13141 ggtacacgtt cggatatgaa ctggcaggat gttagcggta aatctgccgc caacgtcgcg
    13201 cactggcaga aaatcagcca gttccgcgcc cgccatcccg caattggcgc gggcaaacaa
    13261 acgacacttt cgctgaagca gggctacggc tttgttcgtg agcatggcga cgataaagtg
    13321 ctggtcatct gggctgggca acagtgactt ttccggcttc ccgttcatca gtacctcggg
    13381 aagccgccaa ccaggataaa atgtcagccc taatcagcgt tgcaggataa agcaccgctc
    13441 actcttcaac agaccgattt gcaccccagc aaatgtagcg ttattgttac cttccttgct
    13501 acagagttcg acagatatcc cgctatgaca ttctcccttt ttggtgacaa atttacccgc
    13561 cactccggca ttacgctgct gatggaagat ctgaacgacg gtttacgcac gcctggcgcg
    13621 attatgctcg gcggcggtaa tccggcgcag atcccggaaa tgcaggacta cttccagacg
    13681 ctactgaccg acatgctgga aagtggcaaa gcgactgatg cactgtgtaa ctacgacggt
    13741 ccacagggga aaacggagct actcacactg cttgccggaa tgctgcgcga gaagttgggt
    13801 tgggatatcg aaccacagaa tattgcacta acaaacggca gccagagcgc gtttttctac
    13861 ttatttaacc tgtttgccgg acgccgtgcc gatggtcggg tcaaaaaagt gctgttcccg
    13921 ctggcaccgg aatacattgg ctacgctgac gccggactgg aagaagatct gtttgtctct
    13981 gcgcgtccga atattgaact gctgccggaa ggccagttta aataccacgt cgattttgag
    14041 catctgcata ttggcgaaga aaccgggatg atttgcgtct cccggccgac gaatccaaca
    14101 ggcaatgtga ttactgacga agagttgctg aagcttgacg cgctggcgaa tcaacacggc
    14161 attccgctgg tgattgataa cgcttatggc gtcccgttcc cgggtatcat cttcagtgaa
    14221 gcgcgcccgc tatggaatcc gaatatcgtg ctgtgcatga gtctttccaa gctggggctg
    14281 cctggctccc gctgcggcat tatcatcgcc aatgaaaaaa tcatcactgc catcaccaat
    14341 atgaacggca ttatcagcct ggcacctggc ggtattggtc cggcgatgat gtgtgaaatg
    14401 attaagcgta acgatctgct gcgcctgtct gaaacagtca tcaaaccgtt ttactaccag
    14461 cgtgttcagg aaactatcgc catcattcgc cgctatttac cggaaaatcg ctgcctgatt
    14521 cataaaccgg aaggagccat tttcctctgg ctatggttta aggatttgcc cattacgacc
    14581 gagcagctct atcagcgcct gaaagcacgc ggcgtgctga tggtgccggg gcacaacgtc
    14641 ttcccgggac tggataaacc gtggccgcat acgcatcaat gtatgcgcat gaactacgta
    14701 ccagagccgg agaaaattga ggcgggggtg aagattctgg cggaagagat agaaagagcc
    14761 tgggctgaaa gtcactaaaa attgcctgat gcgctacgct tatcaggcct acatgatttc
    14821 tgcaatatat tgaatttgga agaatttgta ggccggataa ggcgtttacg ccgcatctgg
    14881 cataaacaaa gcgcactatt ccggcgttga gaaacgccgg aaaacgtttc aaacaggctg
    14941 ctgccgtagc cgatgccgct gcactttctc gacatccatg cactgcaacg cctttgtcgg
    15001 gcaggcttca acacaggccg gccccgtctc ccgatgccag cacagatcgc acttaatcgc
    15061 cctcgccttt ttgcgcgaag aaacgacctc catcgcacca aacgggcaag ccagcataca
    15121 gcttttacag ccaatgcaac gtgtttgttc aacgaaaata tgcccatgtt cgcggcttat
    15181 cgcgtcaaca gggcagacat tcgcgcacgg tgcatcttca cactgatgac aggctactgc
    15241 cgtggtccag ctgtggtctt taatgacacg aatacgggaa ataaactcgt ctggtgacaa
    15301 cgcagcgcaa tcctgattct cctgatgcga cactgcgcaa gccacttcac aggtacggca
    15361 accgatacat ttcgtcgcat ccgcaataat aaaccggttc atgatcactc ctttgcacta
    15421 aaacagcaga gtgccagaga gcgcgtccct actgctttga tccaacgaag gaaatgttaa
    15481 agttttggca cttgtccaaa gcgttatgtg atcgcgccca ggtcatccct gacagtaaat
    15541 cccagttcat tagaaatagc ctgcgcggtt tcacgcagtg gtttcaggag atttttctct
    15601 cccacctgtt tcagacgtga tgtcgaaagc gaaatcgaca cggcgtacgg cacccgccca
    15661 tgaatatcaa acaccggaac agcaatacag gagacgccga gttcgttttc ttctctgtcc
    15721 atcgccgctc cgctttcacg aatgtgcgcc agttcgtcga acatcgcggg cagctcggta
    15781 atggtattgc gggttaacgg ctggatctca tgctgatggt tttcccagta tgacttcacg
    15841 tagtccgggt gaccaaacgc catgtagatc ttgcccattg cggaacagta gagcggcata
    15901 tgctggccaa tataggcacg ggttcgcagc atcccggttg tgggttccag cttataaatc
    15961 aaaatagcgt gatcgtcttc gcggctggag aagttaatgg tttcaccagt ggcgatgttc
    16021 agtgcctcaa gatgcggagc ggcgatatga atgatattca gcgaagacag cgccttctgc
    16081 ccgacggcaa taaatttggt agtcaggcgg taactccctg cggcgggcgc ggtggtcaca
    16141 tagccgcagg actgtaatcc ctgcaataag cgatggacgg tactcttatt taaaccagcc
    16201 agctccgaaa gatgcgccaa cggacaaccg tttggatagt tgctcaaaat ctcaatcagc
    16261 atcaacccgc gaaacagact ctggcttccg gctggacgct ctttttcctg cgccatctcg
    16321 ttctcttttt ttcccatcac ttctttcccc attttgtcgc gtcctgatgg tagcgcaaag
    16381 tgtgccgtag ttcacgatct cgacagataa tttataacca cttgattttt atgtcttttg
    16441 aaattcatca atcagattgc tttgttaaaa agtgatcgat atatttgaaa tcaagtttcg
    16501 catattgaaa ttttaagcca aaaaagcgat caaaaaaaca aggaagcctg ggatgaaagt
    16561 gacatttgag cagttaaaag cagcctttaa tcgggcctta atttcacgcg gcgttgacag
    16621 cgaaacggct gacgcctgtg cagagatgtt cgcccgcacc accgaatccg gcgtttattc
    16681 tcacggcgtt aatcgtttcc ctcgtttcat tcaacaactg gaaaacggcg atatcattcc
    16741 tgatgcccaa cccaaacgta taaccagcct cggcgcaatt gaacagtggg atgcccagcg
    16801 ttcgatcggc aacctgacgg cgaaaaagat gatggatcgc gccattgaac tggctgccga
    16861 tcacggtatt ggtctggtgg cacttcgtaa tgccaaccac tggatgcgcg gcggcagcta
    16921 cggctggcag gcggcggaaa aaggctatat tggcatttgc tggaccaact ccatcgccgt
    16981 aatgccgccg tggggcgcaa aagagtgtcg cattggcact aacccgctga tcgtcgccat
    17041 tccttccacg ccgatcacca tggtcgatat gtcgatgtcg atgttctctt acggcatgtt
    17101 agaagttaac cgcctggcgg gccgtcagct cccggtcgat ggtggctttg atgatgaggg
    17161 caatttgacc aaagaacctg gcgttatcga gaagaatcgc cgcattttgc cgatgggcta
    17221 ctggaaaggt tctggcatgt cgattgtgct ggatatgatc gctactctcc tttccgacgg
    17281 cgcatcggtt gccgaagtca cccaggacaa cagcgacgaa tacggcattt cacaaatttt
    17341 tattgccatt gaagtggaca agcttatcga cggtcccacc cgcgatgcca agctgcaacg
    17401 catcatggat tacgttacta ccgctgaacg cgctgacgaa aaccaggcca tccgcttacc
    17461 cggccacgaa tttactaccc tgctggccga aaaccgccgt aacggcatca ctgttgatga
    17521 cagcgtgtgg gccaaaatcc aggcgttatg aggagataag tcatgatttt tggacatatc
    17581 gcgcagccca atccgtgccg tttgcccgcc gccattgaaa aggcgctcga ttttctgcgc
    17641 gctaccaact tcaacgtcct ggagccgggc gttgtcgaaa tcgacggcaa gaatatttat
    17701 gcgcaaatta tcgatttaac cacacgcgaa gcggtggaaa accgtccgga agtgcatcgt
    17761 cggtatatcg atattcagtt tctggcgtgg ggtcaagaga aaatcggcat tgctattgat
    17821 acaggaaata ataaagtcag cgaatcacta ttagagcagc gcgatattat tttttatcat
    17881 gtcagtgaac atgaatcatt tatagaaatg ataccgggca gctacgctat tttcttcccg
    17941 caggatgttc accgaccagg ttgtattctg caaacaggcc tctgagatac gaaaaattgt
    18001 ggttaaagtc gcattaacag cgctgaatta atcaaataat cgtctacgcc agaacgactg
    18061 ggtaatgtta ttgctctaac tatattaata atttaggttg ctgcacatgc aacttgaatt
    18121 atgacagaca tagcctcaag gaatagctat gaaaaaaata cttgaagtaa tactggcgat
    18181 taatctcgcc gtactttcct gtattgtgtt tataaacatt attttaagat atggttttca
    18241 gacaagcatt ttatctgtag atgaattgtc acgttattta tttgtctggt taacatttat
    18301 tggcgcgatt gtggctttta tggataacgc ccacgttcag gtcacctttc tggtggagaa
    18361 actctccccc gcatggcaac gacgagtcgc tctggttacc cattccttaa tcttatttat
    18421 ttgtggcgca ctggcctggg gcgcaacact aaaaacaatt caggactgga gcgattattc
    18481 accgatcctc ggtttgccca tcggcctgat gtatgccgct tgtctgccca ccagcctcgt
    18541 tatcgcattc tttgaactgc gtcatttata tcaactcatc acgcgtagca attctctaac
    18601 gtcgccaccg caaggagctt aatcatggct gtgctgattt ttctgggctg tctgttgggt
    18661 ggtattgcta tcggtttgcc tattgcctgg gcactgttgt tgtgcggggc ggcgttaatg
    18721 ttctggctgg acatgtttga tgtccagatc atggcacaaa cgctggtgaa cggagccgat
    18781 agcttctccc tgctggcgat tccgttcttt gtgctggcgg gtgaaatcat gaatgcgggc
    18841 ggcttgtcaa aacgcattgt tgacctgccg atgaaactgg tggggcataa accaggcggg
    18901 ctgggctacg tcggcgtgct ggcagctatg attatggcga gcctttctgg ttctgccgtt
    18961 gcggataccg ccgccgttgc cgctctactg gtgccgatga tgcgcagcgc caactacccg
    19021 gtcaaccggg cggcggggct gattgcctct ggcggcatta tcgcgccaat tattccccct
    19081 tccattccgt ttattatctt cggcgtttcc agcggattat ccatcagtaa gctgtttatg
    19141 gcgggcattg cccctgacat gatgatgggc gcaacgctga tgcttacctg gtggtggcag
    19201 gccagtcgcc ttaatttacc ccgccagcaa aaagcaacga tgcaggaaat ctggcactct
    19261 tttgtctccg gtatctgggc tctgtttctt ccagtcatca ttattggcgg gtttcgctcc
    19321 ggtctgttta cccctaccga agccggggcc gttgctgctt tctatgcgct gtttgtcgcc
    19381 acagttattt accgtgaaat gaccttcgcc acactttggc atgtactcat tggcgcggcg
    19441 aaaaccacct cagtggttat gtttctggtg gcctcggcac aagtttccac ctggctgatt
    19501 accattgctg aactgccgat gatggtttct gatttactgc aaccgttggt cgattcaccg
    19561 cgtctgctgt ttatcgtcat tatggtggct atcctgattg tcggcat
//
LOCUS       DAJVUK010000073        19595 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.073, whole genome shotgun sequence.
ACCESSION   DAJVUK010000073 DAJVUK010000000
VERSION     DAJVUK010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19595
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.073"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(189..530)
                     /locus_tag="OQQ57_002348"
     CDS             complement(189..530)
                     /locus_tag="OQQ57_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HCS1957090.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVEGLKL
                     IESGDWLDRDK"
     gene            complement(533..4312)
                     /gene="tamB"
                     /locus_tag="OQQ57_002349"
     CDS             complement(533..4312)
                     /gene="tamB"
                     /locus_tag="OQQ57_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HCS1957091.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPDEKPLGETLKDLFSR
                     PVLPEMTDLHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDS
                     NQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGP
                     VDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMR
                     TAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTL
                     NGINTAKEFPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGN
                     SYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKV
                     RGTVEAPQLLADITARGLRWQELSVTQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNI
                     NLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTLVGPW
                     SLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDFAMLK
                     PFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTL
                     NLTAELRNNRAELGWTIRLTNNGQFDGQVLVTDPQGRRNLGGNVNIRNFNLAMINPIF
                     TRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMR
                     STLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFE
                     ATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNL
                     IVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGE
                     LLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSY
                     LLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQV
                     VVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            complement(4309..6042)
                     /gene="tamA"
                     /locus_tag="OQQ57_002350"
     CDS             complement(4309..6042)
                     /gene="tamA"
                     /locus_tag="OQQ57_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HCS1957092.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSCGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            6248..6886
                     /gene="msrA"
                     /locus_tag="OQQ57_002351"
     CDS             6248..6886
                     /gene="msrA"
                     /locus_tag="OQQ57_002351"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HCS1957093.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNEPDGME
                     IAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            7209..8552
                     /locus_tag="OQQ57_002352"
     CDS             7209..8552
                     /locus_tag="OQQ57_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCS1957094.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(8614..8820)
                     /locus_tag="OQQ57_002353"
     CDS             complement(8614..8820)
                     /locus_tag="OQQ57_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HCS1957095.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            9145..9699
                     /locus_tag="OQQ57_002354"
     CDS             9145..9699
                     /locus_tag="OQQ57_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HCS1957096.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLQKLLK"
     gene            complement(9789..10700)
                     /locus_tag="OQQ57_002355"
     CDS             complement(9789..10700)
                     /locus_tag="OQQ57_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957097.1"
                     /translation="MLPRIRHNNFIGAVELFVKSSHTKTHSNNFFNNIQHAFKKKDWV
                     SNYDSLLTLWEFFRCATQIDKDSYQVLSSKNETVKAMDKFLISFSLKDNGAEYTMTLR
                     GSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQ
                     AIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLG
                     FALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAVDS
                     DITEEEICEKYKSTIEAFKKEQLALPV"
     gene            complement(10912..11652)
                     /gene="cysQ"
                     /locus_tag="OQQ57_002356"
     CDS             complement(10912..11652)
                     /gene="cysQ"
                     /locus_tag="OQQ57_002356"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HCS1957098.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLTPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVSIY"
     gene            11842..13785
                     /gene="cpdB"
                     /locus_tag="OQQ57_002357"
     CDS             11842..13785
                     /gene="cpdB"
                     /locus_tag="OQQ57_002357"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HCS1957099.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     VVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEEADIT
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKAS
                     GKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYD
                     GECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDRHIAFASPDE
                     NRSVLTAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKG
                     QYPMNKVATDDIGFAIYQVDLSK"
     gene            complement(13914..14294)
                     /locus_tag="OQQ57_002358"
     CDS             complement(13914..14294)
                     /locus_tag="OQQ57_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCS1957100.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREG
                     THRFSDLRRKIGGGSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDEHAA"
     gene            14383..15243
                     /gene="qorB"
                     /locus_tag="OQQ57_002359"
     CDS             14383..15243
                     /gene="qorB"
                     /locus_tag="OQQ57_002359"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HCS1957101.1"
                     /translation="MIAITGATGQLGHYIIESLMKTVPASQIVAIVRNPAKAQALAAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYT
                     SLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVT
                     YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNN"
     gene            15351..16316
                     /locus_tag="OQQ57_002360"
     CDS             15351..16316
                     /locus_tag="OQQ57_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1957102.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLAWGKLAPALVCIGIGLACVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGL
                     LYTFLIRQQMPPLMTLSGIALLVVGVVIVVRAKPEKPLTESVSES"
     gene            16424..17086
                     /gene="ytfE"
                     /locus_tag="OQQ57_002361"
     CDS             16424..17086
                     /gene="ytfE"
                     /locus_tag="OQQ57_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HCS1957103.1"
                     /translation="MAYRDQPLGELALSIPRASALFRKYNMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALA
                     GE"
     gene            complement(17131..18543)
                     /gene="cycA"
                     /locus_tag="OQQ57_002362"
                     /gene_synonym="dagA"
     CDS             complement(17131..18543)
                     /gene="cycA"
                     /locus_tag="OQQ57_002362"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HCS1957104.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFLG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWTGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(18852..19472)
                     /gene="fklB"
                     /locus_tag="OQQ57_002363"
     CDS             complement(18852..19472)
                     /gene="fklB"
                     /locus_tag="OQQ57_002363"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015742582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCS1957105.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
BASE COUNT         4798 a         5189 c         4774 g         4834 t
ORIGIN      
        1 atactcaccg ttcaaagcgt gcccccgttt tacccctgca catttgtgaa cgccagcaga
       61 gttttttatg cgattgcaga tatggaaagc ggctcggaga gaaaagcaaa agatggaaaa
      121 gttacaaaaa aaaatcgcga gatacatcgc ataaaacaac gccacccgaa ggtggcgtgc
      181 ttttattatt acttatccct gtctaaccag tcgccgcttt caattagctt taatccctcg
      241 acgggtcgtt gataaacgta catccatgca ctcccgtacg gcgtctgaat caactggcgc
      301 gcgtattcac cgcccctggt gcgcaaggca tcaagttcgg ccagcgtggc gttgtcaata
      361 cgataaactt caccgtgtac cgttccgttc cccggaactg cgcctggata gtggcccagg
      421 ctatacaact ggtagttatc gatactgaaa tcgcccagta actgggcatt ggtcatccag
      481 tgactgttgc cttgtttgtg gcgtaaactg ccgtagacaa atattcgcat tgctaaaact
      541 cgaactgata gagcaaatcc agtgcctggt ctacaccaga cacggcttcc agatatagct
      601 taggcatcag gcgataacgt aacgtgagtg ttgctataga gtcaaatata cccacgccgt
      661 atttcacttg caggcctggc aatacatagc cgctgaccac tacctgggag gagtcgccta
      721 ctccctgggt gtcgagcgct aaattgctta cgccaaacgt ctcgccgatt ttacccacaa
      781 tctggccact ttgcgcaacc cccagaccaa tcagcatcga ggtcattgcc gcactgtcgc
      841 tctgatcgct ctccagccct tgtccacgta gcaaataaga caatgcagct tgttgcgaca
      901 tcgccgggtc agagaagatc tccgctttcg gttcgtccgc cagaccagtg acgcgaactc
      961 cggcgattac gtcgtcttct gtagcatccg ggttacgaat agcttcaata ttaagatacg
     1021 gttgatctgg cggaccagag aacagtagct cacccttacg cacaatcaga tcctgaccat
     1081 aggcatggaa gcgcccttca gggatgttga tctgcccgtt caggcccagc ccttgtttgt
     1141 cctgaacgac gttaagatcg cccgtcagcc gcgctttcag gccaaaggcg tcaatgcgca
     1201 cattgttgcc aacgtggaca atcaggttac tgttaatcgg aatcgacgcc gttttcggct
     1261 cttccggttg caggttatcg ttaagcatca ccacatcgct ggagacgcct actgcgcttt
     1321 ccggcagatc gtgcaccacg atgcgcgccc acgggacatc cacgcgacca tcgagggtaa
     1381 acaggtttgg tgtagcctcg aatacaacat ctggcgatac atccattcgt accatcggcg
     1441 gcacggtgat ccgcacttta ctgcctttcg ccgttactcg tgcccgccag ttttcaattt
     1501 ggctccagtc ggcatcaccg ttcaggtaga tttcaccctg ctgggtccgt actgtaccgg
     1561 caagcgtcga gcgcataccg ttaaagttga ccgcaagctg gctcggctgc atatcaaacg
     1621 gcataaagtt gccgtcgata tccacacccg taacctgaag ctgaccaaac aactgcgggc
     1681 tttgcacatc accacccaga cgcaagttgg cactcaccat ccccgctgct ttttccccac
     1741 gagtaaagat ggggtttatc atcgcaaggt tgaagttacg gatattgacg ttgccaccaa
     1801 gattacggcg gccttgcgga tcggtcacca gcacctgtcc atcaaactgg ccgttattgg
     1861 tcaggcggat ggtccagccc aattcggcac ggttgttacg caattccgcc gtcagattca
     1921 gtgtctgaaa cgccaccggc agcgccgcat cgttgacggt ttgcgttacc tgcacgttac
     1981 gccccgaaag ggtgatactg ccctgcggca gcccctcttt cgtggtgtcc caggcaacat
     2041 ccgctttacc cgtgaagata ccgctggcct gagtggtttc tggcataaac ggtttcagca
     2101 tggcgaagtc gaagcggttg agattcacca ccgcacgccc ttcggccccc gcatcgatag
     2161 tttgcggcac gcacagttcc gcattcgggt taagccagca gtgtggcccg atgctgattt
     2221 tttgctcctt attgcggtaa tccagcgcaa tatcgcgggt cagcgaccac gggccgacca
     2281 gcgtctggaa gcgggtattg ctaagagttc ccttccagcg ttcttctttg cgatcaaaac
     2341 ttcctgccag attaagctgc ccggagacag gctcgccctg aatccgcaac tgtagctcgt
     2401 gctgcttttc gctgcctttg gcattcaggg tgacgaggtt gatatttaca tccggctgcg
     2461 aaatttgctc aacgcgtacg tcgagtttcc cggcgatctg atcggtggat ttaatgtcgc
     2521 cttccacgcg aacctgcgtc acggaaagtt cctgccagcg caggccgcgc gcggtgatat
     2581 ctgccagtag ttgtggcgct tccaccgtgc cgcgtacttt caccagccct ttcgctgtac
     2641 cgccaagccc cggcagcgcg ttatccagcc ccggcgcgtt gatggtggca tcaagattga
     2701 gatcttttac ccccagctcg cctttcactt cggcactgtt tggccccagt tccagatgaa
     2761 gcccagggat catccactgc atataactgt tgcctttcag cgtgccgtca acgttcactt
     2821 tgttctgttt gacgttaccg gtcagcttca gttctggcac ctccatctgc caggtgccgc
     2881 cgtacaggct accgcgggtt ttaatcaagc cattgagttt cgacggccac tccgggaact
     2941 ctttggcggt gttaatgcca ttaagcgtta gctcaccgcg ccaactaatg gcctgctgcc
     3001 agtcgagcaa cgccttgagt tcagttttcc cttccagcgc cgcgacggtg agtttgtcga
     3061 gattgacctg ctgttcatta cctttggcat caagggtaat ggtggctggc gggatctcct
     3121 gtcccttcac tgccgtacgc atagagagcg tgtaatcggt cattttgccg gtaagtttca
     3181 gtttcagatc atccgcctga tactgcttct caccagtgaa cggccagtaa agctgtttgc
     3241 tgttcacttc cacgttgagc ggcaatccgg cttccgccag tcgcgtctgg gcgcgtaaat
     3301 ccatatccac cggaccggaa agattaacgc caatctccag ctgttcgcgc agcgcgccgc
     3361 ccacttttag cttcactttt tcacctttca acggctccac gttcagtgtg ctgttgaggg
     3421 tgatatccac cggccagttg tctgacagct gcgccgtgcc gctggcgttg acgatcccct
     3481 ggttggaatc gatatccagg gcgtccagtt tagtattgcc gtcaatgctg ctcactttca
     3541 gcagcatggt gcgcacggtg atgtccgtgt cgcccgtcac gcgtaactgc tcgcctttaa
     3601 actcttcaat gttcaggtta agcggcaaat gcaagtcggt catttccggc aataccgggc
     3661 gagaaaagag atctttcagc gtttcgccga gcggcttttc atccggctgc ggattttcaa
     3721 ttttcggttc gaccacttct tcctgcgcca cttccgccac tttcggcaga gcaatcagca
     3781 ggcctttcag cgacgtcggt ttcagggtca gggttttctc ctgccagttc aggccggagg
     3841 tgaagtccat caccgacacc gtggtgtcat caatcttgat gttgacgttg tccagcgcca
     3901 cccgtgtcag ggtgatggga tacggcgtgg agagatccag cggaccgcta tcttcctctt
     3961 cttcaacctg ttcagaagga ggcatttttt tactgtcgat gttgacctga atgtctttca
     4021 gcgccaggtc attaatacaa acgctactgt tccacaggca ctcaagaccg accgccagat
     4081 gcagattacc cgcttttacc gccacgcctg gctgctcata acgaacgtca gacaaggtga
     4141 gatcgcgcca gccgccggtg accttgccaa tatccagtcc tggcacccag cgatccgccg
     4201 ctttaaatac aagatgcagg ccgctggtgg tgcccaccag aaacgccacc gatcccagca
     4261 acagtaagat aacgataacc acgccgaggc tgattttttt ccataaactc ataattctgg
     4321 ccccagaccg atgtaaaact gtaacccgtg ttcgtcttta tccgcgaccg gtacggcaaa
     4381 atcgagtttg attggcccga ccggcgattc ccagcgcacg ccgaccccgg taccggtttt
     4441 aaagtcgctg cggcgaatat cgcttaccgc ttcgccacta tcgacaaaca ccgcgcccca
     4501 ccattttccg gtcacgttgt actggtattc cagcgatccg gttatcaact tcgaggcccc
     4561 tttcaggtca ccgttggcgt atttcggggc gatagatttg tatttgtagc cgcgaatact
     4621 gcgatcgccc ccggcgaaaa aacgcagatc cggcggtact ttgtcgaaat caccggtttc
     4681 aatccagccc agcgtgccgc gtgtaacgaa acgatggcga tcgtacagtg tgcggatcca
     4741 gacgttctgc gcctggaaaa cggagaaatc gacatctgag ccccaggccg tgttggagta
     4801 gtcgatagag tagcgttgcg agtcgcccca ggttggcatc aggccaccac aagaacgcgt
     4861 gcggctaatc atcaccccag gataaaacag catcgtggtg ttggtaattt caccctgagt
     4921 aaagtggtcg agactccagc gcaggttaat ggcacgctgc caaccgctgg agagatccca
     4981 gtagcgagaa gccaccagcg tagtggagtc agattcggta tcgttcaggt cagtgcgctt
     5041 aaaaccgccc tgcaccaaat aatattgttc cagtggattc ttcagcagcg gcattttata
     5101 gctgaagtcg agggtctgtt ccggcgcgga aatactggta ctggtggtca aactgtgacc
     5161 gtatgagttc atccacggct ttttccacgt cgctttcacg cgcggtccca cgtccgtaga
     5221 gtaaccgacc ccggtttcga tggtgttttc tgttcgcggc gaaaccacgc ccgtcaatgg
     5281 taatactttc gtttcgcgcg ctttatcaaa ttgtggagcc accaccaccg agttaaacca
     5341 gccggtagca gaaagtcggc ggttcagttc cgccagatct ttcgattcat actcatcgcc
     5401 ctctttaaac ggcaccagat tttgcaggta ttcatcgcgg atttgtgatc cttcaaaggt
     5461 cacatgccca aagcggtaac gttcgccact gttataatca atatcccaga aggctttatg
     5521 caggccgagc gcaatgccca gctgcgcttt ggtaaattcg ctatcgaaat aacctttacg
     5581 caacgcaata ctggttaagg actttttgaa attttcataa tcgccctggt tcagtaccgt
     5641 accaatagcc gggcgagtat cgagcaattt caaatagtct ttatcggtcc gcgcgccgcc
     5701 gcgcaatacc acatcggtgc cgccaattaa caccggcaca cctggcgtga ctttggcgat
     5761 caatacctgc cgccctttct ttggcggtgg acggagatca aattcaatgg tcggctggta
     5821 ataacccagc gctttcagac cttcacggat ggcatcatcg acgcgtgcgc gaaagcggcg
     5881 gtctggcgtc acttcatcac tttcaatcgt agaaagctgc gcacgaacgt tcttttccag
     5941 ctgtcccgat aacccctcga cctgtagacg gacgttcgcg gcgacggcag atccgcttaa
     6001 gcagagtaag cttacacagc ataactgtcg gatatagcgc acattttctc ctgaatatcc
     6061 ttttttcctg cccctggaac gccgttaaac ggcttaacaa aaatccagta atatggatta
     6121 aaaagcagac taaaccccaa atatttctta tgttttactt tagacctatt cacggtggtt
     6181 attgtgtgca aatacgcctc ttgttacaac cttaacccca atgaccgatt ttcgggagag
     6241 cgacaccatg agtttatttg ataaaaagca tctggtttcc cccgccgatg ccctgcctgg
     6301 acgtaacacc ccgatgcccg tagccacgct gcatgcggtc aacggtcact caatgaccaa
     6361 tgaacctgac ggaatggaga ttgccatttt tgcgatgggt tgtttctggg gtgtggagcg
     6421 tctgttctgg cagttacccg gcgtttacag caccgccgca ggctataccg gcggctatac
     6481 gccaaatccg acttatcggg aagtgtgctc cggtgatacg ggtcatgccg aagcggtacg
     6541 cattgtttac gatccttccg tcatcagcta tgagcagttg ctacaggtat tttgggagaa
     6601 tcacgatccc gcccagggaa tgcgtcaggg caatgaccac ggcacgcagt atcgttcagc
     6661 gatttatccg ctgaccccag aacaggatgc cgcagctcgc gccagtctgg aacgttttca
     6721 ggcggcgatg cttgccgccg atgacgatcg tcacatcacc acggaaatcg ctaacgccac
     6781 accgttttat tatgccgaag atgaccacca gcaatatctg cataaaaacc catatggtta
     6841 ctgtggaatt ggcggaattg gcgtctgtct gccgccggaa gcatagcgtt acgggtacaa
     6901 atgtagtttg ttgataaagt gctctttgtc tatgcctgat gcggcttaaa cgacttacca
     6961 ggcctacaaa atcgtccaaa ttcaatatat tgcaaggact gcgtaggcct gatcggcata
     7021 gcgcatcagg cagtattgca tttatcagca gtctgaattt taaccctctg gcgactttac
     7081 agtaccttac gctatactag ccactgaaaa ttccggttca ctttcttcga atcggctttc
     7141 aatgtgtatt tcacacaaat taatcaactt tcccttccga ggatctggcc tgaaaggtcg
     7201 gataagatat gttaaacagt attttagtca tactctgctt gatcgctgta agtgcgttct
     7261 tctcgatgtc cgagatctcg cttgccgcct cacgcaaaat caaacttaaa ctgctggctg
     7321 atgaaggcaa tataaatgcc caacgcgttc tgaatatgca ggaaaatccc ggcatgttct
     7381 ttaccgtggt ccaaatcggt ctgaacgcag tggcgattct cggcggtatc gtcggtgatg
     7441 cggcattttc tccagctttt cacagcctgt tctcccgcta tatgtcggca gagctctctg
     7501 agcaactgag ctttattctc tctttctcgt tagtgactgg catgtttatc ctgtttgcgg
     7561 atttaacccc gaaacgcatc ggtatgattg cgccagaagc ggtggctttg cgtatcatca
     7621 acccgatgcg cttctgcctg tacgtttgca ccccgctggt gtggttcttc aacggcctgg
     7681 cgaacatgat cttccgtatt ttcaaactgc caatggtacg taaagatgac atcacttctg
     7741 atgacatcta cgcggtagtg gaagccggtg cgctggcggg cgtgttacgt aaacaggaac
     7801 acgagctgat tgaaaacgtc tttgagctgg aatcccgtac cgttccgtct tcaatgacac
     7861 cgcgtgaaaa cgtgatttgg tttgatctcc acgaagatga gcaaagcctg aagaataagg
     7921 tggcggaaca tccgcactct aagttcctcg tctgtaatga agatattgac cacatcatcg
     7981 gttatgtcga ttctaaagac ctgctgaacc gcgtgctggc taaccaaagc ctggcactga
     8041 acagcggcgt acaaattcgc aacacgctga ttgtgccgga tacgttaacc ctttcagagg
     8101 cgttggaaag ttttaaaacc gcaggtgaag acttcgcggt gatcatgaac gagtacgcgc
     8161 tggtggtggg gatcatcacc ctcaacgacg tgatgaccac gctgatgggc gatctggtcg
     8221 gtcaggggct ggaagagcag attgtcgccc gtgatgagaa ctcatggctg attgacggcg
     8281 gcaccccaat tgacgacgtc atgcgcgtgc tggatattga cgagttcccg cagtcgggca
     8341 actacgaaac catcggcggc tttatgatgt ttatgctgcg taagatcccg aaacgcaccg
     8401 attcggtgaa attcgccggc tacaaatttg aagtggtgga tatcgataac taccgcatcg
     8461 accagctgct ggtgacccgg atcgacagca aggccaccgc cctttcgcca aaactgcctg
     8521 acgctaaaga taaagaagaa agcgtcgcgt aacccccaga aacatcaacg gctcctgaat
     8581 caggagccgt cttattactg catagcactt tggttaagcc atctctgttt gcagacgcat
     8641 aacctgacgg ttaacttcgg acatcactga caaatgcagc ttatccttca cttttgggat
     8701 aagaatctta cccttatcaa attcaaaagc gccaacgtcc ttgatgtata accgtccacg
     8761 gaacaggatc tttacgtact tcgccacctg aagtgggttg taccgttgga aaattttcat
     8821 tgttatctcc tgctgagtat tacgcctgtg cggtgccaca atcggcccaa ctattatgag
     8881 acgcaaattt taatgcttag tgactataga ctatccgggc aatgtttcca ccgcgtataa
     8941 ctttttttac ctaaaggtta caattattca gaattatctt tttaccgaag cgcggtcttc
     9001 agtataagca ttcatttttc atatgatttg tgcgcttgac cgcaaactgg catcacactt
     9061 gcgggaaatt cgataaatag cacatatgat taaaactcag atccaagtgg tcggatcacc
     9121 tgcatatcat aagaaggaaa caccatgacc ctacgcaaga ttctggcact cacctgcctg
     9181 ctgttgccga tgatggcttc cgcacatcag ttcgaaaccg gtcagcgagt gccgccgatt
     9241 ggcattaccg atcggggcga gttggtgctt gataaagatc agtttagcta caaaacctgg
     9301 aacagcgcgc agttagtggg aaaagtgcga gtactgcaac atattgctgg tcgcacctct
     9361 gcaaaagaga aaaacgcgac gctgattgaa gcgattaaat cagcaaagtt accgcacgat
     9421 cgttaccaga ccaccaccat tgttaacacc gacgacgcaa ttccgggttc cggcatgttt
     9481 gtgcgcagca gtctggagag taataaaaag ctttatccct ggtcgcagtt tattgtcgat
     9541 agcaatggcg tcgcgcgcgg tgcctggcag ctggatgaag aaagttccgc tgtagtggtg
     9601 ctggataagg atggtcgcgt gcaatgggcc aaagacgggg cgctcacaca ggaagaggtg
     9661 cagcaagtga tggacctgct gcaaaagttg ctcaaataat ggcaataaca taaattctgc
     9721 aaaaataatt ttcccctatc gttatctatg ggatagggga attaggtctc tgagctctta
     9781 caccgaactc atactggtaa cgctagttgc tcttttttaa acgcctcaat ggttgattta
     9841 tatttctcgc aaatctcctc ttcggtaata tcactatcta cggccagatt cgcacttact
     9901 atcgcatcca cttgttcggc taattcgact tgttggcaac ctgcattaac cagaaaatta
     9961 taaataagag agtaatcttc atcctccaaa acaacagagg aaccattacg aaaacgttca
    10021 tcccctccat agattttaag cgcaaagccc aaagattcta tgactatggc aaaattatca
    10081 tcaattattt tttcgtaaat ataccatcca tcgcattctt taattccacc tcctggtatt
    10141 tggagttcaa atttaccccg ttttaatttg cttactatat cctccaataa ggcataacct
    10201 aaagacacgt caccaatcgc ctggtgaata taacctttaa tccttttcgg tatgtcagac
    10261 tgttttttct gcagaatatc ccaagcatac aatcttctgt tttgttctaa cggaaattca
    10321 cggtttttga aatccatgaa tgagttatac tcatttattg ttatggggat ttcttcgtat
    10381 tcaaatccac tgcctcgcaa tgtcattgta tattcggcac cgttatcttt aaggctgaaa
    10441 ctgataagaa acttatccat ggctttaaca gtttcatttt ttgatgaaag cacttgataa
    10501 ctatctttat caatctgagt tgcgcaacga aaaaactccc acaaagttaa caggctatca
    10561 taattcgaaa cccaatcttt tttcttaaat gcatgctgaa tattattaaa aaaattgttt
    10621 gaatgtgttt ttgtatgcga tgattttacg aataactcca ccgcaccaat aaaattattg
    10681 tgtctgatcc tgggtaacat atggctacct tattttattt ggttatttta tgtcgccatt
    10741 aaatatctca ttatagaagt aaactatcaa aaaacgctca ttattaaaat gtaacttatt
    10801 agcaattgaa tttttgcact ttaaatacaa tctcttttta tttataactt tttaggttgg
    10861 gagaaatcag gatggcagaa tcaggaaata cactgtttct gccatctgaa tttagtaaat
    10921 agacactctg aacccaggat tcaggaacga ctcgcgcgga gtgtaatcca gcggtttacc
    10981 ctgccagtcg tgaacgtgcg ctccggcagc tgcggccaca gcatgtccag cggcggtgtc
    11041 ccaaatattc gttggtccga agcgcgggta cagctgcgcc tgtccttccg ccaccaggca
    11101 gaatttcagc gaagagccga tggacgtggt ctgatgttcg ccaagctgtt gcagatactc
    11161 tttcagctcc gcatctgcat gggaacggct gataaccacc agcggcgggc gcgcatcgcg
    11221 gacctgaatc tgcttgcgca caccgcactc ttctttccag gccttgcctt ctgccgcgct
    11281 gtacattacg ttcattaccg gcgcatacac cacacctaaa atcggtttgc catggtcaat
    11341 gagcgcaatg ttaacggtga attcgccatt gcgtttaata aactctttag taccatccag
    11401 cgggtctacc agccagtaac gctgccagtg ctgacggact tcccaaccgg gaggatcttc
    11461 ttcagaaagg accggaatat ccggtgtcag cgtacgtaaa ccgtccatga taacggtgtg
    11521 tgcggcaata tccgctgccg ttaccggaga attgtccgct ttgctgacga cgtccatcgg
    11581 tttcgtcccg tcgtagacct gcataatggc atcgcctgca ttccgtgcaa gctggcatac
    11641 ttgatctaac atttctccac ctcgtctctg tgagcggtgt taacttattg ttttacttat
    11701 accctatcgt taatgaatgc gccaactgtg atagtgtcat cattttcaaa gcgtaaaatt
    11761 gtggcattct tcactgttct ataagtaaga cgtttattct cccttttctt tcgtattccc
    11821 gatgataaaa ggatgtccct gatgattaag tttagcgcaa cgctcctggc cacgctgatt
    11881 gccgccagtg tgaatgcagc gacggtcgat ctgcgtatca tggaaaccac tgatctgcat
    11941 agcaacatga tggatttcga ttattacaaa gacaccgcca cggaaaaatt cggactggta
    12001 cgtacggcaa gcctgattaa cgatgcccgc aatgaagtga aaaacagcgt actggtcgat
    12061 aacggcgatt tgattcaggg gagtccgctg gccgattaca tgtcggcgaa aggattaaaa
    12121 gcaggtgatg ttcatccggt ttataaggcg ctgaatacgc tggattatac ggtcggtaca
    12181 ctcggcaatc atgaatttaa ctacggtctg gattacctga aaaatgcgct ggcgggagcg
    12241 aaattccctt atgtaaatgc caacgtcatt gacgccagaa ccaaacagcc aatgtttaca
    12301 ccgtatttaa ttaaagatac cgaagtggtc gataaagacg gaaaaaaaca gacgctgaag
    12361 attggctata ttggcgtcgt gccgccgcaa atcatgggct gggataaagc taatttatcc
    12421 ggaaaagtga cggtgaatga tattaccgaa accgtgcgca aatacgtgcc tgaaatgcgc
    12481 gagaaaggtg ccgatgtcgt tgtcgttctg gcgcattccg ggctgtctgc cgatccgtat
    12541 aaagtaatgg cggaaaactc agtttattac ctcagtgaaa ttccgggcgt taacgccatt
    12601 atgtttggcc atgctcacgc cgttttcccg ggtaaagatt ttgctgatat cgaagaggct
    12661 gatatcacca aaggcacgct gaatggtgtt ccggcggtaa tgccgggcat gtggggcgat
    12721 catcttgggg tggtcgactt acaactcagt aatgacagcg gtaaatggca ggtgacgcag
    12781 gcgaaagcgg aagcacggcc gatttacgac atcgccaata aaaaatccct cgcggcggaa
    12841 gacagcaagc tggtagaaac actcaaagcc gatcacgatg ccacacgcca gttcgtcagc
    12901 aagccaatcg gtaaatctgc cgacaatatg tatagctatc tggcgctggt gcaggacgat
    12961 ccgaccgtgc aagtcgtgaa caacgcgcaa aaagcgtatg tcgaacatta cattcagggc
    13021 gatccggatc tggcaaaact gccggtgctt tcagctgccg caccgtttaa agttggtggt
    13081 cgcaaaaatg acccggcaag ctatgtggag gtggaaaaag gccagttgac cttccgtaat
    13141 gccgccgatc tttatctcta ccccaatacg ctgattgtag tgaaagccag cggtaaagag
    13201 gtgaaagagt ggctggagtg ctccgccgga cagtttaacc agattgatcc taacagcacg
    13261 aaaccacagt cactcatcaa ctgggatggt ttccgcactt ataactttga tgttattgat
    13321 ggtgtgaatt atcagattga tgttacccaa cccgcccgct atgacggcga gtgccagatg
    13381 attaatgcca atgcagagcg gattaagaac ctgaccttta atggcaagcc gattgatccg
    13441 aacgctatgt tcctcgttgc caccaataac tatcgcgctt acggcggcaa atttgccggt
    13501 acgggcgaca gacatatcgc ttttgcttca ccggatgaga accgctcggt gctgacagcg
    13561 tggattgctg atgagtcgaa acgtgcggga gaaattcacc cggcggcaga taacaactgg
    13621 cgtttagcac cgatagctgg cgataagaaa ctggatatcc gtttcgaaac ttccccgtca
    13681 gataaagccg cagcgtttat taaagagaaa gggcaatatc cgatgaataa agtcgcgacc
    13741 gatgatatcg ggtttgcgat ttatcaggtg gatttgagta agtaaaacac ttctttttcg
    13801 gtctataaat tatcaaccgc atccggcatt tattggcgga tgcgatgctg gcgcatctta
    13861 tccgccctac cagccatgca ccgtagacca gataagctca gcgcatccgg cagttatgcc
    13921 gcatgttcat cccgcaccgc caacacctcg ggcaaattca actcaatcca gtccgccagt
    13981 gcagcaacct tttcgctcac ctgctcgccc agcggcgtga ggctatattc cacatgcggt
    14041 ggcaccaccg gatacgcgat acggttaaga aaaccatcct gttctaacgc ctgtaacgac
    14101 tgcgcaagca tcttttcgct ccccccgccg attttgcgcc gcaggtcgct aaagcgatga
    14161 gtaccttcgc gtagcgccac cagaatcaac accccccaac ggctggtgac gtgtttcaac
    14221 acctcgcgcg acgggcactg ttccgcaaag agattaccct ctttcagttg ttgcgacagg
    14281 ctaacctgac tcatttcata cttacctttt tgtacgtact tactaaaagt aagtttaggt
    14341 gttagcgtat ttaaacacaa gacaaaacga tggagacttc ccatgatcgc tattactggt
    14401 gccactggcc aacttggtca ctatattatt gaatccttga tgaaaacggt tcctgccagc
    14461 caaatagtgg ctatcgttcg taatccggca aaagcccagg ctctggcagc acaaggcatt
    14521 accgtgcgtc aggctgacta cggcgatgaa gccgcactga catctgcact tcagggagtg
    14581 gaaaaactac tgctgatctc ttccagcgaa gtgggtcaac gtgccccgca gcatcgtaat
    14641 gttattaatg ccgcaaaggc ggctggcgtg aaatttatcg cttataccag cctgctacat
    14701 gcagatacct ccccgctcgg cctcgccgat gagcacattg agacggagaa aatgttggct
    14761 gattctggca tcgtttacac cctgctgcgc aacggctggt acagcgaaaa ctacctcgcc
    14821 agcgccccgg cagcactgga acacggcgta tttatcggtg cggcgggcga tggcaaaatc
    14881 gcctcagcaa cgcgggcaga ttatgcggca gctgcggcac gcgtgattag cgaagccggt
    14941 cacgaaggca aggtttacga actggcgggc gatagtgcct ggacgttgac acagttagcg
    15001 gcagagctga ccaaacagag cggcaaacag gttacctatc aaaatctgag cgaagccgat
    15061 ttcgccgcgg cactgaaaag cgtcggactg cccgacggac tggcggatat gctggcggat
    15121 tctgacgttg gcgcatcgaa aggtggtctg tttgataaca gcaaaacgct tagcaaattg
    15181 attggccgcc caacgacaac gttagccgaa agcgtaagcc atctttttaa tgttaataac
    15241 tagttaatta aagtggcatc ctcccgcatc ctctctaata atgacgggat gccgggagca
    15301 atcatgtctg cttcctgaac tttcttctga cagaccaatg gatgccagta atgattagcg
    15361 gcgtgctgta cgccctgtta gcagggttga tgtgggggct tatttttgtc gggccgttga
    15421 tcgtaccgga atacccggcg atgttgcagt cgatggggcg ttatctggcg ttagggttaa
    15481 ttgcgctgcc cattgcctgg ctgggacgcg tgcgtctgcg tcagttggcg cgtcgcgact
    15541 ggcttaccgc cttgatgctc actatgatgg gcaacctcat ctattacttc tgccttgcca
    15601 gtgccattca acgtactggt gcgcctgttt ccacgatgat tatcggcacc ctgccggtgg
    15661 tgattcccgt ttttgccaat ctgctttata gccagcgcga cggcaaactc gcgtggggaa
    15721 aactcgcccc ggcactggtt tgtattggca tcggcctggc gtgtgtgaat attgctgagt
    15781 taaaccacgg actccccgat tttgactggg cacgttatac ctcaggcatc gtgctagcgt
    15841 tagtttccgt ggtctgctgg gcatggtatg ccctgcgcaa cgcccgctgg ctgcgggaga
    15901 atcccgacaa acatccgatg atgtgggcga cggcgcaggc gctggtcaca ctgccggttt
    15961 ctctcatcgg ctatctcgtc gcctgttact ggctgaatac gcaaacgccg gacttctccc
    16021 taccttttgg cccccgtccg ctggtgttta ttagtctgat ggttgcgata gccgtgcttt
    16081 gctcatgggt tggcgcactc tgctggaacg tcgccagcca gcgattaccg acagtgattc
    16141 tcgggccgct gatcgttttc gaaacactgg caggtttgct gtacaccttt ttgatacgcc
    16201 agcaaatgcc gccgctgatg acgctgagcg gtatcgcgct gttagtggtt ggcgtggtca
    16261 ttgtagtcag agcaaaaccg gaaaagcctt taactgaatc tgtctcagaa agttgacata
    16321 ctggctgtga gttaaataag cctctgctac gtaagggtta tagcttttgc cttaaagatg
    16381 tatttaaaat acatcttatc ttattaagaa tgaggtatca gctatggctt atcgcgacca
    16441 acctttaggt gaactggcgc tctctattcc tcgcgcttca gctctgtttc gtaaatataa
    16501 tatggattac tgctgtggcg gtaagcagac gctggcgcgc gcggcggcac gtaaagaact
    16561 ggatgttgag gtcattgaag ctgaactggc aaagcttgct gaacaaccga ttgagaaaga
    16621 ctggcgtagc gccccgctgg cagaaatcat tgaccatatc atcgtgcgct accacgatcg
    16681 tcaccgcgag caactgccgg agctgatcct gcaagcgact aaagtcgagc gcgttcacgc
    16741 cgacaaaccg agcgtgccaa aagggctgac aaaatacctg accatgctgc atgaagagct
    16801 ttccagccac atgatgaaag aagagcagat cctcttcccg atgatcaaac aaggcatggg
    16861 cagccaggca atggggccaa tcagcgtaat ggaaagcgag cacgatgaag cgggcgaact
    16921 gctggaagtg atcaaacaca ctaccaataa cgtcacaccg ccgccagaag cctgcaccac
    16981 ctggaaagcg atgtataacg gcattaatga actgattgat gacctgatgg atcacatcag
    17041 tctggaaaac aatgtactgt tcccacgcgc gctggcgggt gagtgatcta aaagctggat
    17101 ggcattgcgc catccagcat gataatgcgg ttatttccgc agttcagcag cccgcttctt
    17161 accaataaac aaccagccca gccccagtgc gataaaccac agcggggtaa ccagcagcgc
    17221 ctggcgagtg tcatcttcca gtgtcagcaa cacgaccacg aacacaaaga acgccataca
    17281 tacccagcac atcagcttgc cgagcggcat cttgtagatc gacttctcat gcagatgagg
    17341 acgctgtttg cggtacacca ggtacgagca aaggataatc gtccagacga acataaacag
    17401 aatcgcggaa acggttgtaa tcatcgtgaa cgcaccaatc acgctaggat tcacatacag
    17461 catcaccacg ccaccgagca ggcagatgca ggagaaggtc agccctttcg ctggtactgc
    17521 gcgcttagaa agtttagcga acgctttcgg tgccacacct tcctgcgcca gaccaaacag
    17581 catacggctg gtagagaaga cgccgctgtt agcggaagac gccgcagagg tcagcaccac
    17641 aaagttgatc acgctggcag ccgcaggcaa acctaccaac acaaacagct caacgaacgg
    17701 gcttttctcc gggactaccg aactccacgg tgtcacggac ataatcacaa tcagcgcgaa
    17761 gacgtagaac ataatgatac ggatcggaat ggagttaatc gcgcgtggca gtgatttctc
    17821 cggatctttg gtttccgcag ctgttgtacc taccagctca atccccacga aagcgaaaac
    17881 cgctatctgg aatccggcaa agaagccact taaacctttc gggaaccagc cgccgtcatt
    17941 ccacaaatgc gcgaatgacg cttccacacc agtcggtgac tgaaagtgca tcgccaccat
    18001 gaccaggccg acgacaatca gcgacacgat ggcgacgatt ttgatcatcg caaaccagaa
    18061 ctccatctca ccgaacattt tcacggtggc aaggttgagc gtcagcagca gcactatcac
    18121 cgccagcgag gcgacccagt cggagagatc ggggaaccag aactgagcat aagccgtgat
    18181 cgccaccacg tctgccatac cggttacaac ccagcagaac cagtaagtcc agccagtgaa
    18241 atatcctgtc cacggcccga gtaaatcgga agcgaagtca ctaaaagatt tgtattccag
    18301 attcgaaagc agcaattccc ccattgcccg catcacgaaa aagagcataa aaccaatgat
    18361 catataaacg aaaatgatcg acggcccggc aaggctaatc gttttgccag accccagaaa
    18421 caaccccgta ccaatggcac cgccaatggc aataagctga atatgtcggt ttgtgagatt
    18481 gcgccgtagc gactgttcag ccggagcctg atcatcggca acgactttta cctgatctac
    18541 catgtttttt tcttcctgta cctgtctgtg ttgttcaggc tctacggcct ttagtcagtc
    18601 tatgatacga cgaatctgta tcgggactca tcgatattag gtaacaatac gcgggatgaa
    18661 tactaagatt tagatctaat gttaatttta tgtttaaagt gagtgtcata tcacggtgat
    18721 aacgcgaaac atctcacaaa aatacacgct tacggggtct ttgcaacaca aaatagcgcc
    18781 gtttggcaaa ctgaagggtt tattgctgaa tgcctgctcc cctctggttc gaggggaaca
    18841 gaatgcgctg cttagaggat ttccagcagt tcgacttcaa acaccagggt gctgaacgga
    18901 gggatggatg cacctgcgcc gcgctcgcca tatgccagtt cctgcgggat agtcagttcc
    18961 catttagaac ctaccggcat cagagtcagt gcttcaatcc agccagggat cacgccgtta
    19021 accgggaatt cagcgggttc accacgagca acggagctgt caaacacggt gccgtcgatc
    19081 agtttaccgg tgtaatgaac acgaacgcgg tcggtacgtg ccggaattgc gccttcaccc
    19141 tggttgatca cgcggaattg caggccagat tcggtgctat tcacaccttc ttttttggcg
    19201 ttttcttcca ggtatttcac accttcagca gccatcgcct ggaaacgctg acgacgaacg
    19261 gcatcggcgc gttcgtggat ttcacgcagc gcgcgatgca ccacatcaac cggaacagcc
    19321 ggatgtttgc cttccagcgc atcggcaata cctgcaacca gtgcttctgg cagcagccct
    19381 tccaggccag attcactcag ttgttgccct acctgcaaac caatgccgta gcttgcttgc
    19441 gcttcgatgg tgtcaaaagt tggggtggtc atcgtatttc ctttcttagg gtataaaagt
    19501 agcgggcagc atatcagcca cacttctttg ggtaaaactt tgtcacagga atgatgacaa
    19561 atcccgggga aaaagaaaca atagcaatat cccgt
//
LOCUS       DAJVUK010000074        19559 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.074, whole genome shotgun sequence.
ACCESSION   DAJVUK010000074 DAJVUK010000000
VERSION     DAJVUK010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19559
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.074"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            6..81
                     /locus_tag="OQQ57_002364"
     tRNA            6..81
                     /locus_tag="OQQ57_002364"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Thr,seq:ggt)
     gene            121..236
                     /gene="rrf"
                     /locus_tag="OQQ57_002365"
     rRNA            121..236
                     /gene="rrf"
                     /locus_tag="OQQ57_002365"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(468..1226)
                     /locus_tag="OQQ57_002366"
     CDS             complement(468..1226)
                     /locus_tag="OQQ57_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HCS1957106.1"
                     /translation="MSQILLQPANAMITLENVHKWYGQFHVLKNINLTVQPGERIVLC
                     GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPH
                     LTVLQNCTLAPIWVRKMPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIAR
                     SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI
                     FMDRGEIVEQAAPDEFFTHPKSERTRAFLSQVIH"
     gene            complement(1234..2337)
                     /locus_tag="OQQ57_002367"
     CDS             complement(1234..2337)
                     /locus_tag="OQQ57_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HCS1957107.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
                     VLLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
     gene            complement(2347..3517)
                     /locus_tag="OQQ57_002368"
                     /pseudo
     CDS             complement(2347..3517)
                     /locus_tag="OQQ57_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026209.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
     gene            complement(3585..4658)
                     /locus_tag="OQQ57_002369"
     CDS             complement(3585..4658)
                     /locus_tag="OQQ57_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1957108.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTA
                     KERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL
                     DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQL
                     YALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQ
                     NVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESP
                     LKIKRGQNNLWNNGGIQYAPPVR"
     gene            complement(5089..5310)
                     /locus_tag="OQQ57_002370"
     CDS             complement(5089..5310)
                     /locus_tag="OQQ57_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957109.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGCLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIALSK"
     gene            complement(5563..8667)
                     /gene="acrF"
                     /locus_tag="OQQ57_002371"
     CDS             complement(5563..8667)
                     /gene="acrF"
                     /locus_tag="OQQ57_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
                     /protein_id="HCS1957110.1"
                     /translation="MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVS
                     VSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTNDSAGSVTITLTFQSGTDPDI
                     AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVAS
                     NVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQ
                     LGGTPALPGQQLNASIIAQTRLKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYN
                     VIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQ
                     LSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLS
                     AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENK
                     GGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEE
                     DQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAG
                     MAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFE
                     LIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALSV
                     SLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRMLPEDVDKLYVRSANGEMV
                     PFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGY
                     DWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLA
                     ATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLR
                     PILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFLPVFFVVIRR
                     CFKG"
     gene            complement(8679..9836)
                     /gene="acrE"
                     /locus_tag="OQQ57_002372"
     CDS             complement(8679..9836)
                     /gene="acrE"
                     /locus_tag="OQQ57_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HCS1957111.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYNSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK
                     GTVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS
                     SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR
                     AVFPNPQHTLLPGMYVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR
                     PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
     gene            10235..10897
                     /gene="acrS"
                     /locus_tag="OQQ57_002373"
     CDS             10235..10897
                     /gene="acrS"
                     /locus_tag="OQQ57_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HCS1957112.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIINGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS
                     VM"
     gene            complement(10900..11079)
                     /locus_tag="OQQ57_002374"
     CDS             complement(10900..11079)
                     /locus_tag="OQQ57_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 family protein"
                     /protein_id="HCS1957113.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(11163..12047)
                     /gene="yhdJ"
                     /locus_tag="OQQ57_002375"
     CDS             complement(11163..12047)
                     /gene="yhdJ"
                     /locus_tag="OQQ57_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HCS1957114.1"
                     /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN
                     IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
                     TIKSRIVWSYDSSGVQAKKHYGSMYDPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
                     DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDII
                     LDPFAGSFTTGAVAVSSGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
                     NLSKRSRLSEVDPDLIAK"
     gene            complement(12133..12429)
                     /gene="fis"
                     /locus_tag="OQQ57_002376"
     CDS             complement(12133..12429)
                     /gene="fis"
                     /locus_tag="OQQ57_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HCS1957115.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            complement(12455..13420)
                     /gene="dusB"
                     /locus_tag="OQQ57_002377"
     CDS             complement(12455..13420)
                     /gene="dusB"
                     /locus_tag="OQQ57_002377"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HCS1957116.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            complement(13749..14630)
                     /gene="prmA"
                     /locus_tag="OQQ57_002378"
     CDS             complement(13749..14630)
                     /gene="prmA"
                     /locus_tag="OQQ57_002378"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HCS1957117.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
                     DPVVEKEEWCRITGRKN"
     gene            complement(14642..16093)
                     /gene="panF"
                     /locus_tag="OQQ57_002379"
     CDS             complement(14642..16093)
                     /gene="panF"
                     /locus_tag="OQQ57_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HCS1957118.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVETLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
     gene            complement(16083..16325)
                     /locus_tag="OQQ57_002380"
     CDS             complement(16083..16325)
                     /locus_tag="OQQ57_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HCS1957119.1"
                     /translation="MDTRFVQAHKEARWALGLTLLYLAVWLAAAYLPDVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            complement(16418..17353)
                     /locus_tag="OQQ57_002381"
     CDS             complement(16418..17353)
                     /locus_tag="OQQ57_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1957120.1"
                     /translation="MGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSH
                     RAIFFGCVGNDDFGRLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQQRDFVFNI
                     PNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGTVSFDP
                     NIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGVKH
                     VAIKRAQRGASYYKLKNGTLHAQHVTGHDIEIIDPTGAGDCFGATFITLFLSGFPAHK
                     ALQYANASGALAVMRQGPMEGISSLADIEDFLQQH"
     gene            complement(17385..18215)
                     /locus_tag="OQQ57_002382"
     CDS             complement(17385..18215)
                     /locus_tag="OQQ57_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1957121.1"
                     /translation="MKSVNVPRKSSNLLKRRLKIAEIVATQGEIKVDDLSAQLGVSGV
                     TIRGDLSYLEQQGYLKRSFGGAIATPLSSEPEAIQPIAPLSLAQQMEIARHCARLIRD
                     RDTLFLGHGTICRKIIPLLSEVKKLRLITNDPEHALLANQFIDGEIILAGSEMLRPDT
                     ALAGKPLEQALQHFTITHSILEINHLDADGTLNINVPRLAAAWQLCFDHAQNKTVIVA
                     ADPAPSTAAIGHLHQAENVIVSRSINEQYQQQLQSADFVILYTSNECFTWSNRERLQE
                     "
     gene            18558..19412
                     /locus_tag="OQQ57_002383"
     CDS             18558..19412
                     /locus_tag="OQQ57_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose bisphosphate family class II aldolase"
                     /protein_id="HCS1957122.1"
                     /translation="MYIISSKNMLKKAQSEGYAVPAFNIHNLETLQVVVESAAQLRSP
                     VMLAGTPGTYRYGGVGSLISLVQSLAREYNLPLVLHLDHHEESDDIFNKVRAGIRSVM
                     IDGSHLPFEDNIARVQEVTTFCHRFDVSVEAELGRLGGQEDDLLVDEKDSAYTSPAAA
                     AEFVQRTQIDSLAVAIGTAHGLYAHEPRLDFVRLEQIRQRVEIPLVLHGASGLSEQDV
                     QHCIRRGICKVNVATELKIAFADALKGYFYNNPAANDPRHYMQPAKAAMKEVVTRIIG
                     VCGSEGKI"
BASE COUNT         5192 a         4901 c         4670 g         4796 t
ORIGIN      
        1 agcgtgctga tatggctcag ttggtagagc gcacccttgg taagggtgag gtccccagtt
       61 cgactctggg tatcagcacc actttttagg ttaaagttcg gcaaattaga aaagaatttg
      121 tctggcggca gtagcgcggt ggtcccacct gaccccatgc cgaactcaga agtgaaacgc
      181 cgtagcgccg atggtagtgt ggggtcttcc catgcgagag tagggaactg ccagacatca
      241 aataaaacaa aaggcccagt cttccgactg agccttttgt tttatctgtt gtttgtcggt
      301 gaacactctc tcgagtagga caaatccgcc gggagcggat ttgaacgttg cgaagcaacg
      361 gcccggaggg tggcgggcag gacgcccgcc ataaactgcc agacatcaaa tcaagcaaaa
      421 aggccatccg aaaggatggc ctttttgctt ttcgaactaa cattcaatta atggattacc
      481 tgcgataaaa atgccctcgt acgctctgat ttaggatgcg taaaaaattc atcaggtgca
      541 gcttgttcca ctatctcccc acgatccata aaaattaccc ggtcagcgac ggtacgtgca
      601 aaccccatct catgtgttac acacaacatt gtcatacccg actgcgccag cccaatcatc
      661 gtatccagca cctctttcac catctccgga tcgagcgccg acgttggttc atcaaacaac
      721 ataattttcg gcttcataca cagcgaacgc gcaatggcaa cgcgttgctg ctgaccacct
      781 gaaatctgtc cgggaaactt atgcgcatgt tcggcaattc tcacccgctc aaggtaatgc
      841 atcgccagag cttcagcctc tttcttaggc atcttgcgta cccaaatcgg tgccagggta
      901 cagttctgta aaacggtcag atgagggaag agattgaaat gctgaaatac cattcccact
      961 tcttgcctga cgcgctcaat attgcggata tcttcattaa gttcgatgcc atctacgaca
     1021 atccgtccct gttgatgttc ttccagatga ttaatacaac gaatggttgt cgatttaccg
     1081 gaaccagaag ggccacacag aacgatccgt tctcccggtt gcacggttaa atttatattt
     1141 ttcaaaacat ggaattgtcc ataccattta tggacgtttt ccagcgtaat catcgcgtta
     1201 gcaggttgca gtaaaatttg gctcatagtg tcctcaatgc ggtgtacgcc cggtgttaaa
     1261 acgtttttcc agatgttggc tataacgtga catgctgaaa caaaagatcc agtagatcag
     1321 cgcggcgaaa acataccctt ccgtcgacat acccaaccag gcgggatcaa cggttgcctg
     1381 ctgaacgcta ctgaaaagat cgaacaagcc gatgatgatc accaggctgg tatctttgaa
     1441 gagtgcgatg atggtattta ccagcccagg aattaccagc ttcaacgcct gtggcagaat
     1501 aaccagcccc tgagttttcc agtaccccaa cgccagcgac tctgccgctt catattgccc
     1561 tttaggtagg gcctgtaatc cgcctcgcac gacttccgca acatatgctg actgaaacag
     1621 gatcacgcca accagcgcgc ggatcagttt gtcgatactg gtgccttctg ccataaacaa
     1681 cggcagcatg accgaagaca taaacaatac ggtaatcagc ggtacgccgc gccagaactc
     1741 gataaaaatg accgataaga tacgcacaat cggcatatgg gagcggcgac ctaacgccag
     1801 taagatcccc cacggtagcg cccccgcaat cccaacggat gcaataatta aagttagcgt
     1861 cagcccgccc cattgccggg tttcaacccg ctcaagacca aaaaaaccgc catacatcag
     1921 ccaccagaca atcagtgggt aaatcaccgc ccagaccgca atatagcgac cgcgatgcgg
     1981 gagtattttc cagaacattg gtgcgattga cacaaggcca atcagtaata ccaggttaat
     2041 tcgccagcgt tggtcgtgtg ggtaaagtcc atacataaac tgaccaaatc gttcgtggat
     2101 gaagacccaa caggcaccgg cttttgtgca gtcggcacgc gttgagccaa cccagttagc
     2161 ctgcaaaaat gcccagttca gcaacggtgg gatcagttcc cacatcaacc atatgcagcc
     2221 aatagtcagc aggctattgc tccagctgga gaacagattt tttcgcaccc acaccatcgc
     2281 gcggcttgag ttatggctcg ctgggcgcga gggctgagac agcaatactt ttgtcatcat
     2341 gactccttag cgttcaacga tcgcgatgcg gcggttatag atattcatca gcagcgagat
     2401 agtcaggctg ataatcagat agaccgacat ggtcatggct atcgtctcga tggcttgccc
     2461 cgtctggttc agcacggtgc cagcaaacag cgaaaccata tcgggatagc caatagcggc
     2521 ggcaagagag gagtttttga cgatgttgag atactggctg gttaacggcg gaataatcac
     2581 tcgcagtgcc tggggaataa tgacctggcg tagcgtaacc ccagtgaccg agccgcttca
     2641 tgttgaccat aaggcactgc ctggatccca gcgcggataa tctcggcgat aaatgcagag
     2701 gtataaaccg aaagtgccag cgttaaggct gccagttcag gaattaaaac cattccgccg
     2761 cggaagttaa agcctcgtag ggctgggaca tcccagtgta gtgctgcgcc aaaaagccat
     2821 tgcgccagta aaggcaaacc gatgatcaac actgcggcga acggccaggt gcggcgcagt
     2881 tgtccggtct ttatctggta tgttttatta aagcggaata gcccaacaga aaggactata
     2941 gccataacaa cagccaggat aaacgcaata aatccgtctc ccagctgcgg tgacggaata
     3001 taaagcccac gattgctcaa aaaggccaga tcaaacgcgc tcacagcctg gcgcgtggtc
     3061 cgggcaaatt gcgcaacacg gcaaagtacc agaagaagat ttgcagcagc gggggaatat
     3121 tacggaagat ctcaatataa attgtggata gctttcgtag cagtcagtta tccgaaagtc
     3181 tcgtcagacc gataaagaag cctaaaacag aagcgaacac aatacacaat gcagaaacca
     3241 gtagcgtatt gagtaagccg acaataaaaa cgcgtccgta ggtgtcgccc tgctggtaat
     3301 cgatcaaatg ctggacaata ccgaagccag cgccgcgatc cagaaaggca aaacctgaag
     3361 taatgccacg attactgaga ttcgttacag tgttgtgaaa taaccaacca acaattccga
     3421 caacagcaac aacggcaagg atctggaata accaggcacg aaccgtaggg ttggcaaagg
     3481 agagtgagcc tttaacggtt gagcggcgat gagacataga aacctcggaa agcataacgc
     3541 tgaagagagc gccgccgtag cgacgctcgt tacctcacac cgacttaacg cacgggcggc
     3601 gcgtactgaa taccgccgtt attccagaga ttattttgcc cacgtttaat tttcagcggg
     3661 ctttctgaac ctacgttacg ctcgaaaatt tccgagtagt tacccacctg tttgatgatg
     3721 ttataggccc atttattatc caacttcaga tccttgccgt aatcgccttc tttacccagc
     3781 agatgtgcca tatcaggcgt tgctggatta gccgcttttt catcgacgtt ctgggaattg
     3841 atgcccatct cttcagcatt cagcatggcg aaaagcgtcc agcgtacaat cgagaaccat
     3901 tcatcatcgc cacgacgaac taccggccca agcggttctt tagagataac ctccggtaag
     3961 acaatccatt cagctgggtt gcttaatttg atgcgcaggg catacagttg cgactgatcc
     4021 gaggccagcg tatcgcagcg accagattcc agtgccttcg ctgattcgtc agagcgatcg
     4081 aaagtcaccg gtgtgtactt catattgttt gccttgaaat agtcggcaac gttgagttcg
     4141 gtatcagtac ccgcctgaat acagacggta gcgccatcca gttctttcgc gctttttagc
     4201 cccgctttat cgtgcgtcag gaagccaatg ccgtcgtaat aagtgacgcc agtaaatgcc
     4261 attcccatcc cggcgtcgcg agatgaagtc caggtcgtat tacgggagag caaatccact
     4321 tcccctgact gtaaagccgt gaagcgttct tttgctgtga gtggggtata tttcactttc
     4381 gtgtcgtcac caaatacagc agcggcaaca ctacgacaaa catcaacatc aacatcaaca
     4441 tcaacatcaa catcaacatc aacatcaaca tcaacatcaa tacctgaaaa cttaccgtct
     4501 gcatcggcat aagagaaccc aagtaatcca tcactgatcc cgcattgcac aaaacctttt
     4561 ttctgaacgg catcaagcgt cgcgccagca tgcgcctgat ttgcaacggc aagcagcacg
     4621 ctggcggcag ccagtgtggc tatcatcatc tttttcataa tgcttcctgt gaggcgaaaa
     4681 ttatcgttat aggacgtttg ggaaacgtct tttacctgtc tgtggccatc ctcttataag
     4741 caaaagtagt gccagctttt gcgcacgatt tcgcgtcgca ataagctgag tgtagacagg
     4801 aaataataaa aacagcgccc cgcaatggtg cgaaaatgaa acatgcgcca cattttggcg
     4861 caaaatattt acgcgtgttt tactaagcag aataatgatt gttagcgtga gtatatttct
     4921 ggtgggaagt gtgaaagtta aattgatgcg ttatttcgaa agcagcgaaa taacgcgata
     4981 taacatgcta aatcagcaga gaattagcca gcagaatata gcaatatttt atcttatgta
     5041 aagatactgt atcgttaaac agagcgcgaa actccgcgcc ctgttcagtt atttcgacag
     5101 agcgatgatc cccatcgtca ggccagcaac agccgctgcc ccgccggcaa tagccccagc
     5161 cgtttcccag ttatcctgag tcgtgccttt catacaggta ttggtgtgaa ccagacaacc
     5221 ctgatcgtca taaaccggaa cgcagggcga atcgtgagca cagcccgcca gcaatgcggt
     5281 gagcaatgcc acaggaatta atcttttcat ggtgttacct cagtaataaa cgctaacgct
     5341 taataagtta actctcttat taacgagctg aatgccattt tatcaccgga ggttataaat
     5401 attgcggaat gaataatgac aaattatgtg aattgtaaaa atagtgaagg gagcgggaac
     5461 tatagaaagt ttttaaagag tgagtggaag aatatcttat taatttttat gggtttcact
     5521 gaaaataata aaggcacccg aaagtgcctt tatgtttctg atttatcctt taaagcaacg
     5581 gcggatcacc acaaagaaca ccggtaggaa gaagattgcc agcaacgttg cagagaccat
     5641 tccgcccatt accccgatac ccactgcgtt ctgcgcgcca ctgcctgcac cgttactgat
     5701 agctagcggt aatacgccga gaataaaggc gagagaggtc atcaggatag gacgcagacg
     5761 catacgtact gccattagtg tcgcttcaac aacaccttta ccctctttct ccatgagatc
     5821 tttagcgaac tcaacaatca aaatagcgtt tttggccgac aagccaattg tcgttagcaa
     5881 gcccaccata aagtagacgt catttttttg attaaagagt gtcgccgcca gcagcacgcc
     5941 gacaatccct aacggcacga ccaacataac cgagacagga attgaccagc tttcatagag
     6001 tgcagcaagg cacaggaaaa caaccacaaa ggaaattgct actagagcgg gagcctggtt
     6061 tcccgataag cgttcctgat acgacatacc cgtccagtca taaccaatgc ccgcaggtaa
     6121 ttttgacgca aggttttcca tcaacgccat ggcatcgccg gaactggttc ctggcgcggc
     6181 ttccccctga atctccattg acggcagacc gttgtagcgt tccagtcgcg gagagccata
     6241 cacccaatgt gaagtggtaa aggccgagaa tggcaccatt tcgccgttgg cgctgcggac
     6301 ataaagttta tcgacatctt ctggcagcat acggaatttg gcatccgcct gaacatacac
     6361 ctttttcacg cgaccacggt cgatgaagtc gttaacgtaa gtcccaccca acgccgttga
     6421 aatggtctga ttgatgtcag aaagtgaaac acttaatgcc tgcgcctttt cctggtcaac
     6481 ttccagttta aactgcgcgg tgtcttccag gccattagga cgcacgctga ctaagctggc
     6541 aggatgttgc gccgccatac caagcaactg gttacgggcc tgggttaggg catcgtgacc
     6601 cagcccagcc tgatcaatta actcaaagtc gaaacccgtt gccgtgccca gttcaacaat
     6661 ggctggcata ttgaatggaa tgacaaaacc gtcgcggatc ttgcccaatt ccattttggc
     6721 acgatggatt accgcttccg cactgttttc atcaccatta cgctcttccc acggtttcag
     6781 actgacgaag gccataccgg cgttttgtgc ctggccgctg aagctaaagc cgttaaccgt
     6841 aaagacactt tcaacgttcg ctttctcgtt cttcagatag taatccgtca cttgatccaa
     6901 cactttttgc gtccgctctt gcgtcgcgcc agcgggtaac tgaatcatgg tcagaaagac
     6961 accctgatcc tcttcaggta agaaggaaga cggaagacgt aaaaacaaca ccaccattcc
     7021 tgcaacaatc agcgcataga tcagtaaata tcgtcctgtg gaaccgagga ttttgccgac
     7081 gctgttggtg tagtggttaa cgctatgatc gaaggtggta ttaaaccagc cgaagaaacc
     7141 gcccttattt tcgtgatgct cagcagagac gggtttaagc agcgttgcac ataacgcagg
     7201 ggtaagaatc aatgccacca gaacagaaag tgccattgcc gaaacgatgg tgatagagaa
     7261 ctggcgataa attgccccag tagaaccgcc gaagaatgcc atcggaataa ataccgctga
     7321 cagcaccatc gcgataccca ccagtgcgcc ctgaatttgc gacatcgatt tttccgtcgc
     7381 ttcttttggc gggagcttat cctccatcat cacgcgctcg acgttctcca ccaccactat
     7441 cgcatcatcg acgagcagcc cgatggcaag caccatcccg aacatcgtta gtgtgttgat
     7501 ggagtaacca aaagcggcga ggatggcaaa cgtccctaac aacaccacgg gtaccgcaat
     7561 ggtggggatc agcgttgctc gcatattctg caagaacaga tacatcacca ggaacaccag
     7621 cataatggct tcgaacagcg tttttaccac ttcgtgaata gaaagctgga cgaatggcgt
     7681 ggtgtcataa gggtagagaa ccttcattcc ctgcgggaag aatggctgta attccgccag
     7741 ttttgcctta atggctttcg cggtatcgag agcattcgcg ccggttgcca gcttaatccc
     7801 caggcccgcc gccggttttc cgttgatacg agcgataacg ttatagtttt caccgccaag
     7861 ttcaacccgt gcgacatctt tcaggcgtac caccgagccg tcactgttta cgcgcagggt
     7921 cactttgccg aattcttccg gattttttaa ccgcgtttga gcaataatcg aggcattcaa
     7981 ctgttgccct ggtaacgctg gcgttccgcc caactgtccg gcagcgatct gatcgttctg
     8041 taccttcaac tggttaatca catcaaccgg tgtcagttta tatttgttta gcagatcggc
     8101 gtccagccag atacgcatcg catactgtgc gccgaaaagc tgtacgtcac cgacgccatt
     8161 cagacggcta agcgtatctt taacgttaga ggccacatag tccgagatat cgtcctgtgt
     8221 ggtgcctggg ttatcagaga caaaacccgc caccatcaaa tagctgctac tggacttttc
     8281 aacactgatc ccctgctgct gaacctcctg cggcagcaac ggcgtggcga gctggagttt
     8341 gttctgcacc tgcacttgcg cgatatcagg atcggtcccg gactggaagg taagggtaat
     8401 tgtcacgcta ccggcggaat cgttggtgga ggacatatac atcaggttat cgataccatt
     8461 catattctgt tcgataacct gcgtcaccgt atcctgcacg gtctgcgcat cagcacctgg
     8521 atagtttgcc gaaacagaaa ccgcaggcgg tgcaatggtt ggatactgag cgacgggcaa
     8581 ttgtaggatc gccagtgcgc ccgccatcat cagaataatg gccagcaccc atgcaaatat
     8641 cggtcgtcga ataaaaaagt ttgccatgtc agattacctt acttcgatgc agtatctgcg
     8701 ggggtatcgg tagtggcttt aacctgctct cccggacgcg ctttttgcag gccgctgaca
     8761 atgacttgat cgccagattt cagaccttcg ctaatcaacc atttatcgcc aatcgcctga
     8821 ctggcaacga cagggcgcgc ttccacctga cttttatcgt taacaatcag cacggttgca
     8881 tcaccacgcg gtgtgcggct aacgccttgt tgcgggataa gaatggcgtc aggttggacg
     8941 ccttcatcaa tccgtgcacg cacatacata cccggcaaaa gcgtatgttg cgggttaggg
     9001 aagacagcac gtagggttat ggagccggtg ctttcatcaa cggtcacatc agagaattgc
     9061 agcgtacctt tcaggggata ggtttgaccg ttttccatga ccaactctac gttgctggtg
     9121 gcgttttcct tatgcaaatt tccttgctct acggattgct tcagcctcat aaaatcgttg
     9181 ctggattggg tcacatcaac gtagatagga tcgagctgct ggacagtcgc cagttcagtc
     9241 gtttgcccat tagtgacaag agcgccttcg gtcacggtcg atttgccgat acgtccgcta
     9301 attggcgcag tcactttggt ataagcgaga ttgatgcgag cgctttcgac tgtgcctttt
     9361 gcggcaatca cggcggcatc ggcctggcga gcatcagcaa tggcctggtc gtactcctgc
     9421 tggctgatgt atttcgtacc cacgagcgga acgtaacgtt ttaccgtcaa atgcgcgatg
     9481 gcggcggcgg cttcactttt cgccagttcg cctttcgcgc tgttataatt tgcctgatag
     9541 gtcgcgggat cgatctggta cagggactgg cctgcttgta catcgctgcc ttcagtgaaa
     9601 ttacgattca gtacgatccc gctaacctgt gggcgaactt cggctatacg gtaagcattg
     9661 gtgcggcctg gtaattcagt cttaacttct aacggggccg ttttcacaat atgaacggta
     9721 acctgcggtt caccgacgtg agctttctct tctcccttat cgttacaacc ggcgattaaa
     9781 gccgcggaga tcagaataaa ggagggcagg aggaaaaacc tggcatgttt cgtcattact
     9841 attcctcaaa aaaccaaaag cgcgttattt acccagaaag gcaacgcgtt aactcgcaga
     9901 aagaaaaata cagtttgcta tcctacaaat tatcattcgt cgatgtaagg aatagttatg
     9961 aatactggcg tctcaaggca cataaacaca aaaaaagatt aatattctac tgttttattt
    10021 tgacgcgggt tgaaagaggc agaattaaaa cctcgtaaat tgaaatatat attcatgtgg
    10081 cgaatgtatt ttaggtaaat aatatacatt gtttatttga cgatttatag caactcaatg
    10141 ttaccctctc gtataaatac acattagatg atagattaac cttcgctatt ttctcaccct
    10201 gtgtcgaata tatttatttc ctgaataatt aatcatggca aaaagaacca aagccgaagc
    10261 tctgaagacc cggcaagaac tgattgaaac tgccatcgcc cagtttgcgc agcatggcgt
    10321 aagcaagacg acgctcaacg acattgccga cgccgctaac gttacgcgtg gcgctatcta
    10381 ctggcacttc gaaaacaaga ctcaactgtt taatgagatg tggttgcaac agccttcatt
    10441 gcgggagtta atccaggaac acttgacggc tggattagag catgacccgt ttcaacaatt
    10501 gcgtgaaaaa ttgattgtcg gcttgcaata tattgccaaa attccccgcc agcaggcgtt
    10561 gctgaaaatc ttatatcaca aatgtgaatt taatgatgag atgctggccg agggagtgat
    10621 acgcgaaaag atgggcttta atccgcagac tctccgcgaa gtattgcagg cgtgtcagca
    10681 acaaggttgt gtagcaaata acctcgattt agatgttgtg atgattatta ttaatggtgc
    10741 cttcagcgga attgttcaaa actggttaat gaatatggcg ggttatgatc tttataaaca
    10801 agcacccgcg ctggtcgata acgtattaag aatgttcatg ccagatgaaa acataacgaa
    10861 attaattcat caaacgaatg aattaagtgt catgtaaatt cacattctgt cctgaaaatt
    10921 cagttcgtca cagttaacca gttttagtgg attaactgag ttcatattac ggcatttgtc
    10981 tgtttctgtt gtcagcagtt caatccactg catcagtaaa gtatcaaaca gaaaaacgaa
    11041 gacagcgaaa acgacgagcc accaatactt gcgaatcatt acctgagcct gtgcatgttt
    11101 aaccaagtct ggcaggaaat atacacgaaa tgaataatct gaaaaccagg cttacacttc
    11161 ctttactttg caatgagatc ggggtcaact tcgcttaacc ggcttcgttt tgacaggttg
    11221 ccggtctttc tttttttcac tttcgccagt tcttccgcag agtaatgcga cgcgacatcc
    11281 agccgtcgaa gccccatttt gatgtactcg ctgttgatct caataccaat gaattttcgc
    11341 ccgctggaga cggctacggc accggtagta aagctaccgg caaacgggtc gagaatgata
    11401 tcgcctgggt tggaagaggc gagaataatg cgtttcagta aggcttccgg tttttgcgtc
    11461 gggtggttct catattcatc catcaaataa cgcacgcgcg gaaaatccca gacgttaccc
    11521 ggtacttttt gatgattgta tggctgtgga ggatttttgc gataatcgat caacgcgcgc
    11581 tgcgatccgg ttttggcttc taccagaata gcatcaccgt tgaatgtgta gttctttgcg
    11641 tctttcacca tcatcaggat ggggtcgtac atggagccgt agtgtttttt cgcctgtact
    11701 ccagaactgt catatgacca gacgatgcga cttttgatgg taaaaagctt gcggcactgg
    11761 agatcgataa agggcatgtt ttccgtgctg ttcatgatgt acatgctgcc ctgctttttc
    11821 agaacgcggt ggcactctgc aatcacttca aacagccagt cgataaacag atcttctttc
    11881 caggcttcga tcagaccatc aaaattttta ccgatgttat atggtgggtc ggcaaagatc
    11941 agatcgacac tttcggcggg gatcttttta agttcggcaa gcgcatcacc gtgaataatg
    12001 gtcttagctt cattaccaaa ccgggtcggt tcacatcctg ttctcatggt cactcccttt
    12061 gtgacaccta taaaaaaggc gcttccccat gccgagtagc gcctttttaa tcaagcattt
    12121 agctaacctg aattagttca tgccgtattt tttcaatttt ttacgcagcg taccacggtt
    12181 gatgcccatc atcagcgcag cacgggtctg gttaccacgg gtgtattgca tcaccatgtc
    12241 caacaggggc tgttctactt cagccagtac cagctcatag aggtcattca catcctgacc
    12301 attcagttga gcaaaatagt tcttcagtgc ctgtttaacc gagtcacgca ggggtttttg
    12361 ggttacctga tcctgagagt taacggtaga aacggtcagt acgtcagaat ttacgcgttg
    12421 ttcgaacata gttctgtcag ctctttattt ctgtttacgc aaaattttcg aagtatgcct
    12481 ccaacgcctc cagctgttcg ctggcatcct caatggcgtt gaatgtgcgc cgaaactggt
    12541 catttggagc gtgttcctgg agataccagg aaacgtgttt acgtgcaatt cggtaccctt
    12601 ttgccggacc ataaaagtca tgcagttccc gaacgtgcgc gcaaagcaag cgcttaacct
    12661 ctgccaaagg cagtgggggc agcaactccc cagtgtccag ataatgctgg atttcccgaa
    12721 agatccaggg tcttccctga gctgcgcggc ctatcatcag ggcatccgcc cctgtatagt
    12781 cgagcacagc tctggcttta agcgggtcag taatgtcgcc attcgcgata accggaatgg
    12841 aaactttctg cttaactgcc cgaatactgt cgtactcagc ttctccattg aacaaacagg
    12901 cgcgtgtacg gccatgaatg gtcagagcct gaatgccaca gtcttcagcc agttgggcaa
    12961 tctcttcgca gttacggtgt tccggtgccc agccagtgcg aatcttcagg gtaacaggaa
    13021 cgtccactgc attgacgacc tcggtaagga tcgatttaac gacatccggg tactgcaaga
    13081 gggctgaacc tgcgagcttg cgattcactt ttttagccgg gcaacccata ttgatatcaa
    13141 taatctgggc accgctttcc acgttaatac gtgctgcatc tgccatttct ttcggatcgc
    13201 taccagcaat ttgcacggtg cgaataccgg gttcatcaat gtgcaccatc cgtaaacgag
    13261 atttgtcgct ttcccaaacc tgtgggttag aagacatcat ctcggatact gtcaatccgg
    13321 ctcccatctc gtagcacaac gtccgaaaag gtctgtctgt aatgccagcc atgggcgctg
    13381 cgatcaggcg atttctgagc tgatattgtc cgatgcgcat gagttaagaa atgaccatac
    13441 tgtgactgca aggcggcgta tattacgcat tttttgcacg agatgaaagg ccaaactttg
    13501 accaatcctc tgagatggat caaagaattg catttaaaat gagcgtggtg cgataattac
    13561 tcataaaaat catcatatta gaaaatagtg actaaaattt acattcaaag aaatttgagt
    13621 aagttctcaa tttttcttta tgaatgaaaa ttttggcacg caaatttgcg taaataaccg
    13681 gcaaatttac gtgccttttg tgagcttgct cgcacttcgc cccgcgtcac cctacggcga
    13741 tgcgaaggtt aattcttacg accggtaata cggcaccact cttctttttc cacgaccggg
    13801 tccagtgcga agctatcggc ataagcttca caaacgctct ctgcctggct tgccagaata
    13861 ccggaaaggc ccagcaaacc gcctgaaacc ggcaggacgc tgattaacgg tgccagttca
    13921 cgtaatgggc ctgcaaggat gttcgcgacc accacgtcgg ctttcatttc ttctggctga
    13981 tctttcggta agtagagttc cagacggtca gaaacgccat tacgttcggc gttgtcgcgg
    14041 ctagcctgaa tcgcctgcgg atcgatatca ataccaatgg cttttgctgc acccagtttc
    14101 agcgccgcga tagccagaat gccggaaccg cagccaaagt cgatgactgt tttaccagtt
    14161 aaatcgaggc tgtcgagcca ttgtaggcac agagaggtag ttggatgggt acccgtacca
    14221 aacgccagcc ctgggtctaa catcacgttg acggcgtttt cgtccggcac atcacgccag
    14281 cttgggcaga tccacagtcg ttcaccaaag cgcatcgggt ggaaattatc catccattcg
    14341 cgctcccagt ctttatcttc cagttgttcg attttatgcg cgaagcctgc gccgagcagc
    14401 ggatggtttt ccagaatcgc caccacgtcg ttcatatcgg tttcagcgtc gaacagacca
    14461 atcacatcgg tgtcgcccca caggcgcgtt tcgcccggca gcggctcaaa tactggcgta
    14521 tcgtgggtat cctgaaaagt gatagaaacg gcacccgctt ccatcagcgc atcgctaaga
    14581 tcttcagcgt tcgcgccggt ggtgttcagt ttcagttgga tccaaggcat ggcaaaactc
    14641 tttatttatc agtagtcaaa acggtagctt gcgggacgga tgtaccgaaa cggtttccga
    14701 ccaggaaagc cagcaaactt agtagtaacg agggcacgat agggtggaag cccaggtact
    14761 gaatattcag cgtcgcgagt acggcataca gcacgccgcc aacgatcatc gcacttagcg
    14821 cgcctttggc gttggcgcgt tcccagtaaa gacccagcac cagcggccac aggaaaacgg
    14881 cttccaaccc accgaaggcc agcaaattca gccatatgat catttctggc ggcttccagg
    14941 cggcaagcag cagcaacgcg ccgagaacta acgtaattac cgccgacatc cgcttcagac
    15001 gcgtctcgtt ttgcatttga tccggacgga tattcagata gagatcttta atgatcgtag
    15061 cggaactttg tagcaattgg gcgttaattg tcgacatgat cgcagccata ggtgcagcca
    15121 gaaagatccc ggcagcaaac ggtggcagca cttttaccat taacgtcggg atcaccagat
    15181 ccggtacggt gagatcgggg atcactgcac gacctaacgc tccggccagg tgcataccga
    15241 acatcaggat tgcgactaca atcgtaccga tgatgatccc ccggtgtacc gctttgctgt
    15301 ctttataaga gatacagcgc accgcagtat gcggcaggcc aatcacgcca aagcacacca
    15361 gtacccagaa cgacgtcata aaggcaggcg acagaatatc gtcagcgcct tgtggcgtaa
    15421 ccagttgcgg atcgatggtt tgcagcgtct ctaccgcatt acttaaacca cctgcggcat
    15481 gtaccacgcc aataagcagc acaacggtgc caatcagcat cacaagccct tgcatggtgt
    15541 cgttcagcac gctggcgcga aagccgccaa aggcggtata caacgcaatg ctgataccga
    15601 aaatcagcag cccggtttca taaggaatac ccgccgcggt ttccagcagg cgcgcaccgc
    15661 cgataaactg cacggtcatt gccccaacga acgcaaccag caaactcaaa ctcgccagcc
    15721 acaccagaag acgactctgg tagcgggcaa acagcatgtc gttcagcgtc actgcattgt
    15781 agcggcgcgc aagaatcgcg aacttcttgc cgagaatacc gagcgaaagc cagactgcag
    15841 gaagctgaat catcgccagc aatacccaac ccaggccgta tttataagca gctccaggcc
    15901 cgccgataaa cgaacttgca ctgatatagg tcgcggtgag cgtcatcgcc agcacaatac
    15961 cgcccataga gcggctgccg aggaaatact cattaaggaa ggtaccggtg ctccgtttac
    16021 gcatcgcata aacagagata ccgaacacca ccaccagata ggcgaccagc ggtagaatca
    16081 cttcaagctg catcgtcatc ctccagtggg atatcgcgat agataaattt caccatcgcc
    16141 cagcacagtc caataaacag cagcggcgtc aggatgcagg ccatctcaaa ccagcgcgga
    16201 aagccggtaa aaccgggggc aacgtcaggt aagtaagcgg ctgctaacca aactgccaga
    16261 tacaaaaggg tcagccccag cgcccagcgc gcctctttat gggcctgaac aaaacgagtg
    16321 tccacggaag ggttcctcct catgggggga tacgagaaac gggcaattct acggcaactc
    16381 ttcaggcagg gaaaataatc tgacagaaaa ttgccgttca gtgctgctgc aaaaagtctt
    16441 caatgtcagc cagtgaggat atcccttcca tcggaccttg ccgcattacg gcgagcgcgc
    16501 cgctggcatt tgcatattgc agtgccttat gtgccgggaa accggataag aaaagagtga
    16561 taaacgttgc gccaaagcag tcgcctgcac ccgttggatc gataatttcg atatcgtggc
    16621 ctgtaacatg ctgggcgtgt aatgtaccgt ttttaagctt gtaatagctg gccccacgct
    16681 gggcgcgttt tatcgccaca tgttttacgc cgccgtggag aagatcgcta acaatctgtt
    16741 cttctgacag atttttgtga cgcgcgaaga aagggagttc gctttcgctg gggatgaaaa
    16801 tatccgtata ttcaatcaaa taatcgagag cctgcgccat ttcaggaatg ctcagcatct
    16861 ctttgcgaat attgggatcg aaagaaacgg tgccgccagc cgatttgatc gtcgttattg
    16921 ctttacgcat gacatcgatc atgcgaaatg agaacaatga tgagcccaca atatggagat
    16981 ggttacactg ttttagcaga tccttatcaa tgtgctcagc agtaaacaag ccgcaggcgc
    17041 tgttagggat attaaagacg aaatcgcgct gctggggatt ttgataactc acgaacgccg
    17101 tacctgtgac ggcattgttc ataacatgga tcccatcggt aatgacacct tcatgacgga
    17161 ggcgctctat aatgagtcgg ccaaaatcat cattaccaac acatccgaag aagatggccc
    17221 gatgggacag ttttgccacc tgagcagcaa aaattgctgg cgcaccgctg ggaaatggcc
    17281 cgataaactc cccaggctga gtgaattttt gatgtgggtt gcgggacaaa aactcggcca
    17341 gcaattcgcc catagcgcag atagttattg tcacaaaacc cctctcattc ctgaagcctt
    17401 tcgcgattgg accaggtaaa gcactcatta ctggtataaa ggataacgaa atcagccgac
    17461 tgcaattgtt gctgatattg ttcgttaatg ctgcggctga cgatcacatt ttctgcctga
    17521 tgcaaatgcc cgatagcagc cgttgatggc gcaggatcgg cggcaacgat aaccgtctta
    17581 ttctgggcat gatcgaaaca gagctgccag gcagcggcca gtctgggaac gttgatattt
    17641 aaagtaccat cagcatccag atggttgatt tccagaatgc tatgtgtaat ggtgaaatgc
    17701 tgaagtgcct gttcaagcgg ttttccggcc agtgcggtgt cggggcgcag catttcactg
    17761 ccagccagta ttatttcgcc atcaataaac tgatttgcca gcagcgcatg ttcgggatcg
    17821 ttggtgatca gacgcagttt tttcacttcg ctgagcaatg gaatgatctt acggcagatt
    17881 gtcccatgtc caagaaatag cgtgtcacga tcgcgaatta accgtgcgca atgtcgtgct
    17941 atttccattt gttgtgccag agacaatggc gcgatcggtt gtatcgcttc tggttcagag
    18001 gagagtggtg tcgcaatagc accgccaaat gatcgcttta aatatccctg ttgctccaga
    18061 taactgagat cgccgcggat cgtcacgcca gagacaccaa gttgcgcaga taagtcatca
    18121 actttgattt caccttgggt ggcaacaatt tctgcaattt ttaatctgcg tttcagtagg
    18181 ttagacgatt ttctcggcac gttaacactc ttcattggcc tttaatgcgt aacactatag
    18241 ccccttgtat ttttctttga aagttatcct tcaataatat cgacaattcg aaaagaaaat
    18301 catgggtcaa aaatcgcaat aaaaatagat taattcattg aaaaataaat gaatttattc
    18361 atatttatgc agagatgtta ttggtttcac ttgtaaagtg aaaaacaaat taagttattt
    18421 ttttgtaagt tattttgatg atattcgaca tgtatcacgc tttttgccgc ttttgctgtg
    18481 ctagtttgct ttcaaaatga aagtgaatat tctctttctt cattttgtaa ggcgaacgac
    18541 aaataacagg agctgcgatg tacatcattt caagcaaaaa catgctgaaa aaagcccagt
    18601 cagagggata tgccgtcccc gctttcaaca ttcataacct tgaaacttta caggtagttg
    18661 ttgagagcgc tgcacaactt cgctctcccg ttatgctggc gggaacaccc ggtacttatc
    18721 gttatggtgg cgtgggaagt ttaatttcgt tagtacaatc gctggctcgc gagtacaacc
    18781 tgccgttagt cctgcatctc gaccatcatg aagagagtga tgacattttt aacaaggttc
    18841 gcgcagggat ccgttctgtc atgattgatg gctcccattt gccatttgaa gacaacattg
    18901 cgcgagtgca agaagttacc accttttgcc atcgctttga tgttagcgtt gaggccgagc
    18961 tagggcgtct tggcggccag gaggacgatc tgctggtgga tgaaaaagat tccgcttata
    19021 cctcaccagc cgcagctgca gagtttgttc aacgtaccca aattgactcc ctggccgtag
    19081 caatcggcac agcacatggt ttatatgcgc atgaaccacg actggatttt gtgcggctgg
    19141 aacagattcg tcagcgagtg gagattccac tggtgttgca tggtgcttcg ggcttatcag
    19201 aacaggacgt tcagcactgt attcgccgcg gtatttgtaa agtgaatgtc gcgacagaat
    19261 tgaaaattgc gtttgccgat gcgttaaaag gatatttcta caacaatcct gcggcaaatg
    19321 atccacgcca ctatatgcag cccgcaaagg ccgccatgaa agaagtcgta actcgtatta
    19381 ttggtgtctg tggtagtgaa ggaaaaattt aagacgttgt accctacaaa aacaatgagg
    19441 attgtttatg aaaaatatta aattacttgg ttcagctatg ttggtgagcc tggcattgtt
    19501 ctcgcaaaat tcgttggcaa aagagtataa aattggtgcg tcattattaa cacagcaac
//
LOCUS       DAJVUK010000075        19403 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.075, whole genome shotgun sequence.
ACCESSION   DAJVUK010000075 DAJVUK010000000
VERSION     DAJVUK010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19403
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.075"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(33..1862)
                     /gene="glmS"
                     /locus_tag="OQQ57_002384"
     CDS             complement(33..1862)
                     /gene="glmS"
                     /locus_tag="OQQ57_002384"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HCS1957123.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIMVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(2024..3394)
                     /gene="glmU"
                     /locus_tag="OQQ57_002385"
     CDS             complement(2024..3394)
                     /gene="glmU"
                     /locus_tag="OQQ57_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HCS1957124.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILISNGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDVNLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(3745..4164)
                     /gene="atpC"
                     /locus_tag="OQQ57_002386"
     CDS             complement(3745..4164)
                     /gene="atpC"
                     /locus_tag="OQQ57_002386"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HCS1957125.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQSGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(4185..5567)
                     /gene="atpD"
                     /locus_tag="OQQ57_002387"
     CDS             complement(4185..5567)
                     /gene="atpD"
                     /locus_tag="OQQ57_002387"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HCS1957126.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(5594..6457)
                     /gene="atpG"
                     /locus_tag="OQQ57_002388"
     CDS             complement(5594..6457)
                     /gene="atpG"
                     /locus_tag="OQQ57_002388"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HCS1957127.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHLYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(6508..8049)
                     /gene="atpA"
                     /locus_tag="OQQ57_002389"
     CDS             complement(6508..8049)
                     /gene="atpA"
                     /locus_tag="OQQ57_002389"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HCS1957128.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(8062..8595)
                     /gene="atpH"
                     /locus_tag="OQQ57_002390"
     CDS             complement(8062..8595)
                     /gene="atpH"
                     /locus_tag="OQQ57_002390"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HCS1957129.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(8610..9080)
                     /gene="atpF"
                     /locus_tag="OQQ57_002391"
     CDS             complement(8610..9080)
                     /gene="atpF"
                     /locus_tag="OQQ57_002391"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HCS1957130.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(9142..9381)
                     /gene="atpE"
                     /locus_tag="OQQ57_002392"
     CDS             complement(9142..9381)
                     /gene="atpE"
                     /locus_tag="OQQ57_002392"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HCS1957131.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(9428..10243)
                     /gene="atpB"
                     /locus_tag="OQQ57_002393"
     CDS             complement(9428..10243)
                     /gene="atpB"
                     /locus_tag="OQQ57_002393"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HCS1957132.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(10252..10632)
                     /gene="atpI"
                     /locus_tag="OQQ57_002394"
     CDS             complement(10252..10632)
                     /gene="atpI"
                     /locus_tag="OQQ57_002394"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HCS1957133.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(11249..11872)
                     /gene="rsmG"
                     /locus_tag="OQQ57_002395"
     CDS             complement(11249..11872)
                     /gene="rsmG"
                     /locus_tag="OQQ57_002395"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HCS1957134.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI"
     gene            complement(11936..13825)
                     /gene="mnmG"
                     /locus_tag="OQQ57_002396"
     CDS             complement(11936..13825)
                     /gene="mnmG"
                     /locus_tag="OQQ57_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HCS1957135.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(14204..14647)
                     /gene="mioC"
                     /locus_tag="OQQ57_002397"
     CDS             complement(14204..14647)
                     /gene="mioC"
                     /locus_tag="OQQ57_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HCS1957136.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(14737..15195)
                     /gene="asnC"
                     /locus_tag="OQQ57_002398"
     CDS             complement(14737..15195)
                     /gene="asnC"
                     /locus_tag="OQQ57_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HCS1957137.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQHPIMRTIKP"
     gene            15347..16339
                     /gene="asnA"
                     /locus_tag="OQQ57_002399"
     CDS             15347..16339
                     /gene="asnA"
                     /locus_tag="OQQ57_002399"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HCS1957138.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVIHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYLDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(16344..17795)
                     /gene="viaA"
                     /locus_tag="OQQ57_002400"
     CDS             complement(16344..17795)
                     /gene="viaA"
                     /locus_tag="OQQ57_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HCS1957139.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWSEALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(17789..19285)
                     /gene="ravA"
                     /locus_tag="OQQ57_002401"
     CDS             complement(17789..19285)
                     /gene="ravA"
                     /locus_tag="OQQ57_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HCS1957140.1"
                     /translation="MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTS
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKE
                     IGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
                     LILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKT
                     ALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLS
                     KGGEIRGKLNGIGFAQKLNLEVDSTQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQL
                     EELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
BASE COUNT         4638 a         5124 c         4863 g         4778 t
ORIGIN      
        1 ggtcggcagc ccttttttat ctatgatagt gattactcaa ccgtaaccga ttttgccaag
       61 ttacgcggct ggtcaacgtc ggtgcctttg atcagcgcga catggtaagc cagcagctgc
      121 agcggaacgg tgtagaagat cggtgcaatc acctcttcca catgcggcat ctcgatgatg
      181 tgcatgttat cgctacttac aaaacccgca tcctgatcgg cgaagacata caactgaccg
      241 ccacgcgcgc gaacttcttc aatgttggat ttcagttttt ccaacagttc gttgttcggt
      301 gcaacgacga taaccggcat atccgcgtca atcagcgcca gcgggccgtg tttcagctcg
      361 ccagcagcgt aggcttcagc gtgaatgtag gagatctctt tcagcttcaa tgcgccttcc
      421 agtgcgattg ggtactgatc gccacggccc aggaacagtg cgtgatgttt gtcagagaaa
      481 tcttctgcca gagcttcaat gcgtttgtcc tgagatagca tctgctcaat acggctcggc
      541 agcgcctgca gaccatgcac aatgtcatgt tcaatggagg catccagacc tttcaggcga
      601 gacagcttcg ccaccagcat caacagcaca gttaactgag tggtgaatgc tttagtggac
      661 gccacgccga tttccgtacc cgcgttggtc atcagcgcca gatcggattc gcgcaccaga
      721 gaagaacccg gaacgttaca gattgccagc gaaccaaggt aacccagctc tttcgacaga
      781 cgcaggcccg ccagggtatc cgcggtttcg ccagactgtg acaaggtgat catcaggctg
      841 ttacgacgca cggcagattt acgatagcgg aattcagagg cgatttcgac gtcgcacgga
      901 atacctgcca gcgattcaaa ccagtagcgg gaaaccatac cggagttata agaagtacca
      961 caggcgagga tctgaatatg ctcaaccttc gacagcagtt cgtcggcgtt cggtcccagc
     1021 tcgcttaaat caacctgacc gtggctgatg cgcccagtaa gggtgttttt gatcgcgttc
     1081 ggctgttcgt agatctcttt ctgcatgtag tgacggtaaa tacctttatc gcccgcgtca
     1141 tattgcagat tggattcgat atcctgacgt tttacttccg cgccagtttt atcgaagatg
     1201 tttaccgaac ggcgagtaat ttccgcaata tcgccctctt caaggaagat aaagcgacgg
     1261 gtcaccggca gcagcgccag ctggtcagaa gcgataaagt tttcgcccat acccaggcca
     1321 atcaccagcg gactaccaga acgtgccgcc agcagggtat ccgggtgacg ggagtccatg
     1381 atcactgtac cgtacgcacc gcgcagctgc gggatagcac gcagaacagc ctcacgcaga
     1441 gtcccgcctt gttttagctc ccagttcacc agatgggcaa tcacttcggt gtcggtttca
     1501 gaaacgaagg tatagccacg cgcttttaac tcttcacgca gcggttcatg gttttcgatg
     1561 atgccgttat gcaccaccat aatgtgttca gaaacatgcg gatgcgcgtt agcttctgaa
     1621 ggttcaccgt gggtcgccca gcgagtgtga gcaataccgg tgccgccatg cagaggatgt
     1681 tcttccgctg cctgagccag catctggact ttaccgaggc gacgcaggcg ggtcatatga
     1741 ccttccgcat caacaacggc cagaccagca gagtcatatc cgcggtattc cagacgacgt
     1801 aaaccttcaa gaaggatttc tgctacatca cgttgcgcga tcgcgccaac aattccacac
     1861 atagtttttg attccgattt atatcgttgt cggtcaacct gtatgcccgt tttttcgggc
     1921 gccccgagcc ttgtagagag tggggttatt tttatagtta ctgcttgtgg gagggagatt
     1981 atgttatctc ctcatcccag atgaccggat tacccggcca gaattacttt ttctttaccg
     2041 gacgacgcca gccttctttc tgagtctgcg gcacacggct gatagctaat gcattttcgc
     2101 cgacattacg cgtcacagtt gtacccgcag caatggtcgc gcctttgcct actgttaccg
     2161 gggccaccag ctgagtgtcg gaaccgacaa acacatcgtc gccgataatg gtcttaaatt
     2221 tattcgcacc atcgtagttg caggtaatgg ttcccgcgcc gatgttaacg ttatcgccaa
     2281 tttccgcatc gcccaggtaa gtcagatgac cagctttcga gcctttaccc agacgcgctt
     2341 ttttcatctc aacaaagtta ccgacgtgtg caccttccag caactcagca ccaggacgca
     2401 gacgggcaaa cgggccaata gtacaggccg ctgccagatt cacgtcttcc acaacggtat
     2461 acggactgat ttcgcaatca tcgccaatca cgctgttttt aatcacgcaa ccggtgccga
     2521 ttttcacgcg atgaccgaga gtcacgttgc cctcgatgat aacgttagta tcaatttcaa
     2581 catcgcgccc gtgagtaagc gtaccgcgca gatcaaaacg cgccggatcg cgcagcataa
     2641 cgcctgctaa cagcagtttt tcagcctgtt cggactggta aacgcgctcc agacgggaga
     2701 gttgcaggcg gttattcaca ccttctactt cgcttaaacg ttgcggatga acggcgacga
     2761 tttcacgccc ttcctgatac gccagcgcaa taatgtcggt gatgtagtat tcgccctgag
     2821 cattattgtt ggtcagcttc gccagccagc gtttcatatc tgcgccgtta gagatcagaa
     2881 tgccggtgtt gatctcctga atctgacgct gctcgtcggt ggcatctttg tgctcaacaa
     2941 tgccggtaac tttgccattt tcacgggtga tacgtccata accggtcgga tcatccagtt
     3001 tcaccgtcag cagaccaatg ccaccctgcg gtttagcatc acgcaggcgc tggagtgttt
     3061 cgacagagat cagcggcacg tcgccgtaga gcattaaaat gtcttcatca tcggcaaaga
     3121 aaggtgcggc ctgctgcatt gcatgacccg tacccagctg ctctgcctga agcacccagt
     3181 taaggttgtc gtctttcagc gcctgtttaa gcagatcgcc gccgtgaccg tacaccaggt
     3241 gaacgtgcgc tgcgcctaat tcattcgcag catcaatgac atgctgaacc atcgctttcc
     3301 cggcaagggt atgcagcact ttcggaagat cggaatacat gcgcgtgcct ttgcctgcgg
     3361 caaggatcac tacgctcata gcattattca acatacgcgt cctgactgta atttgagaac
     3421 gaatttaaac cgcttcacct tgaaaaaact acattttttt catcgtgaaa tggacagagg
     3481 ataaattgtt caataacgga ttatccccgc tgacgaaagt gccattttcg accatcgtca
     3541 cgccttttgt ctgcagaaaa ttaaggcagt accttcattt aagcgtcagg tggatgtttt
     3601 tgctcttatt tcgatcaatg aataaacggg aaaacagggg tgttttatat cagcaggatc
     3661 tatgtgaacg ctcttcagga cggatcacgc gtaaaaaaaa accagcctgt ttccagactg
     3721 gcttttgtgc ttttcaagcc ggtgttacat cgcttttttg gtcaactcga taacgcgcag
     3781 ctgcgcgatc gctttggcca gttccgcaga cgcctgagcg taatctacgt cgccgtgaga
     3841 gctgctaatg tgctcttcag ccttacgttt cgcttccatg gctcgcgctt cgtcgagatc
     3901 ctggccgcga attgcggtgt cggccagaac ggtcacgttg ccagactgca cttcaagaat
     3961 gccgccagac agatagataa actcttcgtg accgtgctgt ttcacgatgc gaatcatacc
     4021 aggcttaatg gcggtgagca gcggtgcgtg gccagggtag atccccagtt caccttcgct
     4081 acccgttacc tggattttct cgaccagacc agagaacatt tgttgctctg cgctgacgac
     4141 gtccaggtgg taagtcattg ccatatcacc ctccgattaa ggcgttaaag ttttttggct
     4201 ttttccacag cttcttcgat ggaaccgacc atgtagaacg cctgctccgg caggtgatcg
     4261 tattcgcctt ccatgatgcc tttaaagcca cggatggtgt ctttcaggga gacgtattta
     4321 cccggagaac cggtgaatac ttctgccacg aagaacggct gggacaggaa gcgctggatc
     4381 ttacgagcac gcgctaccac cagtttgtct tcttcagaca gttcatccat acccaggatg
     4441 gcgatgatgt ctttcagttc ctgataacgt tgcaggatgg actgaacgcc acgcgcggtg
     4501 tcgtagtgtt cctgaccaac caccagcggg tccagctgac ggctggtgga gtccagcggg
     4561 tcaacggccg ggtagatacc cagagacgcg atctgacggc tcagtaccac ggttgcgtca
     4621 aggtgcgcaa aggtggttgc cggagacggg tcagtcaagt catccgcagg tacgtatacc
     4681 gcctgtacgg aggtgataga accagttttg gtggaggtga tacgttcctg cagaacgccc
     4741 atctcttccg ccagggtcgg ctgataacct accgctgaag gcatacggcc cagcagtgcg
     4801 gatacttccg taccggccag ggtgtaacga tagatgttgt caacgaacag cagaacgtca
     4861 cgaccttcgt cacggaattt ctcagccatg gtcagaccgg tcagagcaac gcgcagacgg
     4921 tttcccggcg gctcgttcat ctggccatac accagggata ctttgtcgat aacgttggag
     4981 tcggtcattt cgtggtagaa gtcgttaccc tcacgagtac gttcacctac gcccgcaaac
     5041 acagagtaac cggagtgctc gatcgcgatg ttacgaatga gctccatcat gtttacggtt
     5101 ttacctacac ccgcaccacc gaacagacca actttaccgc ccttagcgaa cggacacatc
     5161 aggtcgataa ctttgatacc ggtttccagc agttcctgag agtttgacag ctcttcgtag
     5221 gaaggtgctg cgcggtgaat cgcccaacgc tcttcttcac cgatctcgcc tttcatgtcg
     5281 accggttcac ccagtacgtt catgatacgg cccagagtcg ctttacctac cgggacttcg
     5341 atcgggtgtt cgaggtcttt tacatccaga ccgcgacgca gaccgtcgga ggaacccatt
     5401 gcgatggtac gcacgatacc gccgccgagc tgctgctgaa cttccagcac cagacgctca
     5461 ttaccatttt gcacctcaag agcatcgtac acgcgcggta cggcatcctg agggaattcg
     5521 acgtcaacta cggcgccgat tacctggaca atctttccag tagccatctt aaatcctcta
     5581 cgaaataacc tgtttaaacc gcggcggccc ccgagacgat ctcggtgagt tcctgagtaa
     5641 tgctggcctg acgagctttg ttgtatacca actgcagctc tttaatcagg ctgccgccat
     5701 tgtcggtcgc ggctttcatc gccaccatac gggcggcctg ctcgctggcc aggttttcaa
     5761 ccacgccctg ataaacctga gattcgacat aacgacgcag cagggtatcc agcaacgcct
     5821 tcggatcggg ttcgtacagg taatcccagg atttatgttt cagatcatca tcatctgatg
     5881 ccggtaacgg cagcagctgg ctgatggtcg gaacctgaga catggtgtta ataaatttgt
     5941 tgctgacaat gtaaagcttg tccagacggc cttcgtcgta ggcctgcaac atcactttta
     6001 ccggaccgat cagttcggac agggaagggt tatcccccat gccggtgacc tgggcaacaa
     6061 cattgccgcc cacggagttg aagaacgaca cgcctttcga gccgatcatt gcgaggtcgc
     6121 attgaacgcc tttgtcggtc caggtcttca tttccgccag cagttttttg aacaggttaa
     6181 tgttcaaacc accgcacaaa ccacggtcgg tcgacaccac caggtagccc acgcgtttaa
     6241 cgtcgcggtc ttccaggtaa aggtgcttat attccagatt accatgtgca aggtgaccaa
     6301 tcactttgcg catggtttct gcataaggac ggctggccgc catgcgatcc tgcgatttac
     6361 gcattttgga agcggcgacc atctccatcg ctttagtgat cttttgcgtg ttctggacgc
     6421 ttgcgatctt actacgtatc tcttttgcgc cggccatgag cttctcctca atgccttgcg
     6481 gcctgcccta aggcaagccg ccagacgtta ccaggattgg gttgctttga aggaatcgag
     6541 gatgcctttc agtttgcctt cgatttcgtc gttgtagcca ccggtctggt tgatctcttg
     6601 catcaacgga gcgtgatcac ggtcgacgta agccagcaga gcggcttcga agctgccaat
     6661 tttcgacagt tcaacatccg ccaggtaacc acgttctgct gcgaacagaa ccagagactg
     6721 ctgcgcaacg gacatcggcg catactgttt ctgtttcagc agttcggtca ctttctgacc
     6781 gtggtcaagc tgcttacgtg ttgcatcgtc aaggtcggat gcaaactgag agaacgctgc
     6841 cagttcacga tactgtgcca gagcggtacg gataccaccg gacagttttt tcatgatctt
     6901 ggtctgtgct gcaccaccaa cacgggatac ggaaataccc gggttaaccg caggacgaat
     6961 accggcgttg aacaggttgg tttccaggaa gatctgacca tcggtaatgg agattacgtt
     7021 ggtcggaacg aacgcagaaa cgtcacccgc ctgagtttcg ataatcggca gtgcggtcag
     7081 agaaccggtt ttccctttca cttcaccttt ggtgaaggct tcaacgtatt cggcgttaac
     7141 acgtgcagca cgctccagca gacgagagtg gaggtagaaa acgtcgcccg ggaatgcttc
     7201 acgtcctggc ggacgacgga gcagcaggga gatctgacgg taagcaacag cctgtttaga
     7261 caggtcatcg taaatgatca gcgcatcttc accgcggtca cggaagtatt cgcccattgc
     7321 gcaaccggca tacggtgcca ggtattgcag tgcagcggat tcagacgcgg ttgctaccac
     7381 aacgatggtg ttagccagtg cgccgtgctc ttccagttta cgtaccacgt tagaaatggt
     7441 ggacgctttc tggccgatag cgacatagat acatttgata ccggaatcgc gctggttgat
     7501 gatggcatcg atagccagtg cggttttacc tgtctgacgg tcaccgatga tcaattcacg
     7561 ctgaccacga ccgattggga tcatggagtc aacggcttta taaccggtct gtaccggctg
     7621 atctacggac tgacgttcga taacgcccgg agcgattgct tctacagcag agaagccgtc
     7681 gtgatccagc ggacctttac cgtcgattgg tgcacccaga gtgttaacca cacggcccag
     7741 caggccacgg ccaaccggaa cttccaggat acggccagta cacttaactt tcatgccttc
     7801 ggcaaggtca gcgtacggac ccataacaac cgcacctaca gagtcgcgct cgaggttcag
     7861 tgcgatagcg taacggttac ccggcaggga gatcatttca ccctgcatac aatcggccag
     7921 gccgtgaatg cggataacac cgtcacttac agaaacaata gtaccttcgt tgtgagcttc
     7981 actcacaaca ttgaactgag caatgcgctg cttgatcagt tcgctgattt cggtggaatt
     8041 cagttgcatg ctccagtccc cttaagactg caagacgtct gcaaggcgct caagacgacc
     8101 gcgtacgctg ccatcaatga ccatatcacc cgctcggatg ataacgcctg ccattacaga
     8161 cttatcgatt ttgcaattca gcttaacttt gcgtgacaga cgtttttcca tcgcagcaga
     8221 aattttcgcg agctgttgtt cactcagtgc ggcagcggaa atgacgtcta cctcagcggt
     8281 agcctcactc acggcacgaa ggtgaataaa ctgctccaga acatccggga gcgcgttaag
     8341 acgaccattt tcagccatta cccgaatcag gttctgaccg ttttcgtcca gttgctcacc
     8401 acaaactgcg ataaacgact cggcgagcgt ttctggcgca agcgcgccag agagaagctc
     8461 tgccatttgt tcgtttttgg ttacctcggc ggcaaacgcc agcatgtcct gccagcgttc
     8521 tacactttgg tgttcgacgg caaagtcaaa agctgctttg gcgtaggggc gagctaccgt
     8581 aataaattca gacatcagcc cctccctcct tacagttcag cgacaagttt atccacgatg
     8641 tcgctgttag cagcttcatc cacggaacgt tcgatgatct tctcggcgcc agcaacagcc
     8701 aggatagcaa cttgcttacg cagctcttca cgggcacgtt tacgctcggc ttcaatttct
     8761 gcctgcgcct gggccacgat tttagtacgt tcctgttctg cctcagcttt cgcttcgtcc
     8821 agaatctgcg agcggcgttt gttcgcctgc tcgatgatta cctgggcttc cgctttcgct
     8881 tttttcagct ggtcggtcgc gctggccttt gcaaggtcaa ggtccttatg tgctcgttct
     8941 gcggaagcaa ggccgtcagc aatttctttt tgacgttttt cgatggctgc cattaatggc
     9001 ggccatacgt acttcatgca gaacagaacg aacaggacaa acgcgatggc ctggccgagg
     9061 attgttgcgt taagattcac agcacaatgc ctctatttag ttaacgttct gatattgctc
     9121 tttaaataaa agcaacgctt actacgcgac agcgaacatc acgtacagac ccagacctac
     9181 agcgatcatc gggatagcat ccaccagacc cataacgata aagaactgag tacgcagcag
     9241 aggaatcaga tcaggttgac gcgctgcgcc ttccaagaat ttacccccga ggatgccgat
     9301 accgatcgca gcaccgattg ccgccagacc catcatcaca gcggcagcca tgtacagcag
     9361 atccatattc aggttttcca tgacagtctc cagtttgttt cagttaaaac gtagtagtgt
     9421 tggtaaatta atgttcttca gacgccatcg acagatagac gatcgtcaga accatgaaga
     9481 tgaaggcttg cagcgtaatg atcaggatgt ggaaaatggc ccacggcaca ttcaggatcc
     9541 actgtgacca ccacggcaac agaccagcaa tcagaatgaa aatcagctca ccggcataca
     9601 tgttaccgaa cagtcgcaaa ccgagtgaaa ctggtttgga cagcaggctt accccttcaa
     9661 ggattaagtt gacaggaatg aacgcccagt gattgaacgg ctgcagcgtc aactctttcg
     9721 tgaagccgcc gatgcctttc attttgatgc tgtagaacag aatcaggata aatacgccca
     9781 atgccataga cagcgttacg ttcacgtccg cagacggaac cacacgcagt gcaggcagac
     9841 ccagtacatg ttcagcaatg tacggcagca ggtcgatagg cagtaaatcc atcaggttca
     9901 tcaggaatac ccagacgaag atcgtcaggg ccagcggagc aatcagcttg cttttgccat
     9961 ggtacatgtc tttcacgcta ccattaacaa agccgatcac cagctcaatc gcggtctgaa
    10021 acttacctgg cacaccgctg gtcgcctttt tggctacgct acggaataaa accaggaaca
    10081 acagacccag caccaccgag aagaacatgg agtcaatatt gattgtccag aaggtggctg
    10141 gggggttttg tggatccacc agcgagaatg tacgcaggtc cagctgaagg ttattcaggt
    10201 ggtgtcctat gtaatcctgc ggcgtcatat tttctgaagc catgatgcct tttacccttt
    10261 gttgttaatt acagccggtg ccagtatctg aaccaccagc accaaaaccc acgtaacgat
    10321 cagcggcaag aataccgcct ttaaaaccgc caacgccacc accagtaaca ccaacatcgc
    10381 cagaactttg aaagcttcgc caaatgcgaa tgtccaggcc acccggcctt tcgctggtgt
    10441 atgcgcctgg tgacgccagg caaatatcat aaacaaaacg ttaggcagaa agactgccag
    10501 gcccccgctt attgcagaga cgccccagaa ggggtctttg aggctgaaca gcaatccact
    10561 tgctatcacc accagtaact gaacgagcag aagcttccga gcaacgtttc gactcacgag
    10621 cgacacagac atcacgtttt ttactcctgc tcccttcgag gtatgccgcg tgtcgtataa
    10681 aactttcttt aaggcttaga gtcaagcatc aaaaagcggt caaattatac ggcgcgcccc
    10741 cgtgatttca aacaataagt agccaaaagg tgaataaatg tttaaatatt tttccagtgc
    10801 atacaattgc gacttttcta ctaaccctgt tcgatcatga aaaactgtaa ataacgcgta
    10861 aacactggtg ataaagcgtg cttcagatca catattgcgc atgttcgcgc acagcatatt
    10921 tatttacttg gcaaatgatg cctttgcaag tttatgatat ttcagtctaa aaacagatac
    10981 tgttttaata aatgacattt acacaacaaa aaccacccat tgacattttt aataatgttt
    11041 tagcagccaa tgatggttct tagcgccgat ttttagcaga ctgatatttt cactaatgac
    11101 ttattttctg cttaccaaaa aaagccacgt tatcttgttg atgcaaaaga gtgaacgtgg
    11161 cgttaaatgt aaccagttat atcagtagaa aacctggttg ttgttaacag tctaaccggt
    11221 caatttttta tgattttttt gataaaaatt aaattttatt tgctttaatc accaccagat
    11281 gacgttcgcc atccagggct ggaacctgaa gtttaaccac tgattcgacc tgatattctt
    11341 cgggcaacaa agcgatttca tcttccggca tttgcccttt cagcgcgtag aaacggcctt
    11401 gctcaccagg aagatggtgg caccagctca ccatatcgtt cagagaggca aaagcgcggc
    11461 taattacgcc atcaaatggc ggctctgaag gaaactcttc taccctgctc tgtacaggtt
    11521 caatattctc cagtttaagc tcatgttgca cctgacgaag gaaacgcacg cgtttaccaa
    11581 ggctatccaa cagagtgaaa tgggcttcag gacgcacgat agagagtgga atgcctggca
    11641 gtcctggtcc ggtgccgaca tcgataaacc gttcaccttg cagatacggt gccaccacaa
    11701 tgctatcgag aatatggcgt accagcatct cattaggatc gcggaccgaa gtcaggttgt
    11761 acgctttgtt ccatttatgc agcatattca cgtaggcaat aagctggttt ttctggtgat
    11821 cggtaagcga aatacctgcg tctttcagca gtaaggagag tttgttgagc acggtgatta
    11881 cctgttcttg atgcgttgcc tggtaagcgg gtgcttacca ggcattttta atgcgttatg
    11941 cgctacgacg cagcataccc tgttttttca gccacaccag cagaatggag atagccgcag
    12001 gcgtgacgcc agaaatacgc gaagcttggc cgatagaggc tggtttgtga tcgttaagtt
    12061 tggcgatcac ttcgttagaa agaccggata cctggcggta atccagtgtc gcgggtagca
    12121 gggtgttctc gttacgcagc tgcttttcga tctcatcttg ctggcgcgcg atataacctt
    12181 cgtatttaac ctgaatctca acctgttccg ccgcctgttc gtctgtcaac gcaggggcaa
    12241 acggcgtcag cgtggttaat ttttcataag tcatttccgg acgacgcagc agatcttcac
    12301 cactggcttc acgggaaagc ggcgcagtca ggtgagcatt cacttcggct gcagcttccg
    12361 ccgacggggt tacccaggtc gatttcagac gctgacgctc acgctcgata ttctcaagtt
    12421 tctcgttaaa gcgcgcccaa cgttcgtcat ccaccaggcc cagttcacga ccgatttcag
    12481 tcaaacgcag atccgcatta tcttcgcgta gcatcagacg atattctgcg cgcgaagtaa
    12541 acatacgata cggttctttg gttcctaaag tgcacaggtc atcaactagt acgccgagat
    12601 acgcctgaga acgtgccgga gcccaacctt ctttgtcagc agacagacgg gcagcgttaa
    12661 gaccggccag caaaccttgc gcagcggctt cttcgtaacc ggtagtgccg ttaatctgac
    12721 cagcaaagaa cagcccctgg ataaacttgc tctccagcgt cggtttcagg tcgcgaggat
    12781 cgaagaagtc atactcaatg gcataacccg gacgcacgat cttcgcgttt tccatcccct
    12841 gcatagagcg gacgatttgc atctgcacat cgaacggcag gctggtggag ataccgttcg
    12901 gataaatttc attagaggtc agtccttccg gttcaaggaa gatctgatgc tgatttctgt
    12961 cggcgaagcg catgactttg tcttcgatcg acgggcagta gcgtgggccg acaccttcga
    13021 tcacccctgc atacattggg ctacgatcga ggttactgcg gatcacatca tgggttttct
    13081 cgttggtatg agtgatataa cacggcacct gctggggatg ctgggacgca ttgcccataa
    13141 acgagaatac cggcattggg ttatcgccat gctgttgcgc cagcacacta aagtcgatag
    13201 ttcgagcatc aatacgcggt ggtgtcccgg ttttcagacg accaacgcgc agcggcagtt
    13261 cacgcaaacg gcgagaaagc ggaatggacg gcggatcacc agcacggcca ccgctgtaat
    13321 tatccagacc gatatgaatt ttaccgtcga ggaacgtccc aacggtgagc acgacggctt
    13381 tggcacggaa cttcagtccc atttgggtaa cagcaccgac cacgcgatcg ttttcgacaa
    13441 taagatcttc aaccgcctgc tggaagatca tcaggttcgg ttggttctcc agcgccgtac
    13501 gtaccgcctg acggtagagc acacgatccg cctgagctcg ggtagcgcga accgccggtc
    13561 ctttgcttgc gtttagtatc ctaaactgga tacccgcttg atcgatcgct ttcgccatca
    13621 gaccgccgag tgcatccact tcttttacca gatgtccctt cccaataccg ccgatcgccg
    13681 ggttgcagct catctgcccc agagtgtcga tattgtgtgt caaaagcaga gtctgttgac
    13741 ccatacgcgc cgcggccatc gcggcctcgg tgcctgcatg acccccgcca atgatgatga
    13801 cgtcaaaagg atccggataa aacatggtga ttgcctcgca taacgcggta tgaaaatgga
    13861 ttgaagcccg ggccgtggat tctactcaac tttgtcggct tgagaaagac ctgggatcct
    13921 gggtattaaa aaggagatct atttatttag agatctgttc tattgtgatc tcttattagg
    13981 atcgcactgc cctgtggata acaaggatcc ggcttttaag atcaacaacc tggaaaggat
    14041 cattaactgt gaatgatcgg tgatcctgga ccgtataagc tgggatcaga atgaggggtt
    14101 atacacaact caaaaactga acaaccgttg ttccttggat aactaccggt tgaaccaagc
    14161 ttcctgacag agttatccac agtagaacgc acgatctgta tacttatttg agtaaattaa
    14221 tccacgatcc cagccattct tctgccggat cttccggaat gtcgtgatca agaatgttga
    14281 tcttcagtgt ttcgcctgtc tgttttgcac cggaattttt gagttctgcc tcgagtttat
    14341 cgatagcccc acaaaaggtg tcatattcac gactaccaat accgattgcg ccaaagcgga
    14401 ccgcagaaag atcgggcttc tgttcctgca atgcttcata gaaaggagaa aggttgtccg
    14461 gaatatctcc ggcaccgtgg gtggagctga taatcagcca gatccccgag gcagataaat
    14521 cttccaacag cggaccgtgc agcgtttcgg tggtaaaacc cgcctcttcc agcttttcag
    14581 ccaggtgttc tgctacatat tcggcaccgc cgagggtgct gccgctgata agagtgatat
    14641 ctgccataaa ccgccacctt tattaagagt ggcgtattgt acgctgtgaa cgcgttggga
    14701 tctacctgtg gaaaagtatg ggattaaaaa agccgatcag ggcttgatag tacgcatgat
    14761 cgggtgttgc aggacgatca atgtctcggt ggactgaatt tcatcaattg tttggatctt
    14821 gttgataagt acatgctgga gagcgtcgat cgaacggcac attactttta taaagatgct
    14881 gtagtggcct gttgtgtaat aggcttcagt gacttcatca aggctttcca gctttgccag
    14941 cgcggaaggg tagtctttgg cgctctttaa tataatgccg ataaagcagc ctacgtcata
    15001 accgagctgc ttcgggctga catcaatacg cgccccggta atgatccccg cctgcttcat
    15061 tttctctacc cgaacgtgaa tcgtccccgg actgacgcca aattgtttcg ccagttcggc
    15121 gtaagcggtg cgcgcattgc ccattaatgc ttccaggatg ccacggtcca gattgtcgat
    15181 cagataattt tccataggat tttcttatgc agattgatga ttcattctat tttagccttc
    15241 ttttttaatg aatcaaaagt gtgttaggct ttttattgaa tgattattgc atgtgtgtcg
    15301 gtttttgttg cttaatcata agcaacagga cgcaggagta taaaaaatga aaaccgctta
    15361 cattgccaaa caacgccaaa ttagcttcgt gaaatctcac ttttctcgtc aactggaaga
    15421 acgtctgggg ctgatcgaag tccaggcacc gattcttagc cgtgtggggg atggcacgca
    15481 ggataacttg tcgggctgtg aaaaagcggt gcaggtaaaa gtgaaagctc tgcctgatgc
    15541 ccagttcgaa gtgattcatt cactggcgaa gtggaaacgt cagaccttag ggcaacacga
    15601 cttcagcgcg ggcgaagggc tgtacacgca catgaaagcc cttcgccccg atgaagaccg
    15661 tctttctccg ttgcactcgg tctatgtaga ccagtgggac tgggaacgcg taatgggcga
    15721 cggtgagcgt caattctcga ctctgaaaag cacggtagag gcgatctggg cgggaattaa
    15781 agcaaccgaa gctgcggtta gcgaagagtt tggcctggca ccgttcctgc cggatcagat
    15841 ccacttcgta cacagccagg agttactgtc tcgttatctg gatctcgatg ccaaagggcg
    15901 tgagcgggcg atagcgaaag atcttggcgc ggtattcctt gtcgggattg gcggcaagct
    15961 gagcgatggt catcgccacg acgtgcgcgc accggattat gatgactgga gcaccccgtc
    16021 agagctgggt catgcgggtc tgaacggcga tattctggtg tggaaccctg tactggaaga
    16081 tgcgtttgag ctttcttcca tggggatccg cgtggatgcc gacacgctga agcatcagct
    16141 ggcgctgacc ggtgatgaag atcgtctgca gctggaatgg catcaggcgc tgctgcgcgg
    16201 tgaaatgccg cagaccatcg gcggcggtat cggccagtct cgtttgacta tgctgctgct
    16261 gcaactgccg catatcggcc aggttcagtg tggagtatgg ccagctgctg ttcgcgagag
    16321 cgtcccttct ctgctgtaat aatttatcgc cgccagcgtc tgagcaggcg gcttcgcatc
    16381 ccggtatcaa agcgccagat atgatcgaaa atgcgcatga tgccgggttt gccgtgtgcc
    16441 gacatcgcca cggcatgaaa gcgatgctga tgtacccgct gcagctcttt cactttactc
    16501 gtcacgtcgt caggcaaccg ctgagcgata aaatcagaaa tcaccaccgc atcggcatca
    16561 aaccattccc tgctttgcaa gcgttccata atggcgcgaa aacaactggc aagatcggtg
    16621 ccgccacgaa actgctggct taaaaaacgg attgcttgtt cgatgccttg tgggcctgaa
    16681 agctcataac ggacgatctc ggtggaaaat agcataatat agcagcgccg gttttctgcg
    16741 agagcaatgc gcatcaaggc caggcagaac gctttcgcac actgttcatt aaagccgccc
    16801 attgagccgg aagtatccac acagacaata aacggcccgc gcggctgttc atcgtaatct
    16861 ttatgtacca ccggacgttc gatcactttt tcacgccacg actcaccgtg caggcgatag
    16921 gtgagcaact gtttttccac cagccgacgg taaaactcat actccagttc cgttatccct
    16981 agtgtcgcca gttctggcgg caggagacgt aaaatatcat cgctttgttg cagaccatca
    17041 acctgctcag gaaccgtcgc cggttcgcgc accatggtgc ggaaggtttc catctgcgca
    17101 tcgttgcgcg gtattgattt ggcttcccga gaacgcccca gctgctctgc caggcgtttc
    17161 agttccggct gttcgttaag aaattcaccg tatttcacaa tcaactgata gtcgccacgt
    17221 ttaagctggc cggcgctcat atcccacaga cgaccagctg cggtattgtt atctgcgaga
    17281 atcggttcaa gttgtccgct cagcgtcatg cgttcctgaa cttcacttaa cagttgttcg
    17341 cgttcttctt ctaatagctg ttgatttaac gtcgttgctt gcacgatcag acttaaacgc
    17401 cagcgctgga gaaaaagcgt gtgtaacgct gaagttattg tgctgttagc atcaaccaac
    17461 tgccgggctt gttctgccca tggggaattc agacgatgca gtaagtccag gatctgtggt
    17521 agctgcacaa taaactgcgg cgtggagagg agctggcttt gctgatagca catcacctct
    17581 tcggtgagtt ctggcgggac tcgggcatct ttcagccgac tgcgcagcgc ctcactccag
    17641 cggggaacat catcagtgat tgctgccttc agtcgtggga atttttcaaa gaagaccgcc
    17701 agctgcggtg aggccagcag tgcgatgatc atctcttcga tcaatccctc ttcgctgacg
    17761 gccagcatca cattaagcgt atccagcgtt agcattgttg tgcctggcga atctgtgcac
    17821 cgacatcctg taggctggct tcaatgcgac ctaaccagtc gccagggata aacagacatt
    17881 tttgctgttc gctgaataaa gcgtgttgct tacgccagtc gctttcaagc tcttccagtt
    17941 gttgttttat ttcacctggc agaccttcag ccgatgaacc gggaagtgcc agcgtactgc
    18001 cttgtaaact tacatcgcgt acaacaagat gttgggtgct atcaacttcc agattcagtt
    18061 tctgggcaaa gccgataccg ttcagtttgc cgcgaatttc accaccttta ctcagccact
    18121 gttccagcgc gctacgctca aaggagatat gaaccacttc catatcatgc agttttaacg
    18181 gtttttgcag cagcagagtc agagtggaag cagtaacgtt aacagggagt tgatactgct
    18241 gacgacggct aaaaatgccg cccagacgaa ttaccgttaa ggctgtttta tcgctttgtt
    18301 gctgctgaag ttgcaggtga cgttgcacaa tcgcgcctag gcgggtcaac atcccttgct
    18361 gttgccaggc gtgaccggtc atcaatacat caatttgttg ttgtatcaaa ttcaggcttt
    18421 gcgcgtcata ccacaggcaa tctttcagca aaatgagatc taccggggca acagcactgc
    18481 gaccgctaaa aaaggcgctg gcctgcaata atcggatcgc ttttttccag cgacgatccg
    18541 agacataagg cgcatccggt aatttatcca gttgctggcg cagcataaaa atcagctcaa
    18601 atacatgatc gggcagcgta atttcaccaa tctctttctg ccagcgttca tattcttcat
    18661 ctgtgacctg caaggcatca ggaaccggat tgtcgttttc atcctgttga ctggtcagca
    18721 tggagcggaa attcgcttta tcctgcactt tatctaacca cagacgaatc agcatgcggt
    18781 catataacgc ttccagactg ctgtctgctt ccggcagctc gttggaggcc gccaccagca
    18841 gacgcatcgg gattttttct acgtgtgcac cgttgcggaa ctggcgctcg ttaatggcgg
    18901 tgagcaaggt attaagaatt gccgggcccg ctttccagat ctcatccaga aagacaattt
    18961 ctgcttccgg caggtaaccg ctggttaaac gttcatagcg cccttcatct tttagcgcct
    19021 gaatagaaag gggaccaaaa acttcttccg gcgtggagaa gcgggtcatc agatattcaa
    19081 acgcgcgggc attctgaaag gcgaatttta agcgccgggc gatcaaactt ttggcaatac
    19141 ctggcgggcc aaggaggaac acactttcac cacttaatgc cgctaataaa cacaagcgga
    19201 tggcgtggct acgttcataa agcccctttt ccaacgaact gctcaggcgg gaaattcttt
    19261 ccgctaataa atgagggtga gccataatga agtggcgtcc tttcgtcaaa agttctgcgt
    19321 aaattgcgag tatagacgtt tcttgctggt ggctaaaata gtctcaaagg ggggtaatgc
    19381 cagtcagtta agcaactgac tgg
//
LOCUS       DAJVUK010000076        19316 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.076, whole genome shotgun sequence.
ACCESSION   DAJVUK010000076 DAJVUK010000000
VERSION     DAJVUK010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19316
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.076"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..733
                     /gene="rihB"
                     /locus_tag="OQQ57_002402"
     CDS             <1..733
                     /gene="rihB"
                     /locus_tag="OQQ57_002402"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HCS1957141.1"
                     /translation="IMRKQIVADNIHGETGLDGPVFESLTRQAESTHAVKYIIDTLMA
                     SDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPE
                     AARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFEN
                     YGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTK
                     VGITIDTDWFWGLVEECVRGYIKTH"
     gene            833..2083
                     /locus_tag="OQQ57_002403"
     CDS             833..2083
                     /locus_tag="OQQ57_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HCS1957142.1"
                     /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPAGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDHLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA
                     YLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRVPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(2139..3227)
                     /locus_tag="OQQ57_002404"
     CDS             complement(2139..3227)
                     /locus_tag="OQQ57_002404"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1957143.1"
                     /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
                     GRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQAASHPGTIHCSAGGVGRNIAHN
                     LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT
                     VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
                     VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
                     LPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFLEGYSFRDSARFAVA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(3230..4087)
                     /gene="nfo"
                     /locus_tag="OQQ57_002405"
     CDS             complement(3230..4087)
                     /gene="nfo"
                     /locus_tag="OQQ57_002405"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HCS1957144.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK
                     AQQTEKAVA"
     gene            complement(4161..5210)
                     /locus_tag="OQQ57_002406"
     CDS             complement(4161..5210)
                     /locus_tag="OQQ57_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HCS1957145.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSVIA"
     gene            5310..6191
                     /locus_tag="OQQ57_002407"
     CDS             5310..6191
                     /locus_tag="OQQ57_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1957146.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
                     ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
                     DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
                     NALRRFLDYCDPANIPR"
     gene            6396..7865
                     /gene="lysP"
                     /locus_tag="OQQ57_002408"
     CDS             6396..7865
                     /gene="lysP"
                     /locus_tag="OQQ57_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HCS1957147.1"
                     /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            8158..10138
                     /gene="cirA"
                     /locus_tag="OQQ57_002409"
                     /pseudo
     CDS             8158..10138
                     /gene="cirA"
                     /locus_tag="OQQ57_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416660.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
     gene            complement(10170..11006)
                     /gene="yeiG"
                     /locus_tag="OQQ57_002410"
     CDS             complement(10170..11006)
                     /gene="yeiG"
                     /locus_tag="OQQ57_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HCS1957148.1"
                     /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            11264..11932
                     /gene="folE"
                     /locus_tag="OQQ57_002411"
     CDS             11264..11932
                     /gene="folE"
                     /locus_tag="OQQ57_002411"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HCS1957149.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            11949..13106
                     /locus_tag="OQQ57_002412"
     CDS             11949..13106
                     /locus_tag="OQQ57_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HCS1957150.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNRAWYGAITP
                     QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRA
                     WTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS
                     GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF
                     QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTMLFYHLGLFMHFDR
                     LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGTAISKTSR"
     gene            13248..14288
                     /gene="galS"
                     /locus_tag="OQQ57_002413"
     CDS             13248..14288
                     /gene="galS"
                     /locus_tag="OQQ57_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
                     /protein_id="HCS1957151.1"
                     /translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD
                     YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
                     KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN
                     LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGT
                     PDMPGGEAAMVELLGRNLQLTAIFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
                     IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN
                     AAAITNSTNQAM"
     gene            14568..15566
                     /gene="mglB"
                     /locus_tag="OQQ57_002414"
     CDS             14568..15566
                     /gene="mglB"
                     /locus_tag="OQQ57_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HCS1957152.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQSVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            15627..17147
                     /gene="mglA"
                     /locus_tag="OQQ57_002415"
     CDS             15627..17147
                     /gene="mglA"
                     /locus_tag="OQQ57_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HCS1957153.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLRRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
                     VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
                     PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE
                     AINHGFALVTEELRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDKSRMKSDTQWVIDS
                     MRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
                     ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            17163..18173
                     /gene="mglC"
                     /locus_tag="OQQ57_002416"
     CDS             17163..18173
                     /gene="mglC"
                     /locus_tag="OQQ57_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HCS1957154.1"
                     /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(18416..19316)
                     /gene="preA"
                     /locus_tag="OQQ57_002417"
                     /pseudo
     CDS             complement(18416..19316)
                     /gene="preA"
                     /locus_tag="OQQ57_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
BASE COUNT         4602 a         4775 c         5121 g         4818 t
ORIGIN      
        1 cattatgcgt aaacaaatcg ttgccgataa tattcacggt gaaaccggac tggatggtcc
       61 ggtattcgag tcgctgaccc gccaggcaga aagtacccac gcggtgaaat acatcattga
      121 taccctgatg gcaagcgatg gcgatatcac tctggtgccg gttggtccgc tttcaaatat
      181 cgcggtggca atgcgtatgc aacccgcgat cctgcccaaa atccgtgaaa ttgtgctaat
      241 gggcggcgct tacggtacag gcaacttcac gccatctgcc gagttcaaca tctttgctga
      301 tccggaagca gcccgcgtgg tgttcacctc cggcgttcca ttagtgatga tgggcctcga
      361 tctcaccaac cagactgttt gcaccccgga cgtgattgca cggatggaaa gggcaggcgg
      421 ccctgccgga gagctgttca gcgacatcat gaacttcact ctcaaaacgc agttcgaaaa
      481 ctacggcctg gctggcggcc cggtgcacga cgccacctgc atcggttatc tgattaaccc
      541 tgatggcatt aaaacccagg agatgtacgt cgaagtggac gtcaacagtg gcccttgcta
      601 tgggcgtacc gtctgcgacg agctgggcgt tcttggcaag cccgctaata ccaaagtcgg
      661 catcactatt gataccgact ggttctgggg cttagtcgaa gagtgcgtgc gcggctacat
      721 caaaacccat taagtgttga taacaagccg ggtcagtatc gcaagatcca agcccggcta
      781 tttctgatgg gcagaaagcc gtcgcccaat atgacatgaa gagataataa ctatggatgt
      841 catgagaagt gttctgggaa tggtggtatt gctgacgatt gcgtttttgc tgtcagtaaa
      901 caagaagaag atcagcctgc gtaccgttgg cgcggcgtta gtgttacagg tcgtgattgg
      961 cgggattatg ctttggttac cggcagggcg ttgggtcgct gaaaaagtcg cttttggcgt
     1021 gcataaagtg atggcgtaca gcgacgcggg tagcgcattt atcttcggtt cgctggtcgg
     1081 gccgaaaatg gacacgctgt ttgatggcgc aggatttatc tttggtttca gggtattacc
     1141 ggcaattatc ttcgtcactg cactggtgag tattctctac tacatcggtg tgatggggat
     1201 tttaattcgc attctcggcg gtatattcca gaaagcatta aatatcagca agattgagtc
     1261 attcgtcgcg gtcaccacca ttttcctcgg gcaaaacgaa attccggcga tcgtcaaacc
     1321 ctttatcgat catctgaatc gcaatgaatt atttacagcg atttgtagtg gcatggcctc
     1381 gattgctggt tcgacaatga ttggttacgc cgccctgggc gtacctgtgg aatatttgct
     1441 ggcggcatcg ttaatggcga tcccaggcgg gatcttgttt gctcgcctgt taagcccggc
     1501 tacggaatct tcgcaggttt cctttaataa cctctctttc accgaaacac cgccaaaaag
     1561 cattattgaa gccgctgcga caggggcaat gaccgggctg aaaatcgccg ccggtgtagc
     1621 gacagttgtt atggcatttg tcgccatcat tgcgttaatt aatggtatta tcggcggcgt
     1681 tggcggctgg tttggttttg cacatgcctc gctggagtcc attttaggtt acctgttggc
     1741 cccattggcg tgggtgatgg gggttgactg gagtgatgca aatcttgccg ggagtttgat
     1801 tgggcagaag ctggcgatca atgaatttgt cgcttatctc aatttctcgc catatctgca
     1861 aacgggtggc actctggatg ctaaaaccgt ggcgattatt tctttcgcgt tgtgcggttt
     1921 cgctaacttt ggttctatcg gggtggtggt gggggcgttt tctgcggttg cgccacaccg
     1981 tgtgccggaa atcgcccaac ttggtttacg cgcgctggcg gcggcgacac tttctaacct
     2041 gatgagtgct actattgcag gattctttat tggtttagcg tagtgcgcaa tttatgagcc
     2101 ggataagatg cggtcaagcg tcgaatccgg caacattgtt acaccattgg cactaatgaa
     2161 agcgcgttat cggcagacag ggtagggttg tttaagctgc cgctggcgcg cgaaattgcc
     2221 gcgcaggcta ccgcaaaacg ggcgctgtcg cggaaactgt atccttcaag aaagctatat
     2281 accaggcccg ccataaaacc atcgccagca ccaaaactgt ctactgtcgt atgcgctggc
     2341 gcggtcagca aaaattgttc tccatccttt tcgctgcaat aaactgactc atcgggcaaa
     2401 taaacaaaca gttgctgaac accttgctga tgcaatgcat tcactgcggc attacggtca
     2461 gcatcgctgg tgatcgcctg tccccataaa atttccagct ccggtaaagt gggtttcagg
     2521 gtgtgaatat gcgccagcca gtgtttgatt ttgcccgctt tgaattctga aacggtatcg
     2581 acaaacaccg ggatttcatc agcgagggta aagacccatt ccagcgcctc ggctgtcagg
     2641 ttgcaatcag ccagtaccac gcccgcatga cgaagtaaat cgcgcgaccc gttcagtagt
     2701 tgcggtgtca actgttccag cagatgggta tcgttaatcg ccagcacggt ttgatcgtct
     2761 cgattggcaa ttgccagata cgtcgatgtg ctttgaccat gcaaacgaac gcagccggag
     2821 acattcacgc cggcacggcg cgtttcttcc aggagcattt cgccataaaa gtcatcgcca
     2881 atcactgaaa gcaaatggac gtcacggcct aacagcgcca gattgtgggc gatgttgcgt
     2941 cccacgccgc ccgccgagca atgaattgta ccgggatgag aagccgcttg cgggtaacgg
     3001 atatccgcga tcccgcgaat atccatattg attgtcccca ccactacgca gtattcctgc
     3061 tcggtgagaa tgtaaccttt gcctttaatc cgccctttgc gcattaaatc cataatatgc
     3121 gccgcaacgc gcgaacgact gatttgcagc atgtccgcaa tttcgttctg ctgaatcagc
     3181 gggttacgcc gtaaaattgc aaggatctcc ttttcccggt tattcatctt caggctaccg
     3241 ctttttcagt ttgttgcgct ttcagccagg cgatctcttc tgcccagata tccgggttga
     3301 tggtttcaag gatcagcgga atgccgtcga aacggtcgtc ctgcatgatc cagcggaacg
     3361 catcatgacc gatattgcct tcaccgaggc tatgatggcg gtcaacgcgg ctgccaaagg
     3421 tgcttttcgc atcgttaagg tgcatcccgc gcagatactt aaagccaaca atacgggcaa
     3481 aatccgcgaa cgttttctcg cattcggctg gagtacgcaa atcatacccg gcagcgaaag
     3541 catggcaggt atcaatgcag acgccgacac gggatttatc ttccacgccg tcgataatcg
     3601 ccgcgagatg ttcgaattta aaccctaagt tactgccctg accggcggtg ttttcaatca
     3661 ccgctgttac accttgagtt ttatccagcg caatgttgat ggattcggca atacgcgcaa
     3721 ggcaatcctc ttctgaaatc tgcatcagat ggctgccagg gtggaagttg agcaaagaaa
     3781 gccccagttg ttcgcaacgc tgcatttcat ctataaaggc atcgcgcgat ttttccagag
     3841 cttcagtgac cggatgtccg aggttaatca gatagctgtc gtggggaaga atttgcgccg
     3901 atgtgtagtg atatttttca caggctgctt tgaattcatc gatggtttgc gtcgtgagcg
     3961 gtgcggcacg ccactgacgt tggtttttgg tgaacaaggc aaacgcggtt gcgtcgattt
     4021 cggcggcgcg aattgcggca tttgccagac cgccagcagc actaacgtgc gctccaatgt
     4081 atttcatgcg aggactcctg ttaaacccgc tggaggaaaa cggtaatgat agcgggttaa
     4141 caggagcaag atgtagtggt ttatgcgatg acgctttgaa tcacatagtt aatcgcacca
     4201 ccaccaacaa tcagccaggc aaacagtacc agtgccatca gcagaggttt cgccccggct
     4261 tttttcagcg cgctgacgtg agtggtcaga cccagcgccg ccatcgccat tgccagcagg
     4321 aaggtatcca gcgttaccag catgttcacc acgctctgcg gtaacaggtg gaacgagtta
     4381 aagatggcaa cgacgatgaa caagatggca aaccacggaa tagtgatttt gcttttctcg
     4441 ccgctgttcg ccccagacag ctgtttaaca cgcgccgcca gcaggatgag gaacggagcc
     4501 agcatcatca cgcgcagcat tttggaaata actgctgcgt tttccgcatc cgggctgatg
     4561 gcatgacctg ccgccaccac ctgcgccact tcgtgcacag tagaaccaat gtagataccg
     4621 aaagtttccg gactaaacca ttgagacatc agcggatata tcgccgggta gaggaaaatc
     4681 gcgacggtcc cgaagataac aacggttgca acagccacgg ttactttact ggcttccgct
     4741 ttcactaccg gctcagtcgc cagtaccgcg gcagcaccac agatactgct accggcaccg
     4801 atcaaccagc tggtgtgctt atccagacca aacactttct gccccaggaa gcaagccagc
     4861 aggaaggtac tggacagcgt caacacgtca atgatgatcc cactgatacc gacatcggca
     4921 atttgcgaga acgtcagacg gaagccataa agaatgatac ccagacgtaa taaatattgc
     4981 ttggcaaaca gcacaccacc gtcacagctt ttccagatgt gcggatagat ggtgttgcct
     5041 aaaaccatcc ccaacaagat tgcgagggtg agggcactaa acccggcacc cgcaaccgcg
     5101 ggaatggaac caccccacag ggcgaccccg gtgataactg cactcagggc taaccccgga
     5161 ataaaatgcc acagtgtacg atgttgtttc tgtaaggtga tattcgtcat aaccctctcc
     5221 ttataaccgg gcataaggtt acgactaact ggtttaaaaa taaaattgat tatatattta
     5281 taattaatct ttataagtgg taagcgacta tgcacatcac cctccggcag ttggaagttt
     5341 ttgcagaagt attgaaaagt ggatcaacca cccaggcgtc ggtgatgctg gcgttgtcgc
     5401 aatcagcagt gagcgcagcc ttgaccgacc tggaagggca gcttggcgtg caactgtttg
     5461 atcgcgtggg gaaaagactg gttgttaatg aacacgggcg gctgctctat ccgcgtgcgt
     5521 tggcattgct tgaacaggcg gttgaaatcg aacaactgtt tcgcgaagac aacggcgcga
     5581 ttcgtatcta tgccagtagt accatcggta actacattct gcctgcagtt atcgcccgtt
     5641 atcgccatga ttatccgcag ttgccgattg aacttagcgt tgggaacagc caggacgtga
     5701 tgcaagcggt gctggatttc cgcgttgata ttggctttat tgaaggaccg tgccacagca
     5761 ctgaaatcat ttctgaaccg tggctggaag acgagctggt ggttttcgcc gcgccgactt
     5821 cgccgttggc tcgtggtccg gtcaccttag aacagctggc cgctgcgccg tggatcctgc
     5881 gtgaacgcgg ttccggcacg cgggagattg tcgattatct attgctgtca catttaccga
     5941 agtttgagat ggcgatggaa ttaggtaact ccgaggcaat caaacatgcg gtgcgtcatg
     6001 ggttgggaat tagttgcctg tcgcgacggg tgattgaaga tcaattgcag gcaggcacat
     6061 taagtgaagt tgcggtccct ctgccgcgcc tgatgcgtac gttgtggcgt atacatcatc
     6121 ggcaaaaaca cctttccaac gcgctacggc gctttctgga ctattgcgat cccgcgaata
     6181 taccgcgtta agttgctgta caagaacatg ctggtgctgt gtcgatttcg tgacgcagcg
     6241 ccctcagcat gcattcgcca gaaaagagat tggctgcttt acttataatc ccagggcgat
     6301 catgaaggtg tcttataacc gtgtatttct gccggaagga ttgccaatcg tctgctacaa
     6361 tcgcgcctca tttttaagat ggatagcatt tttgtatggt ttccgaaact aaaaccacag
     6421 aagcgccggg cttacgccgt gaattaaagg cgcgtcacct gacgatgatt gccattggcg
     6481 gttccatcgg tacaggtctt tttgttgcct ctggcgcaac gatttctcag gcaggtccgg
     6541 gcggggcatt gctctcgtat atgctgattg gcctgatggt ttacttcctg atgaccagtc
     6601 tcggtgaact ggctgcatat atgccggttt ccggttcgtt tgccacttac ggtcagaact
     6661 atgttgaaga aggctttggc ttcgcgctgg gctggaacta ctggtacaac tgggcggtga
     6721 ctatcgccgt tgacctggtt gcagctcagc tggtcatgag ctggtggttc ccggatacac
     6781 cgggctggat ctggagtgcg ttgttcctcg gcgttatctt cctgctgaac tacatctcag
     6841 ttcgtggctt tggtgaagcg gaatactggt tctcactgat caaagtcacg acagttattg
     6901 tctttatcat cgttggcgtg ctgatgatta tcggtatctt caaaggcgcg cagcctgcgg
     6961 gctggagcaa ctggacaatc ggcgaagcgc cgtttgctgg tggttttgcg gcgatgatcg
     7021 gcgtagctat gattgtcggc ttctctttcc agggaaccga gctgatcggt attgctgcag
     7081 gcgagtccga agatccggcg aaaaacattc cacgcgcggt acgtcaggtg ttctggcgaa
     7141 tcctgttgtt ctatgtgttc gcgatcctga ttatcagcct gattattccg tacaccgatc
     7201 cgagcctgct gcgtaacgat gttaaagaca tcagcgttag tccgttcacc ctggtgttcc
     7261 agcacgcggg tctgctctct gcggcggcgg tgatgaacgc agttattctg acggcggtgc
     7321 tgtcagccgg taactccggt atgtatgcgt ctactcgtat gctgtacacc ctggcgtgtg
     7381 acggtaaagc gccgcgcatt ttcgctaaac tgtcgcgtgg tggcgtgccg cgtaatgcgc
     7441 tgtatgcgac gacggtgatt gccggtctgt gcttcctgac ctccatgttt ggcaaccaga
     7501 cggtatacct gtggctgctg aacacctccg ggatgacggg ttttatcgcc tggctgggga
     7561 ttgccattag ccactatcgc ttccgtcgcg gttacgtatt gcagggacac gacattaacg
     7621 atctgccgta ccgttcaggt ttcttcccac tggggccgat cttcgcattc attctgtgtc
     7681 tgattatcac tttgggccag aactacgaag cgttcctgaa agataccatt gactggggcg
     7741 gcgtagcggc aacgtatatt ggtatcccgc tgttcctgat tatttggttc ggctacaagc
     7801 tgattaaagg aactcacttc gtacgctaca gcgaaatgaa gttcccgcag aacgataaga
     7861 aataagtttc ctcccttcct tgctaagccc tctcaaccga gagggctttt tcaattccat
     7921 ttccctgaca aatcatgcgg atataaaatt taacatttgg attgataatt gttatcgttt
     7981 gcattatcgt tacgccgcaa tcaaaaaagg ctgacaaatc agaggctgtt ccggctttct
     8041 gggatgatca cctgcataca aataagtcca ccgcgatgct gccgtacgca aggggacgtg
     8101 aagaaggtgt gagcgataac ccattttatt ttcgtagtta cctcatggag atatggaatg
     8161 tttaggttga accctttcgt acgggtcagg ctgtgtttgt ccgctatttc ttgtgcatgg
     8221 cctgtgttag cggtcgatga tgatggcgaa acgatggttg tcactgcatc ttccgttgaa
     8281 caaaacctca aagatgcacc cgccagtatc agcgtcatta cccaggaaga cctgcagcga
     8341 aaaccggtac agaatctgaa ggatgtcctc aaagaagtgc ctggcgtaca actgacgaac
     8401 gaaggggata accgtaaggg cgttagtatt cgtggtctgg acagcagcta caccctgatt
     8461 ctcgtcgacg gtaaacgcgt taactcccgc aatgccgtct tccgccacaa tgatttcgat
     8521 ctgaactgga tcccggtcga ttccatcgaa cgtattgaag tggttcgtgg cccgatgtcg
     8581 tcgctatacg gctccgatgc gctcggcggt gtagtgaata tcatcaccaa aaaaatcggt
     8641 cagaaatggt cgggtaccgt taccgtcgat accaccattc aggaacatcg cgatcgcggt
     8701 gatacctata acggtcagtt ctttaccagt ggaccattaa ttgatggtgt gctgggaatg
     8761 aaagcttacg gcagcctggc aaaacgtgaa aaggatgacc cgcaaaactc aacgaccacc
     8821 gataccggag aaatgccgcg tattgaagga ttctccagcc gcgacggcaa tgtcgaattt
     8881 gcctggacac cgaatcaaaa tcacgatttt actgccggat acggtttcga ccgtcaggaa
     8941 ctcgctggac aaaaaccgcc tggaacgcca gaactactcc gtcagccata atgggcgttg
     9001 ggattacggc accagcgaac tgaaatacta cggtgagaaa gtcgagaaca aaaaccctgg
     9061 caacagcagc ccgataactt ccgaaagcaa tacggtcgac ggcaaataca cgttgccgct
     9121 gacggcgatt aatcagtttc tcacggttgg cggtgaatgg cgtcacgaca aacttagcga
     9181 tgcggtgaac ctgaccgggg gaaccagctc caaaacgtct gccagccagt acgcgctgtt
     9241 tgtggaagat gaatggcgga tcttcgagcc gctggcgctg acgaccggcg tgcgtatgga
     9301 cgatcacgaa acctacggtg aacactggag tccgcgtgcc tacctggttt ataacgccac
     9361 cgacaccgta acggtgaaag ggggctgggc gacggcattt aaagcacctt ctctgttgca
     9421 acttagccct gactggacga gcaattcctg ccgtggcgca tgtaagattg tgggtagccc
     9481 ggatctgaaa ccagaaacca gcgaaagttg ggagctgggg ctttactaca tgggtgaaga
     9541 aggctggctg gaagggggtg aatccagcgt taccgttttc cgtaacgatg tgaaagatcg
     9601 tatcagcatc agccgtacgt ctgacgtcaa cgctgcaccg ggctaccaaa actttgttgg
     9661 ttttgagacg ggcgctaacg gacggcgcat accggtattt agctactaca acgttaacaa
     9721 agctcgtatt cagggcgtgg aaaccgaact gaaaattccg ttcaacgatg aatggaaact
     9781 gtcgatcaac tacacctaca acgatggtcg tgatgtcagc aacggcgaaa acaaaccgct
     9841 atccgatctg ccgttccata ctgctaacgg tacgctggac tggaaaccgc tggcgctgga
     9901 agactggtca ttctatgttt ctggtcacta taccgggcag aaacgcgccg acagcgcgac
     9961 ggctaaaaca ccgggcggtt ataccatctg gaataccggc gcggcctggc aggtgactaa
    10021 agacgtcaaa ctgcgcgcag gcgtgctgaa ccttggcgac aaggatctca gtcgtgacga
    10081 ctacagctat aacgaagacg gacgtcgtta ctttatggca gtggattatc gcttctgatg
    10141 agaagatgcc cggcgaaccg ggcggacttt cacttcagta aatactgcgc atggaagcgc
    10201 aggtgatcct ctataaaaga ggcgatgaag tagtaactgt gatcatatcc cggctgaata
    10261 cgcagcgtca tcggccacgc tttctggcgc gcggcttctg ccagtaccgc aggttgcaac
    10321 tggtcggcaa gaaactgatc attatcgccc tgatcgataa gcgtcgggat cgcatcctgc
    10381 gcgttactgg catacatcag cgcgcaactg tcccattcca gccatgcatt tttgtcctca
    10441 cctaaatagc tgctaaacgc tttgattccc cacgggacgc tgcacggatt cacaattggc
    10501 gcaaaggccg aaacgctggt gtatttaccc ggatttttca gcgccataat cagcgcaccg
    10561 tgaccaccca ttgagtgacc gctaatggcg cagcggtcgc tgacattaaa ttgcgactga
    10621 accagcgccg gtaattcatc gcgcagataa tcatacatcc ggtaatgcgt cgcccacggc
    10681 ggttgcgtgg cattaagata aaagcctgcg ccctggccta aatcgtagcc atcgtcgttg
    10741 gcaacctttt cgccgcgcgg gctggtgtct ggcatcacca gtacaatccc cagttctgcc
    10801 gccacgcgct gggcacccgc cttggtggtg aagttctcgt cattgcaggt taatccggaa
    10861 agccagtaca gcactggtgg cggggtgtga tcacgagggg gtgggagaaa gatactgaac
    10921 gtcatcgggc agtttaaggt actggagtcg tgtcgccagc gttgctgcca gccttcaaaa
    10981 cagcggtgct cttcgagcat ttccatgcgt ggctccttgt tgtgttgttt gcaatttctt
    11041 catcataccg tttattcaat gtgctgtgag taactttcac ttccgtattt gcataacgat
    11101 gttttaacat ctgctgatga aaggcagcgg caattacaat aattatcgct gtgaatactg
    11161 gattatgtgc gccgcctcac gcacaataat caggctgtaa atcagcttaa taactttgcc
    11221 cccacgcagg gcggaggcgt cacacctgca ggagaaatca taaatgccat cactcagtaa
    11281 agaagcggcc ctggttcatg aagcgttagt tgcgcgagga ctggaaacac cgctgcgccc
    11341 gcccgtgcat gaaatggata acgaaacgcg caaaagcctt attgctggtc atatgaccga
    11401 aatcatgcag ctgctgaatc tcgacctggc tgatgacagt ttgatggaaa cgccgcatcg
    11461 catcgctaaa atgtatgtcg atgaaatttt ctccggtctg gattacgcca acttcccgaa
    11521 aatcaccctc attgaaaaca aaatgaaggt cgatgaaatg gtcaccgtgc gcgatatcac
    11581 tctgaccagt acctgtgaac accattttgt taccatcgat ggcaaagcga cggtggctta
    11641 tatcccgaaa gattcggtga tcggtctgtc aaaaattaac cgtatcgtgc agttctttgc
    11701 ccagcgtccg caggtgcagg aacgtctgac gcagcaaatt cttattgcgc tacaaacgct
    11761 gctgggcacc aataacgtgg ctgtctccat tgatgcggtg cattactgcg tgaaagcgcg
    11821 tggcatccgc gatgcaacca gtgccacaac aacgacctct cttggtggat tgttcaaatc
    11881 cagtcagaat acgcgccacg agtttctgcg cgctgtgcgt catcacaact gattaaaagg
    11941 caggaaccat ggagcgcaac gtaacgctcg attttgttcg cggcgtcgcc attctgggga
    12001 tcctgctatt aaacatcagc gcctttgggc taccaaaggc ggcttatctc aatcgcgcct
    12061 ggtacggcgc tattacgccg caggatgcat ggacctgggc atttctcgat ctcatcggcc
    12121 aggtgaaatt cctcacgctt tttgcgctgc tgtttggtgc gggcctgcaa atgttgctgc
    12181 cccgtggcag acgctggatc cagtcgcggt taacgctgtt agtcttgctg ggttttattc
    12241 acggtttatt gttctgggac ggcgatattc tgctggctta cgggctggtg ggcttaatct
    12301 gctggcggct ggtgcgcgat gcgccatcgg taaaaagcct gtttaataca ggcgtcatgc
    12361 tttatctggt ggggcttggc gttttgctgt tattggggct gatttccgac agccagacca
    12421 gccgcgcctg gacgccggat gcatcggcta ttttgtatga aaaatactgg aagcttcacg
    12481 gcggcgttga agcgatcagt aatcgtgccg atggtgttgg caacagttta ctggcactgg
    12541 gcgcacagta tggctggcaa ctggcaggga tgatgctcat tggtgcggcg ctgatgcgca
    12601 gcggctggct gaaagggcag ttcagcttac gtcactatcg tcgtactggt tttgtgctgg
    12661 tggcgattgg ggtgaccatt aaccttcctg ccatcgccct gcaatggcag ctggactggg
    12721 cgtatcgctg gtgtgccttc ttacttcaaa tgccgcggga actgagtgcg ccgtttcagg
    12781 cgattggcta tgcgtcgctg ttttatggct tctggccgca attgagccgc tttaagctgg
    12841 tgcttgcgat cgcctgcgtc ggacggatgg cgctgaccaa ctatctattg caaacgctga
    12901 tttgtaccat gcttttttac cacctcggtt tgtttatgca ttttgaccgc ctggagctgc
    12961 tggcgtttgt tattccggta tggctggcga atatcctctt ctctgttatc tggctgcgtt
    13021 acttccgcca ggggccggtg gaatggctct ggcgtcagtt aactttgcgt gctgccggaa
    13081 cggcaatatc taaaacatca agataacgat ctggatcaca ttcgttaaca aaacggctgt
    13141 aaccgtttcc attgctgtga ctcgattcac gaagtcctgt attcagtgct gacaaaatag
    13201 ccgccagcaa gcagtcattt actgcaatct cataacaggt agtgaatatg atcaccattc
    13261 gtgatgtagc gcgtcaggct ggcgtctctg tggcaacggt ttcccgggtg ctcaataaca
    13321 gcacgctggt cagtgccgac acgcgtgaag cagtaatgaa agccgtgagt gagctggatt
    13381 atcggccaaa cgccaatgcc caggcgctgg caactcaggt tagcgacacc attggcgtgg
    13441 tggtgatgga cgtttctgat gcgtttttcg gcgcgctggt aaaagcggtg gatctagtcg
    13501 ctcagcagca tcagaaatac gtgctaatcg gcaatagcta tcatgaagcg gaaaaagagc
    13561 gtcacgccat tgaggtgtta attcgccagc gttgtaatgc gttgattgtt cactcaaaag
    13621 cattgagtga cgatgaactg gcgcaattta tggataacat tcccggtatg gtgttaatca
    13681 accgcgttgt gccggggtac gcccatcgtt gcgtttgcct ggataatctc agcggtgccc
    13741 gaatggcgac gcgcatgttg ctgaataacg gtcatcaacg tattggttat ctttcttcca
    13801 gtcacggcat tgaagatgac gccatgcgta aagcaggctg gatgagtgcg ttgaaagagc
    13861 aggatattat tccgccggaa agctggattg gcactggtac gccggacatg ccgggcggtg
    13921 aggcggcgat ggttgaactg ctggggcgca atctacaact taccgctata tttgcttata
    13981 acgacaatat ggccgctggc gcactgacag cattaaaaga taatggcatt gcgattccgt
    14041 tacatctctc aatcatcggt ttcgatgata ttcccatcgc ccgttacacc gacccgcaat
    14101 taacgaccgt gcgttatccc attgcttcaa tggctaaatt agccaccgaa ctggccttgc
    14161 agggggcagc aggcaatatt gatcctcgtg ccagccactg ttttatgccg acgttagtgc
    14221 gtcgccattc tgtcgcaacg cgccagaatg cggcggcgat cactaactca acaaatcagg
    14281 cgatgtaacc gctttcaatc tgtgagtgat ttcacagtat cttaacaatg tgatagctat
    14341 gattgcaccg ttttaacgtt gtaacccgta tgtaacagtg aataatcact ttcaccgagg
    14401 taatagcgtc ataacaacaa ttaaagccgt tttctggagc gttaccgggc atggaagaac
    14461 gaattttaaa aagtgagctt cggcgttcag taacacttca ttaactctac tgccctgccg
    14521 agcatttatc tcaagcacta ccctgcataa gaaaaaccgg agataccatg aataagaagg
    14581 tgttaaccct gtctgctgtg atggccagca tgttattcgg tgccgctgca cacgctgctg
    14641 atactcgcat tggtgtaaca atctataagt acgacgataa ctttatgtct gtagtgcgca
    14701 aggctattga gcaagatgcg aaagccgcgc cagatgttca gctgctgatg aatgattctc
    14761 agaatgacca gtccaagcag aacgatcaga tcgacgtatt gctggcgaaa ggggtgaagg
    14821 cactggcaat caacctggtt gacccggcag ctgcgggtac ggtgattgag aaagcgcgtg
    14881 ggcaaaacgt gccggtggtt ttcttcaaca aagaaccgtc tcgtaaggcg ctggatagct
    14941 acgacaaagc ctactacgtt ggcactgact ccaaagagtc cggcattatt cagggcgatt
    15001 tgattgctaa acactgggcg gcgaatcagg gttgggatct gaacaaagac ggtcagattc
    15061 agtccgtact gctgaaaggt gaaccgggcc atccggatgc agaagcacgt accacttacg
    15121 tgattaaaga attgaacgat aaaggcatca aaactgaaca gttacagtta gataccgcaa
    15181 tgtgggacac cgctcaggcg aaagataaga tggacgcctg gctgtctggc ccgaacgcca
    15241 acaaaatcga agtggttatc gccaacaacg atgcgatggc aatgggcgcg gtagaagcac
    15301 tgaaagcaca caacaagtcc agcattccgg tgtttggcgt cgatgcgctg ccagaagcgc
    15361 tggcgctggt gaaatccggt gcactggcgg gcacagtact gaacgatgct aacaaccagg
    15421 cgaaagcgac ctttgatctg gcgaaaaacc tggccgatgg caaaggtgcg gctgatggca
    15481 ccaactggaa aatcgacaac aaagtggtcc gcgtacctta tgttggcgta gataaagaca
    15541 acctggctga attcagcaag aaataagact gattgggcgc agtcgtttac tgcgccctta
    15601 ttgtatggcc aacaaggtaa aattatatgg tcagctcaac gactccgtct tccggggaat
    15661 acttgttgga aatgagcggt atcaacaagt cctttcctgg tgttaaggca cttgataacg
    15721 ttaatttaaa agtccggcca cattctatcc atgcattaat gggggaaaac ggtgcaggaa
    15781 aatcgacatt attaaaatgc ctgtttggta tttatcaaaa agactccggc accattttat
    15841 tccagggtaa agagatcgat ttccattccg ccaaagaggc actggaaaat ggtatttcga
    15901 tggtacacca ggagttaaac ctggtattac aacgttcggt gatggataac atgtggctga
    15961 ggcgatatcc caccaaaggc atgtttgtcg atcaggacaa aatgtaccgc gaaaccaaag
    16021 cgatttttga tgaactggat attgatatcg atccgcgtgc gcgcgtcggc acattatccg
    16081 tttcgcaaat gcagatgatc gaaatcgcca aagcgttttc ctataacgcg aaaattgtga
    16141 ttatggatga accgacttct tcgttaaccg aaaaagaggt caatcatctg ttcactatta
    16201 ttcgtaaatt aaaagagcgc ggctgcggta ttgtttatat ctcgcataaa atggaagaaa
    16261 tcttccagtt atgtgatgaa gttaccgtat tgcgcgacgg tcagtggatc gccaccgaac
    16321 cgctggcagg actgacgatg gacaagatca tcgccatgat ggttgggcgt tctcttaatc
    16381 agcgttttcc tgacaaagaa aacaagccgg gcgaagtcat cctcgaggtg cgtaacctaa
    16441 cgtcactgcg ccagccgtcg attcgcgatg tctcgtttga tctgcataaa ggggagatcc
    16501 tcggtattgc cgggctggtg ggggcgaaac gtaccgatat tgttgagacg ttatttggta
    16561 ttcgcgagaa atcggctggc accattacgt tgcacggcaa acagatcaat aaccataatg
    16621 ccaacgaagc cataaaccac ggatttgcac tggtaactga ggagctccgc tcaacgggaa
    16681 tttatgccta tctggatatt ggttttaact cgttaatttc caatattcgc aactacaaaa
    16741 ataaagttgg tttactggat aaatcgcgga tgaaaagcga tacccagtgg gtgattgatt
    16801 cgatgcgggt aaaaacaccg gggcatcgga cgcaaattgg ttcgctctca ggtggtaatc
    16861 agcaaaaggt gattattggg cgctggctac taacgcaacc agaaatatta atgctcgatg
    16921 aaccgacgcg cggtattgat gtcggggcga agtttgagat ctatcagtta attgccgaac
    16981 tggcgaagaa aggcaaaggg attattatta tctcctctga aatgcctgag ttgttaggga
    17041 taacagaccg tattctggtc atgagcaatg gtctcgtttc cggaattgtc gacacaaaaa
    17101 caacaacgca aaacgaaatt ctgcgtcttg cgtctttgca cctttaagat taggggcttc
    17161 ccatgagtgc gttaaataag aaaagttttc ttacttacct gaaagagggc ggtatttacg
    17221 tcgttctttt agttttgctg gcgattatta ttttccagga cccaacattt ttaagtctgt
    17281 tgaacttaag taatattctc acccagtcat cggtgcgtat tattatcgcg ctcggtgtgg
    17341 cagggttaat tgtcacccag gggaccgacc tttctgcggg gcgtcaagta gggctggcag
    17401 cagtggtggc agcgacatta ttgcagtcca tggataacgc caataaagtg ttcccggaaa
    17461 tggcgacgat gccgattgcg ctggttattc tgattgtctg tgccattggt gcggtgatcg
    17521 gtttgatcaa cggtctgatt atcgcttatc tcaacgttac gccgttcatt accacgctcg
    17581 gcacgatgat catcgtctat ggcatcaact cgctctatta cgactttgtc ggggcgtcgc
    17641 caatttctgg ttttgacagt ggcttctcta cctttgctca gggctttgtc gcgctgggga
    17701 gtttccgtct ctcttacatc accttctacg cgttgattgc ggtggcgttc gtctgggtgt
    17761 tgtggaacaa aacccgcttc ggtaagaaca tttttgccat tggcggtaac ccggaagcgg
    17821 caaaagtatc tggtgtcaac gtcggcctga acctgctgat gatctacgcg ttgtctggcg
    17881 tgttctatgc ctttggcggg atgttagaag ccggacgtat cggctctgcc accaacaacc
    17941 tcggctttat gtatgagctg gatgctatcg cggcgtgcgt ggtaggcggt gtatcgttca
    18001 gcggcggtgt ggggacggtg attggcgtgg tgaccggggt aattattttt accgtcatca
    18061 actatggcct gacgtatatc ggcgtaaacc catgctggca gtacatcatc aaaggggcga
    18121 ttattatctt cgccgtagcg ctggattcac tgaaatacgc gcgtaagaaa tgatgtgaat
    18181 gtggtccgca ttcggtcata aacgcacata acatcatgat ctgtgtggtt ttgtaggccg
    18241 gataaggcgt tcacgccgca tccggcaaca ggagccaaat gccggatgca acgctggcgc
    18301 gttttatccg gcctacaata agctcaacat actgatttgt atggttttgt aggccggata
    18361 aggcgttcaa gccgcatccg gcgacaggaa ccaaatgccg gatgtgacgc gggttctaca
    18421 acgttaccgg gtgttctttc tcgcctttct taaacttcac ttccccgagc tcaatacaac
    18481 ccaccgggca gacgtgacca caaagcagac aacccacaca tttctcggta ttacaatgcg
    18541 gtgtgcgggt tttctcgctc cattccatcg cctggtgacc gccgtcgtaa caggaaatat
    18601 aacagcgtcc acagccaaca catttgtcaa gattgatacg gggatagaca atataactgc
    18661 ggtctaaatc ttccgccggg acaatattgt tattcgccag acctaccatc tcctgcaacg
    18721 aatcaaatcc ctgatcggcg agataatgcg ataacccgct cgccatatct tctacgatgc
    18781 gattgccgta ctgcataatg ccggtggtga cctgtaacgt tgctgcgccg agcaataaaa
    18841 actccgccgc atcctcccag gtttcaatgc cgccgatacc gctgattggg aaatcgcgca
    18901 gttctggatg ggtgcgcatt tgctgaatga agcgcagggc gatcggtttt accgctttac
    18961 cggaatatcc ggaaatactc gatttaccgt taacgatcgg cataccgatt ttctgattaa
    19021 gatcgatatt ggtgatggat ttaacggtgt taattgccgc aatgccatct gcgccgccgc
    19081 gcttcgccgc cagcgccact tcgcacatat caccgatatt cggcgtcatc ttcgccagca
    19141 ttggcagcgt ggaaccgcgt ttcaccgccc gacaatattt ttctaccagc accggacttt
    19201 gcccgacatc gctacccatc gcatgagaag tcatttgcgg acaggagaag ttacactcga
    19261 tcatatccgc gccagctcct cccattgctg ctcattttcc cccatgatcg aagcga
//
LOCUS       DAJVUK010000077        19153 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.077, whole genome shotgun sequence.
ACCESSION   DAJVUK010000077 DAJVUK010000000
VERSION     DAJVUK010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19153
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.077"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..909)
                     /locus_tag="OQQ57_002418"
     CDS             complement(<1..909)
                     /locus_tag="OQQ57_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HCS1957155.1"
                     /translation="MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDS
                     LKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAV
                     MQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
                     TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYIL
                     LTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLL
                     RLLLQNGADPEWIQRYTGLSAEQMQAL"
     gene            1376..2608
                     /gene="mdtM"
                     /locus_tag="OQQ57_002419"
     CDS             1376..2608
                     /gene="mdtM"
                     /locus_tag="OQQ57_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HCS1957156.1"
                     /translation="MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFN
                     ADVSLAPAAVSLYLAGGIALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMT
                     QFLIARAIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAAL
                     MHFVHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVFRDFRNVFCNRLFL
                     FGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVK
                     DPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFT
                     LFSNNLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLA
                     GLLNRVRQHQAAELAEER"
     gene            2649..3929
                     /locus_tag="OQQ57_002420"
     CDS             2649..3929
                     /locus_tag="OQQ57_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HCS1957157.1"
                     /translation="MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIA
                     EAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
                     VALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAI
                     DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEH
                     PLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDP
                     EMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKADINSEDSRVKERIARAGQWFGE
                     TLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKD
                     LQFIRVNGTLVGGCIGLILYLLSQLPALFPLSNF"
     gene            4045..5197
                     /locus_tag="OQQ57_002421"
                     /pseudo
     CDS             4045..5197
                     /locus_tag="OQQ57_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418755.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase subunit D"
     gene            5207..5975
                     /locus_tag="OQQ57_002422"
                     /pseudo
     CDS             5207..5975
                     /locus_tag="OQQ57_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313324.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5972..6229
                     /locus_tag="OQQ57_002423"
     CDS             5972..6229
                     /locus_tag="OQQ57_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HCS1957158.1"
                     /translation="MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLC
                     IWLTCPPGEEIQWVIPGLTESIYCQQDGVWRCIAHYRVSPR"
     gene            6183..7154
                     /locus_tag="OQQ57_002424"
     CDS             6183..7154
                     /locus_tag="OQQ57_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HCS1957159.1"
                     /translation="MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISL
                     SKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTW
                     SAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYA
                     IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN
                     GLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG
                     EISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPKSSH"
     gene            7222..8394
                     /locus_tag="OQQ57_002425"
     CDS             7222..8394
                     /locus_tag="OQQ57_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1957160.1"
                     /translation="MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAE
                     GAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLVSALARGLLILAMAWL
                     PPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGL
                     HFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYG
                     LAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLT
                     ANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGF
                     VTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS"
     gene            complement(8407..8962)
                     /gene="kptA"
                     /locus_tag="OQQ57_002426"
                     /pseudo
     CDS             complement(8407..8962)
                     /gene="kptA"
                     /locus_tag="OQQ57_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151849.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
     gene            9212..9894
                     /locus_tag="OQQ57_002427"
                     /pseudo
     CDS             9212..9894
                     /locus_tag="OQQ57_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418750.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9891..10352
                     /locus_tag="OQQ57_002428"
     CDS             9891..10352
                     /locus_tag="OQQ57_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiG family protein"
                     /protein_id="HCS1957161.1"
                     /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
                     TGLLDWVGHICEPVMALWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTV
                     LLPAMYLMGNPVQNVGRCLGTAEVNAKYYPHIITVCVINALLSIWVMQLIV"
     gene            10365..11537
                     /gene="iadA"
                     /locus_tag="OQQ57_002429"
     CDS             10365..11537
                     /gene="iadA"
                     /locus_tag="OQQ57_002429"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HCS1957162.1"
                     /translation="MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPS
                     DIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG
                     LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIG
                     VKCAISDHRSAAPDVYHLANMAAESRVGGLLGSKPGVTVFHMGDSKKALQPIYDLLEN
                     CDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIP
                     LARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTS
                     SVAGFLNLSGKGEILPGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA"
     gene            11602..12513
                     /gene="hypT"
                     /locus_tag="OQQ57_002430"
                     /gene_synonym="qseD"
     CDS             11602..12513
                     /gene="hypT"
                     /locus_tag="OQQ57_002430"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HCS1957163.1"
                     /translation="MDDCCAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSR
                     RIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK
                     IKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL
                     EAPFDHIRLFESQLFPVCASDEYGEAIFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS
                     ELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGQLVVLNRDELVIPIQAY
                     AYRMNTRMNPVAERFWRELRELEIVLS"
     gene            complement(12506..12898)
                     /gene="iraD"
                     /locus_tag="OQQ57_002431"
     CDS             complement(12506..12898)
                     /gene="iraD"
                     /locus_tag="OQQ57_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313312.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HCS1957164.1"
                     /translation="MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLL
                     VSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIM
                     LYHDDEPLTFDLVWDNGGWRSATLENVS"
     gene            complement(12895..12978)
                     /gene="idlP"
                     /locus_tag="OQQ57_002432"
     CDS             complement(12895..12978)
                     /gene="idlP"
                     /locus_tag="OQQ57_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iraD leader peptide IdlP"
                     /protein_id="HCS1957165.1"
                     /translation="MENEHQYSGARCSGQAAYVAKRQECAK"
     gene            13570..14400
                     /locus_tag="OQQ57_002433"
     CDS             13570..14400
                     /locus_tag="OQQ57_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HCS1957166.1"
                     /translation="MSMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIY
                     LLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYATDTCREFNGITTTGRMLYRNLKI
                     TSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYA
                     GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGN
                     DPIIGIEAYPGTAEIHAKMGYNVIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
                     "
     gene            complement(14541..15314)
                     /gene="uxuR"
                     /locus_tag="OQQ57_002434"
     CDS             complement(14541..15314)
                     /gene="uxuR"
                     /locus_tag="OQQ57_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HCS1957167.1"
                     /translation="MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLD
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDANVCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA"
     gene            complement(15529..16989)
                     /locus_tag="OQQ57_002435"
     CDS             complement(15529..16989)
                     /locus_tag="OQQ57_002435"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HCS1957168.1"
                     /translation="MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHH
                     LLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALH
                     PEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS
                     AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENV
                     TFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKV
                     GAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNPDYRKAAFALMMQE
                     QAPTLSMPEGTDLKAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN
                     GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLS
                     GIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL"
     gene            complement(17070..18254)
                     /gene="uxuA"
                     /locus_tag="OQQ57_002436"
     CDS             complement(17070..18254)
                     /gene="uxuA"
                     /locus_tag="OQQ57_002436"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709912.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HCS1957169.1"
                     /translation="MEQTWRWYGPNDLVSLADVRQAGATGVVTALHHIPNGEVWSVEE
                     ILKRKAIVEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAE
                     RFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKA
                     IIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYG
                     VRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEE
                     HRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SR"
     gene            18594..18798
                     /locus_tag="OQQ57_002437"
                     /pseudo
     CDS             18594..18798
                     /locus_tag="OQQ57_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646216.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19041..>19153)
                     /locus_tag="OQQ57_002438"
     CDS             complement(19041..>19153)
                     /locus_tag="OQQ57_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1957170.1"
                     /translation="GTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ"
BASE COUNT         4477 a         4871 c         4805 g         5000 t
ORIGIN      
        1 taatgcctgc atttgctctg ccgaaagtcc ggtatatcgt tgtatccatt caggatcggc
       61 cccattctgc aacaacaatc ggaggaggct ccgttcccct tctactttcc cttctttcct
      121 ccccctctcc cttcccaaca gccatccatc attatgaatt cgctctgcaa ttgtcattat
      181 tcgctccctg tggtgtggca ttcgcctggt aagttcgctg ataaacgcct taaaacgcgc
      241 ttcatcgcca gtcagtaaaa tgtaatttaa cagcgcagtt atctggctgt cattagcaca
      301 ctctgtaacc agtaatacta ccagttggtc aataagcccc atcaaatcgc gctggcgaat
      361 atgcttttgg atcaactcca acagggcgac tctgcgatgc tgcacaatct cgtcgtctgg
      421 cacgacagtg acatccacca gcgggaacgc tgcgctataa agtttccgtg cggtagtcgg
      481 ggcggcaaat tcgtccagcc agcacaggga ccaggggtaa ggactacggc taccgtgata
      541 aaacagcatc gggataacca gcggtagcgg ccggcgttta tcatgctcga tatggcgctg
      601 catcaccgcc atggaatatc gcatcaggcg aaatgccata tgaatatcct cgcggctctg
      661 atgttcaatc actacgtaaa tataaccatc accttcacgg gtctttaccg accacagaat
      721 atcggagtgt agcgcccgca atttttcatc gacaaagctg gcggattcca gttttaagct
      781 gtcgagatcg cacagttcac gtaaatcttt gggtaagtgg atctccataa aatcccgcgc
      841 ggtgtcaggg tgagtgagaa aggatttaaa taatgcgtca tgtggcgtgc tggtcgtgaa
      901 gtttgtcatg gcgatccgtc acctgtagat aagatggccc gactttagcg actaacaaaa
      961 ccattctcac ccggcaattt ctcgttcccc gaggtgcttt ccaggcgtct gcaaacgata
     1021 catttttccg gaaacaggct cgcgttttac atttcctgta cccggcagat attccccttt
     1081 ccaccgcgct cttttgatta accgcaaatt ttaattacac ttaaggtgta tattttctat
     1141 gcaacccatc aattaaagag gtgtaatgtg ctgatgacta tttgtaatcg ttatacattc
     1201 tgacctggag tcagaaggta tttctctgtc tgtgtgttca caggcagtgt ggttgattac
     1261 atgaaattca gtacatttgc agtctcgttg cccttctcgc ctgcctttcg tcattaccga
     1321 cggtattgaa tttcgttttc cccgttgggg ttctccgaac aaggagttgt ttgttatgcc
     1381 acgttttttt gcccgccatg ccgccacgct gtttttcccg atggcgttga ttttgtatga
     1441 ctttgccgcg tacctgtcga cggatctgat ccagccgggg atcattaatg tggtccgtga
     1501 ttttaatgcc gatgtcagtc tggccccggc agccgtcagt ctctatctcg cgggcggtat
     1561 agcgttacag tggctgctgg ggccgctttc cgacaggatt ggccgcaggc cggtgctgat
     1621 taccggggcg ctaatattta cccttgcctg cgctgcgaca atgttcacaa cgtctatgac
     1681 acagtttctt atcgcgcgtg caattcaggg caccagtatc tgttttattg ccaccgttgg
     1741 ttatgtcacg gtgcaggagg cgttcggcca gacaaaaggg atcaagttga tggcgattat
     1801 cacctccatc gtactgattg cgccgattat tggcccgctt tccggcgcag ctctgatgca
     1861 ctttgtgcac tggaaagtcc tttttgccat cattgcagtt atgggtttta tctcatttgt
     1921 tggcttactg ctggcgatgc cagagacggt gaagcgcggc gcggttccat ttagcgccaa
     1981 aagcgtcttt cgcgattttc gtaatgtctt ttgcaatcgg ctgttcctct ttggcgcagc
     2041 aaccatctct ttaagctata tcccaatgat gagttgggtg gctgtctcgc cggtgatcct
     2101 gatcgacgcg ggcagcttaa caacttcgca gttcgcctgg acacaggttc cggtgttcgg
     2161 cgcggtgatt gtcgcgaatg ccatcgtggc gcgtttcgtt aaagatccga ccgaaccgcg
     2221 ctttatctgg cgtgctgtac ccattcaact ggtcggcctc gcgctgttga ttatcggcaa
     2281 tctgctgtca ccgcacgtct ggctgtggtc ggtgctgggc accagtttgt atgctttcgg
     2341 gattggtttg atcttcccga ccttattccg ctttacgctt ttttccaata acttaccgaa
     2401 agggaccgtc tccgcatcgc tgaatatggt gatcctgatg gtgatgtctg tctcggtcga
     2461 aatcggccgc tggctgtggt ttaacggcgg tcgcttgccg tttcatctgt tagccgtcgt
     2521 ggcgggcgtt atcgtcgttt tcaccctggc aggattgctt aatcgcgtgc gccaacatca
     2581 ggctgccgag ctggcggagg agcggtgatt tttgcgcgat cctgccgtca ggctctattc
     2641 ttaacgttat gaataaactc attgaactca gacgcgccaa aatgttggcg ctctctttac
     2701 tgcttatcgc cgctgctacc tttgtcgtta cgctgttttt gccgcccaat ttttgggtga
     2761 gcggcgtgaa ggcgattgct gaagcggcga tggtcggcgc gctggcggac tggtttgcgg
     2821 tggtggcgct gtttcgccgc gtgccgattc cgatcatttc tcgtcatacg gcgattatcc
     2881 cgcgtaataa agaccggatt ggcgaaaatc tcggtcagtt cgtgcaggaa aaatttctcg
     2941 atacccagtc gctggtggca ttgattcgac gtcacgaacc ggcgttgttg attggcaact
     3001 ggtttagtca gccggagaac gcccgccgcg ttggtcagca tctgttgcag atcatgagcg
     3061 gttttcttga actgaccgat gatgcgcgta ttcagcgcct gcttaagcgc gcggtccatc
     3121 gggcgattga taaggtcgat ctttccggaa ccagtgcgtt gatgctggag agtatgacca
     3181 aaaacgatcg tcatcaggtg ctgctcgata cgctgatcgc acagttgatc gcccttctcc
     3241 agcgcgataa atcgcgcaag tttattgccc agcaaattgt tcgctggctg gagagcgagc
     3301 atccgctgaa agccaaaatt ttgcctactg aatggctggg cgaacatagc gcggagttgg
     3361 tttctgacgc ggtgaattct ttgcttgatg atatcagccg cgatcgtgcg catcagatcc
     3421 gtcatgcgtt tgatcgcgcc acttttgccc tgatcgacaa gctgaaaaac gatccagaaa
     3481 tggcagcgcg agccgatgcc gtaaaaagtt atctgaaaga agatgaagct tttaaccgct
     3541 atctcagtga attgtggggg gatttacggg aatggctgaa agcggatatc aacagtgaag
     3601 attctcgtgt gaaagaacgt atcgcgcggg cgggtcaatg gtttggcgaa acgttaattg
     3661 ccgatgatgc cttgcgggca tcgttaaatg gtcacctgga acaagccgcg caccgcgtcg
     3721 cgcctgagtt ttccgcattc ctgacgcgcc acatcagcga tacagtaaaa agctgggatg
     3781 ctcgggatat gtcgcggcaa atcgagttaa atatcggcaa agatctgcag tttatccgtg
     3841 tcaacggtac gctggttggc ggttgtattg ggctaatttt atatttgttg tcgcagctcc
     3901 cggccttgtt ccccctcagc aatttttaga aatccatgaa aaactaagtg gctaaccgcg
     3961 agagagatca aataaaccac actaaaagaa tggtaataat gtggcctctt ttcattatct
     4021 cccgtggtac ggggaaggaa aatcatgtca cttatcaccg atctacccgc cattttcgat
     4081 cagttctctg aagctcgcca gaaaggcttt ctcaccgtca tggatctcaa ggagcgcggc
     4141 attccgctgg ttggcactta ctgcaccttt atgccgcaag agatcccgat ggcagccggt
     4201 gcggttgtgg tttcgctctg ttctacctct gatgaaacca ttgaagaagc ggagaaagat
     4261 ctgccgcgca acctctgccc gctgattaaa agcagctacg gcttcggcaa aaccgataaa
     4321 tgcccctact tctacttttc ggatctggtg gtcggtgaaa ccacctgcga cggcaaaaag
     4381 aaaatgtatg aatacatggc ggagtttaag cccgttcatg tgatgcagtt gccgaacagc
     4441 gttaaggacg atgcctcgcg tgcgttatgg aaagccgaga tgctgcgctt gcaaaaaacg
     4501 gtagaagaac gttttgggca cgagattagc gaagatgctc tgcgcgatgc cattgcgctg
     4561 aaaaaccgcg aacgtcgcgc actggccaat ttttatcatc ttgggcagtt aaatcctccg
     4621 gcgcttagcg gcagcgacat tctgaaagtg gtctacggcg caaccttccg gttcgataaa
     4681 gaggcgttga tcaatgaact ggatgcaatg accgcccgcg ttcgtcagca gtgggaagaa
     4741 ggccagcgac tggacccgcg tccacgcatt ttaatcaccg gctgcccgat tggcggcgca
     4801 gcagaaaaag tggtgcgggc gattgaagag aatggcggct gggttgtcgg ttatgaaaac
     4861 tgcactgggg cgaaagcgac cgagctaatg cgtggcggaa acgggcgatg tctacgacgc
     4921 gctggcggat aaatatctgg cgattggctg ctcctgtgtt tcgccgaacg atcagcgcct
     4981 gcaaatgctc agccagatgg tggaagaata tcaggtcgat ggcgtagttg atgtgatttt
     5041 gcaggcgtgc catacctacg cggtggaatc gctggcgatt aaacgtcatg tgcgtcagca
     5101 gcacaacatt ccttatatcg ctattgaaac agactactcc acctcagatg tcgggcagct
     5161 cagtacccgt gtcgcggcct ttattgagat gctgtaagga gtggcagtga catattcgat
     5221 tggcattgat tctggttcta ccgccaccaa agggatctta ctggcagacg gcgtgattac
     5281 gcgccgtttc ctcgttccaa caccctttcg tccggcaaca gcaattactg aagcctggga
     5341 aactctgcgc gaagggttag agacaacgcc gtttctgacg ctcaccggct atggacggca
     5401 actggtggat tttgccgata aacaagtgac ggaaatctcc tgtcacgggc tgggcgcacg
     5461 gtttcttgcg ccagcaacgc tgcgcggtaa tcgacatcgg tggtcaggac agcaaagtga
     5521 ttcagcttga tgatgacggt aacctgtgcg atttcctgat gaatgacaaa tgcgcggcgg
     5581 gcaccgggcg tttcctggaa gtgatctcgc gcacgcttgg caccagcgtc gagcaactcg
     5641 acagcattac cgaaaatgtc acgccgcatg ccatcacgag tatgtgcaca gtgtttgccg
     5701 aatcagaagt gatcagcctg cgctcagcgg gcgtcgcgcc agaagcgatt ctcgccggag
     5761 tgattaacgc gatggcgcgg aggagtgcca atttcattgc tcgtctctcc tgtgaagcgc
     5821 cgattctgtt tactggtggc gttagtcatt gccagacgtt tgcccggatg ctggaatctc
     5881 acctgggaat gccggtaaat acccatcctg atgcgcaatt tgctggcgca attggcgcgg
     5941 cggtaattgg tcaacgagtg aggacacgcc gatgaaagag tttttatttt tatttcactc
     6001 cacagtcggc gtcatacaaa ctcgcaaagc gttgcaggca gcgggcatga cttttcgcgt
     6061 cagcgatatt ccccgtgatt tacgcggcgg ctgcgggtta tgcatttggc tgacctgtcc
     6121 ccccggcgaa gaaatacaat gggtgatccc tgggctgact gagtcaattt attgccagca
     6181 ggatggtgtc tggcgctgca ttgcacatta ccgggtttct ccgcgttaag gattcattaa
     6241 ggtcgctacg tatacttctc gatatcttat tgatttgcct taaagggatt accgtgacaa
     6301 aaagtatttc gttaagtaaa cgcatctccg ttattgtgat tctttttgcc attgtggcag
     6361 tgtgtacttt cttcgtgcaa tcttgcgccc gtaaaagcaa tcatgcagca tcatttcaga
     6421 attaccacgc caccattgac ggcaaagaaa ttgcaggcat aacgaataat atctcttcgc
     6481 tgacctggtc ggcacaaagc aatactcttt ttagcactat caacaaacct gccgccattg
     6541 ttgaaatgac caccaatggt gattttatcc gcacaattcc tctggatttt gttaaggatc
     6601 tcgagacgat cgaatacatt ggcgataatc agtttgtcat tagcgatgag cgcgattacg
     6661 ccatttatgt gatttcactg accccaaact cggaagtaaa aatcctcaaa aaaataaaaa
     6721 tcccgctgca agactcccca accaattgcg gttttgaagg gttagcttat tctcgccagg
     6781 atcacacttt ctggtttttt aaagagaaaa atccgattga ggtctacaaa gttaacgggc
     6841 tgttaagtag caatgaatta cacatcagca aagacgaggc actacaacgg caatttactt
     6901 tagatgatgt gtccggcgca gaatttaacc agcaaaaaaa tacgcttctg gtgctgtctc
     6961 atgaatctcg cgcactccag gaagtaaccc tggttggcga ggttatcggt gaaatatcac
     7021 taaccaaagg tagtcgaggt ttgtcgcata acatcaaaca ggccgaaggg attgcgatgg
     7081 atgcctctgg taatatttat atcgttagcg aaccaaatcg tttttatcgc tttaccccta
     7141 aatcatcgca ttaacaggct ggcatatttc acctttttgt tattaacttg ttaacaacaa
     7201 aaataacata caaggttaaa catgccttcg tcctcgcatc ccgtagaacg cttttctttc
     7261 agcaccgcgc ttttcgggat gctggttctg accctaggta tgggattagg tcgcttcctt
     7321 tatacgccta tgttgcccgt cattatggcg gaaggggcgt tttcatttag ccagctctcg
     7381 tggattgcca gcggcaacta tgcggggtat ctggctggca gtctgctatt ttcgtttggc
     7441 gcatttcacc agccgtcgcg cctacgccca tttctgttgg tttctgccct ggcgagaggg
     7501 ttgttgatcc tcgcaatggc atggttgccg ccatttattc tggtgttatt gattcgcttc
     7561 ctggcgggtg tcgccagcgc cggtatgctg atttttggtt cgacgctgat tatgcagcac
     7621 acgcgccatc cttttgtgct ggcagctttg ttttctggcg ttggcattgc actgggcaac
     7681 gaatatgttc tggcaggcct gcattttgcc ttctcctcgc aaacgttatg gcaaggcgcc
     7741 ggggcgcttt ctggcatgat gctgattgca cttacgcttt taatgccctc gaaaaaacac
     7801 gccatcgcac caatgccatt ggcaaaaacg gagcaacaga taatgagctg gtggttactg
     7861 gctattctgt acggccttgc gggatttggt tatatcatcg tcgcgactta cctgccgctc
     7921 atggcgaaag atgcaggctc accattgtta accgcccatc tctggacgtt agtcggctta
     7981 tcaattgtgc caggctgctt tggctggcta tgggcagcaa aacgttgggg ggctttgcct
     8041 tgcctgacgg cgaatttgct ggtgcaggct atcagtgtgc tgcttactct cgccagcgac
     8101 tctcctctct tgcttatcat tagtagtatc ggttttggcg gtacctttat gggcacgaca
     8161 tctctggtga tgactatcgc ccgccaactg agcgttccgg gaaatctcaa tcttttaggc
     8221 tttgtgacgc tcatttacgg cattggacaa atcctcggcc cggcgctgac cagtatgctc
     8281 ggcaatggaa catcggcgct tgccggcgcc actctctgcg gcgcggcggc gttgtttatt
     8341 gctgcgctta tcagcacagt acaattattt aagctgcaag tggtcacttc atgaggagtg
     8401 tttcccttac cactcaagaa attcgaccgc aaccgttgat gtcagccaga ctccgttttc
     8461 cgcttgccag aaaggaatgc ctcgtttcgc catttcctgt gctttgacgg ttaagacaac
     8521 cggcgatccg tgtcttgctc ccactttgcg tgccgttgct tcatcagcag agagatgcac
     8581 gtaatgacga tcccctgcaa tcagcccctg ttttttttat ctcgtcaagg aaacggcttg
     8641 ccgtaccgtg gtagagaaac tgtggcggtg ttttttcggc aaaggaaata gcgacctgcg
     8701 aagtcgaatg cccctgaacc gcgcggatgc acctaccatc actggaataa ctaaaacgct
     8761 ttttatcgct ggttgcgacc acggtatcca gcaatgcacg ggttaatcgc ttgcccgctt
     8821 tttgggcaca aagtatgagc ttatcgatat ccgcccatcc ttcacggtcc agtacgatac
     8881 caatcgcctc cggtttgtgt cggaggacaa aacttaaaaa cttgctcgta tccgccagct
     8941 ctttttcgtt gtgctttgcc atctcgtttt cgtccctgga ttttctgttt ttatttacca
     9001 atgtcattgt cactgggttt atgaattttc tgcaactcaa tcctgcgcag aaccttttcc
     9061 acacagcgta atgtttcccc tatgcaaaaa acgcatagcc agaaacatac ttgcattttc
     9121 cccataccca catggctgat aaggtttttc agttccagga attttcctgg ctcaagcaac
     9181 acacaaacac aaaaaaacaa tggggattgt tatgacacaa caaggggatg ctgtagccgg
     9241 ggagctggcg acagaaaaag tgggcattaa agggtatctg gctttttttc tcaccataat
     9301 cttttttccg gtgttttttc cggaacagac agctggtggc gcgtttttga tttttccgtt
     9361 ctgaacggat cgtttgggca actgcctggt gcgaacggag ccaccacctc atttcgcggc
     9421 gcgggtggtg cgggggctaa agatggcttt ctctttgcgc tggagctggc accgtcagtc
     9481 attctctctc tggggattat ttcaattacc gatggtcttg gtggattacg cgccgcgcag
     9541 cagttaatga cacctgtgct aaaaccgttg ttgggcattc cagggatctg ctcgctggcg
     9601 ctgatcgcta acttgcaaaa cactgatgcc gccgccggta tgaccaaaga gctggcgcag
     9661 gaaggtgaaa ttaccgaacg cgataaagtg attttcgccg catatcaaac cagcggtagc
     9721 gccatcatca ccaactactt ctcttccggc gtcgcggtgt tcgcctttct gggcacgtcc
     9781 gtaatcgtac ctttagccgt catcctggtg tttaaatttg tcggagccaa cattttgcgc
     9841 gtctggctta acttcgaaga acgtcgcaac ccaacgcaag gagcgcaagc atgacaactc
     9901 aggtccgcaa aaacgtcatg gatatgttta tcgatggcgc gcgccgtggc tttactatcg
     9961 ccacgaccaa cctgctgcca aacgtggtga tggcgtttgt catcattcag gcgctgaaaa
    10021 ttaccggcct gctcgactgg gtggggcata tctgtgaacc cgtaatggcg ctgtggggat
    10081 tacccggtga agcggcaacc gtccttttag ccgcattaat gagtatgggg ggcgcagtcg
    10141 gtgttgccgc cagtctggca accgctggcg cattaaccgg tcacgatgtc accgttttac
    10201 tgcccgcgat gtatttaatg ggcaacccgg tgcaaaatgt cggtcgctgc ctggggacag
    10261 ccgaagtgaa tgccaaatat tacccgcata tcattacggt ctgcgtgatt aacgcattgc
    10321 tgtcgatctg ggttatgcag cttattgttt aacaaggagt taccatgatt gattataccg
    10381 cagccggttt taccctgctg cagggagcgc atttgtatgc gccggaagat cggggaattt
    10441 gcgatgtcct cgtcgctaac ggcaaaatta tcgccgttgc cagcaatatc ccttctgaca
    10501 ttgtaccgaa ctgcacggtt gtcgatctca gtgggcagat cctctgccca ggttttattg
    10561 atcaacacgt ccatttgatt ggcggtggcg gcgaagcagg tcccacgacg cgcacgccgg
    10621 aagtggcgct aagtcgcctg acggaagcgg gcgtcacgtc agtggttggt ctgctgggca
    10681 ccgactctat ctctcgccac ccggaatccc tgctcgccaa gacccgtgcg ctcaatgaag
    10741 aaggcatcag cgcctggatg ctgaccggcg cttatcatgt cccttcccgc actattacgg
    10801 gttccgtgga aaaagacgtg gcgattatcg atcgtgtgat tggcgtgaaa tgcgccatct
    10861 ctgatcaccg ttctgccgca ccggacgttt atcacctggc taatatggcg gcagaatccc
    10921 gcgttggcgg tttgctcggc agtaaacctg gcgtcaccgt gttccacatg ggcgacagta
    10981 aaaaggcgtt acagcctatt tatgacctgc tggaaaactg cgatgtgccg atcagcaagc
    11041 tgctgccgac ccacgttaac cgcaacgtac cgttgtttga gcaggcgctg gagttcgcgc
    11101 gcaaaggcgg caccatcgat atcaccagca gcattgacga accggtcgcc cctgccgaag
    11161 gtattgcccg cgccgttcag gcgggtattc cgctggcacg cgtcaccctc agctccgacg
    11221 gcaacggtag ccagccgttc ttcgatgacg aagggaattt aacccatatc ggtgttgcag
    11281 gttttgaaac gttgctggaa accgtgcagg tgctggtcaa agactatgat ttcagtatca
    11341 gcgatgccct gcgcccgctc accagtagcg tagccggttt ccttaacctg agcgggaaag
    11401 gcgaaattct gcctggcaat gacgcagact tactagtcat gacgccagaa ttgcgcattg
    11461 agcaggtata tgctcgcggc aaactgatgg tcaaagacgg caaagcctgc gtgaaaggaa
    11521 cgtttgaaac ggcttaaacg gttgtcagcc gccctaatgg acgtagaatg cccgcaaggg
    11581 cggctgacag agtaaaacgt aatggatgac tgttgtgcgg ttttgcataa tattgaaacc
    11641 aaatggcttt atgattttct gaccctggaa aaatgccgca atttttccca ggcggcagtc
    11701 agtcgtaacg tctcgcaacc ggcattcagc cgccgcatcc gcgcgctgga acaggcgatt
    11761 ggcgttgaat tgtttaaccg ccaggtgacg ccgctgcaac tctcagaaca agggaaaatc
    11821 ttccattcgc agatccgcca tctgttgcaa cagttagaaa gtaaccttgc agagctgcgt
    11881 ggcggcagcg attacgcgca acgtaaaatc aagatagccg ctgcacactc tctttccctc
    11941 ggtctgttac cgtccattat cagccagatg ccgccgctct ttacctgggc gattgaagct
    12001 attgatgtcg atgaagcagt cgataaactg cgtgaagggc aaagtgactg tattttttcc
    12061 tttcacgacg aagatttgct ggaagcaccg tttgaccaca ttcgcttatt tgaatctcaa
    12121 ttgttccccg tttgcgccag tgacgaatac ggagaagcaa tttttaacct cgcgcagcca
    12181 cactttccgt tactgaatta cagccgcaac tcctacatgg ggcgattgat taatcgcacc
    12241 ctgacgcgcc acagcgagtt aagtttcagc accttttttg tctcttcgat gagcgagcta
    12301 ttaaagcagg ttgccctcga cggctgtggg attgcctggc tgccggagta tgccatccaa
    12361 caagaaattc gcagcgggca actcgttgtg ctgaatcggg acgaactggt gatcccgatt
    12421 caggcctacg cataccgtat gaatacccgc atgaatccag ttgccgaacg cttctggcgt
    12481 gaactgcgcg agctggagat tgtgcttagc tgacattctc aagcgtcgca ctgcgccaac
    12541 cgccattatc ccagaccaga tcaaacgtta gcggttcatc gtcgtggtac agcattatct
    12601 caaggctgat cgccagagtg tggcagtacg cttctttcaa attaacctgc aacgccgcaa
    12661 tccgtggctc atgaaataac agtgcagaac gcagctgacg gcaataccag ctctggagat
    12721 gtttgtcgct cgggttatgc acttgccact cgggcatgcc tgaaacaagt aatgacggta
    12781 atgccgaatg aggagaatta aaaagagtga ggagatcgct gcataccgat ttacgcagca
    12841 atgacgtttt attgcctgaa atttcaggta aaacagcctg aagtgattgg cgcatcattt
    12901 tgcgcactcc tgacgtttag caacatatgc ggcttgccct gaacaccggg caccactgta
    12961 ttgatgctca ttttccatag ccattccctt ttgttcatta catccatgtc agtctgagac
    13021 aggcctgaat cctgtcagca aagtataaaa ccttacttgc ctatgaatat ctactgactt
    13081 ttcaggaaaa aagtcatgat ttgataaaaa tcatcaaact caaaaaaaaa ccgctagtat
    13141 attctgaata ttccgaatag ttacgtagat gaaaatactt gtcaccgccg ctacttaatt
    13201 ccggtgggaa attatttatt tccgcataat cagccatgta ttatttgaaa caattagttt
    13261 gtaaataata taaattgata acatatcaaa tacatcaaaa ataccattca taggcattat
    13321 taatatagac atcaatatag caacatcaaa ttccaattag taataagata tgctttttaa
    13381 ttgcatgaaa ataatttcaa atgagcgttt tttgatactt tagagtgttt cctacccttt
    13441 aatatcaccg tgtagagttg atatcactac aacagaaaca tgcatgtcat ttttttactt
    13501 cttttttact acagaaaaat ttatctattt ttctaaacat cggtgaaata ctcataaaag
    13561 gtaactatta tgtctatgcc attaagcaat gcccttcaga gtcaaattat tacagataat
    13621 cacttccttc atcatccaaa agtcgacaat aagttaacac gtgaatatga atatacacgc
    13681 atggatacgg aaaatatcta tcttctgcct cttactcgtg gaaataacca taattacgat
    13741 ggaaaaagcg ttgtcgaaat tagaaaactt aatattggca aacagtcctg gccatttaat
    13801 tatgcgacag atacatgcag agaattcaat ggtattacaa caacaggacg tatgctctat
    13861 cgaaacttga aaatcacctc agctttagac gaaatatatg gtggcatatg taaaaaggcg
    13921 catgctgcta cagagttagc agaaggttta cggctaaatt tatttatgaa gagccctttc
    13981 gatcctgttg aggactatac agttcatgaa ataacattag gccctggtta caatgttcct
    14041 ggttatgccg gaaccacgat aggatatatt tcaacccttc cagcttctca ggcaaaaaga
    14101 tggaccaatg agcagccaag aattgatatc tatattgatc agataataac tgtctcaggg
    14161 gtggcaaatt cttccggatt cgcccttgcc gcattactta atgctaatat tggaatggga
    14221 aatgacccaa taattggtat agaagcctat cctggtaccg cggagatcca tgcaaaaatg
    14281 ggatataacg ttatccccgg tgatgaagat gcgccactca aacgcatgac tctgcaaccg
    14341 tcatctcttc cagaactgtt tgaattaaaa aatggtgaat ggaattatat tggcaaataa
    14401 ccactgagaa gaatgagtac taacattcag gttatataga tatttaaaca ataccctgca
    14461 atttacaaag taatactcat tgcgacttct taatttaaga aagcgcaagg aacgtttacc
    14521 cttgcgctta tcataatcag tcaggcgtcg actttatcca gcggccatga atcaaacaga
    14581 tagccgtcaa aataaatatc gtcaacgttc gagaattcca gcagacgttg cttaacgttt
    14641 tccagatgct gccacattgc cagcttcgcc gctcgggcat cttttttgat taacgcggca
    14701 aggatctgtt tgtgatcgcc caaccactct ttgcgataca ggctgtcatc cagatggctg
    14761 tgcaactgga tccacattgg attgttttcc cgccactgcc aggactgacg gaataactcc
    14821 accagcatgc tgttatgcgt tgcttcagca atggcgagat ggaactgcat gtcaccgctt
    14881 tcgctgctac ccggcgcgct ggaagccagt tcacgctctt ccagttgcaa tgcctgacgc
    14941 attttgacga tatcttcgcg ggtagcctgc agggcggcaa attccgcgat gttgctctca
    15001 agaagctgtc gcgcctgcaa caattcaaag gggccggcat cattgcagac gttggcatcc
    15061 ggactgtctg tgttgtggct gcctgagcta tcaagaacat agataccggc accccggcgc
    15121 acttccacca gccctttgat ctccagcatg atcagcgctt cacgtaccac cgtccgcgtg
    15181 acatcaagca tttctgcaat ttcacgctcc ggcggcagcc gttcgccagg attgtacggc
    15241 gtctttatga tcagatcgcg gatcatcgcc ccgacttcct ggtaaggtct ttgcgcagag
    15301 gtggcagatt tcatggtgtt gtgtccgtta ggtgcggtta atcaaatttt tgccggatgc
    15361 ggcgtgaacg ccttatccgg cctacaacgg gcaattttac ggcccccgtt aatctcaaac
    15421 tataccatta gcactggaag ttagcacgta caggtgggca aaaaaacgaa aactggtcaa
    15481 ccaaatatca gtttgattga ccagtaagtc tgtagggtaa tcagttagtt acagcgcagc
    15541 cacacactcg cgcgcaccgc gttcgcacag ctgctgatat gccgccgtca ccgcgccaac
    15601 aaagtcggca ttctgcggca gatcatcggc aaaaataccg ctcaggccca gcagcgcttt
    15661 cacgcggtct gcgccctgat actgcgcgtt aatcttctgg aactcggcca gcatcgggtc
    15721 gaccacgtca atggcattac cctgctcatc cacgccctgg gtgtaacgca tccagccagc
    15781 cacgcccagc gccaggtgac gccagctgcc gccattttgc aggtgcagac gcaccgggtc
    15841 cagcagacgc tgcggtaact tctggctgcc gtccatcgca atctgccagg tacggtgacg
    15901 cagagacggg ttgctgaaac gctcgatcag cagcgtcgca taggccttca ggtccgtacc
    15961 ctccggcata gacagcgttg gcgcttgttc ctgcatcatc agggcaaagg ccgctttgcg
    16021 ataatccggg ttagtcatgg tgtcggcaat agtttcatag ccgccgaggt aaccgaggta
    16081 tgccaggaaa gagtggctgc cgttcagcat acgcagcttc atcatttcga acggcacaac
    16141 gtctgcaacg aactgtgcgc ccactttatc ccagtccggg cgaccattaa cgaagttatc
    16201 ttcaatcacc cactgacgga acggttcgca ggcaatggcg cacgggtcgt aaacacccag
    16261 ctggtcagca atttcctgta aggtttctgg cgtcgccgcc ggaacgatgc ggtcaaccat
    16321 ggtgcacggg aaggtgacgt tctcttcaat ccatgccgcc agctgcgggt cacgtgcctg
    16381 agccagcccc agtaccgcga ccttcgccac atgaccgttt tcacgcacgt tatcgcagga
    16441 catcaccgta aatgctttca gccctttttc acgacgcaga cgcaaggctt cgacgatgta
    16501 accaatcgcg gacttcggcg cagtcgggtt ttctagatcg tgcttgatca gcgggttatt
    16561 gagatccagt tgaccgcttg ccgcatcagc gcagtagcct ttttccgtga ccgttagaga
    16621 gacaatcgcc gtttgcggac gcgccatcgc gttgagaata ccttcgcagc cgtcgatttc
    16681 cggatgcagc gcttctttca tcgaaccgat aattttcagc tcggtgcttt ctgcgccttt
    16741 ttccgctacg gtgtacagca gttgctgttt tttcaggttt tcgatcagca cgcggtcgtt
    16801 gcctggcatc aggttaactt cgcagatgcc ccagtcgctg tcggtgcttt ccagcagatg
    16861 atgggtatac agcgcctgat gtgcgcggtg aaacgccccg caaccgagat gcacaatgcg
    16921 tgattccaga cgagaatgat cccatgacgg acgggcaacc ggcagattgc tgtcaacaat
    16981 agtagtcatc gtaaactcca gaatccgtct tcagagagtg acggcaagga agaaggaacc
    17041 ggcacggcgc gcagccatgc cggtggatat taacggctaa agaaagcgcg ctggatcgcc
    17101 agttcgacac cgcgaacttc ggccaggcct ttcagacgac caattgcgga gtaacctggg
    17161 ttggttttct tcttcaggtc gtccagcatc tgatgaccgt ggtccggacg catcgggatc
    17221 aggtcttctt tgccttccgc tttacgacgg tgttcttctt caacaatcgc tttcaccact
    17281 tcgtacatat caacgtcacc gttcaggtgc gccgcttcgt ggaaggtttt cgggttatct
    17341 tcacgcatgg tggagcgcag atgggtgaag taaatacgcg gaccgaactg cttgatcata
    17401 tcaaccagat cgttgtcagc acgcacgccg taggaaccgg tgcacatggt gaaaccgttc
    17461 gccatgctgt ttacggtatc aaccatccac tgcatatctt caatggtgga aacaatgcgc
    17521 ggcaggccga ggatcgggcg cggcggatcg tccgggtgaa ccgccatacg cacgccaact
    17581 tcttcagcaa ctggaataat cgctttcagg aagacggcaa agttttcgcg cagcttcgct
    17641 ttatcgatat ctttgtacag ctccaggtgc ttacggaact ggtcgagggt atacccttct
    17701 tccgcgcccg gcagaccggc aatgatgtta cgcgtcagac gcgctttgtc ttcatcgctc
    17761 atagtggcga agcgttcagc tgcctgagca atttcttctt cggtgtaatc cgcttccgcg
    17821 cctggacgtt tcaggatatg catttcgaat gcagcgaatt cgatctggtc gaagcgcaga
    17881 gctttggagc cgtctggcag cacgtattcg aggtcagtac gggtccagtc gagcaccggc
    17941 atgaagttgt agcacacggt gcgaatgccg cactgcgcca ggttgcgcag agtctgctga
    18001 tagttagcga tccactgctc atagttgcca gtgtgggttt tgatatcttc gtgaattggt
    18061 acgctttcta cgacagacca caccaggcct gcgtcttcaa cgatcgcctt gcgtttgagg
    18121 atctcttcta cggaccatac ttcgccgttc gggatatggt gcagcgcggt aaccacgcca
    18181 gttgcgcccg cctgacggac atcagctaaa gaaaccagat cgtttgggcc gtaccagcgc
    18241 caggtctgtt ccatgatttt tcctctttca catagtgggt tccacagcaa agagacgcgg
    18301 aaccctggag ttgtttaggt atccggatga acaaccagac cgcagccgtg gcgttgcatc
    18361 ggatgagatg gcgtataagt tctacctttt ggtaagatat atcaacccaa atcctgaaat
    18421 tggttaacca aatcacaaga atttcactct catggttgtt gctgcaaatt gcagcaaaag
    18481 gtaatcgatg gttattgatc agaggatgtg acattcatcg caacaatggt tgaccaattt
    18541 acataacatg tcgcccaaaa taacaacggt tcaaccaggt aaggtaaaac gttatgcatg
    18601 tgcttaacat tctctgggta gtattcggca ttggtctgat gctggtactg acaacgaccg
    18661 caggttcaga cacattcact gcattagcaa tgcctcttag attattttga cctgtcagta
    18721 aaagacacgt tgaaaacctg gggtctgctg gaactggtca actccgtggt tgggctgatt
    18781 attagcaagg tagcgtaaaa gaacaccaga gcctgccaat ggcaggctct gactgatgac
    18841 aaagtctaaa aatgtgcccg gacagtcccc tcgcccctcc ggggagaggg ttagggtgag
    18901 gggaacagac cagcaaagtg cgctttgttt atgccagatg cgacgctgac gcgtcttatc
    18961 tggcctacaa agggctaacg tgcaggtttt tagcttcagg taatattgcg taactgcatt
    19021 agcaatgccc tgtgatttct ttattgataa acaaaagtca cgccaataat cgattgcaca
    19081 ttccctgcag tcacctgccc tccggtacgt gcgtaatttg ccgttaatcc cagacttacc
    19141 gccgaagttc cta
//
LOCUS       DAJVUK010000078        18907 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.078, whole genome shotgun sequence.
ACCESSION   DAJVUK010000078 DAJVUK010000000
VERSION     DAJVUK010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18907
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.078"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(32..2479)
                     /gene="glgP"
                     /locus_tag="OQQ57_002439"
     CDS             complement(32..2479)
                     /gene="glgP"
                     /locus_tag="OQQ57_002439"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HCS1957171.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
                     LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="OQQ57_002440"
     CDS             complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="OQQ57_002440"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HCS1957172.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRASLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="OQQ57_002441"
     CDS             complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="OQQ57_002441"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HCS1957173.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLKAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="OQQ57_002442"
     CDS             complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="OQQ57_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HCS1957174.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWDSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="OQQ57_002443"
     CDS             complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="OQQ57_002443"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HCS1957175.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDASISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
     gene            complement(9673..10776)
                     /gene="asd"
                     /locus_tag="OQQ57_002444"
     CDS             complement(9673..10776)
                     /gene="asd"
                     /locus_tag="OQQ57_002444"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCS1957176.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            10968..11561
                     /gene="yhgN"
                     /locus_tag="OQQ57_002445"
     CDS             10968..11561
                     /gene="yhgN"
                     /locus_tag="OQQ57_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HCS1957177.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="OQQ57_002446"
     CDS             complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="OQQ57_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCS1957178.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGPLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="OQQ57_002447"
     CDS             complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="OQQ57_002447"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HCS1957179.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RRNIEKMASGEPLNDDDRKPWLQALNDAAFAMLRTNKVSLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="OQQ57_002448"
     CDS             complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="OQQ57_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HCS1957180.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHCHIAYLGARLDERTIIKQKGYEQAMLDAGLVSYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(14847..15542)
                     /gene="yhhW"
                     /locus_tag="OQQ57_002449"
     CDS             complement(14847..15542)
                     /gene="yhhW"
                     /locus_tag="OQQ57_002449"
                     /EC_number="1.13.11.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004213399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quercetin 2,3-dioxygenase"
                     /protein_id="HCS1957181.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(15665..16702)
                     /locus_tag="OQQ57_002450"
     CDS             complement(15665..16702)
                     /locus_tag="OQQ57_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1957182.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFISDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AQAKELFALAKSKGLSVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
                     PEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE
                     QASPSTVTLAN"
     gene            17034..17522
                     /gene="yhhY"
                     /locus_tag="OQQ57_002451"
     CDS             17034..17522
                     /gene="yhhY"
                     /locus_tag="OQQ57_002451"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1957183.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
     gene            17759..>18907
                     /locus_tag="OQQ57_002452"
     CDS             17759..>18907
                     /locus_tag="OQQ57_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hcp1 family type VI secretion system effector"
                     /protein_id="HCS1957184.1"
                     /translation="MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSL
                     LNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYY
                     YIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFL
                     PNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEK
                     TAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLA
                     NLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGT
                     NDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPP"
BASE COUNT         4824 a         5013 c         4602 g         4468 t
ORIGIN      
        1 ccctttggcc ccgttctatt tattggtgaa cttacaatct caccggatcg atatgccaga
       61 tatgatcggc gtactctttg atagtacggt cagaagagaa gtagcccata ttggcaatgt
      121 tcagcatcgc ttttgcggtc cactcttcct gaagctcgta gagttcgtcg actttatcct
      181 gacaatcgac atagctgcga taatccgcca gaacctgata gtgatcgccg aagttgatca
      241 gcgaatcaac cagatcgcga tagcgacccg gatcttccgg actgaataca ccgctgccga
      301 tttgcgtcag cacctgatgc agctcctcat ctttctcgta gtattcacgc ggtttgtagc
      361 cctgacgacg cagttcttcc acttcttccg ctgtgttacc aaaaataaag atattgtcag
      421 caccgacatg atccagcatc tcgacattcg caccgtccaa cgtaccgata gtcagcgcac
      481 cgttaagcgc aaacttcatg ttactggtgc cggaagcttc cgtccctgcc agcgaaatct
      541 gttcagacag atctgccgcc ggaatgatca actgcgccag gctaacgctg tagttcggga
      601 tgaacacgac tttcagctta tcgccaatct gcggatcgtt gttgatcact ttcgctacgt
      661 cattgatcaa atgaataatg tgcttcgcca tgtaataggc cgaagccgcc ttaccgccaa
      721 aaatattcac gcgcggtacc cacttcgcat ccgggtcggc cttgatgcgg ttatagcggg
      781 taatcacatg caacacattc atcaattgac gtttgtattc gtgaatacgt ttgatttgta
      841 catcgaacaa cgcctttgga ttcaccacca cattcagctg ctgggcgata tactctgcca
      901 gacgcttttt gttctccagc ttcgcctgat gcacagcgtg attaaccatt gggaaatcac
      961 agtgttgttg cagctcatta agcaggctaa ggtcggtgcg ccagttacgg cccaggtgtt
     1021 cgtccagcac ggctgaaagc gatgggttcg ctaccgctag ccagcgacgc ggcgtcacac
     1081 cgttggtgac gttggtgaaa cgacccggga agattttcgc aaagtcggca aacaacgatt
     1141 gcaccatcag attagagtgc agttccgata caccgttaac tttgtggctc acaacaaccg
     1201 ccagccaggc catacgcaca cgacgaccgt tggattcatc aatgatcgac gcccgtccca
     1261 gcagatcggt atcgttcgga tactgttcct gcaaggtttt caggaaatag tcgttgattt
     1321 caaagatgat ctgcaggtga cgcggcagaa ttttacccag catatcaacc ggccaggttt
     1381 ccagcgcctc gctcatcagc gtgtggttag tgtaggagaa gacctgacaa cacacctcaa
     1441 acgcgtcgtc ccagctaaat tggtgctcat cgatcagcag acgcatcatc tcaggaatcg
     1501 acagtaccgg atgggtatca ttgagatgaa tcgcgatttt atccgccagg ttatcgtagg
     1561 ttttatgcaa ctgataatgg cggcttaaaa tgtcctgaat ggtcgaggaa accagaaagt
     1621 attcctgacg caggcgcagc tcacgcccgg agtaggtgga gtcatccgga tacagtacgc
     1681 gagatacgtt ctcggagtgg tttttatctt ccactgccgc gaagtagtca ccttggttga
     1741 atttaccgag gttaatttcg ctactggctt gcgcactcca caaacgcaac gtgttggtcg
     1801 cgtcggtgtc gtaaccaggg attatctgat cgtaagcgac tcccagaatc tcttcggttt
     1861 caatccagcg cgttttttta ccttcctgct gaatgcgacc accaaaacgg actttatagc
     1921 gcgtgttgtg gcgtttgaat tcccacgggt taccgtattc cagccagtag tctggcgact
     1981 ctttctggct accgttaacg atgttctgct tgaacatacc gtagtcatag cggatgccgt
     2041 aaccgcgccc cggcaaccct aacgtcgcca gagaatcaag gaagcaagcc gccagacgtc
     2101 ccaggccacc gttaccgagg cctgggtcat tttcttcatc aatcagctct tcgagattta
     2161 accccatcgc ttccagtgcg ccctgtacat cttcgtaaat tcctagcgac aacatggcgt
     2221 tggagagcgt acggccaatc aaaaactcca tcgacaggta gtaaacctga cgagtttctt
     2281 gcgacaactg ggcacggttt gaacgtaacc agcgctccac gagacgatcg cgcacagcaa
     2341 ataacgttgc gttcagccat tcatgtttat tggcgacgac cgggtccttt ccaatcgtaa
     2401 acatcagctt gtaagcgata gagtgcttaa gagcttctac gctaagcgtg ggcgatgaat
     2461 atgtaaacgg agcattcata taggcgtttc ctgaaaacta tttcaagcga tagtaaagct
     2521 cacggtacga cttcgccgcg acctgccagc taaaatccat tgccatagcc tgacgttgca
     2581 caaaccgcca cagtgaagca cgagaccaca gtacaaaagc acgtcgaata gcccgtaaca
     2641 gcgaccaggc attactatct tcaaagacaa acccactggc gacgccatct gcaaggttct
     2701 caagagaaca gtcagaaacc gtatcagcaa gcccaccggt gcgccgcact aacggcagcg
     2761 taccgtactt caatccataa agttgcgtta agccgcacgg ttcaaaacgg ctgggcacca
     2821 gaatgacgtc cgcgccgccc ataatgcgat gcgaaaatgc ttcgtgatag ccaatctgaa
     2881 cgcccacctg gccggggtat tccgctgccg ccgcaaggaa accttcctgc agcaccggat
     2941 cgcccgcgcc gagtagcgcc agctgcccgc cctgctccag aagacccggt aaggcttcca
     3001 gcaccaggtc gagacctttc tggctggtca gacggctcac cactgcaaaa agcggcactt
     3061 tatcgtcaac cttaagcccc attgcgattt gtaactggcg cttattttcc gctttatctt
     3121 ccaacgtatc gcgggtgtaa cgcgaggcca acagtaagtc cgtctctgga ctccagattt
     3181 tctcgtccac gccgttcagt acgccggaaa gacgcccttc acggtgacgc tgttgcaaca
     3241 gaccttccat accgtaggca aactgcggtt cggtgatctc gcgagcgtag gttggactga
     3301 ccgccgtaat gtgatcggca tagtacagac cggccttcag gaaagagatt tgtccgttga
     3361 attccagccc atgaatatta aagaatgacc atggcaattg gatgtcattc atgtgatgtg
     3421 cataaaacat gccttgatag gccaagttgt gcacagtaaa caccgacttc gccggacgcc
     3481 cgcgcgccgc cagatacgca ggcgcaaggc ctgcatgcca gtcgtgcgca tgcaccacat
     3541 caggacgcca gaatgggtca agcccgctgg ccatttctgc cccaacccac cccagcagcg
     3601 caaaacgcaa tacgttgtcg gtataggcaa ataagttggt atcgtgatac gggcttcccg
     3661 gacgatcata gagatgcggc gcgtcaatca ggtatatgcc aaccccgttg taatgaccga
     3721 acaacagcgt gatatgtccg gcgaaggtat cacgacggga tactacctgc gcatcggtca
     3781 cgccacggcg aatatcggga aatgcaggca acagtacgcg agcgtcaacg ccgtctgcga
     3841 tttgtgctgc gggtaatgcc ccaataacat cagccagacc gccggtttta agcagcggga
     3901 acatctctga acatacatgt aaaacttgca ttatcgctcc tgtttatgcc ctaacttccg
     3961 tagcatttcg cgcgttacca gcacgatgcc ttcttctgaa cgatagaaac gacgtgcatc
     4021 ttcctctgcg ttttcaccaa tcaccatgcc ttccgggata acacaagcac gatcgatgac
     4081 gcagcggcgc agacggcacg agcgacctac ccatacttcc ggtaacaata cggcggaatc
     4141 aatgttgcag aatgaattca cgcgaacgcg cgagaacaga acggactgca ccaccaccga
     4201 accggagatc acacaaccgc cggataccag tgagttaagg gtcatcccgt ggctaccgga
     4261 gcgatcctgc acgaatttcg ctggcggtaa tgattcattg taggtgcgaa ttggccaatt
     4321 gcgatcgtac atatccagtt ccggcaccac agaggccaga tcgagattcg ctttccagta
     4381 agctttcagc gtacccacat cgcgccagta cggctcggca tccgggtcgg attgtacgca
     4441 agagagcggg aacgggtgcg cataggccag accggcttcg gtgatcttgg gaatcaaatc
     4501 tttgccaaag tcgtggctgg agttctcatc acgatcgtct tcttccagca gttcatacag
     4561 atagtcggcg tcaaagacgt agatacccat actcgccaga gatttgctcg gatcgttcgg
     4621 cattgacggt gggttagcag gtttttcaac gaattcgata attttatcgt tctcatcaac
     4681 cgccataacg ccaaatgcgg aggcttcttc aatcggtact ggcatacaag caacggtgca
     4741 acgtgcgcct ttttcgacgt gatcgataag catacgcgag tagtcttgct tgtagatatg
     4801 gtcgcccgcc aggatcacca cgtattccgc tttataacgg cggataatgt cgaggttttg
     4861 ggtgaccgca tctgcggtgc cgcgatacca gttttcccct ttcattctct gctgtgctgg
     4921 cagcagatcg acaaactcgt tcatttcttc attgaagaat gaccagccgc gctgaatgtg
     4981 ctgcaccaga gtgtgggact ggtactgggt gatcacgccc atacgacgga tcccggagtt
     5041 gatgcagtta gacagcgcaa agtcgataat gcggaactta ccgccgaagt gtacggccgg
     5101 ttttgctcgc ttattggtta aatccttcag gcgggtacca cgtcctcccg ccagtatcag
     5161 ggcaacagat ttcaatggca gctggcgcgc caacattaag tgatcgttct tctctaaact
     5221 aaccatgact aactcctttt ttatcatctc tggaacacac acaatccgtg tgcaggtccc
     5281 tgccagacag ccgtaatcac tgggttatcc tctccagcga atgggggaat ggcgtgccac
     5341 tccccagcag gtaaaacaat ctctgttacc tcaagcgtgg cgttaattgc gatcaaaaag
     5401 cgatccgaga gcagaatttg cagctgtttc ggcccgtttt gccactcatc cgtgcttaaa
     5461 ggttgagcat atcgatttag ccaacggaca ttgccatcgc cttcttccca ccagcgattc
     5521 tccaccaaag cgggaatgcg cttgcgcaga tggattaacg cggcggtaaa tgcggttaaa
     5581 ccactgcttg cctgcgacca gtccaaccag gttaattggt tatcctgaca gtaggcattg
     5641 ttattgccat gctggctgtg accatgttcg tcaccggcca gtaacatcgg cgtaccctgg
     5701 gagagcaaca acgttgttaa caaggcgtga atactgtcgc gccgccgttc aaccaggtca
     5761 agagaaccgc ctaacccttc tttaccatga ttgttactgt aattgttgtt ggtcccgtcg
     5821 cgattttctt ctccgtttgc ttcattgtgt ttatggttga agcaaacgca gtcgcgaagc
     5881 gtaaaaccgt catgcgcagt gacgagatta atcgcggcac tcggcagacg accattacgt
     5941 ttaaaaacat cgctggaggc agcaaaacgc ccggcaaacg cccccagagg caaatcataa
     6001 tgtagccaga aacgacgggc agcatcgcgg aaatgatcgt tccactcggc aaacagcggc
     6061 gggaaatttc ccacctgata accaccaggg gcgatatccc acggttcagc aattaacttc
     6121 acctgcgaga gcaccgggca gttctggata gcggtaaaca acggcgcatc ctgacggaac
     6181 tctggcgtac ggcccatgac tgccgccaga tcaaagcgga aaccatcgac gtgacaggtt
     6241 tctacccaat aacgcaggca ggcgctggca taatccacca ccgccggatg actcaaattg
     6301 agcgtgttgc cgcaaccggt ccagttgtga taatcgccgt cttctcttat ccaataatag
     6361 ctacggttat cgatcccacg cagtgagaat aacgggccgt cgaggtccag ttccgcacta
     6421 tggttgagca cgatatcaag aatgacttcg atacccgctt tatgcagtgc tttgattgca
     6481 tcgcgaaact catccagcgc cgtttctggc gagcaggcat acgccggatg cagcgcaaac
     6541 atcgccaccg ggttgtaacc ccagtagtta cttagcccca tgcgttgcag acgtggttca
     6601 ctggcaaact gcgccactgg cagcagttcc agcgcggtaa tgcccaattg tttcaaatag
     6661 ttgatcatca ccggatgccc gagggcttta taagtgccac ggatctcgac cggaatctcc
     6721 gggtgcaagt acgttaatcc tttgacatgg gcttcataaa tgatggtgct gtcccacggc
     6781 gtgcgcggcg gggcatcatc ttcccagtca tagtgatcaa ccaccactac gcatttcggc
     6841 gcaatggcgg cgttgtcgcg atagtcaggt tcattatgac cggcgtgcag cagcgggtta
     6901 tctttaaatt ccccgtcaat ttgccgcgcg caaggatcaa tcaacaactt cgccgggtta
     6961 aagcgatgcc cctcggcggg ttgccagggg ccatgaacgc gataaccata acgcaaaccc
     7021 gggcgcgcat ccggcagata accgtgccaa atgtcgccac tgtgccctgg caagtcatag
     7081 cgatgttcct ggccattggc gtcaaagaca cacagttcta cccgctcggc atgagcggag
     7141 aaaagtgtga agttgacgcc ctgaccgtcg taatgcgcgc cgaggggagc gggtttgcca
     7201 atggcgagtt gtgtcattct gcctcccgaa ccagccagat agtggccagc ggtggtagtg
     7261 tcaggcttag tgaatgctga cgaccgtggc tggcaatctc atcgctgtgt accgtgccgc
     7321 cattgcctgc attactgccg tgatagtgca tggaatcggt attgaggatt tcacgccatt
     7381 tgcctggctg attaatgccg aagcgataat catgacgcgg caccggcgta aagttactgg
     7441 caacgataat ttcgttaccc tctttatcgc gacgcacaaa gatcagcacc gagcgttctt
     7501 tgtcatccac caccagccat tcaaagccgt acgggtcaaa atccagttca tgcattgctt
     7561 tatggtggcg gtaggtgagg ttcagatcgc gcaccagacg ctggacaccg tggtgccagt
     7621 tatcgccacc ttccaacaga tgccagtcga ggctggcgtc atggttccac tcacggccct
     7681 gggcaaattc gttccccatg aacagcagtt tcttgcccgg gaatgcccac atccagccat
     7741 agtaggcgcg caggttagcg aatttctgcc atgcgtcgcc cggcatgcgg tcgagaatcg
     7801 attttttacc gtggaccact tcatcatgcg acaacggcag gacgaagttt tcagtgtagt
     7861 tgtagagaat cccgaaggtg agtttatcgt gatgatactg acgataaacc gggtcgagct
     7921 tcatgtagtc cagggtgtca tgcatccagc cgaggttcca cttgtaccag aagcccagac
     7981 cgcccatatc ctgcggacga gaaacgccag ggaaatcggt agactcctca gccattgtca
     8041 ccgcaccgga aacctgctca ccaagaatac ggttggtatt acgcaagaat tcaatcgctt
     8101 caagattctc gcgcccgcca aattcgttcg ggatccactc cccctcttta cggctgtagt
     8161 cgcgataaat cattgacgcc accgcatcga cgcgcagcgc atcaatacca aaacgttcaa
     8221 tccagtaaag cgcgttaccg acgaggaagt tactgacttc acggcgacca taattgtaga
     8281 tcagcgtatt ccagtcctga tgatagcctt cgcgcggatc gctgtgttca tacaagttcg
     8341 tgccatcaaa ttcggcaagc gcaaagtcat cggtcgggaa gtggcctggc acccagtcga
     8401 gaatcacgtt cagacccgct gcgtgtgcgg catcaatgaa ataacggaag tcgtcgcgag
     8461 taccaaaacg gcgggttggt gcatacaggc cggttggctg ataaccccaa ctgccatcga
     8521 agggatgctc gttaatgggc agtagttcga ggtgggtaaa gcccatccat ttagcataag
     8581 gcaccagttg atcggccagc tcgcggtagc tcaaccagaa attgttatcg gtgtggcgac
     8641 gccaggagcc caggtgaact tcataaatag agattgacgc atcaaactga ttcgcttttt
     8701 tgcgctcttc agtctgtaca accttttccg gcagcccgca aataagagac gcggtttccg
     8761 ggcgcatttg cgcttcgaag gcataagggt cggacttcag acgcaagttg ccattggcat
     8821 caatcatctc gtatttatag agctgaccgt tatgcgcccc agggataaac agttcccaaa
     8881 tgccgctctc tttacgcaga cgcatcgggt gacggcgacc gtcccagtag ttgaattgcc
     8941 caaccaccga gacccgacgg gcgtttggag cccaaacaga gaaacgcgta cctgtgacgc
     9001 catccatagt atctgcatgc gcgcctaagg tttcatacgg gcgcaggtga gtaccttcag
     9061 ataatagcca ggcatccatt tcctggatta gcgggccaaa acggtaagga tcatcaatca
     9121 ggttttgctg accatgccag acaacagcca actgatagcg gaaaaaattc ttacgtcgcg
     9181 gaatgacacc gctaaagaat ccccgtgagt caagacactc cagttttgcg agtttgcgcc
     9241 cggttttcgg ttcaatcacc cacacatcgg tagcgtcggg taaaagggca cggacttcca
     9301 gtcccgcggt ggttttatgc attcccagta cggaaaaagg atccgcaaaa tggcctgcaa
     9361 ttagcgcgtt aatcacgtct ctatcgatac gatcggacat gcttgtcttc ctgttttatt
     9421 gtgtcacccc atccaattgg atttttgact tctggttgtg acattttttt gacctgaacg
     9481 gcgcagcact ctgtgcatcc tctctgcgtc gtcctcactt caggtaaggc tgtgaatact
     9541 catgtattca gccaccctta aagaatagcc aatgctctat ttaactcccg gtaaatcatg
     9601 aaacatctgc gcttactcct gtattacgca ctaacagggg cggcatcgcg ccccagattt
     9661 aatgaataaa gattacgcca gttgacgaag catccgacgc agcggctccg cggcccccca
     9721 cagcagctgg tcacccacgg taaaggctga caggaactcc ggtcccatat tcagcttacg
     9781 caggcggcct accggcgtgg tcagcgtgcc ggtaacggca gctggggtta gctcacgcat
     9841 agtgatttcc cgatcgttcg gaacgacttt cgcccacgga ttgtgcgcag ccagcagttc
     9901 ttcgacggtc ggaatagaca catctttttt caatttaata gtgaatgcct ggctgtggca
     9961 gcgcaatgcc ccgacacgca cacataaacc atctaccgga attacggaag atgtgttgag
    10021 gatcttgttg gtttccgcct gccctttcca ctcttcgcgg ctctgaccgt tatcgagctg
    10081 tttgtcgatc cacggaatca ggctacccgc cagcggcacg ccaaagttat ccaccggcag
    10141 ctcaccgcta cgggttaagg ttgtgacttt gcgttcgata tcgagaatag cagaggacgg
    10201 ggtcgcgagt tcatctgcca catggccata cagatggccc atctgggtta ataactcacg
    10261 catatgtcgc gcaccaccgc cggaagcggc ctggtaggtt gcaacggaca cccaatcaac
    10321 aagatcattg gcgaataaac cacccaacga catcaacatc aggcttacgg tacagttacc
    10381 gccaacaaaa gtcctgatgc cattatttaa tccgtcggta atgacgtcct gattgacggg
    10441 gtcaagaatg atgatggcgt catctttcat gcgcagagac gatgctgcgt caatccagta
    10501 accttgccat ccgctttcac gaagctttgg atagatttcg ttggtataat cgccgccctg
    10561 acaggtcaca atgatatcga gggcctttag cgcctccaga tcaaaggcat cctgaagtgt
    10621 gccagtggtt ccgccaaaag acggcgcagc ctggccaagc tgagaagtag aaaagaagac
    10681 agggcgaatg gcgtcgaagt cgcgctcttc aaccatgcgt tgcatgagaa cggagccgac
    10741 cataccgcgc cagccgataa aaccaacatt tttcataagc gttttttcct gcaaagatgt
    10801 gtgctgtata aatgtgccgg tctcctcttg gcacatcttt caccatacaa aaagcagcca
    10861 aagtcgcaag tgaaattaat caatgatagc gaagccatca gtaatgcgac ttatcctgct
    10921 ttgttagcac acagaaagtc cgcggcaatt atcagggaat ttgagttatg aatgaaatca
    10981 tttctgcagc agttttattg atcctgatta tggatccgct cggaaacctg cctattttca
    11041 tgtccgtact gaaacatact gaaccgaaaa gacggcgggc aatcatggtg cgagagttgc
    11101 ttattgctct cctggtgatg ctggtgttcc tgtttgcggg tgagaaaatt ctggcatttc
    11161 tcagcctgcg agcagaaacc gtctccattt ctggcggcat cattctgttt ctaatcgcca
    11221 ttaagatgat tttccccagc gcttcaggaa atagcagcgg gcttccggca ggtgaagagc
    11281 catttatcgt gccgttggca attccgttag tcgccgggcc gactattctc gccacgctga
    11341 tgttgttgtc tcatcagtac ccgaatcaga tgggacatct ggtgattgct ctgctgctgg
    11401 cctggggcgg cacctttgtc atcctgctac agtcttcgct atttttacgt ctgctgggcg
    11461 agaaaggggt gaacgcactt gaacgcctga tgggattgat tctggtgatg atggcaaccc
    11521 agatgttcct cgacggcatt cgaatgtgga tgaaggggta acgaggagag tttttcgaaa
    11581 agaacccggt agcgtcacaa ctaccgggcg aacaaactta actcaacagc tggaacgcaa
    11641 tcatcccaac gatggcacca acagtgccga ggatggtttc catcatggtc caggttttca
    11701 gcgtttcggc ttcggtcgcg ccggtaaatt taccgaacaa ccagaaaccg gcgtcgttaa
    11761 cgtggctgac aacaatcgaa ccaccagcga tacaaatcga cagtgccgcc atttgcgcac
    11821 cggagtagtt cagttgttca atgaccggca tcaccagccc caccgccgtt aaacaggcaa
    11881 cggtggcaga cccctgaatg atgcgcactg cagcggccag cacgaagcag gtgatagcaa
    11941 tcggcaggcc catgccggtt aacgcttcgc ccagtgccgg acctacgcca gagtcaacca
    12001 gcacctgttt gaacacgccg cctgcaccaa tcaccagcag aatgatcccc gccggttgta
    12061 gcgcgtgacc gcaaatctcc atcactttgt cttttggcat gccctgacgc attgccaggc
    12121 cataaatcgc taccagacaa gcaaccagaa tcgcggtaaa tggatgacca ataaactcga
    12181 accattcgta agcagttgat ccttctggca caaaacgagc ggcaatggtt ttcagcccca
    12241 ccagcaccag cggcaacagg atcagcgaca ggctgaatcc gaaggacggc attttgcctt
    12301 cgccgagatg cggttcgctg atgtcgtcag gaatatgcaa ctccacgtaa cggctgatga
    12361 aattacccca cagcggcccg gcaataatca ttcccggaat tgccgcacac agaccaatca
    12421 ggatcatcca gccaaagtcg gcattcatct gcgatgccag caacatcggc gctggtccag
    12481 gcaccagaaa tgccgccgct gccgccacgc ctgcgaataa tgggattacc agcttcacca
    12541 ggttcgtacc ggtgtggcgc gccattgaga aagcaacgct aatcagcaga actatcgcca
    12601 cttcaaagaa cagcggtagc gcacagacca accccgcaag gccgatggca taatgcgcgc
    12661 ggctgtgacc gaaggatttg agcattttga cggcaatctg atcgactgcg ccggtttcat
    12721 gtaagatctt gccaaacata gctcccaggg cgacaaccac cgccaggaag ccgagggggc
    12781 ctcccatccc tttttccatc gtcgctgcga ttttatcgag cggcataccg gaaaaaaggc
    12841 cagcccccat ggacaccacc atcaaagcca ggaaagcgtg catacgcgcc ttcatgacta
    12901 aaaacagcag cagtaaaaca gaccctactg ctgttaaaac aagcgttaat gtagtcacta
    12961 cttatttgcc ttttttaata acctcaatgg tgcttgccac aacaccttcc agcggttgat
    13021 cgatatccac caccagtaca tcggtttcgt ccgcacccgg ctcctgcagc gtttcaaact
    13081 gcgtcaccaa catttgggtt ttaaagaaat ggcctttgcg cgctttcaag cgactttcaa
    13141 tcacatcaaa atcgcctttc aggtagatga aagagagatt cggattacct tcacgcagca
    13201 agtcgcgata gtgctttttc agtgcagaac agacgatcag cgacacttta ttggtgcgca
    13261 gcatagcaaa cgcggcgtcg ttcagcgcct gcaaccaggg tttgcgatcg tcgtcattca
    13321 gcggttcgcc agacgccatt ttttcgatat tgcgccgtgg atggaggaaa tcaccatcaa
    13381 gaaacgcggc atgaagttga tgcgccactt cactggcgac cgcagatttg ccgctgcccg
    13441 atacgcccat caagacgtaa atgtggtgat catggttagt cgtgctcaaa gtggtgcccc
    13501 cacaatacaa gaattaaaaa tgttacgggt aactgttatc ggtaacattg tccagccgga
    13561 caatatcaga agcaatatcc atccgtgcct taagtgtata agtgtgagct acttcaaatt
    13621 tgtaggctta aatagatccg cccggtgaca aggtgaaacc taaatctaac attttcggtg
    13681 tcacagattc gccacgaata cgcgccagca ggcgttcagc gccaatactg cccatccgct
    13741 cacgcggcgt cagcacgctc gctaaccgcg gctccatcac ctggccaatg tcatgaccgt
    13801 ggaaaccggc aatcgccata tcgtcaggaa ccttcaatcc cagacgctga cattcaaacg
    13861 ccgcgccgac cgccaggtca tcgttggtac agaacacgcc atccagctgc ggatattccc
    13921 gccgcgcctg gcgaatcagt tcaataccgg aagagtaaga agaagattgc tcaaccatca
    13981 cgctatacga caccagacct gcatccagca tcgcctgttc gtatcccttc tgtttgatga
    14041 tagtacgttc gtcgagacgc gcgccgagat aggcaatgtg gcaatgcccg cgagcaataa
    14101 tggcggtggt catctggcgt gccgcttcaa agttatcaaa accgacggcg atatcgaggc
    14161 acggcgactg gctgtccatg agttccacca ccgggatccc cgccacttca atcatcttta
    14221 aggtgcgcgg cgtgtgggta cgttcggtga ggatcagtcc gtcgatattc catgagagca
    14281 tggattcgag acgttcttgc tccatttccg gtttataacc gtagtgagcc agcatggtct
    14341 gataaccgtg cgcgtcggtg acgctttcga ttccgcgtaa tacttccgcg aaaacctggt
    14401 tggtgagaga aggtaacagg acgccaatcg cccggctggt ggcgttagag aggatatcgg
    14461 gcgcacgatt gggaatatag cccagttcat caagagcggc ggcaatcttg ccgcgtagag
    14521 cgacggaaac ctgctccggg ttgcgtaaaa aacggctgac cgtcattttg gtcacgccta
    14581 cacggtcagc cacatcctga agtacgggtc ttttcttttt catcgtcctg aaggtacaaa
    14641 agagatagat tctcttagtt taacacggac gcatcagaac cttcccgggg aaaacagtgc
    14701 ttgtttacaa ttattagata tacactaaat caattgcatc gcattgtgct aacgacgcgg
    14761 caaaaccccg gaagcgtgca tcagcacgcg accggagcga gcgaggaagc ctgcaaaaag
    14821 gcaggcttca aagatgccgt tgagttttaa accggcggca gatcgaacag taacacttcg
    14881 ctgtcgctat ccgcatggat ggagattgcc tgctcatccc agattgccag accatcgctg
    14941 gtcgaggctt tcacgccgtt aatggtgaca ttgcctttca ccacctggat ccagacgcgg
    15001 cgttcagcgg caatctgatg caccgactgc tcatctttca gcaacgccca gcggtacagt
    15061 tccatatcct gatgcacttt caatgaacca tctcgcgcat ccggcgagag caccagctgt
    15121 ttgccctgta cggcatcgaa gcgacgctgt tcataacgcg gcgtaatacc gttttcttca
    15181 ggcatgatcc agatctgata cagatgcaga cgctcggtgc tgcttgggtt gtactctgag
    15241 tgacgaatac ccgtacccgc actcataatc tggaactcac ccgccggaac ctgctcttta
    15301 ttgcccatgc tgtcctgatg ctcaacagta ccttccagca cgtaggtcaa aatttccata
    15361 tctttatgcg ggtgagtgcc gaagccctgc cctgcttcaa tcacgtcgtc gttaatcacg
    15421 cgcagcgcgg agaagcccat aaagttcgga tcgtaatagt tggcaaaaga gaaagtatgc
    15481 caggagtcca gccagccatg atttgcatga ccacgttcat ttgctttgcg taagtagatc
    15541 atttgtattc gccccctgaa tgatttcgat gggcttagtg tggacccgat ctgcctggga
    15601 tgatagaggg tgaaaattgc cccctctgtt caaaaaaatt gaactattcg aggggccatc
    15661 aaacttaatt cgcgagagtc actgtggagg gagaggcttg ctcaaatccg cgttcaagga
    15721 tttccagatt ggtaagaact tcagattcct tgacgtaatt tggcgcaccg tgggtgatgg
    15781 tttgatacaa cgcatcataa acgcgcccgt aatcgcccat ctccggcttc atctcttctc
    15841 tgaccgtcac gccctcgtca ttgacatact ccggcacacc gaccgaatca tccgctgcga
    15901 atcccggttc gcccggcata atattagcct tcaggctggt ttcctgctgg tcgataccgt
    15961 atttaataaa cgaacctttc ttaccgtgaa cgataaattt cggataatcg attttcacca
    16021 gatggctggt tttgacgatg gctttcaggt cgccataaaa cagttgcgct tcaaaggtgt
    16081 cgtcaggatt ggctttatta cgcaggctgc ggatgtcata agcgacgtga tccgggcgac
    16141 cgaacagaga aataatctgg tccatcgtat gcacaccaag gccataaaac gcgccatcct
    16201 gcggcagccc aggtttggtt tctgccaccg ggcggtaata gtcaaaatgg ctttccactt
    16261 caacaatctc tcccaacttg ccactttcaa tcgctttttt cgctgtcagg aagcaggagt
    16321 caaagcgacg attctgatac ggcgtgacgc tcagcccttt gcttttcgcc aacgcaaaca
    16381 gctccttcgc ctgggcaagc gtcggggtga acggtttttc gaccagcaca tttttcccgg
    16441 cttccagcgc gcgtttcgcg tactcgaaat ggctgtccgc gtgggtgcag acaacaacca
    16501 gcttaacatc gggatcgttt agtacttcgt cgagatcgct gatgaaatgg atatgggaat
    16561 aaatgggagc ctgttcttcc ggcttcgcat ggcgacgaaa aatatgcgcg acatgccagc
    16621 tatccttgcg gttaagtaca tacggcagat ggtaacgggt ggtgcttttg ccgaagccaa
    16681 taaaggcgca gttgatgacc atgatttcgt cctttttaag gtggttattt acaccttagc
    16741 gcaaagcgga cgtggttcct actggagtgc gcataacgaa cacaagcact cccgtggata
    16801 aattgagaac gaaagatcaa aaaaaagcca gcacccggct ggctaagtaa tactggaagc
    16861 aatgtgagca atgtcgtgct ttcaggttct ccgcgagggt cttcctgatc gcgagacaat
    16921 aataatcatt ctcattcgca cttgtccaac actttttgca aaaaaatgca tttgactcgc
    16981 atttgaaagt caatgatgtt gaaagggaca tttaccccaa agaggacaaa ggaatgagtg
    17041 agatagtaat acgccacgca gaaacacggg attacgaggc catcaggcag attcacgccc
    17101 agccggaggt gtattgcaac acactacagg tgcctcatcc ttccgatcat atgtggcagg
    17161 agcgactcgc cgatcgtccc ggcatcaagc aactcgtcgc ctgtattgat ggagacgtcg
    17221 tgggccatct caccattgac gtgcaacagc gcccacgccg cagtcatgtt gccgattttg
    17281 gtatctgtgt cgactctcgt tggaagaacc gcggcgtcgc cagcgccctg atgcgagaga
    17341 tgattgaaat gtgcgacaac tggttgcggg tagatcgcat tgaactaacc gtgtttgtcg
    17401 ataacgcccc ggcaattaag gtctataaaa aatacggctt tgaaattgaa gggactggta
    17461 agaagtacgc attgcgtaat ggtgaatatg tcgatgcata ttatatggcg cgggtgaagt
    17521 aagatagtgc cctttttctg agatggaaaa agggtgtcat tcaaaatcga cataccttcc
    17581 tttaaggtat ttatttaccc aatacatata ttgagattta actcataatt acttcctaaa
    17641 gtgtaatatt ttatttttta atatatacgc ctacaatttc ctggagtaaa taaataacaa
    17701 ttaacaagca taatattgcc attgataaaa tagcatgcca taaaaggact tttcagggat
    17761 gagtaatatt gtttacctga cagtaacggg agaacaacaa ggaagcatct ccgcaggttg
    17821 tgggacttct gagtctacag gtaatcgttg gcagagcggg catgaggatg aaatatttac
    17881 attctcactc ttaaataata ttaataatac ggggcttggt tcacagttcc atggtataac
    17941 attttgtaaa ttaattgata aaagcactcc attatttatt aattccatta acaataatga
    18001 acaattattt atgggatttg acttctatcg aataaataga tttggtagat tggaaaagta
    18061 ttattatata caactaagag gcgctttttt atcggctatt catcaccaga tcattgaaaa
    18121 ccaactggat acagaaacaa taactattag ttatgaattt atcctctgtc aacatcttat
    18181 cgcaaatacc gagttcagct atttggcact ccctgaaaat tataaccgat tgtttttacc
    18241 aaattcaaaa aaccaaacaa ataatcgttt caaaacgtta aacagcaaag ctattggcag
    18301 gctacttgct gctggtggcg tatacaatgg gaacattgaa ggattcagag atactgcgga
    18361 aaaactgggt ggagatgcaa taaaaggcta tgatcaaata ctaaatgaaa aaacagcggg
    18421 catagcgata gcaacagcat ctattctttt aacaaagcgt tctaatgttg atacatatac
    18481 agaaataaat agttacttag gcaaacttag aggtcaacaa aaacttcttg atggtataga
    18541 cataatagaa ataatataca ttaagagacc ttcaaaagac ttagctaact tacgaaagga
    18601 gtttaataaa actgtaagaa aaaattttct tatcaaactt gcaaaaacct ccgaagcatc
    18661 tggaagattc aacgccgaag accttttaag aatgagaaag ggcaatgttc ctctaaatta
    18721 taatgttcac cataaactat ctctagatga tggtggtact aatgatttcg aaaatttagt
    18781 attaatcgaa aacgaaccat atcataaagt ttttactaac atgcaatcac gaatagctaa
    18841 gggaatatta gtaggtgaaa gcaaaatcac tccctgggcc attccatctg gctcaattta
    18901 tcctccc
//
LOCUS       DAJVUK010000079        18496 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.079, whole genome shotgun sequence.
ACCESSION   DAJVUK010000079 DAJVUK010000000
VERSION     DAJVUK010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18496
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.079"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..891
                     /locus_tag="OQQ57_002453"
     CDS             <1..891
                     /locus_tag="OQQ57_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1957185.1"
                     /translation="WFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFIT
                     IGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTM
                     WGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMTAIPFLFGAAGMLVNGYVT
                     DWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTS
                     CRGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTA
                     AGALAYIFLVRQPINDPRKD"
     gene            complement(940..2595)
                     /gene="tsr"
                     /locus_tag="OQQ57_002454"
     CDS             complement(940..2595)
                     /gene="tsr"
                     /locus_tag="OQQ57_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HCS1957186.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRL
                     TEAVAVFRIQQQQRETSAVVKTVTPAAPRKMAVADSEENWETF"
     gene            complement(2714..3160)
                     /gene="hpaR"
                     /locus_tag="OQQ57_002455"
     CDS             complement(2714..3160)
                     /gene="hpaR"
                     /locus_tag="OQQ57_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HCS1957187.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE"
     gene            3432..4721
                     /locus_tag="OQQ57_002456"
     CDS             3432..4721
                     /locus_tag="OQQ57_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
                     /protein_id="HCS1957188.1"
                     /translation="MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNT
                     VIGCGEPIPFPQGEKVLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESF
                     YRPAIKAKCRDGFCPIGETVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSAL
                     SEFATLNPGDAILLGTPQARVEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTQ
                     PHPHGTLFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYE
                     AELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPML
                     STIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIA
                     TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEDTAK"
     gene            4718..6177
                     /gene="hpaE"
                     /locus_tag="OQQ57_002457"
                     /pseudo
     CDS             4718..6177
                     /gene="hpaE"
                     /locus_tag="OQQ57_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
     gene            6179..7030
                     /gene="hpaD"
                     /locus_tag="OQQ57_002458"
     CDS             6179..7030
                     /gene="hpaD"
                     /locus_tag="OQQ57_002458"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HCS1957189.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVN
                     AVFPLPA"
     gene            7040..7420
                     /locus_tag="OQQ57_002459"
     CDS             7040..7420
                     /locus_tag="OQQ57_002459"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HCS1957190.1"
                     /translation="MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRV
                     HWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLA
                     LSFEIEELHPTLNFKQNNVHALFK"
     gene            7531..8334
                     /gene="hpaH"
                     /locus_tag="OQQ57_002460"
     CDS             7531..8334
                     /gene="hpaH"
                     /locus_tag="OQQ57_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HCS1957191.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            8345..9133
                     /gene="hpaI"
                     /locus_tag="OQQ57_002461"
     CDS             8345..9133
                     /gene="hpaI"
                     /locus_tag="OQQ57_002461"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HCS1957192.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLSDGE
                     HAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVHATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATAVKPGVY"
     gene            9308..10684
                     /gene="hpaX"
                     /locus_tag="OQQ57_002462"
     CDS             9308..10684
                     /gene="hpaX"
                     /locus_tag="OQQ57_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HCS1957193.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPFMIGWLKDLTGSFNSGLWFVAALLVIGAGIIWAIPMQ
                     SSRPRATP"
     gene            10694..11580
                     /gene="hpaA"
                     /locus_tag="OQQ57_002463"
                     /pseudo
     CDS             10694..11580
                     /gene="hpaA"
                     /locus_tag="OQQ57_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
     gene            11831..13393
                     /gene="hpaB"
                     /locus_tag="OQQ57_002464"
     CDS             11831..13393
                     /gene="hpaB"
                     /locus_tag="OQQ57_002464"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HCS1957194.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSANDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQHIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            13411..13923
                     /locus_tag="OQQ57_002465"
     CDS             13411..13923
                     /locus_tag="OQQ57_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HCS1957195.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            14316..16466
                     /gene="btsT"
                     /locus_tag="OQQ57_002466"
     CDS             14316..16466
                     /gene="btsT"
                     /locus_tag="OQQ57_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HCS1957196.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            16597..16800
                     /locus_tag="OQQ57_002467"
     CDS             16597..16800
                     /locus_tag="OQQ57_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HCS1957197.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            16811..17767
                     /gene="yjiA"
                     /locus_tag="OQQ57_002468"
     CDS             16811..17767
                     /gene="yjiA"
                     /locus_tag="OQQ57_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HCS1957198.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPGPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DVAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDEKPHSTMVFIGIQLPEDEIRAAFAGLKK"
     gene            complement(17869..>18496)
                     /locus_tag="OQQ57_002469"
     CDS             complement(17869..>18496)
                     /locus_tag="OQQ57_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HCS1957199.1"
                     /translation="PGSAILNVWLTSMLKRTVVAAVPMPFDKWYSASGYETTQDGPTG
                     SLNISVGAKILYEAVQGDKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKRYGNNVS
                     NWKTPAMALTFRANNFFDVPQAAAEETRHQAEYQNRGTENDMIVFSPTTSDRPVLAWD
                     VVAPGQSGFIAPDGTVDQHYEDQLKMYENFGRKSLWLTKQDVEAHKES"
BASE COUNT         4226 a         5120 c         4934 g         4216 t
ORIGIN      
        1 tggttcaaca tcaaagagcg cggacgcccg atgggcttct tcaacgcagc ttctaccatt
       61 ggcgttgccg taagcccacc gattctggcg gcgatgatgc tggtgatggg ctggcgcggg
      121 atgtttatta ccattggtgt actggggatt tttctcgcca tcggctggta tatgctctat
      181 cgcaaccgcg agcacgtaga actgactgcc gttgagcaag cttatctcaa tgcaggtagc
      241 gtcaatgccc gccgagatcc gctcagtttt gccgaatggc gcagcctgtt ccgtaaccgt
      301 acaatgtggg gaatgatgct cggattcagt ggcatcaact acactgcgtg gctgtatctg
      361 gcctggcttc ctggttacct gcaaacagcc tataacctgg atttaaaaag cacagggttg
      421 atgacggcta tccctttcct gtttggggct gccgggatgc tggtcaacgg ttacgttacc
      481 gactggctgg tcaaaggggg aatggctccg attaaaagcc gtaagatctg cattattgcc
      541 gggatgttct gttctgccgc ctttacgctg atagtaccac aagcgacaac atccatgacg
      601 gcggttctgc tgattggcat ggcactgttc tgtattcact ttgccggaac atcctgccgg
      661 ggcttgatcc acgtcgcagt tgcttctcgc atgactgcgt cggtgggcag tatccagaac
      721 tttgccagct tcatctgcgc ctcttttgcg ccgatcatta ctggttttat tgttgatacc
      781 acccactcat tccgtctggc actaatcatc tgcggttgcg tcaccgcagc gggggcactg
      841 gcgtacatct tcctggttcg tcagccgatc aacgacccac gtaaagatta atctccttat
      901 gcccgataac attttgctta tcgggcattt tcatggcgat taaaatgttt cccagttctc
      961 ctcgctatct gccacggcca ttttacgcgg cgcagctggc gtcacggttt ttaccacagc
     1021 cgatgtttca cgctgctgtt gctgaatccg gaacactgcc actgcttcgg tcaggcgact
     1081 ggcctgctct tccagcgcgg cggcggcagc ggcagactct tccaccagcg cggcgttctg
     1141 ttgagttacc cggtccatct cagcaaccgc taagccaacc tgatcgatac cacggctctg
     1201 ctcatcagaa gcagaagcaa tttcgcccat aatgtccgtc acgcgggtca cggcgctgac
     1261 aatctccgcc attgtttccc cggcgctttc gaccagcgta gagccaacat ccactttccc
     1321 caccgagtct tcaatcaggc ttttaatttc acgagccgcc tgggcgctgc gctgggccag
     1381 attacgcact tctcccgcga ccaccgcaaa accgcgccct tgctcacccg cacgcgcagc
     1441 ctcaaccgcc gcgttcaaag ccagaatatt ggtctggaag gcaatgccgt caattacgct
     1501 gataatatcg gcgattttct gcgaactggt ggagatatcg cgcatagtct gtaccacgtt
     1561 atctaccact ttgccgccgc gttgcgccgt ttcagaagca cttaacgcca gatggctggc
     1621 ctggcgcgca ttttcggcgt tctgcttcac cgttgcggtc agttgctcca tgctggctgc
     1681 cgtctcttcc agcgaagcgg cctgttgctc ggtgcgcgaa gagagatcgt tattgccggt
     1741 ggcgatttcg ctggcaccgc tatagatggc attggccccg ttgcgcacat caccgacggt
     1801 acgcatcagc tctccctgca tatggcgcaa actctctgcc agttgcccca tctcattaga
     1861 gccatccacc tcaatcggtt tcaccagatc gccgcctgca atatgacgaa tgctgtcaat
     1921 caggcgattc attggcgcta ccagcgaggc tttaataccg aaccagacgg cgaagatgac
     1981 cgccagtacg acgatcatca cgcccaccag aatccacatc gcctggctgt aggaggcatt
     2041 gttatcgctg acggcgatat catagagccg atcgttttgc tccatgtaag ccacatactg
     2101 cttctcgaaa ccgtcctgat atccctgggt cggctgatca aagaactcgt tgattttgcc
     2161 tgcacctaac agttggatca gctccgccag cgcattgtga taaatatcgt aattacgttt
     2221 gatctctgcc gctgcggcgg tgctctgacg cgggtcacgc ggcaacgctt cgtaatccgc
     2281 ccagtttttt tccgcctgtt tcagcgaaat actggcactc tgcatcagct cagcaacggt
     2341 tgaaccgcta ccaatattat tctgatccat catgtagcgg atacccgcgc ggttgagggt
     2401 gttacgcgtc tgcaacaacg cgacccagct gccattcagc gtggattgct gctggcgaat
     2461 ggtttgtaaa acagtgaaat tttctttgtc attctttaag gcattaaaga acagaccgcc
     2521 tgatgtcagt tgtaaaaggc caaaaacggc caaaaccagc agtaagctgg tcacgatctt
     2581 gatacgtttt aacatggttt ctctttcctg tggaccgatg caagattttc ggcttggaaa
     2641 gcaaaaactt tatgaaaagg tgtaacccgc catccatgga aaaaccaggc gctggttatc
     2701 agatactaaa aagttattca ttatcgcccg ggatggcttc ttgtcgggaa ttgcccagag
     2761 caataaattc ctctaacaga tgggttaact gttgcatttt ctcggcagta aactgagctt
     2821 caatctgccg ataggcttct tcaatctgtg tctgagcgcg gttatacagc gcctgcccct
     2881 ctttggttag cgagatatag agcttccgct gatcattgat cggctttaat cgcaacacta
     2941 aaccgtcgcg ttccatccgc gtgagaatcc cggtcaggct tgggcgcaaa atgcaggcgc
     3001 gatacgccag atcgtgaaaa tccattgatg ggctttccgc cagaatacgc acgatgcgcc
     3061 actgttgctc agtcaaatta tgccgtttaa cgattgggcg aaaataactc atcgccgctt
     3121 ctcgcgcctg gagcaacgca atggttagtg agtcgtgcat tatctttccc ctgaaaaatt
     3181 caaaatcatt aatatagaaa cagttaatcg tcacgttacc gggactgcgc tgcccctgca
     3241 attcctgatt ttatcaaaat tgatgatatt ttattaactt actgatattt aatattttat
     3301 tatctttaaa tgtaaatagt ttgttaatta gatcacattt acatcactta cttttgccaa
     3361 actacgcaat cgggaataaa agcaatcatt aacatattaa tgattaagat aatcgaatcc
     3421 gaggagtggt aatgaaaggc actatcttcg ccgtagcgtt gaaccatcgc agccaacttg
     3481 atgcatggca ggaagcgttc cagcaatccc cctacaaagc cccgcctaaa actgcggtct
     3541 ggtttattaa accgcgcaat acggtgattg gttgcggtga accgattccc tttccacagg
     3601 gtgaaaaggt actgagcggt gcgactgttg cgctgattgt gggaaaaacg gcgacgaaag
     3661 tacgtgaaga agatgcggca gagtacatcg ccggatatgc gctggctaac gacgtcagcc
     3721 tgccggaaga gagcttttac cgcccggcaa tcaaagcaaa atgtcgtgat ggattctgcc
     3781 ccattggcga aaccgtggct ctcagcaatg tcgataatct gaccatctat accgagatca
     3841 acgggcgtcc tgccgatcac tggaataccg ccgatttaca acgtaacgcc gcgcagttgc
     3901 tgagcgccct gagcgaattt gccacgctga atccaggcga cgccattctg ctcggcacgc
     3961 cacaggcgcg cgtggaaata cagccaggcg atcgcgttcg tgttctcgca gaaggtttcc
     4021 cgccgctgga aaatccggta gtggacgaac gtgaagtgac cacgcgcaag agcttcccaa
     4081 cgcagccaca cccgcacggc acgctgtttg ccctcggcct gaactacgcc gaccacgcca
     4141 gcgaactgga atttaagcca ccggaagaac cgctggtatt cctgaaagcg ccaaataccc
     4201 tcactggcga taaccagacc tccgtgcgtc caaacaatat tgaatacatg cactatgaag
     4261 cggagctggt ggtagttatt ggcaaacagg cgcgtaacgt cagcgaagcc gatgccatgg
     4321 attatgtcgc gggctacacc gtgtgtaacg actacgccat tcgtgactat ctggaaaact
     4381 actaccgccc taacctgcgg gtaaaaagcc gcgacggact gacgccgatg ctttcaacca
     4441 tcgtgccgaa agaggcgatc ccggacccgc ataatctgac ccttcgcacc ttcgtcaacg
     4501 gcgagttacg ccagcaaggc accaccgccg atctgatctt cagcgtgccc ttcctgatcg
     4561 cctacttaag tgaatttatg accctgaatc cgggcgacat gatcgccacc ggcacaccca
     4621 aaggcttatc tgacgtggtg cctggcgatg aagtagtggt ggaagtagaa ggcgtgggcc
     4681 gcctggtgaa ccgaattgtg agtgaggata cagcgaaatg aaaaaagtaa atcattggat
     4741 caacggcaaa aatgttgcag gtaacgacta cttccagacc accaatccgg caacgggtga
     4801 agtgctggcg gatgtggcct ctggcggtga agcggagatc aatcaggcgg tagcggcagc
     4861 gaaagaggcg ttcccgaaat gggccaatct gccgatgaaa gagcgtgcgc gcctgatgcg
     4921 ccgtctgggc gatctgatcg accagaacgt gccagagatc gccgcgatgg aaaccgcgga
     4981 caccggcctg ccgatccatc agaccaaaaa tgtgttgatc ccacgcgctt cccacaactt
     5041 tgaatttttc gcggaagtct gccagcagat gaacggcaag acctatccgg ttgacgacaa
     5101 gatgctcaac tacacgctgg tgcagccggt gggcgtttgt gcgctggtat cgccgtggaa
     5161 cgtaccgttt atgaccgcca catggaaggt cgcgccgtgt ctggcgctgg gcaataccgc
     5221 ggtactgaaa atgtcggaac tctccccgct gaccgcctgg gtgagctggc gctggaagcc
     5281 ggtattccgg caggcgtgct gaacgtggta cagggctacg gcgcaaccgc aggggatgcg
     5341 ctggttcgtg atcatgacgt acgtgccgtg tcgttcaccg gcggtacggc caccgggcgc
     5401 aacatcatga aaaacgccgg gctgaaaaaa tactccatgg aactgggcgg taaatcgccg
     5461 gtgctgattt ttgaagatgc cgatattgaa cgcgcgctgg acgccgccct gttcaccatc
     5521 ttctcgatca acggcgaacg ctgcaccgcc ggttcacgca tctttattca gcaaagcatc
     5581 tacccggaat tcgttaaacg ctttgccgaa cgcgccaacc gtctgcgcgt cggcgatccg
     5641 aacgatccga atacccaggt tggcgcgctt atcagccagc agcactggga aaaagtctcc
     5701 ggctatatcc gtctcggcat tgaagaaggc gccaccctgc tggcgggcgg cccggataaa
     5761 ccgtctgacc tgcctgcaca cctgaaaggc ggcaacttcc tgcgcccaac ggtgctggca
     5821 gacgttgata accgtatgcg agtcgcccaa gaagagattt tcgggccggt cgcctgcctg
     5881 ctgccgttta aagacgaagc tgaaggctta cgcctggcaa acgacgtgga gtacggcctc
     5941 gcgtcgtaca tctggacaca ggatgtcagc aaagtgttac gcctggcgcg tggcattgaa
     6001 gctggcatgg tgttcgtcaa cacccagaac gtgcgtgacc tgcgccagcc atttggcggc
     6061 gtaaaagcct ccggcaccgg gcgtgaaggc ggtgagtaca gcttcgaagt gttcgcggaa
     6121 atgaagaacg tctgcatttc catgggcgac catccaattc cgaaatgggg agtctgatat
     6181 gggtaagtta gcgttagccg ccaagatcac gcacgtaccg tcgatgtatc tctctgaact
     6241 gccagggaaa aaccacggtt gccgccaggg cgcgatcgac gggcataaag agatcagcaa
     6301 gcgttgccgg gaaatgggcg tcgataccat tatcgttttc gatacccact ggctggtcaa
     6361 cagtgcttat cacatcaact gtgcagacca ttttgaaggc gtctacacca gcaacgagct
     6421 gccgcatttt atccgcgata tgacctacaa ctacgagggc aacccggagt tggggcagct
     6481 tattgccgat gaagccttaa agctcggcgt gcgggcaaaa gcgcacaaca ttcccagcct
     6541 gaaactggaa tacggcacgc tggtgccgat gcgctacatg aatgaagaca agcacttcaa
     6601 agtggtctcc atttcggctt tctgcacggt tcacgatttt gccgacagcc gcaagctggg
     6661 cgaagcgatt ctgaaagcga tcgaacagta cgacggcacc gtggcggtcc ttgccagcgg
     6721 ttcgttatcg caccgcttta ttgacgatca gcgtgcagaa gaagggatga acagctacac
     6781 ccgcgagttc gaccgccaga tggacgagcg cgtggtgaag ttgtggcgcg aaggccagtt
     6841 caaagagttc tgcaatatgc tgccggagta cgccgactac tgctacggcg aaggcaatat
     6901 gcacgacacg gtgatgctgc tggggatgct cggctgggat aaatacgacg gcaaggtgga
     6961 gtttatcacc gagctattcc caagctctgg caccggtcag gttaacgctg ttttcccgct
     7021 tcccgcgtaa ggacgtttta tgccgcactt tatcgttgaa tgcagtgaca acatccgcga
     7081 agaagccgac ctgccggggt tgttcgccaa agtgaatccg acgctggcag ccacgggtat
     7141 ttttccgctg gcgggtattc gcagccgcgt gcattgggtc gatacctggc agatggccga
     7201 cgggcagcgt gattatgcct tcgtgcatat gacgttgaaa atcggcgcag gtcgcagcct
     7261 ggaaagccgt cagcaggcgg gtgaaatgct gtttgaactg attaaaacgc acttcgccgc
     7321 cctgatggag agccgcctgc tggcgttgtc gtttgagatt gaagagctgc atccgacgct
     7381 gaattttaaa caaaacaacg tgcacgcatt gtttaagtag cgcgcagatt gcccggtggc
     7441 gctgcgctta ccgggcctac aaaaccccaa accgtacacc gtaggccgga taaggcgcag
     7501 ccgcatccgg caatgccaca ggatatcgct atgttcgata aacacaccca caccctgatc
     7561 gcccagcgtc tggatcaggc agaaaaacag cgcgaacaga tccgcgcgat ctcgctggat
     7621 tacccagaga tcaccatcga agacgcttac gcggtgcagc gcgaatgggt tcgcctgaaa
     7681 atcgccgaag gccgtacgct gaaaggccac aaaatcggtc tgacctcaaa agcaatgcag
     7741 gccagctcgc agatcagcga accagattac ggtgccctgc tggatgacat gttcttccac
     7801 gatggcagcg atatcccgac cgatcgcttt atcgtgccgc gcattgaagt ggagctggct
     7861 ttcgtgctgg caaaaccgct gcgtgggcca aactgcacgc tgttcgacgt ctacaacgcc
     7921 acggactacg tgatcccggc gctggagctg atcgacgctc gctgccacaa catcgatccg
     7981 gaaacccagc gcccgcgcaa agtgttcgac accatttctg ataacgccgc caacgccggg
     8041 gtgatcctcg gtggtcgtcc gatcaaacca gacgaactgg atctgcgttg gatctccgcc
     8101 ctgatgtatc gcaatggcgt gattgaagaa accggcgtcg ccgctggcgt gctgaatcat
     8161 ccggcaaacg gcgtggcctg gctggcgaac aaactcgcac cgtatgacgt acaactggaa
     8221 gccgggcaaa tcattctcgg tggttcgttc acccgcccgg ttccggcgcg taagggcgac
     8281 accttccacg tcgattacgg caacatgggt tccattagct gccgctttgt ttaaggagag
     8341 aacgatggaa aacagcttta aagcggcgct gaaagcaggc cgtccgcaga tcggattatg
     8401 gctggggctg agtagcagct acagcgcaga gttactggcc ggagcaggat tcgactggtt
     8461 gttgagcgac ggtgagcacg cgccgaataa cgtgcaaacc gtgctcaccc agctacaggc
     8521 gattgcgccc taccccagcc agccggtagt acgtccgtcg tggaacgatc cggtgcaaat
     8581 caaacaactg ctggacgtcg gcacacaaac cttgctggtg ccgatggtac aaaacgctga
     8641 cgaagcccgt gaagcggtac acgccacccg ttatcccccc gccggtattc gcggtgtggg
     8701 cagtgcgctg gcccgcgcct cgcgctggaa tcgtattcct gattacctgc aaaaagccaa
     8761 cgatcaaatg tgcgtgctgg tgcagatcga aacgcgtgag gcaatgaaga acttaccgca
     8821 gattctggac gtggaaggcg tcgacggcgt gtttatcggc ccggcggatc tgagcgccga
     8881 tatgggttat gccggtaatc cgcagcaccc ggaagtacag gccgccattg agcaggcgat
     8941 cgtgcagatc cgtgaatcgg gcaaagcgcc ggggatcctg atcgccaatg agcaactggc
     9001 aaaacgctat ctggaactgg gcgcgctgtt tgtcgccgtc ggcgttgaca ccaccctgct
     9061 cgcccgcgcc gctgaagcgc tggcagcacg gtttggtgcg caggccaccg ccgtgaagcc
     9121 cggcgtgtat taatgccgga tgcgctgcac ttatccggcc tacactcgca ccaaaccgta
     9181 ggccggataa ggcgtttacg ccgcatccgg caaaaagccg taccaaatcg cggaccggat
     9241 aaggcgttac gccgcatccg ccataaacct tgtcgtaccc tacaaaaatc ccattagagg
     9301 aagaaaaatg agcgacacct cacctgccat accggagagt atcgatccgg cgaatcagca
     9361 taaagcgctg actgccggac aacaggcggt tattaagaag ctatttcgcc gcctgatcgt
     9421 ctttctgttc gtgctgttta tcttctcgtt ccttgatcgc atcaacatcg gctttgccgg
     9481 actcacgatg ggacgcgacc tcggtctgag cgccaccatg tttggcctcg ctaccaccct
     9541 gttctatgcc gcttatgtca tcttcggcat tcccagcaac attatgctga gtattgtcgg
     9601 tgcgcggcgc tggatcgcca ccatcatggt gctctggggc atcgcctcta ctgccaccat
     9661 gtttgccact ggccccacca gcttgtacgt actgcgtata ctggttggca ttaccgaagc
     9721 cggctttctg cctggtattc tgctgtattt aaccttctgg tttccggcct atttccgcgc
     9781 ccgtgccaac gccttgttta tggtagcaat gccggtaacg acagcgttgg gctcgatcgt
     9841 ttccggctac attttgtcgc tggatggcgt catggcatta aaaggctggc agtggctgtt
     9901 tttgctggaa ggcttcccgt cggtattact cggcgtcatg gtgtggttct ggcttgatga
     9961 ctcaccggac aaagctaagt ggctgacgaa agaagacaaa aaatgcctgc aagagatgat
    10021 ggataacgat cgtctgacgc tggttcagcc agagggagcc atcagccacc acgccatgca
    10081 acaacgcagt atgtggcggg agatcttcac tccggtggtg atgatgtata ccctggcgta
    10141 tttctgcctg accaacacac ttagtgcgat cagcatctgg acaccgcaga tcctgcaaag
    10201 ttttaatcag ggcagcagta atatcaccat cggcctgctg gccgccgtac cgcagatttg
    10261 taccattctc gggatggtct actggagccg tcactcagat cgccgccagg aacgaaggca
    10321 tcacaccgcc cttccttatt tgttcgctgc cgcaggttgg ttactggctt cggcaactga
    10381 tcacaacatg atccagatgc tggggatcat tatggcttcg accggatcat tcagcgcaat
    10441 ggcgattttc tggacaacac cggatcagtc catcagcctg cgggcacgag cgatcggtat
    10501 tgcggtgatc aacgccactg gcaacattgg ttcagcgtta agtccgttta tgatcggctg
    10561 gttgaaagat ttgaccggca gctttaacag tggattgtgg tttgttgccg cgctgctggt
    10621 gattggtgcg gggattatct gggcgattcc aatgcagtcc tcccgtccgc gagcgacccc
    10681 gtaaggaacg acgatgtgtg accgtcagat tgccaatatt gatatcagca aagagtacga
    10741 tgaaagcctg ggcacggacg atgtgcatta tcagtcgttc gcccgcatgg cggcattttt
    10801 tggccgccat atgctgccac atcgccacga acagtacttt cagatgcatt tcctcaatag
    10861 cggacagatt gagctacagc ttgacgatca tcgctactcg gtggaagcgc ccctgtttgt
    10921 cctgacgccg ccgtcagtac ctcatgcgtt tattacggag tctgacgccg acggtcatgt
    10981 gttgacggta cgggaagatc tgatctggcc cctgctggaa gttctttatc cgggcactcg
    11041 ggaaaccttc ggcctgccgg gggcctgtca ctggcagata aacccgacga actggcggcg
    11101 ctggaacact attggcaact gatagagcgg gaatcggtgg aacaactgcc tggacgggaa
    11161 cacaccctga cgttactggc acaggcagtg ttcaccctac tgctgcgtaa cgcaaaactc
    11221 gacgaccatg ccgccagcgg gatgcgcgga gaattaaaac tgttccagcg ttttaatatg
    11281 ctgattgaaa gccattttca tcagcactgg acagtaccgg attacgctaa cgaactgcat
    11341 atcaccgaat cacgactcac ggacatctgc cgtcgctttg ccaaccgtcc gccaaaacgg
    11401 ttgattttcg acaggcagct gcgagaagcc aagcggctgc tgctgttttc tgataacgcc
    11461 gtgaacaata ttgcctggca actcggtttt aaggatccgg cttattttgc gcgctttttt
    11521 aatcgcttag tcggttgctc gcccagtgct tatcgcgcca aaaaagtacc tgtgacgtga
    11581 aaatccctta gccttaacgg gaaaccaggc accacctgct attccccttt ctccgcctgg
    11641 agcaagggga tttagtaacg tcaaaaatcg ctaaaagcga cctcgatcac aaaaccgtac
    11701 ccgacctgaa aagtaccagc cattgtccca aaagtctctt cccgtaatcg cccctgcaag
    11761 ctttaattga ataacaaaaa caacacacaa aattaacaat cgtattccga ttaatactgt
    11821 agaggtcgac atgaaaccag aagatttccg cgccagtacc caacgtccgt tcaccgggga
    11881 agagtatctg aaaagcctgc aggatggtcg cgagatctat atctatggcg agcgagtgaa
    11941 agacgtcact actcatccgg catttcgtaa tgcggcagcg tctgttgccc aactgtacga
    12001 cgcgctacac aaaccggaga tgcaggactc tctgtgctgg aacaccgaca ccggcagcgg
    12061 cggctatacc cataaattct tccgcgtggc gaaaagtgcc aacgacctgc gccagcaacg
    12121 cgatgccatc gctgagtggt cacgcctgag ctatggctgg atgggccgta ccccagacta
    12181 caaagctgct ttcggttgcg cactgggcgc gaatccgggc ttttacggtc agttcgagca
    12241 gaacgcccgt aactggtaca cccgtattca ggaaactggc ctctacttta accacgcgat
    12301 tgttaaccca ccgatcgatc gtcatttgcc gaccgataaa gtaaaagacg tttacatcaa
    12361 gctggaaaaa gagactgacg ccgggattat cgtcagcggt gcgaaagtgg ttgccaccaa
    12421 ctcggcgctg actcactaca acatgattgg cttcggctcg gcacaagtga tgggcgaaaa
    12481 cccggacttc gcactgatgt tcgttgcgcc aatggatgcc gatggcgtaa aattaatctc
    12541 tcgcgcctct tatgagatgg tcgcgggtgc taccggctcg ccatacgact acccgctctc
    12601 cagccgcttc gatgagaacg atgcgattct ggtgatggat aacgtgctga tcccatggga
    12661 aaacgtactg atctaccgcg atttcgatcg ctgccgtcgc tggacaatgg aaggcggttt
    12721 tgcccgtatg tatccgctgc aagcctgtgt gcgcctggca gtgaaattag acttcattac
    12781 agcactgctg aaaaaatcac tcgaatgtac cggcaccctg gagttccgtg gtgtacaggc
    12841 cgatctcggt gaagtggtgg cgtggcgcaa caccttctgg gcattgagtg actcgatgtg
    12901 ttctgaagcg acgccgtggg tcaacggggc ttatttaccg gatcatgccg cactgcaaac
    12961 ctatcgcgta ctggcaccaa tggcctacgc gaagatcaaa aacattatcg aacgcaacgt
    13021 taccagtggc ctgatctatc tcccttccag tgcccgtgac ctgaacaatc cgcagatcga
    13081 ccagtatctg gcgaagtatg tgcgcggttc gaatggtatg gatcacgtcc agcacatcaa
    13141 gatcctcaaa ctgatgtggg acgccattgg cagcgagttt ggtggtcgcc acgaactgta
    13201 tgaaatcaac tactccggta gccaggatga gattcgcctg cagtgtctgc gccaggcaca
    13261 aagctccggc aatatggaca agatgatggc gatggttgat cgctgcctgt cggaatacga
    13321 ccagaacggc tggactgtgc cgcacttgca caacaacgac gatatcaaca tgctggataa
    13381 gctgctgaaa taacgcagca ggaggttaag atgcaattag atgaacagcg cctgcgcttt
    13441 cgtgacgcga tggccagcct gtcggcagcg gtaaatatta tcaccaccga gggcgacgcc
    13501 ggacaatgcg ggattacggc aacggccgtc tgctcggtca cggatacacc accatcgctg
    13561 atggtgtgca ttaacgccaa cagtgcgatg aacccggttt ttcagggcaa cggtaagttg
    13621 tgcgtcaacg tcctcaacca tgagcaggaa ctgatggcac gccacttcgc gggcatgaca
    13681 ggcatggcga tggaagagcg ttttagcctc tcatgctggc aaaaaggtcc gctggcgcag
    13741 ccggtgctga aaggttcgct ggccagtctt gaaggtgaga tccgcgatgt gcaggcaatt
    13801 ggcacacatc tggtgtatct ggtggagatt aaaaacatca tcctcagtgc agaaggtcac
    13861 ggacttatct actttaaacg ccgtttccat ccagtgatgc tggaaatgga agctgcgatt
    13921 taagctccag ccccttcacg tattcgtcga aggggcattt ttattgtgat ctcaatcaca
    13981 tatccacccg atgaataatt cttgcccaac cgctcaccgc cattcctgac cgcttacgtc
    14041 cctaaaataa ccactcagtt atttacctta ctttacgcgc gcgtaactct ggcaacatca
    14101 ctgcaggata gcggtcaatt tacctcctca aacgcaacgc aaacctagaa cggcttcggc
    14161 ctatgattaa caaattactc tatgaatttt ggtttgcagg aaggcagcaa gtgagtgaat
    14221 ccccgggagc ttacaacagt aagtgacaga ggtgaacgaa cgcagctgcc gcacctgtaa
    14281 gccaaaagac gacgagtaaa atgccaggtt ttactatgga tacgaaaaaa ctattcaagc
    14341 acataccctg ggtgattctc ggaatcatcg gtgcattctg cctcgcggta gttgcattac
    14401 gtcgggggga gcacgtcagc gccctgtgga tcgtggtcgc ctctgtgtcg gtgtatctgg
    14461 tggcgtatcg ctactacagt ctgtacatcg cccagaaggt gatgaaactc gaccccacgc
    14521 gcgcgacgcc tgcggttatt aacaacgacg gtctgaacta cgttccgacc aaccgttacg
    14581 tgttgtttgg tcaccacttc gccgctatcg ccggtgccgg tccgctggtt ggtccggtgc
    14641 tcgccgcgca gatgggctac ctgcctggca cgctgtggct gctggcgggg gtagtactgg
    14701 ccggtgcggt tcaggacttt atggtgctgt ttatctcctc tcgccgtaac ggcgcatctc
    14761 tcggtgagat gatcaaagaa gagatgggac cagtaccggg gactatcgcg ctgtttggct
    14821 gtttcttaat catgatcatc atcctcgccg ttctggcgct gattgtggtt aaagccctgg
    14881 ccgaaagtcc gtggggtgtc ttcaccgttt gctcaaccgt accgattgcg ctgtttatgg
    14941 gtatctacat gcgctttatc cgtccggggc gtgtaggtga agtttctgtt attggtatcg
    15001 tgctgctggt tgcctctatc tatttcggtg gcgtgattgc tcacgatccg tactggggtc
    15061 cggcactgac ctttaaagac accaccatta ccttcgcgct gattggctat gcgtttgttt
    15121 ccgcactgct gccggtgtgg ctgatcctcg caccgcgcga ctatctggca accttcctga
    15181 aaatcggcgt tatcgtcggc ctggcgctgg gtatcgtggt actgaacccg gaactgaaaa
    15241 tgcctgcaat gacccagtac attgacggta ctggcccgct gtggaaaggc gctctgttcc
    15301 cgttcctgtt catcaccatc gcctgtggtg cggtatctgg cttccacgcg ctgatctctt
    15361 ccggtacgac gccgaaattg ctggctaacg aaaccgacgc gcgtttcatt ggctacggcg
    15421 caatgctaat ggaatccttc gtggcgatta tggcgctggt tgctgcgtcc atcatcgaac
    15481 cgggtcttta cttcgcgatg aataccccgc ctgctggcct tggcatcacc atgcctaacc
    15541 tgcatgaaat gggtggcgag aacgcgccga tcatcatggc gcagctgaaa gacgttaccg
    15601 cacacgcggc ggcgaccgtc agctcctggg gcttcgtgat ttcgccagag cagatcctgc
    15661 aaaccgcgaa agacattggt gagccttctg tcctgaaccg tgcaggtggc gcgccgacgc
    15721 tggcggtagg tatcgctcac gtgttccaca aagtgctgcc gatggctgac atgggcttct
    15781 ggtatcactt cggtattctg ttcgaagccc tgttcatcct gaccgcgctg gatgcgggta
    15841 ctcgttctgg ccgctttatg ctgcaagacc tgctgggtaa cttcatcccg ttcctgaaaa
    15901 aaaccgactc tctggttgcc ggtatcatcg gtactgcggg ctgtgtgggt ctgtggggct
    15961 acctgctgta tcagggcgtg gtcgatccgc tgggcggcgt taagagcctg tggccgctgt
    16021 tcggtatttc caaccagatg ctggcagccg tagcgctggt actgggcacc gttgtgctga
    16081 ttaagatgaa gcgcacccaa tacatctggg taactgttgt tccggctgta tggctgctta
    16141 tctgcaccac ctgggcgctg ggtctgaaac tgttcagcac caacccgcag atggaaggct
    16201 tcttctacat ggcaagccag tacaaagaga agattgctaa cggtactgac ctgacggcgc
    16261 agcagattgc caacatgaac cacatcgttg tgaacaacta caccaacgca ggcctgagta
    16321 ttctgttcct gattgtggtg tacagcatca tcttctacgg tttcaaaacc tggcttgcgg
    16381 tgcgtaacag cgacaaacgt actgacaaag aaactccgta cgttccaatc ccggaaggcg
    16441 gcgtgaagat ctcttcgcac cactaaccgg ttgccggatg cgctgcgcgt atccggccta
    16501 caaagtgtct atcgtaggcc ggataaggcg tttacgccgc atccggcaaa tccctagccc
    16561 ggaccttccg ggctttacgc atatctggaa ggcaaaatgt ttggtaactt aggacaggca
    16621 aaaaaatatc tcggccaggc ggcgaagatg ttgattggca ttccagacta cgacaactac
    16681 gtcgagcata tgaagaccaa ccatcccgac aagccgtaca tgagctatga agaattcttc
    16741 cgcgaacgcc agaacgcgcg ctacggcggc gatggtaaag gcggtatgcg ctgttgttaa
    16801 tggagagagc atgaacccga ttgcagttac cctactcacc ggttttttag gcgcgggcaa
    16861 aaccaccctg ctgcgccata ttcttaacga acaacacggc tacaagattg ccgtgattga
    16921 aaacgaattc ggcgaagtct ccgttgatga tcaactgatt ggcgaccgcg ccacgcagat
    16981 caaaacgctg accaacggct gcatctgctg ttcgcgctcc aacgagctgg aagacgcact
    17041 actcgacctg ctggataatc tcgacaaggg caatattcag ttcgaccgtc tggtcattga
    17101 atgcaccggc atggccgatc ccggcccgat tattcagacc ttcttctccc atgagatttt
    17161 atgccagcgc tacctgctgg acggggtgat tgcgctggtg gatgcggtac atgccgatga
    17221 gcagatgaac cagttcacca tcgcccagtc ccaggttggc tacgccgacc gtattctgct
    17281 gacgaaaacc gacgtcgcag gcgaagcaga gaaactgcgt gaacgcctgg cgcgcatcaa
    17341 cgcccgcgca ccggtctaca ccgttaccca cggcgatatc gacctgggcc ttctgttcaa
    17401 caccaacggt tttatgctgg aagaaaacgt cgtcagcacc aaaccgcgtt tccactttat
    17461 cgcggacaaa caaaacgata tttcgtcgat tgtggtggaa ctggattacc cggtagatat
    17521 cagcgaagtt tcccgggtga tggaaaacct gctgctggaa tcggcggata aactgctgcg
    17581 ttacaaaggg atgctgtgga ttgacggcga acctaaccgc ctgctgttcc agggcgtcca
    17641 gcgcctctac agcgccgact gggaccgccc gtggggcgat gaaaaaccgc atagcacgat
    17701 ggtgtttatc gggattcagt tgccggagga tgagattcgg gcggcgtttg cgggactcaa
    17761 aaagtaacca gccctccaac atcacaatac ctgagacttt atcaccctca tattcctcca
    17821 gaatatgagg gcattcgggc ttaattatct ctgaacgtgc aacacttcct acgactcctt
    17881 atgcgcctcc acatcctgct tcgttaacca gagcgactta cgaccaaaat tttcgtacat
    17941 tttcagctga tcttcatagt gctgatcaac tgttccatcg ggagcaataa acccactctg
    18001 accgggtgcg accacatccc aggcaagcac cggacgatcg cttgtcgttg gtgagaaaac
    18061 aatcatatcg ttttctgttc cacggttttg atactccgcc tgatgacgcg tttcttccgc
    18121 tgcggcctgc ggtacatcaa agaaattatt tgcccggaac gttaaggcca ttgcaggtgt
    18181 tttccagtta ctcacattat tgccatagcg tttggaaaga gtctcccagg tatcttccag
    18241 cgcagccaac acaacctcct gctgtggttt cccagcaaac agatcaaccg cctgtgggat
    18301 tggtgatttg tctccctgca ccgcctcata caaaattttt gctccaacac ttatattcag
    18361 cgaaccagtt gggccgtcct gggttgtttc gtagccactg gcgctgtacc acttatcaaa
    18421 tggcataggt acggcagcca ctacggtacg cttcaacata ctggtcagcc aaacgttcag
    18481 gatggcagag cctggc
//
LOCUS       DAJVUK010000080        18355 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.080, whole genome shotgun sequence.
ACCESSION   DAJVUK010000080 DAJVUK010000000
VERSION     DAJVUK010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18355
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.080"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..321)
                     /locus_tag="OQQ57_002470"
     CDS             complement(<1..321)
                     /locus_tag="OQQ57_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707676.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HCS1957200.1"
                     /translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
                     LKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
                     GKWVR"
     gene            complement(326..511)
                     /locus_tag="OQQ57_002471"
     CDS             complement(326..511)
                     /locus_tag="OQQ57_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HCS1957201.1"
                     /translation="MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLY"
     gene            complement(508..3147)
                     /locus_tag="OQQ57_002472"
     CDS             complement(508..3147)
                     /locus_tag="OQQ57_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HCS1957202.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL
                     PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVIAFEYQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALISGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
                     EAKQADLILYARLPAQLSGSLTDPTLAFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTNINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKECEEKQ"
     gene            3355..4344
                     /gene="ldhA"
                     /locus_tag="OQQ57_002473"
     CDS             3355..4344
                     /gene="ldhA"
                     /locus_tag="OQQ57_002473"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCS1957203.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPANYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            4455..4877
                     /gene="hslJ"
                     /locus_tag="OQQ57_002474"
     CDS             4455..4877
                     /gene="hslJ"
                     /locus_tag="OQQ57_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HCS1957204.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(4874..5140)
                     /locus_tag="OQQ57_002475"
     CDS             complement(4874..5140)
                     /locus_tag="OQQ57_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HCS1957205.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            5414..8938
                     /gene="nifJ"
                     /locus_tag="OQQ57_002476"
     CDS             5414..8938
                     /gene="nifJ"
                     /locus_tag="OQQ57_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HCS1957206.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DSYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQTLPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGKRETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTQPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVEGNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
     gene            9304..10437
                     /gene="ompN"
                     /locus_tag="OQQ57_002477"
     CDS             9304..10437
                     /gene="ompN"
                     /locus_tag="OQQ57_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HCS1957207.1"
                     /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGFSTTYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADVGATY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            10578..11012
                     /gene="uspF"
                     /locus_tag="OQQ57_002478"
     CDS             10578..11012
                     /gene="uspF"
                     /locus_tag="OQQ57_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HCS1957208.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEL
                     AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            11569..12483
                     /gene="sitA"
                     /locus_tag="OQQ57_002479"
     CDS             11569..12483
                     /gene="sitA"
                     /locus_tag="OQQ57_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000949004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HCS1957209.1"
                     /translation="MHSIKKVTMLLGCLALTCSIAFQASATEKFKVITTFTIIADMAK
                     NVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNG
                     VPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQ
                     RNADTYKAKITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINAD
                     QQGTPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTEN
                     GPVPTYIDLLKVTTSTLVQGIKAGKREK"
     gene            12483..13310
                     /gene="sitB"
                     /locus_tag="OQQ57_002480"
     CDS             12483..13310
                     /gene="sitB"
                     /locus_tag="OQQ57_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HCS1957210.1"
                     /translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
                     GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
                     MGRYGYMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
                     GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
                     VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
     gene            13307..14164
                     /gene="sitC"
                     /locus_tag="OQQ57_002481"
     CDS             13307..14164
                     /gene="sitC"
                     /locus_tag="OQQ57_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HCS1957211.1"
                     /translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
                     GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
                     DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
                     AHKALEDRS"
     gene            14161..15018
                     /gene="sitD"
                     /locus_tag="OQQ57_002482"
     CDS             14161..15018
                     /gene="sitD"
                     /locus_tag="OQQ57_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HCS1957212.1"
                     /translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
                     DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
                     FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
                     FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
                     HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
                     HTQDLLSPN"
     gene            complement(15346..16119)
                     /locus_tag="OQQ57_002483"
                     /pseudo
     CDS             complement(15346..16119)
                     /locus_tag="OQQ57_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISSfl3 family transposase"
     gene            complement(16125..16637)
                     /locus_tag="OQQ57_002484"
                     /pseudo
     CDS             complement(16125..16637)
                     /locus_tag="OQQ57_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309983.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
     gene            complement(16676..16963)
                     /locus_tag="OQQ57_002485"
     CDS             complement(16676..16963)
                     /locus_tag="OQQ57_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957213.1"
                     /translation="MKIEELREIFSENGLYAVRVENGAIVSHCRIRCLQSQQRKSGAV
                     LFYFCNGLLTDGFILREDEFVTSLRVLKEIGFKAGFLLLLKNKLIYNLEQD"
     gene            complement(17213..17368)
                     /gene="hokD"
                     /locus_tag="OQQ57_002486"
     CDS             complement(17213..17368)
                     /gene="hokD"
                     /locus_tag="OQQ57_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokD"
                     /protein_id="HCS1957214.1"
                     /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF
                     VDYESRK"
     gene            complement(17596..18261)
                     /locus_tag="OQQ57_002487"
     CDS             complement(17596..18261)
                     /locus_tag="OQQ57_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HCS1957215.1"
                     /translation="MTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDY
                     TIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGI
                     RCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWD
                     YNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKE
                     EKE"
BASE COUNT         4563 a         4680 c         4400 g         4712 t
ORIGIN      
        1 tcgtacccat ttaccgttta tcccttgtac atattccccc ggtttggccc gagctacgag
       61 cttttgcccg gcgagtttcg cgatatcatc tacagacaca ttattttgct ttgccagttg
      121 ttggtaactc gctttacgtt cggcattaat gtcggttact aatttctctg tttcagcatc
      181 cgttttcagc gcaaccagat aaccataaaa tgtttccccg acccgcccct gcgttctggc
      241 ttcatccaga gtcaatgcca ttacattgct gcttaccagc ccaacaagaa acgcacaaag
      301 aagtaatgtt ttcttcatca tcgcctcagt aaagatcgct acgagtttca agcagctctt
      361 cgacatcttt gtctgccttg atgatgatct catgctcaat tttaacgttc atattgatag
      421 tgatcggttc cttgggcgca gcgacttcaa tacgcggcgt acaggcagcc agcataaaag
      481 atgacgtcaa cgcagccagt aaaattttca ttgtttttcc tcacactctt ttccttgcgg
      541 acagtcattt cccggcagac gtgcgttctg ctccaaccat gcctggagat tatcgccaaa
      601 gcgtaaactg cgccacagcg taaaaatatt ctcttcatga tggtaattaa ggtttaccgt
      661 accgctttta ccatcaacgc gactggtacc tgtaatgttg gcctgcatgg ttaataaacc
      721 gagattatct aaattaatat ttgtcgatga acggctaatt tccatatagc gcaaccagtt
      781 aattgctgaa cccgcagtca tattgtcttt caccaccgca tctgcggtgt ctttatccag
      841 ccgcaaggtc attggcccgc tatttgccag ccaaccatct ttcactatcc atttttcgtt
      901 gtttagccat aacggcaatg caccactaaa tgccccggac atggcgaatt gtttcggatt
      961 gacggcgcta accagttcgc tggatgagag attattcagc cgcaacagcg ccgggtcatg
     1021 ttgcggcata cgtaattgtt tcatcagtac gttaccgcct aacacatcga cgctaacatc
     1081 agtcaacagc aagggttctt cttcagtcca cggataacgc ccttgcaaat cagccgtaat
     1141 atttttcgct gtcaccagat taatcacttc ggcaattcgc aacgtaacgg ggccgcgagt
     1201 ccccagatgc caggctccat cggcaaaacg gaaaggcagg acaaaatcga caccgttaac
     1261 ctgattatct ggcatccagg cactaccgcc tttcaacacg ccgtgccctc ccgcgcggaa
     1321 tccttgttca ggcgcagcag aaaatgcaac ctgagcatac agttcaccat cgcgtaagtt
     1381 catcttccag tcgggtggca ccagcggctg gaatacagtc agtgattgtt ttggccacca
     1441 ggcgttaccg cgcagacgaa taccgtccca gcgaccattt acccgaaccg ggccaatctc
     1501 accagcatgt aaatcgcctt taaagaggaa atacgtcgga tcgcgcccat cgacgctaaa
     1561 ttttaaggtt gatggcggta acacactgcc gccagtgaac agcgtttgcc cggcgtccag
     1621 tgacagcgcg ccgctgaagg agggatgctg tgcgtcacgt acccagacga cgggcttgtc
     1681 cagaattaat cgcggctttt ctaccgtcat cgtaccgtat tgtaactggt cgaaaccggt
     1741 ggagaggtcg gtcagcgtaa tcgtgctgtc atgccattca ccttttcctg cgacatccca
     1801 ggtggcattc atcggtgtaa aactgccttt tccccagtag cgccactgcc agcggcccgc
     1861 gtcagggaga aaatcattcg ccagcccatc catatgcagc acgaaatcgc ccagttcatt
     1921 ttcatgcgcc tgcaaaatgg cctgcaaacg tccgtcaaca ccacgttggg tgacttttac
     1981 acccgctaaa ggccagcgga tttcatcgat gtccagcgaa tcgatgactc ttccctttga
     2041 acgaagtaac gcgcctggct caaaggccag cgttgggtca gtcagacttc cacttagctg
     2101 cgcgggtaag cgggcatata aaatgaggtc cgcctgtttc gcttcaccgg tcagctgcag
     2161 aggcagctgg ctgttatcca tgcttaattt tcctgggcca aaatttagca ccgcgttgcc
     2221 tttacccgct tgcccctggg tcagcacact cagtcgtccg ctgatcagag cgttctcaag
     2281 ccctgcctgc cagttgtcga ctttgacacc cagtcggcca ctcaaaggaa aacctgcata
     2341 cggccaactc cagcgaccat cgcttacggt caattgttga cgagtaattt gccacggcaa
     2401 atcgagcaac ggatcgccgt tatcacgtgc cagcacaatc aattgcccgc tattttcctg
     2461 ccagtccagc tctgcatcca ccagtgacgg ttcctgcggc aagtttaacg tcgcagtagc
     2521 atgcccactt acaggaagtc catccggcac gagcggcata gtaaattccc ccaccagttt
     2581 aaccggcggc tgatattcaa acgcgatgac atccagttcg ctgactgtaa gttgttgccc
     2641 tttcagctgg ccttgaaatt taactttttc gccctgataa cgcagttgct ggatatcaga
     2701 ggttaatgcg agagagagtt ttccctgcca ttcctgccag ggagaaaaaa tcagtttatc
     2761 gatattgatc caggtgttag gcagcatgga ctgccactgc gcgagggttt ttggagcagc
     2821 tggcgattgc tccgtctgcg gcaatttcgc cagacaagca gaatcaagtt ctaccgtgcc
     2881 gacgttcaat aaccagcggc tgggatgtga aaggctggcg ttggtgatat gtgcaagctg
     2941 acaatctccc accagataac ggagatcggg aatgattaaa cctttacgcg taatgcgtgg
     3001 gctttcatct aatgcaatac gtgtcccgag cggtagccag atgcccgcca gcgtgggaac
     3061 ccacagcccg agcgtcatca gcagcgtcaa cggcacaaga ataatcagta ataacagcgc
     3121 gagaacggct ttatatttac ccagcatggg tagttaatat cctgatttag cgaaaaatta
     3181 agcattcaat acgggtattg tggcatgttt aaccgttcag ttgaaggttg cgcctacact
     3241 aagcatagtt gttgatgaat ttttcaatat cgccatggtt ttcaattata tttgaaattt
     3301 tgtaaaatat ttttagtggc ttaaatgtga ttcaacatca ctggagaaag tcttatgaaa
     3361 ctcgccgttt atagcacaaa acagtacgac aagaagtacc tgcaacaggt gaacgagtcc
     3421 tttggctttg agctggaatt ttttgacttt ctgctgacgg aaaaaaccgc taaaactgcc
     3481 aatggctgcg aagcggtatg tattttcgta aacgatgacg gcagccgccc ggtgctggaa
     3541 gagctgaaaa agcacggcgt taaatatatc gccctgcgct gtgccggttt caataacgtc
     3601 gaccttgatg cggcaaaaga actggggctg aaagtagtcc gtgttccagc ctatgatcca
     3661 gaggccgttg ctgaacacgc catcggtatg atgatgacgc tgaaccgccg tattcaccgc
     3721 gcgtatcagc gtacccgtga cgctaacttc tctctggaag gtctgaccgg ctttactatg
     3781 tatggcaaaa cggcaggcgt tatcggtacc ggtaaaatcg gtgtggcgat gctgcgcatt
     3841 ctgaaaggtt ttggtatgcg tctgctggcg ttcgatccgt atccaagtgc agcggcgctg
     3901 gaactcggtg tggagtatgt cgatctgcca accctgttct ctgaatcaga cgttatctct
     3961 ctgcactgcc cgctgacacc ggcaaactac catctgttga acgaagccgc cttcgatcag
     4021 atgaaaaatg gcgtgatgat cgtcaatacc agtcgcggtg cattgattga ttctcaggca
     4081 gcaattgaag cgctgaaaaa tcagaaaatt ggttcgttgg gtatggacgt gtatgagaac
     4141 gaacgcgatc tgttctttga agataaatcc aacgacgtga tccaggatga cgtattccgt
     4201 cgcctgtctg cctgccacaa cgtgctgttt accgggcacc aggcattcct gacagcagaa
     4261 gctctgacca gtatttctca gactacgctg caaaacttaa gcaatctgga aaaaggcgaa
     4321 acctgcccga acgaactggt ttaatgttgc agctcccctg caatccaggg gagctgattc
     4381 agataatccc caatgacctt tcattctcta ttcttaaaat agtcctgagt cagaaactgt
     4441 aattgagaac cacaatgaag aaagtagccg cgtttgttgc gctaagcctg ctgatggcgg
     4501 gatgtgtaag taatgacaaa attgctgtta cgccagaaca gctacagcat catcgctttg
     4561 tgctggaaag cgtaaacggt aagcccgtga ccagcgataa aaatccgcca gaaatcagtt
     4621 ttggtgaaaa aatgatgatt tccggcagca tgtgtaaccg ctttagcggt gaaggcaaac
     4681 tgtctaatgg tgaactgaca gccaaagggc tggcaatgac ccgtatgatg tgcgctaacc
     4741 cgcagcttaa tgaactcgat aacaccatta gcgaaatgct gaaagaaggt gcacaagtgg
     4801 atctgaccgc gaaccagtta acgctggcga ccgcgaaaca gacattaact tataagctgg
     4861 cggatttaat gaattaatag ctgccacagc tcccggcggc aagtgactgt tcgctacagc
     4921 gtttgccgtt gggtaatgca cacatcccaa tcgccgtgcc atccagttga cgggcaacag
     4981 aaagcgaacc gccgatcatt gcacaatttg cttctccact actggacatc gacgctttta
     5041 aacctggcgc tacgtgcgcc gcagtcgcct gctgaacagg ttcactacta cacgccgaca
     5101 acaataaagc ggcacaccct acccaaaacg ctgctcgcat cttttcttcc tctgatcttc
     5161 aagccaaacg acaccgccat aaataatagg cagcacagag ggcgacatcg agagctgtcc
     5221 tgcgcgttgc cccgcatttt tactttttta tggctatttt tttgccctct gtttgatcaa
     5281 aacattcatt acgctgatgt gggggacaca aaagcgaaaa tgcagaagaa agccatttgc
     5341 taaaattgaa agattactac tgggcgcgca gcaatttcgt gcgcccctca tttgcgcaat
     5401 gtaagggtgt catatgatta ctattgacgg taatggcgcg gttgcttcgg tggcgtttcg
     5461 caccagtgaa gttatcgcca tctaccctat tacccccagt tccacgatgg cagaacaggc
     5521 tgatgcctgg gccggaaacg gcttgaagaa cgtttgggga gacacaccac gcgtggttga
     5581 aatgcagtcg gaagcgggtg ctatcgctac cgtgcatggc gctttgcaga cgggtgccct
     5641 ttcaacatcg tttacgtcat cgcagggttt gctgctgatg atcccgacac tgtacaaact
     5701 ggcaggcgaa ctcacaccgt ttgtcctgca tgtagcggca cgtaccgttg ccacacatgc
     5761 actctctatt tttggcgatc attccgacgt catggcggtg cgccagacgg gttgcgcgat
     5821 gttgtgtgcg gcaaacgtcc aggaagcgca agactttgct ctcatttcgc acatcgcgac
     5881 gctgaaaagc cgcgtgccat ttattcattt ctttgatggt ttccgcacgt cccacgaaat
     5941 caataaaatt gtcccgctgg ccgatgacac gattcttgat ctcatgccgc aggccgaaat
     6001 tgatgctcat cgcgcccggg cgctcaaccc ggaacatccg gtgatccgtg gtacgtccgc
     6061 caatcctgac tcttatttcc agtctcgcga agccaccaac ccctggtaca acgcagtcta
     6121 tgaccatgtt gaacaggcga tgaatgattt ctctgccgcg acaggtcgtc agtatcagcc
     6181 gtttgaatat tacgggcatc cgcaagctga acgggtgatt atcctgatgg gctcagccat
     6241 tggcacctgt gaagaagtgg ttgatgaatt gctaacccgt ggcgaaaaag tcggcgtgct
     6301 gaaagttcgc ctgtaccgcc ccttctcagc caaacacttg ctacaaactc taccgggatc
     6361 cgtacgcagc gtggcggtac tggacagaac caaagaaccc ggtgcccagg cagaaccgct
     6421 ctatctggat gtgatgaccg cactggcaga agcctttaat aatggcaagc gcgaaactct
     6481 gccccgtgtc attggtgggc gctatggtct ttcatccaaa gaatttggcc cggactgtgt
     6541 actggcggta tttgccgagc tcaacgcggc taaaccgaaa gcgcgcttta cggttggtat
     6601 ttacgatgat gtaaccaatc tgtccctgcc gttgccggaa aacacccagc caaactcggc
     6661 gaaacttgaa gccttgtttt atggccttgg tagtgatggc agcgtttccg cgaccaaaaa
     6721 caatatcaag attatcggta attccacgcc gtggtacgca cagggctatt ttgtttacga
     6781 ctccaaaaaa gcgggcggcc tgacggtttc tcaccttcgc gtgagcgaac agccgattcg
     6841 ttccgcttat ctcatttccc aggctgattt tgttggctgc caccagttgc agtttatcga
     6901 taaatatcag atggctgagc gtttaaaacc tggcggcatt ttcctgctca acacgccgta
     6961 cagcgcagat gaagtgtggt cgcgcttgcc gcaagaagtt caggccgtgt taaaccagaa
     7021 aaaagcgcgc ttctatgtga ttaacgcggc gaaaatcgcc cgcgaatgtg gcctggcggc
     7081 ccgtattaat accgtcatgc agatggcttt tttccatctg acgcaaattc tgcctggcga
     7141 tagcgccctc gcagaattgc agggtgcgat tgccaaaagt tacagtagca aaggccagga
     7201 tctggtggaa ggcaactggc aggctctggc gctggcgcgt gaatccgtag aagaagttcc
     7261 gttgcaaccg gtaaatccgc acagcgccaa tcgaccgcca gtggtttccg atgccgcccc
     7321 tgatttcgtg aaaaccgtaa ccgcagcgat gctcgcaggg cttggtgatg ccctccccgt
     7381 ttcggcgctg ccgccagacg gcacctggcc gatggggacc actcgctggg aaaaacgcaa
     7441 tatcgccgaa gagatcccca tctggaaaga ggaactctgt acccaatgta accactgcgt
     7501 cgccgcttgc ccacactcag ctattcgcgc aaaagtggta ccacccgaag cgatggaaaa
     7561 cgcccctgcc agcctgcatt cgctggatgt gaaatcgcgt gatatgcgcg ggcagaaata
     7621 tgtcttgcag gtggctccgg aagattgcac cggttgtaac ctgtgcgtcg aagtttgccc
     7681 ggcgaaagac cgtcagaatc cagagattaa agccatcaat atgatgtcgc gcctggaaca
     7741 tgtcgaagaa gagaaaatca attacgattt cttcctcaac ctgccagaaa tcgaccgtag
     7801 caaactggaa cgtattgata ttcgtacatc gcagctgatt acaccgctgt ttgaatattc
     7861 cggtgcttgc tccggttgtg gcgagacgcc gtatattaaa ttgctgactc agctctatgg
     7921 cgaccggatg ttgatcgcta acgccaccgg ctgttcttca atttatggcg gtaacctgcc
     7981 ctctacaccg tataccaccg atgccaacgg tcgtgggccg gcatgggcga actctctatt
     8041 tgaagataat gccgaatttg gccttggttt ccgcctgacg gtcgatcaac accgtgtccg
     8101 cgtgctgcgt ctgctggatc aatttgccga taaaatcccg gcggaattac tgacggcgtt
     8161 gaaatcagac gctacgccag aggttcgtcg agaacaggtc gcagctttac gccagcaact
     8221 caacgatgtt gccgaagcac atgaactgct acgtgatgca gatgcactgg tggaaaaatc
     8281 aatctggctg attggtggtg atggctgggc ttacgatatc ggctttggcg gtctggatca
     8341 tgtattgagt ttgacggaaa acgtcaacat tctggtgctg gatacgcaat gctattccaa
     8401 caccggtggt caggcgtcga aagcgacacc gctgggtgca gtaactaaat ttggcgagca
     8461 cggcaaacgt aaagcgcgta aagatcttgg cgtcagtatg atgatgtacg gtcatgttta
     8521 tgtggcgcag atttctctcg gcgcgcagct gaatcagacg gtgaaagcga ttcaggaagc
     8581 ggaagcgtat ccgggaccat cgctgatcat tgcttatagc ccgtgtgaag agcatggtta
     8641 cgatctggca ctcagccatg accagatgcg ccaactcaca gctaccggct tctggccgct
     8701 atatcgcttc gatcctcgtc gtgccgatga aggcaaactg ccgctggcgc tggattcacg
     8761 cccgccgtca gaagcactgg aagaaacgtt acttcacgag caacgtttcc gtcgtctgaa
     8821 ttcgcagcag ccagaagtgg cagaacagtt atggaaagat gctgcagctg atttgcaaaa
     8881 acgctatgac ttcctggcac aaatggccgg aaaagcggaa aaaagcaaca ccgattaaat
     8941 gctctggata aggattatcc aattctaaaa aaaagcccgg acgactgttc gggcttgtct
     9001 ttttatatgt tggaaaatca gtggcaatgc aatggcccaa cagaaaataa aatctgtgac
     9061 aataaaggca tataacccgc gcagaataac gtatagaaaa ttaaaagtat aatttttatt
     9121 ttgtatgtat tatcttcgat acattcacca gacttattat catttcagaa gaattatttg
     9181 attaaggttt tacttaaggc gtaacaaatg atatttatcg gctaactgaa cttctccttt
     9241 aggatgtttt cactccccgg aatggggata aaaggcaaat aaaataacta aaggatttat
     9301 tcaatgaaaa gcaaagtact ggcactttta attcctgccc tgctcgccgc aggtgctgca
     9361 catgcagccg aagtttataa taaagacggc aacaaattag atctgtatgg caaagttgat
     9421 ggcctgcatt atttttctga taattcagcg aaagatggcg atcagagcta tgcgcgtctg
     9481 ggttttaaag gcgaaaccca aattaacgat caactcactg gctacggtca atgggaatac
     9541 aatattcaag caaacaacac tgaatcttca aaaaaccagt catggacccg tctggcattt
     9601 gccgggctga aatttgcaga ttacggttct ttcgattacg gacgtaatta tggcgtaatg
     9661 tacgacatcg aaggctggac cgatatgctg cctgaatttg gcggtgactc ttataccaat
     9721 gcagacaact ttatgactgg tcgagccaat ggcgtcgcga cttatcgtaa tactgatttc
     9781 ttcggtctgg taaatggtct gaacttcgcg gtgcagtatc aaggtaacaa cgaaggagcc
     9841 agtaatggtc aggaaggcac caacaacgga cgtgatgttc gccatgaaaa cggtgacggc
     9901 tggggttttt ccacaacata tgatttaggc atgggcttta gcgctggtgc ggcatacacc
     9961 tcttctgacc gcaccaatga ccaggttaac catactgcgg cgggtggtga taaagcagac
    10021 gcgtggactg ctgggctaaa atacgatgct aacaatattt acctggcaac catgtattca
    10081 gaaacgcgta atatgacccc gtttggcgac agcgattatg ctgtggcaaa caaaacccag
    10141 aattttgaag tcactgccca gtaccagttt gattttggtc tgcgtccggc agtctctttc
    10201 ctgatgtcta aaggccgtga cctgcacgct gccggtggtg cagacaaccc ggcaggtgtt
    10261 gatgataaag atctggttaa atacgccgat gttggcgcga cttactattt caataaaaac
    10321 atgtccacct acgttgacta taaaatcaac ctgttggatg aagatgacag cttctacgct
    10381 gccaatggca tctctaccga tgatattgtc gctttaggtc tggtttatca gttctaaatc
    10441 ctcctgcccg ctgttatggc gggctttttc tgcttattct tcctcctttg atctaaatta
    10501 aaaatgtgaa ctccatcatt acacaaaaag tgtcatctgg cgttacactt tatgcggata
    10561 ctaaaacagg aggttttatg aacagaacga ttcttgtccc tatcgatatt tccgattcag
    10621 aattaactca acgcgtgatt agccacgttg aggcagaggc aaagattgac gatgcagagg
    10681 ttcatttcct gacggtaata ccttcactgc cctactatgc ctctctgggt ttagcgtatt
    10741 ccgcagaatt accggcaatg gatgacctga aagcggaagc caaatcgcaa ctggaagaga
    10801 tcattaaaaa atttaaactg ccaaccgaca gagtgcatgt ccatgttgag gaaggctcgc
    10861 ccaaagaccg cattctggaa ttggcgaaga agatccccgc tcatatgatc atcattgctt
    10921 cccatcgacc ggatatcacc acttatctgc tcggttccaa cgccgcagct gtagtgcgtc
    10981 acgcagagtg ctccgtgctg gttgtgcgct gacactaacg cccgcacatt gctgcgggct
    11041 ttttgattca tttcgcaaat gtgctgacat tttcccctct aatccgtacc atacacgcca
    11101 ctgtttttat atcagatttc ttatgctggg cattccggca tgacgcatac tcttctgatg
    11161 ccatataacg aattgagtcg cttttaaatg tcgcaaaatc aagaaattag taagaaagaa
    11221 caatacaacc tgaacaagta agggcaaaaa tcacaactat ctgactcata agtattttat
    11281 ttatttttca atatgttaaa cattatcagc gacaacaata agctacgata acccactctt
    11341 tttttgcccc atttttgcca tcaacaattt tcctcataaa gtcatttcaa agcctaatag
    11401 ctgctctact tttttcctca atatcatgtc gccagcagga aacaacctaa tccctgtttt
    11461 aggcctcaaa gctgttaatg ataattattt tcattttgta taggttatgc tataaaacat
    11521 agccgttgct atgtttgttc taattttgct cactataggt actaaattat gcactcaata
    11581 aaaaaagtaa ccatgctctt ggggtgcctc gccctcacct gctcgatcgc atttcaggca
    11641 agtgcaactg aaaaattcaa ggtcattaca acatttacca tcatcgcgga tatggccaaa
    11701 aacgtggctg gagatgctgc agaagtctca tccataacca agcctggtgc agaaattcat
    11761 gagtatcagc ctacccctgg cgatattaaa cgtgcacagg gggcacaact gattctcgcc
    11821 aatggtatga atctggaatt gtggttccaa cgcttttacc agcatctcaa tggggttcca
    11881 gaagtaattg tctcttcggg tgtgacgcca gtagggatca ccgaaggacc ctatgagggc
    11941 aaacctaatc cccatgcatg gatgtcgcca gataatgctc tgatttacgt cgataatatt
    12001 cgtgatgcgt tgataaaata cgatccggca aatgcacaaa cctaccaacg taatgccgat
    12061 acttataaag ccaagattac ccaaaccctt gcccccctgc gtaagcagat tacggaactc
    12121 cctgagaatc agcgatggat ggtcaccagt gaaggggctt tttcttatct cgcacgcgat
    12181 ttggggctaa aagagcttta tctgtggccg attaatgccg atcaacaagg aacaccgcag
    12241 caggtacgta aggttgttga tatagttaag aaaaatcata tcccggcagt ctttagcgag
    12301 agtacgattt ccgataaacc agcgcgtcag gttgcgcgtg aaaccggcgc acactacggc
    12361 ggtgtgctct atgtcgattc cctgagcaca gaaaacggcc cggtacctac gtatatcgac
    12421 cttcttaagg ttactaccag tacgctggta cagggaatta aagccgggaa aagggagaaa
    12481 taatgatgca atctgcaggc attgtcgtta atgatgttac tgtcacctgg cgtaacgggc
    12541 acacagcact gcgcgatgca tccttcacag taccaagtgg atctattgcc gctctggttg
    12601 gggtaaacgg ttccggaaaa tcgacgttgt ttaaagcgat tatgggattt gtgcgtctga
    12661 ccagcggaaa gatatctgtt ctgggtattc ccacgcgaca ggcgctacag aaaaacctgg
    12721 ttgcctacgt ccctcagtca gaagaggttg actggtcatt tcctgtactg gtggaagatg
    12781 tggtgatgat gggccgctat gggtatatgg gtatgttgcg tatagccaaa aagagggatc
    12841 gtcagattgt caccgatgcg ctggaacgtg tcgatatggt ggattttcgc catcgtcaaa
    12901 tcggcgagct ttccggtgga caaaagaaac gcgtctttct ggcgagagcg attgcacagc
    12961 agggtgatgt gatcctgctg gatgaacctt ttaccggcgt tgatgtgaaa accgaagcga
    13021 aaatcatcag cctgttgagg gagttacgcg cggaaggcaa aacgatgctt gtctcaacgc
    13081 acaatctcgg ctcagtcacg acattttgcg attatacggt catggtcaaa ggcaccgtcc
    13141 tggcaagcgg gccgacagac accactttta cagccgagaa cctggagctg gcttttagcg
    13201 gcgtactgcg ccatgtcaca cttaacggct cggaagaaag cattattact gacgatgaac
    13261 gcccttttgt ggcacatcga ccgtcagcgg tgcagaggga agcaagatga acgtgctact
    13321 ggaacccttc agctatgaat atatgctcaa tgcgatgtgg gtctcggcaa tggtcggcgg
    13381 tctctgcgct ttcctgtcat gctatctgat gctaaaaggc tggtcgctga ttggcgatgc
    13441 gctgtcgcac tctattgtcc cgggtgttgc gggggcatat atgctggggc ttccgttttc
    13501 tctgggagcc ttcttttccg gcggactggc agcgggcagc atgctgtttc ttaaccaacg
    13561 cacccgctta aaagaagatg ccatcatcgg cctgatcttc tcgtcctttt ttggcctggg
    13621 gctgtttatg gtgtcattga acccgacatc cgtgaacatt cagaccatcg tcctgggcaa
    13681 tattctggca atcgatccgg cggatatcct gcaactcact atcattggca ttctctcgat
    13741 catcgtgctt tttttcaaat ggaaagatct tatggtgacc tttttcgacg agaatcacgc
    13801 ccgtgctatt ggattacatc cgggcagatt aaaaatcctc ttcttcaccc tgctgtcggt
    13861 ttcgaccgtt gcggcgctgc aaacggttgg tgcctttctg gtgatctgtc tggtggtgac
    13921 tcccggtgca acagcatggt tgttaaccga tcgttttccc cgcctgctca taattgctgt
    13981 aactattggc agtgtaacca gtttcctcgg cgcgtgggtc agttactttc tggacggcgc
    14041 gacaggtgga atcatcgtgg tggcgcagac actgctgttt cttttagcat ttgtatttgc
    14101 gcccacccat ggacttttgg caaatcgtcg gcgtgcgcat aaagcgctgg aggatcgctc
    14161 atgatggcat tattactgga gccactgcag ttcaccttta tgagtcacgc actgctgatt
    14221 tcactggtag tttccatacc ctgtgcgctg ctgtcggtct ttctggtcct gaaaggttgg
    14281 gcactgatgg gtgacgcgat gagtcatgcg gtttttcctg gcatcgtgct tacctggatt
    14341 ctggggttac ctctggctac aggggcattc gtcgccggag tattctgcgc ggtggcgacg
    14401 ggatacctga aagacaacag ccgaatcaag caagatacag ttatggggat tgttttttct
    14461 ggcatgtttg ccgcaggtct gatcttgtat attgcaatca aaccagacgt acatcttgac
    14521 catattcttt tcggcgacat gctcgggata accatcggcg atataatcca gacggtgatt
    14581 attgccgggc tggttacact tgttattagc gtaaaatggc gggatttttt gctgttcagc
    14641 tttgattatc aacaggcgca ggtaagcggt ttgcatacga gatggctgca ttatgggctg
    14701 ctgtgcatgg tttccctgac cattgtggcg acgctgaaag cagtaggtat cattctctct
    14761 atttctctgc tcattgcgcc tggcgccatt gcagtactcc tgacacaacg ctttcatatt
    14821 gcgctcctac tggcgactgg catatcggta atagtgtcaa tgactggtgt ctggctgtcc
    14881 ttttttatcg acagcgcacc agctccgacg attgtcgtct tattcgcggt cgtgttcatc
    14941 atgacgttta ccgttaccag catcaacgca cgcacaaagg gaaacgccca tacacaggat
    15001 ctgttatcac ccaattagca caatatccga ggacagcatc gtccgccagc gtccgccagc
    15061 ctacagaagt tcggaaagcc atggaaggtc gttgggagga ggtacgaatt ctatcatgca
    15121 aaaaatacgt aaaatcgata acgcctagaa atcattcaat actcgcacta tcgaaagttt
    15181 accagccaac cgcggcacgt tcctgcatac gacgtgccgc agcttctgtt attccacgat
    15241 aaaattccta accgaattca aatccttcag actattcagc tcttccttca gctcccgctg
    15301 acggcgataa atcgtaagcg ccccgagaag tacgtagcgt aaggattatt ttacagacga
    15361 gaagttccag ggcagcagtt catgcacttg gttcgacggc cagtcattga gcttctcgat
    15421 cacttcgcgc aaccagtcct ccggctccac ttcgttctgt ttgcaggtga ccagcagact
    15481 gtagatgatc gccgcacttt ctcctccctt gtctgagccg aaaaagagat aattttttct
    15541 tccaaccgcc accgatcgta acgcgttttc accgatgttg ttgtctattt ccacccagcc
    15601 gtcacgacag aactcgttca gcgcattcca gtgattcagg atatagtcga acgccttcgc
    15661 catctccgca tgtttcgaca gcgttttcct ctgcaactgt atccagtcgt acaatgactg
    15721 catcaactgg acgcttctgg cttttctgac tgcaagccgt tcctctgccg gactgccacg
    15781 tatctccgct tctatgtcgt ataactctgc tatccgtctg agcgcttcct gagtcatttc
    15841 tgtcggacgg cgcacatcct cgtcatggat ttttcggcgg gcgtgggcca ggcacccggc
    15901 ttccttcacc cggcccgttt cgtacagtac gttataacct gcataggcat cagcctgcag
    15961 tacgccctga tactttgcca ggtggagctg cggatgttct cctttgcgat ctgccgaata
    16021 cgcgaaccag acggctgccg gcagggatga acccgcatta cgatcatccc tgacgtatac
    16081 ccacagacga cccgttttcg tctttccgtt ccccggggcg gttcattcag cacagattta
    16141 taaacctgct gaaactcggt ttcgtccata ttcgcaaacg agatggattt cgccctgcgc
    16201 ccacggctac cgtccggata aatatgctcg gtgtaaaatc cggcctgaat ggttacccac
    16261 tcgcggaaag cctcaaacga ctttagcaat gctgtatctc gggttctgcg tgtcgcaact
    16321 gtattcagat attgctctgc ggcttcgctc agagctggcg tatgttcccg gcctactgat
    16381 tcgcacaggt actcaacgaa gcctgatacc agttctcgtt cgcgaggcgt aatcgcccca
    16441 ccgatcggag tccagtaatc gaatcccagt tgcaggagtt tgaaaaaacg cttgtggaat
    16501 gcgtagttac gcacacgctt aaagtctgcg tgtatccact cacctgtttt gatttgatgc
    16561 agaaaatcgc aactctccgg cgtcgccggg agaagtaatc cggaagaggt ttgtttgatc
    16621 agttgtatat gcgccatcgg ctttctccgg tggcacggtg ttacacagca ggagttcaat
    16681 cctgctcaag attgtagatg agtttattct tcagcaaaag cagaaaacca gccttaaaac
    16741 caatctcttt caaaacccgt aatgatgtga caaattcgtc ctcacgcaaa ataaaaccgt
    16801 ccgtcagaag tccattacaa aaataaaata acacagcacc gctcttcctt tgttgagatt
    16861 gcaaacatct aatgcggcaa tggctgacaa tcgctccatt ctcaacgcgc acagcataga
    16921 ggccattttc actaaaaatt tcacgcaatt cttcgatttt catcttcaga atccttccag
    16981 ataaatagct ctcccctgtt cggggtccat ccctcttctc cctgcgcgct acttaagtga
    17041 gtcgattcta tctgcgaagg tgcgcgaatc aaattcaccg gaaataaaca acaaaaaacc
    17101 cgccgaaacg ctgagagatc acagcgatgg gcgggttaag tgcgggtgcg ttgaggatgc
    17161 ctgacacatc agaggtgggc ggggatggga tcagctcccc gcccggtcac tcttacttcc
    17221 tggattcgta gtctacgaag acagcgacct ccgtctggcc ggttcggatt cgtacctcac
    17281 agaggtcttt cctcgttacc agtgccgtca ctatgacggt taaacagatg acgatcaggg
    17341 cgattaacat cgccttttgc tgcttcatag cctgcttctc cttgcctttc ggcatgtaag
    17401 aggctaacct acatgtgcaa agcatgaaat tggcctcaga ttaatgttaa gcgtcttgcc
    17461 ggacgcgtaa tgttaactgg ggcttttctc tatctgcctt ttggtgttca tgcctgaagc
    17521 agatagcctc aagcacccgc agtcattcta cttacctcgc caatatgaaa tcaatcagaa
    17581 aggtgcccca taaaatcact ccttctcttc tttaccgtag tggagttgac caattttgat
    17641 aagagggcgt ccctgagatt tgcggtgtag attggtatcg cgcagagaat acacacagcc
    17701 acaatattcc tgctgataga atttttcgcg cttgctgatt tcaatcatac gggacgagcc
    17761 tccctgcttg cgccagttat aatcccagta caccatgccc ggataatgcg cgacggctcg
    17821 ccgcccacag tcgttaacct gctgcatatt tttccagcgt gaaatgccca gtgaactgct
    17881 gatcacactg aaaccatttt cagcggcgta cagcgctgtc cgctcaaaac gcatgtcaaa
    17941 acacatggtg caacggatcc ctcgttcggg ctcccattcc attcctttgg ctcgttcaaa
    18001 ccagttgtct gtgtcgtaat cagcatcaat aaacggcacg ccgtgttgtt cagcaaagcg
    18061 aatattctca tccttacgaa ttaaatactc tttctgagga tgaatgttcg ggttgtagaa
    18121 aaagatggtg tagtcgattc ccgaggcctg aagcgcctcc atcacctcac cggaacatgg
    18181 agcacagcaa gagtgcagta gtagtttgtt tgccccgttt gggagctcca atttgggccg
    18241 tttgaaatca gcaactgtca taaatatgtt tattggggtc ataaaaatat caaagagtgt
    18301 agcattagaa cggggctatc ggaaacagat gtgtgactgc tccccgccct ttcgg
//
LOCUS       DAJVUK010000081        17916 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.081, whole genome shotgun sequence.
ACCESSION   DAJVUK010000081 DAJVUK010000000
VERSION     DAJVUK010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17916
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.081"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            669..1034
                     /locus_tag="OQQ57_002488"
     CDS             669..1034
                     /locus_tag="OQQ57_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCS1957216.1"
                     /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            1074..1769
                     /locus_tag="OQQ57_002489"
     CDS             1074..1769
                     /locus_tag="OQQ57_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HCS1957217.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     VIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEG
                     VDHKVIDAFSPAG"
     gene            1836..3254
                     /gene="dcm"
                     /locus_tag="OQQ57_002490"
     CDS             1836..3254
                     /gene="dcm"
                     /locus_tag="OQQ57_002490"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-cytosine methyltransferase"
                     /protein_id="HCS1957218.1"
                     /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMAKGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            3235..3705
                     /gene="vsr"
                     /locus_tag="OQQ57_002491"
     CDS             3235..3705
                     /gene="vsr"
                     /locus_tag="OQQ57_002491"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VSPR family DNA mismatch endonuclease"
                     /protein_id="HCS1957219.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGSPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(3694..4614)
                     /gene="yedA"
                     /locus_tag="OQQ57_002492"
     CDS             complement(3694..4614)
                     /gene="yedA"
                     /locus_tag="OQQ57_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HCS1957220.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLMAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
     gene            4787..5704
                     /locus_tag="OQQ57_002493"
     CDS             4787..5704
                     /locus_tag="OQQ57_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HCS1957221.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDSLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKIRGQAH"
     gene            5783..5965
                     /locus_tag="OQQ57_002494"
     CDS             5783..5965
                     /locus_tag="OQQ57_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HCS1957222.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRSAEEV"
     gene            6136..7830
                     /gene="yedQ"
                     /locus_tag="OQQ57_002495"
                     /pseudo
     CDS             6136..7830
                     /gene="yedQ"
                     /locus_tag="OQQ57_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310721.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
     gene            complement(7827..8642)
                     /locus_tag="OQQ57_002496"
     CDS             complement(7827..8642)
                     /locus_tag="OQQ57_002496"
                     /EC_number="3.1.3.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
                     /protein_id="HCS1957223.1"
                     /translation="MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVI
                     LCSSKTSAEMLYLQKTLGLQGVPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQ
                     VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ
                     FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPND
                     APLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR"
     gene            complement(8940..9156)
                     /gene="yodD"
                     /locus_tag="OQQ57_002497"
                     /pseudo
     CDS             complement(8940..9156)
                     /gene="yodD"
                     /locus_tag="OQQ57_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
     gene            9319..9507
                     /gene="dsrB"
                     /locus_tag="OQQ57_002498"
     CDS             9319..9507
                     /gene="dsrB"
                     /locus_tag="OQQ57_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HCS1957224.1"
                     /translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGI
                     WFFNEAGHQDGIFVEKAE"
     gene            complement(9551..10174)
                     /gene="rcsA"
                     /locus_tag="OQQ57_002499"
     CDS             complement(9551..10174)
                     /gene="rcsA"
                     /locus_tag="OQQ57_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HCS1957225.1"
                     /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
                     SQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL
                     ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
                     QMNIKAKTVSSHKGNIKHKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
     gene            complement(10459..11244)
                     /gene="fliR"
                     /locus_tag="OQQ57_002500"
     CDS             complement(10459..11244)
                     /gene="fliR"
                     /locus_tag="OQQ57_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HCS1957226.1"
                     /translation="MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
                     GLAMMITFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
                     GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
                     GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGISLMAALMPLIAPFCEHLFSEMFNLLADIISELPLI"
     gene            complement(11253..11522)
                     /gene="fliQ"
                     /locus_tag="OQQ57_002501"
     CDS             complement(11253..11522)
                     /gene="fliQ"
                     /locus_tag="OQQ57_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HCS1957227.1"
                     /translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI
                     NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
     gene            complement(11532..12268)
                     /gene="fliP"
                     /locus_tag="OQQ57_002502"
                     /pseudo
     CDS             complement(11532..12268)
                     /gene="fliP"
                     /locus_tag="OQQ57_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310714.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly.; frameshifted; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
     gene            complement(12268..12633)
                     /gene="fliO"
                     /locus_tag="OQQ57_002503"
     CDS             complement(12268..12633)
                     /gene="fliO"
                     /locus_tag="OQQ57_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HCS1957228.1"
                     /translation="MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWQVKRLGF
                     APKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEI
                     PQTDFQSVMKNLLKRSGRS"
     gene            complement(12636..13049)
                     /gene="fliN"
                     /locus_tag="OQQ57_002504"
     CDS             complement(12636..13049)
                     /gene="fliN"
                     /locus_tag="OQQ57_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HCS1957229.1"
                     /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGG
                     GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMHRLSR"
     gene            complement(13046..14050)
                     /gene="fliM"
                     /locus_tag="OQQ57_002505"
     CDS             complement(13046..14050)
                     /gene="fliM"
                     /locus_tag="OQQ57_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HCS1957230.1"
                     /translation="MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQR
                     RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
                     NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
                     ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
                     LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL
                     KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
                     "
     gene            complement(14055..14519)
                     /gene="fliL"
                     /locus_tag="OQQ57_002506"
     CDS             complement(14055..14519)
                     /gene="fliL"
                     /locus_tag="OQQ57_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HCS1957231.1"
                     /translation="MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADD
                     KAQQRVVPSPVFYALNTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL
                     LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR"
     gene            complement(14624..15751)
                     /gene="fliK"
                     /locus_tag="OQQ57_002507"
     CDS             complement(14624..15751)
                     /gene="fliK"
                     /locus_tag="OQQ57_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook length control protein FliK"
                     /protein_id="HCS1957232.1"
                     /translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTD
                     KAAPQLLVATDKPTTKGEPLISDILADAQQADLLIPVDETLPVINDEQSTSTPLTTAQ
                     TMTLAAVADQNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKP
                     TLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPH
                     QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK
                     VDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ
                     QQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA"
     gene            complement(15748..16191)
                     /gene="fliJ"
                     /locus_tag="OQQ57_002508"
     CDS             complement(15748..16191)
                     /gene="fliJ"
                     /locus_tag="OQQ57_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FliJ"
                     /protein_id="HCS1957233.1"
                     /translation="MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLID
                     YQNEYRNNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWR
                     EKKQRLQAWQTLQERLSTAALLAENRLDQKKMDEFAQRAAMRKPE"
     gene            complement(16210..17578)
                     /gene="fliI"
                     /locus_tag="OQQ57_002509"
                     /pseudo
     CDS             complement(16210..17578)
                     /gene="fliI"
                     /locus_tag="OQQ57_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
     gene            complement(17578..>17916)
                     /gene="fliH"
                     /locus_tag="OQQ57_002510"
     CDS             complement(17578..>17916)
                     /gene="fliH"
                     /locus_tag="OQQ57_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707825.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HCS1957234.1"
                     /translation="ASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
                     PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE
                     LCRLAAPGVV"
BASE COUNT         4394 a         4480 c         4717 g         4325 t
ORIGIN      
        1 gccgtagaaa tcaactttat tgccatcttt attgtaaatt tcagccgcat ttgctgcgcc
       61 agcaactaat aacgccggga ccagcattgc cagaactttt cttttcatta tgtattccct
      121 tgtgattata atcttcatga atatatcaat aagtgccgtt atccaaaaaa aagcacattt
      181 ggatactatt ctatgaagtt catttcattt taagtattac atgcaacaaa tgtatttaaa
      241 aggtttcaaa atgtttctaa tctatttaat ataattcaga gatatgaatt ataaatattc
      301 atgaaaatta taaatgtata tcaatatgtt atgagttgag cggaaacata gggggtatca
      361 atgattgttg cgccaaacgg ctggtgtgat caggcgcaca ttaatgaagg cataaaaaaa
      421 agccggcatc atgccggccc aaaaaatata aacaagacga taaaaggcta ataacggaag
      481 catcatgaca cagaataata aaaaggtata attgtaatca gtgctaatat attgattaaa
      541 tgaattaata aagccgatat caaagataaa taaaatcgct caaaacgatt tttcctgtat
      601 tcactgccgt tgcgcaaaat ttatctattt gttcaaaaaa tgattgagtc ttgactggct
      661 catccaatgt ggaaaaatgt gacttttatc acataatagt actaagtctg aattttccgg
      721 gttatctcaa aatggaatac ggttcgacaa agatggaaga gagactctct cgcagccctg
      781 gcggcaaact ggctttgtgg gctttctata catggtgtgg ctatttcgtc tgggcaatgg
      841 cgcgttacat ctgggtgatg agccggatcc ccgatgcccc cgtgtcggga tttgaaagcg
      901 atttaggctc taccgcggga aagtggttag gggcactggt cggattttta tttatggctc
      961 tggtcggggc attgttaggc agcattgcct ggtacacccg acctcgtccc gcacgtagca
     1021 gacgctatga ataaaaactg ctaaggtggc gactctttgg caacggagcg cgtatggact
     1081 tacaacactg gcaggcacag ttcgaaaact ggttgaaaaa ccatcatcag caccaggacg
     1141 cggcccatga cgtgtgtcat tttcgccgcg tctgggctac ggcacagaag ctggcggcag
     1201 atgacgatgt cgatatgctg gtgattttaa ccgcctgtta ttttcacgat attgtgagcc
     1261 tggcgaaaaa tcatccgcaa aggcagcgtt cttcaatcct ggcggcagaa gagacgcgtc
     1321 gcctgctccg tgaagagttc gagcaatttc cggcggagaa aatcgaggcc gtttgtcatg
     1381 tcattgccgc tcacagtttc agcgcgcaaa tcgccccctt aacaacggaa gctaaaatcg
     1441 tccaggatgc ggatcggctg gaagccctgg gggcgattgg cctggcgcgc gtgtttgccg
     1501 tttcaggggc attgggcgtg gcgctgtttg atggtgaaga tccgttcgca cagcatcgcc
     1561 cgcttgatga taaacgctac gcgctggatc atttccagac taagttgctg aagctaccgc
     1621 aaaccatgca aaccgcaaga ggcaagcagc tggcgcagca caacgcgcat tttttagtcg
     1681 agtttatggc gaagctcagt gccgaactgg cgggggagaa tgaaggtgtc gatcacaagg
     1741 tgatagatgc gttttcaccc gcgggataag cgcgtggccc taaatggctg taattatgtt
     1801 aacctgtcgg ccatctcaga tggccggtta aatctatgca ggaaaatata tcagtaaccg
     1861 attcatacag caccgggaat gccgcacagg caatgctgga gaaactgctg caaatttatg
     1921 atgttaaaac gctggtggcg cagcttaatg gtgtgggtga gaatcactgg agcgcggcaa
     1981 ttttaaaacg tgcgctggcg aatgactcgg catggcaccg tttaagtgag aaagagttcg
     2041 cccatctgca aacgttgtta cccaaaccac cggcacatca tccgcattat gcgtttcgct
     2101 ttatcgatct atttgccgga attggcggca tccgtcgcgg ttttgaatcg attggcggac
     2161 aatgcgtgtt taccagcgaa tggaacaaac atgcggtacg cacttataaa gccaaccatt
     2221 attgcgatcc ggcgacgcat cattttaatg aagatatccg cgatatcacc ctcagccata
     2281 aagaaggcgt gagtgatgag gcggcggcgg aacatattcg tcaacacatt cctgaacacg
     2341 atgttttact ggccggtttc ccttgtcagc cattttcgct ggctggcgta tcgaaaaaga
     2401 actcgctcgg gcgggcgcac ggttttgcct gcgataccca gggcacgctg ttttttgatg
     2461 tggtacgcat tatcgacgcg cgtcgtccgg cgatgtttgt gctcgaaaac gtcaaaaacc
     2521 tgaaaagtca cgaccagggt aaaacgttcc gcatcatcat gcagacgctg gacgaactgg
     2581 gctatgacgt ggctgatgca gaagataacg ggccggacga tccgaaaatc atcgatggta
     2641 aacattttct gccgcagcac cgtgaacgca tcgtgctggt gggttttcgt cgcgatctta
     2701 atctgaaagc cgattttact ctgcgtgata tcagcgaatg tttccctgca cagcgagtga
     2761 cgctggcgca gctgttggac ccgatggtcg aggcgaaata tatcctgacg ccggtgctgt
     2821 ggaagtacct ctatcgatat gcgaaaaaac atcaggcgcg cggtaacggc ttcggttatg
     2881 gaatggttta tccgaacaat ccgcaaagcg tcacgcgtac gctgtctgcg cgttattaca
     2941 aagatggcgc ggaaatttta atcgatcgcg gctgggatat ggccaaaggt gagaaagact
     3001 ttgacgatcc gctgaatcag caacatcgtc cacgtcggtt aacgcctcgg gaatgcgcgc
     3061 gcttaatggg ttttgaagcg ccgggagaag cgaaattccg cattccggtt tcggacactc
     3121 aggcctatcg ccagttcggt aactcggtgg tcgtgccggt ctttgccgcg gtggcaaaac
     3181 tgcttgagcc aaaaatcaaa caggcggtgg cgttgcgtca gcaagaggca caacatggcc
     3241 gacgttcacg ataaggccac tcgcagcaaa aatatgcgcg cgattgccac gcgtgatacg
     3301 gcgattgaga agcgcctcgc cagtctgtta accgggcagg gcctggcgtt tcgcgttcag
     3361 gacgccagtc tgcccggaag cccggatttt gtcgttgatg aatatcgctg cgtgatattt
     3421 acccatggct gcttctggca tcatcatcac tgctatctgt ttaaagtgcc tgcgactcga
     3481 accgagttct ggctggagaa gataggtaaa aatgttgaac gcgatcgccg cgatatcagt
     3541 cgtttgcagg aactcggctg gcgcgtactg attgtctggg agtgtgcatt acgtgggcgc
     3601 gagaagctga cggatgaagc gcttaccgag cgtctggaag agtggatctg cggcgaaggt
     3661 gccagcgcgc agatcgacac gcaggggatt catttactcg cttgatgcgt cctgaataac
     3721 tggcgcaact acgggttttg ccgggaagag atattttccc aacgtgacca gtaccaccgc
     3781 gaagacaatt acgccgagcg ccagccattc aatcttcgac agcgtctctc cgcccagtcc
     3841 cgtacccagc aagaccgcga ccaccgggtt aacgtaggcg tagctggtgg cgagagccgg
     3901 actgacatta cggattaaat acatataagc gttgatggcg ataatcgaac caaacagcgc
     3961 cagatagccg accgcaagga agcctgaaag ggaagggagc gccgtcagtt tttcacctgc
     4021 aatcatcgac gcgatcatta acaccacgcc tgccgccagc atctcaatcg cacccgccat
     4081 catccctaca ggtaaggtaa tgcgcgagcc ataaaccgag ccaaacgccc agctaatcga
     4141 gccgattaaa atcagaatcg cgccccacgg attgccgctt aaatttccac cgctattgag
     4201 catgatgatt ccggcaagcc caatggcgat acccacccat tccaatttgc gcgttttaat
     4261 gccaaacagg cggctgaagc acagggtaaa gaggggcacg gttgcaacca caacggcggc
     4321 gatgccggaa ggaacatttt gatgctcggc aaccgtcacc atgccattac cgacagccag
     4381 caataacagg ccaatcagcg cggcattgag cagcggacgt agcgggggga gcttgtgtcc
     4441 gcgcagtagc aaaaatgcca tcaataaaat accggctgcc aggaatcgaa cgcctgccat
     4501 cattaacgga ggccagcttt ccacgccaat ccgaatgaca aaataggttg agccccaaat
     4561 gatatacaac gcaaacagcg cgccaaaaag cggtaacaac tggcggaaac gcataatccc
     4621 tcacggtgga aataaaaagg tggttcatag taaacgtgaa aatcattctg ctggcgagag
     4681 atataattgc atttgattgt taaaaaaatg ttgacctgtg aagcaagtat cagagctgcc
     4741 gtttttgctt catacttaca cccttcaaca ataaaaatga gagggaatgc ttttggccgg
     4801 gagtagttta ctgacgttgc tcgatgatat cgccacacta ctggacgata tctccgtgat
     4861 gggcaaactg gcggcgaaga aaaccgccgg tgtattaggg gatgacttat cgctcaatgc
     4921 gcaacaagtt tcaggcgtgc gggccaaccg ggaacttccc gtggtctggg gcgtggcgaa
     4981 aggatcgctg attaataaag tgattctggt gccgctggcg ctgatcatca gtgcgtttat
     5041 cccgtgggcg attacgcctc tgttgatgat tggtggcgcg tttctctgct ttgaaggagt
     5101 agagaaagtg ctgcatatgc tggaggcgcg taaacataaa gaagatccgg cgcagagcca
     5161 gcagcgtctg gagaagctgg cggcgcagga ttcgctgaag tttgaaaagg acaaaataaa
     5221 aggggcgatt cgtaccgatt ttatattgtc tgccgaaatc gtcgccatca cgctggggat
     5281 tgtggccgaa gcgccgttgc ttaatcaggt gctggtgctt tcaggcatcg cgctggtagt
     5341 gaccgtgggc gtctacggtc tggtaggggt tatcgttaag attgatgacc tggggtattg
     5401 gctggcggaa aaatccagcg cgctgatgca ggcattaggt aaagggttat tgatcattgc
     5461 gccctggctg atgaaagcgt tatcgattgt cggcacgctg gcgatgttcc tcgtcggcgg
     5521 cgggattgtg gtacatggta ttgcgccgct gcatcacgcc attgaacatt tcgctgggca
     5581 gcaaagtgca gtggtggcga tgatattacc gactgtttta aatctgattc ttggatttat
     5641 catcggcggc atcgtggtgc tgggagtgaa agccgtagcg aaaatacgcg gtcaggcaca
     5701 ttaatactcg cacaggctat tatgcaaaat tcgccatctt caactaaggt gaacaagttt
     5761 cactcgaaaa aaggaggcga gtatgagctt tatggttagt gaggaagtta cggttaaaga
     5821 gggcggcccg cggatgattg tcaccggata ctccagcggt atggttgagt gtcgttggta
     5881 tgacggttac ggggtcaagc gggaagcttt tcatgaaacc gagcttgttc cgggggaggg
     5941 gagtcgttct gcggaagaag tttgaaaggg tatcattaac accaggccgg atcacttccg
     6001 gcctggtgtg ccaatgcctg caatgaatga tagtcgcgtc ttatcatgcc accattataa
     6061 aattatcgct gttttgcggt acgctatcgc caggttatgc cagaatcata aaaaagcagg
     6121 ttgggagtcg tcagggtgca gcacgagaca aaaatggaaa accagagctg gttgaaaaaa
     6181 atcgcacgcc gcctggggcc tggtcatgtc gttaatctct gctttatcgt ggtattgctt
     6241 ttttccacct tgctgacctg gcgtgaagtg gtagtgctgg aagatgccta tatctccagt
     6301 cagcgtaatc atctggaaaa cgtagccaac gcgctcgata agcatttgca gtataacgtc
     6361 gacaaactga tctttttgcg taatggcatg cgcgaagctc tcgtagcgcc actggatttc
     6421 acttcactgc gtaatgctgt aaccgagttc gaacagcatc gcgacgagca cgcctggcaa
     6481 attgaactca accgacgacg caccctgtca gtcaatggcg tatcggatgc attagtcagc
     6541 gaggggaatc tcctgtctcg cgaaaatgaa agcctcgaca atgaaattac cgctgcactg
     6601 gaagttggtt acttgctgcg actggcgcac aacacctcgt cgatggttga acaggcgatg
     6661 tatgtctcgc gtgccggatt ttacgtttcg acgcagccga ccttgtttac gcgcaatgta
     6721 ccaacgcgtt attacggcta tgtcacccaa ccctggttta tcggccattc gcaatgagaa
     6781 aatcgtcacc gcgcggtacg ctggtttact tcgcaaccgg aacacgccag caatactgaa
     6841 ccgcaggtta ccgtcagtgt tccggtagac agtaataact actggtatgg cgtgctgggg
     6901 atgagtattc ccgtgcgtac catgcagcaa tttttaagaa acgccatcga taaaaacctc
     6961 gatggtgagt atcagctcta tgacagtaag ctgagatttt tgacctcttc caatcctgac
     7021 catccaacag ggaatatttt tgatcctcgt gaactggcct tgctggcgca ggcgatggaa
     7081 catgacacgc ggggcggcat tcgtatggac agtcgctatg ttagctggga acgtctggac
     7141 catttcgacg gtgtgctggt gcgcgtccat acgctaagcg aaggcgtgcg cggcgatttc
     7201 ggcagtatca gcattgcatt aaccctgctg tgggcgctct ttaccaccat gttactcatc
     7261 tcctggtatg tgattcgccg gatggttagc aacatgtatg ttctgcaaag ctcgttgcag
     7321 tggcaggcgt ggcacgacac cttaacccgt ttatataatc gtggcgcact gtttgaaaaa
     7381 gctcgtccgc tcgcgaaatt gtgtcagacg caccaacatc ctttttctgt cattcaggtc
     7441 gaccttgacc attttaaagc gattaatgac cgctttagtc atcaggcggg cgaccgtgtt
     7501 ctttctcatg ctgccggatt aattagcagt tccttgcgtg cgcaggacgt tgccgggcgg
     7561 gtcggtggtg aggagttttg tgtgattctg ccaggcgcga gtctgacgga ggctgcggaa
     7621 gtcgcagaac gtattcgcct gaagttaaat gaaaaagaga tgttgattgc taagagtacg
     7681 acgatacgca tcagtgcctc gttgggggta agtagcagcg aggaagccgg tgattatgat
     7741 tttgaacaac tccagtcact ggctgaccgt cggctttatc tcgctaaaca ggccgggcgt
     7801 aatcgggtat gcgcgagcga taacgcttaa cgagcggaga aaaaatggtc cagcccttca
     7861 cgccatcctt ccggtccttc acgctgcgtt cgccagacgc gggccggatc ctcatcatgc
     7921 agatgcaccc cttcacggtt tagccctttc acaatcaccg cgtaatccat tacctccagt
     7981 aagggcgcat cgtttggccc atcgcccagg ccaagtgtgg ttgggcgttt gcctgataat
     8041 tgttgatagg tcgcgataat ccagttggcg gcctgatctt ttccggcaga ggcatccagg
     8101 acgtgccaga agcgcgcacc ctgcataaac tgtaagccca gttcgttcag acgagcggta
     8161 aattgtgcca tacgctcgtc actgtcgcgc cagattagcg ttaccgacgc ctcatgcagc
     8221 tgcgtcagcg ccgcctggct acggcttaat cccgtccatt cggcgatggt tgcatcgtcg
     8281 acatcatcga aagtcgtgaa tttaaaatgt tctttctcgc gtagcgtatt taaaacctgg
     8341 ctgatttcgc catggctaat acctgagatg atgcgtggaa aaccgtctat atcctgccat
     8401 tgttcagcaa gctggatcac tgcgccattt tcggcaatca gtggtacccc ttgtaacccc
     8461 aacgtttttt gcaagtacag catttccgct gaagttttac tgctacagag aatgacggga
     8521 acattcgctt cgcgtaaacg gctgagccag ggggcagccg gttgccagtc ataactatga
     8581 ctgtccagca gggtgccatc aagatcgcta aaaaccagta gtggttgttg aattgaaaac
     8641 atggtcgcgc agttctcccc ttaccaggat gattctcaaa acagcacaaa taatcaaaga
     8701 tgattttttc gggagcgatc ccgttgacgc cagagccacc aaggggtgac gcacgtcaca
     8761 tttctattca taagtagcgt taatcattca tatcgcgaat attttcttgt cagcgaaaaa
     8821 aattgcggat aaggtgatga acacatcaga tttcctggtg taacgaattt tttaagtgct
     8881 tcttgcttaa gcaagtttca tcccgacccc ctcagggtcg ggattttttt attgtgcatt
     8941 caacgattca cttcagagac gctgaagtca tgaatatcca gttcgaaggc atccgccaat
     9001 tcacgccatg tatgatattc acgtccatcg acgctaacgt gttcagaatc gttctggctg
     9061 cgatgaactt atttcattga tcgccgccag cagggcatcg acatcgacgc tgacctcacg
     9121 ttttgcggta tcgctgtact cttttgcggt tttcatcatc tttcctcgca accgttactc
     9181 tgttgttgcc gccagtcgtt aagtccgcct ggcatctctt aagtatagac cgtcgagaaa
     9241 atcagcactc gcgcgcgcct ggcgctgcca gaaaaacgaa attgttctac actggcacaa
     9301 agccacagga ggaaaacgat gaaggtgaat gatcgggtaa cagtcaaaac ggatggcggt
     9361 ccgcgtcgtc ctggcgtggt actagcagtt gaggagttta gtgaaggcac aatgtacctg
     9421 gtttcgctgg aagactaccc gctcggcatc tggttcttta atgaagcagg gcatcaggac
     9481 ggtatctttg tggagaaagc agagtaatct tattcagcct gactggtggg aaaccaccag
     9541 tcagaatgtg ttagcgcatg ttgacaaaaa taccattagt cacattatcc gtcagtcgga
     9601 cgacatggta gataacctgt ttattatgcg ttttgatctt atgtttaata ttacctttat
     9661 gcgatgaaac ggtcttggct ttgatattca tttggtcaga gatttgaatg gttccctgac
     9721 ctgccatcca cattcgcaac atactcgatt cggttcggct caatgataac gtcggcatat
     9781 ttaaaaaaga ggttatcgtt gtctcttttt tcagaatatc gccaaggata tcgtcgagag
     9841 attccggttt aatcgattta gaacttatca ataaattttt tctgaccaat agatattcat
     9901 caaaatgaac attggcaatt gccataaaaa cgataaataa cgtattggga tgttgattaa
     9961 tgatgtgctt gatgtgctga ctgttagaag catcatggat gaaacagtcc tcattaataa
    10021 acaccactga agggcgctgt gaatcacaag ctatggcaag gtcatcaacg gtttcaatgt
    10081 cgttgatttc tcttttttta acccctctac tcaacagata cccggttaaa cctagtcggg
    10141 tgtaactaca taaatccata ataatcgttg acatggcata ccctcactca atgcgtaacg
    10201 ataattcccc ttacctgaat atttcatcat gactaaacgg aacaacatgg gtcacctaat
    10261 gcgccactct cgcgattttt caggcggact tactatcccg taaagtgttg tataatttgc
    10321 ctggaattgt cttaaagtaa atgttgcgat atgtgagtga gcttaaaaca aatatttcgc
    10381 cgcaggagta tcctggaaga tgttcgtagg tattattttt cggataatcc ttaggataac
    10441 atgataaacg ttacggaatt atattaatgg caattcacta ataatatcag ccagcaaatt
    10501 aaacatctca ctgaataaat gttcgcaaaa aggtgcaatt aacggcatta atgccgccat
    10561 taaagagata ccgacagtca gagttaatgg aaatccaata acaaaaatgg ataattgcgg
    10621 ggccatacga ttcagtaaac ctaatgccag attcagggtc agcagcagag taatgagcgg
    10681 taacgccagc atcagcccgt taaggaaaat caaactcccc gctttggtga gtgccagaaa
    10741 cgcattgctg ttcaacggtt cgccaccaat tggcagggtg tgaaaggtat cgaccagcag
    10801 tgaaatcaac cataaatgac cgttaaatgt caggaacagc agtaacgcca gcatatccat
    10861 gatacgcgct aaaacgggca tattgagatg gctggccgga tcgacaaacg tcgcaaatga
    10921 cagccccatt tgcagaccga taatttcgcc agcggttcgc acagcggcaa aggcaaattg
    10981 catggtaaaa ccaagcgcaa tgccgatcag gatctgctgc acggccagcc acagagcaaa
    11041 gaacgaaaaa acaggaacat cgttggcagg taatgatggg gcaatgacga acgtgatcat
    11101 cattgccagc cccagtttta cccgtttcgg cacgctgcgt tcgctcagaa ttggtgcggt
    11161 agaaatgagc gccagcacgc gcagtaacgg ccagaagtac aggcttaacc aggaaagcca
    11221 ttgatcgctt gtcacctgca tcattgtacg gcctacccga tgatatacgg caggttagtg
    11281 aacaaggtgc ggacgtaatc cagcaacaga ttgagcatcc acggtccggc aataataatg
    11341 gcaataaata cggcgatgat ttttggaata aacgacagcg tcatttcgtt gatctgcgtg
    11401 gcggcctgca aaatactgat gataaggccc gtgaccagcg ccaccagcaa cagcggggca
    11461 gccagtgcca gcgcgacttt catcgcttca gtccccatca tcatgaccga ttcaggtgtc
    11521 attttgcctc tctagctgta aaagctctgc gccagcgaac cgaccagcaa ttgccagcca
    11581 tccaccagta caaacagcat cagtttaaag ggcagagcaa tggtggcggg gggaccatca
    11641 tcatccccaa tgccatcaac acgctggcaa tcaccaggtc gataatcaaa aaaggaatga
    11701 aaatcgtgaa gcctatctga aatgcggttt tcaactcgct ggtcacgtag gccgggcgca
    11761 aaatgcgcat cggcacggct tcaggtccct gcaacgggcc ggtattcgct agtctggcaa
    11821 acaaccctaa atctgcctca cgggtctgac gcagcataaa ctcacgtagc ggctgcgccc
    11881 ctttttccag cgcctcctgc attgatattt tctcttcgct gaatggctgg tacgcatcga
    11941 cataaatttt gtcgatcacc ggtgacataa taaaaaaggt caaaaatagt gccagcccca
    12001 gcaatacctg gttaggtggc gcggagggcg ttcccagcgc gttacgcaat aaaccaaaaa
    12061 caatgatgat gcgggtgaaa ctggtcatca tcagtaaaat tgccggaata aacgtcaacg
    12121 aggtgatgaa caccagcgtc tgcaccggga gcgaccagct ttgtccaccg ccaggcagcg
    12181 gctggctggt gatacccggc agttgcgcga aggcgagggg cgtaaccagc cagagaagga
    12241 caggtgcgac agacaacaaa cgacgcatca ggatctccca ctacgcttaa gcaaattttt
    12301 catgaccgac tgaaaatcgg tctgcggtat ctcttctgtt ggtgctgaag ggggaagttt
    12361 atgcagcaga ttgatttgcc ctgcggtaac gccgagcacc agccgtgcat cttccacatc
    12421 gaccaccaca acccgttcac gcgcgcccag cgaagcactg gcgctaattt tcagaccgtt
    12481 aacgccagtg cgtttcgggg caaatcccaa ccgttttacc tgccaggcag cagcgaggat
    12541 cagggcaata atggcgatga gtgcgccgct gacctgcagc agtggcgcag cagaaaccgg
    12601 cgtggaagat tgcacagtag cgtggttatt catcactaac ggctcaggcg atgcattcgc
    12661 tcagacggag taatgatatc ggtgatccgc acgccatatt tatcggcaac gaccaccact
    12721 tcgccctggg cgattaaata accgttgatc agaatatcca gtggttcgcc cgccagaccg
    12781 tccagcgcca cgacggaccc ttgcgtcaga cgcaacagct ctttgatggt catccgcgta
    12841 cggcccagct cgacggtcag cttgaccgga atatccatta tcaggtcgat atcctgcaac
    12901 gttccgctga catcaccacc gccaaattgc tggaacaccg cgtcggcagc gcttttgctg
    12961 ctggttgatt tttgttcgct caacgcttca gcccacagat cgtccattgc gccgttgttg
    13021 tcatcggccg gattattcat gtcactcatt tgggctgttc ctcgttcaga gaatttaaaa
    13081 tcgggttaat caaatgttct atccgtaacg catactgacc gttgagagtg ccgtactgac
    13141 tggtcagcac cgggacgccg tcaacatggg cgatgatgcg atcaggtttt tctatcggca
    13201 ggacgtcgcc gggtttcagt tttaaaatct gcgacaggcg tagcgagata tcggcaaagt
    13261 tggcgaccag ctccagctgt gaatgctgca cctggcgcac caggttatcg cgccagttct
    13321 gatcttcatt acgcgagttt tccagcggcg ggttaaccaa caattcccgt agcggctcga
    13381 tcatgctgaa tggcagacag atattaaatt cgccggtcag gttgccaatc tccacatgga
    13441 acggcgtgtt aaccacaatg tcgttcggcg aggtggtgat attggtaaat ttcacctgca
    13501 tttccgaacg cacgtactca acttccagcg gattaatcgc cttccaggcg tcgctatagc
    13561 cttcaagcgc cagctttaac atgcggttga tgacgcgctg ttcggtatgg gtaaactcgc
    13621 gaccttccac tttggtcggg aagcgtccat cgccgccaaa caggttatcc acggcgataa
    13681 acaccagact cggtgaaaac accaccagcc ctgtgccgcg cagcggtttc agatggataa
    13741 ggttcaggtt ggtcggcacc ggcaggttgc gggcaaattc atggtacggc tgaatgcgga
    13801 tggccccgac ggttatatcc gggctacgac gcagcaggtt gaacagcccc atacgaaaat
    13861 ggcgggcaaa gcgctcatta atgatttcca gcgcctgcaa acgttcgcgc acaacccgtc
    13921 gttgggtatt cggatcgtac ggacgaatgt cactttcgcc gctaacactg gctgtcggtt
    13981 cgtctttgac ttcgctgtca ccattcaaca gcgcatcaat ttcagcttga gaaagaatac
    14041 tatcgcccat gtcgttatcg cagaataaaa gcggtataca gcacgtcggt gacatcctgt
    14101 ttcggttgcc cggcaacaag cggggtggaa agcgtggttt taatctcggc aatcaggttt
    14161 ttcttgcctt cttctgtcgc cagtacggca gcatcctgac gcgaaaacag taacagcaaa
    14221 cggctacgga cttccggcaa atactcactc agccgcgagc gggtagcttc atctttcagg
    14281 cgcagggtta tgccgatata aagcacgcga tccgcatcgc ccaaattgac cgtgaaggta
    14341 ttcagcgcgt agaagaccgg ggagggtacg acgcgttgct gcgctttgtc gtcagcggca
    14401 acctgatgcg aatgccagta gctgtaacct gcgctggcac aggccgcgag ggtaatgaat
    14461 accagaatcg ggatccaaag cgatcgcttg cttttcttgc ttatcgcgta atcagtcatg
    14521 tgttgcggtc ttcctgtgtc gctactgctt atcggctaat tatcctgcgt tttgagcgca
    14581 acaaagcggg gaaaagacgc ggattacggt gctacctctg acgttaggcg aaaatatcaa
    14641 cgccgctgtt gcctgttaca cgcccttgta aagagacggg aaccggaagc gtatcgtcgt
    14701 cttcccccgc cagaggttca tggtttactg tgcgttggct ttgctgttgt tgggaagcgg
    14761 cctgctgctg accactaaag ctttcgccac tgatgttgct ttgccctaac tgaatgccac
    14821 tttcggccag ctgcgtacgc agtaccggaa gcgctgcttc cagcgcggcg cgtacatgct
    14881 gatgcggtga aaccatctgg atttgcgcct ggttatcatc cactttgagg gagatttgca
    14941 cttcacctaa atcctgcggg tgcagacgca actctgcact ttgttgcccc tggcgggtga
    15001 acagcgaaat atgctggctt aatgattgtt gccattcgtg agaacccagc ggtgcactca
    15061 aaacaggcgc ggcgacggtg ggcagtggct gtgtctggtg tggagtaatt agcgggctgg
    15121 cggcagcggt caccggtgac ggtgtgctga tgacttccgc tttactctgg gcttctgcta
    15181 ccagcggtgt taatggctga gctggcgtgc cgggggcatc atcaggctgt gctgttgtga
    15241 gttgcgcaga agtcagtttt gtgaagagcg ttggtttctc tgccggtaac acggttgacg
    15301 gcacatcagt cactttgggc gtattgtcaa aacccggcaa catcgcaaaa agggcgctca
    15361 ggcttgcggt gacgtcttca ttcagatcat ccgctttttc gtcttttgtc gtattttggt
    15421 cagccaccgc agccaacgtc atcgtctgag cggtggttaa cggtgttgat gtggattgtt
    15481 cgtcgttgat gacaggcagt gtttcatcca cggggatcag taaatccgct tgttgcgcgt
    15541 cggcaagaat atcgctgatc agcggctcgc cttttgtcgt gggcttatct gttgccacca
    15601 gcaactgggg ggccgctttg tcggtagttg tctcgcctgc taatgcttcg ctcaacaacg
    15661 cgagaaaatc ttgtgcagca tcgctggctt tgccgccagg caatgtggtg gtgtcaacgt
    15721 cggcggtaat taagggcgct aagcgaatca ttcaggtttc ctcatggcgg cgcgctgggc
    15781 gaactcatcc atctttttct gatcgaggcg gttttctgca agcagtgccg ccgtggatag
    15841 ccgttcctgc agtgtctgcc aggcctgcaa acgttgtttc ttttctcgcc agctgttcag
    15901 ggcaatgtca actttctgcg tccactgatt aagttgctgg cgatgctgag taatggcttt
    15961 ttccagcgtc tggataaact gctgatagtt gatccagcgg ttgctggtca tcccggcact
    16021 catatcgctg ttgaggttat tgcgatattc attctgataa tcgatcagca ttttgagctg
    16081 ttcttccgcc tgctgacacc cgcgacgcat ttcacccagc aggcgcgcgg catcctctac
    16141 ctctttttct gccagatctt tcagggtcgc cagcgcgcca tgttctgcca tctgccgtta
    16201 tctcctgggt tatgacactg tcgggaaaat acgctccagc ccctggagag acgcttccca
    16261 gtccgcgcgt tcaaaaatgc cttgttgcaa atagccctcc agctgcggcc acagggcgat
    16321 ggctttgtcg agcatcggat cgctgccttt ggcatacgcg ccgacgctaa ccagatcgcg
    16381 gttacgctga aaactcgaca acagctgttt gaaggtgcgc actcgcgcgt aatgttgctc
    16441 actgatcaac gccgtcattg cgcggctgat cgacgcttca atatcgatag ccggatagtg
    16501 cccggcttcc gccagtcggc gagacagcac aatgtgaccg tcgaggattg cccgcgcaga
    16561 gtcggcaatg gggtcctgct ggtcatcgcc ttcagtgagc acggtataaa acgcggtaat
    16621 cgatccgccg ccgctaatgc catttccggc acgctcgacc agtgccggta atttggcaaa
    16681 caccgacggg ggataacctt tagtggcggg tggttcgcca atcgccagcg caatttcacg
    16741 ctgggccatc gcgtagcggg tgagggagtc cataatcagc aacacatgct gaccacgatc
    16801 gcgaaaatct tcggcaatgc gcgtggcata ggcggcaccc tgcattcgca ggagaggaga
    16861 aacatccgcc ggagcggcaa tcaccacgga gcgtgcacgc ccttcggcac cgaggatatt
    16921 ctcaataaaa tcttttactt cgcgtccgcg ttcaccaatc aaacccacga caatgacatc
    16981 ggcgcgggtg taacgtgcca tcatccccag cagcacactt ttaccaacgc cggacccggc
    17041 aaacagcccc atacgctgcc cacgcccaac ggtaagcagg gcattgattg ggcgcacgcc
    17101 ggtgtccagc acatgttcaa tcggtgtacg ttgcaacggg ttaaatggcg gggtaatcag
    17161 cgcaccggtt tccgtcgtat cgggggaggc catcgagcgg tttaccgctg ccgtccagaa
    17221 cacgacctaa taacgccgga ccgagcggta actgtttgcc gctttgcagc ccttctgccg
    17281 aaatgttttt ggcataaaca cgcgcgccgg gcaggacacc ttcgacttcc tccagcggca
    17341 ttaaaaacag ccgttgaccg ttaaagccaa cgacttcact ttctacttcg tgcgtttcag
    17401 tgccgttctg gcgctcaatc acacaggttg cgccgagcgg caattgtaat ccggtggctt
    17461 ccagcaccag cccggtagcg cgggttaatc gcccgtagcg acgtaccgca ggcaactgcg
    17521 ccattttggc ttcaaagtta tccagcgtgg ttagccagcg agtcaggcgc gtggtcatta
    17581 caccactcct ggtgctgcca gacggcagag ttcttgccag cgagtggcga cactggcgtc
    17641 gagatcgcct tcatcggcgg agactttaca gccgccagga tggagggtgg gatcgccccg
    17701 caagcgccag ccatgcaaac ttaaggtagc gccgagcata tcatccacac gttgcagatc
    17761 atccgggtgc acgcgcagct gtggtttacc gctgaataac ggttcttgct gcaacaactg
    17821 ttggatctgt ttgatgagtg ccgagttatc cactgttggc gtctgaccga tgacctgacg
    17881 tgctgcctcc agcgccatct gcatcaggcg cgaagc
//
LOCUS       DAJVUK010000082        17829 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.082, whole genome shotgun sequence.
ACCESSION   DAJVUK010000082 DAJVUK010000000
VERSION     DAJVUK010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17829
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.082"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..640
                     /locus_tag="OQQ57_002511"
                     /pseudo
     CDS             1..640
                     /locus_tag="OQQ57_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="involved in the stability of the curlin proteins
                     during assembly; involved in the secretion of the major
                     curlin subunit CsgA across the outer membrane; internal
                     stop; incomplete; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
     gene            complement(704..1195)
                     /locus_tag="OQQ57_002512"
     CDS             complement(704..1195)
                     /locus_tag="OQQ57_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HCS1957235.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(1297..1851)
                     /gene="ycdY"
                     /locus_tag="OQQ57_002513"
     CDS             complement(1297..1851)
                     /gene="ycdY"
                     /locus_tag="OQQ57_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone YcdY"
                     /protein_id="HCS1957236.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPL
                     ADTPADHIGTLLLAASWMEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            complement(1875..2612)
                     /gene="ycdX"
                     /locus_tag="OQQ57_002514"
     CDS             complement(1875..2612)
                     /gene="ycdX"
                     /locus_tag="OQQ57_002514"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding phosphatase"
                     /protein_id="HCS1957237.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMALIAEFADL"
     gene            complement(2667..3605)
                     /gene="ghrA"
                     /locus_tag="OQQ57_002515"
     CDS             complement(2667..3605)
                     /gene="ghrA"
                     /locus_tag="OQQ57_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HCS1957238.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
     gene            3839..3926
                     /locus_tag="OQQ57_002516"
     tRNA            3839..3926
                     /locus_tag="OQQ57_002516"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3873..3875,aa:Ser,seq:gga)
     gene            3971..4107
                     /locus_tag="OQQ57_002517"
     ncRNA           3971..4107
                     /ncRNA_class="other"
                     /locus_tag="OQQ57_002517"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(4198..4884)
                     /locus_tag="OQQ57_002518"
     CDS             complement(4198..4884)
                     /locus_tag="OQQ57_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016232851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HCS1957239.1"
                     /translation="MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSS
                     ATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDN
                     LEKWFGHYCHIHCQVSLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKI
                     VCVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPL
                     VAATKSEPVH"
     gene            complement(5465..6253)
                     /gene="phoH"
                     /locus_tag="OQQ57_002519"
     CDS             complement(5465..6253)
                     /gene="phoH"
                     /locus_tag="OQQ57_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HCS1957240.1"
                     /translation="MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMSGVEA
                     IGMARDSRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHK
                     DVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIG
                     KVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLP
                     RGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS"
     gene            complement(6875..8146)
                     /gene="efeB"
                     /locus_tag="OQQ57_002520"
     CDS             complement(6875..8146)
                     /gene="efeB"
                     /locus_tag="OQQ57_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HCS1957241.1"
                     /translation="MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGT
                     LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT
                     QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
                     TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA
                     ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ
                     FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN
                     PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE
                     EYVKPIGGGYFFSLPGVKDANDYLGSALLRV"
     gene            complement(8152..9279)
                     /gene="efeO"
                     /locus_tag="OQQ57_002521"
     CDS             complement(8152..9279)
                     /gene="efeO"
                     /locus_tag="OQQ57_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HCS1957242.1"
                     /translation="MTINFCRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM
                     TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
                     CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
                     IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
                     LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
                     SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
                     RTKDGFETYDKLTDADRNALKGPITAQAEDLAQLRGVLGLD"
     gene            complement(9337..10165)
                     /locus_tag="OQQ57_002522"
                     /pseudo
     CDS             complement(9337..10165)
                     /locus_tag="OQQ57_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309290.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            10201..10503
                     /locus_tag="OQQ57_002523"
     CDS             10201..10503
                     /locus_tag="OQQ57_002523"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957243.1"
                     /translation="MQRKVNRSDSDYHYGKEKYKRNVYKMMLECKQREVMPGDINDYS
                     RVERWDCLQRTMCSCRMPRKRHIQPTKLSRLNASELPCKTDKRVYQAISSIRDYQI"
     gene            complement(10834..12342)
                     /gene="putP"
                     /locus_tag="OQQ57_002524"
     CDS             complement(10834..12342)
                     /gene="putP"
                     /locus_tag="OQQ57_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HCS1957244.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(12501..12710)
                     /locus_tag="OQQ57_002525"
     CDS             complement(12501..12710)
                     /locus_tag="OQQ57_002525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957245.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            12765..16727
                     /gene="putA"
                     /locus_tag="OQQ57_002526"
     CDS             12765..16727
                     /gene="putA"
                     /locus_tag="OQQ57_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HCS1957246.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNCNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLENLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTYETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPR
                     EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQCNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELHKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGIQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS
                     DQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(16767..17405)
                     /gene="rutR"
                     /locus_tag="OQQ57_002527"
     CDS             complement(16767..17405)
                     /gene="rutR"
                     /locus_tag="OQQ57_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HCS1957247.1"
                     /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
                     HLIFIIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
     gene            17693..>17829
                     /locus_tag="OQQ57_002528"
     CDS             17693..>17829
                     /locus_tag="OQQ57_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HCS1957248.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     AL"
BASE COUNT         4474 a         4811 c         4371 g         4173 t
ORIGIN      
        1 ctacccggca agtaacttct ccactgctgt tccgcaaagc gccacggcaa tgctggtcac
       61 ggcattgaaa gattctcgct ggtttatacc gctggagcgc tagggcttac aaaacctgct
      121 taacgagcgc aagattattc gtgcggcaca agaaaacggc acggttgcca ttaataaccg
      181 aatcccgctg caatctttaa cggcggcaaa tattatggtt gaaggttcga ttatcggtta
      241 tgaaagcaac gttaaatcgg gcggtgttgg ggcaagatat tttgggatcg gtgcagacac
      301 gcaataccag ctcgatcaga ttgccgtgaa cctgcgtgtc gtcaatgtga gtaccggtga
      361 gatcctctcc tcggtgaaca ccagtaagac gatactttcc tatgaagttc aggccggggt
      421 tttccgcttt attgactacc agcgcttgct ggaaggggaa gtgggttaca cctcaaacga
      481 acccgttatg ctgtgtctga tgtcggctat cgaaacaggg gtcattttcc tgattaatga
      541 tggtatcgac cgtggtctgt gggatttgca aaataaagca gaacggcaga atgacattct
      601 ggtgaaatac cgccatatgt cggttccacc ggaatcctga cagataaaaa agccggaatt
      661 atcatccggc attttactgt ttaagcgaaa gcgtgagtgc ccctcacgct ttatttttga
      721 tttcctgctc acggtgagcc gtctttgcac tacgcgccgc cagccacagg ccgctgtttt
      781 tcattgcgta accaaatacc agcccaagcg ccagcgaagg taacaccagt ttccagtcac
      841 cctgcccggc aaacgtcgcg catgcgccta taaacgtccc cggaacaaat gaaagcagca
      901 gctgtttggc ctgaatacac atcagaaacg ccacaatacc ggttatgaca taaccgagaa
      961 tttccagatg tggtgccagt gcactaccgt aaataatgac catcgcccac accacgccac
     1021 taagcagggt tgcagcggag atcgccagcc ctttcagccc accttgcggg caggcaaagt
     1081 aggccgtaca gcccaggaag cccgcccagc ttagtaagcc cagggaaaca gccacccatc
     1141 cccagatacc ggagagaatg cctgttgtga ttgcaataga gagaagtatg ttcatgccgc
     1201 gcatgatagc agaaaacgcg gccatgaatg agatcgagca cacattttat gcaacaacaa
     1261 attatctgtt gcagttatga gtgacgatga tcacatttac tcttcagaat cttcttccag
     1321 ctcgtcccac attgcactaa tggcatcacg ggttagcggt gccatggtgc gccagaaagg
     1381 cgtggttgca tgggcctcca ctttgccgag gaacgcacca caccagggta acagatactc
     1441 actgaacagt gtttccagtg cttcgctctc atcttccgtt gactgatctt ccatccagga
     1501 agccgcaagc agcaatgtgc cgatgtgatc ggctggcgta tccgccagtg gcatccctcg
     1561 ttcggaaaga aaagcgcgca cttccgcttc cgttgcgtcc tcaacccatg cgctacgata
     1621 tggcggcacg gcacattcat cgccgataaa caacgcattg taatcggcag agacttgcgc
     1681 catatcacag cttttctgta aacgcgtcag taactcatcc tgctccagtg gccagttcgc
     1741 agccagtttc ccctcacgaa tcagggtaaa cagcggcacc agtaaaggat cttgcggttg
     1801 gcggtaatag agcgaaccca gcacacgaca gaggatagaa aactcgttca ttaatatatt
     1861 tccattacta gtaattaaag gtctgcaaat tccgcaatca gtgccatacc gcgagattca
     1921 aggaagttca gtaagcggcg cggagaaaca ttcaaaatgc gctctggcgg aaaatctacc
     1981 gcgtcgagga ttttaagaca ctcttcaaat tcccccatgg taaacgcggt gtgagaatcc
     2041 gagcctaatg ccacccaacc tccagcatca cgtaccgctg cggctaccgc acgacagttg
     2101 tcttcactgc ccttacgtga gtgtaaaaat gaagaattat tgatttccag cgccacctga
     2161 tgtttcgcgg ctgcttcagc aacggctttc acatctattt catatttggg atttccggga
     2221 tggcttatta tatgcacatt gccgctggcg atagtggcga tcatcgcttg tgtattggtc
     2281 gctttgtcat gtggtgcaaa aaccggctca tgaaaaccgg caataatcag atccagcgag
     2341 tcaaacattt taccgctgca atcaatttca ccatcaacat ttttaatgtt agcttcgatg
     2401 ccgcgcagga tccctacccc atcaaccact cgcggccaga tacgcatgtt aatgaagtgc
     2461 cagtgatgcg gagcatcttc catatccggg ccatgatcgg tgatcgcaaa aagtttaatg
     2521 cccttttgtt tggcctgggc aatgtaatca ctcaatgtgc tatatgcatg tgtgctggca
     2581 acggtatgca tatgaaggtc gacgggatac ataactctct cctgtattca attcccgcca
     2641 aggatagcag gaatcctgat gctttattag tagccgcgtg cgcggtcgac ttgcccgcag
     2701 accctctccc ctttttcgag ctgggcaatg gtgcgagaaa tgtactccac agcttcagcg
     2761 ggacgggtaa tcgcggcgac atgtggtgtt atcgtcacgc gtggatgttg ccagagcgga
     2821 ctttcaggcg gtaagggttc acgattaaaa acatccaaca ttgcgccttt aactttgccg
     2881 ctatccagcg ccgcgagcag gtcatcttcc acaacatgaa caccacgcgc caggttgagg
     2941 agatacgcgc catccggtaa tttttcgagt aattgttgat taataatgcc gacggtttca
     3001 ggggtattcg gtaacaaatt aatcaatacc cgacattggc tcagaaatgc agacagttct
     3061 tcccgtccgg caaagctttg cacgccaggc cacgatttac gggttcgact ccagcaacgc
     3121 agcggaaagc gccaggtttg cagactctga gcaactttac tgcccagtac gcctgcgccc
     3181 aaaatgccga tggtaaaatc ttcccaatga tattcaggca gcggttgcca atgcgaacta
     3241 ttttgctgga tgcgataatc gtcaaaacgt cgaaaccaat gcagcacctg actgacagca
     3301 tattcctgca tttgctcgcc cataccagta tcttccaggc gaaaaagtgg aacagaaggg
     3361 ttcagcattt cagggtgtgc ctgtagcttg ctcaaaatag aatcaacacc ggccccgagt
     3421 gcgaacaccg ctttaagatc gcgccctgcc agcatttcaa caggaggatg ccagactaaa
     3481 gcataatcag cagagtcatt atctccgctt ttccatgctc tgactcttgc ctgaggaata
     3541 gctttgcgca gtgcctcaat ccaccattgg gtatcgaacg ttgggtgata aaagatgata
     3601 tccatactga ctcccgaaaa gcgttgtgcg aaatttattc gcacttatcg ttatgatcta
     3661 caaaggccac cagcataaca aatccgtggt cggtggcaaa aaaagcagat ttcgcttatt
     3721 aaaaccacac attgattgaa gtttgaataa acgcgcgatt ttttcaaaaa gtttgttgac
     3781 ctcaggtcat gatttcccta aattagcgcc cgttccagca agacaggaac aacaatttgg
     3841 tgaggtgtcc gagcggttga aggagcacgc ctggaaagtg tgtatacggc aacgtatcgg
     3901 gggttcgaat ccccccctca ccgccatatt taaagaagag ctcgtacgaa agtacgggct
     3961 tttttttcgt atattgcaca caccgggggg atgagaagcc ccgaccgggg ttcgacaact
     4021 ggcgacagcc agttggacag accgtgaacg cagtgagcgg gctgcccgca gggcgagcga
     4081 agcgagtcaa tccccccctc accgccatct ttaaagaaga gctcgtacga aggtacgggc
     4141 tttttttcgt atattgcaca caccgggggg atgagaagcc ccgaccggga tacttagtta
     4201 atgcaccggt tcactctttg tcgccgcgac taatgggcga attttgtcac gagtctccca
     4261 gaccggagga atttcctcca atttagtgac agaagctcgt acaaaaggca cccgtgcaag
     4321 agtcataatt gtatccaacc aacggtcacg aataatgcga tccgcccttt catgactcgg
     4381 gtcatccagc tcaataacac agactatttt attgttcttc tttgaaacca gaacataatc
     4441 cattgccatg ccattataaa ttgcaaagaa acgctttctt tcttcttcgc taaactcagg
     4501 ttgttctgga aagttgatca agcgccccag agagacctgg caatggatat gacaataatg
     4561 tccaaaccat ttttccagat tatcgaaata cattttttca caacgagtga ttaaccactc
     4621 ttttctttcc aataaaatac cttcggcaac cattccctga aataactcat ctcgctcttg
     4681 ccaacgagag tcacgatagg ttttctgcgg tatatagctc cttgtcgacg ccttagcggc
     4741 aggggaagtt gcagatgaag ggacgggttg cgatttagcg atgattaccg atgaggcaac
     4801 ttttcggagt gtcaattttc tggcaacagc aaaaccggcg ataaatgcaa ttgtcaaaca
     4861 agttacaaaa gccataaagc tcataattaa ttttcaccta tccatgttga ttatatttca
     4921 ttaccaatgt tactcgctgc agcgtgttac atgccaacaa tgcaacgatc aatatatagt
     4981 tagtatcatg ttttgattat tacaaccatc cctatttagc cattgcggct tgccttccac
     5041 aaaaaaataa caacacacaa tattagcaaa gaattaatta agattaacct tacatttata
     5101 atattatccc taaagaataa atcagaggaa tatattcggt gttaaacagt cagtcaaagt
     5161 atagcccatt gttgattaaa cctcataagc aaaattggca ccagatctcc tgtacaggtt
     5221 gaatggccga aaaaagatag gcagatgctc atttttttgg cttctggaag aaaaactctc
     5281 cgcgctggca gtattacact ggtctgatgc tatgacgaaa aatgcctggt aagagtatct
     5341 aaaccagact ccagttcagc ttatcaacac gctcaaagtc gcccccctga acgctaacct
     5401 gaagtgaaaa tctgttgaaa taaaacaaag cccggttcgc ccgggctctg caccgataac
     5461 acacttaact gtatgcatgc agcgtacgtt ggcaaagtgc cgaacgtacg caatcctctt
     5521 ttccgaaccg gacgatccca accatttcat cttcttcgaa acgttccagc gcgtcactta
     5581 atccggagca cacgccgcga ggcaaatcgc attgcgtgat atcaccgttg acgataaccg
     5641 tcacgttctc cccgaggcgg gttaaaaaca ttttcatttg cgcggcagtc acattctgcg
     5701 cctcgtcaag aatgacgact gcattttcaa aggtacgtcc acgcatatag gcgaacggcg
     5761 cgatttccac cttccctatt tccggtcgca ggcagtactg cataaaggaa gcccctaagc
     5821 gccggaccag cacgtcgtag accgggcgaa aatagggagc aaacttttct gcgatatcac
     5881 caggtaagaa gccaagatct tcatcggctt gcagaactgg acgggtgacg ataatcctgt
     5941 cgacatcctt atgtatcagg gcctctgccg cttttgctgc gctgatccag gtttttccgc
     6001 acccggcttc gcccgtggcg aatatcagct gcttactctc aatagccttc agatagtgca
     6061 attgcgcttc atttcgcgcg aggatgggcg aggtatcgcg actgtcgcgg gccataccaa
     6121 tggcttctac gccgctcatc tgcacaagcg aggtgaccga ttcttcttca cgctgcttat
     6181 ggctgcgcga atcccgtctc agcacacgtt ttgcctcgcg acgagctttg atcactgctt
     6241 tttgtcttcc catggagagc accttgagtt gtttgtattc atcacacgcg ccgttggcag
     6301 cgcgattatg cgcacgaaca tcagagggtt ggcttccttg taagccatag tttgcttttg
     6361 gataaaatgc cgaaaaacgg ctacgcgcac cgtttacggc gtcggtaaca catgaaaaga
     6421 aaggatgagg ttgaaaatgc aaagtgacga gatgactacc ggaggagaaa actccgcgag
     6481 tggtggcgcg ttgattatct aaaacatgtc cagtacagga cgttaccatc cgcgatctcc
     6541 atagtgactg actatcactg ccgggaactt ccgctgctac ttaataagta caacagatct
     6601 cgcattttat tgcaacaata tatttactta tatttaacta taaaacacta tttcagtgac
     6661 attagtttct actggaaaga tgacagagtg atgacagtga tgaaaaaagc tgtgtgcttt
     6721 cagcaggatt tgcatcaggc atcagtgcac gatcgccgga tgcggcgtga acgccttatc
     6781 cagcctacca aacccgcact gattgtaggc atgataagac gcgcaagcgt cgcatcaggc
     6841 atctgcgcac aaatgcctta tccgcctaaa aacattaaac ccgcaataac gcgcttccga
     6901 gataatcgtt cgcgtccttc actcccggca gcgaaaaaaa ataaccgccg ccgataggtt
     6961 taacgtattc ctccagcgct tcgccattga gccttttttg tactgtcagg aagccttttt
     7021 ccagatcgtg ttggtagcag acaaacagca accccatatc cagttgtccg gagttggtga
     7081 cccccaacga ataactgtag ccgcgacgca gcatcaggct ggactcactc tccgccgtgc
     7141 ggggattcgc cagccggata tggctgtcca gcgcgatcac cttcccttcc gggtcgctgg
     7201 cgtaatcagg cacatcatgc tcatgctgca ttcccagcgg cgcaccggtt tgcttatcac
     7261 ggccaaaaat cgtctgctgt tctttcagcg gcgttctgtc ccaaaattcc actcgaaact
     7321 gaatcaagcg tactgcctga tagctgccac cgattgtcca cgcaggctcc tgctgatctg
     7381 ccgttaccca caccactttt tgcatcaact tatcattctg gctatcggga ttggcagtgc
     7441 cgtctttaaa gcccagcaaa ttaatcggcg tctctttgcc tttactacgc gctgcgtgat
     7501 cggaaataaa cccttcccgc ttccagcgca cgctgagcaa atccggcgtg tgtttgatga
     7561 tatcgcgcag cgcatggatc accgtgtcct gggtgttggc gcaaatttgt agcaacacat
     7621 caccatggca taacgccgca tccagcgagt cgttggggaa acgcgtcatc ttctgcaact
     7681 ttttcggcat ctgtggcgca aggccaaacc gctcatcaaa caatgagtga cccaccgata
     7741 acgtgatggt gagattatcg ggcgcaatgt agccgccaag aatgccggaa tcgagtggtg
     7801 gcaggcgcgg atttggcgtt tctggtgccg ctccgccctg agtcagaaaa gcaaaacgct
     7861 gagtcaacaa gcgaaacaac cgttcaagat cggctttatc gctggcaagc acatcaaacg
     7921 ccaccagcat cattgcggcc tgttgtggcg tcaggatccc tgcctgatgc tcaccataaa
     7981 acggctgttt ctcattgcgt gcatccggtg aaagcgtacc cggcgcactt tgcgtttttt
     8041 gtgcatgagc gaccggacaa cttcccgcca gcgccagcgc acctatcact ttcagtaaac
     8101 gtcggcgtga cggttcattc acgccgtttt catctttata ctgcataacg cttaatccag
     8161 tcccagcaca ccgcgaagtt gcgccagatc ttccgcctgc gcagtaatcg gtcctttcag
     8221 tgcattccgg tcggcatcgg tcaatttgtc gtaggtttca aaaccgtctt tagtacggta
     8281 tttcgccaga atggtatcga cctttttaaa gttggcatcg acttttgcca gcagttccgg
     8341 gttggctttt tgcagttgtg gacgcagcaa atcgacaatt ttctgcgagc cttcaacgtt
     8401 agcctggaaa tcccacagat cggtgtggct gtagcgatct tcttcaccgc taattttgct
     8461 ggctgccact tcctcaatca gtccggctgc gccgccgacc acttttgaag gtgggaaagc
     8521 cagttcactg atgcgttttt gcaaatcgac cacatctgta taaagctgct cagcgtactg
     8581 atccatccct ttggtggtgt tgtcgccaaa caatgctttt tccagacggt ggaaaccagt
     8641 gaattttggg tcggcggctt tttgctcgta atcatcttca cgggcgtcaa tgctgccatc
     8701 cagatcggag aacagttcag caatcggttc aatgcgctca tagtgctggc gcgtcggcgc
     8761 atacagtgct ttcgcttttt cgatatcgcc agctttaatc gcgtcggtaa aggctttggt
     8821 gtcggtcacc agctgcgtgg tttccgccat gacatacgct ttatatgcag taattgcacc
     8881 accaagactt aacagcgcat cactttgcgc cgcatccgcc gttgcctcac ctttgacgat
     8941 caacttccct ttcgggttag tcagcagacc gcaggtcata tcgtattcgc caggctgtaa
     9001 attcgccgtc attttctggc taaaaccagg ggcgatattt tcccgctctt ccaccaccat
     9061 cacgcctttg aggatctccc actccagcgc cttctggcta tggttctgaa taatgaactg
     9121 tgttttcccg gcgttaaccg taatggtcat cggttcgcac tgcttatccg tcacggtcac
     9181 tttgacctgc ggcacatcag cggcgttagc cataaaagca gaagaaaaca gcgcagccac
     9241 gctcaactgc aatgcgttac ggcagaagtt aatggtcatg acgagactat ccctttaaag
     9301 tatgttgtaa ctaagcaaga gtttgcgtcg tatttgttac gcggagcgag acgctgtcgc
     9361 ccctgcgcgt ggtggcagag caaatgccac cagcgccggg atgagataaa taaaccagac
     9421 ggcgacttcg ctgacgctcg gcgcttcctg atagccaaaa atcccttcca tcagcgtgcc
     9481 aaacagcgag tgagttgaga gcaccgcact catatcgaag gcgatttcct gaaagtggtt
     9541 ccacaatccg gcttcatgaa atgcgcgaat ggcaccagct gccagccctg cggcgacgaa
     9601 gagaataaac aggctggtcc atttaaaaaa tgcaccaaga ttgaggcgaa taccgcccca
     9661 gtagagcaga aagccgagca ccacggctgt agcaagaccg agcattgcac ccagcggcgg
     9721 ccagatcccg acatcttgtt gaaatgccgc cagcaggaaa aagaccgact ccagcccttc
     9781 ccttgcaacg gcaaaaaaga ccatcatcac cagcgcccag ccatgatgat ttccacgcta
     9841 caatgcgcta tcgactgcct gttccagttg cacttacgtt gcgcgacact ttgcgcatcc
     9901 agaaaaccat ccaggtaagg atcaccacgg cgatcaccgc cacgatacct tcaaacagtt
     9961 cctgttcttt ttgcggaaat tcgccggtgg tttcgttaat gaagatcccc aggcccaggc
    10021 acaacgcagc ggcaagcaac acgccaatcc acatcacacc aatccatcgg cctcgctggg
    10081 tacgcttaag atagctggca atcaaactga caatcagcgc ggcttcaagt ccttcgcgca
    10141 acataatgag aaacggaaca aacatgccac ccacccttaa acgtttttct gagtcaatct
    10201 atgcaaagaa aagtaaatcg cagtgatagc gattatcatt acggtaaaga aaaatacaag
    10261 cggaatgttt ataaaatgat gttggaatgt aaacaaagag aggtaatgcc aggggatata
    10321 aacgattatt ccagggtaga aagatgggat tgtttgcaaa gaaccatgtg ttcttgccgg
    10381 atgccgcgta aacgccatat ccagccgaca aaactgtcca gactcaatgc atcagagctt
    10441 ccatgtaaaa ctgataagcg ggtgtatcaa gcaatttcgt ccatccgcga ttatcaaatc
    10501 taactttttg cccggaacat aataacagct cgggtgttgg tggcgtcaaa atcgctgaag
    10561 cgttccccga aggccgggac agcccacatg gatgtgggct gagggcgcgt cttacaggac
    10621 gttacctcgc gcccgacccg gtagccgaag gggataagct gaaggtaccg cgcagcggcg
    10681 attttgttcg ccagagcccg ggggtgcaca gggggcggcg gcgattggcc gccccctgcg
    10741 cgctccctgc accattcaat ttatatggcg aggcacatta agggagcgca acccgctgct
    10801 gaagccaaac aaaaccgccg caggctaagt cccttagctt tcctgcaacc gtgacggcgg
    10861 agccgaatga tagtgcgcat cggcctcggc aaagcgtttt tgcatcgccg ctgacggcgc
    10921 tttacccagc aaactaaaca ctacaatccc gatactgccg aagatgaagc ccggaataat
    10981 ttcgtacagt cccagccagc cgaactgctt ccagacgata accgtcagcg caccgatgat
    11041 catccccgcc agtgcaccgt tacgcgtcat gcgtgaccac atcaccgaga acagcaccac
    11101 cggaccaaac gccgcgccaa agcctgccca cgcgtagctc actaagccca gcacgcggtt
    11161 ttccgggttt gccgccagcg caatcgccac cagcgccacc accagcacca tcacacgccc
    11221 tacccacacc agctctttct ggctggcatg tttacgcaga aacgctttgt ataaatcttc
    11281 ggtaatcgca ctggagcaca ccagcagttg gcaacttaag gttgacatta ccgccgccag
    11341 aattgccgac agcagaatcc cggcaatcca cgggttaaac agaatttgcg ccagttcgat
    11401 aaacacgcgc tcggcgttct ggtttaccgc gcctgctacc gccgggtgct cattaaagta
    11461 agcaatccca aagaagccga cagccaccgc ccctgccagg cagaggatca tccaggtcat
    11521 actgatacga cgcgcatgga caatgctgtg gtgagaatcc gccgccataa aacgcgccag
    11581 aatgtgcggc tgcccgaagt aacccagccc ccaacccatc agtgagataa tggcaacaaa
    11641 gttcagacct ttgagcatat caacgttttc gatgctcttt tgtttgatca cttccagcga
    11701 gtcaccaaag ccaccgacac tgataatgac gataaccggt gtcaggatca gggcaaaaat
    11761 catcaggctg gcctgtacag tgtcagtcca gctcaccgcg aggaaaccgc caataaaggt
    11821 gtaaaggatc gtcgccgcag ctcccgccca cagagccgtt tcgtagctca tgccaaaggt
    11881 actttcaaac agacgcgcgc ctgccacaat gcccgaagcg caataaatgg tgaagaacag
    11941 caaaataacc agcgcggaga taatgcgcaa aatgcggctt ttatcttcaa aacgcccggt
    12001 gaaataatcc ggcaatgtta aggcgttatt attgtattcg gtatgcacac gcaaccgccc
    12061 ggccaccagc ttccagttga tccacgcgcc taatgtcagg ccaatggcga tccagctttc
    12121 ggaaatcccg gaaagaaaaa ccgcgccagg caaccccatt aacagccagc cgctcatatc
    12181 cgacgcaccc gccgataatg ccgtcacaaa tggcccaaga ctacgaccgc ccagaatata
    12241 gtcgtcaaag tttttcgttg atcgccaggc gataaaccca atcaatatca tgccaaagat
    12301 atagacacaa aatgtcacca acatcggtgt gctaatagcc atctaaagtc tccaaaaaat
    12361 tattatcggc aatgtcgaaa cttgccgtta tatctgcaac cggaacgggg taacagagtt
    12421 tattttttac cagggcgacc gtatcctgcc ggaagcgctg gttattcaca atcgatttaa
    12481 cacaccattt acattaaatt ttagtgctca gcgacactat ttttcatcag gttgcactct
    12541 ctcacatttt ttgcggttgc acctttcaaa aatgttaact gccgcagaga aaaagtctga
    12601 gttatttttt taatccctgt catatcaatt tcttttatta acatttcatt catttttaag
    12661 cttgctacgc aggtcacatt taacatggtt gcacaaagtt gcaacatcat ggatatttca
    12721 cgataacgtt aagttgcacc tttcagaaca acaggagtaa tggcatggga accaccacca
    12781 tgggggttaa gctggacgac gcgacgcgtg agcgtattaa gtctgccgcg acacgtatcg
    12841 atcgcacgcc acactggtta attaagcagg cgattttttc ttatctcgaa caactggaaa
    12901 acagcgatac tctgccagag ctacctgcgc tgctttctgg tgctgccaat gagagcgatg
    12961 aagcaccgac tccggcagag gaaccacacc agccattcct cgactttgcc gagcaaattt
    13021 tgccccagtc ggtttcccgc gccgcgatca ccgcggccta tcgtcgcccg gaaaccgaag
    13081 cggtttctat gctgctggaa caagcccgcc tgccgcagcc agttgctgaa caggcgcata
    13141 aactggcata tcaactggcc gataaactgc gtaatcaaaa aaatgccagt ggtcgcgcag
    13201 gtatggtcca agggttattg caggagtttt cgctgtcatc gcaggaaggc gtggcgctga
    13261 tgtgtctggc ggaagcgttg ttgcgtattc ccgacaaagc cacccgcgac gcgttaattc
    13321 gcgacaaaat cagcaactgt aactggcagt cacacattgg tcgtagcccg tcactgtttg
    13381 ttaatgccgc tacctggggg ctgttgttta ctggcaaact ggtttccacc cataacgaag
    13441 ccagcctctc ccgctcgctg aaccgcatta tcggtaaaag cggtgaaccg ctgatccgca
    13501 aaggtgtgga tatggcgatg cgcctgatgg gcgagcagtt cgtcacgggt gaaaccatcg
    13561 cggaagcgtt agccaatgcc cgcaagctgg aagagaaagg tttccgttac tcttacgata
    13621 tgctgggcga agctgcactg actgccgcag acgcacaggc gtatatggtt tcctatcagc
    13681 aggcgattca cgccattggt aaagcgtcta acggtcgtgg catctatgaa ggtccgggca
    13741 tttcaatcaa gctgtcggcg ctgcatccgc gctacagccg cgcccagtat gaccgggtaa
    13801 tggaagagct ttacccgcgt ctgaaatcac tcaccctgct ggcgcgtcag tatgatattg
    13861 gtattaacat cgatgccgaa gaggccgatc gtctggagat ctccctcgat ctgctggaaa
    13921 atctctgttt cgagccggaa ctggcaggct ggaacggcat cggttttgtt attcaggctt
    13981 atcaaaaacg ctgcccgttg gtgatcgatt acctggttga tctcgccacc cgcagccgtc
    14041 gccgtctgat gattcgcctg gtgaaaggcg cgtactggga tagtgaaatc aagcgtgcgc
    14101 agatggacgg ccttgaaggc tatccggttt atacccgcaa ggtgtatacc gacgtttctt
    14161 atctcgcctg tgcgaaaaag ctgctggcgg tgccgaatct aatctacccg cagttcgcga
    14221 cgcacaacgc ccatacgctg gcagcgattt atcaactggc aggtcagaac tactatccgg
    14281 gtcagtacga gttccagtgc ctgcatggta tgggcgagcc actgtacgag caggtcacag
    14341 ggaaagttgc cgacggtaaa cttaaccgac cgtgtcgtat ttatgccccg gttggcacat
    14401 atgaaacgct gctggcgtat ctggtgcgtc gcctgctgga aaacggtgct aacacctcgt
    14461 ttgttaaccg tattgccgac acctctttgc cactggatga actggtcgcc gatccggtca
    14521 ctgctgtaga aaaactggcg caacaggaag ggcaaactgg attaccgcat ccgaaaattc
    14581 ccctgccgcg cgatctttac ggtcacgggc gcgacaactc ggcagggctg gatctcgcta
    14641 acgaacaccg tctggcctcg ctctcctctg ccctgctcaa tagtgcactg caaaaatggc
    14701 aggccttgcc aatgctggaa caaccggtag cggcaggtga gatgtcgccc gttattaacc
    14761 ctgcggaacc gaaagatatt gtgggctttg tgcgtgaagc cacgccgcgt gaagtagaac
    14821 aggcgctgga aagtgcggtt aataacgcgc caatctggtt tgccacgcct ccggctgaac
    14881 gcgcggcgat tttgcatcgc gctgccgtgc taatggaaag ccagatgcag caactgattg
    14941 gtattctggt gcgtgaagcc ggaaaaacct tcagtaacgc tattgccgaa gtgcgcgaag
    15001 cggtcgattt tctccactac tacgccggac aggtgcggga tgatttcgct aacgaaaccc
    15061 accgtccatt agggcctgtg gtgtgtatca gtccgtggaa cttcccgctg gctattttca
    15121 ccgggcagat cgctgccgca ctggcggcag gtaacagcgt gctggcaaaa ccggcagaac
    15181 aaacgccgct gattgccgcg caagggatcg ccattttgct ggaagcgggt gtaccccctg
    15241 gcgtggtgca attgctgcca ggtcaggggg aaaccgtggg cgcgcaactg acgggtgatg
    15301 atcgcgtgcg cggggtgatg tttaccggtt caaccgaagt cgctacgtta ctgcagtgca
    15361 atatcgccag ccgcctggac gctcagggtc gccctattcc gctcatcgct gaaaccggcg
    15421 gcatgaacgc gatgattgtc gattcttcag cactgaccga acaagtcgtc gtggatgtgc
    15481 tggcctcggc gttcgacagt gcgggtcagc gttgttcggc actgcgcgtg ctgtgcctgc
    15541 aagatgagat tgccgaccac acgttgaaaa tgctgcgcgg tgcaatggcc gaatgccgga
    15601 tgggtaatcc gggtcgcctg accaccgata tcggtccggt gattgatagc gaagcgaaag
    15661 ccaatattga gcgccatatt cagaccatgc gtagcaaagg ccgtccggtg ttccaggcgg
    15721 tgcgggaaaa cagcgaagat gcccgtgaat ggcaaagcgg cacctttgtc gccccgacgc
    15781 tgatcgaact ggatgacttt gccgaattgc acaaagaggt ctttggtccg gtgctgcatg
    15841 tggtgcgtta caaccgtaac cagctaccag agctgatcga gcagattaac gcttccggct
    15901 atggtctgac gcttggtgtc catacgcgta ttgatgaaac catcgcccag gtcactggct
    15961 cggcccatgt tggtaacctg tatgttaacc gtaatatggt gggcgcagtg gttggtgtgc
    16021 agccgttcgg cggcgaaggg ttgtccggta ccgggccgaa agcaggcggt ccgctctatc
    16081 tctaccgtct gctggcgaat cgcccggaaa gtgcgctggc agtgacgctc gcgcgtcagg
    16141 atgcagagta tccggtcgat gcacagttga aagccgcatt gactcagccg ctaaatgcac
    16201 tgcgggaatg ggcagcaaat cgtccagaat tgcaggcgtt atgtacgcaa tatggcgagc
    16261 tggcgcaggc aggaatacaa cgattgctgc cggggccgac gggtgaacgc aacacctgga
    16321 cgctgctgcc gcgtgagcgc gtgttgtgta ttgccgatga tgagcaggat gcgctgactc
    16381 agctcgccgc cgtgctggcg gtgggcagcc aggtactgtg gccggatgac gcgctgcatc
    16441 gtcagctagt aaaggcattg ccatcggcag tcagcgaacg tattcaactg gcgaaagcgg
    16501 aaaatataac cgctcaaccc tttgatgcgg tgatcttcca cggtgattcg gatcagcttc
    16561 gcgcattgtg tgaagccgtt gctgcgcggg atggagcaat tgtttcggtg cagggttttg
    16621 cccgtggcga aagcaatatc cttctggaac ggctgtatat cgaacgttcg ctgagtgtga
    16681 ataccgctgc cgctggcggt aacgccagtt taatgacgat cggttaaaca ggtagccgga
    16741 ggatgttaca ccctcctccg gcatctttaa cgtggtcgaa tcccctcaat aataatccgc
    16801 tgcacgtttt caaccgtttg attgaaaaat acctcatcgc gcaacgttgc gcctgtcacc
    16861 gcctccacct gaggggcgaa atcggcgtaa tgttgagtgg aagcccaaat aataaaaatc
    16921 aaatgctgcg gatcaatcgg cgcgagtttg ccgcttttga cccaaccggc aatcagcgcc
    16981 gatttctcat caattaatgc cttcaaatcg cccgtcagtt catccattaa cagcggcgcg
    17041 cctgccagca tctccataca gaacaggcgc gaagcctgcg gataatcgcg tgagacttcc
    17101 agcttcagac ggatgtactc tttgatcgcc gccagcgggg cgaaatcttc acgaaacgct
    17161 tttaacggtg ccagccagat atcgagaatc tgccgcagca cggcaatata cagcgcctct
    17221 tttgacggaa agtaatacag cagattggtt tttgaaacac ccgccaactc tgcgatctgc
    17281 tccagccttg tgccgtgaaa accgaattgt gaaaaagtgt ccagtgctgc gctaagaatc
    17341 gcttttttct tcgcgcttac tgcgcgcgaa cgtttacccg ttgttttcac tgcgccttgc
    17401 gtcatgcgct ctcccctctt gtagattggc aacaggatag caaaaccccc gcccggcctc
    17461 gaccttctgc actctcatcg cgcacggatg catgttttat gtgcaactgt tttgaccgtt
    17521 tagtccactt tttaccagat attttagata acacaatgct aacacattaa taacattcac
    17581 tttttaaaaa ctggcatccg ctttgcaaac aagccaatac gcggctgaaa aggatatgca
    17641 ggatgcagcg ccccgtctga ctttcacttt acgagacgaa gagaggttga tgatgaaaat
    17701 tggcgtattc gtacctattg gcaacaacgg ctggctcatt tcgacccacg cgccgcagta
    17761 catgccgacc tttgaactga ataaagccat tgtgcaaaaa gcggagcatt accatttcga
    17821 tttcgccct
//
LOCUS       DAJVUK010000083        17598 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.083, whole genome shotgun sequence.
ACCESSION   DAJVUK010000083 DAJVUK010000000
VERSION     DAJVUK010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17598
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.083"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..184
                     /locus_tag="OQQ57_002529"
     CDS             <1..184
                     /locus_tag="OQQ57_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957249.1"
                     /translation="KYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCVVTDSAEKAQ
                     SVTSVECTVTVSAAAG"
     gene            199..573
                     /locus_tag="OQQ57_002530"
     CDS             199..573
                     /locus_tag="OQQ57_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HCS1957250.1"
                     /translation="MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLW
                     QEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGP
                     VHARLLRQALELIADAESARKK"
     gene            669..878
                     /locus_tag="OQQ57_002531"
     CDS             669..878
                     /locus_tag="OQQ57_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HCS1957251.1"
                     /translation="MWMEFDRISPLGDERGDIRNAQIVKAVFGAQGMNVALKDVMLCW
                     GEDEDKPEVDPFAALEDALSFAAQS"
     gene            926..1186
                     /locus_tag="OQQ57_002532"
     CDS             926..1186
                     /locus_tag="OQQ57_002532"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957252.1"
                     /translation="MATLRELIIKIVSFRGTHIDAFFRRASSAAHTNARGLITVDLFC
                     CTEAIARQVPEAGSEVLSSVIASGREVLTRGLIAGDDVLTRE"
     gene            complement(1321..2922)
                     /locus_tag="OQQ57_002533"
     CDS             complement(1321..2922)
                     /locus_tag="OQQ57_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc49 family transposase"
                     /protein_id="HCS1957253.1"
                     /translation="MNIRIWSGILPCMDISALNTTNDIEKLRAMALAMVQEVMSENAE
                     KERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAGMQRSLFEEDVDADIAALTAHLD
                     KLLPQSPEEDEKASRSRPIRKPLPVHLPRVEKMIQPDTDHCPECDEPLHYIRDAVSEK
                     LEYIPAHFVVNRYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGDHL
                     PLYRQQQVFARSDVGLPVSSMADMVGAAGAALSPLAALLHRELINRPVVHADETTLKI
                     LNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENWLQGWGGTLVVDGHK
                     AYRTLANKVPEITLAGCWAHARRGFADLYKISKDPRAAIAVKKIAGLYRLEKKISSRP
                     VEKIRQWRQRYARPILEELWSWLEEQEPQCSPGKALHKAIAYALSHRVELSRFLEDGA
                     VPLDNNVCERAIKNVVLGRKSWLFAGSQMAGERAAQIMSLLETAKRNGLEPHAWLTDV
                     LMRLPEWPEERLAELLPLEGFTFSG"
     gene            complement(2929..3321)
                     /gene="tnpB"
                     /locus_tag="OQQ57_002534"
     CDS             complement(2929..3321)
                     /gene="tnpB"
                     /locus_tag="OQQ57_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1957254.1"
                     /translation="MLSPDNVFIAIKPVDMRRGIDSLTQYIQDELRSTWHEGAAFVFV
                     NKVRSRIKVLRWDKHGVWLCTRRLHKGSFRWPRANDAAWHLTPDEFNWLIAGVDWQQV
                     KGHDLTKWVWQNEPELRPENTKNTLLTQ"
     gene            complement(3308..3637)
                     /locus_tag="OQQ57_002535"
     CDS             complement(3308..3637)
                     /locus_tag="OQQ57_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001325657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HCS1957255.1"
                     /translation="MSKPRWTIEQKRQHVAAWRASGLTRQQYCELNDIPFTSLREWPQ
                     DVAKAERRANEPTVLPVHIAPPLHADVPQPVTNEPVTLFLPGGVRMCCQPSQLTDVFR
                     ALKYAQS"
     gene            3682..6942
                     /locus_tag="OQQ57_002536"
                     /pseudo
     CDS             3682..6942
                     /locus_tag="OQQ57_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304285.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
     gene            6935..7276
                     /locus_tag="OQQ57_002537"
     CDS             6935..7276
                     /locus_tag="OQQ57_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957256.1"
                     /translation="MAEIKTLHLVPREGMQVSEKPSVARVRFGDGYEQRRPTGLNARL
                     KTFQAVFRVTDEATRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYS
                     DFSCTIEQVVN"
     gene            7276..7974
                     /locus_tag="OQQ57_002538"
     CDS             7276..7974
                     /locus_tag="OQQ57_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HCS1957257.1"
                     /translation="MQDIHEESLSESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNE
                     KGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGAT
                     VVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG
                     ALFPGRIMLANTCMWTYRSDECGYTGGAVADEFDKPTTDIRKDRCSKCMRGCELRRNV
                     GNFGGFLSINKLSQ"
     gene            7985..8728
                     /locus_tag="OQQ57_002539"
     CDS             7985..8728
                     /locus_tag="OQQ57_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957258.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
                     GFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRR
                     THSVWRHRHWHASAFTGICNDLAAASACM"
     gene            8626..9306
                     /locus_tag="OQQ57_002540"
     CDS             8626..9306
                     /locus_tag="OQQ57_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000246273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HCS1957259.1"
                     /translation="MATTNAFCLASPPLARICLHGDLQRFGRRLSLYVNTAAEAIRAL
                     SMQMPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGL
                     QIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKA
                     KTPDYRATDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGK
                     VVVIGRQG"
     gene            9547..13020
                     /locus_tag="OQQ57_002541"
     CDS             9547..13020
                     /locus_tag="OQQ57_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HCS1957260.1"
                     /translation="MGKGGGRAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQS
                     ILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPESFESSGSETVLGVEVTRAKPVTR
                     TITSANIDRLRVTFGVQSLVETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTT
                     SQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNRTLWSSYTEIIDVKQCYPNTAIV
                     GMQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCL
                     WDMLTHPRYGMGKCLGAADVDKWALYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSAL
                     KDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTCRGQAHRAGLW
                     VIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRVLSIDAATRTLTLD
                     REVTLPETGTSAVNLINGSGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSL
                     RRRLFRCVSVRENTDGTFAITAVQHVPEKEAIVDNGARFEPQSGSLNSVIPPAVQHLT
                     VEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLP
                     LGEYTLTVRAINSYGQQGEPATTTFRINAPAKPATIELTPGYFQITAVPRLAVYDPTV
                     QFEFWFSEAKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAF
                     VEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEI
                     TQTVSKTLEDQSATIQQIQRVQKDTNDDLAALYMLKVQKTKNGIPYVAGIGAGIEDTD
                     GQPLSNILLLADRIAMINPEDGNTTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPT
                     FSLTPEGRLTARNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKA
                     FPRDSRAPERWPSGTVTVRIYDDQPFDRQIVIPAVAFSGAKHEREHTDIYSSCRLIVR
                     KNGAEIYNRTALDNTLIYSCVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVV
                     MKKATAGISIS"
     gene            13088..13687
                     /locus_tag="OQQ57_002542"
     CDS             13088..13687
                     /locus_tag="OQQ57_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HCS1957261.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLHARTNAPG
                     SDNLNGINVKYRYEFTDALGLITSFSYANAEDEKKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
     gene            13752..15159
                     /locus_tag="OQQ57_002543"
                     /pseudo
     CDS             13752..15159
                     /locus_tag="OQQ57_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001422246.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     gene            15245..15757
                     /locus_tag="OQQ57_002544"
     CDS             15245..15757
                     /locus_tag="OQQ57_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957262.1"
                     /translation="MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTM
                     GCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHF
                     LTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK
                     TGVPQDLKIS"
     gene            15833..16045
                     /locus_tag="OQQ57_002545"
     CDS             15833..16045
                     /locus_tag="OQQ57_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001114260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HCS1957263.1"
                     /translation="MPEKFFRTDADNNDVPMTAASWMALSEATEQAMFAKGVEINTRQ
                     LQMKAEVEALTDLKAIRSYVVGWPAG"
     gene            complement(16187..16511)
                     /locus_tag="OQQ57_002546"
                     /pseudo
     CDS             complement(16187..16511)
                     /locus_tag="OQQ57_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414822.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            complement(16647..16895)
                     /locus_tag="OQQ57_002547"
     CDS             complement(16647..16895)
                     /locus_tag="OQQ57_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HCS1957264.1"
                     /translation="MRIEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(17250..>17598)
                     /locus_tag="OQQ57_002548"
     CDS             complement(17250..>17598)
                     /locus_tag="OQQ57_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCS1957265.1"
                     /translation="SPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLR
                     RRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRI
                     ARVRSVEEILHAL"
BASE COUNT         4151 a         4239 c         5380 g         3828 t
ORIGIN      
        1 taaatacgcc tggaagaagg atggtcagcc ggttgacggg cagacgacag acaccttcag
       61 taagccaggt gcgcagtccg ctgatgcggg gaaatatacc tgcgtggtga ccgattcggc
      121 agagaaagca cagagtgtga cgtctgttga atgcaccgtg acagtgagcg cagctgccgg
      181 ataaggggat gggtcatcat gaaaaaggat ctgaaaacgc tggcgctggc cagactgtca
      241 gggtttcgtc ataaaacggt gaaggtgccg gaatggggga atgtcagcgt ggtgctgcgg
      301 gagccttcgg cagaggcctg gtatctgtgg caggaagtgc tcaatggtga tggagaggat
      361 gacgataccc tgtcggtggt ggcgaaaacc cgccgtaact tggaagcgga tgtgacgctg
      421 ttctgcgatg tcctgtgtga tacggacctg cagcgggtgt tcactccgga cgaccgtgag
      481 caggtgctgg ccgtctatgg tccggtacat gcccggttgc tgcgtcaggc actggaactg
      541 atcgctgatg cagagtcggc cagaaaaaag tagcccgccc ggaaattcgc tttctgatgc
      601 gacttgcgct ccgtctgggg cgcaccttat ccgaactgcg ccacagcctg agtgcgagcg
      661 aggcgatgat gtggatggag ttcgacagga tatccccgct gggtgatgag cgcggggata
      721 tccgtaatgc acagatcgtg aaagcggttt tcggggcaca ggggatgaat gttgcactga
      781 aggacgtcat gctctgctgg ggcgaggatg aggataagcc ggaggtggat ccgtttgcgg
      841 cgctggaaga cgcgctgagc tttgcagcac agtcatgaat gatgagaacc gctgaggcgg
      901 tttttttacg cccggagaaa ggtgaatggc gacgttacgt gaactgatta tcaaaattgt
      961 aagcttccgg ggaactcata ttgacgcgtt tttcaggcgc gcgtcatcgg cggcgcatac
     1021 gaacgctcgt ggtttgataa cggttgattt attttgttgc acagaggcga tcgccaggca
     1081 ggtaccggag gcgggctctg aagtactgag tagcgtgatc gcgtcaggcc gcgaagtact
     1141 gactcgggga ttaattgcag gtgatgatgt actgacccgg gaatgactcc gggctgattc
     1201 aggttcttat tcgctgtcag cccgcgtggt tgctggtctg gctcatttcc tgccgtcagg
     1261 agttcaactc ccgactgcag gttatggccc ggtgcacgaa cacctgacgg caggtatcac
     1321 tcacccggag aaggtaaatc cctcaagagg cagcaactct gccagtcgct cctccggcca
     1381 ctccggcaga cgcatcagga cgtctgtcaa ccaggcatgc ggctccagac cgttgcgttt
     1441 cgcggtttcc agcaagctca ttatttgcgc ggcgcgttct cccgccatct gcgaaccggc
     1501 gaacagccac gattttctgc ccagaaccac gtttttgatg gcccgttcac acacattatt
     1561 atccagcggc accgcaccat cttccaggaa gcggctcagt tccacgcgat gagacagcgc
     1621 ataggcaata gctttgtgta atgcctttcc cggagaacat tgcggttcct gctcttcaag
     1681 ccatgaccac agttcttcca gtatcggacg ggcataacgc tgtcgccact ggcggatttt
     1741 ttccacgggg cggctactga tcttcttctc aagacggtac aaccccgcga ttttcttcac
     1801 ggctatggca gcccgtggat ctttactgat tttatacagg tcggcgaagc ccctgcgggc
     1861 atgggcccag catccggcca gcgtgatctc cggcactttg tttgccagag tccggtaagc
     1921 tttatgtccg tcgacaacca gcgtcccgcc ccagccctga agccagtttt caggatactc
     1981 atggctacgt ccggtccggc agtcgaagca cacaactgac ggtcccgtcc tttctccact
     2041 gacgtatgcc cacagataac cggagcagga tttaccgcct ttcttcgtgt tcaggatctt
     2101 cagggtagtc tcatctgcat gcaccaccgg acggtttatc aactcgcgat ggagtaacgc
     2161 cgccagggga gataatgcgg cacccgccgc gccaaccatg tcagccatcg aactgacggg
     2221 cagcccgaca tctgaacggg caaagacctg ttgctggcga tacagaggca ggtggtcacc
     2281 gtatttattg atgatcacct gtgcgatgac tgatggctca acggcacttt tcgggaggat
     2341 atgtgccggc atttcaccgc tgaacacctt ctggcaacag ggacaactgt attgcggacg
     2401 gacataacgg ttcaccacaa agtgagcggg aatatactcc agcttttcac tcaccgcatc
     2461 gcggatatag tgcagcggct cgtcacattc agggcaatgg tcagtgtccg gctggatcat
     2521 tttttccacc cgtggaagat gaaccggtaa gggtttgcgt atcgggcgtg aacgggacgc
     2581 tttttcatct tcttcagggg attgcgggag cagtttatcc agatgtgcgg taagcgcggc
     2641 gatatcggca tcaacatcct cttcgaatag ggagcgttgc ataccagcca gcgtttcaca
     2701 tttttttccg aagcgctgtt gacgaaccag tttcagcatt tcttccagaa gctggatgcg
     2761 ccggcttttc tccagtaatt cccgctcttt ttcggcattc tccgacatga cttcttgtac
     2821 catggcaagt gccatagcac gcagtttttc gatgtcattc gtggtgttga gagcggagat
     2881 atccatacag gggagtatac cactccagat acggatattc attatttttc actgagttag
     2941 cagtgtgttt ttcgtgtttt cagggcgcag ttcaggttca ttctgccaga cccatttcgt
     3001 caggtcatgt cccttaacct gctgccagtc aacaccggca atcagccagt taaactcgtc
     3061 gggagtgagg tgccaggcag cgtcatttgc acgtggccag cggaagctgc ctttgtgcag
     3121 acggcgggta cacaaccaca ccccgtgttt atcccaccgg agaactttga tacgcgaacg
     3181 gactttgtta acaaagacga aggcggctcc ctcatgccat gtcgaccgga gttcatcctg
     3241 tatatactgc gtcagtgagt cgatgccccg gcgcatgtca acaggtttaa ttgcgatgaa
     3301 gacattatca ggactgagca tatttgagtg ccctgaagac atcggtaagt tgtgacggct
     3361 gacagcacat ccgtactcca ccgggaagga agagcgtgac tggctcattc gtgacgggct
     3421 gtggtacatc agcatgcagt ggtggcgcaa tatgaacggg aagaacggtc ggttcatttg
     3481 cccggcgttc agcttttgcg acatcctgcg gccattcgcg aagtgatgtg aagggaatat
     3541 cgttgagttc acagtattgc tgacgtgtaa gaccactggc gcgccaggca gcaacgtgct
     3601 gccttttctg ttcaatggtc catcggggtt ttgacatcga ttatctccgg taagttggtg
     3661 aatggatgtc ggtaatacta actgaccgaa gatccctgtg aagatgactt ccccgtaacg
     3721 acactcaaaa tttcggcaaa ttcacagtca ttccagtcgg agatccagcg ggcgtcccgt
     3781 atgggcagtg aatattaccg gaccctgcag aatggcggac gtcatgccgc tgctgccgca
     3841 cgggaacagc gccgcgccct tgcagaactg aacagtcagt tgacggaaat tcgcggttct
     3901 gctgtcggaa tggctggcgc atttgccggt gcctttgcca ccggacacct gatttcgctg
     3961 gccgatgagt ggggttccgt gaatgcccgt ctgaaacagg catctcagtc atcggatgaa
     4021 ttctcgtcat cacagaaagt gctgatggat atcagtcagc gaacaggtac cgcgttttcg
     4081 gataatgcgg ccctgtttgc ccgttcggct gcctcgatgc gtgaatatgg ttacagtgct
     4141 gatgatgtgc tgaaggtgac ggaggccatt tcgacaggac tgaaactgtc aggggctgga
     4201 gttgcggaat ccggttcggt gatcacccag ttcagccagg cactggcaca gggtgtactg
     4261 cgtggcgaag aatttaatgc tgttaacgaa aatggcgacc gggtgatccg cgcgcttgct
     4321 gcggggatgg gtgtggcccg taaagatctg aaggcaatgg cggatgacgg aaaactgaca
     4381 gcggataaag tggtccctgc gttaatcagc cagctgggga tattacgtga tgaatatgcg
     4441 gccatgccgg aaacggtttc cggtagtatc acgaaggtgg aaaacgcctt tatggcctgg
     4501 gtgggcgaag tgaatgaggc ctgcggggtg acaaaaacgc tctccggcgt gctgaacggt
     4561 gttgccggac agattgataa tgtggcaaca gctgtggggg cgctggttgc cgtcggggtt
     4621 gcccggtact ttggcaatat ggcctccgga gcgatgtctg ccacggcagg acttgtgacg
     4681 gctgcacgta atgaagttgc actggcggaa gcacagttca ggggaacgca gattgccacg
     4741 gcgcgggcaa gggcagccgt gtaccgtgct cagcaggccg tggcggcagc ccgcgggacg
     4801 gagatgcaga ttgctgcaga ggcccgtctg gcggccacac aggaacgcct gaacagaaat
     4861 attgctgcca gaagcgccgc ccagaatgcg ctgaacagta caacggcggt gggctcacgt
     4921 ctgatgagcg gtgcgctggg gctggttggt ggcgtacccg gactggtgat gctgggggct
     4981 gcagcatggt acacgctgta ccagaatcag gagcaggcct gggagtctgc gcgccagtat
     5041 gcactgacga tagatgaaat cgcgcataaa acgccgtcaa tgtctttgcc tgaagcctca
     5101 gataatgaag gacgaacacg ggcggcgctg acagagcaga accggctgat tgatgaatag
     5161 gctagtcggg tgaaatccct gcaggaaaaa atcgcaggat atcagtatgt tctggcgaac
     5221 ccgggctgga cgaccggtga cggattcatg ataaaccatc tgacctcggt gaagaccgta
     5281 acggaagggc ttgctcaggc aacagagcag cttgccgttg agcagtcccg tctggcactg
     5341 atgcaggaaa aagcgcagtc cattcaggat gtgcttgccg ggctggaaga ccgtcgtgtg
     5401 gcgttaattc gtcagcaggc ggcagagcag aataaggtgt accagtccat gctggttatg
     5461 aacggtcagc atacggaatt caaccgtctg ctggggctgg gtaatgaact gcttcagcag
     5521 cggcagggac tggtgaatgt gccgttacgg ctgccacagg ccactctgga tgataaacag
     5581 cagagtgccc tgacaaaaac agagcgtgag ctggccctgt ccagactgaa aggggaagaa
     5641 aaagagcgtg tccgactggg gtatgcggcg gatgacctcg gttttgtggg tgatccgtat
     5701 caggaggcga gacaacgtta tatcagtaat gccctggaag cctggcgcaa taacgaggcg
     5761 aataaaccca aatcccgggg tggaaaatca gagacggaaa aagcggaaga cagtttttcc
     5821 cggctgctga agcagcagaa agagcaactg gcactggcgg ggcagaatac agagctggcg
     5881 aagctgaaat accagactgc gcagggcgaa ctgaaaaccc tgacggagat gcagaagcag
     5941 gaactgctgc gcaatgcggc cctgattgac cagcaaaaaa tccgggagca gttgcggtcc
     6001 cgggaagaga ccctgaagaa tgataatgtg gctgctcgtg catcaaatga agcggaactg
     6061 ctggggtacg ggcagggaga gcggctccgt gaacgcatgc gggagttgca gcagatccgc
     6121 gacagtttcc gccagaagga tgcggacctt cagtctcagt atcagaccgg ggatatcagt
     6181 gaggattttt acagacaggc tctggcacag aacgcgcagt atctgagtga acgtctgaaa
     6241 gagcaggaag ccttttatgc cgaatcggat gtgcagcgtg cggactggca gaaagggctg
     6301 caggagggat tcagtaactg ggtggataat gcgtccgatt acgcctcaca ggcagcacag
     6361 cttgcgacgg agggtatctc agggatggtg aataacatca cggagatgct gaacggaaat
     6421 aaagtggaat ggcgcagctg ggcctcatca gtgctgcagg aaatatcaaa agttcttatg
     6481 aatgccgcga ttgtcaacgg gatcaagacg gcggcaaaca gtatgtccgg agcgggagga
     6541 tttatcggca gtattggtag ctggctgggc ggtgcggtgg ccaatgcaaa aggcggtgtg
     6601 tatacctcgg caaacctggg tgcgtacagc aacagtattg tggatacgcc cacgtacttt
     6661 gcctttgcaa aaggggcggg actgatgggg gaggccggtc ctgaagccat tatgcccctg
     6721 acccgggcgg cggatggctc gctgggtgtg cgagcggtgg gcagtatgaa cggcagtgca
     6781 ggtctggtgt attccccggt ctaccatatc gccattcaga atgacgggac taatggccag
     6841 atagggccgg aagctgcggg cagccttgtg caactgattg accagcgggt gcaggcggtg
     6901 atgctgtcca tgcgacgtga cggaggaatg ctgagtggct gagataaaaa cgctgcatct
     6961 ggtcccgcgt gaagggatgc aggtgagtga gaaaccgtcg gtggcgaggg tacggtttgg
     7021 tgacggttat gaacagcgcc gcccgacggg acttaatgcc cgactgaaga cgtttcaggc
     7081 ggtgttccgg gtgacggatg aggcgacccg gcgatggctg gaagagtttt tatcgtggca
     7141 tggtggttac cgtgcctttt tgtggcgacc gccgaaacat aaccggacgg tgagggtggt
     7201 atgccgggag tggagcgtca cagataacgc caggtacagt gatttcagtt gtacgattga
     7261 gcaggtggtg aactgatgca ggatattcac gaagaaagtc tgagcgagtc ggttaaatca
     7321 gagcagtcac cgcgggtggt actctgggaa attgacctga cggtgcaggg tggtgagcgg
     7381 tattttttct gtaatgagct gaatgaaaaa ggggagccgg tcacctggca ggggcgtaag
     7441 tatgaggcat acccgattga cggcagcggc tttgagatga acggccgggg cagcagtgcc
     7501 agaccgtcgc tgacggtgtc caatctgttc ggtctggtca ccgggatggc ggaagacctg
     7561 cagagtctgg tgggggccac ggtggtccgc cgccgggtgt atgcccgttt tctggatgcg
     7621 gtgaatttcg ttgcgggcaa tccggaggcg gacccggagc aggagctgag tgaccgctgg
     7681 gtggtggagc agatgtcgca gctgacagcc atgacggcct cgtttgtgct ggctacaccg
     7741 accgagacgg acggggcgct gtttcccggt cgtatcatgc tggcgaacac ctgtatgtgg
     7801 acctaccgct ctgatgagtg tggttacacg ggcggggctg tggcggatga gttcgataaa
     7861 cccaccacgg atatccgtaa ggacagatgc agcaagtgca tgcgcgggtg tgaactgcgc
     7921 aggaatgtcg gcaattttgg cggtttcctt tccattaata aactttcgca gtaaatcccg
     7981 atttatgaca cagactgaat cagcgattct ggcgcatgcc cggcggtgtg cgcctgcgga
     8041 gtcgtgcggc ttcgtgataa gcacgccgga gggggagcgg tatatccctt gtgtgaatat
     8101 ttctgcagag ccggaggcgt attttcgtat cgcaccggaa gactggctgc gggcagagat
     8161 gcagggggag attgtggcac tggtccacag tcatcccggt gagctgccct ggctgagcga
     8221 ggctgaccgg cggctgcaga taaaaagcgc actgccctgg tggctggtct gccgggggga
     8281 aattcataaa ttccgctgtg tgccacatct gacaggacgg cgctttgagc acggggtgac
     8341 ggactgttac acgctgttcc gggatgcata ccatctggcg ggaattgata tgccggattt
     8401 tcatcgcgag gatgactggt ggcgcaacgg ccagaacctg tacctggaca atatggcggt
     8461 caccggcttt taccgggtgc ccctgtcctc tgcaccgccg ggcgatattc tgctgtgctg
     8521 ctttggtgct tcggtaccga accatgccac catttactgc ggcaacggtg agctgcttca
     8581 ccatctgcct gaacaactga gtaaacggga gaggtattcc gaaaaatggc aacgacgaac
     8641 gcattctgtc tggcgtcacc gccactggca cgcatctgcc ttcacgggga tttgcaacga
     8701 tttggccgcc gcctcagcct gtatgtgaac acggcagcgg aagccattcg cgccctgtcg
     8761 atgcagatgc cgggctttcg ccgtcagatg aacgaaggct ggtaccagat acgtattgcc
     8821 ggtgatgaca cggcaccgga ggcggtgtat gcccgtcttc acgaacagct gggtgaggga
     8881 acggtcatcc acattgtgcc gcgactggcc ggggccggaa agggtggact gcagattgtg
     8941 ttgggggcgg cagccatcgt gggctctttc ttcactgccg gggcatcaat ggcgttatgg
     9001 ggttcagccc tggcagccgg tggtttttct gccaccacga tgctgttttc acttggagcc
     9061 agcatgattc tgggcggtgt ggcccagatg ctggccccga aggcaaaaac accggattac
     9121 cgcgcaacgg ataacggcag acagaacacg tacttttcct cgctggataa catgattgcc
     9181 caggggaacc cgatgccggt gccttacggg gaaatgctgg ttggctcccg ccgtatatcc
     9241 caggacatca gcacccgtga tgaaggcggg ggcggaaagg tcgtggttat cgggcgacag
     9301 ggataaaaca taaaaaaatc ccgcagtgat cgcggagctg cggggacaga caaatgaaga
     9361 tcaatgtgaa ggagttgttt ttgttactcg ggcaaaaaaa cactaacgca gcgaaattat
     9421 aagcgccaca gtcagtgtgt gaaaatgtga agatattcag aaattttatt ccgtcatgac
     9481 gcaggcaccc ggtgaggtgc ctgttgtttt tgtgagtgaa caattatcac ggtaagaggt
     9541 gatgtaatgg gcaaaggtgg cggcagggcg cacacaccgc gtgaggcgaa agacaatctc
     9601 aaatccacgc agatgatgag cgtgattgat gcgattggtg agggaccgat agaaggcccg
     9661 gtgaaaggcc tgcagagtat tctggtgaac aaaaccccgc tgacggacac ggacggtaat
     9721 cccgtgatac acggtgtgac cgcggtctgg cgtgccgggg agcaggagca gacaccaccg
     9781 gaaagctttg agtcctccgg ctctgaaact gtactgggtg tcgaagtgac cagggcaaaa
     9841 ccggtaacac gcaccattac gtcagcgaac attgaccgcc tgcgggtgac cttcggggtg
     9901 cagtcactgg tggagaccac gtcaaagggt gaccgtaatc cgtcctctgt ccgtctgctg
     9961 attcagttac agcgtaacgg taactgggtg acagaaaagg atgtcaccat taacggcaag
    10021 accacctcac agttccttgc gtcggtgatt ctggataatc tgcctccccg cccctttaac
    10081 atccggatgg tcagggagac ggcggacagc accacggacc agctgcagaa cagaacgctg
    10141 tggtcgtcat acaccgaaat catcgatgtg aaacagtgct acccgaacac ggccattgtg
    10201 gggatgcagg tggatgcgga gcagtttggt ggtcagcaga tgacggtgaa ctaccatatc
    10261 cgcggtcgca tcatccaggt gccgtcaaac tatgacccgg aaaaacgcac gtacagtggt
    10321 atctgggacg gcagtctgaa accggcatac agcaacaacc cggcctggtg cctgtgggac
    10381 atgctgactc acccgcgcta cggcatggga aaatgtctgg gggcggcgga tgtggacaag
    10441 tgggcgctgt atgccatcgg gcagtactgc gaccagacgg tcccggatgg tttcgggggg
    10501 accgagccgc ggatgacctt taatgcgtac ctggcacaac agcgtaaggc gtgggacgtt
    10561 ctcagtgatt tctgctctgc gatgcgctgt atgccggtat ggaacggtca gacgctgacg
    10621 ttcgttcagg accgcccgtc ggatgtggtg tggccgtaca ccaacagcga tgtggtggtg
    10681 gatgataacg gcgtgggatt ccgctacagc ttcagtgccc tgaaggaccg gcacacggcg
    10741 gtggaggtga attacaccga cccgcagaac ggctggcaga cctccacgga actggtggaa
    10801 gacccggaag ccatactgcg ctacggacgc aacctgctga agatggatgc gtttggctgt
    10861 acctgccgcg gtcaggctca ccgtgcaggt ctgtgggtga taaagaccgg actgctggaa
    10921 acgcagacgg tggacttcac gctcgggtca caggggctgc gtcacacacc gggtgacatt
    10981 attgaaatct gtgataacga ctatgctggg actatgaccg gcggacgtgt cctgtccatt
    11041 gatgctgcca cccgcaccct gacgctggac cgtgaggtta ccctgccgga gacaggtaca
    11101 tcggcggtga acctgattaa cggcagtggt aagccggtga gtgtggacat caccgcacac
    11161 cccgcgccgg accggataca ggtcagtacc ctgcctgatg gtgtggagac atacggggtg
    11221 tggggactct ccctgccgtc actgcgccgt cgcctgttcc gctgtgtctc cgtccgggaa
    11281 aacacggatg gcacctttgc catcacggcg gtgcagcacg taccggaaaa agaagccatc
    11341 gtggataacg gtgcccgctt tgagccgcag tcaggctccc tgaacagcgt catcccaccg
    11401 gcagtgcagc acctgacggt ggaggtgagc gcagctgacg gccagtatct ggcacaggcg
    11461 aaatgggaca cgccgcgggt ggtgaagggg gtgcgcttca gtctgcgact gaccagcgga
    11521 agcggagaag acagccgtct ggtgaccacc gctatcactg cggatacaga gcatcgtttc
    11581 agtggtctgc cgctcgggga atacaccctg acagtcaggg caattaacag ttatggccag
    11641 cagggcgaac cggccaccac caccttccgg attaacgcgc cagcaaaacc cgccaccatt
    11701 gaactgacgc cggggtattt tcagataaca gcggtaccgc gtcttgcggt gtatgacccg
    11761 acggtacagt ttgagttctg gttttcggag gcaaaaatcg cagacacatc tcaggtggaa
    11821 acctctgccc gttatctggg gaccggcagt cagtggagtg tatccggccc gcacattaag
    11881 cccgggaagg atttctggtt ttacgtgcgc agcgtcaacc tggtggggaa atctgctttt
    11941 gtggaggcca gtggacgggc cagcaatgat gcagaagggt atctggggct gtttcgggaa
    12001 aaaataggaa aactgcatct ggctcagggg ctgtgggagc tgatagacaa cagccagctt
    12061 gcggatgaga tggcggagat gaagaccacc atcaccgaaa cccgcaatga aatcacacag
    12121 acggtcagta aaacgctgga ggaccagagc gccaccatac agcagataca gcgcgtgcag
    12181 aaggacacaa atgatgacct tgctgcactt tacatgctga aggtacagaa aacaaaaaat
    12241 ggcataccct atgttgccgg tattggagcg gggattgagg atactgatgg ccagcccctg
    12301 agcaacatac tgctgctggc tgaccgtatt gcgatgatta acccggagga cggcaacacc
    12361 acgccgttat ttgtggcgca ggggaatcag ttgttcatga acgatgtgtt cctgaagcgg
    12421 ctgtttgcgg tgagtatcac ctcgtccggc aatcccccga cgttttccct gacgccggag
    12481 ggcaggctga ccgcaagaaa tgctgatatc agcggtaacg tgaatgcgaa ctccgggacg
    12541 ctcaacaacg tcacgattaa cgagaactgc cgggttctgg gaaaactgtc cgcgaaccag
    12601 attgaaggcg atctcgttaa aacagtgggt aaggcttttc cgcgggactc ccgggcaccg
    12661 gagcggtggc catcagggac cgttaccgtc aggatttatg acgatcagcc ttttgaccgg
    12721 caaattgtta ttccggcggt ggcattcagc ggcgctaagc atgagagaga gcatactgat
    12781 atttactcct catgccgtct gatagtgcgg aaaaacggtg ctgaaattta taaccgtacc
    12841 gcgctggata atacgctgat ttacagttgc gttattgata tgcctgccgg tcacggtcac
    12901 atgacgctgg agttttcggt atcagcatgg ctggtgaata actggtatcc cacagcaagt
    12961 atcagcgatt tgctggttgt ggtgatgaag aaagccaccg caggcatcag tatcagctga
    13021 attttataac ccatatacgg gcgccagaaa tggcgccttt tttattgcag aaaagcgaga
    13081 ggtaattatg cgtaaagttt gtgcagccat tttgtccgca gccatctgtc tggctgtatc
    13141 cggtgcgcct gcatgggcgt ctgaacatca gtccacactg agcgcggggt atcttcatgc
    13201 ccgtacgaac gctcccggca gcgataatct gaacgggatt aacgtgaaat accgttatga
    13261 gtttacggac gcgctggggc tgattacgtc cttcagttat gccaatgctg aagatgagaa
    13321 aaaaacgcac tacagcgata cccgctggca tgaggattcc gttcgtaacc gctggttcag
    13381 cgtaatggcg gggccgtctg tgcgcgtgaa tgaatggttc agcgcgtatg cgatggcggg
    13441 tgtggcttac agccgtgtgt cgactttctc cggggattat ctccgcgtaa ctgacaacaa
    13501 ggggaaaacg cacgacgtgc tgaccggaag tgatgacggt cgccacagca acacgtctct
    13561 ggcgtggggg gctggcgtgc agtttaaccc gaccgaatcc gtggccattg atattgctta
    13621 tgaaggttcc ggcagtggcg actggcgcac tgacggtttc atcgtgggtg tcggctataa
    13681 attctgatta gccaggtaac acagtgtcat gacagcccgc cggttcaggc gggctttttt
    13741 gtggggtgaa tatgacagta aagatttctg gtgtactgaa agacggcaca ggaaaaccgg
    13801 tacagaactg cacaatccag ctgaaagcaa aacgtaacag taccacggtg gtggtgaaca
    13861 cgctggcctc agaaaatccg gatgaagccg ggcgttacag tatggacgtt gagtatggtc
    13921 agtacagcgt tattctgttg gtggagggat tcccgccgtc acatgccggg actatcaccg
    13981 tgtatgaaga ttctcaaccc ggtacgctga atgattttct cggtgccatg actgaggatg
    14041 atgcccgtcc ggaggcactg cgtcgctttg aactgatggt ggaagaggtg gtgcgtaacg
    14101 cagaggaggc gaagaagaat gccggagagg cggagacgtc agcgaggaat gccggcatat
    14161 cagccagtca ggcagaagag agcgctgcaa atgctgacac ttcagcaggg gatgcatcgg
    14221 agtcagcccg gcaggcggca gaaagtgcag cctcagcaaa gcagtcagag gaggcgtcct
    14281 cgtcctcggc ctctgcggcc gctcaaaaag ccagtgagtc attacaaagt gcaacagatg
    14341 ctgagttgtc aaaaaagacg gcagaaagtg cagccggtaa tgcagtcagg gatgcaacga
    14401 ccgcaacaga aaaagcccgg gagtcagcag aaagcgcaca gtcagcggaa caaagcagga
    14461 tagcggcgga agaggccgta aaccgaatcc ccaccgtggt gggacctccc gggccaaagg
    14521 gggaaccggg gcccgcgggt cctcaggggc cgaagggaga taaaggagag cgtggcgaca
    14581 ccggcccggc aggggccaaa aggtgacaaa ggcgatccgg gagtggctgg accagcaggt
    14641 ccggcaggtg cgccggggcc gaaaggcgat aaaggtgatc cgggagtagc aggtccagca
    14701 ggtccggcgg ggccacaggg accgaaggga gacacaggag cccccgggca aggaacagaa
    14761 ctgcttacta ctgccaatac atggactcag gcacaaactt ttaatggtgg tattaatggc
    14821 aatttgacgg tgaccggaaa cggctcattt aacgatattc agatccgttc ggataaacgc
    14881 aacaagcgaa atctggtaaa actggataat gcgttagatc gtctggaggc acttactggt
    14941 tatctttacg agatacagta ctctgccgac ggttggcaaa cgtcggttgg tttaattgct
    15001 caggatgcac aaaaagcatt gcctgaactg gtaactgaag acgcagacgt tatatctggt
    15061 gaaaaacgtc tgcgtcttaa ctacaacggc ataattgcat tgttagtcga gggctttaaa
    15121 acacttcgtc atgagattaa agaactccgg gagaagtaaa cgacagctgt tgtagtttct
    15181 ggtttctact gaatttaaat tgtggggtga cactcacccc acgcattcag aagggggaga
    15241 tgagatgggg gtaacatcgg gatgggtagg ctcttcggct aagagcgaaa caggtgagca
    15301 gtggatggga gccgccggaa ccaaactggg actgagtaaa ccttttatga tgagccaaat
    15361 ggttgggcga actatgggct gtaaaattgc aactgagtac tataaatgga aatcctctga
    15421 caaggttgat aactggggcg cagttggcgc tgactggcct ttagaagaaa aaagtaaagg
    15481 tacaattaca aacgccgcaa gctgcggatc agggaggctg gtaggggctg tcgttacact
    15541 ttctcacttt ttgacgaact ctacaccgac agctgctgtt tatttagccg gtggtaaagc
    15601 aggtaacatc accgtaaacg taggtggtgc tacacaaacc atgatttatc agggcgttgt
    15661 tagtgggttc cagtattact ggtcaggttc tgttagttcc gctttcgtgg aggcaatgaa
    15721 aaagacggga gtaccccagg atctaaaaat tagttaaatg gtaaataaat aattttaaaa
    15781 acttcacgtt ctacataccg gagacgccgg atatatagga tattgtttta agttgccaga
    15841 gaaatttttc cggacggatg ctgataataa tgatgtgcca atgacggcag catcatggat
    15901 ggcactgagt gaagcgacag agcaggcgat gtttgcgaag ggagtggaga ttaatacacg
    15961 gcagttgcag atgaaagccg aggttgaggc gctgacagac ctgaaggcga tccgcagtta
    16021 tgttgtcgga tggcctgctg gctgaataaa aaaacgggac cacgaccagt cccggaacca
    16081 tgagttttag ggtattagtt tgttatcata gttagcgtgc taagtatgcc atgtcaggtt
    16141 gattagtgaa gtgatgttgt tcgcattttt gcacggcgga gaatattcag atttttggaa
    16201 atccatattt ttcccgtgcg cgattacatg cttcatttac gatgctattt tcgccggaca
    16261 ttgcgaattc cctgcatgtg gacggttttt gtaaacagag caatatgcgt tttctccggg
    16321 ggggccggca agagcgccac atcggggatt tttctgattg gtgccgcgca tacagcgatg
    16381 aaaaggagat atttgctcag tgagactgac cgaaaccttt ccgccagcat cgtcagcttc
    16441 tgcccagtaa aaagagacgc ggaaaatgca caacaggcac cacacgtcat gcatggattc
    16501 agattgctca taattcacca gtacagctat aaatcgtaaa gagaacagcg gtacatcgta
    16561 tgtaagaacg taccgcggct ggctggtgaa cttccgatag tgcgagtatt gaatgatttc
    16621 cagccgttac cgattttacg tgctaattag tgaacaaacc actcgtcagc agactcccag
    16681 gtatctttca gagtttcctg aacaaaagtt ttagctgaat ctttatcggc ggtgcgcgta
    16741 acagaaaggc catcgttgct ggtagctttt acgatcacct ctacatcgtc ataacgttta
    16801 ctgatgcgtc gggttaattc ttcctttaac gcatccacag caccggttgg cattttagtc
    16861 attttttctt tggctatgca gatttcaata cgcataaaag tccctctaca ctgtgtttgt
    16921 atacagtatc atttttaact gtatggataa acagtattaa gggtgaagga aagtgatttt
    16981 ttggggcatg catggggcaa aaatatttgt tgtggggcat tttggggcat gattgggaca
    17041 ctttgttaca tatgaacttt gccgattttt atatgacatg gaaatacaac gctttgattc
    17101 ttctaaataa aaaacatgct cttgggcgtt ctttagtgat ttttaaaaat tccgtatcac
    17161 gcagttaaag tggcgggcat actcttcaag gctggtgatc cccaaccgca cccatttagg
    17221 atgcgaccat tgcggtagac cgatgtaaat cataacgcgt gaaggatctc ttccacgcta
    17281 cgcacacggg cgatgcgcgg gtagatatga ttaatgctgt tattgtgttg ctcggcgctg
    17341 gcggcactac aggcgtcttc ggcaatcacc agattaaagc caagttccca ggcattgcgg
    17401 gcggtggatt caacaccgat attggtcgag atcccacata acactattgt atcgatacct
    17461 cggcggcgca gttgcaactc cagatccgta ccgtaaaacg caccccactg acgtttgatg
    17521 atttcgatat cactgtcagt tgcacctaat gcagctggat gttgccacca gttttcgggc
    17581 aacactttag cgggggag
//
LOCUS       DAJVUK010000084        17503 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.084, whole genome shotgun sequence.
ACCESSION   DAJVUK010000084 DAJVUK010000000
VERSION     DAJVUK010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17503
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.084"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..321)
                     /locus_tag="OQQ57_002549"
     CDS             complement(<1..321)
                     /locus_tag="OQQ57_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor (BI)-1/YccA family protein"
                     /protein_id="HCS1957266.1"
                     /translation="MESYSQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYL
                     EITATKYDSPTMYVAIGLLLVCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLVP
                     VYAII"
     gene            complement(527..1231)
                     /locus_tag="OQQ57_002550"
     CDS             complement(527..1231)
                     /locus_tag="OQQ57_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HCS1957267.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            complement(1368..1820)
                     /gene="moaE"
                     /locus_tag="OQQ57_002551"
     CDS             complement(1368..1820)
                     /gene="moaE"
                     /locus_tag="OQQ57_002551"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HCS1957268.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFAGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            complement(1822..2067)
                     /gene="moaD"
                     /locus_tag="OQQ57_002552"
     CDS             complement(1822..2067)
                     /gene="moaD"
                     /locus_tag="OQQ57_002552"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HCS1957269.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            complement(2060..2545)
                     /gene="moaC"
                     /locus_tag="OQQ57_002553"
     CDS             complement(2060..2545)
                     /gene="moaC"
                     /locus_tag="OQQ57_002553"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HCS1957270.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            complement(2548..3060)
                     /gene="moaB"
                     /locus_tag="OQQ57_002554"
     CDS             complement(2548..3060)
                     /gene="moaB"
                     /locus_tag="OQQ57_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HCS1957271.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(3082..4071)
                     /gene="moaA"
                     /locus_tag="OQQ57_002555"
     CDS             complement(3082..4071)
                     /gene="moaA"
                     /locus_tag="OQQ57_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HCS1957272.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
                     GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
     regulatory      complement(4059..4203)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            4468..5376
                     /gene="yvcK"
                     /locus_tag="OQQ57_002556"
     CDS             4468..5376
                     /gene="yvcK"
                     /locus_tag="OQQ57_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HCS1957273.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(5568..7589)
                     /gene="uvrB"
                     /locus_tag="OQQ57_002557"
     CDS             complement(5568..7589)
                     /gene="uvrB"
                     /locus_tag="OQQ57_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HCS1957274.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVETQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(8168..8845)
                     /gene="bioD"
                     /locus_tag="OQQ57_002558"
     CDS             complement(8168..8845)
                     /gene="bioD"
                     /locus_tag="OQQ57_002558"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HCS1957275.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
     gene            complement(8838..9593)
                     /gene="bioC"
                     /locus_tag="OQQ57_002559"
     CDS             complement(8838..9593)
                     /gene="bioC"
                     /locus_tag="OQQ57_002559"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HCS1957276.1"
                     /translation="MATVNKQAIAAAFGRAAAHYEQHAELQRRSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            complement(9580..10734)
                     /gene="bioF"
                     /locus_tag="OQQ57_002560"
     CDS             complement(9580..10734)
                     /gene="bioF"
                     /locus_tag="OQQ57_002560"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HCS1957277.1"
                     /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRA
                     LLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLAR
                     LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYNTSMPPAQAQAL
                     RASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
                     AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
     gene            complement(10731..11771)
                     /gene="bioB"
                     /locus_tag="OQQ57_002561"
     CDS             complement(10731..11771)
                     /gene="bioB"
                     /locus_tag="OQQ57_002561"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HCS1957278.1"
                     /translation="MAHRPRWTLSQVAELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPNERDMPYLEQMVQGVKDLGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            11858..13147
                     /gene="bioA"
                     /locus_tag="OQQ57_002562"
     CDS             11858..13147
                     /gene="bioA"
                     /locus_tag="OQQ57_002562"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HCS1957279.1"
                     /translation="MTKDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR
                     LIDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVAMKMALQYWQAKGEVRQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHNLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            13206..13682
                     /locus_tag="OQQ57_002563"
     CDS             13206..13682
                     /locus_tag="OQQ57_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HCS1957280.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKGETHRYIFTVHALDVEHIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            13834..15117
                     /locus_tag="OQQ57_002564"
     CDS             13834..15117
                     /locus_tag="OQQ57_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HCS1957281.1"
                     /translation="MNTFSVSRLALALAFSVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(15258..17495)
                     /locus_tag="OQQ57_002565"
     CDS             complement(15258..17495)
                     /locus_tag="OQQ57_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HCS1957282.1"
                     /translation="MFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMD
                     KLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVF
                     GLSAAQRYGGIFVPPHIAIIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGE
                     LVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVG
                     PGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYY
                     DGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLL
                     DKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
                     AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQM
                     SAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQ
                     PLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEF
                     TLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMV
                     YAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEV
                     GDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFN
                     KNRQM"
BASE COUNT         4093 a         4734 c         4440 g         4236 t
ORIGIN      
        1 gataatggca tatacaggaa ctaaacttgc aacgacaatc gccaccaaag agagtaaaaa
       61 cagatatatt acgcctgcga tgacggcatt tatcttgttg atatccttac ttaagccata
      121 catacaaact aataataacc ctatggcgac atacattgtt ggtgaatcat atttggttgc
      181 cgtaatttcg agatacttag ctccccaggc cagtcctgcg gttgccacca aacctaaagc
      241 ggtaatgagc catataccgt ttaatatcct ggtctcgtgc tgaaaatcta atttattgct
      301 gttttgtgag tatgattcca ttcttttagt tgtccttaga aaaaatatta atattcacca
      361 tcaataaatt taaacccacg catacaaaat acttttgtat ttatggatac ggaaaacgct
      421 tccgctcggc cataaggcgt attttatacc tggtacttgt taagtgtcgt ttttagtaag
      481 aaaagaaatc ccgacacatg gccgggatat tgatggtgaa aaagaattaa cggcggttgc
      541 caaaaattcg cagcaacatc aggaacaggt tgatgaagtc cagatacaag gttaacgcgc
      601 caagaatgga atatttgcgc aggttcgacg tgtcgcgggt atcaatctgc tcacccatat
      661 ttttcaattt ctgagtgtca tacgccgtca atccgacaaa gacaatcacg ccgatgtagg
      721 taactgccca catcaatgct tcgcttttca gccagaagtt gaccagcgat gccagcacaa
      781 tgccgattaa cgccataaac agcatattgc caaagccact taaatcgcgc ttcgtggtgt
      841 aaccgtacag gctcattgcg ccgaacatcc cggcagtaac gacgaaagta ctggcgatag
      901 aagcagcggt atagacaatg aatatactgg aaagcgtaag acccgtcagc gccgaataaa
      961 gcataaagag catcgtcgtt acacctgcgc tcagcttttg aatcatcgct gataacacaa
     1021 taaccaatgc taattgcgcg atgatcagac cgattaaaaa gacacggtta gtgaacaaca
     1081 gctccatcac ggccgcggaa ttagccgcat accaggcaac aaatgcggtc agcaacaagc
     1141 caacggtcat ccagccatag acttgcgcca tataagtttg caagccagcc cggggttgta
     1201 cgattgaatc agaacgtggg aatctgtcca tgacgatctc ctgaagatat aaggaatatc
     1261 ttaaggatac tgcaaaatga tgaggctgtg catcgacgca gcgtaaacgc atgtactgag
     1321 cggtgaaatt gccggacgca gcggtgcctt atccggctaa caaaaaacta ccagcgtttt
     1381 gccgcctgct gatcgctctc ccgagcttca acccagcggt cgccttccgg cgtggcttcg
     1441 cgcttccaga acggtgcgcg ggttttgaga taatccataa taaactgccc ggcttcaaac
     1501 gcactgctgc gatgcgcact ggtgacaccg gcaaaaacga tttcatcgcc cggccataat
     1561 tccccgatgc ggtgaatcac agtgacgcgc cccagcggcc agcggttacg cgcttcatca
     1621 acaatttctg ccagtgcttt ttcagtcatt cccggatagt gttcgagggt taatgctttg
     1681 acgctgtcgc ccaggttatg gttgcgcacc ttaccagtaa aggtgactac cgcaccgtct
     1741 tcgtcacgct ccgccagcca cgggtactct tctcctacgc tgaacggctg cggaccaaca
     1801 acaattttgg tttctgccat cttaacctcc ggttaccggc gggaagaaag ctacttcgtc
     1861 gccgtcagtc agcggatggt caaaactcac cagcgtctgg ttgacggcag ccagtaattt
     1921 gccatcttcc agcgccagcg cccagcgatc gctctgcgca gccatgtgct ggcgtaacgc
     1981 ttcaacagtt gggaaatccg cagccacttc ggttgcatct gttcccacca actcgcgcac
     2041 ctgcgcgaaa aaaagaactt taatcatccg cttccacctt aaagtcaccc gacttgccgc
     2101 cgctcttcgc cagcaaacgt accggaccaa tcaccatatc tttttgcacc gctttgcaca
     2161 tgtcataaat ggtcagcgcc gccacggagg ccgcggttaa tgcttccatt tcgacaccgg
     2221 ttttcccggt caggcggcat aaggtttcta tacgcacccg attgtgctcc ggctcggcct
     2281 gtaaattgac ttcaactttg ctgagcatca gcggatgaca gagcgggatc agatcccagg
     2341 tgcgttttgc cgcctgaata ccggcaatac gcgcagtggc aaatacgtcg cctttgtggt
     2401 ggcgaccatc aataatcatc gccagcgtct cgctgcgcat ggtgacaaag gcttccgccc
     2461 gcgcttcacg cacggtttcc gctttggcgg agacatccac catgtgcgct tcgccagcgg
     2521 cgttgatatg ggtcagttgc gacatactta tttcttcaaa tgtggatgga aattacacgg
     2581 acgcgtacgg gcatccagct gcggcgcgat gatattttcc catgcggtac ggcacgcttt
     2641 ggtcgaaccc ggcatggcga aaatcagcgt tttgttggcg acgcccgcaa ccgcacgaga
     2701 ttgcaacgtg gaagtgccaa tctcttcaaa cgacaacatc cggaacactt caccaaaacc
     2761 ttcaacttca cggtcgaaca acggcagcaa tgcttcggga gcctgatcac cttccgtcag
     2821 gccagtacca cccgtaatca ataccacttg tacatcgtcg ctggcgatcc acgcagatac
     2881 ctgagcgcga atagcgtagc ggttttcttt cacaatggct ttatcgacaa cgtgatggcc
     2941 cgcttcttgc gccgaatcgc gcagatagtg accggaggta tcgtcttctt caccgcgacg
     3001 attagaaacc gtaagaatag caatacgggt cgggataaat tcagtgctta cctgactcat
     3061 ctgatctctc cttttgacgt tttagccgcc aatgtacgat aagttttgcg taataccggt
     3121 gttgttttga tgcaggaaat gggtctgttt cttctcccgc agcgccgctg aaatacgcgc
     3181 ttccagcgcc tgttgctggg tatcgtcttc cagcagatcg cgcaggttaa cgccgccttc
     3241 accaaacagg cagagatgga gtttaccaat ggaggaaacg cgcaggcggt tgcaagtggc
     3301 gcagaagtct ttttcatacg gcatgataag gccaatctct ccggcgtaat ctggatggca
     3361 aaagacttgc gcgggaccgt cgctgcgttg acgtaattgg tggatccagc cgcgacgcag
     3421 tagctcgtca cgcagaacct gaccagagat gtgatgctta cggaagagct cgctgccctc
     3481 gcccgtttcc atcagttcga tgaaacgcag ctggataggg cgatgctgga tccagttcag
     3541 aaaggtgtcg agctggtgat gattaacatc acgcatcagc acggtattga ctttgacctt
     3601 ctcaaaaccg gcctcaaatg cagcatcaat ccctgccatg acctggttga atttatcctg
     3661 cccggtaata gcgtgaaact ggcgggcgtc cagactgtcg acactgacgt taatgccagt
     3721 aagtcccgca tcgcgccagt tcgccacatc gcgttccaga cggtaaccat tggtggtgac
     3781 cgcaatctgg cggatagcgt cgttttcccg cacagcggcg atgatatcgg taaagtcgcg
     3841 gcgtaaagac ggctcacctc ctgtcaggcg cactttttcg gtgcccagac tggcgaaggc
     3901 gcgcgtaacc cggcgaattt catcgacggt aagaaagcct ttattggtga cgccgctcgg
     3961 tttgtagcca tccggcaggc agtaggtgca acgaaagtta cacacatcgg taatcgacag
     4021 gcgcaagtag taaaacttac gcgcaaatgc atcagtcagt tgtgaagcca tgtacacctt
     4081 tccagatacg ggaggcgaag tcatttcttc cttcgccctg gtggcaatct ttacgagcat
     4141 tgtcacggcc aaagcaccgt atcagttgac ccaggtgcag aggctagagt gtttagtggt
     4201 taagccgata ctagcgtgta aatgagattt ttaccatcca cactttcgct atgcaatcat
     4261 gtatatagcg tcatgatcgt gctatttcgc tacagaataa gggaaaatgg cagttttact
     4321 ttgatataca tcatcaggga ggcatagcgt gcatcgtcct ttagaggtag aagaaaatag
     4381 tttgtatcct caatattggc aggttaattg ctgtttcccc gcaatttgcg ctactgtagc
     4441 gcggataatc tgactccagg aaactatatg cgcaatcgta cgctggctga tcttgatcgt
     4501 gtcgttgctc tcggcggagg gcatggactg ggacgcgttc tctcatcact ttcgtctttg
     4561 ggttctcgtt taacgggtat cgtcaccacc acggataatg gtggctcgac ggggcgtatt
     4621 cgccgttcag aaggcggcat tgcctggggc gatatgcgca actgcctcaa ccaactgata
     4681 acggaaccga gcgtcgcctc cgcgatgttt gaataccgtt ttggcggcaa tggcgaactt
     4741 tccgggcaca accttggaaa cttgatgtta aaggcgctgg atcaccttag cgtgcggcct
     4801 ctggaagcca tcaatttaat tcgtaatctg ctgaaagtgg atacgcattt gattccaatg
     4861 tcagagcatc ccgtcgatct gatggcgatt gacgatcagg ggcatgaagt ttacggcgag
     4921 gtcaatatcg accagttaac tacgccgatt caagagttat tattaacgcc gaatgtaccc
     4981 gcaacgcgtg aggcagttca cgctatcaat gaagcggatc tcatcattat tgggcctggc
     5041 agtttttata ccagcctgat gccaattctg ctgctgaagg aaatcgccca ggcattacgc
     5101 cgcacgccag cgccgatggt ttatatcggc aatctggggc gtgagttgag tttacctgcg
     5161 gctaatttga agctggaaag caagctggca attatggagc agtatgttgg taaaaaagtc
     5221 attgatgcgg tcatcgtcgg gccaaaagtg gatgtctcgg cggtgaaaga gcggattgtg
     5281 atccaggagg tactggaggc cagcgatatt ccgtatcgtc atgaccgcca gttgttacat
     5341 aacgcgctgg aaaaggcgtt acaggcttta ggttaacgga aatccgaagg aaaattccgg
     5401 cttcctattg aagacaaagt gcgcgttgtt tatgccggat gcggcgtgaa cgccttatcc
     5461 ggcctacaaa ccgcgcaaat tcaatatatt gcggagaaaa tgtaggcctg ataagcgtag
     5521 cgcatcaggc tgttttccgt ttgtcatcag tcttcttcgc tatcctgtta cgatgcggca
     5581 ataaacaact cacgcaactg atgcaactgg tcacgaattt gtgccgcttc ttcgaactcc
     5641 agattctgcg cgtgttgcat catcagccct tccagttcat ggattttctg ctgcaacgct
     5701 ttcggcgaca tatccatcgg cacattatcc ggctcaacaa tcgggcgcga ttttcctctg
     5761 cccttcgctt tggttttggc aatgttctgc cccagcgcca ggatatcgac cactttcttg
     5821 ttcaagcctt gcggcgtaat gccgtgttcc tcgttgtact tctgctgttt ctcacggcga
     5881 cgttcggttt cgccaatcgc tttcgccatt gatggggtga tcttatcgcc gtagagaatc
     5941 gctttaccgt taacgttacg tgccgcacga ccaatggtct ggatcaacga acgttcggaa
     6001 cgcaggaagc cttctttgtc agcgtcgagg atcgccacca gcgacacttc cggcatatcc
     6061 agaccttcgc gcagtaagtt gatccctacc agcacgtcga actcacccag acgcaagtcg
     6121 cggataatct ccatacgttc gacggtgtcg atatctgagt gaagataacg cacgcgctcg
     6181 ccatgttctt cgagatattc ggtaagatct tccgccatcc gcttggtcag tgtggtgacc
     6241 agtacgcgtt cgttaattgc cgctcgctga cgaatctccg aaagaagatc atcaacctgt
     6301 gtctccaccg gccgcacttc gataatcggg tcaagcaatc cggttggacg caccacctga
     6361 tccaccacat cgccgccgga tttttccagc tcgtaattac ccggcgtcgc cgaaacatag
     6421 atggtttgcg gcgctaatgc ttcgaactct tcaaacttaa gcggacggtt atccagcgct
     6481 gatggcaggc ggaagccgta ctccaccagt gtctctttac gcgcccggtc accgcgatac
     6541 atgccgccaa tttgtggaat ggtgacgtga gattcatcga cgaccagcag cccatcggca
     6601 ggcaggtaat caaacagcgt cggcggtggc tcacccggtc cacgaccgga gaggaagcgc
     6661 gagtagtttt caatccccga acagtagccc agctcgttca tcatctccag atcaaactgg
     6721 gtacgctggg tcagccgctg ctcttccagc agtttgttgt tttccaacag cactttgcgt
     6781 ctggcggcca gttcttcttt gatctcctcc atcgcctgta cgatgcgctc gcgcggtgtg
     6841 acgtagtgcg ttttcgggta gatggtaaaa cgtggaatag tggaaacaat ctgcccggtc
     6901 agcgggtcaa ataacgacaa tcgttccact tcctcgtcaa acagttccac gcgaagtgca
     6961 atgtcatccg attctgccgg gaagatatca atcacctcgc cacgaacgcg gaaagtacca
     7021 cgctggaatg cttgatcatt acgagcgtat tgcagctccg ccagtcggcg cagaatcgcg
     7081 cgctgatcga taatcatacc gaccgtgaga tggagcatca tcttgagata taaatcagga
     7141 tcgcccagac cataaatcgc ggaaacagag gccactacaa ccacatcacg ccgctccagc
     7201 atcgctttgg tggcggataa acgcatctgc tcaatatgtt cgttaaccga ggcatctttc
     7261 tcaatgaaag tgtcggaact cggtacatag gcttccggct gatagtagtc gtagtaggag
     7321 acgaaatact ccaccgcgtt ttccgggaag aactctttca tttcgccata cagctgggcc
     7381 gccagcgttt tgttgggcgc aagtaccatg gttgggcgct gaaggtcagc aatgacattg
     7441 gcaatggtga aggttttccc tgagccagtc acgccaagta acgtctggtg cgccaggcca
     7501 tcttccagcc cctcttcgag acgtcgaatc gcctctggct gatcgccaga aggtttaaaa
     7561 gcggaattca gtttgaacgg tttactcatg agtcgctacc tgaaggagtt gggcgggcag
     7621 gtatgtaatt ttactcgtcg tacttaatta tgccaacaaa ttatactgga taaaaaaaca
     7681 gttcatcacc ataatatttc tgatacagcg taaactccgc tgtcaatcat gagcaaaatt
     7741 tactctgtgg cgagataaaa ctccggcctt accgggttat ccccaaagca acggcttttt
     7801 taacatttgt caagatgagt gatgacagtt ttatggcaag agatgcctgt tcagtgactg
     7861 ccattgcatt tatctaacca gttaaaaaat aaaagatatt tctttgagcc gtctttaacg
     7921 ccaattcgcg tgcaagccgc gtattctctc gcttgcctcg tgttttctaa ctctaataca
     7981 catggttatc cacaggaata gtggataact gtctccagcc cctatccccc gccgcctggg
     8041 caattcccac attcgccgca tgaggcggaa gtaaaatttt tttcgtgatt attttagaat
     8101 ttaattggtt aaattgcagt caatcgaaga cgcgatctcg ctcgcaattt aaccaaatac
     8161 agaatggcta caacaaggca aggtttatgt actttccggt tgccgcattt tctggatttt
     8221 ctgcaagcca ggggatctct cccagcagcg gcgcgggaat catgcgggtg agcgtggtca
     8281 tatattcagc gtgacgtttt cccggaggcg taacatcgtt cgccacccaa cccgccagag
     8341 tcagtccggc gtgttgtatt gcctgcgcag tcaacatcgc gtgattaata cagccgagtt
     8401 tcacaccaac taccagtatc accggcagtt gttcctgtgt tacccaatct gcaaaagtga
     8461 aagtgtcaga aagcggcgta aaccagccgc cagcaccttc cactaacacc cagtcagcct
     8521 gttgttcaag cgcgcgtaat ccggcgctca ttaccaatga ttctatcggc ctgccctctt
     8581 gcgcgctgat gatgtgcggc gaagtgggtt ctgcgaaggt gtaaggattt actgttgcgt
     8641 aatccagctg caggctgctg ttgtgctgta acgccagcgc gtcactatta cgtaagcctt
     8701 ccggggtctt ttcgctgcca gaggcgaccg gtttataacc tgccgtccga taacctactg
     8761 ccttcgcggc ttgtaaaagt gcacaactgg cgacggtttt ccccacttcg gtatccgttc
     8821 cggtgacaaa ataacgttta ctcacgagca atcactccca aaaaaagatg atacgtcaga
     8881 ggatatcgcc cctgttgttg cggccaggcc agttgcaatc gctgcaattg cgaacgcgtt
     8941 aatattcgcg ggtcgcgccc ttcatgaaga tgcgtagcac cgatgccttt cagcgaacgc
     9001 atggcactga gcgcatcatc aaaccatagt gtgatgggct gaatatgatg ttgataatgc
     9061 acgccgttca gcgactgttc gatttcatct ggcggtaaaa agcgattagc atgcggacgc
     9121 tcgtccaccg cctgccacgc ctgatgcagt tcgggtaacg atccctgcac cagcgtggta
     9181 aacgccacca cgcctccggg gcgcaccacc cgatacagct cgcggagtgc cgtggataaa
     9241 ttaccgcacc actgcaccgc gagattgctc catgcaagat cgaacgtcgc agtcgctaac
     9301 ggcagggatt cgatatctcc cgccagataa tggtctgcag catctttctg gcgggcttgc
     9361 acaagcattg gcggtgagag atctaacgcc gtcacctgtg cgtgacgctc tcgccagtgg
     9421 cggctcatcc agcctggccc acaccccgcg tccagtacgt gggtgtattt acgctgtggg
     9481 agcattgcca gtaagacgtc agcactccgg cgctgtaact ctgcgtgttg ctcatagtgc
     9541 gcggctgccc gaccaaatgc cgctgcaatg gcttgtttat taaccgttgc catgcagcac
     9601 ctccagcaga cggtcgatat cctgcatttc atgcgctgcg gttagcgtta agcgcagtcg
     9661 cgcagtacca gcgggtacgg ttggcgggcg aatcgccgtg acccagcagc cttgctggcg
     9721 cagtttttct gccagttgta acgcacggct gttatcaccg acgatcaatg gctggatggc
     9781 gctgcatgaa tcagcaagcg taaacggcaa atcctgtact ccggcacgaa aacgcgcaat
     9841 gagtgacacc agtttttcgc gccgtgcatc cccctcatca cggcgaatga ccgccagcga
     9901 cgcacgtaat gcctgcgcct gagcgggcgg catactggtg ttgtagataa ggtggcgggc
     9961 gaattgcagc agataatccg ccaccgtact ggagcaaagc accgctgccc cgctgacgcc
    10021 aaatcctttg ccaaaagtca ccaccagcaa ttctggtttt accttttgca gccagcagct
    10081 gccgcgcccc tgctccccga taacgcccgt gccgtgggca tcatcgacca tcaaccagcc
    10141 attgtgctgt tgcgttacct gctggatttc cgccagtggc gcactatcgc cgtccatgct
    10201 gaacacgcct tctgtcacca ccagttgctg ccccggacag ggggaagcaa gcagtcgcgc
    10261 cagatgagtg acatcgttat gaacaaaacg gcgaagctgc gacgggctta aactggcagc
    10321 ctccagcaat gaggcatggc taagccggtc agcgacaatg cggtcctctt ttgccatcat
    10381 cgcggcaatg accgcctgat tagcggcaaa accagagata aatagcagtg cccgcgaata
    10441 gcccagccac tcggccagtt cttcttccag cgcctgatgc gcaacgctat aaccgctgac
    10501 gtgaccggaa ccgccgctac cgacgccaaa ttgctccgca ccctgctgcc aggcacggat
    10561 aatttgcgga tgatggctta aacctaaata atcgttactg gaaaagttca gatactggcg
    10621 atcatccgcc accagccagc gtccggctcc ttgcgccact ggataacggc gacgcagggc
    10681 atcggcagca cgccgcgcat cgagcgccgc gttgattttc tcctgccagc tcatagtgct
    10741 gccgcgttgt aatattcgtc agtatccggg gtcatcagcg cctgttcaag acgttgctgt
    10801 tgttcgttat cccctgccag cacggcagtt tgctgcggat ttagccccag tttgcggaac
    10861 agttgcaggt ctttatcttc ttccggattc ggcgtggtca gcagtttgca accgtagaaa
    10921 atcgagtttg cgcctgccat aaagcacatc gcctgagtct gttcgttcat ctgctcgcgt
    10981 ccggcagaaa ggcgcacgta agaggtcggc atcatgatcc gcgcgaccgc aatggtgcga
    11041 ataaaatcaa aggcatcaac gtcatcgtta tcggcaagcg gcgtgccttt caccttcacc
    11101 agcatgttga ttggcacgct ttccggcggc gtcggcaggt ttgccagttg cagcaataat
    11161 ccggcgcgat cttttaccgt ttcgcctaag cccacaatgc cgccagaaca gactttgatc
    11221 ccggcatcgc gcactttttc cagcgtatcg aggcgttcct gataagtgcg ggtggtgatg
    11281 atattgccgt aaaactccgg cgaggtgtcg aggttgtggt tgtagtaatc cagcccggcg
    11341 ttcgcgaggc gctgcgcctg agattcactc aacgtgccca gcgtcataca cgcctccagc
    11401 cctaaatctt ttaccccctg caccatctgc tccaggtacg gcatatcgcg ttcattggga
    11461 ttcttccacg ccgcgcccat gcaaaaacgc gtcgatcccg ccgctttcgc tttgcgcgcc
    11521 gactccagca cctgttcaac ttccatcaac cgctcggctt ccagaccggt tttatagcgc
    11581 gagctttgcg ggcaatattt gcaatcttcc gggcaagcac cggttttaat cgacagcaac
    11641 gtgctgacct gcacctgacg aggatcgaaa tgctggcgat gcacctgctg cgcttcaaac
    11701 agcagatcca gcaacggttt ttcaaataat tctgcgactt gcgacaatgt ccagcgtggg
    11761 cggtgagcca tggggcttct ccaaaacgtg ttttttgttg ttaattcggt gtagacttgt
    11821 aaacctaaat cttttcaatt tggtttacaa gtcgattatg acaaaggacg atcttgcctt
    11881 tgaccaacgc catatctggc acccatacac atccatgacc tccccgctgc cggtttatcc
    11941 ggtggtgagc gccgaaggtt gcgagctgat tttgtctgac ggcagacgcc tgattgacgg
    12001 tatgtcgtcc tggtgggcgg cgatccacgg ctacaatcac ccgcagctta atgcggcgat
    12061 gaagtcgcaa attgatgcca tgtcgcatgt gatgtttggc ggtatcaccc atgcgccagc
    12121 cattgagctg tgccgcaaac tggtggcgat gacgccgcaa ccactggaat gcgtttttct
    12181 cgcggactcc ggttccgtag cggtggaagt ggcgatgaaa atggcgttgc agtactggca
    12241 agccaaaggc gaagtgcgcc agcgttttct gaccttccgc aatggttatc atggcgatac
    12301 ctttggcgcg atgtcggtgt gcgatccgga caactcaatg cacaacctgt ggaaaggcta
    12361 tctgccagaa aacctgtttg ctcccgcccc gcaaagccgc atggatggtg aatgggatga
    12421 acgcgatatg gttggctttg cccgcctgat ggcggcgcat cgtcatgaaa tcgcggcggt
    12481 gatcattgaa ccgattgtcc agggcgcagg cgggatgcgc atgtaccatc cggaatggtt
    12541 aaaacgaatc cgcaaaatgt gcgatcgcga aggtatcttg ctgattgccg acgagatcgc
    12601 caccggattt ggtcgtaccg gcaaactgtt tgcctgtgaa tatgcagaaa tcgcgccgga
    12661 cattttgtgc ctcggtaaag ccttaaccgg cggcacaatg accctttccg ccacactcac
    12721 cacgcgcgag gttgcagaaa ccatcagtaa cggcgaagcc ggctgcttta tgcacgggcc
    12781 aacttttatg ggcaatccgc tggcctgcgc ggctgcaaac gccagcctgg cgattctcga
    12841 atctggcgac tggcagcaac aggtggcggc tattgaagta cagctgcgcg agcaacttgc
    12901 ccccgcccgt gatgccgaaa tggttgccga tgtgcgcgtg ctgggggcaa tcggcgtagt
    12961 cgaaacaact cgtccggtga atatggcggc gctgcaaaaa ttctttgtcg aacagggggt
    13021 atggatccgg ccttttggca aactgattta cctgatgccg ccctatatta ttctcccgca
    13081 acagttgcag cgtctgaccg cagcggttaa ccgtgcggtg caggatgaaa catttttttg
    13141 ccaataacgg gaagtcagcg tgtgggtttc tggctacact ttctgcaaac tagaaaggag
    13201 ggttcatgaa actcatcagt aatgatctgc gcgatggcga taagctgccg catcgtcatg
    13261 tctttaacgg catgggttac gatggcgata atatttcacc gcatctggcg tgggatgatg
    13321 ttcctgcggg aacgaaaagt tttgttgtca cctgctacga cccggatgcg ccaaccggct
    13381 ccggctggtg gcactgggta gttgttaatt tacccgctga tacccgcgta ttaccgcaag
    13441 ggtttggctc tggtctggta gcaatgccag acggcgtttt gcagacgcgt accgattttg
    13501 gtaaaaccgg atacgatggc gcagcgccgc cgaaaggcga aacccatcgc tacattttta
    13561 ccgttcacgc gctggatgta gagcatattg atgtcgatga aggagccagc ggcgcgatgg
    13621 tcgggtttaa cgttcatttc cactctctgg caagcgcatc gattaccgcg atgtttagtt
    13681 aatcactctg ccagatggcg caatgctatc tggtatcact taaaggtatt aaaaacaact
    13741 ttttgtcttt ttaccttccc gtttcgctca agttagtata aaaaagcagg cttcaacgga
    13801 ttcatttttc tatttcatag cccggagcaa cctgtgaaca cattttcagt ttcccgtctg
    13861 gcgctggcat tggcttttag cgtgacgctg accgcctgta gctcaacacc acccgatcaa
    13921 cgtccttctg atcaaactgc gcctggtacc tcttctcgcc cgattctgtc ggcaaaagaa
    13981 gcgcagaatt tcgatgctca acactatttt gcatccctga caccaggtgc tgcagcgtgg
    14041 aatccttccc cgattaccct gcctgcgcaa cctgactttg ttgtcggccc ggcgggcact
    14101 caaggtgtaa cgcataccac gattcaggcg gcggtagatg cggcaattat caagcgtacc
    14161 aacaagcgcc agtatattgc cgtgatgcct ggtgagtatc agggaacggt gtatgtccct
    14221 gctgctccgg gtggaattac tctgtacggt acaggtgaaa aaccgattga tgtgaagatt
    14281 gggctttccc ttgatggggg catgagccct gccgactggc gtcacgacgt caacccgcgc
    14341 ggcaaatata tgccaggtaa accagcgtgg tatatgtacg atagctgcca gagcaaacgc
    14401 agcgacagta tcggtgttct ctgctctgcg gtcttctggt cacaaaacaa tggcctgcaa
    14461 ctgcaaaacc tgaccatcga aaacacgctg ggcgatagcg tagatgcagg taaccatccg
    14521 gcggtggcac tgcgtactga tggtgaccag gtacagatta acaacgttaa cattctcggt
    14581 cgtcagaaca ccttctttgt caccaacagc ggtgtgcaga accgtctgga aacgaatcgt
    14641 cagccgcgta cgctggtgac caacagctac attgaagggg atgtggatat cgtttctggt
    14701 cgcggcgcag tggtgttcga taacaccgaa ttccgcgtgg tgaactcacg tactcagcaa
    14761 gaagcgtatg tgtttgcacc ggctacgctg tccaacattt actacggttt cctcgccgta
    14821 aacagccgtt tcaatgcttt cggtgatggt gtggcgcaac tgggccgctc gctggatgtt
    14881 gatgccaata ccaacggtca ggtggtgatc cgtgatagcg ccatcaacga aggttttaac
    14941 acggctaaac cgtgggccga tgcggtgatc tctaatcgtc cgtttgcggg taataccggc
    15001 agcgtagatg ataacgacga aatacagcgc aatctgaatg acactaacta caaccgcatg
    15061 tgggaataca ataaccgcgg cgtgggtagt aaagtggttg cagaggcgaa gaagtaagag
    15121 caattaacta tttgccggat gcggcgtaaa cgccttatcc ggcctacggt tcgatgcgat
    15181 ttgtaggtcg gataagatgc gcaagcatcg catccgacaa taagtgccga atgcgaccta
    15241 cattcacatg gcgcttttta catctgacgg tttttattga agttaatcaa actacccgcc
    15301 ttgataatct cgcgctcttc agcagtcaga ctttccatat agagcgtaat ttccgttacc
    15361 ggcgcatctt catggatcac ataaccttta aacgtcgtac ccggattatc cagcgccgct
    15421 ttaatgccag ggatgtaaat gtaatccccc acttcaaagg ttggcacttc cgccatctgc
    15481 agcggtaaca tcccccagtt gatgacgtta gaacggtagc gtttagtcgc gtactcttcg
    15541 gcaatattcg ccagaccgcc aatcacacgc tggcagctcg ccgcctgttc acgcgcagaa
    15601 ccatcgcctg gtttcaccgc atataccatg ctgccaattt cagtttgcag cggatcaata
    15661 tgctcctgac cagcaatctg cttaatgcgc gcaaacacct ctgtcagctc gctgacattc
    15721 cccgccagac gctgattttc cagctcagca gtcgctttac ttctgccaac ataaccggga
    15781 tcgcggcgtg acagggtaaa ctccgccaga ccaatcggat ttgaacgata agaagaggtt
    15841 tcaccggaag gaatcagttc gtcggtggtg gtcacttcgt cgaggatctt cgagcacact
    15901 ttcaggacga tattgtcagt cagcgcaccc aattccggcc agtctttaat gttcggtccg
    15961 taaatcagcg gttgctgagt tgcccctttc acaaagccct gataaacacg gtttttatac
    16021 ggcgttacat cgaaggcgta ctccggcacg ttgtcccagc aatcaagttc gctggcagag
    16081 gttaaatagc caccgtttgc cgcagtcgca gcgatagaac gagcgtccat caacgccacc
    16141 gctgacatct gcccattagc tggcttagag ccttcgcggt tcgggaagtt acgcgtggtg
    16201 tggcgaatac ttaatccgtt gttgattggc gtatcgcccg cgccaaagca tgggccgcag
    16261 aacgcggttc tgatgattgc gcctgcgcca atcaaatctg ctaccacacc ttttttggct
    16321 aaatccataa acaccggctg tgatgacggg taaaccgcca gcgagaaggt gtcattgcca
    16381 caggattgac cgcgcagtgc attcgccgcc gcgatgacgt tttcgtagtt accgccagaa
    16441 cagcccgcga taatcccctg ctgcactttc aggcgaccat tttccacttt atccagcagc
    16501 gagagtttgg ctttaccgtg cgccacgcgt tcggactcaa tttcaatctc acgcagaatg
    16561 tcggtcaggt tctggttcag tgtgtcgatt tcatacacgt tgctcgggtg gaacggcagc
    16621 gcaatcattg gtttgatggc gcttaaatca acgctgatgc agccatcgta gtacgccatc
    16681 ggttgagggt taagctggca gtaatcctgg ccgcgaccgt gcagcgccag ccagttatgc
    16741 acttcttcat cagtttgcca gacggagctt aaacaggtgg tttccgtggt catcacgtca
    16801 acgctgttac ggaaatcggt agagagcgcg ctaacgcccg gtccaacgaa ctccatgact
    16861 ttgtttttga cgtaaccgtt tttgaacacc gcgccaatga tagccagcgc cacatcctgt
    16921 ggccccacat acggcgcagg ttttccggtc agatgcaccg caaccacgcc cggatagtcg
    16981 atatcccagg tgtcattaag cagctgtttt accaactcac cgccgccctc accgactgcc
    17041 attgtcccta atgcaccgta acgggtgtgg ctgtctgacc cgaggatcat tttgcccccg
    17101 cctgccatca tctcacgcat atattgatgg atgatcgcaa tatgcggagg cacaaaaata
    17161 ccgccataac gctgagctgc cgataaacca aaaacatggt catcaccgtt aatggtgccg
    17221 ccgacggcgc agagtgagtt atggcagttg gtcagcacat acggcagcgg gaaacgttcc
    17281 attccggacg ctttagcggt ctgtacaata ccaacaaagg taatatcgtg agaggctaat
    17341 gaatcaaact taattttaag tttatccata tttccggacg tattatgaga agagagaata
    17401 gaccaggcaa tagtgccttt tttggcttct tcttttttaa tttcgccggt gaaatgttct
    17461 tcggcaatta tttcgttatt actggcgaga aacacgcctt ttt
//
LOCUS       DAJVUK010000085        17495 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.085, whole genome shotgun sequence.
ACCESSION   DAJVUK010000085 DAJVUK010000000
VERSION     DAJVUK010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17495
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.085"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..734
                     /locus_tag="OQQ57_002566"
     CDS             <1..734
                     /locus_tag="OQQ57_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HCS1957283.1"
                     /translation="KPAKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSDWQAF
                     NKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVE
                     SFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQLH
                     TVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSD
                     RMHLTPANHPDLWTQENGEWIYLRN"
     gene            complement(805..1254)
                     /gene="rplI"
                     /locus_tag="OQQ57_002567"
     CDS             complement(805..1254)
                     /gene="rplI"
                     /locus_tag="OQQ57_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HCS1957284.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(1296..1523)
                     /gene="rpsR"
                     /locus_tag="OQQ57_002568"
     CDS             complement(1296..1523)
                     /gene="rpsR"
                     /locus_tag="OQQ57_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HCS1957285.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            complement(1528..1842)
                     /gene="priB"
                     /locus_tag="OQQ57_002569"
     CDS             complement(1528..1842)
                     /gene="priB"
                     /locus_tag="OQQ57_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HCS1957286.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            complement(1849..2244)
                     /gene="rpsF"
                     /locus_tag="OQQ57_002570"
     CDS             complement(1849..2244)
                     /gene="rpsF"
                     /locus_tag="OQQ57_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HCS1957287.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            2571..2846
                     /locus_tag="OQQ57_002571"
     CDS             2571..2846
                     /locus_tag="OQQ57_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1957288.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            complement(2921..3472)
                     /locus_tag="OQQ57_002572"
     CDS             complement(2921..3472)
                     /locus_tag="OQQ57_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HCS1957289.1"
                     /translation="MAINGLFVRTEPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPP
                     RTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIV
                     AEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
                     IEIMRRDLRNRITHEPDPEVAIR"
     gene            complement(3569..4255)
                     /gene="ulaF"
                     /locus_tag="OQQ57_002573"
     CDS             complement(3569..4255)
                     /gene="ulaF"
                     /locus_tag="OQQ57_002573"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase UlaF"
                     /protein_id="HCS1957290.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGKYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     AQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(4255..5109)
                     /gene="ulaE"
                     /locus_tag="OQQ57_002574"
     CDS             complement(4255..5109)
                     /gene="ulaE"
                     /locus_tag="OQQ57_002574"
                     /EC_number="5.1.3.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HCS1957291.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVVKARDWVKARMA
                     KAGMVEAA"
     gene            complement(5119..5769)
                     /gene="ulaD"
                     /locus_tag="OQQ57_002575"
     CDS             complement(5119..5769)
                     /gene="ulaD"
                     /locus_tag="OQQ57_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HCS1957292.1"
                     /translation="MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGV
                     RAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA
                     KEFNGDVQIELTGYWTWEQAQQWRDAGIQQVVYHRSRDAQAAGVAWGEADITAIKRLS
                     DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG"
     gene            complement(5783..6247)
                     /gene="ulaC"
                     /locus_tag="OQQ57_002576"
     CDS             complement(5783..6247)
                     /gene="ulaC"
                     /locus_tag="OQQ57_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HCS1957293.1"
                     /translation="MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYY
                     QAILDAVEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            complement(6257..6562)
                     /gene="ulaB"
                     /locus_tag="OQQ57_002577"
     CDS             complement(6257..6562)
                     /gene="ulaB"
                     /locus_tag="OQQ57_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HCS1957294.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK"
     gene            complement(6578..8026)
                     /gene="ulaA"
                     /locus_tag="OQQ57_002578"
     CDS             complement(6578..8026)
                     /gene="ulaA"
                     /locus_tag="OQQ57_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HCS1957295.1"
                     /translation="MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVT
                     CLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISD
                     TYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL
                     IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASW
                     IAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAM
                     AGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAA
                     IYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFG
                     GWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMA
                     VIIVIALAYMFFAGRALRAEEDAEKQLAEQSA"
     gene            8330..9394
                     /gene="ulaG"
                     /locus_tag="OQQ57_002579"
     CDS             8330..9394
                     /gene="ulaG"
                     /locus_tag="OQQ57_002579"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HCS1957296.1"
                     /translation="MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTPPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQAAPQEIRVQWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            9502..10257
                     /gene="ulaR"
                     /locus_tag="OQQ57_002580"
     CDS             9502..10257
                     /gene="ulaR"
                     /locus_tag="OQQ57_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HCS1957297.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     SRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(10254..11003)
                     /gene="yjfP"
                     /locus_tag="OQQ57_002581"
     CDS             complement(10254..11003)
                     /gene="yjfP"
                     /locus_tag="OQQ57_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCS1957298.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVALAQAGLRVIMPDAPDHGSRFSSDEARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA
                     QQNEFNNIIAPLAEWEATNHLEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRD
                     KLLTCSWQPGVRHRITPEALDAAVTFFRQHL"
     gene            11185..11514
                     /gene="bsmA"
                     /locus_tag="OQQ57_002582"
     CDS             11185..11514
                     /gene="bsmA"
                     /locus_tag="OQQ57_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HCS1957299.1"
                     /translation="MVSRKRNSVIYRFACLLLVLMLSACSALQGTPQPAPPVTNHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            11663..11938
                     /gene="yjfN"
                     /locus_tag="OQQ57_002583"
     CDS             11663..11938
                     /gene="yjfN"
                     /locus_tag="OQQ57_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HCS1957300.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(12055..13680)
                     /locus_tag="OQQ57_002584"
     CDS             complement(12055..13680)
                     /locus_tag="OQQ57_002584"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HCS1957301.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPL
                     LSDRYDSLLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMCHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV"
     gene            complement(13764..14822)
                     /locus_tag="OQQ57_002585"
     CDS             complement(13764..14822)
                     /locus_tag="OQQ57_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HCS1957302.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQ
                     QAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQW
                     VEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYVRKPIYSREGGN
                     VTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIRED
                     NTLITKDTSRFVPHYIAG"
     gene            complement(14825..15463)
                     /locus_tag="OQQ57_002586"
     CDS             complement(14825..15463)
                     /locus_tag="OQQ57_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HCS1957303.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLAL
                     MGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNTKAAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
                     PVWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG"
     gene            complement(15473..15871)
                     /locus_tag="OQQ57_002587"
     CDS             complement(15473..15871)
                     /locus_tag="OQQ57_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HCS1957304.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNN
                     TAVSLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
     gene            complement(15889..16548)
                     /locus_tag="OQQ57_002588"
     CDS             complement(15889..16548)
                     /locus_tag="OQQ57_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfK family protein"
                     /protein_id="HCS1957305.1"
                     /translation="MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDEL
                     LIALPGEEFTVAAVSRIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYE
                     ESYGISKESHWREAINAKTMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
                     AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHII
                     G"
     gene            complement(16599..17297)
                     /locus_tag="OQQ57_002589"
     CDS             complement(16599..17297)
                     /locus_tag="OQQ57_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HCS1957306.1"
                     /translation="MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDK
                     AGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLEN
                     LITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTV
                     GASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSR
                     AQDVLARLQRQQGE"
     gene            complement(17370..>17495)
                     /locus_tag="OQQ57_002590"
     CDS             complement(17370..>17495)
                     /locus_tag="OQQ57_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HCS1957307.1"
                     /translation="NQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEIT"
BASE COUNT         4462 a         4672 c         4186 g         4175 t
ORIGIN      
        1 acaaaccagc aaaattaaaa tttcatcaat acgcacgcgc tacattactg tcaaatcgtg
       61 gaagagatca taattgcgat ggcagacgta ctgttgagat ccacaaacta gatctctctg
      121 actggcaagc attcaataag ttagcaacga agtgtaatgc ttacgatgga gtaacaatga
      181 atggtgataa ttcttttgga tggaaccatg aagctacatt agataatatt cacgcccaga
      241 aatacaataa agcttacgcg ggtgcgaggt taaccgcaga actgaaatat ttattgcaag
      301 atgtcgaatc cttcgaaccc aacagtaaat acacaataca cgaagtggtt ttgggacctg
      361 gttatggtac tccagactat accggccaaa cgataggata cgttgtaacc cttcctgccc
      421 aaatgcctaa ttgctggtca tctgaactac caacaatcga tctttatatc gaccaacttc
      481 acactgttac aggcgtttct aatgccctcg gattcatcat tgctgcattg ctaaacgcgt
      541 attctgattt accccatgat ttgaaaattg gtctgcgttc cttatcaaat tcagcagcaa
      601 tctactcggg tttaggtttc gagcgagtgc cgcaggaccg agacataagg agtgatcgta
      661 tgcatctaac gccagcaaac catcctgact tatggacaca agagaatggt gaatggatct
      721 acttgcgaaa ctaatacctg acgaaaaata gaaagcaaaa cgccgaccaa tggtcggcgt
      781 ttttacgtct cgttgaataa cgaattattc agctactacg tttacgatca ctttcgcgaa
      841 tacttcgctg tgaacctgga agctcacttc gtgttcgcca gtggtacgca gaacgccgtt
      901 cggcagacga acttcgctct tagccacttc aacgccagct gcagttacag cgtcagcgat
      961 gtcgcgagta ccgatggaac cgaacagttt accttcgtcg ccagctttag acgcgatggt
     1021 aacagtttcc agtgcattga ttttctcagc gcgagcatta gcagctgcca gaacttcagc
     1081 cagtttagct tccagttcag cgcgacgtgc ttcgaagaat tcaatgtttt tcttggtagc
     1141 tggaacagct ttaccctgcg gtaccaggaa gttacgagca tagcccgctt taacgtttac
     1201 ctgatcacct aggctaccca ggtttgctac tttatcaagc agaataactt gcattacctt
     1261 atcctctcaa agtcgtatta atggaccgtg accgattact gatggcgatc agtgtacggc
     1321 agcagggaca ggtagcgagc gcgtttgata gcgcgagcca gctgacgctg gtattttgca
     1381 cgggtaccgg tgatacggct tgggacaatc ttaccgcttt cggtgatgta gtttttcagc
     1441 gtagcgatat ctttatagtc gatctcttga acgccttccg cggtgaaacg gcagaacttg
     1501 cgacgacgga aataacgtgc catatggcta gtctccagaa tctatcaatt caatctgctc
     1561 ggcatgcaaa accattttgc tcagtccgtt ctttgccttg tggcatgaaa tgaacccctg
     1621 aacggttatg cgactgccga ccgttatact gtgagtaatg gcttggtttt cgtgtccgct
     1681 aacaataacg ggcatttggc accacgcctg ccggtgaaaa ccggcttcct cctgcacaga
     1741 acgatgctca agcacgaact ggcagtgagg aattcctgat ggactgacct ttcgaagggg
     1801 agtcctgcac acggtgccgg acaacaccag acggttggtc atcagaaatt actcttcaga
     1861 atccccagct tcagcatcat cagcggtttc gtttgcgaaa tcatcgcgac gctcacggcg
     1921 ctcgtctttc gctttaacca tcggagatgc ttcggtaaca gcgtgcttgg tacgcataac
     1981 catgctgcgg ataacggcat cgttgaagcg gaaggtagtt tccagctcat cgatcacttc
     2041 ctgcggagct tcaacgttca tcagaacgta gtgtgctttg tgcagtttgt tgatcgggta
     2101 agccagctga cggcggcccc agtcttccag acggtggatc ttgccttctg caccagtgat
     2161 ggcagcagtg tagcgctcga tcatgcccgg aacctgttcg ctctggtcag gatggaccat
     2221 aaaaacgatt tcgtaatgac gcatcgaatt gctccttacg gattattcag cctcctgtct
     2281 gggtcagccg aatcccgggg aggcaaggaa cgtgttaaag gtcggctgaa aaatgacgcg
     2341 ttatagtact tgtatgcccc actaaactca aggccagccg acaaataaat ctcatctttc
     2401 gctcaaaaga actaactcgc tgatttgaag ttcatcacat tccgtcacag tgttttttcg
     2461 aacaactgca tcagaaatgg tcaccatcaa cttctttatc attgattaaa attaaatcag
     2521 aagatcatca cagaggagag cacacaaagt cagccgtcga ggaggtatct atgttcagtc
     2581 gtgttttagc ccttctggct gtgcttttgc taagtgcaaa tacatgggca gccattgaaa
     2641 ttaataacca ccaggccaga aatatggacg acgtacagag cttaggcgtg atttatatca
     2701 atcataattt cgccactgaa agcgaagcac gtcaggcatt aaatgaagag acagatgcgc
     2761 agggcgcaac gtactaccac gtaattctga tgcgggaacc ggggagtaac ggcaatatgc
     2821 acgccagcgc ggatatttat cgctagcacc aggtataacc aacgaaacat tgccatagtt
     2881 tgctttgccc ccttcgcagg gggctttttt atacggttat tcaccggatt gcgacttccg
     2941 gatctggctc atgagtaatg cgattacgta agtcgcggcg cataatttct attatccaga
     3001 accagaaaat atgccccagg atttcagagg catattcgtc aaaaggcaat tgagtgagcg
     3061 gcggcgttaa attcagcgcc gggcaaaata taccgtggac tgccactgtc acaataagcc
     3121 ctgctaatat cccctgccat aatttcactt tcgggaaaat ttccgcgaca atacaatacc
     3181 ctatcgcaaa aaccagtgag aagatgatat gcgtcaccat caccgggttg ataatatgtt
     3241 ccgagaatgt atacacagtt tgggttgggt cgatacctaa ataatcccgt agaaagatat
     3301 acggcgggtt aaattcatcg cgaccaccgg aaaatgtgcg cggtggcaag gggacttccg
     3361 ctccccattt aacaaatgct gaaataattc ctgaaagtac acccacaagt aacgcaacgc
     3421 catagcggcg acgttgcggc tccgttctga caaacaatcc attgatagcc ataaaaacac
     3481 ctgttgttta tacgattttt taactgaagc ggccccggaa tcagaccaat tacatcccgc
     3541 aggaggtaat aattccgggg cgcactgctt acttctgccc gtaataggcg ttaggaccgt
     3601 gcttacgcat gaagtgttta ttcatgagga agctgtcgat gtgattcagt tgtgggttaa
     3661 tactgcgcgc aatccacgcc attttcgcca cttcttccat caccaccgcg ttatgcaccg
     3721 cgtcgtgggc atctttcccc caggcgaacg gcccgtgctg atacaccaca attcccggcg
     3781 tatgcagcgg ctcggcgtca cccagcgttt cgataatcac tttgccggtg ttcagttcat
     3841 actcgccctg cacctcttct tcgcttaatc cacgcgtaca cgggatgtcg ccaaagaagt
     3901 agtcggcgtg cgtggtgcct aacgccggga tcgccagccc cgcctgcgcc catgcggtgg
     3961 catgagtgga atgggtatgg acaatgccgc cgagcgacgg gtaacgacgg tagagttcaa
     4021 gatgcgtcgc ggtgtcagaa gacgggcgat acttcccttc taccaccttg ccgctcatat
     4081 cgaccaccac catatcgtct gctttcatgg tttcgtaggc aacgccgctg ggcttgatca
     4141 ccaccagccc gcgttcgcgg tcgatagcgc tgacgttgcc ccaggtaaag gtcaccagcc
     4201 catagcgcgg cagatccatg ttggcttcaa acacctgctg ttttagcttt tgcattatgc
     4261 cgcctccacc atgcctgctt tggccatgcg cgctttcacc caatcacgcg ctttcaccac
     4321 ttctgccgcc gggtcttccg ccgtttcgct ccacatctca atcaggtacg gcccgcaata
     4381 gccactctgt ttgagcgttt cgaagcaacg ttcgaaatcc accacacctt cgccaaatgg
     4441 cacgtttttg aagacgcccg gtttggtgtc tttcacatgc accgcgacga tatgcccgat
     4501 tccggcctgc aactccatct gcacatcgtt gtcccacgcc gacaggttgc cgatatctgg
     4561 gtagagctgg aaccacgggt tgttgagata gtgcgcgtaa cccagcgcct tgctgatgga
     4621 gttcatcaac ggataatcca tgatctccat cgccagcgtc acctgcgcgc ggctcgccat
     4681 ctcaacgctc tctttcaggc cgtcacggaa acgacgacgc gtttcgttat tggcttcctg
     4741 atagtaaacg tcatagcccg ccagctggat cacgcgaatg ccaacgtcct gggcgaactg
     4801 gatggcttta cgcataatct ccagcccctg cgcccgcacc gcgtcatctt cgctgcccaa
     4861 cgggaaacga cgatgggcag aaaggcacat ggacggcaca cgcacgccgg tttcaacaat
     4921 cgcattcacc agcgccagac gctgctcgcg gctccagtcg aggcgcgaca ggcgctcgtc
     4981 agtttcatct accgacatct cgacaaaatc gaagcccaac gtttttgcca gtcgcaggcg
     5041 ttccagccag cactccccgg cggggagcgc tttttcatag atgccaagcg ggatttgttt
     5101 ggacaacata tccgctcctt agccccacag ttcggcgatg gaacgtttga actgacgcgc
     5161 ggcttcaacc ggagaagcgg catcacggat gctgcgaccg gcgataaaca catgaattgg
     5221 aatgcctttg aacagcggca gatcttccag cgccaggcca ccggtgacgg tgactttgaa
     5281 gcccatatcg gaaagacgtt tgatcgcagt gatatcggct tcaccccacg ccacgccagc
     5341 ggcctgcgcg tcacggctgc ggtgataaac cacctgctga atacctgcgt cgcgccactg
     5401 ttgcgcctgt tcccaggtcc agtaaccggt cagttcgatc tgcacgtcgc cgttaaactc
     5461 ttttgctacg tccagcgcac ctttggcggt gttgatatcc gcacaacaaa tcacggtcac
     5521 ccagtcagcg ttggcttcga agcacatacg agaaagaatt ttgcccgcat cggcaatttt
     5581 ggcgtctgcc agcacgattt tgtgcgggta gagcgctttc agatcgcgaa ccgcacgcac
     5641 gccttcgccc acgcacagaa tggtacccac ttcgataatg tcgacttctt cggcaatcag
     5701 gcgagtggtt tcgtaggcgc tatccatagt ctggttgtcc agcgcgactt gcaacatcgg
     5761 taatgacatc ttcaattcct tcttaagctg ccgcgttggt gcggtcaatg agatccagta
     5821 cttcctgctc ggtacggcag gcacgtaaac ggtcgaaatt ttcttcatct tcaaacaggt
     5881 tgacgatctg catgatgccc acttcctggt gcgtgttggc atcgaccgcc gccatggtga
     5941 tgaggatatc caccgggtcg ttatcttcgt ggttgaactc cagcggcttt ttcagcgtca
     6001 ccagcgcaaa accggttttc ttaacgccct cttccgggcg accgtgcggc attgccaggc
     6061 ctggtgcgag cacaaagtac ggaccgtgct gttcaaccgc atccagaatc gcctggtagt
     6121 aacgcggctc gacaacatcc gccgccacca gcaggtcaac gccgattttt actgcgtcct
     6181 gccatgtctc agcttcagcc tgcaggcgga tggatttatt ctccgccagc gaatcacgta
     6241 atttcatggc gcgtccttac ttcacatcct gcgggaaatg cgctttgatc acttccagca
     6301 gtttcgggcc aaagtcggca ggagagagca tgttgcgcac gccaaccacg tatttgttgc
     6361 cggtcacggt gatttcgccc gcaatgtgcg tagaagcgat gatgatatcc gcgccgctca
     6421 actcgctttt gtattcgcca accgcgcagc tatttaccgt gtggtcaatg tttgattggg
     6481 ttaaaaactg gtccactttc atcttcatga tcatggaact gccttgtccg ttgccacaca
     6541 cagccagaat acgtacggtc ataatcaaaa ctccttatta agcagactgt tctgccagtt
     6601 gtttttctgc atcttcttct gcgcgcagtg cgcggccagc gaagaacata taagccagtg
     6661 caattacaat gatgacggcc ataaaggcga taccgatgga gaagaagccc tgcatcatcg
     6721 gcggtgccag aatcgaccag tccgccatgc ccatccaggc gctcataccg gtgagtttca
     6781 ccgcccagac gcagccaaag atttcaatca tccccatcac cagacatatc ttcagcgccg
     6841 cacgccagcc gccgaagtgg ttagcgaaca cgccgatggt ggcgttggag aagaacatcg
     6901 ggataaagcc gggaataatc aggatcgagg aaccgcaggc gaccaggatg ccaaccgcaa
     6961 tcagctgacc gatggtgccc cacataaagc cccaaaccac ggcgttcggc gcgaagctat
     7021 agatagccgc acagtcaatc gccagaaccg caccagggat caggcgctgg gagataccgt
     7081 taaatgcttc agagagttcc gccacaaaca tgcgcacgcc ctgagtgatg atgaagatcg
     7141 ccaccgcgaa ggagaaacca gtttgcagga tgtacaccgt ccagttcact ttgcctgcca
     7201 tcgcctgcac ggtgtcgata ccgaaggaga gtagaatggc accaaagaag atggtcatca
     7261 caatcgccgt ggagacgatg ttgtcgtgga aaatattcag ccagcctggc agtttgaggt
     7321 cttcaacgct ttcctctttt ttgccgagga acggcgcaac tttataggca atccatgatg
     7381 caaactgttg ctggtgaccg atggagaaac cgcagccgtc cgtcacttcc tgagtcggct
     7441 tgtacatcat attggaggta atgccccagt agagcgaaac cagaatcgcc gtgcagataa
     7501 tggttgtcca catggagtag ccgaaaataa acaacgtaac ggcaatcagc cccgcctgct
     7561 ggaacatgat atgaccagtc agcatgatgg tacgaatacc ggtaatgcga cgcagcagca
     7621 cgtaacagat gttcagcgcc agcgctaaca acaccgcgta acctacccag ctataggcat
     7681 cgcccatgcg gtcgatggtt gccatcatcg acgcgtaagt atcggaaatt gcgccgttaa
     7741 tgccgtagac ttcggacatt ttcgccacca ccggtttgaa ggtgctggtg aggatgccgg
     7801 accctgcctg caacaacatg aaaccaatta tggttttaat cgtgccttta ataataacgc
     7861 tgacactttt gcgcagtagg atgtagccca gacaggtcac aatacccagc aacaacgggg
     7921 cattggtcat gacctggtta aaaaacacgg taaagatgtt gtagagacga tctcctgaag
     7981 aagaggtaac cgggtattcc gcacacccgg aatgttgtgc actcactcta attttcaaaa
     8041 gcaatcacaa caagattatt tatgattaaa tgtgacgcga cccgcaaata attccatacg
     8101 gatagagtgg gattcacaca acgaaacaat tatttattta aatttagtta aattcattta
     8161 gttaatttaa ctatacattc cattaaatct ttccacactc aaaatcaaca acaacttccc
     8221 tggcaaaaag tcaaaaaatg gtcattgcct tcctgaaaaa atagtgtcag gattaatcaa
     8281 aaccaatcac atattgattc gaattgaact atcatgaagg taaatggcga tgagtaaagt
     8341 gaaaagtatc acccgagaat cctggatcct gagcactttc ccggagtggg gtagctggct
     8401 gaatgaagaa attgaacaag agcaggtcgc ccctggcaca tttgcgatgt ggtggctagg
     8461 ctgcaccggg atctggttga aatcagaagg tggcaccaac gtttgcgttg atttctggtg
     8521 cggcactggc aaacaaagtc acggtaaccc gttaatgaaa cagggtcacc agatgcagcg
     8581 catggctggc gtgaaaaaac tgcagccaaa cctacgcacc cccccgtttg ttcttgatcc
     8641 gtttgcgatt cgccagatcg acgcggtact ggcgactcac gatcacaacg atcatatcga
     8701 cgttaacgtc gctgctgccg tgatgcagaa ctgtgctgat gacgtaccat tcattggacc
     8761 gaaaacctgc gttgatttgt ggattggctg gggcgtaccg aaagagcgtt gcatcgtggt
     8821 caaaccgggc gatgtggtga aagtgaaaga cattgaaatt catgcgcttg atgctttcga
     8881 ccgtactgca ctgatcaccc tgcctgccga tcaaaaagcg gctggcgtac tgccggacgg
     8941 catggacgat cgcgcggtga actatctgtt caaaacgcct ggcggctccc tgtatcacag
     9001 cggcgactcc cactactcta actattatgc gaagcacggt aacgaacatc agatcgacgt
     9061 ggctttaggt tcatacggcg aaaacccgcg cggtatcacc gacaaaatga ccagcgccga
     9121 tatgctgcgt atgggtgaag ccctgaatgc gaaagtggtt atcccgttcc accacgatat
     9181 ctggtcaaac ttccaggccg ctccgcaaga gatccgcgtg cagtgggaga tgaaaaaaga
     9241 tcgtctgaag tatggcttca agccgtttat ctggcaggtt ggcggcaaat ttacctggcc
     9301 actggataaa gacaacttcg agtaccacta tccgcgcggt ttcgatgatt gcttcactat
     9361 tgaaccggat ctgccgttca aatcattcct gtaatctgtc gtttataccg gatagcgtgg
     9421 agaagttcgc gctatccggc gtagtatttc ctggctattt caaatatcat ctaaaaaaat
     9481 caaattttat cggaatagct catgactgaa gcacaaagac atcaaatcct cctggaaatg
     9541 ctcgcacaat tgggctttgt gaccgttgag aaagtcgttg agcgtctggg aatttcgcct
     9601 gccactgcgc gacgcgatat caataaactt gacgaaagcg gcaaactcaa aaaggtgcgc
     9661 aatggcgcag aagctattac ccaacagcgc ccgcgctgga cgccgatgaa tctgcatcag
     9721 gcgcagaatc acgatgaaaa agtacgtatt gctaaagcgg cctcgcagct ggttaatccg
     9781 ggcgaaagcg tagtcatcaa ctgcggctcc accgcgtttc tgcttgggcg ggaaatgtgt
     9841 ggcaagccag tgcaaatcat cactaattat ctaccgctgg caaattacct gatcgatcaa
     9901 gaacatgaca gcgtgatcat tatgggtgga cagtacaaca aaagtcagtc catcacttta
     9961 agcccgcagg gcagcgaaaa cagtctctat gccgggcact ggatgtttac cagcggaaaa
    10021 gggctgaccg cagaagggtt gtataaaacc gatatgctga cagcaatggc agagcagaag
    10081 atgctgagcg tggtagggaa actggtggta ctggttgata gcagtaagat tggcgaacgc
    10141 gcgggaatgc tttttagccg tgccgatcaa atcgatatgc ttatcaccgg caaaaatgct
    10201 aacccggaaa tcctgcaaca actggaagcg caaggggtca gcattctgcg tgtttaaaga
    10261 tgctggcgga aaaatgtcac ggcagcatct aacgcctcag gcgtaatgcg gtgacgcacg
    10321 cctggctgcc atgaacaggt tagcagttta tcccgtcccg tctcgcttaa ggcctgctgc
    10381 aaacgtagtg attcgtcggc aggcacaacg tcatcgtcga ggccatgcca cagcagtaga
    10441 ggtctgtccc caagttgttc caggtggttt gtcgcttccc actctgccag cggcgcgata
    10501 atgttattga attcattctg ctgtgctgcc gtttcaggta tcagcggtgg aaacagtgaa
    10561 cgggcgagcg atgtaaaata gcccgatccc atcatgctgg cggtacattt caccgtgggg
    10621 tggcgagcgg taattcccag tgccgtcatc gcgcccatcg acgcgccacc gactgccaga
    10681 cggtcatcaa gcagccagtt ttcttcggct attgccgcac gtaaagtagt gaattcctgc
    10741 atactttgta gcaagatttg ccagaattga tttaaccgcc gcgcttcgtc gctactaaaa
    10801 cggctaccgt gatcgggcgc atccggcatg atcacccgca aaccagcctg cgccagcgca
    10861 acggcaaaat agctatacac caggctggat gaagtaaagc cgtgataaaa aattacgcac
    10921 ggtaacgggg tatctttttg cccgacagga taagcatgaa gaacgggaat atctgccagc
    10981 tcgcgtgatt ctatttcaat catctgtctc tcctttttgt ctggtatgac atgaagaaat
    11041 ccttagcaca agtttctgct ggcggtatta gttcataatg ttgagatgtg ggttacgctt
    11101 tcgtcacgtt ttcattcgaa aatcgcgtac caggtaacaa ttcgggaaca ttcccccaaa
    11161 gttaaattaa taaggcacta cactatggtt agcaggaaac gtaatagcgt tatttaccgg
    11221 tttgcctgtt tattattggt gttgatgtta agtgcctgta gcgcactgca aggtacgcca
    11281 cagccagcac cgccagtaac gaaccatccg caagagattc gccgcgacca gacgcaaggg
    11341 ttacagcgaa taggtagcgt aagcacgatg gttcggggtt ctccggatga cgcattagca
    11401 gaaatcagag caaaagctgt cgctgcaaaa gctgattatt acgttgtcgt catggtggac
    11461 gaaaccatcg tgacaggaca gtggtattca caagccattt tgtaccgtaa ataaatcaga
    11521 caacttacat agtcagcttt acattgcttt gcgtccctat gcgtttacct gtgcacaata
    11581 aattaccggc tggaagcctg ggcgtttatt accgcgatgg aatgccctgc aacatgtggg
    11641 gaaacgaaaa atggagctga cgatgaaaca attacttgct tcaccctcgc tgcaattagt
    11701 gacttatcct gcgagcgcca cggcacagtc tgcagaattc gccagtgctg actgcgtgac
    11761 gggcctgaat gaaataggtc agatctcagt tagcaatatt tcaggggatc cgcaggacgt
    11821 ggaacgtatc gtggcgttaa aggccgatga acaaggtgcg tcatggtacc gcattattac
    11881 catgtacgaa gaccagcagc ctgataactg gcgcgtacag gcgatactgt atgcatgagt
    11941 gtcatctaca gcaaatgaac aatgccggat tcggcgcgag cgccttgtcc ggcctacaat
    12001 tttcacatat ttcattgagt taatcgaaac cagcgtcgca tcagtcgtat acgcttacac
    12061 acacactccc cccgtcgccc gcagcaataa atcattctgg atctgctctg acaaccgtac
    12121 gccgccgcgc gtatctaaca tcacctgaca ccacgcctgc gccattggcg gagaagcata
    12181 tttcaacatt tgcgcaccgc agcccagcag gaatagctga tgagtaatct ctcgccccag
    12241 ttcttcagct ggcttacgca gctgctgctg taaacgacga accgcgcgat caaaatagcg
    12301 atcctgccct ttcacttcca caaatgcttc cgacaataag tcgtatacgc ccgcttgctt
    12361 attgagaacg cgcaacacat ccaggcacat aatattgccg gaaccttccc aaatactgtt
    12421 taccggcatc tcccggtaaa gccgcggcag ctcgctctcc tcgcaataac caatgccgcc
    12481 cagcacctcc atcgcttcgg ccacaaacgg catacctctt ttgcagatca caaattttgc
    12541 cgcaggcgta aataaacgcg cccacagggc ttctttggca tcggcacgcc ggtcccacgc
    12601 tcgcgcaaga cgaaacagca acgccgtttg cccttcaagc tgaagtgcca tgcgacttaa
    12661 gacatgacac ataaggggct gttggatcaa tggattacca aaaacatggc gttgatgtgc
    12721 atgataaatc gccagcgaaa atgcacggcg catcatggca tggctaccca gggcgcaatc
    12781 aaaacgcgtc atcccaccca ttttcaggat cagacgaatt ccttcccctt cctgccccaa
    12841 caaccagcca atggcatcct gaaactccac ttcgcaactg gcgttagagc gattacccag
    12901 cttatctttc agccgctcga ggcgaatcgc gttgcgttgc ccatcaggca aaaagcgcgg
    12961 cacaaaaaag caggacaaac cgcccgtagt ctgcgccagc accagatgcg catcgctttg
    13021 cggcaccgag aaaaaccatt tatgccccac cagccgataa gagccatctt ccagacgctc
    13081 tgcacgggtg gtgttgctca tgacatcgga accgccctgc ttttccgtca ttcccatgcc
    13141 aatcaacaaa ccgcgttttt gcccacctgg caataagaga gaatcgtagc gatcgctcag
    13201 cagcggcgtg gtccagtcct gaaacggcgt gggtaacatc tgtaacaaca atggcgtggc
    13261 ggcaaaggtc atcgttattg gacataacga cccagcctca acctgcgcat gtaacataaa
    13321 acgcgccgcg cgcgccacaa atgcgccgga gcgagcgtct tcttcccagg caagattgtg
    13381 cacccgattg gtacataacg cctgcatcag caggtgccag gcggggtgaa aacgcacatc
    13441 gtccagacgg cgtccttgcg catcgtagcg caataattca ggcggattca cattcgccag
    13501 ccgccccagt tcaagagatt cagccgttcc taactgctga ccaatactgg ctagaaaatc
    13561 gctatcccag ccagcacctt cacgcgttac cgcttcacag agcgcgccat cagacaggta
    13621 taagttgctg ttatttaatg gtataggttg attaaaaacg gtgtgagttt gccagtgcac
    13681 tgtgtctccc tccatcaatg gcagtcaccc ttagtatggt cactgccatg gattcctgac
    13741 agaaagagat tgctaaaaca ttcttatcca gcaatgtaat gcggaacgaa acgtgaggtg
    13801 tctttggtga tcagcgtgtt atcttcacgg atccccattc cgcacgcttc atcatcgaca
    13861 atccagctac cgatgagtgt gtagctatcg ccaaatcgcg gcagaggttg aaacgcctgg
    13921 tagatcatcg gttcatcggc gtaatcacca tcagcgtggt caacgacgtt attctgaccg
    13981 tcgaaaatgg tgacgtttcc gccttcgcgt gagtagatcg gtttacgcac atagctttcg
    14041 ccagcggcaa tctgcggttt ttcgccctca aaccaggatg caagaaggtt aggatgacca
    14101 ggaaagaagc gccaaagcag cggcattagc cctttattac tcaagatact tttccataac
    14161 ggctccaccc attgctcgcg acgcttgcgc agcagcggac cgttatcgtc acgcatcatc
    14221 cactccagcg gatacagctt aaatgcacgc tggatgacat tatcatcaag atcggtcagt
    14281 acgccgccga cgcccaaacc gagatcttca atgtagataa accgcgactc ctgccctgcc
    14341 tgctgggcgc agtcctgcaa gtacagcacg gtactcctgt cttcatcggt gtcctgacag
    14401 cagcaaaaat aaaacggttc ccgactgtaa agctcactaa agcgcgaaat caggcgttcc
    14461 tgaatggcgt tgtactccag cagcttcacc ggcgcattgc cacaccaggc aaaatccatc
    14521 cggccataca gcgaaggatc gcgtgcgcgc cagctttcgg cgatcacatc ccagtacaac
    14581 ggcgggatcg ccagttgcgt caggatctct tcgtctttaa ccgcgcgatc caccacctca
    14641 aggcacatct gatgcagttc cgcagtcggt ttttcgatct gctcttcaat ctggcgcaga
    14701 gtaaaacggt aagcccgact ctcgtcccaa tagatttcat tgtcgatgat atgaaagtcg
    14761 aaaccgttgt tagcggcgat ctggtccaga tcccgtcgca caggaacgtt gtgtctcagc
    14821 atgattagcc tccccaatgc ccacgggcgc tggaagaacg accatagccg ccgcgcgaaa
    14881 cggttgacgc ttttttggtg gtaaagccgc ctgaagagta agactctttt ttgccagaac
    14941 cggagcgcca ggagtaatca ccggaagtgt tgagccagac ggggcgggaa gcaaatgagg
    15001 atccgccgct gttatagacg aacggctcat cgcgatcttt acgaataacc cggcttaaca
    15061 aaaatccaga aacgaccggg atccaactct gttcaacatt gtcgtagtag caattttcgt
    15121 acttagactg acaattctgc tgagtcatat tcttcggaac atcggcataa aatgccgctt
    15181 tggtgttgtt ccagccacgc gcgcaaatgt cggcattatt accgtcatca atacaatcct
    15241 gcactgtcga ataaaacgtt ccgtcgccgt cgttatcgac atcgccacta tcgccacaac
    15301 ctttcaatac aaaaaaagcg gcaccgccca ttagcgccaa cgttaagtat ttttgtgcgt
    15361 agcgattgcg acgcggttca aaaggattat tcggtctacc aatgcgactg atcgctccgt
    15421 gaccaatttt actgttattt cttgatttgc gttttctggc catgatcgtc cattaccatg
    15481 tcatacaagc tgcgttaaaa ataccgccag ccagcgcggc ggttcccata aacattcctg
    15541 ctgcggtatt gtgattaata attttttcgc ttaatgcggg catataaagt ctgacaccag
    15601 caaaaacgag taactgaatc accagtgcaa tcccgcccca ggcgaaatag tctggaatac
    15661 tcaccgcatt gattgccgca ctggataagg ggatcacgta acccaacaat gtaccgctga
    15721 atgccagtga caccgcggta ttattgtttt tgattaattg ccattcgttg tgcggtgtaa
    15781 ttttggagta gataaacaga aaaataatca ccatagccac gccaataaaa aaataggcac
    15841 taaaggcaag aagtgaatcc agtatatgca ttgtaaacgt ccttgtaatt aaccaataat
    15901 atgaagtgat gtcagcggga tatcgacacc caacgcgcgc gaaaataacc actctggctc
    15961 gccgagatcg ttaaaagatt cctcaccatt taacagtaaa tattcgtaag tatcttcggt
    16021 tacttgccgc tggtagccca tggtaaaatt atggacctcc catttggcat ggttttgatt
    16081 ttctactttt tccagcatgt agacgggttc gatatttccc ggttcttcgc tgttaaaaaa
    16141 tcgctgccag cgtttttcct gccagtttaa ggtcattgcc cccatcgttt tggcgttgat
    16201 cgcctcgcgc cagtgactct ctttactgat accgtagctc tcttcataga caaagagctt
    16261 gatatcatca atgtcatcaa tatcttcgcc gccggtggta ttgatttgca gaaattcatc
    16321 gcctgaagtg tagtaacgga aaatctggct accgcctccc agatcgatgc ggctgacagc
    16381 ggctaccgta aattcctcac ccggtagcgc aatcagcaat tcatcttcca gcaaacgaaa
    16441 cgctaacgtg tcgagcgtaa agccactatt gagatgaagt cccagcggac cgcgagcgat
    16501 agcaggctta ttatccttgc caaacagacg ctggaaaaaa ccagacatat tttatcctta
    16561 aaatagttgc cagcctttta gcgaggctgg caaaaaaatt actcgccctg ttggcgttgc
    16621 agtcttgcta atacatcctg ggctctactt ttattgctac cgccaattcc ggcttccgcc
    16681 agcttttcgt caaggtcgcg accgtctgcg actttctcca actgtgcggc agcatccagg
    16741 cgagcctgac gttcggcctg acgcgtttgc aggcgtttta aggattctgc cgctgtcgaa
    16801 acgctggaag atgcgccaac ggtagaggtt gttacagcct gttgtgcacg ctgcatggct
    16861 tcagtggctt taacgacttc catttgctgc tcaaactgag cgatacgctg cgctgtcgct
    16921 gtaactgctt tttccacgcc atcacgggag acttccagat tcgacaacac ttgctcttca
    16981 gcggtaatga gattctcaag gcgcgcgatt tcttcagcaa cttcgttaat caacgacgga
    17041 ttaacgttct tgcttaacgc ttccagcgca cgggcttcca gactggcttt gcgctcacgt
    17101 aaatctttca gcttatcgtg acttaatttc acccgcgcca gcagatcaac gcgagatttt
    17161 ccggctttat cgagttcagc tttagcgtca cgaatatgct gttccagcat gcgcacgccc
    17221 tgggtttctt caatggattc ttccgcctgg gagataaacg atttccccag cgtaaataaa
    17281 ctttttaaaa ttcccataaa tacccgtcct tgtaattagt gtgaatattc ttctgtaatt
    17341 tcagccagat ccaatgcgtt atctaccagc taggttatct caagcaggat atcttcaaga
    17401 gaagatttaa gcgataacgc cccgaaaaca atgtaatact cttcctgttg cacgctggag
    17461 attcctaccg atgacaacgg catcatcttc tgatt
//
LOCUS       DAJVUK010000086        17495 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.086, whole genome shotgun sequence.
ACCESSION   DAJVUK010000086 DAJVUK010000000
VERSION     DAJVUK010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17495
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.086"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..640)
                     /locus_tag="OQQ57_002591"
     CDS             complement(<1..640)
                     /locus_tag="OQQ57_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HCS1957308.1"
                     /translation="MSLNFTVIVWLRLSIGGVYELAFCRSSLKSKKYFIILLALAAIA
                     GLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKG
                     TQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAI
                     KDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLD"
     gene            891..2030
                     /gene="arnB"
                     /locus_tag="OQQ57_002592"
     CDS             891..2030
                     /gene="arnB"
                     /locus_tag="OQQ57_002592"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HCS1957309.1"
                     /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ
                     LTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV
                     DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG
                     TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR
                     QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPF
                     QPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYR
                     ERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
     gene            2034..3002
                     /gene="arnC"
                     /locus_tag="OQQ57_002593"
     CDS             2034..3002
                     /gene="arnC"
                     /locus_tag="OQQ57_002593"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HCS1957310.1"
                     /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
                     LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD
                     LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG
                     CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI
                     NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
     gene            3002..4984
                     /gene="arnA"
                     /locus_tag="OQQ57_002594"
     CDS             3002..4984
                     /gene="arnA"
                     /locus_tag="OQQ57_002594"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HCS1957311.1"
                     /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS
                     VAHLAAERGIPVYAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFN
                     LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAIT
                     LHHKLCHATRQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH
                     NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISIAPLLIACGDGALEI
                     VTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTER
                     LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS
                     SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG
                     NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR
                     NAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS"
     gene            4981..5871
                     /locus_tag="OQQ57_002595"
     CDS             4981..5871
                     /locus_tag="OQQ57_002595"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HCS1957312.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE
                     AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKTEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            5871..7523
                     /gene="arnT"
                     /locus_tag="OQQ57_002596"
     CDS             5871..7523
                     /gene="arnT"
                     /locus_tag="OQQ57_002596"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HCS1957313.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQREPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            7520..7855
                     /gene="arnE"
                     /locus_tag="OQQ57_002597"
     CDS             7520..7855
                     /gene="arnE"
                     /locus_tag="OQQ57_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HCS1957314.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            7855..8241
                     /gene="arnF"
                     /locus_tag="OQQ57_002598"
     CDS             7855..8241
                     /gene="arnF"
                     /locus_tag="OQQ57_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311173.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HCS1957315.1"
                     /translation="MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
                     LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
                     LKALLGVACIMSGLMLIFLPTTKQRY"
     gene            complement(8235..8501)
                     /gene="pmrD"
                     /locus_tag="OQQ57_002599"
     CDS             complement(8235..8501)
                     /gene="pmrD"
                     /locus_tag="OQQ57_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416762.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HCS1957316.1"
                     /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD
                     LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCTAAGKTQ"
     gene            complement(8611..9966)
                     /gene="menE"
                     /locus_tag="OQQ57_002600"
     CDS             complement(8611..9966)
                     /gene="menE"
                     /locus_tag="OQQ57_002600"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HCS1957317.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELATGF
                     AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQY
                     ALVLEGENTFPALTSLHIQMVEGTHSALWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLLFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(9963..10925)
                     /gene="menC"
                     /locus_tag="OQQ57_002601"
     CDS             complement(9963..10925)
                     /gene="menC"
                     /locus_tag="OQQ57_002601"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HCS1957318.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELLQMPSIAFGVSCALAELADTLPQAA
                     NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALRLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(10925..11782)
                     /gene="menB"
                     /locus_tag="OQQ57_002602"
     CDS             complement(10925..11782)
                     /gene="menB"
                     /locus_tag="OQQ57_002602"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HCS1957319.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNVGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(11797..12555)
                     /gene="menH"
                     /locus_tag="OQQ57_002603"
     CDS             complement(11797..12555)
                     /gene="menH"
                     /locus_tag="OQQ57_002603"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HCS1957320.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(12552..14222)
                     /gene="menD"
                     /locus_tag="OQQ57_002604"
     CDS             complement(12552..14222)
                     /gene="menD"
                     /locus_tag="OQQ57_002604"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HCS1957321.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPSLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
     gene            complement(14311..15606)
                     /gene="menF"
                     /locus_tag="OQQ57_002605"
     CDS             complement(14311..15606)
                     /gene="menF"
                     /locus_tag="OQQ57_002605"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HCS1957322.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGDEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLEEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(15685..15990)
                     /gene="elaB"
                     /locus_tag="OQQ57_002606"
     CDS             complement(15685..15990)
                     /gene="elaB"
                     /locus_tag="OQQ57_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HCS1957323.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQVSDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(16045..16506)
                     /locus_tag="OQQ57_002607"
     CDS             complement(16045..16506)
                     /locus_tag="OQQ57_002607"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1957324.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLDT
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            16571..17488
                     /gene="rbn"
                     /locus_tag="OQQ57_002608"
     CDS             16571..17488
                     /gene="rbn"
                     /locus_tag="OQQ57_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HCS1957325.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
BASE COUNT         4114 a         4695 c         4438 g         4248 t
ORIGIN      
        1 catccagata aactttgcct ttttccacat gcatgactaa accatccaga taatcaggtt
       61 taaatgtcgc atcacgctta tttttagcaa tatatgtcag gcaatgatta tgggtgaaaa
      121 taacgatatt tttatcaggc gctttgcttt gtaagtcctt aattgcacta taaatctcat
      181 taccgcactg aagaagtcgt ttatctaccg tcagcttttt acccgcggaa aaccaggtcg
      241 ccgactgaat ggtccggacg gtattactgg aataaagatc gaaatcaggg atgtcagcgc
      301 taaaagcgtt gcccagttca cgggcatcct gggtaccttt aaccgtaata cctgttttat
      361 ctgacaagca ttgattggtt gaacgatcgc aacgttcagc atggcgaaac aaaacgacaa
      421 ccgggtgctg ctgtgccagt ctggccaatg ttttattgtc gatacgtggc aaaccattgc
      481 tactccaggc ggcatgagta cccagtccgg caattgcagc gagcgccagt aaaatgatga
      541 aatatttttt tgacttcaat gatgagcggc aaaaagctaa ctcgtaaact ccacctatag
      601 acaagcgcaa ccagacaatt accgtgaaat tgagcgacat ttctggcgat aattagcagt
      661 tggtgtaata ttaaaaatcc tacgatgtcg gcaaaatgcc tcaaaatttt gccaaatgca
      721 aagcctaaat aagaaaaaat ataaaaattt caatatttac gtctaatatt agtttcttaa
      781 ggttaagtta atattctatc cttaaaattt cgttccaaat ggcaaaatat acacaacact
      841 ctttatagca aatataagtg gacaggtatt caatggcgga aggaaaagca atgtcagaat
      901 ttttgccttt ttcgcgacca gcaatgggcg tggaggaact cgctgcagtt aaagaagttc
      961 tcgaatccgg ttggatcaca accggtccga agaatcaggc gcttgagcaa gccttttgcc
     1021 agttgacggg aaatcagcat gccatcgcgg tcagttcagc caccgccgga atgcatatca
     1081 cgctaatggc gttggaaatt ggcaagggcg atgaagtgat tacgccttcc ctgacctggg
     1141 tttcaaccct caatatgatt tccttgttgg gtgcaacgcc ggtaatggtg gatgtcgacc
     1201 gcgatacgct gatggtcacg cctgaagcga tcgagtcagc cattacgcca cgcactaaag
     1261 ccatcattcc ggtgcattat gccggtgcgc cagcagatat tgacgccatt cgcgccattg
     1321 gcgaacgtta cggcatcgca gttatcgaag atgctgccca tgccgtcggt acgtattaca
     1381 aagggcgaca tattggcgca aaaggtaccg ctattttttc atttcatgcc attaaaaata
     1441 ttacctgtgc ggaaggtggc ctgattgtaa ctgataatga aaaccttgcc cgccagctac
     1501 ggatgctgaa atttcacggc ctgggtgtcg atgcctatga cagacaaacc tggggccgag
     1561 caccgcaggc tgaagtctta acaccgggct ataagtacaa tctgaccgat attaacgccg
     1621 caattgccct gacacagtta gcaaaattag agcacctcaa cacccgtcgg cgcgaaattg
     1681 cccagcaata tcagcaagca ctggctgctc tcccctttca gccattaagc cttcccgcct
     1741 ggccgcacgt tcacgcctgg catctgttta ttattcgtgt cgatgaacaa cgttgtggta
     1801 tcagtcgcga tgcgttgatg gaagcgttaa aagaaagagg cattggtacc gggttacatt
     1861 tccgcgccgc tcacacacaa aaatattatc gcgagcgttt tcccacgctg tcgttaccga
     1921 ataccgaatg gaatagcgaa cgcatctgtt ctttgccgct gttcccggat atgactaccg
     1981 ccgatgccga ccgtgtcatc acagcccttc agcaactcgc aggacaataa gccatgtttg
     2041 aaatccaccc tgttaagaaa gtctcggtgg ttattcccgt ttataacgag caggaaagct
     2101 taccggaatt aatcaggcgc accaccacag cctgtgaatc gttggggaaa gagtatgaga
     2161 tcctgctgat tgatgacggc agtagcgata attccgcgca tatgctggtc gaagcctcac
     2221 aagcggagaa cagccatatt gtgtctattt tgcttaaccg caattacggg caacattcag
     2281 cgattatggc gggattcagt cacgttactg gcgacttaat tattaccctt gatgccgatc
     2341 tccagaatcc gccagaagaa atcccccgcc tagtggcaaa agccgatgaa ggttacgacg
     2401 tggtagggac tgtacgccag aaccgccagg acagctggtt tcgtaaaaca gcttcgaaga
     2461 tgattaaccg gcttattcag cgcaccaccg gcaaagcgat gggtgactac ggttgtatgc
     2521 tgcgcgccta tcgccgtcat attgtcgatg cgatgttgca ctgccatgaa cgtagcacct
     2581 ttatcccgat tctggcgaat atcttcgccc gccgtgccat tgaaattcca gtacatcatg
     2641 ccgagcgtga gtttggtgaa tccaaataca gttttatgcg cctgattaat ttgatgtacg
     2701 acctggtgac ctgccttacc acaacgccgc tacgtatgct gagtctgctc ggcagcatta
     2761 ttgcgattgg aggttttagc attgcggtgc tgctggtgat tttacgcctg accttcggac
     2821 cacaatgggc ggcagaaggc gtctttatgc tatttgccgt gctgtttact tttattggcg
     2881 ctcagtttat cggcatggga ttactcggtg aatatatcgg caggatctac accgatgtcc
     2941 gcgcccgccc ccgctatttt gttcagcaag ttatccgtcc atccagcaag gaaaatgaat
     3001 aatgaaaacc gtcgtttttg cctaccacga tatgggatgc ctcggtattg aagctctgct
     3061 ggctgccggt tacgaaatta gcgccatttt tacccatacc gataatcccg gtgaaaaagc
     3121 cttttatggt tcggtggctc atctggcggc ggaaagaggc attccggttt atgcgccgga
     3181 taacgttaat catccgctgt gggtggaacg cattgcccaa ctgtcaccag aggtgatttt
     3241 ctctttttat tatcgccatc ttatttgcga cgagattttg cagctcgctc ccgcaggtgc
     3301 atttaatctg cacggttcgc tgttaccaaa atatcgtggt cgcgcgccgc tgaactgggt
     3361 gctggtgaac ggtgaaacgg aaacgggcgt tacattgcac cgaatggtaa aacgtgccga
     3421 tgctggggcc attgtggcgc aactgcgcgt tgccattgcg ccagacgata tcgctattac
     3481 gctgcatcat aaattgtgcc atgccacgcg ccagctactg gaacagacat tacccgccat
     3541 taaacacggt aatattctgg aaatcgccca gcgcgaaaac gaagccacct gttttggtcg
     3601 cagaacgccg gatgacagtt tccttgaatg gcataaaccg gcatccgtac tgcacaacat
     3661 ggtacgtgcc gttgccgatc cgtggccggg tgccttcagc tatgttggca atcagaaatt
     3721 caccgtctgg tcgtcgcgtg ttcatcctca tgccagcaaa gcacagccgg ggagcgtgat
     3781 ttctattgca ccgctgttga ttgcctgtgg cgatggcgcg ctggaaatcg tcaccggaca
     3841 ggcgggcgac ggcattacta tgcagggctc gcaattagcg cagacgctgg gcctggtgca
     3901 aggttcacgc ttgaatagcc agcctgcctg caccgcccga cgccgtaccc gggtactcat
     3961 cctcggggtg aatggcttta ttggcaacca tctgacagaa cgcctgctgc gcgaagatca
     4021 ttatgaagtt tacggtctgg atattggcag cgatgcgata agccgttttc tgaatcatcc
     4081 gcattttcac tttgttgaag gcgatatcag tattcattcc gaatggattg agtatcatgt
     4141 caaaaaatgt gatgtcgtct tgccgctggt ggcgatagcc acgccgattg aatatacccg
     4201 caacccgctg cgcgtatttg aactcgattt tgaagagaat ctgcgcatta tccgctactg
     4261 cgtgaagtac cgtaagcgaa tcatcttccc gtcaacttca gaagtttatg ggatgtgtag
     4321 cgataaatac ttcgatgagg accattctaa tttaatcgtc ggcccggtga ataaaccacg
     4381 ctggatttat tcggtatcaa aacaattact tgatcgggtg atctgggcct atggcgaaaa
     4441 agagggttta cagttcaccc tcttccgccc gtttaactgg atgggaccac gactggataa
     4501 ccttaatgcg gcacgaatcg gcagctcccg cgctattacg caactcattc tcaatctggt
     4561 agaaggttca ccgattaagc tgattgatgg cggaaaacaa aaacgctgct ttactgatat
     4621 tcgcgatggt atcgaggcgt tataccgcat tatcgaaaat gcgggaaatc gctgcgacgg
     4681 tgaaattatc aacattggca atcctgagaa cgaagcgagc attgaggaac tgggcgagat
     4741 gctgctggcg agcttcgaaa aacatccgct gcgccatcat ttcccaccgt ttgcgggctt
     4801 tcgcgttgtc gaaagtagca gctactacgg caaaggatat caggacgtag agcatcgtaa
     4861 accgagcatc cgcaatgccc accgctgcct ggactgggag ccgaaaattg atatgcagga
     4921 aaccatcgac gaaacgctgg atttcttcct gcgcaccgtt gatcttacgg ataaaccatc
     4981 atgaccaaag taggcttacg cattgatgtc gatacctttc gtggcacccg tgaaggcgtg
     5041 ccgcgtctgc tggaaatctt gagtaagcat aatattcagg ccagcatttt tttcagcgtc
     5101 ggcccggaca atatgggccg ccatctctgg cgactggtga agccacagtt tttgtggaag
     5161 atgctgcgct caaacgcggc atcgctttat ggctgggata ttttactggc aggtacggcc
     5221 tggccaggta aagagattgg tcatgccaat gccgatatca ttcgtgaagc ggctaaacat
     5281 cacgaagtcg gcctgcacgc ctgggatcac catgcctggc aagcccgtag cggtaactgg
     5341 gatcggcaaa caatgatcga cgatattgca cgcggtcttc gcactctgga agagattatc
     5401 ggtcaaccgg taacctgttc tgccgctgcg ggctggcgtg ccgaccagaa ggtgatcgaa
     5461 gcaaaagaag cgttccattt gcgctacaac agcgattgtc gtggggccat gccgttccgt
     5521 ccattgctcg aatcaggaaa ccctggcact gcgcaaattc cggtgacctt acccacctgg
     5581 gatgaagtga ttggtcggga tgtgaaaaca gaagatttta acggttggtt actcaaccgc
     5641 atcctgcgag ataaaggcac gccggtttat accattcatg cagaagttga aggctgcgct
     5701 tatcagcata attttgtgga tctcctcaaa cgcgcagctc aggaaggcgt gacattttgc
     5761 cctttaagcg aactgttatc agagacgttg ccgctcggac aagttgttcg cggaaatatt
     5821 gccggacgtg aaggctggct gggttgccaa caaattgcgg gtagtcgctg atgaaatcgg
     5881 tacgttacct tatcggcctc ttcgcgttta ttgcctgcta ttacctgtta ccgatcagca
     5941 cgcgtctgct ctggcaaccc gatgaaacgc gttatgcgga aatcagtcga gaaatgctgg
     6001 catccggcga ctggattgtg ccccatctgt tagggctacg ttatttcgaa aaacccattg
     6061 ccggatactg gattaacagc attgggcaat ggctatttgg cgcgaataac tttggtgtgc
     6121 gggcaggcgt tatctttgcg accctgttaa ctgccgcgct ggtgacctgg tttactctgc
     6181 gcttatggcg cgataaacgt ctggctctac tcgccacagt aatttatctc tcattgttta
     6241 ttgtctatgc catcggcact tatgccgtgc tcgatccgtt tattgcattc tggctggtgg
     6301 cgggaatgtg cagcttctgg ctggcaatgc aggcacagac gtggaaaggc aaaagcgcag
     6361 gatttttact gctgggaatc acctgcggca tgggggtgat gaccaaaggt tttctcgccc
     6421 ttgccgtgcc ggtattaagc gtgctgccat gggtagcgac gcaaaaacgc tggaaagatc
     6481 tctttattta cggctggctg gcggttatca gttgcgtact gacggttctc ccttggggac
     6541 tggcgatagc gcagcgggag cctgacttct ggcactattt tttctgggtt gagcatattc
     6601 aacgctttgc actggatgat gcccaacata gagctccgtt ctggtactac gtgccggtca
     6661 tcattgccgg tagcctgccg tggctgggat tactccccgg tgcactgtac acaggctgga
     6721 aaaaccgcaa gcattccgca accgtctatt tgttgagctg gacgataatg ccgctgctgt
     6781 ttttctccgt cgctaaaggt aaattgccca cctatattct ttcctgcttt gcatctctgg
     6841 caatgctgat ggcgcattac gctttgctgg cagcaaaaaa taatcctctg gcgctgcgga
     6901 ttaatggctg gattaacatc gcttttggcg tcactggcat tattgccaca tttgtggtct
     6961 ccccgtgggg accaatgaac acgccggtgt ggcaaacctt cgagagctat aaagtctttt
     7021 gtgcctggtc gattttttcg ctatgggcat ttttcggctg gtacacctta acaaacgtcg
     7081 aaaagacctg gtctttcgcc gcgctttgcc cgctggggct ggcgttgctg gtaggatttt
     7141 caattcctga cagagtcatg gaaggaaaac atccgcaatt ttttgtcgag atgacacaag
     7201 aatcacttca accaagccgc tatattctta ctgatagcgt cggtgttgcc gcaggtctgg
     7261 catggagcct gcaacgcgat gacatcatca tgtatcgcca gacaggtgag ttgaaatacg
     7321 gccttaatta tccggatgcg aaagggagat ttgtcagcgg tgatgagttc gcaaactggc
     7381 ttaatcaaca tcgtcaggag gggattatta cactcgtgct ttcggttgac cgcgatgaag
     7441 atatcaacag tctcgccatt ccgcccgcag atgccatcga tcgtcaggag cgtctggtgc
     7501 tgattcagta tcgtcccaaa tgatctggct aacattagtc tttgccagct tgcttagcgt
     7561 tgccgggcag ttgtgtcaga aacaggcaac ctgctttgtg gcgataaaca aacggcgcaa
     7621 acatatcgtg ctgtggctgg gactggcgct ggcttgtctt ggtcttgcca tggtgctctg
     7681 gctgctggtc ttgcagaacg taccggtagg cattgcctac ccgatgttaa gtctgaattt
     7741 tgtctgggtg acgctggctg cagtaaaact gtggcacgaa ccggtatcgc cgcgtcactg
     7801 gtgtggggtg gcgttcatta ttggtggcat tgtgatcctc gggagtacgg tgtaatgggc
     7861 ctgatatggg gattattcag cgtcattatt gcctcagttg cgcaattaag cctgggtttt
     7921 gcggcaagtc atctgccgcc gatgacgcac ttatgggatt ttatcgcggc tctgttagct
     7981 tttggcctgg atgcccggat actgttactc gggctgctgg gttatctgct ttccgttttt
     8041 tgttggtata aaacgctaca taaacttgcg ctaagcaaag cctatgcctt gctcagtatg
     8101 agttatgtgc tggtatggat tgcttcaatg gtacttcccg gctgggaagg gactttttcg
     8161 ctgaaagcac tactgggagt agcctgtatt atgagcgggt tgatgctgat tttcctgccc
     8221 acgacaaaac aacgttactg agttttccct gccgctgtac actgccgttc ccactcatcg
     8281 gggctataac tgcttgccga gaggactttc accgtatgca gcttttcacg attaatacaa
     8341 taaagcgcat tctgcaaagg cgagagtaaa tcccccactt tcacggcgaa gtcactcttc
     8401 acttcggcga tcatttttat cgcgccgcca gcatcgcaga gcataagtac atgtctgtta
     8461 tcttgtttat tgcagcacga ttttttgacc agccattcca ttgcattatc ctgtttgcta
     8521 agagttttca catcaattta cagattaaca gataaactct ttatcaacgg caatggaatg
     8581 gcagaaatga gaagtgaaac ggagggttaa ttattgctga cgttgcaccc actcttttag
     8641 cgcctgacgt gaaattttaa taccgccgtt tttcagctcc ggcggtaaag tcagccagcg
     8701 caccggttgt tgaaaacgag ccagcttatc tttcacccat tcgccaagat caacggtttg
     8761 ctggtcatac tccaccaccg ctaccggccg atgaccaaac tccttgtcgg caacgggaac
     8821 gataaacacc tgcaaaaccg caggatgtgc agcaataaca cgctcgactt cttccggctg
     8881 aataccctca ccgccactga ataacagatt gtctaaacgt ccgacaatgg tcagcttgcc
     8941 attatgcatc tcaccgcgat cgcgcgtagc gtaccagcct tcgtcattaa ccagtgaaac
     9001 cagttgcccg ttacgccagt aaccttctgc catactggca gcccgcagcc acacttcatt
     9061 attaacgatt ttcacttccc gacccggcag cggcgaacca acgtctgcca ggccgtcggc
     9121 ttctttcgca cataccgtgg aggcaaactc ggtcagacca tagccgcaaa agcaacgaat
     9181 cccctgctcg cgcgcctgtt ccgtcaactc gaccgggata gccgcgccgc caagtaacac
     9241 cgctttcagg gaaacggaac tgcggttaac cagcaaacgc cagagttgtg ttggcaccag
     9301 tgaagcgtga gtacagcctg ccagcatttg ctccaatggc tgtttatcac gcaccgtcat
     9361 ccgcgcacca gcgtataacc agcgccacat aattccctga ccggagacgt gaaacagcgg
     9421 taaagagagc aaccagtcat cgtgatcgcc aaacggaatc agcgataaca caccttgcgc
     9481 actggcaaga tgggcctgat aagtatggac agcggctttc ggtaaaccgg tggagccgga
     9541 ggtcaatgtc attgaacaaa gacgtgttgg ttgccacaga gctgaatgtg tgccttcaac
     9601 catctgaata tgcagtgaag ttaacgccgg gaaagtattt tctccttcca gcaccagcgc
     9661 atattgcagt gtaagatttg gcagtaattc ctcaagcaac ggttgcggaa gctgtggatt
     9721 tacgggcagc acccgcgccc cgcattgcag taacgccagc caggcgagca gcgtttgcgg
     9781 cgtattccac gcccgcaaca tcacgccgct gccctcaacc acaccctgcg ccgcaaagcc
     9841 cgtagctaac tcatcgacgc gagcacaaag ctcgcgccag ttgagttgct cgtcattaag
     9901 acgtaaggcg atggcttctc cccgcacttg ccgccagtga cgccacggcc agtcagagaa
     9961 gatcataaca accgctccag tgcatcaact tccacgacag gcagcgtgct acccggccag
    10021 cgacgtacct gctgcgcctg catcagatcc agcgtgtcca gccctggaat ggtgtccggc
    10081 gttaaccagg cggcaatccg cgccagttgc gttaagccta agctcgactc aatagaagaa
    10141 ctgatcaccg ccgtcagcct caacgcgtgc gccgcctgta cctgctcgcg tactttttcc
    10201 agactgcccg tgagcgtggg tttgataact accgcgcgca cgccctcttc agccacaaag
    10261 gcaaaatccg gctcgcgcag gctttcatcc caggcaatgg caatgccggt ttcacgggca
    10321 aacgctcgcg aatcatcgcg ggttttgcac ggctcttcga gaaacgcgat gcggtggcga
    10381 taatccgggt taacatattt ggcaaactgc tgacctttca gcggtgtcca ggcgcgattt
    10441 gcgtcaagac gcaaatgcag atccggaatt gcctccagca acagattaac caccatgccg
    10501 tcgcgcacgg cttcgtacaa tcccactttg accttcgcca ctttctcgcc tggcatatca
    10561 gcaagtttga ggatcagatc gtcaggatcg ccattacaca gtggtgccgc acggtaattg
    10621 gccgcctgcg ggagcgtatc tgccagctcc gccaatgcac agcttacgcc aaaggcaatg
    10681 gaaggcatct gcagtagctc gcaatcgcct gccagccagt tatttaccca ggcaagcagc
    10741 acgctttgcg cctcttccca ggtttcctgg ctgaagcccg gcagtgggga gatctccccc
    10801 cacccttcgc gctcgccctc acgcaggcaa acgtacagcc cgtcgcgggt ttttaaccgc
    10861 ctgtcgcgca gaaccacccc cgcgtccatg gggatctgcc agcggtatac ctgcgcgcta
    10921 cgcattacgg attccgttta aatttgctga aatcaggctg acgtttctgg ttgaaagcgt
    10981 tgcgaccttc ctgaccttct tccgtcatgt agaacagcat ggtggcgttg cccgccagct
    11041 cctgcagccc cgcctgcccg tcacagtcgg cgttcagtgc agctttcagg cagcgcagcg
    11101 ccatcggact gttttgcagc atttcgcggc accagcgaac ggtctctttt tccagatccg
    11161 ccagcggtac cacggtgttg acaaggccca tatccagcgc ctgtttcgcg tcgtactgac
    11221 ggcacaggaa ccagatttcc cgcgcttttt tctgtccgac gatgcgagcc atgtaggaag
    11281 cgccccagcc gccgtcgaag gaaccgactt tcgggccagt ctgaccgaag atggcattat
    11341 ctgccgcgat agtcaggtcg cacatcatgt gcagaacgtg accgccgccg atggagtagc
    11401 cagccaccat cgcgacaacc ggtttcggac aggtacggat ctgacgctgg aagtccagca
    11461 cgttcaggtg atgtacgccg gaatcatctt tatagccgcc gtaatcacca cgcactttct
    11521 ggtcaccgcc ggagcagaac gctttatcac ctgcgccagt cagaatgatc acgccgacgt
    11581 tgtcgtcata acgcgcatct gccagtgcct ggatcatctc ttttaccgtc agaggacgga
    11641 aggcattgcg cacctgcgga cgattaatgg tgatttttgc gataccatcg gtggattttt
    11701 cataacgaat gtcctcgaaa ccttcggagc agtcgtgcca ttcaaccggt gcgtaaagca
    11761 ttgcttcatc aggataaatc atattgtgtc ctttagtcag aaacgcaaga tctgcgccag
    11821 acttgcgatt acgccagcgg gattttcccg atgcgcgtta tgtccggcgc gaggaatgac
    11881 atggcagtcg gcagccagtt ccgccgccag ggcgcggaat ttgctgtcac gttcaccaca
    11941 taaataataa aacgcaaatg tgcgggcgct aaggttagca cgtaaatcag gctggacggc
    12001 gagagaagtc gcctccagca tggcggcaag ggttgcgcca ttattgttgc tgcgcagcgc
    12061 caccagctcc cggcgttgat cgtcattgag cgaggcaaaa acaggctgtt gataccagtc
    12121 ggcaaatacc gccgttaacg gttctgtgcg aaaacgctgc gcccattggc gatcggaacg
    12181 ctgacgttcc gcacgttgtt cagcattttg cagccccgga tgcccgcctt cgacaataac
    12241 cccacaaagc cccgccagcc cctggcaagc cgccatcatc gccacccgtc cgccaagcga
    12301 gtaccccacc agccagaagt caaggatgtt gtaactaacc aaggttttac gcagtaagtc
    12361 ggtgacatca tcaaatccat cgacgctaat cgccgccgaa ccaccatgac ctgggagatc
    12421 aacatacaac cgtgagtagt cggcaaacgc ctcgcccact tcttgccatt cgtggcaatc
    12481 gccggaaaaa ccgtgcaaaa acaccagcca gggtaaacct ggttttccgt gttttgcctg
    12541 cgcgtgcagg atcataaatg gcttacctgc gccagaagtt gctggagcgt ttgcgcacca
    12601 tcggtgtcgt taaccaccat ttcaatcacc gtggtggttg gcgtgcgcca ggcgtcggca
    12661 aatgccgttt caagttcctg ccagttttgc ggacgatgat atttcagctc gaacatcgcg
    12721 gcggcgtgct caaaatggac gttttgcggc atcagataga aacgctcacg ctcgctttgc
    12781 ggcgttggca acagcgagaa aatttgcccg ccgttgttgt tcaccacaat taataccagc
    12841 ggcgcagaaa cctgacgcaa taacgccagc gcgttgagat cgtaaagtgc ggagagatcg
    12901 cccacaatcg ccagcgtcgg tttgccgctt gcccgctgaa cgcctgcggc ggtcgaaagc
    12961 agtccgtcga taccgctggc ccctcggttg ctgtacaccg ggtaacctgc cggaagttgc
    13021 gaaagcgcat caatcagacg taccaccagg ctgttaccga caaacaattg cccctgttca
    13081 ggcagatagt cgctgatgcg atgcgccagt tgcgcttcgc caaacgcatc gcgacgggca
    13141 ataaccgcct gcattgcctg ttccgccagg cgcgggattt caacgcacca gggctggcgt
    13201 ttttctgccg gatgcagctc cagccagtcg gcaatattgg caattaagcg gcgtccacga
    13261 tggtgcgccg gatcaagccg cccttcgatg tcatccacaa tccagtactc ttcgggttca
    13321 cagcttgcct gccattgcag gagccgtttg cccgtcaggc tgcttcccag ttgcaccaca
    13381 atttgcgcct gctgcagctc gctggtcgct ttggcattgc ctaaccaaag atcggcacac
    13441 ggcagcggct gcccggtttg tgacagcaca tcgccaatca gcggccagcc aagagtttgc
    13501 gcccacaggg caactttttt gccctcttcc gcactcatgc gcccggcaac caccacgccg
    13561 cgcttttgtc gccagaagaa ccagtcgcgc tgtttttcac tttccagact aggcgcttca
    13621 cgcagccacg gtttgtcgtc ctgccaccag tcacccagac gctgttgcca gctaagcccg
    13681 gtatcgtcca tttcgccata cagcggttca gcaaacgggc agttgatatg gactcccccc
    13741 gcatgaagcg taccgagagc gtggtcgatg gtagaaacca gccaacgtgc ggggatatcc
    13801 tgggtcgggc gcggcaatga aatactgtgc gtggggtgag aggcgaacat tcccggctgg
    13861 cgaattgcct gattcgcgcc gcagtcaatt agctccggcg ggcgatcggc ggttaagaga
    13921 atcagttttt ctccggttaa cccggcttca atcagtgccg gatagagatt tgccaccgca
    13981 gtgccggagg tcacaatcac cgccaccggc tgcttgctga ctttcgccag ccccagcgcc
    14041 agatgcccca acccacgctc atcgaaatgg gtgtggtgaa tgaatgcgga attctccgcc
    14101 gccgctaacg ttaacggtgt agaacgcgag cctggggcga tacagatgtg tctgacgccg
    14161 tgacgcgtta atgcttccag aatgaccgcc gcccagcgtc ggttaaatgc gcttactgac
    14221 atgagtttgt ccggtatcaa tattgcggct aagtataagg agctacaaaa atagattatt
    14281 gatatgaatc ggtaatgatg cgactcatta ctattccatt tgtaataaag tacgcaaccc
    14341 tgccgctttg ttgtcgattt cctgccactc ttgctcgggg tcggaaccac ggacaatgcc
    14401 cgcgccagca tataatcgca cgacattgcc gctaattttt gctgagcgca gggaaacgca
    14461 gaattcgctt tgttgtaatg agagatagcc cgcagaaccg gcgtaccatt ctcgggtgaa
    14521 cggttcgtga cgggcgataa actgtcgcgc cagatcgcgc ggtaagccag caactgctgc
    14581 cgttggctgc aactgatgta aacagatcac atcatccgct ttgttgagtg aagtccagat
    14641 acagcggcga agatgctgca ctttacgcag acgcagtacc tgcggcggta aaacatccag
    14701 cgtctgggta tcggcctgta atcgttggca gatatcttcc accaccagca tgttctcgcg
    14761 ctggttttta tcatccgcca tcagccactc ttctaactgc tgcgcctgct tatcatcagg
    14821 atgatttgct actgttcccg ccagcgcttc agtacgcagc gctttgtcac gccgccgcca
    14881 taaccgttcc ggtgaagagc caagaaaagc attttcgcca tcaaaggcca tgtaaaaatg
    14941 gtagcaattc agattcagtc gacgactggc agccatcatc gccgccgcgt tgaccggact
    15001 tgcgaaatgc aggtcagttg cccgagcgag caccactttg tcgagctcac cttcggcgat
    15061 ggttttcgtt gccagttcga ttaattgcgt ccagcccgtt ttgtccggcc agtgttgttc
    15121 tcgcgtggtg gttaaatgta acccaggcaa gggcttgata ctcaccagtg tggcgataaa
    15181 ttcttttgcc tgaatcgcat cgtgctgaag ggagctttcg ctgaatagcg tcagccgcag
    15241 cgtggcttta ccgccacagc gtcgccattc caggcggggt aaaagtaaat tgccctgcga
    15301 cgggtcaaaa gcattcagcc cccaaatgcg taagtcggcg tgttccgggt gctggcgaag
    15361 aaaacgttgt gcctggtcca acgacgtaaa acgggtaatc gcgcccagga cggcagcttc
    15421 ttcatcacca ttacgttgtt gccagtagaa ttgcgggtac gtttgctgac tggccagcca
    15481 gctcaaggca tcaaaagcgt ctttgagagg gaaaggaata tcgataaccc gaatgccggg
    15541 tgtcgccgga atctcttgcg acaaatggcg cagtagattt tccagcgccg tagtaagtga
    15601 ttgcacgcgg acctctccct gttaaaagcc tcacattata cggggtacta caaaaaaaat
    15661 gcagtacccc ggtgtaggga ggttttaacg gcgtgccagc aacagtccta gtaccagccc
    15721 aacggccgcg cccacaccaa ttccttgcca aggtttttcg tggacgtagt catcagcacg
    15781 ataaacagcc tgcttcgccc gatagtaata actgtctgaa acctggctaa cccgtttttt
    15841 cacatcatcc agcgcttttt ctgcacgcgc tttcagctca acatatttct gatcagcggg
    15901 atcgccagag gagcggagca cctcttccag tgtctcacta agcagcgtca ggtcgtcatc
    15961 gatacgtgta tcaccaaact gattagacat tctcgttctc catttgcgta aaacctgtca
    16021 ctaactatag acaagggttg ttgattacgc ctgaattacc tcgcgtgcca tcccaatgtg
    16081 tgggatacca tcttcttcat agacctccgt cacagggata aaaccgaaac tctggtagaa
    16141 gttttgcaga tgcgcctgcg ccccgaggta aacaggctta tcaggccagt gatgcgtgca
    16201 ggtgtcgagg gttttactca tcagttgctg ccccactttt tcgccacgca acgcttcact
    16261 gacaatcacc cgaccaataa cgaccggctc aagatcatca tcacttttca gaatcctcgc
    16321 atatgccacc agttcatcat ttttccaacc gagaatatgg cgattatccc ccgtcaaatc
    16381 atcaccatcg atatcctgat aagggcaatt ctgctcgaca acaaacaccg cgcaacgcag
    16441 ttgtaataag gcataaagct gggaaaccga taattcagag tgatgcagat cttgccattc
    16501 aatcataatg ctctcctttt agatgtatac cttatactag ccggaatatt ttttgaaacg
    16561 tgatgaactc atggaattaa tttttttagg tacttcagcc ggtgtgccaa cccgcacgcg
    16621 caatgtcacg gcaatattgc ttaacctgca acatccgacc cagagcggac tttggttgtt
    16681 tgactgcggt gaaggcaccc agcatcagct actgcatacc gcctttaacc ctggaaaact
    16741 ggacaagatt tttatcagtc accttcatgg cgatcatctt tttggtttac ccggcttgct
    16801 gtgcagtcgt tctatgtcag gcattatcca acccttaacg atttatggtc cgcaaggtat
    16861 ccgtgaattt gtggaaaccg cgctgcggat tagcggctca tggaccgatt atccgctgga
    16921 aattgtcgaa attggcgctg gcgaaattct cgatgatggc ctgcgcaaag taaccgctta
    16981 tccgctggaa cacccactgg aatgttatgg ctatcgtatt gaagaacatg ataaaccggg
    17041 tgcattaaat gcccaggcat taaaagctgc tggcgtgccg cctggcccac tgtttcagga
    17101 attaaaagcg ggcaaaacaa tcacgctgga agatggaagg cagattaacg gcgcagatta
    17161 cttagctgct ccagtgccag gtaaagcgct cgctattttc ggcgataccg gcccctgcga
    17221 tgccgcactt gacctggcta aaggtgtcga tgtcatggtg cacgaagcga cgctggatat
    17281 aaccatggaa gccaaagcca atagtcgcgg ccatagctct acacgccagg ctgcgacact
    17341 agcccgtgag gctggagtcg gtaagctaat cattacccac gtcagctcgc gctatgatga
    17401 caaaggttgt cagcacctgt tacgtgaatg caggtcaatt ttcccggcga ctgaactagc
    17461 gaatgatttc accgtgttta acgtttaact ctgct
//
LOCUS       DAJVUK010000087        17483 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.087, whole genome shotgun sequence.
ACCESSION   DAJVUK010000087 DAJVUK010000000
VERSION     DAJVUK010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17483
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.087"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(34..2631)
                     /gene="topA"
                     /locus_tag="OQQ57_002609"
     CDS             complement(34..2631)
                     /gene="topA"
                     /locus_tag="OQQ57_002609"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HCS1957326.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
     gene            3011..3262
                     /locus_tag="OQQ57_002610"
     CDS             3011..3262
                     /locus_tag="OQQ57_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HCS1957327.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="OQQ57_002611"
     CDS             complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="OQQ57_002611"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HCS1957328.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMGSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKY
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            4567..5325
                     /locus_tag="OQQ57_002612"
     CDS             4567..5325
                     /locus_tag="OQQ57_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HCS1957329.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL
                     LGDICPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            5322..5913
                     /gene="cobO"
                     /locus_tag="OQQ57_002613"
                     /pseudo
     CDS             5322..5913
                     /gene="cobO"
                     /locus_tag="OQQ57_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="OQQ57_002614"
     CDS             complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="OQQ57_002614"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HCS1957330.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNG"
     gene            complement(7036..8931)
                     /locus_tag="OQQ57_002615"
     CDS             complement(7036..8931)
                     /locus_tag="OQQ57_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HCS1957331.1"
                     /translation="MAGKFRCILLLIAGLFVSSLSYAENPEIPSYEEGISLFDVEATL
                     QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEP
                     WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
                     EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL
                     YRWPHALLSNAPAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD
                     VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQYDKNQQILICV
                     NEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSLF
                     YRPDTFLQWGGLAILAIILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR
                     DDDKPCVNRAIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVCLTGYLTGM
                     GYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISAN
                     LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG
                     GGGGGGW"
     gene            complement(8959..9579)
                     /locus_tag="OQQ57_002616"
     CDS             complement(8959..9579)
                     /locus_tag="OQQ57_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HCS1957332.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="OQQ57_002617"
     CDS             complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="OQQ57_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HCS1957333.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLTTLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            10595..10639
                     /gene="trpL"
                     /locus_tag="OQQ57_002618"
     CDS             10595..10639
                     /gene="trpL"
                     /locus_tag="OQQ57_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HCS1957334.1"
                     /translation="MKAIFVLKAWWRTS"
     misc_feature    10616..10709
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00513"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Trp leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00513"
     gene            10731..12293
                     /gene="trpE"
                     /locus_tag="OQQ57_002619"
     CDS             10731..12293
                     /gene="trpE"
                     /locus_tag="OQQ57_002619"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HCS1957335.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRV
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQ
                     LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     gene            12293..13888
                     /gene="trpD"
                     /locus_tag="OQQ57_002620"
     CDS             12293..13888
                     /gene="trpD"
                     /locus_tag="OQQ57_002620"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HCS1957336.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQRKLEPTNTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGICFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            13889..15250
                     /gene="trpCF"
                     /locus_tag="OQQ57_002621"
     CDS             13889..15250
                     /gene="trpCF"
                     /locus_tag="OQQ57_002621"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HCS1957337.1"
                     /translation="MMQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDAL
                     QGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLP
                     IVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMG
                     GLTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGI
                     NTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAG
                     AIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQL
                     HGNEDQLYIDTLREALPTHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDW
                     SLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTL
                     RAY"
     gene            15262..16455
                     /gene="trpB"
                     /locus_tag="OQQ57_002622"
     CDS             15262..16455
                     /gene="trpB"
                     /locus_tag="OQQ57_002622"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HCS1957338.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVCEFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRETPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            16455..17261
                     /gene="trpA"
                     /locus_tag="OQQ57_002623"
     CDS             16455..17261
                     /gene="trpA"
                     /locus_tag="OQQ57_002623"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HCS1957339.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLRDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS"
BASE COUNT         4221 a         4671 c         4346 g         4245 t
ORIGIN      
        1 cctttgttta taaaaacctg acagaattaa aggttatttt tttccttcaa cccatttgcc
       61 atcaacataa aatgctgacc agccagtcgc ctttccgtct ttttccgaag agacatattg
      121 ctgtttggtt ttacggctaa agcgaaccat ggtcttatta ccttccggat cctgctgtgg
      181 cgcatcggcc agataacgca gtttttccgg cagacggtcg cggaagcgat aaagctcttc
      241 caccagtggc gcacgcgttt cacgcgattt cgggaaagtg ttggcagcca ggaaaacacc
      301 cgcagcgccg tcacgcagca cgaaataagc atctgatttt tcgcacggca gctcaggtaa
      361 tggcaccgga tcttctttcg gtggtgccac ttcgccgtta cgtaaaatct tacgtgtgtt
      421 tttacactct tcgttggtgc aggccatgta tttaccgaaa cgccccattt tcaggtgcat
      481 ttcagagcca catttttcac actcaacgat cgggccgtca taacctttaa tgcggaattc
      541 gccctcttcg atctcgtaac cgtcgcaggt tgggttatta ccacagacat gcaacttacg
      601 tttcggatcg atgagatagc tgtccatcgc cgtgccgcat ttcgggcaac gacgttttgc
      661 gcgcagcgcg ttggtttcag cgtcttcgcc ttccagtacg ttcagcactt cgttttccgg
      721 caccaggtta atggtggttt tgcaacgctc tttcggcggc agcgcataac cagaacagcc
      781 aaggaatacc ccggtgctcg ctgtgcgaat ccccattttg cgaccacaag tcgggcagtc
      841 aatgctggtc agaaccatct ggttcgggcg cataccaccc tcttccggat ctttttcagc
      901 tttatctaac tgctgggtga aatccgagaa gaagtgatcc agtacagctt tccactctgc
      961 ttcgtgattt gccacctggt cgaggctgtt ttccatctgt gcggtgaagt cgtagttcat
     1021 taactcgcgg aaattttctt caaggcgatc ggtgacgatt tcgcccattt tttccgcata
     1081 gaaacgacga ttttctactc gcacgtagcc acgatcctga atggtcgaaa tgatcgacgc
     1141 ataggtagac ggacgaccga taccgcgttt ttccagctct ttaaccagcg atgcttcact
     1201 gaaacgggct ggcggcttgg taaagtgctg ggctggtgta agttcaacga gcgtcagagc
     1261 atcgccttta ttaactgctg gtaagatgcg atcttcatcg cctttacgca acgcaggcat
     1321 cacttttgtc cagccatcaa aacgcaaaat acgaccgcgt gctttcaggc ggaaatcgcc
     1381 cgcaccaacg gtcagcgtcg tggagtcata tttcgctggg gtcatctggc aggctacgaa
     1441 ctgacgccag attaactggt acagtttctg cgcatctgct tccatatcct tcagcgattc
     1501 cgccatcaca ttgacgtcag aaggacgaat cgcttcgtgc gcttcctgtg agttttcttt
     1561 gctggcgtac tgattcggac tttccggcag atatttctta ccaaaattat cgctgatata
     1621 accgcgaacc atatttaccg cgtcctgact caggttagtg gagtcggtac gcatgtaagt
     1681 gatatagcct gcttcataca aacgctgcgc catcatcatg gtttttttca cgccaaatcc
     1741 aagacgggtg ctggcagctt gttgcagcgt agaggtaata aaaggagcgc caggtttact
     1801 ggttgtcggt ttgtcttcac gttccagcac gctgtagcgc gctttttcca gcagacttac
     1861 cgcagcctga gtttgttctt tgttgaccgg acggaacggt ttgtcgttct gatgagtcac
     1921 ctgtaacgcc aacgcttcac cagatggcgt ggtcgtgctg gcatcgactt cccagaactc
     1981 ttccggcacg aacgctttaa tttcacgctc acgctcgacc accaggcgaa ccgccaccga
     2041 ctgcacacga ccggcagaca gaccacgagc gatctttttc catagcagcg gcgaaaccat
     2101 ataccccacc acgcggtcca taaagcgacg cgcctgctgg gcattaacac gatcaatatt
     2161 cagctcaccc ggtttgttaa atgcctggcg gatcgcgttt ttagtaattt cgttaaacac
     2221 cactcggcta tagcgcgcat catcaccccc aatcacttcc cgcaggtgcc atgcaatggc
     2281 ttccccttcg cggtcaaggt cggttgcgag atagatgtgg tcggcttttt cagccagttg
     2341 tttcagttca gagacgacct tctctttacc aggcaacact tcatagtgcg cctcccaatt
     2401 gtgccacggg tcaaccccca tacggttgac gagagcgcca cgttcatcct ttttaggctt
     2461 tttagccgtc ttggtggagg tagagtcggc actctttttg gcagctgagc cactggtcgg
     2521 caaatcgcgg atgtgaccga cgctggattt caccacgtag tcactaccca gatacttgtt
     2581 gatcgttttg gcttttgccg gggactcaac gatgacaaga gctttaccca tattcacctt
     2641 acctaatttg attcttccag gaatgcgtcg cacgttgata aaccttccac tggcaacgag
     2701 ttaccgatat ggactcgttc tctgcggata tcaacccctt gtcgtgactc tgttcacgaa
     2761 aattcaggtg actgagttaa caggtcttgg cctacaggcg ctatagcacg acggaatttt
     2821 ggtcgaatgt caagcaaatc tattgccaga ttgacgaaag cgtcacactg tacctgataa
     2881 aatccgatac gcaactttat tagcatgcaa aatccaaagt tgccagtaag gcgctcttgc
     2941 caccagcgtg gtatatttgt ctgcaagcca tgcctggcgt agactaatgt ccttatttaa
     3001 ggagtaaata atgaacaaag agacacaacc catcgaccgc gaaacgctgt tgaaagaggc
     3061 caacaaaatc attcgtgagc atgaggatac gctcgcaggg attgaagcca ccggcgtcac
     3121 gcagcgtaat ggcgtgctgg tatttaccgg cgactacttt ttagatgaac aaggattgcc
     3181 aacagccaaa agcaccgcgg tgtttaatat gttcaaacac ctggcccatg tgctttcaga
     3241 aaaatatcat ctggttgatt aaagcaaaac gcgaggtctt agcctcgcgt ttgtctttta
     3301 catcaatggc ttttgacccc gctgccacca gcgtagcaac aatcgatcgg cgctctctgc
     3361 cgcgctgccg gtgaatcggt caatgagtcg tttacgctgc atatagcgta cattaaccac
     3421 ttcacggcct tccatcaggc taagaataac ttcatcactg gtgttgattt catcaaccag
     3481 gcctttctct accgcctgtt gtccgtacca gtgttcacct gttgccacct gttcaatatc
     3541 cagagacgga cgcatacgct tcacaaaatc tttaaacaac tgatgcgttt cgttcaactc
     3601 ttcgcggaat ttctcccgcc cttcttcggt attttcaccc agcaacgtca gagtacgctt
     3661 atactgcccg gcagtgtgca gttcgatatc aatatatttg cttttcagga agcggttaaa
     3721 gttgggcatt tgcgccacca ccccaatgga acccacaata gcaaacggtg cggaaacaat
     3781 tttgtccgcc acacaggcca tcatgtaacc gccgctggca gcgactttgt ctaccgtaac
     3841 agttaaagga atgtttttat cacgcagacg ctgcagctgc gaagccgcca acccgtaacc
     3901 atgcaccatg ccaccagggc tttccagacg gagcacaacc tgatcctgcg gtttgaatgc
     3961 tgcgagtacc gccgttatct cttcacgtag cgagttcact tcatgggcgt ccatgctgcc
     4021 tttaaaatcc agcacccaga cgcgaggttt actgtcagtt gccacctcgc ccagtttggc
     4081 tttcgctttt gctgctttcg cttcttgctt gtgctttttc ttctgcgctt tgtgccactg
     4141 tttttgctga tgtgagccca tcagcgccgc ggccagttct tctttcatct ccttatactg
     4201 ttcgctgaga ttgttgaccc gtaactcgcc acgctggcgt ttattacgtt gagcaacatt
     4261 gacaataatg gcggcaatcg ccgcaatcgc tagcacaacg gtaacgattt tcgccaaaaa
     4321 caaaccatat tcagacaaca attccacgag tccccacctt ggttaaacaa cgctttggct
     4381 cacagtttac aacaggcatg ttaagccgtc tcgcagagat gttattgcag cgaaagtatg
     4441 acaaagtatc cattttgcgg tgttatcgcc ccaggctgat tgaaatgccc ttctgtttca
     4501 ggcataaagc cccaaagtca taaagtacac tggcagcgcg acagacaacg tcgttgagga
     4561 gtagccatgc attaccagcc aaaacaagat ttactcaatg atcgcattat cctggtgacg
     4621 ggagccagcg atgggattgg tcgtgaagcc gcgatgacgt atgcacgcta tggtgcgaca
     4681 gtgattctgt tgggccgtaa tgaagaaaaa ttacgtcagg tagccagcca cataaacgaa
     4741 gaaactgggc gtcagccaca gtggtttatt ctcgatttgc tgacctgcac gtccgaaaat
     4801 tgccaacaac tggcacagcg cattgtcgtt aattatccgc gtctggatgg tgttttgcat
     4861 aatgccggat tgctcggcga tatttgccca atgagcgaac aaaatccgca ggtctggcag
     4921 gacgtcatgc aggtcaacgt taatgccacc tttatgctca cccaggcact gcttccttta
     4981 ttactcaaat cggacgccgg ttcactggtc tttacttcat caagcgttgg acgtcaggga
     5041 cgagctaact ggggtgcata tgcagcgtcg aaatttgcca ccgaagggat gatgcaggta
     5101 ctggccgatg aatatcagca gcgcctgcgc gtcaactgca ttaacccagg cggtacgcgc
     5161 accgcaatgc gcgcaagcgc cttcccgacc gaagatccac agaaacttaa aacacccgct
     5221 gatatcatgc cgctctacct ctggctgatg ggcgatgaca gccgccgtaa aaccggcatg
     5281 acctttgacg cccaaccggg ccgtaaacca ggaatttccc aatgagtgat gaacgctacc
     5341 aacagcgtca gcagcgagtg aaagaaaaag tagatgctcg tgtggcacag gccccaggat
     5401 gaacgcggta ttatcatcgt ctttaccggc aatggaaaag gcaaaaccac cgcggcattt
     5461 ggtacggcaa cacgcgcagt tggtcacgga aaaaaagtgg gcgtcgtgca gtttattaaa
     5521 ggcacctggc ctaatggcga acgcaatctg ctggaaccac atggcgttga gtttcaggtg
     5581 atggcaacgg gctttacctg ggatacacaa aaccgcgagt ctgataccgc cgcctgccgc
     5641 gaagtctggc aacatgcaaa gcggatgctt gctgattcct cactggatat ggttttgctt
     5701 gatgaactga cgtatatggt ggcgtatgac tatttgccac tggaagaagt ggtgcaggcg
     5761 ttaaatgaac gtccacatca acagacggtg attatcacgg gtcgaggctg tcatcgggat
     5821 attcttgaac tggcggatac ggtaagtgag ctgcgcccca tcaaacatgc gtttgatgcc
     5881 ggtgttaagg cgcaaatagg gattgattat taatctgtaa aaatgccgga tatgacgtcc
     5941 ggcatacttt gattaaccgt tattacgccc gccagaacga cgaccgccgc tcacctgact
     6001 gtgacgtttc accgcacgac gaatctgatt agccttcatg cgacgacggt ctttttctac
     6061 agcgacttta gagctggttt ctggcggaag ctccaccagt tcgcgcagat agttagtctg
     6121 ggcgaggtcc agctccgtcc agccaccgcg tggcagacct tttggcagtg ggatatcacc
     6181 gtaacgaaca cggatcaggc ggctcacctg cacaccaacc gcttcccaca gacgacgaac
     6241 ttcacggtta cggccttcgg tcagagtcac gttgtaccac tggttgatcc cttcgccgcc
     6301 gctgaacttg atggttttaa aagctgccgg accatcttcc agttgcacgc cacgactcaa
     6361 atcacgcagt ttcgcgtcgt caacctgacc aaatacacgc acggcgtatt cacgttcaac
     6421 ttcacggctt ggatgcatta aacggtttgc cagttcacca tcggtggtga acagcagcag
     6481 accacaggtg ttaacgtcca gacgacctac ggcaatccag cgtgcgccac gcagctttgg
     6541 cagacggtca aacaccgtcg gacgcccttc cggatcgtta cgggtacaca actcaccttc
     6601 cggtttgtaa taggccagaa cgcgacaaat ttgttcagcg gactcacgta ccgaaatcag
     6661 atgaccatcg atacgaattt tcagcccagg ggtaacttca acgcgatcgc cgagtttagc
     6721 aattttgcca tcaacactca cacgaccggc ttcaataata gattcgattt cacggcggga
     6781 gccgtggcca gcgcgggcca gcactttctg taatttttcg ctcatagagc ttccttttgg
     6841 tgtcgccttc ccaggcgtct gatatgcttt tgtgcaacag tgagtcagaa cttacatctg
     6901 actcactgat agtaaagtct gtttgaactc ttcaggcctt aagtaaacga ctcgacgttt
     6961 atcggcctgg ctttgaggcg caacatacta cactatcttt atggttaaag cttgtttcga
     7021 ttaacatcag cttaattacc agccaccacc gcctccgcca cccgcgccgc cgccagcacc
     7081 accaccggaa taacttcgcc ccaacaaact ggtattggcc ccgcaactta ggtgcgtctg
     7141 taatgagaat aaaacgccgt tacgggcaat ctctggagcg cgaatcgccg aagaaagcga
     7201 aggggcaatg cgtaacgccc attccctccc caaatttgcc gatatagccc aacctagcaa
     7261 cgcgtaatcc agtttccgtg tttccccttt ccgccgacgt ccactgtgtg ttgctgcctc
     7321 tttacgcgca agatagttaa cgatagcttc accgcgggca taacgttgct gcccagtttg
     7381 ggtaaacttt ggcagaaaaa tataccccat gccagtgaga taaccggtca ggcaaacagc
     7441 gctaaaataa cccgctggca tataccagta aaagaataca tctccgacat tgatatagag
     7501 agaatagaag gccacgcctg aacaaatcag tggtaaaaac aaagtgatga ttgcacgatt
     7561 aacgcaaggc ttgtcatcat cgcgggcaaa caaaagctca agggaacaaa ataaaaaagg
     7621 aataatccag cagatcataa taaacatatc gcctaccaga ctcattcctg cccaacctac
     7681 gggactcagg ttaccgtaga gaatgatcgc caatattgcc agtccacccc attgcaaaaa
     7741 cgtatcaggc cggtaaaaca aagacttttt acgcggcaga taaaatttct gcatccgtaa
     7801 aaatgccctg cgtaagactc tgttgcgtct ccccgtaaga acgaccttat cgcctttacg
     7861 aaataacgct tccagtaata actgctctgc gggcagtaat acctcattat ttctggtcgc
     7921 gccttcatta acacaaatca ggatttgctg gttcttatca tactgatctt ccagatgaat
     7981 ttttcccttc acgatcagat ttacgatatc ggcacagaaa cctttatcgt cgtaaaccag
     8041 cttcgcatcg agacgtaaca tgccgggcgt gtaatctggc ggaatgacat cggtttcaat
     8101 cacatctacc ggcgtaaatt gcggcctgcg cttccagaga tataaccatc cacaaaccag
     8161 gaatagacac ggaaaccaaa ttaacaacga tgacgtggag ggtaaaagaa gatggctgaa
     8221 aatattcgtc gtttgtggag ccggggcatt gctaagtaac gcgtgaggcc agcggtagag
     8281 taccgtgaaa tcttcacgat aaaacggatc gcgggattca attcttccgt cctcaaggat
     8341 gcggccattt cgatatgtgt cgccctcttc tccagtaaag agatcgattt cgctaaatgg
     8401 attacccgcg atatcaggga acttgagtga aaatcgggtc ttatagattt caaacggcca
     8461 gtggttacca gtcacgttcc agattaacag atctgaatct ccctcacgca ggaaagcatt
     8521 tttaacctga taatgaattt gataatgata gtcgccttga ggcaagaaac gttgtttatc
     8581 gcccacgaca atactcatta acccgatatg ccagtcaaga tgccagggtt caggaatacc
     8641 atcacgagtg acgccaacaa tatgatagtt cagcagtgca gcgtccccat caggctgcat
     8701 ccagagtcgt ggtaaatcac gataaaatcc gtgcttaatc tgctgatttc gcgcctgaaa
     8761 atgaatattt tctttgatgt cgagcacccc atccggttgc agagtggctt caacatcaaa
     8821 gagcgagatc ccttcttcat aagaagggat ctccgggttt tctgcataac ttagagatga
     8881 tacaaacagc cctgctatca acagcaaaat gcagcgaaac ttccctgcca tagtcttcca
     8941 tccgtggaac gcaatttgtt ataagaaagg cttcacatca cccacgcctt cacgcaccac
     9001 gaccggcgta tcatcggtaa gatcaatgac cgttgtcggt ttctgtccga gatagccgcc
     9061 gtggataatc aaatccacct gtttttccag acggtcttta atttcttctg gatcggattc
     9121 ggtaaattcg ctgcctggca gcattagcga agtggaaagc atcggttcgc ccagtgcttc
     9181 aagcaacgcc tgcgcaatcg ggttagaagg cacacgcata ccgatggttt tgcgtttttc
     9241 ctgcaacaga cggcgtggca cctccttcgt ccccttcagg atgaaggtat agttgcccgg
     9301 cgtgttgttt ttcattaaac gaaacgcaac gttatccacg aatgaatagg tcgaaagttc
     9361 agaaagatcg cgacacatca gggtaaagtt gtgaccgtcc ggcagctggc gaatacgaca
     9421 aatacgctcc atcgcgtttt tatcttcaat tttacagccg agcgcatagc cggaatcagt
     9481 tggataaaca atcaccccgc ctttacgcac gatctccacc gcctggttga tcagacgttg
     9541 ctgcgggtta tcaggatgaa tataaaaaaa ctggctcata attccctctc tgtggtgttc
     9601 tgcggctgtt cccatagctg ccagacgcct tcaacgcctg cgggcagcca gagtttacga
     9661 cccagttcga tccacgggca tggctgatga aaatcagatc cttgtgatgc ccataaatga
     9721 tgctgacgcg caagtgtcgt caactgggtg cgttcattgg gcgattgctg gcactgcgcg
     9781 acttccatcg cgtcgccgtg gtgttcggca aaatgcgcaa ccaatctttt cagccattta
     9841 gcactaagat tgtaccgccc aggatgagct agcaccgcct taccgccaga atgatgaatg
     9901 acatcaatag cttgttctat tgtacaccac tgtggcggaa cgtatccggt tttcccgcgc
     9961 gccagatact ttttaaagac atctgccatt gaactggctt tgccgcactc aacaaggaaa
    10021 cgcgcaaaat gaccgcgcgt cactgcgccg ccctgcgcca gtcgttgtgc gccttccagc
    10081 gccccaggta tttgcgcttt ttcaagtctt tcggcaattt gctgcgcccg ctgattgcgc
    10141 cgttctgtct gctgcgcgag gaactcacac attagcggat gagtaatatc aatattcagc
    10201 ccgacaatat gaatttcatg attttcccag accgtggaaa tttccacgcc gggaataaga
    10261 ttcagcgcca gtcccgaacg tgaaatttcc tctcttgctg gcgcgattgc agctgtggtg
    10321 tcatggtcgg tgatcgccag ggtgccgacg cgcatctcga ctgcacggtg caccaatgct
    10381 tctggcgtca ggcagccatc ggaagctgtg gtatggctgt gcaggtcgta aatcactgcg
    10441 taattcgtgt cgctcaaggc gcactcccgt tctggataat gttttttgcg ccgacatcat
    10501 aacggttctg gcaaatattc tgaaatcagc tgttgacaat taatcatcga actagttaac
    10561 tagtacgcaa gttcacgtaa aaagggtatc gacaatgaaa gcaattttcg tactgaaagc
    10621 ttggtggcgc acttcctgaa acgggcagtg tattcaccat gcgtaaagca atcagatacc
    10681 cagcccgcct aatgagcggg cttttttttg aacaaaatta gagaataaca atgcaaacac
    10741 aaaaaccgac tctcgaactg ctaacctgcg aaggcgctta tcgcgacaac ccgactgcgc
    10801 tttttcacca gttgtgtggg gatcgtccgg caacgctgct gctggaatcc gcagatatcg
    10861 acagcaaaga tgatttaaaa agcctgctac tggtagacag tgcgctgcgc attacagcat
    10921 taggtgacac tgtcacaatt caggcacttt ccggcaacgg cgaagccctg ctgacactac
    10981 tggataacgc cctgcctgcg ggtgtggaaa atgaacaatc accaaactgc cgtgtgctgc
    11041 gcttcccccc tgtcagtcca ctgctggatg aagacgctcg cttatgctcc ctttcggttt
    11101 ttgacgcttt ccgtttattg cagaatctgt tgaatgtacc gaaggaagaa cgagaagcaa
    11161 tgttcttcgg cggcctgttc tcttatgacc ttgtggcggg atttgaagat ttaccgcaac
    11221 tgtcagcgga aaataactgc cctgatttct gtttttatct cgctgaaacg ctgatggtga
    11281 ttgaccatca gaaaaaaaac acccgcattc aggccagcct gtttgctccg aatgaagaag
    11341 aaaaacaacg tctcactgct cgcctgaacg atcttcgcca gcagctgacc gaagccgcgc
    11401 cgccgctgcc ggtggtttcc gtgccgcata tgcgttgtga atgtaaccag agcgatgaag
    11461 agttcggtgg cgtggtgcgt ttgttgcaaa aagcgattcg caccggagaa attttccagg
    11521 tggtgccgtc tcgccgtttc tctctgccct gcccgtcacc gctggcggcc tattacgtgc
    11581 tgaaaaagag taatcccagc ccgtacatgt tttttatgca ggataatgat ttcaccctgt
    11641 ttggcgcgtc gccggaaagt tcgctcaagt atgacgccac cagccgccag attgagatct
    11701 acccgattgc cggaacacgc ccgcgcggtc gtcgcgccga tggttcactg gacagagacc
    11761 tcgacagccg catcgaactg gaaatgcgta ccgatcataa agagctttct gaacatctga
    11821 tgctggtgga tctcgcccgt aatgatctgg cacgcatttg cacccccggc agccgctacg
    11881 tcgccgatct taccaaagtt gaccgttact cttacgtgat gcacctggtc tcccgcgtgg
    11941 tcggtgagct gcgccacgat ctcgacgccc tgcacgctta ccgcgcctgt atgaatatgg
    12001 ggacgttaag cggtgcgccg aaagtacgcg ccatgcagtt aattgccgag gcggaaggtc
    12061 gtcgccgcgg cagctacggc ggcgcggtag gttatttcac cgcgcatggc gatctcgaca
    12121 cctgcattgt gatccgctcg gcgctggtgg aaaacggtat cgccaccgtg caagccggtg
    12181 ctggcatagt ccttgattct gttccgcagt cggaagccga cgaaacccgt aataaagccc
    12241 gcgctgtact gcgcgctatt gccaccgcgc atcatgcaca ggagactttc tgatggctga
    12301 cattctgctg ctcgataata tcgactcttt tacgtacaac ctggcagatc agttgcgcag
    12361 caatgggcat aatgtggtga tttaccgcaa ccatattccg gcgcagacct taattgaacg
    12421 cctggcgacg atgagcaatc cggtgctgat gctttctcct ggccccggtg tgccgagcga
    12481 agccggttgt atgccggaac tcctcacccg cttgcgtggc aagctgccca ttattggcat
    12541 ttgcctcgga catcaggcga ttgtcgaagc ttacgggggc tatgtcggtc aggcgggcga
    12601 aattctccac ggtaaagcct ccagcattga acacgacggt caggcgatgt ttgccggatt
    12661 aacaaacccg ctgccagtgg cgcgttatca ctcgctggtt ggcagtaaca ttccggccgg
    12721 tttaaccatc aacgcccatt ttaatggcat ggtgatggca gtacgtcacg atgcggatcg
    12781 cgtttgtgga ttccagttcc atccggaatc cattcttact acccagggcg ctcgcctgct
    12841 ggaacaaacg ctggcctggg cgcagcggaa actagagcca accaacacgc tgcaaccgat
    12901 tctggaaaaa ctgtatcagg cgcagacgct tagccagcaa gaaagccacc agctgttttc
    12961 agcagtggta cgtggcgaac tgaaaccgga acaactggcg gcggcgctgg tgagcatgaa
    13021 aattcgcggc gagcacccga acgagatcgc cggagcagca accgcgttac tggaaaacgc
    13081 cgcgccgttc ccgcgcccgg attatctgtt tgccgatatc gtcggcaccg gtggtgacgg
    13141 cagtaacagc atcaatattt ccaccgccag tgcgtttgtc gccgcggcct gtgggctgaa
    13201 agtggcgaaa cacggcaacc gtagcgtctc cagtaaatct ggttcgtccg atctgctggc
    13261 ggcgttcggt attaatcttg atatgaatgc cgataaatcg cgccaagcgc tggatgagtt
    13321 aggcatatgt ttcctctttg cgccgaaata tcacaccgga tttcgccatg cgatgccggt
    13381 tcgccagcaa ctgaaaaccc gcactctgtt caacgtgctg ggaccattga ttaacccggc
    13441 gcatccgccg ctggcgttaa ttggtgttta tagtccggaa ctggtgctgc cgattgccga
    13501 aaccttgcgc gtgctggggt atcaacgcgc ggcggtagtg cacagcggcg gtatggatga
    13561 agtttcatta cacgcgccga caatcgttgc cgaactgcat gacggtgaaa ttaagagcta
    13621 tcagctaact gcagaagatt ttggcctgac accctaccac caggagcaac tggcaggcgg
    13681 aacaccggaa gaaaaccgtg acattttaac acgcttgtta caaggtaaag gcgacgccgc
    13741 tcacgaagca gccgtcgcgg cgaatgtcgc catgttaatg cgcctgcatg gccatgaaga
    13801 tctgcaagcc aatgcgcaaa ccgttcttga ggtactgcgc agtggttccg cttacgacag
    13861 agttaccgca ctggcggcac gagggtaaat gatgcaaacc gttttagcga aaatcgtcgc
    13921 agacaaggcg atttgggtag aaacccgcaa acagcagcaa ccgctggcca gttttcagaa
    13981 tgaggttcag ccgagcacgc gacattttta tgatgcgcta cagggtgcac gcacggcgtt
    14041 tattctggag tgcaagaaag cgtcgccgtc aaaaggcgtg atccgtgatg atttcgatcc
    14101 ggcacgcatt gccgccattt ataaacatta cgcttcggca atttcggtgc tgactgatga
    14161 gaaatatttt caggggagct ttgatttcct ccccatcgtc agccaaatcg ccccgcagcc
    14221 gattttatgt aaagacttca ttatcgaccc ttaccagatc tatctggcgc gctattacca
    14281 ggccgatgcc tgcttattaa tgctttcagt actggatgac gaccaatatc gccagcttgc
    14341 agccgtcgct cacagtctgg agatgggggg gctgaccgaa gtcagtaatg aagaggaact
    14401 ggagcgcgcc attgcattag gggcaaaggt cgttggcatc aacaaccgcg atctgcgtga
    14461 tttgtcgatt gatctcaacc gtacccgcga gcttgcgccg aaactggggc acaacgtaac
    14521 ggtaatcagc gaatccggca tcaatactta cgctcaggtg cgcgagttaa gccacttcgc
    14581 taacggtttt ctgattggtt cggcgttgat ggcccatgac gatttgcacg ccgccgtgcg
    14641 ccgggtgttg ctgggtgaga ataaagtatg tggcctgacg cgtgggcaag atgctaaagc
    14701 agcttatgac gcgggcgcga tttacggtgg gttgattttt gtcgcgacat caccgcgttg
    14761 cgtcaacgtt gaacaggcgc aggaagtgat ggctgcggca ccgttgcagt atgttggcgt
    14821 gttccgcaat cacgatattg ccgatgtggt ggacaaagct aaggtgttat cgctggcggc
    14881 agtgcaactg catggtaatg aagatcagct gtatatcgat acgctgcgtg aagctctgcc
    14941 aacacatgtt gccatctgga aagcattaag cgtcggtgaa accctgcccg cccgcgagtt
    15001 tcagcacgtt gataaatatg ttttagacaa cggccagggt ggaagcgggc aacgttttga
    15061 ctggtcacta ttaaatggtc aatcgcttgg caacgttctg ctggcggggg gcttaggcgc
    15121 agataactgc gtggaagcgg cacaaaccgg ctgcgccgga cttgatttta attctgctgt
    15181 agagtcgcaa ccgggcatca aagacgcacg tcttttggcc tcggttttcc agacgctgcg
    15241 cgcatattaa ggaaaggaac aatgacaaca ttacttaacc cctattttgg tgagtttggc
    15301 ggcatgtacg tgccacaaat cctgatgcct gctctgcgcc agctggaaga agcttttgtc
    15361 agcgcgcaaa aagatcctga atttcaggct cagttcaacg acctgctgaa aaactatgcc
    15421 gggcgtccaa ccgcgctgac caaatgccag aacattacgg ctgggacgaa caccacgctg
    15481 tatctgaagc gcgaagattt gctgcacggc ggcgcgcata aaactaacca ggtgctcggt
    15541 caggctttac tggcgaagcg gatgggtaaa accgaaatca tcgccgaaac cggtgccggt
    15601 cagcatggcg tggcgtcggc ccttgccagc gccctgctcg gcctgaaatg ccgtatttat
    15661 atgggtgcca aagacgttga acgccagtcg cctaacgttt ttcgtatgcg cttaatgggt
    15721 gcggaagtga tcccggtaca tagcggttcc gcgacgctga aagatgcctg taacgaggcg
    15781 ctgcgcgact ggtccggcag ttatgaaacc gcgcactata tgctgggcac cgcagctggc
    15841 ccacatcctt atccgaccat tgtgtgtgag tttcagcgga tgattggcga agaaacgaaa
    15901 gcgcagattc tggaaagaga aggtcgcctg ccggatgccg ttatcgcctg tgttggcggc
    15961 ggttcgaatg ccatcggcat gtttgcagat ttcatcaacg aaaccaacgt cggcctgatt
    16021 ggtgtggagc cgggtggtca cggtatcgaa actggcgagc acggcgcacc gctaaaacat
    16081 ggtcgcgtgg gcatttattt cggtatgaaa gcgccgatga tgcaaaccga agacgggcag
    16141 attgaagaat cttactccat ctccgccgga ctggatttcc cgtctgtcgg cccacaacac
    16201 gcgtatctta acagcactgg acgcgctgat tacgtgtcta ttaccgatga tgaagccctt
    16261 gaagccttca aaacgctgtg cctgcacgaa gggattatcc cggcgctgga gtcttcccac
    16321 gccctggccc atgcgctgaa aatgatgcgc gaaaccccgg aaaaagagca gctactggtg
    16381 gttaaccttt ccggtcgcgg cgataaagac atcttcaccg ttcacgatat tttgaaagca
    16441 cgaggggaaa tctgatggaa cgctacgaat ctctgtttgc ccagttgaag gagcgcaaag
    16501 aaggcgcatt cgttcctttc gtcacgctca gggatccggg cattgagcag tcattgaaaa
    16561 ttatcgatac gctaattgaa gccggtgctg acgcgctgga gttaggtatc cccttctccg
    16621 acccactggc ggatggcccg accattcaaa acgccactct gcgcgccttt gcggcaggtg
    16681 tgactccggc acaatgtttt gaaatgctgg cactgattcg ccagaaacac ccgaccattc
    16741 ccattggcct gttgatgtat gccaatctgg tgtttaacaa aggcattgat gagttttatg
    16801 cccagtgcga gaaagtcggc gtcgattcgg tgctggttgc cgatgtgcca gttgaagagt
    16861 ccgcgccctt ccgccaggcc gcgttgcgcc ataatgtcgc acctatcttc atctgcccgc
    16921 caaatgccga tgacgacctg ctgcgccaga tagcctctta cggtcgtggt tacacctatt
    16981 tgctgtcacg agcgggcgtg accggcgcag aaaaccgcgc cgcgttaccc ctcaatcatc
    17041 tggttgcgaa gctgaaagag tacaacgctg cacctccatt gcaggggttt ggtatttccg
    17101 ccccggatca ggtaaaagca gcgattgatg caggagctgc gggcgcgatt tctggttcgg
    17161 ccattgttaa aatcatcgag caacatatta atgagccaga gaaaatgctg gcggcactga
    17221 aagtttttgt acaaccgatg aaagcggcga cgcgcagtta atcccacagc cgccagttcc
    17281 gttggcggca ttttaacttt ctttaatgaa gccggaaaaa tcctaaattc atttaatatt
    17341 tatcttttta ccgcttcgct tacccctgtc gaacgtcaac ttacgtcatt tttccgccca
    17401 acagtaatat aatcaaacaa attaatcccg caacataaca ccagtaaaat caataatttt
    17461 ctctaagtca cttattcctc aga
//
LOCUS       DAJVUK010000088        17364 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.088, whole genome shotgun sequence.
ACCESSION   DAJVUK010000088 DAJVUK010000000
VERSION     DAJVUK010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17364
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.088"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(254..535)
                     /locus_tag="OQQ57_002624"
     CDS             complement(254..535)
                     /locus_tag="OQQ57_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehE family protein"
                     /protein_id="HCS1957340.1"
                     /translation="MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMV
                     NGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD"
     gene            complement(798..1907)
                     /gene="apbC"
                     /locus_tag="OQQ57_002625"
     CDS             complement(798..1907)
                     /gene="apbC"
                     /locus_tag="OQQ57_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HCS1957341.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
     gene            2039..4072
                     /gene="metG"
                     /locus_tag="OQQ57_002626"
     CDS             2039..4072
                     /gene="metG"
                     /locus_tag="OQQ57_002626"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HCS1957342.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            4213..8007
                     /locus_tag="OQQ57_002627"
                     /pseudo
     CDS             4213..8007
                     /locus_tag="OQQ57_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="WGR and DUF4132 domain-containing protein"
     gene            8017..11649
                     /locus_tag="OQQ57_002628"
     CDS             8017..11649
                     /locus_tag="OQQ57_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
                     /protein_id="HCS1957343.1"
                     /translation="MDKELPWLADNAQLELKYKKGKTPLSHRRWPGEPVSVITGSLIQ
                     TLGDELLQKAEKKKNIVWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQ
                     NDSQQLLDEIVQQEGLEYATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETY
                     NEFDLRLRKHLSLAEESCWQRCADKLIAALPGITKVRRPFIALILPEKPEIANELVGL
                     ECPRTHFHSKEWLKVVANDPTAVRKLEHYWSQDIFSDREASYMSHENHFGYAACAALL
                     REQGLAAIPRLAMYAHKEDCGSLLVQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFP
                     HATLAALAELLALKEPPARPGNPIIEDKKLPAQQKARDEYWRTLLQTLMASQPQLAEE
                     VMQWLSTQPQSVLKSYLSAPPKPVIDGTDNSNLPEILVSPPWRSKKKMTAPRLDLAPL
                     ELTPQVYWQPGEQERLAATEPARYFSTESLAQRMEQKSGRVVLQELGFGDDVWLFLNY
                     ILPGKLDAARNSLIVQWHYYQGRVEEILNGWNSPEAQLAEQALRSGHIEALINIWEND
                     NYSRYRPEKSVWNLYLLAQLPREMALTFWLRINEKKHLFAGEDYFLSILGLDALPGLL
                     LAFSHRPKETFPLILNFGATELALPVARVWHRFAGQRNLARQWILQWPEHTATALIPL
                     VFVKPCDNSEAALFALRLLYEQGHSELLQTVANRWDRADMWPALEKILTQNPMEIYPA
                     RIPKAPDFWHPQMWSRPRLITNNQTVTNDALEIIGEMLRFTQGGRFYSGLEQLKTFCQ
                     PQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARDLTTQILAWPQEGKSAR
                     AVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVAENRGLSQEELADRL
                     VPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPRLRADDDQLKAPE
                     ALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFTRLVTQRLIWG
                     VYPANEPRCLLKAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTAEMRSEFAQLF
                     ADYEIMPPFRQLSRRTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWESGYEDAF
                     VYNLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSEALSA
                     PDVIFH"
     gene            11710..12027
                     /locus_tag="OQQ57_002629"
     CDS             11710..12027
                     /locus_tag="OQQ57_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957344.1"
                     /translation="MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLER
                     FRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQ
                     EIE"
     gene            12334..13422
                     /locus_tag="OQQ57_002630"
     CDS             12334..13422
                     /locus_tag="OQQ57_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416623.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HCS1957345.1"
                     /translation="MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAAR
                     AFILGDEAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISG
                     DAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITR
                     TPLEVQDCLLGMLSDRVMTVPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKR
                     RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEK
                     KTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVECIAGTIVKDNEEDRAR
                     LRRYFEQRVATHKEAHWQAYYQARHRLP"
     gene            13433..15712
                     /locus_tag="OQQ57_002631"
     CDS             13433..15712
                     /locus_tag="OQQ57_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957346.1"
                     /translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV
                     DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDL
                     PCWAQSEEEDDSPDTQDESQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFA
                     QLRGDASGDALNRQREAFMARWIGWAMQQNNGDVLVVCGGWHAPALAKMWRECPQKIN
                     KPELPSLADAVTGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQKAGEQLLKT
                     ILTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL
                     PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE
                     LTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAAL
                     IEAACFGATLQEAARNKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLI
                     AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCATIDRTLWLCESNGRPDEK
                     EFHAHLHSWQALCHILRDLHSGVNLPGVSLSAAVALLERRSQAIHAPALDRGAALGAL
                     MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLS
                     EADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH
                     QQLEQQALASLQNWGVFHV"
     gene            15705..16841
                     /locus_tag="OQQ57_002632"
     CDS             15705..16841
                     /locus_tag="OQQ57_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HCS1957347.1"
                     /translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW
                     LYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVV
                     TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFS
                     GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLV
                     LLVDQSGSMVDSVIPSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQ
                     LGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGL
                     AALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS"
     gene            16838..>17364
                     /locus_tag="OQQ57_002633"
     CDS             16838..>17364
                     /locus_tag="OQQ57_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HCS1957348.1"
                     /translation="MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN
                     GALIATFSDGVRTQLANGQALKEAQCSCGASGMCRHRVMLVLSYQRLCATAQPTGKEE
                     EWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSS
                     IRFARCDCIEGTLCE"
BASE COUNT         4393 a         4474 c         4392 g         4105 t
ORIGIN      
        1 gtctgtatct cttggaaaca aatttctcac atcaaaaaag ttgccgcaat gtaaacacat
       61 tgttttattg atttaaaaca aattaaccat tgcaatataa atacaaaaaa tatttaagag
      121 tattaactat ttatcgcatc tatcaattaa tgtagattta tgtaaatggt attgttgata
      181 tcaataaaaa agccgaaatc atttatataa atgatttcgg ctttctaaat gcaattaaaa
      241 tcaggttgcc aaattaatcg tagcgattta acacgattcg acgtttgcta tcgctacctg
      301 caacaaccac ttctgtcgtt acacctttga cgggcgaaga aaacagatga cgggtgtcaa
      361 cattatacgt taactgacca caatgctgtt gaggttgacc attaaccata gccatactgc
      421 atgttggggg actgatcctg ccattaatcg ctaatgtggc agtctctgaa gagaatgcgg
      481 gagaagccaa tccataggca agaaaaataa ttcctgacag ccaatactta ttcattgaac
      541 gttatccctg tagtaaaggt tatgcctgga tagaatgagt gcataacaaa ctatagctgt
      601 acatccacta cacagccacg aaggatgata atgaagcatt gcctgtatga tcaatcgact
      661 ttgtagagtt tcggacgaag gtccgcagaa tattcgcagt attaaataag tgttcattaa
      721 tgcggcaaaa actaatacac cgcatcaatg taacatctct gcggtgtatg aagaataacc
      781 agaatggtta ataggcgtta gaccgcgcgg aaggaaatct cgcctggaat gacttcaccc
      841 tgccagtaga gctgagctgc aacgcggtca gccagctggc ggtagatagc ggtaaattcg
      901 ctctccggac ggctgataac cgttggcgta cctttatcga gatcctcacg taaggagatg
      961 tgtaacggca tctgccccag cagctgtgta tggtattttt cagccagttt ctctgcacca
     1021 ccggtaccga aaatcggttc atggtgacca cagttactgc aaatatgcac actcatgttc
     1081 tcgacaatac cgagcaccgg aacctcgact ttctcgaaca tcacaatgcc ttttttcgca
     1141 tcgatcagcg cgatgtcctg cggggtggtg accacgactg caccggttac tggaatgttt
     1201 tgcgccagcg tcaattgaat gtcaccggtg cctggcggca tatcaagcac cagatagtcg
     1261 agatccggcc acaaggtttc ctgcaacatc tgcattaacg ccttgctcgc catcggtcca
     1321 cgccacacca tcgcattgtc gtcagtgacc agataaccaa ttgaattggt tgccaggcca
     1381 tgagacataa tcggtgccat atgggtaccg tccggcgaag ttggacgctg attttctgcg
     1441 cccaacattg ttgggattga tgggccgtag atatcggcgt ccagaatgcc gactttcgcc
     1501 ccttctgccg ccagcgccag tgccaggttt accgccgtgg acgatttacc cacgccgcct
     1561 ttaccggaac tcaccgcgat aatgttcttc acaccgttaa ttcccggctg attcttcacg
     1621 cgtttcagag tggctatgtt atgcgacagt ttccagtcga tagctttcgc cccggtgatg
     1681 cgcagcagtt cggcgctaca ttgctctttt aactcttcga acgcactatg ccagacaaac
     1741 ggcataacca gttccacatg caacgtgtcg tccatccagg cgacatggtg caacgctttc
     1801 agcgtggtga ggttatgctt cagggttggg tgctgaaaat tggccagtgt cccggcgacc
     1861 attgcgcgca aggcttctgg tgatttggcc tgggattgtt cgttcatccc gactcctttt
     1921 ttgtatagat aaaccatcag ttgatagttt acctgaagaa tatagagaag tacttactta
     1981 acattttccc atttggtact atctaacccc ttttcactat taagaagtaa tgcctactat
     2041 gactcaagtc gcgaagaaaa ttctggtgac gtgcgcactg ccgtacgcta acggctcaat
     2101 ccacctcggc catatgctgg agcacatcca ggctgatgtc tgggtccgtt accagcgaat
     2161 gcgcggccac gaggtcaact tcatctgcgc cgacgatgcc cacggtacac cgatcatgct
     2221 gaaagctcag cagcttggta tcaccccgga gcagatgatt ggcgaaatga gtcaggagca
     2281 tcagactgat ttcgcaggct ttaacatcag ctatgacaac tatcactcga cgcacagcga
     2341 agagaaccgc cagttgtcag aacttatcta ctctcgcctg aaagaaaacg gttttattaa
     2401 aaaccgcacc atctctcagc tgtacgatcc ggaaaaaggc atgttcctgc cggaccgttt
     2461 tgtgaaaggc acctgcccga aatgtaaatc cccggatcaa tacggcgata actgcgaagt
     2521 ctgcggcgcg acctacagcc cgactgaact gatcgagccg aaatcggtgg tttctggcgc
     2581 tacgccggta atgcgtgatt ctgaacactt cttctttgat ctgccctctt tcagcgaaat
     2641 gttgcaggca tggacccgca gcggtgcgtt gcaggagcag gtggcaaata aaatgcagga
     2701 gtggtttgaa tctggcctgc aacagtggga tatctcccgc gacgcccctt acttcggttt
     2761 tgaaattccg aacgcgccgg gcaaatattt ctacgtctgg ctggacgcac cgattggcta
     2821 catgggttct ttcaagaatc tgtgcgacaa gcgcggcgac agcgtaagct tcgatgaata
     2881 ctggaagaaa gactccaccg ccgagctgta ccacttcatc ggtaaagata ttgtttactt
     2941 ccacagcctg ttctggcctg ccatgctgga aggcagcaac ttccgcaagc cgtccaacct
     3001 gtttgttcat ggctatgtga cggtgaacgg cgcaaagatg tccaagtctc gcggcacctt
     3061 tattaaagcc agcacctggc tgaatcattt tgacgcagac agcctgcgtt actactacac
     3121 tgcgaaactc tcttcgcgca ttgatgatat cgatctcaac ctggaagatt tcgttcagcg
     3181 tgtgaatgcc gatatcgtta acaaagtggt taacctggcc tcccgtaatg cgggctttat
     3241 caacaagcgt tttgacggcg tgctggcaag cgaactggct gacccgcagt tgtacaaaac
     3301 cttcactgat gccgctgaag tgattggtga agcgtgggaa agccgtgaat ttggtaaagc
     3361 cgtgcgcgaa atcatggcgc tggctgatct ggctaaccgc tatgtcgatg aacaggctcc
     3421 gtgggtggtg gcgaaacagg aaggccgcga tgccgacctg caggcaattt gctcaatggg
     3481 catcaacctg ttccgcgtgc tgatgactta cctgaagccg gtactgccga aactgaccga
     3541 gcgtgcagaa gcattcctca atacggaact gacctgggat ggtatccagc aaccgctgct
     3601 gggccacaaa gtgaatccgt tcaaggcgct gtataaccgc atcgatatga ggcaggttga
     3661 agcactggtg gaagcctcta aagaagaagt aaaagccgct gccgcgccgg taactggccc
     3721 gctggcagat gatccgattc aggaaaccat cacctttgac gacttcgcta aagttgacct
     3781 gcgcgtggcg ctgattgaaa acgcagagtt tgttgaaggt tctgacaaac tgctgcgcct
     3841 gacgctggat ctcggcggtg aaaaacgcaa tgtcttctcc ggtattcgtt ctgcttaccc
     3901 ggatccgcag gcactgattg gtcgtcacac cattatggtg gctaacctgg caccacgtaa
     3961 aatgcgcttc ggtatctctg aaggcatggt gatggctgcc ggtcctggcg ggaaagatat
     4021 tttcctgcta agcccggatg ccggtgctaa accgggtcat caggtgaaat aatccccctt
     4081 caaggcgctg catcgacagc gccttttctt tataaattcc taaagttgtt ttcttgcgat
     4141 tttgtctctc tctaacccgc ataaatactg gtagcatctg cattcaactg gataaaatta
     4201 cagggatgca gaatgagaca ctttatctat caggacgaaa aatcacataa attcagggca
     4261 gttgagcaac agggaaacga gttgcatatc agttggggaa aagttggcac caaagggcaa
     4321 agccagataa aaagtttttc agatgctgcg gcagcggcaa aagcggagct taagctgatt
     4381 gcggagaagg tgaagaaggg gtatgtggag caagcgaagg ataattcttt gcaaccttcc
     4441 caaacggtaa cgggctctct caaggtagcg gacttatcca ccattattca ggaacaaccc
     4501 tctttcgtag cagaaacccg tgcgcctgac aaaaatacag atgctgtttt accgtggctg
     4561 gcgaaagata ttgctgtcgt ttttccgccc gaagttgtac acaccacgtt aagtcatcgc
     4621 cgctttcccg gagttcctgt tcagcaagca gacaaattgc cccaattacg tcgcttagcc
     4681 tgtagtgtgt cgcaacggga taataaaaca gccacatttg acttcagcgc ctgttcttta
     4741 gaatggcaaa acaccgtcgc ccaggcgatc agtcagatcg acggcctgaa aacaacacag
     4801 ttaccatcac cagtaatggc tgtactcacg gcacttgaaa tgaaatgcac aagatataaa
     4861 gtgcgtgagg atgttatgga tcagatcgtc caggaaggcg gtctggaata tgctactgat
     4921 gtaataatac accttcaaca gattgatatt gaatgggatt atgcgaataa tgtcattatt
     4981 attctgccgt ctggcattgc acctagctac ttggagcaat attccagatt tgaatgacgc
     5041 ctacgtaaac atttatcact gacggaagag tctctctggc aaaaatgtgc acaaaaactt
     5101 attgccgcaa ttccacatat tccagaatgg cggcaaccat taattgcttt gttattaccc
     5161 gaaaaaccag aaattgcaca tgaaattgcc cagcgtctac tggggcaaaa aaaattaccc
     5221 tcgcttgagt ggttaaaaat agtggcgact gatgagcaca ttcttgcctc attagaaaaa
     5281 tatcacgaac catatgccat ttttgatgat tactattgtg gtgcgatatg gtcagccacc
     5341 gtattacagg agcaaggtgt tgcagccctg ccccgatttg ctccctatgc cgcaagtgac
     5401 tactgcgccg atgtgttgcg tcatatcaat catccgttcg cattgacact gcttatacgt
     5461 gtagccgggc aaactaaacg ctgtcacgat cggatgacga aagccattgc tgcgttccca
     5521 catgcagcaa tggcggcact gacggaactt cttgggcaaa aagaagagaa cagttggcgc
     5581 attatgctaa tgacaatgct tatctcacaa ccagcactgg cagaacaggt cattccctgg
     5641 ctctcgacac ccgcagttgc cgtactgaaa tcatgccagc aacaactgac acagccctca
     5701 aaccatgcca gcgccgatct actgccagcc gtagtagtct cccctccctg gctttcgaaa
     5761 aagaaaaaat cgccgattcc ggtgctggat ttagcgccat taggcattga gccaatctgt
     5821 tatctgacag aagaaatcag taatcaactt ttggcgaaat atatctggta ttcaaaacac
     5881 atcacggtta gccatgaaga aagtactacc aacctgttgg caaggatggg ttttcaacga
     5941 cggatcgctg gtacatatat taaagctccc gaagcggtag ttgaggcatg gctaaatgaa
     6001 gattattcaa ccttactaag tgaatttaag gtgtttcatt cacctaccgg gcattattgg
     6061 cagttgggga ttttgacaac attgccgctg gagaaagcag taaaagcatg gaatgccctt
     6121 accctatctc cacataccga taccgaatac tccatgttac attttggact caaagggtta
     6181 cctgggttag taaactcact tgcacgctat ccacaagaag ccttgcccat cacgaattac
     6241 ttcgcagcga gtgagctggc tcctgccgtc gcccgtgcct tcaacaaact gaaaacgcta
     6301 cgcgaaaacg cccgtagctg gctgttgaaa tacccggaac atgcccttac cggcctgctg
     6361 cctgcggcgc tcggcaaagc cggtgaagca caggataacg cccgcgctgc cttgcgtatg
     6421 cttaccgaaa acggtcatca gccattactg caagaaatcg cccgacgtta taaccagccg
     6481 gaagtaaccg atgcggtgaa cgctctgctt gcgctcgatc ccttagataa tcacccgaca
     6541 aaaatcccca ctcttccggc cttttatcag ccatcgctct ggacgcgccc ggtattaaaa
     6601 gcaaatgccc aatcactgcc agatagcgcc ctcctccacc tcggtgaaat gctccgcttc
     6661 cctcaggaag aggctctgta tccgggatta ttgcaggtga aagacgtctg ttccgccgac
     6721 tcactggcgg gatttgccta ggatctgttt accgcctggc agaccgctgg cgcgccgtcg
     6781 aaagagagtt gggcgttcac tgcgttaggc gttctcggta acgatgacac cgcccgcaaa
     6841 ctgacgccat taatacgcgc ctggcctggt gaatcccagc ataaacgcgc caccgttggg
     6901 ttggatattc tcgctgctat cggtagtgat atcgccctta tgcagcttaa cggcatcgcc
     6961 cagaaactga aattcaaagc attacaggag cgggcaaaag aaaaaattgc cgacattgcc
     7021 gagagccgcg aactcacggt ggcggagctt gaagatcggt tagcaccgga tctcggtctg
     7081 gatgataacg gttcgctgct gctggatttt ggcccacggc agttcaccgt cagctttgat
     7141 gaaaccttaa aaccgtttgt gcgtgatgtt tccggcagcc gcctgaaaga cctgcccaaa
     7201 ccgaacaaaa gcgatgatga aacgcgggcg aacgatgcgg ttaaccgcta caaattgctg
     7261 aaaaaagatg cgcgtaccat cgccgcccag caggtagcaa ggctggaatc cgccatgtgc
     7321 ctgcgccgcc gctggtcgct ggaaaacttc cagctcttcc tggttgagca tccgctggtt
     7381 cgtcacttaa cccgccgtct gatttggggc gtttatagcg ccgaaaacca gctactggct
     7441 tgctttcgcg tagcagaaga taacagctcc agcaccgctg acgatgatct tttcaccctg
     7501 ccggaaggcg atatctctat cggcactcct cacgttctgg aaatatcacc aacggatgct
     7561 gccgcctttg gtcagctttt tgccgactac gaactgctac caccgttccg ccagctcgac
     7621 cgtaacagct acgccctgac agaagccgag cgcaatgcca gtgaactgac ccgctgggca
     7681 ggcagaaaat gcccgagtgg tcgggtcatg gggctggcga ataaaggctg gataaagggc
     7741 gaaccacagg atggaggctg gatcggatgg atgatcaaac ctttgggtcg ctggtcgtta
     7801 atcatggaaa tcgatgaagg ctttgcggta ggcatgtcgc cagccgaact cagcgctgag
     7861 cagctcttaa gcaagctgtg gctatgggaa ggcaaagcag aaagatatgg ctgggggagt
     7921 aattcaacac aggaagcgca gttctccgta atcgatgcca tcaccgccag cgagctaatt
     7981 aacgatattg aagccctgtt tgaataagga aagagcatgg acaaggaatt accgtggctg
     8041 gcggataacg cccaactgga actgaaatat aaaaaaggca aaacgccgct cagtcatcgt
     8101 cgctggccgg gcgaaccagt gtccgttatc actggaagtc tcatccagac attgggtgat
     8161 gaattgctac aaaaagctga gaagaaaaaa aacattgtct ggcgttatga gaatttttca
     8221 ctggagtggc agtccgccat cacgcaggcc atcaacttga tcggcgaaca caaaccctca
     8281 atcccggccc ggacaatggc ggcgctagcc tgtatcgcgc aaaatgacag ccaacagttg
     8341 ctcgacgaaa tcgtccaaca agaggggctg gaatatgcga ctgaggtggt gattgcacgc
     8401 cagtttattg cgcggtgtta tgagagtgat cctctggtag tgacattgca gtatcaggac
     8461 gaggattatg gctatggtta tcgctcagaa acctataacg aattcgatct ccgactgcgt
     8521 aagcatctct ctctggcaga ggaaagctgc tggcagcgtt gcgccgacaa actcattgcc
     8581 gcactaccag gaataaccaa agttcgccgc ccttttattg cgctgatcct cccggaaaaa
     8641 ccagaaatag ccaatgagtt ggtaggcctt gaatgcccgc gaactcattt tcattctaag
     8701 gagtggttaa aagttgttgc taatgacccc acagcggtga gaaaactcga acactactgg
     8761 agccaggata tatttagcga tcgagaagcc agctacatgt cgcatgaaaa ccacttcggc
     8821 tacgcggcct gcgccgccct tttgcgcgaa caaggactgg cagccattcc gcgcctcgcg
     8881 atgtatgccc ataaagaaga ttgcggcagt ctgctggtac aaattaacca tccgcaagtc
     8941 atccgcacct tgctactggt ggctgataaa aacaaaccca gcctgcaacg tgtagctaaa
     9001 taccataaaa acttccccca tgcgacgctc gccgcactgg cagaactgct ggcgttaaaa
     9061 gaaccaccag cccgcccagg taatccaatc atcgaagaca aaaagctgcc tgcacagcaa
     9121 aaagcacgcg atgaatactg gcgtacgctg ttacaaacgc tgatggcatc gcagccacaa
     9181 ctggcagaag aggtgatgca gtggttaagt actcaacccc agtcagtgct gaagagttat
     9241 ttatcggcac cgcccaaacc ggttattgat ggcaccgata acagcaatct gccagaaatc
     9301 ctcgtttcac caccgtggcg tagtaagaaa aaaatgacag ctccacgtct tgatttggca
     9361 ccgctcgaat taactccgca agtttactgg caaccaggcg aacaagagag gcttgccgcc
     9421 actgagcctg cccgttattt cagcacggaa tctcttgcgc aacgcatgga acaaaaaagt
     9481 ggacgagttg tattacagga actgggtttt ggggatgatg tatggctgtt tctgaattat
     9541 atactccccg gaaaactgga tgctgcacgc aattcactca ttgttcagtg gcattactac
     9601 caggggcggg ttgaagagat cctgaatggc tggaactccc cggaagcaca attagcagaa
     9661 caggcgctcc gcagcggtca catagaagcg ttaattaaca tatgggaaaa tgacaactac
     9721 tcacgttatc gtccggaaaa gagtgtctgg aacctgtatt tattggcaca gttgccgcgt
     9781 gagatggctt tgaccttctg gctgcgtatc aatgagaaaa agcatctgtt cgcgggtgag
     9841 gactattttc tcagtatcct cggattggat gcgctaccag gtctgctgtt ggctttttca
     9901 catcgtccaa aagaaacatt tccgttaatt ttaaatttcg gcgcaacaga actggccctg
     9961 cccgttgccc gcgtctggca ccgttttgcg ggccagcgta atctggctcg ccagtggatt
    10021 ttacaatggc cggaacatac ggctactgca cttattccac tcgtctttgt taaaccctgc
    10081 gacaacagcg aagcggcatt atttgccctt cgtttactgt atgaacaagg acatagtgaa
    10141 ttactgcaaa cggttgcaaa ccgctgggat cgcgctgata tgtggccagc cctggaaaaa
    10201 atacttaccc agaacccgat ggaaatttac ccggcacgca ttccaaaagc ccctgatttc
    10261 tggcatccgc aaatgtggtc caggccgcgc cttatcacta ataatcaaac tgttaccaat
    10321 gacgctctgg aaattatcgg cgaaatgctg cgctttaccc aggggggacg tttttatagc
    10381 gggctggaac aactgaaaac gttctgccag ccacaaacgc tggcagcttt tgcttgggat
    10441 ctcttcactg cgtggcaaca agctggtgcc cccgcaaaag acaactgggc atttctggcg
    10501 ttaagtctct ttggtgacga aagcacggca cgggatctga cgacacagat cctcgcctgg
    10561 ccacaagaag gcaaatctgc ccgtgctgtc agcggcctga acatccttac cctgatgaat
    10621 aatgatatgg cgctgataca gctgcatcat atatcgcaac gggctaaatc ccgcccctta
    10681 cgtgataacg cggcggaatt tcttcaggtg gtcgcagaaa atcgcgggct aagccaggaa
    10741 gagctagcgg acagattagt cccaaccctg ggccttgatg atccgcaggc gttgagtttt
    10801 gattttggtc cccggcagtt taccgttcgc ttcgatgaaa atctcaaccc ggttatcttt
    10861 gatcagcaaa acgttcgcca gaaaagcgtt ccccgtttgc gcgccgatga cgatcaactg
    10921 aaagcgcccg aggcactggc ccgactaaaa gggctaaaaa aagatgctac tcaggtgagc
    10981 aaaaacctgc tcccgcgtct tgaaacggcc ctacgtacca cccgacgctg gtcgctggca
    11041 gattttcatt ctctgtttgt taatcatccc tttacccgtc tggttaccca gcgattaata
    11101 tggggggttt atccggcaaa tgaaccgcgt tgtttactca aagcctttcg tgtggccgca
    11161 gagggggagt tctgcaatgc gcaagatgag ccaattgacc tgcctgcgga cgctctgatt
    11221 ggcattgccc acccgttaga aatgacagca gaaatgcgca gtgaatttgc acagcttttt
    11281 gccgattacg aaattatgcc gccttttcgc cagttgtcgc gccgcacggt gctgctcaca
    11341 cctgacgagt caaccagtaa cagcctgact cgctgggaag gtaaatccgc taccgttggg
    11401 caacttatgg gaatgcgata caaaggctgg gagtcaggct atgaggacgc atttgtctat
    11461 aacctgggtg agtaccggct ggtccttaag ttttcacccg gttttaacca ctacaatgtt
    11521 gatagcaaag cgctaatgag cttccgttct cttcgagtgt accgtgacaa taaatccgtc
    11581 acttttgccg aacttgatgt gtttgatttg agtgaggcgt taagcgcacc tgacgtcatt
    11641 ttccattaaa acacagcggg cagtgatgca actgcccgtt atcaacacga cttaccagcg
    11701 gggaaagcga tgatcgtgca aaaagagctg gttgctattt acgattatga ggtccctgta
    11761 cctgaagatc cgttttcctt cagacttgag atccataaat gctctgaatt atttacaggt
    11821 tccgtctatc gactggagcg attccggcta cgtccaacat ttcatcaacg tgatcgagaa
    11881 gatgctgacc cgctaataaa tgatgcgttg atttatataa gagatgagtg tattgatgag
    11941 cggaaattac gaggtgaatc acctgaaact gtaatagcaa tttttaatcg tgaactacag
    12001 aatatattca accaagaaat agaataatat actctaaata attcaaattg gtccgatccg
    12061 gcgcaacgtc ccaatggcct ggattataaa tctcattatc ttaattgcaa cggggtccag
    12121 ccgtggttat aattcgttcg ttggaacacg atgttgcaca ggctgtggtg ttaggcctga
    12181 aaatagtaaa taaaagaacc tgcctcacca gcaggttttt ttatttactg tgatctgctt
    12241 tccagatatt tttcgctcaa acaactaatg cgccaaacat ttattgcgcg taaaatatcg
    12301 tttatttcat taatacattt cagggatgaa tatatgtcac cgcagaataa tcatctgcag
    12361 cgtccgcctg ctgctgtgtt atacgccgat gaactggcaa aattaaaaca aaatgataac
    12421 gcaccttgcc cgcccggttg gcagttaagt ttgcctgcgg cccgtgcttt tatccttggc
    12481 gacgaagcgc aaaatatcag ccgtaaagtg gtgattagcc cctccgctgt cgaacgtatg
    12541 ttagtcactc ttgctaccgg ccgcggtttg atgttggtgg gggaaccggg taccgcaaaa
    12601 tctcttcttt ctgaattact ggcaaccgct attagcggcg atgccgggtt aaccatccag
    12661 ggcggggcat ctaccaccga agatcaaatc aagtatggct ggaactacgc cctgcttatc
    12721 aatcatggtc cgtcaacgga agcgctggtc cctgccccgc tttatcaggg aatgcgcgac
    12781 ggcaaaatcg tccgtttcga agagataacg cgtacaccgc tggaagtgca ggactgtctg
    12841 ttaggtatgc tttctgacag ggtgatgacg gtgccggaac tcactggtga agccagtcag
    12901 ctctatgcgc gagaaggctt taatattatt gccactgcca atacccgcga tcgcggcgtc
    12961 aatgaaatga gtgctgcgct aaagcgtcgc ttcgattttg aaacggtttt tccgattatg
    13021 gatttcgccc aggagttgga actggtcgcc agtgcttcgg cgcgtttgct ggcccatagc
    13081 ggtattccgc ataaagtgcc tgacgcggta ctggaattac tggtccgcac cttccgcgat
    13141 ctgcgtgcca acggcgaaaa gaaaacgtca atggatacac tgacagcgat tatgtccacc
    13201 gctgaagccg tgaacgtggc ccatgctgtg ggcgtccgcg cctggttttt agcgaatcgc
    13261 gcgggggagc ctgccgacct ggtggaatgt attgccggaa ccatcgtcaa agataacgaa
    13321 gaagatcgcg cgcgtctgcg ccgttacttc gaacagcgtg tcgccacaca taaagaagct
    13381 cactggcagg cttattatca agcccgccac cgcctgccgt gaggaaagat gcatgagcga
    13441 gccgttaatt gtcggcatcc ggcatcatag tccggcctgc gcccggctgg tgaaatcgtt
    13501 aatcgaaagc cagcggccac gatacgtgtt gattgaaggc ccggctgatt ttaatgaccg
    13561 ggtagacgaa ctgtttttag cccaccagct tccggtagct atttacagtt attgccagta
    13621 tcaggacggt gcagcccccg ggcgtggtgc ctggacgcca tttgctgaat tttcgccgga
    13681 gtggcaggcg ctacaagccg cacgtcgcat tcaggcacaa acttacttca tcgatttgcc
    13741 ttgctgggcg cagagtgaag aagaggacga ttcgcctgat acgcaagatg aaagccaggc
    13801 cttactgctg cgtgccaccc gcatggataa cagcgatacc ctgtgggatc acttgttcga
    13861 agatgaaagc cagcaaactg cattaccctc tgcgctggcg cactattttg cccaactgcg
    13921 gggcgacgcc tccggcgatg cgctcaatcg tcagcgcgaa gcctttatgg cccgctggat
    13981 tggatgggcg atgcagcaaa ataatggcga cgtgttagtt gtctgcggtg gctggcacgc
    14041 tccggcactg gcaaagatgt ggcgcgaatg ccctcagaaa attaacaagc cagaattgcc
    14101 ctcgctggca gatgccgtta caggttgtta tctcacaccc tacagtgaaa agcgccttga
    14161 tgtgctggca ggataccttt caggaatgcc tgccccggta tggcaaaact ggtgctggca
    14221 gtggggcttg cagaaggccg gtgaacaact gctaaaaact atccttaccc gtttgcgcca
    14281 gcacaaattg cccgcttcta ccgcggatat ggctgccgct catctgcatg cgatggcgct
    14341 ggcacagttg cgcggtcata cactaccgtt acgcactgac tggctggatg ccatagcagg
    14401 ctcgctgatt aaagaagccc tgaacgcgcc gttgccgtgg agctatcgcg gcgttattca
    14461 tcccgatacc gatccgattc tgctaacgtt gatagacaca ttagcgggtg acggattcgg
    14521 taaacttgcc ccttctacgc cacaaccgcc tctgccaaaa gatgtcacct gcgaactgga
    14581 acgtaccgca atctcccttc cggcggagct taccttaaat cgctttaccc ccgatgggct
    14641 ggcgcaaagt caggtgttac atcggctggc aatactggag atccctggga ttgtacgcca
    14701 gcagggaagt acactgacac ttgcaggcaa cggtgaagaa cgctggaaat taacccgccc
    14761 gcttagccag catgcggcat tgattgaggc cgcctgtttt ggtgccacac tccaggaagc
    14821 cgcacgcaat aaattagaag ccgatatgct ggacgcgggc ggaatcggca gtatcaccac
    14881 atgtcttagc caggcggcgt tagcgggtct ggcgtccttc agtcaacaat tactggagca
    14941 actcacacta ttaatcgccc aggaaaatca atttgccgaa atgggccagg cgctggaagt
    15001 gctttatgcc ttatggcggc tggatgaaat tagcggtatg caaggcgcgc agatattaca
    15061 aacgacgtta tgcgcgacta tcgatcgcac gctgtggctg tgtgaatcta acggcagacc
    15121 ggatgaaaag gagtttcacg ctcacctgca tagctggcaa gcgctttgcc atattctgcg
    15181 cgatctacat agcggcgtta atttacccgg cgtttctctt tctgcggcgg tagccttact
    15241 ggagcgacgc agtcaggcaa ttcatgcccc ggcgctggat cgcggcgcgg ctcttggcgc
    15301 actaatgcgt ctggaacatc ccaacgccag tgccgaagcg gcgctgacga tgctggcgca
    15361 gttatccccg gcacaatctg gtgaggcgct gcacggtttg ctggcgctgg cccgccatca
    15421 actggcctgt cagccggcat ttatcgccgg tttcagcagt catttaaatc aactgagtga
    15481 agccgatttt attaacgccc tgcccgattt acgcgcggcg atggcctggc taccaccacg
    15541 agaacgcggg acgctggcgc atcaggtgct tgagcattat caactggcgc aacttcccgt
    15601 ttcggcgctg caaatgccgt tgcattgtcc accacaggcc attgcacatc atcaacaact
    15661 cgaacagcag gcactggcat cgctgcaaaa ctggggagtt ttccatgtct gaactgaacg
    15721 atcttctgac cacccgtgag ctacaacgct ggcgattaat tcttggcgaa gcggcagaaa
    15781 cgacgctttg tgggctggat gacaacgccc ggcagataga ccacgcgctg gagtggctgt
    15841 atgggcgcga tcctgaacgg ctccagcgtg gtgaacgttc cggtggatta ggtggctcaa
    15901 atctcaccac ccctgagtgg atcaacagta ttcacacgct gtttccgcag caggtgattg
    15961 agcggctgga aagcgatgcc gtgctgcgct acggcattga agatgtggtg acgaatctcg
    16021 acgtgctgga acgtatgcag ccttctgaaa gcctgctacg cgctgttttg cacaccaaac
    16081 atctgatgaa ccccgaagta ctggctgccg cccgccggat agtgtgccag gttgttgaag
    16141 aaattatggc tcgactggca aaggaagttc gtcaggcttt ttctggtgtc cgcgatcgcc
    16201 gtcgccgttc atttattcca ctggcgcgaa actttgattt caaaagtact ctgcgcgcca
    16261 acctgcaaca ctggcacccg caacacggca agttgtatat cgaatccccc cgctttaaca
    16321 gccgcattaa acgccaaagc gaacaatggc aactggtctt actggttgat caaagcggct
    16381 cgatggtcga ttcggtgatc ccctctgcgg tgatggcggc ctgtttgtgg cagttacccg
    16441 gcattcgtac ccatctggtg gcgtttgaca caagcgtcgt tgatctcacg gcagacgttg
    16501 ccgatccggt agagttatta atgaaagtac agttgggcgg cgggaccaat atcgccagtg
    16561 ccgtggagta tggtcggcaa cttattgaac aaccagcgaa aagcgtcatt atcctcgtga
    16621 gcgattttta cgaagggggt tcatcatcat tactgacgca tcaggtgaaa aagtgtgtcc
    16681 agagcggcat caaagtgctg ggactggcag cgctcgatag cacagcaaca ccttgctatg
    16741 accgcgatac ggcccaggcg ctggttaatg tcggcgcaca aatagccgcc atgacaccgg
    16801 gcgagctggc atcatggctt gcggagaatc ttcagtcatg aattcactac gtccggaatt
    16861 attagaactg acaccgcagg ccctgacggc gttaagcaat gccggttttg ttaagcgcag
    16921 tcttaaggaa ctggaaaatg gcaacgtccc ggagatcagc catgagaacg gcgctttaat
    16981 cgccaccttc agtgacggtg tccgtaccca gctggcgaac ggccaggcac tgaaagaggc
    17041 tcagtgcagc tgcggggcca gcggtatgtg ccgtcatcgc gtgatgctgg tgttaagtta
    17101 tcaacgactt tgtgctaccg cccagcctac gggaaaagaa gaggaatggg atccggcaat
    17161 ctggctggaa gaactggcta cccttcccga tgccacccgc aaacgcgcac aggcgctggt
    17221 cgctaaaggc atcaccattg agttgttctg tgcgccgggt gaaattccct ctgcccgctt
    17281 accgatgagc gatgtgcgtt tttattcccg cagcagtatt cgtttcgccc gttgtgattg
    17341 tattgaaggc acactttgcg aaca
//
LOCUS       DAJVUK010000089        17339 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.089, whole genome shotgun sequence.
ACCESSION   DAJVUK010000089 DAJVUK010000000
VERSION     DAJVUK010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17339
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.089"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            191..2038
                     /gene="ldtD"
                     /locus_tag="OQQ57_002634"
     CDS             191..2038
                     /gene="ldtD"
                     /locus_tag="OQQ57_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCS1957349.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGAGGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
     gene            2219..2767
                     /locus_tag="OQQ57_002635"
     CDS             2219..2767
                     /locus_tag="OQQ57_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HCS1957350.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            2794..3441
                     /gene="gloC"
                     /locus_tag="OQQ57_002636"
     CDS             2794..3441
                     /gene="gloC"
                     /locus_tag="OQQ57_002636"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HCS1957351.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
                     QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(3663..4853)
                     /gene="aspC"
                     /locus_tag="OQQ57_002637"
     CDS             complement(3663..4853)
                     /gene="aspC"
                     /locus_tag="OQQ57_002637"
                     /EC_number="2.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate transaminase"
                     /protein_id="HCS1957352.1"
                     /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARMAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="OQQ57_002638"
     CDS             complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="OQQ57_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HCS1957353.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
     gene            complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="OQQ57_002639"
     CDS             complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="OQQ57_002639"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HCS1957354.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
     gene            complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="OQQ57_002640"
     CDS             complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="OQQ57_002640"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HCS1957355.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYKKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            9765..12377
                     /gene="pepN"
                     /locus_tag="OQQ57_002641"
     CDS             9765..12377
                     /gene="pepN"
                     /locus_tag="OQQ57_002641"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HCS1957356.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPEHFTLKIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVISLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="OQQ57_002642"
                     /pseudo
     CDS             complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="OQQ57_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309043.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonates ABC transporter ATP-binding
                     protein"
     gene            complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="OQQ57_002643"
                     /pseudo
     CDS             complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="OQQ57_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001714028.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
     gene            complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="OQQ57_002644"
                     /pseudo
     CDS             complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="OQQ57_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FMNH2-dependent alkanesulfonate monooxygenase"
     gene            complement(15112..16071)
                     /gene="ssuA"
                     /locus_tag="OQQ57_002645"
     CDS             complement(15112..16071)
                     /gene="ssuA"
                     /locus_tag="OQQ57_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein SsuA"
                     /protein_id="HCS1957357.1"
                     /translation="MRNIIKLALVGLLSVSTIAVAAESSPEALCIGYQKGSIGMVLAK
                     SHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="OQQ57_002646"
     CDS             complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="OQQ57_002646"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HCS1957358.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFVP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
     gene            16995..>17339
                     /locus_tag="OQQ57_002647"
     CDS             16995..>17339
                     /locus_tag="OQQ57_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957359.1"
                     /translation="MKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACT
                     LVAATKDSVVTLPNVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADG
                     VQPTAFANQATTD"
BASE COUNT         4371 a         4437 c         4396 g         4135 t
ORIGIN      
        1 taacggcgcg cttttcttta aacttcttta cattaggtta tgtaaaaacg tatcggcgtt
       61 tatatactga agataagcct gatgagtaac aggcttgctc gtcatacttt cgtgagtatt
      121 ggcgttgtac aggcaagtcg taaaataaca gcctggctat tcagagtatg ataaaaacag
      181 ggggcaaggg atgttgctta atatgatgtg tggtcgtcgg ctgtcggcaa tcagtttgtg
      241 cctggccgta acattcgctc cactgttcaa tgcgcaggcc gatgagcctg aagtaatccc
      301 tggcgacagc ccggtggctg tcagtgaaca gggcgaggca ctgccgcagg cgcaagccac
      361 ggcaataatg gcggggatcc agccattgcc tgaaggtgcg gcagaaaaag cccgcacgca
      421 aatcgaatct caattacccg caggttacaa gccggtttat cttaaccagc ttcaactgtt
      481 gtatgccgca cgcgatatgc aacccatgtg ggaaaaccgt gatgctgtta aagccttcca
      541 gcaacagctg gcagaggtgg cgattgccgg tttccagccg cagtttaata aatgggtaga
      601 gttactgacc gatcctggtg ttaacgggat ggcacgcgac gtagtgctct ctgatgcgat
      661 gatgggctat ctccatttca ttgcaaatat tccggtcaaa ggcactcgct ggctatatag
      721 cagtaaacct tatgcacttg caacgccgcc gctctcggtg attaaccaat ggcagctggc
      781 gctggataaa ggtcaattgc ctacgtttgt tgcaggactg gcaccgcagc atccgcaata
      841 tgcggcgatg catgaatcgt tactggcctt actcagtgac accaaaccgt ggccccaact
      901 gaccggcaaa gcaacgttgc gcccagggca gtggagtaac gacgtaccgg cgttgcgcga
      961 aatattgcaa cgcacaggca tgttggacgg ggggccgaaa attactctac ctggcgatga
     1021 cacgccaact gacgcggtag tcagcccatc cgctgttact gttgaaacag cagaaactaa
     1081 gccgatggac aagcaaacga cgtctcgtag taaacctgcg cctgccgttc gcgccgccta
     1141 cgataatgaa ctggtggaag ccgttaaacg ttttcaggca tggcaaggat tgggggcaga
     1201 tggtgctatt ggcccggcaa cacgtgactg gttaaacgta acgcccgccc agcgtgctgg
     1261 cgtgttggct ctcaacatcc agcgattgcg cttgctgcca acagagcttt ctaccgggat
     1321 catggttaac attccggcct attcgctggt ctactatcag aacggcaatc aggtgctgga
     1381 ttcgcgagtc attgtcggtc gccccgatcg caaaacgccg atgatgagca gtgcccttaa
     1441 caacgtagtg gtaaacccgc cgtggaacgt acctccaact ctggcacgca aagatattct
     1501 gccaaaagtg cgcaacgatc cgggatatct cgaaagccat ggctatacgg tgatgcgtgg
     1561 ctggaacagc agagaagcga ttgacccatg gcaggttgac tggtctacaa tcacggcctc
     1621 gaatttaccg ttccgcttcc agcaggctcc aggcccacgg aactcgctgg ggcgctataa
     1681 attcaatatg ccgagttcag aggccattta tttgcatgac acgccgaacc acaatctgtt
     1741 caagcgtgat acacgcgcat tgagctcagg ctgtgtacga gtgaataaag cttccgatct
     1801 ggcgaatatg ctgttgcagg atgcaggctg gaatgacaaa cgtatttctg atgcgctgaa
     1861 gcagggtgat acacgttacg tcaatattcg gcagtcgatt ccggtgaatc tctactacct
     1921 gacggccttt gttggtgcag gtggtcgtac ccagtatcgt acagatattt acaattatga
     1981 tctgcctgcg cgatccagct cgcaaatcgt atcgaaagcg gaacaattaa tcaggtaaat
     2041 gaagtagttc ggggaaatca gttgtcgtaa taattagcat gattgggggc gattctctgc
     2101 agcccccgtc actgctgggg ttgagtcatc ttgacgtctg ctttacgggc ggttaaggtg
     2161 cctcttgtgc gccagaagtg catataaacg ataacattga cctgtagact tgattatcat
     2221 ggacaaattc gacgctaatc gccgcaaatt gctggcgctt ggtggcgttg cactcggtgc
     2281 cgccatcctg ccgacccctg cgtttgcaac actctctacc ccacgcccgc gcattttgac
     2341 actcaataat cttcataccg gagagtcaat caaagcggag tttttcgatg gcagaggcta
     2401 tattcaggaa gaattggcaa aacttaacca ttttttccgc gattaccgcg cgaacaaaat
     2461 aaagtccatc gacccaggat tattcgacca gttgtatcgc ctgcaagggt tgttaggcac
     2521 gcgcaaaccg gtgcaactca tttccggtta tcgttccatt gataccaaca atgaactacg
     2581 cgcccgcagc cgtggagtag cgaagaaaag ctatcacact aaaggccagg cgatggattt
     2641 ccatattgaa ggtatcgcgt taagcaatat tcgcaaagcc gcgttatcta tgcgcgcagg
     2701 tggtgtagga tattacccac gtagtaactt tgtgcatatt gataccgggc cagcacggca
     2761 ctggtagcaa tcgcttaacg aaacaggggc agtatgaact atcgtattat tccggtcacc
     2821 gcattctccc agaactgttc attaatctgg tgtgaacaaa cccgtctggc cgcactggtc
     2881 gatcctggcg gcgatgcgga aaaaatcaaa caggaagttg atgacagcgg cctgacactg
     2941 atgcagatcc tgctgacgca tggtcatctg gaccacgttg gcgcagcggc ggaactggcg
     3001 caacattacg gcgtgccggt ttttggcccg gaaaaagaag atgagttctg gctgcaaggc
     3061 ttgcctgcgc aaagtcgtat gtttggtctg gaagagtgcc agccgctgac gccagatcgt
     3121 tggctgaacg aaggcgatac catcagcata ggaaatgtga ctttacaggt gttacattgc
     3181 cctgggcata cgccgggtca tgtcgtgttt tttgatgatc gggcaaagct gctgatttct
     3241 ggcgatgtta ttttcaaagg cggagtaggg cgcagtgact tcccgcgtgg cgatcataat
     3301 caactgattt cttcaatcaa agataaattg ctgccactgg gggatgacgt gacatttatt
     3361 ccgggtcacg gaccattatc cacacttggt tatgaacgcc tgcataatcc cttcctgcaa
     3421 gacgaaatgc ccgtctggta aggcacataa aaaagcccgc ttttaatgcg ggcctggatt
     3481 tctggcaaag tgcgctttgt ttatgccgga tgcggcacga gcgccttatc cggcctacaa
     3541 aatcgtgcaa attcaaaata ttgcagggga cgcgtaggcc tgataagcgt agcgcatcag
     3601 gcaatgttgc gtttgtcatc agtctcagcc cgcttttcag cgggcttcat tgtttttaat
     3661 gcttacagca ctgccacaat cgcttcgcac agcggagcca tgttatctgg tgtcatcccg
     3721 gccacattta cgcgaccaga agcaaccgca tatacgccaa actcttcgcg cagacgcagc
     3781 acttgttctt ttgtcaggcc actgaaggag aacatgccgt tctgtttgat gataaagctg
     3841 aagtcgcggt ttgcgccttt ttcctgcagc gtattgacga acaactgacg catacgctga
     3901 atacgctggc gcatatcagt cagctcttgt tcccaaatcg cacgtaacgc atcgttgctc
     3961 aggatggtgg caacaacaga agcgccgtgt gctggtgggt tagagtagtt agcgcgaatc
     4021 gccgctttca tttggctgaa tgcgcgatca acggtttcac tgtcggcagc aaccagagta
     4081 caagcgccaa cacgctcgtt gtacaggcca aagtttttag agtaggaact ggcaacaatc
     4141 agctctttat gcatagccgc gaaagcgcgc agtccttcag catcttcttc cagaccacgg
     4201 gcaaaaccct ggtaagcgaa gtcaaacagc ggtaaccagc ctttctcaac ggagagttgt
     4261 gccagtgtct gccattgttc cagcgtaggg tcgataccgg ttgggttatg gcagcagcca
     4321 tggaacagca ctacgtcgcc agcctgagct tcattcaggc tgttaatcag tgcatcgaag
     4381 tcaagagtgt gattttccgc atcataataa gcgtattcac gaacttccag acctgcagag
     4441 ttaaagacgc tcttatggtt cggccagctt gggttgctca cccacactcg cttaacgctg
     4501 gtattttttg ccaggaaatc ggcagctacg cgtagtgcgc cagtgccccc cggagtctgt
     4561 gccatgcgag cacgtttgtc attgatcagg gcgctacctt taccaaacag cagttcctga
     4621 gtgcagcgac caaattcagg gatgccgtca atgccgaggt aatttttggt ggtttcattt
     4681 tcgagcagat actgttcagc ctttttcacg ctggtcagta ccggggtttt gcccgtctca
     4741 tctttataga caccaatccc gaggttaatt ttgccgggac gttcatcggc acgaaacaga
     4801 tcggccaggc ccagaatcgg gtcggcagga gcggcggtaa tgttctcaaa catgacgagg
     4861 ttccattatg gttacagaag ggaagtccgc tatcagggta acgggagatt tacaaaattc
     4921 caactattac tgatgaaaac gcaggctgtt tttgcaagac gtgagattgc tctggaaggt
     4981 ataaaaaaaa caggaccaaa gtcctgtttt ttcggcattt aacaaagagg tgtgctatta
     5041 gaactggtaa acgataccca cagcaacggt gtcgtctgaa cctacgccca gtttgttatc
     5101 agaatcgatc tggttgatga tgtagtcaac ataggtggac atgtttttgt tgaagtagta
     5161 ggttgcgccc acttcaaagt agttcaccag atcaacatca ccgatacctt ctacgtcttt
     5221 cgctttagat ttggtgtaag cgatggacgg acgcagaccg aaatcgaact ggtattgcgc
     5281 aactaacaga acgtcttgcg ttttgttggc gaagccgctg gtgtttgtaa atttattagt
     5341 gatcggcgta gcgttacggg tttcaccgta gttcgctgcc aggtagatgt tgttcgcgtc
     5401 gtacttcaga ccagtagccc actgttcagc ttttttaccg ttgccaagag gttgagcttc
     5461 ttgcaggttg gtacggtcag ctgcaccata agcaccaacg ataccaaagc cttcgtattc
     5521 gtagctgata gaaccgccaa caccgtcgcc gttagaacgg cgtgcagtgt cacgctcgtt
     5581 tttacccagg tactgaacag cgaagttcag gccatcaacc agaccaaaga agttggagtt
     5641 acgataggta gcaacgccgc caacacgacc aacgaagaag tcatcgctgt atgcagtatc
     5701 accaccaaat tctggcagca tatcggtgta acccagtgca tcataaacca caccgtagtt
     5761 acggccgtaa tcgaaagaac caacgtcagc gtatttaaga cccgcgaatg ccagacgcgt
     5821 tttgttacca gtttgagcgt cagcgccttc agagttgtta ccttggaagt tatattccca
     5881 ctgaccataa ccggtcagat cggaattgat ttgagtttcc cctttaaaac caagacgggc
     5941 ataggtcatg tcgccattgc caccgtaact gttttcaccg ttacccttgg aaaaataatg
     6001 cagaccaaca gctttaccgt acagatctac tttgttgcca tctttgttat agatttctgc
     6061 agcgtttgca gtacctgcta ctaacagagc agggacgatc actgccagaa tattgcgctt
     6121 catcattatt tattaccctc atggtttttt ttatgacacc tgccactgcc gtcaataagt
     6181 tctgtcaata aaaatttacg gaactattga tgagagtttg gtgtctttat gtgtctgcag
     6241 gcatctttcc attcaaacta acgtttcgct accgtgaaag tgctgcaaag ataaagattt
     6301 agtttcaaaa agaaaaaata tgtaaccaaa agtaaaaatt aaggaacttt gtgaacaccg
     6361 tcatatttcc atagaaacgt gatgatattt acagcaattt ttatctattt atatgattta
     6421 cttatattta aattaactaa gcggaaattt tgtttctgat ggaaacttta tcgacctggc
     6481 acaaaatcct ctttcagaca tccagaatgc caaaaaatag tatgaaaatt gtgctatcag
     6541 ctaagaaaaa actaatccgc aataagaata cgggttattt tttgtgcgta aatgttgcaa
     6601 tgtaatattc cgtaacagga tgatcgttat ggcggggttg caaatagatt gcttgactta
     6661 acaaacagat aacttgacag aaaggataaa aaagagccag caggcgctgg ctctttgagg
     6721 aagaaaatca gaagctggcg ttgcgcggag tacgtgggaa cggaatcaca tcacgcacgt
     6781 tttgcacgcc agttacgtaa gcaatcaggc gttcaaaacc aagaccgaaa cctgaatgcg
     6841 gaacagtacc gtagcgacgc agatcgcgat accaccagta atcttcttta ttcaggccca
     6901 tttccagcat acgctcgtcc agaacgtcca gacgttcttc acgctgggag cctccaatga
     6961 tctcaccgat gcccggagcc agaacgtcca tagccgcaac ggttttaccg tcttcgttga
     7021 ggcgcatata gaacgcttta atatctttcg gatagttttt aaccactacc ggtgctttaa
     7081 agtgttcttc cgccagataa cgctcatgct cagaagagag atcgacgccc cagtaaaccg
     7141 ggttttcaaa cttcctgccg cagttttcga gaatggtcac tgcgtcggtg taatccacct
     7201 gcgcgaaatc ggcctcaatg aagcgttcca gacgtgaaac ggcatcttta tctacgcgtt
     7261 cagcgaagaa tttcatgtcg tctgcgcgtt cttcgagaac cgctttgaag acatatttca
     7321 gcatggcttc agccagaccc gcgatatcgt tcaggttagc aaacgccact tccggctcca
     7381 gcatccagaa ttccgccagg tgacggctgg tgttggagtt ttcagcacgg aaagtcgggc
     7441 cgaaggtata aattttggat aatgcgcaag cgtaggtttc gccgttcaac tggccagata
     7501 cggtcaggaa agactcttta ccaaagaagt ctttgtcgaa atccactttg ccctgatcgt
     7561 tacgcggcag gttttccaga tccagcgtag aaacgcggaa catttcgcct gcaccttcgg
     7621 tatcagatgc ggtaatcagt ggcgttgaaa cccagaagaa tccctgctcg ttaaagaagc
     7681 gatgcagcgc ctgcgccagc gtatggcgaa cgcgcgcgac ggcaccaatc aggtttgtgc
     7741 gcggacgcag gtgagcgact tcacgcagat actcaatgct gtggcgtttt gccgccatcg
     7801 ggtaagtgtc tggatcttca acccaaccag caacttcaac tttgctggcc tgaatttcaa
     7861 attgttgccc ctggcccggc gacgccacga ctttacccgt cacaatgacc gagcagccgg
     7921 tggtcagacg caggacgtct tcattgtaat tgggcagaga attattgatg acagcctgta
     7981 caggatcaaa gcaggaaccg tcataaacgg cgaggaagga gatgccagct tttgaatctc
     8041 ggcgggtacg tacccatccg cgtacggtga cttcgctgtc aacggctacg cggccctgga
     8101 gtacgtcggc tacaggcaca acgctcataa tattctctct gttaatagtc ggaaaaaata
     8161 aacacttgtc cacccgtaaa tggggggata cctatgttac ctggcatctg caatcagaca
     8221 agcagaattc gcaaatgcag cgaaagattt cggaattaaa ggtaaaaaaa gggagccgat
     8281 tagctccctg atgatattaa ctggcttttt taatatgcgg aaggtcgaac gctttgcgca
     8341 gcgcccgaac aaacgcttta tcatggcaga tagttttgcc agggctgtca gaaagtttcg
     8401 ccaccggttt accgttacac tctaccaact taatcacaat attcaggggt tttacctggg
     8461 ggatatcgca ggtcaggcga gtcccaatac caaaacttaa ttgcacgcgg gaagagaagt
     8521 ggcggtatag ctcaaccgct ttgcgtaaat ccagattgtc agagaaaacc agcgttttac
     8581 tctgtggatc aattcccagc tttttataat gtgcaatggc tttttcaccc cattcaaccg
     8641 ggtcgccaga gtcatgacgc aggccctgat accgactggc gaactcgaca ccgaaatcac
     8701 gcaggaaagc atccatagtg atgcagtcgg ttaatgcaat gccaagttgg tcgggatatt
     8761 cttccagcca ggcagcaagt gcagctcgct ggctgttggc taggtccggg ctgatttgct
     8821 gatgtgcctg gaaccattcg tgcgcctgtg ttcccatcgg cgtgagggaa agccgacgcg
     8881 ccagatcgta gttgctggtg cccacgaacc aggattcctg ttgcagacgc ttaacgatgg
     8941 tttcttgtac ttcgcgagaa aaacggcgac gggtgccaaa atccatcaga tggaagcgcg
     9001 acatatcaag accggcggtt aacgccgaga agtcgactaa tttgctttcc agcgtgtcga
     9061 gggcttgcgc aacgtcggcc tgcggtgagc gatagcgatg taccatttca ctgataaccg
     9121 ccagcaaagg aacttcccag aggatgactt cacgccacgg accgcttaag cgaatatcca
     9181 gcttgccatt atcgttggac acggtgactt gttccgggtt aaagcggaat tcgcgtaacc
     9241 agttaagata gtcggcctta aagaaaggca gggcagagag ccactgatat tcatcatcct
     9301 gcaggcgcag gtgctgcatc gcctgaatct gttcacgaat agcatcggca taaataccca
     9361 gcagatcgtc acctcggcaa cgaaactccg ccgcgacatg cacatcgtaa tagtgatgaa
     9421 acacggcttg ctgcatatgc aacttataag catctgtatc cagcaacgag tgcagaacag
     9481 gagaagcgaa ttgtgtcata ggtgcgcagt agcatcctcg tacaggagcg tttagtacaa
     9541 taaacatctt caggaactgc tggagtatac cttgtttcgc aatttattga accccgatca
     9601 caccatatgc cacctttctg gtcgatggca ttacgcggtg tatgttataa aaatgtagca
     9661 ataaaggcgt ttgtacctga aaagatgaag attctgcata gcgcgattta cgcaacagga
     9721 atagactgaa caccagactc tataaaagat gctaaaggtt atttatgact caacagccac
     9781 aagccaaata ccgtcacgat tatcgtgcgc cggattacca gattactgat attgacttga
     9841 cctttgacct cgacgcgcaa aagacggtcg ttaccgcggt cagccaggct gtccgtcatg
     9901 gtgcatcaga tgctccgctt cgtctcaacg gcgaagacct caaactggtt tctgttcata
     9961 ttaatgatga gccgtggacc gcctggaaag aagaagaggg cgcactggtc atcagtaatt
    10021 tgccggagca ttttacgctt aagatcgtta atgaaataag cccggcggcg aataccgcgc
    10081 tggaagggct ttatcagtca ggcgatgcgc tttgcaccca gtgtgaagcc gaaggtttcc
    10141 gccatattac gtattatctc gaccgcccgg acgtgctggc gcgttttacc accaaaatta
    10201 ttgccgataa aaccaaatat cccttcctgc tttccaacgg taaccgcgtt gcgcaaggtg
    10261 aactggaaaa cggacgccat tgggtacagt ggcaggaccc gttcccgaaa ccgtgctacc
    10321 tgtttgcgct ggtggcaggc gactttgatg tactgcgcga cacctttacc acgcgttctg
    10381 gtcgcgaagt ggcgctggag ctgtacgtcg atcgcggcaa ccttgatcgc gcgccgtggg
    10441 cgatgacctc gctgaaaaac tcaatgaaat gggatgaaga acgcttcggc ctggagtatg
    10501 acctcgacat ctatatgatc gtcgcggtgg atttcttcaa tatgggcgca atggagaata
    10561 agggtttgaa tatctttaac tccaaatatg tgctggcccg caccgacacc gccactgaca
    10621 aagattacct cgatattgaa cgcgttatcg gccatgaata tttccataac tggaccggta
    10681 accgagtcac ctgccgcgac tggttccagc tcagcctgaa agaaggttta accgtcttcc
    10741 gcgatcagga attcagctct gaccttggtt cccgtgcagt taaccgcatc aataatgtgc
    10801 gcaccatgcg cggattgcag tttgcggaag acgccagccc gatggcgcac ccgatccgcc
    10861 cggacatggt cattgagatg aacaacttct ataccctgac cgtttacgag aagggcgcgg
    10921 aagtgatccg tatgatccac accctgctgg gcgaagaaaa cttccagaaa gggatgcaac
    10981 tctatttcga gcgccatgat ggcagcgcgg caacctgcga cgactttgtg caggcgatgg
    11041 aagatgcgtc gaatgtcgat ctctcccatt tccgccgttg gtacagccag tccggcacgc
    11101 cgattgtgac cgtcaaagac gactacaatc cggaaaccga gcagtacacc ctgaccatca
    11161 gccagcgcac gccagccacg ccggatcagg cagaaaaaca gccgctgcat attccgtttg
    11221 ccatcgaatt gtatgacaac gaaggcaaag tgatctcgtt gcagaaaggc ggtcatccgg
    11281 tgaattccgt gctgaacgtc acccaggcgg aacagacctt tgtttttgat aatgtctact
    11341 tccagccggt gcctgcgctg ctgtgcgaat tctctgcgcc agtgaaactg gaatataagt
    11401 ggagcgatca gcaactgacc ttcctgatgc gtcatgcgcg taatgatttc tcccgctggg
    11461 atgcggcaca aagcctgctg gcaacctaca tcaagctgaa cgtcgcccga catcagcaag
    11521 ggcagccgct gtctctgccg gtacatgtgg ctgacgcttt ccgcgcagtg ctgctcgatg
    11581 agaagattga tccggcgctg gcggcagaaa tcctgacgct gccttctgtc aatgaaatgg
    11641 ctgaactgtt cgatatcatc gacccgattg ctattgccga agtacgcgaa gcactcactc
    11701 gtactctggc gactgaactg gcggatgagc tgctggctat ttacaacgcg aattaccaga
    11761 gcgagtaccg tgttgagcat gaagatattg cgaaacgcac tctgcgtaat gcctgcctgc
    11821 gcttccttgc ttttggtgaa acgcatctgg ctgacgtgct ggtgagcaag cagttccacg
    11881 aagcgaacaa tatgaccgat gcgctggcgg cgctttctgc ggcggttgcc gcacagctgc
    11941 catgccgtga tgcgctgatg caggaatacg acgataagtg gcatcaggac ggtctggtga
    12001 tggataaatg gtttatcctg caagccacca gcccggcggc gaatgtgctg gagacggtgc
    12061 gcggtctgtt gcagcatcgc tcatttacca tgagcaaccc gaaccgtatt cgttcgttga
    12121 ttggcgcgtt tgcgggcagc aatccggcag cgttccatgc cgaagatggg agcggttacc
    12181 agttcctggt ggaaatgctt accgacctca acagccgtaa cccgcaggtg gcttcacgtc
    12241 tgattgaacc gctgattcgc ctgaaacgtt atgatgccaa acgtcaggag aaaatgcgcg
    12301 cggcgctgga acagttgaaa gggctggaaa atctctctgg cgatctgtac gagaagatca
    12361 ccaaagcact ggcttgataa ataaccgaat ggcggcaata gcgccgccat tcggggaatt
    12421 tacccctgtt ttctcaggcg aatttcagat tcaccacgct gcatcaccct ttgcaacact
    12481 tccgattcca gctccgctaa tcgcaccgac cctaatcgac gcggaggggg gatatccact
    12541 gtcaaatcca gaccaatttt tccctcttca attaataaca cccggtcagc cattgctacc
    12601 gcttcgctca catcatgcgt caccaacagt acggtaaagc cgtgctcctg ccaaagtgac
    12661 acaatcaaat cctgcatctc gagtcgcgtt aaggcgtcca gtgccccgag cggttcatca
    12721 agcaacaata aacccggtcg atgaatcaac gctcttgcca gcaccactcg ctgtttctgc
    12781 ccgcctgaaa gtgcggcagg ccattccccg gcgcgattct ccagtcctac cgcagccaac
    12841 gcccgacgcg cggcatcgcg ccactggcct ttaaggccta acccaacgtt atcaatcacc
    12901 gatttccacg gtagcagacg cgcatcctga aacatcattc gcgtgtcttc ctgaatttca
    12961 gccagcggtg tggtgcctgc caacacatcg cctgcggttg gcgtttccag cccggccagc
    13021 aggcgcagca gggtactttt gccaccaccg ccacaaactg acctgccgga atatgtaaat
    13081 ccagttggtt caggacgata ttttccgcgt aatgtttgct tactgcattg agcaacaatg
    13141 gtgtgccctg gttcagacga gcagtattca taccgtggcc tccttcaaat gataagccgg
    13201 gttccagcgc aaccagaggc gctctaacag ctgcgcgctg acgtcagcaa gtttgccgag
    13261 cagggcgtaa agaataatag cgactaccac cacgtccgtt tgcaaaaact ctcgcgcatt
    13321 catcgccaga taaccaatgc cggaattggc agaaatggtt tcggcaacaa tcagcgtcag
    13381 ccacatcagg cccaacgcaa aacgcacgcc gaccataatt gagggcaggg caccaggcag
    13441 gatcacatgg ataaacagcg gtatgccgga taacccatag ctacgcgcca tctccaccag
    13501 cccgcgatcg atattacgga tgccatgcca ggtgttgata taaatgggaa acagcgtacc
    13561 gagcgccacc agaaagattt ttgcggattc atcaatgcca aaccacaaaa tcaccagcgg
    13621 gatcagcgcc agatgcggca cgttgcgcaa catctgaatt gaggtatcca gcagccgttc
    13681 tccccagcga gatagcccgc taataagtcc caaaatcaac cccagcgatc cgccaattga
    13741 aaagccaatc agcgcccgct aggaactgat cgccagatgc tgccacagtt cgccgctggc
    13801 ggagagcgtc cagaacgccg tcaccacccc ttccggtgag ggcaaaatac gcgtcgacag
    13861 ccagccaact gaggaggcca gttgccacac cgccacgatg cccaccggta aaaactaggg
    13921 ggcaacgcgc aataaccact tcttcactgg cgttgccatt atttcttcct tagctttgcg
    13981 cgactttacg ggggataaaa tcattcgcca ccgcttcgcc ttgcggattc agcggctgcg
    14041 gctggggaat ttccggaatg gcgacatcca gatgtgggaa cagcaactcg ccgacccgat
    14101 acgcttcttc cagatgcgga tagcccgaaa gcacaaagct gtcgatgcca agcgcggcgt
    14161 attcgttgat tcgcgcagcg accgtaggac catcgcccac cagcgccgtt ccggcaccgc
    14221 cgcgcactaa gccaacgccc gcccataaat tggggctgat ctccagattg tcgcgcttgc
    14281 cgttatgtaa cgccgccatt cgctgttgtc ctacggaatc cgtccgggcg aatgcggcct
    14341 gtgctttggc gatagtttca tcatcaagat gcgagattaa ccgctcggcg gcctgccacg
    14401 cttcgtcgtt agtttcacga acaatcacat gcagacgaat accgaaacga attttgcgtc
    14461 catgcgcggc agctttcgcc cgcacttgtt cgatcttctc ttttactagt tctggcggtt
    14521 cgccccaggt gaggtagaga tcaacttgtt ctgccgccag ctcctgggcg acgtctgacg
    14581 atccgccaaa gtaaagcgga ggataaggct gttgaatcgg cgggaagagc agttttgctc
    14641 cgcgcacatg aatatgttta ccgttgaaat tgacggtttc ccccagcaat aagcgccgcc
    14701 agacctaggt aaattccgcc gaggcttcgt agcgctcgct atgatcaagg aacacgccgt
    14761 cgcctgccag ctcttgtgga tcgctgcctg tgaccagatt aaacaacgca cgaccatttg
    14821 agagacggtc aagcgtggcg gcctggcgag cggcaacggt aggtgaggtt acgctggggc
    14881 gcagggcgac aagaaacttc agccgctgcg tcaccgggat catcgacgcc gccaccagcc
    14941 acgcatcttc acacgatcgc cccgttggga tcagcacacc ggtatagccc agacgatccg
    15001 ccgcttgcgc aatttgttgc agataaccgt gatcaaccgg gcgtgaacct tcttccgttc
    15061 ccagatagtg cccgtcaccg tgggtcggta aaaaccagaa catattcaga ctcataattg
    15121 ttttccttcc agttgagtgg gctgccagat gcgctggcga atatcgactt ttttcggcac
    15181 cagacgattt tcataaaaca gatctgccgt ttgctgctgt aaggcggcaa cctcggcgtt
    15241 aaccggtttg atggtggtag gagggcgatg atctaagtaa gaggcaatca ccggtgccgg
    15301 taagcccatc gtttttgcca gtaaagcgat gctttgctcg cgctggctgc gggttaacgc
    15361 atcggcctca ctaaaggttg ccagtacgcc ctgaataaaa gcgccgtttt tttctgcata
    15421 gggacgagct gccagataaa acgatccagt ttgattgaga tcggtgccgt ctttcagcac
    15481 ccgcacgccg ccctgtaata atgcagcaga gtagtaggga tcccagatag cccaggcgtc
    15541 aacgttacct tgctggaacg cggcgcgggc atcagcgggc gtcaggtaag tgggttggat
    15601 atcggtaaac ttaagtccgg cctgacgcag tgcacgcagt aaaaggttgt gtgaactgga
    15661 acctttctga aaggcaactt tgtgaccttt aagatcggct acggttttga tcgggctgtt
    15721 ttctgccacc agaatcactt cggctttggg cttcggtggc tcgacgccca catataccaa
    15781 atcagccccg gcagcctggg caaagattgg cggaatatcc ccggtactgc cgagatcaat
    15841 actgccaacg tttaaggctt ccaacatttg cggacccgcg gggaactcca cccaggagat
    15901 ttttgattgc ggatagcgtt tttccagtaa ctggtggctt tttgccagta ccataccaat
    15961 actgcctttc tgatagccta tacataacgc ttcaggcgag gattctgcag caaccgcaat
    16021 cgtagagacg ctaagcaatc ccaccagcgc cagtttaatg atgttacgca tgggcattac
    16081 ctcgcagaga cagaaggtca ggaacctgaa catcgcggcg gtgcaatgcc tgccagaaag
    16141 tttctagcgc ggtatcaaga cgggtttgca gatttggcgt gaactggggt ctgtgatggt
    16201 aatcaattac ttgtgagtca tcggcaaaca cgccgtgcag gatctcctga gctttcagtg
    16261 cgcttaaaac tggtttaagg gcataatcga ccgccagcag atgggccacg gtaccgcccg
    16321 tcgccagcgg tagcaccact ttgccttgca aagcgcgctc tggcagcagg tcgagcaggg
    16381 ttttcagcgc gccggaatag gcggctttat acacaggtgt agcgactatc agtccatcag
    16441 cctgttgcag ctgttcggtg aaggtcttga gtgccggact atcgaaacga gcataaagca
    16501 gatcttccgg gacgaagttt tgcagattcc agtgataaac ctctacatcc aggccattta
    16561 gtttttcccg cgcatattcc agcaaggagc tggagcgaga aggaaagcga ggactacccg
    16621 ccagggtgat gacacgcata ctctctcctt ataaccaatt gttctttttt tgttaacatt
    16681 gataacaatt cggtcagtct gtcggagaga caagaaaatg ccaaatataa attttgtgta
    16741 tctttttctg aaaataaact aaagaaaggg ctttatatat cacgcatatt tatttgttgg
    16801 atagtcatta gatgttgaat caatgaatta ctcgttcagt taatatttaa atattcatga
    16861 aatctataaa ttaaagattt gtcacttatt ggatttagta tttttgattt aaatgacggt
    16921 caattattgt tattattaag tctaatgtca tttaaaggca ttatcatatt tacgaagaga
    16981 tcaggatgat gacgatgaaa aaaagtgtat tgacggcgtt tataactgtg gtatgtgcaa
    17041 cgtccagcgt tatggcagct gatgataatg ctatcacgga tggcaaagta acatttaatg
    17101 gtaaagttat tgctccagct tgtaccctgg tagctgcgac gaaagattca gtagtcacat
    17161 tgccaaatgt cagcgccacc aagttgcaaa ctaatggagc agtctctggc gttaaaactg
    17221 atgtaccaat tgccttagaa ggctgtgatg ttactgtaac taaaaatgcg acgtttacct
    17281 ttagtggtac ggctgacggc gtgcaaccta cagcatttgc caaccaggct accaccgat
//
LOCUS       DAJVUK010000090        17104 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.090, whole genome shotgun sequence.
ACCESSION   DAJVUK010000090 DAJVUK010000000
VERSION     DAJVUK010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17104
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.090"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..304)
                     /gene="hlyE"
                     /locus_tag="OQQ57_002648"
     CDS             complement(<1..304)
                     /gene="hlyE"
                     /locus_tag="OQQ57_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin HlyE"
                     /protein_id="HCS1957360.1"
                     /translation="MTEIVADKMVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETI
                     KELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLF"
     gene            677..1096
                     /locus_tag="OQQ57_002649"
     CDS             677..1096
                     /locus_tag="OQQ57_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HCS1957361.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
     gene            1096..2363
                     /gene="umuC"
                     /locus_tag="OQQ57_002650"
                     /pseudo
     CDS             1096..2363
                     /gene="umuC"
                     /locus_tag="OQQ57_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415702.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase V catalytic protein"
     gene            complement(2409..2939)
                     /gene="dsbB"
                     /locus_tag="OQQ57_002651"
     CDS             complement(2409..2939)
                     /gene="dsbB"
                     /locus_tag="OQQ57_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HCS1957362.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     MISQPFKAKKRDLFGR"
     gene            complement(3085..4626)
                     /gene="nhaB"
                     /locus_tag="OQQ57_002652"
     CDS             complement(3085..4626)
                     /gene="nhaB"
                     /locus_tag="OQQ57_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HCS1957363.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4848..5567
                     /gene="fadR"
                     /locus_tag="OQQ57_002653"
     CDS             4848..5567
                     /gene="fadR"
                     /locus_tag="OQQ57_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HCS1957364.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            complement(5619..7151)
                     /locus_tag="OQQ57_002654"
     CDS             complement(5619..7151)
                     /locus_tag="OQQ57_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HCS1957365.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMG
                     NL"
     gene            7481..8779
                     /gene="dadA"
                     /locus_tag="OQQ57_002655"
     CDS             7481..8779
                     /gene="dadA"
                     /locus_tag="OQQ57_002655"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HCS1957366.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
                     GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFDSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            8789..9848
                     /gene="dadX"
                     /locus_tag="OQQ57_002656"
                     /pseudo
     CDS             8789..9848
                     /gene="dadX"
                     /locus_tag="OQQ57_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309712.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
     gene            complement(10235..11971)
                     /locus_tag="OQQ57_002657"
     CDS             complement(10235..11971)
                     /locus_tag="OQQ57_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HCS1957367.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGTAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(12066..12980)
                     /gene="ldcA"
                     /locus_tag="OQQ57_002658"
     CDS             complement(12066..12980)
                     /gene="ldcA"
                     /locus_tag="OQQ57_002658"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HCS1957368.1"
                     /translation="MSLFHLIAPSGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQ
                     GEGPTCQTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVSAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            13080..13691
                     /gene="emtA"
                     /locus_tag="OQQ57_002659"
     CDS             13080..13691
                     /gene="emtA"
                     /locus_tag="OQQ57_002659"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HCS1957369.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(13693..14427)
                     /locus_tag="OQQ57_002660"
     CDS             complement(13693..14427)
                     /locus_tag="OQQ57_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HCS1957370.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEREAREKADKVRD"
     gene            14628..14882
                     /locus_tag="OQQ57_002661"
     CDS             14628..14882
                     /locus_tag="OQQ57_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCS1957371.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFQTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAILVLGLFRLLRRE"
     gene            15061..15501
                     /locus_tag="OQQ57_002662"
     CDS             15061..15501
                     /locus_tag="OQQ57_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957372.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY
                     RQRRCKSPGDDSETLTRRNDAIFGNHVWQTFAQYFPPGLEKPAV"
     gene            complement(15580..17104)
                     /locus_tag="OQQ57_002663"
                     /pseudo
     CDS             complement(15580..17104)
                     /locus_tag="OQQ57_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415715.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
BASE COUNT         4310 a         4225 c         4422 g         4147 t
ORIGIN      
        1 caaatagcaa aatatacgct gcgagcaatt gcgtcgcaac accacaccat tcatacactg
       61 tttgggttgc ttcaaaatac ttatcctggc tatccataag taaggtttta atatcgccga
      121 ctaaaacgga ggctgcctgt gaatactcct gtttaaagcg acttaactct tttatggttt
      181 catcaaaggt ctgccagggg atgacctgat cgagatattt attataaaga tctaatgctc
      241 catctgcggt ttcgattgcg tttttaacta cttctaccat tttatctgca acgatttcag
      301 tcataatcat tcgcctcttt aaatatataa attgtaatga aactcctgtt ttacaactat
      361 taataaattt tacttcatct aattcatagt tagccgggtg ggatgcgtca atgtctttat
      421 ttctattaat atgataaata tcaaacaatg tttaatgtca ttatggcgaa tgcttctatt
      481 ctattttttt gccgggtgat atttttcatt tctgctggat gagcgtcgtc gccagaaggc
      541 cacgtgagca caggataaga gaacgaaaaa tcagcagtct atacagcgac aaatattgat
      601 agcctgaatc agtattgatc tgctggcaag aatagactac tgtatataaa aacagtataa
      661 cttcaggcag attattatgt tgtttatcaa gcctgcggat ctccgcgaaa ttgtgacttt
      721 tccgctattt agcgatcttg ttcagtgtgg ctttccttca ccggcagcag attacgtcga
      781 acagcgcatc gatctgaatc aactgttgat ccagcatccc agcgcgactt acttcgtcaa
      841 agcaagtggt gattctatga ttgatggtgg aattagtgac ggtgatttac tgattgtcga
      901 tagcgctatt accgccagcc atggtgatat tgtcatcgct gctgttgacg gcgagtttac
      961 ggtgaaaaaa ttgcaactac gcccgacggt acagcttatt cccatgaaca gtgcgtactc
     1021 gcccattacc atcagtagcg aagatacgct ggatgtcttt ggtgtggtga tccacgtcgt
     1081 taaggcgatg cgctgatgtt tgctctctgt gatgtaaacg cgttttatgc cagctgtgag
     1141 acggtgtttc gccctgattt atggggtaaa ccggtggttg tactatcgaa taatgacggt
     1201 tgcgttatcg cccgaaacgc tgaggcaaag gcgctgggtg ttaaaatggg cgatccctgg
     1261 ttcaaacaaa aagatctgtt tcgtcgctgt ggtgtggttt gctttagcag caattatgag
     1321 ctttacgcag acatgagcaa tcgggttatg tcgacgctgg aagaactatc gccccgcgtc
     1381 gagatttaca gtattgatga ggcattctgc gatctgacag gtgtgcgtaa ttgtcgcgat
     1441 ctgactgatt ttggcagaga aattcgcgca acggtgctac aacgtaccca tcttactgtt
     1501 ggtgtgggga tcgcccagac caaaacgctg gctaagcttg ccaatcatgc ggcaaaaaaa
     1561 tggcagcggc agacgggggg gtggtggatt tatcaaatct ggaacgccag cgtaaattaa
     1621 tgtctgctct ccccgtggat gacgtctggg ggattggacg gcggatcagc aaaaaactgg
     1681 acgcgatggg gatcaaaacc gttcttgatt tggcggatac agatatccgg tttatccgta
     1741 aacattttaa tgtcgtgctc gaaagaacgg tgcgtgaact gcgcggtgaa ccctgtttgc
     1801 aactggaaga atttgcaccg acaaagcagg aaattatctg ttcccgctcg tttggtgaac
     1861 gtatcacgga ttatacgtcg atgcggcagg ccatttgtag ttacgctgcc cgggcggcgg
     1921 aaaaacttcg cagtgagcat caatattgtc ggtttatctc cacatttatt aagacgtcac
     1981 catttgcgct caatgaacct tattacggca atagcgcgtc ggtaaaactg ctgacgccca
     2041 ctcaggacag cagggatatc attaacgccg ctacgcgatc tctggatgcc atctggcaag
     2101 cgggccatcg ctaccaaaaa gcgggcgtga tgctggggga tttcttcagt cagggagtcg
     2161 cgcagctcaa tttattcgat gacaacgcac cgcgccccgg gagtgagcaa ttgatgacgg
     2221 taatggatac actgaatgct aaagagggca gaggaacact ctattttgcc gggcagggga
     2281 tccaacaaca atggcagatg aagcgagcca tgctttcacc acgttataca acgcgaagtt
     2341 ctgatttact gcgggtcaaa taaatatagc ggcaggaaaa aagtgctccc gcaggagcgc
     2401 cgaatggatt agcgaccgaa cagatcacgt tttttcgctt taaacggctg ggaaatcatc
     2461 accagcaccg cgacaatcag gtaagcgata aaaataccga gcagccactg cggcatttcc
     2521 agacctaaaa aatcccactg acgctcggcg caatcgccag aggcgacaaa cacttgcggc
     2581 acccatttat ccagcggcag ccattccggg aaacgaacca taaaatcaca ggtggcaaac
     2641 ggcgaaggat agagctgaag catggtgtgc tcgtaagtta actgcacacc gcggaacgca
     2701 ctatacaacc agataaccat cgctacataa cgcagcggag ttttcggggc gatcgcgcca
     2761 atcagcgcag cacccagaac gccgaataac gcgcagcgtt cataaataca gagcacgcaa
     2821 ggtttcagta acatcacatg ctggaaccac agcgccgtca gttccagtgc cagagcagta
     2881 aacgccatca acagccacgc gccccggcct tgtgaacatt ggttcaaaaa tcgcaacata
     2941 atcatttccc tgcaatatgc atagagtgcg cagtttaaac caattcattc gctgcgccac
     3001 caggaggcag caaaaatagg acgcaattgg acaattatcg ggcgaaaagg caaaccgggc
     3061 atttatatgc ccggtaagtt gttatcaaag cgttgctatc cagcccattt gcataaacca
     3121 ttcggttaca ggggcaagcg taaactcgac gcagagcagc ccgacgagtg tcaggacgag
     3181 ggtgtaaggc agggccatcc acaccatgcg gccataagag aggcgaatca atggcgcgag
     3241 tgcagaggtc agcaggaaca ggaacgcagc ctgaccgttc ggcgtagcga cagagggcag
     3301 attggtaccg gtattaatgg cgaccgccag cagctcgtat tgcttcaacg tgatagcgcc
     3361 actttccatt gccgctttcg cttcgttgat ataaatcgtc cccacgaaga cgttatccga
     3421 aatggatgac agcagaccgt tgaaaatata gaacaacgac agctgagcat gttccgatgc
     3481 ctgcaacaca aactgaataa tcggcgaaaa cagttgttgg tcgataatca ccgcgactac
     3541 cgagaaaaac accgtcaaca gtgcggtgaa tggcagagat tcggtgaagg ctttaccgat
     3601 agcatgttca tcggtgacac cggtcaatga tgtcgccaga ataatgaccg acaaaccaat
     3661 caagccaacc tccgccagat gcaacgccag cgcagtcacc agccagacgc cgataatcgc
     3721 ctggacaatc agacggattt tatcctgacg ggtacgctgg tggcggcttt gatcgtcaaa
     3781 ctgttgcaac acttcgcgga ctttctccgg cagcgtttca ccgtagccaa accaacgcag
     3841 cttctctacc agcaggcagg ttaacaggcc acaaatcaga accggaacgg tcaccggcga
     3901 catgcgcagg aagaaatcgc caaaatgcca gccagccgct ttagcgatga tcaggttctg
     3961 tggttcgccc accatggtca ttacgccgcc taatgcggtg ccgacaccgg catgcatcat
     4021 caggctacgc agaaagccac ggaactgttc cagaaccact ttgtaatgct tgtcgatatg
     4081 actatcgtct tgcaggtcgg tatcttcagt acgggaagag gctacgcggt gataaatacc
     4141 ataaaaaccg actgcaacgc tgatcaccac cgccacgacg gttaaggcat cgaggaacgc
     4201 ggagaggaac gccgccgcca cgcaaaaaga gagcgacagc agcattttgg aacgaatgct
     4261 taacagcaaa cgggtaaata tgaacagcaa tagctgtttc ataaaataga tacccgccac
     4321 cataaacatc agtaacagca agacttcaag atttgccgcc acctcttcac ggacgtgttc
     4381 cgcgctggtc atgccgatga ataccgcttc aatagccaac agaccaccgg ggagtagcgg
     4441 gtagcatttc agggccatcg ccagagtgaa aataaattcc gctaccagca accagccagc
     4501 gacgaaaggg ctgatgagga aaattaacgg atttacgatt aagaaaatga tgagggcgag
     4561 tttgtaccag tcgggggact ggcccaaaaa attgcgccat agcgcgcggc cccaggagat
     4621 ctccatgatg gtttccctta ccttacaaat aatcaatgat gtttttatgt ttaaacgcaa
     4681 agcttaacgg tcaggcagga gtgaggcaag tcttgatagt caaggggaaa gagatgcgga
     4741 aaatgaagcc ttgatccctt ttttcttctt tttgtctgct atcagcgtag ttagccctct
     4801 ggtatgatga gtccaacttt gttttgctgt gttatggaaa tctcactatg gtcattaagg
     4861 cgcaaagccc ggcgggtttc gcggaagagt acattattga aagtatctgg aataaccgct
     4921 tccctcccgg gactattttg cccgcagaac gtgaactttc agaattaatt ggcgtaacgc
     4981 gtactacgtt acgtgaagtg ttacagcgtc tggcacgaga tggctggttg accattcaac
     5041 atggcaagcc gacgaaggtg aataatttct gggaaacctc tggtttaaat atccttgaaa
     5101 cactggcgcg actggatcac gaaagtgtgc cgcagcttat tgataatttg ctgtcggtgc
     5161 gtaccaatat ttccactatt tttattcgca ccgcgtttcg tcagcatccc gataaagcgc
     5221 aggaagtgct ggctaccgct aatgaagtgg ccgatcacgc cgatgccttt gccgagctgg
     5281 attacaacat attccgcggc ctggcgtttg cttccggcaa cccgatttac ggtctgatcc
     5341 ttaacgggat gaaagggctg tatacgcgca ttggtcgtca ctatttcgcc aatccggaag
     5401 cgcgcagtct ggcgctgggc ttctaccaca aactgtcggc gttgtgcagt gaaggcgcgc
     5461 acgatcaggt gtacgaaaca gtgcgtcgct atgggcatga gagtggcgag atttggcacc
     5521 ggatgcagaa aaatctgccg ggtgatttag ccattcaggg gcgataatcc cttccgttta
     5581 aaaagcaaac ccctcaaacg aggggttttt tgttgttttt acagatttcc cattcttggc
     5641 gggcaacgtt ccagcaactc gacgctgcca tcttcgtttt gctgttccag catcacatca
     5701 aatccccaca ggcgatgcac atgcttcagc acttctttgc gcccccgatc cagcggtgcg
     5761 cgattatgtg gaatgtaacg cagcgtcagc gaacggtcgc cgcgcaaatc cacgttccag
     5821 atctgaatat tcggctccag attacttaag ttatattgcg acgataaccg gttacggatc
     5881 tcccgataac cttcttcatt atgaatagcg gaaatctcca gataattatg ccgatcgtca
     5941 tccagcacgg tgaagaagcg gaaatcacgc atcactttcg gtgacagaaa ctggctgata
     6001 aaactctcat ctttgaaatc acgcatcgcg aaatgcagcg tttccagcca gtcggaaccg
     6061 gcgatatccg ggaaccagta tttgtcttct tccgttggcg actgacaaat ccgtttaata
     6121 tcctggaaca tggcgaaccc gagggcatac gggttgatgc cgctgtacca cgggctgtta
     6181 taggggggct ggaagaccac attggtgtgg ctgtgcaaaa actccagcat aaaacgttcc
     6241 gttactttcc cttcatcata cagatggtta aggatggtgt agtgccagaa ggtggcccag
     6301 ccttcgttca tcacctgagt ctgtttttgc ggataaaaat actggctcac cttacgcaca
     6361 atacgcagga tttcacgctg ccatgattcc agcagtggcg catttttctc cataaaatag
     6421 agcaggtttt cttgtggttc ggacggatag cggcgcgctt cagcaaccgt tttctcttcc
     6481 tcgcgcttcg gcagggtacg ccagagcata ttgacctgac tttgtagata ctcttcgcga
     6541 cttttctgcc gggctttctc ttcttgcagc gagatttttt gcgggcgttt gtaccggtcc
     6601 acgccgtagt tcatcagcgc gtggcacgag tccagaagcc gttctacttc atccacgcca
     6661 taacgttctt cgcactcggt aatatattta cgggcaaaaa tcagataatc gacaatcgaa
     6721 ctggcgtcgg tccaactgcg gaataagtaa ttgtttttaa agaaagagtt atgcccatag
     6781 caggcgtgtg ccatcaccag cgcttgcatg gtaatggtgt tctcttccat caggtaagcg
     6841 atacacgggt tagagttaat gacgatttca taggccagtc cttgctgacc gtgcttatac
     6901 agccgttcag tctcgataaa ctttttaccg aatgaccagt gcggatagtt aattggcatg
     6961 ccgacgctgg agtaggcatc catcatctgt tctgaggtta tcacttcaat ctggtgcggg
     7021 taggtatcca gccggtagag tttcgccacc cggtctatct ctgccagata aacatccagc
     7081 aggtcgaacg tccagtcggg tccatcgctc aaccgtgtgg tgtccttatt catagaatcg
     7141 atcgtcgcca tacgcgcacc tcattgttgt cggcgctctc tgtgtggagc acctcatttc
     7201 aagcatagaa cacctgttaa aaaccgcgtc gccggagaat ttttttcttt gcgatttctt
     7261 attatcagag tgccactaat ccgcttctga acggaatttt atgctggata aaaagggcgt
     7321 tcagcaggag atactaaaga cgccatattg ccgcagagtc agggagatgt gagccagctc
     7381 accataaaaa agctgtatgt tgaataatat tttcaactga gttatcaaga tgtaattaga
     7441 ttattattct tttactgtat ctaccgttat cggagtggct atgcgagttg tcatactggg
     7501 aagtggtgtg gtaggcgttg ccagcgcctg gtacttaaat caggcaggac atgaggtcac
     7561 cgtcattgat cgggagccgg gggccgccct ggaaaccagc gccgcgaatg ccgggcaaat
     7621 ctcccccgga tatgctgcac cgtgggcggc accaggtgtg cctttaaaag cgatcaaatg
     7681 gatgttccag cgccatgcgc cgctggcggt tcgtctcgac ggtacgcagt ttcagttgaa
     7741 atggatgtgg caaatgttac gtaactgcga caccagccac tacatggaaa acaaagggcg
     7801 gatggtgcgt ctggcggaat acagccgtga ttgcctgaaa gcattgcgcg ccgaaaccaa
     7861 tattcagtat gaagggcgtc agggtgggac gctgcaactg ttccgtaccg aacaacagta
     7921 tgaaaatgcg acccgcgata tcgccgtgct ggaagatgcc ggcgtaccgt atcagctgct
     7981 ggaatccagc cgcctggcgg aagtggagcc agcgctggca gaagtagcgc acaaactgac
     8041 gggtggtctg caactgccca atgatgaaac cggagactgc cagctgttta cccagaatct
     8101 ggcgcggatg gcagagcagg cgggggttaa attccgcttt aatacgcccg ttgaccaact
     8161 gctttgcgac ggcgagcaaa tctacggcgt gaagtgtggc gatgaagtga ttaaggccga
     8221 tgcgtatgtg atggcgtttg attcttactc gacggcgatg ctcaaaggca ttgttgatat
     8281 tccggtgtat ccgctgaaag gctactcgct gactattcca attgcgcagg aagatggtgc
     8341 gccagtatcc accattcttg atgaaaccta caaaatcgcc attacccgtt tcgataaccg
     8401 cattcgtgtt ggcggaatgg cggaaattgt tggttttaac accgagctgt tgcaaccgcg
     8461 tcgtgaaacg ctggaaatgg tggttcgcga tctctatcca cgcggcggtc atgtcgagca
     8521 ggcgactttc tggacgggtt tgcgcccgat gacgccagac ggtacgccgg ttgtcgggcg
     8581 tacacgcttt aaaaatctgt ggctgaatac cggtcacggc acgctcggct ggacgatggc
     8641 ttgcggttcc ggtcagttgt taagcgatct gctctctggt cgcacgccag cgatcccata
     8701 tgaggatcta agcgtagcgc gctacagccg tggatttacg ccatcacgtc cgggccattt
     8761 acatggcgca cacagctaag gaaacgagat gacccgtccg atacaggcca gcctcgatct
     8821 gcaggcatta aaacagaatc tgtccattgt ccgccaggcc gcgccgcacg cgggtggtaa
     8881 aagcgaacgc ttacgggcat ggtattgagc gtatctggag cgcgctcggg gccaccgatg
     8941 gctttgcatt acttaacctg gaagaggcaa taacgttacg tgagcgcggc tggaaggggc
     9001 cgatcctgat gctggaagga tttttccatg ctcaggatct ggagatttat gaccagcacc
     9061 gcctgaccac ctgcgtacac agcaactggc agctcaaagc actgcaaaat gcgcggctaa
     9121 aagcaccgtt ggatatttat cttaaagtga acagtgggat gaatcggttg ggcttccagc
     9181 ccgatcgcgt gcttaccgtc tggcagcagt tgcgggcaat ggcgaatgtt ggcgagatga
     9241 ccctgatgtc gcattttgcc gaagcggaac atcctgatgg aatttccagc gcgatggcgc
     9301 gtattgagca ggcggcggaa gggctggagt gtcggcgttc gttgtccaat tcggcggcga
     9361 ctctgtggca cccggaagcg cattttgact gggttcggcc tggcattatt ttgtatggcg
     9421 cttcgccgtc cggtcagtgg cgtgatatcg ccaataccgg attacgtccg gtgatgacgc
     9481 taagcagtga gattattggt gtccagacgc taaaagcggg tgagcgtgtg ggctacggcg
     9541 gtcgctatac tgcgcgcgat gaacagcgaa tcggcattgt cgccgcaggg tacgccgacg
     9601 gttatccgcg ccacgcgcct accggtaccc ctgttttagt ggacggcgtg cgcaccatga
     9661 cggtggggac cgtctcgatg gatatgctgg cggtcgattt aacgccttgc ccgcaggcgg
     9721 gtattggtac gccggttgag ctgtggggca aggagatcaa aattgatgat gtcgccgccg
     9781 ctgccggaac ggtgggctat gagttgatgt gcgcgctggc gctacgcgtc ccggttgtga
     9841 cggtgtaact tgttgtaagc cggatcggag gcaacgtctt ctgggtgcaa aaaaaatcat
     9901 ccatccggct ggtcagcaac tgtagttgtt aatgtgacag agccattgcc catgatagtg
     9961 tccattaaaa ggatggacac tatttccccg gaacctgaac tcaccgcaca ggcgttctac
    10021 ataaaacgct tacgcttcat tgttgactcg gagtcgactt cagataaatc acgctttacc
    10081 cttgatggag cctgtacata gatttgtgta attgcctgat tttgatatgt tcaattcaac
    10141 atcaaatgaa ggttaaatta tggacgacaa acaattgcag gctcaggctg cgttcagcaa
    10201 agcatcgcaa ccggcgatag atgcttcatt aaatttaaga ttcagcttcc tcttcagcca
    10261 cccgtacgcc aatcttcaac acttcattat cttctttctc ggccaccgtc cagatcatcc
    10321 cggcaaactc tacctggtca ccgacaaccg gtgccgtgcc taacaactgc tggacaattt
    10381 cacccagcgt ttgctgctta tcacgatatt ctcgcccgtc ttccaggcca tatatcagcg
    10441 caacatcagc atatttggcg ctggcttcga gaatgaagtc accaaagaag cgttgatcca
    10501 gcgcgaccgg cggcgactgg ctgaacagtt taccgagcgc cggaagatcg cgttcccgac
    10561 caattacaca caacacatcg ccttcgcgca gtcgggtgct gccggtagga tgaagcaact
    10621 ggttatcacg aaacagtgcc gcaatacgcg tctcttttgg catatgcaaa tcgcgcagtg
    10681 ccgcgcccac gcaccattta tcggcactca attgataaac aaactgctcc cacggatttt
    10741 ccggatgaat atccaggcca acgcgtgaca ccggacgtcc cactggcgga accaccactt
    10801 tggctttttt agccgcccac gagagtgatg ttccctgcaa gagcagtgaa accagaacca
    10861 caaagaaggc gacattaaag aacagacgtg cattctccag ccccgccatc atcgggaaca
    10921 cggccaggat gattggcacc gcgccgcgta atcctaccca gctgataaac acgcgctcac
    10981 gcagattgaa accgcggaag gggagcaatc cagcaaatac cgaaagggga cgggcgaaga
    11041 atatcatcca tgccgacaaa attagcgccg gaatggcaat aggcagcaga tcgcttgggt
    11101 taaccaatag ccccagcacc aggaacatgg cgatttgcgc cagccaggcg aggccgtcga
    11161 aattttgcag gatgccgtag cggttgcgaa tcggccgatt acccagcaga aaaccgcaca
    11221 gataaacagc cagaataccg ctgccttcca gcgccgtggt taaagcaaaa attaaaatac
    11281 cgccgcttaa tgccagcaat ggatataatc cggcaggcag ggcgatgcga ttaatcattt
    11341 gcagcagtaa ataaccaccg ccaagtccga tgacaatccc gaggccaaat tgctgcagaa
    11401 tatcgaccac gaacatccaa ctgacactgc tttcatgttg ctggatcatc gcaatcaggg
    11461 taatcgtcag aaagaccgcc attggatcat tactgccgga ttcaatttcc agcgtcgagc
    11521 caacacgttc gttaagcccc ttaccaccca gcagagaaaa gaccgctgca gcatcggtag
    11581 agccgacgat agcgccgatt aataagcctt caatcaaatc aagattaaac agccacgccg
    11641 ccatcatgcc ggttaaacca gaggtgataa gcacgcccag cgtcgccagc gacagtgccg
    11701 gtcctaacgc cacacgaaag gaactggcct gagtgcgcat cccgccgtcg agcaaaataa
    11761 tcgccagtgc caggttactt accatgtagg cgaaggggta attatcaaac gggataccgc
    11821 cgacgccatc gactcctgcc agcatgccga tcgccagaaa aataaccaga ataggaatgc
    11881 caagacggga agaaaatgaa ctaagtaata tactgctggt gacaaggatg gatcctaaga
    11941 tgaaaaggct aattattgtt gtggcatcca acggtcggtt actcctgatt acgctgtctc
    12001 ttatataaac cctaccatat tagcggcaga gacagcgttt tacttagccc tgaagcgtga
    12061 tttttttaca ttttaagaac aggatgaccg ctaatcgtca actgagtgcc ttcccgggtg
    12121 ttattcagaa tggcatgtgc gcccaacggc agcgtaaccg tgcgttgttc atgaccaaaa
    12181 tcgaggccgg taatgagtgg aatcgacagg cgggaacgca aaaacgcgga cactgactcc
    12241 aggttgtaac ctgcgtcata atcattgggc gtgctgccgc taaagctacc gagaataatc
    12301 gccttctgac gtggcaaaat tcccgcatga tagagctgca acagcatacg ttcgacgcgg
    12361 aaagggtgct cgttaatatc ttccagtacc aggataccgt tctcaatttt tggcatccac
    12421 ggtgtaccaa tcagtgaaat cagcatcgca agattgcctc cccacaacgt gccttcggtc
    12481 tgacatgtcg ggccttcccc ttgccattca atggtgaagg ttttattgcg taacgccagc
    12541 cagaaatggt gctcggtaaa ggcgttcagt tcatccgcac caaagtttgc taccagcatg
    12601 gggccgctaa aggtgatgac attgccttgc gccagaagac cgcactgaat ggcggtaaaa
    12661 tcgctatgtc cgcaaatgag taacgggtca tgttgttggc gagccaccag tgcctgccag
    12721 tcaatatctg ccagtaaacg actggcaccg taaccgccgc gtacagccag cacgatggtg
    12781 ttgggtgtag tcagtctggc aagggaattg agatcttcca gacgctccgt ttccgtaccc
    12841 gcaaaacgct cacaacgacg ggcaataacc tcgacgttat tgacttgatg ccccgcgtcg
    12901 gtaaggcgct ggataccacg cagcgcggcg tgctgtttaa tgctgtaacc cgatggggca
    12961 attaagtgaa acagagacat ggcaattcct tgctgacaac agaaacgaaa tgtatatcat
    13021 gccgcttagg tgtgccgttg tcacctcaac ggcgattcca ggctataagg atagaagaag
    13081 tgaaattgag atggtttgcc tttttgattg tgttattagc gggttgttca tcaaagcatg
    13141 actatacgaa cccgccgtgg aacgcgaaag ttccggtgca acgtgcgatg cagtggatgc
    13201 caataagcca gaaagccggt gcagcctggg gcgtcgatcc acaattgatc acggcgatta
    13261 tcgctatcga atcgggtggt aatccgaacg cggtgagtaa atcgaatgcc attggtttga
    13321 tgcagttaaa agcttcaacc tccggacgtg atgtttatcg ccgtatgggc tggagtggtg
    13381 agccgacgac cagcgagctg aaaaatccag agcgtaatat ttcaatgggg gcggcttacc
    13441 tgaatattct ggaaaccggc ccgctggcag gcattgaaga tccgaaggta ctgcaatatg
    13501 cgctggtggt gtcatacgct aacggggcag gtgcgctgct acggactttc tcgtcagatc
    13561 ggaaaaaggc gatcagcaaa atcaacgatt tggatgctga cgagttcctc gatcacgtag
    13621 cgcgcaatca tcctgcgccg caggctccgc gctatatcta caaacttgag caggcactgg
    13681 acgcgatgta aatcagtcgc gtactttgtc cgctttctcc cgggcttccc gctcgagaga
    13741 gaaaataatc cgttgtaatt gccgctccac cgtcgggctg acgttaagaa aacggaagct
    13801 cagacgggga gtggtgatgg tttcattctt gccatcaatc actttgcgct cgctgatgga
    13861 gattaactgg gcgtcaaagt gaaaaacacc ccattgcccc atgttgactt caatctgagc
    13921 gaagcgcatg ccttcttgta attcggcagg ctttgctgtt tccagtaatg cgcccatgcc
    13981 gcctaacgac aaatcataca ggcggaaacg taacgtactg ttatccgcca gtttggtctg
    14041 gcaaaaataa ggcggatgga gtggggcgga gatgcggaaa tatcggcgtc gttgtacaaa
    14101 ccataaggtg ggaggcggta cggtaataaa tgccggaagc tgcaagtatt cactctgctg
    14161 tagttgttca acagtaaact cgactttcgc accctgagtt tcggcggtaa tggtaatatg
    14221 ctgcgccttt agcacggcga tgttgtcttc ggcttgactg ccgaaatcca gcaccagttt
    14281 atccggggtt attgccagta ttttgctgat cagctgcccg ccattccaac tgagacgcaa
    14341 aggaattgcg gctttgtgca aatcgcgtaa cacgcccagg acggctaacg gattttgttt
    14401 caggaactgc tcatggtaat gactcacgcg gaaaaactcc tgactgacaa actgtctttg
    14461 gtttatcggt cacagttaac aaaacttaat acaaatgcgt gaatattttt tacatgttgt
    14521 tcttaaatca gccgacatac gcccagcatc gatcccgccc ttgcctatac ttagagcgtt
    14581 gacgtaagca tttcttgcgt ccgattcatc gaaacgaggg cttgaacatg ggaattattg
    14641 cctggattat ttttggcctg atagccggca ttatcgccaa gctaatcatg ccggggcgtg
    14701 atggtggtgg atttttccag acctgtattc tcgggatagt cggtgcggtg gtcggcggct
    14761 ggctggcgac catgtttggc attggcggct ccatcagcgg ttttaatttg cacagcttcc
    14821 tggtggcggt ggtgggagct attctcgttc tgggcttatt ccgcctgctg cgaagagaat
    14881 aagattttca taaggcggat agcgatacag atgccgctat ccgcttttca catcagaacg
    14941 tatattcgac acctgcttta cgggtgaaaa aaatcaatat agcacttcga tatccgataa
    15001 agtcggttcc cggtaacaac aacagaatcc ttttttaatt attgtttcgt tgtttttggt
    15061 gtgattcaga aaataaatat tttagacagt agccagtcag gcgttaaaaa tggggcggat
    15121 agtgaggcgg ttttggctgc gcttattgaa catttagaat tgatcaatcc ttctggcaga
    15181 ttaagccaaa atacccgttc ggcaatgctt cagttacgcg aagaggaatg gtctgaattc
    15241 tttttttggt tgctaaattc tctggagtgt ctggattatg tgattattaa tttaactcca
    15301 gaaagcaaaa aaacgttgat gagtgaacac cgtaacaata ttcaggtagc aatcgatgct
    15361 ttatataggc aacgtcggtg taaatcaccg ggggatgata gtgaaacact tacccgtaga
    15421 aatgacgcta tcttcggcaa ccacgtatgg caaacatttg cgcaatactt cccgccagga
    15481 cttgaaaaac cggctgtgta gaaaacacca tagctatggt gttatctgcc gacaacgcca
    15541 tccggagaag ccgaatgacg ttgtcggagt aagcgctggt taaggtgtgg gttgtgcctc
    15601 tttggttgag ggttgcgtcg ttgctgactt aacggtcgga cgcgtcgccg gaacattgtc
    15661 acacggttgc tctttcgggc agatcaaatc cagcattttc agcgtcacgc cattggtcca
    15721 gccaaagcca tcctgtaatg gatattcgcc acctcttttt gcccgtagtt ttgtaatcct
    15781 tctgtcgcga cccactgtaa cggtgcccag ccatttggcg catcccattg ttgcccactt
    15841 ttcaccgacg tggtgttcag gccgccgggt tgcagcagat gtgttttcgt cgccgtcgcc
    15901 attttgttgg cgcgatcttt cgctgccgca ttgacgtaca gcgggaacag ggcggccgcg
    15961 gttaactgat tgcgcacttt atgacttttc aggtcgtaat cggcatacca gccttgttga
    16021 tcgttccaca ggtatttttc gattcctttt tgacgggcat tcgccagcgt ttcgtactgg
    16081 tttgccatcg cgttatctcc tgcagctttg ctggcgcggg cgaggatttt ttccatttta
    16141 aacatcaggc tgttcagatc gaccggtacg atgctggtgg tgcgtaaggt atttaactgc
    16201 tgcgggttgt ccatccagcg cgagctgaaa tcccagccag acgcagcggc agagcgcagg
    16261 tcgcggtaaa tttcagtggc aggtcgattc ggattgcttt tggcggtggc aatatcttcc
    16321 acccatgact ctggtcgtgg cgtatcgcga tcgtcccagt agcggttgag aagggtacca
    16381 tcctgaagtt tgacaacgcg tttttcctgt tgtccggctt gcaggttttc aacaccgtcc
    16441 atccagtaag catattcttt ttgcatttgc ggcaggtatt gcttcaacgc ggcatcgcct
    16501 tcatgctgcg ccagtaactc taccatcagg gcaaagaagg gcggttgcga gcggcttaaa
    16561 tagtaactgc ggttgccgtt gggaatatga ccgtaagtgt ctatttcatg agcaaaattg
    16621 gccaccatat ccgcgacttt atcccagtga ccgctttcgg caagtcctaa catggtgaag
    16681 taactgtccc agtaatatac ctcgcgaaaa cgtccgcccg gcacgacata aggttccggc
    16741 agcggtaaca gagaatccca tttttcggtg ttttcggtag aacgcgttaa taccggccaa
    16801 agtccgtcaa tatgttcgcg cagtgactgc ccctctggcg gaacatattt ctcgccttct
    16861 ttcggcaggg tgaaattgac gttaacgaaa tggcgcagat caaatccgct ctggttttgc
    16921 tgcatccgat aatcagcgga tcgctgttcg gcacggcatc ggcaaaggtt ttttggtccg
    16981 gaaaaagttt ggcgttttgc acatcattaa acagcggccc taataaaata tcaggcggct
    17041 gtggtgttac cggtgtttct tctgcctgca ccgatagcgc agcgaaacac aaaaagatac
    17101 aggc
//
LOCUS       DAJVUK010000091        16611 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.091, whole genome shotgun sequence.
ACCESSION   DAJVUK010000091 DAJVUK010000000
VERSION     DAJVUK010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16611
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.091"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..246)
                     /locus_tag="OQQ57_002664"
     CDS             complement(<1..246)
                     /locus_tag="OQQ57_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000100290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCS1957373.1"
                     /translation="MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHK
                     IQQMMGARKGRGYLLAALLGAVTPFCSCSTIPIVTWIV"
     gene            353..649
                     /locus_tag="OQQ57_002665"
     CDS             353..649
                     /locus_tag="OQQ57_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1957374.1"
                     /translation="MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGI
                     PGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA"
     gene            complement(783..1208)
                     /gene="arsC"
                     /locus_tag="OQQ57_002666"
     CDS             complement(783..1208)
                     /gene="arsC"
                     /locus_tag="OQQ57_002666"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HCS1957375.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
                     VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
                     TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
     gene            complement(1221..2510)
                     /gene="arsB"
                     /locus_tag="OQQ57_002667"
     CDS             complement(1221..2510)
                     /gene="arsB"
                     /locus_tag="OQQ57_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HCS1957376.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
     gene            complement(2565..2918)
                     /gene="arsR"
                     /locus_tag="OQQ57_002668"
     CDS             complement(2565..2918)
                     /gene="arsR"
                     /locus_tag="OQQ57_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HCS1957377.1"
                     /translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRN
                     LARQNCSADSKNICS"
     gene            3657..3740
                     /locus_tag="OQQ57_002669"
     CDS             3657..3740
                     /locus_tag="OQQ57_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HCS1957378.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(3794..5146)
                     /gene="gorA"
                     /locus_tag="OQQ57_002670"
     CDS             complement(3794..5146)
                     /gene="gorA"
                     /locus_tag="OQQ57_002670"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HCS1957379.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKMLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSEHLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(5218..6060)
                     /gene="rlmJ"
                     /locus_tag="OQQ57_002671"
     CDS             complement(5218..6060)
                     /gene="rlmJ"
                     /locus_tag="OQQ57_002671"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase"
                     /protein_id="HCS1957380.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW
                     IVPE"
     gene            6263..8305
                     /gene="prlC"
                     /locus_tag="OQQ57_002672"
     CDS             6263..8305
                     /gene="prlC"
                     /locus_tag="OQQ57_002672"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HCS1957381.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTQALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            8313..9065
                     /gene="rsmJ"
                     /locus_tag="OQQ57_002673"
     CDS             8313..9065
                     /gene="rsmJ"
                     /locus_tag="OQQ57_002673"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709277.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HCS1957382.1"
                     /translation="MKICLIDETGAGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVTTPNAVVTKGHRFDIYAGTPV"
     gene            complement(9114..10583)
                     /gene="dtpB"
                     /locus_tag="OQQ57_002674"
     CDS             complement(9114..10583)
                     /gene="dtpB"
                     /locus_tag="OQQ57_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HCS1957383.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINSVSFQALNPFWVVLASPILAGIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(10901..11335)
                     /gene="uspA"
                     /locus_tag="OQQ57_002675"
     CDS             complement(10901..11335)
                     /gene="uspA"
                     /locus_tag="OQQ57_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HCS1957384.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            11726..12061
                     /gene="uspB"
                     /locus_tag="OQQ57_002676"
     CDS             11726..12061
                     /gene="uspB"
                     /locus_tag="OQQ57_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HCS1957385.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(12305..13804)
                     /gene="pitA"
                     /locus_tag="OQQ57_002677"
     CDS             complement(12305..13804)
                     /gene="pitA"
                     /locus_tag="OQQ57_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HCS1957386.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKIPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            14036..15238
                     /locus_tag="OQQ57_002678"
     CDS             14036..15238
                     /locus_tag="OQQ57_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCS1957387.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(15553..16605)
                     /locus_tag="OQQ57_002679"
     CDS             complement(15553..16605)
                     /locus_tag="OQQ57_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HCS1957388.1"
                     /translation="MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLI
                     SLAAICLALFTTAFIIISQLTRGVNTFYNILFPIIGYAGSIITMIWGWALLAGNDVMA
                     DEFVAGYVIFGIGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLI
                     AVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQTRNTF
                     STKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAPGIILIYLGMICYSIFSKVWL
                     LALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCF
                     TLFSIVSILEAGSAKK"
BASE COUNT         4269 a         4234 c         4312 g         3796 t
ORIGIN      
        1 aacaatccac gtaacaatgg gtattgtcga gcaactacag aacggggtaa cggctcccaa
       61 cagagcagcc aggagatagc ctctcccttt tctggccccc atcatctgct ggattttatg
      121 gtctggcacc ttttgtctta tcaggctgac accggcacta atcactataa acagcaacga
      181 aagctcgacg gcgagaaaca caaacatctc tgcggcatct tgcagcatcg caagccaact
      241 actcatacgt aacctcattg gataaatcta tatttccaga ataatcgaaa tgaaattcag
      301 atcaagatat ttctggtatt atcgaaatat caaccagaca gaggggtgtc atatgcagtt
      361 ggaagaagtc gctaaagcgc tgaaagagct aggtcacccg acccgtttgt tcatatttaa
      421 acatcttgtc aaagccgggg aacaagggtt gccggtcggt gagttgcaaa agcagcttgg
      481 gatacctggc tccacactca gccaccatat atcagcactg gtatcggtag gactggtcaa
      541 acaaaaccgt gagagtcgga cgctgatgtg tgtttcgcaa tacgcaatgc tggaagcgat
      601 aattgaattc ttacgcgagg agtgctgcgt aaatagcaaa attgcctgat gcgctacgct
      661 ctacatattt catgccatat attgaatttg cacggttttg taggtcggat aagacgcgtt
      721 agcgtcgcat ccgacataaa caaagcgcac tttaccaact atcggcagtg gatatcgccg
      781 ctttatttca ggcgcttacc cgcttcatca accactttct cgccatcttc cttggagaat
      841 gcgccttttt gcgcatctgg cagaatttcc agcaccactt ctgaagggcg gcacaggcga
      901 gttcccagcg gcgtcaccac aatcgggcga ttaatcagaa tcgggtgctg aagcataaag
      961 tcgattaacc gatcgtcagt aaatttatct tccgcaaggc ccagctcctc atacggttcg
     1021 acgtttttac gcagcagcgc gcgtacggaa atccccatat cggcaatgag tttgaccagt
     1081 tcatcgcgcg ttggcggagt ttccagataa tggataatgg tcggttctgt gccgctgttg
     1141 cggatcatct ccagcgtatt acgcgacgtg ccgcaggccg ggttgtgata aatggtaatg
     1201 ttgctcatat cagtatctca ttacaaagtg aaagagagac gtagcgccag cgcagccagc
     1261 gtcacaaaca gcacaggcag ggtcatgata atccctgtac ggaagtaata tccccagctg
     1321 atagtcatat tcttctgcga aagtacgtgc agccagagta gtgtagccag gctaccaatt
     1381 ggggtaattt tcggtcccaa atcgcagcca atcacattgg cataaaccat cgcttctttg
     1441 ataacgccag atgccgtgct gccatcaatg gacaacgcgc caaccagtac cgtcggcata
     1501 ttgttcataa tagaagagag gaaggcggtg aggaatccgg tgccgagcgt cgcggcccac
     1561 aggccgttat ccgccagcac gttgagtacg ccagaaagat attccgttaa tccggcattg
     1621 cgcaggccat aaaccaccag atacatgccg agcgagaaga tgacaatttg ccagggggca
     1681 ccgcgcagga ctttacccgt attaatcgca tgaccgcgtt tagcgacgac aaataatatc
     1741 agcgcgccca cagctgcaat ggcgctcacc ggaatgccga gcggttccag gacgaaaaat
     1801 cccaccagca gaagcagtaa aacaacccag ccagttttga acgtagcagg atctttgatc
     1861 gcttctgcgg gagatttcag cagcgccata tcgtagttct gcggaatatc tttgcgaaaa
     1921 tagagatgta gcatcaccag cgtggcaaca atcgcggcga tatccaccgg caccatcacc
     1981 gaggcgtatt cgcgaaagcc gaggccaaag aaatcagcgg aaacgatatt caccaggttg
     2041 gagacaataa gcggcaggct ggcggtatcg gcaatgaatc cggccgccat cacgaacgcc
     2101 agcgtcgtgc ctttactgaa tcctaaagcc agcagcatgg cgatgacaat cggcgtcaaa
     2161 ataagcgctg cgccatcatt ggcaaacagg gcggcaacgg cagcaccgag caggacaatc
     2221 caggtaaaca gcaagcgacc acgaccatta ccccagcgtg agacgtgcag cgccgcccat
     2281 tcaaaaaagc cggactcatc cagcagcagg ctgatgataa tgacggcgat aaacgcagcc
     2341 gtcgcgttcc agacgatatt ccacaccacc ggaatatcac ccggatggac cacgcccgta
     2401 actaacgcca gtactgcgcc gagcgttgca ctccagccga tgcctaaacc tttcggctgc
     2461 cagataacca atacaatggt caggacaaag atagcgcctg ccagtaacat aatgcctcct
     2521 ggataaaaca catgcgaaaa tacatatgtg tttagctaaa ttttttaact gcaaatgttc
     2581 ttactgtctg cggaacagtt ttgtcgagcc aggttgcgga caattgcctg aatcttttcc
     2641 tgttcacatc gccaggcttc atcaattatt ttcgccgccc atgctggaat atgcggcgat
     2701 aagcggtaat gaacccattt accttgcttg cggtccagca atagcccgct ttcacgcagc
     2761 aatgccaggt ggcgggagat cttgggctgc gactggtcga gagcagtgca gagatcgcag
     2821 acgcataact ctcccagttc gctgagcagt aaaacgatgc ccagacgggt ttcatcagca
     2881 agaattttga acaattggat gggtaacaga aatgacatat tgcgctcctg attgttgcag
     2941 gtagtgtctc tcttcgaagc ggataagtca aaaacatata tgatttaacg aatgtgtaag
     3001 tgcagaggaa ggtaataggt gtgaattttg agttggctat tcatttgaaa ggaggtctga
     3061 atcaggacgt aaaaaaaccg actttgcgtc ggttttttac tttccagccc tgagttggtg
     3121 gctctggctg gagtgagaga gttcttatct aacagctcaa tactattagc cagtggctaa
     3181 cattgcaaga attagcgatt tcttcagctg gcggagggag cacttcggta tatatcgcag
     3241 tgacgattta tatactttca ctgggtcatc gtcatattaa gccttgtccg aatccggatg
     3301 taaaaaaccg actttgcgtc ggttttttac tttccagccc tgagttggtg gctctgactg
     3361 gagtgagata gccatcatct aacgcatcaa tgctaatacc atactgaaac tattgcaagg
     3421 acgtgctggt tttataacct gcatgtactg tatgattatc cagttagctc tgaggcattt
     3481 tcactctggc aatgcgcata aacgctttca aagtcctggt cagaagtacg ggtggtgccg
     3541 ttaactgatg ctctggccgg agtgagagag ttcttatcta acaatgagac atgcgccgtg
     3601 acaggcagtg gatgagtaag cggatgcatt ctcactccat cgcatggaga aaacgggtga
     3661 ttgataaagc aatcatcgtt ctaggggcgt taattgcgct gctggaactg atccgctttc
     3721 tgcttcagct tctgaactga tagcggaaac gtaattaagg gctaagagca cactactctt
     3781 agccctttaa catttaacgc attgtcacga actcttctgc cgccgttggg tgaatggcga
     3841 cggtattgtc gaagtctttt ttggttgccc ccatcttcag cgccaccgcg aagccctgca
     3901 acatttcgtc cataccaaag ccaatgccgt gaataccgac aatcttctct tccgatccaa
     3961 cgcacaccag cttcatgcgg cacggctggc ggtgagtggt gacggcggta tacatcgcgg
     4021 tgaaagagga tttatacact ttcacctgat cgtcgccata ctgctcgcgc gcctgcggtt
     4081 ccgttaaacc aacagtacca atcggcggat ggctgaagac cacggtcgga atgttgctgt
     4141 aatccagatg ctcatccggc ttgttattaa acaggtgttc agagagacgg cgacccgctg
     4201 caactgccac cggtgtcagc tccactgcac ccgtgttatc gcccaccgcg taaatacctt
     4261 caatgttggt gttttgatat ttatcgacga cgatatagcc tttttcgttg gttttaacgc
     4321 cagcggcttc gaggttgatg ttgtcattgg caggctcgcg accaatcgcc caaatcaggc
     4381 aatccaccgt ttcactgcga ccatcttcca gctccagcgt caggctacca tcggcatttt
     4441 tcactaccgc tttcgggatg gcgttggtgt gcagctgcgg gccttcggcg ttcatcactt
     4501 cgaccagcgt ttcggaaatc atcgggtcga agctgcgcag cggcgcatgt ttacgcacaa
     4561 acagatgcgt tttcgcgccg aggccgttaa tcacgcccgc cagctcaacg gcgatgtaac
     4621 ccgcgccaac aaccgccacg cgctctggca aagcaggaag ggcgaagaag ccatcagaat
     4681 caataccgta ttccacgccc ggaatatccg ggtggctcgg acgaccgcct gtggcgatca
     4741 gaatatgatc ggccgtgatg gtttcgccgt ttacctccag cattttggca tcaacgaagc
     4801 gggcaaagcc tttgattaca tcaacgttat ttttaccgag cacgttttca taggaagtat
     4861 gaatacggtc gatataggcg gtacggctgg cgatcaacgt ttcccagttg aacttgttga
     4921 tggtggtatc gaaaccataa tcagggccgt acatatggat cgcttcacgg atttgcgccg
     4981 cgtgccacat cacttttttc ggcacgcagc cgacgttcac gcaggtgccg cccagctctt
     5041 tggcttcaat cagtgcgcat ttctggccgt acatagccgc gcggttgatg gaggctatac
     5101 cgccgctgcc gccgccgatg gcgatgtaat catagtgttt agtcatgaca gagtgtcctt
     5161 atcgttgatt accgcgattg tagcgcgaga cgtaataggt gccagcaatg gctgcaatta
     5221 ctccggcacg atccagctta cggtggcgtg cccggtgcct gccggaacca gtttgctgtg
     5281 cagccacggc agcacgttat tcatctgctg ttccagtttc cacggcgggt taatcacaat
     5341 catgccggaa gcggtcatgc cacggcgatc gctgtctggc agtaccgcca gttcaatttg
     5401 cagaattttg cgaataccgg tcgcttccag atcgtggatc atgcgcttaa tttgctgacg
     5461 cagcaccacc ggataccaca gtgcgtaagt accagtggcg aaacgtttgt aaccttctgc
     5521 tatcccgctg accaccgcct gatagtcggt tttcatttca tacggcgggt cgataaggat
     5581 taaaccacgg cgggaaaccg gcggcagttt ggccttaagc tgctggaaac catcggcttt
     5641 ttcgacgcgc gcacggctgt ctttctgaaa ttcagaacgc agcaacgggt aatcgctcgg
     5701 gtgcagttcg gtcagttgca ggctgtcttg ttcgcgcagt agctggcgag caatcaatgg
     5761 cgaaccgggg tagtaacgca actgaccgct acggttgaag tgttttacca cattgatgta
     5821 cgcctccagt tctgcgggca aatcgtcctg ctgccagata cgggcgatgc cttcgagata
     5881 ttcgccggta cgctcggcat gttcgctgcc taactgataa cgcccggccc ctgcgtgggt
     5941 gtcgagatag agaaacggtt tatctttctc tttcagcgac tcgatgatca ggctctgaac
     6001 ggtatgttta aggacgtcgg cgtggttgcc agcgtgaaag ctgtggcgat aactgagcat
     6061 gggtaaaggt gttccggtaa gtaaaaatcg gcccgtattc ggggcgcaca aaagcgtatc
     6121 aggacagtat accgaaaaga ggccgccgcc gcgaaagcgt aacgtttctc attgaaattc
     6181 actacactta accccatgct acacacatta tgtaaagcgc ctgttgagcg cttccttaac
     6241 ctctttaacc aggactgcgc gaatgacgaa tccgttactg actccctttg aattgcctcc
     6301 gttttctaaa attctcccgg aacatgtcgt tccagccgtg actcaggcgc tgaacgattg
     6361 ccgcgaaaat gtggagcgcg tagtagcgca aggggcaccg tacacctggg aaaatctctg
     6421 ccagccgttg gcggaagtgg acgatgtgtt ggggcgtatc ttctccccgg tcagccacct
     6481 gaactcggtg aaaaatagcc cggaactgcg tgaagcctac gagcaaaccc tgccgctgct
     6541 gtcggaatac agcacctggg tagggcaaca tgaagggctg tataaagcgt accgcgacct
     6601 gcgcgatggc gatcattacg ccacgctgaa cacggcgcag aagaaagcgg ttgataacgc
     6661 cctgcgtgat tttgaactct ctggcatagg tctgccgaaa gagaaacagc agcgttacgg
     6721 cgaaattgcg acccgtcttt ctgaactggg caaccagtac agcaacaacg tcctcgatgc
     6781 gacaatgggc tggaccaaac tcgttaccga cgaagcggag ctggcgggga tgcctgaaag
     6841 cgcgctggct gcggcaaaag cccaggccga agcgaaagag ctggaaggct acctgctgac
     6901 gctggatatc ccaagctacc tgccggtaat gacctactgc gacaaccagg ccttgcgtga
     6961 agagatgtat cgcgcttaca gcacccgcgc ctccgatcaa ggcccgaacg ccggtaaatg
     7021 ggataacagc aaggtgatgg aagagatcct cgctctgcgt cacgaactgg cgcaactgct
     7081 gggctttgaa aactacgcct ttaaatccct tgccactaaa atggcagaaa acccgcagca
     7141 ggtgctggat ttcttaaccg atctggcaaa acgcgcgcgt ccgcaaggcg aaaaagagct
     7201 ggcacaactg cgcgccttcg ccaaagcgga atttggcgtc gatgagttgc agccgtggga
     7261 tatcgcgtac tacagcgaaa aacaaaaaca gcacctctac agcatcagtg acgaacagct
     7321 gcgtccgtac ttcccggaaa acaaagcggt taacggcctg tttgaagtgg tgaaacgtat
     7381 ttacggcatc accgctaaag agcgtaaaga tgttgatgtc tggcatccgg atgtacgttt
     7441 cttcgaactg tatgacgaga acaacgaact gcgcggcagc ttctacctcg atctgtatgc
     7501 ccgtgaaaac aagcgcggcg gggcgtggat ggatgactgc gtaggccaga tgcgtaaagc
     7561 tgacggttct ctgcaaaaac cggtcgcgta tttgacttgt aacttcaacc gcccggtaaa
     7621 tggtaaaccg gcgctgttca ctcacgacga agtgatcacc ctgttccacg agttcggtca
     7681 cggcctgcac catatgctga cccgcatcga aaccgctggt gtttccggta tcagcggtgt
     7741 gccgtgggat gcggtcgaac tgccgagtca gtttatggaa aactggtgct gggagccgga
     7801 ggcgctggcg tttatctctg gtcactatga aaccggcgaa ccgctgccga aagagttgct
     7861 ggataaaatg ctggcggcga agaactacca ggcggcgctg tttattctgc gccagctgga
     7921 gttcggcctg ttcgatttcc gcctccatgc cgagttccgc ccggatcagg gtgcgaaaat
     7981 cctcgaaact ctggcagaaa tcaagaaact ggttgccgta gtaccgtctc catcctgggg
     8041 ccgtttcccg cacgctttca gccatatttt cgccggtggt tatgccgcag gttactacag
     8101 ctacctgtgg gctgacgtac tggcggcaga tgccttctcg cgctttgagg aagagggcat
     8161 tttcaaccgt gaaaccgggc agtcgttcct cgacaacatt ctgagccgtg gcggttcaga
     8221 agagccgatg gatctgttca aacgcttccg tggtcgtgaa ccgcagctgg atgcgatgct
     8281 ggagcattac ggcattaagg gctgatcatt cagtgaaaat ctgcttaatt gatgaaacag
     8341 gcgccggaga cggcgcctta tctgttctgg cggcccgctg ggggctggag cacgatgaag
     8401 acaacctgat ggcgctggtg ttaacgccgg aacatctgga attgcgcaag cgtgatgagc
     8461 caaaacttgg cggcatcttt gttgattttg ttggcggagc gatggcgcac cgacgcaaat
     8521 tcggcggtgg tcgcggtgag gcggtggcga aagcggtggg cattaaaggc gattatttgc
     8581 cggatgtggt ggacgccacc gcagggctgg ggcgcgatgc ctttgtactg gcttcagtcg
     8641 gctgccgcgt gcggatgctg gagcgtaatc cagtggttgc cgcgctactc gacgacggcc
     8701 tggcgcgtgg ttatgcggat gcggaaatcg gcggctggtt gcaggagcgg ttgcagttaa
     8761 ttcacgcctc cagcctgacg gcgctaaccg atattacccc acgcccgcag gtggtctatc
     8821 tcgatccgat gttcccgcat aagcagaaaa gcgcgctagt gaaaaaagag atgcgtgtct
     8881 ttcagtcgct ggtgggaccg gatcttgatg ccgatggatt actggagcct gcacgcttgc
     8941 tggcgaccaa acgcgtggtg gtaaagcgcc cggactacgc gccaccgcta gcgaatgtca
     9001 ccacgccaaa cgcggttgtg actaaagggc atcgctttga tatctatgca ggtacgcccg
     9061 tgtaaaagta aagcagggta gcgataacgc taccctgctt tctgcaagaa taattaatgg
     9121 ctttccggcg tcgcaatcat gcgtttcagc cacggcacca tcaacagcat cactactgca
     9181 acgcccagcg tgaccagacc aatcttacca aacacgttgg tatagacggg caacgtctca
     9241 agcggatcgg taatgttgtc cggcaccgcg gtaaatgttg ccacatagcc gcccagcaag
     9301 aacgcggcag cctgcgtcag gaaccacatc ccgagaataa agcccatcaa atgctgcggc
     9361 accagggcag caatcatcgc caggccaagg gcgctaataa acagttcacc taagctctgg
     9421 aataagtaca ccagcacgat aaaccatggc gatgtcagcc cttgtgcatc cgcaaaccac
     9481 attcccgcag ctgccgccgt caaaaagccc agtgagcaca taaacatgcc gagagtaaat
     9541 ttcatcggca tcgagaggtc tttgcctttg ttacccagat gcgtgtaaat gcctgccagt
     9601 attgggctgg cgagtaccac ccagaacggg ttaagcgcct ggaagctgac cgagttgatg
     9661 gaaaaaccga gaatttcatg atgcacgttg ttgatggcaa agaagttcag cgatgttggc
     9721 atctgggcgt agagaatgta aaacaccacc gcttcgagca tcaggacaaa ggcgacaaac
     9781 attttattgc gcccggtttt atccagcttg aatgcctgac gaaagaagat gatggtgacg
     9841 acgatggaga gaacaatcag caccagattg gcgacttcta cgttgtgcat cagccatgca
     9901 catacgaaga tcatcaccac gctgccaagt aatacgtaca acagtttgct gaagctcatc
     9961 ggcttgaagt cgggttcaga accaatgtct ttcaccattc cacgacaggc gatgtaaacc
    10021 agtaatgcga taattaaccc cgccccgcac aggttgtagg tgactgaata accgaatcta
    10081 tcagcgatca caggggccag cgataacgct atcaacgagc cgatattgat cgacatatag
    10141 aacagggtga atgcgccatc aagccgcgga tctttcggcg gatagcactt cgaaagcaag
    10201 ctggctgggt tagctttaaa caggccgtta ccgacagcga tagtccccag ggcgatgaaa
    10261 atcaggtcag gcttaagtag cgacatgccg gtcatgaagt agccaatcgc cagcacaagt
    10321 gctccgagaa caatggtgcg tttggtcccc agcaggtggt cgccgacata gccgccaatg
    10381 gaaatgaggc catagaccag cgcagcaaaa gcaccaaaag tgacaaaagc ctgctcttgc
    10441 gagaatccaa gctgtttaac gaagaaaacc gccagtacgc cctgcacgcc gtagtagccg
    10501 aatcgctccc ataactcgac aaaaaagatc atgaaaaatg ggcgaggttg ctgcagcatc
    10561 cccatgggtg ttgttgtatt catatttatt aaccttccaa taccatcctg aaaagtatga
    10621 acgcgtaagg gataacgcgc gaaaaagttt acatctgtca gagattctta atattgatgc
    10681 ggtgaatgga ttaatacact attacaacag aaaataacca gctaatcaca ctaatgatgg
    10741 aaaatatgat ggtgttaaat gttgtattgg caggagattt tgattgcgta cgcagatcgt
    10801 aggccagata aggggtttac gctgcatcag gtaacaaggc gcgccaaaaa gcaaaacgcc
    10861 cgcatatgcg ggcgttcagg aacacgtcgt ggagggaaga ttattcttct tcgtcgcgca
    10921 gcggaacaat cagcatatca acgtgaacgg tgttgatcag ctgacgtgcg gaagacatca
    10981 gtttgctcca gaagtcctgg tggtgaccac aaaccaccag atccatatcg tatttcttga
    11041 ttgcatcgac cagaacctgg cccaggtcgc cgctgccgct cagggtttca gtgattgggt
    11101 agcctgcatt agtggaaagc tcggtcagcg catgatgtgt ctcttcagag atgcgtttct
    11161 gcatatcacc cagattcaca tcaataagcc cggtgtatag gtcagagtag tttacatcta
    11221 cgtggatcag agaaactttc gcattgtagg ggcgagccat agagactgct ttctctacca
    11281 gaactttgct ttccggggag agatcgaccg cgatgagaat gtgtttataa gccatagtgt
    11341 tactccttcc ataaagttgt cgatgactgg ccagctagcg tttcttgtgc cgttacgtca
    11401 cccgcgtcct gcgaactacg tgcgcggggc taacccagcc gtaaagattc agtgttaaga
    11461 ccatccttac cttatagcga cccggatgat ccgtcaatcc gccttgctta cccgttagat
    11521 aaacaaattt tcgacatgaa tatattgata gtggttaacc ttctggaaaa aaaacaacct
    11581 gatctcctac actatctata gagccgctcg gatgttggtc accacaaaag cggtttctcc
    11641 aggacctggt gttaactgat tggcagcgta tcgggagcgg tagccccggg gtggaactcc
    11701 gcgggcaggt cgccggggag gaggtatgat aagcaccgtc gcattatttt gggctttatg
    11761 tgtcgtttgc attgttaaca tggcgcgcta tttctcatca ctacgcgcgt tgttagtggt
    11821 actgcgtaac tgcgatccat tgctctatca atatgttgat ggagggggct tttttacctc
    11881 acatggccaa cccaacaaac aggtgcgtct cgtttggtat atctatgccc aacgttatcg
    11941 cgatcatcac gatgatgagt ttattcgccg ctgtgagcgg gtgcgtcggc agtttattct
    12001 gactagcgca ttgtgtggtc tggtggtggt cagcctgatt gcattgatga tttggcatta
    12061 agcacttcag caataataac gcataaaaaa agctggccag taaactgacc cgctcgagac
    12121 tgattacaaa cgcaaaattg cctgatgcgc tacgcttatc aggcctgcat aatctctgca
    12181 atctattgaa tttgcatgtt tttgtaggcc gaataaggcg ttcacgccgc atccggcatg
    12241 aacaaagcgc actatgtcac aatctgaagc gggccagctg acccgctcgt tttggtgcgt
    12301 acgattacag gaactgcaag gagagccagt acagcccgcc ggaaagcagt accgcagccg
    12361 gaagggtaaa cacccaggcc atcagaatgc tggtcacggt tttacgctgt aagccgccac
    12421 catctaccac catcgtcccc gcgacagaag aggagagtac gtgagtagtg gaaaccggca
    12481 tcccggtata actcgccagg ccgatagaca ctgccgccgt catctgggca gacatcccct
    12541 gagcgtaggt catgcctttc ttaccgattt tctcaccgat agtcgttgcc acacgacgcc
    12601 agccaatcat cgtaccgata cctaacgcca gcgcgaccgc catgatgatc cacaccggtg
    12661 catactcgat ggtgctaagc atgtcggact tcagtttctt caacaggcgc tgatcgtcag
    12721 cactcacgcc aggtatcttc actactttgt cgatagtgtc agaaacgcac agcataatgc
    12781 ggcgcatctg gctacgttga tcaagcgaca gcttgtcgta gctttccaca tcggtagtta
    12841 acataccttt caggcggttg agcgcgttaa tggtattcga cggatggcaa tggaactccg
    12901 cgggttgcgt tgcgccagct tccggagccg gtactaactg atcagcaccg gtagcctgtt
    12961 tcagcagcgc aggatgctgc tcaaagtaag cttcgacgtt gttgatggca tcacgggtac
    13021 gggtgatttc gtagccagtg gcattcatat tcaccacgaa gcctgctggt gcgacaccaa
    13081 tcaataccaa cataaccaga ccaatgcctt tctgaccatc gttcgcgccg tgcgaaaacg
    13141 ccacgccgat agcggaaagg atcagcgcaa tacgcgtcca gaacggcggc tttttcttgc
    13201 cgtctttctt ttcacgctcc gctggggtca ggtggatacg ggcgcgtttc ttggtgccgc
    13261 tccagtagcg acgcagcaag aaaatcagac cgccagcaaa caccaggccg acaatagggg
    13321 aaacaatcag agaaccgaaa atacttaata ctttcgggat attgagtgca tccaccactg
    13381 acgtcccggt catcaacgca ttggttaaac caatcccgat gatcgcgcca atcagtgtat
    13441 gagagctgga tgcaggtaaa ccaaagtacc aggtacccag gttccagata atcgccgcca
    13501 gcaacataga gaacaccatg gcaaggccat gagacgatcc catattaagc agcagatccg
    13561 tcggcagcat atgcacaatg gcataggcaa cactcagacc acccagcaaa acacccaaaa
    13621 agttgaacac cgccgccata accacggcga gctgagaacg catcgcgcgg gtatagataa
    13681 cggttgccac ggcgttggct gtgtcatgga aaccattgat ggcttcgtag aacagcacaa
    13741 aagccagtgc aagcaataat aacagcccgg tatgcaaatc caggccagca aacaaatgta
    13801 gcataggacg ttacgccatt ttgaggacat gaacgcggcg cattatcagt gactttcgcg
    13861 gcgcgggcaa agtgaaatat agactttttt tgatttgcct cctgtatgga tttcactcaa
    13921 aaaataatta tcttatataa ttcaggcaaa tacttccttt tagtaatatt gatgctggtg
    13981 tgaccactga ggaatcttta caattcacgc ccgttttttc taagaggagc gcaacgtgga
    14041 aaggtttgat gccattatta taggcgctgg tgcggcgggt atgttctgtt ctgcgctggc
    14101 aggtcaggca ggacgccggg ttctgctgat cgataatggt aaaaaaccag ggcgcaaaat
    14161 ccttatgtct ggcggtgggc gctgcaactt taccaacctt tatgtcgaac caggcgctta
    14221 tctgagccag aatccgcatt tttgtaagtc tgcactcgcg cgttttaccc agtgggattt
    14281 cattgatctg gtcaataaac acggcatcgc ctggcacgag aaaacgttag gacaactctt
    14341 ctgcgatgac tccgcgcagc agattgtcga catgctggtg gatgagtgcg agaagggcaa
    14401 tgtaaccttc agattgcgta gcgaagtgct gagtgtggcg aaggatgaaa caggcttcac
    14461 gcttgaactg aacggcatga ctgtcggttg cgaaaagctg gtcatcgcga ccggtgggct
    14521 gtcaatgccg gggctgggcg catcgccgtt tggttataag attgccgaac aatttggcct
    14581 caacgtgctg ccgacccgtg cgggtctggt gccattcact ctgcataaac cgttgctcga
    14641 agagttacag gtgctggcgg gcgtggcggt gccttccgtg attaccgctg aaaacggcac
    14701 cgttttccgt gagaacttac tcttcaccca ccgcggctta tctggaccgg cggtgttgca
    14761 gatttccagc tactggcaac cgggtgaatt tgtcagtatc aatctgctac cggatgtgga
    14821 cctcgaaacc ttcctgaatg agcagcgtaa cgcacatccg aatcagagcc tgaaaaacac
    14881 actggcggtt catctaccga agcggttggt tgaacgctta cagcaactcg ggcaaatccc
    14941 ggatgtttcg ctaaaacagc tcaacgtgcg tgaccaacag gcactgatta gcacattgac
    15001 cgactggcgc gtacaaccca acggcactga aggctatcgc actgccgaag tgacgctcgg
    15061 cggcgtggac accaacgaac tctcttcacg gacgatggaa gcgcgcaaag tgcctgggct
    15121 gtacttcatc ggcgaagtga tggacgttac cggctggctg gggggctata acttccagtg
    15181 ggcgtggtcg agtgcgtggg cttgtgcgca ggatttgatt gcagcgaagt cgtcctgacc
    15241 tgttacctaa agatgaaaat tattagagcc gcattaaaaa tgagctaatt ttgatagtgg
    15301 ctatcttgtg attattttct aatgagcccg tgaactgaaa ccctccaggc ttaatataag
    15361 gtggaaggaa agatgattga aaactcaccc agtggccaga tctttataaa atatgaacag
    15421 gctgaaaaag acagtaactt tgttgttttt tatccttaac cactatgcat taatgctgcg
    15481 ttatttcatg atgcctaaga aaaaccagcg ttacgcaaat ggtcaacgct ggttttatcc
    15541 ggtacgttgc aattattttt tagcagaacc tgcttctaat attgaaacga ttgagaacaa
    15601 cgtaaagcat accgctccca aaccgaccaa aacccgcgaa ggaataaaat atcccatgtc
    15661 ggtctgcgcc atttccgcaa gaaacgatgc caggaaaagg caaaacaggc aggtgaagac
    15721 gggaatcatc ggtattctgt tggctaacga acaggtacgt ctccatacca gtgccagtag
    15781 ccagactttt gagaatatgc tgtaacagat cattccgagg taaataagaa taatgccggg
    15841 agccagtcgg gcgcttgcat cggaactgac taagacgtat atcccctgca gtaccgtgat
    15901 tgagccgaga aaaataaccc aataacacca cagccagtgt tctttagttg aaaacgtatt
    15961 acgtgtttga tggacaattg tggcaacaag gccaattaga caggcacaga ttgcggttaa
    16021 cccaagcaat acgtgacccg cgacataatg cggagttatg tcagcactac gtaacagcgt
    16081 aatagaccaa atgaaaccga gcagggtgag taaaacggga acggcaatga ggcagttacc
    16141 gattaatgaa gaataagcct gtaccggtgt tccgtcgctc ttgctccccg ctgcattttt
    16201 gggaatgagc agaaagtgac cggacgacgc tgccaccgtc gatacacatg cggcaatcat
    16261 accaatgccg aaaataacat agccggcgac aaactcgtct gccatcacat cattgcctgc
    16321 taacagtgcc caaccccata tcatggtgat aattgaccct gcatagccaa taatggggaa
    16381 caatatattg taaaacgtat taacgccgcg cgtgagctgc gaaatgataa taaatgcggt
    16441 agtgaataat gccaggcata tggctgccag agaaatcagc acatgacccg cgacgaaata
    16501 ctcgctttgc cctgaacttt ccagcacaaa gccacctaac gcgatacaaa ttaagcccat
    16561 aatcaaaggg attaatttga aaagccaccc gatatatatg ttcactttaa a
//
LOCUS       DAJVUK010000092        16572 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.092, whole genome shotgun sequence.
ACCESSION   DAJVUK010000092 DAJVUK010000000
VERSION     DAJVUK010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16572
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.092"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..2017
                     /gene="fhuE"
                     /locus_tag="OQQ57_002680"
     CDS             <1..2017
                     /gene="fhuE"
                     /locus_tag="OQQ57_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HCS1957389.1"
                     /translation="DYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM
                     ENTLEISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV
                     VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG
                     KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG
                     GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVE
                     FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL
                     FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT
                     HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST
                     YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQ
                     STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN
                     PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF
                     TRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF"
     gene            complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="OQQ57_002681"
     CDS             complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="OQQ57_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HCS1957390.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMHDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(3805..4602)
                     /locus_tag="OQQ57_002682"
     CDS             complement(3805..4602)
                     /locus_tag="OQQ57_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1957391.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(4613..5617)
                     /gene="holB"
                     /locus_tag="OQQ57_002683"
     CDS             complement(4613..5617)
                     /gene="holB"
                     /locus_tag="OQQ57_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HCS1957392.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYTVTWLSREVTMSQDALLAALRLSAGSPSAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(5614..6255)
                     /locus_tag="OQQ57_002684"
     CDS             complement(5614..6255)
                     /locus_tag="OQQ57_002684"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HCS1957393.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="OQQ57_002685"
     CDS             complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="OQQ57_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HCS1957394.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="OQQ57_002686"
     CDS             complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="OQQ57_002686"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HCS1957395.1"
                     /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ
                     RLQDACQRLMIFCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSVTVYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVSFSSATLYEYLAPLCERPN"
     gene            complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="OQQ57_002687"
     CDS             complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="OQQ57_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HCS1957396.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKAIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNLDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="OQQ57_002688"
     CDS             complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="OQQ57_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCS1957397.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="OQQ57_002689"
     CDS             complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="OQQ57_002689"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HCS1957398.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="OQQ57_002690"
     CDS             complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="OQQ57_002690"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HCS1957399.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(11667..12620)
                     /gene="fabH"
                     /locus_tag="OQQ57_002691"
     CDS             complement(11667..12620)
                     /gene="fabH"
                     /locus_tag="OQQ57_002691"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HCS1957400.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVANQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="OQQ57_002692"
     CDS             complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="OQQ57_002692"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HCS1957401.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRMALELVKEGRAQAC
                     VSAGNTGALMGLAKLLLRPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="OQQ57_002693"
     CDS             complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="OQQ57_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HCS1957402.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="OQQ57_002694"
     CDS             complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="OQQ57_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HCS1957403.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQK
                     PNPFAVLASLKRK"
     gene            14784..15368
                     /gene="yceF"
                     /locus_tag="OQQ57_002695"
     CDS             14784..15368
                     /gene="yceF"
                     /locus_tag="OQQ57_002695"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HCS1957404.1"
                     /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL
                     VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF
                     YTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL
                     FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
     gene            complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="OQQ57_002696"
     CDS             complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="OQQ57_002696"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HCS1957405.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRSQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
BASE COUNT         4104 a         4507 c         4001 g         3960 t
ORIGIN      
        1 tgattacagc gtaacgtcta cctctgcggg taccaaaatg cagatgactc aacgtgatat
       61 tcctcagtcg gtcactattg ttagccagca gcggatggaa gatcagcagt tacaaacgct
      121 gggcgaagtg atggaaaaca cgctggagat cagcaaaagt caggcggatt ccgatcgtgc
      181 tctttattat tcccgcggat tccagatcga taactatatg gttgatggta tccccaccta
      241 ttttgaatcg cgctggaatc tgggcgatgc actttctgat atggcactgt ttgaacgcgt
      301 agaagtagtg cgtggcgcga caggactcat gaccgggacg ggtaatccat ctgcggcaat
      361 tgatatggtt cgaaaacacg cgaccagtcg tgaatttaaa ggcgatgtct cggcggaata
      421 cggtagctgg aacaaagaac ggtatgtggc ggatttacaa agcccactca ccgaagacgg
      481 taaaatccgc gcgcgaattg tcggcggcta ccagaataac gactcatggc tggaccgcta
      541 caacagtgaa aagaccttct tctccggcat tgtcgatgct gatttaggcg atcttacgac
      601 gctttcagcc ggttacgaat atcagcgcat tgatgttaat agccctacct ggggcggttt
      661 accgcgctgg aatactgatg gcagcagcaa cagttacgat cgtgcacgca gtaccgcacc
      721 tgactgggcg tacaacgata aagagatcaa caaggtcttt atgaccctga agcagcggtt
      781 tgctgatacc tggcaagcga cactgaatgc cacccactct gaagtcgaat ttgacagcaa
      841 aatgatgtat gtcgatgcct atgtaaacaa agcggatggt atgctggttg ggccatacag
      901 taattatgga cctggctttg attatgtcgg cggcaccggt tggaacagtg gcaaacgtaa
      961 agttgatgcg ctagatttgt tcgctgacgg tagttatgaa ttgtttggtc gtcagcacaa
     1021 tctaatgttt ggtggcagtt acagcaaaca aaacaatcgt tacttcagtt catgggccaa
     1081 catcttcccg gatgaaattg gcagtttcta caactttaat ggcaatttcc cacaaaccga
     1141 ctggtcacca cagagcctgg cacaggacga taccacacat atgaaatcgt tatatgctgc
     1201 cactcgagtc acccttgccg atccgctgca tctgatcctc ggcgcacgct ataccaactg
     1261 gcgggttgat acgctgactt acagcatgga gaaaaaccac accacgcctt acgctggtct
     1321 ggtgtttgac atcaatgaca actggtcgac ctacgccagc tatacctcta ttttccagcc
     1381 gcaaaatgat cgtgacagtt caggcaaata tctggctcca atcaccggta acaactacga
     1441 gctgggtctg aaatcgggct ggatgaatag ccgtctgacc accacgttag ccatcttccg
     1501 tattgagcag gataatgtcg ctcagtccac cggtacacct atccccggca gcaacggcga
     1561 aaccgcctat aaagcggtgg atgggacagt cagtaaaggg gtggaatttg aactcaacgg
     1621 cgcaattacc gacaactggc agctgacatt tggcgcaacg cgctatattg cagaggataa
     1681 cgaaggaaac gccgttaatc ctaatctgcc acgcaccacg gttaaaatgt tcaccagcta
     1741 tcggttgcct gtcatgccag agttgacagt cggcggtggt gtgaactggc aaaatcgcgt
     1801 gtataccgac accgtgacac cgtatggcac cttccgcgcc gagcaaggta gctacgcgct
     1861 ggtggatctc ttcacccgct accaggtgac gaaaaacttc tcgttacagg ggaacgtcaa
     1921 taacctgttc gacaaaacct acgataccaa catggaaggt tctatcgtct acggcgcacc
     1981 gcgtaatttc agcattaccg gcacgtatca attctgaata acacctgtaa aaaaggcagc
     2041 catctggctg ccttagtctc cccaacgtct tacggattag tggttacgga tgtactcatc
     2101 catctcggtt ttcaggttat cggatttagt accgaaaatc gcctgaacac cagaacccgc
     2161 aaccactacg cccgctgcgc ccagtttctt caggccagcc tgatccactt tagacacatc
     2221 agcaacgctg acgcgcagac gggtaataca tgcgtcgagg ttagtaatgt tttctttacc
     2281 accaaatgca gcaaccagag ccggtgccat ttcgctggta cctgttgctt ttgcatcttc
     2341 agtcgcgtct tcacgacccg gcgttttcag atccagtgct ttaatcagca cgcggaagat
     2401 ggtgtagtaa acaatcgcat aaccgatacc gacgatcggg aacagccaca gtttgctgct
     2461 gttaccagac agaacgataa agtcgatcag accgtgcgag aacgacgtac cgtcatgcat
     2521 ccccagaaga atacagattg ggaatgccag gcctgccaga atcgcgtgga tgatgtacag
     2581 gatcggcgca acgaacatga aggagaactc gatcggctcg gtgataccgg tcaggaacga
     2641 ggtcagcgcc gcggagatca taataccgcc cactttcgcg cggttttctg gtttagcaga
     2701 gtgccagata gcaattgcgg cagctggcag accgtacatt ttgaacagga agccaccaga
     2761 cagtttaccc gcagtcgggt cacccgccat ataacgcgga atgtcgccgt ggaaaacctg
     2821 acctgctgcg ttggtgtatt caccaatctg catctggaaa ggtacgttcc agatgtggtg
     2881 cagaccaaac ggtaccaggc aacgttcgat gaaaccgtaa atgccaaacg caactaccgg
     2941 gttctggtaa gcagcccact gagagaaggt ctggattgca gaaccaatcg gcggccaaat
     3001 gaaggacagc acaacgccag taaagatggc agccaggcca gaaatgatcg gcacaaagcg
     3061 tttaccggca aagaagccaa gatactcagg cagcttaata cggtagaaac ggttaaacat
     3121 gtacgctgcg atcgcaccgg agataatccc tccgagtacg ccagtatccg ccaggtgttt
     3181 agaggcgatt tcttcagcag gtaaatgcag taccagtggc gcaaccacgg ccatggtttt
     3241 aaccatgatg ccataggcaa caactgcggc cagcgcggat acgccatcgt tattggtaaa
     3301 gccgagggcg acaccgatcg caaaaatcag tggcatgttt gcaaagacgg aaccgcctgc
     3361 ttctgccata acatgcgata caacggcggg cagccagctg aaattcgcgg aaccgacgcc
     3421 cagcagaata cctgcgatag gtagtacgga taccggcagc atcagcgatt taccgacctt
     3481 ttgcaggtta gcaaatgcat tcttaaacat aattgagagt gctcctgagt atgggtgctt
     3541 tttttacgtt ctcacgcgtg gcaagggggg agagcctcgc cgtgtacagg gcatctaagc
     3601 gccctttatt tattacacag agtaaaataa ttcagtgcca atttgtttga cggctatcac
     3661 gtttcaactt cagatcattg gagaagttgc acattttgac aaaacatatg tcacaatatt
     3721 tcaaacgcgg ttattcaccg cccaattttc ggcggtgaac tttactcgtt ttagccatta
     3781 attacgagct ttaaaaaaac tcattcaacg gatggattga aggcgggaag cgtcgatgtg
     3841 aaacagacgg gcgaagttat cggtggttac ctgcgccagt tcttcaacgg caacaccttt
     3901 caacacagcc atgtattctg caacgtcacg aaccatcgca ggttgattct cttttcctcg
     3961 atgcggtacc ggcgcaaggt aaggtgagtc agtttccacc agtaatcgat ccagggggac
     4021 ataacgcgca gcatcgcgca gttgctccgc attacggaag gtcacaatgc cggaaaagga
     4081 gatgtaaaat ccgagatcca gtaatttacc cgccgtttct ctgtcctctg taaaacagtg
     4141 tagtacgcca ccgcaatccg tcactttttc ttcgcgcaga attgccagcg tatcggcacg
     4201 ggcgtcacgg gtatggacga taaccggctt gttcagttca cgaccaatct ggatatgatg
     4261 gatgaaggac tcttgctgac gtactttagt ttccggtgtg taataataat ccagcccggt
     4321 ttcacccagc gctacaacac cctcttctgc cgccagacgg cgtaaatctt ctacatcgta
     4381 gggatcattc tggttgagtg gatgcacgcc acaagaaaat acgacgttgt cacgttcgcc
     4441 taccagatcc cgcatatgta aataacccgg taatgttgtg gcgactgcca gacaaaattt
     4501 cacatcgcgt gcggcggctt tcgccagaac gtcatccacg tccttatgca aagattcata
     4561 atccagacca tcgagatggc agtgtgagtc gactaaaaac atgatgtctc tcttaaagat
     4621 gaggaaccgg tagcacaacg cccggttgca ggtaatgctc aatacgcagt aaaagatcgg
     4681 tgatgagaag ctcgcggttg atgcctgtga cagacattaa ctgttcacga atgtggcaaa
     4741 catcccccag tatagcctgc aggcgcgagg gagaaagatg gtttgccagt tcggcgacca
     4801 ggcccggcac atcaacattg gtcacctgtg cagcgccatg atggcgtttt agcgcatcca
     4861 tcagcaacgt tgccagccag tgtaaacgcg ccggagcttg ttcatgatta agggccgcca
     4921 gcagcgaata ccagtcgccc gatggtacgc tatatgccaa cgcctgacac aatgtttcac
     4981 gagcctgcca gttatctccc tgaaacaacg ccagtgccgc gctaggcgaa ccggcactta
     5041 agcgcaatgc ggcaagtaat gcatcctgtg acattgtcac ttcgcgtgaa agccaggtca
     5101 cggtgtactg ttccggcggc ggcgcaaggt aatgtaaccg acaacgacta cgtaatgttg
     5161 ccagtaaacg ttcaggctcg cgggtagcca ggaaaaacca ggtttctgct ggtggctctt
     5221 caagcgtttt cagcaatgcg ttagccgcgg cgtcggtcag taaggcagca tcggttaccc
     5281 agacaacttt cgcaccacct aggcgtgcgt gctcattcag cttttcggtg acctcacgta
     5341 ccgcatcaat gcccagcgta tttttccctt tttcgggagc cagggtgtag taatcgggat
     5401 gcgtgccagc ctgcatcaac tgacatccac gacagtgacc gcaacttttg tggccctgcg
     5461 gttgttggca gagtaaataa cggctcaggg cgtagattaa agcatcatcg cccatgcccg
     5521 gtaacgcctg aatgagtagc gcatggtgac ctcttccggc ctgatagctg gctaccagtt
     5581 tttcgaaatc aggtcgtaac catggatacc atctcatgcg tccaactcct tcacccagtg
     5641 ggtcacggta gtacggattg catccatcac ggcctccagc ggctgggtgg catcaatggt
     5701 atgaatactt ttatcttgtg cagccagttc cagatagcgg gcgcgggtgc gattaaagaa
     5761 atcgaaagac tcttgctcaa tacgatccag ctcgccgcgc gcacgcgcgc gttttaagcc
     5821 aacttccggg gtaacatcga gatagagcgt taagtcaggg cgaaaatccc cgagaacagc
     5881 atcacgcagt gttgccagca tatgttggtc aataccacgt cctccgccct gatacgcctg
     5941 agtggagaga tcgtggcgat cgccaatcac ccaggtgccg ttagccagag ctggtttgat
     6001 gaccgtttct accagttgaa cgcgcgcggc ataaaacatc agaacttcgg ctttatcggt
     6061 aatgacttca tcgcctaccg atttgatatc cagcaccagg cttcttaact tttcggcaag
     6121 ttgcgtaccg ccaggttccc gagtgaaaac catgtcgcgg atacccagtt gctcaagcgt
     6181 ctcaaccacc acattacgcg cggtagtttt gcctgcgcct tccagcccct caatgacgat
     6241 atacttactg cgcatttttt tccttaagca ctttcagata atcctgcaca gacttgttat
     6301 ggctggcaag attggtatta aacgtgtgac cacctttacc atcggccaca aaatagagat
     6361 acggcgtttt tgccggatgc gcagcagcct tcagcgaatc cgcccccggc gtagctatcg
     6421 cacctggagg caaaccggta atggtatagg tgttatacgc tgtcggcgtt tccaggtctg
     6481 cacgagaaag tttgccatta taacgctctc ccatcccgta aatcacggtt gggtcggtct
     6541 gcaggcgcat accaatgcgt aaacggttga taaataccga ggcaacctga tcgcgttcac
     6601 tggcaacggc ggtttctttt tcgataattg atgccatcgt caccagctgg tttttatctt
     6661 tataaggcag accgtccgca cgcccttccc aggcgctatc gaccgctttc accattttct
     6721 tgtgcgctcg cttgagtaac gcgacatcgg tggtattggc ggtatacatc caggtgtctg
     6781 gccagaacca accttcaatc cactccgggt tttccagttc aagtgcctgc gctacggtgg
     6841 cgtacttatc gtcactcagc gtgtgcttga tatacggagc ctcacgcaat tgcttgaggt
     6901 agtcgctcag acgcatccct tctaccagtc gcagcgggaa ctgtgcttct ttaccgcttt
     6961 ccagcaattt cagcatctcg cgcacggtca tctgcggtgt aaagcggtaa gtcccggctt
     7021 taaagtgaga aagatccggt tcgatacgca gcaaccattg aaaaacccgt gggcgattga
     7081 tgatcttatc ggcataaagc tgttcaccaa gcgccagacg tccggtccct ggcttcaggg
     7141 taaatatcgt ctcttctttg ataagcaatt tgctgtcggc aagatggcga accttccaga
     7201 cgcccacacc agcggcgata cccagtacca ccagcaataa caagataatc aataacactt
     7261 ttttcatgac taattcgggc gctcacaaag tggggctaaa tattcatata acgttgctga
     7321 cgaaaaggag acatcgccac aggcacgtac gggcatcact ggcattaacg cattacaaat
     7381 aaccatctca tctgcctgca acgcctcttc cagagaggct tgcacttcga caagctgata
     7441 agaggattgt gccagcaaac ggatacagaa ttgtcgcata atgccgttaa cacctgcctg
     7501 atccagtcgc ggcgtataaa ctacattgcc cttccgccag aacaaattag ccgcacagca
     7561 ttccgtaacc cacccttcgc tgtcaaggac cagcgcctca tcagcgtttg tctgctcaag
     7621 atgagagcgg atcaatactt gctcaagccg attaagatgt ttaatacctg caagatgggg
     7681 attgcgcccc agccgcaccg ggcttagcgc caacgtcatc ccttcgttac gcaaacggtc
     7741 gtaatgtgca ggataaaccg taacggagag aatccgcgtt gccggtccac tgttcaatgt
     7801 gctgtaccct cgcccgccac taccgcgact gatcacgact ttcagcacac cattttgctg
     7861 ttctgctgcc agcgttttca tctcttgttc aagctgaggc cagaagtcac agaaaatcat
     7921 caaccgctga caagcatcct gtagtcgctg gatatgcgcc gataacaaac tgactttacc
     7981 gtcgataact ctggcggtgg taaaacaacc atcaccaaac tgcgttgccc gatcgcttac
     8041 tgccagcgat tcctgcttat gaccgttaat taagaacata ccggctcctt atcagagaat
     8101 tgttagtgtg gcagcatgct cactacggaa caagtcggaa taaaagctaa gaaaaaaggc
     8161 ccgcaagcgg accttttata tgggtgggaa atgacaactt agatcttttt aaagatcaaa
     8221 gaaccattag tgccaccgaa gccgaaggag ttacacagcg tgtattccat tccgctgacc
     8281 tgacgtgctt catgcggtac gaaatccaga tcgcaacctt catccaggtt atccaggttg
     8341 atggttggcg gaacagcctg atcgcgcagc gccaggatgg agtagataga ctctactgcc
     8401 cccgccgcac ctaacaggtg accggtcata gatttcgtgg agcttaccaa cacacggctt
     8461 gcagcttcac cgaagatggc tttcaccgcc tgcgcttcag ctttatcgcc agccggcgta
     8521 gaagtaccgt gcgcgttaac gtagccaatc tgactcgctt caatgcctgc atcacgcaga
     8581 gcatttgcca ttgccagagc tgcgcctgcg ccattttctg gcggtgacgt catatgataa
     8641 gcatcgctgc tcataccaaa gccgacgagt tcagcgtaaa ttttcgcacc gcgttttttc
     8701 gcgtgttcgt actcttctag taccagcata ccggcaccat cgcccagtac gaagccatca
     8761 cgctctttat cccacgggcg gctcgccgct tgcgggttat cattgcgggt agataatgca
     8821 cgtgccgcgc caaaaccacc aacgcccagc ggcgtactgg ctttctctgc gccacctgca
     8881 accatcacgt cagcatcgcc atacgcgata atacgcgcag catgaccaat gttgtgcacg
     8941 ccggaagtac aggcggtcgc gatagagatg cttgggccac gcaggccata catgatagtc
     9001 agatgacctg ccaccatgtt cacaatcgtt gacggaacga agaatgggct gatcttacgt
     9061 ggaccaccgt tcatcagaga tgtgtggttt tcttcgatca gtccgaggcc gccaatcccg
     9121 gagccaattg cggcaccaat gcgggttgcg ttctcttccg ttatttcaag gccagaatcc
     9181 tgcatggcct gaacgccagc gacaattcca tattgaatga aggcatccat cttgcgctgt
     9241 tctttgcgcg agataatgtc ctcacagtta aaatccttta ctaagccagc aaatttcgtt
     9301 gcataggcgc tagtatcgaa atggtcgatt aggctgatgc cactctgacc ggcaagcaga
     9361 gctttccagg tagactctac ggtattgccg acaggagaca acatgcccag tccggtcaca
     9421 actacacgac gcttagacac gtttgtcctc cagggaggga aaaaatgatt ctagtgggac
     9481 aaaaagataa aactcaggcg gtcgaacgac cgcctggaga tgttcactta cgcctggtgg
     9541 ccgttgatgt aatcaatggc agcctgaacg gtggtgattt tctcagcttc ttcgtccgga
     9601 atctcagtat caaactcttc ttccagagcc attaccagct caacggtgtc aagagaatcc
     9661 gcgcccaggt cttcaacgaa agaagcattg ttggtaactt cttcctgctt aacgcccagc
     9721 tgttcgccga taattttctt aacgcgttct tcgatagtgc tcatactctt aaatttccta
     9781 tcaaaactcg ctttcgcgat ggttttcgta gtgtataaaa tgttgaaaaa tttgcaacta
     9841 aatcccggca ggtcttacca cgattttacg ttattttgag gccttacccc ccaataacgc
     9901 aaatcatttt gcactaatta ttactcataa ccacgcagac tgcgcgcaac atgagcattt
     9961 tgtgcaaatc gcggtcagac catgtacatc ccgccgttca catgcaaagt ttcacccgtg
    10021 atgtaagctg cttcgtcgga tgccaggaat gcaaccgcgt tggcgatttc ctgtgcgccg
    10081 ccgaggcgac ccgcaggaac ctgcgccagg atacccgcac gctggtcatc gctcagcgca
    10141 cgtgtcatgt ccgtttcaat aaagcccgga gcaacaacgt ttacagtaat accgcgtgac
    10201 gcaacttcgc gcgccagtga tttactgaag ccgatcaagc ccgctttcgc cgcagcgtag
    10261 ttggcctgac cgccatttcc catggtacca accacagaac cgatagtgat aatacgacca
    10321 tgacgctttt tcatcatagc gcgcattacc gcttttgaca gacggaaaac agatgaaagg
    10381 ttggtttcga taatatcgtt ccactcttca tctttcattc gcattaacag gttatcacga
    10441 gtgataccgg cattattgac caggatatcc acttcaccaa attctgcgcg aattttttcc
    10501 agaacagatt cgatagatgc cgggtcggtc acattcaaca tcagaccttt gccgttagca
    10561 cctaaataat cactgatcgc ctgagcgcca ttttcactgg tcgcagtgcc aataactttc
    10621 gcgccacggg ctgcgagcgt ttcagcaatt gcgcggccaa ttccgcggct tgcaccggtt
    10681 accagtgcga tttttccttc aaaattcatg attttcctct tttaaagctc gagcgccgct
    10741 gccatcgctg aaggttcgtt cagcgccgag gcggtcaggg tgtcgacaat gcgtttcgtc
    10801 aggccagtta gcactttgcc cgggccgact tcatagagat gttctacgcc ttgcgctgcc
    10861 atgtactcaa cagacttcgt ccactgaacc gggttataca actgacgtac cagtgcgtca
    10921 cgaatggcat caccattggt ttcgcatttc acatcaacgt tattcacaac aggaactgtt
    10981 ggtgcgttaa aggtgatttt cgctaattct actgccagtt tgtcggctgc tggtttcatc
    11041 agcgcacagt gagacggtac gctcactggt aacggcagcg cgcgttttgc gcccgcagct
    11101 ttacaggcag cgccagcacg ctcaaccgcc tctttatgac cggcaataac cacctgtccc
    11161 ggagagttaa agtttaccgg agaaacgacc tgaccttctg cagcttcttc acacgctttc
    11221 gcaatagacg catcatccag accgatgatt gccgccatag cgcccgtgcc ttctggtacg
    11281 gcttcttgca tgaacttgcc gcgcatctca accagacgca ccgcatcagc gaaatcaatc
    11341 acgccagcgc aaaccaacgc ggagtattcc cccaggctgt gaccggccat cattgccggt
    11401 gctttaccgc cctgctgctg ccatacgcga tacagcgcaa cagatgcagt caacagcgct
    11461 ggctgggttt gccaggtttt attcagttct tcagctggcc cctgctgggt cagcgcccac
    11521 aggtcgtagc ccagcgccgc agaagcttca gcaaacgttt cttcgacaat tggatagctc
    11581 gccgccatat cagccagcat tccaacggtt tgagaaccct gtccagggaa cacaaatgca
    11641 aattgcgtca tgttttaatc cttatcctag aaacgaacca gcgcggagcc ccaggtgaat
    11701 ccaccgccaa aggcttcaag cagaaccaac tgccccggct taatgcgccc gtcgcgtaca
    11761 gcttcatcca gcgcgcacgg gacagaggcc gcagaggtat taccgtggcg atccaacgtc
    11821 accacgacat tgtccataga cataccgagt tttttcgccg ttgcactgat aatacgcagg
    11881 ttagcctgat gcggaaccag ccagtccagt tgagaacggt caagattatt cgccgccagc
    11941 gtctcatcaa cgatgtgcgc cagttccgtt accgcaacct tgaagacttc gttgcccgcc
    12001 atcgtcagat gaattgaatt ctctggattc acgcggtcgg cgtttggcag cgtcagcaat
    12061 tcaccataac taccgtcggc atgcagatgg gtggagatga ttcccggctc ttcagaggca
    12121 gccagcaccg cagcgcccgc gccatcgcca aaaataataa tagtcccacg atctgttgga
    12181 tcgcaggtgc gcgccagtac atcggaaccg acgaccagag catacttcac cgccccagat
    12241 ttcacgtatt gattggctac gcttaatgca taggtgaaac ctgcgcaggc tgctgcaacg
    12301 tcaaatgccg ggcaaccttt aatgcccaac atgctttgaa tctgacaagc tgcgctcggg
    12361 aaagcgtgcg tagcagaagt cgttgccaca acgatcaggc caatctggtc tttctcaatg
    12421 cccgccatct caattgcgcg tgtcgccgct tcaaagccca tggttgaaac ggtttcgttt
    12481 ggcgcggcaa tgtggcgttc gcggataccg gtacgagtga caatccactc gtcagaggtg
    12541 tccaccattt tttccaaatc ggcgtttgtc cgcacttgtt cgggcagata gctgccagta
    12601 ccaataatct tcgtatacat gtacgctcag tcacttttcg gttatatacc gtcacttgca
    12661 aactgcgagt tcgctggcag cgtcctgcta ccgcagagtt ccgcttttgc caccgtccag
    12721 cagctcaaaa ccagctgggt atacagattc caggcgagcg gcaattcgct gaggaacttg
    12781 tcgctgcacc gcctgcactg cctgttcaat cgcgaccgca aaagctcgct gattggctgc
    12841 accatgactt tttatcaccg tgccgcgcaa tcctaacaga caggcgccgt tatactggtc
    12901 ggggttgagg tgactgaatc gcctcgtcag gctcttttgt agccaacgct ttaataacag
    12961 tagccaccac gaccgttttt tcccttcacc ctgagatttc agcagagaaa ggaacatcct
    13021 gacaacacct tccatcgtct ttaacgtgac atttcctgta aagccgtcac aaaccagcac
    13081 atctgtcttg ccagttaaca actcattggc ttcaagatag ccgatataat tgatagaagg
    13141 gattgtttta agcaccgctg aggcatcccg aatactgtcg agacccttta cttcttcttc
    13201 accaatattg agcaacgcca cgcgaggatt gggaatttcc accacctctt cagccagaac
    13261 tgagcccata atggcaaatt gcaccaacat tgtgctgtca caatcgacgt tggcccctaa
    13321 atcgaggacc accgttttgc ccttttgctg atgtggtaat accgtcacca gcgccggacg
    13381 ctcaatcccc tccaggggcc tgagtaataa ttttgccagc cccatcagtg ccccggtatt
    13441 accggcactg acacaggctt gcgctcgacc ttctttcacc agctccaggg ccatacgcat
    13501 tgaactccca cgactagcgc ggatagcttg cgaaggccgg gcatcactgg cgataactga
    13561 ctgcgcagga ataatctgca gacgcgaacg ttgttcaaag tcagctttag caagtaatgg
    13621 cgtgatggcg tcgggattgc cgactaaaag aagagtgagt tgcgaattag aattcagtgc
    13681 ctgcaatgct gcaggcactg tcacggaagg gccaaaatcc cctcccatga catctaacgc
    13741 cagggttaga cgtgtcaagg tatcgtcgcc gcccggtttg gtctttcccc agttgcctgg
    13801 ggaaaatcct cactaagctt catcacgcag acgcgtgatt acttagcgat gaccttgcgg
    13861 ccgcggtagt aaccgtcggc agtgatatgg tgacgcaggt gtttttcacc agaagttttg
    13921 tctacagaca ggctggtgac tgcggtcagc gcgtcatggg aacgacgcat gccacgtttg
    13981 gaacgggttg gtttattctg ttgtacggcc atggacctta ctcctcaatt acggtttatc
    14041 cccgatccaa cggggagcac caattactta cgctttaagc tggctaatac ggcaaatggg
    14101 tttggctttt gcacttcttc aggcagttca ccaaagacca tgtccgcttc ggacacttca
    14161 cagtgttcag aatcatgcac cggaactacc ggcaaggcga ggatgatttc atcttcaacc
    14221 attgcaagca gatcgatttc accgaattcg ttaacctcaa tcggttcata cgcttccggc
    14281 agtgcttcag cctgttcgtc tgaacgcaca ggactaaaac aatacgttgt gtagacctga
    14341 tgagtaaacg gcttcccgca acgctgacac tcgagcgtta ccgtcacctt cgcatcgccg
    14401 tttaacactg cgagacgttg gttatcgata gcgaacgaca tggagcattc cacatcactg
    14461 tccacactga ctacggattc ggcgacgcgc tcaacctgat caggggtata gataccctgg
    14521 taatcaaggc gtttttgagc cgtacgaacc ggatcgagag tcaggggtaa ttttaccttt
    14581 tgcatagggc gcgcatatta actttgtaac gtcatagagt caaagaaaaa ggcagcctgt
    14641 ggttgccttt tgccaataat tcgcacacat tgcgggttac tgctttattt tcgttcagtg
    14701 ctgataacga acatcaacct gcaaaacgaa gcgcatagtt taaaatggct atcatcaata
    14761 cgctatatct gatggaaaaa aatatgccta aacttatttt agcctccacc tcgccatggc
    14821 gtcgcgctct tctggaaaaa ctgcaaatct cttttgaatg tgcagcacca gaggtcgacg
    14881 aaaccccacg cagcgacgaa tcaccgcgac agttggtgct tcgactggca caagaaaaag
    14941 cgcaatctct ggcgtcacgt tatccggatc atttaattat tggttcagac caggtatgtg
    15001 ttcttgatgg cgaaatcacc ggtaaaccgt taacggaaga aaatgcccgt ctgcaattac
    15061 gcaaagccag cggcaatatc gtcaccttct atactggact ggcgttgttt aattcggcga
    15121 atgggcatct acaaacagaa gtggagcctt ttgacgtcca tttccgtcac ctgtgcgagg
    15181 cggagattga taattacgtg cgtaaggagc atcccctgca ctgcgcgggt agctttaaga
    15241 gtgaaggatt tggcattacg ctgtttgagc gtttagaggg acgtgaccct aacacgctgg
    15301 ttggtttacc gctaatcgcg ctgtgtcaga tgttacgtcg ggaagggaaa aacccgctga
    15361 tgggatagtt gtttgcgccg gatgcggtta cgtcgcatcc ggcaatcggt gcaggcggcc
    15421 tgatgcggcg taaacgcctt atcaggccaa ccgcccatta tcaggcttat atgcttgtat
    15481 tagcgcgcgt tacgcagctt ttgcaaacaa cgcttcaaac cttcatccat cggcgcttcg
    15541 atacgcatca cctcaccggt ccccggatgg gtaaacttca acgctgcggc gtgcaggaac
    15601 agacgattta atcccgtgcc tgcttcagtg agctgtctgt caaattcacg gtcaccgtag
    15661 cgatcgtcaa aggcaatcgg atgacccgca tactgtgtat gcacacggat ctgatgagta
    15721 cgtccggtta ccgggctaca acgcaccagg gtggcaaatg catagcgttc ttccacttta
    15781 aagcgtgttt ccgacggttt gccttcctga ctgacacgca cgatacgttc gccgctttgc
    15841 agaatatttt tcaataacgg cgcttgaacg ctcttcacat gcgactgcca ctgactgcgc
    15901 accagcgcca ggtaatcttt ttgcattcct ttttcacgta attgctcatg cagagaacgc
    15961 aacgccgagc gttttttcgc taccagcaac acacctgaag tgtcccggtc gagacgatga
    16021 accagttcaa ggaaccgcgc ttccgggcgc aacgcccgca aaccttcgat aacgccgaag
    16081 cttaaaccac tgccgccatg taccgccgta ccggaaggtt tattcagcac caggatatga
    16141 tcatcttcat ataagatgac gtccgccagc gccgccacct tttgcagatg tggcgaaacc
    16201 gcctcttctt cccgctcagc aacgcgaacc ggtgggatac gcacctcatc acccgcttcg
    16261 agtttatatt caggcttaat acgttttttg ttcacccgca cttcgccttt acgcaaaata
    16321 cggtaaatca tactttttgg tacgcctttc aattgggtac gcaaaaagtt gtcgatacgt
    16381 tgccccgctt cgtcagcggt gatagcaaca atttttacgg atggagtctc tgttttcatg
    16441 gtgggcgatt ctaattagcc aacaggattc gcgccactca tttttctatg cttatattta
    16501 gttttacacc ttattacttc actacgtgat cactttattg atggttatta aaccaatcac
    16561 cagcaagaag tg
//
LOCUS       DAJVUK010000093        16534 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.093, whole genome shotgun sequence.
ACCESSION   DAJVUK010000093 DAJVUK010000000
VERSION     DAJVUK010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16534
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.093"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(52..216)
                     /locus_tag="OQQ57_002697"
                     /pseudo
     CDS             complement(52..216)
                     /locus_tag="OQQ57_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280578.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
     gene            complement(295..389)
                     /locus_tag="OQQ57_002698"
     tRNA            complement(295..389)
                     /locus_tag="OQQ57_002698"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(353..355),aa:Sec,seq:tca)
     gene            682..2064
                     /locus_tag="OQQ57_002699"
     CDS             682..2064
                     /locus_tag="OQQ57_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HCS1957406.1"
                     /translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMR
                     EDLRDIWQNDQWRIVGLLTIFNILAVCVLGGAMMYYVTWILGTPEVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
                     AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
                     QQFTSQEVQN"
     gene            2074..4365
                     /gene="yicI"
                     /locus_tag="OQQ57_002700"
     CDS             2074..4365
                     /gene="yicI"
                     /locus_tag="OQQ57_002700"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HCS1957407.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAE
                     FKSGNLSARVSKGEFWSLDFLRNGERITGQDTNNQRNYMFERLDLGVGETVYGLGERF
                     TALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQSVSFEVGSEKVSK
                     VQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEAT
                     VNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKIC
                     VWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADK
                     LKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAHIYNELVWNVLKDTVGEE
                     EAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHYIGGFEN
                     TAPAHVYKCWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYR
                     EAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEG
                     RWTHLWHNDELDGRCWHKQQHSFLSLPIYVRDNTLLALGNNDQRPDYAWHEGTAFHLF
                     NLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQD
                     GSQAESEQGLVVKPQGNALTITL"
     gene            complement(4418..6127)
                     /locus_tag="OQQ57_002701"
     CDS             complement(4418..6127)
                     /locus_tag="OQQ57_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HCS1957408.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDAHLQGPDWAVTDLDLS
                     LRNMTFSKDDWQTQEGKLLMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTTLDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPEL
                     PLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSAE
                     LVQ"
     gene            complement(6248..7639)
                     /gene="xanP"
                     /locus_tag="OQQ57_002702"
     CDS             complement(6248..7639)
                     /gene="xanP"
                     /locus_tag="OQQ57_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HCS1957409.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKTWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITSTSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            7919..9124
                     /gene="gltS"
                     /locus_tag="OQQ57_002703"
     CDS             7919..9124
                     /gene="gltS"
                     /locus_tag="OQQ57_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HCS1957410.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            complement(9158..11239)
                     /gene="recG"
                     /locus_tag="OQQ57_002704"
     CDS             complement(9158..11239)
                     /gene="recG"
                     /locus_tag="OQQ57_002704"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HCS1957411.1"
                     /translation="MTGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(11245..11934)
                     /gene="trmH"
                     /locus_tag="OQQ57_002705"
     CDS             complement(11245..11934)
                     /gene="trmH"
                     /locus_tag="OQQ57_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HCS1957412.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(11941..14049)
                     /gene="spoT"
                     /locus_tag="OQQ57_002706"
     CDS             complement(11941..14049)
                     /gene="spoT"
                     /locus_tag="OQQ57_002706"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HCS1957413.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(14068..14343)
                     /gene="rpoZ"
                     /locus_tag="OQQ57_002707"
     CDS             complement(14068..14343)
                     /gene="rpoZ"
                     /locus_tag="OQQ57_002707"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HCS1957414.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(14398..15021)
                     /gene="gmk"
                     /locus_tag="OQQ57_002708"
     CDS             complement(14398..15021)
                     /gene="gmk"
                     /locus_tag="OQQ57_002708"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HCS1957415.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     DEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            15279..>16534
                     /gene="ligB"
                     /locus_tag="OQQ57_002709"
     CDS             15279..>16534
                     /gene="ligB"
                     /locus_tag="OQQ57_002709"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
                     /protein_id="HCS1957416.1"
                     /translation="MKVWMAILISILCWQSSVWAVCPAWSPARAQEEIFRQQQQIKQW
                     DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFVSEPRDVMMPPLNGAVMHPVAHTGVRK
                     MADKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
                     ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSL
                     GVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVT
                     DGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA
                     SVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP
                     PENRFNSLTCYFASDVCQEQFISRLV"
BASE COUNT         3753 a         4227 c         4495 g         4059 t
ORIGIN      
        1 gtataaaaaa gggtgttatg gagcgtgtaa aacaacatct tcaccttaat ggcgatacag
       61 ttggctgaga gccagcaggg ggcaaatcac ctgcaaataa acacggcaca tgctggcgcg
      121 catatcgcgg atgcgttcga ggacagaaga accgacaggc ggattcttca gccgctcatc
      181 gtccatcaca aaaccttaga ccaggtattc ctgaagccga ttgaatattg agcagtagaa
      241 aatatctgga ttgacagtat tacaaggggt tggagaacgt cagaagaggc attttggcgg
      301 aagatcacag gagtcgaacc tgtccgggac cgctggcggc cccaactgga tttgaagtcc
      361 agccgcctca ccggagacga cgatcttccg cgcctcgatt gctacatgga ggcggggcgc
      421 attatagcta cttccttgag tttctacatc ccccagatca gttttttccg cctaatacac
      481 gcagcgtatt atcacgaaag cattatagtt catataaaac ccatatttta caatgacata
      541 tgagcggaat taacgctacc acgatcacat aaaacaagaa tcataaatta ataaccagat
      601 atcggaatat tcgctctcac agggatggtt tacaaaatgc gttatcggtc tcagcacccc
      661 tatagcatca aggaaaagca gatgaagagt gaagtgttgt ccgttaaaga gaaaattggt
      721 tatggcatgg gagacgccgc cagccacatt attttcgata acgtaatgtt atatatgatg
      781 ttcttttata ccgatatttt tggcattcct gccggttttg tcggaaccat gtttttggtc
      841 gctcgtgcac tggatgcgat ttccgatcct tgcatggggt tgttggccga tcgaacgcgc
      901 tctcgctggg gtaaatttcg tccgtgggta ctgtttggcg cactgccatt cgggatcgtc
      961 tgtgtactgg cctatagcac gccagatctc agtatgaacg gcaaaatgat ctatgcagca
     1021 attacttaca ccctacttac cttactttat accgtcgtca atatccctta ctgcgcattg
     1081 ggtggtgtaa tcaccaatga cccgactcag cgtatctcgc tgcaatcctg gcgttttgtg
     1141 ctggcgaccg cgggaggcat gctttctact gttctgatga tgccactggt taatttaatt
     1201 ggcggtgata ataaaccact cggtttccag ggcggtatcg cggtcctttc cgtggtggca
     1261 ttcatgatgc tggcattttg tttcttcacc actaaagaac gcgttgaagc accacctaca
     1321 acaacgtcta tgcgggaaga tttacgtgat atctggcaaa acgaccagtg gcggattgtc
     1381 ggtttactaa ccattttcaa tatcctggcg gtgtgcgtac tcggtggggc gatgatgtat
     1441 tacgtcacat ggattttggg cacgccggaa gtgtttgtcg cttttctcac cacttattgc
     1501 gtgggtaacc tgattggttc cgcactggca aaacctctga ccgactggaa atgtaaagtc
     1561 actatcttct ggtggacgaa cgccctgctg gcagtgatta gcctcgcgat gttctttgtt
     1621 cccatgcagg ccagcatcac tatgtttgtc ttcatcttcg tgattggtgt gttgcatcaa
     1681 ctggtgacac ctatccagtg ggtaatgatg tccgataccg tcgactacgg cgagtggtgc
     1741 aatggtaaac gcctgaccgg gatcagtttt gctggcacgc tgtttgtgct caaactgggg
     1801 ttggccttcg gcggcgctct tatcggctgg atgctggctt atggcggata tgatgcggca
     1861 gaaaaagcgc agaacagcgc cacgattagc atcattattg cgctattcac gattgttccg
     1921 gcgatctgtt atttgctgag cgcgattatc gctaaacgct actactcact cacgacgcac
     1981 aatctgaaaa ccgttatgga acagctggct cagggtaaac gccgttgcca gcaacaattc
     2041 acctctcaag aagtgcagaa ctaaggaacg gcaatgaaaa ttagcgatgg aaactggttg
     2101 attcaacctg gcctcaattt gattcacccg cttcaggtgt tcgaggttga acagcaggat
     2161 aatgaaatgg tggtctatgc tgccccccgt gatgtgcgtg aacgtacctg gcagcttgat
     2221 acgcctttat ttacgctgcg ctttttctcc ccacaggaag gtattgtcgg tgtgcggatt
     2281 gagcattttc agggagcgct gaataacggt cctcattatc cgctcaatat tttgcaggac
     2341 gtgaaggtca caatcgaaaa cacagaacgt tatgctgagt ttaaaagtgg caacttaagc
     2401 gcgcgtgtca gcaaaggtga gttctggtca ctcgattttc tgcgcaacgg tgaacgtatt
     2461 accggtcagg acacgaataa tcaacgaaat tatatgtttg agcggcttga tcttggcgtt
     2521 ggcgaaacag tttatggtct gggagagcgt tttactgccc tggtgcgcaa tggtcagacg
     2581 gtagagacct ggaaccggga cggcggcaca agtactgaac aggcgtataa aaatatcccg
     2641 ttctatatga ctaaccgtgg ctatggggtg ctggtcaatc acccccagag tgtctctttt
     2701 gaagtgggat cggagaaagt ctccaaagtg cagttcagcg ttgagagcga atatctcgaa
     2761 tactttgtta tcgacggtcc gacgccgaaa gcggtacttg atcgttatac ccgttttact
     2821 ggtcgtccgg cgctgccgcc cgcatggtcc ttcggcctgt ggctaaccac ttcatttacc
     2881 accaactacg acgaagcgac ggtaaacagc tttatcgatg gtatggcgga acgcaatctg
     2941 ccgctgcatg ttttccactt tgactgtttc tggatgaaag ccttccagtg gtgcgatttt
     3001 gagtgggacc cgctgacttt cccggacccg gaagggatga tccgccgcct gaaagcgaaa
     3061 gggctgaaaa tctgcgtctg gattaacccc tatatcggtc aaaaatcccc cgtctttaaa
     3121 gagttacaag agaaaggcta tttactcaaa cgcccggacg gttcgctatg gcagtgggat
     3181 aaatggcagc caggtctggc gatttatgac tttaccaatc cggatgcctg caaatggtac
     3241 gccgacaaac tgaaaggtct ggtcgcgatg ggcgttgatt gctttaagac cgactttggc
     3301 gaacgtatcc caactgatgt tcagtggttt gacggttccg atccgcagaa aatgcataac
     3361 cattatgcgc acatctacaa cgaactggtg tggaacgtgc tcaaggacac cgttggtgag
     3421 gaagaagctg tcttgtttgc ccgctcggcc tccgtcggtg cgcagaaatt cccggtacac
     3481 tggggtggcg attgttacgc taactacgaa tcaatggcgg aaagcctgcg cggtggtttg
     3541 tctattggcc tttcaggttt tggcttctgg agccactata tcggcggctt tgaaaatacc
     3601 gctccggcgc acgtttacaa atgctggtgc gcgtttggtt tgctctccag ccatagccgt
     3661 ttacacggta gcaaatctta tcgtgtgccg tgggcctacg atgatgagtc ctgtgatgtg
     3721 gtgcgcttct tcacgcaact gaaatgccgc atgatgccgt atctgtatcg tgaagctgcg
     3781 cgtgcaaacg cgcggggtac gccgatgatg cgggccatga tgatggagtt cccggacgat
     3841 ccggcttgtg attaccttga ccgtcaatac atgttaggcg acaacgtgat ggttgcgccg
     3901 gtgttcactg aagcgggcga tgtgcagttc tacctgccgg aaggtcgctg gacacacctg
     3961 tggcacaacg atgagctcga cggtcgttgc tggcataaac agcagcacag cttcctgagt
     4021 ctgcccattt atgtgcgtga taacacccta ctggcgctgg gcaacaacga tcaacgtccc
     4081 gattacgcgt ggcacgaagg cacggcattc cacctcttta atctgcaaga cgggcatgaa
     4141 gccgtctgtg aagtgcccgc tgctgacgga tcggtgatct ttactttaaa agcagcacgt
     4201 actggcaaca cgattactgt gactggtgcg ggcgaggcga agaactggac actgtgcctg
     4261 cgcaatgttg tgaaagtaaa tggtctgcaa gacggttcgc aggctgaaag tgagcagggg
     4321 ctggtggtga agcctcaagg gaatgcgctg acaattacgt tgtaatctat tgatggaatg
     4381 ccgggtacgt ctgagtcgta cccggcgaga ttgatgttta ctgcaccagc tctgccgacg
     4441 taacttcacc gctggaaacg atgccagcat tcatggtttg agtcacttgc tgctttgcgg
     4501 cgttcacggc atgcaattgc ccgctaaccg taggtttcag cggggcattg gcctgaatat
     4561 ctccactggc ggtaagctga atattgccgt cgccagtcaa cggtaattca ggccatcccc
     4621 attgttgcaa aatattcacc ggcacaccgc gtccattcag gctgatatgg gtctgacgtt
     4681 gtggcgtttg tgaaacactg gcagtggctt ccagaatgcc tttttcagta aatgcactca
     4741 gttcgctgat attcaccgtg ctgctgttgg cggtcagcgc cagcgacggg cgacgaacat
     4801 caacacgatt gaatgtcgcg gcggcggcat tcagattcgc cgagccactc cagacgcccc
     4861 atttatgatc ggtaaccagc gtcaggttgg caccgtaacc atcgagcgtg gtgagctgcc
     4921 acgggaagtc agggtcgata tcaatgatca gattgcggct ggcgctaaat ctcttcagtt
     4981 gcaggctgtt taaccaaccg ggtgtcgttt ccatccacaa ctgttgccag tttttcggca
     5041 aggtatattc cagcccggca attgccgcat catcaaggat caacgttttc ccgtcacgca
     5101 gccagttccc tgacgttctg accatacccc cttcccagcg gctggtgaac tggcgcagcg
     5161 ctacgccctg cggggaaaat tccgcgttta taatcgggtc aaataaatgc agcgaaccat
     5221 aaatgaactc gctagcgttc atcaacagtt tgccttcttg tgtctgccag tcatctttac
     5281 tgaaggtcat gttgcgcaag ctgagatcga ggtcggtcac cgcccagtcc ggaccttgca
     5341 aatgagcatc gatcacttcc aggcgaccaa tctgcaacga cgggacagag cgtaatggcg
     5401 caaagaagtc ggttagcgat ttttcgcttt gtagacgtat atccgccatg cgcaggtttt
     5461 ccacttgcca gctgccgtcg gcgttacgct gcgcgtttcc ggttaatgtc ccgcgggcga
     5521 tgtcggcacc caggttagtc agcgtaacgc gatcgttatc aatactgcct tcaatcagta
     5581 cattggtggc aggaacatca ttgagcgaaa gcgatccggc actaaactga atctgcgcct
     5641 tcgtacccag cactttaccg gcttttggtg accacggaac tacgccgcca tttacccgct
     5701 gcgcgctcag tttccattcg ctattcgggc tattaaacgc catatcacgc agttgcagac
     5761 gatcggcttt gaacggtagc ggcgcggtct ggtcggtgag attcagcgtc ccgttttcca
     5821 gcaggatggt atcgacatgg cgtggttcgg tcagttgccg actgcttagc gcaatgtcga
     5881 cacttttggc caccagggtc gcgggctgac catcacgacc aaacgtgaca ttctccagca
     5941 cgatatgaga tggcgcggaa aaacggtgat ccatcgcccc gaaggccaga tgatagtcgc
     6001 tattctcgga aacccatgcg ctgatatgtt ctgctcccca gcgggtttgc agaagaaaat
     6061 agaggccagc gatcaccact aacagagcga tgagaatgta gagaagcagc ttcccaataa
     6121 atttcatggt cttccattcc gtgaaatgca cataagagag ttatgcacga tttacgcgca
     6181 atcctcaagg cgggaatggt gaaagaggtg agactgcggc ggtaattatc ttaccgccgc
     6241 cagtgaatta ctgtttttct ggtgggaaaa tcagattcag cacgatggca gtaataccgc
     6301 ccgcggcgat cccggaggag agcaggtttt tcagccattc aggggcaaac tgcaaaatca
     6361 gcggctgctg agacacgccc agaccaaccg ccagcgacag cgcgataatc agaatcgccc
     6421 gacggttcag cggctcacga gaaacgatac gcacaccgga ggcggcgatg gtgccaaaca
     6481 ttacaagcgt tgcgccgccc agaaccggtt ctggaatgtg ttgtacaaaa ccgctcactg
     6541 ccgggaacag acccagcacg atcaacatca gcgcgacgac aaaaccgaca tagcggctgg
     6601 caacaccagt caactggatc actccgttgt tttgcccgaa gcaggagttc gggaaggtgt
     6661 taaacaccgc cgaaacaaac gagttcaggc cgtttgccag cacgccgcct ttcaggcgtt
     6721 tcatgtacag cggaccggac actggctgtt cggaaacgtc agaggtcgac gtgatatcgc
     6781 caatggtttc cagcgaagtg atcataaaga ccagcatcag cggcagcagc agactccatt
     6841 caatgccaag accgtaatag agcggcgttg gcaccataat cagttcttgc gtcatcggtt
     6901 cgttgctttc tggcaacatg cccataaacc acgccagcgc atatccggcc gccatcgcaa
     6961 tcaccagtga ggccacgcgt aagtaagggt tacgttgacg gttaagcagg ataattaagg
     7021 ctaagaccac gcctgccagc agcagatttt tcggtgcgcc gaaggtgtta tcgctcatgg
     7081 ctgcgtaacc gccgccaatg gacgttaacc caacctgaat tagcgacagg ccgataatca
     7141 tcaccacaac gccagaaacc agcggcgtaa taatgcggcg cgccagatgc agaacgcggg
     7201 agatcaccat ctcggtgcaa cttgccagca tcaacgtgcc gaacaaagcc gccatcatgg
     7261 taggaacatc agcaccaccg gttttcagcg cggtaccgcc cataatcagc ggggcaacaa
     7321 agttgaagct ggtgccctga atagacaaca gcccggagcc aaccggaccc caggtcttaa
     7381 tttgaataat cgatgccaca ccggaggcaa acagcgacat actaataatg tgttgcgtgt
     7441 cttgtgccgg taaacccagc gcctggcaga ttaatagcgc tggcgtgatc accgcaacga
     7501 acatcgccag cagatgctga caggcggcaa acagggtttg aggaagcggc ggacgatctt
     7561 caagacggta aatcagttcg ctgttttgag tctgcgcaac cggttgcgca ttttctgact
     7621 cgagggtgga aacagacatc gaaaacaatc ccgtggtagc aaagcgggca ttttagctga
     7681 ccgaaagaga aaagcaaacg tttgccacat cctcatctaa atatttaaat gagataaatg
     7741 cactttttta tataactttt ggtatttttc tgcttaaaat ccatgccatt tgttcattaa
     7801 cagctgagaa tttgacccag gaaagcataa ctcgataccc gtcatagttc atgaagttgc
     7861 cactgcgcga tgaagtatga cgagtatgaa agagtgatgc ggatacaaag gagtaactat
     7921 gtttcatctc gatactttag caacgcttgt tgccgcaacg ctgacgttgc tgctcgggcg
     7981 taagttggtc cattccgtct cctttttgaa gaaatacacc ataccggaac ctgttgcggg
     8041 tggtttgttg gtggcgctgg cgctactagt actgaaaaaa agcatgggct gggaagtcaa
     8101 ctttgatatg tccctgcgcg atccgttaat gctggctttc ttcgccacca ttggcctgaa
     8161 cgccaacatt gccagtttgc gtgccggtgg gcgtgtggtt ggcatcttct tgattgtggt
     8221 tgttggtctg ttggtgatgc aaaatgccat tggcattggt atggctagcc tgttagggct
     8281 tgatccgctg atggggctgt tggccggttc tattacgctt tccggcggtc acggtacggg
     8341 cgctgcgtgg agtaaattgt tcattgaacg ttatggcttc accaatgcga cggaagtggc
     8401 gatggcctgt gcaacgttcg gtctggtgct gggcggcttg attggcggtc cggtggcgcg
     8461 ctatctggtg aaacactcca ccacgccgaa cggtattccg gatgaccagg aagtcccgac
     8521 ggcgtttgaa aagccggatg tgggacgcat gatcacctcg ttggtgctga ttgaaactat
     8581 cgcgctgatt gctatctgcc tgacggtggg gaaaattgtt gcgcaacttt tggctggcac
     8641 tgcttttgaa ctgccgacct tcgtctgtgt actgtttgtt ggcgtgattc tgagcaacgg
     8701 tctgtcaata atgggctttt accgcgtctt tgagcgtgcg gtatccgtgc tgggtaacgt
     8761 aagcttgtcg ttgttcctgg cgatggcgtt gatggggctg aaactgtggg agctggcttc
     8821 gctggcgctg ccgatgctgg cgattctggt ggtacagacc atcttcatgg cgttgtatgc
     8881 catcttcgtt acctggcgca tgatgggcaa aaactacgat gcggcagtgc tggctgcggg
     8941 tcactgtggt tttggcctcg gtgcaacgcc aacggcaatc gccaacatgc aggcgatcac
     9001 tgaacgcttt ggcccgtcgc acatggcgtt tttggtggtg ccgatggtcg gtgcgttctt
     9061 tatcgatatc gtcaatgcgc tggtaattaa gttgtatttg atgttgccga tttttgccgg
     9121 ttaaccgatg aagcggcggt cttctcaccg ccgcctttta cgcattcgag taacgttctg
     9181 tctccggcat ccagcgttct atcaaggctt ttgcctgttg tgggtaacgt tcgtgaatat
     9241 gtcgcgccag gcgctgaact tccgggatca tcgcctgatc gcgcagtaaa tccgccactt
     9301 taaattcagc attacccgtc tgacgcgtgc ctaacaattc gccagggccg cgaatctcca
     9361 gatctttttg cgcaatcaca aaaccgtcgt tactgtcgcg cagcacttgc aggcgaattt
     9421 gcgccgtttt agaaagcggc gttttgtaga gcagcacgca gtgagaagcc accgcgccac
     9481 gacctacgcg cccgcgcagc tggtgtaact gcgccagacc cagacgctca gggttttcga
     9541 taatcatcag gctggcgtta ggcacatcaa caccgacttc aataacggta gtggcaacca
     9601 gcagatgtag ctcaccttgt ttaaacgacg ccatcaccgc ctgtttctcg gctggtttca
     9661 tccgcccgtg taccaggcca acattcaatt ctggtagcgc cagtttcaac tcttcccagg
     9721 tagcttccgc cgcctgcgct tccagtaact ctgactcttc aatcaacgta caaacccagt
     9781 acgcctgacg accttcagtt atgcaggcat ggcgcacgcg gtcaatgatg tcggtacggc
     9841 gggtatcagg aatagcgacc gtagtcactg gcgtgcggcc tggcggcagc tcatctatca
     9901 ccgaggtatc gagatcggca tacgccgtca ttgccagcgt gcgggggatc ggcgtggcgg
     9961 tcatgatcaa ctgatgcgga tggaagcctt gctgctggcc tttctcccat aacgccagac
    10021 gctgatgcac gccaaagcga tgttgttcgt cgataatcac cagcgccaga ccgttaaact
    10081 gcacctgttc ctggaagatg gcgtgcgtac caacaatcat ctgcacctga ccgctggcga
    10141 tggcttcctg ctgagacagt cgcgctttgc ctttctgctt accggcgagc cagcccactt
    10201 cgataccgag cggttcaaac cagttgcgga agttattggc gtgctgttcg gcgagtaatt
    10261 cggttggtgc catcaatgcc acctgtttgc cgtgggcaat cgcacgcagc gcggcgaggg
    10321 cggcgaccag cgttttaccg gaacctacat cgccctgtac caggcgcatc atcggcacat
    10381 ccagcgccat atcgcgctcg atctccgcca ctacgcgtgc ctgtgcgccc gttggcttga
    10441 acggtaaggc tgcgaggagt ttatttttca gcgcatcatt ggcgctcagc ggctgggcat
    10501 gaaaacgctg tgctccggca cgtaaggcta acatgctgag gttgtgcgcc agcagttctt
    10561 ccagaatcag acgacgttgc gccggatgct gcccggtttc cagatcgcta agctgtagcg
    10621 tcggtggcgg gcggtgcaaa gtgcgcaacg cttccggtag cgtcatcatt ccttgtgaca
    10681 gttccggcgg caggagttct tcaatggcgc aggtgtcgag cagatccagc gcctggtcgg
    10741 ttaatttacg cagcgtggcc tgctttacgc cttccgttgt tggataaacc ggcgtgagcg
    10801 tttcctgtaa ttctggcgtg ctgagatcgc cctgcacgcg gtattccggg tggatcatct
    10861 ccgcaccata tttaccgcgc tttgcttcgc cataagccag tacacggcgg cccgtcgcca
    10921 ggctattttt cattgccgcg ctgaaattga aaaagcgcat ggtgaggatg ccggaaccgt
    10981 cgctgatctg gcaggtcatc atccgccgac cgccgaagga gatattgcag ttcagcactt
    11041 cgccttccac cgtggcataa acgcccggca gtagttctcc gatggggtag agatgggtgc
    11101 gatcttcgta gcgcagggga aggtgtaaga gtagatcctg cacggtatgc aggttgattt
    11161 tcgccagttt gttactaagt gctgcgccaa cgcccgttag ggaactgagt gggacagcat
    11221 ctaacaggcg acctgtcatg gcacttaccc tgcagcctgc atagtagccc accagtcggc
    11281 atcagcttcg atctcgcctt gctgattgac gtggggataa ggcaggcctt tgcgttttgc
    11341 gactttcgcc agcaccggat agccgccttc aaacaacagg cgttgttgct ctgcttccgg
    11401 caacatgctg ttttcacgca ggtacatgcc tgcattttgc cgctgacgct gggcttcgta
    11461 aagaatgagg gctgaggcaa cggaaacatt cagcgactgc accatgccga tcatcggaat
    11521 gatgatgtcc tgatccgcca gggccaatgc ttcctgcgtg atgcccgttt tctcctgtcc
    11581 catcaaaatg caggtcgggc gagtgtaatc aatttcgcgg aaatcgacag cgttatcaga
    11641 aagatgggtt gccagaatct gcatgccctg gcctttgaga tgagcgacgg catcgccaat
    11701 ggtgcggtgt gttttcacct gtacccagct gttactaccc gccgctgccg aagccatggt
    11761 gcgcatgcgg ctaccaggcc agacggcgtg aacttcatgt acgccaacgg catctgcggt
    11821 acgaataatc gcagaaacgt tatgaggttt gtggacctgc tccatgcaga cggtcagatc
    11881 aggctgccgc ctggcgagca tttcgcagat gcgtgcataa cgtgttgggt tcataaaaca
    11941 ttaatttcgg tttcgggtga ctttaatcac gtctggcatc acgcggattt tgcgcatgat
    12001 attcgccaga tgcacacggt cacgagcggt cagacgaata aaggcgctgt agacgcgacc
    12061 atctttctct tccgtattca aactttgaat attcgaagtc gtggtgttaa ttgccgccgt
    12121 caggtttgcc agcgcaccct gatgattgaa catctccacc ttgatttcgg tgatgaactc
    12181 ctgcgccgtc tctttatccc attccacagc cataaacttc tctggctctt tctggtagcc
    12241 acggatgtta cggcaggatt catggtggat caccagacct ttaccggggc tgacgtgggc
    12301 gataatcggg tcgccaggaa tagggcggca gcatttcgca aaggtgatca gcacgccatc
    12361 cgcgcctttg atcggcagat gcccgtggct ttgagtcgcc ggtggaatgg aggcgtcccc
    12421 atgttgtaga tttttcgcga ccaccacgct cattgcgtta ccaaggccga tttctgccag
    12481 cagatcgtca agcgttgcca gcttcatgcg atccagctcg cgctgaatat tttcctgcgg
    12541 gatttcattg agcttacggc taccacccaa agcatggttg agcagacgac ggcccaggct
    12601 tacagaatca tcacgcttga ggtttttcag caactgacga attttggcgc gcgctttcga
    12661 gctaacgaca aagttcagcc aagcggcatt cgggcgagcg cccggagcgg taatgatttc
    12721 aacggtctga ccgctagtaa gcggctgcga cagcgggtaa ggctggcggt cgacgcgtgc
    12781 gcccacgcag gcatggccga tatcggtatg cactgcataa gcgaagtcga cgggcgttgc
    12841 accggcaggc agctcgacaa tgcgcccttc cggtgtgaaa acgtaaatct catccgggaa
    12901 gagatcggat ttaacgctct cgataaattc aaacgaacta ccggcgctct gttgcagctc
    12961 cagcaggctt tgcatccagc gctgggcgcg tatttgtgcg gtagtactgg tttcgccgtg
    13021 ctctttataa gcccagtgcg cggcaacacc catctccgcc atctgatcca tatcttcggt
    13081 acggatctgg acctcaaccg gcacgccgtg cgggccaatc atcgaggtgt gcaacgactg
    13141 atagccgttc gcttttggaa tggcgatata gtctttcacg cggcccggac gcggcttgta
    13201 caggctgtgc atctggccca gcacgcgata acaggtgtca gaatcattga cgatcacgcg
    13261 gaaagcgtag atgtccatga ttgagtgaaa acgctgctct ttgagcacca ttttgcagta
    13321 aatcgaataa agatgctttt cgcgaccact gacgcggcac ggtattcccg cttcctgcaa
    13381 acgcccttcg atttcagaaa gaatcttctg gatcatctct ttacggttgc cgcgcgcggc
    13441 tttcaccact tctttgatta cgcgataacg gttgggatac agcgcctcaa aacccagctc
    13501 ttcgagttcg gttttaatgt ggtggatacc taaacggtgc gccagcgggc tgtaaatttc
    13561 gagagtttca cgggcgatgc ggcgacgttt gtccgggcga agtgagccca gcgtgcgcat
    13621 gttgtgggta cggtcggcaa gtttgatgag gatgacgcgg atatcctgca ccatcgccat
    13681 aatcatcttg cgaaagtttt cggcctgcgc ctctttctta tcgcggaact tgagtttatc
    13741 aagtttcgac accccctcta ccagctcggc gacgctttta ccaaaaagct gttccatatc
    13801 ctggtaggtg gcgggagtat cttcaatcac gtcatgcagc agcgccgcca tcagcgtttc
    13861 atagtcgagt ttcatctcgg ccagaatgca ggcaaccgct accgggtgcg tgatataggg
    13921 ttcaccgctt gaacgtgttt gcccctcgtg agcatcacgt gcaacgagat acgcctgccg
    13981 cagacgcttg atttggtctt ccggcaggta ggtttgaatc agttgattca ggctttcaaa
    14041 cagatacaag ggcgacccgc tttgtgatta acgacgacct tcagcaatag cggtaacggc
    14101 ttgtaattca gcggcttcct gctcttgctg ttcctggcgt tcgcgaacgt cgaggatctg
    14161 gttgttgatc agaccttctt cgatttcgcg cagcgcgatt acagtggttt tatcgttttc
    14221 ttccggtacc agcggatcct ttccgcctac ctgcatctga cgagcgcgac gcgcggcgac
    14281 cagtaccagg tcaaaacggt taccaatttt ctctacagcg tcctgaacag ttacgcgtgc
    14341 catacttaaa aagctccaca ggtgaagaaa tgactgggca tgatactgaa atcaggttca
    14401 gtctgccaac aatttgctga ttaaagcgtc atgacgctgc ttttggcggc tcatgcgcag
    14461 acgttcggcg cgaataatgg tcttcaaatc ggtcaacgcg gtatcgaagt catcattcac
    14521 aatcaggtaa tcatattcgt cgtaatggct catttctgca acagcttgcg ccatacgctt
    14581 tgcaatgacc tcttcgctgt cctgaccgcg accgcgtaga cggcggtcca gttcaatttt
    14641 agacggcggt aaaataaaga tactccgcgc gtgcggcatc ttctggcgaa tttgctgcgc
    14701 gccctgccag tcgatatcga gaaaaacatc gacaccggtc gccagtactt gctcaatggc
    14761 ctcacgcgaa gtgccatagt aattaccaaa aacttctgcg tgttcgagga acgcatctct
    14821 gctaatcatt tctttaaatt catcatgatt aacaaagaaa taatgttcac cgtggacttc
    14881 accaggacgc ggttggcgtg tggtgtgtga aacagaaacc tgggtgtcat acaacggttg
    14941 ggtttttaat aaagcctgaa tcaggctgga tttacccgcg ccactggggg cagaaacaat
    15001 ataaagcgtg ccttgagcca tgagtatctt tcgtatgtga ttagcgaaat aaagcctaca
    15061 tacgagctta ttatacacgg cgcggccatg tgacgtagcc cttgctcaca ctttttgcgc
    15121 aaagttgttg cgttttgcgt agctgcttcc gcatttgcct gtgatttact gcaataaaga
    15181 cgattctcag gaagcgtcct cgcagactcc gtttttgcca ctcggctttg ccttcaccac
    15241 gttgtatatc tgccagcctg actacagcgg aggtgaagat gaaagtatgg atggcgatat
    15301 taataagtat cttgtgctgg caatcatctg tgtgggcggt ctgtccggcc tggtcgccag
    15361 ccagagcaca ggaagaaatt ttccgccagc aacagcaaat aaaacagtgg gacgatgact
    15421 actggaagga aggaaaaagt gaggtggaag acggtgttta cgatcagtta agcgcccgtc
    15481 ttacgcagtg gcaacgctgc tttgtgagcg agccccgcga cgtgatgatg ccgcctttaa
    15541 atggtgcggt tatgcatccg gttgcccata cgggtgtacg caaaatggcg gataaaaacg
    15601 cattaagtct gtggatgcga gaacgtagcg atctttgggt gcagccaaaa gttgatggcg
    15661 ttgcggtaac cctggtttat cgggacggga aactgaacaa agcaatcagt cgcggtaatg
    15721 gcctgaaagg cgaggactgg acgcagaaag ttagcttaat ttccgctgtg ccgcaaaccg
    15781 ttagcgggcc tttagccaac agtacgcttc agggggaaat atttctccag cgcgaggggc
    15841 atatccaaca acaaatgggg ggaataaatg cccgcgcaaa agttgctggc ttgatgatgc
    15901 gccaggacga tagcgacacg ctgaattctc tgggcgtttt tgtctgggca tggccggatg
    15961 gaccgcagtt aatgtctgat cgtttaaaag agctggctac cgcaggtttt actctaacgc
    16021 agacgtatac ccgtgcggtg aaaaatgctg atgaagttgc gcgcgtacgc aatgagtggt
    16081 ggaaagcgga attacccttc gtcaccgatg gcgtagttgt acgagcggcg aaagagccag
    16141 aatcccgcca ttggctaccg ggccaggcag agtggctggt ggcctggaaa tatcaacctg
    16201 tagctcaggt tgccgaagtg aaggcgattc agtttgcggt gggtaagagc ggtaaaatat
    16261 cggtggttgc gtcactcgca tctgtcatgc tggatgataa aaaagtccag cgggtgaata
    16321 ttggttccgt caggcgctgg caggagtggg atattgcgcc tggtgatcag attctcgtca
    16381 gccttgccgg tcagggtatt cctcgcattg atgatgtggt gtggcgcggt gcagaacgta
    16441 caaaaccgac accgccagaa aaccgcttta actcgttgac ctgctacttt gcttctgatg
    16501 tttgtcagga acagttcatt tcacgcttag tctg
//
LOCUS       DAJVUK010000094        16520 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.094, whole genome shotgun sequence.
ACCESSION   DAJVUK010000094 DAJVUK010000000
VERSION     DAJVUK010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16520
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.094"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            93..2321
                     /gene="crfC"
                     /locus_tag="OQQ57_002710"
     CDS             93..2321
                     /gene="crfC"
                     /locus_tag="OQQ57_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clamp-binding protein CrfC"
                     /protein_id="HCS1957417.1"
                     /translation="MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAAQLAL
                     PWSQPNIAERYAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPM
                     TALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
                     MQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVE
                     FVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISD
                     EEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVS
                     SMWGYLANRARYELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQ
                     LWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQ
                     LRQNIHQVEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALNAQLAALFQD
                     DSEPLSEIRTCCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELS
                     ESGFRPGFHFPVFHGVVPHVNTRQLFSEVISRQEATDEQSTRLGVVRETFSRWLNQPD
                     WGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFAS
                     CLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAE
                     RY"
     gene            2318..3201
                     /locus_tag="OQQ57_002711"
                     /pseudo
     CDS             2318..3201
                     /locus_tag="OQQ57_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418534.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YjcZ-like family protein"
     gene            3465..4967
                     /gene="proP"
                     /locus_tag="OQQ57_002712"
     CDS             3465..4967
                     /gene="proP"
                     /locus_tag="OQQ57_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HCS1957418.1"
                     /translation="MLKRKKVKPITLRDVTIINDSKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKYWRSLLTCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVA
                     LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT
                     PAASDIQEAKEILVEHYDNIEQKIDNIDHEIADLQAKRTRLVQQHPRIDE"
     gene            5033..5170
                     /gene="pmrR"
                     /locus_tag="OQQ57_002713"
     CDS             5033..5170
                     /gene="pmrR"
                     /locus_tag="OQQ57_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HCS1957419.1"
                     /translation="MSDAHTLLQVNGGECNEKPCLYESLTTVFSVLVVSSFLYIWFAT
                     F"
     gene            complement(5188..6246)
                     /gene="pmrB"
                     /locus_tag="OQQ57_002714"
     CDS             complement(5188..6246)
                     /gene="pmrB"
                     /locus_tag="OQQ57_002714"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HCS1957420.1"
                     /translation="MNLMRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQI
                     QLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQ
                     KELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTP
                     LAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLE
                     DVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGS
                     NIMIKLQEDGGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQL
                     HHGQFFLQNRQETSGTRA"
     gene            complement(6247..6915)
                     /gene="basR"
                     /locus_tag="OQQ57_002715"
     CDS             complement(6247..6915)
                     /gene="basR"
                     /locus_tag="OQQ57_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BasR"
                     /protein_id="HCS1957421.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGH
                     YSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKP
                     FALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR
                     LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVA
                     NEEN"
     gene            complement(6912..8555)
                     /gene="eptA"
                     /locus_tag="OQQ57_002716"
     CDS             complement(6912..8555)
                     /gene="eptA"
                     /locus_tag="OQQ57_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HCS1957422.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTV
                     SCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNVTALNLPGQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNR
                     YPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSL
                     VYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQ
                     TQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSK"
     gene            complement(8659..9996)
                     /gene="adiC"
                     /locus_tag="OQQ57_002717"
     CDS             complement(8659..9996)
                     /gene="adiC"
                     /locus_tag="OQQ57_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HCS1957423.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTPGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD"
     gene            complement(10133..10894)
                     /gene="adiY"
                     /locus_tag="OQQ57_002718"
     CDS             complement(10133..10894)
                     /gene="adiY"
                     /locus_tag="OQQ57_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator AdiY"
                     /protein_id="HCS1957424.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            complement(11219..13486)
                     /gene="adiA"
                     /locus_tag="OQQ57_002719"
     CDS             complement(11219..13486)
                     /gene="adiA"
                     /locus_tag="OQQ57_002719"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HCS1957425.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTTDFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     YWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHAMCVKA"
     gene            complement(13685..14593)
                     /gene="melR"
                     /locus_tag="OQQ57_002720"
     CDS             complement(13685..14593)
                     /gene="melR"
                     /locus_tag="OQQ57_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HCS1957426.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMMIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            14876..16231
                     /gene="melA"
                     /locus_tag="OQQ57_002721"
     CDS             14876..16231
                     /gene="melA"
                     /locus_tag="OQQ57_002721"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HCS1957427.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATLLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPSTLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPHIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGESSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            16334..>16520
                     /locus_tag="OQQ57_002722"
     CDS             16334..>16520
                     /locus_tag="OQQ57_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1957428.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIM"
BASE COUNT         3986 a         4002 c         4349 g         4183 t
ORIGIN      
        1 tttcttgcag taattataaa agccgaaaac agaactcaaa aacaatctgg ctaaataaaa
       61 gtaacaaaat ttgctttaag gaagaatttt ctatgtacac acagaccctg tatgagttaa
      121 gtcaggaggc tgaacgcctg ttacagcttt ctcgccaaca gttgcagtta ctggaaaaaa
      181 tgcctctctc tgtacccgga gacgatgcgg cacaactggc tttaccctgg agtcagccta
      241 atatcgccga acgttacgcg atgctgaata atgagttgcg taaaatttcc cgactggaaa
      301 tggtgctggc gattgtcggt actatgaaag cagggaaatc aaccaccatt aatgccattg
      361 ttggtacgga ggttctgcct aatcgtaatc gcccaatgac tgcgctgccg acgcttattc
      421 gccatacgcc cgggcaaaag gaaccggtac tgcatttttc acatgtcgcg ccaatcgatt
      481 gtttaattca acaattacaa cagcgcctgc gtgattgcga tattaagcat ctgaccgatg
      541 tgctggaaat agataaagat atgcgtgcgc ttatgcagcg gatcgaaaat ggcgtcgctt
      601 tcgaaaaata ttatctgggt gcccagccta tttttcattg tctgaaaagt ttgaatgatt
      661 tagtgcgact ggcgaaggcg ctggacgtcg attttccttt ttctgcttac gccgccattg
      721 agcatattcc cgtgattgaa gtggagtttg tccatctggc ggggctggaa agttatcccg
      781 gtcagttgac gttactggat acccccgggc caaatgaagc cgggcaaccg catctgcaaa
      841 aaatgcttaa ccagcagctg gcacgcgcct cggcggtact ggcggtgctg gattatacgc
      901 aactgaaatc gatctccgat gaagaggtcc gtgaggcgat tttggcggtg gggcaatcgg
      961 tgccgctgta tgtgctggtc aataagttcg atcaacagga tcgtaacagt gacgacgccg
     1021 accaggtgcg ggcactgatt tccgggacgc tgatgaaagg ctgtattacg ccacagcaga
     1081 tatttccggt gtcgtcgatg tggggctacc tggcgaatcg ggcgcgctat gagttagcca
     1141 acaacggtaa gttaccagcg ccagagcaac aacgctgggt ggaagatttt gcccatgccg
     1201 cgctcggcag gcgctggcgt catgccgatc tggcggacct cgaacatatt cgtcatgctg
     1261 ccgatcagtt gtgggaagat tcgctgttcg cccagccaat tcaggcgttg cttcatgccg
     1321 cttacgctaa cgcctcattg tatgctctgc gatctgctgc gcataaactg ttgaattacg
     1381 cgcagcaggc gcgggaatac ctggattttc gtgcgcacgg gttaaacgtc gcttgtgaac
     1441 aattgcggca aaatatccat caggtcgaag aaagtttgca gctattgcaa ctcaatcagg
     1501 cgcaggtgag cggcgagatt aaacatgaaa tcgagctggc cctgacctcc gccaaccact
     1561 ttctgcgtca acagcaagat gcgctgaatg cgcagttagc cgccttgttt caggatgatt
     1621 cggagccgtt aagcgagatt cgtacctgct gtgagacact gttacagacg gcgcagaaca
     1681 ccatcagtcg cgactttacg ctgcgttttg ccgagcttga atccaccctt tgccgggtgt
     1741 taaccgatgt tattcggccc attgagcaac aagtcaaaat ggaattgagc gagtcagggt
     1801 ttcgtcctgg gtttcatttt cctgtttttc acggagtagt tccccacgtc aacactcgcc
     1861 agctgttcag tgaagtcatt tcgcgccagg aggcaacgga cgagcagagc acgcgtttag
     1921 gcgttgtgcg tgagactttt tcgcgctggt tgaatcagcc cgactgggga cggggaaatg
     1981 agaaatcccc gacagaaacg gttgattaca gtgtgttgca acgagcatta agcgcagaag
     2041 tcgatcttta ttgccaacaa atggctaaag ttctggcaga gcaggtcgat gaatctgtta
     2101 cggcaggcat gaatactttt ttcgctgagt tcgcttcatg tttgacggaa ttacagacgc
     2161 gtttacgcga aagcctggct ctgcgtcaac aaaatgaatc ggtggtcagg ctgatgcagc
     2221 agcaattgca gcagactgtg atgactcacg gctggattta caccgacgcc cagctgttac
     2281 gcgatgatat tcaaacactt ttcacggcag aacgatattg accaagacgt tactggacgg
     2341 ccccggtcgc gtgctggagt cggtttatcc ccgcttttta gtggatctgg cgcagggcga
     2401 tgatgcccgc cttccacaag cccatcagca gcagtttcgt gaacgactga tgcaggaact
     2461 tctttcgcgt gtgcagcttc agacatggac gaacggcggc atgttaaatg cgccgcttag
     2521 cctgcgactg acaatggtgg aaaaactggc gtcgatgctg gatcccggtc atctggcgct
     2581 gacgcagatc gcgcagcatc tggcgctgct gcaaaaaatg gatcaccgcc agcactctgc
     2641 tttcccggag ctcccccagc aaattgccgc cttgtatgag tggttttcag cccgttgtcg
     2701 ctggaaggaa aaggcgttaa cgcaacgagg ccaggcctac tggtgcaggc aggtgatcag
     2761 agcgagcaaa tttttacccg ctggcgtgct ggggcgtata acgcctggtc gttgcctggg
     2821 cgctgtttta tcgttctcga agagttgcgt tggggggcat ttggcgatgc ctgtcgtctg
     2881 ggaagcccgc aagcggtggc gttgctgctg ggtgatttgc gcgtgaaagc gacacaacat
     2941 ctggcagaga gtatcaatgc ggccccgacc acgcgtcact attaccatca gtggtttgcc
     3001 tcttcgaccg ttccgacggg cggggatcat gctgattttt taagttggct gggaaagtgg
     3061 accacggcag ataaacaacc cgtttgctgg tcagtgaccc aacgttggca aactgtcgcg
     3121 ctggggatgc cacgactctg ttcagcgcag cgtttggtgg gggcaatggt cgaggaaatc
     3181 ttctctgtaa atttggcgta aataatcagt tacatcaatg agtcctaaac gaaatccatg
     3241 cgtgaagttg atcacaaatt taaatactgg tagggtaaaa aggtcattaa ctgcccaatt
     3301 caggcgtcaa ctggtttgat tgtacattcc ttaaccggag ggtgtaagca aacccgctac
     3361 gcttgttaca gagattgcat cctgcaattc ccgctcccct tttgcggccg tcgcgctgat
     3421 ttttctggcg tttgcggaaa tgggccaact ctgcgaggaa agctatgctg aaaaggaaaa
     3481 aagtaaaacc gattaccctt cgtgatgtca ccattattaa tgacagtaaa ctgcgtaaag
     3541 ccattaccgc agcatcactg ggtaatgcaa tggaatggtt cgattttggt gtttatggtt
     3601 ttgttgctta cgcattaggt aaagtttttt tcccgggggc tgaccccagc gtgcagatgg
     3661 ttgctgcact tgccactttc tccgttccct ttctgattcg accgcttggc ggactcttct
     3721 ttggtatgtt gggcgataaa tatggtcgcc agaagatcct cgctatcact attgtgatta
     3781 tgtcgatcag tacgttctgt attggcttaa taccgtccta cgacacgatt ggtatttggg
     3841 caccgattct gctgttgatc tgtaagatgg cacaaggttt ctcggtcggc ggtgaatata
     3901 ccggggcgtc gatatttgtt gcggaatact cccctgaccg taaacgtggc tttatgggca
     3961 gctggctgga cttcggttct attgccgggt ttgtgctggg tgcgggcgtg gtggtgttaa
     4021 tttcgaccat tgtcggcgaa gcgaacttcc tcgactgggg ctggcgtatt ccgttcttta
     4081 ttgctctgcc gttagggatt atcgggcttt acctgcgcca tgcgctggaa gaaactccgg
     4141 cgttccagca gcatgttgat aaactggaac agggcgaccg cgaaggtttg caggatggcc
     4201 cgaaagtctc gtttaaagag attgccacta aatactggcg cagcctgttg acatgtattg
     4261 gtctggtaat tgccaccaac gtgacttact acatgttgct gacctatatg ccgagttatt
     4321 tgtcgcataa cctgcattac tccgaagacc acggggtgct gattattatc gccattatga
     4381 tcggtatgct gtttgtccag ccggtgatgg gcttgctgag tgaccgtttt ggccgtcgtc
     4441 cgtttgtgct acttggtagt gttgccctgt ttgtgttggc gatcccggcg tttattctga
     4501 ttaacagtaa cgtcatcggc ctgatttttg ccgggttact gatgctggcg gtgatcctta
     4561 actgctttac gggcgttatg gcttctacct tgccagcgat gttcccgacg catatccgtt
     4621 acagcgcgct ggcggcggca tttaatattt cggtgctggt tgccggtctg acgccaacac
     4681 tggcggcctg gctggtcgaa agctcgcaga atctgatgat gcctgcctat tacctgatgg
     4741 tagtggcggt gattggttta atcaccggcg taaccatgaa agagacggca aatcgtccgt
     4801 tgaaaggtgc gacaccggcg gcgtcagata tacaggaagc gaaggaaatt ctcgtcgagc
     4861 attacgataa tatcgagcag aaaatcgata atattgacca cgagattgcc gatttgcagg
     4921 cgaaacgtac ccgcctggtg cagcaacatc cgcgaattga tgaataagct gaaacggatg
     4981 gcctgatgtg acgctgtctt atcaggccaa ttgaactctt aaggttcact taatctctga
     5041 cgcgcatact ctcctccagg ttaacggagg agagtgcaat gaaaaaccgt gtttatatga
     5101 aagtttaact accgtgttca gcgtgctggt ggtcagcagc tttctttata tctggtttgc
     5161 cacgttctga tctttcttca gccgtaccta ggcccgcgtg ccggaagtct cttgccggtt
     5221 ttgcaggaaa aactgcccgt gatgcaactg tgtaatgcgg ctgacaatac ttaaccccag
     5281 accaatcccg ccataacggc tgtccatacg tacaaacgct ttactcaact ccccgcattt
     5341 actctcatca atacctggtc cttcatcttc aactgccatg accgctccgc catcttcttg
     5401 cagcttaatc ataatgttgc tgccttgcgg gctgtaacga tgggcgtttt ctaccaggtt
     5461 tcgcaataac atccgcagca gggttgcatc accctgaacg gtgatgtcgg cggcgctctc
     5521 tggcaatagc agggtttgct gtcgctggtc gagcatggta ctgagttcgt catacgaggg
     5581 gagaatgaca tcttccagca gttttacatg ttgataatta ccggaagaaa atgactgtcc
     5641 ggcacgcgcc agttgcagca gctgggagac gctctccatc atctgatcaa gccgtgccac
     5701 taacggtgct acatcaatgt gatgcgtttt cgccagcagt tccagatgca aacgcacccc
     5761 cgccagtggc gttcgcagtt cgtgcgcgac gtcagcggta aacaaccttt cgttatccag
     5821 cgtgctggtc aggcgactga ccagatcgtt caacgccgaa accaccgctt cgatttcgag
     5881 ggtggcgctg tgaatggcaa tgggcgttaa gttgtcggca gtgcgcgctt ccagctcttt
     5941 ttgcagctcc gccagcgggc gggtgatgcg gcgtaccgcc tgatagcaga taaatagcgt
     6001 caggctgacc ataaagacgc cggggacaat caggctggcg accgcctcgc ggatctcacg
     6061 catgatgtgg cgatcgttgt tgcgattgtc gcgtagcgcc tgctcaaaca gctgaatctg
     6121 ctcggtactt tcatgccata gccagaagac gctgatcagc tcaaacacca acaaaatggc
     6181 cccgatagtc aatatcagcc gttggcgcag cgatattggt cggcgcagaa aacgcatcag
     6241 attcaattag ttttcctcat tcgcgaccag catatagcca aagccgcgca cggtgcggat
     6301 acgggatttg cccactttgt cgcgcagatt gtggatatgc acttccaggg tgttggtcga
     6361 gggttcattg tcccagttat agatgtcgtt gtagagaatt tcccgatgta ccggactgcc
     6421 tgctttgagc attaaccgtg acagcagagc atattctttg ggcgtcagaa tcaactcttc
     6481 accgcccatc catacctgac ggcgacccat attcagcgtc agattgccaa caatcagctc
     6541 actttcgccc tgattattat ggcgtcgtag cagggcgcgg atacgggcgt gtaactcttc
     6601 cagcgcaaaa ggcttcacca gatagtcatc ggcaccgaca tccagcccgg cgattttgtc
     6661 ggtcagcgta tcgcgagcgg tgaggatcag taccggcagg gtatattttt tctgccggat
     6721 acgggcgaga aaatgcagtc catcttcgtc gggtaaccct aaatccagta ccaccaggct
     6781 gtaatgaccg gcttcaaggc tttgttccgc catccgcgcg gttgtcacgc catcgcacgc
     6841 gtagccttcg gtttgcgccg ccagaatcag tccctgcaat aacagcgtat cgtcttcaac
     6901 aatcagaatt ttcatttact cactctcctg caagtttgca gaatatcatc cgcagcctgg
     6961 taatacttcg tctcaacgcc agttaatccc aatagcgtgg agaataaatt gtcttgtgaa
     7021 tagtgttgcg tttgcgcctg tttttgcagg cagttctggt caacctgata ccgtttttga
     7081 taatcctccg acagccacag cagcatcggc acctgttttt ggctatccgg ggcgatggca
     7141 taaggcagac cgtgcagata gatgccattt tcacctaacg attcaccgtg gtcagaaaga
     7201 taaaccaggc tggtggtaaa tttatcctga tgttctttca gcagattaat cgctttatca
     7261 acaatatagt cgacgtaaac cagcgtgttg tcgtaagtgt tcaccagttg ctctttggta
     7321 caggtctgga tctcattggt gtcgcaggtt ggggtaaatt tcctgaactg cggcggatag
     7381 cggttgtaat aggtcggacc gtggctgccg atggtgtgta agacaatcac gccatcaccc
     7441 tgcaggttat tgatgtactc ttccagcccg tggaacagca cttcgtcata gcattcgccg
     7501 ttgatgcact gaccaggcag attcagcgcg gtgacgttct ggtgaggcac gcggtcgcag
     7561 gcacctttac agccgccatc gttgtcattc cacagcacgt tgatgcccgc tcgctgaatg
     7621 atatccagca cgccttcctg gtgctgtgcc agctcttctt tgtaatgctc acgcggcata
     7681 tccgagaaca tgcacggtac tgaaactgcc gttgccgtgc cgcaagatac ggtattaggg
     7741 aaatagacca cgttatcttt cgccagccgc gggttagttt cacgcgggta gccgttgagg
     7801 gagaagttct ccgcccgcga ggtttcgccg acaatcagga tggtcaaatt tttacgtttt
     7861 tcgttctgca ttaacgggtt gcggtgggcg tcttcaccaa ttcgcaccag cggtagattt
     7921 gccagtcgct gatgggagta ccatgaccag ctggcaacaa tgctgttaga ggggcttaag
     7981 gatttcacca gctctttgtt attgcggaac aacgaggcgt agtctttata aaacagtgcg
     8041 gcgaccagca aaatcagtag tacagaaacc agaatattgg ctccacggaa aagaacactg
     8101 cgcagacgcg aggtggcagg tttgattttt atccagcagg caatcagcgc agcaagcacg
     8161 ccgctgaatc ccagcgttaa taacatttgc ggtgtcatca gcgcataact ttctgccgga
     8221 gtggtatcaa taatattggc aatcatcgag cggtcgatga cgatgccgta agtcattatg
     8281 aaatattgtg cagccgcgcc aaccagaata aacaggcagg ccagtggtcg attaagccat
     8341 aagaaagagc ttagtgtcag gacaatatta atcacgctga aagcgacgac cggcatcgac
     8401 aagaaaacca gtacgttatg cagcgaatcc agcggcagcg cctgcaacac ctgtttaaaa
     8461 aaggcaatat tcaggcagat agagatataa aaagcggcca acaatagcca ggcgagtaaa
     8521 ttcaaagagg gtctttttag taggcgcttc aacatcacgg tgtttccatc gaacaaagtg
     8581 cgcatatgct cgcaaagcaa aattaagcca accttaagtt cttaaggttg gcttttatgt
     8641 ttgctggatt aaggggaatt aatctttgct tattggtgca tctaagggat acgggttttt
     8701 atgtagccgg ttgtaattca gcgcatacat ggcggtgatg accatcaggg tgacaaatga
     8761 ccacataacc tctttcgctc cggaccccac cacggcccag atgcagtaga ggaaggcaat
     8821 ggtagtaact gccagatatg ccgggcgtgc tttaccaaag tgaccgtgtc cgagcagcag
     8881 taacgccgca caggtgtaaa gatatggcac cagtgtaaag atgaccgaga cggaagaaac
     8941 cagaccgaac tctttggtcg cgtttggtga aatgctgctg agctggaaga tggtcatcaa
     9001 aataccgacg ataatcagcc ccgccactgg cgtacccgct ttatttacac gggcaaaaat
     9061 cggtgggaac agtccgtcat cggcagcggc tttcgccgtt tgacccgcca gcaacgtcca
     9121 gccgcccagt gaacctaagc aacccgcagc tgcgcagaag gaaacaatgg ccccgggggt
     9181 gtcacccaac gccatccgtg cggcatcacc gaatggcgaa gcagaaacgc gcagtgcggc
     9241 attagggatc atccccataa tcgcggtggt agaaagtaca tagcaaacgg cggcaatcaa
     9301 taccccacca atggtggcga tagggacatt gcgtttcggg tttttcacca cacctgcggc
     9361 aacggaggca ctttccacac cgatgaacga ccacagcgta acgttaaggg tactttgaat
     9421 tgcaccgaag gtacccaggc cgctgacgtt ccatgccgcc atataggttt caccacggaa
     9481 ccagaaccag ccaaatacgg caatcccgac gatggggatc agcgccagca cggtggcaac
     9541 tgcctgcaca cgggtgatca ttttcggacc aacaatgttc agcaggacga agatccacag
     9601 caccacgacg caggtgatgg ttaataccaa tggatctttc agaatcggga agaagtaact
     9661 taaatatcct acgccaatga ccaccatggc gatattgccg atccagcagg ccagccagta
     9721 gaggacgttg gtttgataac cgagaaacgg gccaaagcag cggcgggcgt aagcgtaaga
     9781 accaccagga cttgggtcga ggaacgacat tttggcgtat accatcgaga gccccagtgc
     9841 accgataatc gtcaccaacc atccataaat ggcaatcccg ccagtggagg ccaggtttgc
     9901 aggtaacaga aaaacacctg accccataat attccccgac accatcaggg tgacggggat
     9961 taagcccact ttgtgagcat cagcatccga agacataatt aaactcctgc gaaggcgagc
    10021 ttcgtgacaa taaattacgt catatcatac gcctgcattc gatagttgaa ttattatcga
    10081 ccgggttatc gctgatgccg ttattaatat agctcttcgt taaggttaaa aatcaggcga
    10141 cagtgcgttc tctgtgctga ctaacataat gcagcggcgt cataccgtag aagtctttaa
    10201 agacagaaat aaagtacgac gtactgttgt agccgcagga ctgtgatacc tgagagatat
    10261 ttttaccgtc catcattaat tcatttacgg cataacgcat gcggcaggtg gtgattattt
    10321 ggctataact ggtgttttcg cttttcagct ttttctttaa cagacttggg ctaagacata
    10381 aacaactggc taccatacta agattccagt ctttgtgaat atcgctttca ataatttgat
    10441 aaacgctgtc acttacacaa ttacgtaaca tatacatcat taatgaaagg aattttttac
    10501 tgtcgagaaa acgggatagc accgtgaata ataatgcgcg tgttcgttcc ttttctgact
    10561 cagtttctgc gggcatcatg ctgtgttgcg cggcaacgcg aaagacgtct ggcgtcaggc
    10621 atggcagggt gagtatgggc gtagcgctac gttgccatac tggtatttgc gagagatctt
    10681 tattcagaaa ccggaggtaa tctttgatga tgtcgtgact aatatgagca accaaagtgt
    10741 tgttaagaga ggagacgtcg ataatattat tttcacaatt taataacgcc atatggttag
    10801 ctttaaggct aataggttct ttcccattca cccttatcca gacatctttt tcagtcaata
    10861 aaacaataca aggttggtcg ctgcaaatcc tcatacatgt actcctgagt gcgaataaaa
    10921 gaccagttct cgctaaagca aagcgatacc gggaaatggt tatataattg tatgacgaat
    10981 ataaacatgc ataaaaataa cgagttttac taatattaca aatttttata gtaatttctc
    11041 atgtacatat ttttttacag ggtaaataac aggcaaaaaa aagcgcgggg tggggccgcg
    11101 caaaaagtat gacatttttg tttgcagcaa tttttatgaa aacgttgcca tactcaaaag
    11161 gcctaaggcc aggcggcgta atgttattta aacaattacg ccttcagcgg aatagtggtt
    11221 acgctttcac acacatagcg tggtaaatac cgtcaataat ttcagtccct tcagtttcgt
    11281 gttcaaatcc agggaaatgg tggtcccagg attgcagcga gcgtaaataa cttacttgcg
    11341 gactgttttt atcgccgaag ttttcaccag acagcagcat cgggattcct ggcggatatg
    11401 ggataactga gtttgccgcg atgcgtcctg gcagattttc aatggatacc agttcgacat
    11461 tgttgtcgac aatcgcgttg tacgcttcac gcggggtgat ttccgccacc ggcaggccgg
    11521 aataggcttc gttcaaccgt gcgccagggt tgttttcttt cagccaggca aacatggtgt
    11581 cacccagatc gtgaatcccc atgttcgcgt aagtgtcagg atattgttca acaagttccg
    11641 gcatcacctg cgccagcggt gtgttggcgt catagtggcg tttgaaggag caaagggtgt
    11701 taaccagagt cccccatttc ccacgggtta cgcccataga gaacaggaac ataatttgga
    11761 agtcagtggt gcgggtaggc acaatgccgt ggcgaccaag ccaggcagtg accagcgccg
    11821 ccggaacacc ggtttcttcc agttcaccat cttcacccat tcccggagca aggatgctga
    11881 ctttaatcgg gtcgagcata ctccagttat ccggaatatc tttgaagccg tgccagcttt
    11941 cgcccggatg cattacccag tagtcctgaa cggtggtcag cagtttggtt ggtgcgtcag
    12001 caaagtcata ggttttgccg gtttgtgggt cggtgacgac ttctttgttc cacggtttga
    12061 agaaccagct accgtcagcg gtgaactctt tatacagccg cgccatcgcc tgacggaaat
    12121 caaccgcttc gtcgatcact tcctgcgtca gtgacaggcc gctgttgccg tccatcatcg
    12181 acaccgccac gtcgttggat gcgcagatgg catacagcgg ggaggtggtg gcatgcatca
    12241 tgtaggcctg gttgaagcgg gagaagttaa tcgccccacg accttcacgt acatgaatat
    12301 aagaagcctg tgaaagcgca ttcagcagtt tgtgggtgga gtgggtggcg aaaacggtag
    12361 gaccgttgtg atcgccaggt tcgccgcgca tggcatagtg atcggcatag atcgggttga
    12421 aacgtgcata gccgtaccag gcttcgtcaa agtgcagacg atcggaggtt ttttccagca
    12481 gatcctgcgc ttctttagcg ttataacaca cgccgtcata ggtgcagttg gtcaccacgc
    12541 agtaagacgg tttttgcccg gctttgtctt tagtcagcgg gctttcactg attttcttct
    12601 gcaaggtttc aggttgcatt tcctgcggat agattggccc gataatgccg tagcggttgc
    12661 ggcttggcac catgtagacc ggtttcgcgc ctgtcagcat caagccttgt tcgatggatt
    12721 tatggcagtt acggtcaacg accacgacat cgttatcggt catgcaagcc tgcatgatgg
    12781 tgcggttaga gccggaagta ccgacgacta ccgaccagga gcgatcggca ccaaatacgc
    12841 gtgcggcata tttttcgctt tcgccaaatg cgccagtatg gtcaagcaaa gaaccgaggg
    12901 aagttcgttc gatgcccata tcggtgcgga acagattttc tccatagtag tcatggtaga
    12961 aacgtccggc gggtgttttg gtaaaaccaa cgccgccctg gtggcctggc gctgcccagg
    13021 aatattcatg gatgtcgcta tacttcatca gcgcgctgaa cagtggcggc aacagctgct
    13081 ggcggtagcg ggtcatcgcg gcaacggcgc gtccggcgat aaagtcggtg gtatcttcca
    13141 gaatccaggc gaattcatcg acaagctcca gcaggtcgcg atccattgcg gcgagggctt
    13201 tttcccgatc gcccaacagg aagaccggca cgttttgttg gcgctcatga agcttaccga
    13261 tcaattgtct gacgttttga tgttcgtccg gatgttccat ttgatagctg aacatcaggc
    13321 agtcaatggc ttcgtttgaa gagagaatgg caaaaccatc atcaaaggag gtggatttaa
    13381 tcacggtaac attttgctgg cttaaagcat ctgccagacg ctcaacggcg ttaccgaccc
    13441 aggtgtcttg atggagaaac tcgctttcaa caattaatac tttcatcatt gcttacccgg
    13501 ttatgaagga atcttcgttg cgggcaagta tcttccggcc ttttcgggct gtaaagcgcg
    13561 tgaaaaacaa acatttttga aatatttatt tttataaaca atgcgttatg tgattatttt
    13621 aaattatttt cactgcttgt tatcgacggc taaactattt ttttggctga tactgatatc
    13681 gtctttagcc gggaaacgtc tggcggcgct gttggctaag tttgcggtat tgttgcggcg
    13741 acatgccgac atatttgccg aacgtgctgt aaaaacgact acttgaacga aagcctgccg
    13801 tcagggcaat atcgagaata cttttatcgg tatcgctcag taacgcgcga acgtggttga
    13861 tgcgcatcgc ggtaatgtac tgtttcatcg tcaattgcat gacccgctgg aatatcccca
    13921 ttgcatagtt ggcgttaagt ttgacgtgct cagccacatc gttgatggtc agcgcctgat
    13981 catagttttc ggcaataaag cccagcatct ggctaacata aaattgcgca tggcgcgaga
    14041 cgctgttttt gtgtgtgcgc gaggttttat tgaccagaat cggttcccag ccagagaggc
    14101 taaatcgctt gagcatcagg ccaatttcat caatggcgag ctggcgaatt tgctcgttcg
    14161 gactgtttaa ttcctgctgc cagcggcgca cttcaaacgg gctaagttgc tgtgtggcca
    14221 gtgatttgat catcatgccg tgagtgacgt ggttaatcag gtctttatcc agcggccagg
    14281 agagaaacag atgcatcggc agattaaaaa tcgccatgct ctgacaggtt ccggtatctg
    14341 ttagttggtg cggtgtacag gcccagaaca gcgtgatatg accctgattg atattcactt
    14401 tttcattgtt aatcaggtat tccacatcgc catcgaaagg cacattcact tcgacctgac
    14461 catgccagtg gctggtgggc atgatatgcg gtgcgcgaaa ctcaatctcc atccgctggt
    14521 attccgaata cagcgacagc gggctgcggg tctgtttttc gtcgctgctg cacataaacg
    14581 tatctgtatt catggatggc tctctttcct ggaatatcag aattatggca ggagtgaggg
    14641 aggatgactg cgagtgggag cacggttttc accctcttcc cagagaggcg aggggagcgt
    14701 ccgagcatca tgaggccgaa aactctgctt ttcaggtaac ttattaccat aaactcagat
    14761 ttactgctgc ttcacgcagg atctgagttt atgggaatgc tcaacctgga agccggaggt
    14821 tttctgcaga ttcgcctgcc atgatgaagt tattcaagca agccaggaga tctgcatgat
    14881 gactgcaccc aaaattacat ttatcggcgc tggttcgacg attttcgtta aaaatattct
    14941 tggtgatgtg ttccatcgag aggcgctgaa aacggcgcat attgccctga tggacattga
    15001 tcccacccgc ctggaagagt cgcatattgt ggtgcgtaag ctgatggatt cagcaggggc
    15061 cagcggcaaa atcacctgcc acacccaaca gaaagaagcc ttacaggatg ccgattttgt
    15121 cgtggtggca tttcagattg gcggttatga accttgcacg gtgactgatt tcgaggtctg
    15181 taagcggcat ggtctggaac aaaccattgc cgatacgttg gggccgggcg gtattatgcg
    15241 cgcgctacgt accattccgc atctgtggca aatttgcgag gacatgacgg aagtctgccc
    15301 cgatgccaca ttgctcaact acgttaaccc aatggcgatg aatacctggg cgatgtatgc
    15361 ccgctatccg catatcaaac aggtagggct gtgccattcg gtgcagggaa cggcggaaga
    15421 gctggcgcgt gacctcaata tcgatccgtc cacgctgcgt taccgttgcg ctggtatcaa
    15481 ccatatggcg ttttacctgg aactggagcg taaaaccgcc gacggcagtt acgtgaatct
    15541 ctacccggaa ctgctggcgg cttatgaagc agggcaggca ccgaagccac atattcatgg
    15601 taatactcgc tgccagaata ttgtgcgcta cgaaatgttc aaaaagctgg gctacttcgt
    15661 cacggaatcg tcagaacatt ttgccgaata tacgccgtgg tttattaagc caggtcgtga
    15721 ggatttgatt gagcgttata aagtaccgct ggatgagtac ccgaaacgct gcgtcgagca
    15781 gctggcgaac tggcataaag agctggagga gtataaaaac gcctcccgga ttgatattaa
    15841 accgtcacgg gaatatgcca gcacaatcat gaacgctatc tggactggcg agtcgagtgt
    15901 gatttacggc aacgtccgta acgatggttt gattgataac ctgccacaag gatgttgcgt
    15961 ggaagtagcc tgtctggttg atgctaatgg cattcagccg accaaagtcg gtacgctacc
    16021 ttcgcatctg gccgccctga tgcaaaccaa catcaacgta cagacgctgc tgaccgaagc
    16081 tattcttacg gaaaatcgcg accgtgttta ccacgccgcg atgatggacc cgcatactgc
    16141 cgccgtgctg ggcattgacg aaatatatgc tcttgttgac gacctgattg ccgcccacgg
    16201 cgactggctg ccaggctggt tgcaccgtta aaacgcgact aaacgctact gcgccggggg
    16261 atttattccg gcgcacacct ctgacgatac caataacaga aggcgggcgt tggtaacagc
    16321 gacccgatac cctatgagca tttcaatgac tacaaaactc agttatggat ttggagcgtt
    16381 cgggaaggat tttgcgatcg gcattgtgta tatgtacctc atgtattact acaccgatgt
    16441 cgttgggctg tctgtgggtt tggtcggtac tttgtttctg gtggcgagga tctgggatgc
    16501 tattaacgat ccgattatgg
//
LOCUS       DAJVUK010000095        16477 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.095, whole genome shotgun sequence.
ACCESSION   DAJVUK010000095 DAJVUK010000000
VERSION     DAJVUK010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16477
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.095"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(122..1405)
                     /gene="gltA"
                     /locus_tag="OQQ57_002723"
     CDS             complement(122..1405)
                     /gene="gltA"
                     /locus_tag="OQQ57_002723"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HCS1957429.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            complement(1611..1718)
                     /locus_tag="OQQ57_002724"
     CDS             complement(1611..1718)
                     /locus_tag="OQQ57_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957430.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            2099..2503
                     /gene="sdhC"
                     /locus_tag="OQQ57_002725"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2099..2503
                     /gene="sdhC"
                     /locus_tag="OQQ57_002725"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HCS1957431.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            2497..2844
                     /gene="sdhD"
                     /locus_tag="OQQ57_002726"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2497..2844
                     /gene="sdhD"
                     /locus_tag="OQQ57_002726"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HCS1957432.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            2844..4610
                     /gene="sdhA"
                     /locus_tag="OQQ57_002727"
     CDS             2844..4610
                     /gene="sdhA"
                     /locus_tag="OQQ57_002727"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HCS1957433.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            4626..5342
                     /gene="sdhB"
                     /locus_tag="OQQ57_002728"
     CDS             4626..5342
                     /gene="sdhB"
                     /locus_tag="OQQ57_002728"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit
                     SdhB"
                     /protein_id="HCS1957434.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            5643..8444
                     /gene="sucA"
                     /locus_tag="OQQ57_002729"
     CDS             5643..8444
                     /gene="sucA"
                     /locus_tag="OQQ57_002729"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HCS1957435.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYSDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            8459..9676
                     /gene="odhB"
                     /locus_tag="OQQ57_002730"
     CDS             8459..9676
                     /gene="odhB"
                     /locus_tag="OQQ57_002730"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HCS1957436.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKSPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLITIK
                     ELLEDPTRLLLDV"
     gene            9952..11118
                     /gene="sucC"
                     /locus_tag="OQQ57_002731"
     CDS             9952..11118
                     /gene="sucC"
                     /locus_tag="OQQ57_002731"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HCS1957437.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQLDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            11118..11987
                     /gene="sucD"
                     /locus_tag="OQQ57_002732"
     CDS             11118..11987
                     /gene="sucD"
                     /locus_tag="OQQ57_002732"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HCS1957438.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(12091..12813)
                     /gene="mngR"
                     /locus_tag="OQQ57_002733"
     CDS             complement(12091..12813)
                     /gene="mngR"
                     /locus_tag="OQQ57_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HCS1957439.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
     gene            12982..14898
                     /gene="mngA"
                     /locus_tag="OQQ57_002734"
     CDS             12982..14898
                     /gene="mngA"
                     /locus_tag="OQQ57_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001393949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HCS1957440.1"
                     /translation="MNLTTLTHRDALRLNARFTSREEAIHALTQRLAALGKISSTEQF
                     LEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVV
                     LLAIPPNEAGTMHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGGTQPSASF
                     SNAPTIVCVPACPAGIAHTYMAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNS
                     ATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDT
                     QPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMY
                     RKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAG
                     YLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNG
                     LSGSNALLLGAIFGFMCSFDLGGPVNKAAYAFCLGAMVNGVYGPYAIFASVKMVSAFT
                     VTASTMLAPRLFKEFEIETGKSTWLLGLVGITEGAIPMAIEDPLRVIGSFVLGSMVTG
                     AIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRRH
                     AVKHGNYLTDGVMP"
     gene            14916..>16477
                     /locus_tag="OQQ57_002735"
     CDS             14916..>16477
                     /locus_tag="OQQ57_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HCS1957441.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV
                     RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK
                     TEFLWQSSDGSEVTAQVLPLGYAIGKYLPTDENGLRKRLDSYFDVLEKASVTKEILLP
                     NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRESLATLKGEFIDGK
                     YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK
                     NHAHDSIGCCCSDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNL
                     MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF
                     MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLV
                     DKDSGVRYDRVL"
BASE COUNT         3957 a         4134 c         4486 g         3900 t
ORIGIN      
        1 ttagaatata tgaatgtccg atagtggatt ttatttttac aattttttgt gtttaggcat
       61 ataaaaatta acccgccatt tgaacggcgg gttaaaatat ttacaactta gcaatcaacc
      121 attaacgctt gatatcgctt ttaaagtcgc gtttttcata tcctgtatac agctgacgcg
      181 gacgggcaat cttcataccg tcactgtgca tttcgctcca gtgggcgatc cagccaacgg
      241 tacgtgccat tgcgaaaatg acggtgaaca tggaagacgg aatacccatc gctttcagga
      301 tgataccaga gtagaaatcg acgttcgggt acagtttctt ctcgataaag tacgggtcgt
      361 tcagcgcgat gttttccagc tccatagcca cttccagcag gtcatctttg gtgcccagct
      421 ctttcagaac ttcatggcag gtttcacgca ttacggtggc gcgcgggtcg taatttttgt
      481 acacgcggtg accgaagccc atcaggcgga aagaatcatt tttatctttc gcacgacgaa
      541 caaattccgg aatgtgttta acggagctaa tttcttccag cattttcagc gccgcttcgt
      601 tagcaccacc gtgcgcaggt ccccacagtg aagcaatacc tgctgcgata caggcaaacg
      661 ggttcgcacc cgaagagcca gcggtacgca cggtggaggt agaggcgttc tgttcatggt
      721 cagcgtgcag gatcagaata cggtccatag cacgttccag aatcggatta acttcatacg
      781 gttcgcacgg cgtggagaac atcatattca ggaagttacc ggcataggag agatcgttgc
      841 gcggataaac aaatggctga ccaatggaat acttgtaaca catcgcggcc atggtcggca
      901 ttttcgacag caggcggaac gcggcaattt cacgatgacg aggattgtta acatccagcg
      961 agtcgtgata gaacgccgcc agcgcgccgg taataccaca catgactgcc attggatgtg
     1021 agtcgcgacg gaaagcgtgg aacagacggg taatctgctc gtggatcatg gtatgacggg
     1081 tcaccgtagt tttaaattcg tcatactgtt cctgagtcgg tttttcacca ttcagcagga
     1141 tgtaacaaac ttccaggtag ttagaatcgg tcgccagctg atcgatcggg aaaccgcggt
     1201 gcagcaaaat accttcatca ccatcaataa aagtaatttt agattcgcag gatgcggttg
     1261 aagtgaagcc tgggtcaaag gtgaacacac cttttgaacc gagagtacgg atatcaataa
     1321 catcttgacc cagcgtgcct ttcagcacat ccagttcaac agctgtgtcc ccgttgaggg
     1381 tgagttttgc ttttgtatca gccatttaag gtctccttag cgccttattg cgtaagactg
     1441 ccggaactta aatttgcctt cgcacatcaa cctggcttta cccgtttgtt atttggctcg
     1501 ccgctctgtg aaagagggga aaacctgggt acagagctct gggcgcttgc aggtaaagga
     1561 tccattgatg acgaataaat ggcgaatcaa gtacttagca atccgaatta ttaaacttgt
     1621 ctaccactaa taactgtccc gaatgaattg gtcaatactt ccacactgtt acataagtta
     1681 atcttaggtg aaataccgac ttcataactt ttacgcatta tatgcttttc ctagtaatgt
     1741 ttgtaacaac tttgttgagt gattgtcaaa ttagatgatt aaaaattaaa taaatgttgt
     1801 tgtcgtgacc tggatcactg ttcaggataa aacccgacaa actatatgta ggttaattgt
     1861 aatgattttg tgaacagcct atactgccgc caggtctccg gaacaccctg caatcccgag
     1921 ccacccagcg ttgtaacgtg tcgttttcgc atctggaagc agtgttttgc atgacgcgca
     1981 gttatagaaa ggacgctgtc tgacccgcaa gcagaccgga ggaaggaaat cccgacgtct
     2041 ccaggtaaca gaaagttaac ctctgtgccc gtagtcccca gggaataata agaacagcat
     2101 gtgggcgtta ttcatgataa gaaatgtgaa aaaacaaaga cctgttaatc tggacctaca
     2161 gaccatccgg ttccccatca cggcgatagc gtccattctc catcgcgttt ccggtgtgat
     2221 cacctttgtt gcagtgggca tcctgctgtg gcttctgggt accagcctct cttcccctga
     2281 aggtttcgag caagcttccg cgattatggg cagcttcttc gtcaaattta tcatgtgggg
     2341 catccttacc gctctggcgt atcacgtcgt cgtaggtatt cgccacatga tgatggattt
     2401 tggctatctg gaagaaacat tcgaagcggg taaacgctcc gccaaaatct cctttgttat
     2461 tactgtcgtg ctttcacttc tcgcaggagt cctcgtatgg taagcaacgc ctccgcatta
     2521 ggacgcaatg gcgtacatga tttcatcctc gttcgcgcta ccgctatcgt cctgacgctc
     2581 tacatcattt atatggtcgg ttttttcgcc accagtggcg aactgacata tgaagtctgg
     2641 atcggtttct tcgcctctgc gttcaccaaa gtgttcaccc tgctggcgct gttttctatc
     2701 ttgattcatg cctggatcgg catgtggcag gtgttgaccg actacgttaa accgctggca
     2761 ttgcgcctga tgctgcaact ggtgattgtc gttgcactgg tggtttacgt gatttatgga
     2821 ttcgttgtgg tgtggggtgt gtgatgaaat tgccagtcag agaatttgat gcagttgtga
     2881 ttggtgccgg tggcgcaggt atgcgcgcgg cgctgcaaat ttcccagagc ggccagacct
     2941 gtgcgctgct ctctaaagtc ttcccgaccc gttcccatac cgtttctgcg caaggcggca
     3001 ttaccgttgc gctgggtaat acccatgaag ataactggga atggcatatg tacgacaccg
     3061 taaaagggtc ggactatatc ggtgaccagg acgcgattga atatatgtgt aaaaccgggc
     3121 cggaagcgat tctggaactc gaacacatgg gcctgccgtt ctcgcgtctt gatgatggtc
     3181 gtatctatca acgtccgttt ggcggtcagt cgaaaaactt cggcggcgag caggcggcac
     3241 gcactgcggc ggcggctgac cgtaccggtc acgcactgtt gcacacgctt tatcagcaga
     3301 acctgaaaaa ccacaccacc attttctccg agtggtatgc gctggatctg gtgaagaacc
     3361 aggatggcgc ggtggtgggt tgtactgcac tgtgcatcga aactggtgaa gtggtttatt
     3421 tcaaagcccg cgctaccgtg ctggcgactg gcggggcagg gcgtatttat cagtccacca
     3481 ctaacgccca cattaacact ggcgacggcg tcggcatggc tatccgcgca ggcgtaccgg
     3541 tgcaggatat ggaaatgtgg cagttccacc cgaccggtat tgccggtgcg ggcgtactgg
     3601 tcaccgaagg ttgccgtggt gaaggcggtt atctgctgaa caaacatggc gaacgcttta
     3661 tggagcgtta tgcgccgaac gccaaagacc tggcgggccg tgatgtggtg gcgcgttcca
     3721 tcatgatcga aatccgtgaa ggtcgcggct gtgatggtcc gtgggggcca cacgcgaaac
     3781 tgaaactcga ccacctgggt aaagaagttc tcgaatcccg tctgccgggc atcctggaac
     3841 tctcccgtac cttcgctcac gtcgatccgg tgaaagagcc gatcccggtt atcccaacct
     3901 gtcattacat gatgggcggt attccgacca aagtgaccgg tcaggcgctg actgtgaatg
     3961 agaaaggcga agatgtggtt gttccgggac tgtttgccgt tggtgaaatc gcttgtgtat
     4021 cggtacacgg cgctaaccgt ctgggcggca actcgctgct ggacctggtg gtctttggtc
     4081 gtgcggcagg tctgcatctg caagagtcta tcgccgagca gggcgcattg cgcgatgcca
     4141 gcgagtctga tgttgaagca tctctggatc gtctgaaccg ctggaacaat aatcgtaacg
     4201 gtgaagatcc ggtggcgatt cgtaaagcgc tgcaagaatg tatgcagcat aacttctcgg
     4261 tcttccgtga aggtgatgcg atggcgaaag ggcttgagca gttgaaagtt atccgcgagc
     4321 gtctgaaaaa tgcccgtctg gatgacactt ccagcgagtt caacacccag cgcgttgagt
     4381 gcctggaact ggataacctg atggaaacgg cgtatgcaac ggctgtttct gccaacttcc
     4441 gtaccgaaag ccgtggcgcg catagccgct tcgacttccc ggatcgtgat gatgaaaact
     4501 ggctgtgcca ctccctgtat ctgccagagt cggaatccat gacgcgccga agcgtcaaca
     4561 tggaaccgaa actgcgcccg gcattcccgc cgaagattcg tacttactaa tgcggagaca
     4621 ggaaaatgag actcgagttt tcaatttatc gctataaccc ggatgttgat gatgctccgc
     4681 gtatgcagga ttacaccctg gaagcggaag aaggtcgcga catgatgctg ctggatgcgc
     4741 ttatccagct gaaagagaaa gatcccagcc tgtcgttccg ccgctcctgt cgtgaaggtg
     4801 tgtgcggttc cgacggtctg aacatgaacg gcaagaatgg tctggcctgt attaccccga
     4861 tttcggcact caaccagccg ggcaagaaga ttgtgattcg cccgctgcca ggtttaccgg
     4921 tgatccgcga tttggtggta gacatgggac aattctatgc gcaatatgag aaaattaagc
     4981 cttacctgtt gaataatgga caaaatccgc cagctcgcga gcatttacag atgccagagc
     5041 agcgcgaaaa actcgacggg ctgtatgaat gtattctctg cgcatgttgt tcaacctctt
     5101 gtccgtcttt ctggtggaat cccgataagt ttatcggccc ggcaggcttg ttagcggcat
     5161 atcgtttcct gatcgatagc cgtgataccg agactgacag ccgcctcgac ggtttgagcg
     5221 atgcattcag cgtattccgc tgtcacagca tcatgaactg cgtcagtgta tgtccgaagg
     5281 ggctgaaccc gacgcgcgcc atcggccata tcaagtcgat gttgttgcaa cgtaatgcgt
     5341 aaaccgtagg cctgataaga cgcgcaagcg tcgcatcagg caaccagtgc cggatgcggc
     5401 gtgaacgcct tatccggcct acaagtcatt acccgtaggc ctgataagcg cagcgcatca
     5461 ggcgtaacaa agaaatgcag gaaatcttta aaaactgccc ctgacactaa gacagttttt
     5521 aaaggttcct tcgcgagcca ctacgtagac aagagctcgc aagtgaaccc cggcacgcac
     5581 atcactgtgc gtggtagtat ccacggcgaa gtaagcataa aaaagatgct taagggatca
     5641 cgatgcagaa cagcgctttg aaagcctggt tggactcttc ttacctctct ggcgcaaacc
     5701 agagctggat agaacagctc tatgaagact tcttaaccga tcctgactcg gttgacgcta
     5761 actggcgttc gacgttccag cagttacctg gtacgggagt caaaccggat caattccact
     5821 ctcaaacgcg tgaatatttc cgccgcctgg cgaaagacgc ttcacgttac tcttcaacga
     5881 tctccgaccc tgacaccaat gtgaagcagg ttaaagtcct gcagctcatt aacgcatacc
     5941 gcttccgtgg tcaccagcat gcgaatctcg atccgctggg actgtggcag caagataaag
     6001 tggccgatct ggatccgtct ttccacgatc tgaccgaagc agacttccag gaaaccttca
     6061 acgtcggttc atttgccagc ggcaaagaaa ccatgaaact cggcgagctg ctggaagccc
     6121 tcaagcaaac ctactgcggc ccgattggtg ccgagtatat gcacatcacc agcaccgaag
     6181 aaaaacgctg gatccaacag cgtatcgagt ctggtcgcgc gactttcaat agcgaagaga
     6241 aaaaacgctt cttaagcgaa ctgaccgccg ctgaaggcct tgaacgttac ctcggcgcaa
     6301 aattccctgg cgcaaaacgc ttctcgctgg aaggcggtga cgcgttaatc ccgatgctta
     6361 aagagatgat ccgccacgct ggcaacagcg gcacccgcga agtggttctc gggatggcgc
     6421 accgtggtcg tctgaacgtg ctggtgaacg tgctgggtaa aaaaccgcaa gacttgttcg
     6481 acgagttcgc cggtaaacat aaagaacacc tcggcacggg tgacgtgaaa taccacatgg
     6541 gcttctcgtc tgacttccag accgatggcg gcctggtgca cctggcgctg gcgtttaacc
     6601 cgtctcacct tgagattgta agcccggtag ttatcggttc tgttcgtgcc cgtctggaca
     6661 gacttgatga gccgagcagc aacaaagtgc tgccaatcac catccacggt gacgccgcag
     6721 tgaccgggca gggcgtggtt caggaaaccc tgaacatgtc gaaagcgcgt ggttatgaag
     6781 ttggcggtac ggtacgtatc gttatcaaca accaggttgg tttcaccacc tctaatccgc
     6841 tggatgcccg ttctacgccg tactgtactg atatcggtaa gatggttcag gccccgattt
     6901 tccacgttaa cgcggacgat ccggaagccg ttgcctttgt gacccgtctg gcgctcgatt
     6961 tccgtaacac ctttaaacgt gatgtcttca tcgacctggt gtgctaccgc cgtcacggcc
     7021 acaacgaagc cgacgagccg agcgcaaccc agccgctgat gtatcagaaa atcaaaaaac
     7081 atccgacacc gcgcaaaatc tacgctgaca agctggagca ggaaaaagtg gcgacgctgg
     7141 aagatgccac cgagatggtt aacctgtacc gcgatgcgct ggatgctggc gattgcgtag
     7201 tggcagagtg gcgtccgatg aacatgcact ctttcacctg gtcgccgtac ctcaaccacg
     7261 aatgggacga agagtacccg aacaaagttg agatgaagcg cctgcaggag ctggcgaaac
     7321 gcatcagcac ggtgccggaa gcagttgaaa tgcagtctcg cgttgccaag atttatagcg
     7381 atcgccaggc gatggctgcc ggtgagaaac tgttcgactg gggcggtgcg gaaaacctcg
     7441 cttacgccac gctggttgac gaaggcattc cggttcgcct gtcgggtgaa gactccggtc
     7501 gcggtacctt cttccaccgc cacgcggtga tccacaacca gtctaacggt tccacttaca
     7561 cgccgctgca acacatccat aacgggcagg gcgcgttccg cgtctgggac tccgtactgt
     7621 ctgaagaagc agtgctggcg tttgaatacg gttatgccac cgcagaacca cgcactctga
     7681 ccatctggga agcgcagttc ggtgacttcg ctaacggtgc tcaggtggtt atcgaccagt
     7741 tcatctcctc tggcgaacag aaatggggcc ggatgtgtgg tctggtgatg ttgctgccgc
     7801 acggttatga agggcagggg ccggagcact cctccgcgcg tctggaacgt tatctgcaac
     7861 tttgtgctga gcaaaacatg caggtgtgcg taccgtctac cccggcacag gtttaccaca
     7921 tgctgcgtcg tcaggcgctg cgcgggatgc gtcgtccgct ggtcgtgatg tcgccgaaat
     7981 ccctgctgcg tcatccgctg gcggtttcca gcctcgaaga actggcgaac ggcaccttcc
     8041 tgccagccat cggtgaaatc gacgagcttg atccgaaggg cgtgaagcgc gtagtgatgt
     8101 gttctggtaa ggtttattac gacctgctgg aacagcgtcg taagaacaat caacacgatg
     8161 tcgccattgt gcgtatcgag caactctacc cgttcccgca taaagcgatg caggaagtgt
     8221 tgcagcagtt tgctcacgtc aaggattttg tctggtgcca ggaagagccg ctcaaccagg
     8281 gcgcatggta ctgcagccag catcatttcc gtgaagtgat tccgtttggg gcttctctgc
     8341 gttatgcagg ccgcccggcc tccgcctctc cggcggtagg gtatatgtcc gttcaccaga
     8401 aacagcaaca agatctggtt aatgacgcgc tgaacgtcga ataaataaag gatacacaat
     8461 gagtagcgta gatattctgg tccctgacct gcctgaatcc gtagccgatg ccaccgtcgc
     8521 aacctggcat aaaaaacccg gcgacgcagt cgtacgtgat gaagtgctgg tagaaatcga
     8581 aactgacaaa gtggtactgg aagtaccggc atcagcagac ggcattctgg atgcggttct
     8641 ggaagatgaa ggtacaaccg taacgtctcg tcagatcctt ggtcgcctgc gtgaaggcaa
     8701 cagcgccggt aaagaaacca gcgccaaatc tgaagagaaa gcgtccactc cggcgcaacg
     8761 ccagcaggcg tctctggaag agcaaaacaa cgatgcgtta agcccggcga tccgtcgctt
     8821 gctggctgaa cataacctcg acgccagcgc tattaaaggc accggcgtgg gtggtcgtct
     8881 gacccgtgaa gatgtggaaa aacatctggc gaaatccccg gcgaaagagt ctgcaccggc
     8941 agcggctgct ccggcggcgc aaccggctct ggctgcacgt agtgaaaaac gtgtcccgat
     9001 gactcgcctg cgtaagcgtg tggcagagcg tctgctggaa gcgaaaaact ccaccgccat
     9061 gctgaccacg ttcaacgaag tcaacatgaa gccgattatg gatctgcgta agcagtacgg
     9121 tgaagcgttt gaaaaacgcc acggcatccg tctgggcttt atgtccttct acgtgaaagc
     9181 ggtggttgaa gccctgaaac gttacccgga agtgaatgct tctatcgacg gcgatgacgt
     9241 ggtttaccac aactatttcg acgtcagcat ggcggtttct acgccgcgcg gcctggtgac
     9301 gccggttctg cgtgatgtcg ataccctcgg catggcagac atcgagaaga aaatcaaaga
     9361 gctggcagtc aaaggccgtg atggcaagct gaccgttgaa gatctgaccg gtggtaactt
     9421 caccatcacc aacggtggtg tgttcggttc cctgatgtct acgccgatca tcaacccgcc
     9481 gcagagcgca attctgggta tgcacgctat caaagatcgt ccgatggcgg tgaatggtca
     9541 ggttgagatc ctgccgatga tgtacctggc gctgtcctac gatcaccgtc tgatcgatgg
     9601 tcgcgaatcc gtgggcttcc tgataacgat caaagagttg ctggaagatc cgacgcgtct
     9661 gctgctggac gtgtagtagt ttaagtttca cctgcactgt agacaggata aggcattatc
     9721 gccttctccg gcaattgaag cctgatgcga cgcttaacgc gtcttatcag gcctacggga
     9781 agcaccaatg taggtcggat aaggcgcttg cgccgcatcc gacaagcgat gcctgatgcg
     9841 acacttacgc gtcttatcag gcctacaggt gaccgacaat gcccggaggc gatacgaaat
     9901 attcggtcta cggtttaaaa gataacgatt actgaaggat ggacagaaca catgaactta
     9961 catgaatatc aggcaaaaca actttttgcc cgctatggct taccagcacc ggtgggttat
    10021 gcctgtacta ctccgcgcga agcagaagaa gccgcttcaa aaatcggtgc cggtccgtgg
    10081 gtagtgaaat gtcaggttca cgctggtggc cgcggtaaag cgggcggtgt gaaagttgta
    10141 aacagcaaag aagacatccg tgcttttgca gaaaattggc tcggcaagcg tctggtaacg
    10201 tatcaaacag atgccaatgg ccaaccggtt aaccagattc tggttgaagc agcgaccgat
    10261 atcgctaaag agctgtatct cggtgccgtt gtagaccgta gttcccgtcg tgtggtcttt
    10321 atggcctcca ctgaaggcgg cgtggaaatc gaaaaagtgg cggaagaaac tccgcagctg
    10381 atccataaag ttgcgcttga tccgctgaca ggcccgatgc cgtatcaggg acgcgagctg
    10441 gcgttcaaac tgggtctgga aggtaaactg gttcagcagt tcaccaaaat cttcatgggt
    10501 ctggcgacca ttttcctgga gcgcgacctg gcgttgatcg aaatcaaccc gctggtcatc
    10561 accaaacagg gtgatctgat ttgcctcgac ggcaaactgg gcgctgatgg caacgcactg
    10621 ttccgccagc ttgatctgcg cgaaatgcgt gaccagtcgc aggaagatcc gcgtgaagca
    10681 caggctgcac agtgggaact gaactacgtt gcgctggacg gtaacatcgg ttgtatggtt
    10741 aacggcgcag gtctggcgat gggtacgatg gacatcgtta aactgcacgg cggcgaaccg
    10801 gctaacttcc ttgacgttgg cggcggtgca accaaagaac gtgtaaccga agcgttcaaa
    10861 atcatcctct ctgacgacaa agtgaaagtc gttctggtta acatcttcgg cggtatcgtt
    10921 cgttgcgacc tgatcgctga cggtatcatc ggcgcggtag cagaagtggg tgttaacgta
    10981 ccggtcgtgg tacgtctgga aggtaacaac gccgaactcg gcgcgaagaa actggctgac
    11041 agcggcctga atattattgc agcaaaaggt ctgacggatg cagctcagca ggttgttgcc
    11101 gcagtggagg ggaaataatg tccattttaa ttgataaaaa caccaaggtt atctgccagg
    11161 gctttactgg tagccagggg actttccact cagaacaggc cattgcatac ggcactaaaa
    11221 tggttggcgg cgtaacccca ggtaaaggcg gtactaccca cctcggcctg ccggtgttca
    11281 acaccgtgcg tgaagctgtt gctgctactg gcgctaccgc ttctgttatc tacgtaccag
    11341 caccgttctg caaagactcc attctggaag ctattgatgc aggcatcaaa ctgattatca
    11401 ccatcactga aggcatcccg acgctggata tgctgactgt gaaagtgaaa ctggacgaag
    11461 ccggcgttcg tatgatcggc ccgaactgcc cgggcgttat cactccgggt gaatgcaaaa
    11521 tcggtatcca gccgggtcac attcacaaac cgggtaaagt gggtatcgtt tcccgttccg
    11581 gtacactgac ctatgaagcg gttaaacaga ccacggatta cggtttcggt cagtcgacct
    11641 gtgttggtat cggcggtgac ccgatcccag gctctaactt tatcgacatc ctcgaaatgt
    11701 tcgaaaaaga tccgcagacc gaagcgatcg tgatgatcgg tgagatcggc ggtagcgctg
    11761 aagaagaagc ggcagcgtac atcaaagagc acgttaccaa gccagttgta ggttacatcg
    11821 ctggtgtgac tgcgccgaaa ggcaaacgta tgggccacgc gggtgcgatc attgccggtg
    11881 ggaaagggac tgcggatgag aaattcgctg ctctggaagc cgcaggcgtg aaaaccgttc
    11941 gcagcctggc ggatatcggt gaagcactga aaactgttct gaaataaata tctgtaataa
    12001 gaaatagccc tcgccgcttc cctctacagg aatggcgaag ggctgtcggt ttcgacatgg
    12061 ttggccatcg tatgatggcc ttttttgtgc ttatcgcgat gattttcgct gcgctatcag
    12121 ggtaaattta tagtcatcgg tattaaaagc gttgcggcta tattcaaaca cccgaccatc
    12181 aactaaatat ccacgcgata ctttttcaag aatcggcttt gtctggctga tattaagcag
    12241 acggctcatc tcttcggttg gcatcagagg aatgatttcc tgttcgctac gatcgataac
    12301 catcttcttc acttcttcaa taaagtgata tttcgaattt tccatgacct gccaggtgag
    12361 atccgggaac aacgcaagcg gcatccaggt ttcttccagc gccattggct tttgcttgcg
    12421 atagcgcacg cgcttcacat gccacacacg atcctgcgcg gtgatttgta gctgttgctg
    12481 aagaaaatcg tcagccggaa tcacttcaaa tatcaggact tcactgtgtg tatcgacgtg
    12541 acggtccgac agtttttcat caaaactggt taactgaaaa atatcgtaat tgacccgctc
    12601 ttctttgacg taagtcccgc tgccctgaat gctttcgagg atctgctgct cgactagctg
    12661 gcgcaaagcc tgacgcaccg taacccggct gacgccaaac tctgtttgta gcgctgattc
    12721 agtgggtaac gcatcgccag gtttaagctc gccacgcgca atttgttcac gaatgcgatc
    12781 ggcaatctgc cggtataagg gcttgtgtcc catttttagt atctcattaa tacgaattta
    12841 gccattatgc ccgataaatt catcctgtaa ataatgcaaa tacaatacaa ataatttcaa
    12901 tcaagtgaaa ttgatcatat aatggtattg ttttatcggg cacactggcg cgactataaa
    12961 aacgatcaag tgaggatcat gatgaatctg acgactctga cccaccgcga tgcgttgcgt
    13021 ctgaatgcgc gctttaccag ccgtgaagag gccatccacg cgttgactca acgtcttgct
    13081 gctctgggga aaatttccag tactgagcaa tttctggaag aagtgtatcg ccgtgaaagc
    13141 cttggcccga ccgccttagg tgaagggttg gctgtgccgc atggcaaaac tgctgcggta
    13201 aaagaagcgg cgtttgcggt cgccacactc agcgagccgc ttcagtggga aggcgttgat
    13261 ggcccggaag cagttgattt agtggtgctg ctggcgattc cccccaatga agcgggtact
    13321 atgcatatgc aactgctgac agcgctgacc acgcgccttg cggatgatga gattcgggcg
    13381 cgtatacagt cggcgacgac gcctgatgag ttgctctcgg cgctggatga caagggaggc
    13441 acgcaacctt ctgcctcttt ttccaacgcg ccaactatcg tctgcgtacc ggcctgtccg
    13501 gcgggtattg ctcacaccta tatggctgcg gaatatctgg aaaaagccgg acgcaaactc
    13561 ggcgtaaatg tttacgttga aaaacaaggc gctaacggca ttgaagggcg tttaacggcg
    13621 gatcaactca atagtgcaac cgcctgtatt tttgcggctg aagtcgccat caaggagagt
    13681 gagcgtttta atggcattcc cgcgctttca gtgcctgttg ccgagccgat tcgccatgca
    13741 gaagcgttga tccaacaagc gcttaccctc aagcgtagcg atgagacgcg taccgtacag
    13801 caagatacgc aaccggtgaa aagtgtcaaa acggagctga aacaggcact gttgagcgga
    13861 atctcttttg ccgtaccgtt gattgtcgcg gggggcacgg tgctggcggt cgcggtatta
    13921 ctgtcgcaaa tcttcgggct acaagatctg tttaatgaag aaaactcctg gctgtggatg
    13981 taccgcaagc tgggcggcgg gctgctcgga attttgatgg taccggtgct cgcggcctat
    14041 accgcctatt ctctggcaga taaaccggcg ttagcgccag gctttgcggc tggacttgcc
    14101 gccaacatga tcggctccgg gtttctcggc gcggtcgttg gcggattgat agccggttac
    14161 ttgatgcgct gggtgaaaaa tcacttgcgt cttagcagta aattcaatgg attcctgact
    14221 ttttatctct acccggtgct cggtacgttg ggagcgggca gtctgatgct gtttgtggtg
    14281 ggagaacctg tcgcatggat caataactcg cttaccgcct ggctgaacgg tctgtcagga
    14341 agtaacgcgc tgttgctggg tgccattttc ggttttatgt gttcctttga tcttggaggg
    14401 ccagtgaaca aagccgctta tgcattctgc ctgggcgcaa tggtgaacgg cgtttacggc
    14461 ccgtatgcca ttttcgcctc cgtcaaaatg gtttcggcat ttaccgtaac cgcttccacg
    14521 atgctcgcac cgcgcctgtt taaagagttt gaaattgaga ccgggaaatc cacctggctg
    14581 ttagggctgg taggtattac cgaaggggcg atcccgatgg cgattgaaga tccgctgcgg
    14641 gttattggtt cgtttgtgct gggctctatg gtaacgggcg ctattgtcgg tgcgatgaat
    14701 atcggccttt cgacacccgg tgccggcatt ttctcgctct ttttacttca tgataatggc
    14761 gcgggcggtg ttatggcggc aattggctgg tttggtgcgg cattggtggg ggctgcaatc
    14821 tcgactgcaa ttctcctgat ctggcggcgt cacgcggtta agcatggcaa ctatctgact
    14881 gatggcgtaa tgccataaac aaaaaggaaa cgacgatgaa agcggtatct cgcgttcaca
    14941 tcaccccgca tatgcactgg gatcgagagt ggtatttcac caccgaagag tcacgtattc
    15001 tgctggtcaa taatatggaa gagatcctgt gccgactgga acaggacaac gaatacaaat
    15061 attacgtact cgacgggcaa acggcgatcc tcgaagatta tttcgcggtg aaaccggaaa
    15121 acaaagaccg tgtgaagaaa caggtagaag ccggcaagtt gattatcggc ccctggtata
    15181 cccagaccga taccacgatt gtttctgcgg aatccatcgt ccgtaatctg atgtacggaa
    15241 tgcgtgactg cctcgcgttt ggcgagccga tgaaaatagg ttatttacca gattcctttg
    15301 gcatgtccgg gcaactgccg catatctaca atggatttgg cattacccgc accatgttct
    15361 ggcgcggatg ttcggagcgc cacggtactg ataaaaccga gtttttgtgg caaagcagtg
    15421 acggtagcga agtgacggcg caggtgctgc cgctgggcta cgccataggt aagtacttac
    15481 ctaccgacga aaacggatta cgtaaacgcc tcgacagtta ttttgacgtg ctggaaaaag
    15541 cgtctgtaac caaagagatt ttgctgccga atggtcatga ccagatgcca ttgcagcaaa
    15601 atatcttcga agtgatggat aagctacgtg agatctaccc tcaacgtaag tttgtgatga
    15661 gccgctttga agaggtattt gagaagatcg aagcgcagcg tgaaagtctg gccaccctga
    15721 aaggtgaatt tatcgatggc aaatatatgc gcgtacatcg caccatcggt tccacgcgca
    15781 tggatatcaa aattgcccac gcacgtattg aaaataagat tgttaatctg ctggaaccgc
    15841 tggcaacgct ggcctggacg ttgggttttg aataccacca cggcttgctg gagaaaatgt
    15901 ggaaagagat cttaaaaaat catgcccacg acagtatcgg ttgttgttgc agtgacaaag
    15961 ttcatcgcga aattgtcgcc cgcttcgaac tggctgaaga catggcggat aatctgctgc
    16021 gtttctacat gcgcaaaatt gccgataaca tgccacagag tgatgccgac aaactcgtgc
    16081 tgtttaacct gatgccctgg ccgcgggaag aagttattaa caccactgtg cggctgcgcg
    16141 ccagccagtt taatctacga gacgatcgcg gtcagcctgt accgtatttt attcgccatg
    16201 cccgtgagat cgatccaggc ctaatcgatc ggcaaatagt tcattacggt aattacgatc
    16261 cctttatgga gtttgatata cagatcaacc agattgtccc ttctatgggc tatcgcacgc
    16321 tttatatcga agcgaatcag cctggcaacg tgattgcggc aaaaagtgac gctgaaggga
    16381 tactggaaaa tgctttctgg caaattgcgc tcaatgagga tggttctctg caactggtag
    16441 ataaagacag cggtgtgcgc tatgaccgag tattgca
//
LOCUS       DAJVUK010000096        16469 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.096, whole genome shotgun sequence.
ACCESSION   DAJVUK010000096 DAJVUK010000000
VERSION     DAJVUK010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16469
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.096"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..2077)
                     /locus_tag="OQQ57_002736"
     CDS             complement(<1..2077)
                     /locus_tag="OQQ57_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HCS1957442.1"
                     /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL
                     AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA
                     ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA
                     DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS
                     WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN
                     YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL
                     PNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK
                     LYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET
                     LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA
                     QPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH
                     PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM
                     YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS
                     ITDLAKAKSL"
     gene            complement(2286..2361)
                     /locus_tag="OQQ57_002737"
     tRNA            complement(2286..2361)
                     /locus_tag="OQQ57_002737"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2326..2328),aa:Ala,seq:ggc)
     gene            complement(2401..2476)
                     /locus_tag="OQQ57_002738"
     tRNA            complement(2401..2476)
                     /locus_tag="OQQ57_002738"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2441..2443),aa:Ala,seq:ggc)
     gene            2697..3056
                     /locus_tag="OQQ57_002739"
     CDS             2697..3056
                     /locus_tag="OQQ57_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HCS1957443.1"
                     /translation="MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKA
                     RLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLL
                     REGIIGLLQRLGIRDSK"
     gene            3058..3450
                     /locus_tag="OQQ57_002740"
     CDS             3058..3450
                     /locus_tag="OQQ57_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416898.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HCS1957444.1"
                     /translation="MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGG
                     RARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGVRAPAYRQIINAIDNMTD
                     IEQEKVAQFLSREGIRNFLARLDIDESA"
     gene            complement(3501..4916)
                     /gene="gltX"
                     /locus_tag="OQQ57_002741"
     CDS             complement(3501..4916)
                     /gene="gltX"
                     /locus_tag="OQQ57_002741"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HCS1957445.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGR
                     TRSIERINKALAFIAERENQQ"
     gene            5176..5251
                     /locus_tag="OQQ57_002742"
     tRNA            5176..5251
                     /locus_tag="OQQ57_002742"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5209..5211,aa:Val,seq:tac)
     gene            5296..5371
                     /locus_tag="OQQ57_002743"
     tRNA            5296..5371
                     /locus_tag="OQQ57_002743"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5329..5331,aa:Val,seq:tac)
     gene            5418..5493
                     /locus_tag="OQQ57_002744"
     tRNA            5418..5493
                     /locus_tag="OQQ57_002744"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5451..5453,aa:Val,seq:tac)
     gene            5498..5573
                     /locus_tag="OQQ57_002745"
     tRNA            5498..5573
                     /locus_tag="OQQ57_002745"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5531..5533,aa:Lys,seq:ttt)
     gene            5693..6034
                     /locus_tag="OQQ57_002746"
     CDS             5693..6034
                     /locus_tag="OQQ57_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlxA-like family protein"
                     /protein_id="HCS1957446.1"
                     /translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
                     KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQKQQAEKAQEKEQRLSLDVSLLNP
                     VEKTTHIDIYI"
     gene            complement(6025..6951)
                     /locus_tag="OQQ57_002747"
     CDS             complement(6025..6951)
                     /locus_tag="OQQ57_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1957447.1"
                     /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
                     TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
                     ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
                     AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
                     IVQEIGHPATLFPMVAAGIGISILPALALLLPEGSPLVVKRITPVVERQLMLVRRKNR
                     SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
     gene            7041..8039
                     /locus_tag="OQQ57_002748"
     CDS             7041..8039
                     /locus_tag="OQQ57_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HCS1957448.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCTLPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
     gene            complement(8036..8254)
                     /locus_tag="OQQ57_002749"
     CDS             complement(8036..8254)
                     /locus_tag="OQQ57_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3820 family protein"
                     /protein_id="HCS1957449.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(8256..10271)
                     /gene="ligA"
                     /locus_tag="OQQ57_002750"
     CDS             complement(8256..10271)
                     /gene="ligA"
                     /locus_tag="OQQ57_002750"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HCS1957450.1"
                     /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            complement(10342..11328)
                     /gene="zipA"
                     /locus_tag="OQQ57_002751"
     CDS             complement(10342..11328)
                     /gene="zipA"
                     /locus_tag="OQQ57_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HCS1957451.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPVYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            11558..12319
                     /gene="cysZ"
                     /locus_tag="OQQ57_002752"
     CDS             11558..12319
                     /gene="cysZ"
                     /locus_tag="OQQ57_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HCS1957452.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
     gene            12504..13475
                     /gene="cysK"
                     /locus_tag="OQQ57_002753"
     CDS             12504..13475
                     /gene="cysK"
                     /locus_tag="OQQ57_002753"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HCS1957453.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            13859..14116
                     /gene="ptsH"
                     /locus_tag="OQQ57_002754"
     CDS             13859..14116
                     /gene="ptsH"
                     /locus_tag="OQQ57_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HCS1957454.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            14161..15888
                     /gene="ptsI"
                     /locus_tag="OQQ57_002755"
     CDS             14161..15888
                     /gene="ptsI"
                     /locus_tag="OQQ57_002755"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HCS1957455.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            15929..16438
                     /gene="crr"
                     /locus_tag="OQQ57_002756"
     CDS             15929..16438
                     /gene="crr"
                     /locus_tag="OQQ57_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCS1957456.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLPGSVTVG
                     ETPVIRIKK"
BASE COUNT         4165 a         4231 c         4045 g         4028 t
ORIGIN      
        1 tcaatgactt cgctttcgcc agatcggtaa ttgatctcac aatcatcgca tccagcgtgt
       61 tcgtgacaat atctttcaca aagacgccat caattttgat gatatcagcc tgcaaacgct
      121 ttaaccgttc gtagttggca tagccggtgc caaagtcatc aatcgcaatc cggaaaccaa
      181 acttatgcag ctgctcgatg ttgtacatgc tgctttctgc gttagaaaac gcctgctcct
      241 cggtgatctc aagaatgacc gcctgcgggg agatgtgata acgcttaaac agacgaataa
      301 tccgcccggc aatattcttt tgcagcagcg tgagcggcat taaattgact gaaaagcgcg
      361 gtcctttttt gtcgcaaggg tgtgttgcca gccacttcaa caaggattcc agcacttgca
      421 aatcaaaacg cgcgctaagg ttaaactgag caataagggg cagaaactta tccggggtca
      481 taatgccgcc gtcatatttc agtcgcgcga ggatctcatc ataaccttca ccctctttgt
      541 tgcgaattgg ctgggcgtag agcagcaaat caccctgatc taacgccgtg cgaatggtat
      601 tcagcaatag cacctgttta gtggtctgcc cggaaaccat ctcctctctg ctatccagcg
      661 ccagcacatg atgatgtgcg caggattgct ccgccagcca gcttaactgc cccaacaagg
      721 gttgcagggt ttcctgattt ccatcaaaac gcccccaggc agcaccatag cccatatcca
      781 gcccggtatt gttccagtga atttgccgac tattcaggat gttaaccata tgctggagtc
      841 gcccttccgt ttccggcccg ctcagcacta acagcagttc actacccggc aattgataca
      901 acttttcgtt ttcctgcatc aacggcagca gcgtacggca aattgagcgg atacagtgaa
      961 cgcgcatcat taagccgtaa tgacgactca taaactcaag attatcaatg cgcaggcagc
     1021 aaaaactctt gcccgcctct tgctccggcg cttgttccaa cgcacggaag ttgggcagga
     1081 gcgttaacgg atcggtcagc gcctgcaaat gccagcggcg attaagccat tcactgcgat
     1141 gataaatgcg caccatatag agcaggcaaa cgctaaagga aatcagcacc gcaagaataa
     1201 atgccagcga atattcggtt tccacccctt gcaaaaagtt ctggttgtaa ttcagaaggc
     1261 aaagcgttga aacagcccag gtgagattta aaaacggata gcgaagctta ccgaccccga
     1321 gggtaaagat gatgaagaaa acgggtacca ggtaaccggc aataaagtcg ttttcataag
     1381 gtgtgcacaa cagaagtaga agcacgctta acgctgccag ccagcttaag gtaaatgcgc
     1441 gtttctcttt gcccaacgac ggcgcgatat ccctgcgcca caatatctgc gcaaagtggg
     1501 gacttacaat catgcgagtg agatagtaga aaagcatgtt gtaaatcagc acagcggtga
     1561 aaaggcttag caaatcaacg accgtgaaaa tggcatccgc atcgccgaaa aaggtggata
     1621 tctttagcgg gaaatcaaag aagctcccca caagatacat gctgcatttg atgccgatcg
     1681 gcgtcaccaa accaagccag aacagacgtt gccagacata tcggctggtc aatccataac
     1741 gccaacgcgt ccccagctgc cagcgtaata ttgcgcaggc acacaacacg acaaacgtct
     1801 ggctaccgag catgaccgca gtctgtaaaa aagagagatg aaagttccac agattggtgc
     1861 aaaacatccc gcataaaacg ggaacgacac ctcgccagcc aaagataaac aagattgaca
     1921 gcattacgca cagtggcatc cacgccagaa agatataact ggaatggata atggcaagtg
     1981 gcgaaataaa acgggatagc tgaataagta ccacggtgag cgtaaacgct agtgtgaata
     2041 tcttgatatt ttttatcagg ttatgctcca caaacatgag tacactactc tcactgatcg
     2101 gagttttcag gcacacaaat aataagttta ttcgcatcgc gaagcaaaca gggggccagc
     2161 ctgttgccga tttttcatcc aatgatgctt tcaccaggcg gcactaaccc ggacgtagac
     2221 tgtattacaa aagcggcaaa aagcagagac aaaaaacccc cgctttgcag cgagggttgg
     2281 aaatttggtg gagctaagcg ggatcgaacc gctgacctct tgcatgccat gcaagcgctc
     2341 tcccagctga gctatagccc cacgatgcgt ttacgtacca aatttgctgg gtgcaaaatt
     2401 tggtggagct aagcgggatc gaaccgctga cctcttgcat gccatgcaag cgctctccca
     2461 gctgagctat agccccgtca cgtaaagctt gtcgagttga cgggcggcat catatgaatt
     2521 ccgcccgaat gtgtcaacgg caaattgcaa cgtgtagttt caatcgctga aaaatcaggc
     2581 aaatgaacaa ttttggaaaa ccgctcgcat tcagtagtta ttcatgtcac ggtttcctgt
     2641 aaagtggtgt tataaaatga actactaata gacccacata cattcaggga attgttatgt
     2701 tcaaggagag gatgacacca gatgaacttg ccagactgac cggctatagc cgccagacca
     2761 ttaataaatg ggtacgcaag gaaggctgga caacgtcacc aaaacctggc gtccagggtg
     2821 gcaaagcccg actggttcac gtcaatgaac aggttcgtga atatattcgc aatgctgaac
     2881 gtccagaagg tcagggagaa gcgcctgccc tttctggtga tgcgccgctt gaagtattgc
     2941 tggtgacact ggcgaaagag atgacgccag ttgaacaaaa acagtttaca tccttgcttc
     3001 tgcgggaagg gattatcgga ttgttacaac gcttagggat tcgcgatagc aaataatatg
     3061 aaaagattac gcaataaaat gaccaccgaa gaactggctg aatgcctcgg tgtggctaaa
     3121 caaactgtta accgttggat cagagaaaaa ggctggaaaa cggaaaaatt tcccggcgtg
     3181 aaaggcggtc gtgccagact tattctggtc gatacgcaag tttgcgagtt tattcagaac
     3241 acgccagcct tccataacac accaatgttg atggaagctg aagagagaat tgctgaatac
     3301 gctcctggag tacgcgcccc ggcgtatcga caaatcatca acgcgataga taatatgaca
     3361 gacattgagc aggaaaaagt cgcgcaattt ttgtcacgtg aaggaattcg caatttcctc
     3421 gcccgtctcg atattgacga atcagcataa ataaaaaacg gcaggatatt atctcctgcc
     3481 gtttatcttt tatgcgctaa ttactgctgg ttttcgcgtt cagcaataaa agccagcgct
     3541 ttgttgatac gctcaatact gcgggtccta ccaattgcgt gaacggtaac atccagtgcc
     3601 ggagactgcc ccgcaccggt tacggcgaca cgcagcggca taccaacttt acccataccc
     3661 acttccagct catccgccgt cgcctgaata gcgtgatgaa cgttttcagc ggtccagtca
     3721 gtaatcgcgg ccagtttgtc acgaaccact tccagcggct gacgcgctac cggacgcaga
     3781 tgttttttcg cggcgtcggc atcgaactca gcaaaatctt cgtagaaata acggcagctc
     3841 tgtgccatct ctttcagcgt cttgcagcgt tcgcccagca gtttcaccag atcagccagc
     3901 tgcgggccgt tacgggtatc gatattttcc tgctcaatgt gccactgtaa gtgagtagca
     3961 acatactccg gcggcagcgc gttaatgtag tgatggttca gccacagcag cttgtcggtg
     4021 ttgaacgcac tggcagattt gctgacggca ttcagggtga agtatttgat catctcttca
     4081 cgagtgaaga tttcctgatc gccgtgggac cagcccagac gcaccagata gttcagcagt
     4141 gcttctggca aataaccgtc atcacgatac tgcattacgc tgaccgcccc gtgacgtttg
     4201 gacagttttt taccgtcatc gccgttgatc atagaaacgt gcgcgtaaac cggcaccggc
     4261 gctttcaggg ccttaagaat gttgatctgg cgtggcgtgt tgttgatatg gtcttcgcca
     4321 cggataacgt gggtgatttc catatcccag tcatcgacaa ccacacagaa gttataggtt
     4381 ggggaaccat cggtacggcg aataataaga tcgtccagtt cctggttgct gaactcgatc
     4441 ggaccacgga tctgatcgtc aaaaacaaca gaaccttcct gcgggttagc aaaacgtaca
     4501 acgcacggtt catcatcagc gtgatgctca tggctgtggc ggcagcgacc gtcataacgc
     4561 ggcttctcac ctttcgccat ttgctcttcg cgcagcgctt ccaggcgctc tttagagcaa
     4621 tagcatttat aagcagtgcc ctcttccagc atctgatcga tcaccgcgtt gtagcgatca
     4681 aaacgtttgg tctggtagta cggaccttca tcccactcca ggctcagcca gttcatgcca
     4741 tccataatgg cttcgatagc ttccggcgtg gaacgctcaa gatcggtgtc ttcaatacgc
     4801 agcacgaact caccgccgtg gttacgtgca aaaagccagg agtaaagggc agtacgcgcg
     4861 ccgccaacgt gcagatagcc tgttgggctt ggcgcgaagc gagttttgat tttcatgaaa
     4921 tggccttacg tttagaaaga tgccgacaac cggcaaatcc tggaaaaatt gagtgggcga
     4981 tattctatca ctcccgcctg attcctcaat gtagttcggg tttctacctt acgcattatt
     5041 gttttcgttg acaaattgcg caacacggtc tattttgcga tcatcttgct taaatttacg
     5101 acgaacgaac aatttcttta gaaaatgcgt tgactcattt tgaactctcc ctataatgcg
     5161 actccacaca gcggggggtg attagctcag ctgggagagc acctccctta caaggagggg
     5221 gtcggcggtt cgatcccgtc atcacccacc aactacttta tgtagtctcc gccgtgtagc
     5281 aagaaattga gaagtgggtg attagctcag ctgggagagc acctccctta caaggagggg
     5341 gtcggcggtt cgatcccgtc atcacccacc actttctcac cagctaaatt tcttgtaaca
     5401 atgtgaagta ccgaagtggg tgattagctc agctgggaga gcacctccct tacaaggagg
     5461 gggtcggcgg ttcgatcccg tcatcaccca ccacttcggg tcgttagctc agttggtaga
     5521 gcagttgact tttaatcaat tggtcgcagg ttcgaatcct gcacgaccca ccaatgtaaa
     5581 aaagcgccct aaaggcgctt ttttgctatc tgcgatttgt aagattgatt tttcttctca
     5641 agttccttgt tcttctaccg atattacctc gtacagtgac gaggactgaa caatggccac
     5701 tatctcttca acttcaattc cttccataca aacacagagt agtaacaggg catcacaagg
     5761 tagcgatgtt gcttcacaaa tcgcgcggat aagtcagcaa atcatcaaac tcactcaaca
     5821 aattaaagag attgtagaca ctagcggcag tgctgaagac aagcaaaaac aggccgaatt
     5881 gattcaacag caaatcaccc tactggaaac acaactggcg cagttgcaga aacagcaggc
     5941 agaaaaggcg caggagaaag agcagcgttt gtctctggat gtatcccttc taaatcctgt
     6001 tgaaaaaacg actcatatcg atatctatat ctgatacaac ggatcccctt cccgaccagc
     6061 cattagcgca ttgccctggt ctcgtaccac gtcccataac gcttcagcgg cggtggaaag
     6121 tgaacggttc ttcctgcgca ccagcatcaa ctggcgttca acaaccggcg taatgcgctt
     6181 taccaccagt gggctacctt caggcaatag tagcgccagt gcgggaagaa tactgatgcc
     6241 gatgcctgcg gctaccatcg ggaacagcgt cgccggatgt ccaatctcct gcacaatatt
     6301 cgcctgaata ccattgcgcg ccagcgctgc gtcaatcagc ggtcggctgc ctgacgcgta
     6361 atcctgcaac accaatttcg ctccctgtaa tgcctgccag ggtacataat cttccacggc
     6421 caaagcgcta tcgcgatggc aaagcagaaa gaaaggctcg gaaagaatcg cttcacattg
     6481 cagatcgccc actgggcctg gatcgatgac gatgccaaag tcgacatctc cctggcgaat
     6541 actttccatc acccactgct gcggacgatc gtgcaggaca aactgaatat ctggatagcg
     6601 gcgatggctt tcagcaatgc attgcggaat aagatgcgcg gaaatggtct ggctggcagc
     6661 gacccgaact tttccgctca gttgttgccc catacgcccg gtatcgcgca acgtgctgtt
     6721 aagttcatcc agcagtcgct caagacgcaa agccaactgc tgccctgcat ctgtaagcac
     6781 cacttcacgc gtggttctgt ccagcaggcg aacaccagta tgattttcca gctccttcac
     6841 actgtgactt actgccgact ggctcaagcc gatacgctct cctgcacgac taaaactttt
     6901 ctcctgcgct actgtgacga aaacctttaa ttgttttaaa gaataattca tctgttttct
     6961 tcatgaatgg atgcaataaa tcaattttat ttctcaaact ggaagaagca caatagaacc
     7021 atcgatcatc tggagtcttt atgaaacttt ttcgtatcct cgatcctttc accttaaccc
     7081 tgatcacggt ggtgttgctg gcctctttct ttccggccag aggcgatttc gtccccttct
     7141 ttgaaaatct gaccaccgca gctattgccc tgctgttctt tatgcacggc gcgaagttgt
     7201 cgcgtgaggc gattattgct ggcggtggtc actggcgact gcatttgtgg gtaatgtgca
     7261 gcaccttcgt gctgtttccg attctgggtg tactgtttgc ctggtggaaa ccggtaaatg
     7321 tcgacccgat gctctactcc ggttttctct acttgtgcac tctcccggct accgtgcagt
     7381 ctgcaatcgc cttcacgtca atggcgggcg gtaacgtcgc ggcggcggtt tgttctgcgt
     7441 cagcatccag cctgctggga attttccttt caccattgct ggttggtctg gtgatgaatg
     7501 ttcacggtgc agggggcagc cttgagcagg tcggtaaaat tatgctgcaa ctgctgctgc
     7561 cgtttgtgtt ggggcatctt tcccggccgt ggattggtga ctgggtgtcg cgcaataaaa
     7621 aatggattgc gaaaactgac cagacgtcca ttctgttggt ggtttataca gcgttcagcg
     7681 aagccgtcgt taatggtatc tggcataaag ttggctgggg atcattgctg tttatcgtgg
     7741 tggtcagctg cgttcttctg gctatcgtga ttgtagttaa cgtctttatg gcacgccgac
     7801 tgggcttcaa taaggcagat gaaattacta tcgtcttttg tggttcgaaa aagagtctgg
     7861 caaatggcat cccgatggca aacattctgt tccccacatc ggtgatcggt atgatggtgc
     7921 tgcccctgat gattttccat cagatccaat tgatggtctg tgcggtgctg gcgcgtcgat
     7981 acaaacgcca gaccgaacag ttacaggcgc agcaggaaag cagcgccgat aaagcttaaa
     8041 gcggacgctt caggggctgg accagttgcg tcagcccctc ggttttaatc agcagcgtga
     8101 tttgcattag ctcaccgagc ttccctgccg ggaactcatc tttgcgggca aaccacagca
     8161 gatactcctc cggcaggtcg attaagcgac gccctttgta tttgccaaac ggcattatcg
     8221 tattggctat ttcaatcagc tgctcttttt ccatctcagc tacccagcaa acgcagcatt
     8281 tccgcttcgt cgatgacttc aatgcccagt tcctgcgcct tcgccagttt agatcctgca
     8341 gcttcacccg caatcaccag atcggttttc ttcgacacgc tgcccgcgac tttcgcgccc
     8401 agttcgacca gtcgagcttt agcgtcatca cgcgacatct ggcttaagct gcccgtaagc
     8461 accacggttt taccagcaaa cgggctgtca atctcttccg cgttgataac gatcggcgca
     8521 ggccagtgaa caccttccgc caacagctcg ctgatgacat tgcggttgct ttcttcggca
     8581 aagaagttgt gaacgtggga tgcaacgaca atgccaacat caggcacctt ttgcagctct
     8641 tcaatcgaag cggcttccag cgcttccagc gtgccgaaat atgccgccag acctgctgcg
     8701 gtggcctcgc cgacttcacg gatgccaagt gcatagagga agcgagcaaa ggtggtttct
     8761 ttcgcttttt ccagcgcgtt aaccacgttt tgtgccgatt ttggccccat acgctccagt
     8821 ccggtcagtt tgcctgcggt gagtttgaac agatctgccg gagtgtggac atattctttt
     8881 tcaaccagct gatcgatgat tttgtcgccc attccgtcaa catccatcgc acggcgggaa
     8941 acaaagtgtt tcagcgactc tttacgctgc gcaccgcaaa tcaggccacc ggtacagcgg
     9001 gcaaccgctt caccttccac acgctcaacg tcagaaccac ataccggaca atgcgtcggg
     9061 aatacaacct cacgggtatc ttccgggcgt tcagaaagca cgacgttaac cacctgcggg
     9121 atcacgtcgc cagcgcggcg aatcaccact ttatcgccaa tgcgtaaacc aagacgttcg
     9181 atttcatccg cattgtgtaa ggttgcgtta ctcaccagca cgccagcaac atggacaggt
     9241 tccagacgcg caacaggcgt aatcgcgcca gtacgcccaa cctgaaactc gacgtcacgc
     9301 acaaaggtca tctgctcctg cgccgggaat ttaaacgcta ccgcccagcg cggggcacgc
     9361 gcgacaaagc caagctgctc ctgctgttcc agtgagttga ccttaatcac cacgccgtcg
     9421 atatcaaagc ccagcgtcgg gcggtcttct tccactttgt gatagaacgc cagcacttct
     9481 tccgccgatt cacaaagcgt tacccgatcg ctgaccggca acccccactt tttaaattgc
     9541 agtaaacggc caagatgagt atccggcagc tcgccacctt ccagaacacc aacgccatag
     9601 cagaaaaaag tgagcggtcg cttcgctgta atacgcggat caagctgacg cagtgaacca
     9661 gctgccgcat tacgtgggtt agcaaaaact ttcccgcccg tgcgtcgcgc atcttcgtta
     9721 atcttttcga accccgcctg cggcaggaac acttcaccac gcacttccag acgcgccggg
     9781 atattctctc catgcagctt cagcggaatg gcgcgaatag tacgcacatt agacgtgata
     9841 tcttccccgg tggtgccatc gccacgggtc gcggcactga ctaaaacgcc attttcatac
     9901 agaatactga cggcaaggcc atccagcttc agctcacagc accaggtgac tttctcgttg
     9961 tttttcagac ggtcctgcac acgtttgttg aaagcaagaa agctttcttc atcaaaaacg
    10021 ttatccagtg acagcattgg tacttcatgg cgtatctggc tgaaagccgc cagcggcgca
    10081 gcacctacac gttgggtagg cgaatcaggc gtaatcagtt ctggatgttt agtttccagc
    10141 tcgcgcagtt cgcgcatcag cctgtcgtat tcagcgtcgg gaatttccgg cgcatccatc
    10201 acatgataaa gatattcatg atggcgaagc gtcgttcgca gttctgtcag ttgttgttcg
    10261 attgattcca tatcgcacca tcaatgctaa aaacccccga caagcggggg ttcgaagaag
    10321 agttaatttg ccttaagtgt atcaggcgtt ggcgtctttg acttcgcgga tgatgtcctg
    10381 gtactcgcgc aatttctgcg gagtcatcat acggcgctga tcgtcaagca cgacaccgcc
    10441 cacttcatcg gcaatatgct gcgcagattg cagcatcagc ttgaagttct gcagctcgtc
    10501 accgtaagac ggtacctgca taaagatagt gacacccgga gtagtgaaat ccttcatttc
    10561 aggatcaaag gttcccggtt tcaccatatt cgccaggctg aataacgccg ggccgctgcc
    10621 atccgggcta agatgacgat ggtaaatatt catatcgcca aaaatgaagc ccgcttgttg
    10681 aatgctgtta agaagcagtt caccgtttag ctcgctaccg tgatgcgccg cgacgttcat
    10741 gataatcacc gcttctttgc gcttcggttt atccataact ggagccggtt ccgctacagg
    10801 ctcaggctgt ggtgccgcta cgggttctgc aggctggaaa gcctgttgtg ccggttgcgg
    10861 tgctgaatgc acaggctgcg gcgctggcgc gacctgtggc gaaactggct gctgcaacgg
    10921 ctgttcaggc tgcggctgat agacaggctg ctgcaccggc tgcgctggac gcggagcatg
    10981 ttgcggcggt acctgcgctt caggcggctg ctggaccggt tgacgcggct gcgcagacgc
    11041 ataaggcggt tggtactggt gttgcggcga cggacgagca gcctcatgct cctgagcgtt
    11101 agccggggca tgattcacgc ggtgaacacg aacctcacca acgccctcat catcttcgac
    11161 atcctcgtca taagaatcgt cgtcacgttt tgacttcatt cgttttaatg gccgatcgcg
    11221 gaacatagaa gatcgttctt tacggctggt ccagaaacca tgtaccagta aagcgattat
    11281 ggcgatcgcg ccaacaatga ttaatatcag acgcaaatcc tgcatcatta tattctctgt
    11341 tgttctaaca ccttgccaca acggcaaaca tttactcact aagagtattt gccgattacc
    11401 tcaagtgcaa gtgcactatt aactttcaca gcacaaagat agatgaaatc gtgctttttg
    11461 ctgttttttc gaacatatcc taactgtcca ttgcgcaatt acccggtaaa atacgcagaa
    11521 ttttcctagg attggtcaaa aggagctcat cctgattatg gtttcatcat tcacatctgc
    11581 cccacgcagc ggtttttact attttgcgca aggctggaag ctcgtctcgc aacctgggat
    11641 tcggcgtttc gttattttac cgctgctggt caatattttg ttgatggggg gcgcattctg
    11701 gtggctcttt acacagctcg atgtctggat cccgactctc atgagttacg ttccggactg
    11761 gctacaatgg ctgagttatc tgttgtggcc tctggctgtc atctctgtgc tgttagtgtt
    11821 tggctatttc ttctccacga ttgctaactg gattgccgct ccgtttaacg gtttattggc
    11881 tgaacaactg gaagcacgat tgactggcgc tacaccgcca gataccggga ttttcggtat
    11941 catgaaagat gtgccgcgaa tcatgaaacg cgaatggcaa aaatttgcct ggtatctgcc
    12001 gcgcgcaatt gtattactaa ttctttactt catccctggt attgggcaaa ccgtcgcgcc
    12061 ggtactgtgg ttcctgttta gcgcctggat gttagccatc cagtattgcg attacccctt
    12121 cgataaccac aaagtgccgt ttaaagagat gcgcaccgcc ctgcgcacac gcaaaatcac
    12181 caatatgcag tttggtgctt taaccagcct gtttacgatg atcccgctgc ttaatctgtt
    12241 catcatgccc gttgccgttt gtggcgcgac ggcgatgtgg gtcgattgct atcgcgataa
    12301 acacgcgatg tggcggtaac aatctaccgg ttattttgta aaccgtttgt gtgaaacagg
    12361 ggtggcttat gccgcccctt attccatctt gcatgtcatt atttcccttc tgtatataga
    12421 tatgctaaat ccttacttcc gcatattctc tgagcgggta tgctacctgt tgtatcccaa
    12481 tttcatacag ttaaggacag gccatgagta agatttttga agataactcg ctgactatcg
    12541 gtcacacgcc gctggttcgc ctgaatcgca tcggtaacgg acgcattctg gcgaaggtgg
    12601 aatctcgtaa ccccagcttc agcgttaagt gccgtatcgg tgccaacatg atttgggatg
    12661 ccgaaaagcg cggcgtgctg aaaccaggcg ttgaactggt tgaaccgacc agcggtaata
    12721 ccgggattgc actggcctat gtagctgccg ctcgcggtta caaactcacc ctgaccatgc
    12781 cagaaaccat gagtattgaa cgccgcaagc tgctgaaagc gttaggtgca aacctggtgc
    12841 tgacggaagg tgctaaaggc atgaaaggcg caatccaaaa agcagaagaa attgtcgcca
    12901 gcaatccaga gaaatacctg ctgctgcaac aattcagcaa tccggcaaac cctgaaattc
    12961 acgaaaaaac caccggtccg gagatctggg aagataccga cggtcaggtt gatgtattta
    13021 ttgctggcgt tgggactggc ggtacgctga ctggcgtcag ccgctacatt aaaggcacca
    13081 aaggcaagac cgatcttatc tctgtcgccg ttgagccaac cgattctcca gttatcgccc
    13141 aggcgctggc aggtgaagag attaaacctg gcccgcataa aattcagggt attggcgctg
    13201 gttttatccc ggctaacctc gatctcaagc tggtcgataa agtcattggc atcaccaatg
    13261 aagaagccat ttctaccgcc cgtcgtctaa tggaagaaga aggtattctt gcaggtatct
    13321 cttctggagc agctgttgcc gcggcgttga aactacaaga agatgaaagc tttaccaaca
    13381 agaatattgt ggttattcta ccatcatcgg gtgagcgtta tttaagcacc gcattgtttg
    13441 ccgatctctt cactgagaaa gaattgcaac agtaatgcca gcttgttaaa aatgcgtaaa
    13501 aaagcacctt tttaggtgct tttttgtggc ctgcttcaaa ctttcgcccc tcctggcatt
    13561 gattcagcct gtcggaactg gtatttaacc agactaatta ttttgatgcg cgaaattaat
    13621 cgttacagga aaagccaaag ctgaatcgat tttatgattt ggttcaattc ttcctttagc
    13681 ggcataatgt ttaatgacgt acgaaacgtc agcggtcaac acccgccagc aatggactgt
    13741 attgcgctct tcgtgcgtcg cgtctattaa aaactggcgc taacaataca ggctaaagtc
    13801 gaaccgccag gctagacttt agttccacaa cactaaacct ataagttggg gaaatacaat
    13861 gttccagcaa gaagttacca ttacagctcc gaacggtctg cacacccgcc ctgctgccca
    13921 gtttgtaaaa gaagctaagg gcttcacttc tgaaattact gtgacttcca acggcaaaag
    13981 cgccagcgcg aaaagcctgt ttaaactgca gactctgggc ctgactcaag gtaccgttgt
    14041 gactatctcc gcagaaggcg aagacgagca aaaagcggtt gaacatctgg ttaaactgat
    14101 ggcggaactc gagtaatttc ccgggttctt ttaaaaatca gtcacaagta aggtagggtt
    14161 atgatttcag gcattttagc atccccgggt atcgctttcg gtaaagctct gcttctgaaa
    14221 gaagacgaaa ttgtcattga ccggaaaaaa atttctgccg accaggttga tcaggaagtt
    14281 gaacgttttc tgagcggtcg tgccaaggca tcagcccagc tggaaacgat caaaacgaaa
    14341 gctggtgaaa cgttcggtga agaaaaagaa gccatctttg aagggcatat tatgctgctc
    14401 gaagatgagg agctggagca ggaaatcata gccctgatta aagataaaca catgacagct
    14461 gacgcagctg ctcatgaagt tatcgaaggt caggcttctg ccctggaaga gctggatgat
    14521 gaatacctga aagaacgtgc ggctgacgta cgtgatatcg gtaagcgcct gctgcgcaac
    14581 atcctgggcc tgaagattat cgacctgagc gccattcagg atgaagtcat tctggttgcc
    14641 gctgacctga cgccgtccga aaccgcacag ctgaacctga agaaggtgct gggtttcatc
    14701 accgacgcgg gtggccgtac ttcccacacc tctatcatgg cgcgttctct ggaactgcct
    14761 gctatcgtgg gtaccggtag cgtcacctct caggtgaaaa atgacgacta tctgattctg
    14821 gatgccgtaa ataatcaggt ttacgtcaat ccaaccaacg aagttattga taaaatgcgt
    14881 gctgttcagg agcaagtggc ttctgaaaaa gcagagcttg ctaaactgaa agatctgcca
    14941 gctattacgc tggacggtca ccaggtagaa gtatgcgcta acattggtac ggttcgtgac
    15001 gttgaaggtg cagagcgtaa cggcgctgaa ggcgttggtc tgtatcgtac tgagttccta
    15061 ttcatggacc gcgacgcgct gcccactgaa gaagaacagt ttgctgctta caaagcagtg
    15121 gctgaagcgt gtggctcgca ggcggttatc gttcgtacca tggacatcgg cggcgacaaa
    15181 gagctgccat acatgaactt cccgaaagaa gagaacccgt tcctcggctg gcgcgctatc
    15241 cgtatcgcga tggatcgtaa agagatcctg cgcgatcaac tccgcgctat cctgcgtgcc
    15301 tcggctttcg gtaaattgcg cattatgttc ccgatgatca tctctgttga agaagtgcgt
    15361 gcactgcgca aagagatcga aatctacaaa caggaactgc gcgacgaagg taaagcgttt
    15421 gacgagtcaa ttgaaatcgg cgtaatggtg gaaacaccgg ctgccgcaac aattgcacgt
    15481 catttagcca aagaagttga tttctttagt atcggcacca atgatttaac gcagtacact
    15541 ctggcagttg accgtggtaa tgatatgatt tcacaccttt accagccaat gtcaccgtcc
    15601 gtgctgaact tgatcaagca agttattgat gcttctcatg ctgaaggcaa atggactggc
    15661 atgtgtggtg agcttgctgg cgatgaacgt gctacacttc tgttgctggg gatgggtctg
    15721 gacgaattct ctatgagcgc catttctatc ccgcgcatta agaagattat ccgtaacacg
    15781 aacttcgaag atgcgaaggt gttagcagag caggctcttg ctcaaccgac aacggacgag
    15841 ttaatgacgc tggttaacaa gttcattgaa gaaaaaacaa tctgctaatc cacgagatgc
    15901 ggcccaattt actgcttagg agaagatcat gggtttgttc gataaactga aatctctggt
    15961 ttccgacgac aagaaggata ccggaactat tgagatcatt gctccgctct ctggcgagat
    16021 cgtcaatatc gaagacgtgc cggatgtcgt ttttgcggaa aaaatcgttg gtgatggtat
    16081 tgctatcaaa ccaacgggta acaaaatggt cgcgcctgta gacggtacca ttggtaaaat
    16141 ctttgaaacc aatcacgcgt tctctatcga atctgatagc ggcgttgaac tgttcgtcca
    16201 cttcggtatc gacaccgttg aactgaaagg cgaaggcttc aagcgtattg cagaagaagg
    16261 tcagcgcgtg aaagttggcg atactgtcat tgaatttgat ctgccgctgc tggaagagaa
    16321 agccaagtct accctgactc cggttgttat ctccaacatg gacgaaatca aagaactgat
    16381 caaactgccc ggtagcgtaa ccgtgggtga aaccccggtt atccgcatca agaagtaatt
    16441 cttgccgcag tgaaaaatgg cgcccatcg
//
LOCUS       DAJVUK010000097        16347 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.097, whole genome shotgun sequence.
ACCESSION   DAJVUK010000097 DAJVUK010000000
VERSION     DAJVUK010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16347
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.097"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..190
                     /locus_tag="OQQ57_002757"
     CDS             <1..190
                     /locus_tag="OQQ57_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957457.1"
                     /translation="DMLNPTKDTNWNSTCIYKSRHKMLPVNLTQETLFNSKSQDKHAL
                     FPIFTASWRAYRIMNKGA"
     gene            413..910
                     /gene="ubiC"
                     /locus_tag="OQQ57_002758"
     CDS             413..910
                     /gene="ubiC"
                     /locus_tag="OQQ57_002758"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HCS1957458.1"
                     /translation="MSHPALTQLRALRYFKEIPALDPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            923..1795
                     /gene="ubiA"
                     /locus_tag="OQQ57_002759"
     CDS             923..1795
                     /gene="ubiA"
                     /locus_tag="OQQ57_002759"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HCS1957459.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="OQQ57_002760"
     CDS             complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="OQQ57_002760"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HCS1957460.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPSHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4544..4912
                     /gene="dgkA"
                     /locus_tag="OQQ57_002761"
     CDS             4544..4912
                     /gene="dgkA"
                     /locus_tag="OQQ57_002761"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HCS1957461.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            5022..5630
                     /gene="lexA"
                     /locus_tag="OQQ57_002762"
     CDS             5022..5630
                     /gene="lexA"
                     /locus_tag="OQQ57_002762"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HCS1957462.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5703..7028
                     /gene="dinF"
                     /locus_tag="OQQ57_002763"
     CDS             5703..7028
                     /gene="dinF"
                     /locus_tag="OQQ57_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HCS1957463.1"
                     /translation="MAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVY
                     LGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGAL
                     IALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARA
                     PVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGI
                     SGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTL
                     LTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGE
                     HIIALLTSLTQIQQLADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAA
                     GFALTLLTLPWLGNHALWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT"
     gene            7144..7353
                     /locus_tag="OQQ57_002764"
     CDS             7144..7353
                     /locus_tag="OQQ57_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HCS1957464.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7395..7910)
                     /gene="zur"
                     /locus_tag="OQQ57_002765"
     CDS             complement(7395..7910)
                     /gene="zur"
                     /locus_tag="OQQ57_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HCS1957465.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQSTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
     gene            8228..9213
                     /locus_tag="OQQ57_002766"
                     /pseudo
     CDS             8228..9213
                     /locus_tag="OQQ57_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001560258.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 domain-containing protein"
     gene            9576..10613
                     /gene="dusA"
                     /locus_tag="OQQ57_002767"
     CDS             9576..10613
                     /gene="dusA"
                     /locus_tag="OQQ57_002767"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HCS1957466.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECGMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDAYPV
                     AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADKR"
     gene            10747..10989
                     /gene="pspG"
                     /locus_tag="OQQ57_002768"
     CDS             10747..10989
                     /gene="pspG"
                     /locus_tag="OQQ57_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HCS1957467.1"
                     /translation="MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(11154..12137)
                     /locus_tag="OQQ57_002769"
     CDS             complement(11154..12137)
                     /locus_tag="OQQ57_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HCS1957468.1"
                     /translation="MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGSGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            12220..13635
                     /gene="dnaB"
                     /locus_tag="OQQ57_002770"
     CDS             12220..13635
                     /gene="dnaB"
                     /locus_tag="OQQ57_002770"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HCS1957469.1"
                     /translation="MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            13688..14767
                     /gene="alr"
                     /locus_tag="OQQ57_002771"
     CDS             13688..14767
                     /gene="alr"
                     /locus_tag="OQQ57_002771"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HCS1957470.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYVD"
     gene            15020..16213
                     /gene="tyrB"
                     /locus_tag="OQQ57_002772"
     CDS             15020..16213
                     /gene="tyrB"
                     /locus_tag="OQQ57_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709866.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HCS1957471.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLKAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNSVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGF
                     SAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQL
                     KATVRRNYSSPPNLGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
BASE COUNT         3906 a         3898 c         4331 g         4212 t
ORIGIN      
        1 tgatatgttg aatcctacaa aagataccaa ttggaattct acgtgtatct ataaatccag
       61 acataagatg ttgcctgtta atcttactca ggaaacactt ttcaactcca aatctcagga
      121 taaacatgcg cttttcccca tttttactgc gagttggcga gcttatcgta taatgaataa
      181 gggtgcttaa gtaaaggaaa acatcaccgt tcctggcatc ctgggcggtg atgcccctat
      241 ggttgccctc gccagcgcgg gcatcggcaa agcgtaaggt tcaaaagcga tttaccactt
      301 catgcgattg ttgcgttttt gttgcgcatt agatcactta atttgcttta catctcccgt
      361 aaacactttt ctgcgataca atgcctttac gttatgtaac ggagagttcg gcatgtcaca
      421 ccccgcgtta acgcaactgc gtgcgctgcg ctattttaaa gagatccctg ccctggatcc
      481 gcaactgctc gactggctgt tgctggagga ttccatgaca aaacgttttg aacagcaggg
      541 aaaaacggta agcgtgacga tgatccgcga agggtttgtc gagcagaatg aaatccccga
      601 agaactgccg ctgctgccga aagagtctcg ttactggtta cgtgaaattt tgttatgtgc
      661 cgatggtgaa ccgtggcttg ccggtcgtac cgtcgttcct gtgtcaacgt taagcgggcc
      721 ggagctggcg ttacaaaaat tgggtaaaac gccgttagga cgctatctgt tcacatcatc
      781 gacattaacc cgggacttta ttgagatagg ccgtgatgcc gggctgtggg ggcgacgttc
      841 ccgcctgcga ttaagcggta aaccgctgtt gttaacagaa ctgtttttac cggcgtcacc
      901 gttgtactaa gaggaaaaaa atatggagtg gagtctgacg cagaataagc tgctggcgtt
      961 tcatcgctta atgcgtacgg ataagccaat tggcgcgtta ctgctgctct ggccaacatt
     1021 atgggcgttg tgggtggcga caccgggcgt tcctcagctc tggatcctgg cggtatttgt
     1081 cgcgggtgtc tggctgatgc gcgctgccgg atgtgtggtg aatgattatg ctgaccgaaa
     1141 gtttgatggt catgttaagc gcacggcgaa ccgaccactt cccagcggcg cggtaacaga
     1201 gaaagaggcg cgcgcgctgt ttgtagtgct ggtactgatt tcgtttttac tggtactgac
     1261 gctgaatacg atgaccattc tgttgtcgat tgccgctctg gcgttggcgt gggtgtaccc
     1321 gtttatgaag cggtataccc atctcccgca agtggtgctg ggcgcggcgt ttggctggtc
     1381 gattccaatg gcttttgccg ctgtgagtga gtcggtgcca ttgagttgct ggttaatgtt
     1441 cctcgccaat attctctggg cggtggctta cgacacgcag tatgcgatgg ttgaccgcga
     1501 tgatgatgtg aagattggca ttaaatccac ggcaatcctg ttcggccaat acgataaatt
     1561 gattattggt attttgcaga ttggcgtact ggcactgatg gcgatcatcg gtgagttaaa
     1621 tggcttaggc tggggatatt actggtcaat tctggtggct ggcgcgctgt ttgtttatca
     1681 acaaaaactg attgccaacc gcgagcgtga agcctgcttt aaagcattta tgaataataa
     1741 ctatgttggt ctggtactat ttttagggct ggcaatgagt tactggcatt tctgatgatg
     1801 taaaaaagcc ggatgatcat ccggctttct tctgggttgc ctgatgcgcg gcgcttctca
     1861 ggcctacaca acacatcgca atttattgaa tttgcagatt atggaatgcc ggataaggcg
     1921 ttttcgccgc atccggcaat tctctctggt tacccttcgc cctgcgtcgc actctcaatc
     1981 gtcaaacgca cgtctgatgt aatcaactcc gccagcaact gataaacctt catcgtttct
     2041 gccggttcgg catcgccgct atcgctgata tacccttcat cacgcagcgt cagcaccaga
     2101 gaactgaaca ccgccttgtc gaagaactcc ggcgcgttga taccgtgcag cacggagaga
     2161 cgttgcgcga cggtgcggct ctctttctcc agcgtaccgc ggttgatcga cgggttagcg
     2221 ctcaacagcc agaaggtgat ggcataacgt tgcagcgttt cgcgcgcgcc tgcggccagc
     2281 agctgtagcg tgcgagaatg cgacgggttg atatgcaact catcatcttg cagggtaatc
     2341 agcccctgac gttgcatctc atttgccaac gcatcaataa cgtccggcaa ctcgtcgcga
     2401 tcccagcgca ggaacagctc cgctttcagc attgggtaaa gcacattgac gtgctccatc
     2461 aatacgtcgc gggagatgtg gcgatgctgg gtgacaattg ccgccatcag cgaaggcagc
     2521 accaacatat gcgcaatgtt gttgcgatag taggtcatca gcaccgcttg ctcgcgcggc
     2581 agaatgatga tgtcgccgat agtgtctttc tcaacttcaa acttgttcat ttgcagcgcg
     2641 tgatcgataa gctcgctggc gctggctgaa ggaacggtag agtccgtgga gtaaggtacg
     2701 ttgcgcatca gatccaggta gcagttgagt tgctcggtta actgctcgcg ggtaagtgag
     2761 cgctgacgtg atgccagtag cgcggtacag cagaggttca tggcgtttgc cgcgcctgcg
     2821 ttgttaatgc gtaccatcag atcggcagca atattattga ccgtcggcgt taaccatgcc
     2881 ggacgcaccg cttcgatggg atcgatagat tcacgccagt caggtacatg ctggttaagg
     2941 taggtcatca acggcattgg ttcaccgaag ttgacgtaac cctgaccgag attacgcagc
     3001 ttgcttaaac cgcgcagcat ctgcggcagg ctctctttct ctttcgtcgc accgcgcagt
     3061 tctttggcgt aagtacccac ttccatgacg tgctcataac cgatatagat cggaatcagc
     3121 gtaatcggac gcgtgccgcc acgcagcatc gcctgaatgg tcatcgacag cgtaccggtt
     3181 ttcggatcca gcaaacgccc cgtacgggaa cgaccgcctt ccacgaaata ctcgacggaa
     3241 taaccacggc tgaacagttc gccgagatac tcacggaaaa cggtggaata aagtttattg
     3301 cctttaaacg tacggcgaat aaagaacgcc cccagacggc ggaaaatcgg cccggccggc
     3361 cagaaattca ggttgatccc ggcggcgata tgcggcggca ccagcccctg gtggtacagc
     3421 acgtaagaaa gtagcaggta gtccatgtga ctgcggtggc aaggcacata caccagctca
     3481 tgaccgtcgt gggccagctg gcgaacgcgc tcggcgttat ggacgttgat gccctgataa
     3541 agtcggttcc aggtgaagcc cagaatgcgg tcagtcaggc ggatcatctc gtaagagaaa
     3601 ttcgccgcaa tctcttccat cagcgcaatc gcgttctgct gcgctttttc atgggagatt
     3661 tttttgctgc gcgcttcatc ttctaccgct ttggcaatgg cgcgggaggc gagcagctta
     3721 ttaaacagat cctgacgagc aggcagacgt gggcccacag cagccagacg ttgacgggca
     3781 aagtgcatac gcgccacgcg cgccagtttc tgtgcgatag ttttatccgt gccgtgttca
     3841 tccgccatac ggcgcagcga aactgacggc gagaaacgca caaaactgtc gcgaccgagc
     3901 cacagtacag cgaaaaattt ctgtacgccg ttaagcatac gcagcggcgg gtttacttcg
     3961 cctttttcac gccccggcgc gcgaccaaac atcaccgata ctggcaccat ctgcacatcc
     4021 agatttgggt tgctacggtg caaatcgaga tagtcgtgga acagcttaat agactcttct
     4081 ttcggcgtgt aataggtgaa tacacgcggc ccgccgtgaa tgaacacata gcgcggcagt
     4141 agcgtgccgt cgatttccag cggctctaac gggtcaggca agtcatgagc cagacactgg
     4201 gcgcgtaacg tcagcaaatc tgctttcgag ttgtacggta aaacgtacat aattggacga
     4261 gaggtatcca gccccagttc cggggcagga tctgccggaa tagacttgct ttttaccagg
     4321 atgcttaatg gtaaattcag taatttgtag taaattcgtg gccagccgga cataaacgat
     4381 gtaaagcctc tggttaataa tgcaaatgcg cggcaaggat agcagaaagt catgggaaat
     4441 tctgtggtat ccgctcatgt ttcgcgcggc gttacgcaaa cccgaatcat cggatttaac
     4501 ggtacactga tattgacgct cataatgtaa aaaggttctt tcaatggcca ataataccac
     4561 tggattcacc cgaattatca aagctgctgg ctattcctgg aaaggtttac gcgctgcatg
     4621 gatcaacgaa gcggcattcc gtcaggaagg cgtagcggta ttgttggcgg tggtcatcgc
     4681 ctgctggctg gatgtggacg caattacccg cgtgctgctt atcagctccg tgatgctggt
     4741 gatgattgtg gaaatcctca atagcgccat cgaagcagtg gttgaccgaa ttggctctga
     4801 ataccatgag ctttccggac gcgcaaaaga tatgggatcc gccgcggtgc tgattgcgat
     4861 tatcgtcgcc gtgataacct ggtgcatcct gttatggtcg cattttggat aacccttcca
     4921 gaattcgata aatctctggt ttattgtgca gtttatggtt ccaaaatcgc cttttgctgt
     4981 atatactcac agtataactg tatatacacc cagggggcgg aatgaaagcg ttaacggcca
     5041 ggcaacaaga ggtgtttgat ctcatccgtg atcacatcag ccagacaggt atgccgccga
     5101 cgcgtgcgga aatcgcgcag cgtttggggt tccgttcccc aaacgcggct gaagaacatc
     5161 tgaaggcgct ggcacgcaaa ggagttattg aaattgtttc cggcgcatca cgcgggattc
     5221 gtctgttgca ggaagaggaa gaagggttgc cgctggtagg tcgtgtggct gccggtgaac
     5281 cgcttctggc gcagcagcat attgaaggtc attatcaggt cgatccttcc ttattcaagc
     5341 cgaatgctga tttcctgctg cgcgtcagcg ggatgtcgat gaaagatatt ggcattatgg
     5401 atggcgactt gctggcagtg cataaaactc aggatgtacg taacggtcag gtcgttgtcg
     5461 cacgtattga tgacgaagtt accgttaagc gcctgaaaaa acagggcaat aaagtcgaac
     5521 tgttgccaga aaatagcgag tttaaaccaa ttgtcgttga ccttcgtcag cagagcttca
     5581 ccattgaagg gctggcggtt ggagttattc gcaacggcga ctggctgtaa catatctctg
     5641 agaccgcgat gccgccaggc gtcgcggttt gtttttcatc tctcttcatc aggcttgtct
     5701 gcatggcatt cctcacttca tctgataaag cactctggca tctcgcctta cccatgattt
     5761 tctccaatat caccgttccg ttgctgggac tggtcgatac ggcggtaatt ggtcatcttg
     5821 atagtccagt ttatttgggc ggcgtggcgg ttggtgcaac ggcgaccagc tttctcttta
     5881 tgctgttgct gtttttacgc atgagcacca ccgggctgac tgcgcaggct tatggtgcca
     5941 aaaatcctca ggcattagcc cgtgcgctgg tgcaaccgtt gctgttggcg ttgggggcag
     6001 gggcgttaat tgcgctgctg cgtacaccga ttatcgatct ggcactgcat attgttggcg
     6061 gtagtgaagc agtcctggaa caggcgcggc gctttcttga aatccgctgg ttaagcgcac
     6121 cggcgtcact ggcgaatctg gtattacttg gttggttact cggcgtgcaa tatgcccgtg
     6181 cgccagtaat tttgttagtg gtcggcaata tcctcaacat tgtgctggat gtctggctgg
     6241 tgatggggct gcatatgaac gtgcagggcg cggcgctggc gacggttatt gcggaatatg
     6301 caacattgct gattggtctg ctaatggtgc gtaaaatcct caaactacgc ggaatttccg
     6361 gcgaaatgct gaaaactgcc tggcgaggaa acttccgtcg cttgctggcg cttaaccgcg
     6421 atatcatgct gcgttcgctg ttgttgcaac tctgtttcgg cgcgatcacc gtacttggtg
     6481 cgcgactggg gagtgacatt atcgctgtta acgcggttct gatgacgcta ctcaccttta
     6541 ccgcctatgc gctggatggt tttgcctacg cggttgaagc gcattccggt caggcgtacg
     6601 gtgcgcgcga cggtagccag ttgctggatg tctggcgggc agcgtgccgc cagtcgggga
     6661 tcgtagcgtt actgttttcg gtagtttatt tgctggcagg ggaacacatc attgcgttgc
     6721 tgacgtcgtt aacccagatt cagcagctgg ccgaccgcta tcttatctgg caggtgattt
     6781 tgccgttggt tggcgtctgg tgttatctgc tggacggcat gtttataggc gcaacgcgcg
     6841 cagccgaaat gcgtaacagt atggcggtgg ccgccgcagg ttttgcgctg acgctcctta
     6901 cgctgccgtg gctgggtaat catgctttgt ggctggcgtt aaccgtcttt ctggcgttgc
     6961 gcgggctttc tctggcggct atctggcggc gtcactggcg caacggtacc tggtttgccg
     7021 caacgtgacg gttaaaaatt ctgaataaat aatcctaagc caaattgctg actacactta
     7081 atctcacgtt cagaagaaaa gtgaacgtac tctcattcac aacctaacga tgaggtcttg
     7141 attatgaata aagatgaagc cggcggtaac tggaaacagt ttaaaggtaa agtgaaagag
     7201 caatggggca aactgaccga tgatgatatg acgatcattg aaggtaaacg tgatcaactg
     7261 gtcggtaaaa tccaggaacg ttatggttat cagaaagatc aggcagaaaa agaggtcgtg
     7321 gattgggaaa cccgcaatga atatcgctgg taattaatcc ctcctgcccg acgtgtacaa
     7381 ggatgtacgc cctcttaacg cggtttcttt ttcacctgca cagagtgatc atgctggcac
     7441 tgttcaggat gacgacacgc ttccacttcc acgcatgccg cacagagccc atgtgcttca
     7501 atcacattat gccgcagggc aaaccccatt tttgccgcca gcgtatgcat gatgtcttcc
     7561 acgccttctg cacactcttc tttcactgcg ccgcagcgat cgcaaataaa catggctgaa
     7621 gtatgggtgg actggtcgaa cagatgacag agcacataac tgttggtgga ttccacctta
     7681 tgcacaaaac cttgctcaag cagaaaatcc agcgcgcgat aaaccgttgg cggcttggct
     7741 tgcggttcag cttcgcgcag taaatcaagc agatcataag cgctgatagc gccatcctgc
     7801 agactcatca ggcgcaacac ttccaggcgc tgtggggtca ggcgcacatt acgctgcgcg
     7861 cagatttttt cagcctgcgc taataactcc tgcgttgtgg tcttttccat cgggcacctc
     7921 aaagtggggg ttaagaatgt ccttacttta ccatgttcca ggaaaaacac cgagaaccct
     7981 tattgttgcc gtaatgttga ttttctgttt tgtaggtaag gtgttatgtt gccttgtcgt
     8041 accattatca acacgataat aattaataat tcatttttaa ataaattgct tcaagttaac
     8101 tcgctattta tttaactggg tttaaacgca tacctgtagt tcagaaatta tgagcgattt
     8161 ttgatagtga ccagatggca aaagaattat aaggaggaca cggtacgaca aaaaaggtag
     8221 atgaatcatg ttgaagataa tacccggtgc aactggatac tttaataaaa cactcaattc
     8281 aaatcaattc gataatgaag atgcaatcaa agataaatta gataatagag gttcaatcaa
     8341 aggtaaatta aataatatat atggtaaatc tattgattat gcagcgctgc gtcatcggga
     8401 tataattatt gcaaaaatag atttgtttat tcaacgaatc acgcataatt tatggcatgc
     8461 acgtaaaaaa atgtgttttt aattgagcaa ataaatgatc tcaaaatgtg ggtcaataag
     8521 tatattgacg attgcactga tgaggattta aacgatcgtg actttattgc atcagttgtt
     8581 gaccgggcta tttttcattt cgcgattaat agtatatgta atcctgggga taataaagat
     8641 gcgactccca ttgaacaatg tacttttgat gtagaaacta agaatggcct tccctccacg
     8701 gttcagctat tttatgagga atctaaggat aatgaacctt tagcgaatat acattttcaa
     8761 acaataggtt ctggtttttt aacgtttgtt aatgcctgcc aggaacatga tgacaacagc
     8821 ttaaaattat ttgcttcgct gttaatttca ctttcatatt ctagtgccta cgcagattta
     8881 tcagaaacag tgtatattaa tgaaaataat gagagctacc tgaaagctca gtttgaaaaa
     8941 ttatctcaac gtgatatgaa gaagtacctg ggagagatga agcgtctggc tgatggggga
     9001 gaaatgaatt ttgatggcta tctggataag atgtcacatc tggtgaatga agggacgctc
     9061 gatcctgata ttttaagcaa aatgcgagat gctgcaccac aattaattag cttcgcgaag
     9121 tcgtttgacc caacctcaaa ggaagagatt aaaatactta cagacacttc taaattaatt
     9181 tatgatttgt tcggggttaa atcggagaaa taatatgtga agttcttcga tagtatggaa
     9241 ggcattatat aaaaggaccc aatatttatt gggtcctttt ttctctatca atgctattag
     9301 cagggagata tatcaccaaa gtttaatgtg tgatttttta tttatcgtcg aacctggatt
     9361 gtttatcatt ggccttaaca aagttaacgg ctaataagat tatttccatc acttcgtgag
     9421 agcttcatgc cttgagagga tctcaatttt cttttgcaat gagacaggcg cttcctgttg
     9481 ttatggtata gtaccccgct attgagcctc ctgaatagtg atgctgaata acataacccc
     9541 atgatatatc gataaaataa tctctacatt tgaaaatgca cggtaattct gaaatgcaaa
     9601 aaatcaacca aaccagcgca atgcctgaaa aaactgacgt tcactggagt ggtcggttta
     9661 gcgttgcacc aatgctcgac tggacggaca gacattgccg ctatttcttg cgtctgcttt
     9721 cccgcaatac gttgctgtat accgaaatgg tgaccacagg ggcgattatt cacggtaaag
     9781 gtgattacct ggcgtacagt gaagaagaac atccggtagc gttgcaactc ggcggtagcg
     9841 atccggcggc gctggcacag tgtgcgaagc tggcagaagc gcgtggatat gatgagatca
     9901 acctgaatgt cggctgcccg tctgaccggg tgcagaacgg catgtttggt gcgtgtctga
     9961 tgggtaatgc gcagctggtt gccgattgcg tgaaagcgat gcgcgatgtg gtgtcgattc
    10021 cggtgacggt gaaaacgcgt attggcatcg atgaccagga cagctatgaa tttctctgcg
    10081 atttcatcaa caccgtttcc ggcaaaggcg agtgtgggat gttcatcatc catgcacgta
    10141 aagcctggct ttcggggtta agcccgaaag aaaaccgtga aatcccgccg ctcgattatc
    10201 cgcgtgtgta tcaactgaag cgtgactttc cgcatctgac aatgtcgatt aacggtggta
    10261 tcaagtcgct ggaagaggcc aaagcacacc tgcaacatat ggatggcgtg atggtcgggc
    10321 gcgaggcgta tcagaatccg ggtattctgg cggcggtaga ccgggagatc tttggttcct
    10381 cggataccga tgcctatccg gtggcggtag tgcgcgccat gtatccgtac attgagcgtg
    10441 aactcagcca ggggacgtat ctcggccata ttacccggca tatgttgggc ttgttccagg
    10501 gtattcctgg cgcgcggcag tggcggcgtt atttaagtga aaatgcccat aaagcgggtg
    10561 cagacattaa tgtgctggaa cacgcgctca aactggtggc ggataagcgt taacttttca
    10621 ccaaaaagta gtcaaattca ccacgccctg cgcaccgtcg cggggcgttt tgctgttaaa
    10681 tcaatagatt atttttggca tgattcttgt aatgccagca agagatttca tatttgggag
    10741 agcatcatgc tggaactact ttttgtgatt ggcttttttg tcatgctgat ggtcaccggc
    10801 gtttcgttgc tgggcattat cgccgcgctg gttgtggcga cggccattat gttcctcggc
    10861 ggtatgctgg cattgatgat taagttgctg ccgtggttac tactggcgat tgcggtggtg
    10921 tgggttatta aggcgattaa agcaccaaaa gtgcctaaat atcagcgtta tgaccgctgg
    10981 cgttactaag ggattgtgcg gatgatcaca acctaaggtt ttatccttag aacaaaatag
    11041 gaattgataa tcaaatctgt cactattgcg cctctaacag attcatcgtg ctgtacccta
    11101 catacagccg actataaaaa gaaagggctt cccaggtgga agccctattt cttttatgga
    11161 atcagcaggc tggaaccttg cgtcgcccgg ctttccagaa tctcatgcgc acgctgcgca
    11221 tccttcagcg gatatttctg ctgctcggcg acatcgacct taatcacacc gctggcaatc
    11281 aaagagaaca gttcattact ggcctcggtt aattcctccc gtgtggtgat atagccttgc
    11341 agggaagggc gtgtcacata caacgagcct ttttgattga gaatgcctaa gttcacaccg
    11401 gtaaccgcac ctgatgagtt gccaaaactg accattaagc cgcggcgttg caggcaatcc
    11461 agcgaccgtt cccaggtgtc tctgcccacg gaatcgtaca ctacgcgcac tttcttaccg
    11521 ccggtgatct ctttcaatcg ctcgaccaga ttctcttcac gatagttaat aacctgccac
    11581 gcgccggctt ttagcgcgct ctgcgctttt tgcgcggttc ctacggtgcc gataagtttc
    11641 gcgcccagag cttttgccca ctggcaggca atcaagccaa cgccgccagc cgctgcgtgg
    11701 aacaggaact gttcatcggg tttaatttca taggttttgc gcagcagata ataaaccgtt
    11761 aagcctttca ggaaagatgc tgcagcttgc tcaaaagaaa tagccgcagg cagaatcgcc
    11821 gctttatccg cattaatgtt atgcacagag ctgtaagcgc ctaacgccga ctgcgcatag
    11881 actacacgat cgcctgcctt aatatgcttt acaccactgc cgactttact cacgatgcct
    11941 gccgcttcgg tacctgatcc gctgggtagt gatggcggcg ggtaaaggcc gctgcggata
    12001 tacgtgtcga taaaattgat gccgatggct ttattttcga cctggatttc attctctgcc
    12061 ggatcggcag gagtgaactc tacggcttga agtacttccg ggccaccgtg cttgtgaaat
    12121 tcaattcgtg ttgccatgtg tcctccagaa cgtatcgtca gggtctgctt catatggtaa
    12181 agtttcgacc cattctttat ctcggtaact ccattcacta tggcaggaaa taaacccttc
    12241 aacaaacagc aggctgaacc ccgcgaacgc gatccacaag ttgccgggct gaaagtgcct
    12301 ccgcactcga tcgaagcgga gcagtcggtg ttgggcggtt taatgctgga taacgaacgc
    12361 tgggacgatg tagccgagcg tgtggtggca gacgattttt acacccgccc acaccgccat
    12421 atctttactg aaatggcgcg tttgcaggaa agcggtagtc ctatcgatct gattaccctt
    12481 gcggaatcgc tggaacgcca ggggcaactc gatagcgtcg gtggttttgc ttatctggca
    12541 gagctgtcaa aaaatacgcc aagtgcggcg aacatcagtg cttatgctga catcgtgcgt
    12601 gaacgtgccg ttgtccgtga gatgatctcg gttgcgaatg agattgctga agccggtttt
    12661 gatccgcagg ggcgtaccag cgaagatctg ctggaccttg ctgaatcccg cgtctttaaa
    12721 attgccgaaa gtcgtgcaaa caaagacgaa gggccgaaga acatcgccga tgtgctcgac
    12781 gcaaccgtgg cgcgtattga gcagttgttt cagcagccac acgatggcgt taccggagta
    12841 aacaccggtt atgacgatct caacaaaaaa accgctggct tgcagccgtc ggatttgatc
    12901 atcgtcgccg cgcgtccgtc gatgggtaaa acaacatttg cgatgaacct cgtcgaaaac
    12961 gcggcgatgt tgcaggataa accagtactt atcttctcgc tggagatgcc ttcagaacag
    13021 attatgatgc gttctctggc gtcgctgtcg cgcgttgacc agactaaaat ccgtaccggg
    13081 cagctcgatg atgaagactg ggcgcgcatt tccggcacca tgggtatttt gctcgaaaaa
    13141 cgcaatatct atatcgatga ctcctccggc ctgacgccaa cggaagtgcg ttcccgcgca
    13201 cgccgtattg cccgtgaaca cggcggcatc gggcttatca tgatcgacta cctgcaactg
    13261 atgcgcgtac cggcgctttc cgataaccgt acgctggaaa ttgcagaaat ctctcgctcg
    13321 ctgaaagcac tggcgaaaga actgaacgtg ccggtggtgg cgctgtccca gttgaaccgt
    13381 tctctggaac aacgtgccga caaacgcccg gtcaactccg acctgcgtga atctggctct
    13441 atcgagcagg atgcggactt gatcatgttt atctatcgtg atgaggtgta tcacgaaaac
    13501 agtgatttaa aaggcatcgc ggaaattatt atcggtaaac aacgtaacgg cccaatcggg
    13561 acggtacgcc tgacctttaa cggtcaatgg tcgcgcttcg acaactatgc ggggccgcag
    13621 tacgacgacg aataataatt attttatgaa ttaggcaatt aaagcaaaca cttatcaagg
    13681 aacacaaatg caagcggcaa ctgttgtgat taaccgccgc gctctgcgac acaacctgca
    13741 acgtcttcgt gaactggccc ctgccagtaa aatggttgcg gtggtgaaag cgaacgctta
    13801 tggtcacggt cttcttgaga ccgcgcgaac gctccccgat gctgacgcct ttggcgtagc
    13861 ccgtctcgaa gaagctctgc gactgcgtgc ggggggaatc accaaacctg tactgttact
    13921 cgaaggcttt tttgatgcca gagatctgcc gacgatttct gcgcaacatt ttcataccgc
    13981 cgtgcataac gaagaacagc tggctgcgct ggaagaggct agcctggacg agccggttac
    14041 cgtctggatg aaactcgata ccggtatgca ccgtctgggc gtaaggccgg aacaggctgg
    14101 ggcgttttat catcgcctga cacagtgcaa aaacgttcgt cagccggtga atatcgtcag
    14161 ccattttgcg cgcgcggatg aaccaaaatg tggcgcaacc gagaaacaac tcgctatctt
    14221 taataccttt tgcgaaggca aacctggtca acgttccatt gccgcgtcgg gtggcattct
    14281 gctgtggcca caatcgcatt ttgactgggt gcgcccgggc atcattcttt atggcgtctc
    14341 gccgctggaa gatcgctcca ccggtgccga ttttggctgt cagccagtga tgtcactaac
    14401 ctccagcctg attgccgtgc gtgagcataa agccggagag cctgttggtt atggtggaac
    14461 ctgggtaagc gaacgtgata cccgtcttgg cgtagtcgcg atgggctatg gcgatggtta
    14521 tccgcgcgcc gctccatccg gtacgccagt gctggtgaac ggtcgcgaag taccgattgt
    14581 cgggcgcgtg gcgatggata tgatctgcgt agacttaggt ccacaggcgc aggacaaagc
    14641 cggggatccg gtcattttat ggggcgaagg tttgcccgta gaacgtatcg ctgaaatgac
    14701 aaaagtgagc gcttacgaac ttattacgcg cctgacttca agggtcgcga tgaaatacgt
    14761 ggattaatcg ttctgtaata tttgattgtc tgtgccggat gcggcgtgaa tgccttatcc
    14821 ggccaataaa atcctaaaaa ttcaataagt tgatgttctt tcatgctctt ataaaggtcg
    14881 tgcctctggc ggatgttcgt ttgtcatgag tctcactctg ttgctaattg ccgttcgctc
    14941 ctgaacatcc actcgatctt cgccttcttc cggtttattg tgttttaacc acctgcccgt
    15001 aaacctggag aaccatcgcg tgtttcaaaa agttgacgcc tacgctggcg acccgattct
    15061 tacgcttatg gagcgtttta aagaagaccc tcgcagcgac aaagtgaatt taagtatcgg
    15121 tctgtactac aacgaagacg gaattattcc acaactgaaa gccgtggcgg aggcggaagc
    15181 gcgcctgaat gcgcagcccc atggcgcttc gctttattta ccgatggaag ggcttaacag
    15241 ctatcgccat gccattgcgc cgctgctgtt tggtgcggac catccggtac tgcaacaaca
    15301 gcgcgtagca accattcaaa cccttggcgg ctcaggggca ttgaaagtgg gcgcggattt
    15361 cctgaaacgc tacttcccgg aatcaggcgt ctgggtcagc gatcctacct gggaaaacca
    15421 cgtagcaata ttcgccgggg ctggattcga agtgagtact tacccctggt atgacgaagc
    15481 gactaacagc gtgcgcttta atgacctgtt ggcgacgctg aaaacattac ctgcccgcag
    15541 tattgtgttg ctgcatccat gttgccacaa cccaacaggt gccgatctca ctaatgatca
    15601 gtgggatgcg gtgattgaaa ttctcaaagc ccgcgagctt atcccattcc tcgatattgc
    15661 ctatcaagga tttagtgccg gtatggaaga ggatgcctac gctattcgcg ccattgccag
    15721 cgctggatta cccgctctgg tgagcaattc gttctcgaaa attttctccc tttacggcga
    15781 gcgcgtcggc ggactttctg ttctgtgtga agatgccgaa gccgctggcc gcgtactggg
    15841 gcaattgaaa gcaacagttc gccgcaacta ctccagcccg ccgaatttgg gtgcgcaggt
    15901 ggtggctgca gtgctgaatg acgaggcatt gaaagccagc tggctggcgg aagtagaaga
    15961 gatgcgtact cgcattctgg caatgcgtca ggaattggtg aaggtattaa gcacagagat
    16021 gccagaacgc aatttcgatt atctgcttaa tcagcgcggc atgttcagtt ataccggttt
    16081 aagtgccgct caggttgacc gactacgtga agaatttggt gtctatctca tcgccagcgg
    16141 tcgcatgtgt gtcgccgggt taaatacggc aaatgtacaa cgtgtggcaa aggcgtttgc
    16201 tgcggtgatg taatgcagga aagcaggctg gagttaccca gcctgcagtg aaattaaact
    16261 gtcgtcgctt tcactatttc tttgtagatg atttttttga tgccgttgtt ctacgtgaga
    16321 gataataaaa cgttgtcagt tctttta
//
LOCUS       DAJVUK010000098        15957 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.098, whole genome shotgun sequence.
ACCESSION   DAJVUK010000098 DAJVUK010000000
VERSION     DAJVUK010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15957
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.098"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            4..1239
                     /locus_tag="OQQ57_002773"
     CDS             4..1239
                     /locus_tag="OQQ57_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCS1957472.1"
                     /translation="MSKLPTGVEIRGKYIRIWFMFRGKRCRETLKGWEITNSNIKKAG
                     NLRALIVHEISSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNT
                     MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT
                     VDSYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS
                     QNLWKFAVYSGLRHGELAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL
                     LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVS
                     SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG
                     MWIDDMNDEQIAMLNARLS"
     gene            1291..2226
                     /gene="ttcA"
                     /locus_tag="OQQ57_002774"
     CDS             1291..2226
                     /gene="ttcA"
                     /locus_tag="OQQ57_002774"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HCS1957473.1"
                     /translation="MQENQQITKKEQYSLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPVYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
     gene            complement(2355..3728)
                     /gene="dbpA"
                     /locus_tag="OQQ57_002775"
     CDS             complement(2355..3728)
                     /gene="dbpA"
                     /locus_tag="OQQ57_002775"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HCS1957474.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAVISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
                     CRVRLLK"
     gene            complement(4174..5157)
                     /gene="zntB"
                     /locus_tag="OQQ57_002776"
     CDS             complement(4174..5157)
                     /gene="zntB"
                     /locus_tag="OQQ57_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HCS1957475.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            5412..6644
                     /gene="dgcM"
                     /locus_tag="OQQ57_002777"
     CDS             5412..6644
                     /gene="dgcM"
                     /locus_tag="OQQ57_002777"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HCS1957476.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISSLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(6665..7228)
                     /gene="smrA"
                     /locus_tag="OQQ57_002778"
     CDS             complement(6665..7228)
                     /gene="smrA"
                     /locus_tag="OQQ57_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HCS1957477.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV
                     FSFIHQALADGLRNVLIIHGKGREDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
     gene            complement(7558..8466)
                     /locus_tag="OQQ57_002779"
     CDS             complement(7558..8466)
                     /locus_tag="OQQ57_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1957478.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE
                     FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT
                     PQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ
                     RRDSRQTPLTPSLITQFRRECGYLQS"
     gene            8642..9942
                     /gene="abgA"
                     /locus_tag="OQQ57_002780"
                     /pseudo
     CDS             8642..9942
                     /gene="abgA"
                     /locus_tag="OQQ57_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415854.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate hydrolase subunit AbgA"
     gene            9942..11387
                     /gene="abgB"
                     /locus_tag="OQQ57_002781"
     CDS             9942..11387
                     /gene="abgB"
                     /locus_tag="OQQ57_002781"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate hydrolase subunit AbgB"
                     /protein_id="HCS1957479.1"
                     /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA
                     SALESAGFTVTRNVGYIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTP
                     GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV
                     FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANFPHLGRSALDAVTLMT
                     TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK
                     IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYHALSHFGTPEWNSEELAFTKQIQ
                     ATLPPNDRQNSLNNIAATGGENGKAFALRHRETVLANEVAPYAATDNVLAASTDVGDV
                     SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTLNLFIDSGL
                     LQECQQEHQQVTDTQPYHCPIPKNVTLSSLK"
     gene            11424..12950
                     /gene="abgT"
                     /locus_tag="OQQ57_002782"
                     /pseudo
     CDS             11424..12950
                     /gene="abgT"
                     /locus_tag="OQQ57_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
     gene            12961..13476
                     /gene="ogt"
                     /locus_tag="OQQ57_002783"
     CDS             12961..13476
                     /gene="ogt"
                     /locus_tag="OQQ57_002783"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HCS1957480.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLSDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            13671..14423
                     /gene="fnr"
                     /locus_tag="OQQ57_002784"
     CDS             13671..14423
                     /gene="fnr"
                     /locus_tag="OQQ57_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HCS1957481.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            14575..15525
                     /gene="uspE"
                     /locus_tag="OQQ57_002785"
     CDS             14575..15525
                     /gene="uspE"
                     /locus_tag="OQQ57_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HCS1957482.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFEPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
     gene            complement(15575..15833)
                     /locus_tag="OQQ57_002786"
                     /pseudo
     CDS             complement(15575..15833)
                     /locus_tag="OQQ57_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
BASE COUNT         4135 a         3949 c         3913 g         3960 t
ORIGIN      
        1 gatatgtcta aattaccaac aggtgtcgag attcgaggta aatacattcg catctggttc
       61 atgtttcgag gaaaacgatg tcgggaaaca ttgaaaggct gggagattac taacagtaac
      121 attaaaaagg ccgggaattt aagagcgttg atagttcatg aaatcagttc cggtgaattt
      181 gagtatttaa gacgttttcc ccagtccagc actggggcaa aaatggtgac aacgagggtc
      241 ataaaaacat tcggggagct ttgtgatatc tggacaaaaa ttaaagagac agagttaaca
      301 acaaacacaa tgaagaaaac gaaatcacaa ttaaaaacac tcaggataat aatttgtgag
      361 agtaccccga tatcgcatat tcgttatagc gatatcttaa actaccggaa tgaactgctg
      421 catggagaaa cgctttacct agataatcca agatccaaca aaaaaggaag aaccgtgcgc
      481 acagttgata gctatatcgc cctgctctgt tcgttgttac gttttgcgta tcagtcggga
      541 tttatatcaa ccaaaccatt tgaaggagta aaaaaattac agcgaaacag aataaaacct
      601 gacccgttat ctaaaacaga attcaatgca ttaatggaaa gtgaaaaagg acagagccaa
      661 aacttgtgga aatttgccgt ttactccggg cttcgtcacg gggaactggc agctctggcg
      721 tgggaggatg tggatttcga gaagggaatt gtgaatgtca gaagaaacct gacgatactt
      781 gatatgttcg gtcccccaaa aacaaatgcc gggatccgga cggtaacatt actgcagccg
      841 gctcttgaag cactgaagga gcaatacaaa ctgaccgggc atcatcgcaa aagcgaaatc
      901 actttttatc atcgggagta cggcagaact gaaaagcaaa aactgcattt tgttttcatg
      961 cccagggtgt gtaacgaaaa acagaaacct tattactcgg taagcagttt gggtgcaaga
     1021 tggaatgcag cagtaaaacg tgctggtatt cgccgccgta atccgtacca tacgcgacat
     1081 acttttgcct gctggctgtt gacggcagga gcgaacccgg catttatagc cagccagatg
     1141 gggcatgaaa ctgcgcaaat ggtgtatgaa atttacggta tgtggattga tgacatgaac
     1201 gacgaacaga tagccatgtt gaatgcgcgg ttatcgtagt tgcaaagttt gcccccaatt
     1261 tgccccattt agtaccagag aactgaaata atgcaagaaa atcaacaaat tacaaagaaa
     1321 gaacaataca gcctgaacaa attacaaaaa cgtctacgtc gtaacgtggg cgaagccatt
     1381 gctgacttca atatgattga agaaggcgat cgcatcatgg tttgcctctc agggggtaaa
     1441 gacagctata ccatgctgga gattctgcgc aatttgcagc aaagcgcgcc aatcaatttt
     1501 tcgctggtgg ctgttaacct cgatcaaaag caaccgggct tcccagaaca cgttctgccc
     1561 gtgtatcttg aaaagctggg cgttgagtac aagattgtcg aagagaacac ttacggtatc
     1621 gtgaaagaga agattccaga gggcaaaacc acttgctcac tgtgttctcg ccttcgtcgc
     1681 ggtatccttt atcgtaccgc aacggaactg ggggcgacga agatcgcgct gggtcaccat
     1741 cgtgacgata tcctgcagac gttgttctta aatatgttct acggcggcaa gatgaaaggt
     1801 atgcctccga aactgatgag cgatgatggc aaacatatcg ttattcgtcc gctggcctac
     1861 tgccgcgaga aagatattca gcgatttgcc gatgcaaaag cgttcccgat tattccgtgc
     1921 aacctgtgcg gttcacagcc taacctgcaa cgtcaggtga ttgctgacat gttgcgtgac
     1981 tgggataaac gttatccagg gcgtatcgag acgatgttca gcgcgatgca gaatgtggtg
     2041 ccgtcgcatc tgtgcgatac caacctgttc gatttcaaag gcatcaccca cggttctgaa
     2101 gtggttaacg ggggtgatct ggcgtttgat cgcgaagaga tcccactaca accggcgggc
     2161 tggcagccag aagaagatga aaatcagttg gatgagttac ggctgaatgt ggttgaagtg
     2221 aaataaccag gatagcgccc gatgcgcaag cgtatcgggc tactcttatg gaggccggat
     2281 aagacgcggc caacgtcgca tccggcaatg ccgaagaaga tgtttactct tgcacccggc
     2341 aattcaacat ttcattattt taataaccgc acccggcacg tttttccttt aatcttcccg
     2401 ccctgtaact gtttccatgc tttatgagca acagcctgac ggaccgcgac atagacatgc
     2461 gccggatgca cggcgatttt gccaatatct gcgccatcaa gcccgatatc tcctgtcagt
     2521 gcacctaata catcacccgg gcgcattttg gcttttttcc cgccatcgat acacaacgtt
     2581 gccatttctg cttccagcgg cacaatggaa ctattagctg gcggcgtttg ccagttaagt
     2641 tttatctgca acatgtcaga aatgatattg gcccgctgtg cttcttccgg agcacagaaa
     2701 ctgatcgcca gaccgctatt tcctgcacga gctgtacggc cgatgcgatg tacatgaact
     2761 tcagggtccc acgccagctc aaagttcacc accagctcaa gcgatttaat atccagacca
     2821 cgcgcagcaa catcagtcgc aaccagtaca cgggcgctac cgttagcaaa acgtaccagg
     2881 gtctgatcgc gatcgcgttg ctccaaatcg ccgtgtaatg acaatgcact ttgccctact
     2941 tcattcagcg cgtcgcagac agcctggcaa tcttttttgg tattgcaaaa caccacgcaa
     3001 gaggatggct gatgcaagct taataaccgt tgcaacagag gaattttgcc tttgctggat
     3061 gtctcataaa attgttgttc aatgggtggc aaagcatctg ttgagtcaat ttcaatcgcc
     3121 aaaggatcgc gttgcactcg tccgctgatt acggcgatgg cttccggcca ggttgccgaa
     3181 aacagaagcg tctgtcgaga tgcaggcgca aaacggatga catcatcaat ggcatcgcta
     3241 aatcccatat ccagcatgcg gtcggcctca tccatcacca aagtattcag cgcatccagt
     3301 gataccgtgc ctttttgcaa gtgatccagc aaacgacccg gcgttgccac gataatatgc
     3361 ggcgcatgtt gcaacgaatc acgctgcata ccgaacggtt gaccaccgca caacgtcaaa
     3421 attttggtat ttggcagaaa acgcgccagc cgacgcaatt cacctgccac ctgatccgcc
     3481 agttcacgcg taggacacag cactaaagcc tgggtttgaa atagcgacgc atcaatttgc
     3541 tgtaacaagc cgaggccaaa agccgccgtt ttgccgctgc cggttttcgc ctgcacgcga
     3601 acatcttttc cggcaaggat cgccggaagc gcggcggcct gcaccggcgt catagttaaa
     3661 taacccaact cattaaggtt cgtgagttgg gcgggaggca aaacattcag ggtagaaaaa
     3721 gcggtcacaa tctattctcg tggtcatcga cgcaaagtta gcaggcgcgt atcctcgcag
     3781 atctacgcgg gtggtgggtc aggcatgggt tgcgggcgag ggatcggatc gggcactgga
     3841 acaggatcgc caggaatcgg ttcagggaca ggaatttgca aataaataag tgtcgtcata
     3901 tttccctccg gtcattgggt ggactcttaa agggtagacg ctgataaata acaggcaaaa
     3961 aaaagccgac tcatcaaagt cggcgtcgta cgaatcaatt gtgctatgca gtaattcaaa
     4021 aaaggaagta agacaatatg gagcgcaacg cccatcgctt gacgttgcat tcacctgcaa
     4081 gggagatatt gccctgaatg ggtagagagt ttattgactt cgctcaaact ttgcggcgtt
     4141 tttgtataca gacagccgga aaaattgctt ttgttacaac catttactac gatgcaacca
     4201 taaagcaaca ccaccaataa gaacaactaa cagaatacaa aaaattgaaa atccgaattg
     4261 ccacccgccg ccagggatcc caccaaggtt gacgccaaat aaccctgtca gaaaggtact
     4321 gggtaaaaag accattgcca tcaatgacat tgtataggta cgacgagcta aattttcctg
     4381 catcacctga gcgatttcat ccgccatcac gccagtccgt gctatacagg cgtcgatttc
     4441 gtcaagaccg cgcccaaggc gatcggcaat atcctgcatc cgacggcgtt ggtcatcgct
     4501 catccacggc aaacgttcac tggcaagacg agcataaaca tcacgttgcg gtgccatata
     4561 gcgacgcatc acgattaatt gtttgcgcag cagagccagg aatccacgcg gtggaatttg
     4621 ctgatcaagg agattatctt caaggtcgat aattttatcg tgcagctgct cgataaattc
     4681 gctggaatga tcggtcaacg catcgcacac atccaccagc caccctccgc aatcggtcgg
     4741 acccgtgccc tcttccagat cgctcaccac atcgtccagc gccagcactt tgcgttgtcg
     4801 ggtcgaaaca attaaccgcc cgtccatata tacacgcatg gcgaccagtt gatcggggcg
     4861 ttcatcggtg ctgccgttta tacagcgcaa tgtaatcagc gtgccttcac cgagacggct
     4921 gactcggggc cgtgtgctct cgcctgccag cgcatcacgt acgttattgg gaagcagcgg
     4981 tgttgtcgcc agccattggg cgctatcatg gtgtacataa ttaaggtgga gccagcaggg
     5041 atgcgcttca tcaatcacat ctgtattttc cagcggttta acgccgcctc taccatccag
     5101 catccaggca aatactgcat ccgggacatt aacgtccgat cccttaatcg cttccacagt
     5161 gcctccatca tcaacgcatt attttgtagt ctagccttct ggccctgtta cgcaacatct
     5221 catcacccca ttaccctgaa atgattaata aaattctgtc taaattgaat acaaaaagca
     5281 aaatgctttt ccgtatacaa accgtgtgaa gtgttaaata gcgtctatca ttatcagaat
     5341 tatctgatca tatgacgtgg cttttttgcg atcggatagc aacaaaaatt gataaaaata
     5401 acgggatctc aatgattacg cacaacttca ataccctgga cttactcacc agtcctgtct
     5461 ggattgtttc gccctttgag gaacagttaa tttatgccaa tagcgcggcg cgactgttga
     5521 tgcaagacct cacgtttagt cagctacgaa ccggacccta ttccgtctcc tcacaaaaag
     5581 aactgccgaa atacctctcc gatctgcaaa accaacacga tattatcgaa atcctcactg
     5641 ttcagcgtaa agaagaggaa acagcattaa gctgtcggct tgttttgcga gagctgacag
     5701 aaacagaacc ggtgattatt ttcgaaggta tcgaagcgcc ggcaacgctg ggtttaaaag
     5761 ccagtcgctc ggcaaattat cagcgcaaaa aacaaggttt ttatgcgcgc ttttttctga
     5821 ctaactctgc accaatgttg ttgattgacc cctcacgaga tggccaaatc gtcgatgcta
     5881 acctcgccgc gctcaatttc tacggttata accatgaaac gatgtgccaa aaacatacct
     5941 gggaaattaa tatgctcggg cgtcgcgtca tgcctatcat gcatgaaatt tcgcatttac
     6001 ccggcggtca taaacctttg aattttgttc ataaactggc ggatggatct actcgtcatg
     6061 tgcagaccta tgccgggccg attgaaattt atggcgacaa gctcatgtta tgtattgtgc
     6121 atgatattac tgagcaaaaa cggctggagg agcagctgga acatgctgct caccatgacg
     6181 cgatgaccgg attactgaat cggcgacagt tttatcacat tacggaacca ggccaaatgc
     6241 agcacctcgc catcgcccag gattacagct tgttgctcat cgacaccgat cgttttaaac
     6301 acattaacga tctctatggg cattctaaag gtgatgaggt gttatgcgcc ctcgcccgca
     6361 ccctcgaaag ttgcgctcgc aaaggcgatt tggtgtttcg ttggggaggc gaagagtttg
     6421 tcttattgct accaagaacc ccactggata ccgcgctttc gctggctgaa actatccgtg
     6481 taagcgtggc caaagtgagt atttcgagct taccacgttt taccgtcagc attggtgtgg
     6541 cgcatcacga aggaaatgaa agcatcgatg aactgtttaa acgcgttgat gatgctttgt
     6601 atcgggcgaa aaatgatgga cgcaaccgcg tgctggcggc ataagccgcg gatgcgtctc
     6661 gagatcaacg gctgcgctta gcgtggcgct cccagttttc ttgcttcgcc tgcgccgttt
     6721 tacgtagtgc gacgtaacac gccccgctgc cgccatgatg cggtagcgcg gtgcaatatg
     6781 cctgaacatc atcaaattcg gtcagccagc gcgccacata gctgcggaca atattggcat
     6841 gcgatttatc ttcccgccct ttaccatgaa taatcagcac attacgcaaa ccatccgcca
     6901 gggcttggtg aatgaaactg aacaccattt tgcggcactc ttccaccggc tggcgcaaaa
     6961 gattcaggct cgcctgttgc ggatatttac cactgcgcag cttatccagc accccatgtt
     7021 gcaacccttc ccgccgaaac tccagcggct gacttagcgg gatgatgtcg agaaatccgg
     7081 tggtgaggaa attatcaagc tgcagcgtgt cgatacgctg cggcgcacgt tggttacgcg
     7141 ttggatgcca gtggacatct gtagcacgtt tcagcggctg gacatcttcc atggcgtcaa
     7201 gaaacagcga tttgtcgtca aggttcatgt tacatcctcc cgcaattaag agcgcgatat
     7261 gataaccaga ccgggtcggt ccaacaacgt attaccaaaa attccagtaa taagttccaa
     7321 atattgccga tattttaagc aaaatgctta tgcatgatta ttcattcacg atattaataa
     7381 tgtaacttat attttcgtga aatctgtcac tgaagaaaat tggcaactaa aggttaaaac
     7441 cgttataaca cagtcaccgg cgcagaggag acaatgccgg acttaagacg cggatgcact
     7501 gctgtgtgta ctgtagagtc tggcggatgt cgacagactc tattttttta tgcagtttta
     7561 actttgcaga tagccgcatt ctcgccggaa ttgcgtgatt aatgacgggg tcagtggtgt
     7621 ctggcgacta tcacgccgct gaatcaaata ataggccgct ttcggtaaaa tttcgctaac
     7681 cggcaacatc accagcccct gtccgtgcaa gggatcgcag cccatttctt caggcagtat
     7741 gctgagaaaa tcgctttttg ccaccagact gatacaggct gagaacgtct cgcagactac
     7801 accgacctgt ggcgtttgcg cctgatcgtc aagcaattca ctcaactgtt tgtagtaact
     7861 gccgtgtggc gtcggcattg tccagctgta atccagtaac tgtttgatcg aacgggcacc
     7921 aatggcgggg tgtcccgggc ggcaaaagat cgcgaattgc ttttccagta atttctcaaa
     7981 agtaaattcg tggtcgtacg gtccctgata ataggtattg atggtgaaat ccaattctcc
     8041 ctgacgcaat tcattaatca tcgacaccag ttgcccttcc ataatgcgta cttttacctg
     8101 cggatgctgc tgatgaaaac gagatatgac agctggcatc agactgcggg aaatactggc
     8161 ccccatgccg atattaatct gccctgccag ttgcccttgt cgttggcgaa tatcctcttg
     8221 ggctgcgcgc agctcttcaa gaataagact ggcgtgctga taaaaacttt caccggcatc
     8281 agttaacgtc acgcctttac tacggcgaaa aaagagttgc gccgctaatc cttcttccaa
     8341 ctcctgaata gatttactca gtgccggttg cgacatattc aacattcggc tcgctccgcg
     8401 aatgctgccc tgacgagcca cttcaacaaa agcacgaatt tgatgaattt ttacctgaaa
     8461 agccatgacg ccaccgataa ccgttattta tcagaccaaa gaaactggca tctactttaa
     8521 tgcagatgat tgtgtcaggg taatttatga acggttaaaa ctgtgaaaaa tcagttagtg
     8581 ataagtaaaa actatcgcta cgtgaaccgg gtcacacttt ttactgatga cgggaaaggt
     8641 tatggagtct ttgaatcaat ttgttaattc gcttgcccca aaattatcgc actggcgacg
     8701 tgattttcat cactatgcag agtctggctg ggtggaattc cgcactgcca cccttgttgc
     8761 ggaagaattg cagcagctcg gctattcact ggcgctgggc cgcgaagtag ttaatgaaag
     8821 tagccggatg ggactacctg atgaactcac tctacaacgc gaattcgagc gcgctcgtca
     8881 acagggtgcg ctagcacaat ggattgcggt ttttgaaggt ggtttcactg gtatcgtcgc
     8941 caccctggat accggtcgcc ccggtccggt gatggctttc cgtgtcgata tggacgcgct
     9001 ggatctcagt gaagagcagg atgtcagcca tcgcccctac cgcgacggtt ttgcgtcatg
     9061 taacgccgga atgatgcatg cctgtggtca tgatggacat accgccattg ggcttgggct
     9121 agcgcatacc cttaaacaat tcgagtccgg actacatggc gtcatcaaac tgatttttca
     9181 gcctgcagag gaaggtacgc gtggcgcgcg ggcgatggtc gatgcaggtg tcgtagatga
     9241 tgttgattat tttactgccg tgcacattgg cactggcgta cctgcgggca ccgtggtgtg
     9301 cggcagtgat aattttatgg caaccaccaa atttgacgcg cacttcaccg gtaccgccgc
     9361 tcacgcaggc gcaaaaccag aagacggtca caatgccttg ttggcggcag cacaagccac
     9421 tcttgcactg catgcaatcg ccccggagct tccagagtaa acgtgggcgt tatgcaggca
     9481 ggaagcggtc gtaacgttgt tcctgcctcg gcgttgctga aagtggaaac acgcggggcc
     9541 agcgacgtca ttaatcaata tgtttttgac cgtgcacaac aagcgattca gggcgcagca
     9601 accatgtatg gtgtcggcgt tgaaactcgt ctgatgggtg cagctaccgc cagttctcct
     9661 tcgccgcaat gggtcgcatg gttgcaaagt caggcggctc aggtcgcggg gggcaatcag
     9721 gccattgaac gtgttgaagc gcctgcgggt tccgaagatg ccacattaat gatggcccgc
     9781 gtgcagcaac atcaagggca agcctcctac gtggtgtttg gcacacagct ggcggcaggt
     9841 catcacaacg aaaaattcga ttttgacgag caggttctcg ctattgccgt cgaaacgctg
     9901 gcgcgcaccg cgctcaattt tccctggacg cgaggtatct gatgcaggaa atctatcgtt
     9961 ttatcgacga tgcgattgaa gccgatcgcc aacgttatac cgatattgcc gatcaaatct
    10021 gggatcatcc agaaacacgt tttgaagagt tctggtcagc ggagcatctg gcttcggcgc
    10081 tggaatctgc aggcttcacc gttacccgca acgtaggcta tatcccaaat gcctttattg
    10141 cttcgtttgg tcaaggcaaa ccggttatcg ccctgctggg agaatatgac gccctggcag
    10201 gtttaagtca gcaagcaggt tgcgcgcaac ctacatccgt gacgcccggt gaaaatggtc
    10261 acggttgcgg acacaatttg ctgggaaccg ccgcctttgc cgctgcaata gccgtcaaga
    10321 aatggctgga acaatatggg caaggcggca cggtgcgctt ttatggttgt cctggcgaag
    10381 aaggcggctc gggtaaaacg ttcatggttc gcgagggggt atttgatgat gtggatgcgg
    10441 cactcacttg gcacccggaa gcctttgccg gtatgttcaa tacccgcacg ctggcaaaca
    10501 ttcaggcatc atggcgcttt aaagggatcg cagcacatgc cgcgaatttc cctcatttgg
    10561 gacgcagcgc ccttgatgcc gtaacgttga tgaccactgg caccaacttc ctcaacgaac
    10621 atattattga aaaagcgcgc gtacactatg ccatcacaaa tagcggcggg atctcgccca
    10681 acgtggtcca ggcgcaggca gaagtgcttt atcttatccg cgcccccgaa atgaccgacg
    10741 tgcagcatat ttatgatcgg gtcgccaaaa tcgccgaagg tgcggcattg atgaccgaaa
    10801 ccacggttga atgccgcttc gacaaagcct gttccagtta tctcccgaat cgcaccttag
    10861 aaaatgccat gtaccatgcc ctatcccatt ttggtacccc ggaatggaac tccgaagaac
    10921 tggcttttac gaaacaaatt caggctacgc tcccccccaa cgatcggcaa aacagtctga
    10981 ataatatcgc cgcaaccggt ggcgaaaacg gcaaggcttt tgcactacgt catcgtgaaa
    11041 cggtactggc gaatgaggtc gctccatatg ccgccaccga taacgtgctt gcggcatcga
    11101 ctgatgtcgg cgacgtcagt tggaaactgc ctgttgccca gtgtttcagc ccctgttttg
    11161 ccgtcggtac accgctacat acgtggcaac tggttagcca ggggcgaaca tctattgctc
    11221 ataaaggaat gctgctggcg gcgaaaacta tggcagcaac cacactcaat ctcttcattg
    11281 attcagggct attgcaagaa tgccaacaag agcatcagca agttacggac acgcaaccgt
    11341 atcactgccc tatcccaaaa aacgtgacac tgtcatcttt aaaataacaa caacaacgca
    11401 aacacaacaa ccgaggaatg cccatgagta tgtcatccat accgtcgtcc tcctaatccg
    11461 ggaagctcta tggctgggtc gaaagaattg gtaacaaggt tccccatcct tttttgctct
    11521 ttatctattt gattatcgta ctcatggtga cgacggcaat tttgtcggcc tttggcgtca
    11581 gtgcgaaaaa cccgaccgat ggaacgccgg tggtggtgaa aaacctgctc agtgtggaag
    11641 gattacactg gtttttaccc aatgttatta aaaactttag cggttttgct ccacttggtg
    11701 cgatcctggc gctggtttta ggtgccggtc tggcggagcg cgtcggctta ctgccagcgc
    11761 taatggttaa aatggcatcg catgttaatg tccgctacgc cagttatatg gtgctgttta
    11821 ttgctttttt cagccacatt tcttccgatg cggcgttagt gatcatgcca ccgatgggtg
    11881 cgctgatttt tctggcggtg ggcaggcatc cagttgcagg tttactggct gccattgcag
    11941 gcgtaggttg cggctttacg gctaatttac tgattgtcac aaccgacgtg ttgctgtcgg
    12001 ggatccgcac ggaagcggcg gctgcgttca atccgcaaat gcacgtcagt gtaattgata
    12061 actggtattt tatggccagc tccgtagtcg tactgacgat tgttggcggc ctgataaccg
    12121 acaaaatcat cgagccacgg ttaggtcaat ggcagggaaa cagcgatgag aaactgcaga
    12181 cattgaccga aagtcagcgt tttggtttac gcatagcagg tgtcgtatcg ctacttttta
    12241 ttgctgcgat cgcgctgatg gtgatcccgg aaaacgggat attgcgcgat ccgattaatc
    12301 acaccgtgat gccatcaccc tttattaaag gtatcgtgcc actaatcatt ctttttttct
    12361 ttgtggtttc gctggcttat ggcatcgcta cccgcacaat tcgacatcag gcggatttac
    12421 cgcatttaat gattgaaccg atgaaagaga tggcgggatt tatcgtgatg gtttttcccc
    12481 tcgcccagtt tgtcgccatg tttaactgga gcaacatggg gaaattcatc gccgtggggc
    12541 tgaccgatat actggaaagt tcagggctta gcggcatccc ggcgtttgtc ggtctggcgt
    12601 tgctttcctc tttcttatgc atgtttattg ccagtggttc cgcaatctgg tcgattctgg
    12661 cccccatttt cgtaccaatg tttatgctac ttggctttca cccggcattt gcgcaaatcc
    12721 tctttcgtat tgccgactca tccgtattgc ctttagcgcc ggtatctcct tttgttccac
    12781 tgtttcttgg attcctgcaa cgctacaaac cagacgcgaa actgggtact tactattcgt
    12841 tagtcttgcc ctatccgctt atctttttgg tggtatggct gctgatgttg ctggcgtggt
    12901 atcttgttgg tctgccgata ggtccgggga tttacccacg tttgtcttaa gagagaacgg
    12961 atgctgagat tacttgaaga aaaaattgcc acgccactgg gtccactgtg ggtgatttgc
    13021 gatgagcaat ttcgcctgcg ggcggttgaa tgggaagagt acagcgaacg catggtgcag
    13081 ctgctggaca tccattatcg caaagaaggc tatgagcgca tttctgccac caacccaggc
    13141 ggtttaagcg acaagcttag tgattatttt gccggtaatc ttagcattat tgatacgctt
    13201 cccactgcca caggggggac gccatttcag cgcgaagtct ggaaaactct acgcactatc
    13261 ccctgcgggc aggtaatgca ttacggccaa ctggctgaac aattgggccg ccctggcgcg
    13321 gcgcgtgccg ttggtgcggc aaacggatcg aatcccatca gcatcgtcgt accttgccat
    13381 cgggttattg gccgaaacgg caccatgacc ggatatgcag gcggagttca gcgaaaagag
    13441 tggttattgc gccacgaagg ttatcttttg ctgtaaacat taaacaattt gtgccagctt
    13501 gttcacactt ttatgtaaag ttacccttaa caacttaatg gttttcaaat agatagacat
    13561 atatttacat ctaatatcgg aattctctgc tgttaaggtt tgcttagact tacttgctcc
    13621 ctaaaaagat gttaaaattg acaaatatca attacggctt gagcagacct atgatcccgg
    13681 aaaagcgaat tatacggcgc attcagtctg gcggttgtgc tatccattgc caggattgca
    13741 gcatcagcca gctttgcatc ccgttcacac tcaacgaaca tgagcttgat cagcttgata
    13801 atatcattga gcggaagaag cctattcaga aaggccagac gctgtttaag gctggtgatg
    13861 aacttaaatc gctttatgcc atccgctccg gtacgattaa aagttatacc atcactgagc
    13921 aaggcgacga gcaaatcact ggtttccatt tagctggcga cctggtggga tttgacgcca
    13981 tcggcagcgg ccatcacccg agcttcgctc aggcgctgga aacctcgatg gtatgtgaaa
    14041 tcccgttcga aacgctggac gatttgtccg gtaaaatgcc gaatctgcgt cagcagatga
    14101 tgcgtctgat gagcggtgaa atcaaaggcg atcaggacat gatcctgctg ttgtcgaaga
    14161 aaaatgccga ggaacgtctg gctgcattca tctacaacct gtcccgtcgt tttgcccaac
    14221 gcggcttctc ccctcgtgaa ttccgcctga cgatgactcg tggcgatatc ggtaactatc
    14281 tgggcctgac ggtagaaacc atcagccgtc tgctaggtcg cttccagaaa agcggtatgc
    14341 tggcagtcaa aggtaaatac atcaccatcg aaaataacga tgcgctggcc cagcttgctg
    14401 gtcatacgcg taatgttgcc tgatttttcc gcataactca ctatccttct gtcatatcat
    14461 taaatttttc tgatttattg atctggcaga aggttcatca ctgtttcatt caccagatat
    14521 gggttaatct tttaattaca aactgcgttg acagttgttg taaggagacc ctgtatggct
    14581 atgtatcaga acatgctcgt tgttatcgat cctaaccagg acgaccaacc agcattgcgg
    14641 cgagctgttt atttacatca acggattggt ggcaaaatta aagccttttt gccgatctat
    14701 gacttctcat acgaaatgac caccctgctc tccccggacg aacgtaccgc tatgcgtcag
    14761 ggcgtcatca gccagcgtac agcctggatc cacgagcagg caaaatatta tctcaatgct
    14821 ggcgttccca ttgaaattaa agtggtctgg cataaccgtc ctttcgaagc catcattcag
    14881 gaagtgatca gcggcgggca cgatttggtg ctaaaaatgg cgcaccaaca tgaccgtctg
    14941 gaagcggtga tttttacgcc aacggactgg catctgttac gcaaatgccc aagcccggtg
    15001 tggatggtga aagaccagcc gtggccggaa ggaggtaagg cgctggtggc ggtgaatctc
    15061 gccagtgaag agccgtatca taatgcgctc aatgaaaaac tggtcaaaga gacgatcgaa
    15121 ctggcagaac aagtcaacca taccgaagtt catctggttg gcgcttaccc agtaacgcca
    15181 attaatatcg cgattgaact gccggaattt gagccgagcg tttataacga tgccattcgt
    15241 gggcaacatt tgctggcaat gaaagccctg cggcagaaat tcggcattaa tgaaaacatg
    15301 acgcacgtag aaaaaggtct gcccgaagag gttattcctg atttggcgga gcacttacag
    15361 gcggggattg tggttctggg cacggtagga cgcaccggta tttcagcagc attcctcggc
    15421 aacacggcgg aacaggtgat tgatcatctt cgctgcgatc tgttggtcat taaacctgac
    15481 cagtatcaga cacccgttga actggatgac gaagaagacg attaacgact cttcaataac
    15541 tgacaaggcc cgagttatcg ggcctatttt ttacttactg ctcttcgccg ccaaggaaat
    15601 aaattcccaa cgggattgcc agcaacacag taaagaccag gctataaaca aaaatcatcg
    15661 atgactgaat cacatacatt gatgtcgtcc actcagacag cggaatattg tactgttcta
    15721 taacgccgcc gatagtcgcg cgagtcacaa ccgacgccgc aataatgaca aaccgccaac
    15781 aaaccaaaga gaaatttctt ccctttcgct gacttcagtt tcgccataat catgatgtaa
    15841 tccttgtgca gacaaatttc ttgttaccta aacgtaacaa taccatgaca tttcaccgtt
    15901 gtctgctctg aaaacctcac ctcttagctg gatttacaat caacgcattg attagtt
//
LOCUS       DAJVUK010000099        15299 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.099, whole genome shotgun sequence.
ACCESSION   DAJVUK010000099 DAJVUK010000000
VERSION     DAJVUK010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15299
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.099"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(7..450)
                     /locus_tag="OQQ57_002787"
     CDS             complement(7..450)
                     /locus_tag="OQQ57_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCS1957483.1"
                     /translation="MAELQKVDDWLSALLANLEPAARSRMMRQLAQELRRTQQQNIRM
                     QRNPDGSSYEPRRVTARSKKGCIKRQMFTKLRTTKYLKTAASADSASVQFEGRVQRIA
                     RIHHYGLSDRVSRKGIYTIYAKRQLLGFNVQSIELIERMFIKNLT"
     gene            complement(443..874)
                     /locus_tag="OQQ57_002788"
     CDS             complement(443..874)
                     /locus_tag="OQQ57_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957484.1"
                     /translation="MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVASGASSMSW
                     EYRYTLNVVIEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVC
                     DISLNLQLTERVLVSTDGSVSNVEAVAEPDEPEEMWTVKRG"
     gene            complement(970..1398)
                     /locus_tag="OQQ57_002789"
     CDS             complement(970..1398)
                     /locus_tag="OQQ57_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HCS1957485.1"
                     /translation="MNRLLLVVLALLLAALGWQTWRLADASQTISTQADELQSKSQAL
                     AKSNSQLISLSILTETNNREQARLYAEAEQTSVLLRQRQRRIEELKRENEDLRRWADT
                     PLPADIIRLRERPALTGGAAYRQWLSASDAVSAGAGSAAH"
     gene            complement(1395..1772)
                     /locus_tag="OQQ57_002790"
     CDS             complement(1395..1772)
                     /locus_tag="OQQ57_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957486.1"
                     /translation="MKKKLISGLFLMLWMALLIAAMVYPQGIFPVLAASGVWVACLLT
                     WAVIPVALASLIKNGPLWQELRASLLKTITRKENVFISWVIRLLIVVSLAWTGWAITL
                     VFYLLTVIAFWITHNQMAQQVAA"
     gene            complement(1774..2286)
                     /locus_tag="OQQ57_002791"
     CDS             complement(1774..2286)
                     /locus_tag="OQQ57_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCS1957487.1"
                     /translation="MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVIPGKTITERQAAEGLISNVLRVERALEKCVKQQPPQK
                     VYDAAVSFAFNVGTGNACSSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAR
                     EMAWCLQGAN"
     gene            complement(2267..2482)
                     /locus_tag="OQQ57_002792"
     CDS             complement(2267..2482)
                     /locus_tag="OQQ57_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957488.1"
                     /translation="MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAI
                     NWYYKHKAYQLLRDGQISREDYESINR"
     gene            complement(2486..2689)
                     /locus_tag="OQQ57_002793"
     CDS             complement(2486..2689)
                     /locus_tag="OQQ57_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HCS1957489.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLP
                     HGLQVELPDIPTTTTVQTVQLWD"
     gene            complement(2689..3153)
                     /locus_tag="OQQ57_002794"
     CDS             complement(2689..3153)
                     /locus_tag="OQQ57_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HCS1957490.1"
                     /translation="MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPR
                     LKQVALSAISEVNAELYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWAR
                     AMLNERFQDYDATASGAKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            complement(3249..3899)
                     /locus_tag="OQQ57_002795"
     CDS             complement(3249..3899)
                     /locus_tag="OQQ57_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HCS1957491.1"
                     /translation="MSLSPARQHRLRVQAEQAVREGGSVRHASGYDLMLLQLAEDRRR
                     LKGVQSTVKKAEIKVELLPKYAAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALE
                     IGRHALRHGWVMPLGNRNVQTVLTEEMADAAQSAMLAATGFDADLLLQTLELTDGLDM
                     PDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR"
     gene            complement(3903..4961)
                     /locus_tag="OQQ57_002796"
     CDS             complement(3903..4961)
                     /locus_tag="OQQ57_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HCS1957492.1"
                     /translation="MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQ
                     IQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
                     PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNE
                     LIDVVYQDDDDLVVICGRELLSDKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRA
                     PFFPPNALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAAL
                     VENIQISDFSAAAAETGA"
     gene            complement(4978..5811)
                     /locus_tag="OQQ57_002797"
     CDS             complement(4978..5811)
                     /locus_tag="OQQ57_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HCS1957493.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALIN
                     LEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKL
                     FTFMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
                     AAEETVIELEEVQDDKPSLFARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSAR
                     TEKSLSEQEERLSELETALQAQQTAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTN
                     C"
     gene            5954..7720
                     /locus_tag="OQQ57_002798"
     CDS             5954..7720
                     /locus_tag="OQQ57_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HCS1957494.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNG
                     GNEADLNPNVANRNKGPRRQPEKNVFTDDQIEKLEKIFHSSMFNYQRHWWEAGKTNRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHSNLAPGRLCADGQYRQIVT
                     VEDAVRGACNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVW
                     TDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGESANTSNIVEIF"
     gene            7720..8316
                     /locus_tag="OQQ57_002799"
     CDS             7720..8316
                     /locus_tag="OQQ57_002799"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957495.1"
                     /translation="MGKSKKNRAAATKQTQHKNQTSAEAFSFGDPVPVLDRRELLDYV
                     ECVQTDRWYEPPVSFDGLARTFRAAVHHSSPIAVKCNILISTYIPHPLLSQQAFSRFV
                     QDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
                     SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRR"
     gene            8350..8751
                     /locus_tag="OQQ57_002800"
     CDS             8350..8751
                     /locus_tag="OQQ57_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1957496.1"
                     /translation="MYMTDAAQNQEDVNNLRNAMKSAKGPGNFRNLFMYSPNGKKDGL
                     QIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKASLEFVR
                     NELIPLQKRMMEINKLVSENIVKFDSYKLAT"
     gene            complement(8858..9739)
                     /locus_tag="OQQ57_002801"
     CDS             complement(8858..9739)
                     /locus_tag="OQQ57_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957497.1"
                     /translation="MKWAIEMNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFIL
                     NAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSIIDDIRAANSNSLCPMC
                     GSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNIL
                     KQRLICANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESF
                     YLYPELVIRGLNKSLSTYSDVYELLTRELLLLDEKHKGKNNWNSVFVAGLIRPDVIRW
                     ILCELHLGNRSPDGRLI"
     gene            complement(9723..11372)
                     /locus_tag="OQQ57_002802"
     CDS             complement(9723..11372)
                     /locus_tag="OQQ57_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000960487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCS1957498.1"
                     /translation="MLVKKNKNYSLYFLITNNQQISDSGNYIKIVPSRSDWNDFGYLS
                     RVEISIFNKKECKDIISLNGYIGFLNSEEERNGKAELIRRVKKKEESNLKDEGFNDYF
                     VMLQDMNNYRRLVRFFGVNESKYILNFINDVVSKKSDASAENLRKKAISSDIFNKSFI
                     RESESYFTFKNAGTVLSGIQYEELGNLSQHIKISYSNKVNEEDVSYVFNFDHEHDLPK
                     RISIIIGENGVGKSQTLREIALAAIKGKDNLVAVVDSNGVSIEERIQISRLIAFSPTN
                     ESKCSFPTDKRIKSLIWYKRLTLNRESKSKLNLNDLIVQLARSNDAIGYNQRWNIFVD
                     ALSVLNSNNDLVIKCGGENSPFVKLNELNSRGEESRLSLYSEIILSGEPLRLIENKCY
                     PLSSGEISFIKFCVQVCLYIENGTLLLIDEPETHLHPSFINKFMALLDNLLEKTGSSA
                     IIATHSVYLVREVFKEQVTILRRRDDGVIVSEKPRLSTFGANIGNISYFVFGESEPTQ
                     ILNKVKNNIIAKNMSWDDVESKYSEDLSLNVLTALRNEMGN"
     gene            complement(11665..11898)
                     /locus_tag="OQQ57_002803"
     CDS             complement(11665..11898)
                     /locus_tag="OQQ57_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HCS1957499.1"
                     /translation="MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGS
                     SNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH"
     gene            complement(11909..12097)
                     /locus_tag="OQQ57_002804"
     CDS             complement(11909..12097)
                     /locus_tag="OQQ57_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957500.1"
                     /translation="MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDE
                     LMAKIRTHEYNRSMDVIS"
     gene            complement(12251..14665)
                     /locus_tag="OQQ57_002805"
     CDS             complement(12251..14665)
                     /locus_tag="OQQ57_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HCS1957501.1"
                     /translation="MSHADMNNCCGFNEAAAAFSWNSPKKAINPYLDPAEVAPVSALS
                     NLITLYAADNEQEQLRREALSDQVWERYFFYESRDPVQHEMEQDKLISRAKLAHEQQR
                     FNPDMVILADVNAQPSHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRD
                     SQLSASFRFMASHVGLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDV
                     KPEEIRKTWEKVAAETLRLDVIPPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWY
                     RKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAVMHKREQRRKSLEFFRSHELVNEEG
                     DTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNN
                     GRPNPTWTNATVRQSSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCF
                     MRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNID
                     GRGLAGEISKETGKSLRDNAEYVNPWASLHRVQQFRFFGIPGRQAYRELRLLAGQAAR
                     QQGDKKAGAPVLDNPRLDAILAAADAGCFATYIMRQGGVLVPRKYHLIRTAYEINEEP
                     TAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCL
                     LAENLNQQEKDKSADGNPRTDITSMDDKELHDYLHSMSKKERRELAARLRLVKPKRRK
                     DYKQRITDHQRLQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLQEDD
                     QWRNLY"
     gene            complement(14662..>15299)
                     /locus_tag="OQQ57_002806"
     CDS             complement(14662..>15299)
                     /locus_tag="OQQ57_002806"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HCS1957502.1"
                     /translation="RVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYR
                     GLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFICASFDETLAMLKAGDVV
                     YCDPPYDGTFSGYHTDGFTEDDQYHLASVLEHRSSEGHPVIVSNSDTSLIRSLYRNFT
                     HHYIKVKRSIGVAAGEGKSATEIIAVSGPRCWVGFDYSRGVDSSAVYGVRA"
BASE COUNT         3732 a         4136 c         3523 g         3908 t
ORIGIN      
        1 taaaaatcaa gttaggtttt taatgaacat tctttcaatt aactcaatag attggacatt
       61 aaaacctaat aactgccttt tcgcatagat ggtataaata ccttttcgac tgacgcgatc
      121 actcaagccg taatggtgaa tacgggcaat gcgctgcacc ctaccttcaa actgtacgct
      181 ggcagaatcg gcgctggctg cagttttcag gtattttgtg gtgcgcagct ttgtaaacat
      241 ctgacgtttg atgcacccct ttttgctgcg tgctgttacc ctgcgcggct cataactgct
      301 gccatcagga ttgcgctgca tcctgatgtt ctgctgctgt gtccggcgca gttcctgcgc
      361 cagctggcgc atcatgcggc ttcttgcggc tggctccaga ttcgccaata atgcactcag
      421 ccagtcgtcc accttctgca attcagccac gtttcaccgt ccacatttct tcaggttcat
      481 caggttccgc taccgcttca acgttcgaca cactgccgtc agtgctgacc agcacacgct
      541 ccgtcagttg caggttaagg ctgatatcac agacatcgtt gcgcagaata tccacctcaa
      601 aggtgaatag cttttcccgt aacgccgggt tattgatcgc atcgggctgg ttatcccgca
      661 gccacagcaa aaccggggcc atcagcagat tctggtcgcc gctgaaatct tcaatcacca
      721 cgttcagggt gtagcggtac tcccatgaca tggagctagc cccggaggca accagcgaac
      781 cgttatccac aaacagatgc agtttgtccg ggttattacg gacataaggc actgctttat
      841 tgagggcgtg gcgcagggat tgtggtttgt tcactgtttc gctcctgaca cgcaataatc
      901 atgtccactt tgtctgcaca gaccgcccag gcggcctccg tttcatccag caacgcattc
      961 agatcaccgt tagtgcgcgg cgctgcctgc tccagccgac acggcgtcac tcgcggacaa
     1021 ccactgacgg taagctgcac ctccggtgag tgccggacgt tcccgcagcc ggataatgtc
     1081 agcaggcaaa ggagtatcag cccagcgacg taaatcctcg ttctcacgtt tcagttcctc
     1141 aatccggcgt tgtcgttgtc tcagcagtac actggtctgt tctgcttcgg catagagccg
     1201 cgcctgctcc cggttattgg tttcagtcag aatggacagg ctgataagct ggctgttgct
     1261 ctttgccagt gcctggcttt tgctctgcag ctcgtctgcc tgcgtgctga tggtctggct
     1321 ggcatcagcc agccgccacg tctgccagcc cagcgccgcc aataataacg ccagcacaac
     1381 cagcagcaac cggttcatgc ggctacctgt tgcgccatct gattatgggt gatccagaag
     1441 gcaataacgg tcagcagata aaagaccagg gtaatggccc accccgtcca ggcgagactg
     1501 acgacaatca gcaatcgtat cacccagctg ataaatacgt tttcttttcg ggtaattgtc
     1561 ttcagtaaag atgccctcaa ctcctgccag agcgggccat tcttaattaa cgaagccagt
     1621 gctaccggaa ttaccgccca tgtcagtaaa caggctaccc aaacgccgga cgctgccagt
     1681 accggaaaaa tcccctgcgg atacaccatt gctgcgatta acagcgccat ccataacatc
     1741 agaaacagcc cgctgattaa tttctttttc atttcagttt gctccctgta aacaccaggc
     1801 catctcccgc gcacggcggt tatccagccc ctgattaaaa acacctttca cataaaccca
     1861 gcgcggcaac tgtcggcacg catccgccca gcgccgctga ttgagcaatt tcaccagcgt
     1921 ggaactgcag gcattgcccg tacccacgtt gaaggcaaac gacaccgcag cgtcatacac
     1981 cttctgcggc ggctgttgct tcacacactt ttccagcgcc cgctccacac gcagcacgtt
     2041 ggagatcagc ccttctgctg cctgtcgctc cgtaatggtt ttgccgggaa tgacgcccga
     2101 cgtattacca ataccgtcgg tccagacacc cgcgctgcac tgatacggct gcagacgaca
     2161 accttcgtaa tcggcaatca gtttcagtcc ctccacggag gtgtgaagct gctgaaaacc
     2221 cggcagcgtg gcagcaatag ccagcacggc cccgacaagg cagcgtttaa cgattgatgg
     2281 attcatagtc ctcccgcgag atctgcccgt cgcgcagaag ctggtaggct ttgtgtttgt
     2341 agtaccagtt gatagccagc atcagcacac caatcatcag gccgcccagc gttgaggcat
     2401 ccttgatgga caaatcgccc agccaggcca gcacgacggc gatgcaatac gtgataaagg
     2461 cgctgattcg ctcaagcgtc ataattcagt cccatagctg gacggtctgc acggtggtgg
     2521 tggtcggaat gtccggcagc tccacctgca gcccgtgagg taaaaagggg ccgtattcgg
     2581 caagccccgg atttgccttc agtacctgct ccgtgacacc ctgcgtgcgc ccgtaatgac
     2641 gccagcaaag cgcgtccacc gtgtcatact gatgcgcacg cactttcatc agataagctc
     2701 cactgtgcag tgcggcgcgt cctgcacccg gctgatggcc cagcgggcgt cacgccacaa
     2761 atcaccgctt gcttccgcca gttcttcgcc ccgcttcgca ccggatgccg tggcgtcata
     2821 gtcctggaaa cgttcgttga gcatggcgcg agcccagcag taaaccgcgt tgaaatagtg
     2881 ctgaatgcgc tcacttttcc cgtccagctg ttccgccgga acctcagcca gcgacgcata
     2941 ccccagcatc tgctggcgtc tgcgaaactc atacagctct gcgttaacct ccgaaattgc
     3001 cgacagtgca acctgcttta aacgcggctg cgtcaccgtg ccgtcagtgc gcatgacact
     3061 gcgaaactcc gacaggtcca catcaggcca gaacggcgta tttctaatga tttccgcctg
     3121 ttccggtgcc tgttctggcg caacaaactt catgctgctt tctcctgaaa taaagggcgg
     3181 tggacggggt tttgatgtgg ctgtgccttt cgccaccccg tgccgcccgt gcgcgggggc
     3241 acgttctgtc agcggctgtc attgcgcagt ctgcgctcca gctgctgttt gtcttttttc
     3301 acgccacagc ggggatcgag ctgtaacgca tggttgagat gattaagggc ggaagccgga
     3361 ttgctttcac tcaggaccgc gccaatcgct ttatgcagac gtgcccgtga ctggtccggc
     3421 atatccagac cgtctgtcag ctccagcgtc tgcagcaaca gatcggcatc aaagccggtg
     3481 gcggcaagca ttgcgctctg cgctgcatct gccatttcct ctgtcagcac ggtctgcacg
     3541 ttgcggttgc ccagcggcat cacccatcca tgacgcaggg catgacgccc gatctccagc
     3601 gccccggcat aatctccggc atcaatgcgc cacaacatca cgtacatcag cacgtcatcc
     3661 tgttgagcgc ctccggcagc caggacaccc tccgcccagg cggcgtactt cggcagcagc
     3721 tccactttga tttccgcttt tttgaccgtg gactgaacgc ccttgagacg gcggcggtct
     3781 tccgccagtt gcagcagcat caggtcatag cccgatgcgt ggcgaacact gccaccctca
     3841 cggacggcct gttcagcctg aacgcgcagg cgatgctgcc gtgcgggact caggctcatg
     3901 gattacgctc cggtttcggc tgcggcggcg ctgaaatcac taatctggat gttttccacc
     3961 agtgcggcgc agcggtagtc ctcaaccaca taggcttcgt taacggattc aaagttttca
     4021 atccggtcac gtttcgggtt gtcgataact gaacggcggc gggtgtcttc ctgccagtag
     4081 atggacaggt tatccagacg ggtgatcagc agcgcattcg gcgggaagaa cggcgcacgc
     4141 acggcctgca ggccacccat gcgtttctga ctgatgatca tatcggcagc cagtttttca
     4201 ctgttttcct gctctttgtt gaccagcggg aaatacttgt cagacagcag ttcacgaccg
     4261 caaatcacca ccagatcgtc atcgtcctgg tagaccacgt cgataagctc attgacggca
     4321 tccatcacca cggcgtccag gttggcatat tcgccacctt tcccgacttt cactgcgccc
     4381 ggtgtggttt caccgcccgt ggtggtgctg cccatgacgt gatccggtgc atcctcacgg
     4441 attttctgca gccagccttt attcacatcc tgcagcagcg ggttttcgct acggttggag
     4501 gttttcgcac gcttcacgcc attaaagccg atcatgatgc ggtccagtgc ctgacgtttc
     4561 acgatggcgt cacggatacg cacctgaaaa tcctgaaact tcgcccacag gtccagcttc
     4621 gcgtaggtca gcaccgtgtc aaagttggtc tgctcgcatt tatattccac atcgaccatc
     4681 agcgtcggat cgacaggttc acgctctttc gcagtggtat cagtggttcc ggcaatggtg
     4741 ctgccaactc ccaaccccag cagctgaccg gactgctcag tcactggcgt gacgttaatc
     4801 agagtcagga aagcggcgga ctgctggatc tggtcttcca gcgtctgctg cacggacggc
     4861 tctacggtga acttgctgga cagttcttca actgccacac cgttcagacg cgccagttgc
     4921 tgcaggtaag cgttaaaagc aaagcgggta ttcttcttca tcaggttttg tgctccatca
     4981 gcaattggtc agagtgtcag cgggggcgtt accgcctgtt gcacgctggc ggtagtcctg
     5041 gcggctgtct tcatgactca gcttgtccac cagttcgtta aaggcggttt gctgtgcctg
     5101 cagggcagtc tccagctcag acaggcgttc ttcctgctca gacagggatt tttcggtgcg
     5161 tgcgctcagg ttctgctgct cagtggcgac cagctccacg gccttatgca catcagagaa
     5221 ccgggcgtca tcggactgct cttttttggt aaacagcgcc gtgacgcggg caaacaggga
     5281 cggtttgtcg tcctggactt cttccagttc gatcaccgtt tcctctgcgg cggtaaagag
     5341 attggcggga ttctgcttgc ggtttgccag cgggttatgg gctgcactgg cgctgaatgt
     5401 cagcatttca gtgcccagac tggcagggtc atcagtagca gccaggccga ctaggtaggc
     5461 tttgcccgta tcagcgaact tcgggctgac ttccataaag gtgaataatt tctggccttt
     5521 tttcaccagt tccaccaggg actccgttgg ctcaacgtca gcatacagcg ccatcttgcc
     5581 tgccagcgga ccttccgtga tttcttcagc aaacagcgcc gtcaccttgc cgtagcggtt
     5641 aaaggtgctg tccggcagat aagacttgat gtgctcaagg ttaatcagcg cggtatacac
     5701 cgccgggtta tagctggctg ccatctgttc cagccattca cgctggattt cgcgtccgtc
     5761 ggtggtggca ccttccaccc cgatgcgaaa acgctttgct ttcactgtca tgagccgtgc
     5821 tccgttagaa aaaacttact ggagccttat ggttgcggtg ataggggcag tgaaacaatg
     5881 cgcggtattt gtaccgacaa ccacacaaac cgcaggcggg gaaagccttc attcaaggct
     5941 gtaggtttgt gccatgaaca ccacactgac acccgcagat ctcgatcccc gtcggcaggc
     6001 catgctgctg tactttcagg gataccgcgt agcccgcatt gctgaaatgc tgggcgagaa
     6061 agttgcaacc gttcacagct ggaaaaaacg cgacaagtgg ggtgactatg ggcctctgga
     6121 tcagatgcag ctcaccaccg ccgcacgcta ctgccagctc atcatgaagg agcacaaaga
     6181 agggaaagat ttcaaagaga ttgacctgct ggcgcgccag tctgagcgcc acgcgcggat
     6241 cggcaagttt aacaatggcg gcaacgaagc cgacttaaac cctaacgtcg ccaaccgcaa
     6301 caaaggccca cgccgtcagc ctgaaaagaa tgttttcacc gatgaccaga ttgagaagct
     6361 ggaaaaaatt ttccattcct ccatgttcaa ctaccagcgc cactggtggg aagccggaaa
     6421 aaccaaccgc atccgcaacc tgctgaagtc acgccagatc ggcgcgacct tctattttgc
     6481 ccgtgaagcc ctgattgacg ccctgcttac cggacgtaac cagattttcc tttctgccag
     6541 taaggcacag gcccacgtct tcaaacagta catcatcgac tttgccaaag aagtggaggt
     6601 ggagctgaaa ggcgatccga tggtgcttcc caacggggcc acactgtatt tcctcggcac
     6661 caatgcccgc actgcccaga gttatcacgg taacctgtat ctggatgaat atttctggat
     6721 accgaaattt caggagctac gcaaagtggc ttccggtatg gctattcaca agaaatggcg
     6781 gcagacctat ttttccacac catccagtct gacccacagt gcttatccgt tctggtccgg
     6841 tgcgctgttc aaccgtgggc gcaacaaagc tgacaaggtg gacatcgacc tgtcccacag
     6901 caatctggcc cccggccggc tgtgcgcaga cgggcaatac cgccagatag tcaccgtgga
     6961 agatgcggtg cgcggcgcct gtaacctgtt cgaccttgac cagttgcgca tggagtacag
     7021 ccctgacgaa taccagaacc tgctgatgtg cgagttcgtg gacgatctcg cgtccgtgtt
     7081 cccgctcagc gaattgcagg cgtgcatggt ggacagctgg gaagtctgga ccgactttca
     7141 tgcactggcc ctgcgcccgt ttggctggcg cgaagtgtgg atcggttatg acccggcaaa
     7201 aggtacgcag aacggcgaca gcgccggatg cgtggtggtg gcaccgccag ccgtgccagg
     7261 cggtaagttc cgcattcttg agcgtcacca gtggcgcgga atggactttc gcgcccaggc
     7321 tgacgccatc aaaaaactga ctgaacagta caacgtgacc tatatcggca tcgactcaac
     7381 cggcgttggt cacggggttt acgagaacgt gaaagcgttt tttcctgccg tccgggagtt
     7441 tgtctacaac cccaacgtta aaaacgccct ggtactcaag gcctacgaca ttatcagcca
     7501 ccgccgtctt gagtttgacg ccgggcacac cgacattgcg cagtcattca tggcaatccg
     7561 tcgcgccacc accgccagcg gcaaccgccc gacctatgaa gccagccgca gcgaagaagc
     7621 cagccatgcc gatctggcct gggcaacaat gcacgcactg tttaacgaac cgctgcaggg
     7681 cgagtccgcc aataccagca atattgtgga gattttttga tgggaaagag taagaagaac
     7741 cgcgctgcgg cgacgaaaca gacccagcat aaaaaccaga cttcagccga agcattcagc
     7801 ttcggcgatc ccgttccggt tctggaccgc cgtgaactac tggactatgt ggaatgcgta
     7861 cagacagatc gctggtatga gccgccagtg agttttgacg gactggcgcg caccttccgc
     7921 gccgccgtgc atcacagttc accaattgcg gtgaaatgca acattctgat cagtacctac
     7981 atccctcacc cgctgctcag ccagcaggct ttttcacgtt ttgtgcagga ttatctggta
     8041 tttggtaacg cttacctgga gaaacgcaca aaccggttcg gagaggtcat cgctcttgag
     8101 cctgctctgg caaaatacac ccgacgcgga ttagacctgg atacctactg gtttgtgcaa
     8161 tacggcatga ccacgcagcc gtatcagttc acgaaaggaa gcatctttca tctgatggaa
     8221 ccggacatca accaagagat ctacggcctg ccaggttacc tttctgccat tccgtcagcc
     8281 ctgctcaacg agtccgccac gctgttccgc cgatagtatt acattaacgg cagtcatgca
     8341 ggcttcatca tgtacatgac cgatgccgcg caaaaccagg aggatgtgaa caacctccgc
     8401 aatgcgatga aaagcgccaa aggaccaggt aacttccgca atctgtttat gtactcgcct
     8461 aacggcaaaa aggacgggct tcagatcatc ccgttgtcag aagtcgcggc gaaggatgag
     8521 tttctgaaca tcaagaacgt gagccgggat gacatgatgg cggcgcatcg tgtgccaccg
     8581 caaatgatgg ggattatgcc taataatgtc ggggggtttg gggatgtgga gaaggcgagc
     8641 ctggagtttg tacgtaacga gttaataccg ttacaaaaaa gaatgatgga aataaataaa
     8701 ttggtaagtg agaacattgt taaatttgat agttataaac tagctactta acgtaatcac
     8761 taaatgaggt tctttaacac agctaaaaaa tttattaata gccagcagtt tttatgaatt
     8821 tcttcagcgt gcagatacac gctgaagatg caaaaaatca tatgagacga ccgtctggac
     8881 ttctgttacc taaatgtaat tcacagagta tccacctaat cacatcaggt cgaattaacc
     8941 cagctacaaa aaccgaattc caattatttt tacctttatg tttttcatcc aacagcaaca
     9001 actcgcgagt caacaactca tatacatcgc tataagtaga aagactctta ttcagtcctc
     9061 taataacaag ctcaggatat aagtaaaacg actcccattg ttcagacaaa taccccttaa
     9121 tattattctt gataacaaca ttatcaagat gatacttaac attgttatat tctggtgaca
     9181 ttgggtcaat tatgattttt acatcaattg taggtgttcg ccctaattta gaaaaattag
     9241 cacatattaa tctttgtttt aatatattat caaaatatgg atgcagcatc cgatggcctg
     9301 cagaattagc tatagtagta cttttgaaag tattacattt gcaagcagga accaaattct
     9361 tagtgaataa agaaaattct ggatagtttt ccttgggtaa aacatgatcc aaagtcccgc
     9421 tatgcattga accacacatt ggacatagag agttagaatt agctgctctt atatcatcaa
     9481 ttatagataa acactttgcg ggattgttat aataatatct caaagcttca gcaatattgt
     9541 tactcaatac gccacaagaa ttgacattaa gatacccttt attctttatg tacgatctat
     9601 atgcattaag tataaatgta tcctgtccat tcagaacaga atgatgtttt aatctcttat
     9661 ttgcagatag ttttttaaat gcagaataat ctttaaaaac aggtcttttt aatttattca
     9721 tttcaattgc ccatttcatt tctcaacgca gttaatacat taagtgataa gtcctcgcta
     9781 tatttagatt caacatcatc ccaagacata ttctttgcaa ttatattgtt ttttacttta
     9841 tttaaaattt gagttggttc actctcaccg aaaacaaaat atgagatatt tcctatattc
     9901 gccccaaaag tactcaatct cggtttttcg ctaacaatta ccccatcatc tcgtcttctg
     9961 agtattgtca cttgctcctt aaaaacctcc cgaacaagat aaaccgaatg cgttgctatg
    10021 atagctgaag agcctgtctt ttctaataaa ttatcaagca atgccataaa tttattaata
    10081 aatgaaggat ggagatgtgt ttctggctca tctattaata gaagagtccc attctcaata
    10141 tacaaacaga cttgtacaca aaacttaata aacgatattt ccccactact caaagggtaa
    10201 catttatttt caataagcct caaaggctcg ccagagagaa taatttcaga atataatgat
    10261 agtctagatt cttcgcctcg agaattaagc tcatttaatt taacaaatgg tgaattttca
    10321 ccgccacatt tgattactaa atcgttgtta ctatttagaa cactcagtgc atcaacaaat
    10381 atattccacc tttgattata gccgatagcg tcgttactcc tcgctagttg cactattaaa
    10441 tcattcaagt ttaatttgga ttttgattca cgatttaaag tcaatctttt gtaccatatc
    10501 aatgatttta ttcttttatc ggttggaaat gaacacttac tttcatttgt tggagaaaaa
    10561 gcaatgagcc tactaatttg aattcgttct tcaatgctca caccgttaga atcaactaca
    10621 gccaccaaat tatcctttcc tttaatcgca gccaatgcga tttctctaag cgtttggctt
    10681 tttcctacac cattctcgcc tataattatg gaaattcttt ttggtaaatc atgctcgtga
    10741 tcaaaattaa aaacataaga tacatcttct tcattaactt tattcgaata gctaatcttg
    10801 atgtgctgtg ataaattacc caactcctca tattgaatac cggaaagaac tgttcctgca
    10861 tttttgaaag taaaatacga ctcagactct ctaatgaaag atttattaaa gatatcagaa
    10921 gagattgctt ttttcctcaa attctctgca ctagcgtcac ttttcttaga aacaacatca
    10981 ttaatgaaat ttaatatata tttggattca ttcaccccaa aaaatcttac tagtcttcga
    11041 taattattca tatcctgaag catgacaaaa taatcattaa acccctcatc ctttaaatta
    11101 gattcttcct ttttcttcac tcgccttatc agttctgctt ttccatttcg ttcctcctct
    11161 gaattcaaaa aaccaatata accattcagt gaaattatat ccttacactc ttttttatta
    11221 aaaatagata tttcgactct actcaaatat ccaaaatcat tccaatcgct tcttgatggg
    11281 actattttta tataattacc agaatcagat atctgttgat tatttgtaat taaaaaatat
    11341 aaactataat ttttattttt cttgactaac attattaccc tctcacttca ttagtgatga
    11401 tttattttgg aattatttta cacacttata cctagcgcgc aatcgtatcc ccgccacgcc
    11461 tgcccgcttt atgtagaggt tttcatgcac ctgcatgatc tacgcaaaag cccgccagtt
    11521 ctggcgggcc ttagcaaaaa cgatcctcaa acgatcatgc gatctcatgc ggcatagaca
    11581 tgcactacag agctaacgcc tcgcaagggc tcgttgttca accttgctga cgccagaagc
    11641 tagttcagac gccagcaacg tttcttaatg cagccagctg tcgtcttccc acaccttctg
    11701 cataattttc atcacttgtt ttctttcttc gtccagttgc aatccagtaa gttccacacc
    11761 gttagagcta cctttgcgga tacgaattac cgttttggga tacagagggc gcagattgcg
    11821 gtaaagctcg gattcaagag cgtccagggt agactggcta atcttctgct ctttatcgat
    11881 cattatttca atgcgcataa aagtcacctc agctgatgac atccattgag cggttgtatt
    11941 cgtgggttct gatttttgcc atgagttcat cagtcaattc agaaacccac tgcagagcca
    12001 gccccttctc ttcatcacta cactcactag ccgctacaag cttaagaaaa aaatcaatgc
    12061 gctggagctt caaagactcc aaaaaatagt cctgcatctt tcctcctatg acaccacacg
    12121 caatactgta tgcataacca ctgtttatat ttacagtata taataatctt actgatgtaa
    12181 aacgtttttt tacgttcatc agcctgatat gcctggtatt attaagagca cgaattgtta
    12241 acccgcgtaa ttaatacagg ttccgccact gatcatcttc ctgcaaacgc tggttccgat
    12301 agaagatacg caggcctgct cctgacggaa tactgcctcc gcgaaggagt aaatcgacct
    12361 ctttctcgct gccatcaaat cctctggact tcagctcata cacgagctgc agtcgctgat
    12421 ggtctgtaat tcgctgtttg tagtctttac gccgtttcgg tttcaccagg cgtaaccttg
    12481 ctgccagttc ccggcgctct tttttgctca tactgtgcag gtaatcgtgc aactccttgt
    12541 catccatgct ggtaatgtcc gttctggggt tcccatcagc tgatttatct ttctcctgtt
    12601 ggttcaaatt ttcagcaagg agacagttat tgccacgagt ccaaggggcg caagcgccct
    12661 ggtcggctgc cgcctcctga acgtcaacgg ctttacgaac cattttccac ttcactgcat
    12721 gagtgcagat cttgccttct gcaatgggtg accagatgcc ataaatacga ataccgtgat
    12781 cgccataggc ggtcggctct tcattgattt cataagcggt tctgatcaag tgatatttgc
    12841 gaggaaccag cacgccgccc tgcctcataa tgtaggtggc aaaacagcca gcatcagcag
    12901 cagccaggat ggcatcaagg cgcgggttat ccagtaccgg cgcacctgct tttttgtcac
    12961 cctgctgcct tgccgcctga ccagccaaca accgcagttc acggtaagcc tgacgccctg
    13021 gaataccaaa gaagcggaat tgctgaacac gatgcagaga cgcccaggga ttaacgtatt
    13081 cagcgttatc acgcagggat ttacccgttt ccttgctgat ctcgccagcc agaccacgcc
    13141 cgtcaatgtt cttactgatg tatttcgcga tgtagcttgt cggcgttcct ttgcgcgggt
    13201 ttatcagctc agatttaaag cgtggaccag tgttattacc cagttcctcg cggtcttcac
    13261 ggatggcaaa cttacgcaac aatgcagtaa tggcgcggcg gtcttttttg cgcataaaac
    13321 acaacaggtg ccagtgaact gtaccgtcat gatgcggctc agccacccgc acgccatacc
    13381 agcgcaaccc ggctttgtgc atcgccttac gaaatgcagc aaacatgccg accagataat
    13441 cgctgctttg tcttaccgtc gcatttgtcc aggttgggtt tggtctgccg ttattgagcg
    13501 tggaatggaa acgtgacgga caggtaatgg tgtagaaaac ggcgcagtca ccgcgcattt
    13561 ccgcgataag ctccagacct ttaacacagg ccatcatctc attgcggcgg tgcgccgggt
    13621 tgctgctgct ggcgtttacc acgtcttcca tatccagcgt gtcgccctct tcgttcacca
    13681 gttcatgaga acggaaaaac tccaatgact tgcggcgctg ctcacgttta tgcatcacgg
    13741 cttcatagct gacataggga gatgcttttt tgctgaccag gcagacagca cgcaactgct
    13801 cttcccgcca ttcgcaacgc attttccata atttccggta ccaccagtcg gcgcacaaca
    13861 tacgcgccag cgaacccgga atgagttcat agggcacggg tttacggcgg tttcttttcc
    13921 gacggagttg ctcaaacgca ggcgggatga catccagacg cagggtttcc gctgccacct
    13981 tttcccatgt cttgcggatt tcttctggct taacgtcatc ggtggcatac aaatcaccac
    14041 aagctgcatc aaggcacatg ctcatatgcg cagcgacaag ggtagacagg cgtttcacct
    14101 gatcctgact catttcaggc agaatcagca ggccgtccag ccctacatgg cttgccataa
    14161 aacgaaaaga tgcagatagc tggctgtcgc gtacatgctc cagtcgttcc agacatggct
    14221 taatcgtctc acgtaaatag cgggaataag cctttggcct gcccaggctg ctgaagtatt
    14281 caatacgttg catcagcggc ttgctgatat gggaaggctg ggcgttgacg tccgccagaa
    14341 tgaccatatc cggattaaaa cgctgctgct catgcgccag ctttgcccgg ctaatgagct
    14401 tatcctgctc catttcgtgc tggacaggat cacgtgattc ataaaaaaaa taacgctccc
    14461 agacctgatc actcagtgcc tcgcggcgca actgttcctg ctcgttatcg gcagcgtaca
    14521 gagtgatcag gtttgaaagc gcagaaaccg gcgcaacttc cgccgggtcc agataagggt
    14581 taatggcctt tttcgggctg ttccatgaga acgctgcggc agcctcgtta aagccgcagc
    14641 agttgttcat atcggcatgg ctcatgcacg tactccgtac acggcagaac tatccacgcc
    14701 acgcgaataa tcaaatccca cccagcagcg cggcccggaa acagcaatga tttctgttgc
    14761 tgatttaccc tcgccagctg ccacaccgat gctgcgtttt accttgatat agtggtgagt
    14821 aaaattgcga tacagcgaac ggatcaggga tgtgtcactg ttagaaacaa tgaccggatg
    14881 tccttctgat gaccgatgtt caagaacgga tgctaggtga tactggtcat cttcagtgaa
    14941 accatcagtg tgatagccgg aaaacgtacc gtcatacggt ggatcgcaat acaccacatc
    15001 ccccgccttc aacatcgcca gcgtttcatc aaagctggcg cagataaacg ttgctcgctg
    15061 ggctttttct gcaaatgcgc gaatttcttt ttcagggaaa tacggatttt tataattgcc
    15121 gtagggaatg ttgaaatgcc cgctcttgtt atagcgacat aaaccacggt aaccgtgacg
    15181 attgagatac aggaaatata ccgctttcat gaaatcagta atttcagttg agtaattaaa
    15241 ctcctgcctt atgttgtaat aagccacctc cctgtttgcg atctcaaata aaactctgg
//
LOCUS       DAJVUK010000100        15112 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.100, whole genome shotgun sequence.
ACCESSION   DAJVUK010000100 DAJVUK010000000
VERSION     DAJVUK010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15112
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.100"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..413
                     /locus_tag="OQQ57_002807"
     CDS             <1..413
                     /locus_tag="OQQ57_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1957503.1"
                     /translation="NSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEF
                     GGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIG
                     YAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR"
     gene            429..911
                     /locus_tag="OQQ57_002808"
     CDS             429..911
                     /locus_tag="OQQ57_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HCS1957504.1"
                     /translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
                     DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
                     GLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
                     "
     gene            complement(988..1335)
                     /gene="rplS"
                     /locus_tag="OQQ57_002809"
     CDS             complement(988..1335)
                     /gene="rplS"
                     /locus_tag="OQQ57_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HCS1957505.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(1377..2144)
                     /gene="trmD"
                     /locus_tag="OQQ57_002810"
     CDS             complement(1377..2144)
                     /gene="trmD"
                     /locus_tag="OQQ57_002810"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HCS1957506.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            complement(2175..2723)
                     /gene="rimM"
                     /locus_tag="OQQ57_002811"
     CDS             complement(2175..2723)
                     /gene="rimM"
                     /locus_tag="OQQ57_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HCS1957507.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(2742..2990)
                     /gene="rpsP"
                     /locus_tag="OQQ57_002812"
     CDS             complement(2742..2990)
                     /gene="rpsP"
                     /locus_tag="OQQ57_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000256453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HCS1957508.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(3127..4488)
                     /gene="ffh"
                     /locus_tag="OQQ57_002813"
     CDS             complement(3127..4488)
                     /gene="ffh"
                     /locus_tag="OQQ57_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HCS1957509.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            4655..5446
                     /locus_tag="OQQ57_002814"
     CDS             4655..5446
                     /locus_tag="OQQ57_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HCS1957510.1"
                     /translation="MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVC
                     HAIALEARILPDGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALI
                     NLALATFMPNEYITHLEATPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
                     AFNQEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWF
                     VYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLAYFGSRIVQQLIS"
     gene            5467..6753
                     /locus_tag="OQQ57_002815"
     CDS             5467..6753
                     /locus_tag="OQQ57_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCS1957511.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(6808..7401)
                     /gene="grpE"
                     /locus_tag="OQQ57_002816"
     CDS             complement(6808..7401)
                     /gene="grpE"
                     /locus_tag="OQQ57_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HCS1957512.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            7524..8402
                     /gene="nadK"
                     /locus_tag="OQQ57_002817"
     CDS             7524..8402
                     /gene="nadK"
                     /locus_tag="OQQ57_002817"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HCS1957513.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCKKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            8488..10149
                     /gene="recN"
                     /locus_tag="OQQ57_002818"
     CDS             8488..10149
                     /gene="recN"
                     /locus_tag="OQQ57_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HCS1957514.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMAYGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALATQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            10298..10639
                     /gene="bamE"
                     /locus_tag="OQQ57_002819"
     CDS             10298..10639
                     /gene="bamE"
                     /locus_tag="OQQ57_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HCS1957515.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
                     NIDNKPALSGN"
     gene            complement(10701..10991)
                     /locus_tag="OQQ57_002820"
     CDS             complement(10701..10991)
                     /locus_tag="OQQ57_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HCS1957516.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(10981..11418)
                     /gene="ratA"
                     /locus_tag="OQQ57_002821"
     CDS             complement(10981..11418)
                     /gene="ratA"
                     /locus_tag="OQQ57_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010376629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HCS1957517.1"
                     /translation="MPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTP
                     GQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRI
                     EFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            11589..12071
                     /gene="smpB"
                     /locus_tag="OQQ57_002822"
     CDS             11589..12071
                     /gene="smpB"
                     /locus_tag="OQQ57_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HCS1957518.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            12286..12648
                     /gene="ssrA"
                     /locus_tag="OQQ57_002823"
     tmRNA           12286..12648
                     /gene="ssrA"
                     /locus_tag="OQQ57_002823"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(12809..15112)
                     /locus_tag="OQQ57_002824"
                     /pseudo
     CDS             complement(12809..15112)
                     /locus_tag="OQQ57_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
BASE COUNT         3707 a         4061 c         3541 g         3803 t
ORIGIN      
        1 acaattccga tgcccgaaaa acgtcggcgt tactatttct tgatggcgat aatttcaaat
       61 atatcaatga tacctggggt catgcgacgg gcgatagggt cttgattgaa atcgcaaaac
      121 ggttagctga atttggcggg ctgcgacata aagcataccg cctgggcggc gatgaattcg
      181 ctatggtgct ctatgatgta cagtcggaat ctgaagtgca acagatatgc tcagcactga
      241 cacaaatctt taatctcccg tttgatcttc ataatggcca tcagaccacc atgacattaa
      301 gcattggtta cgcgatgacc attgagcacg cctctgcgga aaaattacaa gagcttgccg
      361 atcacaatat gtatcaggcc aaacaccagc gtgccgaaaa gctggtgaga taacaaggat
      421 atatcgatat gataaagcac ctggtagccc ccctgatttt cacctcacta atactgactg
      481 gctgccagtc ccctcaggga aagtttactc ctgagcaagt cgccgctatg caatcttatg
      541 gatttactga atccgccggc gactggtcgc tgggcttatc agatgccatt ctgttcgcaa
      601 aaaatgacta caaattgctc ccggaaagcc agcaacagat ccaaaccatg gcagccaaat
      661 tggcctcgac agggctaaca catgcccgta tggatggaca caccgataac tatggtgaag
      721 acagttacaa cgaaggctta tcattgaaac gggcgaatgt cgtggccgat gcatgggcta
      781 ttggtggaca aattccacgc agcaatctca ccacacaggg tttaggaaaa aaatatccca
      841 tagccagtaa caagaccgcc cagggccgcg ccgagaaccg ccgcgtcgca gtggtgatta
      901 caacccctta aaacacgagc aaacagacaa aaaaagggcc agccaattgg ccagcccttc
      961 ttaacaggat gtcgcttaag cgaaatctta gttaagacgc tctttgatac gagcagcctt
     1021 accagtacgc tcacgcaggt agtacagttt agctttacga acagcaccac gacgtttgac
     1081 agaaatgctg tcaactaccg gagagtgagt ctggaagaca cgctcaacgc cttcgccgtt
     1141 ggaaatttta cgaacagtga atgcagagtg cagaccgcgg ttacgaatag cgataaccac
     1201 gccctcgaat gcctgcagac gttttttgga accttcaaca acccatactt tcacttccac
     1261 ggtatcaccc ggacggaagg aaggtacgtc ctgcttcatc tgctcttgtt caagttgctt
     1321 aataatgttg ctcataattt aatctcttat cctgggtaaa ctgatatctc gggggcttac
     1381 gccatcccat catgtttatg ttgctgttgt gcgtgttccg ttttgaactc cgccagcaac
     1441 cttgcttgct cttcagtcag agccaggttt tccagaagtt caggtcttct aagccaggta
     1501 cggcccagcg actgtttcaa acgccagcga cgtatctcgg catggttgcc cgacagtaac
     1561 actggcggaa cttccatccc ttctaacacc tcaggccgcg tatagtgcgg gcaatccagc
     1621 aatccttcag caaaggaatc ttccgttgcc gaggcttcat gtcccagtac ccccggaata
     1681 aaccgggaaa cggagtcaat cagcgtcatt gctggtaact caccaccact gagaacgtaa
     1741 tcgccgattg accattcttc gtcaatttcg gtttggatca cgcgctcatc tataccttcg
     1801 tagcgaccgc acaccagaat caatttttga ttcgttgcca attcgctgac gcccgcttga
     1861 tcaagcttgc gtccctgtgg tgacagataa atcacctttg cgccttcacc cgccgcggct
     1921 tttgctgcat gaatggcgtc ccgcaagggt tgcaccatca ttaacatccc cggtccgccg
     1981 ccgtaaggac gatcgtccac ggtacggtgc cggtcatgcg tgaagtcgcg aggactccag
     2041 ctctggatgc tcagcaggcc atttttaact gcccggccag ttaccccgta atcggtaatt
     2101 gcgcggaaca tttcaggaaa caggctaatt atgccaatcc acatagcgcc gtcttttacc
     2161 gtttatccgg tggtttaaaa accaggatcc caatctactt cgattgaacg agtagtgaga
     2221 tcgactttct tgataacctg cccatcgagg aacggtacga gacgttcctt gataccaaac
     2281 gcatctttca ggtttgcctt aatgacgaga acgtcattag atccggtttc catcatatcg
     2341 acgactttac cgagatcgta gccttcagtg gttactacct ggcagcccat caggtctttc
     2401 cagtagtagt caccctcttc aagctgaggc aactgcgatg aatccacgac aatttcacaa
     2461 ttcgtcagca ggttcgccgc atcacgatcg tcaacgcctt tcagcttgat gatcatgtcc
     2521 tgattgtggt gcttccagct ttccagctgg acttgctgcc actgacccgc cttctggata
     2581 aaccagggct gatagtcaaa aatgctttcg gcgtcttcgg tggaagaaaa cactctgagc
     2641 cacccacgaa taccgtaaga cgaacccatt tttcccaaaa cgatgggatc aacaggtgct
     2701 tgcgcggtga gttgtttgct catcatgacc accgtgacag attaagctgc tttgtttact
     2761 tctttgatca gcgcagcaac gcgatcagaa atagttgcgc cctggccaac ccagtgagcg
     2821 atgcgatcca gatccaggcg agtgccttct tctttttcgc tagcgattgg gttgaagaaa
     2881 ccaacgcgct cgatgaagcg accgttgcgt gcattacggc tgtcagcgac aacaacctgg
     2941 tagaacggac gctttttagc gccgtgacgt gctaaacgaa tagttaccat aacatcctct
     3001 tgtgtgaata aaacaaccgg accccatcga ggaacggagt ccggtgtcat attaaaagcc
     3061 cgaaaatttt actgatttct ggagaaaatg caatcagcag ttaataactc tgtcgcataa
     3121 ggtcatttag cgaccaggaa atcccggcgg catcatcccc ttcatgcttc tcatcatctt
     3181 cgccattccg cccttcttca ttttcttcat catgcgctgc atgtcgtcga actgtttcag
     3241 aagacggtta acgtcctgca cctgcatacc gcaaccggca gcaatacggc gtttacgcga
     3301 acctttgatg atttctggct tagcgcgctc tttcatcgtc atcgagttga tgatggcttc
     3361 catacgcacc agcactttat cgtccatctg tgacttgacg ttatccggga tctgccccat
     3421 gcccggcagc ttgcccatca ggctggccat gccgcccata tttttcatct ggcgcagctg
     3481 ctcaagaaag tcgttgagat cgaagccgtc accttttttc agcttgctgg ctaatttctc
     3541 tgcctgcgcg cggtcaactt tgctttcgat atcttcgatc agcgacagta cgtcgcccat
     3601 gccgagaata cgcgacgcga tgcggtccgg atggaacggc tccagcgcct cagttttctc
     3661 gccaacaccg aggaacttga tcggtttgcc agtgatgtga cgaatagaga gcgccgcacc
     3721 gccgcgggca tcgccgtcca ctttggtcaa cactacgccg gtaagcggta acgcttcatt
     3781 gaatgctttt gccgtattgg ccgcatcctg accggtcatg gcgtcaacca caaacagggt
     3841 ttcaaccggg ttaatcgacg catggacttg tttgatctcg tccatcatcg cttcgtcaac
     3901 gtgcagacga ccagcggtat ccaccagcag cacgtcgtag aatttcagtt tggcttcttt
     3961 cagcgccgcg ttaacgatat ctaccggctt ctgaccaaca tcagaaggga agaaatcaac
     4021 gcccacctgc tctgccagcg tctcaagctg tttgattgcc gccgggcgat aaacgtcggc
     4081 agaaaccacc agcactttct tcttgtgctt ctcgcgcagg aacttaccga gtttaccaac
     4141 gctggttgtt ttaccggcac cttgcaggcc cgccatcagc acgaccgcag gcggttgcgc
     4201 cgccaggttc agggtctggt tctcttcgcc catcgccgca accagttcgt tacggacgat
     4261 tttgacgaac tcctgccccg gcgtcaggct cttattaact tcatgaccaa ccgctttctc
     4321 ttttacgcga ttgataaact cacgcactac cggcagagcg acatccgcct ccagcagcgc
     4381 catgcgcact tcgcgcagcg tatcttttac gttgtcttca gttaggcgtc cacggccact
     4441 gatattgcgc agcgtgcgcg acaaacgatc ggttaaatta tcaaacattg tctctcgcct
     4501 ggggtggaaa cggttggccg caatcgcgac acatcatcag tattttgccg cagtataaca
     4561 tgaaggcgtc tttgttgtta tgcaacggtt ggagcagcgt tcacctgacg ctatactgct
     4621 tctctttctt attgctcaaa ctgttgacat cactatgccc gtttttgctc tgctcgcgct
     4681 tgtcgcctac tccgtcagtc ttgcgctgat tgttcccggt ctgctgcaaa aaaacggcgg
     4741 ctggcggcgc atggctatta tttctgcggt cattgcgctg gtctgccacg caatcgctct
     4801 ggaagcccgc atcctgcccg acggtgatag cggacaaaac ctcagcctgc tgaacgttgg
     4861 ttcattggtc agtttgatga tctgtacggt aatgaccatt gtggcttctc gcaatcgtgg
     4921 ctggttgctg ctacccattg tctatgcctt tgcgcttatc aacctggcgc tggcgacctt
     4981 catgcccaat gaatacatca cccatctgga agcaacgcct gggatgctgg tgcacattgg
     5041 cttatcgctc ttttcctatg ccacgctaat tatcgccgcc ctgtacgcgc tgcaactggc
     5101 gtggattgat taccaactga agaacaagaa gctggcattt aaccaggaaa tgccgccatt
     5161 gatgagtatc gagcgtaaaa tgttccacat cacgcagatt ggcgtggtgc tgctaacgct
     5221 cacgctttgc actggcctgt tctacatgca caacctattt agcatggaaa atatcgacaa
     5281 ggctgtgctc tctatcgtgg cgtggtttgt ctatattgtg ctgctgtggg gacattacca
     5341 tgaaggatgg cgtggacgcc gcgtcgtctg gtttaacgtt gcgggcgcgg taattctgac
     5401 actggcctac ttcggcagcc gaattgtcca gcagttaatc agctaaaccc agaaaaggag
     5461 tttcccctgg aacacatttc tactactacg ttgatcatta ttctgatcat catggtggtc
     5521 atttcagcct atttttccgg gtccgaaacc ggaatgatga ccctcaaccg ctatcgtctg
     5581 cgacatatgg cgaaacaggg taatcgctcg gccaaacgcg tcgaaaaatt gctgcgtaag
     5641 ccagaccgcc tgataagcct ggtgttaatc ggcaataacc tggtcaatat tcttgcctcc
     5701 gcgctcggca ctattgttgg gatgcgtttg tacggcgatg cgggcgtggc aattgcgact
     5761 ggtgtgctga cttttgtcgt actggtattt gctgaggtat tgccgaaaac cattgccgcg
     5821 ctgtacccgg aaaaagtcgc ttatccgagt agttttctgc tggctccgct gcaaattttg
     5881 atgatgccgc tggtctggtt gctgaatgct atcacccgta tgctgatgcg catgatgggt
     5941 atcaaaaccg atatcgtggt tagcggctct ttgagcaaag aagagttgcg cactatcgtg
     6001 cacgaatcac gctcacaaat ttcccgtcgc aatcaggata tgctgctgtc ggtgctcgat
     6061 ctggaaaaaa tgaccgttga tgacatcatg gtgccgcgca gtgaaattat cggtattgat
     6121 atcaacgatg actggaaatc gattctgcgc caactctccc actcacctca cggacgcatc
     6181 gtgctctacc gtgattcgct ggacgacgcc atcagtatgc tgcgagtacg tgaagcctgg
     6241 cgattgatgt cggagaaaaa agagttcacc aaagaaacca tgctgcgcgc cgcggacgag
     6301 atctattttg tgccggaagg tacgccgctc agcacgcagt tggtaaagtt tcagcgcaac
     6361 aaaaagaaag tcggcctggt cgtcaacgag tatggagaca ttcaggggct ggtgacggtt
     6421 gaagatattc tggaagagat tgtcggcgat ttcactacgt cgatgtcgcc aacacttgcc
     6481 gaagaggtca cgccgcaaaa cgacggttcg gtgattatcg atggcaccgc caacgtgcgg
     6541 gaaatcaaca aagcctttaa ctggcatcta ccggaagatg atgcccgcac ggttaatggc
     6601 gtcattcttg aggcactgga agagatccct gtcgcaggca cccgcgtgcg tattggcgag
     6661 tacgatatag atattctcga cgtacaggac aatatgatta agcaggtaaa agtttttcct
     6721 gtgaaaccgc tgcgcgagag tgtggcggag taacgaaaac ggccctgcat tcgcatgcag
     6781 ggccgtgaat tattacgaaa acagaaatta cgcttttgct ttcgctacag ttaccatcgc
     6841 cgcacgaatc gtacgaccat tcagcgtata acccttctgc ataatgccca gtacgttacc
     6901 tggcgcaacg tcatcagatt ccaccattgc gatagcctga tgcacattcg ggtccagcgg
     6961 cacgttagtt tcggcgatca cttcaacacc aaacttacgc acaacatcca gcatcgactt
     7021 cagcgtcagc tcaatgcctt caaccatcgc agacatatcc gggttagctt tatcagccac
     7081 ttccagcgca cgatccaggc tatcaatcac cggcagcaat tcgttgatga atttctccag
     7141 cgcaaatttg tgggcttttt caatatccag ttcagtacgt cgacgcaggt tttccatttc
     7201 ggcttttaca cgcaaaatgc cgtcacgttc acgggtctgg gcttcagcca gctgagcttc
     7261 gagattcgca attttttcat cgcgcggatc cacctgctca gcagaagctt ctggctcaac
     7321 tgcctcaatc tcttcgtgct gatccatgat aatttcttcc ggggcttgcc cctcaggcgt
     7381 tttctgttct ttactactca tgaatttctc cgcgtttttt tcgcattcat ctcgctaact
     7441 tcgcttatta tggggatcag tttcagggtt tcaagggaag cactcacatt gtcatcaatc
     7501 ttcgcaacaa ggacctcgga aaaatgaata atcatttcaa gtgtattggc attgtgggac
     7561 acccacggca ccccactgca ctgacaacac atgaaatgct ctaccgctgg ctgtgcaaaa
     7621 aaggttacga ggtcatcgtt gagcaacaaa tcgctcacga actgcaactg aagaatgtga
     7681 aaactggcac gctcgcggag attgggcaac tagctgatct cgcggtagtc gttggtggcg
     7741 acggtaatat gctgggcgcg gcacgcacac tcgcccgtta cgatattaaa gttattggaa
     7801 tcaaccgtgg caacctgggt ttcctgactg accttgaccc cgataacgcc cagcaacagt
     7861 tagccgatgt actggaaggc cactacatca gcgagaaacg ttttttgctg gaagcgcaag
     7921 tctgtcagca agattgccag aaacgcatca gcaccgcgat aaatgaagtg gtgcttcatc
     7981 caggcaaagt ggcacatatg attgagttcg aagtgtatat cgacgagatc tttgcgtttt
     8041 ctcagcgatc tgatggacta attatttcga cgccaacagg ctccaccgcc tattccctct
     8101 ctgcaggcgg tcctattctg accccctctc tggatgcgat taccctggtg cccatgttcc
     8161 cgcatacgtt gtcagcacga ccactggtca taaacagcag cagcacgatc cgtctgcgtt
     8221 tttcgcatcg ccgtaacgac ctggaaatca gttgcgacag ccagatagca ctgccgattc
     8281 aggaaggtga agatgtcctg attcgtcgct gtgattacca tctgaatctg attcatccga
     8341 aagattacag ttatttcaac acattaagca ccaagctcgg ctggtcaaaa aaattattct
     8401 aattttacgc cagcctcttt actgtatata aaaccagttt atactgtacg caataacagt
     8461 aatggttttt catacaggaa aacgactatg ttggcacaac tgaccatcag caactttgct
     8521 atcgttcgtg agcttgagat tgattttcat agcggcatga ccgtaataac tggcgagacc
     8581 ggcgcgggta aatctattgc aatagatgcc ctcggtcttt gtctcggtgg tcgcgctgaa
     8641 gccgacatgg tgcgtaccgg cgctgctcgc gctgacctgt gcgcccgttt ttctctgaaa
     8701 gatacgccag cggctctgcg ctggctggaa gaaaatcagc ttgaagacgg gcatgaatgt
     8761 ttgcttcgtc gcgtaatcag cagcgatggt cgctcccgtg gtttcatcaa cggtacagct
     8821 gttcctctgt cacaactgcg cgaactgggt cagttgctga ttcagatcca tggtcagcac
     8881 gctcatcaat tactcaccaa acctgagcac caaaaattcc tgcttgatgg ctatgccaat
     8941 gaaacctctc tactgcagga aatgaccgca cgttatcagt tgtggcatca aagctgccgt
     9001 gacctcgcgc atcatcaaca gttaagtcag gaacgcgccg cccgtgcgga actgctgcaa
     9061 taccaattaa aagaacttaa cgaatttaat ccgcagcccg gagagtttga acaaatcgac
     9121 gaagagtaca aacgtctggc gaacagcggt caattgctga ccaccagcca gaatgcattg
     9181 gcattaatgg cctacggtga agacgcaaac ctgcaaagtc agctttacac ggctaaacaa
     9241 ctggtgagcg aattgattgg catggacagc aaactgtccg gcgtacttga tatgctggaa
     9301 gaagctacca tccagattgc tgaagccagc gatgaactgc gccactactg cgatcgtctg
     9361 gatctcgatc ccaaccgact atttgaactt gaacagcgca tctcaaaaca gatttcgctg
     9421 gcacgtaaac atcacgtcag ccctgaggca ttgccacagt attaccagtc gctactggaa
     9481 gaacagcagc aactggacga tcaggccgac tcacaagaaa cgcttgcgct ggcggtaacg
     9541 aaacatcatc agcaggcact ggaaatcgcg cgcgcattac accaacaacg ccagcaatat
     9601 gcagaagaac ttgcacagct gatcaccgac agtatgcatg cgctctcaat gccgcatggg
     9661 cagtttacga tcgatgttaa atttgacgag catcacctgg gcgctgacgg tgccgatcgt
     9721 attgagtttc gggtaaccac caacccaggt cagccaatgc agcctattgc caaagtcgca
     9781 tccggtggtg aattgtcccg catcgcactg gcaacccagg tcatcacggc gcgtaaaatg
     9841 gaaaccccgg cactgatttt tgatgaagtg gatgtaggga ttagcggtcc aacagcggca
     9901 gttgtcggca aactgctgcg tcaactcggc gaatcaactc aggtgatgtg tgttacccac
     9961 ctgccacaag tcgcgggatg tggtcatcaa cactattttg tcagcaaaga aaccgatggt
    10021 gcgatgacag aaacgcatat gcaatccctg aataaaaaag cgcggttaca agagctggcg
    10081 cgcctgcttg gtggcagtga agtcacacgt aatacactgg cgaatgcgaa agaactgctt
    10141 gcagcgtaaa cttttttcct gcttcacggt cagagtaaac agcaaaacgc cgtaagaccg
    10201 gaaagcaaaa ggttttaaag tgatgaaagg tctattatca tcggcatatt acagatgagc
    10261 cacgtactgc tagggcccga aaaggaatca aatcactatg cgctgtaaaa cgctgactgc
    10321 tgcagcagca gtactattga tgttgaccgc aggctgttcc actctggagc gagtggttta
    10381 ccgtcctgac atcaaccagg ggaactatct gaccgctaac gacgtatcca aaatacgtgt
    10441 tggcatgacg caacaacaag ttgcgtacgc attgggtaca ccgctgatgt ccgatccatt
    10501 tggtacgaat acctggttct atgtcttccg ccagcaacca ggtcatgaag gtgtaacgca
    10561 gcaaacgctg acgctgacct ttaacagtag cggtgtgttg accaatattg ataacaaacc
    10621 tgcgctgagt ggtaactaat aataaagttg ctctcaaaga cgttaaaaaa ggtgctcaat
    10681 gagcaccttt tttctgtctg ttatttattc gctgattttt ctgctcgttg cctgcgaagc
    10741 tctttcggat cggcaatgag agggcgataa atctccaccc gatcgccatc atgcacacta
    10801 tcgcttagtt ttgccggacg gctgtaaatg ccgactttgt ttttagttaa atcgatatcg
    10861 gtacgcaatt ccagcaagcc actggcgcga atagcttctt caaccgtcgc gccctcctgc
    10921 agcgtcacgc gctgcaggta ctgcttctca ggtagcgcat aagccacctc aacggcaatt
    10981 ttacctggca ctgtaaacct ctttcgcacg aaccgtaaaa gcctggacca tattagacgc
    11041 cagctcttta aacacgcgac caaaggcgag ttcaatcaac ttattggtaa actcaaagtc
    11101 gagatgaaac tcgatacgac acgcctcctg gctcagcggc gtaaacttcc atccaccaat
    11161 caatttcttg aacggcccat ccaccagatt cataagaata ctttggttac tggtcaactg
    11221 gttgcgggta gtaaacgttt tgctgatccc agccttagag acatctaccg ccgcagtcat
    11281 ctgcccagga gtggactcca gaatccgact tccggtacaa cccggcaaaa actgaggata
    11341 agactgaacg tcattcacta actgatacat ttgctccgcg ctgtagggta ccagtgcggt
    11401 ccggctaatc tgaggcataa ctatttccat caacaaaaat ccaacaaata atatcattta
    11461 tcctgctgta aaaaaaacgc tatcccggcg ctgggtaaca tcgggttcat gctaagatag
    11521 agccttgtcc cccgcaggat tgatatgggg tgttttcgat ttcagattac cgatgattca
    11581 cgacgcttat gacgaagaaa aaagcacata aacctggttc agcgaccatc gcgcttaaca
    11641 agcgcgcccg tcacgaatac tttatcgaag aagagttcga agcgggactt gccctgcaag
    11701 gctgggaagt taaatccctg cgcgcaggaa aagccaatat cagcgacagc tacgtccttc
    11761 tgcgtgacgg agaggcattt ctgtttggcg ctaacatcac gccaatggcc gtggcctcca
    11821 cgcatgtggt gtgcgatcct acccgtaccc gcaagttact tctcaaccag cgcgaactgg
    11881 actcattgta cggtcgcgtc aatcgagaag gctataccgt agtggcgctc tccctgtact
    11941 ggaaaaatgc ctggtgcaaa gtgaaaatcg gcgtcgccaa aggtaaaaaa cagcacgata
    12001 aacgttcaga tatcaaagaa cgcgaatggc aggtggataa agcacgtatc atgaaaaacg
    12061 cccaccgtta aacctgcact ccaattattg accagttcct caccgcgcct ccctctccgg
    12121 cggcgcgaat gaacatctta ttggctatca catccgacac aaatgttgcc atcccattgc
    12181 ttaatcgaat aaaaatcagg ctacatgggt gctaaatctt taacgataac gccattgagg
    12241 ctggtcatgg cgctcataaa tctggtatac ttgccgttac acattggggc tgattctgga
    12301 ttcgacggga tttgcgaaac ccaaggtgca tgccgagggg cggttggcct cgtaaaaagc
    12361 cgcaaaaaat agtcgcaaac gacgaaaact acgctttagc agcttaataa cctgcttaga
    12421 gccctctctc cctagcctcc gctcttagga cggggatcaa gagaggtcaa acccaaaaga
    12481 gatcgcgtgg aagccctgcc tggggttgaa gcgttaaaac ttaatcaggc tagtttgtta
    12541 gtggcgtgtc cgtccgcagc tggcaagcga atgtaaagac tgactaagca tgtagtaccg
    12601 aggacgtagg aatttcggac gcgggttcaa ctcccgccag ctccaccaat catgattgga
    12661 cggtataagg acaacaccaa taaaaacagg aggttagcag tctcagcagg acaccgacca
    12721 gacggtgaag agacataaaa ggatacgcaa aggagccgcg gctcctggtg acatgaaagc
    12781 ccacagatgt gggctttttc gttgatggtc agaacgacca gttcacacca gctaccccgt
    12841 tccacgggga ttccacaccg gcaccatggc tataccccac cccaagatgc ccgcttaacg
    12901 tactgctgaa tgaggcttta atacctgcct ggtatattcc acgtctgccc gacaaatcat
    12961 tgacgaaatt accgtcacta ttcactttca cccggttatc atcgacaaat tctttgcgca
    13021 cagccgcctt cagccacggc tcaacttcca taccgttccc cagacgcatg ttgtaactca
    13081 gcgttgcacc cagttcacga tataaacctg cgggtatcga ctgatttcga ttccatgcca
    13141 ttggataaat gatattcagg gttatcagcg gtgaaccccc gttaacgatg catacggcgt
    13201 caggttccag ttaccatcgg taaatcgcat cccggtttca atgtgaccgc ccagcccgtt
    13261 gctgcgataa ctgccgttgg tggctccacc gctgccaacc gtggagtcgc gagcttcggt
    13321 acctgctaat accaataaat taccgccatt ttccagcaac atattggtcg ctaaattgcc
    13381 ggaaatggaa aaagtgccgt actggtgagt accgctgatt tcaataccgt tagccgtgct
    13441 cgtctggaga gcggcaccgc tgttctggac gatatctgtc gctttgccat tatcgttaac
    13501 tgtcagcgta ccgccttcat tgatctttgt ttttattgcc tctccgttag ctgaaactgt
    13561 ttgtattccg ccgtcgttaa tcgttgtctc attcgccacc ccctcgacga tttgttcgcc
    13621 gccggtgagc gtcgtgcctg tcgcagtggc ttttgttttg acgatctccc gtccgcccgt
    13681 attgacctgt gttttgtcag aagaggtgtc tgactccacg gttaacacgc cgccatttgc
    13741 cagcaggata ttgttcgccg caccctgctc gatgctgaac gcgacgccat ccgcgcgtgt
    13801 tcctgtgacc cgcgtcgccc tggtggttgc aaccaaagcg ccctggctac tctgctgtat
    13861 ccccgttgcg ctgcctttct cccgcacatc gagtgtgccg ccgtcattaa gcaccgagtt
    13921 ttcagccaga ccgccctcat taactacctg tgaaccccca ttaataatgg aaccttccgc
    13981 tgtcccgttt gccataattt gttgtaggcc agagacgata tcggtattga ttgccttacc
    14041 ataattctga acggtttgcg tgccaccatt gatgtgtgtt ttctctgttg acccaccatc
    14101 aacaatttgt tcaccacttt cgatatttgc ctcagtggct aatccatata ccgtttgctt
    14161 gccacctttg atatttgctt tatcagaagt ggcactggca tatattgttt gggtgccagc
    14221 actattgagt acagtgccaa catcttttcc ataaacatcc attttgccgt tggcattaat
    14281 aatcgtatca actgcccggg aaccagtgac gactgttaat gagccagcgt tttccagcac
    14341 tacattttta gcttctgaat tcctgatgta gaaagcatca ccataactgt tggttccttt
    14401 gataagggtt ccggaagttg tggaagcaat taatgcgccg ccggattgtt gctcaacatg
    14461 cttagcctca ccaccgtcct gaacctccag aacgccacca ttattaagtc tggtggtatc
    14521 tgttttagcc tccttctgga caatcagctt accgccagca tcaacggtag tatttttcgc
    14581 cgaggtttta gccactaccg tcagttcgcc ggtattttcc agcacaacat aattagcctc
    14641 ccctccgggt aatagtgaag tgagagagct tgttgtatcc ttcgatatca gtccctgcgc
    14701 ccgtgttggc aactaaagca ctgcccgtct cctggttaac cccatgtgct ataccgccgg
    14761 tatagacaat cagcgagcct ccggcgctaa tattgctgcc agttgccgta ccatctttct
    14821 caacaacctg ccggctcccg gtggaaatat ttgtcgtgtc agctttcccg ccgctcttga
    14881 tattttgtgt tccgctgttg atattggtac ccgtggcaat accatgatta ttaatattct
    14941 gtgtaccacc attgattatg gtattggtcg cgtttccggt aacatccatt accccgccgt
    15001 tatctattcg ggtcgcatca gctttagcat tcgttaaaac tgacattgtt cctttatctt
    15061 taataatcgt cttatttgcc gaaccatatg cgtttatgtc taaatgacca cc
//
LOCUS       DAJVUK010000101        14936 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.101, whole genome shotgun sequence.
ACCESSION   DAJVUK010000101 DAJVUK010000000
VERSION     DAJVUK010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14936
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.101"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..450
                     /locus_tag="OQQ57_002825"
     CDS             <1..450
                     /locus_tag="OQQ57_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HCS1957519.1"
                     /translation="QEVNAALFKEYLPLLQQSEPTIKQPVRWKNALGELNANLDISIA
                     DPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRADKQISGMMT
                     LGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH"
     gene            complement(491..1423)
                     /locus_tag="OQQ57_002826"
     CDS             complement(491..1423)
                     /locus_tag="OQQ57_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HCS1957520.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQDK"
     gene            1787..4573
                     /gene="polA"
                     /locus_tag="OQQ57_002827"
     CDS             1787..4573
                     /gene="polA"
                     /locus_tag="OQQ57_002827"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HCS1957521.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLQQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNPLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRLHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            complement(4955..5587)
                     /locus_tag="OQQ57_002828"
     CDS             complement(4955..5587)
                     /locus_tag="OQQ57_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HCS1957522.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRHSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            6169..6678
                     /gene="yihI"
                     /locus_tag="OQQ57_002829"
     CDS             6169..6678
                     /gene="yihI"
                     /locus_tag="OQQ57_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HCS1957523.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            6867..8240
                     /gene="hemN"
                     /locus_tag="OQQ57_002830"
     CDS             6867..8240
                     /gene="hemN"
                     /locus_tag="OQQ57_002830"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HCS1957524.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(8430..8540)
                     /locus_tag="OQQ57_002831"
     CDS             complement(8430..8540)
                     /locus_tag="OQQ57_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HCS1957525.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(8651..10060)
                     /gene="glnG"
                     /locus_tag="OQQ57_002832"
     CDS             complement(8651..10060)
                     /gene="glnG"
                     /locus_tag="OQQ57_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HCS1957526.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            complement(10072..11121)
                     /gene="glnL"
                     /locus_tag="OQQ57_002833"
     CDS             complement(10072..11121)
                     /gene="glnL"
                     /locus_tag="OQQ57_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HCS1957527.1"
                     /translation="MATGTQPDAGQILNSLINSILLIDDNLEIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            complement(11295..12704)
                     /gene="glnA"
                     /locus_tag="OQQ57_002834"
     CDS             complement(11295..12704)
                     /gene="glnA"
                     /locus_tag="OQQ57_002834"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HCS1957528.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            13077..14900
                     /gene="typA"
                     /locus_tag="OQQ57_002835"
     CDS             13077..14900
                     /gene="typA"
                     /locus_tag="OQQ57_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HCS1957529.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDY"
BASE COUNT         3863 a         3746 c         3849 g         3478 t
ORIGIN      
        1 caagaagtga atgctgcatt gttcaaagag tatttaccgt tattacaaca aagtgagccg
       61 accattaaac aaccggtaag atggaagaac gcactcggcg aactaaatgc caatctggat
      121 atcagtattg ccgacccagc caaatcttca tcatccacaa acaaagatat caaatcgctc
      181 aattttgatg tgaagttacc gcttaatgtc gtcacagaaa ccgcaaaaca gcttaattta
      241 tctgaaggaa tggatgcgga aaaagcgcaa aagcgggctg ataaacaaat cagcgggatg
      301 atgaccttag gtcagatgtt tcagttaatc acgattgaca acaataccgc ctcgctgcaa
      361 ctgcgttata caccgggtaa agttgttttt aacggacagg agatgagcga agaagaattt
      421 atgtctcgtg ccggacgttt tgttcattaa aatactcact cgcctctgct cattcagagg
      481 cgagcaaaat ttacttgtcc tgccgctgtg atgacatcaa cgacgtcaga agtcggtctt
      541 tttcctgcca cagtgagttc agccattgct gaaaatggcg cttaaagctt ttgtcattga
      601 tgtagtcgcc atgtaactca tcggcaatag gctgtaaatc cacatgaacg acaattcgcg
      661 tcagtttacc gcttaacata tcgaagaacg gctgacggtt attgtccgga taacacagcg
      721 taacattaag cagtttatcg aattgtttac ccagtacatt tagcgccatc gcaatgcctg
      781 ccgcctttgg tggcaacaag ttttgaaaag tggagtgggt ttgctgatgt ttttcttgcg
      841 tgaaacggga gccttcaacg aaattgacaa tggtggtggg atgcaggcga aacttttcac
      901 aagaacgccg agtggtttca acatctttac cacgtcgctc cggatgacgt aataaataag
      961 cgcgggaata acgcttcata aacggcatat ccagcgccca gcacgccagg ccaagaaatg
     1021 gcacccaggc cagctgttgc ttgaggaaat atttattcat cggaatgtgc ttacgaaaca
     1081 gcacgcacag tacgacaata tctgcccaac tacggtggtt acaaataagc agataccagt
     1141 tcttcttact taacccttcc agcccgtgaa cttcccattg caggtgtggg ttcagatgca
     1201 gtaataccgc cagaccttca caccagcaat acatcataaa atcacaaaaa cgcgaaacct
     1261 ttcgccaaat gactggcaca ggtagcaata gttttacaat cccggcaatg atgatcggga
     1321 cggaacaaaa aatagtgacc aaaatggtca atacgatact cagcaaaagg gttatcgcag
     1381 cgagtattct cgtcataatg aatttattca aaaggttagc catagacagt gcgctaaaga
     1441 agcgcaaggc gcagatttta gcagaaaacg acccaaataa cggatgatcc ttaaggagaa
     1501 aaataattca tatctatcca cattagaaaa aatcccatta tctcaattat tagggatggc
     1561 tttattttta actacatgaa aaacaaagac aaacatcata ctgtaaaaag catgataata
     1621 aattaaaagc gatgtaaata atttatgcac aaagttatcc acatgacgat ttgcgagcga
     1681 tccagaagat ctacaaaaga ttttcacgaa aagcggtgaa aaactcatgt ttttatcctg
     1741 tctgtggcat cctttaccca taatctgata aacaggcacg gacattatgg ttcagatccc
     1801 ccaaaatcca cttatccttg tagatggttc atcttatctt tatcgcgcat atcacgcgtt
     1861 tcccccgctg actaacagcg caggcgagcc gaccggtgcg atgtatggtg tcctcaacat
     1921 gctgcgcagt ctgatcatgc aatataaacc gacgcatgca gcggtggtct ttgacgccaa
     1981 gggaaaaacc tttcgtgatg aactgtttga acattacaaa tcacatcgcc cgccaatgcc
     2041 ggacgatctg cgagcacaaa tcgaacctct gcacgcgatg gttaaagcga tgggactgcc
     2101 gctgctggcg gtttctggcg tagaagcgga cgacgttatc ggtactctgg cgcgcgaagc
     2161 cgaaaaagcc gggcgtccgg tgctgatcag cactggcgat aaagatatgg cgcagctggt
     2221 gactccaaat attacgctta tcaataccat gacgaatacc atcctcggac cggaagaggt
     2281 ggtgaataag tacggcgtgc cgccagaact gatcatcgat ttcctggcgc tgatgggtga
     2341 ctcctccgat aacatccctg gcgtaccggg cgtcggtgaa aaaaccgcgc aggcattgct
     2401 gcaaggtctg ggcgggctgg atacgctgta tgccgagcca gaaaaaattg ctgggttgag
     2461 cttccgtggc gcgaaaacaa tggcagcgaa gctccagcaa aacaaagaag ttgcttatct
     2521 ctcataccag ctggcgacga ttaaaaccga cgttgaactg gagctgacct gtgaacaact
     2581 ggaagtgcag caaccggcag cggaagagtt gttggggctg ttcaaaaagt atgagttcaa
     2641 acgctggact gctgatgtcg aagcgggcaa atggttacag gccaaagggg caaaaccagc
     2701 cgcgaagccg caggaaacca gtgttgcaga cgaagcgcca gaagtgacgg caacggtgat
     2761 ttcttatgac aactacgtca ccatccttga tgaagaaaca ctgaaagcgt ggattgcgaa
     2821 gctggaaaaa gcgccggtat ttgcatttga taccgaaacc gacagccttg ataacatctc
     2881 tgctaacctg gtcgggcttt cttttgctat cgagccaggc gtagcggcat atattccggt
     2941 tgctcatgat tatcttgatg cgcccgatca aatctctcgc gagcgtgcac tcgagttgct
     3001 aaaaccgctg ctggaagatg aaaaggcgct gaaggtcggg caaaacctga aatacgatcg
     3061 cggtattctg gcgaattacg gcattgagct gcgtgggatt gcgtttgata ccatgctgga
     3121 gtcctacatt ctcaatagcg ttgccgggcg tcacgatatg gacagcctcg cggaacgttg
     3181 gttgaagcac aaaaccatca cttttgaaga gattgcgggt aaaggcaaaa atccactgac
     3241 ctttaaccag attgccctcg aagaggccgg acgttacgcc gccgaagatg ctgatgtcac
     3301 cttgcagttg catctgaaaa tgtggccgga cctgcaaaaa cacaaagggc cgttgaacgt
     3361 cttcgagaat atcgaaatgc cgctggtgcc ggtgctttca cgcattgaac gtaacggtgt
     3421 gaagatcgat ccgaaagtgc tgcacaatca ttctgaagag ctcaccttgc gtctggctga
     3481 gctggaaaag aaagcgcatg aaattgcagg tgaagaattt aacctttctt ccaccaagca
     3541 gttgcaaacc attctgtttg aaaaacaggg tattaaaccg ctgaagaaaa cgccgggtgg
     3601 cgcgccgtca acgtcggaag aggtactgga agaactggcg ctggactatc cgttgccaaa
     3661 agtgattctg gagtatcgtg gtctggcgaa gctgaaatcg acctacaccg acaagctgcc
     3721 gctgatgatc aacccgaaaa ccgggcgttt gcatacctct tatcaccagg cagtaactgc
     3781 aacgggacgt ttatcgtcaa ccgatcctaa cctgcaaaac attccggtgc gtaacgaaga
     3841 aggtcgtcgt atccgccagg cgtttattgc gccagaggat tatgtgattg tctcagcgga
     3901 ctactcgcag attgaactgc gcattatggc gcatctttcg cgtgacaaag gcttgctgac
     3961 cgcattcgcg gaaggaaaag atatccaccg ggcaacggcg gcagaagtgt ttggtttgcc
     4021 actggaaaca gtcaccagcg agcaacgccg tagcgcgaaa gcgatcaact ttggtctgat
     4081 ttatggcatg agtgctttcg gtctggcgcg gcaattgaac attccacgta aagaagcgca
     4141 gaagtacatg gacctttact tcgaacgcta ccctggcgtg ctggagtata tggaacgcac
     4201 ccgtgctcag gcgaaagagc agggctacgt tgaaacgctg gacggacgcc gtctgtatct
     4261 gccggatatc aaatccagca atggtgctcg tcgtgcagcg gctgaacgtg cagccattaa
     4321 cgcgccaatg cagggaaccg ccgccgacat tatcaaacgg gcgatgattg ccgttgatgc
     4381 gtggttacag gctgagcaac cgcgtgtacg tatgatcatg caggtacacg atgaactggt
     4441 atttgaagtt cataaagatg atgttgatgc cgtcgcgaag cagattcatc aactgatgga
     4501 aaactgtacc cgtctggatg tgccgttgct ggtggaagtg gggagtggcg aaaactggga
     4561 tcaggcgcac taagattcgc ctgaacatgc ccttttttcg taagtaagca acataagctg
     4621 tcacgttttg tgatggctat tagaaattcc tatgcaacaa ctgaaaaaaa attacaaaaa
     4681 gtgctttctg aactgaacaa aaaagagtaa agttagtcgc gtagggtaca gaggtaagat
     4741 gttctatctt tcagaccttt tacttcacgt aatcggattt ggctgaatat tttagccgcc
     4801 ccagtcagta atgactgggg cgttttttat tgggcgaaag aaaagatccg taatgcctga
     4861 tgcgctatgt ttatcaggcc aacggtagaa ttgtaatcta ttgaatttac gggccggata
     4921 cgccacatcc ggcacaagca ttaaggcaag aaaattattc gccgtcctgc gtttcttcta
     4981 caggctgcat ctcgctaaac caggtatcca gtttctgccg cagcttgtcc acgccttgtt
     5041 tcttcaacga agaaaacgtt tcaacctgca catcaccgtt aaacgccagt acagcttcac
     5101 gcaccatatt caattgcgct ttacgtgcgc cgcttgccag tttgtccgct ttggtcagca
     5161 gcaccagaac ggcgatattg ctgtctaccg cccactcaat catctgctga tccaaatctt
     5221 tcagcggatg gcgaatatcc attagcacca ccagaccttg caggctatga cgtttttcga
     5281 ggtattcgcc gagcgcacgc tgccatttgc gcttcatctc ttccgggact tccgcataac
     5341 cgtacccagg caagtcaacc agacgcttgc cgtcagccac ttcaaacagg ttgataagct
     5401 gggtgcgccc tggggttttt gaggtacgag ccaggctttt ctggttagtc agcgtgttca
     5461 gcgcgctgga tttacctgcg ttggaacggc ctgcaaaagc cacttcaatt ccggtatcgg
     5521 aaggtaggtg gcgaatatca ggcgcactca tcacaaaatg cgtctgttga taattcaaat
     5581 tagtcaaagc ggtcgtctcc gtcagtcaaa gctttgtggc gattatacct gaaccataat
     5641 aaaaggcgga tttttcggcg tgagcgttgt aagtaaaagc catacgcttt gtgagacatt
     5701 gccgatagtc tttatgcgaa atagcagaga aaattctgcg atgcatgtca aataagctat
     5761 ataaatcagt gaattgcttt tatataaaac tctgaaaatg tgcaaatact gatggcggtt
     5821 gattgtttgt ttaaagcgaa ggcgtaaagt agcacccata gagcgaggac gctaacagga
     5881 acaatgactc aggatgaggg tcaggagcgc caggaggcga agacagagga ttgtcaggaa
     5941 gacaaacgtc cggagacgta attaaacgga aatggaatca acacggattg ttccggctaa
     6001 aggaaaaaca gggtgtgttg gcggcctgca aggattgtaa gacccgttaa gggttatgag
     6061 tcaggaaaaa aggcgacaga gtaatctgtc gccttttttc tttgcttgct ttctgttaga
     6121 ttccgccgca aatcgatact gaataaaacg gctaaaagac gaaccattat gaaaccatca
     6181 tcttcaaact cacgcagcaa aggtcatgca aaagcgcgtc gaaaaacacg cgaggagctg
     6241 gatcaggaag ctcgtgatcg caagcgtcag aaaaaacgtc gtggtcatgc gccgggcagc
     6301 cgcgcagcgg gcggaaacac cacgtcaggc agcaaaggcc agaacgcacc aaaagatcca
     6361 cgtattggca gtaaaacccc tattccattg ggcgtgactg aaaaagtcac caaacagcac
     6421 aaaccgaaga gtgagaaacc tatgctttca ccgcaggcgg agttggaatt actggaaacg
     6481 gatgagcgtc tggatgcgct gctggaacgt ctggaagcag gcgaaaccct gagtgccgaa
     6541 gagcaatcct gggtggatgc taaactggat cgtattgatg agttgatgca gaaactcggc
     6601 ctctcttatg acgatgacga agaagaggaa gaagacgaga agcaagaaga catgatgcgt
     6661 ctgctgcggg gcaactaacg gattgccgcc gtgggccttc ccgttctgct gataaccctt
     6721 ccggttatat gttatctggt gtggttattc gttaaactac agcggttgtc gcggcgacaa
     6781 aagtggctgc gcaaccggct gatgacccga aacgggcatc cgccggtacg ccgtagccgc
     6841 cagagacgcc atcggaagga gtgagcatgt ctgtacagca aatcgactgg gatctggccc
     6901 tgatccagaa atataactat tccgggccac gatacacctc gtacccgacc gcgctggagt
     6961 tttcagaaga cttcggcgaa caggcgtttt tacaagccgt ggcgcgctat cctgagcgtc
     7021 cattatctct ctacgtacat atcccgttct gccataagct ttgttacttc tgcggttgca
     7081 ataagattgt tactcgccag cagcacaagg ccgatcagta tctggacgcg ctggagcaag
     7141 aaatcgtcca tcgtgcaccg ctgttcgccg ggcgtcacgt cagccaattg cactggggcg
     7201 gcggaacgcc gacgtatctg aataaagcgc aaatcagccg cctgatgaag ctgctgcgcg
     7261 aaaacttcca gttcaatgcc gatgcggaga tttcgatcga agtcgatccg cgggaaatcg
     7321 aactggatgt actcgatcat ttacgcgccg aaggctttaa tcgcctgagc atgggcgtgc
     7381 aggacttcaa caaagaagtg caacgtctgg ttaaccgcga gcaggatgaa gagttcatct
     7441 ttgcactgct taaccatgcg cgtgagattg gttttacctc caccaacatc gacctgattt
     7501 acggcctgcc gaaacagacg ccggagagtt tcgcctttac cctgaaacgt gtggcggagc
     7561 tgaaccccga tcgtctgagt gtctttaact acgcgcatct gccgaccatt tttgctgctc
     7621 agcgcaaaat caaagatgct gacctgccga gtccgcagca aaaactcgat atcctgcagg
     7681 aaaccatcgc cttcctgacg caatcgggct atcagtttat cggtatggat cactttgccc
     7741 gtccggatga cgagctggcg gtggcccagc gtgaaggcgt gctgcatcgt aacttccagg
     7801 gctacaccac tcagggcgat accgatctgc tggggatggg cgtttccgcc atcagcatga
     7861 ttggcgactg ctacgcgcag aaccagaaag agttgaagca gtactatcag caagtggatg
     7921 aacaaggcaa tgcgctgtgg cgtggtattg cgctaacgcg tgatgactgt attcgccgcg
     7981 atgtgattaa gtcgctcatc tgcaacttcc gtctggatta cgcccctatt gagaaacagt
     8041 gggatttgca cttcgctgat tactttgcgg aagatctcaa gctgctcgcc ccgttagcaa
     8101 aagatgggct ggtggatgtg gatgagaagg gaatacaggt gacggcgaaa ggtcgcttgc
     8161 tgatccgcaa catttgcatg tgctttgata cctatctgcg ccagaaagcg cggatgcagc
     8221 agttctcacg ggtgatttga atagtgaatg gcgcttcgtt tacaaagtag aaaacgaaag
     8281 cgccatcaat gtgctgagaa caagattgcc tgatgcgcta cgcttatcag gcctacaaaa
     8341 cctgttgaaa atattgcttt tgtaggccgg ataaggcgtt cacgccgcat ccggcatgaa
     8401 caaagagcac ttcatcagca atctgaaact caactaaaca gcccaatcat tgcggcacac
     8461 agcacggcag caacggcagt ttgcggtgtg tggctgtcaa ctgcgccact cgataccaga
     8521 ttaattattg attccagcat aatgactctc cccgttttcc gggcagatca tactgaactt
     8581 atcggaacag taaagcgtaa aataccagca atttgcgctc aataatcaat ctttacacac
     8641 aagctgtgaa tcactccatc cccagctctt ttaacttacg cgtcagggtg ttgcggcccc
     8701 agccgagtag ccgcgccgct tcctgtttat gcccctgcgt atgtcgcaac gcggtcgtca
     8761 gtaacgtccg ctccagctct ggctgcgctt cggaaagcag attttgatga ccggaacgca
     8821 gcgctctgtc tgcccactgc gcaagaagcg tcgcccagct gtccggttgc atttgcgaag
     8881 tactctccgc aaccgttgat tcaaacagtt cgccgggcaa atcctgaatc aacacttcct
     8941 gcccggcggc catcaccgtt agccagcggc aggtgttttc cagctggcgc acgttgcctg
     9001 gccacgccag acgcgtcaga gcagcttcgg tttccggatg cagtaacttc gcttctacgc
     9061 ccagttcgcg cgcggcaacc tgtaaaaaat ggcgcgccag acggggaata tcttcccgac
     9121 gttcgcgcag cggcggtaga tgaacgcgga taacgtttag gcggtggaac agatcctcac
     9181 ggaacttacc ttcctgcact cgctgttcga gattctggtg agtggcagcg ataatccgca
     9241 catccacttt caccggcgca tagccgccaa cgcggtaaaa ctgaccgtct gccagcacgc
     9301 gcagcaaacg cgtctgcaca tccagcggca tatcaccaat ttcgtcgagg aataatgtac
     9361 cgccatcggc ctgttcaaaa cgcccctgac gaatggtatt cgcgccagta aacgcgcctt
     9421 tctcgtggcc aaacagttct gattcgatca aatcttttgg gatagctgcc atattcagcg
     9481 cgataaacgg tgctttggcg cgcggactgt ggcgatgcag ggcatgagcg accagttctt
     9541 taccggtgcc ggattcgccg ttaatcagca cgctaataga agaacgcgaa agccgaccga
     9601 taatacggaa cacgtcctgc atggctggcg cttcgccgat gatatcggtc gttgggccgt
     9661 taagctgaat attacgcggc tgctgctgtt cctggtaatg actgatagcg cgctcaacca
     9721 gcgccacggc ttcgtcgata tcaaacggtt tgggcagata atcaaacgcc ccttgttgat
     9781 aggcgctgac ggcagcatcc agatcggaat gtgcggtcat aatgatgacc ggaagcattg
     9841 gatggcgctg tttaatctgc ttgagcagcg ccagcccgtc cattcccggc atacggatat
     9901 ctgaaagcag cacatccggc gttttgctcg ccagcgcctc cagtacttcc gcgccgttct
     9961 caaatgtcgt acaggttaaa cccgctccag cgagcgcacg ttcaagcacc caacggatgg
    10021 aactatcgtc atcgactacc cagactatcc ctcgttgcat aaacgtcacc tttatttcct
    10081 gataggcagg taaaccgaga actcggtatg acctggccaa ctggtaaatt caattttgcc
    10141 tgaatgctga tcaatcaaat tacgggcgat ggataagcca agcccggtgc caccttcgcg
    10201 gccgctgacc atcgggtaaa acagcgtatc ctgcaaatga ggcggaatgc ccggcccgtt
    10261 atcttccaca tcaatccgcg ccgccagccg gtagcgctcg ccgtgtaagg tcagttgaaa
    10321 cgcggtgcgg gtacgcagaa tgatttcacc gccttccggc cccagcgcct gtagcgcatt
    10381 gcgcacaata ttcagcaaga cctgttcaat ttgatccggg tcgtgcgcca gttccggcag
    10441 gctgggatcg taatcacgaa tcaaccgcac gttgtccggc agttccatcg acaccagcgt
    10501 taccacgcgt tcagccactt tgtgaatact ttcggtaacg cgcgtaccgg gcagctgcgg
    10561 ccccaacaga cggtcgacca gatttcgcag ccggtccgcc tgttcgataa tcactttggt
    10621 atattcgagt agtgatgggt caggtaacgc tttgctgagc agctgcgccg cgccacgtaa
    10681 accgccaagc ggatttttaa tctcatgtgc caggccgcgc actaaatcac gggcagcaac
    10741 ctgctgggcg tgctgtagct gttcctgact taagcggcgc tggttatcca tcggagccat
    10801 ctccagcagg atcatgccgt ccggcatacg ctgggccgtc acagaaagga tatgcgagcg
    10861 cccgtcgatg accagcgtca cttcgttatc ggtaaaacct tgccccgcct ccagactttc
    10921 ttgcatcagc tcgatattta atgagaagta gctcaacagt tccggtaacg gtgtaccaaa
    10981 caatttgcgg gagctttggg cgagcagttg ttgcgcggca gggttggcgt aatggatctc
    11041 caggttgtca tcgattaaca aaatactgtt aatcagcgag ttgaggatct gcccagcatc
    11101 gggctgcgtg cctgttgcca taaagcagtc tcctgaacag gttgcaccat tttagtgcat
    11161 tatagctttt tacggataaa aagcgcgaag catcagagaa ttgacggaga aaaaagccca
    11221 tgcagagatg ggctgaaagt ttccacggca actaaatccc ggcgttgttg cgccgggtag
    11281 tacaacttca actattagac gctgtagtac agctcaaact ctaccggatg cggagtcata
    11341 cgcacgcggt catcttcttc gcgacgcaga gcgatgtacg catcaattgc ttcgtcagtg
    11401 aacacgccac cggctttcag gaactcgcgg tccagatcca gttcgttcag tgcttcttcc
    11461 agagagcctg caacctgtgg gatctctttc gcttcttctg gcggcaggtc atacaggttt
    11521 ttgtccatgg cttcacccgg atggatcttg ttcttgatac catcaagacc ggccatcagc
    11581 agggcagcaa agcacaggta cgggttagct gccggatccg ggaaacgtac ttcgatacga
    11641 cgtgctttcg gagaagaaac caccggaata cggatagacg cagaacggtt acgcgcagag
    11701 taagccagca ttaccggtgc ttcatagccc gggaccagac gcttataaga gttggtggtc
    11761 gggtttgcca gggcgttaat cgctttagcg tgtttgatta cgccgccaat gtagtacagc
    11821 gcctgctcag acagacctgc gtatttgtcg cctgcgaaca ggttaacgcc gtttttagac
    11881 agagacatgt ggcagtgcat accggagccg ttatcaccga acatcggttt tggcataaag
    11941 gtcgcggttt taccgaagcg gtgcgctacg ttgtgcacaa catatttgta gatctgaatt
    12001 tcgtcagctt ttttggtcat ggtattgaag cgggtagcca cttcgttctg accagcagtc
    12061 gctacttcgt ggtgatgggc ttcaaccacc agccccatct gttccatcac cagacacatt
    12121 tcagaacgaa tatcctgagc cgagtctacc ggtggaaccg ggaagtaacc gcctttcact
    12181 gccggacggt gacctttgtt accaccttcg tattgggtgg aggagttcca tgcgccttcg
    12241 atatcgtcga tagcaacgtg ggaaccggag atagatgatc cgaaacggat gtcatcgaac
    12301 aggaagaatt caggttctgg cccgaacagt actgtgtcgg caatgccagt ggaacgcagg
    12361 taatcttcgg cgcgcttcgc aatggagcgc gggtcacggt catagccttg cagggtgcca
    12421 ggttcaagga tgtcgcaacg gataatcagg gtggagtcgg cgaagaacgg gtcaatcact
    12481 gcggtggatg cgtctggcat cagcaccatg tcggactcgt taatgccttt ccagccgcca
    12541 atcgaggagc cgtcaaacat tttgccttct tcgaagaatt cagcattcac ctgatgagca
    12601 gggatagtga cgtgctgttc tttaccttta gtatcggtga agcgcaaatc aacaaacttc
    12661 acttcgtgct cgttcagcat cgtcagtacg tgttcagcgg acatacttta actctcctgg
    12721 attggtcatg gtcgtcgtgg taacgaaatc tgcaattatt ttggccgtgt cgccgtaaaa
    12781 aagataaagc gaaatctgtg ccaactttta aattgcccct aaaaggcgtt atcatgcgca
    12841 ccatcgtgca aaagggctgc accacgatgt gaatgttgca ccaatatagt gcttcaatgg
    12901 aaacattaag caccatgttg gtgcaatgac ctttggataa ccctttttat gctccgtgaa
    12961 agcgatcaca aagggactct gcaatacttg tttgcggagg atgtttgtga tcctgttttg
    13021 tagtgcgatt aatccgtgta caataacgcg ctatttctaa tgcctgaggc aaagttgtga
    13081 tcgaaaaatt gcgtaatatc gccatcatcg cgcacgtaga ccatggtaaa accaccctgg
    13141 tagacaagct gctccaacaa tccggtacgt tcgactctcg tgccgaaacc caagagcgcg
    13201 tgatggactc caacgatttg gagaaagagc gtgggattac catcctcgcg aaaaacaccg
    13261 ctatcaaatg gaatgattac cgtatcaaca tcgttgatac cccggggcac gccgacttcg
    13321 gtggtgaagt tgaacgtgta atgtccatgg tagactcagt gctgctggtg gttgacgcat
    13381 ttgacggccc gatgccgcaa acgcgcttcg taaccaaaaa agcgtttgct tacggcctga
    13441 agccgattgt tgttatcaac aaagttgacc gccctggcgc gcgtcctgat tgggttgtgg
    13501 atcaggtatt cgatctgttc gttaacctcg acgcgaccga cgagcagctg gacttcccga
    13561 tcgtttacgc ttctgcgctg aacggtatcg cgggtctgga ccacgaagat atggcggaag
    13621 acatgacccc gctgtaccag gcgattgttg accacgttcc tgcgccggac gttgaccttg
    13681 acggtccgtt ccagatgcag atttctcagc tcgattacaa cagctatgtt ggcgttatcg
    13741 gcattggccg catcaagcgc ggtaaagtga agccgaacca gcaggtcact atcatcgata
    13801 gcgaaggcaa aacccgcaac gcgaaagtcg gtaaagtgct gggccacctc ggtctggaac
    13861 gtatcgaaac cgacctggcg gaagctggcg atatcgttgc gatcacgggc cttggcgaac
    13921 tgaacatttc tgacaccgtt tgcgacacgc aaaacgttga agcgctgccg gcactctccg
    13981 ttgatgagcc gaccgtttct atgttcttct gcgttaacac ctcgccgttc tgcggtaaag
    14041 aaggtaagtt cgtaacgtct cgtcagatcc tggatcgtct gaacaaagaa ctggtacaca
    14101 acgttgcgct gcgcgtagaa gaaaccgaag acgctgatgc gttccgcgtt tctggtcgtg
    14161 gcgaactaca cctgtctgtt ctgatcgaaa acatgcgtcg tgaaggtttc gaactggcgg
    14221 tatcccgtcc gaaagttatc ttccgtgaaa tcgacggtcg taaacaagag ccatatgaaa
    14281 acgtgactct ggacgttgaa gaacagcatc agggttctgt aatgcaggcg ctgggcgaac
    14341 gtaaaggcga cctgaaaaac atgaatccag acggtaaagg ccgcgtacgt ctcgactacg
    14401 tgatcccaag ccgtggtctg attggcttcc gttctgagtt catgaccatg acttccggta
    14461 ctggtctgct gtactccacc ttcagccact acgacgacgt acgtccgggt gaagtgggtc
    14521 agcgtcagaa cggcgtactg atctctaacg gtcagggtaa agcggtcgcg ttcgcgctgt
    14581 tcggtctgca ggatcgcggt aagctgttcc tcggtcacgg tgcagaagtt tacgaaggtc
    14641 agattatcgg tattcatagc cgctctaacg acctgactgt aaactgcctg accggtaaga
    14701 aactgaccaa catgcgtgct tccggtactg acgaagccgt tgttctggtt ccgcctatcc
    14761 gcatgactct ggaacaagct ctggagttca tcgatgatga cgaactggta gaagtgactc
    14821 cgacctctat ccgtattcgt aaacgtcacc tgacggaaaa cgatcgtcgt cgcgccaacc
    14881 gcgcaccgaa agactattaa tttcgttttt tagttataaa aaacctgcca tcgctg
//
LOCUS       DAJVUK010000102        14563 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.102, whole genome shotgun sequence.
ACCESSION   DAJVUK010000102 DAJVUK010000000
VERSION     DAJVUK010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14563
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.102"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..209)
                     /gene="tuf"
                     /locus_tag="OQQ57_002836"
     CDS             complement(<1..209)
                     /gene="tuf"
                     /locus_tag="OQQ57_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCS1957530.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(280..2394)
                     /gene="fusA"
                     /locus_tag="OQQ57_002837"
     CDS             complement(280..2394)
                     /gene="fusA"
                     /locus_tag="OQQ57_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HCS1957531.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="OQQ57_002838"
     CDS             complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="OQQ57_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015873274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HCS1957532.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="OQQ57_002839"
     CDS             complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="OQQ57_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HCS1957533.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="OQQ57_002840"
     CDS             complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="OQQ57_002840"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HCS1957534.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="OQQ57_002841"
     CDS             complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="OQQ57_002841"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HCS1957535.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
                     FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="OQQ57_002842"
     CDS             complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="OQQ57_002842"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HCS1957536.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYRGGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4598..5320)
                     /locus_tag="OQQ57_002843"
     CDS             complement(4598..5320)
                     /locus_tag="OQQ57_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1957537.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="OQQ57_002844"
     CDS             complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="OQQ57_002844"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCS1957538.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6520..6738
                     /locus_tag="OQQ57_002845"
     CDS             6520..6738
                     /locus_tag="OQQ57_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HCS1957539.1"
                     /translation="MQDLSLEARLAELESRLAFQESTIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="OQQ57_002846"
     CDS             complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="OQQ57_002846"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCS1957540.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7472..7672)
                     /locus_tag="OQQ57_002847"
     CDS             complement(7472..7672)
                     /locus_tag="OQQ57_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HCS1957541.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7682..9493)
                     /gene="kefB"
                     /locus_tag="OQQ57_002848"
     CDS             complement(7682..9493)
                     /gene="kefB"
                     /locus_tag="OQQ57_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
                     /protein_id="HCS1957542.1"
                     /translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP
                     WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL
                     AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
                     IPALALVPLLAGSADEHFDWMKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT
                     AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI
                     SVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG
                     EFAFVLFSTASSQRLFQGDQMALLLVTVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEE
                     DEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY
                     GDATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHE
                     LLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHA
                     DTVQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
     gene            complement(9493..10044)
                     /gene="kefG"
                     /locus_tag="OQQ57_002849"
     CDS             complement(9493..10044)
                     /gene="kefG"
                     /locus_tag="OQQ57_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HCS1957543.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRNVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     KELANHARAYGDWLANPLSPGGR"
     gene            10175..12088
                     /locus_tag="OQQ57_002850"
     CDS             10175..12088
                     /locus_tag="OQQ57_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1957544.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALSQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12088..13110
                     /locus_tag="OQQ57_002851"
     CDS             12088..13110
                     /locus_tag="OQQ57_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCS1957545.1"
                     /translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAAVIVSAPFMLEACTYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13104..13322
                     /locus_tag="OQQ57_002852"
     CDS             13104..13322
                     /locus_tag="OQQ57_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HCS1957546.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13376..14245
                     /locus_tag="OQQ57_002853"
     CDS             13376..14245
                     /locus_tag="OQQ57_002853"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HCS1957547.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
                     EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(14300..>14563)
                     /locus_tag="OQQ57_002854"
     CDS             complement(14300..>14563)
                     /locus_tag="OQQ57_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HCS1957548.1"
                     /translation="SAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIV
                     TGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
BASE COUNT         3599 a         3972 c         3586 g         3406 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcacgagc agcaccgccg taggttttag ccagtacggt ggtgattgca
      121 gcggtcagag tagttttacc gtggtcaacg tggccgatag taccaacgtt aacgtgcggt
      181 tttgtacgtt caaatttttc tttagacacg gctatattcc ttactatagt gctctcccct
      241 tcaggagaga gcacgggact ttggtattaa cccttaggct tatttaccac gggcttcaat
      301 tacggcctga gcaacgttac tcggcgcttc atcatacttc aggaattcca tagtgtatga
      361 tgcacgacct ttggtcagag aacgcagctg agttgcgtat ccgaacattt cagacagcgg
      421 tacttcagcg tggatcttaa cgccagtaac ttcagattcc tgacctttga gcataccacg
      481 acgacggctc aagtcaccga taacgtcacc ggtgttctct tccggagttt ctacttcaac
      541 cttcatgatc ggctcaagca gaactggttt cgctttctta aagccttctt taaaggcgat
      601 agaagcagcc agtttaaacg ccagttcaga ggagtcaacg tcatggtaag aaccgaagtg
      661 cagacgaata cccatgtcta ctaccgggta gcctgccagc ggacctgctt tcagctgttc
      721 ctggatacct ttatcaacgg ccgggatgta ttcgccaggg attacaccac ctttaatgtc
      781 gttgatgaac tcgtagcctt tcgggtttga acccggctcc agcgggtaca tgtcgataac
      841 aacatgacca tactgaccac gaccaccaga ctgtttcgcg tgtttacctt caacatcggt
      901 aactttctgg cggatagttt cacggtaagc aacctgcggt ttacctacgt tcgcttcaac
      961 gttgaattca cgcttcatac ggtcaacgat gatgtcgagg tgcagttcgc ccatacccgc
     1021 gatgattgtc tggttagatt cttcgtcagt ccatacacgg aaagacgggt cttctttagc
     1081 cagacggccc agagccagac ccattttttc ctggtcagct ttggttttcg gttcaactgc
     1141 gatggagatt accggctcag ggaattccat acgttccaga atgatcggcg catccgggtc
     1201 acacagggtg tcaccagtgg ttacgtcttt cagaccgata gcagcagcga tgtcgcccgc
     1261 gcgaacttct ttgatctctt cacgtttgtt agcgtgcatc tgaacgatac gaccgaaacg
     1321 ctcacgtgca gctttcacgg agttcagtac ggtatcacca gagttaacca caccggagta
     1381 aacacggaag aaggtcaggt taccaacaaa cgggtcggta gcgattttga acgccagtgc
     1441 agagaacggc tcgtcatcac ttgcgtgacg ttcagccgga gtgtctttac cgtcgtccag
     1501 gataccgttg atcgcaggta cgtcaaccgg ggatggcagg taatcaatta ccgcatccag
     1561 catcgcctga acacctttgt tcttgaacgc agaaccacag gttaccagga tgatttcgtt
     1621 gttcagaacg cgctgacgca gagcaccttt gatttctgct tcagtcagtt cttcaccacc
     1681 caggtatttt tccatcagct cttcagaagc ttcagctgcg gattcgatca ggttctggtg
     1741 ccattcgtta gccagttcaa ccatgtctgc cgggatatct tcgtattcga aggttacgcc
     1801 ctggtcagcg tcgttccagt taatagcttt cattttcacc aggtcaacaa caccggtgaa
     1861 atgttcttca gcaccaatcg ccagctgcag cggaaccgga ttcgcgccca gacgggtttt
     1921 gatctggtta acaactttca ggaagttcgc acccatgcgg tccattttgt taacgaacgc
     1981 aatgcgcgga actttatatt tgtttgcctg acgccatacg gtttcagact gcggctgaac
     2041 accaccaact gcgcagtaaa ccattaccgc accatcgaga acacgcatgg aacgttctac
     2101 ttcgattgtg aagtcaacgt gccccggggt gtcgatgatg ttgatgcgat gcggctcata
     2161 ctgcttagcc ataccagacc agaatgcagt agtcgcagcg gaagtgatgg taataccacg
     2221 ttcctgctcc tgctccatcc agtccatggt tgcagcgccg tcatgaactt cacctatttt
     2281 atggtttaca ccggtgtaga acagaatacg ttcggtagta gtggttttac cggcgtcgat
     2341 gtgcgcactg ataccgatgt tacggtagcg tgcgatgggt gttgtacgag ccatttgttt
     2401 cctcgtttat cttttaggcg ttcaatttaa gtagcccaaa gcgggctgct tactggaagc
     2461 gcccgcctgg tgactaaaac tccgaaggga ttaccaacgg tagtgtgcga acgccttgtt
     2521 ggcttcggcc atacggtgaa cgtcttcacg tttcttaact gcagtacctt tgttttctgc
     2581 agcatcagaa agttcgttcg ccaggcgcag agccatggat ttatcaccgc gtttacgagc
     2641 agcttcaacg atccaacgca ttgccagagc attacgacga accggacgga cttcaactgg
     2701 tacctgataa gtagaaccac caacgcggcg agacttaact tctacagtcg ggcgcacgtt
     2761 ttcgagagct acttcgaatg cttccagttc agatttacca gagcgctgag ccagggtctc
     2821 cagcgcgctg tatacgatag attcagcagt agatttttta ccatctacca tcaggatatt
     2881 tacaaattta gccagcagtt ctgatccgaa cttcggatcc ggcagaattt tacgctgacc
     2941 aatgacgcga cgacgtggca tggaaatact ccgttgttaa ttcaggattg tccaaaactc
     3001 tacgagttta gtttgacatt taagttaaaa cgtttggcct tacttaacgg agaaccatta
     3061 agccttagga cgcttcacgc catacttgga acgagcctgc ttacggtctt taacgccgga
     3121 gcagtcaagc gcaccacgta cggtgtggta acgaacaccc gggaggtctt taacacgacc
     3181 gccacggatc aggatcacgg agtgctcctg caggttgtga ccttcaccac cgatgtagga
     3241 agtcacttcg aaaccgttag tcagacgaac acggcatact ttacgcagcg cggagttcgg
     3301 ttttttagga gtggtagtat atacacgagt acatacgcca cgtttttgcg ggcatgcttc
     3361 cagcgcaggc acgttgcttt tcgcaacttt gcgagcacgt ggtttgcgta ccagctggtt
     3421 aactgttgcc attaaatagc tcctggtttt agcttttgct tcgtaaacac gtaataaaac
     3481 gtcctcacac aatatgagga cgccgaattt tagggcgatg ccgaaaaggt gtcaagaaat
     3541 atacaacgat cccgccatca ccaggccatc tggctggagt gcttaaccgt aagtctgacg
     3601 aaatcagtat agtcaatggg aatgatgtcg ttcgaaattt gaccagtcaa accgcgggca
     3661 ataaggtctt cgttcagggc atagacctta atgggggcat tacgcagact ttcaaggtag
     3721 cggttaccgt caactgcggc agttacgcca tcttgcaata atagcagttc gtctccttca
     3781 ctgagcagac gcagcagcgc agcaaaatcc gtcagccagg gtgaacgatg taacgtgtgc
     3841 agcataaacg cctcaaaacc tcaaaataac atcgtagttg gcgagttcgc ggcgtaaggc
     3901 atctgcttcg agcggcgtgg cttcgacaac aaagggtgtc tgcggatcta acccgcgttc
     3961 gcgcagtgaa gccgcacaaa cccagcactg ttcaatgtcg tacagaccca acaatttaaa
     4021 agtggcaatg taatcacgcg ccagcactgc atcgggcttt tgtcctgaca gcagctgaaa
     4081 aacgccatca gcaataaaga agacggccag atcgtcagtt aatgcggaag ttgccagtaa
     4141 agcatctaaa ccttcccgac cagcagctgt accatgaggt gcagtagaaa aaacaaacgc
     4201 aattcgtttc atcagaactg taccaccctg tcacaggtca gcgaggcttc cgccagcgcg
     4261 ccaagtccgc ttaaggtaaa tcccggctga aggtttgacg aagccagccc cagccttcct
     4321 gcttcagttt catcgacgat accgcggcgt aacgctgccg ctacgcagat attcagcgcc
     4381 acaccatgtt gcgcattcaa ctgttgccag ccgcgcacaa ggtcaaattc gtcacttgcc
     4441 ggtgaggtca attggttagc gttatagacc cctccccgat agaaaaagac gctgcttaac
     4501 tcatggcctt ctactatcag cgcctgcgca aactgaaaag cactactcgc ctgttgcgta
     4561 ccgtatgctg gcccggtcac cacgatggca aaacgcatta cttatcttgc ccctggaaat
     4621 caccgctctt gaactggcgg atgtagagat agacagtgtg tttggagatg ttcaggcggt
     4681 cagcaacctg gttgatcgca tctttaatat cgaagatccc tttctcgtag agattcagca
     4741 cgatctgacg atttttggcg ttattagaaa cattgcgatc ggcattcact tcttcgatgg
     4801 tgaactccag cgtttgggta accagatctt caacagaaga ggcaaagttg acgcttgaac
     4861 cgacatccgg ggtttctggc ggcacaaaag tgctcataat ctgcgagaag ggaacatcaa
     4921 gattcatatt gatgcacagc agaccaatta cacgctgttc gcggttacga atcgcgatag
     4981 tcagggactt cattaatacg ccgcttttgg cgcgagtaaa gtagcattta gaaacgctgc
     5041 tatccgctcc cgtcatatcg tgcagcatac gtagcgccag gtcagtaatt ggcgaaccaa
     5101 tcttccggcc tgtatgttca ccgttagcaa tgcgaatggc tgaacatttt agatcctgca
     5161 aagagtgcaa aacgatttca cagtgggagc caataagcat cgctaacccg tccaccaccg
     5221 cttcgtagga tttcagaata tcaaaatcgg tctggtcgaa aggacgttga tccagtaaat
     5281 ccaactcact ggtttcgttg gttaaaagcg acctggacat gaaaaaaaac actccttttc
     5341 aggagcctgt cgttaacttt tcagggcagg ctcattaatg atgcgggtaa ctaaattaat
     5401 acagcggagg ttccgctttc cagcactaat tatatccggc ctgtaataaa aaaaccgccg
     5461 cctggtcagg cggcggttct taatgcttat tttttagcag aatctgcggc tttcgcatca
     5521 gcttccggct ttgcatcagc cttcggtgct ggtttcacat ccagcagctc tacgtcaaac
     5581 accagggtag aattcggtgg gatccccgga acacccgctt tgccgtaagc cagttctggt
     5641 ggaataacca gtttgatctt accgcctttc ttgatgttct tcagaccttc tgtccaaccc
     5701 gggataacac cgtccagacg gaaagaaagc ggttcaccac gggtgtaaga gttgtcgaac
     5761 tctttaccgt cgatcagcgt acctttgtag ttcactacaa cagtatcgct gtctttcggt
     5821 gcttcgcctt taccggcttc tactacctga taaaccagac cagttgaaga ggttttcaca
     5881 cctttctctt tggcaaattt ctcgcggtac tctttacctt ttgcttcgtt atcagccgcg
     5941 tctttttcca tcttcgcctg agcagaagac ttcacgcgag cttcgaatgc ttgcagagtc
     6001 tgttcgatct cttggtcgga gagtttgctc ttatcagcaa atgcatcctg aacaccagcg
     6061 atcagctgat ctttatccag tttgatgccc agtttttctt gttctttaag agagttttcc
     6121 atgtaacgac ccagcgaagc acccagtgca taagctgatt tctgatcgtc atttttgaac
     6181 gctgctttgc tgtcagcagt tgtagcaggt tttgcagctt cagcagcaaa agtgattggt
     6241 gcatgcaggg caacggccat tgtggtcgcc agcagcgtta ctttaaacag tgatttcatc
     6301 catatctcca ggatcggggc atctcacccc agggttaact attatcagaa gggtactata
     6361 aagcgttgtc gaacaaatct acatacagac acgccctatt atcatctatt ttcagactct
     6421 ttttgtttaa attagtttcg atgaccgcga aatgagtgct gtctcgggca gcaaagttaa
     6481 gtagaatccg cggcaaccat tcgacaaaag aggtgaatca tgcaggattt atcattggaa
     6541 gcacgcctgg cagagctgga gagccgactg gcttttcagg aaagcaccat tgaagaactg
     6601 aacgtcacgg tgaccgctca tgaaatggag atggcgaaac tgcgcgatca tctgcgtctg
     6661 ctgaccgaga agttaaaagc cagccagccg tcgaacatcg cgtcgcaggc tgaagaaacg
     6721 ccaccgccac attattgagg cgtaaaaaaa gcggggattc cccgcttttt tgtcaccttt
     6781 tcggtattag tggcaaccac aaccgccgtt gcctttaccg ccacagcagc cttcgccacc
     6841 gtgttcatga ccgtgatcgt ggccatgacc gccgcagcaa ccgtcgtggt cgtgatcgtg
     6901 gtgatgatcg tgcgcgccgt gaacgtgacc atgagccagt tcttcttcgg tcgcttcacg
     6961 aatcgccaca acctcaacgt tgaatttcag gttctgaccg gccagcatgt ggttaccatc
     7021 aaccactacg tgatcgtctt caaccgcagt gatttcaacc ggtaccggcc cctggtcggt
     7081 ttcagccagg aaacgcatac ctacctgcag ttcatcaacg cccataaata cgtctttagg
     7141 aacacgttgc accaggtttt cgtcgtactg accgtaagcg tcgttcgcgc caacagcgac
     7201 atcaaatttg tcgccaactt catgaccttc cagcgccgtt tccaggccag agatcaggga
     7261 accgtgacca tgcaggtagt ccagcggcgc actcaccgga gactcatcaa ccaacacacc
     7321 gtcttctgta cgtacctgat aggccaggct gaccaccagg tcttttgcta ctttcatgat
     7381 atctcctgag catgggaaga atagtggcgc agattgtagc ggaattctgc agccgtgtac
     7441 tcactagctt aaaaaaactc ggcgcatatc gctagtccgg atgaaaaatc ccgatcactt
     7501 gctcatcttt gcgaacgtga tcgcgggctt ctttgtctgc ttctcgcatc tgatgtccgc
     7561 acttaacgca ttcaacaata tcaatattat tttcgcgcca catcgccatt gaatcctgtg
     7621 cctgacaggc cgggcatttt gcgcccgcaa taaaacgttt tcggattgcc atctttaccc
     7681 tctactcaaa ttcatcccag ccgtccagct ggcgtcgttc ttgttgcatt tcacgctgga
     7741 aaatctcttc cagttcgcgt cgggcttccc tggcgcgaga aatttgtaca gtatcggcat
     7801 gcattgggat gagctctcgc agcatccgca tatccaggcg gcgaaaatgc agttgcgccc
     7861 gctgcgcctg atgcggatgc atcccaagcg tgaccaaagt cttgcgcccc agctctaacg
     7921 cactggagaa tgtttcacgg gaaaactgcg tcacccctgc ctgtaataac tcatgcgctt
     7981 ccacacgtcc gcgcgctcgc gcaagaatat gcaaatgcgg aaagtgctgc tggcatattt
     8041 ccaccagctt catggtgtct tccggctcgt tacaggtaat gacgatagac tcagcggcct
     8101 ctgcacccgc agaacgtaat agatcgacct gcgtggcgtc gccgtaataa actttgtagc
     8161 catatttacg catcaggtta acggcgctga tatcccgctc cagcacggta atgcgcattt
     8221 tatttgccat cagcaaacga ccaatcacct gaccaaaacg cccgaagccc acgacaatga
     8281 cctggggttt atcatcgttg acccacggtt tttcgtcttc ttcttccggt ccgttaaact
     8341 ggcgggataa ccatttatcc accagcttca tcagcaacgg cgtggtcatc atggaaagcg
     8401 tcaccgtcac cgtcaccagc aacagcgcca tctggtcgcc ctggaataaa cgttgtgaag
     8461 aagcggtaga aaagaggaca aaggcaaact caccgccctg actcaacacg ccagcaaact
     8521 gcatccgctc tgagctacgc acgccataca atcgcgccag cagatacagc acgagaattt
     8581 tcaccgccac cagcacaacc acgcttatca ctacccacaa cagatgggta taaagcaccc
     8641 cgaggttgag cgacatgccg acagagataa agaacaaacc gagcagcaag cctttgaagg
     8701 gatcgatagc cgtttccagt tcatggcgat attcactttc cgccagcagc acgcccgcaa
     8761 taaatgtacc gagcgccatc gacagcccca gcgcatccat aaacaatgcg gaacccaaca
     8821 ccagcagcag cgtcgcggcg gtgaacactt cccgcacgcc agaagctgca ataaagcgga
     8881 ataccggacg cagtaaatag cgcccaccaa tcagcatgcc gacaaacgcc agcaccttca
     8941 tgccgatctt catccagtcg aaatgttcgt ctgccgaccc cgccaacaac ggcactaacg
     9001 ccagtgctgg gatcactgcc agatcctgaa acagcagaac cgaaaacccg agctggccgg
     9061 attcgctgcg attcatccct ttctcacgca tcaattgcaa cgccattgca gttgaagaca
     9121 tcgcaaggcc aatgccaccg accaccgccg cctgccaggc gaaatccgtc agcatcaata
     9181 atcccgccag caacgccgcg cttaacagca cctgtgccgc gcctacgcca aaaatcgaac
     9241 gccgcagttg ccaaagtttg gagggattca actcaaggcc gatgataaac atcaggaata
     9301 ccacgccgag ttccgaaaag tggaggatct catcgacgtc gctaataaac cccagccccc
     9361 acgggccaat tgcaatccct gccagcaaat atcccaacac agcgccaatc cccagccgcg
     9421 atgccaacgg caccgcagcc accgccgcga agagaaacag cactcctgcg agtaaaaaat
     9481 cggaaccttc catcagcggc ctcctggaga cagcggattt gccagccagt caccgtaggc
     9541 tctggcgtgg ttcgccagct cctttgcgct ttgccgtctc gcccagtaaa taatgatggg
     9601 acttaaccaa tgcatccggc acatgcccgc cgccagttca aaggggcgca gcacatcgct
     9661 catcgggtag cgattcagcg cgtcataacg gtaagcactt tccggctcgc cggtggtaat
     9721 cacgttacgc cagtactttc ccgccagttg gtttcctccc ggcccgctgg caaaaccacg
     9781 acttaatacc cggtccagcc actctttcag tagcgccggg cagctatagg tataaagagg
     9841 atgctgaaag acaatcacct cgtgctcgcg cagtaatgcc tgctcacggg ggatatcaat
     9901 aaaaaaatcg ggatagtgcg cgtaaaggtc gtgcacggta acattgctga gctgcgtggc
     9961 cggtttaagc agtacccggt ttgccaccga gtcctgagat tccggatggg catacagcag
    10021 caaaactttc gctggctgag acatcatccc cctcccggta tggtttttgt gtatagtcgc
    10081 tgttttgggc taccattgcg cccggtgcgg cagctcgccc atacattaca ttatcataat
    10141 gataagttaa catagtctga acatacggcg ccttatgatt gttttctcct cgttacaaat
    10201 tcgtcgcggc gtgcgcgtcc tgctggataa tgccaccgcc accatcaacc ctgggcagaa
    10261 agtcggcctg gtgggtaaaa acggctgtgg taaatctacc ctgctggcat tgctgaaaaa
    10321 tgaaatcagc gccgacggcg gcagctacac ctttccggga agctggcaac tggcgtgggt
    10381 gaatcaggaa acgccggcgt tatcgcaagc ggcgctggaa tatgtcattg acggcgaccg
    10441 tgaatatcgt caactggaag cgcagctgca cgacgccaac gaacgtaacg acgggcacgc
    10501 cattgcgacc attcatggca agctggatgc tattgacgca tggagtattc gctcccgtgc
    10561 cgccagcctg ctgcacggcc tcggtttcag caatgaacaa ctggagcgcc cggtaagtga
    10621 tttctccggt ggctggcgta tgcgtcttaa ccttgcccag gcgctgattt gccgttcaga
    10681 cttgctgctg ctcgacgaac cgactaacca cctcgatctc gatgccgtta tctggctgga
    10741 aaaatggttg aagagctatc aaggcacgct gatcctgatc tctcacgacc gcgacttcct
    10801 cgatccgatc gttgataaaa ttattcatat cgaacaacaa agcatgttcg agtacaccgg
    10861 caactacagt tcgtttgaag tacagcgcgc cacccgtctg gcgcaacaac aagcgatgta
    10921 tgaaagccag caggaacgcg tggcacatct gcaaagttat atcgaccgtt tccgtgccaa
    10981 agccaccaaa gcgaagcaag cccagagccg cattaagatg cttgagcgta tggagctgat
    11041 tgcccccgcg cacgtcgaca acccgttccg ctttagcttc cgcgcgccgg aaagcctgcc
    11101 aaatccgtta ctgaagatgg aaaaagtcag cgcgggctat ggcgatcgca ttattctcga
    11161 ctcgattaaa ctgaacctgg tgcccggctc gcgcattggt ctgttaggcc gcaacggcgc
    11221 gggtaaatcg acattaatca aactgttagc cggtgaactt gcgccagtca gcggtgaaat
    11281 tggtctggcg aaagggatca agctcggcta cttcgcccag catcaacttg aatacctgcg
    11341 cgccgacgaa tcacctattc aacatctggc acgtttagcg ccgcaggagc tggaacaaaa
    11401 actgcgtgac tacctcggcg gctttggttt ccagggcgat aaagtaaccg aagaaacgcg
    11461 ccgcttctcc ggtggggaaa aagcccgcct ggtgctggca ttaattgtct ggcagcgtcc
    11521 gaatctgctg ctgctcgacg aaccgactaa ccaccttgac ctcgacatgc gtcaggcact
    11581 caccgaagca ttaatcgagt ttgaaggcgc gctggttgtc gtttcgcacg accgtcattt
    11641 gctgcgttcc accactgacg atctctacct ggttcacgat cgtaaagtcg aaccgttcga
    11701 cggcgatctg gaagattatc aacagtggtt gagcgacgta caaaagcagg aaaaccagac
    11761 cgacgaagcg ccaaaagaga acgcgaacag cgcccaggca cgtaaagatc agaagcgtcg
    11821 ggaagcggag ctgcgtgcgc aaacccagcc gctgcgtaaa gagattgccc gtctggaaaa
    11881 agagatggag aagctgaacg cgcaactggc gcaggcggaa gagaaactcg gcgacagcga
    11941 actgtatgac cagagccgta aagcggagtt gaccgcctgc ctgcaacagc aagccagcgc
    12001 caaatccggc ctggaagagt gcgaaatggc gtggctggaa gcccaggagc agcttgagca
    12061 gatgctgctg gaaggccaaa gcaactgatg gcgcagataa cgacgaccga tgccaatgaa
    12121 ttcagcagca gtgctgaatt cacccctatg cgcggcttta gcaattgtca tctacaaact
    12181 atgctgccgc gtttgtttcg tcgtcaggtg aaattcaccc cgtactggca gcggctggag
    12241 ttgcccgacg gcgattttgt cgatctcgcg tggagtgaag cccctgcaca ggctcggcat
    12301 aaaccgcgtt tagtgatatt tcacgggctg gaaggcagtc tcaatagccc ttacgcccac
    12361 ggtctggttg aggcggcgca aaagcgcggc tggctgggcg tggtgatgca ttttcgcgga
    12421 tgcagcggtg aaccaaaccg tatgcaccgc atttaccatt cgggcgaaac cgaagacgcc
    12481 agttggtttt tacgctggct gcaacgcgaa tttggtcatg cgccaacggc tgccgtcggc
    12541 tattcgctcg gcggtaatat gctggcctgt ttgctggcaa aggaaggcaa tgatctcccg
    12601 gttgatgcgg cggtgattgt ctctgcgccg tttatgctgg aagcctgtac ctatcatatg
    12661 gaaaagggct tttcccgcgt ttatcagcgt tacttgctga acctgttaaa agccaatgcc
    12721 gcgcgcaagc tggcagccta ccccggaacg ctgccgatta atctcgcgca gttaaaatcg
    12781 gtacgtcgca tccgtgaatt tgacgatcta atcaccgcca gaattcacgg ctacgccgac
    12841 gctatcgact attatcgtca gtgtagcgcc atgccgatgc tgaaccggat cgccaaaccg
    12901 acgctgatta ttcacgccaa agacgatccg tttatggatc atcaggtgat cccgaaaccg
    12961 gaaagtctcc cctcgcaggt ggagtatcaa ctgactgaac atggcggtca tgttggcttt
    13021 attggcggta cattacttca tccgcaaatg tggctggagt cacgcattcc tgactggtta
    13081 acaacgtatc tggaggcgaa atcatgttga ttccgtggca agacctctcc cccgaaacgc
    13141 tggaaaattt aattgaaagc tttgtgttac gtgaaggcac cgattatggt gaacatgagc
    13201 gtacacttga acagaaagtc gccgacgtca aacgccagct acagtgcgga gaagcggtgc
    13261 tggtatggtc ggagctgcac gaaacggtca atattatgcc gcgcagtcag tttcgcgaat
    13321 aacctgcaac cgtcggcgga cgagataata atgatagcta agtcatggag ttactatgtc
    13381 tgccaaacat ccggtcattg cggtaacagg atccagcggc gcggggacca ccaccaccag
    13441 cctcgcgttt cgtaaaatat tcgcgcagtt aaatctgcat gcagctgagg tggaaggcga
    13501 cagttttcac cgttacaccc gcccggaaat ggacatggcg atccgcaaag cgcgcgacgc
    13561 cgggcggcat atcagctact tcggccccga agcgaacgac ttcggcctgc tggaacaaac
    13621 cttcattgaa tacggtcaga gcggcaaagg gaaatctcgc aaatatctgc atacctacga
    13681 cgaagccgta ccgtggaatc aggtaccggg aacattcacc ccctggcaac ctttaccaga
    13741 acccactgat gtactgtttt atgaaggttt acacggcggc gtagtcacgc cacagcataa
    13801 cgttgcgcag catgtggact tactggtcgg cgtagtgcct atcgttaacc ttgagtggat
    13861 tcaaaaactg atccgcgaca ccagcgagcg cgggcactca cgagaagcag tgatggactc
    13921 agtagtgcgt tcaatggaag actatatcaa ctacatcaca ccgcagtttt cccgcaccca
    13981 tcttaacttc cagcgcgttc ccaccgtcga cacttcaaac ccgttcgcgg caaaaggtat
    14041 cccgtcgctg gatgaaagct ttgtggtgat ccattttcgt aatctggaag ggatcgattt
    14101 cccctggctg ctggcgatgt tgcaaggctc attcatttcc cacatcaata cgttagtggt
    14161 accgggcggc aaaatgggtc tggcaatgga attaattatg ctgccgctgg tgcaacgatt
    14221 gatggaagga aagaaaatcg agtaactctg ctattacgcc ggataaaata ctatccggct
    14281 tcacaacggg atagttaaat cacgcggcaa ccacttcata cgagtgagta atattcaccg
    14341 ctttttccag catcaacgcc actgaacaat atttctcggc agagagatca accgcacgcg
    14401 caaccgctgc gtctttcagg tcgcgaccgg tgacgataaa atgcagatta atgtgcgtaa
    14461 acaggcgtgg tgcctcttcg cggcgttcag aggtcaattt tacttcacaa tcgaccacat
    14521 cctgacgccc tttttgcagg atcgaaacca catcgatggc act
//
LOCUS       DAJVUK010000103        14460 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.103, whole genome shotgun sequence.
ACCESSION   DAJVUK010000103 DAJVUK010000000
VERSION     DAJVUK010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14460
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.103"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(33..212)
                     /locus_tag="OQQ57_002855"
     CDS             complement(33..212)
                     /locus_tag="OQQ57_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001039895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957549.1"
                     /translation="MNKPQLAESQKTALLTEAESVIRPRGRAVRLNRETDESGEARGR
                     ASVFPESVRSVVYAM"
     gene            complement(212..835)
                     /locus_tag="OQQ57_002856"
     CDS             complement(212..835)
                     /locus_tag="OQQ57_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HCS1957550.1"
                     /translation="MYMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFD
                     DRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAW
                     RAEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSM
                     PELEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE"
     gene            complement(786..2201)
                     /locus_tag="OQQ57_002857"
     CDS             complement(786..2201)
                     /locus_tag="OQQ57_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1957551.1"
                     /translation="MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTD
                     NNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKDGDLRPEV
                     MKRFEEMVVQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAENARQDATVTAEDRK
                     ATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAAG
                     EKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSD
                     FLAWVRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGI
                     NGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRWGDPDIGGLIIAAYQG
                     EADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCA
                     LSGGPDVHVSGAMPGLFIRTS"
     gene            complement(2265..2864)
                     /locus_tag="OQQ57_002858"
     CDS             complement(2265..2864)
                     /locus_tag="OQQ57_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HCS1957552.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLQPHTDMPG
                     SDDLKGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAW
                     GAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF"
     gene            complement(2932..6411)
                     /locus_tag="OQQ57_002859"
     CDS             complement(2932..6411)
                     /locus_tag="OQQ57_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HCS1957553.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKS
                     VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGVESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRLTFGVQALVENTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCR
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNVVEVNWIDPDNGHETATELVEDAQAILRYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLD
                     REITLPSSCTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQ
                     LALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITAVPKLAVYDP
                     TVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKS
                     AFVEAVGRASDDAEGYLSFYKGLINNTHLGKELWTQIDNGQLAPDLTEIRTSITNVSN
                     EITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIEN
                     TPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNP
                     PAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVG
                     KPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCSLI
                     VKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLV
                     VVMKKATAGITIS"
     gene            complement(6472..7074)
                     /locus_tag="OQQ57_002860"
     CDS             complement(6472..7074)
                     /locus_tag="OQQ57_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HCS1957554.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVA
                     IWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMV
                     AQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            complement(7011..7754)
                     /locus_tag="OQQ57_002861"
     CDS             complement(7011..7754)
                     /locus_tag="OQQ57_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957555.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVRTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
                     GLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHREWHASAFTGICNDLAAASTFV"
     gene            complement(7759..8458)
                     /locus_tag="OQQ57_002862"
                     /pseudo
     CDS             complement(7759..8458)
                     /locus_tag="OQQ57_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706643.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            complement(8458..8787)
                     /locus_tag="OQQ57_002863"
     CDS             complement(8458..8787)
                     /locus_tag="OQQ57_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957556.1"
                     /translation="METFRWKVRPDMNVVSEPKVVAVKLGDGYEQRRPAGLNNLLSTY
                     SVTIRVRKGEHPPLKAFLERHGGVRAFQWTPPYDWKPIRVACRKWSASVGALWVTVTA
                     DFEQVVN"
     gene            complement(8787..11828)
                     /locus_tag="OQQ57_002864"
     CDS             complement(8787..11828)
                     /locus_tag="OQQ57_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1957557.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAAGDAERSSARMQ
                     RFMERQTQAARQTMHAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
                     MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
                     DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
                     SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
                     GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEEFNRQLALTGHYAGVTVG
                     QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNALHFLTATQLEQIRVLGEQGRSSDAARIAMSALAEETG
                     KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
                     WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
                     QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
                     ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
                     KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
                     YWQELEVAQGDWKNGAMRAFQNFTADADNAVGTAEQMFTVAFSSAGNALATFCTTGKL
                     NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
                     RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIGINND
                     GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
     gene            complement(11800..12128)
                     /locus_tag="OQQ57_002865"
                     /pseudo
     CDS             complement(11800..12128)
                     /locus_tag="OQQ57_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
     gene            complement(12137..12523)
                     /locus_tag="OQQ57_002866"
     CDS             complement(12137..12523)
                     /locus_tag="OQQ57_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707739.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HCS1957558.1"
                     /translation="MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEG
                     ELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAER
                     VLSLSGMGTIENAGDDDHEALTPEKS"
     gene            complement(12582..13322)
                     /locus_tag="OQQ57_002867"
     CDS             complement(12582..13322)
                     /locus_tag="OQQ57_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707740.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HCS1957559.1"
                     /translation="MTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKD
                     LQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTLATLAWRPGDSGQKKLVQLFDS
                     GEVCAFRIKYPNGTVDVFRGWLSSLGKTITSKEVMTRTVKISGVGRPYLAEEGAETVG
                     VTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKG
                     VKQGSVSIVGMTSDGEFVAVAAVTVSAP"
     gene            complement(13333..13734)
                     /locus_tag="OQQ57_002868"
     CDS             complement(13333..13734)
                     /locus_tag="OQQ57_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957560.1"
                     /translation="MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVW
                     LSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLID
                     TMIPLGFNYQRDNEMATWAMAEITYQITYTN"
     gene            complement(13731..14318)
                     /locus_tag="OQQ57_002869"
     CDS             complement(13731..14318)
                     /locus_tag="OQQ57_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957561.1"
                     /translation="MRGLENAIRNLNSLDTRMVPQASAWAVNRVAAKVVSVATRQVAR
                     NTVAGDNQVKGGPLKLVRQRVRVFKASPAGKMYARIRVNRGNLPAIKLGTTCRRAGDG
                     LKVGKYFFRGAFIQQLANGRWHVLRRLPEACFETGKDSKGRPRKNRLPVEVVKIPLAG
                     PLTQAFEDARDRIIAAEMPKQLGYALKQQLRIHLG"
     gene            complement(14305..>14460)
                     /locus_tag="OQQ57_002870"
     CDS             complement(14305..>14460)
                     /locus_tag="OQQ57_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957562.1"
                     /translation="ILQLCRNDSLMIGRESFSVDRITPDDGGCSYIRLRREGAGNVRA
                     GGYYEGA"
BASE COUNT         3008 a         4608 c         3433 g         3411 t
ORIGIN      
        1 ctgaaaacgg ctcacaactg caccattcat aatcacatcg cataaaccac agaccggact
       61 gactccggaa aaacagaggc ccgcccccgg gcctccccgg attcatccgt ttccctgttc
      121 agcctgacag cacgcccccg cggccggatg acagactccg cttcggtaag caaagcggtc
      181 ttctgtgatt ccgccagttg cggcttattc attactcaac gtcaaacgcc cgaattgaag
      241 ccaaatcatc cagaccgctc agctcctctt tcatttcacg ctgacggcga taaatctcat
      301 cgttgcgatc gacctgcgcc tgcaccattg ctgccgccag ttcttccagt tccggcatcg
      361 acagtttcac ctgctgatta tcggcatcgc tccacgccat atgtgtttgt gctgtgacag
      421 attttgccag catgactacc ggggacaggc ggcccagtga gtcgggacca gcattccaga
      481 tacgaccgtt ccattcaaac gtgaacggct tcgcctcctg ttctgcgcgc catgcttcaa
      541 tttcctgacg tctggcctct ctggccgctt ccagcatttc tggtgtcaca gtgaatgggg
      601 ctatctcacc ccatttgccg ctttgcagtt cctgccagat ttgctgaccc gtcggagcga
      661 catcatcagc ggtggctgtg taggggactg cctggtccct gtcgtcaaaa aaaacgtcac
      721 agtctactgc gccactttcg gtataacggg gattaatgat ttttttaatt tccacggtgc
      781 attcctcacg atgtgcgaat aaaaagcccg ggcattgcgc cagagacatg tacatccggc
      841 cccccggaca gggcgcaata tgaccccggt aatgaatgct ctgaacatcc cgtaatgaaa
      901 aattgtgggg atgctatata cgttccggtg ggagtactgg gcactgaaat ccccaccggt
      961 cccagtcgtg agcctctgta tgactgcccc ctgacaagtc tgatgacttt atcaccgtca
     1021 gcttctccct ggtacgcagc aataatcagc ccgccaatgt cagggtctcc ccatctgttg
     1081 cggacagagc tcgccacgat tctgtaaata atatcttctg tggttatatt tattttcacc
     1141 cagccagtca gtctggatat gggccagtag cagtagcggg tgtgataaat ggggccgtta
     1201 atgccgtaaa aagtaaggga tttggctctg taccgcggtt ctgttgtctc agggcgtgca
     1261 tcagtccacc ggatgctgag caccccttca aaccgtgtgt cgggtatgat gatgtcgtag
     1321 gggccagcaa cggaatattc acctggcagc gcattcctta cccaggccag gaaatcactc
     1381 ttagtgtcaa aacggataac atcttcaggc agaaaagcac acccaaagcc gaatgcgccg
     1441 ggtatcgcca gacggccttt tgtccggtcg taaatgtcgc tctgtgcttc catcgtggcc
     1501 gcacttttca gccccagatt atcccgggac ttctgttgtg ccttttcgcc tgctgctgcg
     1561 atttctgaca gatggttagc cattttcaga gtgccggtca gcgcagcatc aatgtcattt
     1621 ttggcctgtt ctgctgcgcg ggcataacct gcggcatcct gtgcgctctg tccggctgcg
     1681 gctgcatttg ctcctgtgct tgtcacatct tccgcagtgg cctttctgtc ctcagctgtg
     1741 acggttgcat cctgtctggc attctccgca aaacgttgtg catcatcacg ggccgttgcg
     1801 gctgccgcca catcctgcgc cgtctgctgt gcgtttccgg ctgcggcccc ggcgctctgc
     1861 tgcgcctgca ccaccatttc ctcaaagcgc ttcatcacct ccggacgtaa atcaccatcc
     1921 tttggtgcat tcagaaacgc gttcagtgtc cccggtgcat cagtcggtgc cacatcaata
     1981 tccccgacac gggttggctg ccagccgtta cagtgaagcg caacctcgta ataccccggc
     2041 tcagcctcaa tcacataagc accgttattg tccgtcacgc aagtggcaac aacgtgtgcc
     2101 acaacggtcg gactggttct tctggcccgc agttcaatcg cacaatttac gacaggttta
     2161 cccgccccat ctttcagtac acctgaaatc tttactgcca tattcacccc acaaaaagcc
     2221 cgcctgaacc agcgggctgt cataacactg tgttacctgg ctaatcagaa cttataaccg
     2281 acacccacga tgaaaccgtc agtgcgccag tcgccactgc cggaaccttc ataagcaagg
     2341 tcaatggcca cggattcggt cgggttaaac tgcacgccag ccccccacgc cagagacgtg
     2401 ttgctgtggc ggttgtcatc actcccggtc agcacatcgt gcgttttccc cttgttgtca
     2461 gttacgcgga gataatcccc ggagaaggtc gacacacggc tgtaagccac gcccgccatc
     2521 gcatacgcgc tgaaccattc attcacgcgc acagacggcc ccgccatcac gctgaaccag
     2581 cggttacgca cggaatcctc atgccagcgg gtatcgctgt aatgcgtttt ttgctcatct
     2641 tcagcgttgg catagctgaa tgacgtcacc agccccaacg tgtccgtaaa ctcataacgg
     2701 tatttcacgt taatgccctt caggtcatcg ctgcctggca tatcagtatg gggctgaaga
     2761 tacccggcgc tcagcgtgga ctgatgttca gacgcccatg caggcgcacc ggatacagcc
     2821 agacagatgg ctgcggacaa aatggctgca caaactttac gcataattac ctctcgcttt
     2881 tctgcaataa aaaaggcacc atttctggtg cccgtatctg ggttataaaa ttcagctaat
     2941 cgtgatgcct gcagtggctt tcttcatcac aacaaccagc aaatcgctga tacttgctgt
     3001 gggataccag ccatttacca gccatgccga tacagaaaac tccagcgtca tgtgaccgtg
     3061 accggcaggc atatcaataa cacccgtata tatcagcgta ttatccaggg tcgttcggtt
     3121 ataaatttca gcaccgtttt tcttcactat caggctgcat gacgaataaa tattgttatt
     3181 cttccgctca tgtttagcac cgcgaaacgc caccgcggga ataacaattt gccgatcaaa
     3241 cggctgatcg tcataaaccc tgacggtaat ggtccctgat ggccacctct ccggtgcccg
     3301 ggagtcccgt gggaaaggtt tgcccactgt tttaacgaga tcgccttcaa tctggttcgc
     3361 ggacaatttt cccagaaccc gacagttctt attaatcgtg acgttgttga gcgtcccgga
     3421 gttcgcgttc acgttaccgc tgatatcggc atttttcgcc gtcagccgtc cgccaggtgt
     3481 cagggaaaat gccggaggat taccgccgct ggtaatggtc ggagccgtca ggcgtttcag
     3541 gaacacgtcg ttcatgaata tctgatcgcc ctgaccaaca aacatcggct ttgtgttgcc
     3601 attcgcagga ttaatcatcg caatcctgtc tgccgccagc agcacctgac tctgcattcc
     3661 tgctggcgta ttctcaatac cggcaccgat acccgcaata taaaggcgtc cgtccttcat
     3721 ctgttgcagc ttcacagccc acatgctgtt caggttatta tttgtatcaa cctgaacttt
     3781 ctgtatctgc tggattgcag cactctgatt ttccagtttt ttattgacgg tttgcgtgat
     3841 ttcattgctg acattcgtaa tggacgtcct gatttcagtc aggtccggcg caagctgacc
     3901 gttatcaatc tgcgtccaca actccttgcc gagatgcgtg ttattgatca accctttata
     3961 aaaactcaga taaccttccg catcatcgct cgcccgaccg acggcctcca caaatgccga
     4021 tttgccaacg gtgttcacac tgcgaacgta aaaataataa tcatggcccg gcctgatatt
     4081 gatactggcg gctatccagt acagcgccgt gccaagatag cgggcgctgg tttcaacctg
     4141 cctgatatcc gcaatccgct tttccgaaaa ccagaactca aactgcaccg tcgggtcgta
     4201 tacagccagt ttcgggaccg ccgttatctg aaaatacccc ggtatcagtt caatagtgac
     4261 aggcgctgcc ggtgccgcaa tccggaacga taccgacgcc ggatcgccct gctgcccccg
     4321 ggcatttacc gcccggactg tcagactgta attccccagc gccagctgcc tgaagcggta
     4381 tgtggtttcc gtcgtcctgg ctgtgctgac cagccgctca ctgccgtcgt ccgctgccac
     4441 ggtcaggcga agcaggaagc tcacaccctt caccaccttc ggcgtgtccc atcgcgccag
     4501 cacctgatat tccccgctgt ctgcggtgac ttcggcggtc agatgctgca ccgctggcgg
     4561 cgtgacacca ttcaccgtgc cgcgccggtc accgtcaaag tgtgccccgt tatccacgat
     4621 ggcctctttt tccggcacat gctgcacggc ggtgatggca tacgtgccgt cgtcgttctc
     4681 acggatactc acgcagcgga acaggcgctg gcgcagcgtc ggcagcttca gcccccacac
     4741 gctgtattct gcaacgccgt caggaacccg gctcactttc accttcacgc cgtcggtgac
     4801 ggactgaacc tccacgctga ccggattgcc atttccgtca accaggctta tcagcgtggt
     4861 acaggaggac ggcagcgtga tttcacggtc gagcgtcagc gtccgggtct ggctgttcac
     4921 cgccagtacg cgaccaccgg tgctgatacc ggcataatca tcatcgcaga tttcaatgac
     4981 atcacccggt acatggcgaa gcccttctgc gccgacgctg aagtccacgg tctgcgtttc
     5041 cagcagttcc gttttaatca gccacagccc ggcgcggtgc gcctgtcccc ggctggtaca
     5101 gccaaaggca tccatcttcg tgacgttacg accgtaacgg agaatggcct gcgcgtcctc
     5161 cacaagctct gtcgccgtct catgaccgtt gtccggatca atccagttca cctcaacgac
     5221 attatggcgg tccttcaggg cgctgaagct gtagcggaac ggcgcgccat catccggcat
     5281 caccacatta ctgcggttat aggtccacac tttatccgac ggtcggtcct gcacgaacgt
     5341 cagcgtctgc ccgttccata ccggcataca gcgcatcgcc gagcagaaat cactgagaac
     5401 atcccacgcc ttacgctgtg tggtcaggta agcgttacag gtgatgcgcg gctccgtgcc
     5461 gccaaatccg tccggcactg actggtcgca gtactggccg atgacataca gcgcccattt
     5521 gtccacatct gccgcaccaa gacgtttccc catgccgtag cgcggatgag tgagcatgtc
     5581 ccaccgacac caggccatgt tgttgctgta tgctggctta agcgttccgt cccagatacc
     5641 gctgtattgc cgcgtctgcg ggttatagtt cgacggcacc tgcagaatgc gcccgcgaag
     5701 atgataattg cgactcacct gctggttacc gaactgctct gaatccacct gcacgccgac
     5761 cagcgccgtg ttcgggtagc actgtttcac atcgatgatt tcggtgtacg acgaccagag
     5821 cgttttgttc tgcagctggt ctgtggtgct gtccggtgtc atcctgcgca tccggatatt
     5881 aaacgggcgc ggcggcaggt tacccaccac caccgaggcc agatactgcg aagtggtttt
     5941 gcccttaatg gtgatgtctt tttccgtcac ccagccaccg ttacgctgta tctgaaccag
     6001 caggcggact tccgacggat tccggtcccc ctttgaggtg ttttccacca gtgcctgcac
     6061 accgaaggtc aggcgcagac gatcaatgtt tgccgacgtg atggtccggg tgatcggcgt
     6121 gtcgtatttc acttccgtac ccagcacagt ctctgagccg gaagattcaa ccccctccgg
     6181 cggtgtctgc tcctgctcgc cggcgcggaa caccaccgta acaccggaaa agtttgtctt
     6241 cccctcgctg tccaggactg gcgtaccgtt cagcagcacg ctttttaatc catccaccgg
     6301 accgtcaacc ggcccttcgc tgatggcatc aatcacactc agcaactgcg tggatttcag
     6361 gttgtccttc gcttcgcgcg gggtatgccc cttactgctg cctttaccca ttcctcacgc
     6421 tccataaacg acaaaaccgc ccgcaggcgg tttcacatga aacattttgc atcagcgacc
     6481 aatcaccaca acctgaccac catccccttc gtctgccgtg ctgatctcct gagataccac
     6541 ccgcgacccc acgcgcattt caccgtacag aacaggcaga acattgccct gggcaaccat
     6601 gttatccagt gaggagaaac aggtgttctg tttgccgtta tccgttgtct gtgtacgggg
     6661 agttctggct ttcggtgcca gcatctgtgc aacaccgcca agcgtcatac tggcaccgag
     6721 agaaaacagc agattactcg ccataattcc tacccccggc atccatatag caaccgccat
     6781 aacagctgcc cccagcaccg cctgaaacac accgccactt ttagctccca ccagacgcgg
     6841 tactatgtgg atcactgcac catttgccag cggctcatta agacgggcag acaattcggt
     6901 ttcacctgca tcacgcccgg caatgcgcac ctgataccag ccgtcactca gtttctgacg
     6961 aaacgccggg agctgtgtgg ccagtgcgcg gatggcttca gcccccgttt tcacacgaag
     7021 gtcgatgcgg cggccaaatc gttgcaaatc cccgtaaagg cagatgcgtg ccattcccgg
     7081 tgacgccaga gggagtgtgt gcgtcgctgc catttgtcgg tatacctctc tcgtttactc
     7141 agttgttcag gaatatggtg cagcagctca ccgtcgccgc agtaaatggc ggcatgattc
     7201 ggcaccgatg aaccaaaaca gcacagcagc acatcgcccg gttgtgctga tgacaacggc
     7261 acctgataca gccctgtggc ctccagatta tccagataga gattctgacc gtgacgccac
     7321 cagtcatccc cgcgatgaaa atccggcatc tcaatccccg ccagatgata agcatcccgg
     7381 aacagcgtgt aacagtccgt caccccgtgc tcaaagcgcc gcccggtgag atgcggcaca
     7441 cagcggaact tgtgaatcgc cccccggcag accagccacc acggcaaatc actctgcacc
     7501 tgcagccgcc ggtcagcctc actcagccag ggcagaccac cgggatgact gtggaccagt
     7561 gccacaatct ccccctgcat ctctgcccgc agccagtctt ccggtgcgat acgaaaatac
     7621 gcctccggct ctgcagaaat attcacacaa gggatatacc gctccccctc cggcgttctc
     7681 accacgaagc cacacgactc cgctggcgca catcgccggg cgtgcgccag aatcgctgat
     7741 tctgtctgtg tcatggattt actgagaaag tttattgatg gaaaggaaac cgccgaaatt
     7801 accggtattg ttgcgcaact cacacccgcg catacacttg ctgcatttgt ccttccggat
     7861 atccgtcgtt ggtttgtcga actcgtcagc cactgccctg cccgtgtaac cacactcatc
     7921 agaacggtag gtccacatac aggtattcgc cagcatgata cgccccggga aaaccgcgcc
     7981 atccgtctcc gttggtgtgg ccagcacaaa agaggcactg accgcgctca gttcgctgca
     8041 ctgctcgatg cgccagcggc tgatcacctc ctgctccgga tcggcgtcac tgtttccgtt
     8101 gacgaagttc accgcatcca gaaaacgggc gtaaacctta cgccggacca ccgttccgcc
     8161 gaccagactc tgcagatctt ccgccatccc ggcgaccata ccgtacaggt tagaaaccgt
     8221 cagcgtgggg cgcgtactgg tgcctttgcc attcagttca aaaccactcc ccctgaatgg
     8281 gatacggctg atactgtcgc ccctgccagg tgaccggctc acctttttcg ttctgctcat
     8341 tacagaaaaa ataacgttct ccaccgacct ctgtcaggtc gatttcccag agcaccacgc
     8401 tggccgactg ctccgcacgg gtgcattcat tcagtgtttc ctgccggata tcctgcatca
     8461 gttcaccacc tgttcaaaat cggccgttac agtcacccat aacgccccca cgcttgccga
     8521 ccatttacga caagccaccc tgatcggttt ccagtcataa ggtggcgtcc actgaaatgc
     8581 gcggacgcca ccgtgccgtt ccagaaaggc ttttaaaggt gggtgttcac ctttacgaac
     8641 acgtatcgtc acgctgtaag tcgacagcag attattcagt cccgccgggc gacgctgttc
     8701 ataaccatca cccagcttca ctgccaccac ttttggctct gataccacat tcatatccgg
     8761 gcgcaccttc cagcgaaacg tctccattac cggtatgctc cacttaaccg gccaccatca
     8821 cgggcctgct gttgcataaa gtccgcggcc gcttttttcc cgaggtcata aaccaccttc
     8881 agtgctgccg gacctatctg cccgttcgtg ccgtcgttat tgatcccgat gttgtactgc
     8941 ggggcaaaca tcaccatgcc tgaaccacca gtatccgcca caacccccag cttaccatca
     9001 gcaccgcgac gcagtggcag aatggcttca ggtcccgctt cccccatcac acccgcgcct
     9061 tttgcaaaag caaaaaacgt cggacggtta accaccgtgc cactgtagcg actcaaatca
     9121 gcagactggt aaacaccgcc atcagcatta gtcgtgaagc cgaataaaga gccgacgccc
     9181 tttaccgcct gcatcatggc catctgtgcc ataattctgg ccatatctga caacagggaa
     9241 gaggtgaagg atttaaaatt cagcttaccg gtggtacaga atgtcgccag tgcattaccg
     9301 gcactgctga atgccactgt aaacatctgt tctgccgttc ccaccgcatt atccgcatcc
     9361 gccgtaaaat tctgaaacgc ccgcatggca ccgtttttcc agtcgccctg cgccacttcc
     9421 agttcctgcc agtagcgttt gttttcattc agttgtcgct tcaggctccc cttcagcacc
     9481 tcctcagccc tccggtagtc ctccgtcccg taagtgcctt tctggcgact gtcattctca
     9541 agctgttgca actgttgccg gtattcctgc cggatgcgca actgtgcctg gtagcgctgc
     9601 cgctgcttat cccccatacc tgcagtggca atatccagat tgtgctgctc acgcagtgca
     9661 cgttctttgt ctgccagctg gctggtcagc tgaaccgttt tttttctcag gtcgttaagc
     9721 gctgtctgtt tctgcagctc ctgctgtttc acatccagca gcgtcagcgc ctgaatcagc
     9781 tcattcttac gggccagcac actcttttca tctgccgtca gctttttccc gtccaggtcg
     9841 ctgatgcgct gctgcagggc cagaagctgt ttatgcgctt cagtcatcct ttcagtggca
     9901 atgcctgctg actgtctggc agcagcaatc tgcccttcca cctgtgcctg ctgctgactg
     9961 tactgcagca ataaccgggt ggcctcatca ttacgggttg cccgtgtatt tttcttaatg
    10021 gctttttcgt aacgttcatt ttcacgctgt atcgccgcat ccctgacagc ctggtcggcg
    10081 tactgcatgg cattaatacg cgcaatttcc cgctgatgtc gtgcagcttc cgtttcattc
    10141 atccggttca gcgcggcatt ttcagcattc cggcgtttct gttgctcctg gtaattccgt
    10201 tctgcctgcg cttttgcatc ctgcaaatcc ttccggcgtt ttttctcctg aagatcgtta
    10261 agacgctgct gatcgtactc cacctgtgtg gaggcgtttg tccacggata ttttttcgcg
    10321 cgctgaattt tttcctgtaa cgcatcaatc tgcgcatcca gcgagtcttc acgaccaata
    10381 ttcatggccg catcccagaa ctgcttccac cagtcagaca aggtttgcag cgtactaccc
    10441 agcgcattga gattattatc aatatcagat gtgcgtttac cggtttcctc tgccagcgca
    10501 gacatggcga tccgggccgc atcactggac cgcccctgct ccccaaggac gcgtatctgc
    10561 tcaagctgag tggcagtcaa aaaatgcagc gcattgtcca gcgccttcgc ggcatttaca
    10621 ggatcatcct tcagccgctt aaactgattt atggtatcgc tgaccgactg gccaaccgat
    10681 cgctccatct gtgcggcagc tttcgccacc ataccaatat cgtttccatg aaatgcccca
    10741 ctgcccacca cctgtgccag cgcaccggct gccgcatgtt gcgtgatacc attcccggat
    10801 atggcccggc tgagtttcca caactgcccg acagtgacac cggcataatg tcccgtcagc
    10861 gccagctgac ggttaaattc ctcgccctcc ttccggccgt catgccaggc tttacccaga
    10921 cccaggaccg ccgcgacaag tccgccaata acgccgccag tcatcatgcc tttcggcgac
    10981 atcagtgcgc ctgtccatcc ggcacggtta gccagcgtta tcccggatcc cctcagcgca
    11041 ccaaaattgc cgcgcgccat ctgactgatt aacaccccca gctcccgccg ggctgccgca
    11101 cttttcagcc ccagcgaatg tgtggctttt cctgcccgct ccattttgcg gatatacact
    11161 tctgcagcac tgcttacccc cagctgagcc gccctggcgc gaagcaactc agaagacgac
    11221 agattctggc gggttgcctg ctctttaagc tggcggataa acgccgcttt ctgccgggtg
    11281 gcctgttcct ctgcctgcgt cagggcacgg gttttcgccg tgatctccga aatcagcgcc
    11341 agataatcct gctgaccaac cccgccactg tttctggcct gtcggatctg ctgctgaata
    11401 cgctgtaatt cctgaagccc cgcaccggcc tgtttcacac tgtcaatctg gcgataaaag
    11461 gcggcagccg ctttatcctg cgcctccgcc agtgccctgg cctgcgcctg ttcctcgcgc
    11521 attttctgat tcagggcatc cacgcgcaga cgggtttgtt ccacctcacg ggccatgcgt
    11581 tcatgagccc gtgcattctt ctccaccgtc tgcgcatggg ctgatgctgc tgttgcagcc
    11641 gaagaagccg catgcattgt ctgccgggcc gcctgagtct gacgctccat aaaacgctgc
    11701 atacgggcag aagaccgttc tgcatcaccg gctgcaccat tcagaaggtt tttgatacgg
    11761 ggaatttcat ttttaaactc tgccgcatca atccccaaat caatgaccag gttggctatc
    11821 tggtccataa cgcacacctc cggaaatacc ttccccaaga tgcatcagtt cttcgtccgt
    11881 tcgctccggt atcccgttct cttccggtaa aaggctgaaa tcagccaccg cagcatcact
    11941 gctgccggac accattctca cgatcaatgc cttcagcgag gcaaactgcg catccatcca
    12001 cacatcactg aagctctgca tccggaaata atcgccccct caccaagctc agtggccgac
    12061 atttccgaca gcatccgccg ccagtctgcc cgccggaact cccgggcaag ccgcatgaca
    12121 aactgcattt cccgcgtcag gacttttccg gcgtcagcgc ctcatgatca tcatccccgg
    12181 cattctcaat ggtccccata ccgctcagcg acagaaccct ctccgccccc gcgcccagcg
    12241 catcatacga ccatgttgtc ataatggatg cgcaaagcgt ctcaacatcc tgagactgct
    12301 cagcattcca cagtgagcgg gaaaccagcc aggcattgat atccattccc atacgcagaa
    12361 aagcaatctg tcgttcagcc tccggcagtt ctccctcctg tgcatcaaac tttgccgttc
    12421 gctgctgaac aaacgtcaga tattcaattc tctgcagccc ggacagctca ctgagcacca
    12481 cggactgttt ttcataatta aacgtatcct gtttcagaaa catcatgttc tccggatgca
    12541 aaaagccccg gataaccggg gcaatgatga gtatcgtcct gttatggtgc gctgacggtc
    12601 accgcagcca ctgccacaaa ctctccgtca gaggtcatgc ccacgatgct gacactgccc
    12661 tgcttcacgc ctttcaccgt ggccacaagc ccgctcaggg tcaccgaagc agtctgagga
    12721 tctgacgaat gcacactgat cgctttgtca ctggccccgt caggttttac tgtaaaggtc
    12781 agtgtggtgg ttgctcccgc tttgacactg acagatgccg gtgccaccgt cagtccggta
    12841 acacccacgg tttcagcgcc ctcctctgcc agatacggac gccccacacc gctgattttt
    12901 acagtacggg tcatcacctc ttttgaggta atggttttac ccagtgaact cagccagcca
    12961 cggaaaacat caaccgtacc gttggggtat ttgatacgaa acgcgcagac ttcaccggaa
    13021 tcgaacaact gaaccagttt tttctgcccg ctgtcacccg gacgccaggc cagcgtcgcc
    13081 aaagtatcac cgacggattt ctgcccctgg gttgtcgttt tccagtctgc atcttcatca
    13141 tcgagataag tgtcatcttc tgcatcagcg gtcatttcgc caggttgcag atccttcacc
    13201 atcgcaagac gcagccagtc agtgtccgac aaagggttcg caaacgcatc gcccttgccg
    13261 gtgtacatcc agaacgtcgt tcccgcacct ttcgtctttg ccagtggatt tggtgtggtc
    13321 attgccacct ccttaattcg tgtacgtgat ctggtacgtg atttccgcca tcgcccaggt
    13381 ggccatctca ttatcacgtt gatagttaaa accgagtggg atcatggtgt cgatgagtcc
    13441 ggaaagcacc ggaatatcct tcatggccgg aaatatggtg ttctccatcc acgtatccag
    13501 ctcagaatcc ggcgcctgtg cacggacgaa aacggcaata tgcagaacag cctgccagtc
    13561 gtcctcatcc gtcatttttc cggtgtactg cgcatcactc agccacaccg ccacggcggg
    13621 cagttcctgc gcatcaataa atgccggaag cccgtcaaaa agcacgacat tccccccgca
    13681 ttcgcccttc aggcttgcca gtactgcctg gcggatttgt gtgtgcctgt tcatcccaaa
    13741 tgtatcctca gttgctgttt cagggcatac cccagctgtt tcggcatttc cgcggcaatg
    13801 atgcgatcgc gggcatcctc aaatgcctgt gtcagcggtc cggccagcgg aattttcaca
    13861 acctccacgg gcagacgatt ttttctgggc cgccccttac tgtcctttcc tgtttcaaaa
    13921 cacgcttcag gaagacgcct gagaacatgc cagcgaccgt tcgccagctg ctggataaac
    13981 gcaccacgaa aaaagtattt ccccaccttc agtccgtcac cggcacgccg gcatgttgtg
    14041 ccaagcttaa tggcgggcag attgccccgg ttaacacgga tacgggcata catttttcct
    14101 gccggactgg ctttaaatac ccggacgcgc tgacgcacca gtttcagggg gccccccttc
    14161 acctggttat ctcccgcaac ggtattcctg gcgacctgcc gggtggcaac cgagacaact
    14221 tttgcagcaa cccggtttac tgcccatgcg ctggcctgcg gcaccatacg ggtatcaaga
    14281 ctgttcagat tgcggatggc attctcaagc cccctcataa tatccccctg cccttacgtt
    14341 tcctgctcct tcacgccgca accggatata actacatccg ccgtcatcag gagtaatacg
    14401 atccacgctg aaagactccc ggccaatcat cagcgaatca ttgcgacaca gctgtaaaat
//
LOCUS       DAJVUK010000104        14426 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.104, whole genome shotgun sequence.
ACCESSION   DAJVUK010000104 DAJVUK010000000
VERSION     DAJVUK010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14426
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.104"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..711)
                     /gene="fimH"
                     /locus_tag="OQQ57_002871"
     CDS             complement(<1..711)
                     /gene="fimH"
                     /locus_tag="OQQ57_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria D-mannose specific adhesin FimH"
                     /protein_id="HCS1957563.1"
                     /translation="MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVN
                     LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSS
                     YPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNS
                     DDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYL
                     SGTTADAGNSIFTNTASFS"
     gene            complement(731..1234)
                     /gene="fimG"
                     /locus_tag="OQQ57_002872"
     CDS             complement(731..1234)
                     /gene="fimG"
                     /locus_tag="OQQ57_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimG"
                     /protein_id="HCS1957564.1"
                     /translation="MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTT
                     NATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQG
                     TAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI
                     SITYTYS"
     gene            complement(1247..1777)
                     /gene="fimF"
                     /locus_tag="OQQ57_002873"
     CDS             complement(1247..1777)
                     /gene="fimF"
                     /locus_tag="OQQ57_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimF"
                     /protein_id="HCS1957565.1"
                     /translation="MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAES
                     TNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
                     LENTVSAASGLGIQLLNEQQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
                     TAGHINATATFTLEYQ"
     gene            complement(1787..4423)
                     /gene="fimD"
                     /locus_tag="OQQ57_002874"
                     /pseudo
     CDS             complement(1787..4423)
                     /gene="fimD"
                     /locus_tag="OQQ57_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher FimD"
     gene            complement(4490..5215)
                     /gene="fimC"
                     /locus_tag="OQQ57_002875"
     CDS             complement(4490..5215)
                     /gene="fimC"
                     /locus_tag="OQQ57_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HCS1957566.1"
                     /translation="MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATR
                     VIYPAGQKQVQLAVTNNDENSTYLIQSWMENADGVKDGRFIVTPPLFAMKGKKENTLR
                     ILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQFAIISRIKLYYRPAKLALPP
                     DQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAG
                     SNITYRTINDYGALTPKMTGVME"
     gene            complement(5252..5791)
                     /locus_tag="OQQ57_002876"
     CDS             complement(5252..5791)
                     /locus_tag="OQQ57_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1957567.1"
                     /translation="MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCR
                     IEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGK
                     NPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATG
                     RWVTGGIANAQAWFSLTYQ"
     gene            complement(5856..6404)
                     /gene="fimA"
                     /locus_tag="OQQ57_002877"
     CDS             complement(5856..6404)
                     /gene="fimA"
                     /locus_tag="OQQ57_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial major subunit FimA"
                     /protein_id="HCS1957568.1"
                     /translation="MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAAC
                     AVDAGSVDQIVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAID
                     AGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSEQTTLNNGTNTIPFQARY
                     YATGVATPGAANADATFKVQYQ"
     gene            complement(6881..7477)
                     /gene="fimE"
                     /locus_tag="OQQ57_002878"
     CDS             complement(6881..7477)
                     /gene="fimE"
                     /locus_tag="OQQ57_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313299.1"
                     /note="upgraded from regulatory protein to switch DNA
                     invertase; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria switch DNA invertase FimE"
                     /protein_id="HCS1957569.1"
                     /translation="MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISE
                     LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTLERANWKGADRTDAI
                     FISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL
                     GHRNIRHTVRYTASNAARFAGLWERNNLINEKLKREEV"
     gene            complement(7955..8557)
                     /gene="fimB"
                     /locus_tag="OQQ57_002879"
     CDS             complement(7955..8557)
                     /gene="fimB"
                     /locus_tag="OQQ57_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria switch DNA invertase FimB"
                     /protein_id="HCS1957570.1"
                     /translation="MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIH
                     GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTPPLLNKEVQALKNWLSIRTSYPHA
                     ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL
                     IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL"
     gene            10013..10729
                     /gene="nanC"
                     /locus_tag="OQQ57_002880"
     CDS             10013..10729
                     /gene="nanC"
                     /locus_tag="OQQ57_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313297.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminic acid outer membrane channel
                     NanC"
                     /protein_id="HCS1957571.1"
                     /translation="MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLK
                     VSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHF
                     SSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSSDMSRDNVHRWDGYVTYH
                     INSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGV
                     YNGRDNLSENSYRIGVSFKL"
     gene            10749..11855
                     /gene="nanM"
                     /locus_tag="OQQ57_002881"
     CDS             10749..11855
                     /gene="nanM"
                     /locus_tag="OQQ57_002881"
                     /EC_number="5.1.3.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate epimerase"
                     /protein_id="HCS1957572.1"
                     /translation="MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIG
                     LGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNREGLTQ
                     VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNE
                     AGKDSTAVDKINAYYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK
                     GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIF
                     AGGAGFKGSRENYQHGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW
                     NNSLLIIGGETAGGKAVTDSVLISVKDNKVTVQN"
     gene            11920..12900
                     /locus_tag="OQQ57_002882"
     CDS             11920..12900
                     /locus_tag="OQQ57_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709926.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HCS1957573.1"
                     /translation="MDAIISPDYYYVLTIAGQSNAMAYGEGLPLPAREDAPHPRIKQL
                     ARFAHTHPGGPSCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARK
                     LLSFIPDNAGVLIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRT
                     RAALAKNPQNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNIT
                     DAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPD
                     DLIMGYYGSAYRSPENWTTALRSSHFSAAARRGIISDRFVEAILQFWRGK"
     gene            complement(12908..13030)
                     /locus_tag="OQQ57_002883"
     CDS             complement(12908..13030)
                     /locus_tag="OQQ57_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCS1957574.1"
                     /translation="MISFVFLLLVCPNCHAMLHRRKPPFTPEELKALMDANKSN"
     gene            13112..13984
                     /locus_tag="OQQ57_002884"
     CDS             13112..13984
                     /locus_tag="OQQ57_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCS1957575.1"
                     /translation="MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPR
                     LFDYGSEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGFWQLHNAELCSTAGSSRQP
                     PVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ
                     QIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQHGGPCEIPNGL
                     ALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGSVERLFWDFDGKIIALPQVRKNYPY
                     EGFVEWHRNEVFRG"
     gene            14029..14208
                     /locus_tag="OQQ57_002885"
     CDS             14029..14208
                     /locus_tag="OQQ57_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001153035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957576.1"
                     /translation="MQDLAASLQLAFDSGAKRVLLPISWAMDIPTVPAELFTKFQVSF
                     YSEPVDAVYKALDVN"
BASE COUNT         4047 a         3322 c         3147 g         3910 t
ORIGIN      
        1 tgaaaacgac gcggtattgg tgaaaatcga gttgcccgca tctgcggttg tgccggagag
       61 gtaatacccc aggttttggc ttttcgcaca ataaacggta agaggaattg gcactgaacc
      121 agggtagtcc ggcagagtaa cggtgacatc acgagcagaa acatcgcagc cgccagtagg
      181 caccaccaca tcattattgg cgtaaatatt ccacacaaac tggaaatcat cgctgttata
      241 gttgttggtc tgtcgcaaaa taagcacggc aattaatgag ccagctttaa tcgccacccc
      301 gcccgcactg ctcacaggcg tcaaataaag cgccaccggc cacggcttat ccgttctcga
      361 attataaaca acccgcggcg tttcgctggt ggtcggaaat ggatagctac tgccactata
      421 ttttacggtc ccggaaaaat tagataacac gccgccataa gccgagcctc gttgcagtgt
      481 gacatagtct gtaatggttt ccggataatc gttatggcaa aagatttgcg tcgaaagatc
      541 tacgaccagg ttttgcccca cattcacgac aggcgcaagg tttacataaa cattagcgct
      601 gccaccgcca atagggatag cagtaccatt ggcggtttta caggcgaatg accaggcatt
      661 taccgaccag cccatcagca gtacagcaaa cagggtaata actcgtttca ttacaattat
      721 ctcttcgggt tcagctgtag gtataggtga tgctaatcac tgcctgaatg gttccctgag
      781 tggctccgcc atttaccgtc aatgctctga cctgtaacgg gaagtgcgct gattgtgagg
      841 aatcatccac ctgaactgtt ttggtttcgc cagtattcaa tgtgttgcca ctgtcatcct
      901 gtagctctaa ctggatgttt tgcgcggtcc cctggttttt ataatatccg gtactgtcgg
      961 ctgccccgct gaagctggca gtgaccctcg acgttcccac cggacaatta gtcaactcaa
     1021 gcgcaacatc atgccaggcc gatgccgccc cggcagacat cagactgaaa gaataaagat
     1081 cgccgagatc aaccgtggca ttggtggtgg aaactgtgca cggtttggcg acgaccttac
     1141 cgttcaccgt gatggtgaca tcggctgcct gtattgtcgc acttgcgagc gccaatattg
     1201 ccgccaataa atacccacgt ttgcgccatt tcatgagcat ctccagttac tgatattcaa
     1261 gagtgaaggt agccgtggca ttgatatgcc ccgcagtgac aggcacctgt gtcgccatta
     1321 gccgggcgta aaaattcaac gtatttggtt tacccggcgt cagggtcgtc cacgaaatcg
     1381 cggacgatgg agcattaagg ggtatctgat tttgctgctc attcagaagc tgtattccca
     1441 gtcccgaagc cgctgacacc gtattttcaa gtgcaagcag gttggcattg tggctatctg
     1501 caacgccggt aaacccaacc tttacggcag aaacggcgtt accacagggt gacagcaaaa
     1561 tacgaaatgg aacgacagga gtcgttgcgc caatgttgtt aaattgcttc gccgcgtttt
     1621 ccatcagatc aacagtaaaa ttggttgatt cagcggccac actacagccg ttatctctga
     1681 catagccgcg gatagtaatc gtgctatccg cagccaaaac gcgacttacc gccagccaca
     1741 aaaaagcgca cagaagataa aaaggtttgt ttctcatcac gcccccttaa cgacattcag
     1801 ctgatagctg ggttaataac tgctgctgac tctctggtgg cagttgataa ttggcgatac
     1861 agtgagcatt ttcctcttct ccccatttca cctgaacttt tcccgctaaa ggcattccgc
     1921 tgaggtaaac ctgaccatta tccgcaacaa tgccgctact ctggctactc tctgatgtca
     1981 ccatcgcccc aaacggcagc ggcttattat tgtgggttag cgtcatgagc agttttatcc
     2041 caacgcgcgc tttaaactct gctcgcacga tcgccccacg agtgggaaca acgttagcga
     2101 ccgcgttatc taaatcgacg ttatcagcca gggtattggt atccagcgcc actctgtttt
     2161 cccgatattc ggtggcataa ggcagcacgg cataaccgcg ccagtcggta cgcacccccg
     2221 tctggttttc gacttttgca tcttttgcgc caggcgcttt aacaagtacc accgtatcgt
     2281 ttaacggctg ccccagcgtt acgccattgg catgagccag taccccaccg ctgactccgt
     2341 aatagagctg cttaatatca tcgctatggc tgtaaccgat attggcattg ccgtaaccac
     2401 cgcgataatt cagcgtggcg tagcctgtac ttccgctatt accatcgcct cccccggcat
     2461 agccggtttg cacgctatag ctgaggttgt tgtcttccag caacgtaccg tatacaccag
     2521 ccagattggt catccgaccg ttgagatcgt gtgacacgct gtagctggca ctggcatgtc
     2581 gccactgaga tttactgtca gaacgcagcc agtggctgaa aggaatattg acgttaagcg
     2641 ctaacatctg atcccgccct ttttgccagg cgtttttcgt caggctatag ctgagcgtcc
     2701 agttgatatc ttcgaacgca gtatttaatc cagcctagaa ttgctcatcg acattactcg
     2761 ttccccaata agtttgatgg ctaccactca aatacagtgt tgatgtgcgc ccgagttgct
     2821 gagtaacggt gagctgtaat ttcccgcgtt tgttataagc gaggttgtaa tagtcggtga
     2881 atttcggctt aacctgaata actccatcct gtgtttcgat gttgtagcca ttcattcgac
     2941 tgtatgttgt atcagcgaaa ttaaaatatc cgctggtcga ataacggtaa cccactaact
     3001 gaatattcgt gcctgactca ttgagcgatt tgttatagag aaaacgcacc gattgtccgt
     3061 catgctgact gtcatcggga agtgtggaat tagcctgcgt catatccaca gacagagcgc
     3121 ccagtgcccc catgtttttc ccgataccga aattaaaagc acgataacga tccgccagtt
     3181 gcgttccacc atatattgtc cagccagccg gaaggccgtg gagtaatgta ctttggaaaa
     3241 agcggggttt ttcctgctgc gtatttccac tacggtattc tcctgccgta atggaataac
     3301 gagtatgccc ttcacgttgc aaaagcggga ctgacgaata gggtacggta aaaatctgcg
     3361 tgctgccgtc agcctctttg atcgttacct gcaagtcacc actattacct gcggcataga
     3421 tatcgttgat ggtaaaaggc cccggtggca ccgtactatt ataaatgtca tacccatttt
     3481 gtttaatagt gacctgtgca gtaccacgag caataccgtg gatcaccggg gcaaatcctc
     3541 tttggctatc gggtaacata ttgtcatctg aggccaattg tgcgccgcga aagttaatac
     3601 catcgaaaat atcgccctgg gtataaccat cacccagcgt cagccgggaa cgtaacggta
     3661 ttatgtctcg ctcaagccag gtattgatat gctgccattt atttttgcta cctgatgatc
     3721 tgtcgctact gttataactc cagctggtat tgtcgcgtaa acaccacgca ccaatattta
     3781 acccactctg taggtttaaa tatgcataat ggctgttacc cccaatctga ttctgtacac
     3841 tatttccgct gaaattataa ttgagcaatc cggcattaat accgggatcc cataactcag
     3901 gaggaatata accacgcgcg cgattactca taaatgcctg agggatcgtc aggttcagtc
     3961 gctgctgacc aacatccaga tgcgcagtag cgtcatggat cattgaggtt aatggcacgc
     4021 aggcatcatc tgccagcaga ttcataccgg agacagaagc cgcattcagc cccatactgg
     4081 caagttgcgc gcgtgtcagg cagggaacaa tcccttgttc actgtcgccc gtattaaatg
     4141 tgacatcacg cgttgccata taaccattat tcaaatagat atcgacgcga tacgtccctg
     4201 gcggtaattc ttgcccattt tcaaaacgcg ataaatcggc cacagcctgg ggatcatccg
     4261 ctaaaaagcg cggattaaaa tagagttcgg cagatgacaa aggtgcctgt gcggcaaaag
     4321 cacaggcgac aacgagccgg acaaaaaaac cagccaaacg atgcttacga atatgcaagc
     4381 attgtgtgtt tcgctggtaa agtcttaaat tcagatatga cattattcct ccggtttaaa
     4441 attacccggc agtcaattct ttttattcag gcgagaaatt ccccctgcgt tattccatta
     4501 cgcccgtcat tttgggggta agtgcgccat aatcatttat tgttcggtaa gtaatattgc
     4561 ttcctgcatc agaaggcaat ttaaccgtgc tttcgcccat tggaggcacc aatgcatttt
     4621 caagaacccg ggttccggca ttcaactctg ttaccgtcag ataatagggt gtcgggttaa
     4681 tcagcgtcag agaattcgcg ctacgacgaa atcttaattt ttctgcggcc tgatcgggtg
     4741 gcaacgctaa tttagccggg cgatagtaca gtttaatgcg gctgataatt gcgaactgta
     4801 gcgtattctc agtcaatttt gatttatcca ttgacggaat cgctttaaca ttcatccaga
     4861 ataaactttc ccggtcctgt ggcaattggt tatttgttgc atcaagaata cgcaaggtat
     4921 tctctttttt tcccttcatc gcaaacagag gaggcgtcac gataaaacga ccatccttta
     4981 caccatcggc attttccatc catgattgaa ttaaataggt actattttca tcattatttg
     5041 tcacggcaag ttgcacttgt ttttgccctg ccggataaat tacgcgagtc gcacctaagg
     5101 ccactcccgc ttcagcgcgt ccggcaacca tcattgccat gaacatcagg atacctgcca
     5161 gcaagcagaa tgttatttcc tgcgatttcc ttacattggc gtttttatta ctcactgtcc
     5221 tgttcctgtt atcacattat ctgctgaaca attactgata ggttaaagag aaccaggcct
     5281 gggcattggc gatgccgcca gtaacccaac gcccggtagc acgatatttg gcgatgaaat
     5341 gtagcgaagt agagcctgag taaagccgtt tccagtttac tggaggacga ttaatcggta
     5401 cgaggtttcc ttcatcatca aacaacgcta cgccaatatt ggtggctatc cctggcccct
     5461 ctcccacgga aagcacatcc ggatttttac catccgcgac accgtgaaac gccacaccca
     5521 cacgttcact caccaccgtg ctacattccc gtaaatgaat aacaaaaggc accggtgcgc
     5581 tatcttcccc taccgcatga aaccggttac tgctgatttg ccccatattg accgtcattt
     5641 gtttatcacc ggcttcaatc cggcaagttt ccgcaataat gacgccctga aattgcatat
     5701 ttccgccggg cagcgtagta ttccatttat ttccggccag agcaaacatt ggcagcaacg
     5761 acgctaatag aaataatctc ttccttttca tcgttatttt tatcgcacaa gggtgggcat
     5821 ccctgcccgt aatgacgtcc ctgaacctgg gtaggttatt gatactgaac cttgaaggtc
     5881 gcatccgcat tagctgcgcc aggggttgcg acaccggttg cataataacg cgcctggaac
     5941 ggaatggtgt tagtaccgtt attcagggtt gtttgctcac tgaatgtcgc accatccagc
     6001 gtcagcgcag cacccgttct gtccaggatc tgtacaccaa cgtttgttgc gctacccgca
     6061 gctgaactct gcagagccag aacgttggta tgacccgcat caatcgccgt acctaaaaag
     6121 gcaactgcgg ctttagatgc aacattggta tcgcaatcat tcagctgaat gttaaaaccg
     6181 acagcagaac tggttgctcc ttcctgtgcc agcgatgcgg tacgaacctg tcctaactga
     6241 acgatttgat caacagagcc tgcatcaact gcgcaagcgg cgttaacaac ttccccttta
     6301 aagtgaacgg tcccaccatt aaccgtcgtg gcagcggcca gagccgctgt agaactgagg
     6361 gacagagccg acagaacaac gattgccaga gttttaattt tcatgctgct ttcctttaaa
     6421 aaaactattt ctaaatcgac atgggcagtc gttctgtaca ctttgttttg tcaacgagtt
     6481 tgactgccaa cactgcacag ttttccccca aaagatgaaa catttggggc cattttgact
     6541 catagaggaa agcatcgcgc acaaactttt tcagtttatt tgttggctta atattctatt
     6601 gttatcttta tttatagatt tttatattgc atgaggtggt ttttggagag aagaatgagg
     6661 aagatgcgtc gagccacaga aacgttagct ttacatatag cggaggtgat gtgaaattaa
     6721 tttacaagag aaataattta catatcaaac agttagatga tttttgtcgt tttttaaaat
     6781 ttttatgctt gagaaaaaat acgtaactta tttatgatat ggacaatttg gccccaattg
     6841 tcttgtattt attttttaac tttattatca ataagttaat tcaaacctct tctcttttta
     6901 atttttcgtt tatgagatta tttctttccc ataatccggc aaaacgagca gcattactgg
     6961 cggtataacg tacagtatgg cgaatatttc gatgcccgag ataatcctga attaaacgag
     7021 tatctgcacc acgctccgcc agttcataac cgcaagcatg ccttaacata tgaggatgag
     7081 tctgcgttac ggttccagct tcaataccgg catcacgaat aatgcgatag gcctgctggc
     7141 gagaaagccg actcccgcgg cgagaaataa atatggcgtc ggtccggtca gcgcctttcc
     7201 agttagcacg ttccagggtc cagcgttcca cagcttcacg ctcatcaaaa cgtaacgggt
     7261 gaacggtaga aaatccgttc ttcagtcggc gaatatttat tcgaccttca ttaaggtcaa
     7321 gatcctgata atgcagatca agcagttcac taatacgcat cccatgccga tatgccaaca
     7381 gaataagaca ataatctctg gctcccgttg ccccgtaaca aaccgcctgc atcatggcct
     7441 gaacttcttt accggtaaga taacgacgtt tactcacaat agtagtactc ctaactgaga
     7501 tatatttgaa tgaataccta taggaaacct caatcggtca aaattagccc aatagataaa
     7561 aagataacca cacacgaagt gatgtggcta tcagtcaatt acattaaata tcatacaaaa
     7621 ataaaatatc actgatgtga caacatctat tttcattgat ttgattcaat ataacaatag
     7681 attgtagtag attagcttcc agttgcttaa aaaataaaga aaaaagtgcg aaaacaggag
     7741 aatttaagtg atgtgtaaat ttatgaatga ttttgtttat ttattttgaa gaacataaac
     7801 cattgtattt tgtatggata tggttaactt aatgcttatt atgataatta agaattatac
     7861 ttacaataac atcaattaat aaatggttaa tcatttttga tatatcgtaa gaataatgta
     7921 gtttttaaca ccatccctgg tatctcaact atctctataa aacagcgtga cgctgtcgtc
     7981 ctctggctct atcccagatg ccgtaaaaac gccctgcatt gctggcggta taccagacag
     8041 tatgacgaat attgcgatgc ccaagataat cctggataag tcgcgtatct attcccatat
     8101 tcgccaaagc aaaaccacac gaatggcgta acatgtgcgg atgaatctcc agtgacaacc
     8161 cggcattacc accggaagtc gagataatat ggtaaaactg ttgccgagaa agcggattcc
     8221 ccttacgcga taaaaatacc cactcgctct cagcatgcgg gtacgaagta cggatactca
     8281 accagttttt taaagcctga acttctttat tcaatagcgg gggcgttgtt gaaaagcctt
     8341 tttttaatcg atggatatat atacactttg ccttaagatc aatatccgaa atcctcaatc
     8401 gacaaatttc actcgcccgg aaaccatgaa taaaacaaag caaagtcaga caataattac
     8461 gtgctgcatg aggcccggta tttgctgctt taaggagtga ttcgatttca ctatgggtca
     8521 ggaagttcct ttttttgtta tcagccttat tcttcatcgt ttttccctta taattacaga
     8581 cgcgcactag ctgtgctggg ttagcaataa tccaacattt ttatcctgat tatgtttata
     8641 aaagcgaacg tttgcttaat aactaacgta agtggaccag ttcttctgag tgaacttaaa
     8701 tggggtagca acagttaatt ataataacgt tgccatacaa acgctatgct cttgcatgct
     8761 atgtaccttt atatatttat caatcggata cgaatctaat aatacccctc atcattaatg
     8821 caactaatct tatctatata tcatgtgata tgttctgtaa caagtaaaat cagcataaaa
     8881 aattcagcaa aatttaatat tcgttcaact agccgtctca catatgacat tattagtcaa
     8941 ctccatttgc cacaaaatgg ctatttcatg gaacgcagta atttcttagt ggctattatc
     9001 atgctaattc ttaggtccct agcgattatt cctggctgat tcgtcagctt acgccatgag
     9061 attgttacat tcctttttat cctggagata tgggggaacg caggagatga ttttttcatc
     9121 tacattcgtt ggtaaatata gctttggtca ctacgactta aaccttcctc aatcacagcc
     9181 attcgccggg cgatacggca aacaaactaa gtgaaacatc atcctgaaaa caccaacatc
     9241 aacaagcctc tccagatcga cttcagaagt gaccagttac aagccacaaa ccaggaaaca
     9301 tatttcatga tgagaattat gctcagcctg atggcgggta aacactgatt ttcaccaagc
     9361 tcactgagtt agcttgcaaa gcttcccttg tttagactcc aaataaatta tttataaaac
     9421 aaacatttaa acaaagatct ttagtttttg aagaccaccg caagtgttcg tctggcttca
     9481 catggcatct tcctcttaga aaaagatcga catattttgt gacacgaatt gcaaatctgg
     9541 ttttgttgta tggattgcgt gatttttgat ctggtataac aggtataaag gtgcaccaag
     9601 atagtcaatg agacagggca tctcgcaatc tatggcaaac atcacttcag ttctttctca
     9661 tcgggtgatg aaaacgcact tcagtctgaa aggaatatga aaatgagatc aacagacact
     9721 ctattttatg actctgggta aaatggattg agtaagtgat atagcttacg aaaattcaaa
     9781 tcaattaaac atcagaagag attttatact caggtattta atctggatct ctgtttattt
     9841 aaataatgtg aaaagagatt tttcacagga gaccttatac aaaaaaatat aaaatacagc
     9901 taccggttgc caaagacact ataagcctgg caaaaaatat tacacaacat aaatgctaat
     9961 tgtttatgcg ggctttgtat tgctttctgt atcctacaaa tgagtgaaat ttatgaaaaa
    10021 ggctaaaata ctttctggcg tattattact gtgcttttcg tccccattaa tttctcaggc
    10081 tgcgacactg gacgtacgtg gtggatatcg tagtggaagc cacgcctatg agactcgact
    10141 caaagtcagt gagggatggc aaaatggatg gtgggcaagc atggaaagta atacctggaa
    10201 taccattcat gataataaaa aggaaaatgc cgcactcaat gatgttcagg ttgaagttaa
    10261 ttacgcgatt aaacttgatg atcaatggac ggtgcgcccg ggaatgttaa cgcattttag
    10321 cagcaacggc acacgctacg gaccctacgt aaaactgtcc tgggacgcga caaaagatct
    10381 taattttggc attcgctatc gttacgactg gaaagcttac cgacaacaag acttatccag
    10441 tgatatgtct cgtgataacg ttcatcgttg ggatggatat gtcacttacc atattaatag
    10501 tgatttcacc ttcgcatggc aaacgacgct atacagcaaa cagaacgatt atcgctatgc
    10561 aaaccataag aaatgggcga cggaaaatgc atttgttcta caataccata tgacgcccga
    10621 tattacgcca tacatagaat atgactacct tgaccgtcag ggtgtttaca acggcagaga
    10681 taatttatcg gaaaacagtt atcgcattgg tgtgtcattt aaactgtagt agacaggaga
    10741 cagtcacaat gaataaaaca ataacggcgc ttgctatcat gatggcttca tttgccgcaa
    10801 acgcgtctgt attaccggaa actcctgtgc catttaaaag tggtaccgga gcaattgata
    10861 acgacactgt ctacattggt ttaggtagcg caggtacggc atggtacaag ctggatacac
    10921 aggccaaaga taaaaaatgg acagcgttag ctgcattccc tggtggacca agagatcaag
    10981 caacctctgc atttattgat ggcaatctgt atgtgtttgg cggcattggc aaaaacagag
    11041 agggcttgac tcaggtattt aatgacgtac acaaatacaa ccccaaaacc aatagctggg
    11101 ttaaattgat gtcgcacgca ccgatgggca tggcgggtca tgtgactttt gtacacaacg
    11161 gcaaggctta tgttactggc ggtgttaacc agaatatctt caatggctat tttgaagatc
    11221 tcaacgaggc tggaaaagat tcaaccgctg tagataaaat caatgcctac tattttgaca
    11281 aaaaagcaga agattatttc ttcaataagt ttctgttgtc ttttgatccc tcaacacagc
    11341 aatggagtta cgctggcgaa tcgccctggt acggaacggc tggtgcggcg gttgtgaata
    11401 aaggtgataa aacctggctt attaatggcg aagccaaacc cggattgcga acggatgccg
    11461 tatttgaact tgatttcacc ggtaataatt taaaatggaa taagcttgct cccgtctcat
    11521 caccagatgg cgtcgctggc ggttttgcgg ggataagcaa tgattctctt atatttgccg
    11581 gaggggccgg attcaaaggt tcacgagaaa attaccagca cggaaagaac tatgcgcatg
    11641 aaggcctgaa aaaatcatat agcactgata ttcatctttg gcataacggg aaatgggata
    11701 aatcgggtga attatcgcaa ggtcgggcct acggagtatc attgccctgg aataatagtc
    11761 tattgattat tggcggtgaa actgcaggcg gcaaagcggt gacggattca gttttgatct
    11821 ctgtgaagga taataaagtc acagtacaaa actaacgctt cagggcccca gtaaaggggc
    11881 cctgctatca atttatcatt tcaattacgc gaaaattata tggacgcaat aatatcgccc
    11941 gattattact atgttcttac cattgctggt cagtctaatg ctatggcgta tggcgaagga
    12001 ctgccattac cggccaggga agatgcgcct catcccagaa ttaaacaatt agcgagattt
    12061 gcgcatacgc atcccggagg cccgtcatgt cactttaacg acattattcc actaactcac
    12121 tgcccacacg atgttcagga tatgcagggt tatcaccatc ctctggcaac gaatcatcaa
    12181 acacagtacg gcaccgttgg ccaggcactg catattgcac ggaaattact gtcctttatt
    12241 cctgataacg caggggttct catcgttccg tgttgccgtg gcggatcggc ttttaccgcg
    12301 ggcagcgaag ggacatattc agaacggcac ggagccagcc atgatgcttg tcgttgggga
    12361 acggatactc cgctatacca ggatttagtc agcagaacgc gagccgcact ggcaaaaaat
    12421 ccgcagaaca aattcctcgg cgtatgctgg atgcaaggcg aatttgactt aatgaccagt
    12481 gactacgcgt cacaccctca acactttaat catatggttg aagcctttcg tagggatcta
    12541 aaacaatacc attctcagct taataatatt actgacgcgc cgtggttttg cggcgatacc
    12601 acctggtact ggaaagaaaa tttccctcat gcgtatgaag ctatttatgg caattatcaa
    12661 aataatgttt tagctaatat tattttcgtc gacttccagc aacaaggtga aagaggactg
    12721 acgaacgcgc ctgatgaaga cccggacgat ttaatcatgg gatattacgg ttcagcgtac
    12781 cgctcaccgg agaactggac gacggcactg cgaagcagtc atttcagcgc ggcagcccgt
    12841 cgggggatta tttctgacag gtttgtagaa gcaattttgc agttttggcg cggaaagtga
    12901 gcgttcatta atttgattta ttcgcatcca tcaacgcttt taactcctcc ggcgtaaacg
    12961 gtggtttgcg tcggtgcaac atcgcatggc aattagggca cacaagcagc aaaaaaacaa
    13021 atgagatcaa ggtaatatat cttcacttgc aggcttgaac agcagaaaat ttgcgagcat
    13081 gatcgcaatt atttcactgc tagggatatc aatggcttcc agtaaatcgc tacagcaggc
    13141 aattgccaat ataaaaatct ggcataaggg tgaacagcgc gcaccgcata aaccattgtt
    13201 attgctatac gtattagcgg gatacctgaa tggacatcca cgccttttcg attatggatc
    13261 ggaaatctac gaacctctgc acagtttact ggaacgtttt gggccacagc gttcacagta
    13321 ccgacctgat atgccgttct ggcgattaca aggcgacgga ttctggcaat tacacaatgc
    13381 cgagctttgc tcaacagcag ggagcagccg acaaccgcca gtgaaggaac tgaacgaata
    13441 ccacgttgca ggcggtttcg atgaacagca ctacgccctg gtaaccggca ataaaaaact
    13501 catcaatact ctagcgcaac agatactcga agcgcacttc accgagagta ttcaggaaga
    13561 aattgctgac gagctgggtt ttgatctcca gcaaatccgt aaacagcgcg acccgttatt
    13621 tcgcaaaaat gtattacgcg cttataacta ccagtgcgcg atatgtggct ttaatatgcg
    13681 ccacgacgac accaccgtcg cgctggaagc ggcgcatata aaatggaaac agcacggcgg
    13741 tccttgtgaa attcctaatg gcctggcgct ttgcgcaatt caccataaag cctttgataa
    13801 aggatcgatt ggcctggacg aaaatatgcg ggtactggta tcagatgcag taaacggcgg
    13861 agggagcgtt gagagattat tctgggattt tgacgggaaa attattgcgt tgccgcaggt
    13921 gcgtaaaaat tacccttatg aggggtttgt ggagtggcat cggaatgagg tttttagggg
    13981 gtgaggttga taactatcgc agtatgttca atattgctga cataatcagt gcaggatctt
    14041 gccgctagtt tacaactcgc cttcgatagc ggcgcaaaac gagttctgtt gccgatatcc
    14101 tgggctatgg atattccaac agttccggca gagttgttta ccaagtttca ggtaagtttt
    14161 tactcagaac cggttgatgc ggtttataag gcgctggatg tgaattaaca cattcctcag
    14221 cttatttaca aaaggattat tcccatttga tataatatca gtgccaattt acttttttca
    14281 atggaatata tctcggctaa ataacaataa aacttatcgc taatggatta aataaacaat
    14341 tttctaattc atttcacggt aatgactcca acttactgat agtgttttat gttcagataa
    14401 tgcccgatga ccttgtcatg cagctc
//
LOCUS       DAJVUK010000105        14306 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.105, whole genome shotgun sequence.
ACCESSION   DAJVUK010000105 DAJVUK010000000
VERSION     DAJVUK010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14306
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.105"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..581)
                     /locus_tag="OQQ57_002886"
     CDS             complement(<1..581)
                     /locus_tag="OQQ57_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HCS1957577.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
                     DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
                     CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVT"
     gene            complement(969..1715)
                     /gene="cutC"
                     /locus_tag="OQQ57_002887"
     CDS             complement(969..1715)
                     /gene="cutC"
                     /locus_tag="OQQ57_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HCS1957578.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQWVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANPLNTLSNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DAHADEYSRYVVDGAAVAEMKGIIERHQAK"
     gene            complement(1729..2295)
                     /locus_tag="OQQ57_002888"
     CDS             complement(1729..2295)
                     /locus_tag="OQQ57_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707763.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCS1957579.1"
                     /translation="MANWQSIDELQDIASDLPRFTHVLDELSRRLGLDITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEYERLPNP
                     TLAVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            2511..4244
                     /gene="argS"
                     /locus_tag="OQQ57_002889"
     CDS             2511..4244
                     /gene="argS"
                     /locus_tag="OQQ57_002889"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HCS1957580.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWHKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            4421..4909
                     /locus_tag="OQQ57_002890"
     CDS             4421..4909
                     /locus_tag="OQQ57_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HCS1957581.1"
                     /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT
                     DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDIEQLNLLKKSQRAWL
                     DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT
                     RG"
     gene            complement(5029..5421)
                     /gene="flhe"
                     /locus_tag="OQQ57_002891"
     CDS             complement(5029..5421)
                     /gene="flhe"
                     /locus_tag="OQQ57_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HCS1957582.1"
                     /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
                     TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
                     RFIWEVPGGGRLIPPLKVQRNEVIVNYR"
     gene            complement(5421..7499)
                     /gene="flhA"
                     /locus_tag="OQQ57_002892"
     CDS             complement(5421..7499)
                     /gene="flhA"
                     /locus_tag="OQQ57_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HCS1957583.1"
                     /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGCEQKA
                     PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE
                     AQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAP
                     IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
                     IRMTATIGGK"
     gene            complement(7492..8595)
                     /gene="flhB"
                     /locus_tag="OQQ57_002893"
                     /pseudo
     CDS             complement(7492..8595)
                     /gene="flhB"
                     /locus_tag="OQQ57_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
     gene            complement(8678..9322)
                     /gene="cheZ"
                     /locus_tag="OQQ57_002894"
     CDS             complement(8678..9322)
                     /gene="cheZ"
                     /locus_tag="OQQ57_002894"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HCS1957584.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
     gene            complement(9333..9722)
                     /gene="cheY"
                     /locus_tag="OQQ57_002895"
     CDS             complement(9333..9722)
                     /gene="cheY"
                     /locus_tag="OQQ57_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HCS1957585.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFDKLDM"
     gene            complement(9737..10675)
                     /locus_tag="OQQ57_002896"
     CDS             complement(9737..10675)
                     /locus_tag="OQQ57_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HCS1957586.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAPGDRHMELARSGANYQIKIHDGPVGMLAMRQAGAWTLAQNEASCVVFG
                     MPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI"
     gene            complement(10678..11490)
                     /gene="cheR"
                     /locus_tag="OQQ57_002897"
     CDS             complement(10678..11490)
                     /gene="cheR"
                     /locus_tag="OQQ57_002897"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005063150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HCS1957587.1"
                     /translation="MRLPGCSRYSFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRS
                     LGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYR
                     VWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNL
                     TPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMI
                     YFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD"
     gene            complement(11628..12194)
                     /gene="flhC"
                     /locus_tag="OQQ57_002898"
     CDS             complement(11628..12194)
                     /gene="flhC"
                     /locus_tag="OQQ57_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HCS1957588.1"
                     /translation="MSEKSIVQEARDIELITLGARLQMLESETQLSRGRLIKLYKELR
                     GSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQC
                     PQAEEGPLLALTRAWTLGRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPS
                     RAVKRRKLSQNPADIIPQLLDEQRVQAV"
     gene            complement(12197..12547)
                     /gene="flhD"
                     /locus_tag="OQQ57_002899"
     CDS             complement(12197..12547)
                     /gene="flhD"
                     /locus_tag="OQQ57_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HCS1957589.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT
                     TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVNDLQQIHTGIMLSTRLLN
                     DVNQPEEALRKKRA"
     gene            13326..13754
                     /gene="uspC"
                     /locus_tag="OQQ57_002900"
     CDS             13326..13754
                     /gene="uspC"
                     /locus_tag="OQQ57_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HCS1957590.1"
                     /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE
                     MYNQLAAPMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHH
                     FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD"
     gene            complement(13761..>14306)
                     /locus_tag="OQQ57_002901"
     CDS             complement(13761..>14306)
                     /locus_tag="OQQ57_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HCS1957591.1"
                     /translation="TQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLN
                     QHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL
                     TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQ
                     IVPRSAESQQRDKVATFPKLA"
BASE COUNT         3675 a         3781 c         3338 g         3512 t
ORIGIN      
        1 gtcactgaag tagcggcctg actttccagc tcatgcgccg cgttgtcatc catttttatt
       61 tctggcggaa aatgggcaat gcctttatga caatcgatac aggtttcgcc gcccttttgt
      121 gctttgttat gcattttctg cgcagattca ctttgcgagg caatatccat ggcatcaaaa
      181 gaatggcaac tacggcacgt tgcagagtca gttgctttta attctttcca tactgtttcg
      241 gccatttcct ggcgatgagt ttcgaactta tcgtcactgt ctattttgcc gctaacaaat
      301 tcatgataaa tatctttaga tgcttttaat ttagcaaata aataatccat ccctgacttt
      361 ggaatatggc aatctgcaca ttccgcacgt atccctttct ggttcgaaaa gtggacagtt
      421 ccctgatatt cctcaaaagg tttactcatc gagtggcagg aaaggcaaaa tgctgtatcc
      481 gacgttttat gtaaggcttt ttgcgccagc aataacccgc cgccaccaac cacaaccgct
      541 atcagcaaaa acaataaccc aatgcgtttt ttccctcgca tagattcctc taaataaatt
      601 ccagaacacc gaaatcattg gataattaaa tacacaacga attaaccgct tgcataactc
      661 ggcacaacac tgcctgaaat aatcgataaa gaatatgatt tattacaatg taatcattaa
      721 ttgctaagga ataaccctgt tgttatttag aatatatatt tgtcagtttt agcaatttaa
      781 accccataat taatgtgaat atataaaata tttttagcac aacgctatgt tcactgtcac
      841 ccgctcaaca gatcacggtt atcgtacgtt ttttatactg ctcagggata aaaaaaggcc
      901 cctgtcgaaa ttgcaggggc ctggtacgag caagcatcat attgggcgac atgatgcaac
      961 ggtaaaaatc atttggcctg atggcgttca atgattcctt tcatttcagc aaccgccgcc
     1021 ccgtctacga cataacgcga atactcgtcc gcgtgtgcat ctgatgacat ggacaatcct
     1081 tgattacgat aacgcatcgg tgaagcttgc cacgctcccg cggagctatg gacttccagc
     1141 actccggcat cgaggaagtg gtgcaggttt tctgcacgga ctcctgctcc ggccataatg
     1201 attggagcat cacgatgggc aataagttcc ataatttttg ataaaccttg cagtgcatct
     1261 gatttttgcc ctgatgtcag cacccgggcg atgcccaatt ccgcaagatt actgagtgta
     1321 tttaaagggt tagcgcacat atcgaaggcg cgatgaaaag tcactgccag cggaccggca
     1381 gcagccatta ttttttccat tcgtggcata tcgacattcc cgtcaacatc gagcacgccc
     1441 gtcaccagtc caggaaaacc taattcgcgg actgtgcgca catcctcaag aatggcggca
     1501 aactcaccgt cgctgtagca aaaatcacca ccgcgtgggc ggataatcgg atgcacaggg
     1561 atcgtcaccc actggcgcac ggatttcagt acacccaacg acggcgttaa gcccccctct
     1621 tttggggctg cgcataattc aactctgtct gcgccgtttt gctgcgccgt tagtgcacat
     1681 tccatgctgt aacagcaaat ttccagtaat gccattttta ctccttaatt acgccgactg
     1741 ctcgctggca acgatctctt caatggacca cggatgaaac ttaatagttg ttttgccatc
     1801 ggtgaccgcc agcgtcggat tcggtaatcg ctcatactca ccttttggcg aactggtttt
     1861 cactgagatc cccggtaggc tgagtccttc atcagaaagc aatgccagcg cacgggcatt
     1921 cagcgtttct ggatcacccg gcagaacgat ttcaatatgt tcccaacctt cgtgtgggta
     1981 acgtttttcc ccgggccacg gtagctccac aatggaaaac tgccagtgcg caacctgtac
     2041 cggttcatgc aatttaaaca gacaaatcgg tctgccattg atcatatttt ctgacaaaag
     2101 ctcgccacac tgttcaaaac cgcgacgcca gcgctcagcg gtgacgtttt gatggcaacg
     2161 caaagaaatg tgatcggcag tcagcggagt gatatccaac cccagacggc gggagagttc
     2221 atctaatacg tgggtaaatc gcggtaaatc cgatgcaata tcctgcagct cgtcgataga
     2281 ttgccagttc gccataatca ctcttcgtct ttcagtaaaa gcgttaattt accctgttgc
     2341 cctgcgccaa ccaaccgctg atttcacgcc gcttctgatg caatagtgaa aacggcaata
     2401 cgccacgcgc acgttgctga cgaaaacagc catttgcagt atactcccgc cctaatttct
     2461 ttaactggtg cgggcaattt ttgctcgctt catcaatgta aggtattccg gtgaatattc
     2521 aggctcttct ctcagaaaaa gtccgtcagg ccatgattgc ggcaggcgcg cctgcggatt
     2581 gcgaaccgca ggttcgtcag tcagcaaaag ttcagttcgg cgactatcag gctaacggca
     2641 tgatggcagt tgctaaaaaa ctgggtatgg caccgcgaca attagcagag caggtgctga
     2701 ctcatctgga tcttaacggt atcgccagca aagttgagat cgccggtcca ggctttatca
     2761 acattttcct tgatccggca ttcctggctg aacatgttca gcaggcgctg gcgtccgatc
     2821 gtctcggtgt ttctacgcca gaaaaacaga ccattgtggt tgactactct gcgccaaacg
     2881 tggcgaaaga gatgcatgtc ggtcacctgc gctctaccat tattggtgac gcagcagtgc
     2941 gtactctgga gttcctcggt cacaaagtga ttcgcgcaaa ccacgtcggc gactggggca
     3001 ctcagttcgg tatgctgatt gcatggctgg aaaagcagca gcaggaaaac gccggtgaaa
     3061 tggagctggc tgaccttgaa ggtttctacc gcgatgcgaa aaagcattac gacgaagatg
     3121 aagagtttgc cgagcgtgca cgtaactacg tggtaaaact gcaaagcggt gacgaatatt
     3181 tccgcgagat gtggcacaaa ctggtcgaca tcaccatgac gcagaaccag atcacctacg
     3241 atcgtctcaa cgtgacgctg acccgtgatg acgtgatggg cgaaagcctc tacaacccaa
     3301 tgctgccagg aattgtggcg gatctcaaag ccaaaggtct ggcagtagaa agcgaagggg
     3361 cgaccgtcgt attccttgat gagtttaaaa acaaggaagg cgaaccgatg ggcgtgatca
     3421 ttcagaagaa agatggcggc tatctctaca ccaccactga tatcgcctgt gcgaaatatc
     3481 gttatgaaac actgcatgcc gatcgcgtgc tgtattacat cgactcccgt cagcatcaac
     3541 acctgatgca ggcatgggcg atcgtccgta aagcaggcta tgtaccggaa tccgtaccgc
     3601 tggaacacca catgttcggc atgatgctgg gtaaagacgg caaaccgttc aaaacccgcg
     3661 cgggtggtac agtgaaactg gccgatctgc tggatgaagc cttggaacgt gcacgccgtc
     3721 tggtggcaga aaagaacccg gatatgccag ctgacgagct ggaaaaactg gctaacgcgg
     3781 ttggtattgg agcggtgaaa tatgcggatc tctccaaaaa ccgcaccacg gactacatct
     3841 tcgactggga caacatgctg gcgtttgagg gtaataccgc gccatacatg cagtatgctt
     3901 acacgcgtgt attgtccgtg ttccgtaagg cagaaattaa cgaagagcaa ctggctgcag
     3961 ctccggtaat catccgtgaa gatcgtgaag cgcaactggc agctcgcctg ctgcagtttg
     4021 aagaaaccct caccgtggtt gcccgtgaag gcacgccgca tgtgatgtgt gcttacctgt
     4081 acgatctggc tggtctgttc tctggcttct acgagcactg cccgatcctc agcgcagaaa
     4141 acgaagaagt gcgtaacagc cgtctgaaac tggcacaact gacagcgaag acgctaaagc
     4201 tgggtctgga tacgctgggt attgagacag tagagcgtat gtaatcgatt tttcgtgaga
     4261 gtaaagcctg atcagggtta cctgatcagg cttttttatt gccatctaaa tgtattctga
     4321 aaatggacat gccattgttt tctgactgtt ggataagagg ccagaagcgt aatatccggc
     4381 cccagggaaa cgataacggt tgaatttaag gaataccgca gtgtttaaat ttcttgtatt
     4441 aacattaggc attatctctt gccaggctta cgcagaagat acggttatag taaacgacca
     4501 tgacatttca gccatcaaag attgttggca aaaaaattca gatgatgata ctgacattaa
     4561 cgtgatcaaa tcatgcctgc gacaagaata caatctcgtc gatgcgcaat taaataaagc
     4621 ctatggtgaa gcttatcgtt atatagaaca agtgccacgc acaggtgtaa aaaaacctga
     4681 tatcgaacaa cttaacttgc ttaaaaaatc acagcgagcc tggctggatt ttagggacaa
     4741 agaatgtgaa ttaatccttt caaatgagga cgttcaggat ttaagtgacc cttattctga
     4801 atcagaatgg ctctcatgta tgatcataca gaccaatacg cgaactcgcc agttgcagct
     4861 ataccgtaac tctgaagatt tttatccaag ccctttgaca agaggataat tcacatcttt
     4921 ttggcatgtt ttgttgcaag ctattcctga taaataattg caacaagaca tcgagccttt
     4981 ttcactgagt tattaaacat actcgcgagc gcgtaatttt tttgtccttc agcgataatt
     5041 cacaatcact tcattacgtt gtacctttag cggtggaatt aaccgcccac cgcctggcac
     5101 ttcccagata aatcgcaacg gttctgctgc cgctataccg gaaaaggcca cggtggttcc
     5161 gctctgcccc tctaattcga cacaacgaga ttgcgaacac aagcgaaccc gcagtcctga
     5221 aggtgtcggg ccgataagct gataacgcca cgctaccagc gtcatcaatc ctgaagcagg
     5281 ttgtcgcgta gaaagaggcg cagacgacat cgactcaccg cgatgattta gcgtaattcc
     5341 tacactactt gcctgccaca tcccctcccc ggcggcttgc accagcagcg gaaacaataa
     5401 tattgctaat aaggttctca ttatttgccg ccaattgtcg ccgtcatgcg gatatgtcgg
     5461 ttatcagaca gttccagatt cgacaggacc actaactgcg gcaagctgcg gcgcaggaag
     5521 cgagacaata atggtcgcag cgcgtggttc accaacaata ctggcggcgc acccagcatc
     5581 tcctgacggg atagcgcttc ctgagtttgc gccagtaaac gatccgccag ccctggctcc
     5641 agtcctcccc cgccctgcag cgcctgtagt aacaaacgtt ccagcggtgt atcgaggcca
     5701 ataacatgga cttcatcttt gccaggaaac cactgctggg taatcgcccg tcccaacgcc
     5761 acgcgcacga cggcggttaa ttcatgtgga tcgctttgga tgggcgcatg ttccgccagc
     5821 gtttcgagaa tggtgcgcat atcgcgaatc ggtacttttt catcgaggag attttgcagc
     5881 actttatgca gtgtggtgag cgtgacgacg ccaggaacga gatcttccgt cagctttggc
     5941 atctcctggg cgacgcgatc caacagctgt tgcgcctcct gacgaccaaa cagctctgcg
     6001 gcatgctggc taatgaggtg gttaagatgc gttgctacca ccgtgctggc ctcaaccact
     6061 gtgtacccct gaatctgcgc ctgttctttt agcgcacttt caatccagat agcattcagg
     6121 ccaaatgccg gatcgacggt cgcctcacca ggtaacgtcc cggcagcggt tccagggtta
     6181 atcgccaacc agcgccccgg ataagcatca ccactgccaa tctccacgcc tttcatcaaa
     6241 atgcgatagc gggcaggttg cagatccata ttgtcgcgaa tgtgcaccac tggcggcaga
     6301 aatcccatct cctgggcaaa tttcttgcgg atactgcgta tacggcccaa caactcacca
     6361 tcctgctgga aatcgaccat cgggatcagt cgataaccca cttccattcc cagagaatct
     6421 tccagttgta catcgttcca cgtcgcttcg acaacggtat tattctctgc catttttacc
     6481 ggtttgggtt cggcaggcgc tttttgttcg catccgcgta tccaccaggc cagccccagc
     6541 aatccggcag tgaacagcaa aaataccagg ttcggcattc caggcaccaa gccgagtaaa
     6601 ccgagcacgg cggcgcttaa caacataacg cttgggttac tgaaaagctg attcaccatc
     6661 tgctcgccaa catcctgatc ggtgctgaca cgcgtaacga tgacccccgc ggcggtagaa
     6721 atcaccagcg ccggaatttg tgccaccaga ccgtcgccaa tggtcaatag cgtataactt
     6781 tccgccgcgt gtcccatgct catgccatgt tgcagcacgc cgaccagcaa cccgccgaca
     6841 acgttaatga ccatgatgag gatcccggcg atggcatcgc cgcgaacaaa cttacttgcc
     6901 ccgtccattg agccgtaaaa atcggcttcc tgagtcactt cggagcggcg ttttttcgcc
     6961 tcatcttcac caatcaatcc agcgttaagg tcggcgtcaa tcgccatctg cttacccggc
     7021 ataccatcga gaacaaagcg cgcacccact tctgcgatac gcccggcacc tttggtaatg
     7081 accataaagt tgatgatcac gagaatgaca aacaccacga tacctatagc gaaattgcca
     7141 ccaacgagga agtgaccgaa cgcttcgacc accttccctg ccgccgccgc gccggtatgc
     7201 ccttccatca aaatgatacg ggttgaagcc acgttaagtg ccagacgcaa caacgtagta
     7261 aacaacagaa tggtcggaaa cgcagcaaac tcaagcgtgc gctgggtaaa catcgccacc
     7321 agcaacacca tgatcgacaa ggcaatattg aaggtaaaca acaggtcgag tatgaatgcg
     7381 ggcagtggca gcaccatcat cgacaagatc aacaggatca aaatcggtcc ggcaaggatc
     7441 tgccattgtg tcgatttcag gtttgcgggc aggcgcagca tcgcggccag attactcatg
     7501 ggtcggtttc tcgttaataa aatccagggc ttccggcacc ggaagatgag taggttgtac
     7561 agggcgctgt ccaccagcca gacgccagcg tttcagttgc cagatccagg ccagcacttc
     7621 cgccaccgcg gcgtacagtt gacccgggat ttgttgacca atctccgcat gtcgatacag
     7681 cgctcgcgcc agcggcggcg cttcaagcgt cgggacgtta ttttcagcgc caatttcacg
     7741 aatgcgcagc gcgaccagcc ctgcaccttt agcgaccact ttcggtgcgc tcattttgtt
     7801 ttcgtcatac tgcaacgcta ccgaatagtg ggtcgggtta ttgacaatga catccgcttt
     7861 cggcacatcg gccatcatcc gacgccgtgc ggcagctcgc tgcatctgac ggatccgtcc
     7921 tttaacatgg gggtcgcctt cgctttgttt gaactcatca cgaatatcct gccgcgacat
     7981 tcgcagcttt ttcaggtggc tgaagatttg gaaaaagacg tcaaatccca ccattggaat
     8041 gacaccaagc accaccagca gtgcgcatag ccctaccaaa tccatcgcat tacccatggc
     8101 ggtaatcgga gactcggcca gtaagcgcat catctgcggc cagtgatgcc agagaaaaaa
     8161 ccccgtcacg ctgccaacca agatggtttt caaaattgct ttaagcaact ccgcgccagt
     8221 ctgtgccgag aacatccgtt taatgcccgg tagcgggttg agtttggaaa acttcggctg
     8281 caaggatttt ccgctaaata ccagcccccc cagcatgacc ggagaaatga gcgctaccag
     8341 caccacgccg ctaatcagcg gtagcagcgc cagcatggct tctctgatca gcagaataat
     8401 ctgcccgagg atcagattcg ggtctttgat aatactgtga tcaaaatgca gcccagcgga
     8461 gagcatgccc gacaatcgac gggccagcga cacaccgccg aaccagataa cacacacgcc
     8521 caccagcaaa atcagcagtg aggtcagttc acgggaacgc gggatttagg gcttttgctg
     8581 ccacacatca agcatagtgt gcgtttgtcg gatgcggcgt catcgcctta tcagaccgcc
     8641 tgatatgacg tggtcacgcc acatcaggca atacaaatca aaatccaaga ctatccaaca
     8701 aatcgtccac ctgatcctga ctggctacca caccggcttt gctggtatcg acctgaggtc
     8761 cattaagcaa actctggttt tcacgttttg gacgcgactc ctgttccggg atgttttcca
     8821 acagcaccat cagcaactgg cgttcgatct cctgaatgac atccatcatc cgcttaataa
     8881 cctgcccggt gagatcctga aaatcctgcg ccatcatgat ttccagcagt tgcgcgttag
     8941 taaagctggt atgcgcgggt acatctgcca gaaattgtcg tgtatctgtt accagttcac
     9001 gggcgtcggc aaggtcaatc ggatcggcaa accagtcatc ccaacgttgg gttaacgctt
     9061 ttgctgattt ctccatttga tcctgatgcg gttgtgacgc ctcaacactg ttcagcgccc
     9121 gctccgcagc ctgggcggtc atctgcacaa catagtacaa acgatcgcgc gcatcgggga
     9181 tggcttccgc cgcttcggca atggcctgat ccagccccag ttcccgcaaa ctgtcgcgca
     9241 gcatacgcgt caggctgccg atgcgcgcaa tgatatcgcc agctgaatgc tcgtcagcag
     9301 gtttgattga tggttgcatc atagtcgcat cctcacatgt ccagtttatc aaagattttg
     9361 ttgagttttt cctccagcgt cgcggcggta aatggcttca ccacatagcc actggccccc
     9421 gcttgcgccg cagcaatgat gttctctttc ttcgcttctg cagtcaccat taacactggc
     9481 aatgccgaca tcgcgccatc cgcacgaatt gttttcagca attccaggcc atccatattg
     9541 ggcatgttcc agtcggagat aacaaatcca taaccgcctg cctgcaactt attgagagcg
     9601 tcgacgccat cttccgcttc ctcaacatta ttgaatccca gctctttcag caggttacgc
     9661 actatgcgtc gcatggtgga aaagtcatcc acaaccaaaa atttaagttc tttatccgcc
     9721 atttcacact cctgatttaa atacgtatcg cctgtccggc actaattttt gccaacattt
     9781 gctggcttac ctggctaaga tcgaccactt cgcagacacc acccatattg atggcctcgc
     9841 gcggcatgcc gaacaccacg caacttgctt cgttttgcgc aagggtccat gcccccgcct
     9901 gacgcatcgc caacattccc accgggccgt cgtgaatttt gatttgataa tttgcgccac
     9961 tacgcgccag ttccatatgc cgatcgcccg gcgcaatata ggcatgcccc ggcaagacac
    10021 gttctccgtc ttcggcttct ttaaccccga tctggcaaag cttattaagt ctgtcggcaa
    10081 aagagcgggt gaaaccgggc ggcatatgtt gggtaattaa caatgccggg ctggaaagcg
    10141 gcaacggttg cagtacgtga cgaattgcct cagttccacc cgttgaagca ccaatcgcaa
    10201 tcagtttttc agaactcaac aacggacccg ccttcagcgt tgtcggtgct gacaatggct
    10261 tatgtgctgc aaggctcgcc tttgctgccg tacgcacctt ttcagcaatc atttcgctat
    10321 acgccagcat tccttcgcga atacccagtt gcggtttggt gacaaaatct attgccccca
    10381 gctccagcgc gcgcagcgtg acttctgatc ctttgccggt caaggaagaa accatcacaa
    10441 cgggcattgg acgcaaacgc attaattttt cgaggaaatc cagtccgtcc atccgcggca
    10501 tttcaacatc cagcgtcagc acatcgggat tgaatttctt aatcaagtca cgcgcgacca
    10561 gcggatcagg cgcggtcgcc accatttcca tgtcgctatg gctgttgatg atttctgtca
    10621 tgatctggcg catcagtgcc gaatcatcga cagataacac cctgattttg ctcatcgtta
    10681 atccttactt agcgcataca ccgtctgacc acgcagcgtg aagcggcgct caaggtggct
    10741 aaagttttca gagtgacccg caaacagcaa tccgtcgggt ttaaggagcg gaacaaagcg
    10801 gcgcaaaatc tcctgctggg tattttgatc gaagtagatc atgacgttac gacagaagat
    10861 cgcatcaaac ggccccggca cggtgtactg tttcgccagt agattcagcg gggcaaaatc
    10921 aacatagttc gccagctcct gacgcacgcg taccagccct tcatgcggtc ccgtccctcg
    10981 catgaaatac cgttgcagtt gctgcggcgt caggtttttc aactcttcat ggcgataaat
    11041 accgcttctg gctttttcca gcacttcggt gtcgatatca ctggcaaaca ctttccagcg
    11101 tccgggcgcg gtgcccaatg tgtcagccag cgtcatcgca atgctgtacg gctcttcgcc
    11161 ggttgaagcc gccgcgctcc atacgcgata ctcgccagaa cggcgacgtg cgtgatccgc
    11221 gagcagaggg aaatgatgtg cctcacggaa aaatgccgtc agattcgtgg tcagcgaatt
    11281 gataaacgcc tgccactcac cgctgtgctg attagattcc agcaagttca gataatgacc
    11341 gaaatccgtc agtcccagcg aacgcaaacg acgaaccagt cggttgtaaa ccatgtcgcg
    11401 tttatgatcg gccaggacga tcccggctcg ttgatagatc aattgactta tccgccgaaa
    11461 actgtaccga gaacaaccag gtaacctaat aagataagca cgacatcatc cttccactgt
    11521 tgaccatgac aggatgttca gtcgtcaggc gttaacgcgc gattggggca aaaaaaagca
    11581 gcggtacgtc gttaccgctg ctggcatgtt gcgccacacc gtatcagtta aacagcctgt
    11641 actctctgtt catccagcag ttgtgggata atatcggcag gattctggga aagtttacgt
    11701 ctttttactg cccgggatgg cggttgacat aagctgcagg caaagctgcc aacaggctgg
    11761 tgagcgtggg taataaaatt gccgccgcag cagttgcagc tggaaagttg cagtaatcca
    11821 ctttcaacaa accgccccaa tgtccaggca cgggttaatg ccagcagtgg tccttcttct
    11881 gcttgtgggc actgttcaag gtataaacgg taggctttga tcaccgcatc gacgccatta
    11941 cacaaacctg ttttcagtaa aaactgccat gcattacaga acatcgaagc atgaacgttt
    12001 tgttcccagg tcataaacca gtcggttgag aatggcagca tgcctttcgg cggtgggctt
    12061 ccgcgcagtt ctttataaag ttttatcagg cgtccgcgac ttaactgtgt ttcgctttcc
    12121 agcatctgca aacgagcgcc cagggtgatc aattcaatat cccgcgcttc ctgaacaatg
    12181 cttttttcac tcatgatcag gcccttttct tgcgcagcgc ttcttcaggc tgattaacat
    12241 cattcagcaa gcgtgttgag agcatgatgc cggtatgaat ttgctggaga tcgttaacgc
    12301 gggaatcttg cgtcaactga gtaatcgtct ggtggctgtc aaaacggaag tgacaaacca
    12361 gttgattggt ttctgccagc ttaaccattt gcggaagagt cagtgccgct aacgttgtcg
    12421 ccatttcttc atttatgccg agacgaaaca tagcggacgc tttgtcctga acaatcaaac
    12481 gctgtgcaag tagtaaatat gacaagttga tgtcataaat gtgtttcagc aactcggagg
    12541 tatgcattat tcccacccag aataaccaac tttattttta tgcggtttca ccgcaccccg
    12601 tgatgtcgcc gggaagcccc ggtaaaaaat aattagcatt agaatagtgc gataagctgc
    12661 aataagcaga accacctttt tggtttaata tgtccttaca aatagaaatg ggtctttaca
    12721 cttatctaag atttttccta aatcgacgca actgtactcg tcactacacg cacatacaac
    12781 ggaggggggc tgcgattttc aataatgtgt gatgcagatc acacaaaaca ctcaattact
    12841 taacataaat gtataagcca tacttttgtt ttgggtgtat ttcaatctgt taaaaagttt
    12901 ttcgctacgc tagcaagcaa aaatgaaact ggaataatcg aaatgggatg ttgcgcacag
    12961 ttaaaataac tcaccgtaaa taatcatctg ctataaataa tcactttcat gcaataccag
    13021 ataagctatt tttaaacaga cacttaccgc acaacaaact aattaaatac aaagaaaggc
    13081 aacaatcaac ttaatgttaa tgaaatgttt tacatatatt aaccacttgt ttaatgcgga
    13141 gaatcagtac actattttct tataattaca tttgaaatta tatgatcacc gggagtgatt
    13201 gattaattgt ctttactaat aatcagacta atatttacct gtttgaccga gttgggattg
    13261 cgtcgtttct ccattaggag taaagcttta atgtcacctg aagttcacag aataaggaac
    13321 aggttatgag ctatagcaat attcttgtcg ctgttgcggt tacaccggaa agtcagcaac
    13381 tgctggcaaa agcggtatct atcgccaggc cagtaaaggg acacatcagt ttaattactc
    13441 tcgcttccga cccggaaatg tacaatcaat tagccgcgcc gatgcttgaa gatttacgca
    13501 gcgtgatgca agaagaaacg caaagctttc ttgataagtt aattcaggat gcggggtatc
    13561 ccgttgacaa gacgtttatt gcctacggtg agttaagcga acatattctg gaagtatgtc
    13621 acaaacatca tttcgatttg gtgatttgcg gtaatcacaa tcacagtttc ttttcgcgag
    13681 catcctgctc ggcgaaaaga gtgattgcct caagtgaggt cgatgtgctg ttagttccac
    13741 ttacgggtga ttaaccgctc ctacgcaagc tttggaaagg tagcaacttt atcgcgctgc
    13801 tggctttccg cgcttcgcgg aactatctgc tttaggtcgc taatgaagca ctcctgccag
    13861 tggttaatat cgtttttcac gataacgtcc agcatttctg catgacggga aatacgttcc
    13921 gccagcgaca tagtcaatgc acgatccagc gcagctgcaa cttcgtcacg atcgtagggg
    13981 ttaacaatta acgccgacgt taactcgttt gccgctcccg caaattgcga aagaacaaga
    14041 acgcccgggt tggctgggtc ctgagcagca acatactctt ttgctaccag gttcatcccg
    14101 tcacgcagtg gcgtcactaa gcccacgtca gagtagcgga atattttcat cagtaattta
    14161 cggtcaaaat gctgattcaa ataataaagc ggcgtccagc ctaattgccc gtatttacca
    14221 ttaattcgtc cagcttcatt ttcgagctga tgacgaatat cctgataggc ttgcacatca
    14281 ccacgcgacg ttggtgcaat ctgggt
//
LOCUS       DAJVUK010000106        14222 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.106, whole genome shotgun sequence.
ACCESSION   DAJVUK010000106 DAJVUK010000000
VERSION     DAJVUK010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14222
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.106"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            505..1329
                     /gene="gadX"
                     /locus_tag="OQQ57_002902"
     CDS             505..1329
                     /gene="gadX"
                     /locus_tag="OQQ57_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HCS1957592.1"
                     /translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
                     DKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQ
                     NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
                     LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
                     HSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL"
     gene            1697..2425
                     /gene="gadW"
                     /locus_tag="OQQ57_002903"
     CDS             1697..2425
                     /gene="gadW"
                     /locus_tag="OQQ57_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HCS1957593.1"
                     /translation="MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFC
                     SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSLGTFS"
     gene            complement(2788..5901)
                     /locus_tag="OQQ57_002904"
     CDS             complement(2788..5901)
                     /locus_tag="OQQ57_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HCS1957594.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIGAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(5926..7083)
                     /gene="mdtE"
                     /locus_tag="OQQ57_002905"
     CDS             complement(5926..7083)
                     /gene="mdtE"
                     /locus_tag="OQQ57_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HCS1957595.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            7143..7421
                     /locus_tag="OQQ57_002906"
     CDS             7143..7421
                     /locus_tag="OQQ57_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957596.1"
                     /translation="MRDLQTSGIVGLSASKVGYRHSDRHGEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(7422..7949)
                     /gene="gadE"
                     /locus_tag="OQQ57_002907"
     CDS             complement(7422..7949)
                     /gene="gadE"
                     /locus_tag="OQQ57_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HCS1957597.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITLTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
     gene            complement(8748..9320)
                     /gene="hdeD"
                     /locus_tag="OQQ57_002908"
     CDS             complement(8748..9320)
                     /gene="hdeD"
                     /locus_tag="OQQ57_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HCS1957598.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
     gene            9575..9907
                     /gene="hdeA"
                     /locus_tag="OQQ57_002909"
     CDS             9575..9907
                     /gene="hdeA"
                     /locus_tag="OQQ57_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HCS1957599.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            10023..10349
                     /gene="hdeB"
                     /locus_tag="OQQ57_002910"
     CDS             10023..10349
                     /gene="hdeB"
                     /locus_tag="OQQ57_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HCS1957600.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            10413..11060
                     /locus_tag="OQQ57_002911"
                     /pseudo
     CDS             10413..11060
                     /locus_tag="OQQ57_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
     gene            complement(11102..11632)
                     /locus_tag="OQQ57_002912"
     CDS             complement(11102..11632)
                     /locus_tag="OQQ57_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1957601.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDGMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKITLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
     gene            complement(11788..12354)
                     /gene="slp"
                     /locus_tag="OQQ57_002913"
     CDS             complement(11788..12354)
                     /gene="slp"
                     /locus_tag="OQQ57_002913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HCS1957602.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
     gene            complement(12709..13826)
                     /locus_tag="OQQ57_002914"
                     /pseudo
     CDS             complement(12709..13826)
                     /locus_tag="OQQ57_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312403.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         3947 a         3021 c         3154 g         4100 t
ORIGIN      
        1 attatgtgtc gtcgcggctt cgaaatggac tttgctgaac tgttgctgga agactacaaa
       61 gcctccctga aatatctcag cgatcacccg aaactgcagg gtattgccca gcagaacagc
      121 tttaaacaca cctgataaca taacgttgta aaaaccgaat gcccagcctt taaaaaaaca
      181 gctgggcatt cggttgctta ttaatcgcaa taatatattg gctgtctatt catcgtgttg
      241 ataagatata tgttatatga atgtttatta aatgtagcga ttgcctttaa tgtcacgaaa
      301 agggattatt tgcttgctat taatttcact gcgttcttaa acgcgttttt gtattataaa
      361 tccagtcatc ctgcccgtag aacatcacac atcatcatcc tgttctcccg cttcgtttaa
      421 atttatttat caatcaattt gacttaagag ggcggcgtgc tacattaatt aacagtaata
      481 tgtttatgta atattaagtc aactatgcaa tcattacatg ggaattgtct aattgcgtac
      541 gcaagacata aatatattct caccatggtt aatggtgaat atcgctattt taatggtggt
      601 gacctggttt ttgcggatgc aagccaaatt cgagtagata agtgtgttga aaattttgta
      661 ttagtatcaa gggatacgct ttcattattt ctgccgatgc tcaaggagga ggcattaaat
      721 cttcatgcac ataaaaaaat ttcttcatta ctcgttcatc actgtagcag agatattcct
      781 gtttttcagg aagttgcgca actatcgcag aataagaatc ttcgctatgc agaaatgcta
      841 cgtaaaagag cattaatctt tgcgttgtta tctgtttttc ttgaggatga gcactttata
      901 ccgctgcttt tgaacgtttt gcaaccgaac atgcgaacaa gagtttgtac ggttatcaat
      961 aataatatcg cccatgagtg gacactagcc cgaatcgcca gcgagctgtt gatgagtcca
     1021 agcctgttaa agaaaaaatt gcgcgaagaa gagacatcat attcacagtt gcttactgag
     1081 tgtagaatgc aacgtgcttt gcaacttatt gttatacatg gcttttcaat taagcgagtc
     1141 gcagtgtcct gtggatatca cagcgtgtcg tatttcattt acgtctttcg aaattattat
     1201 gggatgacgc ccacagagta tcaggagcga tcggcgcagg gattgccgaa ccgtgactcg
     1261 gcggcaagta ttgttgcgca aggaaatttt tacggcactg accgttctgc ggaaggaata
     1321 agattataga attttactca gacataaaaa aaacctggca taggggaccg ggaagaggat
     1381 agtctgccgt ctccagacta ataaaccgct ataacactcc ctgttggcac gggaaacttt
     1441 gtgctctcag taagttaaat ataactttta ctggaaataa gatcagccat ttttttataa
     1501 acataagcta tacgctgtgc gaaaatatat tcgtgctgca tttacttatt atcaattaac
     1561 tgttatgcaa aactactttg tggataaatt ttggtcctac caaatctggc agtttttgcg
     1621 ctaagaaaca gtctggcaac atttcattag tatactgaaa ttgaaataat cgcagtatga
     1681 aatataaggg ataatcatga ctcatgtctg ctcggtgatc ctcattcgtc gttcattcga
     1741 tatttatcat gaacagcata aaatatcgct gcataacgag agtatcgtgc tgctggagaa
     1801 aaatttggca gacgattttg cgttttgttc accggatacg cgacgactgg atatcgatga
     1861 gctgacagtt tgccattact tacaaaatat tcgtcagcta ccacgcaatt tagggttaca
     1921 tagcaaagac cgtctattaa ttaaccagtc accccccatg ccgctggtga cggcgatttt
     1981 tgatagcttc aatgaatccg gggtaaattc accgatactg agcaatatgc tctacctttc
     2041 ctgtttatcg atgttttctc ataagaaaga actgatcccc ttacttttca atagcatcag
     2101 cactgtttca ggaaaagttg aacgccttat tagctttgat atcgccaaac gttggtatct
     2161 gcgcgatatc gcggaaagaa tgtataccag cgagagtctc atcaaaaaaa agttgcagga
     2221 tgaaaatacc tgtttcagta aaatattact cgcttccagg atgtcgatgg ccagacgatt
     2281 actcgagtta cgtcaaattc ctctgcatac tattgcagaa aaatgtggct atagcagtac
     2341 gtcgtacttt ataaacacat ttcgacaata ttatggtgta acgccacatc agtttgcgca
     2401 acattcgcta ggtacctttt cctgacatat tttgcatttg aatattggtc aggatctcac
     2461 acctgcttca tgtgaaactc ttccctgatg atttctgccg ggctaccggc tagttctctt
     2521 tcgcagtttg ccaggcggta taggtatttt caggaggaaa agactcggca tgtttgggat
     2581 tattaagctg acaattcata cgattacggg aatgtgggtc agtattgtgc tgttcaaatt
     2641 gatgacgaat ggctggagtg gtttctactt tcagtgctgt gtactaagcc tggtattcct
     2701 gacggttagc tggttgttga gtggtgaatg gttagcagga aagagtaagg ctgaaccttc
     2761 acgttcaacc ttactctcat ttacacgtta cgctttttta aagcgggcaa agagatgttc
     2821 cactacaacg aaaaagaccg gaacgaagta aattgccagc actgttgcgg caaacatccc
     2881 gcccatcacg ccggtaccta ccgcgttttg cgcgccagaa ccggcaccat gactgataac
     2941 cagcggcagc acgccgagaa taaaggccag agaggtcatc aggattgggc gtaaacgcat
     3001 ccgcgccgct tcgatgattg cccctatcgg cgttttccct tctttctgca tcatctcaac
     3061 ggcaaattcg acaatcagga tggcgttctt ggcggaaagc ccgatggtgg tcagcaaacc
     3121 aacctggaag tagacgtcat tacttaagcc gcgcagatcg gtggccagta atgcgccaac
     3181 gacgcctaac ggaacaacca acatcaccga gaacggaatt gaccagctct catagagtgc
     3241 ggcgagggcg aggaacacca cgaccagtga aatggcatac agtgcaggag cctggtttga
     3301 ggataacgct tcctgatacg acagtccggt ccatgagtag ccgacgcctg ccggaagttt
     3361 agcgaccagg tctgccataa atttcatagc gtcaccggta cttttcccgg ccgccgcttc
     3421 acctaaaatc tccattgacg ggatgccgtt gtagcgttcc aatcgcggtg aaccataggt
     3481 ccattcggta gacgagtagg cagaaagcgg tgccatcgtg ccagaggcgt tgcgtacata
     3541 ccattggttg atgttatccg gcaacatacg gaacggcgtg cctgcctgga catacacttt
     3601 tttcacccgc ccctggttga ggaagtcgtt cacgtagctg ctgccgaagg cggtggaaat
     3661 tgtctggttg atatcagaca gcgccacacc cattgcctca gctttcgcgg cgttgacgtt
     3721 cactttgaac atcggcgtat cttccaggcc gttcgggcgt accccggtga cctggtcagg
     3781 cgattgcgct gccagtgata acagctcgtt tcgtgcctgg gttagttttt cgtgccccag
     3841 gttaccgttg tccagcagtt ccatatcaaa acctgacgcg gtacccagtt cagccaccgc
     3901 gggtaagttg aacgggaaga cgacggcttt attgatactg cttaacgcaa tcattgcccg
     3961 ctgaatgatc gcggtaaccg agttttcctc accgacacgt tcagaccacg gcttgagact
     4021 gataaacgcc aggccgttgt tttgcccctg gccgctgaag ccaaagccgc caacggtaaa
     4081 caccgactga acattatctt tctcttttgt aagataataa tccgtcacct gttgcagcac
     4141 tttcgtggtg ttaaccatgg tggcaccgga aggtaactgc gcggtggtca taaatacccc
     4201 ctgatcctct tctggtaaga aagaggtcgg tgtacgcagg aacagcaccg ccatcccggc
     4261 gcaaatcagc aggtagacca ccatgtagcg accggtacaa cgcaacagcg agcgggtgct
     4321 atcggtatag tgctgagttg atttttcaaa cagcgtgttg aagcgtgcga acagggcgtt
     4381 aggtttgtga ccgccttccg gcgcggcttt cagaatggtg gcgcacaggg caggggtcag
     4441 gctcattgcc acaaatactg aaagcagcat ggaggagatc agcgtgatgg agaactggcg
     4501 gtagatctcc ccggttgcgc cgctcataaa ggccatcggc ataaacactg cggaaagaac
     4561 aacagcaata ccgaccagcg cacgttggat ctgccccatc gatttatgcg tcgcttcctt
     4621 cggtggtagc ttatcttccg caatgacacg ctcgacgttc tccaccacca cgatggcgtc
     4681 atccaccagt aaccctatcg ccagcaccat cccgaacata gttaacgtgt tgatggtgaa
     4741 accgaccgcc gacaagatcg caaacgtccc gagaataacc accggtacgg caatcgtcgg
     4801 gatgattgtg gcacggaaat tctgcaaaaa cagatacatg accaggaaga cgaggatgat
     4861 agcctcaacc agtgttttaa aaacttcctg aatagaaatt tcgataaacg gcgtggtgtc
     4921 gtaaggataa accgtcttca gacttgcggg gaaataggct gataagcggt tcagctcctc
     4981 tttgactgcc cgcgaggtat ccagggcgtt tgctccggta gccagtttga tggcgatccc
     5041 ggcagcaggt ttgccgttat agcgcgccac ggtggaataa tcttccgctc caagttcgac
     5101 gcgggcgaca tcacgcagca gcacttgcga accatcttgc tgaactttca acaggatttt
     5161 gccaaattct tccggcgttt gcagacgcgt ctgcacaatg atcgaggcgt ttagttgctg
     5221 gtctgccgcc tgtggcatgc cacccagttg accaccggaa atctggttgt tttgcacctt
     5281 aatctgggaa ataacatcgg aaggtaccag attgtattta ttgagttttt gcgggtccag
     5341 ccagatacgc atggcgtact cggaaccaaa gagctgtacg ctaccaacgc ccgcggtacg
     5401 gcttagcggg tctttgatat tagacgctac atagtccgcg atatcgtact ggttgaggct
     5461 gccgttatca gaaataaacg ccgctaccat cagaatatta ctgctcgact tatcaacgct
     5521 aatcccctgc tgctgcaccg cttcaggtaa tgaaggcata gcgagttgca gtttattttg
     5581 cacctgaacc tgtgcgatat caggagatgt cccagtctcg aaggtcagag tgatagaggc
     5641 attacccgcc gcatcactgg ttgaagacat gtacatcagg ccatcaagcc cattcatatt
     5701 ttgctcaatc acctgagtga ccgagtcttc taccgtttgc gcatcggcac ctggataggt
     5761 agcgctgacg gtaatggtcg gtggcgcaat ctgcggatac tgcgcaaccg gtaagttcat
     5821 gatcgccaga ccacctgcaa gcatcataat aatggcaagt acccaggcaa aaaccgggcg
     5881 atcaataaaa tagttagcca tgaaagtccc cttaagcctg caacgttatt gtttcgattc
     5941 ggtgctggcg ttttcctggc tggaggaaat tgctcgtgct ttgatacccg gacgaatgcg
     6001 ttgcaaaccg gaaacgatca cccgatcgcc agcctgcaag ccagaggtga caacccactg
     6061 gtcgccgatg gctttgctgg cttcaatttc gcgtagctgc acaacatcgt ctttatccag
     6121 aatgagcgcc gttgctttac cctgggcgtt gtgggtgacg ccttcctgcg gcaccagtaa
     6181 tacattctgg cggctacctt catccactaa tgccgtgacg tacatgccag gcagcaagtc
     6241 accatttggg ttggggaaaa tcgcccgtaa cgtcacggag cccgtggttt catccaccgt
     6301 cgggtcggag aatttcagtg tgccggtctg gctgtagcgt ttaccatttt ccagattgag
     6361 ctgtactggc gtactgccct gaacctgttt gatttgccca ctggcgacct cttctttcat
     6421 gcgcaagaaa tcctgcaccg actgcgtgag atcgacataa atcgggtcca gacgttgtac
     6481 ggtaaccagc gaatctgcct gattagcggt aacgagtgcg ccgacggtca ccgacgattt
     6541 cccgctgacg cccgtaatcg gcgaggtgac attcgcgtat tgcagattga tcgtcgcctg
     6601 ttcaacagcc gctttggcga cggtgacatt ggcttctgct tcattcagct gggtgcgcgc
     6661 ggtgtcgtaa tcctgacggc taacgtagtt ggtcttcagc aacgatgcct ggcggttaaa
     6721 ggtgatgcgg gcattgctgg cggtagagag cgctttcgcc agcgagcctt tggcggagtt
     6781 tagctcggcc tgtaaaggtg caggatcaat ctgatacagc gaatcgccct ggttcacttt
     6841 atcgccttcg ataaagttgc gtttaatgat aataccgccc acctggggac gtatctcggc
     6901 aacttcataa ggaacggttc taccgggcaa ttcgctcaac acattgaccg aaccggggga
     6961 gagtgtgacg acaccgacct caggcgtcat ggcggcggcg ttttccgccg atttgtcatc
     7021 gcaggcggtg agcatcgcgc cgcagaataa caacggtatt aacagctttc ttcttctgtt
     7081 cattttagtc cctgaaaatt cttgagaaat aacggttctt taaattgcgc gcgaggagag
     7141 atatgaggga tttacagacc agcggcatag tggggttgtc agccagtaag gtgggataca
     7201 ggcacagtga tcgacatggt gaggtcaacg acaaaaaaaa tgttgccgtt ctgccaacag
     7261 ttcctgccag cattcgggca acgaagggtt ctactggtgg atacacatac caggggaata
     7321 aagtcgtttt agcctctcct ttagtaatca ccgggggtaa tgaaatcagc atctgcatcc
     7381 ctcgtcatgc cagccatcaa tttcagttgc ttatgtcctg actaaaaata agatgtgata
     7441 cccagggtga cgatgtcgct catacgtctt agtttcaact tgtacataat gttgaatttc
     7501 tgaatcttta atgtttgttg cgaaatattg agcgtcaacg tgatattgct ttcattttta
     7561 tttttcagaa tcagttgcat aattttgaac tgattatgtg aaaaacataa ttgtgaattc
     7621 ttatggggca agtgtttacc ataagtaatc tcaagaagat ttttgatact ttctttgcgg
     7681 ctaacaaaat aaataggcgc tttagctttt agtttactga tgtgataagg tgccaaaaca
     7741 ataattctct cggcatctaa tttctccaga aatttaatcg cttcttcatc aaggatatga
     7801 ttgtgatagg tatcaatgat aaccttgaag ggtttattgc ctactttttt gatctctgac
     7861 agggaattga tttttatcat ttcgtgatta tctttcaact gccaaaagcc ctgtaaaaga
     7921 aaagaatctt tcgtcatgag aaaaatcata acttgctcct tagccgttat cgtttcgaac
     7981 atgtcatcct tttcattatt tacatccttg tccgaatcgt tgttcaatat agtaaacgcc
     8041 tataagaact ttacccttcg tgaactaata cgtctattaa cactaatcaa tacttcagat
     8101 ttatccatca cgcactccat atattgatcc taagtaagat tcctggttgt tatcagcttg
     8161 taaatagtaa acaaaaagtt aacgtttgcg gattactgcc caagaataag ttatcaataa
     8221 ccagtttgtg atctctgaag aatattacta aagttaaaat gtaatccgat ttaaatatcg
     8281 agtctccttg tttcgactta agctggcaat tggattgcca gctttctttt aacgcattga
     8341 aattacctga gtaaataacg cattcatgtc ttcaggtttt tatatagcgt ctggagacac
     8401 ggatatttat gcaatgtaat caacgccagt tgcaaaaaaa tgaacccgga ttacttattt
     8461 aaccgcccat agcatcaacg cttacggaac tctttgttca ctttcccaca gcacttttaa
     8521 aacattaaac ctgactacgg aaaatatcag ccatgataat gtttgaaatg gctaatttgc
     8581 catggagtga aaaaaattag atgaaattca gtaggttgaa ataatcacta gcaggtaatt
     8641 atttcaatga tagtgcgcaa ttgatctaca acactgcgta gcggagagag tattaatcgg
     8701 atcatagtca catcaagtga ctatgatccg ggtgacaacc ggggtaatta ttgctgctta
     8761 acgaacaaac tggcgaagct gaacaggctg gcggcgctaa atatcagttc aattcccacc
     8821 agtgtggaaa ccagcgttac agacaccatc ggcgttgcac caaggaatat ccaggcaatg
     8881 acgatatcca gcacaccaat aacgagctgt agccagctgc ctttcattga acgctgacga
     8941 taccaactca tcaggcgaat aacccctgca acacagaaca aaccggcaat aaatgccgca
     9001 atggcaaaaa tgcccagctc cggtgcgcgg atgaagaaat agccgatcaa taaataggcg
     9061 actgcgacga ggaaaccgga taataccggc cagaaattat gactgcggtt gctgaataac
     9121 ccgacaataa gcgcaatacc cgagcagatt aataatgcac ccactactgt gcttaaaata
     9181 tcgccagaga cgaacgggaa actgatacac agcaacccga cgataaacag cagcacggca
     9241 ataaactgga ttgctctgcg atgtttttta agcatctcca gatcaaactt caaaattgtt
     9301 gccttatcta tatataacat agaaccaccc tataaaatta agaagaaaat cccctgctat
     9361 caatctatgc caaaaacgcg tctaagaatg cagtcgattt aataaaaatt tcctaattgc
     9421 agtatctgat gcatctgtaa ctcattgtat tgaaataaaa atatctgatt ttgatatttt
     9481 ccatcaacat gacatataca gaaaaccagg ttataacctc agtgtcgaaa ttgatttgtg
     9541 acggctcttt cactttatag ttgaggatat tacgatgaaa aaagtattag gcgttattct
     9601 tggtggtctg cttcttctgc cagttgtgag caatgcagcg gatgcgcaaa aagcagctga
     9661 taacaaaaaa ccggtcaact cctggacctg tgaagatttc ctggctgtgg acgaatcctt
     9721 ccagccaact gcagttggtt ttgctgaagc gctgaacaac aaagataaac cagaagatgc
     9781 ggttttagat gttcagggta ttgcaaccgt aaccccagct atcgttcagg cttgtactca
     9841 ggataaacaa gccaacttta aagataaagt taaaggcgaa tgggacaaaa ttaagaaaga
     9901 tatgtaattc cgggaatgcg ttacatcgta cttccttgca tattgaacag gccggaatat
     9961 cttctttaaa agcagctatt cctcctgttc atatataatc tatatattga atgggttaca
    10021 aaatgaatat ttcatctctc cgtaaagcgt ttatttttat gggcgctgta gcggctttgt
    10081 cactggtgaa cgcacaatct gcgctggcag ccaatgaatc cgctaaagat atgacctgcc
    10141 aggaatttat tgatctgaat ccaaaagcaa tgaccccggt tgcatggtgg atgctgcatg
    10201 aagaaacagt atataaaggt ggcgataccg ttactttaaa tgaaaccgat ctcactcaaa
    10261 ttcctaaagt gatcgaatac tgtaagaaaa acccgcagaa aaatttgtat accttcaaaa
    10321 atcaagcatc taatgacttg ccgaattaat gaggtacaag taaaaaggag tagcaagttg
    10381 agccatcttg ctgctccttt ttgcattttt atatgacagc agaatttatt atacgtctta
    10441 tactcgcggc aattgcctgt ggcgctattg gcatggaaag gcaaatgtga ggcaaaggag
    10501 cagggttacg cacacatgta ttaattggca tgggaagcgc cctgtttatg attgtttcga
    10561 aatatggttt tgctgacgtg ctgtctttag atcacgtcgg actcgacccc agccgtattg
    10621 ctgctcaggt ggtgacgggc gtcgggttta tcggtgcagg taacattctc gttcgtaacc
    10681 aaaatattgt aggtttgacg acggcagcgg atatctggat gaccgccgct ataggtatgg
    10741 ttattggcag tggtatgtac gaattgggta tgtatggttc agtgatgacc ttgctggtgc
    10801 tggaagtctt ccatcaatta accttccgcc tgatgaacaa aaattaccat ttacagctga
    10861 cattagtgaa cggtaatacg gtatcaatgc tcgactggtt taagcagcaa aaaataaaaa
    10921 cggatttagt ttcgttgcag gaaaatgaag atcatgaagt ggtcgccatt gatatccagc
    10981 ttcatgccac aacgtcgata gaagatctgt tgcgattatt aaaaggtatg gcaggggtga
    11041 aaggcgtttc aattagctaa tctgtgtggc agcgtagtca gactcaccgt aagcctgaaa
    11101 ttcacaccag ataatcaata tgctgatggc gtaccagctc attgatccgc ttaagattga
    11161 ggatcatcat gatattgtgt ttatggcagt agaacgtttt tagcgttatt ttcagtttct
    11221 ccagaatatc ctccgttgtc atttgattcg caatgcagct cagaacctga tgttgcttgc
    11281 gcgaaagtga cacagccgct tcaggcacag agcagtaact gccattgatg agtgcgacaa
    11341 aatcgatgat agtgatagtc cgcggaacaa aggtcaccgg cactttcccc aggcagcgtt
    11401 taatattaaa gggggagaaa ataatcacat ggacaggttt taatcgttca atttgagtga
    11461 gaaaattaga atgaaataca ttattcatta atgtatcaat aatgacaaag gcattctgat
    11521 gcaacattcc gtcgatctct tcttcgttct gtatatgaac gacattacct ttgctcaaaa
    11581 tgtttttcat cgcggtgaag aacatcgtat ccctggtaat tataagaaac ataaccgact
    11641 cctggtgcgg acattaattt tataatcagt ttgccaaagg taattaacag gacagggctt
    11701 ataataataa tagttagctt gctgtgtatt aattttatgt aatgcacgat gcagatgctg
    11761 agaaagcatc tgcatctttc ggtggtgtta tttgaccagc tcaggtgtta cctgactcac
    11821 cgcattggtg tagtaaggcg caccccagcc cggttccggc cagaatgcac catagccgta
    11881 atcccatagg ttataggtgg tattaaccac ttctctcaaa tgccacacct ggatgccctg
    11941 catattcact tccaggaagt tatacgggac tttattgata aagccaggtt gttcaccctg
    12001 aatggtaccg aggatggtaa caaagtgatt acgatagttc actgggtcaa ggaagccgct
    12061 ttgtctggcg agcagtcggc cctgatagtt ggcttcaata tcaggtttcg catagctatc
    12121 caacggtaat acagcgattt ctaacaacgt atccgttttg ccattgataa cgttgataac
    12181 cttcccacca aagcgcgctt gttgaccaac atataacccc ggctggttat gaacagcaac
    12241 aaaacttttt tgaatatcag gttggttatt gcctttgata ttttgcggaa ttgaactaca
    12301 tgcggcaagc aaaaatgaaa ggctgaggat gagtgcacct tttgtcatgt tcatgttact
    12361 atccttatca acaaatatta aaaccataat agatatttct ttatagtttt catctgattc
    12421 tgaggcgata tgcctgatag taacgtaaac ctgtctgatg tttatatccc ttttgtttag
    12481 ttcaattcca ttgattttgg ggcgtggcat aagtatccat cgccccataa tataatcctt
    12541 tgttttaaaa ttacataaaa tctattttta ttcaataatt ataaagtgct aataatcaat
    12601 attatggtat tatattctga taatgatttg ataagcgaat tcttttgcca gatggtattt
    12661 ctatttccac cccataattt atatcttttt cattaggaag tggcctcttt aaataaggcg
    12721 tgtgtgacat tttttttggg ttaagcgtct cgaattgaaa tacttcgaac tgatattcag
    12781 acatttctgc ccatgtttga attttattgt atcgagagag tgtcgtagag gctttaactt
    12841 gcttataaca ttgtttttgg aattcttgct gatattttaa tatgtcattg tatgaaagat
    12901 tggttatcct ggcctctaaa aatttaatta ttgtcgaagc aatttccgct tttgctcgta
    12961 aaaagttgtc attaatggtt aataatgttg aaaataaacc ttcgatttgt ttgtcaagat
    13021 attgtccatc tttatataat ttgggggggt agggtgttct ttatgtaaaa aatagtgtca
    13081 cctaaatttg cgtcagtgaa atttatatta agtagatctt cgaaataaaa ccttgacaag
    13141 gttagaacga acccggaaag gttctgtcct gtcatattga aatcaataaa gttggttccg
    13201 gcaaagactt tcatcctgtt tttattttca ctgtgctcaa tatataactt cgtcattttt
    13261 tgatacaggc tttgaatatc ttttatatta gttggtaagt cagctcgttg ttcagcaata
    13321 aaattagtat ctgaaaacat ggtttggaca ctgaatgtta tgggtattcc ctcttctacg
    13381 ctaattttag ttatgattgc cttgtcgggt ttaggattag cgacaacaat gattcgacat
    13441 tcagcacttt tgtttttttc atatctaatg ttattaatct gattaagtat tgattgtgtc
    13501 tgttgcgtaa gtggtgtcga acttatcgtt tcaatgttat taataagact tacaagttga
    13561 accacaactt ttgagtagtc tgcatttgta tatgtggtgt tcgtgtggca tgcattaatt
    13621 tgttggagtt gttgttgcgc taaatcaaat tgttcagggt tgtatccttc tccagagaat
    13681 gtggaattaa tgggttgttg ttcttcccaa ttatcacaag gccacttcgg tgtgtctggc
    13741 gttttaacat tatcggtatt tgttgtgcag ttataaatat tgccgtgata tgtatttatt
    13801 atacctgggg taaagtcaat tgacataaca ttccttattc atcatctgtt ttatgctaag
    13861 gtttttaaat tggataatta gaacaggaat ggattttctt ctacacacaa taaatataat
    13921 gcgttatatc ttcctgatat aattaccttt aaattccctt tcatttccac ccggtaatat
    13981 ttgtgtataa aaaaagcagt gatagtatcg taaaggaaaa cgttaacaac tatcaaaaag
    14041 cgctcatttt aaaaagttat tatgttctcc gatagtgtgt gaagtaatat ttttgtgatg
    14101 ttttagatgt gtaataatga accaggttaa agtgtattta aaaatgtgtt gtattagcga
    14161 ctgaaatctg ccttttaaaa aggaggaggg tactgagaca aagagtcatt gcttctccga
    14221 ta
//
LOCUS       DAJVUK010000107        14189 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.107, whole genome shotgun sequence.
ACCESSION   DAJVUK010000107 DAJVUK010000000
VERSION     DAJVUK010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14189
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.107"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(93..389)
                     /locus_tag="OQQ57_002915"
     CDS             complement(93..389)
                     /locus_tag="OQQ57_002915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957603.1"
                     /translation="MRFLLANTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNRDWL
                     SMSIFSDYSFSIEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT"
     gene            673..2304
                     /gene="oppA"
                     /locus_tag="OQQ57_002916"
     CDS             673..2304
                     /gene="oppA"
                     /locus_tag="OQQ57_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HCS1957604.1"
                     /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            2390..3310
                     /gene="oppB"
                     /locus_tag="OQQ57_002917"
     CDS             2390..3310
                     /gene="oppB"
                     /locus_tag="OQQ57_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HCS1957605.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            3325..4233
                     /gene="oppC"
                     /locus_tag="OQQ57_002918"
     CDS             3325..4233
                     /gene="oppC"
                     /locus_tag="OQQ57_002918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HCS1957606.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFIHNRAAVASLM
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            4245..5258
                     /gene="oppD"
                     /locus_tag="OQQ57_002919"
     CDS             4245..5258
                     /gene="oppD"
                     /locus_tag="OQQ57_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HCS1957607.1"
                     /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTLGRLCACFKPVE
                     ELL"
     gene            5255..6259
                     /gene="oppF"
                     /locus_tag="OQQ57_002920"
     CDS             5255..6259
                     /gene="oppF"
                     /locus_tag="OQQ57_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HCS1957608.1"
                     /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGIKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(6312..6641)
                     /locus_tag="OQQ57_002921"
     CDS             complement(6312..6641)
                     /locus_tag="OQQ57_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HCS1957609.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(6676..8136)
                     /gene="cls"
                     /locus_tag="OQQ57_002922"
     CDS             complement(6676..8136)
                     /gene="cls"
                     /locus_tag="OQQ57_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HCS1957610.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
     gene            8279..8452
                     /locus_tag="OQQ57_002923"
     CDS             8279..8452
                     /locus_tag="OQQ57_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HCS1957611.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            complement(8507..9760)
                     /gene="kch"
                     /locus_tag="OQQ57_002924"
     CDS             complement(8507..9760)
                     /gene="kch"
                     /locus_tag="OQQ57_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HCS1957612.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCLAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESAQK"
     gene            complement(10060..10356)
                     /locus_tag="OQQ57_002925"
     CDS             complement(10060..10356)
                     /locus_tag="OQQ57_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415767.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HCS1957613.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            10571..11299
                     /gene="tonB"
                     /locus_tag="OQQ57_002926"
     CDS             10571..11299
                     /gene="tonB"
                     /locus_tag="OQQ57_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707161.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HCS1957614.1"
                     /translation="MTSMTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAP
                     AQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK
                     PKPVKKVQEQPKRDVKPVESRPASPFENTALARLTSSTATAATSKPVTSVASGPRALS
                     RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRY
                     EPGKPGSGIVVNILFKINGTTEIQ"
     gene            complement(11339..11737)
                     /gene="yciA"
                     /locus_tag="OQQ57_002927"
     CDS             complement(11339..11737)
                     /gene="yciA"
                     /locus_tag="OQQ57_002927"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HCS1957615.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRALPVE"
     gene            complement(11842..12381)
                     /locus_tag="OQQ57_002928"
     CDS             complement(11842..12381)
                     /locus_tag="OQQ57_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HCS1957616.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            complement(12411..13154)
                     /locus_tag="OQQ57_002929"
     CDS             complement(12411..13154)
                     /locus_tag="OQQ57_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HCS1957617.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
     gene            complement(13182..13271)
                     /locus_tag="OQQ57_002930"
                     /pseudo
     CDS             complement(13182..13271)
                     /locus_tag="OQQ57_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            13511..14149
                     /gene="ompW"
                     /locus_tag="OQQ57_002931"
     CDS             13511..14149
                     /gene="ompW"
                     /locus_tag="OQQ57_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HCS1957618.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF"
BASE COUNT         3823 a         3316 c         3471 g         3579 t
ORIGIN      
        1 gcgcagttat caaaagcaaa aggaataggt aaaaatattc ttctcaaatt acagttagtt
       61 ataaggattt tcttaactgc ttctcctcac catcatgtta ttttcgccac atcataatcc
      121 tgggcttgct gaagaataat tgaaatgata ttagtaattc cactgccttt ggtagaggaa
      181 agtgctaaat aataatcaat tgttaaatta ttgtgcattt caatactgaa actgtaatca
      241 gaaaagatag acatgcttag ccaatctcta tttgattgaa ttgaaagatg tttgttaagg
      301 catggatgca agctatagat tctgatacgg tcaataaaag agaattgctt aacaattttg
      361 caaaatgtat tggcgagtaa gaaccgcatt tagtactttc cgggcaaccg ccagacgatt
      421 ctttattggt aatgagaata attaacaatt aaagagcgtc gcgaaagaat aatgtgtctc
      481 gacaggggag acacagtacg aatcgacata aggtgatcgt ctgaatcacc agaataaata
      541 aagtcggtga tagcaatccg taacgataaa gtaacctgac agcagaaagt ctccgagcct
      601 gtgcagggtc ccaatccggg attacacatg ctggttaata ccagtaatta taatgaggga
      661 gtccaaaaaa caatgaccaa catcaccaag agaagtttag tagcagctgg cgttctggct
      721 gcgctaatgg cagggaatgt cgcgctggca gctgatgtac ccgcaggcgt cacactggcg
      781 gaaaaacaaa cgctggtacg taacaatggt tcagaagttc agtcattaga tccgcacaaa
      841 attgaaggtg ttccggagtc taatatcagc cgagacctgt ttgaaggctt actggtcagc
      901 gatcttgacg gtcatccggc acctggcgtc gctgaatcct gggataataa agacgcgaaa
      961 gtctggacct tccatttgcg taaagatgcg aaatggtctg atggtacgcc agtcacagca
     1021 caagactttg tgtatagctg gcaacgttct gttgatccga acactgcttc tccgtatgcc
     1081 agttatctgc aatatgggca tatcgccggt attgatgaaa ttcttgaagg gaaaaaaccg
     1141 attaccgatc tcggtgtgaa agctattgat gatcacacat tagaagtcac cttaagtgaa
     1201 cccgttccgt acttctataa attacttgtt cacccatcaa cttcaccggt gccaaaagcc
     1261 gctatcgaga aattcggcga aaaatggacc cagcctggta atatcgtcac caacggtgcc
     1321 tataccttaa aagattgggt cgtaaacgaa cgaatcgttc ttgaacgcag cccgacctac
     1381 tggaacaacg cgaaaaccgt tattaaccag gtaacctatt tgcctattgc ttctgaagtt
     1441 accgatgtca accgctaccg tagtggtgaa atcgacatga cttataacaa catgccgatc
     1501 gaattgttcc agaagctgaa aaaagagatc ccggacgaag ttcacgttga tccatacctg
     1561 tgcacttact attacgaaat taacaaccag aaaccgccat tcaacgatgt gcgtgtgcgt
     1621 accgcactga aactaggtat ggaccgcgat atcattgtta ataaagtgaa agcgcagggc
     1681 gacatgcccg cctatggtta cactccaccg tatactgatg gcgcaaaatt gactcagccg
     1741 gaatggtttg gctggagcca ggaaaaacgt aacgaagaag cgaaaaaact gctggctgaa
     1801 gctggttata ccgcagacaa accgttgaca atcaacctgt tgtataacac ctccgatctg
     1861 cataaaaagc tggcgattgc tgcctcttca ttgtggaaga aaaacattgg tgtaaacgtc
     1921 aaactggtta accaggagtg gaaaacgttc ctcgacaccc gtcaccaggg tacttttgat
     1981 gtggcccgtg caggctggtg tgctgactac aacgaaccaa cttccttcct gaacaccatg
     2041 ctttcgaaca gctcgatgaa taccgcgcat tataagagcc cggcctttga cagcattatg
     2101 gcggaaacgc tgaaagtgac tgacgaggcg cagcgcacag ctctgtacac taaagcagaa
     2161 caacagctgg ataaggattc ggccattgtt cctgtttatt actacgtgaa tgcgcgtctg
     2221 gtgaaaccgt gggttggtgg ctataccggc aaagatccgc tggataatac ctatacccgg
     2281 aatatgtaca ttgtgaagca ctaatggcaa tacgtggggc aggagtgtcc tgctccacgg
     2341 tgtctgattt ttatcgcatt acagaaggca caggccagaa ggtagggcaa tgttaaaatt
     2401 tattctacgt cgctgtctgg aagcgattcc gacgctattt attcttatta ctatttcgtt
     2461 ctttatgatg cgcctcgcgc cgggaagccc ttttaccggc gaacgtactt taccgccaga
     2521 agtgatggcc aatatcgaag cgaaatatca tcttaatgat ccgatcatga cacagtattt
     2581 cagctacctg aaacaactgg cgcacggtga tttcggtcca tcgtttaaat ataaagatta
     2641 ttcggtcaat gacttggttg catccagttt tcccgtttct gccaaactgg gagccgcagc
     2701 atttttcctt gcggtaatac tgggtgttag tgctggcgtt attgccgcat taaaacaaaa
     2761 caccaaatgg gactataccg tgatggggct ggcaatgacc ggggttgtta tccccagttt
     2821 tgtggttgca ccattattag tcatgatatt tgcgatcatt ttgcattggc tgccgggcgg
     2881 tggctggaat ggtggggcgc ttaaattcat gatattgccg atggtggcgt tgtcactcgc
     2941 ttatatcgcc agtattgcgc gtattacccg tggctctatg attgaagtat tacactccaa
     3001 ttttattcgt actgcccggg cgaaagggtt acctatgcgg cggatcattt tacgtcacgc
     3061 attaaaacct gctctgttac ccgtgctctc ttatatgggc cccgcatttg tcggcattat
     3121 taccggttct atggttatcg aaaccattta tggtttgccg gggattggac aactgttcgt
     3181 taatggcgca ttgaaccgtg actattcctt agtgttaagc ctgaccatcc tggttggtgc
     3241 tttaaccatt ttgtttaatg ccattgtcga tgtgctatat gcggttatcg acccgaaaat
     3301 ccgttactga tactggagct cgcgatgatg ttaagtaaga aaaacagcga gacgctggaa
     3361 aatttcagtg aaaagctgga ggtcgaaggg cgcagcttgt ggcaggacgc acgtcgacgt
     3421 tttattcata accgtgcggc ggttgccagt ctgatggtgc tggtgctgat cgcgttattt
     3481 gtaatcctgg caccgatgct ttcccagttt gcctatgacg atactgactg ggcgatgatg
     3541 tccagcgccc cggatatgga gtccggtcac tactttggta ctgactcatc cggtcgcgac
     3601 ctgcttgtgc gcgttgcgat tggtgggcgt atctcactca tggtcggtgt tgctgcggca
     3661 ctggtggctg tggtcgtcgg gacactttat ggttcgcttt ccggttatct gggcggtaaa
     3721 gtggattcgg taatgatgcg tctgctggaa atcctcaact ccttcccatt catgttcttc
     3781 gtcattttgc tggtgacctt tttcggtcaa aacatcctgc tgattttcgt ggcgataggc
     3841 atggtttcct ggctggatat ggctcgtatt gtgcgtgggc aaaccctgag tctgaagcgc
     3901 aaagagttta ttgaggcggc acaagttggc ggtgtatcga catcgggcat tgttattcgc
     3961 cacattgtgc cgaatgtact cggtgtggtg gtggtctacg catcacttct ggtgcccagc
     4021 atgatcctct ttgaatcttt ccttagcttc ctggggttgg gtacgcaaga gccgttaagc
     4081 agctggggtg cattgctgag tgatggcgcg aactcgatgg aagtctctcc atggttattg
     4141 ttgttcccag cgggattcct cgtggtgacg ctgttttgtt tcaactttat cggcgatggc
     4201 ttgcgtgatg ccctcgaccc gaaagatcgt taaggagtgc agccatgagc gtaattgaaa
     4261 ctgcaactgt gccgctcgca caacaacagg ctgacgcact gctgaacgtg aaagatttgc
     4321 gtgtcacctt tagtaccccg gacggcgacg tcacggcggt caatgatttg aatttttccc
     4381 tacgtgccgg agaaacgctg ggtattgtag gtgagtctgg ttcgggtaaa tcgcaaactg
     4441 catttgcgtt gatgggcctg ttggctgcca acggacgtat tggcggatcg gcaaccttca
     4501 atgggcgtga aatcctcaat ttgccagagc atgaactcaa taaactgcgc gctgaacaaa
     4561 tctcaatgat ttttcaggac ccaatgactt cgttgaatcc ctatatgcgc gtcggtgagc
     4621 agttgatgga agtgctgatg ctgcataaga acatgagcaa agctgaggcg tttgaagagt
     4681 cggtgcggat gctcgatgcg gtaaaaatgc cggaagcacg taaacgcatg aaaatgtacc
     4741 cgcacgagtt ttctggcggc atgcgtcagc gagttatgat tgcgatggca ttgctatgtc
     4801 gacctaagct gctgattgcg gatgaaccca ctacagcgct ggacgtcacc gtacaggcgc
     4861 agatcatgac gctattaaat gaactgaaac gggaatttaa taccgccatc attatgatta
     4921 cccacgatct tggcgtggtg gcggggatct gtgacaaagt gctggtaatg tacgccgggc
     4981 gcacgatgga atatggcaac gcgcgcgatg tcttttatca acccgttcat ccttattcta
     5041 tcggtttgct caacgcggtg ccgcgtctcg atgcggaagg tgaaacaatg ttgaccatcc
     5101 cgggtaatcc gccaaacctg ctgcgattac cgaaaggttg cccgttccag ccacgttgtc
     5161 cgcatgcgat ggaaatttgt agtagcgcac cgccgctgga agagtttacg cttggccgtc
     5221 tgtgtgcttg ctttaaaccg gtggaggaac tgttatgaat gctgtaaccg aaggaagaaa
     5281 agtcctcctt gaaatcgccg atctgaaagt gcactttgaa atcaaagatg gcaaacagtg
     5341 gttctggcaa ccgccgaaaa cgctcaaagc cgtcgatggt gtcacgcttc gcctgtatga
     5401 aggggaaaca ttaggtgtgg taggggaatc gggatgcggt aagtccacct ttgctcgcgc
     5461 catcattggc ctggttaaag cgaccgacgg tcatgttgcc tggttaggta aagagttgct
     5521 gggcattaag cccgatgaat ggcgtgccgt tcgcagtgat attcagatga ttttccagga
     5581 tccgttggca tcgctaaacc cgcgcatgac catcggcgag atcatcgctg aaccactgcg
     5641 tacttatcat ccgaaaatgt cacgtcagga agttcgcgag cgcgtgaagg cgatgatgct
     5701 gaaagtcggg ttattgccta acctgattaa ccgctatccg catgagttct ccggtgggca
     5761 gtgccagcgt atcgggattg ctcgtgctct tattcttgaa ccgaagctga ttatctgtga
     5821 tgagccggtg tcggcgctgg acgtgtcaat tcaggcgcag gtggtcaacc tgctccagca
     5881 gctgcaacgt gagatgggat tgtcattaat ttttattgct catgacctgg ccgtggtaaa
     5941 acacatttcc gatcgtgtgt tggtgatgta tctcggccat gcggtagaac tggggaccta
     6001 tgatgaggtc taccacaatc cactacatcc ttacaccagg gcattgatgt cggcagtccc
     6061 catacctgat ccggatctgg agaagaacaa aaccatccag ttactggaag gggaattacc
     6121 gtcgccgatc aacccgcctt ccggttgtgt tttccgtacc cgttgcccga ttgccggtcc
     6181 ggagtgcgcc aaaacacgtc ctgtgctgga agggagtttc agacacgccg tttcttgcct
     6241 gaaagtcgat ccgctttaaa cacaataagg gctgacagtt gtcagccctt tttcacgccg
     6301 aaagcgatta tttattcccg ccagatgata tggcaaagtt tgtgatcttt ttcgcggcat
     6361 aacagaatgc gggcgaaaac atcgttgatt tcaccatcct cactgtccgc cagaccaatc
     6421 accacttcgg caaaaaagtc cgggttcaaa tcgaaatcaa catgttcctg ccagtcttcc
     6481 accggatcga ataactccgc gccgccgcgc tcttcaaact gaagattgaa cagcagaaca
     6541 tcagctgggt cgagattgtc ggcagccagt tcgagaaaaa tatcgtaggc ctgctcaagc
     6601 gtttcatctt cagtcaggcg attgtttaga tccatatcca tagtcactac ctgtttaacc
     6661 tctgttggag acgttttaca gcaacgggct gaagaagtaa aacagtcgct cggcgacacg
     6721 ttgccataat ggacgtttta gccataaacg ggcatcgagc agacgtgaac gcgaaatata
     6781 atcgtcctga acggcggcaa ggtctgcacc aaaaccttta tcgtcgattg ccagggtaat
     6841 ctcgaaattc agccacagac tacgcatatc aaggttaacg gtgccaacca gacttagttc
     6901 gccatcgacc agcacgctct tggtatgcag taacccgcct tcaaactgat aaattttaac
     6961 cccagcagca agaagttccg taaagaatgc gcgactggcc cagccgacca gcatcgagtc
     7021 attttttcgc ggaaggataa tactgacatc caccccgcgc tgtgccgccg tgcaaatcgc
     7081 atgaagtaaa tcatcgcttg gcacaaagta gggcgtggtc atgatcaaat attcacgcgc
     7141 cgaataagcc gcagtcaata atgcctggtg aatgagatct tccggaaagc cggggccaga
     7201 agcaattgtg tgaatggtgt gaccgctggc ctgttcaaac ggcataatat tgacatctgg
     7261 tggtggcggc agaatacgtt ttccggtttc aatctcccag tcgcaggaat aaataatccc
     7321 catcgcggtg gcgatggggc cttccatacg cgccatcaga tcaatccatt gccctacgcc
     7381 cgcatcttgt ttgaagtagc gaggatcgac catattcatg ctgccggtgt acgcgatgta
     7441 attatcgatc atgatcatct tgcgatgttg gcgcaggtcc atacggcgta aaaacacacg
     7501 catcagattg acctttaagg cttcgaccac ttcaataccg gcattacgca ttagctcggg
     7561 ccacgggctg cggaaaaaag ccacactccc ggcggagtcg agcatcaatc ggcaatgaat
     7621 gccgcgtcgc gcagcggcca ttaatgattc agccacctgg tccgccatgc cgccgggctg
     7681 ccagatataa aacacaatct caatattatg gcgcgcgagc tggatgtcgc ggattaacgc
     7741 ctgcatcaca tcatctgact cggtcatcag ttgtagctga ttccctttga ccccagcgat
     7801 cccctgacga cgctcgcaaa gcttgaataa tggcgcagcg acactgctat tttcttcggc
     7861 gaagatatgc ttacaggctt taaggtcgtt aagccatttt gcggtggaag gccacatcgc
     7921 tctggcgcgc tcagcgcggc gtttgcctaa atggagctcg ccaacggcaa gataggcaat
     7981 aattccgact aacggcagaa tgtaaataat caacagccag gccatcgcgg agggaactgc
     8041 gcgtcgtttc attagaatgc gtaaagttac gcctgcaatg agcaaccagt atcccagaat
     8101 ggccaaccaa ctcaccaacg tataaacggt tgtcatagat tagaaatcct tttgaaagcg
     8161 cattgttatg agtttacgca tatggattca tctggcaaat aaaaacgcgg gaaaagcact
     8221 ggtcagcgtc gggggcgggg gtataatgac cattctgtta ttgcatagag tagttaacat
     8281 gaagcggagt agaacggaag tggggcgctg gcgcatgcag cgtcaggcta gccgacgtaa
     8341 atcgcgttgg cttgaggggc aatcgcgccg aaatatgcgt atccacagca tcaggaagtg
     8401 cattctaaac aaacagcgta actcgttatt gtttgcgatc tacaatatct aaatgtactg
     8461 ggcaccattg cggtgcccaa taagtttact cctccatctt taaactctat ttttgcgccg
     8521 attctttact gtcagctttc gtttcttgtt catcgttatc gctgaaaatg ccatgaccgg
     8581 agttcaacaa cattgaaacg agcatatcat tattaatctc ttcaccattt aaaactcgcg
     8641 ccagaatttc gctgccaaac agttgcggtg agagaatgat atccggatgt accatcttaa
     8701 tcttattcag gtttttgcta tcactgacgg cgagaactgt tttgacatca ctgctcatat
     8761 cttttgccga gagtacaaca aacgcgttat ctgcatcgtt atcactcagc gccagaatgg
     8821 ccaggcaacg atcgattccc gctttcttta atactgaact gtcattactg tcaccgggga
     8881 taacatcagc gttatcgcct aagcgttgct caagttgctt gatatcatct tcaggcaagt
     8941 tgctgataac cgttacgttt tgtccgcgtt gattcagttg cagaatcgta ttgatggcga
     9001 gaatcgaatg tccgcaaaca ataaaatgat ctttacgatg cattgtatga ttgtttcctt
     9061 ttacaagttt gttgaatccc ccgcggataa gcggaccaaa aattgaggtc atagatgtgg
     9121 caaaaacggt aataccggaa ataatgaccg aaatagtgaa caatcgtgct gattcagaaa
     9181 cagggacaat atcgccatag ccgacggttg acatggtttc tatcgaaaaa tagaacgcgg
     9241 tcatcaaact ttctattcgc ggattaaaac cttcgcttaa ataaagcgca ccgtaggttg
     9301 agtaaaacag taatgtcgtg aaactaataa atgcaaaaat tgtcccggct gcggcgctac
     9361 tgtgggagaa gtctttgcgc agtatcagca aaaacaccag cgtaaaaatg caaaatccaa
     9421 tactaaattt caaccaggga taaaaatgca gggtataaat tagcgctatc aacaacaaaa
     9481 tgatactgat tgcccatgcg agctttgccc ggaacagtaa gccaatggag ttcaggacaa
     9541 gaaagacgcc gagcataaat agtggggcgt ttgccagcaa ggagagatcc aactctgaaa
     9601 atgctttgat atggaaaata tctagcaaat tgaccgacat accatagatt gttttaaaaa
     9661 taagcaatcc atttaaaaag acggccagcg cgagaatgtc gtgccgtagg gtcacccata
     9721 aatttgttgc tgtttgtttg aatgtagccc agtgactcac tgatacctct gtaaccacaa
     9781 ttttgtttaa ttatcttagc gtgcacattt tctgaacata catgcagcgc gtgaatgtgt
     9841 taaacaatag tagatgactt tatccgcagt aatcaaaggt tttgagcgag caactgtacc
     9901 tcaggaaagg tcatttttcc tgaatatgct cacatcatat aaagaaatac agataaagtt
     9961 attatctgct tgtggtggtg aatgcactga ccggctataa ggaaaggcca aacaagaaca
    10021 cggttgcaaa aaccgtgccc ttaaatattg aatctctatt cagaacactt tcttaaatgg
    10081 tttcactgaa acgtgttcat agactcctgc cgctacgtac gggtcagcat cggcccaggc
    10141 ctgagctgct tccagcgatt caaattcagc aataacggtt gagccagtaa atcccgcagc
    10201 ccctggatcg ttactgtcta ccgctggcat tggaccagct gtcaacaaac gaccttcatc
    10261 atgcagtaac tgtaaacgtg ctaaatgtgc cggacgaacg gaaaggcgtt tttcgaggct
    10321 atcagctttg tcttgagcgt aaataacata caacacgggc acaactcctt gttcgggaaa
    10381 gttgtaaagt acgttatttg aaagggcgaa gatctgcaac ggaaagatga tgtctttgtt
    10441 aagaccatgc ataaagtaag gttaattacg gcaaaaatga cattttcact gatcctgatc
    10501 gtcttgcctt attgaatatg attgctattt gcatttaaaa tcgaggcttg gtttttctac
    10561 tgaaatgatt atgacttcaa tgacccttga tttacctcgc cgcttcccct ggccgacgtt
    10621 actttcggtc tgcattcatg gtgctgttgt ggcgggtctg ctctatacct cggtacatca
    10681 ggttattgaa ctacctgcgc ctgcgcagcc aatttctgtc acgatggttg cgcctgctga
    10741 tctcgaaccg ccacaagccg ttcagccgcc accggagccg gtggtagagc cagaaccgga
    10801 acctgagccg atccccgaac cgccaaaaga agcaccggtg gtcattgaaa agccgaagcc
    10861 gaaacctaag ccaaaaccga agccggtgaa aaaggtacag gagcagccaa aacgcgatgt
    10921 caaacccgta gagtcgcgtc cggcatcacc gtttgaaaat acggcactgg cacgcctgac
    10981 atcaagtaca gcaacggctg caaccagcaa gccggttacc agtgtggctt caggaccacg
    11041 cgcattaagc cgtaatcagc cgcagtatcc ggcacgagca caggcattgc gcattgaagg
    11101 gcaggttaaa gttaaatttg acgtcacgcc ggatggtcgc gtggataacg tacaaatcct
    11161 ctcagccaag cctgcgaaca tgtttgagcg tgaggtgaaa aatgcgatgc gcagatggcg
    11221 ttatgagccg ggtaagccag gcagtgggat tgtggtgaat atcctgttta aaattaacgg
    11281 caccaccgaa attcagtaag cagaaagtca aaagcctccg accggaggct tttgactatt
    11341 actcaacagg taaggcgcga ggttttcctt caggatcaac cgcgacatac ttaaataatg
    11401 cttctgtcgc tttatagcgt tgcccgattg gttcagacgc tacttttttc acccacactt
    11461 caatattaat gctgaccgat gtcgtccctt tctggacaca gcgtgcatag cagcacacta
    11521 catcgccgac cgcaaccggc cgtaagaaag tcattccttc aacccgcacg gtcactacgc
    11581 gaccgtgggc aatttctttc gccagaatag cgccgccaat atccatttgt gacattaacc
    11641 aaccaccaaa gatgtcacca ttggcattgg tatcggcggg catggctaaa gtacgtaaaa
    11701 caagatcgcc ctgagggacg ttatgtgttg tagacatggt aaaaccgact taaaaggaaa
    11761 atcacaggcg cgatgctact atgattttcc tgaggagaac agaggagata cagcgccagc
    11821 cccgaaggac tggcagtctg gttaggattt atcttcctgc ggcatgtggc ggtagatata
    11881 gataccgctt aacaatgtga agattaaggt aagggcggtc agtccaaaga ctttaaagtt
    11941 gacccaaata ttttgcggca gccagaatgc gatgtagatg tttgccagac cgcaaaggat
    12001 aaagaaaaca gcccaggcca gattcagctt cgaccatacc ggttgcggca gcgtgagttc
    12061 tttacccagc atccgctgaa ttagcggctt tttcatcacc cattggctga ctaacagggc
    12121 tcccgcaaac agagcataaa tgactgtaac cttccattta ataaactcat cattgtggaa
    12181 gaacagcgtc aagccaccga agacgaccac cagaacaaaa gtgatcaggg ccatcttctc
    12241 aaccttacga aagcgaaccc agctatagat aagcacaatc gccgtggcga cgatcagcgc
    12301 cgcagtagcc gcatagatgt cataaatctt gtaaaacgcg aaaaagacaa ccagcggtaa
    12361 aaaatcaaga aactgcttca ttttacgatt ccgtaatcaa atgcttaagg ttattggcga
    12421 atcaacatat acagacggaa cagatagatg agcaatacgg ctgaaatcag gttgctcaag
    12481 gtgttcgcca gtacggcacc aatttccggg gttaatgcgg caaaagaaga ggcaaaaagc
    12541 agcaacagtg tttttgccag caaccagctc agtactgcgg gtgccaccag acgcatattc
    12601 gcccaagtca gccgcatact gctacgcatc gaggcaaaaa tgcccatttt gtcctgtacc
    12661 agcatcaccg gtgccagggc cagtaaaatg gccatgataa ttcccggaac gaccactagc
    12721 atgatgccaa tctgtactaa aagggtagtc agaaaaatca gaataaataa ctttggcaat
    12781 atcggtgcac tggcaccaat agctcgcagc gcactgactc tctgacccgc agacaccagc
    12841 tggataatta atattacgcc tccggcgaga atggcgttac cgattaatcc tgaaaaagtg
    12901 gacgccgctg aagcctgcag caaaatttgt tgctgttccg gtgacatatt ctgaaccagg
    12961 tcgaacaacc cactactgcc gctaacgggc acgccgtcat tgagctgcgc aagctgtgca
    13021 tcactgggtg agaaaacatg ccctaacacc actgtgataa acgcacatag caacgatacc
    13081 aacagaatgg tcataaattg attacggaag aaatttccgg tgtcacggta tacggactgc
    13141 gccgtgatag acatgcactc tccttgagtt ttatgcaggt gttaattagc gggcaattgt
    13201 accctggtta agcctcgggt ggcagcatca ggtcttgtat ggaaaagcat atctttgtaa
    13261 agcggaggta attgctggcc ttcaggcgtg ggcaaaccgc ggcaagtggc gatcgagtta
    13321 atatttgcgt agcgaaaata tttaaaaatt gatttaaatc acgttaacca ggattctcaa
    13381 tgcaacttct aaattaatcc agatcaataa agggtgaatt atcatatgta atgtgatcta
    13441 tgtaggatca tttgttactc caatgtaggt atattcgtca cgtttttata accataacga
    13501 cggagcggat atgaaaaagt taacagtggc ggctttggca gtaacaactc ttctctctgg
    13561 cagtgccttt gcgcatgaag caggcgaatt ttttatgcgt gcaggttctg caaccgtacg
    13621 tccaacagaa ggtgctggtg gtacgttagg aagtctgggt ggattcagcg tgaccaataa
    13681 cactcaactg ggcttgacgt ttacttatat ggcgaccgac aacattggtg tggaattact
    13741 ggcagcgacg ccgttccgcc ataaaatcgg cacccgggcg accggcgata ttgcaaccgt
    13801 tcaccatctg ccgccaacac tgatggcgca gtggtatttt ggtgatgcca gcagcaaatt
    13861 ccgtccttac gttggggcag gtattaacta caccaccttc tttgataatg gatttaacga
    13921 tcatggcaaa gaggcagggc tttccgatct cagtctgaaa gattcctggg gagctgccgg
    13981 gcaggtgggg gttgattatc tgattaaccg tgactggttg gttaacatgt cagtctggta
    14041 catggatatc gataccaccg ccaattataa gctgggcggt gcacagcaac atgatagcgt
    14101 acgcctcgat ccgtgggtgt ttatgttctc agcaggatat cgtttttaat tccgcacaaa
    14161 aacgaccccg taatatacgg ggtcaataa
//
LOCUS       DAJVUK010000108        14129 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.108, whole genome shotgun sequence.
ACCESSION   DAJVUK010000108 DAJVUK010000000
VERSION     DAJVUK010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14129
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.108"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            132..629
                     /locus_tag="OQQ57_002932"
     CDS             132..629
                     /locus_tag="OQQ57_002932"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957619.1"
                     /translation="MKLRSLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTF
                     STLVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKG
                     ITWVDKYRMRDILNVPSDDYSTYSAAYIYEQISHKRKEFISPILKELKALQSQPRIKK
                     ASGED"
     gene            630..1166
                     /locus_tag="OQQ57_002933"
     CDS             630..1166
                     /locus_tag="OQQ57_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957620.1"
                     /translation="MLKAIAGIAKYTWIYMAIFIISLMIISSSDINYVYNDFANYCTL
                     LVSVSGMVFTIMGIWLAFLYPNALQRIVNPKTIETVDFTEQLEDTRRLEAIVGSVLKS
                     SFVMITLLVVYLVKLVFFKSHLYLESQDVIKNTSLALIIAISYMQIEAVISVILANVM
                     FINDLHNKREQRDIDDQV"
     gene            1117..2127
                     /locus_tag="OQQ57_002934"
     CDS             1117..2127
                     /locus_tag="OQQ57_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957621.1"
                     /translation="MIYITSESKETLMIKYEGKMKKNIRVIPKNIHSKLRRLGNTVVA
                     GTSIAFTENQLKSGALEHLGIYFDNGVNAYETSVIPDPLQGKYSLKNVFGEEIVRKDL
                     PKETHYTEIESPNWGDSSNGTHTVRLPYEKYPRDIIPPTLIAIEINHKQPSDSHFIFN
                     FRVTRILDKQSNKFDDELLFDLNLLQENLGKCGIEDADKPISTYADTLIVSWEIFPPG
                     SKEETLARIFRGKNITSDKKNVAENRYDFFMSLEPKKIVTGNSTFSNYIGAMLEDDLV
                     VFENIEYGNAIYILYDNWDDISKLSRIDLLSGRAGSNFDRIIHSGNWKDEVRKKVAAG
                     RL"
     gene            complement(2182..3447)
                     /locus_tag="OQQ57_002935"
     CDS             complement(2182..3447)
                     /locus_tag="OQQ57_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1957622.1"
                     /translation="MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRR
                     PSDKKEDRLAFGVWPTVTLAQARAKRDQAKKLLAQGIDPKAEQKEAQAENSGAYSFET
                     IAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKH
                     DVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARL
                     AAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYR
                     GMKMKEEHIVQLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGY
                     DTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNNVRAAYIHTSEHLDERRL
                     MVQWWADYLQANKGKTITPYDFAKINKSR"
     gene            complement(3611..3695)
                     /locus_tag="OQQ57_002936"
     tRNA            complement(3611..3695)
                     /locus_tag="OQQ57_002936"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3659..3661),aa:Leu,seq:caa)
     gene            3891..4910
                     /gene="ahr"
                     /locus_tag="OQQ57_002937"
     CDS             3891..4910
                     /gene="ahr"
                     /locus_tag="OQQ57_002937"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase Ahr"
                     /protein_id="HCS1957623.1"
                     /translation="MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSD
                     LSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDAC
                     ISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
                     LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVN
                     SRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLI
                     AGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVV
                     LKADF"
     gene            5040..6542
                     /locus_tag="OQQ57_002938"
     CDS             5040..6542
                     /locus_tag="OQQ57_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HCS1957624.1"
                     /translation="MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLLSLEKQGAAHFFGEPMLDIKDWMRTDTNGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKEV
                     KAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTKQQNNPPAKGKAVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR"
     gene            complement(6703..7785)
                     /gene="lptG"
                     /locus_tag="OQQ57_002939"
     CDS             complement(6703..7785)
                     /gene="lptG"
                     /locus_tag="OQQ57_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HCS1957625.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(7785..8885)
                     /gene="lptF"
                     /locus_tag="OQQ57_002940"
     CDS             complement(7785..8885)
                     /gene="lptF"
                     /locus_tag="OQQ57_002940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HCS1957626.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRRLRASFSRKGAV"
     gene            9152..10663
                     /gene="pepA"
                     /locus_tag="OQQ57_002941"
     CDS             9152..10663
                     /gene="pepA"
                     /locus_tag="OQQ57_002941"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HCS1957627.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFEQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAILHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            10823..11266
                     /gene="holC"
                     /locus_tag="OQQ57_002942"
     CDS             10823..11266
                     /gene="holC"
                     /locus_tag="OQQ57_002942"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HCS1957628.1"
                     /translation="MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            11266..14121
                     /gene="valS"
                     /locus_tag="OQQ57_002943"
     CDS             11266..14121
                     /gene="valS"
                     /locus_tag="OQQ57_002943"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HCS1957629.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
BASE COUNT         3710 a         3435 c         3659 g         3325 t
ORIGIN      
        1 actatgtaca ctcatctatt actaatagag ttaaacatag caaaagggtt aaaaataaaa
       61 ccgagaaagg ttatataagg ctatctaata ccgatgacga agacttatat aaatatatgt
      121 acaggtttga tatgaagctc agaagcttag aaaccactca tactgagtta ggtaaactaa
      181 taccaaaaat aacacacata gttcgcaggg aaactattat tataaatcca aatgatgcac
      241 gagctgattg gttaaagacc tttagcactc tcgttccatt tgtgtccgga aagaaaaatg
      301 ccaaaacaag acaaattgaa ataaaagcag aagcaaaacc atccttgaat gaagttcaag
      361 aaatcattga aaagtattcg gctgaggata gagaaaaacg tctttgggac aatgttggat
      421 ttgctacaga caagggtata acttgggtgg ataaatatag aatgcgtgat attctcaatg
      481 tcccttctga cgactattca acatattccg ccgcatatat ttacgaacaa atatcacaca
      541 aaagaaaaga atttatttcc cctatattaa aagaattaaa agcattacaa tctcaaccaa
      601 gaataaagaa agcatctgga gaggattgaa tattgaaagc tatagcaggc atagccaaat
      661 acacatggat atacatggcg atattcatta tatcgctgat gattatttcg tcatccgata
      721 ttaactatgt gtataacgat tttgccaact attgcactct tctcgtatca gtttctggaa
      781 tggtttttac tattatggga atttggttag cgtttcttta cccaaatgct ttgcagcgta
      841 ttgtgaaccc caaaactata gaaaccgttg atttcaccga acaactggaa gatacaagaa
      901 gattagaagc aatagttgga agtgttctaa aatcatcttt cgttatgatt actttacttg
      961 ttgtatactt agttaaacta gtgtttttca aaagtcatct ttatttagag agccaagatg
     1021 taataaaaaa cacatcttta gcattaatta ttgctatttc gtacatgcag attgaggcag
     1081 taattagcgt aatacttgca aatgttatgt ttatcaatga tttacataac aagcgagagc
     1141 aaagagacat tgatgatcaa gtatgaggga aaaatgaaaa agaatatacg tgttatacct
     1201 aaaaatattc atagcaagtt aagaaggctt ggtaatacag ttgttgctgg cacttctatt
     1261 gcatttacgg aaaaccaatt aaaaagtgga gcattagagc accttggaat atattttgat
     1321 aatggtgtta atgcttatga gacgtcggtc ataccagatc cattgcaggg taaatattca
     1381 cttaaaaatg tttttggtga agaaattgtc agaaaagacc tcccaaaaga aactcattac
     1441 actgaaattg agtcacctaa ctggggtgat agctctaatg gtacacatac tgttagatta
     1501 ccttacgaga aatatcccag agacattata ccaccaacac tcatagccat tgaaattaat
     1561 cacaaacagc cctcggacag ccatttcata tttaacttca gagtaactag aattttagac
     1621 aaacaatcaa ataagtttga tgatgaatta ttatttgatt taaatcttct tcaagaaaat
     1681 cttggtaaat gtggaattga ggatgctgat aaacccatat cgacttatgc tgatacactt
     1741 atagtctcat gggaaatatt tccaccaggt agtaaagaag aaactttagc aagaattttt
     1801 agaggtaaaa atatcacttc cgacaagaaa aatgtcgctg aaaatagata tgacttcttc
     1861 atgagtcttg aacctaaaaa aatcgtcaca ggaaacagca cgttcagtaa ttatattgga
     1921 gctatgctgg aggacgattt ggttgtattt gaaaacatag aatatggtaa tgctatatat
     1981 atcctctatg ataactggga tgatatcagc aagctatctc gaattgactt attatcagga
     2041 agagcaggaa gtaatttcga tagaataatc catagtggca attggaaaga tgaagtacga
     2101 aaaaaagttg ctgctggaag attatgatca aagtgtttaa tacagaaata aacgcctata
     2161 tattataggc gtttattttc actatcgact tttgtttatt ttagcaaaat cataaggtgt
     2221 tattgttttg cccttatttg cttggagata atcagcccac cattgaacca tcaatcgacg
     2281 ttcatccaaa tgttcagagg tgtgaatata agcagcacgt acattattac gctctgaatg
     2341 gctcaactgt cgttctatag catcttcact ccataatccg gactcgccca acgcaccacg
     2401 ggccatcgtt ctaaacccgt gcccgcaaac ttcggttttc gtgtcatagc ccatcgcacg
     2461 caatgcgcta tttaccgtgt tttcgctcat aaccttagtt gcgtcatgat cacccggaaa
     2521 aagcagctct ttatctccac taatctgctt taactggttt agcaaaatca tcgcctgccg
     2581 actaagctga acgatatgct cctctttcat cttcatgcca cggtacgagt aacgcacacc
     2641 tttaatttct tctcgttttg caggtactcg ccagagagat ttatcgaagt cgaactcatc
     2701 ccaacgcgcg aaacgtaact cactggaacg cacaaaagtt agtaaggaaa gctcaaccgc
     2761 gatccgcgtc attacacggc cacgatatgc agcaagacga gcaagaaact cagggaaccg
     2821 gctggagggc aaagcggggt aatgtcgcgc tttggttgtc gatagcgcac cggccatatc
     2881 actggctgga tttgagtcga tgtaatcgtt ctgtactgca taacgcataa tagccgtgac
     2941 acgctgctga aggcgctgtg caacgtcatg cttaccactg gcatcaactt ttttaatcgg
     3001 ggctaatagg tggctagttt tgagctgacg gatgtcagat gaaccaatat gaggaaagat
     3061 ataaagctca agataacgta gaacgcgtga tcggtgatct tcactccagc gcttattact
     3121 agcatgccat tcacgagcga tagtttcgaa agaatatgcc cccgaattct cggcctgagc
     3181 ttctttctgt tcggcttttg gatcaatgcc ctgcgctaac agctttttag cttgatcgcg
     3241 ctttgctctt gcctgagcaa gcgtcacagt aggccaaaca ccaaacgcga gacgatcctc
     3301 ttttttgtca gagggacgtc tgtatttcat gcgccagtat ttggaacctt tggccgaaac
     3361 ctcaagatac aaaccaccac catcggccat tttgtaggtt ttgtcttttg gctttgcggt
     3421 ctcgacctgt ctggcgttga gcttcatttg ggggcacatt tctaatcgaa gttaagatgc
     3481 ccccaattat gcccccaatg atatccggat ttcaacggac aacctcggaa gacgcaggac
     3541 gaaaaaatcg ctgcaagcat tgattttaaa gggatatttg gactttctcg gatggtcttg
     3601 gaagtaagaa tggtgccgaa ggccggactc gaaccggcac gtatttctac ggttgatttt
     3661 gaatcaactg cgtctaccga tttcgccact tcggcactga agaggtatgc ggaaaacgtt
     3721 gtggattata cctgtcgcac gccaccatgc aagcgccagc ttgctcgcac ctcgctaagt
     3781 gctgaaattt tcagcattgc acacagcgat gtgtaacctt tgtcacactc caggcacccc
     3841 gccctgccat gctctacact tcccaaacaa caccagagaa ggaccaaaaa atgtcgatga
     3901 taaaaagcta tgccgcaaaa gaagcgggcg gcgaactgga agtttatgag tacgatcccg
     3961 gtgagctgag gccacaagat gttgaagtgc aggtggatta ttgcgggatc tgccattccg
     4021 atctatcgat gatcgacaat gaatggggat tttcacaata tccgctggtt gccgggcatg
     4081 aggtgattgg gcgcgtggtg gcactcggga gcgccgcgca ggataaaggt ttgcaggtcg
     4141 gtcagcgtgt cgggattggc tggacggcgc gtagctgtgg tcactgcgac gcctgtatta
     4201 gcggtaatca gatcaactgc gagcaaggtg cggtgccgac gattatgaat cgcggtggct
     4261 ttgccgagaa gttgcgtgcg gactggcaat gggtgattcc actgccagaa aatattgata
     4321 tcgagtccgc cgggccgctg ttgtgcggcg gtatcacggt ctttaaacca ctgttgatgc
     4381 accatatcac tgctaccagc cgcgttgggg taattggtat tggcgggctg gggcatatcg
     4441 ctataaaact tctgcacgca atgggatgcg aggtgacggc ctttagttct aatccggcga
     4501 aagagcagga agtactggcg atgggtgccg ataaagtggt gaatagccgc gatccgcagg
     4561 cactgaaagc cctgtcgggg cagtttgatc tcattatcaa tactgtgaac gtcagcctcg
     4621 actggcagcc ttattttgag gcgctgacct atggcggtaa tttccatacg gtcggtgcgg
     4681 ttctcacgcc gctgtctgtt ccggccttta cgttaattgc gggcgaccgc agcatctctg
     4741 gttctgctac cggcacgcct tatgagctgc gaaagctgat gcgctttgcc gcccgtagca
     4801 aggttgcgcc gaccaccgaa ctgttcccga tgtcgaaaat taacgatgcc atcaagcatg
     4861 tgcgcgacgg taaggcgcgt taccgcgtgg ttctgaaagc cgacttctga tccctttgcc
     4921 gggtgcctgt cgcccggcac ttaaatctct ttggaaggcg tctcgcaatc tgctgaattt
     4981 agcggtgaag agtgcgcagc cgttgcctat actccaggca ggaaactgga ggaaatctca
     5041 tgagcgaacc cctattaatt gcccgcacgc cggacacaga acttttttta ctgccgggaa
     5101 tggctaaccg tcacgggctg attactggcg caacggggac gggtaaaacc gttacgctgc
     5161 aaaaactggc agagtcattg tcggaaatcg gcgtgccggt gtttatggct gatgtgaaag
     5221 gcgatctgac cggtatcgcg caggcaggaa cggcgtcgga aaaactgctc acaaggctta
     5281 aaaatatcgg cgtcaatgac tggcaaccgc atgctaatcc ggtggtggtg tgggatatct
     5341 ttggcgagaa aggccatccg gtgcgggcga cggtttcaga cctggggccg ctgttgctgg
     5401 cgcggctgtt gaatctcaac gatgtgcaat ctggcgtgct gaatatcatc ttccgtattg
     5461 ctgacgatca gggattgttg ctgctcgact ttaaagatct gcgggcgatt acccagtaca
     5521 tcggcgataa cgccaaatct ttccagaatc agtacggtaa tatcagtagc gcatcggttg
     5581 gtgccatcca gcgcggttta ctgtcgctgg aaaagcaagg tgcggcgcat ttctttggcg
     5641 agccgatgct ggatatcaaa gactggatgc gcaccgatac caacggtaaa ggcgttatca
     5701 atatcctcag cgccgagaag ctttatcaga tgccgaaact gtacgccgcc agcctgctgt
     5761 ggatgctttc agagttgtat gaacaattgc cggaagcggg cgatctggag aaaccaaaac
     5821 tggtgttttt cttcgacgag gcacatctgc tgtttaacga tgcaccgcag gtactgctgg
     5881 ataagattga gcaggtaata aggcttattc gctcaaaagg cgtgggcgtc tggttcgttt
     5941 cgcaaaaccc gtctgatatt ccggataatg tgctcgggca gctcggtaat cgcgttcaac
     6001 acgctttgcg ggcttttacg cccaaagatc agaaagaggt aaaagctgcg gcgcaaacca
     6061 tgcgggccaa tccggcgttt gataccgaaa aggcaatcca ggaactgggg accggcgagg
     6121 cgttaatctc gtttctcgat gcaaaaggaa gtccttctgt ggtggaacgg gcgatggtga
     6181 ttgcgccttg ttcgcggatg ggaccggtga cggaagatga gcgcaatggc ttgattaacc
     6241 actccccggt gtatggcaag tacgaggatg acgtggaccg ggaatccgcc tatgagatgt
     6301 tgcaaaaagg ctttcaggcc agtaccaagc agcaaaataa tcctcccgcg aaagggaaag
     6361 cggtggcggt ggatgacggt attcttggtg gattgaagga tattttgttt ggcactaccg
     6421 gaccacgcgg cgggaagaaa gatggtgtgg tgcaaacaat ggcgaaaagc gccgcccgcc
     6481 aggtgacgaa tcagattgta cgtgggatgt tggggagttt gctgggggga agaagaaggt
     6541 aagtcaggcg agatttgtct ttgcctgatg cgacgctggc gcgtcttatc atgcctacac
     6601 cactgcaata tattggattt tcatgatttt tcaggcatga acgaagcaca ctttgctaac
     6661 aataataaag ggagctttcg ctccctttat tcgttcattc ggttacgatt ttctcattaa
     6721 cagccacagg ctgattaaga agaagctggc gcttggcaac agtgcgccga tgatcggcgg
     6781 gatgccataa accaacgtca gcgggccgaa gatctggtcc agtacgtaga agacaaaacc
     6841 gaagctgata ccggtgacca cacgcacgcc catcggtacg ctacgcagtg ggccaaagat
     6901 gaacgacagc gccatcagca tcatcaccgc cacggatagc ggctggaaga ttttgctcca
     6961 catattgagc tgataacgtc cggcatcctg accgctcgac ttcagatact tcacgtagtt
     7021 gtgcaaaccg ctgattgaga gtgcatccgg gtccagcgcc accacgccca gtttgtccgg
     7081 cgtgaggttg gttttccagg tgccgctcac cgtctgcgaa ccggtgatct gtttcggatt
     7141 ggtcagatca gattcatcaa cctgcgacag acgccagact ttatgttccg ggtcaaactt
     7201 cgcagtagcg gcatagcgta cggattgcag acgacgattc tcgttaaagg cataaatact
     7261 gatgccacct aactcttcgt cacctttaac ccgctcaatg taaacgaagt tgttgccatc
     7321 tttcgcccat aagccttgct gggtagagag caacgagccg ccgtacatcg cctgcgcacg
     7381 gtagttacgc gccatctgct cgccctgcgg cgcgacccat tcaccaatcg ccatcgtcag
     7441 caagaccagc ggaatggcgg ttttcatcac cgacagcgca acctgcatac gggtgaaacc
     7501 agaagcctgc atcaccacca gttcgctgcg ctgcgccagc atcccaagac caagcaacgc
     7561 cccaagcaga gccgccatcg ggaagaatgt ttgcacatct ttcggcacgc tcagcaaggt
     7621 atacattcct gcgcctaacg cgtcgtaact cccctgcccg gcttttttca gctgatcgac
     7681 aaatttgata atgcccgaca gcgacaccag catgaacagc gtcatcatga tggtggtgaa
     7741 aatagtttta ccgatatagc ggtcaagtac gccaaaaggt tgcatcacac cgctccttta
     7801 cgcgaaaaac tggcgcgcag gcggcggacc ggcacggtgt cccaaaggtt gagaacaatc
     7861 gccaaagcca gataaatcag gttaacggtc cacatccaca gcgtcgggtc cagcttacct
     7921 ttaccgccgt tcgatttcag ggaggtctgg atcaggaaga aaagtagata cagcagcatg
     7981 gctggcagca tcgatagtac gcgtccctga cgcgggttaa ccacgctcag cggtacgacc
     8041 ataagtgcca tcataaacac ggtgaatacc aacgtgatac gccagttcag ttctgcgcgg
     8101 gcacgatcgg tgtcagtgtt ccacaatgta cgcatgtcca tctggtcggt atcgttcggg
     8161 tcgagcgcta ccgcctggtg accaatgatc gcctgataat cctggaagtc cgtaatgcgg
     8221 aaatcacgta acagtgcagt gccttcgaag cgcgttccct ggttgagagt gacgacctgg
     8281 gagccgtcgc gcagctgggt taaatgtccg gaatcggcca ccaccacaga aggacgtgca
     8341 ttaccttttg gtcgaatttg cgcgaggaac acatctttga aatcgctgcc gtcaacgctt
     8401 tcgatgaaca gcaccgagct gccattagtc gcttgctgga attgcccttg cgccagcgcc
     8461 gccatgccag ggttcgcttt cgcttctgct aacacttcat cctgatgacg cgatgaccac
     8521 ggtcccgccc acatcacgtt aaccgccgcg acgattgcag tgaataccgc aaggatcatt
     8581 gccgctttca ccagaaccgc tttgctcagg ccgcaggcat gcattaccgt aatttcactt
     8641 tcggtataca gtttgcccag cgtcatcagc agcccgagga acaggcttaa tggcaggata
     8701 agctgcgcca tttccggcac gcccaacccg agaagggaga gcaccagatt cgccggaata
     8761 tcgccgtcaa ccgctgcgcc gaggatcctc actaactttt gacagaagaa gatcaaaagc
     8821 aagatgaaga gtatcgccag ctggcttttg agcgtctccc gcaccagata tcttatgatt
     8881 atcactttaa atacgcccgt aaaaactcgt cttttgcagg attttagctt gtttcatggc
     8941 ttaaacgtca tttattctct tgagtcgtcg aaatcgtcgc taagataatt atactcaacg
     9001 gattcacctc tcagattttg ttctgacgtg ccaatgccgt aataacgtta agattaacac
     9061 gaagtcatcg caacagcgga catgagttac gaaagcttgc aattctatct gtagccaccg
     9121 ccgttgtctt taagattcag gagcgtagtg catggagttt agtgtaaaaa gcggtagccc
     9181 ggagaaacag cggagtgcct gcatcgtcgt gggcgtcttc gaaccacgtc gcctttctcc
     9241 gattgcagaa cagctcgata aaatcagcga tgggtacatc agcgccctgc tacgtcgggg
     9301 cgaactggaa ggaaaaccgg ggcagacatt gttgctgcac catgttccga atgtactttc
     9361 cgagcgaatt ctccttattg gttgcggcaa agaacgtgag ctggatgagc gtcagtacaa
     9421 gcaggttatt cagaaaacca ttaatacgct gaatgatact ggctcaatgg aagcggtctg
     9481 ctttctgact gaactgcacg ttaaaggccg taacaactac tggaaagtgc gtcaggctgt
     9541 cgagacggca aaagagacgc tctacagttt cgaacagctg aaaacgaaca agagcgaacc
     9601 gcgtcgtccg ctgcgtaaaa tggtgttcaa cgtgccgacc cgccgtgaac tgaccagcgg
     9661 tgagcgcgcg atcctgcacg gtctggcgat tgccgccggg attaaagcag caaaagatct
     9721 cggcaatatg ccgccgaata tctgtaacgc cgcttacctc gcttcacaag cgcgccagct
     9781 ggctgacagc tacagcaaga atgtcatcac ccgcgttatc ggcgaacagc agatgaaaga
     9841 gctggggatg cattcctatc tggcggtcgg tcagggttcg caaaacgaat cgctgatgtc
     9901 ggtgattgag tacaaaggca acgcgtcgga agatgcacgc ccaatcgtgc tggtgggtaa
     9961 aggtttaacc ttcgactccg gcggtatctc gatcaagcct tcagaaggca tggatgagat
    10021 gaagtacgat atgtgcggtg cggcagcggt ttacggcgtg atgcggatgg tcgcggagct
    10081 acaactgccg attaacgtta tcggcgtgtt ggcaggctgc gaaaacatgc ctggcggacg
    10141 agcctatcgt ccgggcgatg tgttaaccac catgtccggt caaactgttg aagtgctgaa
    10201 taccgacgct gaaggccgcc tggtactgtg cgacgtgtta acttacgttg agcgttttga
    10261 gccggaagcg gtgattgacg tggcgacgct gaccggtgcc tgcgtgatcg cgctgggtca
    10321 tcacattacc ggtctgatgg cgaaccataa tccgctggcc catgaactga ttgccgcgtc
    10381 tgaacaatcc ggtgaccgcg catggcgctt accgctgggt gacgagtatc aggaacagct
    10441 ggagtccaat tttgccgata tggcgaacat tggcggtcgt cctggtgggg cgattaccgc
    10501 aggttgcttc ctgtcgcgct ttacccgtaa gtacaactgg gcgcacctgg atatcgccgg
    10561 aaccgcctgg cgttctggta aagcaaaagg cgccaccggt cgtccggtgg cgttgctggc
    10621 acagttcctg ttaaaccgcg ctgggtttaa cggcgaagag taattgcgtc aggcaaggct
    10681 gttattgccg gatgcggcgt gaacgcctta tccgacctac acagcactga actcgtaggc
    10741 ctgataagac acaacagcgt cgcatcaggc gctgcggtgt atacctgatg cgtatttaaa
    10801 tccaccacaa gaagccccat atatgaaaaa cgcgacgttc taccttctgg acaatgacac
    10861 caccgtcgat ggcttaagcg ccgttgagca actggtgtgt gaaattgccg cagaacgttg
    10921 gcgcagcggt aagcgcgtgc tcatcgcctg tgaagatgaa aagcaggctt accggctgga
    10981 tgaagccctg tgggcgcgtc cggcagaaag ctttgttccg cataatttag cgggagaagg
    11041 accgcgcggc ggtgcgccgg tggagatcgc ctggccgcaa aaacgcagca gcagcccgcg
    11101 cgatatattg attagtctgc gaacaagctt tgcagatttt gccaccgctt tcacagaagt
    11161 ggtagacttc gttccttatg aagattctct gaaacaactg gcgcgcgaac gctataaagc
    11221 ctaccgcgtg gctggtttca acctgaatac ggcaacctgg aaataatgga aaagacatat
    11281 aacccacaag atatcgaaca gccgctttac gagcactggg aaaagcaggg ctactttaag
    11341 cctaatggcg atgaaagcca ggaaagtttc tgcatcatga tcccgccgcc gaacgtcacc
    11401 ggcagtttgc atatgggtca cgccttccag caaaccatca tggataccat gatccgctat
    11461 cagcgcatgc agggcaaaaa caccctgtgg caggtcggta ctgaccacgc cgggatcgct
    11521 acccagatgg tcgttgagcg caagattgcc gcagaagaag gtaaaacccg tcacgactac
    11581 ggccgcgaag ctttcatcga caaaatttgg gaatggaaag cggaatccgg cggcacgatt
    11641 acccgtcaga tgcgccgtct cggcaactcc gtcgactggg agcgtgaacg cttcacgatg
    11701 gacgaaggcc tgtccaatgc ggtgaaagaa gttttcgttc gtctgtataa agaagacctg
    11761 atttaccgtg gcaaacgcct ggtaaactgg gatccgaaac tgcgcaccgc tatctctgac
    11821 ctggaagtgg aaaaccgcga atcgaaaggt tcgatgtggc acatccgcta tccgctggct
    11881 gacggcgcga aaaccgcaga cggtaaagat tatctggtgg ttgcgactac ccgtccggaa
    11941 accctgttgg gcgataccgg cgtggccgtt aacccggaag atccgcgtta caaagacctg
    12001 attggcaaat atgtcattct accgctggtt aaccgtcgta ttccgatcgt tggcgacgaa
    12061 cacgccgaca tggaaaaagg caccggctgc gtgaaaatca ctccggcgca cgactttaac
    12121 gactatgaag tgggtaaacg tcacgcgctg ccgatgatca acatcctgac ctttgacggc
    12181 gatatccgtg aaagcgccca ggtgttcgat accaaaggta acgaatctga cgtttattcc
    12241 agcgaaatcc cggcagagtt ccagaaactg gagcgttttg ctgcacgtaa agcagtcgtt
    12301 gctgcggttg acgcgctcgg cctgctggaa gaaattaaac cgcacgacct gaccgtgcct
    12361 tacggcgacc gtggcggcgt agttatcgaa ccgatgctca ccgaccagtg gtacgtgcgt
    12421 gccgatgtac tggcgaaacc ggcggttgag gcggttgaga acggcgacat tcagttcgta
    12481 ccgaagcagt acgaaaacat gtacttctcc tggatgcgcg atattcagga ctggtgtatc
    12541 tctcgtcagc tgtggtgggg tcaccgtatc cctgcatggt acgacgaagc aggtaacgtt
    12601 tatgttggcc gcaacgaaga agaagtgcgc aaggaaaata acctcggtgc cgacgttgcc
    12661 ctgcgtcagg acgaagacgt tctcgacacc tggttctctt ctgcgctgtg gaccttctct
    12721 accctaggct ggccggaaaa caccgacgca ctgcgccagt tccacccaac cagcgtgatg
    12781 gtatctggtt tcgacatcat tttcttctgg attgcccgca tgatcatgat gaccatgcac
    12841 ttcatcaaag atgaaaatgg caaaccgcag gtgccgttcc acaccgttta catgaccggc
    12901 ctgattcgtg acgacgaagg ccagaagatg tccaaatcca agggtaacgt tattgacccg
    12961 ctggatatgg ttgacggtat ttcgctgccg gaactgctgg agaaacgtac cggcaatatg
    13021 atgcagccgc agctggcgga caaaatccgt aagcgcaccg agaaacagtt cccgaacggc
    13081 attgagccgc acggcaccga tgccctgcgc ttcaccctgg cggcgctggc ttctaccggt
    13141 cgtgacatca actgggatat gaaacgcctg gaaggctacc gtaacttctg taacaagctg
    13201 tggaacgcca gccgctttgt gctgatgaac acggaaggtc aggattgcgg cttcaacggt
    13261 ggtgaaatga cgctgtcgct ggcggaccgc tggattctgg cagagttcaa ccagaccatc
    13321 aaagcgtacc gcgaagcgct ggacagcttc cgcttcgata tcgctgcagg cattctgtat
    13381 gagttcacct ggaaccagtt ctgcgactgg tatctggagc tgactaagcc ggtaatgaac
    13441 ggtggaaccg aagccgaact gcgcggtact cgccatacgc tggtgactgt actggaaggt
    13501 ctgctgcgcc tcgcgcatcc gatcattccg ttcatcaccg aaaccatctg gcagcgtgtg
    13561 aaagtacttt gcggtatcac tgccgacacc atcatgctgc agccgttccc gcagtacgat
    13621 gcatctcagg ttgatgaagc cgcactggct gacaccgagt ggctgaaaca ggcgatcgtt
    13681 gcggtacgta acatccgtgc agaaatgaac atcgcgccgg gcaaaccgct ggagctgctg
    13741 ctgcgtggtt gcagcgcgga tgcagaacgt cgcgtaaatg aaaaccgtgg cttcctgcaa
    13801 accctggcgc gtctggaaag catcaccgtg ctgcctgccg atgacaaagg tccggtttcc
    13861 gttacgaaga tcatcgacgg cgcagagctg ctgatcccga tggctggcct catcaacaaa
    13921 gaagatgagc tggcgcgtct ggcgaaagaa gtggcgaaga tcgaaggcga aatcagccgt
    13981 atcgagaaca agctggcgaa tgaaggcttt gtcgcccgcg caccggaagc ggtcatcgcg
    14041 aaagagcgtg agaagctgga aggctatgca gaagcgaaag cgaagctgat tgaacagcag
    14101 gctgttatcg ccgcgctgta atcaaaaca
//
LOCUS       DAJVUK010000109        14112 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.109, whole genome shotgun sequence.
ACCESSION   DAJVUK010000109 DAJVUK010000000
VERSION     DAJVUK010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14112
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.109"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..342)
                     /locus_tag="OQQ57_002944"
     CDS             complement(<1..342)
                     /locus_tag="OQQ57_002944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCS1957630.1"
                     /translation="MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRR
                     TLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIDTL
                     NIGGMAWRPGKK"
     gene            complement(342..749)
                     /locus_tag="OQQ57_002945"
     CDS             complement(342..749)
                     /locus_tag="OQQ57_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sorbose transporter subunit IIA"
                     /protein_id="HCS1957631.1"
                     /translation="MVNAIFCAHGKLACAMLESVQMVYGDARVEAVEFVPGENAGDIV
                     AKLEKLVSIHNQDEWLIAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQ
                     DSMNVDELCEHLTQIAKQTCVVWKQLATAEEDF"
     gene            complement(759..1565)
                     /locus_tag="OQQ57_002946"
     CDS             complement(759..1565)
                     /locus_tag="OQQ57_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1957632.1"
                     /translation="MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGG
                     DGQYEGHKGYQFWPTDISSAKEVNHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAP
                     AGQYELNEAAFEKMVNINQKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSC
                     YAATKAALNSFTRSWSKELGKHGIRVVGIAPGILEKTGLRTPEYEEALVWTRNITVEQ
                     LREGYTKNAIPIGRAGRLAEVADFVCYLLSERASYITGVTTNIAGGKTRG"
     gene            complement(1635..2582)
                     /locus_tag="OQQ57_002947"
     CDS             complement(1635..2582)
                     /locus_tag="OQQ57_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HCS1957633.1"
                     /translation="MENSDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKR
                     GRDQGIVTIAINYDYNENLWLEQQLKQKFGLKDVVVVSGNDEDEETQLAMMGLHGAQL
                     LDRLLEPGDIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGKLESRYHVNTLT
                     YSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYWDNLDVALVGIGSPAIR
                     DGANWHAFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQAR
                     YSIGIAMSEEKYSGIVGALRGKYINCLVTNSSTAELLLK"
     gene            2930..3802
                     /gene="rluF"
                     /locus_tag="OQQ57_002948"
     CDS             2930..3802
                     /gene="rluF"
                     /locus_tag="OQQ57_002948"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HCS1957634.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            complement(3935..4207)
                     /locus_tag="OQQ57_002949"
     CDS             complement(3935..4207)
                     /locus_tag="OQQ57_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HCS1957635.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKK
                     EYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR"
     gene            complement(4459..5808)
                     /gene="lysC"
                     /locus_tag="OQQ57_002950"
     CDS             complement(4459..5808)
                     /gene="lysC"
                     /locus_tag="OQQ57_002950"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HCS1957636.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNDGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE"
     gene            6333..7982
                     /gene="pgi"
                     /locus_tag="OQQ57_002951"
     CDS             6333..7982
                     /gene="pgi"
                     /locus_tag="OQQ57_002951"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HCS1957637.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG"
     gene            8444..8686
                     /locus_tag="OQQ57_002952"
     CDS             8444..8686
                     /locus_tag="OQQ57_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957638.1"
                     /translation="MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            8800..9438
                     /locus_tag="OQQ57_002953"
     CDS             8800..9438
                     /locus_tag="OQQ57_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HCS1957639.1"
                     /translation="MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKILLGGDNLI
                     EVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDET
                     LVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ"
     gene            9435..10172
                     /locus_tag="OQQ57_002954"
                     /pseudo
     CDS             9435..10172
                     /locus_tag="OQQ57_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
     gene            10172..12268
                     /locus_tag="OQQ57_002955"
     CDS             10172..12268
                     /locus_tag="OQQ57_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HCS1957640.1"
                     /translation="MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETKLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMG
                     MADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(12315..12593)
                     /locus_tag="OQQ57_002956"
     CDS             complement(12315..12593)
                     /locus_tag="OQQ57_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957641.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            12594..12737
                     /locus_tag="OQQ57_002957"
     CDS             12594..12737
                     /locus_tag="OQQ57_002957"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957642.1"
                     /translation="MFQRNIVDFSRIAGGWESPEWVIFELPAWVRFVLPDAPPGAAYP
                     AYG"
     gene            12863..13261
                     /gene="psiE"
                     /locus_tag="OQQ57_002958"
     CDS             12863..13261
                     /gene="psiE"
                     /locus_tag="OQQ57_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HCS1957643.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHK
                     SPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            complement(13305..>14112)
                     /locus_tag="OQQ57_002959"
     CDS             complement(13305..>14112)
                     /locus_tag="OQQ57_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HCS1957644.1"
                     /translation="PRWLMSRGKQEQAESILRKIMGNTLATQAVQEIKHSLDHGRKTG
                     GRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVIN
                     LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF
                     AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHN
                     GFSYWIYGCMGVLAALFMWKFAPETKGKTLEELEALWEPETKKTQQTATL"
BASE COUNT         3415 a         3660 c         3629 g         3408 t
ORIGIN      
        1 ttttttaccg ggccgccagg ccatgccgcc aatatttagg gtgtctattt ttaccccttg
       61 gcgaaccatc gctaaggcat cctgtgggcg agtgaaaaga taaaaaacgg tttcgtcctg
      121 atattgcggg ttgtgataaa cagcgacggc tttttcaata ttgaccacgt taaccttcat
      181 tcccggtggc gcagcctgac gcaataatgt ccggcgaact tcatcgttat aaacttcgtc
      241 attgcagata ataatgcgct gggcgttagc cactttcgac cagacggtag tgacctgacc
      301 gtggatcagg cggtcatcaa tgcgggcgag cgtaatgttc atcagaaatc ctcctctgcc
      361 gttgccagtt gtttccagac aacgcaggtt tgctttgcga tttgcgtcag gtgttcacac
      421 agttcatcaa cattcatgct gtcctggtta tcaaccagtt cgagcgccag cggcagagaa
      481 aggccgctga ttacccgcag acgaggattg cgcatcgcaa gcatcgctgc cgcattccac
      541 gggctgccgc actgtaaatc cacggcaatc agccactcat cttgattgtg aatgcttact
      601 aacttttcca gctttgctac gatgtctccg gcgttctcgc cgggcacaaa ttcaactgcc
      661 tcgaccctgg cgtcgccgta caccatctga accgattcca gcatggcgca agctaatttg
      721 ccgtgggcgc aaaaaatggc attgaccata aagcctcctt agccgcgcgt tttgccgccc
      781 gcaatgttag tggttactcc ggtgatatag ctggcgcgtt cagacagcag ataacaaaca
      841 aaatcagcga cttctgctaa tcttccggcg cgcccaatag gaatggcgtt tttggtatag
      901 ccttcacgca gctgctcgac ggtgatattg cgcgtccaca ccagcgcttc ttcatattcc
      961 ggcgtgcgca gtcctgtttt ttccagaatc cccggcgcga taccgaccac acggataccg
     1021 tgtttaccca attctttcga ccaggatcgc gtgaagctat taagcgcggc tttggtagcg
     1081 gcgtaacagc tttggccttc tgagccttcc agtccacttt ctgaggaaac attcacaatc
     1141 acgccatcat gttgtttgac catctgtcgc gccaccgcct gcgacatcag aaaaacgcct
     1201 ttctggttga tattgaccat tttttcgaat gcagcttcgt tgagttcata ctgcccggca
     1261 ggcgctttct catcgaccag cagacgcggg aaattgaccc cggcgttatt gaccagaccg
     1321 tcgatgcgac caaaacgctg gataatttcc gctaccgtat gatttacctc tttggcgctg
     1381 gaaatatcgg tcggccaaaa ctgatagcct ttatgacctt catattgacc atcgccaccg
     1441 tgaatatcta ccatctgtac gtttgcgcct tgtgctaata attcctctac aatcgccaga
     1501 ccaataccgg atgcgccgcc ggtgacaata atgattttat cctgcaaatt taaccacgtt
     1561 tgcataacag actcctgatt ttagataata gggccccgcc gtaattttta ttacgctaaa
     1621 catcgggaag atttttattt cagtaatagt tcagctgtgc tgctattcgt taccagacaa
     1681 ttaatatatt ttccacgcag tgcaccaaca attccgctgt atttttcttc actcatggca
     1741 atgccaatgg aatatcgtgc ctgctttaat ttattcattt cgatagagag tgttttttcg
     1801 ctcatattcg tttcaaccat tgcgccgtga atatcaaaaa agcgcgagca aatatcgcca
     1861 gcaacctggc gggcattcag gtcgtcactc tcttcaccac cataaaacgc atgccagtta
     1921 gcgccgtcgc gaatggccgg tgagccaatt cccaccaggg cgacatccag attatcccag
     1981 taggcagaga tggttttaaa gtgctgagac tgcatgatcc cattacgaat taatgggtta
     2041 tccagcagag ccggaaaatc cgcgagatgc gattcccctt tcagcttcgc tgccgcgctg
     2101 taggttaatg tgtttacatg atagcggctt tcgagtttac cggacggtcc gccaataatt
     2161 ggtacgcaga ttaactgccg cgattgcccc gcctgcggca agttttcaac cagtgcgctc
     2221 accgcgcgac cccaggaaaa accgacaata tcgccaggct ccagcaagcg atccagcagt
     2281 tgcgcgccgt gtaaccccat catcgccagt tgagtctctt catcctcatc atttcccgac
     2341 accaccacaa cgtctttcag gccaaacttt tgcttcagtt gctgctccag ccagagattt
     2401 tcgttgtagt catagttgat ggcgatggtg acaattccct gatcgcggcc tcgtttaagc
     2461 aagcggctga tggtggtgcg gtaaataccc agttcgcgcg cgatttgcgc ctgcgtcata
     2521 tcctgttcgt aatagagttg ggcaatcttc acaatcaaac ggatatcgtc actgttttcc
     2581 attgccgcct cctggttctg cacatttgtg caaatacgct ttctcaccgc ttgatctgat
     2641 ataaccccat catgagggcc tttcaaagcg atttttcact ctttgcatgg ggagatatag
     2701 cgctttctct tgcacatttg tttctctgcg tagtagtcat cagcacaggt gtgcagcgat
     2761 tcgtaatatg ttgattatcc ttattttgcc aggcaaattt gcatcgtact tccggagaca
     2821 cttttgtgat aaaaggcgtg gcagatcaca tttaatttcg acgttgccgc ataaccctgt
     2881 ttttccccgc taagaggtac ggtatattcc gcgttttaca ggagaattta tgctgcccga
     2941 ctcatcagtc cgtttaaata aatacatcag cgaaagcgga atttgctcac gccgcgaagc
     3001 ggatcgctat atcgagcaag gcaatgtgtt ccttaatggc aagcgagcca ccattggcga
     3061 tcaggtgaaa cccggcgaca ttgtgaaagt aaacggtcag ttgattgagc ctcgggaagc
     3121 cgaagatttg gtacttatcg ccctgaacaa gcccgtcggt attgtcagca ccaccgaaga
     3181 tggcgagcgc gataacattg tcgatttcgt taaccacagc aaacgcgtgt tcccgattgg
     3241 ccgcctggat aaagactccc aggggctgat tttcctcacc aatcacggcg atctggtgaa
     3301 taagatcctc cgtgcgggta acgatcatga gaaagagtat ctggtgacgg tcgataaacc
     3361 gattaccgat gaatttattc gtggtatggg ggcgggggtg ccgatcctcg ggacggtgac
     3421 gaaaaagtgc aaagtcaaaa aagaagcgcc gtttgtcttc cgcattaccc tggtgcaggg
     3481 gctgaaccgt cagatccggc gcatgtgcga gcatttcggc tatgaagtga aaaagctgga
     3541 acgtacgcgc attatgaacg tcagcttaag cggcattccg ctgggggagt ggcgcgattt
     3601 aaccgacgat gagttaatcg acctctttaa gctcatcgaa aattcctctt ccgaggcaaa
     3661 acctaaagcg aaggccaaac cgaaaacagc gggcatcaaa cgtccagtcg ttaagatgga
     3721 aaaaacggcg gaaaaaggcg gtcgcccggc gtccaacggt aagcgtttta cctcgccggg
     3781 gcgtaaaaag aagggacgct gattaacgcc tcagactgat gaaaacgtcc aaaaagagct
     3841 cggacagtcc cctcgcccct tcggggagag ggttagggtg aggggaagat tgtgtccaca
     3901 cagacgagtg aaaatctcag gcgttgattg ttcattagcg cctgccgcgc gtcgacgtat
     3961 ttgctgacca gctaaatgac gcttcaggat ccggtttata agcctgtttt ttcttcaatt
     4021 ggcgggcttt tttcgcttca gcctcacgct cgaccattaa tttatcgatg tactctttct
     4081 taatgctgtt ggtttcggag ttggtcagta cgcgaccatg cgcaatccgc gcccgatcca
     4141 gcagtgtttt aagttcacgc tgctcgcgtt cagtcatctc tttttgggta atacggggga
     4201 gtgccatgat ggtgccctca gtgagccaga gagttcagtg tacgggaatt cgtttgcgag
     4261 cagaactgat aatattcatt ttgccttctc ttaactattt atctctttcg ataattaatt
     4321 agagatgcag ataaaaaaat taaaggcaat tattctcgat aaagacgttg gttaacagag
     4381 tacaggctcg tttattgata agcatagtga caagaaaatc aatacggccc gaaatatagc
     4441 ttccaggcca tacagtattt actcaaacaa attactatgc agtttttgca ccacctgctc
     4501 ggcatcttcg ccgggcacca ggaagcacag gttatggctg gatgcgccgt aacaaatcat
     4561 gcgaatgttg aacggttcca gtacgccgaa tacctctttg ccaacgccgc aggcttttga
     4621 caggtcattg ccaatcaacg cgaccagcgc cagaccttct tctacttcca cccggcacag
     4681 tgcggaaagc tccatcagca gagattgcgt cagcaacgta tcgccagtgg aggttgaacc
     4741 ggtggtatca agggttaatg ccacgctcac ttctgacgtg gtgattaagt ctaccgaaat
     4801 attatgccgc gcgaggatgc cgaaaacttc cgcgaggaag ccgcgagaat gcagcatatt
     4861 caggctgtgc aaagtgagca gagtctgatt gcgacgaagc gccagcgcgc ggaacagcgg
     4921 aggattttca gttttattgc acaccagcgt accacctgcg cgtgggtctt tgctggagcc
     4981 gacaaagacc gggatatcgc tgcgtactgc gggtagcaac gttgccggat gcagtacttt
     5041 tgcaccaaaa gttgccatct ctgccgcttc ggcaaacgcg atttcatcaa tgcgttttgc
     5101 tgcggaaact acgcgtggat cggtggtgta gatgcccggg acgtcggtcc agatatcaac
     5161 acgagatgcg tgtaaagcct ccgccagcaa ggctgccgta taatcgctgc ctccacggcc
     5221 aagcgtcgtt gtacgacctt tattttcgct accgataaat ccctgggtga tcactaagcc
     5281 gtcattgagg cgtgggagca gctgcagcgc ggccagttcc gccagcgcgg ctacatctgg
     5341 ctctgcacga ccaaatcggt cgttggtacg catcacttta cgtacatcaa accactgtgc
     5401 ctgaacatcg cgttcgcgca ggatttcgac aaacagcagg gtcgacatca gctcgccgtg
     5461 gctgaccagc tcatctgtca gcgccggaga cgttgccagc gccgccgctt ctgccagaac
     5521 agtaatgttc tccagcagac gttcaatctc ttcacggata acgttcgggt aacgcagacg
     5581 ttccagaatg gcaaactgga tgttgcgaat agcgtcgagt ttttcgaatc gctcgccagg
     5641 ttccagccct tccgctaaag cgaccagcag attagtgata ccagcagaag ccgagaggac
     5701 tactaaacgc acgttggcat cagaaagcac aatatcagcg ctgcggttca tggcgtcaaa
     5761 atcagctacg ctggtaccgc caaatttgga gacaacaatt tcagacataa ctacctcgtg
     5821 tcaggggatc cattttcagc cttggcacaa gggaagagcg gaagacgggt gggcgcagag
     5881 cgatacttcg ctactatttt cacccagaag tgctccacca cttgcgaaac gcccgactgc
     5941 gaacgcttct ggtgacaacc caggggattc agcccctgta gccgatgatg aacgtggcca
     6001 gccgttcaat cacctcggcg atgcaccccc tcaggtgtta tcacaggact ggctcctcca
     6061 acaccgttac ttgggcaacg cgcctcttct ggcctgcgct agcgcaggta gtacatttat
     6121 aaataaaggg tgagcggggc ggttgtcaac gacggggtca tgcggatttt tcatccactc
     6181 ctggcggtca gtagttcagc taataaatgc ttcactgcgc taagggttta cactcaacat
     6241 tacgctaacg gcactaaaac catcacattt ttctgtgact ggcgctacaa tcttccaaag
     6301 tcacaattct caaaatcaga agagtattgc taatgaaaaa catcaatcca acgcagaccg
     6361 ctgcctggca ggcactacag aaacacttcg atgaaatgaa agacgttacg atcgccgatc
     6421 tttttgctaa agacggcgat cgtttttcta agttctccgc aacattcgac gatcagatgc
     6481 tggtggatta ctccaaaaac cgcatcactg aagagacgct ggcgaaatta caggatctgg
     6541 cgaaagagtg cgatctggcg ggcgcgatta agtcgatgtt ctctggcgag aagatcaacc
     6601 gcactgaaaa ccgcgccgtg ctgcacgtag cgctgcgtaa ccgtagcaat accccgattc
     6661 tggttgatgg caaagacgta atgccggaag tcaacgcggt gctggagaag atgaaaacct
     6721 tctcggaagc gattatctcc ggtgagtgga agggttatac cggcaaagca atcactgacg
     6781 tagtgaacat cgggatcggt ggttctgacc tcggcccgta catggtgacc gaagcactgc
     6841 gtccgtacaa aaatcacctg aacatgcact ttgtttctaa cgtcgatggg actcacatcg
     6901 ctgaagtgct gaaaaaagta aacccggaaa ccacgctgtt cttggtagca tctaaaacct
     6961 tcaccactca ggaaactatg accaacgccc atagcgcgcg tgactggttc ctgaaagcgg
     7021 caggtgatga aaaacacgtt gcaaaacact ttgcggcgct ttccaccaat gccaaagccg
     7081 ttggcgagtt tggtattgat actgccaaca tgttcgagtt ctgggactgg gtcggcggcc
     7141 gttactcttt gtggtcagcg attggcctgt cgattgttct ctccatcggc tttgataact
     7201 tcgttgaact gctttctggc gcacacgcga tggacaagca tttctccacc acgcctgccg
     7261 agaaaaacct gcctgtcctg ctggcgctga ttggcatctg gtacaacaat ttctttggtg
     7321 cggaaactga agcgattctg ccgtatgacc agtatatgca ccgtttcgcg gcgtacttcc
     7381 agcagggcaa tatggagtcc aacggtaagt atgttgaccg taacggtaac gttgtggatt
     7441 accagactgg cccgattatc tggggtgaac caggcactaa cggtcagcac gcgttctacc
     7501 agctgatcca ccagggaacc aaaatggtac cgtgcgattt catcgccccg gctatcaccc
     7561 ataacccgct ctctgatcac caccagaaac tgctgtctaa cttcttcgcc cagaccgaag
     7621 cgctggcgtt tggtaaatcc cgcgaagtgg ttgagcagga atatcgcgat cagggtaaag
     7681 atccggcaac gcttgactac gtggtgccgt tcaaagtgtt cgaaggtaac cgcccgacca
     7741 actccatcct gctgcgcgaa atcactccgt tcagcctggg ggcgttgatt gcgctgtatg
     7801 agcacaaaat ctttactcag ggcgtgatcc tgaacatctt taccttcgac cagtggggcg
     7861 tggagttggg taaacaactg gcgaaccgta ttctgccaga gctgaaagat gacaaagaaa
     7921 tcagcagcca cgatagctcg accaatggtc tgattaaccg ctataaagcg tggcgcggtt
     7981 aatcatcatg cgtgcctgat gccgatatgt aggccggata aggcgtttac gccgcatccg
     8041 gcaaccggag cctgatgcca atatcgacat taatgcatag tatgaggagt taaataacct
     8101 taaaaacaat gccgacaata agtcggcatt gttttatcag ataaatcccc ttgtctgtga
     8161 tttaacggaa atcataccgt gaggttaatc ctaaaataga tttttaatcg ttgtttattt
     8221 cggagaatac gcagattaat tacttttgtt tttattttaa gtttatgatt tttattgtta
     8281 tttaaatata agttgaagct tatatttgat attcattcca attatcctaa aacgccatcg
     8341 ctaattcccc gcgccgtaat tcgcatgctt tagttgtgta tactcgatcc cgcccgaaat
     8401 gtttttgggt aaatctccat tcattcaatg aagggaaatt gttatgaaaa aagttctgta
     8461 tggcattttt gccatatctg cgcttgcggc gacttctgcg tgggctgcac ctgtacaggt
     8521 gggcgaagcg gcagggtcgg cagcaacgtc ggtttcggcg ggtagttcct ccgcgaccag
     8581 cgtcagcacc gtaagctcgg cggtgggtgt cgcgctcgcg gcaaccggtg gcggtgatgg
     8641 ttctaatacc gggaccacca caaccacgac caccagtacc cagtaataaa gtatgtatcc
     8701 ccaaaataat ttgagtcatt gcatctgtgg cttgaagtat gaagggattt accataacca
     8761 cactccggtg tggttattct gcccctctgg agaagagtcg tgaagcgacc tgcactcatt
     8821 cttatctgcc tgctattaca ggcctgttca gccacgacta aagagctggg caattcactg
     8881 tgggacagtc tgttcggcac gccaggcgta cagctgacgg acgatgatat tcaaaatatg
     8941 ccctacgcca gccagtacat gcagcttaat ggcgggccgc aattgtttgt ggtgctggcc
     9001 ttcgctgaag acggacaaca aaaatgggtc actcaggatc aagccactct tgtcacacaa
     9061 catggtcgtc tggtgaagat tttgcttggc ggcgacaacc tgattgaagt gaataacctt
     9121 gccgccgacc cgctgattaa acccgcacaa attgttgatg gtgcaacatg gacgcgcacg
     9181 atgggctgga ccgagtacca gcaggtacgc tacgccaccg cacgctcagt cttcaaatgg
     9241 gatggcaccg ataccgtcaa agtcggcagc gatgaaaccc tggttcgcgt gctggacgaa
     9301 gaagtctcca ccgaccaggc gcgctggcat aaccgctact ggatcgacag cgaagggcaa
     9361 attcgccagt cggaacagta tctcggcgcg gattatttcc cggtgaaaac cactctcatc
     9421 aaggcggcaa aacaatgatt aaacaaactt ttgtcgcgtt gcttttgagt gtgggagcgt
     9481 catcggtctt cgcggcagga accgtcaagg tgttcagcaa tggcagcagt gaggccaaaa
     9541 cactaacagg cgcagagcat ttaatcgatc tggtaggcta accgcggctg gcaaacaact
     9601 ggtggcccgg tgcggtgatt agcgaagagc tggcaacggc ggcagcattg cgtcagcagc
     9661 aggcgttgct gacacggctg gctgaacagg ccgcagactc cagcgccgac gatgccgccg
     9721 ccattaacgc cttacgccag caaattcagg cgttgaaagt gacgggcagg caaaaaatca
     9781 atcttgatcc cgatatcgtg cgcgttgccg aacgcggtaa cccaccgttg cagggcaact
     9841 acacgctgtg ggtcggacca ccgccgtcca cggtcacgtt gttcgggctt atcagccgtc
     9901 ctggcaagca gccattcact ccaggtcgcg acgtggcgag ctatctctcc gggcagaacc
     9961 tgcttagcgg tgcggatcgc agctacgcgt gggtggttta cccggacgga cgcacgcaaa
    10021 aagcgccggt ggcttactgg aacaagcgtc acgtagagcc gatgcccggc agcattattt
    10081 atgttggcct cgcggactcc gtctggagtg agacgcctga tgcccttaac gccgacattc
    10141 ttcagactct gacgcagcgg ataccccaat aatgaaaaaa agacatctgc ttagcttact
    10201 ggcgctgggc attagcatgg cttgctacgg cgaaacatat cctgcgccca ttggcccgtc
    10261 gcagtcggat ttcggtggcg taggattatt acaaacgccc accgcacgca tggcgcggga
    10321 aggggagttg agcctgaact atcgcgataa cgatcagtac cgttattact cagcttcagt
    10381 gcaactcttc ccgtggctgg aaacaacgct gcgctacacc gacgtgcgca cccggcagta
    10441 cagcagcgtc gaagcgttct ctggcgatca aacgtataaa gataaagcct tcgatctcaa
    10501 actgcgtttg tgggaagaga gttactggct gccgcaagtg gcggttggtg cgagggatat
    10561 cggcggtacg gggctgtttg atgcggaata tcttgttgcc agcaaagcct gggggccgtt
    10621 cgattttacg ctcggcctgg gctggggtta tctgggcacc agcggtaatg tgaaaaatcc
    10681 gctctgttca gccagtgata aatattgcta tcgcgataac agctacaaac aggcgggatc
    10741 tatcgacggt agccagatgt tccacggtcc tgcctcactg tttggcggcg tggaatacca
    10801 gacgccctgg caaccgctgc gcctgaaact ggagtatgaa ggcaataatt atcagcagga
    10861 ttttgccggg aagctggagc aaaaaagtaa gtttaacgtc ggtgcgattt atcgcgttac
    10921 cgattgggcc gacgttaacc ttagctatga acgtggcaac acctttatgt ttggcgtcac
    10981 gctgcgcacc aactttaacg atctgcgccc gtcttacaac gataacgccc gcccgcaata
    11041 tcaaccgcag ccgcaggatg ccattttgca gcattcggtg gtggcgaatc agttaacgct
    11101 gttgaaatac aatgtcggac ttgccgatcc gcagatccag gcgaaaggcg atacgctgta
    11161 tgtcaccggc gagcaggtga aatatcgtga ttcgcgcgaa gggatcatcc gtgctaatcg
    11221 gatcgtgatg aacgatctgc cggatgggat caaaacgatc cgcattacgg aaaatcgtct
    11281 taacatgccg caggtgacga cggaaaccga tgtcgccagc ctgaaaaatc atctcgccgg
    11341 agagccgttg ggccacgaaa cgaagctggc gcaaaaacgc gtcgagccag tggttccgca
    11401 gtccaccgag cagggctggt atatcgacaa atcacgcttt gatttccata tcgatccggt
    11461 gctgaaccag tcggtcggtg gcccggaaaa cttttacatg tatcagctgg gcgtgatggg
    11521 aatggcagat ttgtggctga cggaccatct gctgaccacc ggcagcctgt ttgcaaatct
    11581 tgccaacaac tacgacaagt ttaactacac caatccgccg caggactcgc acttaccgcg
    11641 cgttcgtacc catgtgcgcg agtatgtgca gaacgatgtc tatgtgaata acctgcaagc
    11701 caactacttc cagcatctgg gcaacggctt ctacggtcag gtctatggag gttatctcga
    11761 aaccatgttt ggcggtgcgg gggccgaagt gttgtatcgt ccgctggaca gtaactgggc
    11821 gtttggtctg gatgccaact acgttaaaca gcgcgactgg cgtagtgcaa aagatatgat
    11881 gaaattcacc gactacagcg tgaaaaccgg acatctgacc gcctactgga cgccatcttt
    11941 cgcccaggac gtgttggtga aagccagcgt cgggcagtat ctggcagggg ataaaggcgg
    12001 cacgctggag atcgccaaac gctttgacag cggcgtggtg gtgggtggct atgccacgat
    12061 caccaacgtt ttgaaagagg agtacggcga aggggacttc accaaaggcg tgtatgtctc
    12121 ggtaccgttg gatctcttct cgtctggccc gacacgcagc cgtgcggcga ttggctggac
    12181 gccgctgacg cgtgacggtg gtcagcaact tgggcgtaag ttccagttgt atgacatgac
    12241 cagcgaccgt agcgtcaatt tccgctaagt catgggaaag gtgccagttt tcgcactcac
    12301 tggcaccttc attcttaatg gcctgtcgag ccatcaggaa cgcagttcac ccccggtttg
    12361 cgatctggtg tgtaaaggcg aaaacattct gtcttcctgt ccgtcgatat cggttgcagg
    12421 tctggttgcc tgagcgactg ggccatcatt gggctggaga cattgctttg cggtaggtcg
    12481 gctttatcag cagtaccgag cggaccagca taagcaggaa gaacagagac tgataacatc
    12541 aaagcagcaa aataaggctt catttttacc acctttatca ggttacgttt catttgttcc
    12601 agaggaacat tgtcgatttt tcgcgcattg ctggtggctg ggaatcacct gaatgggtga
    12661 tttttgaatt accggcttgg gtgcggtttg tcttgccgga tgcgccgcca ggcgcggctt
    12721 atccggccta cgggtaggta tatccggctt tggtggaggc gcgctccaaa tccaggttga
    12781 acaaaacata cacaaaaaat atagatctcc gtcacatttt tgcgttatac aggaagctcg
    12841 ccactgtgaa ggaggtactg ctatgacgtc actctctcgt ccgcgcgtgg agtttatctc
    12901 caccattttg cagaccgtac tcaatcttgg cctgctgtgc ctcggcctga ttttggttgt
    12961 cttcctcggc aaagaaacgg tgcatctggc agatgtgctg ttcgcgccag aacaaaccag
    13021 caaatatgag ctggtggttt actttctcta tttcgaattt atcgcgctga ttgtgaagta
    13081 ctttcagtcc ggttttcact tcccgctacg ttactttgtc tatattggga tcaccgccat
    13141 tgtgcgcttg atcatcgtcg atcataaatc gccactggat gtgttgatct actcggctgc
    13201 gatcctgtta ctggtgatca ctctgtggct gtgtaattcg aaacggctga agcgggagta
    13261 aaaagacagc acgccgaact ggcgcggcgt gctggacagg aagattacag cgtagcagtt
    13321 tgttgtgttt tcttcgtttc cggttcccag agggcttcca gctcctcaag ggttttacct
    13381 ttggtttccg gggcaaattt ccacataaat agtgctgcca gaacgcccat acacccgtaa
    13441 atccagtagg agaaaccgtt gtggaaatgg gccaccagcc aggagttttt gtccatcatc
    13501 gggaaggtcc aggagacgaa gtagttcgcc agccactggg ccgccaccgc gattgccagc
    13561 gccttaccac gaatagcatt cgggaagatt tccgacagca gtacccagca taccggaccc
    13621 caggacatgg caaaggcagc aacatagaac agcatcgaca gtagcgccac aatacccggt
    13681 gcctgagtgt aaaacgcggt accgaggcta aacataccga ttgccattcc gagtgcgccg
    13741 ataatttgca gtggcttacg accaaattta tccaccgtca taattgccag aacggtgaag
    13801 gtgaggttga taactccgac aataatggtc tgcaacagcg cgatatccgt gctggccccc
    13861 agcgttttga acacttccgg cgcgtagtac agcaccacat tgatgccgac aaattgctgg
    13921 aagatggaga gcataacgcc gatgacaatc acgcccacgc caaacatcag cagacgacca
    13981 ccggttttgc ggccatgatc cagggagtgt ttaatttcct gtactgcctg agttgcaagc
    14041 gtgttgccca taattttgcg caggatactt tccgcctgtt cttgcttgcc gcgtgacatc
    14101 agccagcgag ga
//
LOCUS       DAJVUK010000110        13850 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.110, whole genome shotgun sequence.
ACCESSION   DAJVUK010000110 DAJVUK010000000
VERSION     DAJVUK010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13850)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13850)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13850
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.110"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..565)
                     /locus_tag="OQQ57_002960"
     CDS             complement(<1..565)
                     /locus_tag="OQQ57_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957645.1"
                     /translation="MSTTTRKFKTIITDTGAKKLAQVAAPDGKPVRLTHMAVGDGGGT
                     LPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHG
                     DLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKL
                     KEHEQSRRHPDASLTAKGFVQLSSATNS"
     gene            complement(568..1098)
                     /locus_tag="OQQ57_002961"
     CDS             complement(568..1098)
                     /locus_tag="OQQ57_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HCS1957646.1"
                     /translation="MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPGD"
     gene            complement(1091..1987)
                     /locus_tag="OQQ57_002962"
     CDS             complement(1091..1987)
                     /locus_tag="OQQ57_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCS1957647.1"
                     /translation="MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVS
                     AALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLV
                     ITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
                     PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLY
                     FYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNM
                     AISDIQAARCESFTISEGGRNE"
     gene            complement(1991..2320)
                     /locus_tag="OQQ57_002963"
     CDS             complement(1991..2320)
                     /locus_tag="OQQ57_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001705832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCS1957648.1"
                     /translation="MNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLI
                     DEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVE
                     LTITLRE"
     gene            complement(2338..2904)
                     /locus_tag="OQQ57_002964"
     CDS             complement(2338..2904)
                     /locus_tag="OQQ57_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HCS1957649.1"
                     /translation="MRLLSNIIRTGIISEVDEKSWRVRVRSGELETGWLRWNTSRAGA
                     FNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDAIPAPGKSLKEIVVSAPDGAVFRY
                     DADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNITHSGG
                     NFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            complement(2916..3551)
                     /locus_tag="OQQ57_002965"
     CDS             complement(2916..3551)
                     /locus_tag="OQQ57_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCS1957650.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     PQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNS
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA
                     RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR"
     gene            complement(3544..4011)
                     /locus_tag="OQQ57_002966"
     CDS             complement(3544..4011)
                     /locus_tag="OQQ57_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957651.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            complement(4149..4556)
                     /locus_tag="OQQ57_002967"
     CDS             complement(4149..4556)
                     /locus_tag="OQQ57_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HCS1957652.1"
                     /translation="MKLWPTLGVAFLLTAGWGTSMRLSWSLGRENARNEAQASTLKST
                     ADTLNIISAGVQDMQQVLAQLRVENQQRNQDGEVRREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            complement(4553..4945)
                     /locus_tag="OQQ57_002968"
     CDS             complement(4553..4945)
                     /locus_tag="OQQ57_002968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HCS1957653.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQMSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGAYPA"
     gene            complement(4942..5265)
                     /locus_tag="OQQ57_002969"
     CDS             complement(4942..5265)
                     /locus_tag="OQQ57_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCS1957654.1"
                     /translation="MSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTL
                     VQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKARDKVIAAFNRRV
                     KEKDE"
     gene            complement(5268..5468)
                     /locus_tag="OQQ57_002970"
     CDS             complement(5268..5468)
                     /locus_tag="OQQ57_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HCS1957655.1"
                     /translation="MKVKALEGDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDA
                     GQEVEMPEPEKKKREMIQLWGE"
     gene            complement(5468..5962)
                     /locus_tag="OQQ57_002971"
     CDS             complement(5468..5962)
                     /locus_tag="OQQ57_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HCS1957656.1"
                     /translation="MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAV
                     RLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWH
                     WRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIF
                     AELC"
     gene            complement(6130..6876)
                     /locus_tag="OQQ57_002972"
     CDS             complement(6130..6876)
                     /locus_tag="OQQ57_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004983471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HCS1957657.1"
                     /translation="MITPAQQHWQNVMAQRAGRANEGVDHAARTAHEEVLYRLRLAQA
                     RLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIATLMVWAIDCGDLPLAL
                     RIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLDTLREI
                     VTDQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLS
                     RALKKADSAAEPEDASAQQAQDESSKKQQK"
     gene            complement(6922..7794)
                     /locus_tag="OQQ57_002973"
     CDS             complement(6922..7794)
                     /locus_tag="OQQ57_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005136493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HCS1957658.1"
                     /translation="MIGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLKNR
                     KYQCEQVNYDTFISYPQLDAWSAHPDFQSRISAQIARQVALDRIMIGFNGTSHADESN
                     FSTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHAGKYANADALVQDAR
                     SSLLDEWHKEADDLVVIMGRNLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGL
                     GVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDY
                     GKCAMVTGLKFADS"
     gene            complement(7791..7973)
                     /locus_tag="OQQ57_002974"
     CDS             complement(7791..7973)
                     /locus_tag="OQQ57_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HCS1957659.1"
                     /translation="MNLVMSDITRNKLGCYMAQQVSLNNIPVSALVSRFTVEPAVQQR
                     FENASKESTEFTKKIT"
     gene            complement(7997..8833)
                     /locus_tag="OQQ57_002975"
     CDS             complement(7997..8833)
                     /locus_tag="OQQ57_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HCS1957660.1"
                     /translation="MANEKKTSRKKFRVAVSGSTVDGREISPVHLREAAENFNPDVYA
                     ARVNVEHYLSPCPSSEFSAMGDVTALSTEEITEGPLAGRTALYAEIEPTERMKQLVAD
                     GKKIYSSIELHPQFSVNGRAYLVGLAMTDTPASLGTERLKFTAQQRQAVMTFNSIQGE
                     APLISEAIESEIIEMAEQRQEEGTQWFNRVMGIIGRGRKADDASFSRIQEAVEGVATS
                     QADIIDRFNVLETRHQQDRQKITSLTTELAALKEKLRTQDGDPQNRFTATGAASDQLA
                     DF"
     gene            8988..10739
                     /locus_tag="OQQ57_002976"
     CDS             8988..10739
                     /locus_tag="OQQ57_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HCS1957661.1"
                     /translation="MIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQW
                     DETPPGQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKG
                     RAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGAT
                     WYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKI
                     ILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFS
                     TPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVV
                     NHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDWKDWKP
                     FAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPSVPGGRFRTVETRRVQGLEFEEQ
                     ARVIEEFTCRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQ
                     IMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVIN
                     EPIGGEGENERFTVMEF"
     gene            10739..11785
                     /locus_tag="OQQ57_002977"
     CDS             10739..11785
                     /locus_tag="OQQ57_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1957662.1"
                     /translation="MSRKNKKVRMSSRIDLADALRKESSLSAFTFDGPYRLTGHDLLD
                     NMYCADNGRWYETPVDWYGLARAARQTSWHQSALYFKRNVLLGCYIPHPLLSRQDFSA
                     LALDWFVFGNAFLELRSNMLGEPLKLRHALAKYMRRGSDLESWRYVQDGKDAFQFRPG
                     KVCHLMNPDINQEIYGMPEYLGALLSASLSHSADMFRKLYYDNGSHAGCIIYIGAAQV
                     NRESMDSLKETLQGARGGGAFKNVLIHAPNGGKEGVQILPFQQITAKDEFMNVKAASR
                     DDVLAAHRVPPQLMGAMPGEKSAFGDVEKAARVYAINELMPVMEAMKHINDWLGEEVI
                     RFNPYALLDIQPTS"
     gene            complement(12276..12866)
                     /locus_tag="OQQ57_002978"
     CDS             complement(12276..12866)
                     /locus_tag="OQQ57_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HCS1957663.1"
                     /translation="MSEINYQALRERYSPVPVPKCPICGEEMSIQRISGAQVVYACSG
                     YGDDGDFKIGRTLADEHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYA
                     LKFQKAQDALKHAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIK
                     AGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT"
     gene            complement(12930..13241)
                     /locus_tag="OQQ57_002979"
     CDS             complement(12930..13241)
                     /locus_tag="OQQ57_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
                     /protein_id="HCS1957664.1"
                     /translation="MTTPTRRISFYLKPTAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKMNPAEAYRLAAWAGDEALSVTQTRTERPASQPVSTAQITSQMAGNIRALFP
                     E"
     gene            complement(13246..>13850)
                     /locus_tag="OQQ57_002980"
     CDS             complement(13246..>13850)
                     /locus_tag="OQQ57_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HCS1957665.1"
                     /translation="RKKANVMRPVEYQNGEAFTIRNVQVMPESIPAGFKALADMSPFE
                     SLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIA
                     NTIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAVFSGYGRVMVVG
                     GGAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE"
BASE COUNT         2835 a         3863 c         3812 g         3340 t
ORIGIN      
        1 cgctgttagt ggcgctactg agttgaacaa agccttttgc ggtcagcgag gcgtccgggt
       61 gacgtcgtga ctgttcatgc tctttcagtt tgtcatccac gtaatccact gtggccatca
      121 ccatggtgtt gtccacggta agcgccacgg tggcagtgct ggatacggtc agaatggtgc
      181 gaaatgtttg tgcacgaccg gacccttcgg caacggctgg cttgtaactt tcggcagtat
      241 ttcccaccgc gattaaatcg ccgtgctcat caaatacacc aatttcccgg atccagaatc
      301 cgcccgtttc aggaggaata accagctccg caataatgcg gttctgatgt gttgcgtcca
      361 ggatgacgcg attaacagta tgtcgccaca cctcatgcac cagacgggtc tgcttactgt
      421 ctggtgtggg caacgtgccg ccaccgtcgc ccacggccat atgagtcagg cggacaggct
      481 taccatctgg cgcggctacc tgagctaatt tttttgcacc cgtatcggtg ataatggttt
      541 taaattttcg tgttgtggta ctcatgctta atcgcctgga taaatggtaa taacttcacc
      601 gtcataagtt gccgccgctg cgaaaatatc ccccggaatt tcctgaatga tattcagccc
      661 tgtcatgtgg cggctgaccg ggcgggcatc agcaatcaac cgctccattt ccagatacat
      721 ttcctccgtc acgccactgt ccagcgtgcc gacttcaacg gtaaatgttc ccggttctcc
      781 gccgaactcc caccactcag acacgcgaat gaggtatccc agcggctcaa tggcccggcg
      841 cagtgcgctg atggtccctt tgtgtcggtg tatcagccat gcatcacgaa taacctgtcg
      901 ctttgtctct tccggccagt tgcgatccca gcggtcaacg gaaaacgccc aggcgagata
      961 aggcagcaga tgcaccgggc aggtgtccgg cgaccacagc gtgttgaggt ctaccggaat
     1021 gtctgtaatg cgtgttccga cggcttcggc acaacgcatg aaattgctgg ctgatggtgg
     1081 taacaacgaa ttactcattg cgtccacctt cgctgatggt gaatgactca cagcgcgccg
     1141 cctgtatgtc gctgatggcc atattctgtg tgggttcgat tatctccacg cgttgcacac
     1201 cgtgcacatg cagtgcggca gcaatggcgg acaacgccac gtcctgaccg ataagcccct
     1261 gctcagccag ccacttcctg aacgacgatt cagccgcggc cagaataggt tcggattccg
     1321 ggccggggta aaagtacagt tttgcattca gccgccatgt cacgattctg gcactctgta
     1381 cggtcaggcg gtcggccacc gggcgggtat cctctgcatt cagaacggcg cgaacggtat
     1441 taagcaacgc ctccgttgct gtgccgtcgc cctcagtgga caggatggaa accgtcacgt
     1501 tggccggaga cgggctgatg gcccgcgcat cgcgtaccag accgctggcg ctgcgtgcaa
     1561 aatactcgta tgcacctgac gggccagcaa cactcagacc gtcatatgcc cgttgcgccc
     1621 gtagtctcag cgaggtgtca ctttccatca ctgcatcggt ggtatccgtt gccggagtga
     1681 taaccaggcg ctttgtgttc atattgcccg cgaggttgtc caggtctgtc ccggcgctgt
     1741 ggcttagcat gcaggcgcgt gcaccctcat tgacccgctg gcgtaacagc atttcacgaa
     1801 acgacatggt ttgagcgata acgttaaggg gttccgattc cagctccagc gcggcggaaa
     1861 cggcttcacg ctgttcggcg ggataggacg caatcatcat ggcctttgtg tcagccagaa
     1921 ttgcctcaaa gtcaggctcc gcgatgatgg cgggttccgg taactgtgaa aggtcaacgg
     1981 caggcatgat ttactccctc agcgtgatgg ttaattcaac attctgcatg gtctgcatga
     2041 cagtgcccga cagcgtcacc ccggcgcggc ctcctgcctt ccagacaacg tcgatagcgt
     2101 ccagggcaat gcggggttcc catcgtgtca gcgcaatcac ggcagcactc atgcattgca
     2161 gacgcgtggt gttattcatg ggttcgtcaa tcaaatcagg cacaaggctg ccatattccc
     2221 gtcgcataac ccggcttgcc agcggggtgg tcaggatgtc cctgactgac tgtttcaggt
     2281 gctccatatc gttcaggttt cccgttccgt ccgggttcat tcctgtgtag cgggttgtca
     2341 ctgcgggcct cctgtcgaat cgctgccacc tttaacgcca ccgtgtttat gcgtatgcac
     2401 tgtgatgccg tttgaggtga aattgccgcc gctgtgcgtg atattgccgc tcatctttcc
     2461 cccttttgtg acgtcaagcg tcgccgttct cagaaggtct gtgcattcca cgacgggcgt
     2521 atccagtgtc acgctgacgg atgcctgcag ggtggctgtt ttcatgccgc tggcgctcag
     2581 tgcgcctgcg tccgcgtcgt agcggaacac cgcgccatcc ggcgcgctga ccacgatttc
     2641 tttcaggctt ttgccggggg ccggaatggc atcactccac aggctgccaa ttatcatggc
     2701 ggtttccggg ttgccgccaa tgcaggcaat taccacctgt tcgcctggtg atggcggcag
     2761 ccacacattg aaggctcccg cgcgagaggt gttccagcgc agccaacctg tttccagttc
     2821 gccgctgcga acgcgcacgc gccaggactt ctcatcaact tcagagatga tcccggtgcg
     2881 gatgatattg ctcagtagcc gcatgagttc tgcgctcacc gtacagcctc cgcaatccgg
     2941 cccagcaccg tgttataaat caggcgctca tctgcctggc tgatacccag cagctcacgt
     3001 accgggtaat cggtgaaaat gcccggcgca acctgatcgc gctcaccgaa ctgatgaacg
     3061 cgtgcaatac gtgcggccac gccgctgtaa cccaccgtca caccggaagc atctgcacgg
     3121 gctttcaggt agcgggcggt gcgcagtttt acgaacatgg ggacgcgctt tgtgctgtcc
     3181 tggttgatgc gccgggtgcg tatttccaga aagcggtcga tgtcatcccg gtaaaacgtg
     3241 cggatgctgt ttttatcctc atcccacccg gtgatggttc gcccgtattt ccccgtgtcg
     3301 tgatgccagt ttttcagcgt gcgtgcttcg ttattccaga taaagcgaat gcgctcctgt
     3361 atccgggtta cgtggcgtct gcgtggtgtc catgcggtcc cgtccggcgc tttctgtggc
     3421 cggatacgtg cctgctgggc gcggcgtaaa tcctgtgcca gctttctggc gatgttattg
     3481 atggcctgct gattcaggct gtcgcggatg gcctcaaagg tttcatccac gcgagtgaat
     3541 gccttatcca tcgctttcac cccacgtcac atcctggaat acatgcgacc agtcgccttc
     3601 ggaagatggc aggcggggtt ttggctccag caggtgttct gcctgcggtg tgccctgact
     3661 gctgcgcgtg atgcgaacgc gttcccgcag ggggagcgta aacaggagat cggcgctgtc
     3721 atcgtcattg ataacggcgg aaaatttgat gtcctgatta cgctcagggt tgagcaacaa
     3781 ctgtggctga ttttcggata accacgccag cagcggcagc gtgaggtcgt ccagctcccc
     3841 ggcgtaatcc atgacaaaca tcaccatctg atagcggtaa acaaacgatg gggtttctcc
     3901 ggtcgtttca atgttgccgc tctccacgaa aatggtgaat ttttccgggt tagcctgaca
     3961 ccatcggcat gaacgggtca tggcttcacg cagggaatca gttttcagca tggttgttat
     4021 cctcgttgtt cagtcgttgc agcctgcgct gttccagtaa ttcaatggcc cgtttatccg
     4081 cgttacaggt ttccagtgca tccagaaggc ggtcgcccca tataccgaga tttccccatg
     4141 tgggagtgtc agggaagggg ggaggcgtta ccggtatggt cagcgtctgc ggtataagcc
     4201 ggactgacgg cgctggcagt ggcgcgttct gcgtgcctgc gcagcctgtc agtaaaacga
     4261 gcgtcaggca aagcgtgggc gcattcatct tttgcaatat cgttgcgtag ctgttcacgt
     4321 cttacctctc cgtcctgatt gcgttgctga ttttccacgc ggagttgcgc cagcacctgc
     4381 tgcatatcct gtaccccggc gctgatgata ttcagggtgt cggcggtact tttcagggtg
     4441 ctggcctgcg cttcgtttct ggcgttctcc cggcccagcg accacgacag acgcatggat
     4501 gttccccatc cggcagtcag aaggaaagcg acgccaagcg tgggccagag cttcatgccg
     4561 gataggctcc gtgtggtaac tgaaaatgcg gtccgtcttt cagggtcttc cagtcgccgc
     4621 cccattccac cggaatattc agttcccggc tggcctgtct gaatgctgct gcgatttttt
     4681 cgtacagcgg ccattcccat gacatctggc tgccgatata agccacaaca tccacggcat
     4741 gccccgtaag gtggcggctg ttcatggtct ggctcttacc cgtggccacc agttgcttct
     4801 ggcggtaacg gctgcgcaac ccttcggtga taccaaaatc cacttccgag atttccagtg
     4861 cccgtcgggt cactttcacc agatcaggat ttacaccctg caaattcttt tcgctccggc
     4921 tgctgaattt aaatgtgttg ctcattcgtc cttctccttc accctgcgat taaaggccgc
     4981 aataaccttg tcgcgtgctt tctctgcacc cataaaaccg attgatgcgc cgataaacgt
     5041 cacggcatct tcaggaaacc cgaagaagcg caacgacccg gccacggcca tggcaagaac
     5101 gccgcacgcc agcgatcccg ttacggtctg aaccagtgtt cgtccgtcat aaaggctcat
     5161 cagcgcggaa atgctgaccg ccgcgcctac tgcatacacc gttggcaggt ggtcaaagag
     5221 ccacgcaata acctgctctg tgatccctgt ttgaatggtg ctcactgcta ctccccccac
     5281 aactgaatca tttctcgttt cttcttctcc ggctccggca tctccacttc ctgcccggcg
     5341 tccagaaata cctgctgaca gagtccgggg ttggcatcca gcaccttttc ggtgacgccc
     5401 tgcgtcgtgc cgtagtaccg gaaacagagc gaatccacgg tgtcgccttc cagtgccttc
     5461 actttcatca gcacaactcc gcaaagattc gcgggcggca cagaatgtca gagatggccc
     5521 agctcacatc acgccacaaa tccgatgtct gtatatccag agcgtctgcc cggcggtcgc
     5581 ccttgtccgt agtgtctgca tcacgataac gctccagaat cagggcgcgc gtggcggtat
     5641 aaacagcatt gcgccagtgc cagagattga cgctttctcc gttaattacg ggtgccggaa
     5701 catcggccag cgtctgatgg ccagctgcct gctgttcctg ctgccatgct tccagctcgc
     5761 gggtaacgtg tgccacagcc ccggtggcag tatgcagcag gcgggaggtg gtcacgcgcc
     5821 ccggcagtcg taccgccaga cgcagctcgc gcagcacaat atccggccag aatgcacccg
     5881 ctgaaatgcg ggtatcgcca tcatcggtat cggtgatgtc gtcctctgcg ggtccgggtt
     5941 cagttctggc aactatagtc atggggttca ctcctgaaaa aaaatcgggc ggtgggtgcg
     6001 cggtgtaaac ggtcacggag tcaaactgga acaccgcgca cgccgcccgc tgacggggtc
     6061 agtcgttaac cgcgcttcgc cttctgcgtc gcggtggttt ttcgtgttgc aggcttccgc
     6121 gttgtctttt tacttttgct gctttttgct gctttcgtcc tgcgcctgct gtgcgctggc
     6181 gtcttctggt tcggctgcgg aatcggcttt tttcagggcg cgggaaaggg ttgcaatctc
     6241 gcgtttcaca cctgcgttcg ggttcaggtg cattgcttcg cgcagcagct tcagtgacag
     6301 ggccatgctg tccgcatcac tcaggccacg gcgggcaaag gcgcacgctt tgcataattt
     6361 ggcgcgcact tcgtccggca tgtcctggtc ggtgacaatc tcccggaggg tgtccagtgg
     6421 ttcgataaag gcggacaaat ccgcgtcggc atccgtcccg gcctgcgtca gtaccggatt
     6481 acagatttct tcggtcagta ccgtggcagc agtacggcca aagttatccg gcatgatgag
     6541 gttgtgacgg actacatacg cgccgatacg cagcgcaagc ggaagatcgc cacagtcaat
     6601 cgcccacacc atcagcgtgg caatcacttc atcctgctgc ccgccgtcag cctccagcgt
     6661 tccctcaatc cagccggaaa aatccggcaa caactctttt ttgatggcgg ctttcgcgct
     6721 tctggcctgt acgcccttaa gccgggcctg tgccagacgc agacgataca gcacctcttc
     6781 atgcgcggta cgcgcggcgt ggtccacgcc ttcattcgcc cggcctgcgc gctgtgccat
     6841 cacgttctgc cagtgttgtt gtgcaggagt aatcattttt gctctccgtt acaggcgggc
     6901 atgatgcccg ccgtgagttg attagctgtc ggcgaacttc aggccagtaa ccatcgcgca
     6961 cttgccatag tcttcaacga cataagcgtc attgatggac tggtaggtgg cgatgcggtt
     7021 gtattccggc tcgtctttca tcaggcgacg cattgaacct ttctgccagt aaatcgacag
     7081 gttgttgaac gaggtgatca gcatcgttgc atccgggaag aacggcgcaa ggaacacgcc
     7141 cagcccgcca atggtgcgcg atgacaggat gagctgcccg gcgagtaatt ccgcattggg
     7201 attctggccg ctgatgctgt tcagcacggg cagacgcagc gagttaaaca ggttgcgccc
     7261 cataatcacc acgaggtcgt cagcttcctt gtgccattca tccagcaggg atgaacgcgc
     7321 gtcctgtacc agtgcatcag cgttcgcata cttacccgcg tgcgccacgg tgttgtccat
     7381 gttgcgggag gtcagcgtca cgtcattcat aacgcgttcg ctggcgtcgg ttctgatgtg
     7441 ctccagccag cccacgttaa cgtcctgaag cagcttgttg gtgctgaagt tggactcatc
     7501 cgcgtgagac gtgccgttga aaccgatcat gatgcggtca agcgccacct gtcgggcaat
     7561 ctgtgcgctg atgcgggact gaaaatcagg gtgtgccgac caggcatcaa gctgcggata
     7621 cgaaataaac gtgtcgtagt tcacctgttc acactgatat ttgcggtttt tcagatcaac
     7681 cacgttattc gggttacggc gttttgtgcc gtcataactg gtattcgtgc gcgcaatcgg
     7741 tcctgtggta tccaggagga ttttttcgcc tttctggtcg gtcacgccga tcacgttatt
     7801 tttttcgtaa attcggtact ttcctttgag gcgttttcaa aacgctgctg caccgcgggt
     7861 tccacggtaa atcgcgacac cagtgcagat accgggatat tattaagcga cacctgctgc
     7921 gccatatagc aacccagctt gttgcgggta atatctgaca tcaccagatt cataaaaaat
     7981 ttgctccttt gtctaatcag aagtcggcca gctggtcgga ggctgcgccc gttgcggtga
     8041 agcggttctg cggatcgccg tcctgcgtgc gcagtttttc cttcagtgct gccagctctg
     8101 tggtcagtga cgtaattttc tggcggtcct gctgatggcg ggtttccagc acattaaaac
     8161 ggtcgataat gtcggcctgt gacgttgcga cgccttccac cgcttcctga atacgggaaa
     8221 aactggcgtc atccgctttg cggccacggc caataatccc cattacgcgg ttaaaccact
     8281 gggtgccttc ttcctggcgt tgttctgcca tttcgatgat ttcagactcg atggcttcgg
     8341 agataagcgg cgcttcaccc tggatactgt taaacgtcat caccgcctga cgttgctgtg
     8401 ccgtgaattt caggcgctca gtgcccaggc ttgccggggt gtcggtcatc gccagcccga
     8461 ccagataggc gcgcccgtta acggagaact gcgggtgcag ttcgatactg gaatagattt
     8521 tcttgccgtc cgcaacaagc tgcttcatgc gctcggtcgg ttcgatttct gcatacagcg
     8581 cagtacgtcc ggccagcgga ccttccgtaa tctcttccgt actcagtgcg gtgacatcgc
     8641 ccattgcgga aaattcgctt gacgggcatg gcgagagata gtgctcaacg ttcacgcggg
     8701 cagcgtaaac atccgggttg aagttctcgg cggcttcacg cagatgcacc ggactgattt
     8761 cacggccatc aacagttgat ccggagacag ccacgcgaaa ctttttgcgg gatgtctttt
     8821 tttcattagc catagttttt gcccctctga ctggttcttc agtcatgatg gcaaagcgta
     8881 acaggctgat acaaagggct tttgttgtaa gaaaacggcc agaacagagg gttaaggaga
     8941 acagtttcgc gcgcgggtaa tcttcctgta attactcagg gggagcaatg attcaggacg
     9001 cttttgtgcg ccagcgtgcg cggcaacttt actggcaggg ttatccgccc gcagaaatat
     9061 cacgtctgat gggaataaac ccgaacacga tttatgcgtg gaaaaaacgt gaccagtggg
     9121 atgaaacgcc acccgggcag cgtgtcacgc agtccatcga tgcgcgcctc atccagctta
     9181 ctgaaaaaca gaataaaaca ggcggtgact ttaaggaaat agacctgctg acccggcagc
     9241 ttaaaaagct gcatgatggc cagccggatg tgatggccgc aggaaagaaa ggccgggcga
     9301 aaaaactcaa aaatcatttc acgccggaac agattgccgc actgcgggaa aaaatcatca
     9361 gcaggctgga gtggcatcag cggggctggt ttgactccct gaccctttgc agggaagccg
     9421 ggatacgtaa caggatgatc ctgaaatccc gacagattgg ggcgacctgg tattttgcac
     9481 aggaagcact gctgatggcg ctgcgtgacg atgtggcgca accttaccag cgtaaccaga
     9541 tttttttgtc tgcgtcgcgt cgtcaggcgt tccagtttaa aagcattatt cagaaggccg
     9601 cggctgaagt tgatgtggag ctgaaagggg gcgataaaat catcctctcc aacggcgcag
     9661 agctgcattt tctcggcact tctgctgcgt cggcacagtc ctatacgggc aatttttatt
     9721 ttgatgaatt tttctgggtc agtcgctttg ctgaactgcg caaggtggct ggcgctatgg
     9781 caaccctcag cggactgcgg cgcacctact tctccacgcc atccaccgaa acgcacgagg
     9841 catacgccta ctggaacggc gaccgctgga acgagaaaaa ggcctcgcat aaacgccagc
     9901 gtttttctgt ggactggaaa acgctgcata acgggcttat ctgccctgac cggacgtggc
     9961 ggcaaattgt cacgctggaa gatgtggtta atcacggctg gaaacacacc gatatcgacg
    10021 aaattcgtga tgaaaacacc gaagacgagt tcctcaatct ctatatgtgt gagtttgtcc
    10081 gcgaagggga atcggcattt aacctgaata tcctgattgg ctgcggcgtt gacggatacg
    10141 acgactggaa agactggaaa ccttttgctc cccgcccgat ggggaatcgt ccggtatgga
    10201 ttgggtatga cgcaaacggc agcagtggca acggcgacag cggcgctgtg tccgtggtgg
    10261 ttcctccgtc tgttcctggt ggccgttttc gaacggtgga gacgcgacgc gttcaggggc
    10321 tggagtttga agaacaggcc agagtcattg aagagttcac gtgtcgctac aacgtggaac
    10381 acatcggcat tgatgtgacg ggcgggaacg gggaggctgt ttatcagata gtgaaacggt
    10441 ttttccctgc cgctattccg tacaccttca cgctgtcatc aaaacggtcg ctggtactga
    10501 aaatgctgca aataatgcgt gccgggcggt gggaatacga tcgcgccgaa cgcgagctgg
    10561 tcgcggcctt taacgccgtg cgtaaggtga aaacaccggg cggctttatc acttacgaaa
    10621 cggaccgagc gagggggatc agccacggcg accttgcgtg ggcaaccatg cttgctgtca
    10681 ttaacgaacc gattggcggc gaaggagaaa acgagcgttt cacggttatg gagttctgat
    10741 gagcagaaaa aataaaaaag tgcgcatgag ttcacgcatt gatctcgctg atgcgctcag
    10801 gaaagaatca tcgctcagtg cattcacatt tgatggtcct tatcgcctga ccgggcatga
    10861 cctgctggac aatatgtact gtgctgataa cgggcggtgg tatgaaaccc cggtggactg
    10921 gtacggtctg gcaagagctg cccggcaaac gtcctggcat cagtctgcgc tttattttaa
    10981 gcgcaatgta ttgctcggtt gctacatccc gcacccgctg ctttcccggc aggatttctc
    11041 ggcgctggcg ctggactggt ttgtgttcgg taacgcattc cttgagcttc gaagcaatat
    11101 gctcggcgaa ccgcttaaat tacggcacgc cctggcgaaa tacatgcgac gcggaagcga
    11161 tcttgaatca tggaggtatg tgcaggatgg caaggatgcg tttcagtttc gcccaggcaa
    11221 agtgtgtcac ctgatgaatc ctgacattaa ccaggaaatc tacggcatgc cggaatatct
    11281 cggcgcatta ctctcggcca gcctgtctca ttcggcggac atgttcagaa aactgtatta
    11341 cgacaacgga tcccacgccg ggtgcatcat ctacatcggt gccgcgcagg taaaccgcga
    11401 aagcatggac tccctgaaag aaacgctaca gggtgcgcgt ggtggtggtg cgtttaaaaa
    11461 cgtgctcatt catgcgccca acgggggcaa agagggggtg caaattttgc cgttccagca
    11521 gatcaccgca aaggatgagt tcatgaatgt taaggcggca tcccgtgatg atgtgctggc
    11581 tgcgcaccgc gttccgccgc aactgatggg ggcgatgccg ggtgaaaaaa gtgcgtttgg
    11641 tgatgtggag aaggccgcgc gggtttacgc aattaacgag ctgatgcccg tcatggaggc
    11701 catgaagcac atcaatgact ggcttggcga agaggtgatc cgctttaacc cttacgcact
    11761 gttagacatc cagcccacat cctgacgcgc ttcgcttgtc tgctgcttcg ccggggcata
    11821 aaaaatttat gccccgactc tccagctcct gtatcagtca gataatttca cgacgccttc
    11881 cagtttatcg ccaccatcga cggtcagact cttacgcaat cccaccgcgt tgactgcatg
    11941 ttctcgccgc ctcagtgcga ttttgacggc cttacctttc accccatcaa atcagaatcc
    12001 ctcacgtatt tttcacgctc agcgtgagaa atacggccat tctgtcgtgt cgctgcgaca
    12061 tcgttaaggg aacgctattt accccctgaa acgcgggctg ttcccccgtc acctgcgcgc
    12121 agaaaaagcg cgtttttttg tgcacgcacg gatccttgac ggatccagcc gccacgcggg
    12181 ctggaagggc aaaaattcgt tcaaaaaaat tgtgcaaatt tgtgcactat tgtgcagcag
    12241 ggcgatgtgc gattatcgcc ctggtttgag ggggatcagg tgttattttt atctgtcgtc
    12301 agtgggctaa accatccaca atttacatcg catgactgat gcgttctgtc ctcgtgtttc
    12361 tcctgccaca atgcttttcc gccagccttt atgatggctc tttcaacatc ccgctcgtat
    12421 cgcaagggct gaaatacgtc attaatgaaa tattcgctta tgtccggaag cgatactgca
    12481 aaattatttg tttgttgcgc cgtcctgcta tgcagcaaag cggcatgctt taatgcgtcc
    12541 tgtgctttct ggaatttaag tgcatagtca gtggcgattt tttccagttc agcgattcgg
    12601 ttgtctttgg tttccagcca atcaagtagc gccaatactt caggatcccc gacatccaac
    12661 actgttacgc gtgatttttc ataatgttcg tcagcaagag ttcggccaat tttgaaatct
    12721 ccatcatcac cataaccgga gcaggcataa acaacctgtg ctccagatat tcgctgaatt
    12781 gacatttcct cgccgcaaat agggcatttc ggtactggca caggtgaata acgttcacgt
    12841 aatgcctgat agttgatttc gctcattaag tcgttctcct tgtttatgtt ctgaggtgga
    12901 gagcagggcg aactcgccct gatgttgtgt tattcaggaa ataacgcccg gatatttccg
    12961 gccatctgac tggttatctg tgcggttgat actggctgtg atgcggggcg ttctgtcctg
    13021 gtttgtgtca ctgataacgc ttcatcacca gcccatgcag ccagtcgata agcctctgcc
    13081 ggattcattt tcagaagtgc cagcccggcc agaaaagcca cgcgttggcc gcttttgcgg
    13141 gcttctggtg taaggctgtc cagccaggcg catgcttctc cttcgttctt gacggcggtg
    13201 ggcttcagat agaaacttat ccgtctggtt ggagtcgtca ttggtttact ccttgtccat
    13261 tgcgtacagc ccattaacca gagcaaactg tggcaccccg tccgcgatga aagtcgcatt
    13321 aactccgcag gcttcgcgga tagcgggtgc cacaatctcc gcccctccac cgacaaccat
    13381 cacccgcccg taacccgaaa aaaccgccag cgcgcggatc acgcgttgtt tcagtgtttc
    13441 ttccttttca cgaattaccg ccatcaggct ggcgtaatgc gcgtcattgt ggatgtgctg
    13501 gcgcagccag gcttcatcat ggcgatgttc gataatggta ttggcgatgt ggtgactggt
    13561 gcgcataccg ttagtggcca tcaccgacag tacggcatcg gccatcagag aaacgcccac
    13621 gtgtggatcg caaaacacct ggctgatacc tgccagttgc ccctgaacct ttgccacatc
    13681 cagcgtggtt ccgcccaaat ccacaatcag cagggattca aacggactca tgtcagccag
    13741 tgccttaaag ccagccggaa tggattcagg cataacctgt acgttacgga tagtgaatgc
    13801 ttcgccgttc tggtactcca ccgggcgcat gacgttcgct tttttgcggt
//
LOCUS       DAJVUK010000111        13812 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.111, whole genome shotgun sequence.
ACCESSION   DAJVUK010000111 DAJVUK010000000
VERSION     DAJVUK010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13812
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.111"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            34..981
                     /locus_tag="OQQ57_002981"
     CDS             34..981
                     /locus_tag="OQQ57_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001361319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HCS1957666.1"
                     /translation="MKNVLVTVPSFSARCVSASKLLRENNFNLIIKNNVEHLLKSEST
                     ALRESICAVIAGKDCYQADTLSLLPGVKIISRFGTGIDNIDLRAAQQSGIVVNNAVGI
                     NSNAVAEFIIGLIFASMRNIPGSYHAMQNGYWGESHGYELQGKRIGMVGYGNIGKTLA
                     KRLSGFDVELLAYDKQPDYQVADKVGVQFVSIEDIFMQSHVIIVLLPFSPELENFISH
                     KYLSMMRNGALIINAARGKLLDEGALLQVIEERNVFAALDVFSSEPLAQFSPLLHAKN
                     IITTPHIAAATVESYQQTGTHVAQSIIDYFAGREIKNVL"
     gene            complement(1060..1136)
                     /locus_tag="OQQ57_002982"
     tRNA            complement(1060..1136)
                     /locus_tag="OQQ57_002982"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1100..1102),aa:Met,seq:cat)
     gene            complement(1169..1245)
                     /locus_tag="OQQ57_002983"
     tRNA            complement(1169..1245)
                     /locus_tag="OQQ57_002983"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1209..1211),aa:Met,seq:cat)
     gene            1454..2551
                     /gene="mltA"
                     /locus_tag="OQQ57_002984"
     CDS             1454..2551
                     /gene="mltA"
                     /locus_tag="OQQ57_002984"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HCS1957667.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKSTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LGDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            2628..3434
                     /gene="tcdA"
                     /locus_tag="OQQ57_002985"
     CDS             2628..3434
                     /gene="tcdA"
                     /locus_tag="OQQ57_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HCS1957668.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSIGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(3485..3928)
                     /gene="csdE"
                     /locus_tag="OQQ57_002986"
     CDS             complement(3485..3928)
                     /gene="csdE"
                     /locus_tag="OQQ57_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HCS1957669.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL
                     PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVLGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAAAKQV"
     gene            complement(3928..5133)
                     /gene="csdA"
                     /locus_tag="OQQ57_002987"
     CDS             complement(3928..5133)
                     /gene="csdA"
                     /locus_tag="OQQ57_002987"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HCS1957670.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALSQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAENWSHSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            5325..5552
                     /locus_tag="OQQ57_002988"
     CDS             5325..5552
                     /locus_tag="OQQ57_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCS1957671.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            5903..6820
                     /gene="gcvA"
                     /locus_tag="OQQ57_002989"
     CDS             5903..6820
                     /gene="gcvA"
                     /locus_tag="OQQ57_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     regulator GcvA"
                     /protein_id="HCS1957672.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
     gene            6839..7234
                     /locus_tag="OQQ57_002990"
     CDS             6839..7234
                     /locus_tag="OQQ57_002990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HCS1957673.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            7227..8327
                     /gene="rlmM"
                     /locus_tag="OQQ57_002991"
     CDS             7227..8327
                     /gene="rlmM"
                     /locus_tag="OQQ57_002991"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010435097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HCS1957674.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(8371..9102)
                     /gene="fucR"
                     /locus_tag="OQQ57_002992"
     CDS             complement(8371..9102)
                     /gene="fucR"
                     /locus_tag="OQQ57_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HCS1957675.1"
                     /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
                     QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
                     STCWYLARQLPDINIQVFTNSHPICYELGKRERIQLISSGGTLERKYGCYVNPSLISQ
                     LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
                     RIGHLDEVTHIISDERQVATSLVTA"
     gene            complement(9160..9582)
                     /gene="fucU"
                     /locus_tag="OQQ57_002993"
     CDS             complement(9160..9582)
                     /gene="fucU"
                     /locus_tag="OQQ57_002993"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HCS1957676.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
     gene            complement(9584..11002)
                     /gene="fucK"
                     /locus_tag="OQQ57_002994"
     CDS             complement(9584..11002)
                     /gene="fucK"
                     /locus_tag="OQQ57_002994"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HCS1957677.1"
                     /translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN
                     TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW
                     KCPRTAAVMDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERTHAWFFI
                     SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG
                     TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILMVRSAQVDT
                     SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP
                     SADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKA
                     SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR
                     AQIHYQYRYFYPQTEPEFIEEV"
     gene            complement(10999..12744)
                     /gene="fucI"
                     /locus_tag="OQQ57_002995"
     CDS             complement(10999..12744)
                     /gene="fucI"
                     /locus_tag="OQQ57_002995"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HCS1957678.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
                     LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
                     NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
                     ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
                     SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
                     TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
                     WAAHGMDIEVLQERL"
     gene            complement(12777..>13812)
                     /gene="fucP"
                     /locus_tag="OQQ57_002996"
     CDS             complement(12777..>13812)
                     /gene="fucP"
                     /locus_tag="OQQ57_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HCS1957679.1"
                     /translation="ITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAA
                     NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQ
                     LSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRL
                     ARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGR
                     FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFS
                     LGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF
                     ARFRSQTATN"
BASE COUNT         3338 a         3400 c         3639 g         3435 t
ORIGIN      
        1 ttggggtggc gttcattgaa gtgagtgtca gctatgaaaa atgttctggt caccgtcccc
       61 agcttttcag cacgctgtgt ttccgccagc aagttgctaa gagagaataa ttttaatctt
      121 attattaaga ataatgtgga gcatctgctt aaatcagaat ccactgcatt acgagaatct
      181 atttgcgcgg tcatcgccgg aaaagattgt tatcaggcgg acacgctatc attgctgcct
      241 ggtgtgaaaa taatatcgag attcgggacg gggatagata atattgatct tcgtgcagca
      301 caacaatccg gtattgtagt caataatgcg gttgggatta attcaaatgc tgtcgcggaa
      361 tttatcattg gacttatctt cgcgagcatg agaaatattc ccggcagcta tcatgcgatg
      421 caaaatggct actggggtga gtcgcatggc tatgaattac aaggcaaacg gattggcatg
      481 gttggctacg gcaatatagg taaaaccctg gcaaaaaggt tatccggttt tgatgttgag
      541 cttttagctt atgacaaaca acccgattat caggttgctg acaaagttgg agttcagttt
      601 gtatcaattg aagatatctt tatgcagtcg catgtcatca ttgttctttt gcctttttct
      661 cctgagctgg agaacttcat tagtcataaa tatttgtcga tgatgcgcaa tggtgctcta
      721 atcatcaatg ccgcaagggg aaagttgctg gatgagggcg ctttactaca ggtgattgaa
      781 gaacgaaatg tgtttgcggc gctggatgtg tttagctctg aaccgttggc gcaatttagc
      841 ccactgctac atgccaaaaa tatcattaca acgccgcata ttgcggccgc caccgttgag
      901 tcataccagc aaaccggtac acacgttgcc cagtcgataa ttgattactt cgcaggaagg
      961 gagataaaaa acgtgttgtg agttcagcga acgaagtttt taaatacaaa aaaaccgcaa
     1021 tttgtggaac acattgcggt ttatcagcat tctaagtatt ggttgcgggg gccggatttg
     1081 aaccgacgac cttcgggtta tgagcccgac gagctaccag gctgctccac cccgcgtcac
     1141 cgtactgctt tatttcatca aatttgattg gttgcggggg ccggatttga accgacgacc
     1201 ttcgggttat gagcccgacg agctaccagg ctgctccacc ccgcgtccgt ggatgcgcac
     1261 tatactccgc tcgcgttttc atgcaacctt ttttttaccc cgatcacgga tttagcatga
     1321 ttttgaacaa aaacaaacca ctaaagccta ttttttgtgc aaaatttgcg tcagggagag
     1381 gctgctcatt tcattaaacg cggcggtttg ttatcttcgt tgcgccttat tttttaacct
     1441 gaagaagaga acaatgaaag gacgttgggt aaagtacctt cttatgggca cggttgtggc
     1501 aatgcttgcc gcctgctctt ccaaatcaac cgatcgcgga cagcaatata aagacgggaa
     1561 atttacccag cctttctctc tggtgaacca gccagatgcc gttggcgcgc cgattaacgc
     1621 cggtgatttt gccgagcaaa ttaaccatat ccgtaattcg tcaccgcgtc tgtatggcaa
     1681 ccagagtaat gtttataacg cggtgcaaga gtggctgcgc gcaggcggtg atacccgcaa
     1741 tatgcgccag ttcggcattg atgcctggca gatggaaggt gccgacaact atggtaacgt
     1801 gcagtttaca ggctattaca cgccggtaat tcaggcgcgc catacccgcc agggcgagtt
     1861 ccagtatcct atttaccgta tgccgccaaa acgtggtcgt ctgccgtctc gtgcggagat
     1921 ctacgcgggg gcattgggcg ataaatacat cctcgcttac agcaactctc tgatggataa
     1981 cttcattatg gatgtgcagg gtagtgggta tatcgacttt ggtgatggca gtccgcttaa
     2041 ctttttcagc tatgcaggga aaaacggtca tgcctatcgc agcattggta aggtgctgat
     2101 cgaccgtggc gaagtgaaaa aagaagatat gtcgatgcag gcgattcgtc attggggcga
     2161 aacacacagt gaagccgagg ttcgcgagct gctggaacag aacccgtctt tcgtcttctt
     2221 taaaccgcaa tcttttgcac cggtgaaagg ggcaagtgcg gtgccgctgg ttggccgtgc
     2281 ttctgttgcc tccgatcgtt caattattcc gccaggtact accttgctgg cagaagtgcc
     2341 gctgctggat aataacggca aatttaacgg tcagtacgaa ttgcgtctga tggtggcgct
     2401 ggatgtcggt ggcgcaatca aaggccaaca cttcgatatc tatcaaggga tcgggccgga
     2461 agccggacat cgcgcaggtt ggtacaacca ctatggacgt gtctgggtgc tgaaaaccgc
     2521 cccgggcgca ggtaacgtct ttagcggctg atgtgttatt ctgtataccg tttttacgga
     2581 tacgacaggg tgagggataa cctcaccctt tttaattctg aggtgctatg tctgtggtaa
     2641 ttagtgatgc atggcgtcag cgttttggtg gcacagcgcg tctgtatggt gaaaaagcgt
     2701 tgcaactgtt tgctgacgcg catatttgtg tggttggtat cggtggtgtc ggttcctggg
     2761 cggcggaagc gctggcgcgc acggggattg gcgcaatcac gcttatcgat atggatgatg
     2821 tgtgcgtcac caataccaat cggcaaattc acgctctgcg cgataacgtc gggctggcaa
     2881 aagcggaagt catggcggag cgcattcgcc agattaaccc ggagtgccgt gtaacggtgg
     2941 tggatgattt cgtgacgccg gataacgtag cgcaatatat gagtgccggt tattcgtacg
     3001 tgattgatgc cattgatagt gtacgaccca aagcggcgct gattgcttat tgtcggcgca
     3061 ataaaatccc gctggtcacg accggtggcg cgggtgggca gattgacccg acgcagattc
     3121 aggttaccga tctggcgaaa acgattcagg acccgctggc ggcgaagttg cgcgagcgcc
     3181 tgaaaagcga ttttggcgta gtgaaaaaca gtataggtaa gctcggcgtg gattgcgtgt
     3241 tttctactga agcgctggtg tacccgcagt cagacggtac ggtgtgtgcg atgaaagcca
     3301 cggcagaagg gccgaagcgg atggattgtg catctggatt tggcgcggca acgatggtga
     3361 ccgccacctt tgggtttgtt gcggtttctc atgcgctgaa gaagatgatg gcgaaagcag
     3421 cgcgtcaggg ttaaacaatc aggtcggatg cgacgcgaac gtcttatccg acctggttct
     3481 gtgcttaaac ctgcttcgcc gcagcgataa ttgcctcgct taacgcattc aacccctggc
     3541 tgcgtgaggc gctaagctgc ccacgcaatc ccagctcatc aaacaatgcc agcggcgact
     3601 gtgcctgtaa ttcggcggcg gttttcccct caacggcagt caacaacacc gccaacaggc
     3661 cgagcacaat gcgcccttcg ctgtcgccaa agaagtgcat tttaccgttt tcagccacgg
     3721 tatatcccag ccagacgcgg ttttcgcatc cggcaatctc tttagcctgc gcttttaact
     3781 cgtctggcaa agccggaagc tgtttcccca gcatgatcaa ctggcgatat ttatcttccc
     3841 attgcgtcaa cggtgcgaag gtattgcgta acgtttctgc ggttacggtt gtgccgaacg
     3901 gatgtccggc gaattgcggg tttgtcatta atccaccaat aattccagcg cgcggtcaac
     3961 ggcattcacc agcgcatcca catcactctt tgtattatat ggcgcaaaag aggcgcgcag
     4021 tgtgccggtt acgcctaatt ctgccagtag cggctgagca caatgttgcc cggcccgcaa
     4081 ggcaataccg tactccgcca gtagcgtcac catatcgctg tgatgaacgc cagcaaaatc
     4141 aaaggccagc aggctggaat cctggcagcg gaatgaacga aagcctggac gtttcgccag
     4201 cgcatcttcc gccagcgttg ctaagctatg gctccagttt tcggcctggt tgatatcgta
     4261 atctgccagc cattccagcg ccgcgcttaa tcctatgaca ccagccacat ttggcgttcc
     4321 tgcttccagt ttccacggcg cagattgagt cgtgaagccg tcaaaactca cttcgtgaat
     4381 cattttgccg ccacccagcc agggcgacat cgcttccagc agttctgatt tgccatacag
     4441 cacgccgata cccgtcgggc catacagttt gtgaccagag aaagcataga aatcgatatc
     4501 cagttgctga acatccgcgg ggaaatgcac cgccccctga gcaccatcaa ccatcaccac
     4561 catccctgct gaatgagcaa aggtaatcgc tcgcgccaga tccgggcaac cgccagtaac
     4621 gttcgacatc tgactcaacg ccagaatccg actacgggga gtaatcagtt ctggcaacaa
     4681 atcgacatcc ggcagtcgct gcgcattaag cggcaatttc accactttgg ctccagtttg
     4741 ttgggcgacc atcagccagg ggacgaggtt ggcgtggtgt tctgccacgc tgacaataat
     4801 ctcatcgccc ggttgcagac gcggacgcgc atagcattgt gccaccatgt tgatggattc
     4861 agtggtgccg cgcgtccaga cgatagtttt atcatccggt gcattcagta attgcgccac
     4921 tttctctcgt gcagcttcat aacgcgcggt caggcgttgg gcttcggcaa actggctgcg
     4981 atggacgttt ccggcgctca ggctgtaaaa ctgtcgagtg gcttcaacca cggcttcagg
     5041 tttaagcgcg gtcgcggcgc tgtcgagata gacgcccgca tcctgtagtg cgggaaactg
     5101 ggcgcgaaac tgcgcgggat taaaaacgtt catggtactc ctcggcttga tgcaccgatc
     5161 gtgacgcaaa attcactttg atacaaggag agtgctaacc atcagaatta tctggatatc
     5221 ctggcgaagc cgcgtaagta acatatgctg aatagtgtta ggcgttaatt ttagcctgtt
     5281 aatcaatact attaagattt attaatcgct ttaaggagaa gatgatgaaa aagactgccg
     5341 caattatttc tgcctgtatg ctgacttttg ccctgagcgc ctgttccggt tcgaactatg
     5401 tgatgcacac caatgacgga cgtaccatcg tctctgacgg caaaccacag actgataacg
     5461 ataccggtat gatttcgtat aaagacgcta atggcaacaa acagcagatc aaccgtactg
     5521 acgtgaaaga gatggtcgaa ctggatcagt aattcgcgat cgcaaggtaa aaaaaagcac
     5581 cgcaattagg cggtgctaca ttaatcacta tggacagaca gggtaaatgt acaggaagtg
     5641 aaaaaaggta gctttgctac catggtctga atcgcagacc aattgcaaac acaacaacac
     5701 aacatcacaa ccgtaagcca aaagttcacc agaacacgca ttccgataaa acttttcgtt
     5761 ccggctcagg aagtgccgcc actataggta tttgctggta gaagctcaac ggacaattta
     5821 taatggctca gattaaaaaa actaataggt tacatagtgt gatctaattg ttaaattcat
     5881 ttaacatcaa agtttaatag ccatgtctaa acgattacca ccgctaaatg ccttacgagt
     5941 ttttgatgcc gcagcacgcc atttaagttt cactcgcgca gcagaagagc tttttgtgac
     6001 ccaggccgca gtaagtcatc aaatcaagtc tcttgaggat tttttggggc taaaactgtt
     6061 ccgccgccgt aatcgttcac tcctgctgac cgaggaaggg caaagctatt tcctcgatat
     6121 caaagagata ttttcgcaat taaccgaagc gacgcgtaaa ctccaggccc gtagcgccaa
     6181 gggggcgttg acggtcagtt tactccccag tttcgccatt cattggttgg ttccgcgact
     6241 ttccagcttt aattcagctt atccgggaat tgacgttcga atccaggcgg ttgatcgtca
     6301 ggaagataag ctggcggatg atgttgatgt ggcgatattt tatggtcggg gcaactggcc
     6361 ggggctacgg gtggaaaaac tgtacgccga atatttattg ccggtgtgtt cgccgctact
     6421 gctgactggc gaaaaaccct tgaagacacc ggaagatctg gctaaacata cgttattaca
     6481 tgatgcttcg cgccgtgact ggcagacata tacccgacag ttggggttaa atcatatcaa
     6541 cgttcagcaa gggccaattt ttagccatag cgccatggtg ctgcaagcgg ctatccacgg
     6601 gcagggagtg gcgctggcaa ataacgtgat ggcgcaatct gaaatcgagg ccggacgtct
     6661 tgtttgcccg tttaatgatg ttctggtcag taaaaacgct ttttatctgg tttgtcatga
     6721 cagccaggca gaactgggta aaatagccgc ctttcgccaa tggatcctgg cgaaagccgc
     6781 tgctgaacaa gaaaaattcc gctttcgtta tgaacaataa tttacgtagg gtacgaccat
     6841 gaccagccgt tttatgctga ttttcgccgc cattagcggc ttcatttttg tggctctggg
     6901 cgcttttggc gcgcatgtgt taagtaaaac catgggggcc gttgagatgg gctggatcca
     6961 gaccggcctc gaataccagg cgtttcatac gctggcgatc ttaggtctgg cggtggcaat
     7021 gcagcgtcgc atcagtatct ggttttactg gagtagcgtt ttcctcgcgt taggcacggt
     7081 gttgttcagc ggcagccttt attgcctggc gctgtcccat ctgcgtttgt gggcgtttgt
     7141 cactccggtt ggcggcgtga gcttcctcgc gggctgggcg ttaatgttag ttggtgctat
     7201 ccgtttaaag cgcaagggcg taagtcatga ataaggttgt attgctgtgc cgtccgggct
     7261 ttgaaaaaga gtgcgccgca gaaattaccg ataaagccgg ccagcgggaa attttcggtt
     7321 ttgcccgcgt gaaagagaat tcgggttatg tcatttatga atgttatcaa cctgatgatg
     7381 gcgataagtt aatccgtgag ctgccgttca gttcattaat ttttgcccgc cagtggtttg
     7441 tggtggggga actcctgcag catttgccgc cagaagatcg tattaccccc attgtcggca
     7501 tgttacaggg cgtagtagag aagggcggtg aactgcgtgt tgaagttgcc gataccaacg
     7561 aaagcaaaga gttgctgaaa ttctgccgta aatttactgt tccgctacgc gctgccttgc
     7621 gcgatgccgg ggtgctggcg aactatgaaa cgccgaagcg tccggttgtg catgtattct
     7681 ttattgcacc aggctgctgc tataccggtt actcatacag caacaataat tcgccgttct
     7741 atatgggcat tccgcgcctg aaatttccgg cagaggcgcc gagtcgttcc acgctcaaac
     7801 tggaagaggc atttcatgtg tttattcctg cggatgagtg ggatgaacgc ctggcgaacg
     7861 ggatgtgggc ggtggattta ggcgcttgcc ctggcggctg gacctaccaa ctggtgaagc
     7921 gcaacatgtg ggtttattcc gtcgacaacg gcccgatggc gcaaagtctg atggataccg
     7981 ggcaggtgac gtggctgcgg gaagacggtt tcaaattccg tccgacacgc agcaatatct
     8041 cctggatggt atgcgatatg gttgaaaaac cggctaaagt tgcggcattg atggcgcagt
     8101 ggctggttaa tggctggtgc cgtgaaacca ttttcaatct caaactgccg atgaaaaaac
     8161 gctacgaaga agtatcacac aatctggcgt atattcaggc acagcttgat gaacatggca
     8221 taaatgctca gattcaggcg cggcagttgt atcacgatcg cgaagaagtg acggtgcacg
     8281 tccgccgcat ctgggctgcg gtgggtggtc gtcgcgacga gcgataacag gcaaggccgg
     8341 ggcgtcgtct tcggcctgct accctttccg tcaggctgtt accaaagaag ttgcaacctg
     8401 gcgctcatca gaaataatgt gcgttacctc atccagatgc ccgatgcggg cttcccctga
     8461 acgattaaat ttacttttat caatcaataa caacgattgc gcggcacgtt ttaatagcat
     8521 cgatttgtaa tcagcgttga tcgcattgga gtcccacagt gcgccgctgc tatcgatccc
     8581 ttcacaagaa aaaataaaca gatcgatttc cagcgattta agttgggaaa tcagcgaggg
     8641 attgacgtaa cagccatatt tgcgctcaag tgtgccgccg gaactgatca gttgaatgcg
     8701 ttcgcgttta ccgagttcat agcaaatcgg atggctattg gtgaagacct gaatgttgat
     8761 gtcaggcaac tggcgtgcca gataccagca agttgaactg gcgtctaagg ctatcaccat
     8821 cccttcttca atccacgcga gcgcctcgcg cgcgatatct gctttatgcg cataatggct
     8881 tttcagcctg atgtgaaagg gatcgccact gtcttgattt tgacggtgga tatatttagc
     8941 gcgtccatga ttgcgcagaa ttttaccctg cgtctgtaat tcattgagat cgcgacgaat
     9001 ggtttcttta ctgaccttta gctgttcaga gagagcttcc gtggtcaggc tggtatggtt
     9061 cagcagcagg tcgactatcg cttgctggcg tgccgctttc atatttttca ccccatcatt
     9121 cgataaccgc ccgcgtcatg cgggcgtacc ggtatgagat tacggtgtta cccctttttt
     9181 taaaagaata ttcccgtact tcgctcgttc gcctgtgata acgatcgcaa aggctttttg
     9241 cgcccgttca taaaacgcaa aacgattgat gcggatgatg tcaggacacg gggcttgtag
     9301 tgaaagcgca ttacggtaac gtcgttctac ttcaggatcg agagtgtcac cttctaccgc
     9361 cgccatcatc accagcggcg gtgcataact gtccagttca aataacggga taatcgcctg
     9421 gagcaagtcg ctcaccaaca ggccatcagc gcggatcacc tgcggtccca tcgaatgggc
     9481 gggaaagtga gcatcggaaa aaataatttc atctccatgt cccatctctg ccagcacttt
     9541 caatagttcg ggagaaatta acggcgaaat tgttttcagc atttcacact tcctctataa
     9601 attcaggttc agtttgcggg tagaaataac ggtactgata atgaatctgt gcgcgggctt
     9661 cttcagggct gttaaattcc cctacgccat accaaccgaa cagcgcagct cctgcgacgg
     9721 tcgtttcggc gtcgtcgaga acttttaccg gaatatcaag catattggct ttaatctgat
     9781 tccacaatgt gttgcgactt cctccaccga ctaacaataa ttcagaggcc ttaaagtgcc
     9841 cgattttttc cagcatctgt agattgcgct gtaattgcgc agttaaccct tccagcgccg
     9901 cgcgatagaa atgcccccgc gtggtattaa gcgtcactcc ttgccagcca gcgttctgac
     9961 acgacaataa atcacactgc atttttacgc catccgcgct aggcgcgata agacgagctt
    10021 cttcaatcaa catttgccag ggtgtttcag ccgtccagaa cagttttctc acccattcca
    10081 gcacgccgga tgccagccat tgcatacctg ggttatacaa ccctgcctgg ctatccagtt
    10141 cgcaggtgga accggcgtac tgacttaaca gcgaagtatc aacctgggcg ctacggacca
    10201 ttaaaatttc ccatgtaccg gaagagagca cgggttcatt ttggtcggca ccagcgccaa
    10261 aaagggcgaa ctgggtatcg tgacctgcgg aaatcaccgg tatgccaacg ggtaagccga
    10321 gcattgctgc ggcgctgttc tgtagcgtac caatctgttc acccgcttcc accagacgag
    10381 ggaagagtcg gcgtggaata ccagtggctt gtaaaatttg cggactgaaa tcgcgttgct
    10441 ggatatccag catctggctg gttccggcca tcgtgatatc agtagtgaat tcgccggtta
    10501 aacggtggtt aatcagcgac gaaataaaga accaggcgtg cgtgcgttcc agcagttgtg
    10561 gatgattttc tttcaaccac accaacttat ataacgtatt gaaactaaag gctccgacgc
    10621 cagaaatagc ctgcaaccgc tgtgcggaga tcaactgttc aatattgtcc ataaccgctg
    10681 ctgttcgcgg acatttccag ctaatgatcg gatagagcag attgccttgc ttatctacca
    10741 gagcgccatc cacaccaaag gtggtgacgg cgataccgcg gatgtggcat tcagtcagtt
    10801 cactattgat ttgccgacag caatcagcaa agcgttgcaa aatggcgtct aaagaccact
    10861 ggtgccaggt gttgttttcc atcgcgatat cgctggcatt aggcgttgag gcgcgggcaa
    10921 caatttttcc ctgccgatta accgcgatgg ccctgacatt ggtcgcgcca cagtcgagta
    10981 ccaggataac ttcttgtttc ataatcgctc ctgcaagact tcaatatcca tgccgtgcgc
    11041 agcccaggca gaaggacgat acactttggt ctcttcaacg ttgtgcatac ataccgggat
    11101 acgcagcatg gaggcgagag tgataaagtc agcgccaacg tggccgatgg tcagaacccc
    11161 atggttagcg ccccagttcg ccattaccga gtacacatcc gtaaacggcc ctttaccggt
    11221 gaggcgcggt gcaaaccagg tggttggcca ggttgagttg gtgcgtttgt tgaggatgtc
    11281 atgcacatcc ttcggcaatt ccacgctcca gccttccgcg atttgcagta ccggtcccag
    11341 gcctttgatg atgttgacac gagtcatggt gaacgggacg ccgccttcgg taaggaagcg
    11401 ggaagagtaa ccgccgccac ggaagtattc gtggatcgcc gggcaccatt cggtagcggc
    11461 gaggcaagcg tcagcctctt gctgagagat ttcccagtgc ggcttcatcg tcgggttacc
    11521 ttcgctgtcg cgttgtttac aggaaccgtc cagcgcagca gaacctgagt tgatcaaatg
    11581 gatgatgccg tgttctgcca gtccatcgag tttatgcccc gttacacgct caattgcttc
    11641 tggtgaccag taggtacgca catcggcaaa tacctgagcg gtgccggtga gctggtgacc
    11701 cattagcatt gccacgccgt taagactgtc gttttcggtc gccacgacaa agggttcgcg
    11761 cacgccattc cagtcaaatg aactgttgag gatcgcttcg gcggtgtcac cattgggata
    11821 ttgatcggtc cagtgacgtt gcccctggaa gcccgcagcg atggcgttgt agccaagtga
    11881 ttcttccacg cgaccaatat cggccagttt gctgttgcct tgcatcatgt cgcggataca
    11941 catcgccatc agtaaacttt cgcgcagaac tgcgcggctt tgctcggcat tgcgttgata
    12001 ctgtttgtta ttttcatctt cgccatagcg gaagttttta tcagcccagg ccagtgccat
    12061 ttccagttcg gcttcgtcgt aaatcttctg atcgatacgg cgacgcagtt cggtcatatc
    12121 caccgcctgg actttcattc ccagccagga ttcaaagaag ttgtgatcaa cgatggaacc
    12181 ggcgataccc atcgaaacgc cgcccagcga cagatagctt ttacctttca tgctggcgac
    12241 ggccaaaccg gcgcgggcaa agcgcagcag tttttcttca acatcggcag gaatcgatgt
    12301 gtcatcggca tcctgaacgt catgaccgta aatggagaat gccgggatgc ctttctggct
    12361 gtgagctgcc agagccgctg ccaggtaaac agcgccggga cgttcagtgc cgttaaagcc
    12421 ccaaatggct ttcgggcggg ttggatccat gtcgatggtt tcactgccat agcaccagca
    12481 aggcgttacc gtaatggtga ggcctacatt ctggctgctg aatttttctt cgcaagcagc
    12541 ggcttcagcc atacccgcga tacaggtatc ggaaatgaca cactcgacgg cagctccgca
    12601 ggcatggcgc agtttctcgg tcagcagtgc ggccgtagct ttcgccatat tcattgtttg
    12661 ttcttcaagc gactcacgaa cacccatgcg acgaccgtca ataaccgggc ggataccaat
    12721 tttcggtaag ctgatttttt tcattacaga ttcctcactt tattcggaaa atatgttcag
    12781 ttagttgccg tttgagagcg gaaacgggca aagataaaga tgaccgcgaa gcagagtgcg
    12841 gggatcagtt cagcagtggg gatgttgccc gccgcgtcac tgacaaaacc catgaccgga
    12901 gtgacaatac cgccgccaat aatggtcata acgatgaagg acgaaccgta tttggtgtcc
    12961 tggccgagat tcttaatgcc cagcgagaag attgttgggt actgaatcga cataaaggcg
    13021 ctgcataaag tcagggctat taagcccaca tgaccgccag cgaaggctga gatcaggcac
    13081 agtgccatag cgattaatgc gtaggcggcc aggactttgt gtggtgcgaa gcgactgatg
    13141 agccaggtac cggtgaaacg accaataaag aagcacacca tggttccggt taaatagtta
    13201 gcggcaaagc ctgcagtcat acctggaatt tcttctacag cgtagcgaat caaatagctc
    13261 cagcaggccg tttgtgcgcc aacgtagcag aattgcgcta atactgccca gcgccagtgg
    13321 cgaatacgcg ccaggcgaga aagcgatgcg gagaacgatc cttgtttggc gtcactgtga
    13381 ttatcactct gcaatgccgg gaatttcgtc agcatgatca gcagggcgac cagtaacacg
    13441 atagccacga tgatcatata aggtgtctgt accgataata ccaggctgtg tttatacgca
    13501 ctcaattgct ctggagacat tttatcgaga acgtcttgcg attgatgtgg cacgttagac
    13561 aaaataagac tttgcccaaa gacaaccgcg ataattgcgc caaacgagtt aaatgtttgc
    13621 gcaagattta agcggaagtg accactgctt tccggcccta ataccgtaac aaaagggttt
    13681 gcggcagttt ccagacaacc taatccggct gcaataataa ataggccaac taaaaataag
    13741 gtgtagttca ttatttctgc agcgggccag aataatgcag cgcccagggc atataaaaat
    13801 aacccagtaa ta
//
LOCUS       DAJVUK010000112        13633 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.112, whole genome shotgun sequence.
ACCESSION   DAJVUK010000112 DAJVUK010000000
VERSION     DAJVUK010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13633
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.112"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..1862)
                     /gene="speC"
                     /locus_tag="OQQ57_002997"
                     /pseudo
     CDS             complement(1..1862)
                     /gene="speC"
                     /locus_tag="OQQ57_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            2260..2958
                     /locus_tag="OQQ57_002998"
     CDS             2260..2958
                     /locus_tag="OQQ57_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HCS1957680.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRISMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPTHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWFA"
     gene            3064..3139
                     /locus_tag="OQQ57_002999"
     tRNA            3064..3139
                     /locus_tag="OQQ57_002999"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3097..3099,aa:Phe,seq:gaa)
     gene            complement(3288..3824)
                     /gene="yghD"
                     /locus_tag="OQQ57_003000"
     CDS             complement(3288..3824)
                     /gene="yghD"
                     /locus_tag="OQQ57_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspM family type II secretion system protein
                     YghD"
                     /protein_id="HCS1957681.1"
                     /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV
                     VFLFSVGYYVLIWQPLSERIVQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQV
                     SRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
                     AAEKTGMVNVQRLEFGRG"
     gene            complement(3826..5004)
                     /gene="gspL"
                     /locus_tag="OQQ57_003001"
     CDS             complement(3826..5004)
                     /gene="gspL"
                     /locus_tag="OQQ57_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HCS1957682.1"
                     /translation="MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQ
                     TDAIRLYIPGEWISVWQVELPDVARKQIPTILPALLEEELNQDIDELHFAPLNIDQQL
                     ATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGVMAGDAQRVICRIDECRGWS
                     AGRALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGEP
                     EGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQA
                     EEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEM
                     RGFTFDQKRQILHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK
                     "
     gene            complement(5001..5978)
                     /gene="gspK"
                     /locus_tag="OQQ57_003002"
     CDS             complement(5001..5978)
                     /gene="gspK"
                     /locus_tag="OQQ57_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
                     /protein_id="HCS1957683.1"
                     /translation="MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQ
                     EYQQALWYSASAESLALSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQIAVTLRDAQ
                     ACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL
                     GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMIRQQININ
                     TLDVTQSVILEALFDPWLSPVQARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQL
                     KTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE"
     gene            complement(5981..6580)
                     /gene="gspJ"
                     /locus_tag="OQQ57_003003"
     CDS             complement(5981..6580)
                     /gene="gspJ"
                     /locus_tag="OQQ57_003003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspJ"
                     /protein_id="HCS1957684.1"
                     /translation="MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVADH
                     DQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGV
                     VNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
                     TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ"
     gene            complement(6577..6948)
                     /gene="gspI"
                     /locus_tag="OQQ57_003004"
     CDS             complement(6577..6948)
                     /gene="gspI"
                     /locus_tag="OQQ57_003004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HCS1957685.1"
                     /translation="MKRGFTLLEVMLVLAIFALAATAVLQIASGALSNQHVLEEKTVA
                     GWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYWRTIPLNTGNALLQAVDIEVSRH
                     EDFSSVIQSRRAWFSAVGGQQ"
     gene            complement(7008..7508)
                     /gene="gspH"
                     /locus_tag="OQQ57_003005"
     CDS             complement(7008..7508)
                     /gene="gspH"
                     /locus_tag="OQQ57_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001115132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HCS1957686.1"
                     /translation="MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSEPPAKKAAQDF
                     LTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSAQVTVPKQVQML
                     LQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
                     AAQNAC"
     gene            complement(7512..7967)
                     /gene="gspG"
                     /locus_tag="OQQ57_003006"
     CDS             complement(7512..7967)
                     /gene="gspG"
                     /locus_tag="OQQ57_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003912123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HCS1957687.1"
                     /translation="MNSLSRTHKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKA
                     NRQKAISDIVALENALDMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRL
                     PKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ"
     gene            complement(7984..9207)
                     /gene="gspF"
                     /locus_tag="OQQ57_003007"
     CDS             complement(7984..9207)
                     /gene="gspF"
                     /locus_tag="OQQ57_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HCS1957688.1"
                     /translation="MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEA
                     RMNASAGGMLQRRRHAHRRVAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHV
                     KSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
                     RQRLKSRLLQAMLYPLVMLVVATGVVTILLTAVVPKIIEQFDHLGHALPSSTRALIAM
                     SDALQASGVYWLAGLLALLVLGQWLLKNPTMRLRWDKTLLRLPVTGRVARGLNTARFS
                     RTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGSSLRAALAELRLFPP
                     MMLYIIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVI
                     AILEPMLQLNNMVGM"
     gene            complement(9207..10699)
                     /gene="gspE"
                     /locus_tag="OQQ57_003008"
                     /pseudo
     CDS             complement(9207..10699)
                     /gene="gspE"
                     /locus_tag="OQQ57_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
     gene            complement(10699..12759)
                     /gene="gspD"
                     /locus_tag="OQQ57_003009"
                     /pseudo
     CDS             complement(10699..12759)
                     /gene="gspD"
                     /locus_tag="OQQ57_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020234996.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
     gene            complement(12789..13618)
                     /gene="gspC"
                     /locus_tag="OQQ57_003010"
                     /pseudo
     CDS             complement(12789..13618)
                     /gene="gspC"
                     /locus_tag="OQQ57_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238556.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
BASE COUNT         3055 a         3931 c         3516 g         3131 t
ORIGIN      
        1 tatgcgcatc ctgggggttc atcaccactg acgggaaact ctgctggcgg aacatcgctt
       61 tttgtaggtc tttgacgtcg aaactgacat acagatcgtg catctcctga cacaactggc
      121 gcaaagtgta gtcgcgatag cgcaccggat atttgttata aacgctcggc aacacctcag
      181 ccagcggcga gtcatcctca atatgctgtt caaactgcgc caacatctct accagttgtg
      241 ccagcttctc gtggctttcc gccggagtta ataagaacag aatggagttg agatcgcact
      301 tctccggcac aatgccgttc tcacgcagat agtgcgccag aatcgtcgcc ggaacgccaa
      361 agtcgctata ttcgccggtt tcggcattga tacctggtgt agtgagtaac agcttgcacg
      421 gatcaacaaa atactgatcc gcggcatatc cttcaaagcc gtgccacttc gcccccggct
      481 caaaactgaa aaaacggcgg tcgctggcta acactgatgt cggataatcc tgccacaatt
      541 tgccatcaac aacgggcggg ataaacgggc ggaacagctt acagcgcgca agaatagcct
      601 tgcgcgactc aatacccaac tcaacgcact cagcccacag ccgacgccca ctctcccctt
      661 catgaatttt ggcgttaaca tccagtgcag caaacagcgg atagaaaggg ctggtagaag
      721 catggagcat aaaggcgtta ttcaaccgct tatgcgggca aaaacgcgcc tgtccgcgga
      781 tatggttatc ttttttatgg atctgcgacg tctgtgagaa tcccgcctgc tgtttgtgca
      841 ccgactgagt cacaaagatc cccggatcgt tttcgttaag ttctaatagc agcggcgagc
      901 tatccgccat catcgggata aactgttcgt aaccgaccca cgcggaatca aacagaatgt
      961 aatcacacag atgcccaacg gtatcgatca cctgacgggc gttatagaca gttccgtcat
     1021 aggttcccag ctgaataatc gccaggcgaa acgggcgcgg cagctcggct ttttctggcg
     1081 caacgtcgcg aatttgctgg cgcagatact cttcattaaa acagtgcgca tcaataccgc
     1141 caatgaaacc aaacgggttg cgtgaagctt ccagatagac cggcgtcgcc cccgcctgaa
     1201 tcagcgcgcc gtgatgattc gacttatggt tgttacggtc gaagagcacc agatcgccac
     1261 gcgttaacag cgcattcgtc accactttat tcgctgccga tgtgccgttc agcacaaaat
     1321 aggttttatc ggcatgaaag actttggctg cgaatttctg cgcatctttc gccaataagc
     1381 agatcgccca attttacgtc agcgttacac atatcggcgc gaaagacgtt ctcaccaaag
     1441 aaatcgtaaa aatggcgtcc ggcaggatgc tttttaaaaa acgcaccatg ttgatgtcca
     1501 gggcaagcaa aggtgctgtt gcccatctca acgtactgcg tcagcgtgtc ataaaacggt
     1561 ggcagcaaat tctcttcata ctgacaggct gcggattcca gctccagcca ctgctgctcg
     1621 ttgccgttga ttaccgccgt aacgcccgca ggtaattcaa cagcatgttc ggaatacaaa
     1681 aacaccggta gatgaaaacc ggtgcgctta agcaacgcaa gaatgccact gcgactatcc
     1741 gcagcggtaa tgacgactgc cacgacgtcc gtaaaatcag tatctcccaa cgccaccacg
     1801 cgacgatgag aagaaagtcg ggataccagt tcactactgg cggcaatatt cattgatttc
     1861 ataagcgcaa acccgtttcg gggaagtaag aataccggac aaggtggaaa accctgcccc
     1921 atgagatatg ggtcaaactg gtcaccagct ccgaccgcca gacatcagta aaagcagaaa
     1981 cgctctgatt ttactgttgt cctgcagtga gcgtgcgtta acttcaccgc atgagcagta
     2041 acatagaaag ggaaacgttt cgcgcgaaac ggcgataagc gagagaatgt aaggaggtgg
     2101 cgtgcatcgg gcaaactccg tacagagagg agaaaattcg cgcaatcatg gcacctttcg
     2161 ctaaagcgtg caagccagga ctttgcgacc agacaagcca tcaacaaggc aaaaagttca
     2221 taataagaaa atcaaacaat acagttaaca ggaactcttg tggtcatcgg cccttttatc
     2281 aacgctagtg cagtcttact gggtggcgtt ctcggcgcac tgctcagcca acgcttaccg
     2341 gaacgtatcc gcatctccat gacatctatt tttggtctgg catcgctggg gattggtatt
     2401 ttactggttg tgaaatgcgc caaccttcca gcgatggttt tagctacgct acttggcgct
     2461 ctaattggcg aaatttgttt gctggagaaa ggtgtcaata cagcagtcgc caaagcacaa
     2521 aatctgtttc gtcactcacg taagaagcca acgcatgaat cttttattca gaattatgtc
     2581 gcgattattg tcctgttttg cgccagcggc accgggatct tcggggcgat gaacgaaggg
     2641 atgaccggcg atccgagtat tttaatcgcc aagtcatttc ttgatttctt tacggcgatg
     2701 atcttcgcct gctcgctggg tattgcggtg tcggtaatta gtatcccatt actgatcatc
     2761 cagttaacgc tggcgtgggc tgccgcgctg atattaccgc tgaccacacc gtcgatgatg
     2821 gcagacttca gcgccgtagg cggtttattg ctgctggcaa ccggattacg catctgtggc
     2881 attaaaatgt tcccggtggt caacatgctt ccagcactcc ttctggcaat gccgctttcc
     2941 gccgcctggt ttgcctgaca atgcgtgcaa tagcggcaaa gtgatgatag attgtgcagt
     3001 ctgcagtaaa ttgaagaaat ttgattgacg agacgaggcg aatcaggttt aatgcgcccc
     3061 gttgcccgga tagctcagtc ggtagagcag gggattgaaa atccccgtgt ccttggttcg
     3121 attccgagtc cgggcaccac taattcttaa gaacccgccc acaaggcggg tttttgcttt
     3181 tggatctgac aataaccttc acgaaaaaag tttgcttata aagtctgggg gaattactct
     3241 cgccacgtta acgagagtaa ttttattgat actaatctcc tgatacttta cccccgtcca
     3301 aactccagcc gctggacatt caccatccca gtcttctcag cagcactggc atcaatttgt
     3361 gtcacccgca gcgcatactt ttcatccagc gcgtttaacc agttcagcag gtcattaaac
     3421 accaccggat ctatccagac ctgaatattc tccccacgct cggctatccg cttgatgact
     3481 accgagtgcg cggaagcact gtcactgata acccgcgata cctgcgcagg cgttgttgtg
     3541 gcggattttc gcgccgcaat aatatccggc gcggcgctcc tcagtctggt gttcatcgcc
     3601 accagttgct gcaacattgt ctcctgttgt actatccgtt cgctcaacgg ctgccagatg
     3661 aggacgtaat atccgacgct aaacaggaac accaccgctg ccagtaacat gcccttttca
     3721 cgcggagaac gccccgccag gtgttgtgcc agccagtgtt cgccacggct taactggcgt
     3781 tcacgccatt gctgaaaata gtgaataaat ttatcgcgta acatgttatt tcctccgcaa
     3841 cgttacgccg ccggaaaccg catcaccctc tttctgtaac gcgtcctgtt gcacaacata
     3901 atcggttgcc agtgcactac gcagtttgtc gaaactggca aagttcgcgg cccgtagctg
     3961 gaggtgaagt atctggcgtt tttgatcaaa ggtaaaacca cgcatttcga tgtcggaaag
     4021 tgacgctgat ttcagggtgc tggctatcgc tgacaactcg gcgagcagcc gggtatcgtc
     4081 ggcctgtggg cgatattttt tcagcgccat cgtcacctga gagcgtaaat tcacaatccg
     4141 cttctgctcc gggaacaacg ttaagaactg ttcctccgcc tgggtgcggc tttgcgccac
     4201 ctgttcgctg acgctccata acgtcacgcc ccgctccact gccagcgcaa ctagaatcag
     4261 caatatcggc agaatcatca cccgccagcg cgcccactgt tttcggtagc tgacgcgagg
     4321 ctgccacggc cctgtcagca ggttcccttc cggttcgcca taagtggtaa cggcgggcag
     4381 agctgtaacg gtcaggcgtt cagcgtctgc gccagcccat gctgatagct tttccggtgc
     4441 aatgccgact acggttagcg aaagcggtaa atcctgctca ttgagctggg cgcggaacat
     4501 gaccggagcc agcgcccgcc cggcgctcca tccccggcat tcatcaatgc ggcagataac
     4561 ccgttgcgca tcgccagcca taaccccaca aggaatggac atccagtctg gcgcgacggt
     4621 agcgcgggtg atgccgtttt cctgcaacca ctgcgcaatg ttgcgcatat gctgttggtg
     4681 aatcactgct acggttgcca gttgctggtc gatattcaac ggggcgaaat gcagttcatc
     4741 gatatcctgg ttcagctctt cttccagtaa ggcgggcaga atggtcggta tctgcttacg
     4801 ggcgacatca ggcagttcaa cctgccagac gctgatccat tcgccgggaa tgtagagtcg
     4861 aatcgcatcg gtttgcagcc attgctggag ctgttcgtta gcaacgtcag accagatacc
     4921 gtgctccaca tcgggtgtac ggcgctgcca atggatggga tcagcggcgc aaagcgggaa
     4981 aaaaatctca aggatggaac tcactcactt tctcctgtct gatgccagag aaccgaaaag
     5041 tgttgtgggc ccatgcggac aattaacgag ttcatcgtca gttcaatctc attcacggtg
     5101 atatctgaac gcagccagaa gtaattgctg tccacgctca ggacggtttt tagctgtttt
     5161 ttagtacgct catcgacgtc agcaagtagc ggctgtgcaa gaaactgatc gacatcttcc
     5221 cagcccttcg ccggacgttg ttgtaataac gcccgcgcct gaacggggct taaccacggg
     5281 tcaaacagcg cctcaagaat cacactttgc gtgacgtcta aagtattgat gttgatttgc
     5341 tggcggatca tcggcagcgc acagaccagc ggtttcagtt tttgataaag cccggcgtcc
     5401 attccctgta ccacgcgcat ctcactgata tcagccagcg gttgattggc ggcgtagaac
     5461 ggcaccgaac gggcgagata ctcgctgtct tcacggccca gacgtgtctg cacgctgcgg
     5521 tcctcgtcaa taaactccca caggctttcg gctatcagtt cggcccgata agcaggcaca
     5581 tccaggcgcg agatcagggc aatcaactgt tgtaccgcaa gcggacgcga cgccgttgtc
     5641 ggctgagcaa gggcattcag gttaaagcaa gcctgtgcgt cacgcagggt gaccgcaatt
     5701 tgcccctgcg gcagagggaa gaaacgaggg ccggatgccc acggctgtgc cagatgcacg
     5761 cgcttttcat ttttcaggct cagactgagc gcgctcagcg ccaggctttc cgcactggcg
     5821 ctgtaccaca gcgcctgctg gtactcctgc tggctgcgcg ttcgcccaag ttgttgctgc
     5881 attcgcccgg aaagcgtgat ggttaccagc atcataaccg ccagcaatac cagcaccacg
     5941 accagtgcca ttccgcgttt tggtggtgag gtgatcatga ttattgcggc ccgcgtaaca
     6001 accagatgcg ttcaatctcg ccccattgcg gcgaatgcag ggtcatgcgt accgccacag
     6061 ggatcgcctg tactgacgac cagctctcct gccagcgcgt gccgtcgtag aactgcaaac
     6121 ggagcgaatc ggccggaatc aacttttgca ttgtcggctt cacgctgcct gcggcatcgg
     6181 tcagcggcca ggctaaccgt tcgagataac cgtcatgaat gcggtaaccg acggtgagca
     6241 gattgctgcg cggcagacgc atcaacgggt taaccacacc gccgcgcaca aaacgcattc
     6301 cttcactctc agacgccagc acgccagcgc cagccagtaa agctggttca cgctggccct
     6361 gatcgcctct taccggacgc ggcatcattt gggtcagatc gtgggtcaga aaactcatcg
     6421 tttgctgcat gaggtttagt ttttgatcgt gatcggcgac ggcgctattc acgcgcgtga
     6481 cgccgttagt cacctgctgc gccatcagtg ccagcgaggc aaaaatggca attgccacca
     6541 acatttccag taacgtgaaa ccagcgcgag tccttctcac tgttggcctc ccacggcgct
     6601 aaaccaggcg cgtcgtgact gaatcaccga cgaaaagtct tcgtgacggc tgacttcaat
     6661 atccaccgcc tggagcagcg cgttgcctgt attcaatggg attgttcgcc agtaccagcg
     6721 gcttcctgcc atatcgctct cgccctgatg cctgaccgcc cgctgctcac gggtcatcag
     6781 gtagagcagc gcagtctggt tttcagctac ccagcccgct accgtttttt cctcaagaac
     6841 gtgctgatta ctcagcgcac cgctggcaat ctgtaacacc gccgtggcag ccagcgcaaa
     6901 aatcgccagc acgagcatca cttccagcaa ggtaaatccg cgcttcatgg catcctctca
     6961 tcacattgat tgagggataa cgcgccatcg tgtgccagct ttaccgctca acatgcgttt
     7021 tgcgccgccg agtagaagcg cagcgtaaac ggcgtggcgg gttcaaaagg cgaaaaacgg
     7081 atctgcggcg tcttcttttt cgcctctttt tgcaactcca gttcaatatc gtgcagcgtc
     7141 aggcgacgac gttgcagctc cagcgcatat tccttctgcc agatatcact tccgggttgt
     7201 aacagcatct gcacctgttt cggcaccgta acctgtgccg ataaccgggt cgcagaaacg
     7261 ggcaaccact gcccctgacg acgctgcata aactgatagc caggcgggtc gattagcaca
     7321 ccgagtgtct gtccttcaat cactgccctg tccttaaact gcgcaaagcg agtcagaaaa
     7381 tcctgtgccg cttttttcgc gggcggttca gaatcggtcg caaacgtctg taccacgccc
     7441 gcactggcaa ggccgataag gaaaatcacc agcatgattt ccagaagtgt gaatccgcgt
     7501 tcaggcactg cttactgaaa ctcctgcaaa ttccagttac cgatatctgc gccagcgcct
     7561 tccccgtttt cctgaccatc cgcccccagg gtataaacat caaacagtcc tttttcaccc
     7621 gggctgagat actgataatc attgccccac ggatcctttg gcagtcgttt gatgtatcca
     7681 ccagtacggt agttgcggga gtccgccata ttggctggct gctggatcag cgcttccagc
     7741 ccctgttctg tggtcggata acgcccgtta tccagtcggt acatatctag tgcgttttcc
     7801 agcgccacga tatcgctgat ggctttttgc cgattggctt tctctttgtt gcccaacagg
     7861 ttaggcacca ccagacttgc caggacgcca agaataacaa tcaccaccat cacttccagc
     7921 agggtaaaac ctgcccgtgg tttgtgtgtg cgggataacg aattcatgtg ataactccgt
     7981 aaattacatt ccaaccatat tattcagttg cagcatcggc tcgaggatgg cgatgacaat
     8041 aaacagcacc acgcccgcca tcatcaccac cagcgcaggc tcaaacagcc ccaacgccag
     8101 ccccacctgg gtatcaaatt cccgttcctg gttaacagcg gcctgctcaa gcatggtttc
     8161 cagttcgccg ctctgttcgc cggaagcgat aatgtacagc atcatcggcg ggaacaggcg
     8221 caactccgcc agcgcggcgc gcagactgct tccttcgcgg acgcgatctg ccgccagcag
     8281 cagttgttgt tcgacatagc gatttgccga cacggcggca gcggtctgaa tgccttccag
     8341 tagcggaaca ctgctggcgg tgaggatgct taatgtgcgg gaaaaacgcg ccgtattcag
     8401 cccgcgcgca acacggcccg tcacgggcag acgcagcaag gttttatccc agcgcaggcg
     8461 catagtagga tttttaagta gccattgccc cagcaccaga agcgccagca atcccgccag
     8521 ccagtaaacg ccgctggcct gtaacgcatc actcatagcg ataagcgcac gggtggagga
     8581 gggtagcgcg tgtccgagat gatcaaactg ttcgatgatt ttcggcacca ctgccgtcag
     8641 caaaatagtg accacgcccg ttgccaccac cagcataacc agcggataga gcatggcctg
     8701 caatagacgt gatttcaggc gctgtcgctg ttcggtgtaa tctgccaggc gattgagcac
     8761 cacgtcgaga tgcccggatt tttctccggc agcgaccatc gaacaaaaca gggaatcaaa
     8821 gacgcgggga tgttcgcgca ggctgtccga cagggtataa ccttcctgaa tccggctgcg
     8881 cagcgccatt ccgaggctct tcacatgcag tttttcactt tgctcactga ccgcctgcaa
     8941 gcaggtttcc aacggcattg ctgcctgcac cagcgttgcc agttggcgcg tgaacagcgc
     9001 cagatctgcc gccgccacgc gacgatgtgc gtgccgccga cgctgcaaca ttccccctgc
     9061 cgatgcattc atcctggctt caatgtgcac ggggataagc tctttaccgc gcaacaactg
     9121 gcgggcatga cgcgcggaat ccgcctcaat catgcctttg gttttgcgac cattacgctc
     9181 cagcgcctga tagtaaaaca gtgccattac gcctccatgg ttacccgcag aacttcatcg
     9241 agagaggttt ctccggcgag cactttctca atgccgttgc tgcggatacc cgcagagtgt
     9301 tgccggacat aacgttccag ctccagctcc ccggcctgac ggtggatcaa atcacgcaat
     9361 gtggcatcca ccacgtcagc tcatggatgg cagtccgtcc gcggaaacct ttgtgattac
     9421 aggcggggca gccctgcgga tggtacagag tgacggttcg cgcatcggta atgcccagca
     9481 ggcgtttttc ttcgtcagtg gcaggcgcgg cctgacggca gtcgggacac agcgtgcgga
     9541 ccagtcgctg cgccatcacg cccgtcagac tggaagagag caggaaaggc tccacgccca
     9601 tatcctgcaa acgcgtgatc gcccccaccg ccgtgttggt atgcagcgtg gaaaggacca
     9661 ggtgtccggt aagcgatgcc tgaacagcga tttctgcggt ttcggtatcg cggatttcac
     9721 cgaccatcac cacatccggg tcctgacgca aaatcgcgcg caggccacgg gcgaaggtca
     9781 tgccgacgcg ggtgttaacc tgtgtctgac cgatcccttc aatcatgtat tcgatggggt
     9841 cttcaaccgt gagaatgtta cgcgaatggt tgttcagctc ctgcaatccg gcgtacagcg
     9901 tggtgctttt gccggaaccc gtcggccccg tcaccagaaa gatgccgtgc ggtttgtgta
     9961 acagctggcg caactgcacg gtcagttgct ggctaagccc cagacgctcc agcgtcaggc
    10021 gggcctggtt tttgtccagc agtcgcagca ccacgcgctc gccccaggca gaaggcatgg
    10081 tggagacacg cacgtcaatc gcccggccgc ccagcagcag cgcaatacgt ccatcctgcg
    10141 gtacgcgctt ttcggcgata tccagccgtg ccatcacctt gatacgcgat accagcagcg
    10201 aggccagttt gcgccccggg cgcagcattt catgtaatgt gccgtcaacg cgaaaacgga
    10261 tcaccagact cttttcaaac gtctcgatgt ggatatccga agcgccttct ttaatcgcct
    10321 ctgccagcat ggcgttgatc agtttgatga tcggcgcatc gtcgtcactt tccagcagat
    10381 cttccgtttc tggcagttct tccgcgagag taaaaaagtc ctcagcagaa ccgagatctt
    10441 ccatcagctg gcgagcctcg gaagagtccc gctgccagac cgcattcagc cgctgttcaa
    10501 attcggcctc gtcgatttgc cgcagcgtaa agggcgcgtt cagcccccgc tgcagctcct
    10561 gcaaaacaga gagcgatagc ggatgaacgt ggaggatctc cagcgacgct tcgcaccatg
    10621 ccaccaggct aaaccgacgg ctgaaactgt agggcagacg cacggtcttg gcggtggttt
    10681 cctgtgctac aggcaccatt aacgcgttct cccggcattg aggaacgcgc gaacttccgg
    10741 cggtaaggcc tggttttgcg ctggcagtac cggctgtgcg gtgtgcggca tcaggcttaa
    10801 accttgctca tcacgataga tctgttcggc gcgcatatag ttatatttgc gctgcgacac
    10861 gccgtctgcc gccataccgt catgcagaat ggtcgggcgg ataaacacca tcaggttacg
    10921 tttttctttt ttatccgccg tcgatttaaa caggttacca atcaatggga tatcgcccag
    10981 cagaggcact ttcgccacgc tttctcccgc ctgatcgtcc atcagaccac caagcacaat
    11041 cagctcacca tcgttagcca gcacggtggt tttcagtttg cgctcaccaa acaccacgtc
    11101 gaggctggtc tgtccttcca ccttcgagac ttcctgctca atcaccatct gtaccgcgtt
    11161 accttcgtta atctgcggcg tgactttcag catgatgccg acttttttcc tttctactgt
    11221 attgaaagga ttgctgttat tggagccaac ggtagagccg gttaataccg gaacgtccta
    11281 gcccaccatg aagaaggctt cctggttgtc cagcgtagtg atgctcggcg tggagagaac
    11341 gttcgagctg gagtcgtttt taaccgcctg caccagtgcc atccagtcgc ctttcaccac
    11401 gccaaccgcc gtaccgctaa atccagaaag aagctgggcg agtgtggaga gatcgccgtt
    11461 ggtatccgga ttaatggtgg tagcgccgtt ttcactgatc accgtcgagc ctttctgcgg
    11521 tttcgcctga gaaatggctg cccccagcgt accgataggg atctgcgtac cattagcaaa
    11581 ctgcattaat ccggcatctt tcgacgccca ctgcacgccg aagttgatat tgctaccttc
    11641 ggcaacttcc acgatcaacg cctcgacgtg cacctgagca cggcgaatat ccagttgttc
    11701 aattacgctt tgcagcgact gcatgatgtc ctgcggcgcg gttacaatca gggcattact
    11761 gtgtttgctg gcggcgatgg atacaacctc acgcccgcta ccgaccgtgc cttccgcctc
    11821 ttctttagcc gccgtgagcg tgccgctgac ctgtttcagc acatcgacca gatcttcggc
    11881 tttgctgtat ttgagataga aaacctggct gttgccgctg cgttccattt ctgagtccag
    11941 ccgacggatc aggcggcgca ttttgtcccg cgtggccggg tcaccactga caatcacact
    12001 gttggtgcgt tcgtcggcga caatttgaga tttcagcgtc gcaggctggt tctcgccgct
    12061 gtttttcgtc aggctttcca gcacgcgggc gatttccgaa gccgaggcgt tatccagcgg
    12121 gatcacctct tcggtgcgat tacccgcgtg atccacgcgc tggatcactt ccgtcaggcg
    12181 ctccacaacg gaggcgcgtc cggtgagcat aatcacgttg gagggatcgt aattaacaac
    12241 gttgcctgag cctgcgctgt cgatcatctg gcgcagaatc ggtgccagct cgcgtaccga
    12301 cacattacgt accggcacta ctttggtgac catttcatcg cccgcgtagt tgtcgctgcc
    12361 ttcaccgacc agcggcagcg gctcgacttt cgcagcgctg gatttcacca ccttcagcac
    12421 gtcgttttcc atcggtacga cggcataccc ctgtgcttcc agcaggttaa ggaatagctg
    12481 gtaatactgg cgttcattga gcggggtcat ggtgcgaata ctcactttcc cctgtacgcc
    12541 cggccccata atgatggttt tattaaggtt agcgccgacg gtttcgatga acgatttcag
    12601 gtcggtatct ttaaaattag cggtgaaagt ggcttcttcc gcccagaccg gtgaactgca
    12661 taatgccgct gccagcacca gcggcagtaa acgctttttt gttttgaggc cagttgtctt
    12721 cttacgccag accgacaacg taatatcacg ccaaaacacg atgaatgatt ctcctggatt
    12781 aaatgcggtt agcgcagcgc gatggaaatg tcgtggcgcg cacccttgcg taaaaccgta
    12841 agttgaatgg aatccattga aggtaactgc cgcatcagag caatcattgc tcgtggatca
    12901 gtgaaatcct gctgatttag cgcaatggcg atatcgcctt ccttgaaacc gctggcatcg
    12961 aacagagaac gatctgcccc cggcttcact gcataaccga caattccctc cttacgcaca
    13021 ggcgtaagct ggatatagtt aaaaattttc tgcggatctt tcgccagtgc ctgacgcacg
    13081 gcagtcggta tctcaactgg cgcactgaca gcaggttcag caacagcttg ctttgcttcg
    13141 tcactgacag cttttttgtt ggtcgcggca acggtggaac gctcctcttc agccaggctc
    13201 aggcgctcta tttttccctg atagcgcagc atcacatggt cgcgattgat ttcctcaatc
    13261 accgcgttgt gcgagccaag cgtttcaccc tgcaaataga cctgctgttt accgccttct
    13321 tcaataaccg cgccgggtct ggcaccaaag gcgatcccgc gcgcaccaca ttaagacgcg
    13381 tttctgccac aggcacaggt tcgggttgtt ttaccggcgt ggcgacgggc tgatatttgc
    13441 caaaccagtt ttgctggctg attaattgca cgtcattttt atcgaacgtt tttgcatccg
    13501 cacggggcgg tttattcgcc gatggggaaa cagccgtata ttccgcagaa aaggagaaat
    13561 agcgccagag tgaatgcgcc acttttgcag aaataataag cagcatcagc cagaacatcc
    13621 cgcgtacaat ttt
//
LOCUS       DAJVUK010000113        13577 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.113, whole genome shotgun sequence.
ACCESSION   DAJVUK010000113 DAJVUK010000000
VERSION     DAJVUK010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13577
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.113"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(231..1604)
                     /gene="cobA"
                     /locus_tag="OQQ57_003011"
     CDS             complement(231..1604)
                     /gene="cobA"
                     /locus_tag="OQQ57_003011"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCS1957689.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDTLNQRVSEAAEARRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFTTMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
     gene            complement(1623..2429)
                     /gene="nirC"
                     /locus_tag="OQQ57_003012"
     CDS             complement(1623..2429)
                     /gene="nirC"
                     /locus_tag="OQQ57_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HCS1957690.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKSNRPVADKFNQTETAAG"
     gene            complement(2556..2882)
                     /gene="nirD"
                     /locus_tag="OQQ57_003013"
     CDS             complement(2556..2882)
                     /gene="nirD"
                     /locus_tag="OQQ57_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HCS1957691.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            complement(2879..5422)
                     /gene="nirB"
                     /locus_tag="OQQ57_003014"
     CDS             complement(2879..5422)
                     /gene="nirB"
                     /locus_tag="OQQ57_003014"
                     /EC_number="1.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-nitrite reductase large subunit"
                     /protein_id="HCS1957692.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRIFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            complement(5684..6865)
                     /gene="tsgA"
                     /locus_tag="OQQ57_003015"
     CDS             complement(5684..6865)
                     /gene="tsgA"
                     /locus_tag="OQQ57_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HCS1957693.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
                     MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            7136..7708
                     /gene="ppiA"
                     /locus_tag="OQQ57_003016"
                     /gene_synonym="rotA"
     CDS             7136..7708
                     /gene="ppiA"
                     /locus_tag="OQQ57_003016"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HCS1957694.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGAPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            7813..7980
                     /locus_tag="OQQ57_003017"
     CDS             7813..7980
                     /locus_tag="OQQ57_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HCS1957695.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
                     RLVELRRHYER"
     gene            7970..8572
                     /locus_tag="OQQ57_003018"
     CDS             7970..8572
                     /locus_tag="OQQ57_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HCS1957696.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKTKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            8604..9167
                     /gene="pabA"
                     /locus_tag="OQQ57_003019"
     CDS             8604..9167
                     /gene="pabA"
                     /locus_tag="OQQ57_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HCS1957697.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPGSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHL"
     gene            9253..10473
                     /gene="argD/dapC"
                     /locus_tag="OQQ57_003020"
     CDS             9253..10473
                     /gene="argD/dapC"
                     /locus_tag="OQQ57_003020"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HCS1957698.1"
                     /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTASTPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMYYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPHYKGRARDFLYAGAEVGVMVLNAGPDVMRLAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(10540..12630)
                     /locus_tag="OQQ57_003021"
     CDS             complement(10540..12630)
                     /locus_tag="OQQ57_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1957699.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLRDSKA"
     gene            complement(12681..13313)
                     /gene="crp"
                     /locus_tag="OQQ57_003022"
     CDS             complement(12681..13313)
                     /gene="crp"
                     /locus_tag="OQQ57_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HCS1957700.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
BASE COUNT         3287 a         3493 c         3556 g         3241 t
ORIGIN      
        1 ttatatatta attaatattc attgattata tgaatataag cagactgctc gttaagaacg
       61 atacaggaat atttaattgg cgtcagtgag cgaatgactt aattttgtaa gtcgctgtaa
      121 cggtgaatat aacccattag cagataatat ttattaaggg gttatgtttt atttgctgaa
      181 tatataaaaa gagtcattaa gaaggccaga attctctggc ccgggttaaa ttaatggttg
      241 gagaaccagt tcagtttatc gcgcaggcca acaacccgac caataataat tagcgatgga
      301 ctgttcattt gctgagcaag ttcaccgagt tgcgtgagcg taccgtcaat cacgcgctgc
      361 gtgactgccg ttccgttttc gacaattgcc accggcattt cgccaggcat accgtgttca
      421 atcagctttt gctgaatagt cgcggcctga ttcaacccca tatagaacac cagcgtctgt
      481 ttttctgccg ccaggttttc ccagtccagc tcgccaccgg tttttaagtg tccggtaatt
      541 aagcgtacgc tctgggcata atcgcgatgc gtgagtggaa tacccgaata ggcagagcaa
      601 ccagaagctg cggtaatacc cggaaccacc gagaacggaa tacccgcgtt gcacagtgtt
      661 tccagctctt cgccaccacg gccaaaaata aacggatcgc cacctttcag ccgcaccacg
      721 cgtttgcctt tttgcgcttc ccgcagcagg atctggttaa tctcttcctg cggtacacag
      781 tggtatcccg cgcgtttgcc gacgaaaacg cgatcagcat cgcggcgtac cagattcata
      841 atatcgtcag aaaccagacg gtcgtagacc accacatctg cctgctgaat ttgttgcagt
      901 cctttcagcg tcagcagccc ggcatcgccc ggacctgcac caaccagcac cacttcaccg
      961 cgatggtcga gcggttcgtt gattaactgt tcggtcgttt cagtaatggc tttctgatcg
     1021 ttgtttgcca gcgactgcgc caggcggtcg ttaacgaaca atttctccca gaaacggcga
     1081 cgctcactca tcgtggtgaa ctgttgtttc actcgcccgc gtaattgccc ggcatatttc
     1141 gccacctggc ccagatgcaa cggcagcagt gattcgagtt tttcgcgcaa caggcgcgcc
     1201 agaaccggag aggtgccgcc agaggagacc gctaccatta gcggtgagcg gtcaataatc
     1261 gacggcataa taaagctggc ggctttcggc gcatcgacta cgttacagaa gatgcgacga
     1321 gcttcagcgg cttcgctgac gcgctggtta agcgtgtcat catccgtcgc tgcaatcgcc
     1381 agccagcagg tgtcgagaag gctttcatca aatggccctt cgacgagggt taacatgcct
     1441 gcatctgccc atgcggtgaa ctgtggaata aacgctaatg cattcaccgt taagcgagcg
     1501 cctgcgtcta acagcaacct tgctttgcgt tccgcgacat caccaccgcc gacaatcaga
     1561 cagtcgcgat cgcgtaattg gcaaaatata ggcaaatgat ccacgtaaaa accccttagt
     1621 aattaaccgg cagccgtttc agtttgatta aatttgtccg caaccggacg attcgatttc
     1681 ggcgtagcat accaataacc caatcccatg aatacggcac ctgataaagt attacccagc
     1741 gtcacccaca gcaggttatg accaataccc gccagcgtgt aggcttcgct gtggttgccg
     1801 aaccaggaga gcgcgaacag cgtcatgtta gcgatagagt gctcgtagcc ggacgcgata
     1861 aatgccagca gacaccacca gatagcgata aatttcgccg ccccttcagt gcgcagcgcc
     1921 atccagattg ccaggcaaac cagccagtta cacaatgcac ctttgaagaa gagtaccatt
     1981 gccggtgcag tggttttagc cagcgcgacg gagtgaacga tgctggtatc taccggcagc
     2041 aggctaccgc cgccccagct atagagcatg gcaacgaaga cggaaccgac caggttaccc
     2101 agccaggttt gcggcaggat tgcccacatt tgcccgtggc tgatgctgcc cgcttttacc
     2161 ccaaaggtga ggaacatggt gtgtccggtg aacagttcag aaccggcgat aatcaccagc
     2221 gttaaggcga taccaaaggt cgcgcccatc accagcggac gtacggacgg gtcgagcaaa
     2281 ttaccgagcg tgaaaatcaa gatgatccca agacccacat acgcgcccgc catggcggag
     2341 ctgacccaaa agccgagcgg gttatttgcc gacaggcgtg caatgcgcgc agcgttagcc
     2401 gcacacttat taatagtgtc tgtaaacatt tgattatcct ttaaaaaata aaaacaaaaa
     2461 aataaaacaa aaagtttaaa aaatgtcctg caatataccg aaggtaatta caggaccatg
     2521 caaaaagggg aggcattgcg cctcccgtta aaacattaac cgcgcagctg caccacgccg
     2581 tctttcactc gtgcttcgta atgtttgacg gaaaactgtt cgtcttccat gcacaagcca
     2641 tcacttaagc gaaaacgctg ttttttcagc gggctggcga cccacagctc gccctggtgt
     2701 tccgcaatca gcccgcgtga cagcacgctg gactcgaaga acggatcgat gttgctgatc
     2761 gcaaacacct ggtcgctgtg atacgggcgg aaaatcgcga cctgctcgtc gcctaacagc
     2821 gcgcagacgc cggtttcagg caggatgtca tcgattttgc agatgtcttt ccactggctc
     2881 atgcgttgtc ctccaccaga gttaccggga tacgttcata cggcgttgcc ggacggtgct
     2941 gttcgcgctc tggcaccatc tgcacgttcg ggtcacgctt gtcgctgttg atgaagtgtt
     3001 tgaagcgagt ctgcgcggac ggtgtattga ccgtttcagt ccactcacac actaccgctt
     3061 cacgcaggcg cgccatctct tcttccagat gagcgttcag ccccagtttg tcgtcaatga
     3121 tcaccgcttt caggtaatcg atgccgcctt cgaggttttc taaccacggc gcggtacgcg
     3181 tcagtttgtc ggcggtacgg atgtagaaca tcatgaagcg gtcgagatat ttgatcagcg
     3241 tttcgcgatc gatatcagct gccagcagat ccgcatgacg cggtttcatg ccgccgttgc
     3301 cgcaaacata caggttccag cctttttcag tggcgataat acccacgtct ttaccctgag
     3361 cttctgaaca ttcacgggta cagccggaga caccgaactt cattttgtgc ggcgtacgga
     3421 tgcctttgta gcggttttcc agttccacgc cgaggccgac gctgtcgcca acgccgtagc
     3481 ggcaccaggt gctacccacg caggttttcg ccatacgcag tgctttcgca taggcatgac
     3541 cggtttcgaa gccggcttca atcagctgac gccagatctc tggcagatcg tctttctgtg
     3601 cgccaaacat cgccaggcgc tgggaaccgg tgattttggt gtagagatta aattcacgcg
     3661 cgatacgacc cactgccatc agcccttccg gggtgatttc accgcccgga gaacgcggga
     3721 tcaccgagta ggtcccgtct ttctggatgt tagcgaggaa gttgtcgtta gaatcttgca
     3781 gcggagtatg ttctggcttc agaatgtatt cgttccagca ggaggccagc agcgaaccga
     3841 cggtcggttt acaaacttca caaccgtagc ctttgccgtg tttcgccagc agttcttcga
     3901 aggttttaat gccttcaacg cggatcaaat ggaacagttc ctgacgcgaa taagcaaagt
     3961 gttcgcacag gttgttgtta acttcgatgc cctgtttcgc cagttccgcg ttcagtacct
     4021 gagtgaccag cgggatacag ccaccgcagc cagtacccgc tttggtttca gctttcagcg
     4081 ccgcaactgt gtggcagcct ttgttgatgg cagcaatcag atcaccttta gtgacgtcga
     4141 agcaggagca gatttgcgcg ctgtccggca gtttatcaac accgatagac ggcttaccgc
     4201 tacccgagtg cgccggcaga atcagagaat ccgggttttc cggcagctcg atagcattca
     4261 gcaccagttg cagcaagtta ccgtagtcgc tggtatcgcc caccagtacc gcaccgagca
     4321 gggttttgtt gtcttcgctg acgatcaggc gtttgtagat ctctttgctt tcgtcgaggt
     4381 aaacgtagct acgtgcgcca ggcgtgcgac catgagcatc accaataccg cctacgtcca
     4441 cgcccagcag tttcagcttg gcgctaaggt cagcaccttc aaaggcgttt tcgctaccga
     4501 gaatatggtc aacggcgacc tgcgccattt tgtagccagg tgctaccaga ccaaatatac
     4561 ggttgttcca gcttgcgcat tcaccgatag cgtagatatc cggatcggaa gtttggcagg
     4621 aatcattaat gacgataccc ccacgcggag caacgtccag accacactgg gttgccagct
     4681 tatcgcgcgg acggataccg gtagagaaga cgataaagtc gacttccagt tcgctgccgt
     4741 cggcaaaacg catggtttta cgtgcttcga caccttcctg cacaatctca agggtgtttt
     4801 tgctggtgtg aacgcgcacg cccatacttt cgattttgcg acgcagctgc tcgccaccca
     4861 tctgatcaag ctgttccgcc atcagcatag gggcaaattc gataacgtgg gtttcaatac
     4921 ctaagttttt cagcgcgcca gcggcttcca gacctaacag gccgccacca acaacggcac
     4981 cgcgtttgct gcgacgggcg caggattcaa tggcgttgag gtcttcaatg gtgcgataga
     5041 caaagcagtc ctgagtatca gaacctttga ttggtgggat ccacgggtag gaaccggttg
     5101 ccatgatcag cttgtcataa aaaacggtac gtccggcgct ggagtgaatc accttctcct
     5161 gacggttgat ggtgatagcg cgttcgccga ccagaacttt gatgccgtgt ttctcgtaga
     5221 agccttcgcg caccagcgac agctcttcgg cggtgtggtg agagaagtaa gacgagaggt
     5281 gtacgcggtc ataagcgatg cgcggttctt cacagaaaac ggtaatatca aagttggccg
     5341 catcagattt atcaagaaga tcttcgataa agcgatggcc gaccataccg ttaccgataa
     5401 ttgcgagtct gactttgctc atttttgcct cgatttcttt tctattaccg cctaccttaa
     5461 cgattcagca accccgctta ttgatgtaaa tcaaattcac ctttatatac cccttaaggg
     5521 gtatattgct gatttgtata aattttctta agtcacggaa ttgtctgaca tttcatgttt
     5581 gtgcaaaaaa tagacaaaat gaacgggttt atagaaatag atgcacgtag cggggttaga
     5641 gaggaaaagg ccggacgacg atagtgccgt ccggcattag caattaatga gaggtcaggg
     5701 tgttatgctg acggtgacgg ctgacgaaac ctaacaggaa gcacatcaca aagacgacag
     5761 cgtacagacc gtttgctgta agcagtgccg cctgcggacc gctatgttca acaatcgggc
     5821 cggtaaccac aaaggtcaac atagtaccga tggttccgca ggtcaggaca aagttaacca
     5881 gttttggcga cggtactttg gtctgctgtg aacccagggt gatgatggtg gtatagatcg
     5941 cgctggagaa gaagcccaga gcgagaattg accacgccat atgtgctggt gttccggtgt
     6001 taaagacgta catcagaatc gcagccagac cagccagtac ggtcagaatg cgttgcaaat
     6061 caaagaagcg aagaataaag ctgaacgccc acatgccgac catgtatgac atccagaagt
     6121 tactcaccag cgtgcccgcg tcgttcaggc tcatgcccag gcctttggca tactcaggca
     6181 cccaggagat aaaacctaac tgaccgagga tgtagcacag cgccgcaaca gagagaaaca
     6241 gtacgccgat cccccacttt tctttctcta ccggagcatc cgtttttggt gcatgtttgc
     6301 ccagtgctgg gaactcacag ccgaaggtca gaataaaaat agcgacatac accagcccga
     6361 tgcaggcata aacccagtac cactcaatgc tgcgcgccag tagaaacgcg gcgatcattg
     6421 ggaaaatcat cccagccata ctgaagaagg agtcagtaaa taacaggcgg gaaccgcgct
     6481 gacgcccttc atacatttgt gttatcagga atgtaccaat cgacatagta atgccgctga
     6541 ccaccccgag aatgaacatc gccgtcgaga acagcgccag gctgtggctg aacatcaaac
     6601 cggcaaccgc cagcaccatc aggagaaagc caaaacgtaa ctgcgttttc aacgggacga
     6661 tttccatcag ccaggcgttg aggaagatag agattaaaat gccggcgttg aggaaggtga
     6721 aggtgttact catactggaa acaggcagat tgaaataatc ggcgatattt cccatcacca
     6781 tcccggtgac aataaccaac gcaccagtca gtgcgtagga gagaaagcta atccatgtga
     6841 gcttgatgcg attgctgtta gtcatgattg gcctgcgttc aaaaataaaa tggcatagcg
     6901 ggatatgccg cgagcgggtg attttaggtg attttgtgat ctgtttaaat gttttattgc
     6961 aatcggttgc taaattgcat tttaagaagt gatcttgatc acggaataaa aagtgatcgt
     7021 caggttacat atatttcaga tacgtaaaat taggtaaagg gatggccttg ttcttgaagg
     7081 ctatttagaa tctcttcact tgcttttttt ctgctctgtt tgttaaggaa atctcatgtt
     7141 caaatcgacc ctggcggcga tggctgctgt tttcgctctt tctgctcttt ctcccgcagc
     7201 aatggcagcg aaaggggccc cgcacgtatt gttgacaacc tcagctggta acatcgaact
     7261 ggagctggat aaacaaaaag cgccagtgtc tgtgcaaaac tttgtcgatt atgtgaacag
     7321 cggtttttat aacaacacta cctttcaccg cgtcattcct ggctttatga ttcagggcgg
     7381 cggtttcacc gagcagatgc agcagaaaaa accaaacccg ccaatcaaaa atgaagccga
     7441 taacggcctg cgcaacacgc gtggcaccat cgcgatggcg cgtaccgctg acaaagatag
     7501 cgccaccagc cagttcttta tcaacgttgc cgataacgcc ttccttgacc atggtcagcg
     7561 tgatttcggt tacgcggtat ttggtaaagt ggtgaaaggc atggacgtgg ccgataagat
     7621 ttcccaggtg ccgactcatg acgttggtcc gtaccagaat gtgccgtcaa aaccggtagt
     7681 tatcctttcc gctaaagtcc tgccgtaatg atttctcgcg cgggcaatct tgcccgcgct
     7741 tctgctctcc cggcgtaacc cggatttgcc gcttatactt gtggcaaatg gacacgttca
     7801 gggaggcatc aagtgaagaa actcaccgat aagcaaaagt cccgtctctg ggagcttcag
     7861 cgtaatcgta atttccaggc cagtcgccgt cttgaaggcg tcgagatgcc tttagtcact
     7921 cttactgccg cagaggcttt agcgcgcctt gtagagctga ggaggcacta tgagcgataa
     7981 attcggcgaa gggcgcgatc cgtatcttta tccaggcctt gatatcatgc gtaaccggct
     8041 gaacatccgc cagcaacaac ggctggaaca ggccgcttac gaaatgacgg cgctgcgtgc
     8101 tgcgaccatt gagcttggtc cgctggtgcg cggtttaccg catttgcgaa ctatccatcg
     8161 ccagctgtat caggatattt tcgactgggc agggcaactg cgtgaagttg atatttatca
     8221 gggcgatacg ccgttctgcc actttgctta tatagaaaaa gagggcaatg ccctgatgca
     8281 ggatctggag gaagaaggtt atctggttgg cctggagaaa acgaagttcg tcgagcggct
     8341 ggcgcattac tattgtgaaa tcaacgtgct gcatcccttc cgggtgggaa gtggtctggc
     8401 acagcggatc ttcttcgagc aactggcgat tcatgccgga tatcaactga gctggcaggg
     8461 tatcgaaaaa gaggcctgga atcaggcaaa tcagagtggg gcaatggggg atctcaccgc
     8521 actgcagatg atatttagca aagtggtaag cgaagccggg gaatctgagt aaaatagcgc
     8581 ggttctttcg taccggagcc gccatgatcc tgcttattga taactacgat tcttttacct
     8641 ggaacctcta ccagtacttt tgtgaactgg gggcggatgt gctggttaag cgcaacgatg
     8701 cgttgacgtt ggcggatatc gacgccctta aaccacaaaa aattgtcatc tcacccggcc
     8761 cctgtacgcc agatgaagcc gggatctccc ttgacgttat tcgccactat gccgggcgct
     8821 tgccgattct tggcgtctgc ctcggtcatc aggcaatggc gcaggcattt ggcggtaaag
     8881 ttgtgcgcgc cgcaaaggtc atgcacggca aaacctcgcc gattacacat aacggtgagg
     8941 gcgtatttcg ggggctggca aatccactta ccgtgacacg ctaccattcg ctggtggtgg
     9001 aacctggctc attaccagcg tgctttgacg tgacggcctg gagcgaaacc cgcgagatta
     9061 tggggattcg ccatcgccag tgggatctgg aaggtgtgca gttccatcca gaaagtattc
     9121 ttagcgaaca aggacatcaa ctgctggcta atttcctgca tctctgattt ccgattgcca
     9181 ttcagtgatt ttttatgcat attttgtgat tataatttca tatttattta tgcgtaacag
     9241 ggtgatcatg agatggcaat tgaacaaaca gcaattacac gcgcgacttt cgatgaagtg
     9301 atcctgccga tttatgctcc ggcagagttt attccggtaa aaggtcaggg cagccgaatc
     9361 tgggatcagc aaggcaagga gtatgtcgat ttcgcgggtg gcattgcagt tacggcgttg
     9421 ggccattgcc atcctgcgct ggtgaacgcg ttaaaaaccc agggcgaaac tctgtggcat
     9481 atcagtaacg ttttcaccaa tgaaccggcg ctgcgtcttg ggcgcaaact gattgaggcg
     9541 acgtttgccg aacgcgtggt gtttatgaac tccggcacgg aagctaacga aaccgccttt
     9601 aaactggcac gccattacgc ctgtgtgcgt catagcccgt tcaaaaccaa aattattgcc
     9661 ttccataacg cttttcatgg tcgctcgctg tttaccgttt cggtgggtgg gcagccaaaa
     9721 tattccgacg gctttgggcc gaaaccggca gacatcatcc acgttccctt taacgatctc
     9781 catgcagtga aagcggtgat ggatgatcac acctgtgcgg tggtggttga gccgatccag
     9841 ggcgagggcg gtgtgacggc atcgacgcca gagtttttgc agggcttgcg cgagctgtgc
     9901 gatcaacatc aggcattatt ggtgtttgat gaagtgcagt gcgggatggg gcggactggc
     9961 gatttgtttg cttacatgta ctacggtgtg acgccggata ttctgacttc tgcgaaagcg
    10021 ttaggcggcg gcttcccgat tagcgccatg ctgaccacgg cggaaattgc ttctgcgttt
    10081 catcctggtt ctcacggttc cacctacggc ggtaatcctc tggcctgtgc agtagcgggc
    10141 gcggcgtttg atatcatcaa tacccctgaa gtgctggaag gcattcaggc gaaacgccag
    10201 cgttttgttg accatttgca gaagatcgat cagcagtacg atgtgtttag cgatattcgc
    10261 ggtatggggc tgttaattgg cgcggagctg aaaccacact acaaaggtcg ggcgcgtgat
    10321 ttcctgtatg cgggtgcaga ggttggcgta atggtgctga atgccggacc ggatgtgatg
    10381 cgtttagcac cgtcgctggt ggtggaagat gcggatatcg atgaagggat gcaacgtttc
    10441 gcccacgcgg tggcgaaggt ggttggggcg taaataagac gcatcaggca aaatatgtcg
    10501 gatgcggcgt gaatgcctta tccgatggtt tagcctgtat tacgccttcg aatcccgcaa
    10561 cttgcgactc agccaaatcc cgtgatgcgg tcgctgacgc catgccatcg acgaaatggt
    10621 gtgcatggtg ttcagatgac caataacccg ctgtaaatgc tgctccagcg tacctgccgc
    10681 gccttcgtgc ggctgcatct ccggcgcatc catgatattg gcatcgccag aactacccgg
    10741 ttcgtcatac tccagtcgct gctgacaacg ctgaatggcg atttcacaag actgtaaata
    10801 ctcttgtgcc agttcaggtg gcaatgcccg gtgttcccgc gccagcgtgg tcatggcatt
    10861 aatatgctca acaataaact ggctgtgcgt tacccacagt ttcatatctg ccagataatg
    10921 gctgttaaac gccggttcct gcatcgcctg attcaatgag ttatacagag tgttatgtgc
    10981 ctgatttacc cgcattcgct gccaggccag tggcgtaggt tgcggatcct cgctaagaat
    11041 caagcgaatc gcttcctgat aggcttctaa agcgtcatgg gcgtttttac gcaataaccc
    11101 gctctgccac tgcggccaca gccagacagt accgccgaaa gcaattaaac aaccaataat
    11161 ggtatcgata agacgcggaa ggatgtattg ctcgccgttc aaccacaata gttgcagggt
    11221 atacactgcg gtaatagtaa aaccgaccgt cgcccagccg tagtttttgc gcaatatcag
    11281 gtagctggcg agggtggtaa tcagcatcaa cgtcagggtg taaccttcgg gaattttaaa
    11341 gtgcagcgcc acgcccgcaa tgattaaccc gaccacggtt cccacggagc gattcacaat
    11401 cctcagacgg gttgcgccat agccattttg tgtcaccagc aataccgtca tcaggatcca
    11461 gtacgacttc ggcagatgca gcgcggtgcc catcaggctg gcaacgctta acatcacact
    11521 gagtcgtccg gcattgcgta gcgccggaga ctttagtgac agataacttt tcagcgcagg
    11581 aagtaatggc attcgccgct gtttatcggc cagtaagtca cgggcataga gcggtttttg
    11641 ggtgcgcagc acgcgggcga tgcggctgaa atgccagtag cagaattgcc caaccggatt
    11701 atccggatgc tggcgggcga ttttttccag tgcgccaatt tgcttttcca tcgtaaaacg
    11761 cgttggcagg cgatggtaaa gaatgtcatc agccagcacg cgcaggcgag cggcgacggt
    11821 ttgcgcattc cagcggataa cttcttccgc atggctacgc tcgaccagct tttgcacctc
    11881 ttccggctga tgcaaactga ccgaaatatg ttcctgtaaa tccagcgcct cctggaaaat
    11941 acgcagcatc cgcttgtagt cagtattatt ttgcgcggaa agcatatgca tttgctgata
    12001 gcactgggta attagatcga ccgctttttg ctggcgcacc agcagcggcg gcagcgcttt
    12061 ttcagggtcg gtgtgctggg taagcaggct gtatttggct tcacaataat ctgccagttc
    12121 acggtacagc agacttagtg actcgcgcag cggttgttcg cgccagatcc agaaccaaaa
    12181 ccagttaaac aatccgtacc agagagtgcc caacgcatag atgagcaacg gttcccagac
    12241 cggcatgtat cccgccagac tgagggtaaa aatggctgcc agcagcgatg cgggaagcaa
    12301 ttttgcgtgc aatggcccca actcagcagt gacgccaagt accagcgtta atccggtcag
    12361 caaaaagggc aggggaacat cttttgccag tagcagctgt gtcagtaagc tacaggtggc
    12421 aaacagcgac gcaccaatga ttaagcgttt gaaaaaacgt ttatgaggcg tatcaaggcc
    12481 cgcaatattg caacaggcag gaacgagaga gaagagcaga ccgaatcgta attcgccaag
    12541 cattaaccca acggccacgg gcaaacatag caccagcgtt tgtcgaagtg catagttgat
    12601 atcggggtga taaatcagtc tgcgccacat cgggggaaac aaaatggcgc gctaccaggt
    12661 aacgcgccac tccgacggga ttaacgagtg ccgtaaacga cgatggtttt accgtgtgcg
    12721 gagatcaggt tctgatcttc aagcatcttc agaatgcgtc ccacggtttc acgagaacag
    12781 ccgacaatct gaccgatttc ctgacgggta attttgattt gcataccgtc cgggtgagtc
    12841 atagcgtctg gttgttttgc cagattcagc agagtctgtg caatgcggcc cgtcacgtcg
    12901 aggaacgcca ggttgcccac tttctctgaa gtgacttgca gacgacgcgc catctgtgca
    12961 gacagacgca tcagaatgtc cgggtttacc tgaatcaatt ggcgaaattt tttgtacgaa
    13021 atttcagcca cttcacaggc ggttttcgca cgtacccatg cgctacgttc ctggccctct
    13081 tcaaacaggc ccagttcgcc aataaaatca ccctgattca gataggagag gatcatttct
    13141 ttaccctctt cgtctttgat cagcactgcc acagagcctt taacgatgta gtacagcgtt
    13201 tccgcttttt caccctggtg aataagcgtg ctcttggatg ggtacttatg aatgtggcaa
    13261 tgagacaaga accattcgag agtcgggtct gtttgcggtt tgccaagcac catgcgcggt
    13321 tatcctctgt tataagcttt ctccagagcc agataacgcc gctgtctctg gattgccgaa
    13381 atatgcttcc cgctacctgg gaaggggcta tcaactgtac tgcacggtaa tgtgacgtcc
    13441 tttgcataca tgcagtacat caatgtatta ctgtagcatc ctgactgttt tagcatagct
    13501 ttcgctttgt gtctcctggt gtctcgcttc agcatgaccc aggtcgcctt ccgttgcgcg
    13561 atttggttag tacgcgt
//
LOCUS       DAJVUK010000114        13524 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.114, whole genome shotgun sequence.
ACCESSION   DAJVUK010000114 DAJVUK010000000
VERSION     DAJVUK010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13524
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.114"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..187
                     /locus_tag="OQQ57_003023"
     CDS             <1..187
                     /locus_tag="OQQ57_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCS1957701.1"
                     /translation="CWSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELL
                     NRRLSESVPCMPHKKAG"
     gene            208..909
                     /gene="mlrA"
                     /locus_tag="OQQ57_003024"
     CDS             208..909
                     /gene="mlrA"
                     /locus_tag="OQQ57_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MlrA"
                     /protein_id="HCS1957702.1"
                     /translation="MGLPLIPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIK
                     RWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYP
                     AQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARRKQGKDALVVGW
                     NIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQL
                     TSWQEQGHDIFPLGI"
     gene            969..1076
                     /locus_tag="OQQ57_003025"
     CDS             969..1076
                     /locus_tag="OQQ57_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HCS1957703.1"
                     /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG"
     gene            complement(1057..1788)
                     /gene="yehW"
                     /locus_tag="OQQ57_003026"
     CDS             complement(1057..1788)
                     /gene="yehW"
                     /locus_tag="OQQ57_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HCS1957704.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFVVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(1793..2719)
                     /gene="yehX"
                     /locus_tag="OQQ57_003027"
     CDS             complement(1793..2719)
                     /gene="yehX"
                     /locus_tag="OQQ57_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HCS1957705.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVCREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPCGTLHFQDLLEEA"
     gene            complement(2712..3869)
                     /gene="yehY"
                     /locus_tag="OQQ57_003028"
     CDS             complement(2712..3869)
                     /gene="yehY"
                     /locus_tag="OQQ57_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HCS1957706.1"
                     /translation="MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
     gene            complement(3876..4793)
                     /gene="osmF"
                     /locus_tag="OQQ57_003029"
     CDS             complement(3876..4793)
                     /gene="osmF"
                     /locus_tag="OQQ57_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
                     /protein_id="HCS1957707.1"
                     /translation="MPLSKVWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII
                     LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQ
                     QGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLKEGGTF
                     KLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQISGVNAAMA
                     YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
                     QQLNASIAVEGLDAKKVAADYLKQKGWTK"
     gene            complement(5045..7342)
                     /gene="bglX"
                     /locus_tag="OQQ57_003030"
     CDS             complement(5045..7342)
                     /gene="bglX"
                     /locus_tag="OQQ57_003030"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HCS1957708.1"
                     /translation="MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
                     GKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDMVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
     gene            7538..9253
                     /gene="dld"
                     /locus_tag="OQQ57_003031"
     CDS             7538..9253
                     /gene="dld"
                     /locus_tag="OQQ57_003031"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCS1957709.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPSSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALQRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            complement(9292..10224)
                     /gene="pbpG"
                     /locus_tag="OQQ57_003032"
     CDS             complement(9292..10224)
                     /gene="pbpG"
                     /locus_tag="OQQ57_003032"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HCS1957710.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAAITASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(10398..10985)
                     /locus_tag="OQQ57_003033"
     CDS             complement(10398..10985)
                     /locus_tag="OQQ57_003033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HCS1957711.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
                     EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            11155..11733
                     /locus_tag="OQQ57_003034"
     CDS             11155..11733
                     /locus_tag="OQQ57_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1957712.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA"
     gene            complement(11863..12624)
                     /locus_tag="OQQ57_003035"
     CDS             complement(11863..12624)
                     /locus_tag="OQQ57_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1957713.1"
                     /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA
                     REVVSHGVRAEIVQLDLGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD
                     EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL
                     GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIA
                     SLVAWLCSEGANYTTGQSLIVDGGFMLANPQFNPE"
     gene            complement(12677..>13524)
                     /gene="mdtQ"
                     /locus_tag="OQQ57_003036"
     CDS             complement(12677..>13524)
                     /gene="mdtQ"
                     /locus_tag="OQQ57_003036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001583680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HCS1957714.1"
                     /translation="QAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINAS
                     KTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRA
                     DLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLT
                     LPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQI
                     ERDTLRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALG
                     GGYKR"
BASE COUNT         3240 a         3779 c         3417 g         3088 t
ORIGIN      
        1 atgctggtca cttgccgcag gagctaatcc tagttttatc gcaagccaga tgggccacac
       61 aaacgcacaa atggtattca atgtttacgg agcatggatg aaagacaaca atcacgaaca
      121 gatagaactt cttaacagaa gactatctga aagtgtccca tgcatgcccc ataagaaagc
      181 ggggtaaaat aaaaacttgc aaaatcaatt ggtttacctt taatccctgt cacgttacgc
      241 gcgtggcaga ggcgttacgg gttgctgaaa ccgcaacgga cagacggcgg tcatcgactg
      301 ttcaacgatg ccgatattga ccggatccgc gagatcaaac gctggatcga caacggcgtg
      361 caggtcagca aagttaaaat gctgctcagt aatgaaaatg ttgatgtgca gaacggctgg
      421 cgcgatcagc aagaaacatt actgacctac ctgcaaagcg gcaatctgca tagcctgcga
      481 acgtggatca aagagcgcgg tcaggattac cccgcccaga cactcaccac acatctgttt
      541 attcctctgc gccgacggct tcagtgccaa caaccgactc tccaggcgct gctggcgatc
      601 ctcgacggcg tactgatcaa ctacatcgcc atttgtctgg cttcggcacg tagaaaacag
      661 ggtaaagatg cgctggtggt tggctggaat attcaggata ccacccgtct gtggctggag
      721 ggctggattg ccagtcaaca aggatggcgc attgatgtcc tcgcccactc gctcaatcaa
      781 ctacgccctg aactattcga aggccgtaca ttgctggtgt ggtgcggtga aaatcgaacc
      841 tccgcccaac agcagcaact caccagttgg caagaacaag gccatgatat tttcccactc
      901 ggcatttaat gattcgttaa caaatgcgct ttactgtaca atcctttcgt taacataagg
      961 agtgcaatat gcgcatagct aaaattgggg tcatcgccct gttcctgttt atggcgttag
     1021 gcggaattgg tggcgtcatg ctcgcaggtt atacctttat tttgcgtgct ggctaagcgc
     1081 ctgcaccagc ctttcaaaca ggcggtctgc aatgatcgcc gccagtgcca ccagtaacgc
     1141 cccctggatc acatacgcgg tattaaatcc gctaagcccg atgatgatgg gcgtacccag
     1201 cgtgctggcc cctaccgttg aggcgatcgt cgccgtacca atgttgataa tcaccgaagt
     1261 tcgcacgccc gccagaatca ccggagccgc cagcggtagc tcgaccttac gcagtcgctg
     1321 accacgactc attcccatac ctttcgcaac ttctgtcacg ctggcatcaa tcgctcccag
     1381 cccggcaagt gtcgcctgca ggacgggcag cacaccgtaa aggatcaagg cgataatcgc
     1441 tggttgcaga ccaaagccga tcaccggaac ggcaatcgcc agcactgcga caggcggaaa
     1501 agtctgtcca acggcggcaa tagtttccac cagtgggcga aattccgcgc cccacgggcg
     1561 agtgacagca attccggcac cagtgccaat gatcaccaca aacaaactcg aaattcccac
     1621 cagccagaaa tgagccagtg ccagagctgc aaaactttct tgctgataaa cgggtcgtgg
     1681 cagttgtggg aacaaggcag caaacagcgg ctggctgtaa ggcagccaga aaatcagtgc
     1741 cacaaacaaa gcaatgagcc agaacagcgg atcgcgcaac atcttcatac gcttacgcct
     1801 cctccagcag atcctgaaaa tgcagcgtgc cgcaaggctg gccctgcgtg ttcaccaccg
     1861 gcagcacctc gcatccccgc gcgacaaaca gggagagcgc atcgcgtagc gtcatctctt
     1921 ctgccagtgc ctcaccttct gcccgttctt cgcgacacac gtaatccgcc acactacgta
     1981 acgaaagcag gcgcacaccc agttcgctgc gcccaaaaaa ctggcggaca aaatcgtttg
     2041 ccggacgagt cagcatcgtc agcggattgc cctgctgcac cacttcaccg tgatccatca
     2101 ataccagatg ttctgccagc cgtagcgcct catcaatatc atgagtgacc agcacaatgg
     2161 tacgccccag caaacggtga atgcgcgtca tctcttgttg caacgcgccg cgcgttaccg
     2221 ggtccagtgc gccaaaaggt tcatccatca gtaagacttg cggatcggca gccagtgcgc
     2281 gcgccactcc cacacgttgc tgctgaccac cggaaagctg atgcggataa cgctcacgta
     2341 aatttgactc cagccccagt agcgccatta attcgtcgat acgatcgtca atccgcgccc
     2401 gcgaccattt ttgtaattgc ggcacggtag cgatgttttg cgccacgctc cagtggggga
     2461 acaggccaat agattgaatg gcatagccca tccggcggcg caactccagt actggcagcg
     2521 agcgaatttc ttctccggca aagcggatca ctccgctgtc atgctccacc aggcggttaa
     2581 tcattttcag ggtggtggat ttgccggagc cagatgtgcc aatcagcacc gaaaaactcc
     2641 cttcctgaaa attgagattg agatcgttaa cggctttttg tgcgccgaac agtttgctga
     2701 catggctaaa ttcaatcatt acgtttcacc ttcagcagtg cgataagcaa atcgaacagc
     2761 gcgtcggtaa gcaccgccag aacaattacc gggatcaccc ccagcaacac taaatcaatg
     2821 gcgctgctta gcagcccctg gaaaaccagc gcaccaaaac cgcctgcgcc gattaacgcc
     2881 gcaatcaccg ccatacctac agtttgcacc atcaccaccc gcaggctgcg cagaaatacc
     2941 ggtaacgcca gtggtaactg aacatgcagg aatcgctgcg ccccgctcat gcccatcgct
     3001 ctggcactct ccagcacatc gcgcgggatc tggttcaaac cgactaccac gccgcgcacc
     3061 agcggcagca aggcatagag caccagcgca atcagtgcgg gtgtcattcc ggttcctgct
     3121 atgccgagct tccccagcca cggaaaggcc gtcaccagcg cggcaagcgg cgcaatcaac
     3181 aggccaaaga gcgccaccga aggcacggtc tgaatgacat tgagcagaga aaaaattgcc
     3241 ccctgccgag cagtggaaaa gtagcaccag atgcccaacg gcacaccaat cactaacgca
     3301 ggcagcaccg caccaaacag caacgtcaga tgttgtgcca gcgcgtcgtc aaacacatcc
     3361 tgacggttgg cgtattcttt cattagtgag agatcgttaa gcgtgccgga gtacagcaac
     3421 cacagcggaa taatggcaat ctgcatatgc aacaaccagc gccacagcgg atgcgtggag
     3481 attcggcgga tggcatcgct acaggccagc aatgccagcg ccgcagccag ccagaaacca
     3541 ctgccgaggc tggtacgcgc cagcgcactg ccattttgcg ccagttgtgt cgccgccttt
     3601 cccgcgcccc acaccagcaa tacgaagacg aattgcgcca gaatgagtgc acaaatgctg
     3661 ccttttttac cgggaataaa acaggccgtc agccaggcgc aaccaacgcc caccagcatc
     3721 cagatcgttt gcggccacag ctgccagaga tgacgcccct cacccgaaac taaacgatta
     3781 ggcgcgtaac tgataaacgg cagcgccgct gcgattgccg tcagcaacag cagcagcgcc
     3841 agaacaggat taatacggaa ataagtcacg ggaaattact tcgtccaccc tttttgtttc
     3901 aggtagtcgg cagccacttt tttggcatcc agtccttcca cagcaatgct ggcattcagt
     3961 tgctgcaatg tttttgcatc gaggctggcg aagactggct gtagccactg tgccatttgc
     4021 ggatactcct tcaacaccga ctcacgcacc actggtgcag gcgcgtagat aggttgcaca
     4081 ccttgcggat cgcttaaggt ttgcagcccc agcgccgcta ccgggccgtc agtgccgtaa
     4141 gccattgcag cattaacgcc agagatttgc tgggcagcgg ctttgatcgt caccgccgtg
     4201 tcgccaccag ccagtgacag caactgatcc tgaccgagct taaagccata ggctttttca
     4261 aacgcgggta acgcatcggc gcgttcgata aactctgccg aggctgccag tttgaaggtg
     4321 ccgccctctt tcagataacg actcaggtcg gcaagcgaag tgagtttatt tttctctgcc
     4381 acatcctgac gcacggcgat agtccaggtg ttatttgcag gcgcgggcgt cagccagatt
     4441 aacttgttgt gctccgaatc gagctttttg actttctcgt aaccttgctg cgcgtttttc
     4501 cacgctgcat cgttttcatc tttaaagaag aaagcgccat tgccggtata ttccggatag
     4561 atatccagtt caccggaagt aatcgccccg cgcaccacag gagtcgttcc gagttgcact
     4621 ttattcaccg tcggtacgcc gtggctttcc agcacctgca agatgatgtt gccgagtagc
     4681 gcgccttcgg tatcgatttt tgaaccgact ttaacggggg aagccgcctg tagcggcagg
     4741 ctcacggctg ccaacataac cagtgaacct gcccagacct ttgagagtgg catgatgctt
     4801 tcctcattct tttactgttg ttttcagcga attaagagaa aagcatagtt gataatgaca
     4861 gagttagcct gagcggaagg attcagttgc agaatcagat aaatacttaa agggcatatt
     4921 ttgcccggcg tttcttgccg gatgcggcgt aaacgcctta tccggcctac aaaggtcgaa
     4981 aattcagcaa gttaagatat gaacatcagg caaagggcgc aaacgtcgcg cccttactaa
     5041 agcattacag caactcaaac tcgcctttct taacgcgtgc ggaatcagtg ccgataaaga
     5101 cattgaactt gccaggctcg gcgtcatatt tcatctgttg attccagaac ttcagcgcct
     5161 cgatatcaat cgggaagctg acagtctgag tttcgcccgg tttcagggtg attttctcaa
     5221 agcctttcag ctgcttcact ggacggctca tggaagccgt cacatcctgc aagtacatct
     5281 gtactaccgt ggccccttcg cgtttaccgg tgttcgtcac ctgcacgctg gccgtcactt
     5341 tgccgtcacg cttcatggtc ggcgcagaaa gtttcacatc agagacggtg aaagtggtat
     5401 agctcagacc atagccgaac ggataaagcg ccccgttagc ttcatcaaaa taacgcgaag
     5461 tgtatttgtt cggcttgtcg gcattatacg gacgaccggt gttcagatgg ctgtagtaca
     5521 ccgggatctg cccgacagaa cgcgggaagg acatcggcag cttgccggac gggttgtaat
     5581 cgccaaacaa cacatcggca attgcattac cgccttcagt ccccgcaaac caggtttcca
     5641 gaatcgcatc agcctgctga tcttctttca ccagcgccag cggacgcccg ttcatcagca
     5701 ccagcaccag cggtttaccg gtggctttca gcgccgcaat caagtcacgt tggctttgcg
     5761 gaatagtgat atcggtacgg ctggaggcct cgtgcgccat cccctgtgct tcaccgacca
     5821 cagccaccac catatcagat tgtttcgccg tctgcaccgc ttcatcaatc atctcttgcg
     5881 gcgagcgcgg atcgactttg accgcttctt catactgatt caggaaatcg ataatgcctt
     5941 tgtcactggt aacgttcgcc cctttggcat acagcacttt accgttttca ccgacggcat
     6001 ttttaatccc ggtcagtacg gtcacggatt gatcggcaac accggctgcg gaccagctgc
     6061 ccatcacgtc gcgtttactg tccgccagtg gcccaaccac cgcaatggtg gccgattttt
     6121 tcagcggtaa cgtttcgaga cggtttttca gcaacaccag gctttcgcgc gccacttcac
     6181 gtgcttcttt acggtgcagg cggctttcgg cattggtatc caccgggtca gactctttcg
     6241 gccccaaatg gctgtatggg tcgttaaaca atcccatatc atatttaacg ttcagtacat
     6301 ggcgggcagc atcgtccagc tcttccatcg tcactttgcc ggatttgatc aacccaggca
     6361 gatacttcga gtaatactcg tcgctcatac tcatgttgat tccggatttc agcgccacgc
     6421 gcaccgcatc ttccgggtct gccgccgtgc catgtttaat cagctctttg attgcaccgt
     6481 gatcggaaac ggtgatgcct ttaaagcccc actggtcgcg cagaacatct ttcagcagcc
     6541 aggaatcgga ggtggctggc gtgccgttca gcgagttcag cgccaccatc accgcgccgc
     6601 tgcctgcgtc cagccccgct ttgtacggcg gcatataatc attaaacagg cgctgcggac
     6661 tcatatcgac ggtgttgtac tctttaccgc cttctaccgc gccgtatgcg gcaaagtgtt
     6721 tgacgctggt catcaccgag tagcgatctg ccgggctttt accctgcatc gcttccacca
     6781 tggttttacc cattgttgag gtgagatacg tatcttcgcc aaaaccttcg gaagcacgtc
     6841 cccagcgcgg atcgcgcgag acatcgacca tcggtgccca ggtcatattc aggccatcat
     6901 ctgccgcttc ataagcagag acacgtccga ccgttttcac tgcatcgagg ttaaaagacg
     6961 aggccagacc gaggctaatc gggaacaccg tgcgctgacc gtgcagcacg tcgtaagcaa
     7021 agaaaagagg aattttcagg cggcttaatt ccatcacctg atcctgcatg gcgcggatat
     7081 cctgacgggt tacggtgttg aaaatcgccc caacctgacc gtctttgatc atctcgcgga
     7141 tcgcctcttt cgggttatcc gggccgacgc tgattaagcg cagctgacca attttctcat
     7201 caactgtcat tttcttaagc aattcggtga cgaacgcatc ccgcgcttcg ggcgtgaatg
     7261 gatggttgcc gaataaatca tccgccagtg ctggctgcag ggccagactc accgcgattc
     7321 ctactgaaca tagccatttc atatggattt ttcttcctct gttgcccgac gaggcagcga
     7381 aaatggtgca aaaaccgtag tttgccataa gcatgatgga gagagaaaaa gaatgctcag
     7441 tttattgtct gaattttcaa aatattcact cgctgaattg tcatacaagg cgctattcta
     7501 gtttgtgata ttttttcgcc accacaagga gtggaaaatg tcttccatga caacaactga
     7561 taataaagcc tttttgaatg aacttgcccg tctggtcggt cattcacacc tgctcaccga
     7621 tcccgcaaaa acggcccgct atcgcaaggg cttccgttct ggtcagggcg acgcgctggc
     7681 tgtcgttttc cctagctcac tactggaatt gtggcgggtg ctgaaagcct gtgtcaccgc
     7741 cgacaaaatt attctgatgc aggctgccaa tacaggcctg accgaaggat cgacgccaaa
     7801 cggtaacgac tatgatcgcg atatcgtgat catcagcacc ctgcgtctcg acaagctgca
     7861 cgttcttggc aagggcgaac aggtgctggc ctatccgggc accacgctct attcgctgga
     7921 aaaagccctc aaaccgctgg gacgcgaacc gcactcagtg attggatcat cgtgtatagg
     7981 cgcatcggtc atcggcggta tttgtaacaa ctccggcggc tcactggtgc aacgtggccc
     8041 ggcgtatacc gaaatgtcgt tattcgcgcg tataaatgaa gacggcaaac tgacgctggt
     8101 gaaccatctg gggattgatc tgggcgaaac gccggagcag atccttagca agctggatga
     8161 tgatcgcatc aaagatgacg atgtgcgtca cgatggtcgt cacgcccacg attatgacta
     8221 tgtccaccgc gttcgtgata ttgaagccga cacgcccgca cgttataacg ccgatcctga
     8281 tcggttattt gaatcttcag gttgcgccgg gaagctggcg gtctttgcag tacgtctaga
     8341 taccttcgaa gcggaaaaaa atcagcaggt attttatatc ggcaccaacc agccggaagt
     8401 gctgaccgaa atccgccgtc atattctggc taacttcgaa aatctgccgg ttgccgggga
     8461 atatatgcac cgggatatct acgatattgc ggaaaaatac ggcaaagaca ccttcctgat
     8521 gattgataag ttaggcaccg acaagatgcc gttcttcttt aatctcaagg gacgcaccga
     8581 tgcgatgctg gagaaagtga aattcttccg tccgcatttt actgaccgtg cgatgcaaaa
     8641 attcggtcac ctgttcccca gccatttacc gccgcgcatg aaaaactggc gcgataaata
     8701 cgagcatcat ctgctgttaa aaatggcggg cgatggcgtc ggtgaagcca aatcgtggct
     8761 ggtagattat ttcaaacagg ccgaaggcga tttctttgtc tgtacgccgg aggaaggcag
     8821 caaagcgttt ttacaccgtt tcgccgctgc gggcgcagca attcgttatc aggcggtgca
     8881 ttccgatgaa gtcgaagaca ttctggcgtt ggatatcgct ctgcagcgta acgacaccga
     8941 gtggtatgag catttaccgc cggagatcga cagccagctg gtgcacaagc tctattacgg
     9001 ccattttatg tgctatgtct tccatcagga ttacatagtg aaaaaaggcg tggatgtgca
     9061 tgcgttgaaa gaacagatgc tggaactgct acagcagcgt ggcgcgcaat accctgccga
     9121 gcataacgtc ggtcatttgt ataaagcacc ggagacgttg cagaagtttt atcgcgagaa
     9181 cgatccgacc aacagtatga atccggggat cggtaaaacc agtaagcgga aaaactggca
     9241 ggaagtggag taaaaattac ggatggcata gtatcgccat ccgtcattca cttaatcgtt
     9301 ctgtgccgtc tgccccgccg ccgccatttg ggcggctttt tgttttttat agctcaacgc
     9361 tgctgctgga acaggcatca ctttaccggt ttcaatccag gtacgcaggc ggctggcatc
     9421 ggcaaaatgg gtatatttgc caaacgcatc catcactacc agcgccaccg gtttattatt
     9481 gataaccgta cgcatcacca gacaatggcc cgccgcattg gtaaaaccgg ttttggttaa
     9541 ctgaatattc cagttatcgc gatacaccag atggttagta ttgcggaacg gcagcgtata
     9601 cgtcgggtta gagaaggttg ccatatcttc ccgggtagta cttaactgcc cgatcaacgg
     9661 atattgtttg ctggcaatga gcagtttggt taagtcacgg gcagttgaaa cgttatgcac
     9721 cgacaatccg gtaggttcaa caaagcgcgt gttgttcatt ccgagcgatt tcgctttcgc
     9781 attcattgcc ttaataaagg ctttgtaacc accgggataa tggtgtgcaa ggcttgccgc
     9841 cgcgcggttt tctgaagaca tcagcgccag caacagcata tctttacggc tgatttcgct
     9901 attcagtcgt acgcgcgaat agaccccttt catctccggc gtctggctga tatccacttt
     9961 tagtttttca tccagcggca gtcgtgcatc cagcacaacc atcgcggtca ttaatttgct
    10021 gatagacgca atcggacgca ccagatccgg gtggttcgag tagatcactt tgttggtatt
    10081 cagatcaaca atcatcgcgc taccggaggc aatttcaggt tgtgaagcgg tgatagcggc
    10141 tgccgttttc gcaacggcct gcggtgccaa aggcacagcc agcatcaggg ccaggctaaa
    10201 taaagaaact cgaaatttcg gcatgatgag cattcagata gtggttcacg cgcacaggtt
    10261 gcgcaccgcc ggagtaagga tttactgagg ctagcgacgc catcataacg agcaaaaagt
    10321 gcgatcgtca aaggagaatc gtgaggaaat gctgcattgc tgacatttac gccagcaatg
    10381 caacgtcaaa gaactttcta gaacaaacga taaccgtagc cccatagtat aacggttagg
    10441 gcgagcagca cttccagtac cagcacgcca atcgccagcg tcgaactaga gaagctaagg
    10501 ccttcctctt tgttgatatt caggaagctc ggaataccaa ggtaaagcag gtagccggtg
    10561 taaaacagcg ccaccgtgcc gaccagcgca cacaaccaga ccagtggata aagcgccacc
    10621 aaaccgctta aaaacagcgg agttgcaacg tagcccgcga agaccatgca gtgcgcaagt
    10681 gacggacgct gcggataatt acgcgccatc caccagatga cccgccccat taccgcaacc
    10741 ccagccagca taacgccata aaacaggaca gccagcgcca gtccggtaaa ccaggataac
    10801 ttcaggatag tgccatcgcc aaaattccag ccaatctgtg tagtgccaat gaaggcgcaa
    10861 atcaccggaa tcgccgccat cagcaaaacg tggtgggtgt aatggtgaga aatcgtttcg
    10921 ttttcgcgat taatcacctg catttcacga tcgggatggg aaaacagtcc ccagacatgg
    10981 ctcataccgc ccccttgttg tgagttcatg aacctgacag ttcaagtata agtcagcttg
    11041 tgattatttt ttgttcgctc atgtaatttg caccgtctga tgtacgtcct ttttcagcgt
    11101 gaatgatttc cagggtgtat gcttacaggc aaccaaaggg agacagactg gcctatggat
    11161 ctcaatacac tcatctcaca atatggttat gccgcgctgg tgatcggtag cctggcggaa
    11221 ggtgaaaccg tgactttgct gggaggcgtt gcggcacatc aggggctatt aaagttcccg
    11281 ctggtggtac tttctgtggc gcttggcggc atgattggcg accaggtgct ttatctgtgc
    11341 gggcggcggt ttggcggcaa gctgttacgc cgtttctcga aacatcagga taaaattgag
    11401 cgggcgcaga aacttatcca acgccatccg tatctgtttg tcattggtac gcgctttatg
    11461 tatggctttc gggtgattgg cccgacgctg attggtgcca gccagctgcc gccgaaaatc
    11521 tttctgccgc tgaatattct cggcgcattt gcctgggcgt tgatttttac cactattggt
    11581 tacgctggtg gtcaggtgat tgcgccgtgg ttgcacaatc tcgaccagca tttgaagcac
    11641 tgggtctggt tgattctggt cgtggttctg gtggtgggcg tgcgctggtg gctgaaacgg
    11701 cgcgggaaga aaaagccgga tcatcaggcg taaaaccatt gccctgggta aggcgttcgc
    11761 gccgcatccg acatccggtg caccatgcct gatgcgacgc ttgtgcgtct tatcatgcct
    11821 accaaaattt tacccattga aataaccacg cacctcactg cgctattctg ggttgaactg
    11881 cggattcgcc aacataaagc cgccatccac tatcaacgac tgcccggtgg tgtaatttgc
    11941 gccctctgag cacagccacg ctaccaggct ggcaatctca tgcgttgcgc caaaacgccg
    12001 cagaggaatc gaaggctccg cgtcgggctt cacgtcgctg tcatccatgc cattcattgg
    12061 cgtggcgatc gccccaggcg cgactgcgtt caccaaaatc ttatgcctga ccagctccag
    12121 cgccatcgct ttggttaacc caccgagcgc atgtttagcg gctgtgtagg cgctggcatc
    12181 cggcagcggc gtatgttcat gtaccgatgt aatgttgatg atgcgaccgc cctgcccttg
    12241 tttcaccatc tggcgggccg caatttgtga gcataaaaat gcaccatcga catcaacggt
    12301 aaaaatcttg cgccactcat cgaaagccat atcaagaaac ggcgctttgg tcattgcgcc
    12361 cgcattattc accagcacat caatacgccc cagccgttga atgagtttct ccagcgcctg
    12421 cgcaccttct ggcagtttac cgagatccag ctgcacgatc tccgcacgta cgccgtggct
    12481 aactacctca cgcgcggtat cttttgcccc ttcttcatct gagtgccagg taatgccaat
    12541 atcaaaccct tgctgcgcca gtaataacgc gcactctttg ccgatccccg aatcggaggc
    12601 ggtaataatc gcaacctgtg ccatcgagtt ctccacttaa cgctgaataa acgttaagta
    12661 tagaaggcgc atatcatcag cgtttgtaac ccccgcccaa cgcaccagtg agttgaatgg
    12721 aggcatccag ccactgccct tgcaataaca ggccattggc ccgctcacgc agcgcgggga
    12781 ttctggcttc gctgacgcgg gaaccagcaa tgatgcccgc gttaaagcgc gcctgcgcaa
    12841 gacctaccac acgcaaggta tcgcgctcaa tttgcgcctg atgctggttt ttctccgcaa
    12901 gtgtctgaac ctgactggct gcccgcgcca cgtcattcac cgcttcaacc accgctttgt
    12961 tgtagctggc gatagacaag ttgctttcgg cttttgcgat atcgagattg gcgttaagac
    13021 gaccactatc gaaaatgggt agcgtcaggc ctgccgtaac gcccatttgc tgcgcggaat
    13081 gacggaacag atcgcttaag tgcaacgcat cctgttgcag gaaggccatc aggttgatgt
    13141 caggataaaa tgccgctttt gccgcatcaa tggtgcttag cgatgactca acgtaccagt
    13201 gcgccgcctg caaatctgcc cgccgggcca gtaaggagta ccccagttca tcaggaagct
    13261 ggcttgccac tttcggcaac gcgaccggtt taagcttcaa tgactttgtc tggttatttg
    13321 taagtgcgct taaccgtgcc tcaataattt tcattttccc cgcgacatcg ttgagctgct
    13381 gccgggtttt gctggcatta atatcggttt ccacaccttc aactgaagaa gtaatcccgt
    13441 tctgatatag ctggcgatcg gtcgcgataa tggtgttctg ctctttttct atttgctgca
    13501 agaccgtgtt taacgccgcc tggg
//
LOCUS       DAJVUK010000115        13431 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.115, whole genome shotgun sequence.
ACCESSION   DAJVUK010000115 DAJVUK010000000
VERSION     DAJVUK010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13431
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.115"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..310
                     /locus_tag="OQQ57_003037"
     CDS             <1..310
                     /locus_tag="OQQ57_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HCS1957715.1"
                     /translation="VVLNGKINGNACIVVPLSTTRDHDKLNRGMHVEIASNVINGLQF
                     FDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAILLIN
                     "
     gene            509..790
                     /gene="ppiC"
                     /locus_tag="OQQ57_003038"
     CDS             509..790
                     /gene="ppiC"
                     /locus_tag="OQQ57_003038"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HCS1957716.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(877..2352)
                     /gene="ilvC"
                     /locus_tag="OQQ57_003039"
     CDS             complement(877..2352)
                     /gene="ilvC"
                     /locus_tag="OQQ57_003039"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HCS1957717.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRCHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            2502..3392
                     /gene="ilvY"
                     /locus_tag="OQQ57_003040"
     CDS             2502..3392
                     /gene="ilvY"
                     /locus_tag="OQQ57_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HCS1957718.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSSEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIEAFWKILPNH"
     gene            complement(3389..4933)
                     /gene="ilvA"
                     /locus_tag="OQQ57_003041"
     CDS             complement(3389..4933)
                     /gene="ilvA"
                     /locus_tag="OQQ57_003041"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HCS1957719.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRAVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(4936..6786)
                     /gene="ilvD"
                     /locus_tag="OQQ57_003042"
     CDS             complement(4936..6786)
                     /gene="ilvD"
                     /locus_tag="OQQ57_003042"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HCS1957720.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFS
                     QDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(6851..7780)
                     /gene="ilvE"
                     /locus_tag="OQQ57_003043"
     CDS             complement(6851..7780)
                     /gene="ilvE"
                     /locus_tag="OQQ57_003043"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HCS1957721.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(7800..8063)
                     /gene="ilvM"
                     /locus_tag="OQQ57_003044"
     CDS             complement(7800..8063)
                     /gene="ilvM"
                     /locus_tag="OQQ57_003044"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HCS1957722.1"
                     /translation="MMQYQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(8060..9706)
                     /locus_tag="OQQ57_003045"
     CDS             complement(8060..9706)
                     /locus_tag="OQQ57_003045"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HCS1957723.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLATTKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPELQQPLNINDWQQYC
                     AQLRDEHAWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(9709..9759)
                     /locus_tag="OQQ57_003046"
     CDS             complement(9709..9759)
                     /locus_tag="OQQ57_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957724.1"
                     /translation="MNNSTKFCFSTFSTGN"
     gene            complement(9846..9944)
                     /gene="ilvL"
                     /locus_tag="OQQ57_003047"
     CDS             complement(9846..9944)
                     /gene="ilvL"
                     /locus_tag="OQQ57_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HCS1957725.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            10296..11816
                     /locus_tag="OQQ57_003048"
                     /pseudo
     CDS             10296..11816
                     /locus_tag="OQQ57_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
     gene            complement(11841..12179)
                     /gene="maoP"
                     /locus_tag="OQQ57_003049"
     CDS             complement(11841..12179)
                     /gene="maoP"
                     /locus_tag="OQQ57_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HCS1957726.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            12298..13137
                     /gene="hdfR"
                     /locus_tag="OQQ57_003050"
     CDS             12298..13137
                     /gene="hdfR"
                     /locus_tag="OQQ57_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HCS1957727.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQSARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSLL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLD
                     EVY"
     gene            complement(13232..13307)
                     /locus_tag="OQQ57_003051"
     tRNA            complement(13232..13307)
                     /locus_tag="OQQ57_003051"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13272..13274),aa:Trp,seq:cca)
     gene            complement(13316..13392)
                     /locus_tag="OQQ57_003052"
     tRNA            complement(13316..13392)
                     /locus_tag="OQQ57_003052"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13356..13358),aa:Asp,seq:gtc)
BASE COUNT         3114 a         3638 c         3479 g         3200 t
ORIGIN      
        1 tgtcgtgctc aacggaaaaa ttaatggcaa cgcatgtatc gtcgttccat tatcaaccac
       61 tcgcgatcat gacaagttaa atcgtggaat gcatgttgaa atagccagta atgttatcaa
      121 tggcctgcaa ttctttgatc agcagattcg ttgggccaaa gccgacctgg tacaacaagt
      181 cagtcgaaac cgattaaata gagcaaggac ttacagaggg tatcttaatc aatgtttgcc
      241 acatgagttg gttgcagaca tacagagggc ggtcatcaag tcaatcaatg ccatattgct
      301 cataaattga caataaaata accatccccg ataatgactt tgtagcccat agaggcccta
      361 agttttctcc ccttgaggga cctgcgaagc ccggattttc cgggcttttg ccatatatgt
      421 accagcccct ccctgactga caattacgtt agcatctgcg gatcatgcta aaatcgccgc
      481 ctgacaatta ttcactcaag gcacgatcat ggcaaaaaca gcagcagcac tgcatatcct
      541 tgtaaaagaa gagaaactgg ctctggatct tctcgagcag attaagaacg gtgccgattt
      601 cggcaagctg gcgaagaaac actccatttg cccatcaggc aaacgcggcg gtgatttagg
      661 tgaattccgc cagggtcaga tggttccggc gttcgataaa gttgtgttct cttgtccggt
      721 actggagccg accggcccgc tgcacaccca gttcggttac cacatcatta aggtgctgta
      781 ccgtaactaa tagcaaggcc ttctccagga gaaggccttg agtgttttct ccctctccct
      841 gtgggagagg gtcggggtga gggcatcagc gcgcacttaa cccgcaactg caatacgttt
      901 catatccgtc atatagccgc gcagtttctt acctacctgc tcaatcgcat ggcagcgaat
      961 cgcttcgttc acatcacgca gttgcgcgtt atctaccgca ccttccggaa tagctttacc
     1021 cagatcgccc ggttgcagct ctgccataaa cggtttcagc aacggcacac aagcgtaaga
     1081 gaacagatag ttaccgtact cagcggtatc agagataacc acgttcattt cgtacagacg
     1141 cttacgggcg atggtgttgg caatcagcgg cagctcgtgc agtgattcat aatatgcaga
     1201 ctcttcaatg atgccggaat cgaccatggt ttcaaacgcc agctcaacgc ccgctttcac
     1261 catcgcgatc atcagtacgc ctttatcgaa gtactcctgc tcgccgattt tgccttcata
     1321 ctgcggcgcg gtttcgaagg cggttttgcc ggtctcttca cgccaggtca gcagtttctt
     1381 atcatcgttg gcccagtccg ccatcatacc ggaggagaat tcgccggaga tgatgtcgtc
     1441 catatgtttc tggaacaggg gtgccatgat ctctttcagc tgttcagaca gcgcgtaagc
     1501 acgcagtttc gccgggttag agagacggtc catcatcagg gtgatgccgc cctgcttcag
     1561 cgcttcggtg atggtttccc aaccgaactg aattagtttt tctgcgtatg ccggatcggt
     1621 gccctcttcc accagcttgt cgaagcacag cagcgagcca gcctgcaaca taccgcacag
     1681 gatggtttgc tcacccatca ggtcagattt cacttccgca acgaaggacg attccagcac
     1741 gcccgcacgg tgaccaccgg ttgctgccgc ccatgcttta gcgatcgcca tgccttcgcc
     1801 tttcggatcg ttttccgggt gaacggcaat cagcgtcggt acgccgaatc cacgtttgta
     1861 ctcttcacgc acttcggtgc cagggcattt cggcgcaacc atgactacgg tgatgtcttt
     1921 acggatctgc tcgcccactt cgacgatgtt gaaaccgtgc gagtaaccca gcgccgcgcc
     1981 gtctttcatc agtggctgta cggtgcgcac tacgtcggag tgctgcttgt ctggcgtcag
     2041 gttaaccacc aaatccgcct gcgggatcag ttcttcgtaa gtgcccactt taaaaccgtt
     2101 ttcggtcgct ttacgccagg atgcgcgctt ctcggcaatc gcttctttac gcagagcgta
     2161 ggagatatcg agaccagaat cacgcatgtt caggccctgg ttcagcccct gtgcgccaca
     2221 gccgacgata accacttttt taccctgaag gtagctcgcg ccgtcggcga attcgtcgcg
     2281 ccccataaag cgacatttgc ccagctgtgc cagctgctgg cgcaggttca gtgtattgaa
     2341 gtagttagcc atggtgattc ctcgtgatgt tgtgcttctt attgttcggt tcgcgtttgc
     2401 gagattgaat tcactatatg acaggaaatt tattgcggaa attgatatat tcacaacgtc
     2461 acattgcaat ttctgcaacg tcaacattga gggctgctcc attggattta cgcgatctga
     2521 aaaccttcct gcatctggcg gaaagccgcc attttggccg cagcgcgcgg gcgatgcacg
     2581 ttagcccatc cacgctctca cggcagattc agcgcctgga agaagatctt ggtcagccgc
     2641 tatttgtgcg cgataaccgc acggtgacgc tgactgaagc gggcgaagag ctgcgcgttt
     2701 tcgcccagca aacgctgttg cagtatcagc agttgcgcca caccatcgat cagcaagggc
     2761 cgtcgctctc tggcgaatta catatcttct gctcggtgac cgctgcctac agccatctgc
     2821 caccgattct cgaccgcttc cgcgcggaac acccgtcggt ggagatcaaa ctaaccactg
     2881 gtgatgcggc agatgcgatg gaaaaggtag tcactggcga agcggatctg gcgattgccg
     2941 ggaaaccgga gactctgccc ggcgcagtgg cgttttcgat gctggagaat ctggcagtag
     3001 tgctgattgc gcccgcgctg ccctgcccgg tgcgtaacca ggtttcgtca gagaagccgg
     3061 actggtctac agtgccgttt atcatggccg atcagggacc ggtacgccgc cgcattgaac
     3121 tgtggtttcg acgcaataaa atcagcaacc cgatgattta cgccacggtt ggcgggcatg
     3181 aagcgatggt atcgatggtg gcgctcggct gtggcgtggc gctgttgccg gaagtagtgc
     3241 tggaaaacag ccccgaaccg gtgcgtaacc gcgtgatgat tttagagcgc agcgatgaaa
     3301 aaacgccgtt tgaactgggc gtttgtgcgc agaaaaagcg gctgcatgag ccgctgattg
     3361 aggcgttctg gaagattttg ccgaaccatt aacccgccaa aaagaacctg aacgccggat
     3421 tattggtttc gtcgtggcaa tcgtagccca gctcatttag ccgggtttcg aaatccggtt
     3481 catggtcgcc gagttcgaac gccgccagta cgcgcccgta gtcggtgcca tggctgcgat
     3541 agtggaacaa agaaatgttc cagtgcgtac ccagcgtgtt gaggaagcgc agcagcgcgc
     3601 ccggtgattc cgggaattcg aagctgtaga ggcgttcctg caacggatgt gacggacgcc
     3661 cgccgaccat atagcgcaca tgcaacttcg ccatttcgtc gtcggagaga tccaccacgc
     3721 tgtagccgcc gtcgttgagc atctgcaaaa tttctttgcg ctcttcgagg ccgcggctca
     3781 ggcgcacgcc gacaaagatg caggcgtttt tggcatcggc aaaacggtag ttgaactcgg
     3841 tgaccgctcg cccgccaagc agttggcaga atttgaggaa gctgcctttt tcttccggaa
     3901 tggtcaccgc caacaacgct tcacgctgtt cgcccagttc gcagcgttcc gagacgtagc
     3961 gcaggccgtg gaagttcacg ttggcaccgg aaagaatatg cgccagccgt tcgccgcgaa
     4021 tgttgtgctg ggcgatatat tttttcattc ccgccagcgc cagcgcgcca gagggttccg
     4081 ccaccgcgcg cacatcttcg aataaatcct tcatcgccgc acagatcgca tcactatcga
     4141 cggtgatgat gtcgtcgaga tactcctggc ataaacggaa ggtttcgtca ccgatgcgtt
     4201 ttaccgctac gccttcagca aatagcccta cgcgcggcag atcaaccgga tgacccgcat
     4261 ccagcgctgc tttcaggcag gcggagtctt ccgcttctac ggcgatcact ttgatttgtg
     4321 gcatcagttg tttgatcagc accgcaacgc ccgccgccag accgccgccg ccgactggca
     4381 caaatacgcg gtcgagatgg gcgtcctgct ggagcagttc cagcgccagc gtgccttgcc
     4441 cggcaatcac catcggatgg tcgaacggcg gcacccaggt gaacccctgc tgctgtgaca
     4501 gttcgatcgc tttagctttc gcttcgtcaa agttcgcgcc atgaagcagc acttcgccgc
     4561 cgaatccacg taccgcatcg actttgatgt cggcggtggc ggttggcata acgatcaggg
     4621 ccttcacgcc taaccgcgca gaagaaaacg cgacgccctg cgcgtggtta cccgcagaag
     4681 cagtgatcac gccgtgcgct ttttgttctt ccgtcaggcc cgccatcatg gcgtatgcgc
     4741 cgcgcagctt aaagctgtgc actggctggc gatcttcgcg cttcaccaga atgacgttat
     4801 caagacgcga cgacagtttt tccatttttt gtagcggcgt aacctgcgct gcctcgtaaa
     4861 ccggcgcgcg cagcactgct cttaaatatt cggcaccttc cggagcacca gacaggggtt
     4921 gcgagtcagc cattattaac cccccagttt cgatttatcg cgcaccgcac ctttgtcggc
     4981 gctggttgcc aggctggcgt aggcgcgcag ggcaaaggaa acctgacgtt cacggttttt
     5041 cggcgtccag gctttgtcac cccgagcttc ctgcgcttca cgacgcgccg ccagttcggc
     5101 atcgcttacc tgtaactgaa tgccacggtt cgggatgtcg atagcgatca ggtcaccatc
     5161 ttcaatcaga ccaatgctgc cgccgcttgc cgcttccggt gagacgtggc cgatggaaag
     5221 accagaggtg ccgccagaga aacgaccgtc ggtgatcagc gcacaggctt taccgagacc
     5281 cattgatttc aggaagctgg ttgggtagag catttcctgc atgccagggc cgcctttcgg
     5341 gccttcatag cggatcacca ccacatcgcc cgcgacaact ttgccaccga ggatcgcttc
     5401 taccgcgtcg tcctggcttt cgtacacttt tgccgggccg gtgaatttga ggatgctgtc
     5461 atcgacgccc gcggttttca cgatgcagcc gttttcagca aaattaccgt agagcaccgc
     5521 caggccgccg tctttgctgt aggcgtgttc cagcgagcgg atacagccgt ttgcgcgatc
     5581 gtcgtccagc gtatcccaac ggcaatcttg cgagaatgcc tgggtggtac ggatacccgc
     5641 agggccggcg cggaacatat tttttaccgc gtcatcctgg gtcagcataa cgtcgtattg
     5701 ctccagcgtt tgcggcaacg tcaggccgag cacgtttttc acatcacggt tcagtaaccc
     5761 cgcgcgatcc agttcgccga gaataccgat aacaccacca gcacggtgaa catcttccat
     5821 atggtatttc tgggtgctcg gcgcaacttt acacagctgt ggaaccttgc gggaaagctt
     5881 atcgatatca ctcatggtga agtcgatttc cgcttcctgc gccgccgcca gcaggtgaag
     5941 tacggtgtta gtcgatccac ccatcgcgat atccagcgtc atggcgtttt caaacgccgc
     6001 cttactggcg atattacgcg gcagtgcact ttcgtcgttt tgctcgtaat aacgtttggt
     6061 caattcaaca atgcgtttac cagcattaag gaacagctgc ttacggtccg cgtgggttgc
     6121 cagcagcgag ccgttgcctg gctgcgacaa acccagcgct tcggtcaggc agttcattga
     6181 gttagcggta aacatcccgg agcaggaacc gcaggttggg caggcggaac gttcaacctg
     6241 atcgctctgg gagtcagaaa ctttcgggtc tgcgccctgg atcatcgcat caaccagatc
     6301 gagtttgatt atctgatcgg acagtttggt tttcccggcc tccatcgggc cgccggaaac
     6361 aaagatcacc ggaatattca ggcgcaggga agccatcagc atccccgggg tgattttgtc
     6421 gcagttagag atgcagacca tggcgtcggc gcagtgggcg ttgaccatat actcaacgga
     6481 atcagcgatc agttcgcgag atggaagtga ataaagcatc cccccgtggc ccatggcaat
     6541 cccatcatcc accgcaatgg tgttgaactc tttggcaacg ccgccagccg cttcaatttg
     6601 ttcggcgacc agtttaccga gatcgcgcag atggacgtga cccggtacaa attgggtgaa
     6661 cgagttcaca accgcgataa tcggcttgcc aaaatcggcg tcggtcattc cggtggcgcg
     6721 ccacagcgca cgagcacccg ccatattacg accatgagtg gtggtggcgg aacggtactt
     6781 aggcatactt tatttactcc cagtgtctgt ctcgtaaatg ggacggtgcg tgccgtccca
     6841 ttttttgtat ttattgatta acttgatcta accagcccca tttatcttcg gtttcgccag
     6901 tgaagaggcc gaagaaggct tgctgaatgc gtttggtaac cgggccacaa cggccttcgc
     6961 caacctgaat accgtctacg ctgcgcactg gcgtgatttc tgccgcagta ccggacataa
     7021 acacttcatc cgccaggtac agggattcgc gcgacagcac ctgctcacgc acttcaattc
     7081 ccagctcttt cgccagtttg atgatggcat cacgggtaat acccggcagc gcggatgagg
     7141 taaacggtgg ggtgaacagc acgccgtctt tcacttcaaa caggttttca cctgcgcctt
     7201 cagagatgta accgttcaca tccagcgcga taccttcctg ataaccgtgg cggcgcgctt
     7261 cgctacccac cagcagggaa gagaggtagt taccaccggc ttttgccgcc gtcgggatgg
     7321 tgtttggtgc tgcgcggttc caggaggaaa ccatcgcatc gatcccctgc tccagcgctt
     7381 ctgcgcccag atacgctccc cacgggaaag cagcgataat cacgtcggtt gagtatcccg
     7441 ctggcgggtt tactcccatg ccaacatcac cgacgaagat cagcggacgg atataggcgc
     7501 tggtgagatt atttttgcgg atcacgtcac gacaagcttc catcagctca tcaatgctct
     7561 gcgaaaccgg gaagcgatag attttggcgg agtcatgcag acgctgcata tgctcacgat
     7621 ggcggaatac aaccggtcct ttgtgcgagt cgtagcaacg gatgccttca aaaaccgaag
     7681 tgccatagtg cagcgcgtgc gacatcacat gcaccttcgc gtcttcccag cgaaccatct
     7741 ccccattgaa ccaaatgtaa tcagctttct tcgtggtcat ttttatattc cttttgcgct
     7801 caggcgcgga tttgttgtga tgtggttgtg ctctggcaga tggcaacgtg tgcgacgtcc
     7861 accagtttat ttaactgact aaacagtaag tcgaccgacc gtgggctggc aacggtcaat
     7921 tcgatattta tattttgtgc atcgctggcg gcggccatat tcattgagca gacgtggaaa
     7981 ccacgatgac gcaccacgcg taaaacacgt tctaaggttt ccggattgaa gcgagccgat
     8041 acattgacct gatattgcat catgataatt tctccaacat ttctgaatta ctggcgccag
     8101 gcggcaccag cggccagacg ttctcaagtt cgtcgattga gacatgaagc aggtatggcc
     8161 catcactgtt cagcatggtg tcgagtgccg cttcaacctg gtctttacgg gtgatgtgtt
     8221 ggccagggat gccgaaggcg ctggctaaca tgaggaaatc ggggttatca gtaagggtgg
     8281 tttcgctgta tcgttcctga aaaaacagtt gctgccattg tcgaaccatc cctaaccgtt
     8341 ggttatcgag taagacgatt ttcaacggta actgcttgcg ttttacggtg cccagctctt
     8401 gcacattcat catgaaagag ccgtcaccgg agatacagac gacggtatcg ttcggtcgcg
     8461 cgacttgtgc gccaaccgcc gctggtaaac caaaacccat agtgcctaag ccgctggagg
     8521 tgatgaaatt ttccgggcga gtgtgggcga tgtgttgcgc agcccacatc tggtgctgcc
     8581 ccacatctgt ggtcacgacg caatccgcag gtttacgatc cgacagttgt tttaacaaca
     8641 acggcgcgta gatagcgtcg ccgggatggt cgtaacgcca ggcatgttca tcacgcagct
     8701 gcgcgcagta ttgctgccag tcattgatat ttaacggctg ctgtaattct ggtaacagag
     8761 catttaaatc accttgtaat gccacatgtg cctgacgcag cttgttcatt tctgccgggt
     8821 cgatatccat atggataacg ctggcgtgtg gtgcgaaggt gttcagtttg ccggtcaccc
     8881 ggtcatcaaa acgtgcaccc acggcgatca gcaagtcgca ctcctgcacc gcgaagttcg
     8941 ccgctttggt gccatgcatt cccagcatgc ccagatagta cggataatct gcttcaactg
     9001 cgcccagccc tttcagcgtg caggtggcag gcatttttgt ggtagcgaga aattctcgta
     9061 aagcaggaac tgcctgcgcc atacccacgc caccaccaac gtacagcatc ggtttttgcg
     9121 cttttgccag catctggcgc gcttgctcaa cttcggcatg tgggaaagtc acttcgtttt
     9181 caacggtggt gaaccacggt tccaggtcac cgctggctag ctggatatct tttgggatat
     9241 cgaccagaac cggaccagga cgacctgagc tggcaacgtc gaatgcttca gccataatgc
     9301 gcggcaactc ttccagcgac tgcaccagaa agctgtgctt ggtacaggct aacgacaatc
     9361 ccaggacatc cacttcctga aatgcatcag tgccgataaa cggtgcggac acttgaccgg
     9421 tgatggcaac aacagggata gaatctaaca gtgcgtccgc aagcccggtt atcaggttgg
     9481 ttgcgcccgg accagacgtg gcgatacata cgccagtttt gccggtagca cgggcataac
     9541 cgatagccgc cattgccgca ccctgctcat gtcggcacag caagtgctcc acgccgccgt
     9601 catacaatgc atcgtaaacc ggcataattg cgccacccgg ataaccgaaa acggtgttca
     9661 caccctgtgc ccgcaacgca tgtaccaccc actgtgcgcc attcatagtt agttccccgt
     9721 gctgaatgtt gagaaacaga attttgtgct gttattcatt gtctgctcct cggttatgtt
     9781 tttaaggtca aaaaaaaccc ccggaccttt cggtgcgggg gtcttagttc gttaaggctt
     9841 gatttctaag cctttcctcg tccaagtgca gccccgcacg gtgggataat aatcaccacc
     9901 acgctaatca cgaccaggct aatcactcgt agaagggctg tcattttgtc ttttcttgca
     9961 tcttgttcga aggaatgcct aaagagttac cataggtttt gtaaatagta caagatattt
    10021 tttggccgat ttttatgatg cgtttaataa tttcaatata agttgttgtt ttttaaaaat
    10081 aaaatagtga gtaaaaaaat tcaatttcag tatgaatgtt gttcccttcc tcgtagttca
    10141 tcctttgtcc gctgcatttt tgcgagcatc attccaccgc cagaacaact caacttcact
    10201 tgcacaaata aacaggaatc agccactaaa attcacgaat tagcgggcta cagcagcgat
    10261 atcttatgca cataatggtg actcaaggag ggcttatgtc actgtcaatt gttcataccc
    10321 gcgcagccct gggagtaaat gcgcccccga tcactgttga ggtacatatc agtaaaggtc
    10381 tacccggctt aacgaaggtg ggcttaccag aaacaacggt aaaagaagct cgcgatcgcg
    10441 tgcgcagcgc cattatcaat agcggatatg aatatccggc gaaaaaaatc accatcaacc
    10501 tggctccagc tgatctgcca aaagaagggg gacgatatga tttacctatc gccattgcgt
    10561 tgctggcggc ctcagaacag cttacagcca ataagttaga tgaatatgga ttagtcggag
    10621 aactggcgct tacaggcgct ctgcgtggcg ttcccggcgc aatctccagt acaactgaag
    10681 ctattaagtc gggcagaaaa attatcgtcg cgaaagataa cgaagatgaa gtggggctaa
    10741 ttaacggtga aggatgcctg atagccgatc atctgcaagc tgtctgtgcg tttctggaag
    10801 gtaagcacgc tctcgaacgc ccgaaaccaa ctgatgcagt atcccgggcg ctacaacatg
    10861 atctcagtga tgttatcggt caggaacaag gaaagcgagg actggaaatt accgccgctg
    10921 gcgggcacaa ccttttactg attgggccgc cgggaacagg taaaacaatg ctcgccagcc
    10981 gtattaatgg cctgttgcca gatttaagca atgaagaggc actggagagt gctgcgatat
    11041 taagtctggt aaatgctgaa tcagtacaaa aacaatggcg gcagcgcccg ttccgctcac
    11101 ctcatcacag tgcatcgtta actgcgatgg taggcggtgg cgcaattcca gggcccggtg
    11161 aaatttcgct ggcgcataac ggcgtgcttt ttcttgatga gttacctgaa tttgaaaggc
    11221 gtacactgga tgccttgcga gagccgattg aatccgggca gatccatctt tcacgcacgc
    11281 gagcaaaaat aacctatcca gcccgtttcc agcttgtcgc ggcgatgaat cccagcccta
    11341 ccggacatta tcagggaaac cataaccgct gcacaccaga gcaaacgctg cgttatctca
    11401 accgactctc tggtcccttt ctcgaccgct tcgatctctc actggagatc ccattaccgc
    11461 ctcccggtat tttgagtaaa acggtagtgc cgggagaaag cagcgccacc gttaaacaac
    11521 gcgtaatggc cgccagagag cgccaattta agcggcagaa taaactgaac gcctggctgg
    11581 atagtccgga aatacgccaa ttctgcaaac ttgagagcga agatgcgatg tggctggaag
    11641 aaacgctgat ccatctgggg ttatcgattc gtgcctagca gcggttattg aaagttgcac
    11701 gaaccattgc tgatattgat cagtctgaca ttatcacacg tcaacatttg caggaggcag
    11761 ttagctatcg agcgattgac cgtttgctca tccatctgca gaaactactg acataaaaaa
    11821 agggcatttc gcccttttta ttaatcgtca gaatcggtgt agtcttcagc accttcaacc
    11881 tgcggtttac cgccggaaag ggtgtgaaaa cgttttggac gcttaatacg cgtcatatac
    11941 ttggaccaca cgcgttctgc ttctgtcact ggctcacgtt cgccacggca tactgctacg
    12001 aagagtttct cttcctcggt aaccggctcg cgtttgccaa gatccaactc attgaaggca
    12061 taaccatgac gctcaagcag ttgtgcctct ttgatggtga aatcaccatg acgagagaat
    12121 ccacgtggat aatgtttatt gtcgaaatat cgattagtcg tcgtaaagct ttccgccatc
    12181 ctgcacgctc ctaattcttt gaccgagcta gttatggcgc ggagtattag ttacgcttga
    12241 cagagtgtaa aacaaaacat ttaaatcata acgacaaata attttgcgga gagcactgtg
    12301 gatacggaat tgttaaaaac tttcctggaa gttagccgaa cgcgtcactt tggtcgagcg
    12361 gctgaatcgc tctatctgac ccagtcagca gtgagctttc gaatcagaca actggaaaat
    12421 caactgggtg tgaacctttt cacccgccac agaaacaata tccgtttaac cgctgccggt
    12481 gaaaaactac tgccttatgc agaaacgctc atgagcacct ggcagtccgc ccgcaaggag
    12541 gtggcgcata cctcacgaca taacgagttt tctatcggtg ccagcgcctc attgtgggaa
    12601 tgtatgctta atcagtggct gggacgtttg tatcaaaatc aggatgccca tacaggctta
    12661 cagttcgaag cgcgaattgc ccaacggcag tctctggtaa aacagctgca tgaacgccag
    12721 cttgatcttc ttattaccac tgaagcgccc aaaatggacg aatttagtag tctgttgctg
    12781 ggatatttca ctttagcgct ttataccagt gccccttcaa aactaaaggg agatcttaat
    12841 tatctgcgac ttgagtgggg gccagatttt caacagcatg aggcaggttt gatcggtgct
    12901 gacgaagtgc ccattctgac aaccagttct gctgaactgg cacagcaaca gattgcgatg
    12961 cttaatggtt gcacctggct acccgtcagc tgggcgcgta aaaaaggcgg cctgcatacc
    13021 gttgtcgata gcacaacact ttcacggccg ctttatgcca tatggctgca aaatagcgat
    13081 aaaaatgcgt tgattcgcga tcttttgaaa attaacgtgc tggatgaagt gtattaatat
    13141 gaatggctgg caaggatgcc ggtagaagga tttacttcgg agagggttat ttcagataaa
    13201 aaaatcctta gctttcgcta aggatgattt ctggcagggg cggagagact cgaactccca
    13261 acacccggtt ttggagaccg gtgctctacc aattgaacta cgcccctaat tagggtggcg
    13321 gaacggacgg gactcgaacc cgcgaccccc tgcgtgacag gcaggtattc taaccgactg
    13381 aactaccgct ccaccgaatt cttttacaac caccggtttt atgaccggct t
//
LOCUS       DAJVUK010000116        13367 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.116, whole genome shotgun sequence.
ACCESSION   DAJVUK010000116 DAJVUK010000000
VERSION     DAJVUK010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13367
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.116"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(171..1094)
                     /gene="dmlR"
                     /locus_tag="OQQ57_003053"
     CDS             complement(171..1094)
                     /gene="dmlR"
                     /locus_tag="OQQ57_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DmlR"
                     /protein_id="HCS1957728.1"
                     /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE
                     QTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS
                     FGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK
                     LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKV
                     TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS
                     RLATSAKVRITVEFLRQYFAEHYPNFSLEHA"
     gene            1197..2282
                     /gene="dmlA"
                     /locus_tag="OQQ57_003054"
     CDS             1197..2282
                     /gene="dmlA"
                     /locus_tag="OQQ57_003054"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HCS1957729.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFDLSFEQMG
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YINLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTYATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            2532..4142
                     /gene="yeaV"
                     /locus_tag="OQQ57_003055"
     CDS             2532..4142
                     /gene="yeaV"
                     /locus_tag="OQQ57_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
                     /protein_id="HCS1957730.1"
                     /translation="MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTF
                     VTRTLGSAVQVLVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSST
                     LYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFH
                     VRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSA
                     LTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPT
                     EFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTR
                     VSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQ
                     QVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWC
                     VVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQV
                     EHYLPQTPVEALEKTPVIPAGTVFKGDN"
     gene            4174..5298
                     /gene="yeaW"
                     /locus_tag="OQQ57_003056"
     CDS             4174..5298
                     /gene="yeaW"
                     /locus_tag="OQQ57_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HCS1957731.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
                     ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTSANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            5354..6319
                     /gene="yeaX"
                     /locus_tag="OQQ57_003057"
     CDS             5354..6319
                     /gene="yeaX"
                     /locus_tag="OQQ57_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HCS1957732.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGNRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIAAD
                     TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="OQQ57_003058"
     CDS             complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="OQQ57_003058"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310540.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HCS1957733.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     SAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLTLVE
                     KAQTLPEEALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="OQQ57_003059"
     CDS             complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="OQQ57_003059"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HCS1957734.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGVGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAVVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="OQQ57_003060"
     CDS             complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="OQQ57_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HCS1957735.1"
                     /translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGRSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
     gene            complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="OQQ57_003061"
     CDS             complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="OQQ57_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HCS1957736.1"
                     /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWRGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPATEDMLPIACQIFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(10833..12743)
                     /locus_tag="OQQ57_003062"
     CDS             complement(10833..12743)
                     /locus_tag="OQQ57_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HCS1957737.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            12875..13219
                     /locus_tag="OQQ57_003063"
     CDS             12875..13219
                     /locus_tag="OQQ57_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCS1957738.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
BASE COUNT         3198 a         3555 c         3335 g         3279 t
ORIGIN      
        1 accagatagg tccagtaatt cagaaccccg tattcagcga acacattaac ctctttaatt
       61 atctttcgat catgcgcgat taaaggtgaa tatgctaacc aatctgtagc ggcttagaaa
      121 ggagaaaatc aggttttaac ccgatatcaa cccgataatt gaatcattaa tcaggcatgc
      181 tccagtgaaa aattcgggta gtgctcggca aaatactggc gtaaaaattc taccgttatc
      241 cgcactttcg ctgacgtcgc cagccttgaa acataaacgg cccagacgtt cgctggctgg
      301 taatattccg gtagcacttg cactaaatga ccactggcaa tgttttcgct aacatcccac
      361 caggaacgca gagcaatccc ctgcccatcg agacaccact gatggacaat ttctccatga
      421 ttagacgaca gtgggccggt gactttaatc gcatggtggc cttctttatt gcgtaattgc
      481 cagacaccaa aaggatgatc gcgctcttta atgaccaggc acggcaatgc agaaagatcg
      541 gttaaatgtt tcggcgcgcc atgttgcgca ataaattccg gcgacgcgca gagaatgcgg
      601 taattggtcg ccagtttgcg ggcgattaaa ttaggggcga tgtcatcgcc aatgcgaata
      661 tcgagatcga caccttcatt gaccaaatcg accagccggt cttccacatc aaaacgtaat
      721 tccagttgcg gatacgcctt cgccagcgct gataacgccg gagccaccac ctgtcgtcca
      781 aaaccaaagc tgctgataat acgcagcatc ccctgtggca cctgacgcac gtcagaaagt
      841 tcgtccatca tctgaccgac atcctgcaaa atccgctgcg cccattcata aatccgctct
      901 ccttcttcgg taatggtgac gcggcgggtg gtgcggtgta acaacaccac gtttagcgtt
      961 tgctccagca aggcgatgcg cttgctgacg aacgccggtg aaacgcccag ttcttccgcc
     1021 acggcggcaa aaccagcccg acgagccacc agcataaaga cgcgcaaatc attcagcagc
     1081 ggtaaattat tcatgattcg tgttttatgt ttcaccagtt acggggatta attccttttc
     1141 cgtcaattat aggatggtga tgttgtcaat tttgatggtc aggaagtgag aacccaatga
     1201 tgaaaacgat gcgtattgct gcgatcccgg gagacgggat tggtaaagaa gtccttcctg
     1261 aagggattcg cgtgttacag gctgccgctg agcgctgggg cttcgacttg agttttgagc
     1321 aaatggggtg ggcgagctgc gagtattaca gccatcacgg taaaatgatg ccggacgact
     1381 ggcatgagca acttagccgt ttcgacgcca tctattttgg tgccgtcggc tggccggata
     1441 ccgttccgga ccatatttcg ttgtggggtt cgctgctgaa atttcgtcgt gaattcgacc
     1501 agtacatcaa cctgcgcccg gttcgtctct ttcctggcgt tccctgcccg ctggcgggaa
     1561 aacagcctgg cgacatcgat ttttacgtgg tcagggaaaa caccgaaggc gaatattcct
     1621 cgctcggcgg tagagtgaat gaaggtacag agcatgaagt cgtcattcag gaatcggtat
     1681 ttacacgtcg tggtgtcgat cgcattttgc gttatgcctt cgaacttgcg caaagccgcc
     1741 cacgtaagac gctaacttat gccactaaat cgaacggttt agccatcagc atgccgtact
     1801 gggatgagcg agtggaagca atggccgaga attacccgga gatccgctgg gacaagcagc
     1861 atattgatat tctctgcgcg cgttttgtga tgcagccgga acgcttcgat gtggtggtgg
     1921 cgtccaattt gtttggcgat atcctttccg atcttggccc ggcctgcacc ggcaccattg
     1981 gcattgcccc atccgccaac ctgaatccgg aacgcacttt cccgtcgctc ttcgagcctg
     2041 tccacggttc cgcgccggat atctacggga aaaatattgc taaccctatc gccacgattt
     2101 gggccggggc aatgatgctc gattttctcg gcaatggcga tgagcgtttc cagcaagcgc
     2161 ataacggtat tctggcagca attgaagaag tgattgctca cgggccgaaa acacctgata
     2221 tgaaaggcaa tgccaccacg ccacaggttg ccgacgcgat ttgcaaaatt attttgcgtt
     2281 aaggtcaaac cagtttattt gaaccgcgtc actgacgcgg ttttttattc gttctttgca
     2341 gtaaataacc tgcgtcattt caccttttat tgtttccgtt tcgtgtttta tggctttccg
     2401 cattcttaat tgtttaattt atgtaatatt caaataatca atttgttaaa cacaacatac
     2461 aactcattac cctgcaaata attacaactg gcaaaagcca gagacgggct tttatgccca
     2521 ggagatgact catgatgagc aatgttaaga aaaaagatgt gccgctgata agcatcagcc
     2581 tggtggccat tcttttcatc gcagctgcat taagcctttt cccacaacaa tcggccgacg
     2641 cggccaacgc aatatacact tttgttacgc gtacgttagg ttccgccgta caggtattgg
     2701 ttttgctggc aatgggactg gtgatttatt tagccaccag taaatacggc aatattcgtc
     2761 ttggcgaagg aaaaccggaa tacagcacgc tctcctggct gtttatgttt atttgtgccg
     2821 gtttaggttc ttctacgctt tattgggggg ttgctgaatg ggcctattat tatcaaacac
     2881 ctggattaaa tatcgcaccg cgttcacaac aggcactcga atttagcgtt ccctactctt
     2941 tcttccactg gggcatcagc gcctgggcaa cttatacgct ggcctcatta atcatggctt
     3001 atcactttca tgtgcggaaa aacaaaggtc tgagcctttc cggcattatt gctgctatta
     3061 ccggcgttcg cccgcaaggc ccatggggaa aactggttga tttgatgttc ctgatcgcca
     3121 ctgtcggcgc actgactatt tcccttgttg tcaccgcagc aacctttact cgtggacttt
     3181 ccgcactgac aggtttaccc gacaacttca ccgtgcaggc atttgtgatc ctgctttctg
     3241 gcggcatttt ttgcctaagc tcgtggattg gtatcaacaa cggtttgcaa cgtctgagca
     3301 aaatggttgg ctggggcgcg ttcctgctgc cattactggt gctgattgtc ggcccaaccg
     3361 aatttattac caacagcatc atcaatgcca tcggcctgac cacgcaaaac ttcctgcaaa
     3421 tgagcttatt caccgatccg cttggcgatg gttcatttac ccgcaactgg accgttttct
     3481 actggctgtg gtggatctca tacacccctg gcgtagcaat gtttgtcacc cgcgtttccc
     3541 gcggtcgtaa gattaaagaa gttatctggg gactgatcct cggcagcacc gtcggttgct
     3601 ggttcttctt cggcgtaatg gaaagctatg ccattcatca gtttatcaat ggcgtaatca
     3661 acgtcccaca ggtgctggaa acactgggcg gcgaaacagc tgtacagcaa gttctgatgt
     3721 cgttgccagc cggtaaattg ttcctcgccg catacctggg cgtgatgatt attttccttg
     3781 cctcgcatat ggatgcagtg gcctacacca tggcggcgac cagtacgcgt aatctccagg
     3841 aaggtgacga tcctgaccgt gggctgcgtc ttttctggtg cgtggtgatc actctgatcc
     3901 cgctttccat cttgtttacc ggtgcttcgc tggaaacgat gaaaaccacc gtcgtgctca
     3961 cagcccttcc cttcctcgtc attttactgg tgaaagtcgg cggatttatt cgctggctga
     4021 aacaggatta cgccgacatt ccggctcatc aagttgaaca ttatctcccg cagacaccgg
     4081 ttgaagccct ggaaaaaaca ccagtgatcc ctgcgggaac cgtattcaaa ggcgacaact
     4141 gagcgccatc atcctaacga taaaggtatc cctatgagca atctgagccc tgactttgta
     4201 ctacccgaaa atttttgcgc taacccgcaa gaggcgtgga ccattcctgc ccgtttttat
     4261 accgatcaga acgcgtttga acacgaaaaa gagaacgtct tcgccaaaag ctggatttgc
     4321 gtcgctcaca gcagcgaact ggcgaatgcc aatgattatg tgacgcgtga gatcattggc
     4381 gaaagcatcg tgctggtacg cggtcgtgat aaggttttgc gcgcgttcta taacgtgtgt
     4441 ccgcaccgtg gtcatcagtt gttgagcggt gaaggaaaag caaaaaatgt gattacctgc
     4501 ccgtatcacg catgggcatt caaactcgat ggcaatctgg cccatgcacg taactgcgaa
     4561 aacgtcgcca atttcgatag cgacaaagcg caactggttc cggtgcgtct ggaagaatat
     4621 gccggattcg tcttcatcaa catggacccc aacgccacca gcgtagaaga tcagttaccc
     4681 ggtctgggcg cgaaagtgct ggaagcctgc ccggaagtcc acgatctgaa actggcggcc
     4741 cgctttacca cccgcacgtc tgccaactgg aagaacattg tcgataacta tctcgagtgc
     4801 tatcactgtg gtccggcgca tccaggtttc tccgactccg tacaggttga tcgttactgg
     4861 cacaccatgc acggtaactg gacgctgcaa tacggtttcg ccaaaccgtc cgaacagtcg
     4921 tttaaatttg aagagggtac ggatgcggca ttccacggtt tctggctgtg gccgtgcacg
     4981 atgctgaacg tcaccccgat caaagggatg atgacggtca tttatgaatt cccggtggat
     5041 tctgaaacta ccctgcaaaa ctacgatatt tacttcacca atgaagagtt aaccgacgag
     5101 caaaaatcgc tgattgagtg gtatcgcgat gtgttccgtc cggaagattt acgtctggtt
     5161 gaaagcgtac agaaagggct gaaatcgcgt ggctatcgtg gtcaggggcg catcatggcc
     5221 gacagtagcg gtagtggcat ttccgaacat ggtatcgccc atttccataa tctgctggcg
     5281 caggtgttta aggactaatg acatcggcgg cggtattttc cgctgctggg ctgatttttg
     5341 atggagtaca gcaatgtcag actatcaaat gtttgaagta caggtgagcc aggttgaacc
     5401 ccttaccgaa caggtgaaac gcttcacgct ggtggcaacc gatggcaaac cgctgcctgc
     5461 gttcaccgga ggaagtcacg tcattgtgca gatgagcgat ggtgataacc agtacagcaa
     5521 tgcgtattca ctactgagtt cgccgcatga cacctcttgt tatcagattg ccgttcggct
     5581 ggaggaaaac tcgcgcggcg gttcccgctt tttgcatcag caggtaaaag tgggcaatcg
     5641 gttaacgatt tcaacgccta ataacctgtt tgcgctaatt ccctcagcca gaaagcatct
     5701 gtttatcgcg ggcggtattg gtatcacccc tttcctgtcg cacatggcag agctgcaaca
     5761 cagcgacgtc gactggcagc tacattactg ctcgcgaaat ccagaaagtt gcgcatttcg
     5821 tgatgagcta gtccagcatc cgcaggctga gaaagttcac ttgcatcact catcaaccgg
     5881 aacacgactg gaattagcgc gattattggc ggatatcgaa cctggcacac acgtttatac
     5941 ctgtggtccc gaggcgctaa atgaagcggt aagaagtgaa gctgcgcgtc tggacatcgc
     6001 cgccgatacg ctgcactttg agcaatttgc tatcgaagac aaaaccggcg atgcctttac
     6061 cctggtgctt gcccgttccg gaaaagagtt tgtggtgccg gaagagatga ctattttgca
     6121 ggttattgaa aataataaag ccgcgaaagt ggaatgttta tgtcgtgaag gggtatgcgg
     6181 aacctgcgaa acagcaatac tggaaggtga agctgaccat cgggatcagt attttagcga
     6241 tgaagagcgt gccagccagc aaagtatgtt gatctgttgt tcgcgtgcga agggtaaacg
     6301 cctggtgttg gatttgtagt ttgccaaagc cggatgtggc gctgagcgcg cccagtccgg
     6361 cttcggaaga ttttactgcg gatattcctg caataaattg tgtaatgctt ccgccatcag
     6421 ctcaccacgc cagccggaaa tcagctccgg caaattgttc tgcggtttca gtttccagtg
     6481 ccagttcagc agttggttga tttgccgacg cgatgccagc aattcggcgc tgatcttatg
     6541 cgtttcgctc acgtcagtaa tcagcgactt aatcgcttta aacgctttac gataaccagg
     6601 catgtccatc aggttaagca tcggctgcgg taaggcctct tccggcaatg tctgcgcttt
     6661 ttccaccagc gtcagcagcg ttttaccgtg aaagcggatt tcgctaccgg ataaacccag
     6721 gctgtccagt tcgcctaaac ttcccggcat ataacgcgcg accgaccaca aatgctcttc
     6781 acgcacgaca aagttcaccg ccagatcacg ctctcgcgcc ttgcgcagtc gccagtcggc
     6841 taacagttgc agacaggcca gttggcgtgt gcgtaactgc caggcattgg tgatatcacg
     6901 ccaggcatct tccggcgcaa cgacttcctg acgacgcatt tgcatcaggc ggcattcatc
     6961 cagcgccgca ggtagccagc cggaggcctc cgtttctacc ataagcttgg cggtgatcgg
     7021 taacagatac cagacatccg ccgctgcgta ttcacactga cgttcggtca gcggtctggc
     7081 cagccagtcg gtgcgcgatt cactcttgtc cagcgtaacg ccggaatact cttccaccat
     7141 ggaagcgaaa ccccatgaca tcgggcgtcc gcagaaggca gaaaggattt gcgtgtcaat
     7201 caagggttgt ggtaattcgc caaagacatt gaggaacact tccagatctt cactgcctgc
     7261 atggagaaat tttgtgatgg acggatcgcg caggatcgct ttcagcggtg accagtcggt
     7321 gatcccgaga ggatcaatta gcgccagatg ctcgccatcg aaaagttgaa tcaaccccag
     7381 ctgcgggtaa taagtgcgcg tacgaacaaa ttcagtatcc agggctatcg ccggaaaggc
     7441 acggacggct tcacacaaag aagccagcgc atcgtccgtg gtaatcattt ggtaattcaa
     7501 attgttttct ctttagtggg cgtcaaaaaa acgccggatt aaccggcgtc tgacgactga
     7561 cttaacgctc aggctttatt gtccactttg ccgcgcgctt cgtcacgtaa ttctcgtcgc
     7621 aaaatttttc cgacgttaga tttcggtaac tcatcacgaa actccaccag cttcggtact
     7681 ttgtatcccg tgagctgacg gcggcaaaaa gtcaccagtg actcttcggt aagcgatgga
     7741 tcttttttca ctacgaagat tttcaccgct tcaccactgg agccggaagg tacgccaaca
     7801 gccgcgactt cctgtacgcc aggatgctgc atgacgacat cttcaatctc gttgggatag
     7861 acgttaaaac cggaaaccag aatcatgtct tttttacgat cgacaatgcg caggaatcct
     7921 tcttcatcca ttaccgcgat gtcgccggtg tgtaaccagc catttttgat gatttcatcg
     7981 gtagcatcgg gacgctgcca gtaacccagc atcacctgcg gtcctttgac acaaagctca
     8041 cccggttgac ctggtggtac ttcattatca tcatcatcca ccagtttggc ttccgtcgac
     8101 ggcaccggca aaccgatgct accactatga taatcaatat catatgggtt aacgctgacc
     8161 agcggcgcac actcggtaag gccatagcct tccagcagat actgtccggt cagtttcacc
     8221 caacgctctg ccaccacttg ctgcactggc atcccaccgc ctgcggaaag atgcagactg
     8281 gagaaatcca gctgctggaa ctctttattg ttcagcaacg cattgaacaa ggtgttaacg
     8341 ccagtgatag cggtaaacgg atatttcgct aactctttta ccaaccctgg aatatcacgc
     8401 gggttagtga taagcaggtt ctgcccaccc agttcgataa acagcaggca gttaatggtc
     8461 agggcaaaaa tgtgatacag cggcagtgcc gttactacca gttctttacc tggatgcagc
     8521 aacggcccat aggtggcgtt gacctgttcc aggttcgcca gcatattgcg gtgagtcagc
     8581 atcgcgcctt tcgccacacc tgtggtgccg ccggtgtatt gcaggaaggc taaatcttcc
     8641 ggcaccagtt cgggtttgac gtactgcatc cggtagccgt tatgcagtgc gctacgaaat
     8701 gaaatggcat ctggcagatg gtatttcggc accaaacgct tgatgtattt aacaacgaaa
     8761 ttgactaccg tgccttttgc cgtagatagc tgatcgccca tacgggtcag aattacgtgc
     8821 tgaacggcgg ttttatcaac cactttttcc agtgtgtgag caaagttaga cacgataaca
     8881 accgccgatg cgccgctatc gttaagctga tgctcaagct cacgcggggt atacaacggg
     8941 ttaacgttta cgacgatcat cccggcacgc aaaatgccaa acagcgccac cggatattgc
     9001 aataaattag gcatcatcaa cgcaacgcga tcgcctttct tcagccccac cccttgttgc
     9061 aaataagcgg caaacgcgcg actgcgttct tccagcttgc ggaaggtcat cacctccccc
     9121 atattcacaa acgcaggctg atcggcgtag cgcgcgaccg actgctcaaa catatctacc
     9181 agagattgat aacggtcagg gttgatctcc gtcggaacgt ccgcgggata acggttaagc
     9241 caaaccttct tcaattcttc acctctaaaa tgcgtgttcg tcgtcatcgc aaccccaaat
     9301 gatatacatg ccgttaacat aatattaact catcatacca gcttgataat tacccaacga
     9361 aaaggttgcg aagcgcgtca ctatttattt ttatctttac cgtaagaatg cagaaacagc
     9421 ggaccagccg ctgtttcttt ttctttaaaa acaagcaatt attcagttac aactgtttgt
     9481 actctcgcgg gaccgggatt ataccagccc catccgccgt agccataggg ccagccacga
     9541 ccgccataaa accatggatc aatcggctga ggcggcataa tcacctgctg ggttaaatgc
     9601 caacgtttgt aacccgttac ttgcatcacc ataaatttat agggcgtatt gccgattttg
     9661 ccgtcaaccg caccagtgat tggcccgact accgtaacca gttgtccacg gaaatccacc
     9721 gggtccagaa aaccgttcac atcggcataa atgcgaccgc gagaaggttc tcccagcgtc
     9781 ggtctggctc cgctgtccag cggtacggta gcaatttcca ggcgggtttt cccttgctgg
     9841 ttttgtaccg caaccacttt gccaccaaag cgtgcctcct gaccaacgta cagctgcggc
     9901 gcactcatca cccgaactaa atcttgttgc ggcgtgggac tgcggccttt aatggcgtcc
     9961 ggcacagtga cacaaccgct cagcattagc gcaaacgtac ctgccagtat gcctttgata
    10021 acattctttt gaaccgccat gatgcgactc ctttttttct cagagcatac tcttaagatt
    10081 cattctttgc ccggaagttt cttccatgcg acgttgttac gtaaataaac cggttcggca
    10141 tgttccaccg ccaccgtttt accctcggca aatatctgac acgcaatcgg cagcatatct
    10201 tccgtcgctg gcagtaaaac ttctccgtcg cgcaaaacca gcccgctctc tttaccgaga
    10261 tccggccagg cttgccagcc cgtccctacc gttacccatt cgccggaaag ctgttgcatt
    10321 cgttcatgaa cgagttcggg tttgagtacg gcttcggttt cttcaccgcg ccagataccg
    10381 ttttcatcac gctgatattc ggcccagtaa acttcgccca tccgcgcatc aatggcagcc
    10441 agcacgcggg ttgcgccgtt tttgcgccac gccccttgcg ccattgtcat tagcgtggag
    10501 acgccaatca tcggcagctc tgcgccaagt gccagccctt gcgcaatgcc aataccaatg
    10561 cgcacgccgg taaagctacc ggggccgcgc ccgtaagcca gagcgttaat atcagtcagg
    10621 gaagttccgc tggtggtcag gatatcctgc accatcggta agattcgttg agtatgttca
    10681 cgagggcaaa gctcaaaatg agcgttgaca gtaccgtcgt tccacagggc gacagagcag
    10741 gcctctgtcg cggtatcgat agccagaatt cgcatgggtc ttcgtgctta gatcaataaa
    10801 aaggcgcgca tcataccata ctccgtaaca aattacctgg aggatggtat cgcaaggaaa
    10861 cgaaccgcac gggcaatgtc acgggtgcgc ggcgcgggcg gcagactggc gagaaacgtc
    10921 gcgccgtaag ggcgcatcac cagccgattg tcacaaatca ccaaaacccc gcgatcgtcg
    10981 gcgtcgcgaa tcagtcgccc taccccctgc ttgagagtaa tcaccgcatc cggcagttgt
    11041 acttcatcga acgggtcgcc accgcgcaaa cggcaatctt ccatgcgcgc ttttaacagc
    11101 gggtcatccg gtgaggtaaa cggcaacttg tcgataatca ccaatgacaa tgtatcgcca
    11161 cgcacgtcca ccccttccca gaaactactg gttgccacaa gaagcgcgtt accggcgctg
    11221 acaaattgct gcaacagttg ccctttgctg gtttccccct gcaacaaaac gggaagcgtc
    11281 atggtagcgc ggaactgctc ggccagatca cgcatcatgg cgtgcgaggt acaaagcata
    11341 aaacaacgac cgttgttagc ttcgatgatc ggtcgcagca ttgccgctaa ctggcgagca
    11401 gaacctggct ggttggtttg cggcagattg cgcggcacac agagtaacgc ctggcggctg
    11461 taatcaaacg ggcttggcaa tagcaacgac tccgcctgtt ctatcccaag ccgcgaggtg
    11521 aaatgatgca gatcgtcgtt caccgacagc gttgctgagg tgaagatcca gctaccaggc
    11581 ttttgcgcca ttaactcttt gaatttatcc gccacgctga gcggcgtgag agccagagta
    11641 aaatggcgcg aagtgcattc gtaccagtag ctgtagcccg gctgattgat ctcttttagc
    11701 cgcttcagcc gtgtgcgata caacgtagcg cgctcaaatg ccgcatccag caaggcggaa
    11761 cgccccagtg acagtttcgc cacgtcataa caaagttcca gggtgtcatc gagcagtaaa
    11821 aatgcccgct gaatttgcgg attagctaac agctcacgca ggttaccgcg ataacctggc
    11881 tcaccgagtt gcagacgaaa atcctgcgca ctctgggcaa gacgatcagc gcacttttgt
    11941 aactgctggg tgtcttttaa ttcggtgcgg taggcgatgg tgatgtcttt tgccaggtcg
    12001 agcagttgtc gactggagag tgactgacca aaatactggc tggcaatgtc cggtagctgg
    12061 tgggcttcgt cgaagatcat gacgtccgct tccgggatca gttcgccaaa tccactctct
    12121 ttaaccacca tatccgccag aaagagatga tggtttacca ccaccacatc ggcgtccatc
    12181 gcttttttac gtgctttgac cacaaagcaa tctttataca tcgggcagtc gctgccaaga
    12241 cagttgtcgt tggtgctggt aaccagcggc cacgcctgtg aatcttccgc cacgctgacg
    12301 caggtgctga tatcaccatc gactgtttga ttagaccagg agcgcagcag gatcacatcg
    12361 cttaagattt gtaccggcag atcgcccccc gccagcgcct gctgttcgag acgttcgagg
    12421 cagaggtagt ttgagcgccc tttcagcagc gccacgttgc ccgtatattt caatgccttt
    12481 gagactgttg gcaaatcgcg gctgtagagc tgatcctgca acgcttttga gccggtcgag
    12541 ataatgactt tctttttcgc ccgcagcgca ggagccaggt aagcgtaggt tttgcccgta
    12601 ccggttcctg cttccaccac cagcggctgg cctttttcta tcgcctgggt gacggctacc
    12661 gccatctgtc gctgtggttc tcgcggctta aagcctggta tcgctttcgc cagctgaccg
    12721 tctggtgcaa aatcgtccgt cacactaccc cctgttgatt tgaacgggga ttatgtcagg
    12781 atgagggcgc tttcgccagt tgaagtggtg acggcaacct cacattgtgg cagtctttgc
    12841 agcacgaaaa tggaagtata atgaggacaa aatgatgact atcgttcgta tcgatgctga
    12901 agcccgctgg tctgatgtag taatccacaa caacacgctc tactacactg gtgtaccgga
    12961 aaacctcgac gccgatgctt ttgagcaaac cgccaacacg ctggcgcaga ttgacgccgt
    13021 gctggaaaaa cagggcagca ataaatcgag cattctggat gccaccattt tcctggctga
    13081 taaaaacgac ttcgcggcga tgaataaagc gtgggatgcc tgggttgtgg cgggtcatgc
    13141 gccggtgcgc tgcacggtgc aagcggggct gatgaacccg aagtataaag ttgaaattaa
    13201 gattgtggct gcggtgtaag ctttatcgaa gcaaaataag tcagacgatc atttatcgat
    13261 aatactggtc ggttttacat aaatcgacca gagattaaga tattactgtt gatgctcctg
    13321 ctaattcatt atttattttt ataatttcaa ttttagctat aaagcta
//
LOCUS       DAJVUK010000117        13254 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.117, whole genome shotgun sequence.
ACCESSION   DAJVUK010000117 DAJVUK010000000
VERSION     DAJVUK010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13254
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.117"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(100..3321)
                     /gene="carB"
                     /locus_tag="OQQ57_003064"
     CDS             complement(100..3321)
                     /gene="carB"
                     /locus_tag="OQQ57_003064"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HCS1957739.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
     gene            complement(3339..4487)
                     /gene="carA"
                     /locus_tag="OQQ57_003065"
     CDS             complement(3339..4487)
                     /gene="carA"
                     /locus_tag="OQQ57_003065"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HCS1957740.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
     gene            complement(4942..5763)
                     /gene="dapB"
                     /locus_tag="OQQ57_003066"
     CDS             complement(4942..5763)
                     /gene="dapB"
                     /locus_tag="OQQ57_003066"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HCS1957741.1"
                     /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSRESHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL"
     gene            complement(5930..6844)
                     /gene="rihC"
                     /locus_tag="OQQ57_003067"
     CDS             complement(5930..6844)
                     /gene="rihC"
                     /locus_tag="OQQ57_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HCS1957742.1"
                     /translation="MHLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMSGLDVTNQAILTPDYLATLPELNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIAWLVRPELFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
                     KPANVKVALDLDVKGFQQWVAEVLALAS"
     gene            complement(6910..7860)
                     /gene="ispH"
                     /locus_tag="OQQ57_003068"
                     /gene_synonym="lytB"
     CDS             complement(6910..7860)
                     /gene="ispH"
                     /locus_tag="OQQ57_003068"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HCS1957743.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            complement(7862..8311)
                     /gene="fkpB"
                     /locus_tag="OQQ57_003069"
     CDS             complement(7862..8311)
                     /gene="fkpB"
                     /locus_tag="OQQ57_003069"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCS1957744.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            complement(8380..8874)
                     /gene="lspA"
                     /locus_tag="OQQ57_003070"
     CDS             complement(8380..8874)
                     /gene="lspA"
                     /locus_tag="OQQ57_003070"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HCS1957745.1"
                     /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRLKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR
                     AKKQ"
     gene            complement(8874..11690)
                     /gene="ileS"
                     /locus_tag="OQQ57_003071"
     CDS             complement(8874..11690)
                     /gene="ileS"
                     /locus_tag="OQQ57_003071"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HCS1957746.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHFSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG
                     DELRFVLLTSGATVADYHDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            complement(11733..12674)
                     /gene="ribF"
                     /locus_tag="OQQ57_003072"
     CDS             complement(11733..12674)
                     /gene="ribF"
                     /locus_tag="OQQ57_003072"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HCS1957747.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYVVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            complement(12682..12900)
                     /locus_tag="OQQ57_003073"
     CDS             complement(12682..12900)
                     /locus_tag="OQQ57_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 family protein"
                     /protein_id="HCS1957748.1"
                     /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMK
                     SHFFLISVLNRRLTLTAVQGILGRFSLF"
     gene            13003..>13254
                     /gene="rpsT"
                     /locus_tag="OQQ57_003074"
     CDS             13003..>13254
                     /gene="rpsT"
                     /locus_tag="OQQ57_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HCS1957749.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQIN"
BASE COUNT         3087 a         3756 c         3350 g         3061 t
ORIGIN      
        1 aagatttact taatgggcaa aaaaaacggt cctcatcaga gaaccgtatt acttattcga
       61 tcaaattagc ggatgaaaaa tatccgccat gacacgctat tatttgatct gcgcgtgcat
      121 ttcctgcacc gaaattactt tttcggtcgc gtcggcattc agcgccatcg cggtagcgaa
      181 accaccgttc agggtggtgt cataatgcac tttatattgc agcgcactgc gacggatcac
      241 gcgggagtct tcaatcgcgc gacggcctga agtggtgttg atgatgtagg tatattcgcc
      301 attcttgatg cggtcctgaa tgtgcggacg gccttcatgc accttgttca ccagacgcgg
      361 attaatgccc gcttcgccca gcacaatcgc cgtgccgtgg gtcgcatcca gctcgaagcc
      421 ctgtttcagc agttttgccg ccaggtccac cacgcgttct ttatcgcctt cgcgcacgga
      481 aagcaacgca cgaccgtgtt tcttcatggt ggagttgctg cccagctgcg ctttggcaaa
      541 cgcttcagcg aaggtgcggc ccacgcccat cacttccccg gtggagcgca tttctggccc
      601 taacagcggg tcaacacccg ggaatttatt gaacggcagc accacttctt tcaccgagta
      661 gtacggcggg ataacttctt tggttacgcc ctgctcagcc agcgatttgc cagccatcac
      721 acgcgccgcc acttttgcca gcggtacgcc ggtggctttg gagacgaacg gaacggtacg
      781 cgccgcacgc gggttaactt caatcaggta gacttcgttg tttttcaccg caaactgcac
      841 gttcatcaga ccgcgcacct gcaattcgaa ggccagtttc tgcacctgct ggcgcatcac
      901 atcctgaatt tcctgactta aggtgtaggc tggcagagaa catgcggagt caccggagtg
      961 cacgcccgcc tgctcgatgt gctccatgat gccgccaatc agcaccattt cgccgtcgca
     1021 gatggcatcc acgtcaactt ctaccgcgtc atcaaggaag tgatccagca acactggcgc
     1081 atcgttagac acgctgaccg ccgtctggaa gtagcgacgc aggtcagctt cgtcatagac
     1141 gatttccatc gcccgaccgc cgagaacgta agacggacgt accaccagcg ggtagccaat
     1201 ctctttcgcc ttctctaccg ccatttcaat agcggtaacg gtggcgttcg ccggttgttt
     1261 cagtttcaga cgctcaaccg catgctggaa gcgttcacgg tcttctgcac ggtcgatagc
     1321 atccgggctg gtgccgataa ccggtacgcc agcagcttcc agcgcgcgcg ccagtttcag
     1381 cggggtctga ccgccgtact gaacgataac gcctttcggc ttctcaatac gcacgatttc
     1441 cagcacatct tccagagtta ccggctcgaa gtagaggcga tcggaagtgt cgtagtcggt
     1501 ggagacggtt tccgggttac agttaaccat aatggtttcg taaccgtctt cgcgcagcgc
     1561 cagcgaggcg tgtacacagc agtagtcgaa ttcgataccc tgaccgatac ggttcgggcc
     1621 gccgccgaga accatgattt tttcacggtc ggtagacgga ttcgcttcgc actcttcttc
     1681 ataagtggag tacatgtaag cggtgtcggt ggcgaactct gccgcacagg tatccacgcg
     1741 cttataaacc gggtgcaggt catactggtc gcgcagcttg cggatttccg cttcgcgcac
     1801 gcccgccagt tttgccagac gcgcatcggc aaagcctttg cgtttcagct ggcgcaggaa
     1861 ttcagcgttc aggccagtga tgcccacttc cgctactttc tcttccagac gcaccagttc
     1921 ttcaatctgt accaggaacc agcggtcaat attggtcagg ttgaacacgc cgtccacaga
     1981 caggcccgca cggaaggcat cggcgatgta ccagatacgc tctgcgccag catctttcag
     2041 ttcgcgacgg attttggtta acgcttccgg gtcatcgagg ctcactttcg ggtcgaatcc
     2101 agtcgcaccg acttccaggc cgcgcagcgc tttttgcagg gattcctgct gcgtgcgacc
     2161 aatcgccatc acttcgccaa ccgatttcat ctgagtggtc agacggtcgt tagcaccagc
     2221 gaatttttcg aagttgaagc gaggaatttt agtaaccaca tagtcgatgg acggctcgaa
     2281 ggaggccgga gtacgtccgc cagtgatgtc gttcatcagt tcgtcgaggg tgtaacccac
     2341 cgccagtttc gccgccactt tagcaatcgg gaaaccggtc gctttcgacg ccagcgccga
     2401 agaacgggac acgcgtgggt tcatttcgat aacaatcagg cgaccgtttt tcgggttcac
     2461 cgcaaactgg acattggaac caccggtttc aacgccgatt tcacgcagca ccgccatcga
     2521 ggcgttacgc atgatttgat attctttgtc ggtcagcgtt tgggctggcg cgacagtgat
     2581 ggagtcaccg gtatggatgc ccatcgcatc aaagttttcg atagagcaga cgatgatgca
     2641 gttgtcgttt ttatcacgca ccacttccat ctcgtactct ttccagccga tcagcgactc
     2701 atcaatcagc agctctttgg ttggggagag atccagaccg cgggcgcaaa tttcttcaaa
     2761 ctcttcgcgg ttataagcga taccgccgcc gctaccgccc atggtaaagg atgggcgaat
     2821 aatgcacggg aagcccacgt cagcggcaac cgccagcgct tcttccatcg tgtgtgcgat
     2881 accggaacgc gcggtttcca gaccaatttt cttcatcgct acgtcgaaac gacggcggtc
     2941 ttctgcttta tcaatcgcat cggcggtcgc accaatcata gtcacgccga actcttccaa
     3001 cacgccctga cgctccagct ccagagcgca gttcagcgcc gtctgaccgc ccatcgttgg
     3061 cagcaccgcg tccgggcgct ctttttcaat aatcttgcgt actacttccc agtgaatcgg
     3121 ctcgatgtag gtcgcatcgg ccatttccgg gtcggtcatg atggtcgccg ggttggagtt
     3181 caccagaatg acgcggtaac cctcttcgcg cagggcttta catgcttgcg cgccagagta
     3241 gtcaaactca cacgcctgac cgataacaat cgggcccgca cccagaatca ggatactttt
     3301 tatatctgta cgttttggca tggctctttt actcctgatt acttagcggt tttacggtac
     3361 tgctcaatta actcgataaa gtggtcgaac aacggcgctg cgtcgtgtgg cccagggctg
     3421 gcttccgggt gaccctggaa gctgaacgcc ggtttatcag tgcgatgaat gccctgtaac
     3481 gtaccgtcga acagggattt atgcgtgaca cgcaggtttg caggtaatgt tgcttcatcc
     3541 accgcaaaac cgtggttctg ggcggtgatc atcaccacgt ttttctccac atctttaacc
     3601 ggatggttgc cgccgtggtg accaaatttc attttgacag tcttcgcacc gctcgccagc
     3661 gccagcagct gatgaccgag gcagatgccg aataccggaa tatcggtttc gaggaatttc
     3721 tggatggcgg taatggcgta atcgcacggg gccgggtcgc caggaccgtt ggagaggaag
     3781 atgccgtctg gattcatttt cagcacatct tccgcagaag tttgcgccgg aacgatggtc
     3841 aggcgacagc ctctatccac cagcatccgc aggatgttgc gcttggcacc aaaatcataa
     3901 gccacgacgt ggaacggcag ctcgtcttct tttttcgctt ctggcaggcc gccggtcaac
     3961 gtccagctcc cttgtgtcca gctataggct tctgcggtgg tcacttcttt tgccagatcc
     4021 atgccattca gacctgggaa cgcgcgggct ttttctaacg ccaacgccgc atccgggtta
     4081 tcgcctgcga taatgcagcc attctgtgcg cctttctcgc gcagtaaacg cgtcagctta
     4141 cgggtatcga tatcggcaat cgccacgatg ttatggcgct tcaggtaaga agagaggtct
     4201 tcggtattac ggaagttgct ggcaatcagc ggcaggtcgc gaatcaccag accttgtgca
     4261 tgtacctgag aagattcttc atcggcgtca ttagtgccga cattgccaat atggggataa
     4321 gtaagagtaa cgatttgacg agaataggaa ggatcagtga ggatttcttg ataaccggtc
     4381 attgaagtat tgaaaacgac ttccccaacc gccgaacctg ttgcccctat ggcccgaccg
     4441 tgaaactggg ttccgtcttc cagaaccaat agcgctgact taatcaaaac accctccaga
     4501 gaatattcac tcactttatt tgcatattaa ttcacaatga tgacgtaaat caatgcaaat
     4561 ctgcttaccg acgaatttct ggcaaacggc ggcattctgg agatatgggc gctaaaagtc
     4621 aacttaatgg cgggattttt tatattattt tgtggctcat gcatgtttta caggcattaa
     4681 gcgacaaaaa gatcatataa cctgttctgg aaaacgcttg cacagcaaga agattgcatg
     4741 aaataaaagg gagcagggaa aagtggacca aatggtcaaa ttttacatta aaacaacaaa
     4801 aacagaagac aaaacatgta atttttggca cttatagaca atttaaaaac ataacactaa
     4861 aaataaaagg gccaaaatta aagcccctta taatcaataa attaaatgtg ttatttttgc
     4921 accataacaa atattttgtg gttacaaact attgagatca agcacatctc gcatatcaaa
     4981 aagaccactt tccttaccac tcaaccacaa agccgatctt accgcgccgt tagcaaatgt
     5041 catgcggctg gacgccttat gggtgatctc cagacgctcg ccaatatcgg caaacatcgc
     5101 ggtatgttcg ccaacgatgt cacctgcacg cacggtggca aaaccaatgg tgccaggcac
     5161 acgttcaccg gtgtggcttt cacgactgta gaccgcgcaa tctttcagat ctttatcaag
     5221 ggcgtgggcg atcgcctctc ccattgccag tgcggtgcct gacggcgcat caactttatg
     5281 tctatgatgt gcttcaataa tttcgatatc ggtgtagtca cccatcactt tggctgcttt
     5341 ctccagcagc ttaagcatga cgttaacgcc aacgctaaaa ttggcggcaa agacaatcgc
     5401 aatatcggcg gcagcgtcac gaatcgcctg tttaccggct tcgtcaaacc ccgtagtgcc
     5461 gatcaccatc cctttgccat gctggcgaca aaaagcgaga tggttcagcg taccttccgg
     5521 acgggtaaaa tcgataaaca catcaaaatc atcttttacc gcatcgaggc tgctttgcac
     5581 ggtaacgcct gttttccctg caccagccag ctcaccggcg tcgctgccca gtaaagaaga
     5641 tccttcgcgc tccagcgccg cgcccagctg cacgccttct aatgccagcg ccgcctgaat
     5701 caactggcgg cccatacgcc ccccggctcc cgcgatggca acgcggatgt ttgcatcatg
     5761 catagctatt ctcttttgtt aatttgcata gaccgttttc agagtaacca gcgcatcgct
     5821 acgccgccag ccaaaaacgc tgataattag aaattaatga taaacaggga gggatatcag
     5881 tgaaaggcat gagtcgatga atgactgcat gccgataaca tgtgacaggt tacgacgcca
     5941 gagccagcac ctcagccacc cactgctgga agcctttcac atccagatcc aatgccacct
     6001 ttacattggc tggtttgccc aggcaaccgt cgatatcaac caccgtcgtg cctgaggtaa
     6061 attcgccctg agtttccact gccacaaaac acggtttgag agtgaacaat tccgggcgca
     6121 ccagccaggc aatagcgcaa agatcgtgca tacgcagtcc actttgcata ctgccgctac
     6181 ggtagtggct aaacagggcg tggagcattt ttccggtgcg attcaactcc ggcaaagtag
     6241 cgagatagtc aggggttaat attgcctgat tggtgacatc cagaccgctc atgacgattt
     6301 cgatgccgct acggaagaca caggcagccg cttctggatc ggcagcgata ttaaactcgg
     6361 cgtttggtgt gcagttgccg cgaccagcag aaccgcccat gatcaccaga cgacgaatat
     6421 acggtttaca ttccgggcat tgtgaaagta acagcgcaat attggttaac gggccgatgg
     6481 ccaccagggt aacgggctct ggtgcacgca tcagggcatc ccgaatcgcc agaaacgctg
     6541 gtatcccgag cggctttcgg ttgtgctcaa caaagtcgta gccagccatt cccgattcgc
     6601 cgtgcacaga tgccgcatca cgcggtgcgc gtaccagcgg cacagcggct ccctgggcga
     6661 gcggaatctc cgcattccag aaatgcagca gttgcagggc gttgcgggtg gttttctcaa
     6721 ccgagacatt acccgcgacg gtggtcatca gttgcaggtc gagttcgggt gcaaaaatcg
     6781 cggcggcaat ggcgacggca tcgtcaatgc cggggtcagt atcgaggaag ataggtaaat
     6841 gcatgttttc tccataaaaa atgccggtaa caagaccggc attttcgcat aacttaggct
     6901 gctaatgact taatcgactt cacgaatatc gacacgcagc tctttcggca cttcgaaaac
     6961 aatgttttct tcacggcctt ccagcggaat ggcttcacca ccgcccagct gctgcaaacg
     7021 tgccaccaca ttctgcacca gaatatccgg agccgatgcg cccgcagtca cgccgacgca
     7081 tttaacctct ttcacccact cttcctggat gtctttcgca tcgtcaatca aaaacgcgcg
     7141 tttgcccata cgctgggcca gctccgccag acggttggag ttggaggagt ttttcgaacc
     7201 gaccaccaac acaacttccg cctgttctgc cagggcgcgt accgcttcct gacggttagt
     7261 cgtggcgtag cagatgtcat ctttgcgcgg accgacaatt ttcgggaagc gtttacgcag
     7321 cgcgtcgatc acatcagacg tgtcatccac cgacagcgtg gtctgggtca taaaggagag
     7381 cttctcttcg tttttgaccg tcagtttcca cacatcgtcc ggcgattcga ccagatacat
     7441 tcccccttcc gggttactgt actggcccat tgtcccttcc acttccgggt gcccggcgtg
     7501 accgatgaga atagattctt cgccacggcg actggcgcgg gcgacttcca tatgcacttt
     7561 ggtcaccagc ggacaggtcg cgtcaaatac cgtcaaatcg cgactttttg cttcgttacg
     7621 taccgcctga gaaacaccgt gtgcggagaa aatcaggatc gcgccgtccg gtacttcgct
     7681 aatctgctca ataaagatag ccccacgctc acgcaagcta tcgaccacat agcggttatg
     7741 taccacttcg tgacggacat atatcggtgc gccgtaaatg gccagcgcgt tttcaacaat
     7801 gctgatagcg cggtctaccc cggcacaaaa accacgcggg ttggccaaca ggatctgcat
     7861 gttacgcctc caatgccgga tcgatttcca gcacttcaat atcaaaatga acggtctgcc
     7921 cggccagagg atggttgaaa tcaacggtaa tggagtcgcc gttaatttcg cggatcacgc
     7981 caggcatctc actgccatcc attgcggtaa aaagcatgat tgcgccaatt tctggctcgc
     8041 ctgcatccat aaattcacgg cgggagaagt actgaatcag gtccggtgac ggcacgccaa
     8101 acgccgcatc tggctccaac gagaaggtgg ttttatcgcc cactttcagc cccaacaggt
     8161 gttgctccag cccttcagaa agagaagcat cacccaggcg gaacagcgcc ggtttaccgt
     8221 tgttgcgggt agactcggcg gtggtgccat cgtcgagttt tagcgtgaag tgcaccagga
     8281 cggcgctatt gctctgtaca gattcagaca tgcaggtttg ctcttatatt tgaggatttt
     8341 tgccggatgc ggcgtaaacg ccttatccgg cagggtttat tattgttttt tcgctctaga
     8401 aggcaaaaaa ccttccagca caatcagtgc cgcaccgaca cagatggcag tatcggcaag
     8461 gttgaaggtg gcgaagtgcc agtcgccgac gtagaagtcg atcatatcga caacgaagcc
     8521 gtgccacagg cggtcgaaca ggttgcccag cgcgccgcca ataatcagcg cgtaagcgat
     8581 attgtttagc ttctgcgtgg ccttcaagcg atacatcatc actgccagga tcacgctaat
     8641 accaatcgca ataccggcaa agaaccaacg ctgccagccg ccgctatcgg caaggaaact
     8701 aaacgccgcg ccatagttac gcgcataatg cagattaagc gacgggaaca gcgggaccgt
     8761 atcccccaga gcaaagttct ggaggatcag gtatttgctg cccagatcga taatcagcac
     8821 gactaccacc agccacagcc agcgtagccc tgttgaacag atcgattgac tcatcaggca
     8881 aacttacgtt tttcaccgtc accggcgacg ttgctgacac agcggccgca gatttctgcg
     8941 tgttccgcca ccttgccgac atcctgggtg tagtgccagc agcgtgggca cttctcacct
     9001 tcggctttac tcaacgcgac tttcagccct ttgagtactt cgctctgctg agcatcagca
     9061 ggtgcgtcgt gatagtctgc aacggtagcg ccggaggtca acaggacaaa tcgtaattca
     9121 tcgcccagcg cggtcagttt cgccgccagt tccggttctg catacaaggt tactgccgct
     9181 tccagcgagc cacccacttt cttgtcggca cgcgcttgct caatgacttt gttcacttcg
     9241 ccacgcactt tcaacagctc gtcccagaac gcatcgttca tcgcttcgct gtctgccagg
     9301 ccaaacaggc cttcgtacca ctcaccggtg aagacgtatt tttcacgttc gcccggcagg
     9361 tagccccaca cttcatcagc ggtgaaggag aggattggtg ccatccagcg caccagcgct
     9421 tctgcgatgt gatacagcgc agtctggcag ctacgacgcg ccacactgtc cgctttggcg
     9481 gtgtactgac ggtctttgat gatgtcgagg tagaaggaac ccatctcaac ggagcagaag
     9541 cgcatcagac gctgtaccac ttcgtggaaa tcgtatgctt cgtacgcctt gaggatgtct
     9601 tcctgtgccg ctttcgcaca acctacggcc cagcgatcca gtaccaccat ctcttccggt
     9661 ttcaccatat cttttgctgg atcaaaaccg ttcaggtttg ccagcaggaa gcgcgcggtg
     9721 ttacggatac gacgatagct atcggcagca cgtttcagga tctcgtcaga aacggccatt
     9781 tcaccggtgt agtcggttga tgccacccac agacgcagaa tatccgcgcc cagtttgttc
     9841 atcacatcct gcggcgaaac ggtattgccg atggatttag acatcttgcg gccctgacca
     9901 tccacggtaa agccgtgggt cagtacctga cgatacggcg ctttgccttt catcgcggtg
     9961 gagatcatta gggaagacat gaaccaacca cggtgctggt cagaaccttc cagatacatg
    10021 tccgctgcgt gaccggcaaa ttccggacgc acgtcaacaa cagaaaagtg ggtagatccg
    10081 gagtcaaacc atacatccaa tgtgtccggc actttcacgt actgatcagc ttcatcgccg
    10141 aggatctctt tcgcatcaag atcccaccac gcctggatgc cgtcaacttc aacgcgtttt
    10201 gccacttctt ccattagttc gagagtacgc ggatgcagct cttccgtgtc tttgtgcacg
    10261 aacagtgaca tcggtacgcc ccaggtgcgc tgacgggaga tacaccagtc aggacggtta
    10321 gcaaccatcg actcgatacg cgcctggccc cagtccggga tccactgcac gcctttgatc
    10381 tctttcagtg actgcgcacg cagacctttc tgatccatgc tgacgaacca ctgcggcgtc
    10441 gcgcggaaga tgatcggcgt tttgtgacgc cagcagcacg gatagctgtg ctgcattttc
    10501 tcaacgtgca gcagcgcgcc tttttcctgc agcagcgcaa cgacgatgtc gttcgctttg
    10561 aagacgttca cgccatccag cgtcggataa gtgcccggca gataagtgcc gtccgggcca
    10621 accgggttag cggtttccag gccgtatttc tgaccgatca catagtcgtc cgggccgtgg
    10681 ccaggcgcgg tgtgaacggc accggtaccg gcatccaggg taacgtgatc gccgaggatt
    10741 gccggaacgt cgaagcccat aaacggatgg gtaaagcgca gcaactcaag ctccgcacct
    10801 tttaccgtgc cgagaatggt gtaatcggtc acgccgatac gctgcattac gctttcaacc
    10861 agatctttcg ccagaatcac ggcctgaccg tcgatctgca ccagcgcata gtcgaaatca
    10921 ggtgcaatag agattgcgcg gttcgcaggc agagtccacg gcgtagtggt ccagatcacc
    10981 agcgagattg ggccgttaac gttgcttacg gcaaattttg ctttcagtgc atcctgatcg
    11041 accgcctgaa aagcaacgtc gatggacgga gaagttttgt cgtaatactc aacttccgct
    11101 tccgccagcg cagaacggca gtcaacgcac cagtgtaccg gcttcgcgcc tttgtgcagg
    11161 tgaccgttgc cgatgatttt gcccagcgcg cggatgatgt tggcttcagt tttgaagtcc
    11221 atggtcaggt acgggtgcga ccagtcgccc agcacgccca gacggataaa gtctttgcgt
    11281 tgaccgtcaa cctgggtcgc cgcgtattcg cggcacttgg cgcggaactc ggcggcggtg
    11341 aatttctcac ccggcttacc gtattcttgc tctactttca gctcgatcgg cagaccgtgg
    11401 cagtcccagc caggcacata cggcgagtca taaccggaaa gccctttgga cttcacgata
    11461 atgtctttca gaatcttgtt aaccgagtga ccaatatgaa tgctgccatt cgcataagga
    11521 gggccatcat gcagaatgaa ggtttttttg ccttttttag ccgcacggat gatgccgtac
    11581 agatcatcat cagtccaacg cgccagcatt cccggttcgc gcttggcgag atcgccacgc
    11641 atcgggaacc ctgtttccgg caaattcagg gttgatttat agtcactcat cagattctcg
    11701 gttccgtgtt tcggtttgat tacataacag gcttaagccg gttttgttag cccaaaaaat
    11761 tcgcgggcgg ttaattcatc acgcgcaatc tgcgctttca gttcgtccag cgacgcaaat
    11821 cgctgctcat tgcgtatttt tttacgcagc actacttgta tatggcgacc gtaaaggtcc
    11881 attgcaacat ctaacaaatg cacttccagc tgctggcgaa taccggcaac cgttgggcgt
    11941 gttccgatgt ttgccacgcc gggtaacggc ttttcaccga ggcccagcac ttctaccaca
    12001 taaacccctt tcaccgggga aacctgacgg cgtagcggta cattcgccgt cgggaaacct
    12061 atagtgcgcc ctaattcatc accgtggact acacgcccgg agatggcaaa cgggtgcccc
    12121 agtaaacttt ctgccagagc cagattgtca tccgccagcg cctgacgcac agcggtgctg
    12181 ctaatacgca cgccaccttc gcaaaaagtt tgcgtactag tgatatcgaa gccgtattcc
    12241 atgccagctt tctgtaataa caagaaatcg ccttcacgac cagcgccaaa gcggaaatca
    12301 tcccctacgg caagaaattt tacgcgcaaa tgcttcacca gaagatcgct gatgaaattt
    12361 tgcgcggtta acgccgcgaa acgcctgtcg aaacgcacgc acagcacgta atcaacgcca
    12421 cactctgcaa ggtaacgcag tttttcccgc agccgggtca gtcttgccgg ggctttatcg
    12481 gtagcaaaca gttccagtgg ttgaggttca aaaagcatca ccatcaccgg taagttgcgc
    12541 ttgcgccctt cttcctgcaa gccctgtaac agcgcgcgat gaccgcgatg cacgccgtcg
    12601 aaattaccaa tagtcagcac acacccttct tgcggggcct ggctgagatt atgtatgccg
    12661 cgtatcagct tcatgtctgg ctcaaaacag tgaaaatcgt ccgagtatac cttgtacagc
    12721 ggtcaaggtt aaccggcgat tgagtaccga aatcagaaag aagtggcttt tcattgccat
    12781 ggcgcaaatc acgggaagaa agtgaccgcc tgctgcaatt tttatcgcgg aaaagctgta
    12841 ttcacacccc gcaagctggt agaatcctgc gccatcacta cgtaacgagt gccggcacat
    12901 taacggcgct tatttgcaca aatccattga caaaagaagg ctaaaagggc atattcctcg
    12961 gcctttgaat tgtccatata gaacacattt gggagttgga ccttggctaa tatcaaatca
    13021 gctaagaagc gcgccattca gtctgaaaag gctcgtaagc acaacgcaag ccgtcgctct
    13081 atgatgcgta ctttcatcaa gaaagtatac gcagctatcg aagctggcga caaagctgct
    13141 gcacagaaag catttaacga aatgcaaccg atcgtggacc gtcaggctgc taaaggtctg
    13201 atccacaaaa acaaagctgc acgtcataag gctaacctga ctgcacagat caac
//
LOCUS       DAJVUK010000118        13228 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.118, whole genome shotgun sequence.
ACCESSION   DAJVUK010000118 DAJVUK010000000
VERSION     DAJVUK010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13228
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.118"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            158..505
                     /locus_tag="OQQ57_003075"
     CDS             158..505
                     /locus_tag="OQQ57_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
                     /protein_id="HCS1957750.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
                     DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
                     VAVIVMGLVLYAG"
     gene            495..857
                     /locus_tag="OQQ57_003076"
     CDS             495..857
                     /locus_tag="OQQ57_003076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HCS1957751.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            854..1351
                     /locus_tag="OQQ57_003077"
     CDS             854..1351
                     /locus_tag="OQQ57_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HCS1957752.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(1359..2543)
                     /gene="emrD"
                     /locus_tag="OQQ57_003078"
     CDS             complement(1359..2543)
                     /gene="emrD"
                     /locus_tag="OQQ57_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HCS1957753.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCVGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFLFLAGT
                     AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(2962..3051)
                     /gene="tisB"
                     /locus_tag="OQQ57_003079"
     CDS             complement(2962..3051)
                     /gene="tisB"
                     /locus_tag="OQQ57_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HCS1957754.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            3616..3714
                     /gene="ivbL"
                     /locus_tag="OQQ57_003080"
     CDS             3616..3714
                     /gene="ivbL"
                     /locus_tag="OQQ57_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HCS1957755.1"
                     /translation="MTTSMFNAKLLPTALSAAVVVVRVVVVVGNAP"
     gene            3820..5508
                     /gene="ilvB"
                     /locus_tag="OQQ57_003081"
                     /pseudo
     CDS             3820..5508
                     /gene="ilvB"
                     /locus_tag="OQQ57_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418127.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
     gene            5512..5802
                     /gene="ilvN"
                     /locus_tag="OQQ57_003082"
     CDS             5512..5802
                     /gene="ilvN"
                     /locus_tag="OQQ57_003082"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HCS1957756.1"
                     /translation="MQNTTHNNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            5876..6466
                     /gene="uhpA"
                     /locus_tag="OQQ57_003083"
     CDS             5876..6466
                     /gene="uhpA"
                     /locus_tag="OQQ57_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HCS1957757.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            6466..7968
                     /gene="uhpB"
                     /locus_tag="OQQ57_003084"
     CDS             6466..7968
                     /gene="uhpB"
                     /locus_tag="OQQ57_003084"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HCS1957758.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            7978..9297
                     /gene="uhpC"
                     /locus_tag="OQQ57_003085"
     CDS             7978..9297
                     /gene="uhpC"
                     /locus_tag="OQQ57_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HCS1957759.1"
                     /translation="MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
     gene            9435..10826
                     /gene="uhpT"
                     /locus_tag="OQQ57_003086"
     CDS             9435..10826
                     /gene="uhpT"
                     /locus_tag="OQQ57_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HCS1957760.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
     gene            complement(10871..12637)
                     /gene="adeD"
                     /locus_tag="OQQ57_003087"
     CDS             complement(10871..12637)
                     /gene="adeD"
                     /locus_tag="OQQ57_003087"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HCS1957761.1"
                     /translation="MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDLIN
                     GGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMTPVT
                     FETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCD
                     VNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGL
                     GGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNS
                     PQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLDL
                     LAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQP
                     VSASDFALQFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVCFIAVLERYGQRL
                     APACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDGGGLCVVRNG
                     QVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPAL
                     KLTSQGLFDGEKFVFTTLEVTE"
     gene            12812..>13228
                     /gene="adeQ"
                     /locus_tag="OQQ57_003088"
                     /gene_synonym="yicO"
     CDS             12812..>13228
                     /gene="adeQ"
                     /locus_tag="OQQ57_003088"
                     /gene_synonym="yicO"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeQ"
                     /protein_id="HCS1957762.1"
                     /translation="MNNDNTDYVSNESGMLSRLFKLPQHGTTVRTELIAGMTTFLTMV
                     YIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFV
                     VVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMIS"
BASE COUNT         2940 a         3443 c         3679 g         3166 t
ORIGIN      
        1 cctcgtcctt cagggcgtgg aggatgtcaa tttgcgctat gatacccatc tgacctcctt
       61 gtagcggatg gcaaaagcat atcaggaaac gggcggacga aattcttaaa aaaaaccgct
      121 aaagatagag cgttagtgaa attgcaaagg agcaacaatg aaaatttccc gccttggaga
      181 agcgcccgat taccgcttct cgctggctaa tgagcgtact tttctggcgt ggatccgtac
      241 cgcactagga tttctggcgg cgggggttgg gcttgatcaa cttgcgccag atttcgccac
      301 gcccgtcatt cgtgaactgc tggcgttgtt gttgtgtctg ttttccggcg ggttagcaat
      361 gtatggctac ctgcgctggt tacgcaatga aaaagcgatg cgtctgaaag aggacctgcc
      421 ctacaccaac agcttattaa tcattagctt aatattgatg gtcgtggcgg tgatcgttat
      481 gggactggtg ttgtatgccg gatagccgca aagccagacg cattgccgac ccaggactgc
      541 agccggagcg cacatcactg gcgtggtttc gtaccatgct gggctacggc gcgttgatgg
      601 cgttggctat caaacacaac tggcaccagg cgggcatgtt attctggatt tcgattggca
      661 ttctcgccat cgtggcgctg atcctctggc actacacccg taatcgcaat ttaatggatg
      721 tcacgaatag cgatttttcc caatttcacg tagtccgtga caaatttttg atctccctcg
      781 cggtgttatc tctcgcaata ctgtttgctg taacgcatat acatcaactt atcgtattta
      841 ttgagagagt cgcatgacag gaagtcaggt cattgatgct gaagaggaca ggcataaact
      901 ggttgtagag tacaaggatg ctctgcaacc tgccgatttt tatcacaatt tcaaacagcg
      961 gggcatccgc tccgtacagc tcattcccta tcttgaattt gatgaccggg gcgatctgac
     1021 ggccgcttcg gtgacagcag agctgtgggg gaaattttta attgccctgt tcgagtgttg
     1081 ggtgcgggca gatatcagtc gtatctcgat tgagcttttt gacgccacct tacaaaaatg
     1141 gtgtggcggc gaaaacccgc aaccgcgccg tgactgccag gcgtgcgact ggcatcgcct
     1201 gtgcccgcac gctcggcagg agacgccaga cagcgtgctt tgtgcgggct atcaagcgtt
     1261 ttattcttac tccgcaccgc atatgcgggt gatgcgtgat ctgataaagc agcatcgttc
     1321 tcccatggag ctgatgacga tgctgcggtg acgtgcgctt aaacgggctg cccctgatgc
     1381 gacatccgcg tcgccagcgg cagccagcac agcacgatca acaatcccat taaggtcatc
     1441 aataacccca ggctaccctg accggtttgc ggcaacatcg cagagagcga cgccagcacg
     1501 ccggaaccaa tgttttgcag accgccgacc agcgcgccag ccgtgcccgc caggaagagg
     1561 aacggctcca tcgcgccgct ggtcgccagc ggaaacagca tcccggcacc gaaaaagaac
     1621 agcgcggcgg gaacgagcag cgtccagaca ttcatcacgc caaaccagtc ggggatccac
     1681 atcagcaagc cagccagcag gcagcagata accgactgcc acattaacgt ggagaagcgt
     1741 ttattgggac gtccggcaaa ccatgcgcca aaaaacgctg ccggaatcgg cagaataaac
     1801 aaaatactga ccgtcatact gctcagccct aacaccgcgc ccatcagcac gccggagcag
     1861 gcttcaaagg cggcaatccc ggccagaccg ccaatcagca tcagcaaata acagttaaaa
     1921 ccgctgttac cgaaaagcgt tttataactg gtaagcaggc gcgtgcgcgg tgcatcgacc
     1981 ggacgcgttt ccggcatcca gcgggccata ctgaaggtca caccaacaca aagaaccaac
     2041 aaaaagagat aacaggcgcg ccagttccac atcgtatcca gcagaccgcc gattagcggt
     2101 gcgagcaacg gactgacgag aatccccatg tttaacaggc tgttagcatg gcgcaactgt
     2161 gtccgttcat ataaatctcg cggcaaagta cgcgccatta cgccgccaac gccggtgccc
     2221 atcccctgca tcgcgctggc ggcaatcaat accgtcaaac tggaggtcgt gaccgcgacc
     2281 agcgttgcca gcataaaaat ggacattccg acgaggatca ccggtcggcg acccacacgg
     2341 tcggaaatcg ggccataaaa cagctgtgag acaccgtaag tcagcagata agcgcccatt
     2401 acgctctgca ccgccccttc acggacgttg agatcgcgcg ccatatcggc aatagctgga
     2461 atataaatgg tttgcgccat ctgaccgacg gccacgagta ataccaacat caataacaaa
     2521 ttgacgtttc tttgcctttt cattatcacg gatgctttta taaaaataat tagaataagt
     2581 cactacgcat tcccataaat gcgggagagg aatctatcac attgatgaat gttagccaga
     2641 tatacgccag gaatggggaa ttgtttagcg gcagaatatg taaacaaaag cggcaataaa
     2701 tgttgccggg agggattacg tgcgaactgt aaccctctcc ccaaaggggc gagggggaaa
     2761 ccaccgttcc ctttcagaaa atgagctaaa cattgcacgg gacggtcccc tcgccccttt
     2821 ggggagaggg ctagggtgag gggcacaggc agcgcaggtg caaacattct gctggtagaa
     2881 gaagccccca actccaaccc gcacgctaaa tataaaaggg gagcggttac ccgctcccct
     2941 ttggtgcgac ttgaatctga attacttcag gtatttcaga acagcatcaa gcagttgcag
     3001 tgctgcaaca atgagtttga ggataagaat ggcgatatcc accaggctca tacgcgtctc
     3061 ctgtggttca ggagcactgc cagctgacgt acctttccgc tgcctgttgc cagctgttgt
     3121 gcacgcggta tctcaaggag aaacgttgtg cttgttgaca taacacagtg tgctcacgcg
     3181 gggttaaggc gctgacggca ccacccgttt cagccaggac ttagtgcgcc gggtaacgat
     3241 gcggcccccg cataatacat tgcgtacagt gatattatag aagtttactg tataaataaa
     3301 cagtgatatt tggacaaaac gcaaactgtg atcgatactc aactatgccc taaatacgtc
     3361 aaaattcgtg ccgaaattgc gcgttctgcg cggaacacgt atactttcag tgttgacata
     3421 atacagtgtg ctttgcggtt accagctgca ggcggctgat gaaacctcgc tccggcgggg
     3481 ttttttgtta cctgcaattc agtacaaaac gtgatcagcc cctcaatttt cccttgctga
     3541 aaaattttcc attgtctccc ctgtaaagct gtgcttgtat aaatattgtt aaacacaaaa
     3601 ccaacaaggt ccccaatgac tacttccatg ttcaacgcaa aactactacc aactgcgcta
     3661 tccgccgcag tggtcgtcgt gcgtgtggtg gtggtcgtcg gcaatgcgcc gtagggactg
     3721 gaacaacaca cgattccaaa accccgccgg cgcaaaccgg gcggggtttt tcgtttaagc
     3781 acctcccgga aagtcggccc agaagaaaag gactggagca tggcaagttc gggcacaaca
     3841 tcgacgcgta agcgctttac cggcgcagaa tttatcgttc atttcctgga acagcagggc
     3901 attaagattg tgacgggcat tccgggcggt tctatcctgc ctgtttacga tgccttaagc
     3961 caaagcacgc aaatccgcca tattctggcc cgtcatgaac agggcgcggg atttatcgct
     4021 caggggatgg cgcgcaccga cggtaaaccg gcggtctgta tggcctgtag cggaccgggt
     4081 gcgactaacc tggtgaccgc cattgccgat gcgcggctgg actccatccc gctgatttgc
     4141 atcaccggtc aggttcccgc ctcgatgatc ggcaccgacg ccttccagga agtggacacc
     4201 tacggcatct ctatccccat caccaaacac aactatctgg tcagacatat cgaagaactc
     4261 ccgcaggtca tgagcgatgc cttccgcatt gcgcaatcag gccgcccagg cccggtgtgg
     4321 atagacattc ctaaggatgt gcaaacggca gtttttgaga ttgaaacaca gcccgctatg
     4381 gcagaaaaag ccgccgcccc cgcctttagt gaagaaagca ttcgtgacgc agcggcgatg
     4441 attaacgctg ccaaacgccc ggtgctttat ctgggcggcg gtgtgatcaa tgcgcccgca
     4501 cgggtgcgtg aactggcgga gaaagcgcaa ctgcctacca ccatgacttt aatggcgctg
     4561 ggcatgttgc caaaagcgca tccgttgtcg ctgggtatgc tggggatgca cggcgtgcgc
     4621 agcaccaact atattttgca ggaggcggat ttgttgatag tgctcggtgc gcgttttgat
     4681 gaccgggcga ttggcaaaac cgagcagttc tgtccgaatg ccaaaattat tcatgtcgat
     4741 atcgatcgcg cagagctggg taaaatcaag cagccgcatg tggcgattca ggcggatgtt
     4801 gatgacgtgc tggcgcaatt gatcccgcag gtggaagcgc aaccgcgtgc agagtggcac
     4861 cagttggtag cggatttgca gcgcgaattc ccgtgtccaa tcccgaaagc gtgcgatcca
     4921 ttaagccatt acggcctgat caacgccgtt gccgcctgtg tcgatgacaa tgcgattatc
     4981 accaccgatg tgggtcagca tcagatgtgg accgcgcaag cttatccgct caatcgccca
     5041 cgccagtggc tgacctccgg tgggctgggc acgatgggtt ttggcctgcc tgcggcgatt
     5101 ggcgcggcgc tggcgaaccc ggatcgcaaa gtgttgtgtt tctccggcga cggcagcctg
     5161 atgatgaata ttcaggagat ggcgaccgcc agtgaaaatc agctggatgt caaaatcatt
     5221 ctgatgaata acgaagcgct ggggctggtg cattagcaac agagtctgtt ctacgagcaa
     5281 ggcgtttttg ccgccaccta tccgggcaaa atcaacttta tgcagattgc cgccggattc
     5341 ggcctcgaaa cctgtgattt gaataacgaa gccgatccgc aggctgcatt gcaggaaatc
     5401 atcaatcgcc ctggcccggc gctgatccat gtgcgcattg atgccgaaga aaaagtttac
     5461 ccgatggtgc cgccaggtgc ggcgaatact gaaatggtgg gggaataagc catgcaaaac
     5521 acaactcata acaacgtaat tctggagctc accgttcgca accatccggg cgtaatgacc
     5581 cacgtttgtg gcctttttgc ccgccgcgct tttaacgttg aaggcattct ttgtctgccg
     5641 attcaggaca gcgacaaaag ccatatctgg ctactggtca atgacgacca gcgtctggag
     5701 cagatgataa gccaaatcga taagctggaa gatgttgtga aagtgcagcg taatcagtcc
     5761 gatccgacga tgtttaacaa gatcgcggtg ttttttcagt aaccgctcaa ggcttgaaca
     5821 acatcgcgct tatcgttaag gtaagcgcgt tttttttacc cgccaggaca agaccatgat
     5881 caccgttgcc cttatagacg atcacctcat cgtccgctcc ggctttgcgc agctgctggg
     5941 gctggaacct gatttgcagg tagttgccga gtttggttcg gggcgcgagg cgctggcggg
     6001 gctgccgggg cgcggtgtgc aggtgtgtat ttgcgatatc tccatgcccg atatctccgg
     6061 tctggagctg ctaagccagc tgccgaaagg tatggcgacg attatgctct ccgttcacga
     6121 cagtcctgcg ctggttgagc aggcgcttaa cgcgggggca cgcggctttc tttccaaacg
     6181 ctgtagcccg gatgaactca ttgctgcggt gcatacggtt gccacgggcg gctgttatct
     6241 gacgccggat attgccatta aactggcatc cggtcgtcag gacccgctaa ccaaacgtga
     6301 acgccaggtg gcggaaaaac tggcgcaagg aatggcggtg aaagagattg ccgccgaact
     6361 gggcttgtca ccgaaaacgg tacacgtcca tcgcgccaat ctgatggaaa aactgggcgt
     6421 cagtaacgac gtagagctgg cgcgccgcat gtttgatggc tggtgatgaa gacgttgttc
     6481 tcccgcttaa ttaccgttat tgcctgcttt tttatcttct ctgccgcatg gttttgcctg
     6541 tggagtatca gcctgcatct ggttgagcgc cctgatatgg cggtgctgtt atttccgttt
     6601 ggtctgcgtc tggggctaat gctgcaatgc ccgcgcggat actggccggt gctgctgggc
     6661 gcggagtggc tgctgattta ctggctaacg caggcggtcg gtttaaccca ttttccgtta
     6721 ttgatgatcg gtagtttact gacgttactg cccgtagcgc tgatctcgcg ctatcgccat
     6781 cagcgtgact ggcgcacctt gctgttacag ggggcggcgt taacggcggc ggcgttgttg
     6841 cagtcgctgc cctggctttg gcacggcaaa gagtcgtgga atgcgctgtt gctgacttta
     6901 actggcggcc tgacgctggc cccgatatgt ctggtgttct ggcactatct cgccaataac
     6961 acctggctgc cgctcggccc gtcactggtt tctcagccaa tcaactggcg cgggcgacat
     7021 ctggtctggt acttgctgct gtttgttatc agtctctggc tccagttggg attgccggac
     7081 gaactgtcgc gctttacgcc attctgtctg gcgctgccga ttatcgcgct ggcctggcac
     7141 tatggttggc aaggggcgct gattgcgacg ttgatgaacg ccatcgcgct gatcgccagt
     7201 caaacctggc gcgatcatcc ggtggattta ttgctctcgc tgctggtgca aagtctgaca
     7261 gggttgttgc ttggcgctgg catccagcgg ttgcgtgaac ttaaccagtc gctgcaaaag
     7321 gaactggcgc gcaatcagca tctggctgaa cggttgctgg aaaccgaaga gagcgtgcgc
     7381 cgtgatgtgg cgcgtgagct gcatgatgat atcggtcaga ccatcactgc tattcgtact
     7441 caggcgggca ttgttcagcg gctggcggca gataacgcca gcgtgaagca gagcgggcag
     7501 ctcatcgaac aactatcgct gggcgtttac gacgcggtgc gccgtttgtt gggtcggtta
     7561 cgtccgcgcc agttggatga tctcaccctg gagcaggcca tccgctcact gatgcgggaa
     7621 atggagctgg aagggcgcgg tattgtcagc catctcgaat ggcgaatcga tgaatcagcg
     7681 ttaagcgaaa accagcgcgt gacgctgttt cgtgtctgcc aggaagggct gaacaacatt
     7741 gtgaaacatg ctgatgccag cgcggtcacc ctgcaaggct ggcagcagga tgaacggttg
     7801 atgctggtta ttgaagacga tggcagcggt ttgccgccgg gttccgggca acaaggtttt
     7861 ggcctcaccg gaatgcgcga gcgcgtaacg gcgctgggtg gcacattaca catttcctgt
     7921 ctgcacggca cgcgtgtcag cgtttctcta cctcaacgct atgtctaagg tttgatgatg
     7981 ttgccgtttc tgaaagcgcc tgccgatgcg ccattaatga ctgataaata tgaaattgat
     8041 gcccgctatc gctactggcg tcggcatatt ctgctgacca tctggctggg ttacgcgctg
     8101 ttttacttca cgcggaaaag ttttaacgcc gccgtaccag aaatccttgc taacggcgtg
     8161 ctcagccgta gcgatatcgg cctgttagcg accctgtttt acattaccta tggcgtgtcg
     8221 aagtttgtct ccggcattgt cagcgatcgc tcaaatgccc gttattttat ggggataggg
     8281 cttatcgcca cgggcattat caacattctg tttggcttct cgacgtcgct atgggcgttt
     8341 gccgtactct gggtgctgaa cgcctttttc cagggctggg gttcaccggt gtgtgcgcgt
     8401 ctgttaacgg cctggtattc acgtaccgag cgcggtggtt ggtgggcatt atggaacacg
     8461 gcgcataacg tcggcggcgc actcattccc attgtgatgg cagcggctgc actacattac
     8521 ggctggcgtg ccgggatgat gattgctggt tgtatggcga tcgtcgtggg aatttttctc
     8581 tgctggcggc tgcgcgatcg cccgcaggcg ttaggtttac cggcggtcgg tgaatggcga
     8641 cacgacgcgc tggagatagc tcaacaacaa gaaggggcag ggctgacgcg taaagagatc
     8701 ctcaccaaat atgtgttgct gaatccgtat atctggctgc tttcgttttg ctatgtgctg
     8761 gtctatgtgg tccgggcggc gatcaacgac tggggcaatt tgtatatgtc cgagacgctg
     8821 ggcgtcgatc tggtcacggc gaatacggca gtgacgatgt ttgaactggg tggatttatc
     8881 ggtgcgctgg tagcgggttg gggctcggac aaattgttta acggcaaccg agggccgatg
     8941 aatttgattt tcgccgccgg aattttgctt tcagtcggct ccctgtggct gatgccattt
     9001 gccagctacg tgatgcaggc aacctgcttc ttcaccattg gtttttttgt ctttggccca
     9061 cagatgttaa tcggtatggc ggcggcagag tgttcccaca aagaggcggc aggggcggcg
     9121 acggggtttg tcggcttgtt tgcttatctg ggggcgtcgc ttgctggttg gccgctggcg
     9181 aaagtactcg atacctggca ctggagcgga ttttttgtgg ttatctctat cgccgccggg
     9241 atttccgcac tgctgttact gccctttttg aacgcccaga caccgcgcga agcgtgatgc
     9301 atctcacctt ttcacttcat atccggcaaa actaagaaat tttccaggtt ttgcctggac
     9361 gctatctcag gcctgatttg ctgctgattt ttacaatgca tgcctcacgc aggtattcat
     9421 ttcaggagta acccatgctg gctttcctaa accaggttcg caagccgacc ctggaccttc
     9481 cgctcgaagt gcggcgcaaa atgtggttca aaccgttcat gcaatcctac ctggtggtct
     9541 ttatcggcta cctgacgatg tacctgattc gcaagaactt taacatcgcg cagaacgata
     9601 tgatttcgac ctacgggttg agcatgacgc agctggggat gatcggcctg ggtttctcca
     9661 tcacttatgg cgtgggtaaa acgttggttt catactacgc cgacggcaaa aacaccaaac
     9721 aattcctgcc gttcatgctg atcctgtctg ccatttgtat gctgggcttc agtgccagta
     9781 tgggcagcgg ctcggttagc ctgttcctga tgattgcctt ctacgcctta agcggctttt
     9841 tccagagtac cggcggttcg tgcagttact ccaccatcac caaatggacg ccgcgtcgta
     9901 aacgcgggac attcctcggt ttctggaata tttctcacaa ccttggcggt gcaggcgcag
     9961 caggtgtggc gctgttcggg gcaaattacc tgttcgatgg ccatgtcatc ggcatgttta
    10021 tcttcccgtc gattatcgcg ctgattgtcg gttttatcgg cctgcgttac ggcagcgact
    10081 ccccagaatc ttatggcctc ggcaaagctg aagaactgtt cggcgaggag atcagcgaag
    10141 aggacaaaga gacagaatct accgatatga ccaagtggca gatctttgtt gagtatgtgc
    10201 tgaaaaacaa agtgatctgg ctgctgtgct tcgccaacat tttcctctat gtggtacgta
    10261 ttggtatcga ccagtggtca accgtatacg cgttccagga actgaaactc tctaaagcgg
    10321 tggcgattca gggctttacg ctgtttgaag ctggtgcgct ggtcggtacg ctgctgtggg
    10381 gctggctctc tgacctggcg aacggtcgcc gtggcctggt ggcctgcatc gcgctggcgc
    10441 tgattatcgc cacgctcggt gtgtatcaac atgccagcaa cgaatatatc tatctggctt
    10501 ctctctttgc gttgggtttc ctggtctttg gcccgcaatt gttgattggt gtggctgctg
    10561 ttggctttgt acctaaaaaa gcgattggcg ctgccgatgg tattaaaggc acctttgctt
    10621 acctgattgg tgacagcttt gccaagttag gtctgggaat gattgccgat gggacgccgg
    10681 tattcggcct taccggctgg gcaggcacct tcgccgcact tgatatcgcc gcgattggtt
    10741 gtatctgcct gatggcgata gtggcggtga tggaagaacg caaaatccgc cgcgagaaaa
    10801 aaattcagca gttgacagtg gcataaacgt aactggtgac ttttgcccgg catgacgccg
    10861 ggctttttta ttattccgtg acttccagcg tagtgaagac aaacttctcg ccatcaaata
    10921 gcccctgact ggttagtttg agcgcgggga tcactggcag agaaagaaac gccatctgaa
    10981 taaacggctc atcgggtaac ggaccgcatt cacgggcggc ggctttcaag gcgtcaattt
    11041 gttccgccag cgactgcgcc gtgtcggtgc tcatcaggcc ggcaatgggc aacggcagat
    11101 gactttggac ctggccgtta cgtaccacgc acagcccgcc gccatcctga atcacctgat
    11161 agaccgccag cgccatctct tcggcactgc gaccgatcac cacaatatta tggctgtcat
    11221 ggctgaccgt cgcagccagc gcaccttcat tcagtccaaa gccgccaagc aaaccacaag
    11281 ccggagccag ccgttgcccg taacgctcaa gtacggcaat aaagcacaca tcatcgcgat
    11341 caaaaccatt ttcgctgtag acgctggagt gggagtgcgt aatcaattcg ttatggatga
    11401 cgtcaatgac ccgatagcgt tttccgggcg taaattgcag ggcaaagtcg ctggcggaaa
    11461 ctggctggcg ggcaatggtg ttgccatatg gcggagcgga ttgtgccagt ctcgccgact
    11521 cttccgcctg taaggtttgc gcatcaatcg gctcgccttt caccagtacc tgctgcaccg
    11581 tgaccttacg cgcatcgctc aacaggacga tatcggcctg cttgccgggt gccagtaagt
    11641 cgaggtgatt cagaccaaag tggcgcgccg tcgaccagct ggcgacgcga tatgccacat
    11701 gcagcggcac attgtgttgt tcgatcaggc ggcgaattaa ggcatcgatg tgtccttcat
    11761 gggcgatctc ccacgggtta cggtcatcgg tacagagcat gcattgcggg ctgttaaatt
    11821 cgttgatcaa cggtgccagc gcgttgagat tgcgggcagc ggacccttcg cggatcatca
    11881 acgacatgcc gagttgtaat ttccggcgtc cttcttccag ctgataactt tcgtggcagt
    11941 tttcaatacc cgcagtaata taggcgttaa gttctttacc acccaaaccc gggcagtgac
    12001 cgtccagcgt caggtggcga aatgcatcca gtttatcgag cagcgcattc tgcccgctaa
    12061 ttacgccagg gtagtccatc atttctgcaa ggccggtaac ctgcggatgg tcccgccagg
    12121 cgagcatctg ttcaagggta aaactggcac cgttaacatc gcagccttcc agggcgggta
    12181 cgcaagagct gacctgtaag tactggtttt gccttgcctg ttcggcacag cgggcaaacc
    12241 aggcgaatcc ggcttctccc atcacgttga cgatttcatg agggtcgcaa ataacggtcg
    12301 tcaggccgcg cggcagggta gcggtttcaa aggtgaccgg cgtcatcatg ctggattcaa
    12361 tatgcaggtg agcatcaata aaccctggca ccgccgttgc gccgcgagca tcaatccgct
    12421 gcaaagccgg agcatcagcg tattctgcgc caacaccggc aatgtaacgt cctttaatca
    12481 caattgggcc ggaaatttct ccgccattga tcaggtcgag aatagagaca ttatcaataa
    12541 tataatcggc aacagcgtcg ccacgggaaa cggctaacaa ttcctggtat tcagcccggc
    12601 taatgtgatg aaatttatgg ttaatggaat tattcatatt tttctcattt tgattttatc
    12661 aatttgatta ttatttatca taaagaaacg tcgcgagatt attaaagaat atctattaat
    12721 gtgcaattga aatgtgataa ttatcactga accgttgttg tcatttgttt tacaaaagca
    12781 agggattaaa tctcctccaa tggacaaaaa aatgaataat gacaataccg attacgtgag
    12841 taatgaatca gggatgcttt cgcgattatt taaactacct cagcatggga ccaccgtccg
    12901 cacagaattg attgcgggga tgaccacttt tttaaccatg gtgtacatcg tttttgtgaa
    12961 cccgcaaatc ctcggcgcgg cacaaatgga cccgaaagtg gtgtttgtta ccacctgttt
    13021 gattgccggt atcggcagta ttgcgatggg gatatttgct aacttacccg tggcgctggc
    13081 tccggcaatg gggctgaacg ccttctttgc cttcgtggtc gtgggggcga tgggcatctc
    13141 ctggcagacc gggatgggcg caatattctg gggcgcagtt ggactatttt tgctcacgct
    13201 gtttcgtatc cggtactgga tgatctcc
//
LOCUS       DAJVUK010000119        13092 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.119, whole genome shotgun sequence.
ACCESSION   DAJVUK010000119 DAJVUK010000000
VERSION     DAJVUK010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13092
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.119"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            4..1632
                     /locus_tag="OQQ57_003089"
     CDS             4..1632
                     /locus_tag="OQQ57_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001338794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HCS1957763.1"
                     /translation="MFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMS
                     GGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIA
                     TAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAED
                     LSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLIQETERRRRERNEVEQDVEV
                     AVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRI
                     LAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQS
                     QAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAE
                     KEAAEMQAAAIVKLAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPA
                     VIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAP
                     LIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            1871..1930
                     /locus_tag="OQQ57_003090"
     CDS             1871..1930
                     /locus_tag="OQQ57_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCS1957764.1"
                     /translation="MMKLVIILIVLLLVSFAAY"
     gene            2247..2306
                     /gene="ibsE"
                     /locus_tag="OQQ57_003091"
     CDS             2247..2306
                     /gene="ibsE"
                     /locus_tag="OQQ57_003091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsE"
                     /protein_id="HCS1957765.1"
                     /translation="MMKFVIILVVLLLLSFPTY"
     gene            complement(2426..3859)
                     /gene="hldE"
                     /locus_tag="OQQ57_003092"
     CDS             complement(2426..3859)
                     /gene="hldE"
                     /locus_tag="OQQ57_003092"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HCS1957766.1"
                     /translation="MKVTLSEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(3907..6747)
                     /gene="glnE"
                     /locus_tag="OQQ57_003093"
     CDS             complement(3907..6747)
                     /gene="glnE"
                     /locus_tag="OQQ57_003093"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HCS1957767.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQSPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTEESILQQLSHLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSVIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNDREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFN
                     TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMMLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
     gene            complement(6770..8071)
                     /gene="ygiF"
                     /locus_tag="OQQ57_003094"
     CDS             complement(6770..8071)
                     /gene="ygiF"
                     /locus_tag="OQQ57_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HCS1957768.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKA
                     STHLRDLLTQCEATIASAVSAVTAVYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKM
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            8313..8933
                     /locus_tag="OQQ57_003095"
     CDS             8313..8933
                     /locus_tag="OQQ57_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HCS1957769.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
                     RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
                     KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
                     QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPTRKRKERWMN"
     gene            8997..10235
                     /gene="cca"
                     /locus_tag="OQQ57_003096"
     CDS             8997..10235
                     /gene="cca"
                     /locus_tag="OQQ57_003096"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HCS1957770.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(10392..11213)
                     /gene="bacA"
                     /locus_tag="OQQ57_003097"
     CDS             complement(10392..11213)
                     /gene="bacA"
                     /locus_tag="OQQ57_003097"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCS1957771.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(11304..11672)
                     /gene="folB"
                     /locus_tag="OQQ57_003098"
     CDS             complement(11304..11672)
                     /gene="folB"
                     /locus_tag="OQQ57_003098"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HCS1957772.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            11777..12394
                     /gene="plsY"
                     /locus_tag="OQQ57_003099"
     CDS             11777..12394
                     /gene="plsY"
                     /locus_tag="OQQ57_003099"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HCS1957773.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            complement(12407..>13092)
                     /gene="ttdR"
                     /locus_tag="OQQ57_003100"
                     /gene_synonym="dan"
     CDS             complement(12407..>13092)
                     /gene="ttdR"
                     /locus_tag="OQQ57_003100"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HCS1957774.1"
                     /translation="VDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQV
                     HFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSL
                     QELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIML
                     RSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLG
                     KPDEGYQVM"
BASE COUNT         3163 a         3682 c         3282 g         2965 t
ORIGIN      
        1 tggatgttta ccgcgattat tgccgtatgc attctgttta ttattggaat tattttcgcc
       61 aggctctatc gtcgcgcttc ggcagagcaa gcttttgttc gtactggttt aggtgggcaa
      121 aaagtggtga tgagcggtgg cgcaatcgtg atgccgatct ttcatgaaat aatccccatc
      181 aatatgaata ctctgaagct ggaagtcagc cgctcaacca ttgatagcct gattacgaaa
      241 gatcgtatgc gtgtcgatgt agtagtcgct ttctttgtac gggtaaaacc gtctgtagaa
      301 ggcatcgcca ctgcggcgca gacgttgggg caacgcacgc tatcaccaga agacttacgt
      361 atgttggttg aagataaatt tgtcgatgcc ctccgtgcaa cagctgcaca aatgaccatg
      421 catgagttac aggatacccg cgagaacttc gtgcagggag tacaaaatac tgtcgcagaa
      481 gacctgtcga aaaacggtct tgagctggaa agcgtttcac ttaccaactt taaccagacc
      541 tcgaaagaac atttcaatcc gaacaatgcc tttgacgccg aaggtttaac caaactgatt
      601 caggagacgg agcgccgtcg tcgcgaacgt aacgaagttg aacaggatgt agaagttgcg
      661 gtgcgtgaga aaaaccgtga tgcactttcg cgcaagttgg agattgaaca acaagaagcg
      721 tttatgacgc ttgagcagga gcagcaggtt aaaacccgta ctgccgaaca gaatgcacgt
      781 attgcggctt ttgaagctga acgtcgtcgt gaagcagagc agacgcgaat tctggctgaa
      841 cgacaaattc aggaaacgga gatcgagcgc gagcaggccg tccgctcaag aaaggttgag
      901 gctgaacgtg aagttcgtat taaagagatc gaacagcagc aggtcaccga aatcgccaac
      961 cagacgaaat cgatcgctat tgccgccaaa tcggaacaac agtcccaggc agaagcgcgt
     1021 gctaaccttg cactcgcaga agcagtaagt gcgcaacaaa acgtagaaac cactcgacag
     1081 accgcagaag ccgatcgtgc taaacaagtt gccctaatcg ctgccgcgca ggatgcagaa
     1141 accaaagcgg ttgaactgac cgtgcgggcg aaagcagaaa aagaagccgc agagatgcag
     1201 gcggcggcta tcgttaagtt agccgaagct acacgtaaaa agggtctggc ggaagcagaa
     1261 gcacaacgtg cgctgaacga tgctatcaac gtactttctg atgaacaaac cagccttaaa
     1321 ttcaaactgg ccttgttgca ggcgctacct gcggtaatag aaaaatccgt tgagccgatg
     1381 aaatctattg acggtatcaa gattattcag gtcgatggtc tgaatcgtgg cagcgctgcg
     1441 ggtgatgcaa acacgggtaa tgtggggggc ggaaacctgg cggaacaagc attatcagcc
     1501 gctctctctt accgcacaca ggcaccgctg attgactcct tgctcaatga aattggcgtt
     1561 tcaggcggct cactggcggc attgacttca cccttaacct caacaactcc cgtcgccgaa
     1621 aacgtagaat aaattttcag ctatgaacgt ccctggcaca aaaagccggg gattttttat
     1681 atctgcgttc cgctaaaaac tgcaaatgat caggtcgttg caacgttttg cgtgaccgct
     1741 cggggaaggc aaaactgcct ctgggaaagc gttgcgcgag gtccggcgct catcaacaat
     1801 cggggagtca gcaaagggct gaaacgggaa agcccctccc gaggaagggg ccttacagaa
     1861 ggaaagggtt atgatgaagc tcgtcatcat actgattgtg ttgttactcg taagtttcgc
     1921 agcttattaa cagccaatca gaggggggag aaatcctccc tcacccttgt tcctttactt
     1981 taggttgaaa aaaaatcagc gtcaagaagg tttcattaac acatatccct agcccaaaaa
     2041 gccggggatt ttttatatct gcgttccgct aaaaggtgca aatgctcagg acgttgcagc
     2101 gttttgcgtg accgctcggg gaaggcaaaa ctgcttcagg gaaagcgttg cgcggggtcc
     2161 ggcgctcatc aacaatcggg gagtcagcaa ggggctgaaa cgggaaagcc cctcccgagg
     2221 aaggggcctt atagaaggaa agggttatga tgaagttcgt catcatactg gttgtgttgt
     2281 tactgttaag tttcccgact tactaacaac tgatcagagg ggggagaaat cctcccttac
     2341 ccttgttcct ttactttagg ttgaaaaaac aacagcgtca ataggcctgc ctgctacgaa
     2401 gcgagatctg tgaaccgctt tccggttagc cttttttatc ctgttggatc ttcttgatga
     2461 tgttagtggt cgagcaaccg tcttcgaagt tgagcaccag cacttcgccg ccgttggccc
     2521 agacttcttt actcccggcg atctcttctg gtttatagtc gccgcccttc accagtaaat
     2581 ctggcaggat cccggcgatc aagcgctgcg gcgtgtcttc ttcaaacgac accacccagt
     2641 cgaccgcttc cagtgcgccc agcacaatca tacgctgttc gagcgggtta acggggcggg
     2701 aatccccttt cagccgtttg gtggaggcat cgctgttcac agcgacaatc agacggtcac
     2761 ccagtttgcg agcatttgcc agataggaga cgtgcccggc atgcaggatg tcaaagacac
     2821 cgttggtcat taccaccttt tcgccgcgtt tacgcgctgc cgctacggcc agcttcagtt
     2881 cctcttcggt catcacgcca aagccggtat ctgcgcgccc acgcactgca ttttccagct
     2941 cgatcggcga aaccgtggag gttcccagtt tgccgaccac cacgccagcc gccgcattgg
     3001 caaagaagca ggcttcttcc agcgaattac ccgctgccag cgttgccgcc aggacgccaa
     3061 tcaccgtgtc gcccgcaccg gtaacgtcat acacttcctg cgcctgggtt ggcatatgca
     3121 gcggcgcttt acccggttgc agcagcgaca taccctgttc ggaacgggtc actaacagag
     3181 ccgagagttc gtaatcggca atcagtttca tgccgcgctc aacaatctct tcttcggtct
     3241 tacatttacc gacaacagct tcaaattccg agagattcgg cgttaacagc gtagcgccgc
     3301 ggtagcgctc aaaatcggta ccttttggat caatcagcac cggaacgccc gctttacgcg
     3361 ccagttggat catctgctgt acgcttgcca gcgcaccttt ggcgtagtca gaaagcacca
     3421 gcgcgccaat cgaactcagc gcctgattaa tccgctcgtg cagcggctgc ggatcaacgc
     3481 cttcgaaacc ttcttcgaaa tccagacgga tcagctgttg gttgcgggaa agtacccgta
     3541 atttggtgat ggtcggatgc gtcggtacag aaacgaagtc gcatttgacg ttgacgtcgg
     3601 ccagagattt actcagcgcg cgcgctgcat cgtcaatgcc cgtcaacccg accaggcgtg
     3661 cattagcacc gagagaagcg atattcatcg ccacgttagc cgcgccgccc ggacgttctt
     3721 cgatggtatt cactttaacc acgggcaccg gcgcttccgg cgagatacgg ctggtgggac
     3781 cgtaccagta acgatccagc attacatcac caaccaccat cactcctgca cgttcaaact
     3841 ctgacagcgt tactttcatt cctgtctcct gagagattca aaatttgcgc gcgataatac
     3901 catacttcat tcttccacca gccacttctg ccagcttgcc cgcaccagat cacgctctgc
     3961 ggtgaagcaa tcctccgaca catggcccgg caattcctgt aatgccagat gatgaagttc
     4021 atcgcgcagc gtcgtgtaag cacgggtcag cgccatcgct tcctgctctt ccataatgtc
     4081 gttttgcgcc agcagctcca gaatacgcac gttgtctgac cagcgcgtta acttcggttt
     4141 ttcatgagcg tagcgcaaca ccagatattg ggtaataaat tcgatatcgg taattccgcc
     4201 ttcatcggct ttgatatcaa agcgattacg atgtttattg ccgagatgag cgcgcatttt
     4261 ctcgcgcatt tcccgcactt ccgtttgcag agttttacct tcacgcggca gcatcataat
     4321 ctcgcgacgc actgcgtcaa agtgcgcggt gagctgcgga tcgccgtaca ctacacgcgc
     4381 acgcaccagc gcctgatgct cccacgtcca ggcctcgttt ttctgataat cagcaaatgc
     4441 ttctgcggat gtcaccagca ttcccgccgc cccggacgga cgcagtcgtg catccacttc
     4501 atacaaaatg ccggaagagg ttcgcgtatt gaacagatgc ataatgcgtt gcgccagacg
     4561 cagataaaac tgtcgcccgt cgatttcccg ctcgccgtca gtcatcgcat ccattgggca
     4621 atcatggagg aagatcaggt caagatcgga actgtagcct aactcccagc cgcccagctt
     4681 gccgtagccg accaccgcaa aaccacggcc ttcgcgatcg ttgaggtgat ttggcttacc
     4741 gtagcgggcc accatttgaa cccacgcctg ctgaacgacg gcatctatca tagcctctgc
     4801 cagccaggtt aagtgatcgc tcactttcat caccggtagc gtaccagcga tatccgctgc
     4861 ggcgatgcgt aacagctgcg cctgtttgaa ctgacgcagc gcctcaagct gttgctcttc
     4921 gtcatcttcc ggcacgcgca gcaaatactg gcgcaactca tcgcggtagg catcggtcgc
     4981 cgtcggctgg taaagagtgt ttggatcgag caattcatcc agcaataatg gataacgcgc
     5041 cagctggctg gcaatcatcg gcgatgcggc acacagagaa atcaaatgtt taagcgccgc
     5101 agggaattca ctgagcaatt ctaaataggt ggtgcgggta acaatcccca ccagcaaggc
     5161 ggtaatgcgc gacagcgtaa cggcagcgtc ttcacgcgca cagacatcac ttagcagatg
     5221 tggcatcaga tggtcgagca cctgacgtcc tcgcggcccg atagtacgct tatccagctc
     5281 tttgcggaaa tcagcaatca gcgttaggac ctgtttgcga tcatcctcgc taagatgcgc
     5341 cagcactggc gtagtgtcat cttcctgcaa cgcatcctgc cacagctcac gccactgttc
     5401 cgacagcgac tcttcctgag tttcactttc gtcgtcgcca atcaattcat taaacacccg
     5461 gcgcacattg gtcatatgtg cggtcagcgc cccggtcagt tgcggccagt cagcaaagtc
     5521 catcgcccac gccagccgcg cacggttaag ctcatcagaa ggaagcgttt gggtttgttc
     5581 gtcgttaatg ctttgcagca ggttttccag acgccgcagg aacagatatg ccactcgcaa
     5641 ttgttcagca tcgttttcag aaagcagatg cagcgcggca atgacgctga gcgttggcag
     5701 taaagagcgc gactgcagcg acggttcgcg cccaccgcga atgagctgga acacctgaac
     5761 gataaattca atttcgcgaa tgccgcctgc gccgagtttg atattgtcgg tcaaaccacg
     5821 tcgacgcact tcacgggcaa tcatcccttt catgttgcgc agcgactgaa tcacgctgaa
     5881 atcgatgtaa cgacggaaaa caaacgggcg cagcatcgca cgcaactcgt tagcatagac
     5941 gccttcgcta tcgcccataa tccgcgcctt gaccatcgcg taacgctccc agtcgcgccc
     6001 ctgctcctgg taataatcct ccaacgcggc aaagctcagc accagcgggc cactttcgcc
     6061 aaacggacgc agccgcatat ccacgcgata gacgaagcca tcctgcgttg gttgatccaa
     6121 cactttaatc agccgctgcc ccatgcgggt aaaaaactgc gcgttatcca gttcccggcg
     6181 tccgccctgc gtacaaccat gttccggcca ggcaaaaatc agatcgatat ctgaggagaa
     6241 attcagttcc ccaccgccca gcttacccat gcctaaaatc agcagcggtt gcgcttcgcc
     6301 ctgcgcattg cacggcgttc cccactcgcg gcagcaagcg tcatacagcc agtcacgcgc
     6361 ggcgacaatc agcgtctccg ccagatggct gagctgctgc aatatgctct cttcagtaac
     6421 caaagccagc gtttgcgccc aggcgatgcg caccataatg cgccgccgga atagccgcag
     6481 ctcgcgcatt aacccggctt cgtcactcac attgctgagc gcctcctgca accatgccgc
     6541 gtaatgctgc cattcatcag cctgcggcga ttggctttcc agttccgtca gccactctgg
     6601 atgcgcaatc acgctgtcct gcacaaaatc actgaaagta agtactgact tcgcctgtgc
     6661 gctaagtgat ttctcggcta aaggctctgg cagccgctca acaacggtct gccagtactg
     6721 ctgtaacggt gaagagagcg gcttcataag cgattttatc cttgcctgat taacgttttc
     6781 cgctgtgcaa ccagaacggt tcctgattgt ttgcctcatt acggaaatgt tcaatttcaa
     6841 tgcgttgccc ggtcgcaata gcgtgacgca gcccctgcca gttctccagc caggcttgcg
     6901 cgacgacagg atcatagtaa cccgccagca acagtattga gtcaatatca cgcgtcagac
     6961 gtggcaactg gtcacggtag cgatcgccca acggctggca gaaaacgctt ttcagttcag
     7021 cggcatggcg ggaaagatgg atatcggcaa agcgtttgaa ggaatcgctc attttactct
     7081 gcgctttggc atctaaaaac ggctgccagg ctttgcttac cagccattcg gtcaacgcca
     7141 gcttcgccat tgccgttttg gtagagtaga ccgccgtcac ggcagaaacc gcagaagcga
     7201 tggtcgcttc gcattgagtc agcaaatcgc gtaagtgagt gctcgctttg cgcggcacaa
     7261 taccaccgaa cagcatcagt gtatgacgga ccagaccaat ggctgccagc acctgttctt
     7321 tcgccgcatc gttgccgcgt acccacagtt cttcatgata ctgccattgc gctaacgcca
     7381 gctcgagcgc cgcttccagc ccctgttcca catcggcttt tgccgcaaca tgcaaaatgg
     7441 tggtcggttt gatttcacgc gccggattgc cctgcgccag atgatagcca cgcgccgctt
     7501 tgctcaggct gccctggcgt aatccggttt gcgataccag ttggttcgcc agtttcagca
     7561 ccgcgcgcgt gtcgccgcta agcagttcca gttccagctc acagataggt tcagcaaatt
     7621 cccccgcttt cacctccccc tgatcgagag cgatttcaat tcggctgtca tcgaccgcca
     7681 ccagccattt ttcgcgataa aaatcggtgc tgaacagcgg ttgtacgcgg gaagcgagat
     7741 cggcgggcaa ttcgccgttc ggccagactt ccgtcggtaa ctgcgccagg tcgagcgtcg
     7801 gttcgctcaa cgccacgtta tattccgggc gctggtgtaa gccgcctgtc actcttcctg
     7861 caactttcat ggtcatctca tagcgaccgt tttcgccacg aatacgtaag cccatatcgt
     7921 gcccacgcag ccagttatcc ggcgtttcgt agtaaatatt cagcaactgc acggggtcat
     7981 ggtgctcgcc gcccagcgta ttgagatggt cacgcaacgc ctcaacggca ctgtgattaa
     8041 caataaactt taattcgatt tcctgagcca tggcctttac ttatcggtta tgtcacataa
     8101 gtgacgatga acggcgaact taatgcgatc ttttttgtca gtagatagta ttttgcgcca
     8161 aattgccatg caacgggcaa tttgacgggc gtaaaagttt gaagcagtgg caagacctga
     8221 cacagaggat tccgattgat gtcgaatgct ttgcgtagcg acactgatgc cactactatc
     8281 gttccacttt ccatgacaat aacgacagcc tgatgccaaa attacgcctg atcggattaa
     8341 ctttactcgc acttagcgcc actgccgtct cacacgctga agaaacgcgc tatgtttctg
     8401 atgaactgaa tacctgggtc cgtagcggtc cgggagatca ttatcgcctc gtgggcacgg
     8461 ttaacgccgg cgaggaagtg accttattac aaactgacgc caacaccaat tatgcccagg
     8521 tgaaagacag ctctggccgt accgcctgga tcccgttgaa acaacttagc actgagccaa
     8581 gcctgcgctc ccgtgtgcca gatctggaaa atcaggtcaa aaccctgacc gataaactca
     8641 ccaatatcga taacacctgg aatcagcgca ccgcagaaat gcagcaaaaa gtggcgcaga
     8701 gcgacagcgt gatcaacgga ttaaaagaag aaaatcagaa attgaaaaac gagctgattg
     8761 tcgcgcagaa aaaggtcgat gccgccagcg tacagctgga tgacaaacag cgcaccatca
     8821 tcatgcaatg gtttatgtat ggcggtggcg tgctggggct tggcttgctg ctcggtctgg
     8881 tactgccaca cctgatccca acgcgcaaac gcaaagagcg ctggatgaac taaatcgcct
     8941 tcttcgttgc actgtcttat tattaggaat tgtgtatttg acgaagggat gatggcgtga
     9001 agatttatct ggtcggtggt gctgttcggg atgcattgtt agggctaccg gtcaaagaca
     9061 gagattgggt ggtggtcggc agtacgccac aggagatgct cgacgcgggc taccagcagg
     9121 taggccgcga ttttcctgtg tttctgcatc cgcaaacgca tgaagagtat gcgctggcac
     9181 gtaccgaacg gaaatccggt tccggttaca ccggttttac ttgctatgcc gcaccggatg
     9241 tcacgctgga agatgatctt aagcgtcgcg atctgaccat taatgcgctg gcccaggacg
     9301 ataacggcga gattatcgac ccgtacaacg gtctgggcga tctgcaaaat cgtctgttgc
     9361 gccatgtttc ccccgctttt ggcgaagatc cgttacgcgt tctgcgcgtg gcgcgttttg
     9421 ctgcgcgtta tgcccacctc ggttttcgta ttgccgatga aactctgacg ctgatgcgcg
     9481 agatgaccca tgcgggtgaa ctggaacacc tgacgcctga acgggtatgg aaagagacgg
     9541 aaagcgccct caccacccgc aatccccagg tgttcttcca ggtactgcgc gattgcggtg
     9601 cacttcgcgt tttattcccg gaaattgacg ccctgtttgg cgttccggcc cctgccaggt
     9661 ggcatccgga aatcgacacc ggtattcata ccttaatgac gctctcaatg gcggcgatgc
     9721 tgagtccgca ggttgatgtc cgtttcgcaa ctttatgcca cgatctcggt aaaggactga
     9781 cgccgccaga actttggccg cgtcatcatg ggcatggccc ggcgggtgtt aagttagtgg
     9841 aacaactatg ccagcgtctg cgcgtgccaa atgaaattcg cgatttagcc agactggtgg
     9901 ctgagtttca cgatctcatc cacaccttcc caatgctgaa cccaaaaacc atcgtcaaat
     9961 tatttgattc catcgatgcc tggcgtaaac cgcagcgtgt cgagcaactg gcgctgacca
    10021 gcgaggctga cgtacgcggc agaaccggtt ttgaatcagc ggactacccg caaggccgtt
    10081 ggttgcgcga agcctgggaa gtggcgcagt cagtgccgac aaaagcggtc gttgaagcgg
    10141 gatttaaagg tgtggagatt cgcgaggagc tgacccgacg gcggattgcg gcggtagcca
    10201 gttggaagga acaacgttgc ccaaagcctg actgagtata aaactaaacg ttaacacgaa
    10261 ccatcccctc gccccttcgg ggagagggtg aggggaacag accagcaccg gtgcgaacaa
    10321 tcacccccac cccggccctc tccctacaga gcgagggaga aaaccaggcc tgctcccgaa
    10381 ccttttctca atcaaaagaa cacgacgtac accgcagccg ccacaataaa gcgataaatg
    10441 gcgaacggga taaacgaaat gcgcttaatc aattgcagga aggttttaat cgctatcagc
    10501 gccaccacaa aagcggtgat aaacccaacg gcaaacatcg ggatatcgcc ggttgtcagg
    10561 aagccccagc ttttgtagag atcgagcgcc gttgcgccca tcatcatcgg taccgccagc
    10621 aggaacgaga actcggaagc agcgtaacgg ctcacgccca tcagcatccc acctgaaatg
    10681 gtggccccgg aacgggagaa acccggccac agcgccagac actggaaaca gccaatcata
    10741 aacgcctgac gataggtcat atcatcaaga cccggcgcac gcggctcttt cggcttcagg
    10801 cattcggcgg caatcagcaa caaaccgcca acgaccagtg catacatcac atttatcggg
    10861 ttaaacaatg acttaatcgt gtcgtggaac aacagcccca gtaccaccgc cggaatcatc
    10921 cccagcaaaa tgtggatcag cgttaaacga cctttgcttt ctccttcgtg ctgcaacggg
    10981 cggccaaagt ggatgccaat caggccaaac agacgccgcc agaacatcac tactaccgcc
    11041 agaattgatc ctaactggat cacaacttca aaggttttcg ccgtgtcgcc ctcgaacccc
    11101 aacaagtgac cgacaataat catatggccc gtgctggata ccggcagaaa ttctgtcaat
    11161 ccttcgacca cacccaatat tgccgctatc agcagcgagt gcatatcgct catcaataaa
    11221 cccctaaatt attaaaatgt accgcttgtc cggactactg cagtaagacc aggttataac
    11281 cgtttggttt aacagctgta aaattaatta ttttctttca gattattgcc acgctcaatg
    11341 attacaccaa cattcgccgc ccgcgccact gcgcctggct tgctgagttt gatgcgcacc
    11401 cacggcgagt tgaagcgtgc taacagcagc tccgccacct cttcagccac gcgttccacc
    11461 agcgcaaaac gcgccccctc gacgtggctg accaccgttt ctgcaatgtc agcgtaactg
    11521 aggcaatccg ccacatcatc acttttcgcc gctttacggt tatcccatgc catttcgata
    11581 tcgaacacta acttctgttc gatggtctgt tcccagtcgt aaacaccaat agtggtgatt
    11641 accgaaagtt gctctataaa tacaatatcc atcacgtcct gcctgctttt tggctaaccg
    11701 gataccactt ccggcgaaat gtgcgtatta tccacagatt catcgttgaa cacgaatttt
    11761 caaaacggaa cagcttatga gtgcaatcgc gcctggaatg atcctcatcg cgtacctctg
    11821 cggctccatt tccagtgcca ttctggtttg ccgcttgtgt gggctgcccg atccgcgaac
    11881 cagcggctcc ggcaatccag gcgcaaccaa tgtgttacgt atcggtggca agggagcagc
    11941 cgtagcagta ctgattttcg acgttctgaa aggaatgttg cccgtctggg gcgcgtatga
    12001 attaggtgtc agccccttct ggctaggctt aattgccatc gccgcctgtc ttggacacat
    12061 ctggcccgtt ttcttcggat ttaaaggagg aaaaggcgtt gctaccgctt ttggtgccat
    12121 cgcacccatt ggctgggatc tcaccggagt aatggcggga acctggttac tgaccgtgct
    12181 attgagcgga tactcgtcgc tgggagcgat tgtcagtgca ctgattgctc cgttttatgt
    12241 ctggtggttt aagccacaat tcaccttccc agtttcgatg ctctcttgcc tgatcctgct
    12301 gcgtcatcat gacaacatcc agcgtctgtg gcgtcgtcag gagacaaaaa tctggacgaa
    12361 attcaaaaga aagcgcgaaa aggatcccga gtgatttctg gtggatctac atgacctgat
    12421 agccttcatc gggcttgccc agccgttgct ggcaccatgc cgccagaaat tccacgcaga
    12481 cacgtaattt catgctgcga tagagcggct cccggtaaac agcccagata ttggcgcttt
    12541 gtgcatactc cggcaatact tgcaccagtt tgccactctc cagaaacggc aacacatccc
    12601 actcggaacg cagcataatc cctttgccct ccagcgccca ttgcaacact atctcgccgc
    12661 tattggagga aagatgcccg ctaaccttca ccgatttttt ctcctgaccg ttccccaact
    12721 cccatattcc gtgggtcata tcgcgctctt tggtcaccag acagtcatga cgacttaatt
    12781 cctgtaatga ttgtggctgc ggatattttt gcagatactc aggtgctgcg cataatattc
    12841 ttttattttt cgttaacaga tgcgcaatat aataatcagg aatttcgtca ttaatacgaa
    12901 tatccagatc aatattatcc tgcactaaat caatttgccg atcgaacaat tcaaaatgca
    12961 cctgtaactc aggataattg cgcataagtt cggtaatggc tggcgcaata tggctgcgcc
    13021 caaaaccaaa actgcaacca atacgaatca tcccctccgg gcgcgttttg atttgcgtga
    13081 cgtcatcgac ca
//
LOCUS       DAJVUK010000120        13087 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.120, whole genome shotgun sequence.
ACCESSION   DAJVUK010000120 DAJVUK010000000
VERSION     DAJVUK010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13087
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.120"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            176..1150
                     /gene="cysB"
                     /locus_tag="OQQ57_003101"
     CDS             176..1150
                     /gene="cysB"
                     /locus_tag="OQQ57_003101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HCS1957775.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
     gene            1445..1609
                     /locus_tag="OQQ57_003102"
     CDS             1445..1609
                     /locus_tag="OQQ57_003102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HCS1957776.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
                     VALLIWKVWG"
     gene            1612..1779
                     /locus_tag="OQQ57_003103"
     CDS             1612..1779
                     /locus_tag="OQQ57_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957777.1"
                     /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI
                     ELFAEDDQPKQ"
     gene            1893..1988
                     /locus_tag="OQQ57_003104"
     CDS             1893..1988
                     /locus_tag="OQQ57_003104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957778.1"
                     /translation="MINTNMKYWSWMGAFSLSMLFWAELLWIITH"
     gene            2152..4827
                     /gene="acnA"
                     /locus_tag="OQQ57_003105"
                     /pseudo
     CDS             2152..4827
                     /gene="acnA"
                     /locus_tag="OQQ57_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415792.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
     gene            complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="OQQ57_003106"
     CDS             complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="OQQ57_003106"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HCS1957779.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            5651..6415
                     /gene="pgpB"
                     /locus_tag="OQQ57_003107"
     CDS             5651..6415
                     /gene="pgpB"
                     /locus_tag="OQQ57_003107"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HCS1957780.1"
                     /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTLTIAILLLWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
     gene            6564..6872
                     /gene="lapA"
                     /locus_tag="OQQ57_003108"
     CDS             6564..6872
                     /gene="lapA"
                     /locus_tag="OQQ57_003108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HCS1957781.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
                     "
     gene            6879..8048
                     /gene="lapB"
                     /locus_tag="OQQ57_003109"
     CDS             6879..8048
                     /gene="lapB"
                     /locus_tag="OQQ57_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HCS1957782.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            8241..8978
                     /gene="pyrF"
                     /locus_tag="OQQ57_003110"
     CDS             8241..8978
                     /gene="pyrF"
                     /locus_tag="OQQ57_003110"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HCS1957783.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYM
                     VIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            8978..9304
                     /gene="yciH"
                     /locus_tag="OQQ57_003111"
     CDS             8978..9304
                     /gene="yciH"
                     /locus_tag="OQQ57_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HCS1957784.1"
                     /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
     gene            complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="OQQ57_003112"
     CDS             complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="OQQ57_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HCS1957785.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(9917..10666)
                     /locus_tag="OQQ57_003113"
     CDS             complement(9917..10666)
                     /locus_tag="OQQ57_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1957786.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEVIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
     gene            complement(10756..10929)
                     /locus_tag="OQQ57_003114"
     CDS             complement(10756..10929)
                     /locus_tag="OQQ57_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957787.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="OQQ57_003115"
     CDS             complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="OQQ57_003115"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HCS1957788.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKSEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF
                     CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER
                     GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT
                     IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY
                     SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE
                     DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA"
BASE COUNT         3328 a         3082 c         3292 g         3385 t
ORIGIN      
        1 tcgcgaaagc ggcccttttt tattgcatat tattttttct tcacacctat acactaaggc
       61 tataaatgat atagtggtta tagttagcac cttttttatt attaaatcgt attagtcacc
      121 cgccaggtgt gacgaaaaaa cgatgttctg atggcgtcta agtggatggt ttaacatgaa
      181 attacaacaa cttcgctata ttgttgaggt ggtcaatcat aacctgaatg tctcatcaac
      241 agcggaagga ctttacacat cacaacccgg gatcagtaaa caagtcagaa tgctggaaga
      301 cgagctaggc attcaaattt tttcccgaag cggcaagcac ctgacgcagg taacgccagc
      361 agggcaagaa ataattcgta tcgctcgcga agtcctgtcg aaagtcgatg ccataaaatc
      421 ggttgccgga gagcacacct ggccggataa aggctcactg tatatcgcca ccacgcatac
      481 ccaggcacgc tacgcattac caaacgtcat caaaggcttt attgagcgtt atcctcgcgt
      541 ttctttgcat atgcaccagg gctcgccgac acaaattgct gatgccgtct ctaaaggcaa
      601 tgccgatttc gctatcgcca cagaagcgct gcatctgtat gaagatttag tgatgttacc
      661 gtgctaccac tggaatcggg ctattgtagt cactccggat cacccgctgg caggcaaaaa
      721 agccattacc attgaagaac tggcgcaata tccgttggtg acatatacct tcggctttac
      781 cggacgttca gaactggata ctgcctttaa ccgcgcaggg ttaacgccgc gtatcgtttt
      841 cacggcaacg gatgctgacg tcattaaaac ttacgtccgg ttagggctgg gggtaggggt
      901 cattgccagc atggcggtgg atccggtcgc cgatccggac cttgtgcgcg ttgatgctca
      961 cgatatcttc agccacagta caaccaaaat tggttttcgc cgtagtactt ttttgcgcag
     1021 ttatatgtat gatttcattc agcgttttgc accgcattta acgcgtgatg tcgttgatgc
     1081 ggctgtcgca ttgcgctcta atgaagaaat tgaggtcatg tttaaagata taaaactgcc
     1141 ggaaaaataa tttcttgcgt tattttcggc accttttatg tagcgaaggt gccggaatat
     1201 attctctttt gttacttatt tttataccgt gcacaatatt tttatccctc atatttatag
     1261 ggtaaattac ctgtaaagta gtgtctaatt acccgcctcg caaattccag ttttcaaata
     1321 tctatttcag gtcaaaagat tgaattattc actggagacg attcgtaaat tcgctggatt
     1381 tttgactaaa gtttctttag gatttgtctc atcgtatgat taattacacc aatcgttcaa
     1441 cgtcttgctg ataagtgatg gcgattatat gaggttagca atgccttctg gaaatcagga
     1501 accccgccgc gatcctgaat taaaacgtaa agcctggctg gcggtttttc ttggttctgc
     1561 acttttctgg gtggttgtcg cactgctgat ttggaaagtg tggggataac tatggtcggt
     1621 caggagcaac tggagtcgtc accattatgc cagcatagtg acaatgaaac agaaacgaaa
     1681 cgggaatgtt ccgtcgttat tccagacgac tggcaactaa catcgcagca gcaagccttt
     1741 atagaactgt ttgctgaaga tgatcagccg aaacaataat tatcatcatt cttattaccc
     1801 atttttaatg aattaaaggg cttttaatac accgcagcaa taacagcttg agttatctca
     1861 acacaaaata ataaccgtta agggtgtagc ctatgatcaa cacaaatatg aaatattggt
     1921 cctggatggg cgcgttttct ctgtcgatgc tcttctgggc cgaactcctc tggatcatta
     1981 ctcactgatc cttgaccccg ctgcggcggg gttgtcattt gctttgccac aaggtttctc
     2041 ctcttttatc aatttgggtt gttatcaaat cgttacgcga tgtttgtgtt atctttaata
     2101 ttcaccctga agagaatcag ggcttcgcaa ccctgtcatt aaggaggagc tatgtcgtca
     2161 accctacgag aagccagtaa ggacacgttg caggccaaag ataaaactta ccactactac
     2221 agcctgccgc ttgctgctaa atcactgggc gatatcaccc gtctacccaa gtcactcaaa
     2281 gttttgctcg aaaacctgct gcgctggcag gatggtaact cggttaccga agaggatatc
     2341 cacgcgctgg caggatggct gaaaaatgcc catgctgacc gtgaaattgc ctaccgcccg
     2401 gcaagggtgc tgatgtagga ctttaccggc gtacctgccg ttgttgatct ggcggcaatg
     2461 cgcgaagcgg ttaaacgcct cggcggcgat actgcaaagg ttaacccgct ctcaccggtc
     2521 gacctggtca ttgaccactc ggtgaccgtc gatcgttttg gtgatgatga ggcatttgaa
     2581 gaaaacgtac gcctggaaat ggagcgcaac cacgaacgtt atgtgttcct gaaatgggga
     2641 aagcaagcgt tcagtcggtt tagcgtcgtg ccgccaggca caggcatttg ccatcaggtt
     2701 aacctcgaat atctcggcaa agcagtgtgg agtgaattgc aggacggtga atggattgct
     2761 tatccggata cactcgttgg tactgactcg cacaccacta tgatcaacgg ccttggcgtg
     2821 ctggggtggg gcgtgggtgg gatcgaagca gaagccgcaa tgttaggcca gccggtttcc
     2881 atgcttatcc cggacgtagt gggctttaaa cttaccggta aattacgtga aggtattacc
     2941 gccacagacc tggttctcac tgttacccaa atgctgcgca aacatggcgt ggtggggaaa
     3001 ttcgtcgaat tttatggtga tggtctggat tcactaccgc tggcggatcg cgccaccatt
     3061 gccaatatgt cgccagaata tggtgccacc tgtggcttct tcccaatcga tgctgtaacc
     3121 ctcgattaca tgcgtttaag cgggcgcagc gaagatcagg ttgagttggt cgaaaaatat
     3181 gccaaagcgc agggcatgtg gcgtaacccg ggcgatgaac cgatttttac cagtacgtta
     3241 gaactggata tgaatgacgt tgaagcgagc ctggcagggc caaaacgccc acaggatcgc
     3301 gttgcactgc ccgatgtacc aaaagcattt gccgccagta acgaactgga agtgaatgcc
     3361 acgcataaag atcgccagcc ggtcgattat gttatgaacg gacatcagta tcagttacct
     3421 gatggcgctg tggtcattgc tgcgataacc tcgtgcacca acacctctaa cccaagtgtg
     3481 ctgatggccg caggcttgct ggcgaaaaaa gccgtaactc tgggcctcaa gcggcaaccg
     3541 tgggtcaaag cgtcgctggc accgggttcg aaagtcgttt ctgattatct ggcaaaagcg
     3601 aaactgacac cgtatctcga cgaactgggg tttaaccttg tgggatacgg ttgtaccacc
     3661 tgtattggta actctgggcc gctgcccgat cctatcgaaa cggcaatcaa aaaaggcgat
     3721 ttaaccgtcg gtgcggtgct gtccggcaac cgtaactttg aaggccgtat ccatccgctg
     3781 gttaaaacta actggctggc ctcgccgccg ctggtggttg cctatgcgct ggcgggaaat
     3841 atgaatatca acctggctgc tgagcctatt ggtcatgatc gtaaaggcga cccggtttat
     3901 ctgaaagata tctggccatc ggcacaggaa attgcccgtg cggtagaaca agtctccaca
     3961 gaaatgttcc gtaaagagta cgcagaagtt tttgaaggca cagcagagtg gaaggaaatt
     4021 aacgtcacac gatccgatac ctacggttgg caggaggatt caacctatat tcgcttatcg
     4081 cctttctttg atgaaatgca ggcaacacca gcacctgtgg aagatattca cggtgcgcgg
     4141 atcctcgcaa tgctggggga ttcagtcacc actgaccata tctctccggc gggcagtatt
     4201 aagcccgaca gcccggcggg tcgatatcta caaggtcggg gtgttgagcg aaaagacttt
     4261 aactcctacg gttcgcggcg tggtaaccat gaagtgatga tgcgcggcac cttcgccaat
     4321 attcgcatcc gtaatgaaat ggtgcctggc gttgaagggg ggatgacgcg gcatttacct
     4381 gacagcgatg ttgtctctat ctatgatgcc gcgatgcgct ataagcagga gcaaacgccg
     4441 ctggcggtga ttgccgggaa agagtatgga tcaggctcca gccgtgactg gacggcaaaa
     4501 ggtccgcgtc tgcttggtat tcgtgtggtg attgccgaat cgtttgaacg aattcaccgt
     4561 tcgaatttaa ttggcatggg catcttgccg ctggaatttc cgcaaggcgt gacgcgtaaa
     4621 acgttagggc taaccgggga agagaagatt gatattggcg acctgcaaaa tctacaaccc
     4681 ggcgcgacgg ttccggtgac gcttacgcgc gcggatggta gccaggaagt cgtaccctgc
     4741 cgttgtcgta tcgacaccgc gacggagttg acctactacc agaacgacgg cattttgcat
     4801 tatgtcattc gtaatatgct gaagtaacaa gtatttgctt gccggttatt ttgcttccgg
     4861 caagcaaatt aattccacaa tgcgagaggg ttatttgttc agcaaatgac ccattttctc
     4921 ggctttggta tcgagataat gttcgttatt ggggttacga cctacaatca atggtacgcg
     4981 ttcaacaata ttaatccctg cttcggtcag aatttcgact tttttcgggt tattggttaa
     5041 caagcggact tcattgacgc caaggagttt gaacatatca gcgcaaagag tgaagtcgcg
     5101 ctcatcagcg gcgaagccta actggtggtt agcctctacg gtatcgtaac cttgatcctg
     5161 cagtgcgtaa gcgcggattt tattcagcag accaatgtta cgaccttcct gacggtgata
     5221 cagcaaaata ccacggcctt cctcggcaat ttgcgtcaat gccgcttcga gctggaagcc
     5281 acaatcgcag cgcaagctga acagggcgtc accggtcaga cattcggaat ggacgcgcgc
     5341 aagtaccggg gtatgcccgg aaatatcgcc atagactagc gcgacatgat cgtgtccggt
     5401 tgccagttct tcaaatccca ccatcaggaa atcgccccat ggggttggca gtttggcttc
     5461 tgccacacgt ttaagctgca tgaaattctc cagataatgc tggttctgta ttggcttatt
     5521 ttgccataac gagaaggggt tcacctaatc acgacgcgtc gatcgttcac ggaatggcac
     5581 aaatctgtca atttttcctg gaactggcgt tttcagttat gattgtggga cttatcaaaa
     5641 aggagaggcc atgcgttcga ttgccagacg taccgcagtg ggagctgcac tattgcttgt
     5701 catgccagta gccgtatgga tttctggctg gcgttggcaa cctggagaac aaagttggct
     5761 actaaaagcg gctttttggg ttactgaaac tgtcacccag ccctggggcg tcattacaca
     5821 tttgatttta ttcggctggt ttctctggtg tctgcgtttt cgcattaagg ctgcctttgt
     5881 attatttgcc attctggcgg ccgcaatcct tgtgggacaa ggcgttaaat cctggatcaa
     5941 agacaaagtc caggaaccac gaccttttgt tatctggctg gaaaaaacac atcatattcc
     6001 ggttgatgag ttctacactt taaagcgagc agaacgcgga aatctagtga aagaacagtt
     6061 ggctgaagag aaaaatatcc cacaatattt gcgttcacac tggcagaaag agacggggtt
     6121 tgcctttcct tccggtcaca cgatgtttgc tgccagttgg gcactgctgg ccgttggttt
     6181 gctgtggccg cgtcggcgaa cgttaaccat tgctatcttg ctgctctggg caacgggagt
     6241 catgggaagc cgcctgctgc tcgggatgca ttggccacgc gatctggtag tagctacatt
     6301 gatttcgtgg gcgctggtgg cggtggcaac gtggcttgcg caacgaattt gtgggccatt
     6361 aacaccacct gcggaagaaa atcgcgaaat agcgcaacga gaacaagaaa gttaacgctg
     6421 gttgattttc cgaatttagc ccttaaatca tcaacaatgc gcgtggatgc catttcgcag
     6481 acggcgcgaa aatggtactt taaagggcta ttgcggtaag ttgaccataa tttattcgct
     6541 ctaaccacat aacgggaagt aatgtgaaat atttactcat tttcttactg gtgttagcga
     6601 tcttcgtgat ttcggtcacg ttgggtgcgc agaacgatca acaggtgacg tttaattatc
     6661 tgttagcgca aggggagtac cgtatttcca cattgctggc ggtattgttt gctgcggggt
     6721 ttgctatcgg ttggttgatt tgtggcctgt tctggctgcg agttcgtgtt tccctggcgc
     6781 gcgctgaacg taaaataaag cgactggaaa accagctttc acccgcgact gacgtggctg
     6841 tagtgccgca ctcgtcagcg gcgaaggaat aactttctat gctggagttg ttgtttctgc
     6901 ttttgcctgt agccgctgcc tatggctggt atatgggccg cagaagtgcg caacaaaaca
     6961 agcaagatga agccaaccgc ttgtcgcgtg attacgtagc gggggttaac ttcctgctta
     7021 gtaatcaaca ggataaagcg gtagacctgt ttctcgatat gcttaaagag gatacaggca
     7081 ccgttgaagc ccaccttacg ctcggaaacc tgttccgttc gcgtggcgaa gttgatcgcg
     7141 ctattcgcat ccatcagacc ctaatggaaa gcgcctcgct gacctatgaa cagcgtctgt
     7201 tggcgattca acaactaggg cgtgattaca tggccgccgg gttatacgac cgcgcggaag
     7261 acatgttcaa tcagctgacc gatgaaactg acttccgcat tggcgctctg caacagttgc
     7321 tacaaatcta ccaggctacc agtgagtggc agaaagcaat tgatgttgcc gaacgcctgg
     7381 tgaagctggg taaagataaa cagcgcgtcg aaattgccca tttctactgt gagttagccc
     7441 tgcagcatat ggccagcgac gatctcgatc gtgccatgac cttgctaaaa aaaggggcgg
     7501 cggcagataa aaacagagcc cgcgtatcca tcatgatggg acgcgtgttt atggcgaaag
     7561 gagaatacgc caaagccgtc gaaagtttgc aacgcgtgat atcccaggac agagaactgg
     7621 tcagcgaaac gctggaaatg ttgcaaacct gctatcagca gttgggtaaa actgccgaat
     7681 gggcagaatt cctgcaacgc gcggtggaag agaacaccgg tgccgatgct gaattgatgc
     7741 ttgctgatat catcgaagcg cgcgacggta gtgaggccgc acaggtctat attacgcgcc
     7801 agcttcagcg tcatccgacc atgcgtgtgt tccataagtt aatggattac cacttaaatg
     7861 aagcggaaga agggcgtgcc aaagagagcc tgatggtgct gcgtgacatg gttggcgaaa
     7921 aggtacgtag taagcctcgt tatcgctgcc agaaatgtgg ttttaccgca tacaccctct
     7981 actggcattg tccgtcttgt cgggcctggt caaccattaa accgattcgc ggtcttgatg
     8041 gcctgtaatt tttaaaaaaa tccgacttta gttacaacat gctagttatt gatgttccat
     8101 tgtgctccgg caacgacgga gcagaaaaag cctgccaggg gaaaaatcgc aactgttaat
     8161 tttttatttc cacgggtaga atgctcgccg tttacctgtt tcgcgccact tccggtgccc
     8221 atcatcaaga aggtctggtc atgacgttaa ctgcttcatc ttcttcccgc gctgttacga
     8281 attctcctgt ggttgttgcc cttgattatc ataatcgtga tgacgcgctg tcctttgtcg
     8341 acaagatcga cccacgcgat tgtcgtctga aggtcggcaa agagatgttt acattgtttg
     8401 ggccacagtt tgtgcgcgaa cttcaacagc gtggttttga tatctttctt gacctgaaat
     8461 tccacgatat tcctaacact gcagcgcacg ctgtcgctgc tgcagctgac ttaggcgtgt
     8521 ggatggtgaa tgttcatgcc tctggtgggg cgcgtatgat gaccgcagcg cgtgaggcac
     8581 tggttccgtt tggcaaagat gcaccgcttt tgattgctgt aacagtgttg accagcatgg
     8641 aagctagcga cctggccgat cttggcgtga cactgtcacc tgcagattat gcagaacgtc
     8701 tggcggcact gacgcaaaaa tgtggccttg atggtgtggt gtgttctgct caggaagctg
     8761 tgcgctttaa acaggtattc ggtcaggagt tcaaactggt tacaccgggc attcgtccgc
     8821 aggggagtga tgctggtgac cagcgccgca ttatgacgcc agaacaggcg ttggcggctg
     8881 gtgttgatta tatggtgatt ggtcgcccgg taacgcaatc ggtagatcca gcgcaaacac
     8941 tgaaagcgat caacgcctct ttacagcgga gtgcatgatg agtgattcca acagccgtct
     9001 ggtctactca acggaaaccg gacgtattga tgagccaaaa gcggccccag tacgccctaa
     9061 aggcgatggt gtggtgcgta ttcagcgtca gaccagtgga cgtaaaggta agggcgtttg
     9121 cctgattacc ggtatcgatc tcgatgatgc cgaactgaca aaacttgcag cggaactgaa
     9181 gaaaaaatgc ggctgcggcg gagcagttaa agatggagtt attgaaatcc agggcgataa
     9241 gcgtgattta ttaaaatcac tacttgaagc gaaagggatg aaggtaaaac tcgcaggcgg
     9301 ttaacataaa aagccacgga tatatccgtg gctttcgaat attttactgt gtgtattatt
     9361 cagttatttc gtactgaaca aaatcaagcg tattataatt gcgagtcgat aatcgacatt
     9421 tatttacgat tatttaccga cctggtgacc aataacacca ccgacagctg caccacctaa
     9481 tgtacccaac gtactgccat cggtcagtac tgcaccgcct aatgcccctg cacccgcgcc
     9541 gattgcggtg ttgcggtccc gtttagacca gttagaacag gcactcagag acattgccaa
     9601 agtaattgcc agaacagccg cggtcatttt tttgctcgtt acaaacataa tactctctcc
     9661 tgaatttatg attcacggaa gtaagctctc tataactata atagctaaga ataagcctgg
     9721 tgaaattatt ccgtgaaatc tgctcgcgcg cagggttata tcacgcaggt gataatgact
     9781 tcctgttata tcgctgataa taattttata tcttaagcgt gttaataaca ggtaaatagt
     9841 cttaattatc aaccaggaat catcttagag cggatgattt gccaaactgc aaatcatccg
     9901 tagagaaggg aaatggttaa atgtcaacga cgtgaacggt gagtttactg tgctcaagat
     9961 gcatcagatc gctggcgcgt attttcgaat cggtaatcac gcgattgaat cgctcaacgg
    10021 gaccgatgga gtatgaatgt acagcaccaa atttcgagct gtcagtcagg actatcactt
    10081 cgcactcttt ttccagcacg gcattgacca catcggtacg catcatatcg cgaccggtga
    10141 atccagtttc aggttgccag ccatcaatac caataaatgc tttgctgaaa tgcacctgct
    10201 ggatgcactg gcgtgtcaac gggccaacca tactttcgct ttttttctgg tacacgccac
    10261 cgagcaaaat gacttcacaa ggcgcgtctt tcagcaaatg cgcgatgtag ctgctgaccg
    10321 tgatgatagt gacatttttc ttctgctccc ccagagtccg ggcgagcagg gcattgctgc
    10381 tgccattttc gataaagatg gtttcgcccg gttgaaccag tgacgcggca aactcggcga
    10441 gttcacgctt cagcgtatag ttgctcatca tacgggtttc gacgtcatca ctatcaagcg
    10501 aaactgcaaa gccatgtgca cggcggaggt aactcagttt ttcgagggtg ttgagatcct
    10561 ggcgaatggt aacttcagaa actccagtgg cttttgccag atcggttacg ctaacctgac
    10621 cctggtcaat gaccatctgt agaatagttt gttgtcggga attcatcgct gtaattctta
    10681 taacgttata atactaaata aaaaaatact gacgcgccgg gcatcctcaa ataggaaaac
    10741 ctgaaggcac gattgttaaa tctcccacgg tgccttcggg atgtctggcg tagattcagc
    10801 aacctggcgc aagagttctg ctttaagtat ctcgagatta tggatcgcag agtggtaatc
    10861 gcctgccaca aggatatcta acacaatatc aatacgttcg gcaacgcgct gggcatcaaa
    10921 ttcagacatc aaggacatcc ttatagcaaa agtggaaaat gaataatgca aaaattgccg
    10981 ctaaaagaga agtgtttaac agcaacggct aattatcatc caggaatacg atatataatg
    11041 acgggatata gcgctaagta tatatattca tctacttatg cgcgcttcag atagcgttta
    11101 taccagcgtt cgaaggcgac ggcgggcatc ggtttggcaa acaaaaatcc ttgccgctca
    11161 ttgatcccgt tcttggttaa aaaagcatct tcctttgcac tctctacacc ttcggcgatc
    11221 acctgaagat tcaatgcctg ggccacagcg acgatcgccc ggaccagtga ctgcgagaca
    11281 ggttgtttgt gaatatctcg aacaaaaacc tggtcaagtt tgatggcatc gatcggaaag
    11341 cgcgccagtt gcgaaagtga agagtagccg gtaccaaaat catccagatg cacttgcgca
    11401 cctagttggc taaattgttg aataacagac agtgccagtt catcattctc aatcagacaa
    11461 ctctctgtca gttcaacatc tatagggcag tattcaaaat tgagttcctg gagaacctgt
    11521 ttcagggcgg tgaaaatggt ttgatcggcg agctgacgtg cagaaatatt taccgccact
    11581 cgcaggttta tgcctttatc ccgccacttt gccacctggc gtacgacatc gagaatcacc
    11641 caacggccta aaggcacaat tagccctgac tcttcggcgt aggaaatgaa gtccaacggt
    11701 ggaatcaacc cacgttcagg tgactgccaa cgtactagtg cttccagact gcgcacttcg
    11761 ccacgccagg tgattttcgg ttgatagtga ataaccaact gatcgttttc cagtgcttta
    11821 cgcaagttgg tatccagcca gagatattca aatacccgtt gattcatttc tggggtaaaa
    11881 acgcaaaatt gtcctcgtcc gccttccttc gctgtgtaca ttgctgtgtc ggcgtgacga
    11941 ataatagccg tgctgtctga accatgttcg ggagagagtg caatacctac tgaacagctg
    12001 gtataaactt caattaaacc aatgcgaaag gggagccgta agcgggtcaa aattcgtgat
    12061 gccattgctt ccagcgcgct ttgtgaggtg ttggatgcca gtaccagaaa ctcatcccca
    12121 cctggacgcg ccaacacctg gtcatgttcg agacagctta aaatagccaa tgacacgtcg
    12181 cgtaataact ggtcaccaaa caaatgccca taggcgtcgt tgaccttttt gaaattatcc
    12241 aaatcaagat acacaacccc aactttattg ttatctgcat gattaatagc gtgatcgatt
    12301 aaatcctgca ttgcgttacg attcggcagt ccggtgatac tgtcggtatt tgccagaata
    12361 cgcagtcgct cctgagcgcg gcgctcttcg gtaatgtcgg tgccggaaca gattaaaaaa
    12421 atctcgcttt tgccactgcc gctgtggaca aatttattgc gaaacagaaa cagccgctgg
    12481 cctttacatg ttggtatcca cagttcgact tcatatgcat tgccgcttcg aaaaaataca
    12541 cggttattgc gcctggatgc cgcagcttca cgacggctca taaacagttt aaacacgctt
    12601 tggccaatga cgtcgtgttc tttcaaccca gtgtaatctt cacataaccg attgaagcgt
    12661 tggatattcc cccggctgtc gagaatcact attgcggaat gtgcttcaga aactacctgc
    12721 tcagcaaagg aaagcccgtg tgataaatca cgagcaactg ccggtgtgtc atgccatgca
    12781 gacgcgttgc cagcccattc ccgtttattg atttttcgtc ctaccagatg cacagaaaga
    12841 tcgctctcat cgacggtcag actcatcatc aggctggagg tgatgaccgt catttccctg
    12901 atgcgagcag cctgttcggc agataactgc aaagtacgat caggttctgt ggtttcggtg
    12961 gtagaaaagc gcaaaacatc gctgctttcc gtcaaccgcc agtatggatt gtgcgatccg
    13021 agaaagttgt acaacgttgt ggactcccta acggttttca tgatgcatat cctccggtta
    13081 aataaaa
//
LOCUS       DAJVUK010000121        12990 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.121, whole genome shotgun sequence.
ACCESSION   DAJVUK010000121 DAJVUK010000000
VERSION     DAJVUK010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12990
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.121"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(14..520)
                     /gene="mug"
                     /locus_tag="OQQ57_003116"
     CDS             complement(14..520)
                     /gene="mug"
                     /locus_tag="OQQ57_003116"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HCS1957789.1"
                     /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
     gene            645..720
                     /locus_tag="OQQ57_003117"
     tRNA            645..720
                     /locus_tag="OQQ57_003117"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:678..680,aa:Ile,seq:cat)
     gene            complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="OQQ57_003118"
     CDS             complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="OQQ57_003118"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HCS1957790.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            1826..2449
                     /gene="nfeR"
                     /locus_tag="OQQ57_003119"
                     /gene_synonym="yqjI"
     CDS             1826..2449
                     /gene="nfeR"
                     /locus_tag="OQQ57_003119"
                     /gene_synonym="yqjI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NfeR"
                     /protein_id="HCS1957791.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
                     GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
     gene            complement(2603..4123)
                     /gene="aer"
                     /locus_tag="OQQ57_003120"
     CDS             complement(2603..4123)
                     /gene="aer"
                     /locus_tag="OQQ57_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerotaxis sensor receptor Aer"
                     /protein_id="HCS1957792.1"
                     /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRARGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQ
                     ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSIIASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            4540..5919
                     /gene="ygjG"
                     /locus_tag="OQQ57_003121"
     CDS             4540..5919
                     /gene="ygjG"
                     /locus_tag="OQQ57_003121"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417544.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HCS1957793.1"
                     /translation="MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKE
                     HVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPV
                     VVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKL
                     AKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAM
                     RTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTG
                     MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFG
                     GNPLACAAALATINVLLEQNLLAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMA
                     IEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPQTLTIEQCELVIKAARKALA
                     AMRVSVEEA"
     gene            complement(5961..6293)
                     /locus_tag="OQQ57_003122"
     CDS             complement(5961..6293)
                     /locus_tag="OQQ57_003122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HCS1957794.1"
                     /translation="METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQ
                     TVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERM
                     MPAGVRVV"
     gene            6512..7495
                     /gene="ebgR"
                     /locus_tag="OQQ57_003123"
     CDS             6512..7495
                     /gene="ebgR"
                     /locus_tag="OQQ57_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator EbgR"
                     /protein_id="HCS1957795.1"
                     /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
                     LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN
                     CYEHSGLPDIKNVTGILIVGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLAR
                     ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
                     SSGYELAKQMLAQEDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
                     FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
     gene            7679..10771
                     /gene="ebgA"
                     /locus_tag="OQQ57_003124"
     CDS             7679..10771
                     /gene="ebgA"
                     /locus_tag="OQQ57_003124"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit alpha"
                     /protein_id="HCS1957796.1"
                     /translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL
                     SGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP
                     FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF
                     DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT
                     DFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF
                     AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV
                     MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL
                     FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES
                     GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR
                     IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGD
                     YGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTT
                     LDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSR
                     TRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKM
                     SGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQ
                     SDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFT
                     MGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRW
                     TALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLG
                     SNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ
                     "
     gene            10768..11217
                     /locus_tag="OQQ57_003125"
     CDS             10768..11217
                     /locus_tag="OQQ57_003125"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HCS1957797.1"
                     /translation="MRIIDNLEQFRQIYASSKKWQRCVEAIENIDNIQPGVAHSIGDS
                     LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
                     GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
     gene            11280..12713
                     /locus_tag="OQQ57_003126"
     CDS             11280..12713
                     /locus_tag="OQQ57_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1957798.1"
                     /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
                     LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
                     LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
                     LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
                     VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
                     FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
                     RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
                     HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFA
                     WWKYSKYIKGLTAEERHIEATPASNVD"
BASE COUNT         3133 a         3488 c         3248 g         3121 t
ORIGIN      
        1 tcggtggcgt tttttatcgc ccacgcacta ccagcgcctg gtccagctcg cgatacgctt
       61 caaccagttt ctctagtgaa acgcgactta aaccgctggg atttggcagc acccaaatct
      121 gcgtcgaacc aatggtgagc gtttgtttcc cccactgtgc accgcgctgg ctgaatccct
      181 gttcatatgc ttgtttgccc agaatcgcca acgcctgcgg ctgataatct tcaatttttt
      241 caatcagctt acgcccacct gcgtgcagct cctgctttga aacttcattg gcttgcaccg
      301 ttggacggtc taccagtttg gtgacgccac aacgataatc cagcagatgc tgtgcctcct
      361 gcggcttcaa ctgacggtcg gtaaacccgg cctgatatat caccttccag aagcgatttg
      421 ctggatgagc aaagggaaaa ccagtcccgg cggatgaaag cccagggttg ataccgcaaa
      481 acacgacccg taaccctgga gccaaaatat cctcaaccat atttactcct ttctaacatc
      541 accaggaaaa gtataacgga ttgaaaatac attgtttata aaaacagcag gcgcacggta
      601 atggctggat tgcgacacgg agttacttta taatccgcta ccatggcccc ttagctcagt
      661 ggttagagca ggcgactcat aatcgcttgg tcgctggttc aagtccagca ggggccacca
      721 gatatagcaa aggctgacga gaaatcgtca gcctttttct ttttatatct cagttacttt
      781 gcgtgccagt aagccgctgc acgtacccgc tgtgggtcat actgttccgc ttcaaagcgg
      841 cggcttaaat tcttaacgac tttaccttcg ccggttatcc agatgaagta atcatcggca
      901 gggatttgca tctgcgccag acgcgcatct accgcctgct catcatgtgc cagccattcg
      961 atattaaaac catcaaggtg cgcgagataa tcctgacagg cgttatcccg cacgctaacc
     1021 agcgcactaa cttgcggttt aacggcaagt ttgctcaacg tttccaggcg gcggcgcagt
     1081 gcgggcattc cggattcatc gcagacatac agctgatacg cgtaatcttc cggcaccacc
     1141 agcgaaccgc gcggaccagc caccgtaagt ttatcgcccg gttgcgcctg catcgcccag
     1201 ccgctggcga ccccaccgtc gtgaataaag aaatcgatcg ccagttcatg gcgtagttcg
     1261 tcatacagcg gcgtatagtc acgcgacggt gggcgtggtc cttccggcca gacgatgccc
     1321 tcttccgtta ccgttggcgg cacaaagtga gcgtcaggtt gaggaaagaa gagtttgctg
     1381 tgatcgtcaa agccgcgcga tgtaaaaccg tccagcgcct cgccgccgag gacaatgcgc
     1441 tgaaaaccgg cgctgatgcg ctcaacgcgt aacacagtca gttcacggaa gcgcagatca
     1501 ttgcgaacgc gctgcgggta gcggggggag ttattcattg ttatcgcctt cgtgatggta
     1561 atcagatata tctaaataat tttcgtaaat gataatgatt gttaatcatg ataaatgcaa
     1621 gcgattagta gaactgatat gtctatagtc tgataagacg aaccgcctct tctcaggcat
     1681 cattactcaa cgccggatgc ggcgtgaacg ccttatccgg cctacgtgtg agatgagtcc
     1741 acatttaaaa atcattttta ttcttgcaag agtgctcata tcagatataa attagatata
     1801 tctaatcaag aaaaaggagg ctgatatgag ccatcatcac gaagggtgtt gtaaacatga
     1861 aggccagcca cgccatgagg gctgctgcaa aggtgagaag tcagaacacg agcactgcgg
     1921 acacggtcac cagcatgaac acggtcaatg ctgcggtggt cgccacggtc gcggcggcgg
     1981 tcgtcggcaa cgtttctttg gtcacggtga attgcgtctg gtgattctgg atattctctc
     2041 gcgcgatgac agccacggtt acgaattgat taaagcgatt gagaatctaa cccaggggaa
     2101 ttacacccca agcccgggcg tcatctaccc aacgctggat tttctgcagg agcagtcgct
     2161 gattaccatc cgcgaagagg aaggtggtaa gaagcagatt gcgctgaccg aacaaggcgc
     2221 gcagtggctg gaagaaaacc gcgaacaggt ggagatgatt gaagaacgca tcaaagcgcg
     2281 ttgcgttggc gcggcgctgc gccagaaccc gcaaatgaag cgggcgctgg ataattttaa
     2341 agcggtgctg gatttacgcg tcaaccagag cgatatcagt gatgcacaaa taaaaaagat
     2401 cattgcggtg atcgaccgcg ccgcttttga tattacgcaa ctggattaat cgccgcatcc
     2461 gccagtggcg cggtgcaatt gccggatgcg acgcttgacg cgccttatcc ggcctacacc
     2521 cactacacac cccgcaggcc tgataagatg cgccagcatc gcatcaggca ttgtgctcca
     2581 accgccggat ccggcatacc gattaatgca gcaccgtcac cgcgtcttcc agtcggctgg
     2641 cgcggtgttt caccatcgcc gacacctgcg cactctcttc caccagctca gcatttttct
     2701 gggtgatcag gttaagctca tccactgcac gggtcaggct ggaaagccca tcggcctgtt
     2761 ccagcgttga atggctaatc tgggcgatca actgggtgac gtttttcacc tgtgccacaa
     2821 tatcttccat cgtccgtccg gcggcgtgta cctgctgcga accggattgc accttatcag
     2881 cactggcatc aatcagcttg cgaatatcgt tggcagcatt agcgctgcgg ctggctaaat
     2941 gacgcacttc ccctgccacc actgcaaaac ctttgccctg ttcgccggca cgcgccgctt
     3001 ccaccgccgc attcagggcc agaatattgg tctgaaacgc aatatcgtta atcagcgaag
     3061 taatggtgcc aatgcgctgg gtactgtcgg cgatatcgtc cattgtcttg atcaccgtgg
     3121 tcatcgcctc cccaccctgc actgccgcat tactggcgat gatagaaagt ttatcggcag
     3181 ccgacgccgt ggcagagttc tgtttcaccg acgccgccat ttggttcatg gtcgccaccg
     3241 tttgctgaac gttatcaact gtctgctggg tatgttcgtt cagttcatcg gtgcctttcg
     3301 ccagcgtctc actgccattt ctgacactgg acacctggct tgagacatcg ttaattagcc
     3361 aacggcacat caggccaagc tgccctaccg cgcgtaatgt cagccccagc tcatcgctgc
     3421 gattcaggtg ctcaacacta ttacgctctc cggtcgccac cttcagtgcc tgacgggcga
     3481 cattttctat cgggcgcaca atctgccatt caaaacaagc gcttgccaac aataccacta
     3541 acacacagag gaaatacgtc accaccgggg cagcaacaaa ccaaagcatg gccgccagca
     3601 agataaacat cagggtcatc actccacgcg cccgccagcg aagcggtaat gaaggcagtt
     3661 tacccagcca gcctttacgc accaccaggc ctttatgaat acgcttactg gtacgtccgg
     3721 cgttcagcgc tttgtacagc ggctccaccg ccgcaatctc ttcatccgtc gcccgggtac
     3781 gaatcgacat atagccactg atttttccct cgcgcaccat cggtaccgca ttggcccgca
     3841 cccaataatg gtcgccattt ttgcggcgat ttttcacgat gccgctccag ggctcccctt
     3901 ttttcagggt gaaccacata tccgcaaacg ccgcttttgg catatccggg tgacgcacca
     3961 tgttgtgcgg ctgcccttgt aactcttgca aggtaaagcc gctcacctgc acaaaagtgt
     4021 cattagcatg agtgatatag ctttgcagat cggtagtgga catcagagtg gtatcgtccg
     4081 ccagcggggt attttgctgg gtgacatacg gatgagaaga catgttcgcg tcctatgcag
     4141 gttatatggt tgttaacttc ttgtcagagt ttatgtcggc cccgctgcgg ttatctttaa
     4201 ccgattaatt tgatttagat cgcaatttgc gattaaagca caaatctaat tccttgattt
     4261 aaaatacttt cactctgtta ctatacgaaa acgttaatta tcttgcccaa aatcaggcaa
     4321 ttatcgccct gaaaacgtgc atttgcacag caatcatcaa atccataccc gacaaaaacc
     4381 gtgcaaaata acaacgaatg ttaacaaata gcattaaata ctgcgcaaat gataaccaca
     4441 tttgtgttta tcccgatttt cgcgatcgca gccggagtgg cgcaatccct gcaatactta
     4501 aatcggtatc atgtgatacg cgagcctccg gagcatattt tgaacaggtt accttcgagc
     4561 gcatcggctt tagcgtgcag cgcccacgcc ctgaatctca ttgagaagcg aacgctggat
     4621 catgaggaga tgaaagcact taaccgagag gtgattgaat acttcaaaga gcatgtcaat
     4681 ccggggtttt tagagtatcg caaatctgtt accgccggcg gggattacgg agccgtagag
     4741 tggcaagcgg gaagtttaaa tacgcttgtc gacacccagg gacaggagtt tatcgactgc
     4801 ctgggaggtt ttggaatttt caacgtgggg caccgtaatc cagttgtggt ttccgccgta
     4861 cagaatcaac ttgcgaaaca accgctgcac agccaggagc tgctcgatcc gttacgggcg
     4921 atgttggcga aaacccttgc tgcgctaacg cccggtaaac tgaaatacag cttcttctgt
     4981 aatagcggca ccgagtccgt tgaagcagcg ctgaagctgg cgaaagctta ccagtcaccg
     5041 cgcggcaagt ttacttttat tgccaccagc ggcgcgttcc acggtaaatc acttggcgcg
     5101 ctgtcggcca cggcgaaatc gaccttccgc aaaccgttta tgccgttact gccgggcttc
     5161 cgtcatgtgc cgtttggcaa tatcgaagcc atgcgcacgg ctcttaacga gtgcaaaaaa
     5221 accggtgatg atgtggctgc ggtgatcctc gaaccgattc agggtgaagg tggcgtaatt
     5281 ctgccgccgc cgggctatct caccgccgta cgtaagctat gcgatgagtt cggcgcactg
     5341 atgatcctcg atgaagtaca aacgggcatg gggcgcacgg gcaagatgtt cgcctgcgag
     5401 catgagaacg tacagccgga tatcctctgc cttgccaaag cgctcggcgg cggcgtgatg
     5461 ccgattggcg cgaccatcgc cactgaagag gtgttttcag ttctgttcga caacccattc
     5521 ctgcatacca ccacctttgg cggcaacccg ctggcctgtg cggcggcgct ggcgaccatc
     5581 aatgtgttgc tggagcagaa cttactggct caggctgagc aaaaaggcga tatgttgctg
     5641 gacggtttcc gtcaactggc gcgggaatat cccgatctgg tacaggaagc gcgtggtaaa
     5701 gggatgttga tggcaattga gtttgttgat aacgaaatcg gctataactt tgccagcgag
     5761 atgttccgcc agcgcgtact ggtggccgga acgctcaata acgccaaaac gatccgcatt
     5821 gaaccgccac agacactgac cattgaacag tgtgaactgg tgatcaaagc ggcgcgtaag
     5881 gcgctggcgg ccatgcgagt aagtgtcgaa gaagcgtaat atcaaatcgg atggcgatac
     5941 gacgtcgcca tccgatcttt ttatacgacg cgtacgcccg caggcatcat ccgctccggc
     6001 gttaacaaca cgctttcact gccgtcatcg gtttccgcac acaacagcat gcattccgac
     6061 gtttcaccac gcattttcgc tttttgcaga ttgcataaga ccaccaccgt tttccccatc
     6121 agctcttctt cgctgtagta cggcaccagg ctggtcacgg tttgcagtgt tttttccccc
     6181 acatcaacct gtacgatgta cagcttgtcg gcgttttcat ggcgtttcac ttccacaatc
     6241 tttccgacgc gcatttccag acgtgcaaaa tcagcgtaag ccacggtttc cattgtttcc
     6301 ttccttcggg taaaatttta ctaaactata gcaaaagttt ttctcaatcc tgtaggctaa
     6361 aaatggagaa tgcaggcgtg atcacattcg tgagccgctg tgttaccgtt acagcgtcaa
     6421 agaaacgcgc tttatttact gaaaacaggt gacccgataa gtacttcctc tacaatgggg
     6481 gcgcacatca gggaaagtaa aaaaggtaaa catggcaaca ctaaaagaca tcgcaatcga
     6541 agctggcgta tccctggcga cagtatccag ggtcttaaat gacgatccga cattgaatgt
     6601 gaaagaagag acaaaacatc gcattctcga gatcgccgaa aagctggagt acaagaccag
     6661 tagtgcccgc aaactccaga caggtgcagt caaccaacac catattctgg ctatctacag
     6721 ctaccaacag gagctggaga tcaacgatcc ttactatctg gcgatccgcc acggcattga
     6781 aactcagtgc gaaaagctgg gcattgagct caccaactgt tatgaacaca gcggattacc
     6841 agacattaaa aacgtcaccg gtattttaat tgtcggcaaa cccacgcccg cccttcgcgc
     6901 cgccgcctgt gcgttgaccg acaatatctg ttttatcgac tttcacgaac ccggcagcgg
     6961 ttacgatgcg gtggatatcg atctggcacg catcagtaaa gaaatcatcg acttctatat
     7021 caatcagggc gttaatcgta ttggttttat tggcggtgaa gatgagccag gcaaagcgga
     7081 tattcgtgag gtcgcctttg cggaatatgg ccgactgaaa caagtggtac gcgaagagga
     7141 tatctggcgc ggaggctttt ccagttcgtc gggttatgaa ctggcaaaac agatgctggc
     7201 gcaggaagac tatccgaagg cactgtttgt tgcttccgat tccattgcta tcggcgtact
     7261 gcgggcaatt catgaacgag gcctgaacat cccacaggat atttcgctta tcagcgttaa
     7321 cgatatcccc accgcgcgat ttacctttcc gccgctctcc accgtgcgca tccattccga
     7381 gatgatggga agtcagggcg ttaacctggt gtatgaaaaa gcccgcgatg gtcgcgcgct
     7441 gccgctgtta gtcttcgttc ccagcaaatt aaaactgcgc ggcacgaccc gttaaatccc
     7501 cttacacact gtccggcaat cgtttttgcc ggacagtgct gccgtttatt ttcgtgatcc
     7561 agttaaagta aatgcattta tctgctactt tttagtaaaa attttactaa actccccagc
     7621 aattacacaa actaccatca ccatgaatgg ttccgatttc tctctaccgg gaggccctat
     7681 gaatcgctgg gaaaacattc agctcaccca cgaaaaccga cttgcgccgc gtgcgtactt
     7741 tttttcatat gattctgttg cgcaagcgcg tacctttgcc cgcgaaacca gcagcctgtt
     7801 tctgccctta agcggtcagt ggaatttcca cttttttgac catccgctgc aagtaccaga
     7861 agccttcacc tctgagttaa tggctgactg ggggcatatt accgtccccg ccatgtggca
     7921 aatggaaggt cacggcaaac tgcaatatac cgacgaaggt tttccgttcc ccatcgatgt
     7981 gccgtttgtc cccagcgata acccaaccgg tgcctatcaa cgtattttca ccctcagcga
     8041 cggctggcag ggtaaacaga cgctgattaa atttgacggc gtcgaaacct attttgaagt
     8101 ctatgttaac ggtcagtatg tgggtttcag caagggcagt cgcctgaccg cagagtttga
     8161 catcagcgcg atggttaaaa ccggcgacaa cctgttgtgt gtgcgcgtga tgcagtgggc
     8221 ggactctacc tacgtggaag accaggatat gtggtggtca gcggggatct tccgcgatgt
     8281 ttatctggtc ggaaaacacc taacgcatat taacgatttc actgtgcgta ccgactttga
     8341 cgaagcctat tgcgatgcca cgctttcctg cgaagtggtg ctggaaaatc tcgccgcctc
     8401 ccctgtcgtc acgacgctgg aatataccct gtttgatggc gaacgcgtgg tgcacagcag
     8461 cgccattgat catttggcaa ttgaaaaact gaccagcgcc agctttgctt ttactgtcga
     8521 acagccgcag caatggtcag cagaatcccc ttatctttac catctggtca tgacgctgaa
     8581 agacgccaac ggcaacgttc tggaagtggt gccacaacgc gttggcttcc gtgatatcaa
     8641 agtgcgcgac ggtctgttct ggatcaataa ccgttatgtg atgctgcacg gcgtcaaccg
     8701 tcacgacaac gatcatcgca aaggccgcgc cgttggaatg gatcgcgtcg agaaagatct
     8761 ccagttgatg aagcagcaca atatcaactc cgtgcgtacc gctcactacc cgaacgatcc
     8821 gcgtttttac gaactgtgtg atatctacgg cctgtttgtg atggcggaaa ccgacgtcga
     8881 atcgcacggc tttgctaatg tcggcgatat cagccgtatt accgacgatc cgcagtggga
     8941 aaaagtctac gtcgagcgca ttgttcgcca tatccacgcg cagaaaaacc atccgtcgat
     9001 catcatctgg tcgctgggca atgaatccgg ctatggctgt aacatccgcg cgatgtacca
     9061 tgcggcgaaa gcgctggatg acacgcgact ggtgcattac gaagaagatc gcgatgctga
     9121 agtggtcgat attatttcca ccatgtacac ccgcgtgccg ctgatgaatg agtttggtga
     9181 atacccgcat ccgaagccgc gcatcatctg tgaatatgct catgcgatgg ggaacggacc
     9241 gggcgggctg acggagtacc agaacgtctt ctataagcac gattgcattc agggtcatta
     9301 tgtctgggag tggtgcgacc acgggatcca ggcacaggac gaccacggca atgtctggta
     9361 taaattcggc ggcgactacg gcgactatcc caacaactat aacttctgtc ttgatggttt
     9421 gatctattcc gatcagacgc cgggaccggg cctgaaagag tacaaacagg ttatcgcgcc
     9481 ggtaaaaatc cacgcgcggg atctgactcg cggcgagttg aaagtcgaaa ataaactgtg
     9541 gtttaccacg cttgatgact acaccctgca cgcagaggtg cgcgccgaag gtgaaacgct
     9601 cgcgacgcag cagattaaac tgcgcgacgt tgcgccgaac agcgaagccc ccttgcagat
     9661 cacgctgccg cagctggacg cccgcgaagc gttcctcaac attacggtga ccaaagattc
     9721 ccgcacccgc tacagcgaag ccgggcattc tatcgccact tatcagttcc cgctgaagga
     9781 aaacaccgcg cagccagtgc ctttcgcacc aaataatgcg cgtccgctga cgctggaaga
     9841 cgatcgtttg agctgcaccg ttcgcggcta caacttcgcg atcaccttct caaaaatgag
     9901 tggcaaaccg acatcctggc aggtaaatgg cgagtcgctg ctgacccgcg agccaaagat
     9961 caacttcttc aagccgatga tcgacaacca caagcaggag tacgaagggt tgtggcagcc
    10021 gaatcatttg cagatcatgc aggaacatct gcgcgacttt gccgtagaac agagcgatgg
    10081 tgaagtgttg atcatcagcc gcacagttat tgcaccgccg gtgtttgact tcgggatgcg
    10141 ctgtacctac atctggcgca tcgctgccga tggccaggtt aacgtggcgc tttccggcga
    10201 gcgttacggc gactatccgc acatcattcc gtgcatcggt ttcaccatgg ggattaacgg
    10261 cgaatacgat caggtggcgt attacggtcg tggaccgggc gaaaactacg ccgacagcca
    10321 gcaggctaac atcatcgata tctggcgcag caccgtcgat gccatgttcg agaactatcc
    10381 cttcccgcag aacaacggca accgtcagca tgtccgctgg acggcactga ctaaccgcca
    10441 cggcaacggt ctgctggtgg ttccgcagcg cccaattaac ttcagcgcct ggcactatac
    10501 ccaggaaaac atccacgctg cccagcactg taacgagctg cagcgcagtg atgacatcac
    10561 cctgaacctc gaccaccagc tacttggcct cggctccaac tcctggggca gcgaggtgct
    10621 ggactcctgg cgcgtctggt tccgtgactt cagctacggc tttacgttgc tgccggtttc
    10681 tggcggagaa gctaccgcgc aaagtctggc gtcgtatgag ttcggcgcag ggttcttttc
    10741 cacgaatttg cacagcgaga ataagcaatg aggatcatcg ataacttaga acagttccgc
    10801 cagatttacg cctctagcaa gaagtggcaa cgctgcgttg aagcgattga aaatatcgac
    10861 aacattcagc ctggcgtcgc ccactccatc ggtgactcat tgacttaccg cgtggagaca
    10921 gactccgcga ccgatgcgct atttaccggg catcgacgct attttgaagt gcattactac
    10981 ctgcaagggc agcaaaaaat tgaatatgcg ccgaaagaga cattacaggt agtggaatat
    11041 tatcgtgatg aaactgaccg tgaatattta aaaggctgcg gagaaaccgt tgaggtccac
    11101 gaagggcaaa tcgttatttg cgatatccat gaagcgtatc ggtttatctg caataacgcg
    11161 gtcaaaaaag tggttctcaa agtcaccatc gaagatggtt atttccataa caaataacaa
    11221 ctacggcggc aaaaggagtt tgccgccacc gctaccctac acattttcgg agatgtgtta
    11281 tgtctgatac caaacgtaat acaatcggca aattcggctt gctctcgctg acttttgctg
    11341 ccgtttacag ctttaacaac gttatcaata ataatattga gcttggactg gcctcggcac
    11401 cgatgttttt cctcgcgacg attttttatt ttattccctt ctgtctgatc atcgcagaat
    11461 ttgtttcgtt aaataaaaac tcagaagccg gtgtctacgc gtgggtaaaa agttcgctgg
    11521 gcggacgttg ggcatttatt actgcctata cctactggtt cgtaaacctg ttctttttca
    11581 cctcactgtt gccgcgcgtt attgcttatg cttcgtatgc cttcctcgga tacgaatata
    11641 ttatgacgcc ggttgccacc accattatca gtatggtgct gttcgccttc tccacctggg
    11701 tttccaccaa cggggcgaaa atgttggggc caattacctc cgtcacttca acgctgatgc
    11761 tgctgttaac gctctcctac attttactgg caggtacggc gctggttggc ggcgtacagc
    11821 ctgctgaccc catcaccgtt gacgcgatga tcccgaactt caactgggcg ttcctcggcg
    11881 ttaccacctg gatctttatg gccgcaggtg gcgcggagtc cgtcgctgtg tacgttaacg
    11941 acgtcaaagg cggttcgaaa tcgttcgtta aagtgatcat cctcgccggg atttttatcg
    12001 gcgtactgta ttccgtctcc tcggtgctga ttaacgtctt cgtcagcagc aaagagttga
    12061 aatttaccgg cggatcggtg caggtattcc atggcatggc ggcgtatttt ggtctaccgg
    12121 aagcgttgat gaatcgcttt gtcggtctgg tgtcctttac cgcgatgttc ggttccctgc
    12181 tgatgtggac cgcaacgccg gtgaaaattt tcttctccga aatcccggaa ggcatctttg
    12241 gtaagaaaac cgtcgaactg aacgaaaacg gcgttccggc gcgcgcagcg tggatccagt
    12301 tcctgatcgt catcccgctg atgattatcc cgatgctcgg ttccaatacc gtgcaggatc
    12361 tgatgaatac tattattaat atgaccgccg cagcgtccat gcttccgccg ttattcatca
    12421 tgctggctta cctgaattta cgcgccaaat tagatcacct gccacgcgat ttccgtatgg
    12481 gctcccgccg caccggtatt atcgttgttt caatgctgat tgcgatattt gccgtagggt
    12541 ttgtcgcttc gacattcccg actggcgcga atattctgac catcattttt tataacgtcg
    12601 gcggtattgt tatcttcctt ggctttgcgt ggtggaaata cagtaaatat ataaagggat
    12661 taacggctga agagcgccat attgaagcga cgccagccag caatgttgat taagcagaat
    12721 aataaaaaat gagcaggcat tttccctctt cctggatgag gagagggaaa atagtttctg
    12781 cctttatatt tttataatta caacgataaa aggctgtact ttttctttag ctcatggatt
    12841 aacacaatga aattaatcac tgcaccatgc agagcattac ttgctctgcc gttttgctac
    12901 gccttttctg cggcaggaga agaagcacgt ccggcagaac atgacgacac aaaaacaccc
    12961 gcaattacct cgacatcttc tccttcattt
//
LOCUS       DAJVUK010000122        12952 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.122, whole genome shotgun sequence.
ACCESSION   DAJVUK010000122 DAJVUK010000000
VERSION     DAJVUK010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12952
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.122"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(234..1574)
                     /gene="fadL"
                     /locus_tag="OQQ57_003127"
     CDS             complement(234..1574)
                     /gene="fadL"
                     /locus_tag="OQQ57_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HCS1957799.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
                     NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
                     LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
                     SGNTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
                     WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
     gene            1946..2230
                     /locus_tag="OQQ57_003128"
     CDS             1946..2230
                     /locus_tag="OQQ57_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HCS1957800.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL
                     AALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            2410..3720
                     /gene="fadI"
                     /locus_tag="OQQ57_003129"
     CDS             2410..3720
                     /gene="fadI"
                     /locus_tag="OQQ57_003129"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HCS1957801.1"
                     /translation="MGQVLPLVTRQGDRIAIVSCLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            3720..5864
                     /gene="fadJ"
                     /locus_tag="OQQ57_003130"
     CDS             3720..5864
                     /gene="fadJ"
                     /locus_tag="OQQ57_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HCS1957802.1"
                     /translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTVQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTTLEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTKGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVSERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            6067..6552
                     /gene="sixA"
                     /locus_tag="OQQ57_003131"
     CDS             6067..6552
                     /gene="sixA"
                     /locus_tag="OQQ57_003131"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HCS1957803.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            7227..7487
                     /locus_tag="OQQ57_003132"
     CDS             7227..7487
                     /locus_tag="OQQ57_003132"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1957804.1"
                     /translation="MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCS
                     IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDT"
     gene            7494..7790
                     /locus_tag="OQQ57_003133"
     CDS             7494..7790
                     /locus_tag="OQQ57_003133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1957805.1"
                     /translation="MTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSY
                     KSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL"
     gene            7872..10514
                     /gene="yfcU"
                     /locus_tag="OQQ57_003134"
     CDS             7872..10514
                     /gene="yfcU"
                     /locus_tag="OQQ57_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
                     /protein_id="HCS1957806.1"
                     /translation="MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKG
                     DTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELV
                     AQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
                     PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNY
                     QHTRSNDDDEFSGDETQKKWEWSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGG
                     SVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSV
                     SGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQIRYKIMMGRPQEWGHHVEGEFFSGA
                     EASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
                     GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMVRTGNDKEM
                     CTATYNQNFRDAGVSVYLNYTRHTYWDREEQINYNIMLSHYFNMGSIRNVSISMTGYR
                     YEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGT
                     SDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMG
                     GTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNRLPENAEAT
                     QSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDD
                     GNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPITSPAV
                     KPAIQEQTQRVTPTEPPTSISVNQ"
     gene            10534..11286
                     /locus_tag="OQQ57_003135"
     CDS             10534..11286
                     /locus_tag="OQQ57_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000482750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCS1957807.1"
                     /translation="MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDK
                     SISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQVKVQGLPDI
                     NKLPADRESVFYFNVREISPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV
                     TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPV
                     LTYINDYGARMPLYFKCTGNSCQVDEEQSRKG"
     gene            11302..11811
                     /locus_tag="OQQ57_003136"
     CDS             11302..11811
                     /locus_tag="OQQ57_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001733155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1957808.1"
                     /translation="MSHKFVAGAGLLVLAGWGISGLAVAGSDIKQVDLTLRILVDGPP
                     PCSVKGSAVKFGNVIINRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETV
                     LSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
                     TMTMVVDYQ"
     gene            11808..12296
                     /locus_tag="OQQ57_003137"
     CDS             11808..12296
                     /locus_tag="OQQ57_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1957809.1"
                     /translation="MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIE
                     VQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVP
                     GFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
                     YQ"
     gene            12293..12832
                     /locus_tag="OQQ57_003138"
                     /pseudo
     CDS             12293..12832
                     /locus_tag="OQQ57_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416836.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
BASE COUNT         3261 a         3087 c         3438 g         3166 t
ORIGIN      
        1 gtatcctgga aatgcagaaa agtaaactct ttgagaagga cgagcagaac gcctgaaaat
       61 atgcctttcc cttcaggttt gtctgtggat accgcttatt gatttgaaag ggcaagcggc
      121 caacaggctg tttgcaaaac tcaggaggta agcaatgagg acactacttt cggtgaagtg
      181 ggggagttaa agtcacctgc tatgcaggtg actttatcca ggcgaacgcg ttatcagaac
      241 gcgtagttaa agttagtacc gaacagccag gctttacctt cagactcgaa ctggtatggg
      301 ccttcgttaa ttttcacgct ctgaccgtgc atataagaaa caccaacgtc gactgaagca
      361 tctttattaa atgcgtaagt cgtacctgca ctcagccaga aacggtcctg gtccggaatg
      421 gagatagaac gattctgagc cggaactggg ctgtcatcaa aggcgatacc ggtacggaag
      481 gtccagttat catcgtagta ataagtggta cccaacgcga tgcggtaagc atctttaaag
      541 ccttcatgtt tctggaacag cgtgttgcca ctggttgagg tcgctttcag ctgctggaac
      601 tgactccagc tggtgtaagc caggctatag tgaatcgccc actgtggatc aacacggtta
      661 taacctgaca cttcccacat ttcaggcagg ttcagcgtca gataacccga ttgcgttgcg
      721 ccacctgtcg cggtaggaat tggcaaaccg tagttattaa acgcacgatt aagatcgctg
      781 ctgtagttac ctttgaagtc aattttcact tcagaacggt aggtcagtgc atagcggtta
      841 tttttatcca gttcatacag gattccggcg ttccagccaa agccccactg gttaccgttc
      901 agatgagcga ttttggtatt actgtcgata ccgttggcgg tagctgccaa tgcttgccct
      961 tgaggagttt gcccggcagg agattgcata atctgaccag caaccaactg ccccagatcg
     1021 cctgcgaaac gttcaatttt cgcgcgagcg tagacggcgt tgaaaccaag accaaagctc
     1081 catgcattat ttaagcgata cgcaccgctt aagttcaggt tcatggtttc aaggtcagtt
     1141 gtacccccga cagagccgcc tgcataagta tcattaaact ctgttgccag accatagtta
     1201 gaggtaatag aagcgcccca accaaattgg tcgttaatcg gtgcaacaaa gtgcatgttc
     1261 ggaacccatg ccgtaggcgc gatgttatcg gctttcaggc tacgaccaga cggagacgtt
     1321 ccgctgatat tcacatccgg gtcaatataa accgcacccg cagaaaatgt cgggcggtca
     1381 aacatggtaa tcaatgcggg gttacggcta acgttacctg catcatcggc aattgcgcct
     1441 tcccctgaat aagcccggcc caggccagag gaagaaaatt cgtttaactg aaagcctgcc
     1501 gaccaggcct gggtggagat aagtgccact gcgactgcga gagcagactt tgtaaacagg
     1561 gttttctggc tcatgaccat aacctcaatg atttattttt atacaaacta tgttacgtgc
     1621 tgtaacagga gcgcgaagtg tagggtctga ggtacatctt agaaatcaga ccagtggcga
     1681 gagtataggt cggaccagct ggaatgttgc aagtatgttt ccatcttttt tcaaatatga
     1741 tctaagaaac gcgatccagc tggcaaaatt tggaggttgc gcactcgcgg attcgggtga
     1801 attttgtttt agatcatttt taagtgtgat ttcggtcact tatccgattt tgcagaatta
     1861 acaactggag cagcactttc cggaagcgta aaatatccac aacgtttatc tggcaccttg
     1921 ggtgcacata cagaggaaat caacgatgag taaatgtagt gctgatgaaa ccccggtttg
     1981 ctgctgtatg gatgttggca ccattatgga caactccgac tgcaccgcgt cttacagccg
     2041 cgtgtttgca aaccgcgcag aagcagaaca aacgctggcg gcgttgactg aaaaagcccg
     2101 tagcgtggaa tccgaaccgt gcaaaatctc cccgactttc actgaagagt ctgacggtgt
     2161 gcgcctggat atcgatttca cttttgcctg cgaagctgaa atgctgatct tccagctggg
     2221 tctgcgttaa ttcctctcgg gtacgttcgc ccctgtcagt tgctggcagg ggcgttttct
     2281 tttctttctc ctgtcttcac tgtgtcatag ctcccacttt cctttttctc cgcttggcta
     2341 aatgtaaaaa aatggttaag actataatca ggtcagacca ctttatttat ttttttacag
     2401 gggagtgtta tgggtcaggt tttaccgctg gttacccgcc agggcgatcg tatcgccatt
     2461 gttagctgtt tacgtacgcc ttttgcccgc caggcgacgg cttttcatgg cattcccgcg
     2521 gttgatttag ggaagatggt ggtaggcgaa ctgctggcac gcagcgagat ccccgctgaa
     2581 gtgattgaac agctggtctt tggtcaggtc gtacaaatgc ctgaagcccc caacattgcg
     2641 cgtgaaattg ttctcggtac cggaatgaat gtgcataccg atgcttacag cgtcagccgc
     2701 gcttgcgcta ccagtttcca ggcggttgca aacgtcgcag aaagcctgat ggcgggaact
     2761 atccgagcgg ggattgccgg tggggcagat tcctcttccg tattgccaat tggcgtcagt
     2821 aaaaaactgg cgcgcgtgct ggttgatgtc aacaaagctc gaaccatgag ccagcgcctg
     2881 aaactcttct ctcgcctgcg tttgcgcgat ttaatgcccg taccgcctgc agtagcagaa
     2941 tattctaccg gcttgcggat gggtgacacc gcagagcaaa tggcgaaaac ctacggcatc
     3001 acccgagaac agcaagatgc attagcgcac cgttcgcatc agcgtgccgc tcaggcatgg
     3061 tcagacggaa aactcaaaga agaggtgatg actgccttta tccctcctta taaacaaccg
     3121 cttgtcgaag acaacaatat tcgcggtaat tcctcgcttg ccgattacgc aaagctgcgc
     3181 ccggcgtttg atcgcaaaca cggaacggta acggcggcaa acagtacgcc gctgaccgat
     3241 ggcgcggcag cggtgatcct gatgactgaa tcccgggcga aagaattagg gctggtgccg
     3301 ctggggtatc tgcgcagcta cgcatttact gcgattgatg tctggcagga catgttgttc
     3361 ggtccggcct ggtcaacacc gctggcgctg gaacgtgccg gtttgacaat gagcgatctg
     3421 acattgatcg atatgcacga agcctttgca gctcagacac tggcgaatat tcagttgctg
     3481 ggtagtgaac gttttgcttg tgaagtactg gggcgtgcac atgccactgg cgaagtggac
     3541 gatagcaaat ttaacgtgct tggcggttcg attgcttacg ggcatccctt cgcggcgacc
     3601 ggcgcgtgga tgattaccca gacattgcat gaacttcgcc gtcgcggcgg tggatttggt
     3661 ttagttaccg cctgtgctgc cggtgggctt ggcgcggcaa tggttctgga ggcggaataa
     3721 tggaaatggc atcagcgttt actcttaatg ttcgtctgga caacattgct atcatcacca
     3781 tcgacgtacc ggatgagaaa atgaataccc tgaaggcgga atttgcctcg caggtgcgcg
     3841 ccattattaa gcaactccgt gaaaacaaag agttgcgcgg cgtggtgttt atctccgcga
     3901 aaccggacaa ttttatcgcc ggagcagaca tcaacatgat cggcaactgc aaaacggtgc
     3961 aagaagcgga agctctggcg cggcagggcc aacagttgat ggcggagatt catgctttgc
     4021 ccattccggt tatcgcggct attcatggcg cttgcctggg tggtgggctg gagttggcgc
     4081 tggcgtgcca cggtcgcgtt tgtactgacg atcctaaaac ggtgctcggt ttgcctgaag
     4141 tacaacttgg attgttaccc ggttcaggcg gcacccagcg tttaccgcgt ctgataggcg
     4201 tcagcacaac attagagatg atcctcaccg gaaaacaact tcgggcgaaa caggcattaa
     4261 agctggggct ggtggatgac gttgttccgc actccatttt gctggaagtc gctgttgagc
     4321 tggcgaagaa ggatcgccca tcttcccgcc ctctacctgt acgcgagcgt attctggcgg
     4381 ggccgttagg tcgtgcgctg ctgttcaaaa tggtcggcaa gaaaacagaa cacaaaactc
     4441 aaggcaatta tccggcgaca gaacgcatcc tggaggttgt tgaaacggga ttagcgcagg
     4501 gcaccagcag cggttatgac gccgaagctc gggcgtttgg cgaactggcg atgacgccac
     4561 aatcgcaggc gctgcgtagt atcttttttg ccagtacgga cgtgaagaaa gatcccggta
     4621 gtgatgcacc gcctgcgcca ttaaacagcg tgggaatttt aggtggtggc ttgatgggcg
     4681 gcggtattgc ttatgtcact gcttgtaaag cggggcttcc ggtcagaatt aaagatatca
     4741 acccgcaggg cataaatcat gcgctgaagt acagttggga tcagctggag ggcaaagttc
     4801 gccgtcgtca tctcaaagcc agcgaacgtg acaaacagct ggcattaatc tccggaacga
     4861 cggactatcg cggctttgcc catcgcgatc tgattattga agcggtgttt gaaaatctcg
     4921 aattgaaaca acagatggtg gcggaagttg agcaaaattg cgccgctcat accatctttg
     4981 cttcgaatac gtcatcttta ccgattggtg atatcgccgc tcacgccacg cgacctgagc
     5041 aagttatcgg cctgcatttc ttcagtccgg tggaaaaaat gccgctggtg gagattattc
     5101 ctcatgcggg tacatcagcg caaaccatcg ccactacggt aaaactggcg aaaaaacagg
     5161 gcaaaacgcc cattgtcgtg cgtgacaaag ccgggtttta cgtcaatcgc atcttagcgc
     5221 cttacattaa tgaagctatc cgcatgctga ccaaaggtga acgggtagag cacattgatg
     5281 ccgcgctagt gaaatttggt tttccggtag gtccaatcca acttttggat gaggtaggaa
     5341 tcgacaccgg gactaaaatt attcctgtac tggaagccgc ttatggagaa cgttttagcg
     5401 cgcctgcaaa tgttgtttct tcaattttga acgacgatcg caaaggcaga aaaaatggtc
     5461 ggggtttcta tctttatggt cagaaagggc gtaaaagcaa aaaacaggtc gatcccgcca
     5521 tttacccgct cattggcgca caagggcagg ggcgactctc cgcaccgcag gtttctgaac
     5581 ggtgtgtgat gttgatgctg aatgaagcag tacgttgtgt tgatgagcag gttatccgta
     5641 gcgtgcgtga cggggatatt ggtgcggtat ttggcattgg ttttccgcca tttctcggtg
     5701 gaccgttccg ctatatcgat tctctcggcg cgggcgaagt ggttgcaata atgcaacgac
     5761 tggccacgca gtatggttcc cgttttaccc cttgcgagcg tttggtcgag atgggcgcgc
     5821 gtggggaaag tttttggaaa acaactgcaa ctgacctgca ataagaaggt caaagctata
     5881 tgaatccacg ctgaatggcg gagtattggt caaaatgtaa acgcatattg actatactta
     5941 cgccattgag gtaaaaaaca gcgtttcatt cggtgaatgg ataaggcaca atgccggcca
     6001 ccgttttctt tctctggttt cagatgaaag aaaatgggcg aatctggtta acaaaagcgg
     6061 tgcaatatgc aagtttttat catgcgtcac ggcgacgcag ccctcgatgc cgccagtgat
     6121 tcggttcgtc ctctgaccac taatggttgt gacgaatctc gcctgatggc gaactggctg
     6181 aaaggtcaaa aagtggaaat cgaacgcgtt ctggtgagcc cgttcctgcg agccgagcaa
     6241 acactggaag aagtagggga ttgtctgaac ctgccttcca gtgcagaagt tctgccggag
     6301 ttaacgccct gcggcgatgt tggtctggtc agtgcctatt tgcaggcgtt gaccaatgaa
     6361 ggtgttgctt cggtactggt gatctctcac ttaccgttag tcgggtatct ggttgccgag
     6421 ttatgtccgg gcgaaacgcc gcctatgttt accacctcgg ccattgccag cgtaacgctt
     6481 gatgaaagcg gaaacggtac attcaactgg cagatgagcc cgtgtaatct gaagatggca
     6541 aaagctatct gatgtgttcc aaattatgcc caatgaggta gattcattgg gcataattgc
     6601 tcatcaggca gcggatatct gtcaacctca ctactatcga agactctcct tatctataaa
     6661 taaaacactt tctacattca ttcggaaatt attcttctgc acgtatcttg attttgccca
     6721 aagttacatg ttgaaatgaa taatgtctgt ttgacactca ttgtcattta ttaatacaga
     6781 taatagagtt gaataatcag gcaggatgta attgaaactt gattaaattc tggctatagt
     6841 gtttatatat tatattgtca aaagtggata aatgccaatc gcattatatg ttcattgttt
     6901 gttttttaag ctgttgatat tcattattga tatactttct attttttcta aatacttatt
     6961 ccgtattttt taaggatgtc cttaagataa tctttcttct gtcaatatat taattaaatc
     7021 tacatttact ctttagtaaa attaaattgc atcaggggtg tggaaacatc actatgcggc
     7081 cccacaccaa cgaatacaat tttctacgac ctgttctttt tggatcgcat gccgtattca
     7141 atggctgggt ataaacattg gctattgact gaatcaatgt attgcaatgt ttatattttt
     7201 aattatttat agtttaagga caaataatga gtaagtttgt taaaacagct attgctgcgg
     7261 caatggtgat gggcgtgttc acctctacgg caacaatcgc tgcgggtaac aacggtactg
     7321 cacgttttta cggcaccatt gaagactcag tgtgttctat cgttccggac gatcacaaac
     7381 tggaagttga tatgggtgat atcggtgccg aaaaactgaa aaataacggc accaccacgc
     7441 cgaaaagttt ccagattcgt ctgcaagatt gcgtatttga tacttaggaa acaatgacca
     7501 ctacctttac tggtaccgtt tcttctgcaa atagcggcaa ttattacacc attttcaata
     7561 ccgataccgg tgcggcattt aacaatgtta gcctggcgat cggtgactct ctgggtacct
     7621 cttacaaaag cggcatgggt attgaccaga aaatagtgaa agacacttct actaataaag
     7681 gcaaagcgaa gcagacactg aactttaaag cctggctggt cggcgcagct gatgcgccag
     7741 atctgggtaa tttcgaagca aataccacct tccagattac ttacctgtaa ggcatacccc
     7801 catagcgaca ctgctatggg ggatttaaat ggattttgac cgaacaagaa taaaaacgga
     7861 tagaaacgtg tatgcctgac cattctcttt ttcgattacg gattcttccg tggtgcattg
     7921 cgctggcaat gtcagggagt tatagcagtg tctgggctga agacgacatt cagtttgatt
     7981 cccgttttct ggaattaaaa ggcgacacaa aaattgatct gaagcgtttt tccagccagg
     8041 gatatgttga gcccggaaaa tacaatttac aggttcaact aaataaacag ccattggcgg
     8101 aagagtacga tatttactgg tatgctggtg aagatgacgc gagcaaaagc tatgcttgtc
     8161 tgacaccgga actggtagcg cagtttggtt taaaagaaga cgtggcgaaa aatctgcaat
     8221 ggagccacga tgctaaatgc ctgaaatccg gtcaactgga aggcatggaa attaaggctg
     8281 atttaagcca gtccgcatta gtcatttcac tgccacaggc ttacctcgaa tatacttatc
     8341 ccgactggga tccgccttca cgttgggatg acggcatctc cgggatcgtc gcggactaca
     8401 gcatcaacgc acaaacccgg cacgaagaaa atggcggtga tgatagtaac gagatcagcg
     8461 gcaacgggac ggtcggggtt aacctggggc cgtggcgtat gcgtgctgac tggcagacta
     8521 actatcaaca tactcgcagt aatgatgacg atgaattcag cggcgatgaa actcaaaaaa
     8581 aatgggagtg gagtcgctac tatgcctggc gggcgttacc atcattaaaa gccaaactgg
     8641 cgctgggcga ggattacctc agatccgata tttttgatgg ttttaactat gttggtggta
     8701 gtgtcagtac tgacgatcaa atgttgcctc ccaatctgcg cggctacgcg ccagacattt
     8761 ccggcgtggc acacaccaca gcaaaagtga ccgtcagcca gatggggcgt gtgatttacg
     8821 aaacgcaggt tccggctgga ccgtttcgta ttcaggatct tggtgattct gtctccggta
     8881 cgttgcatat tcgcattgaa gaacagaacg gccaggtgca ggaatatgac atcagcaccg
     8941 cctcgatgcc atacctcact cgtccaggtc agattcgcta taagatcatg atgggccgtc
     9001 cgcaagagtg gggacaccat gtcgagggtg aatttttttc tggtgctgaa gcttcctggg
     9061 ggatcgctaa cggctggtcg ttatatggcg gcgcactggg agatgaaaac tatcagtctg
     9121 cggcgcttgg cgtcggtcgc gatttgtcta cattcggcgc ggtcgcgttt gatgttactc
     9181 actcgcacac caaactggat aaagacaccg cttatggcaa aggttcgctg gacggtaact
     9241 ccttccgtgt gagttattcc aaagactttg accagctcaa cagccgcgtt acttttgctg
     9301 gatatcgctt ctcggaagag aactttatga ccatgagcga gtatctggat gccagtgaca
     9361 gcggaatggt acgcacgggc aacgacaaag agatgtgcac cgccacttat aaccagaact
     9421 tccgcgatgc gggtgtttcg gtttatctca actatacccg ccatacctac tgggatcgcg
     9481 aggagcagat aaactacaac atcatgctct cgcactattt caatatgggc agtattcgta
     9541 atgtcagcat ctcgatgact ggctaccgtt acgagtatga caaccaggcc gacaaaggca
     9601 tgtacatttc gctcagtatg ccgtggggcg acaacagtac cgttagctat aacggtaact
     9661 atggcagtgg gacggacagc agtcaggtcg gttatttcag ccgtgtcgat gacgcgactc
     9721 actatcagtt gaacgtcggc accagtgaca aacacaccag cgttgacggc tattacagcc
     9781 atgatggttc gctggcgcag gttgacctca gtgcgaacta ccatgaaggg caatacacct
     9841 ctgcgggctt gtcgttacag ggcggcgcaa cgcttactgc ccacggtggc gcacttcacc
     9901 gtacccagaa tatgggcggg acacgcttgt tgattgatgc cgatggcgtt gccgatgttc
     9961 cggtggaagg taacggggct gctgtttata ccaatatgtt tggtaaagcc gtcgtttctg
    10021 acgtcaataa ctattaccgc aatcaggcgt atatcgacct caacagattg cctgaaaacg
    10081 ctgaagcaac ccagtcggtg gtgcaagcca cgctaactga aggtgccatt ggctaccgta
    10141 aatttgctgt cattagcgga caaaaagcga tggcggtgct gcgcctgagc gacggcagcc
    10201 atcctccgtt tggcgcagaa gtaaaaaatg ataacgagca gacagtgggc cttgtcgatg
    10261 atgacggcaa tgtttatctg gctggggtga aacctggcga acacatgagt gtgttctgga
    10321 gtggtgttgc gcattgcgat atcaacctgc cggacccgct gcctgccgat ctgtttaacg
    10381 gcttgttact accatgccag cataaaggca atgtagcacc tatcacttcg ccggcggtca
    10441 aaccggcgat tcaggaacag acacagcggg tgacgccaac ggaacctccg acttcaattt
    10501 cagtaaacca gtaacgtgat taaggaatga tccatgttta atctgactaa cactgcaaaa
    10561 atcgttgtcc cggcactggc gctgctggcg acagcggtca gtttctccag ccacgcttcg
    10621 gtgacgcccg acaggacacg gctggtgttt aacgaaagcg acaagtccat cagcgtcacg
    10681 ctgcgcaaca acgatcccac actgccttat ctggcgcaga gctggataga ggatgcaaag
    10741 ggcaacaaaa tcagctctcc gcttgcggtg cttccgccag tgcagcgcat cgatgcgatg
    10801 atgaacggcc aggtgaaggt gcaggggctg ccggatatca acaaactgcc ggccgaccgc
    10861 gagagcgtgt tctatttcaa cgtgcgcgaa atttcgccga aatcaaataa accgaacaca
    10921 ctgcagattg cgctgcagac gcgtatcaaa ctgttctggc gaccgaaggc gctggagaac
    10981 accagcatga aaagtccgtg gcagcataag gtgacgctca tccgtaacgg ccaggacttc
    11041 accgtcaata acccgacgcc gtactacgtg atcatcagca acgccagcgc taaaaaaggc
    11101 ggcaacccgc cggcgggatt cacaccgctg atgatggagc cgaaaacctc cgcaccgctg
    11161 aatgcgaaga tggacagcgt gccggtgctg acttacatca acgactacgg cgcgcggatg
    11221 ccgctgtact tcaaatgcac cggcaacagc tgccaggtgg atgaagagca gagccgcaaa
    11281 ggctgatgcc gggagggact tatgagtcac aagtttgtag cgggcgcagg gttgctggtg
    11341 ctggccggat ggggcatcag cggtttggct gttgctggca gtgatatcaa acaggtggat
    11401 ctgacgctgc gaatcctagt cgatggaccg ccgccttgct ccgtgaaggg aagcgctgtg
    11461 aaatttggca atgtgataat caacaggatc gatggtacca attaccaaca ggatgcgaaa
    11521 tacaccctca actgcggtaa taaagtcagc gatgacttac ggatgcagct caaaggcaat
    11581 accgccgtga tcaacggaga aacggttctc agcacggata tcgccggcct gggggtgcgg
    11641 atagaaaacg ccgccgacaa ctccctgttt gcagttggtg aaaataactg gacgcctttt
    11701 aatgtcaaca ctcagcctca gctgaaagcg gtgccggtaa aacagagcgg ggtgcaactg
    11761 actccgtcgg agtttaacgc cacgatgacc atggtggtgg attaccaatg aaaaaattcc
    11821 tgctcctttt actgtgcgct ggttgcgggg ctgtgctggc ggcggaagat gacatcacat
    11881 tccacggtac gctgatgtcg ccgcccgcct gtagcatcag cggcgggcaa accatcgaag
    11941 tgcaatttcg cgatctcatt atcgacagca ttgatggcaa ttatggtcgt cagaaagtgg
    12001 actacgaact gagctgcgac tcggatgtcc gcgatcccga gtggaatatg acactctcct
    12061 ggacggggac tgccacctcc tacaacgact ctgctattga gacggatgta ccgggcttcg
    12121 gaattgagct tcagcatgac ggtcagcgtt ttaagctcaa cgagccgctt tccattaacg
    12181 ccaccgattt tagccagaag ccaaagctgg aggcggtacc ggtcaaagcg gctgatgcgg
    12241 tgctgacgga cacgaccttt tctgcttacg caaccttacg ggtggattac caatgaaaac
    12301 agcacacatt tattcacccg gttatgcgct gttagcaggc ctgctgctga ccgccagcac
    12361 aggagcacag gcagtcgaca acaacctgca tttttacggc aacctgctga gtaaatcctg
    12421 cacgctggtg gtggatggtg ccaacctggc agaaatccat tttcccaccg tcagcaaccg
    12481 ggatttgatg gtatctgggc agtccgcgca tctgccggtt gtgtttaagc tgaaagactg
    12541 caaagggccg gcgggataca acgtcaaagt cacgctgagc ggcaccgaag acagcggtca
    12601 gccgggtttt ctggcagtcg atgacacctc caccgcgcag ggcgtgggga tagggatgga
    12661 aacgctcgac ggcaagcggg tggatattaa caacaccacc ggggcgacct ttgcgcttac
    12721 caacggcaac aatgatatta atttccgggc ctggatctag gcgaaaagcg gtcgtgatgt
    12781 aaccatcggt gatttcaccg ccagcctgac agcaactttt gagtatattt aaaatgaaaa
    12841 tccttcgtca tgttttatgt cttttattgc tgttaatgtt caatacatgc ggccaggcgg
    12901 cgacgaaagt tggtgagtta tatgtgccag ctggtgccag ttcacctgcg ac
//
LOCUS       DAJVUK010000123        12914 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.123, whole genome shotgun sequence.
ACCESSION   DAJVUK010000123 DAJVUK010000000
VERSION     DAJVUK010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12914
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.123"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..880)
                     /gene="rarD"
                     /locus_tag="OQQ57_003139"
     CDS             complement(<1..880)
                     /gene="rarD"
                     /locus_tag="OQQ57_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HCS1957810.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIA
                     AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI
                     WVALAIFVMDAIYTQRR"
     gene            complement(932..1399)
                     /locus_tag="OQQ57_003140"
     CDS             complement(932..1399)
                     /locus_tag="OQQ57_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312777.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HCS1957811.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG"
     gene            1564..2433
                     /gene="pldA"
                     /locus_tag="OQQ57_003141"
     CDS             1564..2433
                     /gene="pldA"
                     /locus_tag="OQQ57_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HCS1957812.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            2566..4395
                     /gene="recQ"
                     /locus_tag="OQQ57_003142"
     CDS             2566..4395
                     /gene="recQ"
                     /locus_tag="OQQ57_003142"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HCS1957813.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMCKLERFGKPFMALIRAHVDGDDEE"
     gene            4459..5079
                     /gene="rhtC"
                     /locus_tag="OQQ57_003143"
     CDS             4459..5079
                     /gene="rhtC"
                     /locus_tag="OQQ57_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HCS1957814.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAP
                     APQIELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVET
                     LAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(5141..5761)
                     /gene="rhtB"
                     /locus_tag="OQQ57_003144"
     CDS             complement(5141..5761)
                     /gene="rhtB"
                     /locus_tag="OQQ57_003144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HCS1957815.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     ASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDII
                     VMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            5872..6894
                     /gene="pldB"
                     /locus_tag="OQQ57_003145"
     CDS             5872..6894
                     /gene="pldB"
                     /locus_tag="OQQ57_003145"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HCS1957816.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            6902..7702
                     /gene="yigL"
                     /locus_tag="OQQ57_003146"
     CDS             6902..7702
                     /gene="yigL"
                     /locus_tag="OQQ57_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HCS1957817.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            7778..8677
                     /gene="bioP"
                     /locus_tag="OQQ57_003147"
     CDS             7778..8677
                     /gene="bioP"
                     /locus_tag="OQQ57_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HCS1957818.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMNKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTLITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(8565..9518)
                     /gene="metR"
                     /locus_tag="OQQ57_003148"
     CDS             complement(8565..9518)
                     /gene="metR"
                     /locus_tag="OQQ57_003148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HCS1957819.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     VTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            9754..12015
                     /gene="metE"
                     /locus_tag="OQQ57_003149"
     CDS             9754..12015
                     /gene="metE"
                     /locus_tag="OQQ57_003149"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HCS1957820.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDGVAEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            complement(12300..12545)
                     /locus_tag="OQQ57_003150"
     CDS             complement(12300..12545)
                     /locus_tag="OQQ57_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCS1957821.1"
                     /translation="MITETEINVLKVMAEKDINWNWMNLDRTLSIRQIPGFGNVVNIV
                     NKLANEGLVIIEDSGHKSMPHYHVTEKGYNFVKSENK"
     gene            complement(12535..>12914)
                     /locus_tag="OQQ57_003151"
     CDS             complement(12535..>12914)
                     /locus_tag="OQQ57_003151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957822.1"
                     /translation="FNPDLAGGPIENLTTDGVTINREGIAIVEKHIARFGHDPINEVM
                     INRLKDIEKGKIPPEQVDLNFYTHECREYQRYCNLGWETGQPDGDAGYALWNHTHTAT
                     LEDYKLKGELNDLYHQDALDYDN"
BASE COUNT         3051 a         3261 c         3442 g         3160 t
ORIGIN      
        1 ttctacgctg cgtataaatc gcatccatca caaaaattgc cagcgccacc caaataaagg
       61 cgaaggtcac catcttatcg gcacccggtt tttcaccata aaacgtcact gccaacagga
      121 acatcagcgt cgggccaata tactggaaga agcctaacgt ggagagacgc aggcgtgtag
      181 cagctgcggt aaaacacaac agcggtacgg tggtgacaat accggcggcg atcagcagca
      241 aattcagcaa catcgggttt tgccccatat ggctggttga gctgtcggca atagcaaaca
      301 gataaatcgc cgccacgggc agcagccaca tggtttcgat taacatgccg gtttgcgctt
      361 caacggcaat tttcttgcgt accagtccgt agaaggcaaa actaaacgcc agccccagcg
      421 cgatgattgg cagcgaacca aaagtccaca actgaaccaa cacgccacat atcgccagaa
      481 tcaccgccag ccattgcatc cggcggaatc gctcgccgag gaaaatcatc cccagcacaa
      541 tgttcaccag cgggttaata aagtaaccaa ggctcgcttc cagcatatgg tgattgttca
      601 ccgcccagat aaacagtagc cagttgccac caatcagcac ggcagagact gccagcataa
      661 aaattttctg tggcgtctga atcagcgttt ttaaatagga ccactggcgg caaatgctca
      721 tcagcaccac cataaagaaa aacgaccaga tcacgcgatg cgtcaggatc tcatcggcgg
      781 gcacgtagta aatcagcttg aagtatgctg gcgcaatacc ccaaataaaa taagcggcaa
      841 gagcgagtaa tacgccctgc cgcgtttgtt ttgcatccat cgggaatact catttttaat
      901 tggtaacagc agtttacctg cttttatgtc ttcaacctac catataggtg gcggtggcac
      961 tggcaatata aagctgttct tcattgtgta attcaacgcg ggcgacggcg actttattgc
     1021 ctgcacgcaa caggctactg gtagcagtaa aacgctcgcc cctgcctggg cgcagataat
     1081 caacgcgaag atcaatggtc cccatccgcg atagccgctg gcgtagttca tcttcactga
     1141 tggtttcgtg gcgggttaag gtacttccca cgcacaccag accggcggcg acatccagcg
     1201 ccgacgcaat gactccgccg tgcaaaatgc tttgcgccca gttacccacc atcatcggct
     1261 gatttttaaa ggccagctgt gcgaactctt tttcgtaacg ctccagctcc atccctaacg
     1321 cgcggttaaa tggcatgtga taaacaaaca tctcacccac taatttcagg gcttgttcag
     1381 cggtcagtac ggcagacata tcatccttac acttcattgg ttaatgaaat gttgatttta
     1441 tgcttctttg ttgttggttt ctactttagg aagggataac taacggcaat ggagttaagt
     1501 atgtaaaata gcccgcagaa aaacattcac cttatcaata attcgttacg gagaacacga
     1561 ccgatgcgga ctctgcaggg ctggttgttg ccggtgttta tgttgcctat ggcagtatat
     1621 gcacaagagg caacggtgaa agaggtgcat gacgcgccag cggtgcgtgg cagtattatc
     1681 gccaatatgc tgcaggagca tgacaatccg ttcacgctct atccttatga caccaactac
     1741 ctcatctaca cccaaaccag cgatctgaac aaagaagcga ttgccagtta cgactgggcg
     1801 gaaaatgcgc gtaaggatga agtaaagttt cagttgagcc tggcatttcc actgtggcgt
     1861 gggattttag gcccgaactc ggtgttgggt gcgtcttata cgcaaaaatc ctggtggcaa
     1921 ctgtccaata gcgaagagtc ttcaccgttt cgtgaaacca actacgaacc gcaattgttc
     1981 ctcggttttg ccaccgatta ccgttttgca ggttggacgc tgcgcgatgt ggagatgggg
     2041 tataaccacg actctaacgg gcgttccgac ccgacctccc gcagctggaa ccgcctttat
     2101 actcgcctga tggcagaaaa cggtaactgg ctggtagaag tgaagccgtg gtatgtggtg
     2161 ggtaatactg acgataaccc ggatatcacc aaatatatgg gttactacca gcttaaaatc
     2221 ggctatcacc tcggtgatgc ggtgttgagt gcgaaaggac agtacaactg gaataccggt
     2281 tacggcggcg cggagttagg cttaagttac ccgatcacca aacatgtgcg cctttatact
     2341 caggtttaca gcggctatgg cgaatcgctc atcgactata acttcaacca gacccgtgtc
     2401 ggtgtaggag ttatgctaaa cgacttgttt tgatgaacgg ttgagtggtt ggcaaatctg
     2461 gaacccagca tccaggatta ccctctcaga gactaaaagc attgcagttt ctcgcgcagg
     2521 cgctgaaaat agcgcctgtt tttatttcag gcaatcgggg tgaatgtggc gcaggcggaa
     2581 gtgttgaatc tggagtccgg agctaaacag gttttacaag aaacctttgg ctaccaacag
     2641 tttcgccccg gccaggaaga aattatcgac actgtgcttt ccggtcgcga ttgcctggtc
     2701 gtcatgccca ccggtggcgg aaaatccctt tgctatcaaa ttcctgcctt attgctaaac
     2761 ggccttaccg tggttgtttc accgctgatt tcgttgatga aagatcaggt ggatcaactg
     2821 caagccaacg gcgtggcggc ggcgtgcctt aactcgacgc aaacccgcga gcagcaactt
     2881 gaagtgatga caggctgccg caccgggcaa attcgtctgc tttatatcgc cccggaacgc
     2941 ctgatgctgg ataactttct tgagcatctg gcgcactgga atccggtgtt attagccgtt
     3001 gatgaagcgc actgtatctc ccaatggggc cacgatttcc gcccggaata tgccgcgctt
     3061 ggtcagttac gccagcgttt cccgaccctg ccgtttatgg cgctgactgc cacagccgac
     3121 gacaccacgc gccaggatat cgtgcgcttg ctggggctga acgatccgct gattcaaatc
     3181 agcagttttg accgtccgaa tattcgctac atgctgatgg agaagttcaa accgctcgat
     3241 cagttgatgc gctacgtgca ggaacagcgc ggtaagtcag gcattatcta ctgcaacagc
     3301 cgcgcgaaag tagaagacac cgctgcgcgc ctgcaaagca agggaattag cgcggcggcc
     3361 tatcatgctg ggctggaaaa taatgttcgc gccgacgtgc aggaaaaatt tcagcgcgat
     3421 gacctgcaaa ttgtggtggc gacggtggcg ttcggcatgg gcatcaataa accaaacgtt
     3481 cgcttcgtgg tccactttga tattccgcgc aatatcgaat cctattatca ggaaaccggt
     3541 cgcgccgggc gtgatggcct gcccgcggaa gcgatgctgt tttacgatcc ggccgatatg
     3601 gcgtggctgc gccgttgcct ggaagagaag ccgcaggggc agttacagga tatcgaacgt
     3661 cataaactca atgcgatggg cgcttttgcc gaagcgcaaa cttgccgtcg tctggtattg
     3721 ctgaactatt ttggcgaagg gcggcaagag ccgtgcggga actgcgatat ctgcctcgat
     3781 ccgccgaaac agtacgacgg ttcaaccgat gctcagattg ccctttccac cattggtcgt
     3841 gtgaatcagc ggtttgggat gggttatgtg gtggaagtga ttcgtggtgc taataaccag
     3901 cgtatccgcg actatggtca tgacaaactg aaagtctatg gcatgggccg tgataaaagc
     3961 catgaacatt gggtgagcgt gatccgccag ctgattcacc tcggcctggt gacgcaaaat
     4021 attgcccagc attctgccct acaactgaca gaggccgcgc gcccggtgct gcgcggcgaa
     4081 tcctctttgc aacttgccgt gccgcgtatc gtggcgctca aaccgaaagc gatgcagaaa
     4141 tcgttcggcg gcaactatga tcgcaaactg ttcgccaaat tacgcaaact gcgtaaatcg
     4201 attgccgatg aaagtaatgt cccgccgtac gtggtgttta acgacgcaac cttgattgag
     4261 atggctgaac agatgccgat caccgccagc gaaatgctca gcgttaacgg cgttgggatg
     4321 tgcaagctgg aacgctttgg taaaccgttt atggcgctga ttcgtgcgca tgtcgatggc
     4381 gacgacgaag agtagtcagc agcataaaaa agtgccagga tgaagactcc gtaaacgttt
     4441 cccccgcgag tcaaatgtat gttgatgtta tttctcaccg tcgccatggt gcacattgtg
     4501 gcgcttatga gccccggtcc cgatttcttt tttgtctctc agaccgctgt cagtcgttcc
     4561 cgtaaagaag cgatgatggg cgtgctgggt attacctgcg gcgttatggt ttgggcaggg
     4621 attgcgttgc ttggcctgca tttgattatc gaaaaaatgg cctggctgca tacgctgatt
     4681 atggttggcg gtggcctgta tctctgctgg atgggttacc agatgctacg cggtgcactg
     4741 aaaaaagagg ctgtatctgc gcctgcacca cagattgagc tggcgaaaag cgggcgcagt
     4801 ttcctgaaag gtttactgac caatctcgct aatccgaaag cgattatcta ctttggctcg
     4861 gtgttctcat tgtttgtcgg tgataacgtt ggcactaccg cgcgctgggg catttttgcg
     4921 ctgatcattg tcgaaacact ggcgtggttt accgtcgttg ccagcctgtt tgccctgccg
     4981 caaatgcgcc gtggttatca acgtctggcg aagtggattg atggttttgc cggggcgtta
     5041 tttgccggat ttggcattca tttgattatt tcgcggtgat gccagacgcg tcttcagagt
     5101 aagtcggata aggcgtttac gccgcatccg acattatttt tcacgcatgc ctcgccgatg
     5161 ctaacagcgc tcccaccagc ataaacaacg agccgaaaat cttattcagc gccttcatct
     5221 gctttggtcc tttaatccat agagcaatcc gttgagcaag ggtggcgtaa ccgatcatca
     5281 caataatatc gactacaata gtggtgacgc cgagcacgat atactgcatc agttgcggct
     5341 gctgtggcat gatgaattgc ggaaatagcg ccgccagaaa cacaatactt ttgggattgg
     5401 tgagattcac aaaaactgcg cgctggaaca aatgtcgacg cgattgagta gaggccagcg
     5461 atttaaggtc aattgcacca gcggcgcgcc actgctggat tcccagccaa atcaagtaag
     5521 ccgcgcctgc ccacttcaac acttcaaacg caatcactga gcgggaaaat agcgtcccca
     5581 aacccacgcc aaccagcaca atatgaatcg ccagtccggt ctgaagccca gcaatagacg
     5641 ccaccgcgcc gcgataaccg tggttgagcg aggtggtcat agtgttgatt gcaccagagc
     5701 ctggcgacag gcttaaaatg atcgatgtca gcaggtaggc aaaccaccat tctaaggtca
     5761 tgatgaactc ccggtgtgtc tatttttgtg ccacaatacg ctactgtcgc agcgttgtgt
     5821 caggcacgct aaaaaaaacg attttacgtg gtttaagagg cagattaccc gatgtttcag
     5881 cagcaaaaag actgggaaac aagagaaaac gcgtttgctg cttttaccat gggaccgctg
     5941 actgatttct ggcgtcagcg tgatgaagca gagtttactg gtgtggatga cattccggtg
     6001 cgctttgtcc gttttcgcgc acagcaccat gaccgggtgg tagtcatctg cccggggcgt
     6061 attgagagct acgtaaaata tgcggaactg gcctatgacc tgttccattt ggggtttgat
     6121 gtcttaatca tcgaccatcg cgggcaggga cgttccggtc gcctgttagc cgatccgcat
     6181 ctcgggcatg ttaatcgctt taatgattat gttgatgatc tggcggcatt ctggcagcag
     6241 gaggtccagc ccggtccgtg gcgtaaacgc tatatactgg cacattcgat gggcggtgcg
     6301 atctccacat tatttctgca acgccatcca ggtgtatgtg acgccattgc gctaactgcg
     6361 ccaatgtttg ggatcgtgat tcgtatgccg tcatttatgg cacggcagat cctcaactgg
     6421 gccgaagcgc atccacgttt ccgtgatggc tatgcaatag gcaccgggcg ctggcgcgcg
     6481 ttgccgtttg ctatcaacgt actgacccac agcagacagc gatatcgacg taacttacgc
     6541 ttctatgctg atgacccaac gattcgcgtc ggtgggccga cctaccattg ggtacgcgaa
     6601 agtattctgg ctggcgaaca ggtgttagcc ggtgcgggtg atgacgccac gccaacgctt
     6661 ctcttgcagg ctgaagagga acgcgtggtg gataaccgca tgcatgaccg tttttgtgaa
     6721 ctccgcaccg ccgcgggcca tcctgtcgaa ggaggacggc cgttggtaat taaaggtgct
     6781 taccatgaga tcctttttga aaaggacgca atgcgctcag tcgcgctcca cgccatcgtt
     6841 gattttttca acaggcataa ctcacccagc ggaaaccgct ctacagaggt ttaaatttct
     6901 tatgtaccag gttgttgcgt ctgatttaga tggcacgtta ctttctcccg accatacgtt
     6961 atccccttac gccaaagaaa ctctgaagct gctcaccgcg cgcggcatca actttgtgtt
     7021 tgcgaccggt cgtcaccacg ttgatgtggg gcaaattcgc gataatctgg agattaagtc
     7081 ttacatgatt acctccaatg gtgcgcgcgt tcacgatctg gatggtaatc tgatttttgc
     7141 tcataacctg gatcgcgaca ttgccagcga tctgtttggc gtagtcaacg acaatccgga
     7201 catcattact aacgtttatc gcgacgacga atggtttatg aatcgccatc gcccggaaga
     7261 gatgcgcttt tttaaagaag cggtgttcaa atatgcgctg tatgagcctg gattactgga
     7321 gccggaaggc gtcagcaaag tgttcttcac ctgcgattcc catgaacaac tgctgccgct
     7381 ggagcaggcg attaacgctc gttggggcga tcgcgtcaac gtcagtttct ctaccttaac
     7441 ctgtctggaa gtgatggcgg gcggcgtttc aaaaggccat gcgctggaag cggtggcgaa
     7501 gaaactgggc tacagcctga aggattgtat tgcgtttggt gacgggatga acgacgccga
     7561 aatgctgtcg atggcgggga aaggctgcat tatgggcagt gcgcaccagc gtctgaaaga
     7621 ccttcatccc gagctggaag tgattggtac taatgccgac gacgcggtgc cgcattatct
     7681 gcgtaaactc tatttatcgt aatcgttctt tatttggtca gttgtcaacc tgatacttcg
     7741 ctacaatgga tactcgttaa tcaaagagtt ttccattgtg gcgctactta tcatcaccac
     7801 gattctgtgg gccttctcct ttagctttta tggcgagtac cttgcggggc acgtcgatag
     7861 ctattttgcg gtgctggtgc gcgttggcct ggcggcactc gtttttctgc cgtttctgcg
     7921 tacccgtggc aatagcctga aaacagtcgg cctgtatatg ctggtgggcg cgatgcagct
     7981 cggcgtgatg tatatgctga gtttccgcgc ttatctctat ctgacggttt ccgaactgct
     8041 gctgttcacc gtactgacgc cgctctacat cacgctgatt tatgacatca tgaataagcg
     8101 ccgtctgcgc tggggatatg cttttagtgc cttgttggcg gtgattggtg ccgggattat
     8161 tcgctatgat caggtcaccg accatttctg gactggcttg ttgctggtgc aactctccaa
     8221 tatcactttt gccatcggca tggtgggtta caaacgcctg atggaaactc gcccgatgcc
     8281 gcagcataac gcctttgcgt ggttctatct tggcgcgttc ctggtggcgg taattgcatg
     8341 gttcttgctg ggaaatgcgc agaaaatgcc gcaaaccacg ttgcaatggg gcattctggt
     8401 gtttcttggc gtggtggctt ccgggattgg ctactttatg tggaactacg gcgcgacgca
     8461 ggtggacgcc ggaacgctgg gaattatgaa taatatgcac gttccggcag ggctgctggt
     8521 aaacctggct atctggcacc aacagccgca ctggccaacg ttgattacag gcgcgctggt
     8581 gatcctggcc tcactgtggg tgcatcgtaa gtgggtcgct ccgcgctctt cacaaacggc
     8641 agatgatcgc aggcgtgatt gcgcgctgag cgaataaacg cttccgtaac tggctgacgc
     8701 tgctcgccat cgcgcacggc ggcgtacagt cggctccaca agccttcgcc cagggttttg
     8761 gtcaccacca gaccctggcg ctcaaaactc tctactaccc aatgcggtag cgcggcaata
     8821 cccatccgcg cggcaaccat ctgaatcaac aataaggtgt tatcgacgct tttcagtgac
     8881 ggactgacgc ctgccggctg aagaaaatgc cgccagacat ccagtcgact acgctgcacc
     8941 ggataaatta atagcgtctc gctggcgaga tcttccggtg taatacgcgt ttttgccgcc
     9001 agtggatggt caggtgctaa caccagacgc acttcatagt cgaacatcgg cgaataatgc
     9061 agaccactgc gcggcagaat atcggacgtc attaccagat ccagctctcc ctgttgcaag
     9121 gcgggctgcg ggtcaaatgt cacgcccgat ttaaagtcca tctcgacctg cggccagttc
     9181 ttatggaaat tttctaacgc gggcgtcagc cactgtatac agctatggca ctcaatggca
     9241 atgcgcagac gcgtctgctg cggttcattg caggcttgca gtgcctggct aatttgtggc
     9301 agcacctggt ttgccagttg caacaggatt tctccctgcg gtgtaaagcg aagcggctgg
     9361 cttttacgca caaatagccg gaagccaagg cgttgttcca gatcgctaaa ctggtgagac
     9421 agggcggatt gcgtttgatg caacgtcgcc gcagcggctg cgagtgagcc gcagttccgc
     9481 aacgcttgta gcgttttcag atgttttact tcgatcatga aagtccttca cttcggcatg
     9541 aataatttgc gcttgaggaa tatacagtaa ccgccaatta tggatgtgta aacatctgga
     9601 cggctaaaat ccttcgtctt ttaaatttat ggtgcgttgg ctgcgtttct ccaccccggt
     9661 cacttacttc agtaagctcc cggggatgaa taaacttgcc gccttcccta aattcaaaat
     9721 ccataggatt tacatataat tagaggaaga aaaatgacaa tattgaatca caccctcggt
     9781 ttccctcgcg ttggcctgcg tcgcgagctg aaaaaagcgc aagagagtta ttgggcaggg
     9841 aactccacgc gtgaagaact gctggcggta gggcgtgaat tgcgtgctcg tcactgggat
     9901 caacaaaagc aagcgggtat cgacctgctg ccggtgggcg attttgcctg gtacgatcat
     9961 gtactgacca ccagtctgct gctgggtaac gttccggcgc gtcatcagaa caaagatggt
    10021 tcggtagata ttgacaccct gttccgtatt ggtcgtggac gtgcgccgac tggcgaacct
    10081 gcggcggcag cggaaatgac caaatggttt aacaccaact atcactacat ggtgccggaa
    10141 ttcgttaaag gccaacagtt caaactgacc tggacgcagc tgctggagga agtggacgag
    10201 gcgctggcgc tgggccacaa cgttaagcct gtgctgctgg ggccggttac ctggctgtgg
    10261 ctggggaaag tgaaaggtga acagtttgac cgcctgagcc tgctgaacga cattctgccg
    10321 gtttatcagc aagtgctggc agaactggag aaacgcggca tcgagtgggt acagattgat
    10381 gaacccgcgc tggtactgga actaccacag gcgtggctgg acgcatacaa acccgcttac
    10441 gacgcgctcc agggacaggt gaaactgctg ctgactacct attttgaagg cgttacgcca
    10501 aatctcgaca cgattactgc gctgcctgtt cagggactgc atgtggacct tgtacatggt
    10561 aaagatggcg ttgctgaact gcacaagcgc ctgccttctg actggctgct gtctgcggga
    10621 ctgatcaatg gtcgtaacgt ctggcgcgcc gatcttactg agaaatatgc gcaaattaag
    10681 gacattgtcg gcaaacgtga tttgtgggtg gcatcttcct gctcgttgct gcacagcccc
    10741 atcgacctga gcgtggaaac gcgtcttgat gcagaagtga aaagctggtt tgccttcgcc
    10801 ttacaaaaat gccatgaact ggcactgctg cgcgatgcgc tgaacagtgg tgacacggca
    10861 gctctggcag agtggagcgc cccaattcag gcgcgtcgtc actctactcg tgtacataat
    10921 ccggcggtag aaaagcgtct ggcggcgatc accgcccagg acagccagcg tgcgaatgtc
    10981 tatgaagtgc gtgctgaagc ccagcgtgcg cgttttaaac tgccagcgtg gccgaccacc
    11041 acgattggtt ccttcccgca aaccacggaa attcgtaccc tgcgtctgga tttcaaaaag
    11101 ggcaatctcg acgccaacaa ctaccgcacg ggcattgcgg aacatatcaa gcaggccatt
    11161 gttgagcagg aacgtttggg actggatgtg ctggtacatg gcgaggccga gcgtaatgac
    11221 atggtggaat actttggcga gcacctcgac ggatttgtct ttacgcaaaa cggttgggta
    11281 cagagctacg gttcccgctg cgtgaagcca ccgattgtta ttggtgacgt tagtcgcccg
    11341 gcaccgatta ccgtggagtg ggcgaagtat gcgcaatctc tgactgataa accggtgaaa
    11401 gggatgctga ctggcccggt gaccattctc tgctggtcgt tcccgcgtga agatgtcagc
    11461 cgtgaaacca tcgccaaaca aattgcgctg gcgctgcgtg atgaagtggc ggacctggaa
    11521 gccgcaggaa ttggcatcat ccagattgat gaaccggcgc tgcgcgaagg tttaccgctg
    11581 cgtcgtagcg actgggatgc atatctccag tggggcgtgg aggccttccg tatcaacgcc
    11641 gccgtggcga aagatgacac acaaatccac actcacatgt gttattgcga gttcaacgac
    11701 atcatggatt ccattgcggc actggatgca gacgtcatca ccatcgaaac ctcgcgttcc
    11761 gacatggagt tgctggagtc gtttgaagag tttgattatc cgaatgaaat cggtccaggc
    11821 gtctatgaca ttcactcgcc aaacgtaccg agcgtagaat ggattgaagc cttgctgaag
    11881 aaagcggcaa aacgcattcc ggcagagcgc ctgtgggtca acccggactg tggcctgaaa
    11941 acgcgcggct ggccagaaac ccgcgcggca ctggcgaaca tggtgcaggc ggcgcagaat
    12001 ttgcgtcggg gatgatgaat attaacgagt cactgtaaat tgcagtacga tgaaagaggc
    12061 aaaactgcct gataccaggc ctacataatt tatgcaattt attgaatttt tgagttttgt
    12121 tggccggaca aggcgttcac gccgcatccg gcatgaacaa cgcgcacttt gccaataatc
    12181 tgatggcttc catcaccgga agccattttg ctatctgcgc ccgttcagat acagaaataa
    12241 ccgaatcatt tttacgcaaa atataatcct gagcgatttg ttcagtaatc aacgctacgt
    12301 tatttattct cacttttcac gaaattgtat cccttttcag taacgtggta gtgaggcata
    12361 gacttatgtc cgctatcctc aataataacc aaaccctcgt tagctaattt gttaacaatg
    12421 ttaacaacat taccgaatcc tggaatttgc cttatggata gtgtgcgatc gagattcatc
    12481 cagttccagt ttatatcttt ctcagccata actttcagta cgttaatttc agtttcagtt
    12541 atcatagtca agtgcatcct ggtggtataa gtcattaagt tctcccttaa gtttataatc
    12601 ttctagagta gcagtatgcg tatgattcca gagtgcatag cctgcgtcac catcaggttg
    12661 tcctgtttcc caaccaagat tacagtaacg ctgatattcc cgacactcat gagtatagaa
    12721 gttaagatct acttgttctg gggggatttt tcctttctca atgtctttca gtctattgat
    12781 catcacttca tttatagggt catgaccaaa tctggctatg tgtttttcaa caatagcgat
    12841 accttccctg ttgattgtta cgccatctgt cgtcagattt tctattggac caccggcaag
    12901 gtcgggatta aatg
//
LOCUS       DAJVUK010000124        12911 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.124, whole genome shotgun sequence.
ACCESSION   DAJVUK010000124 DAJVUK010000000
VERSION     DAJVUK010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12911
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.124"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1568
                     /locus_tag="OQQ57_003152"
     CDS             <1..1568
                     /locus_tag="OQQ57_003152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha amylase C-terminal domain-containing
                     protein"
                     /protein_id="HCS1957823.1"
                     /translation="IRENMSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQ
                     PEDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIR
                     AKISKDIESGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDE
                     WENLHALKEKRLNGMPKTTPKSGQIIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIE
                     RSITPPLKNYNERLHNTNLFNPKYQKKAVMNYMEYLVTCQLDEQQMSSLLYERDDLSA
                     IDFSLLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGNLFNDFL
                     FNHQQDEQLAMAYMAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCST
                     YQQLYNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDSVNINHSPHDGLVIINKGNE
                     EVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALL
                     LGKTGEPPNYLYL"
     gene            1904..2881
                     /gene="csiD"
                     /locus_tag="OQQ57_003153"
     CDS             1904..2881
                     /gene="csiD"
                     /locus_tag="OQQ57_003153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HCS1957824.1"
                     /translation="MNALIAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKPLLNRAEGALLINAVGI
                     DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
     gene            2901..4169
                     /gene="lhgO"
                     /locus_tag="OQQ57_003154"
     CDS             2901..4169
                     /gene="lhgO"
                     /locus_tag="OQQ57_003154"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417146.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HCS1957825.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
                     HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNDIRYDNCGKMLIATSDLEMERM
                     RALWERTAANGIEREWLNAEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQA
                     RGGEIIYNAEVSALSEHKNGVVVRTRQGGEYEASTLISCSGLMANRLVKMLGLEPGFI
                     ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
                     EGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
                     LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
                     VQTLLASQSNPGRTLRATRSVDALHAAFNQ"
     gene            4192..5627
                     /gene="gabD"
                     /locus_tag="OQQ57_003155"
                     /pseudo
     CDS             4192..5627
                     /gene="gabD"
                     /locus_tag="OQQ57_003155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311549.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
     gene            5641..6907
                     /gene="gabT"
                     /locus_tag="OQQ57_003156"
                     /pseudo
     CDS             5641..6907
                     /gene="gabT"
                     /locus_tag="OQQ57_003156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417148.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
     gene            7145..8506
                     /gene="gabP"
                     /locus_tag="OQQ57_003157"
     CDS             7145..8506
                     /gene="gabP"
                     /locus_tag="OQQ57_003157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005114089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
                     /protein_id="HCS1957826.1"
                     /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
                     PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
                     VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
                     IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
                     IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
                     LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP
                     YVAVLLSTGAAFLTVVVNYYVPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
                     GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTDLLAIGIICTVPIMAA
                     GIS"
     gene            8565..9227
                     /gene="csiR"
                     /locus_tag="OQQ57_003158"
     CDS             8565..9227
                     /gene="csiR"
                     /locus_tag="OQQ57_003158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HCS1957827.1"
                     /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGSDEWEA
                     DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(9228..9677)
                     /gene="kbp"
                     /locus_tag="OQQ57_003159"
     CDS             complement(9228..9677)
                     /gene="kbp"
                     /locus_tag="OQQ57_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HCS1957828.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
     gene            complement(9761..9919)
                     /locus_tag="OQQ57_003160"
     CDS             complement(9761..9919)
                     /locus_tag="OQQ57_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HCS1957829.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            10102..10401
                     /locus_tag="OQQ57_003161"
     CDS             10102..10401
                     /locus_tag="OQQ57_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1957830.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            10411..10935
                     /gene="ygaP"
                     /locus_tag="OQQ57_003162"
     CDS             10411..10935
                     /gene="ygaP"
                     /locus_tag="OQQ57_003162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HCS1957831.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDRIDGWKRAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
                     MARLLDKMPWNQRA"
     gene            complement(10982..11386)
                     /gene="stpA"
                     /locus_tag="OQQ57_003163"
     CDS             complement(10982..11386)
                     /gene="stpA"
                     /locus_tag="OQQ57_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HCS1957832.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
     gene            12053..12502
                     /gene="alaE"
                     /locus_tag="OQQ57_003164"
     CDS             12053..12502
                     /gene="alaE"
                     /locus_tag="OQQ57_003164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HCS1957833.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(12539..12883)
                     /locus_tag="OQQ57_003165"
     CDS             complement(12539..12883)
                     /locus_tag="OQQ57_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HCS1957834.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
                     ERYLNGLFGEAS"
BASE COUNT         3221 a         3164 c         3294 g         3232 t
ORIGIN      
        1 aaatcaggga aaatatgtct gagtttgcac gttgccatta tgggtatata caaatccctc
       61 cagtgacaac tttccgcgcc gacggaccag aaactcccga agaagaaaaa ggttactggt
      121 ttcatgctta tcaacccgaa gatctttgta ccatccataa cccaatggga gatttgcagg
      181 attttatcgc attggttaaa gatgctaaaa aatttggtat cgatatcatt cctgattata
      241 catttaactt tatgggaatc gggggtagtg gtaaaaatga cctggattat ccctctgctg
      301 atatacgagc gaagatcagt aaagatatag aaagcggtat ccctggctat tggcaaggtc
      361 aggttttgat tccattcatt aaagatccag taacaaaaga acgtaaacaa atccatccag
      421 aagatataca tctcactgca aaagacttcg aagcaagtaa agataacatc tctaaggatg
      481 aatgggaaaa cctccatgca ttaaaagaaa agcgtttaaa tggaatgcct aaaacaacac
      541 ccaaaagtgg ccagattatt atgttgcaaa atcaatacgt tcgagaaatg cgaaaatatg
      601 gcgtacgagg tttacgttat gatgcggcaa aacactcaaa acatgaacaa atagagaggt
      661 cgataacccc accgcttaaa aattataatg agcggttaca caatactaat ttatttaacc
      721 caaaatatca aaaaaaagcc gttatgaatt acatggaata cctggtaact tgtcagttgg
      781 atgaacaaca aatgtcatca ctgctttatg agagagatga tttaagtgcc attgattttt
      841 ctttactcat gaaaacgata aaagcctttt catttggtgg agatctccaa acccttgcat
      901 caaaaccggg ttccacaatc tcaagtatcc catcagaaag acggatattg attaacatta
      961 accacgattt tcctaacaat ggtaatcttt tcaatgactt tctatttaac catcaacaag
     1021 atgaacaatt agcaatggca tatatggccg ctctcccgtt cagcagacct ttagtttact
     1081 gggatggcca agtattaaaa tcaacgactg aaattaaaaa ttatgatggg tccacgcgtg
     1141 tcggcggtga ggcgtggctt aataaaggtt gctctaccta tcagcagctc tacaatgaat
     1201 tccacgcatt atatatagat aaagcaggaa tatggagcgc atttgagggt gtatttgcaa
     1261 ctaaaaacgt tctggccttt agtcgtgggg attctgtgaa cattaatcac tctcctcatg
     1321 atgggctagt tataataaat aaaggaaacg aagaagttga aggtacctgg cctaacaaat
     1381 tgcaacctgg aatatacaaa aacatgggga gtaatagcgt taacattatt attaataata
     1441 cccgaaaaat tatcccccct ggtaaagtat ttacgcttag aggcggaact ctaaatatca
     1501 atattcctgg gcgtagcgct cttcttttag ggaaaacagg agaaccgccg aactatctct
     1561 atttataatt taatgttata tctgccccga taaaacgggg cagataatat gtttagttta
     1621 ctaacggtca ttttgcagtg aagccattta ctgtttttta tcgaccagat aatctgttct
     1681 ctaatgttaa ctccccctaa cctgttgctt tagttattca tttcctgtct cactttgcct
     1741 taatacccta cgttaaatgt tactaatttg ttgtttttga tcacaataag aaaacaatat
     1801 gtcgcttttg tgcgcatttt tcagaaatgt agatattttt agattatggc tacgaaatga
     1861 gcatcgccat gtcaccctac atctcataag aggatcgctt ctgatgaatg cactgatcgc
     1921 cgtacaaaat aacgctgtcg attcaggcca ggactatagc ggattcactc tcatcccgtc
     1981 ggcgcaatcc ccgcgtctgc tggaactcac cttcaccgaa cagacgacca aacagtttct
     2041 cgaacaggtt gccgaatggc ccgtgcaggc gctggagtac aaatcgtttc tgcgttttcg
     2101 ggtaggcaaa attcttgacg atctgtgtgc gaatcagctg caaccattgc tgttgaagcc
     2161 cctgctaaac cgtgctgaag gtgcgctgtt gatcaatgcg gtgggtatcg atgatgtggc
     2221 gcaggcagat gagatggtga agctggcaac ggcggtagcg catctgattg gtcgctcaaa
     2281 tttcgatgcg atgagcggtc agtattacgc gcgtttcgtg gtgaaaaatg tcgataactc
     2341 agacagctat ctgcgtcagc cgcaccgcgt gatggaactg cacaacgacg gcacgtatgt
     2401 cgaagagatc accgattacg tgctgatgat gaaaatcgat gagcaaaaca tgcagggtgg
     2461 aaattcgttg ctgctgcatc tcgatgactg ggaacatctg gaccactatt tccgccatcc
     2521 actggcgcgt cgcccgatgc gctttgccgc gccgccgagc aaaaacgtca gcaaagatgt
     2581 tttccatcca gtgttcgacg ttgatcaaca gggtcgcccg gtgatgcgct atatcgacca
     2641 gttcgtccag ccaaaagatt ttgaagaagg cgtgtggttg agcgagcttt ccgatgccat
     2701 tgaaaccagc aaaggcattc tttctgtacc cgttcccgtt ggcaaattcc tgttgataaa
     2761 caacctgttc tggctgcacg gtcgcgaccg ctttactccg cacccggatc tgcgccgtga
     2821 actgatgcgt cagcgtggct atttcgctta cgccactcac cactaccaga cgcatcagta
     2881 agcgcaaagg aattgagcgg atgtatgatt ttgtgattat tggcggcggc atcatcggca
     2941 tgtcgaccgc catgcaactg attgatgttt atccggatgc ccgcattgcg ttgctggaaa
     3001 aagagtccgg cccggcctgt caccagacgg gccacaacag cggcgtgatc catgccgggg
     3061 tctattacac gcccggcagc ctgaaggcgc agttttgcct ggcgggaaac cgcgccacca
     3121 aagccttttg cgatcaaaac gacattcgct atgacaactg cggcaagatg ctgatcgcca
     3181 cgtccgatct cgaaatggaa cggatgcgcg cgttgtggga acgcacggcg gcgaacggta
     3241 tcgagcgcga gtggttaaac gccgaggaac tgcgcgagcg cgaaccgaat atcaccgggc
     3301 tcggcggcat ttttgtgccg tccagcggca ttgtcagcta tcgcgaagtc acagcggcaa
     3361 tggcaaaaat cttccaggcc agaggcggtg agattattta taacgccgaa gtcagcgccc
     3421 tcagtgagca taaaaacggc gtggtcgtcc gaacccgtca gggcggcgaa tatgaagcat
     3481 cgacgctgat tagctgttcc gggctgatgg ctaaccggct ggtgaaaatg ctcggcctcg
     3541 aaccgggttt tattatctgc ccgttccgtg gcgagtattt ccgccttgcg ccggagcata
     3601 accagattgt taaccatctg atttacccca tccctgaccc ggcaatgccg tttttgggcg
     3661 tgcatctcac ccgcatgatc gacggcagcg tgaccgtcgg gccaaacgcg gtgctggctt
     3721 ttaaacgcga aggctatcgc aagcgcgact tctcatttag cgacacgctg gaaattttag
     3781 gctcgtcggg gattcgccgg gtgctgcaaa accatctacg ctcaggactg ggcgagatga
     3841 aaaactcgct gtgcaaaagc ggctatctgc ggctggtgca aaagtattgt ccccggcttt
     3901 cgttaagcga tctccagccc tggcccgccg gtgtgcgggc gcaggcggta tcgccggacg
     3961 gcaagctgat tgacgatttt ctgtttgtca ccaccccgcg cacgatccac acctgcaatg
     4021 cgccctcccc ggcagcgaca tcagcaattc ctattggtgc gcatattgtc agcaaggtac
     4081 aaacgctgtt ggcaagccag agtaaccccg gacgcacgct gcgagcgaca cgtagtgtgg
     4141 atgccttaca cgccgcattt aatcaataac ctttgaaaac aggacgtaac aatgaaactt
     4201 aacgacagta acttattccg ccagcaggcg ttgattaacg gggaatggct ggacgccaac
     4261 aatggcggga tcatcgacgt caccaatccg gcgaacggcg acaagctggg tagcgtgccg
     4321 aaaatgggcg ctgatgaaac ccgcgccgct atcgacgccg ccaaccgcgc cctgcccgcc
     4381 aggcgtgcgc tcaccgccaa agaacgcgcc aacattctgc gcaactggtt caatttgatg
     4441 atggagcatc aggacgattt agcgcgcctg atgaccctcg aacagggcaa accactggcc
     4501 gaagcgaaag gcgaaatcag ctacgctgcc tcttttattg agtggtttgc cgaagaaggc
     4561 aaacgtattt atggcgatac cattcccggt catcaggccg ataagcgcct gattgttatc
     4621 aagcagccga ttggcgttac cgcagctatc acgccgtgga acttcccggc ggcgatgatt
     4681 acccgtaaag ccggtccggc gctggcggca ggctgcacca tggtgctgaa gcccgccagt
     4741 cagacaccgt tctctgcgct ggcgctggcg gagctggcga ttcgcgcggg cattgcggct
     4801 ggcgtgttta acgtggtcac cggttcggca ggcgcggtcg gtaatgaact gaccagcaac
     4861 ccgctggtac gcaaactgtc gtttaccggt tcgaccgaaa ttggccgaca gttaatggaa
     4921 cagtgcgcga aagacatcaa aaaagtgtcg ctggagctgg gcggcaacgc gccgtttatc
     4981 gtctttgacg atgccgatct cgataaagcc gtggaaggcg cgctggcctc gaaattccgc
     5041 aacgccgggc aaacctgcgt ctgcgccaac cgtttggcgt gtatgaccgc tttgccgaaa
     5101 aattgcagca ggcggtgagc aaactgcaca tcggcgacgg gctggataaa ggcgtcacca
     5161 tcgggccgct gatcgatgaa aaagcggtag caaaagtgga agagcatatt gccgatgcgc
     5221 tggagaaagg tgcgcgtgtg gtttgcggcg ctaaagcgga tgaacgcggc ggcaacttct
     5281 tccagccgac cattctggtg gacgtgccgg ccaacgccaa agtgtcgaaa gaagagacgt
     5341 tcggccccct cgccccgctg ttccgcttta aagatgaagc cgatgtgatt gcgcaagcca
     5401 atgacaccga gtttggcctt gccgcctatt tctacgcccg tgatttaagc cgcgtcttcc
     5461 gcgtgggcga agcgctggag tacggcatcg tcggcatcaa taccggcatt atttccaatg
     5521 aagtggcccc gttcggcggc atcaaagcct cgggtctggg tcgtgaaggt tcgaagtatg
     5581 gcatcgaaga ttacttagaa atcaaatata tgtgcatcgg tctttaactg gagaatgcga
     5641 atgaacagca ataaagagtt aatgcagcgc cgcagtcagg cgattccccg tggcgttggg
     5701 caaattcacc cgattttcgc tgaccgcgcg gaaaactgcc gggtgtggga cgttgaaggc
     5761 cgtgagtatc ttgatttcgc gggcgggatt gcggtgctca ataccgggca cctgcatccg
     5821 aaggtggtgg ccgcggtgga agcgcagttg aaaaaactgt cgcacacctg cttccaagtg
     5881 ctggcttacg agccgtatct ggagctgtgc gagattatga atcagaaggt gccgggcgat
     5941 ttcgccaaga aaacgctgct ggttacgacc ggttccgaag cggtggaaaa cgcggtaaaa
     6001 atcgcccgcg ccgccaccaa acgtagcggc accatcgctt ttagcggcgc gtatcacggg
     6061 cgcacgcatt acacgctggc gctgaccggc aaggtgaatc cgtactctgc gggcatgggg
     6121 ctgatgccgg gtcatgttta tcgcgcgctt tatccttgcc cgctgcacgg cataagcgag
     6181 gatgacgcta tcgccagcat ccaccggatc ttcaaaaatg atgccgcgcc ggaagatatc
     6241 gccgccatcg tgattgagcc ggttcagggc gaaggcggtt tctacgccgc gtcgccagcc
     6301 tttatgcagc gtttacgcgc tctgtgtgac gagcacggga tcatgctgat tgccgatgaa
     6361 gtgcagagcg gcgcggggcg taccggcacg ctgtttgcgg tggagcagat gggcgtggcg
     6421 ccggatctta ccacctttgc gaaatcgatc gctggcgggc gtcaccgggc gcgcggaagt
     6481 gatggacgct gttgcaccgg gcggtctggg cggcacctat gccggtaacc cgattgcctg
     6541 cgtggctgcg ctggaagtgt tgaaggtgtt cgagcaggaa aatctgctgc aaaaagccaa
     6601 cgatctgggg cagaagctaa aagacggatt gttggcgata gccgaaaaac acccggagat
     6661 cggcgacgta cgcgggctgg gagcgatgat tgccatcgag ctgtttgaag atggcgatca
     6721 cagcaaaccg gacgcaaaac tcaccgccgg gatcgtggca cgcgcccgcg ataagggcct
     6781 gattcttctc tcctgcggcc cgtattacaa cgtgctgcgc atccttgtac tgctcaccat
     6841 tgaagacgct cagatccgtc agggtctgga gattatcggt cagtgttttg atgaggcgaa
     6901 gcagtagcac cgtccccatg caggaggcga cgctgcgcgt cttgtccggc ctacgagaat
     6961 ccaggtcgga taaggcgttt acgccgcatc cgacaatctg tacgtgaaca ggaataaatc
     7021 tatgtcggcc ggataatgcg gagccgctct ccggcaaaaa gaatcaataa caattaaacg
     7081 cgtgacccgg cgcgggaaat gtcggggcgc tctcccaagt gacacacttt cgagaggatt
     7141 caggatgggg caatcatcgc aaccacatga gttaggcggc gggctgaaat cacgccacgt
     7201 caccatgttg tctattgccg gtgttatcgg cgcaagtctg tttgtcggtt ccagcgtcgc
     7261 catcgccgaa gcgggcccgg cagtattact ggcctatctg ttcgccgggc tactggtggt
     7321 tatgattatg cggatgttgg cggaaatggc ggttgccacg cccgataccg gttcgttttc
     7381 cacctatgcc gataaagcca ttggtcgctg ggcgggctat accatcggct ggttgtactg
     7441 gtggttttgg gtactggtta tcccgctgga agccaacatc gccgccatga tcctgcactc
     7501 gtgggttcca ggcattccca tctggttatt ttccctcgtc attacccttg ccttaactgg
     7561 cagtaattta ttaagcgtta aaaactacgg cgaatttgag ttctggctgg cgctgtgcaa
     7621 agtcatcgct atcctggcct ttattttcct tggtgcagtc gcaattagcg gtttttaccc
     7681 ttatgccgaa gtgagcggga tctcaagatt gtgggatagc ggcggcttta tgcccaacgg
     7741 cttcggtgcg gtattaagcg cgatgttgat caccatgttc tcgtttatgg gcgcagaaat
     7801 tgtcaccatt gccgccgcgg aatccgacac gccggaaaaa catattgtcc gcgccactaa
     7861 ctcggttatc tggcgtattt ctatcttcta tttgtgctct atttttgtcg tcgtggcatt
     7921 aattccgtgg aatatgcccg gactaaaagc cgtcggttct tatcgctcgg tactggaatt
     7981 gctcaatatt ccccatgcga aattaatcat ggactgtgtg atattacttt ccgtaaccag
     8041 ctgcctgaac tcggcgctgt ataccgcttc caggatgctc tactccttaa gccgtcgcgg
     8101 agatgcgcct gcggtaatgg gtaaaatcaa ccgcagtaaa accccgtacg tggcggtgtt
     8161 actctccacc ggcgcggcat tcttaacggt ggtggtgaac tattacgtgc ctgcgaaggt
     8221 atttaaattt ctgatcgaca gctccggcgc tatcgccctg ctggtttatt tagtcatcgc
     8281 cgtttcacag ttgcggatgc gcaaaattct gcgagcagaa ggaagcgaaa ttcgcttgcg
     8341 catgtggctt tatccctggc tcacctggct ggtcatcggc tttattacct ttgtgttggt
     8401 agtgatgcta ttccgcccgg cgcaacagtt agaagtgatc tccaccgact tattagcaat
     8461 agggattatc tgtaccgtgc caattatggc ggctggaata agctgataat gtggcaaaaa
     8521 acacccgttc ataatacgcg ctgataataa tcaggagtca caccatgacc attacgtctc
     8581 tggatggcta tcgctggctg aagaacgata ttattcgcgg taattttcaa ccggatgaaa
     8641 aattacggat gagtttgctg acatcgcgtt atgcacttgg cgttgggccg ttgcgggaag
     8701 cactttctca actggtggcg gaacggctgg tcacggtggt gaatcaaaaa gggtatcggg
     8761 tggcgtctat gtcagagcag gagctgctcg atattttcga tgcccgcgcc aatatggaag
     8821 cgatgttagt gagtctggcg attgcccgcg gtagcgatga gtgggaggca gacgttctcg
     8881 caaaagcgca tctgctcagt aagctggaag cctgtgacgc cagcgagaaa atgcttgatg
     8941 agtgggatct gcgtcatcag gcgtttcata cagcaattgt ggcgggctgt ggttctcact
     9001 atttgctgca aatgcgtgaa cggttgtttg atctggcggc gcgctatcga tttatctggc
     9061 tgcggcgaac ggtgctttcg gtagaaatgc tggaggataa acacgatcag caccagaccc
     9121 tgactgcggc ggtactggcg cgagataccg cgcgcgccag tgagttaatg cgccagcatt
     9181 tactgacgcc aattcccatt atccagcagg cgatggctgg caattaacta ctcttccgga
     9241 atacgcaaca cttgccccgg ataaatttta tccgggcttt ttagcatcgg tttattcgct
     9301 tcgaagattt tattgtacag attagcgtta ccgtagacct gtttggaaat ggcactcaga
     9361 gtgtcgccag acttaacggt ataaaactgg ctggcagtgg ctggtgtcgc cgttttcacc
     9421 tgatcatcaa cactggcaat accggaaata ttccccaccg caacaaggat tttctccttc
     9481 gcctcctgac tcaggccgtc accagtgacc gtcgctttgc cgtcggcaat ttgaatgttc
     9541 actttatcgg catcaggtat accggttttg ctcagatgct cctgcacctt cttcgcctga
     9601 tcgtctttat cgtgctgacc tgtaaccgcg tcccagagtt tttctccggc atctttcaca
     9661 aaattgaaca gacccatagc tacctcattc gttaacggaa acactcagaa agtgtagcag
     9721 aggaacgcgg cgcgttaacg ccgcgggggg gagcacaggt ttaatcgcgg gtttgcaccc
     9781 agaacgcgtg aatcaaaccg gggatatacc caagcagtgt cagcagaata ttaataatga
     9841 acgcccaacc gaacccttta ccgagcagca cgccgagcgg cggcagaatg atggtgatga
     9901 cgattctcca gaaacccata tgtactccct ataagaaaat tactcattgt ttaaaaagag
     9961 attttatctc ttaagcgtag taattttagc ggagcctgcc agtttcagct tacgctttta
    10021 ctctcattta cgctgctgag gctggtatat gttgcatttt tagtttagag tttacttaat
    10081 ttagaaaata cttaaataaa tatgactgaa ctcgcgcaat tacaggccag tgccgaacag
    10141 gcagcggcct tattgaaagc aatgagccat cctaaacgat tgctgattct gtgcatgctt
    10201 agcggttccc ccggcaccag cgcgggagag ctgacgcgca ttaccggact gagtgcctct
    10261 gcgacatcac agcatctcgc tcgtatgcgg gacgaagggc ttatcgacag ccaacgggat
    10321 gcccaacgca ttctatattc cattaaaaat gaggcggtaa atgccattat cgccaccctg
    10381 aaaaatgtct attgtccgta aggagtcact atggctttga caaccatttc gccgcatgat
    10441 gcacaagaat taatcgcacg cggcgcaaag ttaatcgata ttcgtgacgc tgatgaatat
    10501 cttcgtgaac atattcctga agcagatctg gctccattat ccgtgctgga acagtcaggt
    10561 cttccaccta aattacgtcg cgagcaaatt atattccact gccaggcagg taaacgcacc
    10621 agtaataacg ccgataaatt agcagcgatt gccgcccccg cagaaatatt tttactcgaa
    10681 gataggattg atggctggaa aagagctgga ttgccagtag cggtaaataa atctcaaccc
    10741 ttgccgttaa tgcgccaggt gcagatcgct gcgggtggtt taatattaat cggcgttgta
    10801 ctgggttata ccgtaaatag cggtttcttc ttattaagtg gctttgttgg tgccgggtta
    10861 ctgtttgcag gaatcagcgg tttttgtgga atggcaaggt tgttagataa gatgccgtgg
    10921 aaccaacgag cttgagaagc gacgccggac gcgccctagc agcgacatcc ggcctcagta
    10981 attagatcag gaaatcgtcg agagatttac cttctgccag cgcctgagca attggcttcg
    11041 gtgtacggcc ctgaccggtc caggtcttag tttcaccgtt aacatcagtg aatttatatt
    11101 tcgccggacg cggctggcgt tttttaccag cacgtggtgc agcagcagag ctattaccca
    11161 ataactcttc cgggttaatt ccgtcagctt tcatcagctc cagccaggtg ctaatttttt
    11221 cctgacgctc agccagttca cgctgctgct gttcttcttc ttcacgtctt tctttagtga
    11281 caaccctgaa tttttcgagc atttcttcaa gaacgtcaat ggagaattcg cgagccatcg
    11341 cacggagggt tcgaatgtta tttaaacttt gtaacattac ggacataata aagaaaacct
    11401 tttaacgcca aaacaaaaaa gtatttcgtc gcgtagtgta agcgatcact tattatattt
    11461 ccacaaaatt taatctattt acagtcctgc gcgagattat ttcagctgtt attttctgaa
    11521 actctcagaa taatttcaag attatatatt agccattttg atgagtaatt taggttattg
    11581 gtgaacagag tggcgctctc tgctcgctaa ctccgcaagc ctgataaaac cgaagtgaat
    11641 aaaaatgcaa tataacagaa taaaagaaaa cacccctcac tggtgctttc tgctgttaat
    11701 gtacattttc tggcatcaaa aatgctgtaa atgacccggt cacgacaaac accgaattct
    11761 ctacgcttat agcgttacct cacccccaaa ctttcattag tgaaattaaa ggcaaggtca
    11821 tatccaattg atttaattga aaataaatca tatcggcatg taaaaatcca caatgtacaa
    11881 aaaacgagct gttacggaat attttatcta caaaaactga ctaaataaaa gtttttcact
    11941 aattgattag tcatagccag cgatatacgc tatgcgaaaa tgcagatggc aatgagatcc
    12001 actgctttca tctccattaa catcccatta cgctttatta aggagcatta gcatgttctc
    12061 accgcagtca cgcttgcgtc atgcagttgc agatacgttc gcgatggttg tttactgttc
    12121 tgtcgtgaac atgtgtattg aagttttcct ctccggaatg agcttcgaac agtcttttta
    12181 ttccagattg gtagcgattc cggtgaacat cttaattgca tggccatacg gtatgtaccg
    12241 cgatctgttt atgcgcgcgg cacgcaaagt tagcccgtcg ggctggataa aaaatctggc
    12301 tgatatcctg gcttatgtga cgttccagtc accggtgtat gtggcgatct tgttagtggt
    12361 gggcgcagac tggcatcaga ttatggcggc ggtcagttca aacatcgttg tttcgatgtt
    12421 gatgggggcg gtttatggct acttcctcga ttattgccgc cgactgttta aagtcagccg
    12481 ttaccagcag gtaaaagcct gactcttctt ttcgcgactg gcatcgccag tcgcgtcttt
    12541 aactggcttc gccaaataaa ccattcaaat aacgttcaag cgcaacacgc gaactgaagc
    12601 catgcgggat accgtaatgc tcgtgtcgct cgcctgctaa atagagcgga aattgctggt
    12661 aatgatcgca agttttaata tcggaagcgg gttcagccag tgttgaactg cgttctttta
    12721 atgttggatg aattaccaga gcggtacgtc ccattcgcgc ttcgcgatta acatagacat
    12781 aattttcccc acggcggtaa ccatacgctt tctgggttac cacatcgaca gtaaaaccga
    12841 ctttttcaag tacgcgcgcc acctcgtctg gtcgtaaata catatttgat cctcgttatt
    12901 ttcaaccgcg g
//
LOCUS       DAJVUK010000125        12908 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.125, whole genome shotgun sequence.
ACCESSION   DAJVUK010000125 DAJVUK010000000
VERSION     DAJVUK010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12908
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.125"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(75..1697)
                     /gene="eutB"
                     /locus_tag="OQQ57_003166"
     CDS             complement(75..1697)
                     /gene="eutB"
                     /locus_tag="OQQ57_003166"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HCS1957835.1"
                     /translation="MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQA
                     QTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQL
                     RESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAYEDDCVT
                     RLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSN
                     ADLIYGAKKMPVIKKANTTIGIPGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAV
                     IGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIEAIRRGAPGGLIFQS
                     ICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANFGADQV
                     TMEARNYGLARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMGCDC
                     CYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLNL
                     RPSPEFERWLESMGIMANGRLTKRAGDPSLFF"
     gene            complement(1687..2523)
                     /gene="eutJ"
                     /locus_tag="OQQ57_003167"
     CDS             complement(1687..2523)
                     /gene="eutJ"
                     /locus_tag="OQQ57_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HCS1957836.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            complement(2534..3937)
                     /locus_tag="OQQ57_003168"
     CDS             complement(2534..3937)
                     /locus_tag="OQQ57_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HCS1957837.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            complement(3949..4236)
                     /gene="eutN"
                     /locus_tag="OQQ57_003169"
     CDS             complement(3949..4236)
                     /gene="eutN"
                     /locus_tag="OQQ57_003169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HCS1957838.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            complement(4343..4636)
                     /gene="eutM"
                     /locus_tag="OQQ57_003170"
     CDS             complement(4343..4636)
                     /gene="eutM"
                     /locus_tag="OQQ57_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HCS1957839.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            complement(4675..5691)
                     /gene="pta"
                     /locus_tag="OQQ57_003171"
     CDS             complement(4675..5691)
                     /gene="pta"
                     /locus_tag="OQQ57_003171"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCS1957840.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSFIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YNIAQRLGGYRAVGPLIQGLAVPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQ
                     TLVE"
     gene            complement(5681..6490)
                     /gene="eutT"
                     /locus_tag="OQQ57_003172"
     CDS             complement(5681..6490)
                     /gene="eutT"
                     /locus_tag="OQQ57_003172"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001425897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HCS1957841.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQKPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVLEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGERNDY"
     gene            complement(6487..7188)
                     /gene="eutQ"
                     /locus_tag="OQQ57_003173"
     CDS             complement(6487..7188)
                     /gene="eutQ"
                     /locus_tag="OQQ57_003173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HCS1957842.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEGVLHVRHEGQTMIAKAGDVMFIPKGSSIEFGMTSS
                     VKFLYVAWPANWQSL"
     gene            complement(7163..7642)
                     /gene="eutP"
                     /locus_tag="OQQ57_003174"
     CDS             complement(7163..7642)
                     /gene="eutP"
                     /locus_tag="OQQ57_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HCS1957843.1"
                     /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            complement(7655..7990)
                     /gene="eutS"
                     /locus_tag="OQQ57_003175"
     CDS             complement(7655..7990)
                     /gene="eutS"
                     /locus_tag="OQQ57_003175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HCS1957844.1"
                     /translation="MDKERIIQEFVPGKQVTLAHLISHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            complement(8282..10561)
                     /gene="maeB"
                     /locus_tag="OQQ57_003176"
     CDS             complement(8282..10561)
                     /gene="maeB"
                     /locus_tag="OQQ57_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HCS1957845.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
                     EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV
                     VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG
                     IEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDR
                     MPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV
                     RRIVNMVALAVVEAQTQPL"
     gene            10850..11800
                     /gene="tal"
                     /locus_tag="OQQ57_003177"
     CDS             10850..11800
                     /gene="tal"
                     /locus_tag="OQQ57_003177"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCS1957846.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGISAAEELEKEGINCNLTLLFSF
                     AQARACAEAGVFLISPFVGRIYDWYQARKPMAPYVVEEDPGVKSVRNIYDYYKQHHYE
                     TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            11820..>12908
                     /locus_tag="OQQ57_003178"
     CDS             11820..>12908
                     /locus_tag="OQQ57_003178"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416960.1"
                     /note="catalyzes the formation of ribose 5-phosphate and
                     xylulose 5-phosphate from sedoheptulose 7-phosphate and
                     glyceraldehyde 3-phosphate; can transfer ketol groups
                     between several groups; in Escherichia coli there are two
                     tkt genes, tktA expressed during exponential growth and
                     the tktB during stationary phase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCS1957847.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTGYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK
                     DWEKTTQKYINELQANPAKIATRKASQNT"
BASE COUNT         2876 a         3696 c         3357 g         2979 t
ORIGIN      
        1 tcccattgac gccatcacgc tgcgtacaat ttcttcaatc tgtttttgat ccatgatgtg
       61 ttatctccgc gtcatcagaa gaacagtgac ggatcgcccg cccgtttggt caggcgaccg
      121 tttgccataa tgcccatgct ttccagccag cgttcaaact ctggtgacgg gcgcaggttg
      181 agtaactgac gcacagtggc ggtatcgtgg aatgcggtgg tctggtagtt gagcatgatg
      241 tcatcaccca gcggcatccc catgatgtag ttgcagcctg cggtggcgag caggatcatc
      301 aggttttcgt tgaggttctg gtcagcgtca gcgtggttgg tgtagcagca gtcacagccc
      361 atagagatgc cgctcagctt gcccataaag tgatcttcta agccagcacg gataatctgg
      421 cggtcgttgt agagatactc cggcccaata aagccgacca cggtgttgac gataaacgga
      481 tcgtaatgac gcgccagccc atagttacgt gcttccatcg tcacctggtc agcgccgaag
      541 ttagcgccag cggatagcgc agagccttgt ccggtttcga agtagaggca gttttccccg
      601 gcgatacggt tgaactctgc acccactgcg cgcgcttcgt cgagcatcgc cagttccacg
      661 ccaaactctt tcagcccttt ttcgctgcca cagatactct ggaaaatcag tccgccaggc
      721 gcgccgcgac gaatcgcttc gatctgggtg gtgacgtgcg ccagtacgca gccctgagtt
      781 gggatgttga atttgtcgat cacgccataa atggtatcca gcacgcggct taagttttcc
      841 acgtcgtcag ttaccgggtt gacgccgatc accgcatcgc ccaccccgaa ggaaagccct
      901 tcgtagattt gcgcggcgat actttgcacg tcgtcacgag tgtcatttgg ctgcaaacgg
      961 gcgctgaagg tgcccggaat accgatggtg gtattggcct ttttgattac cggcattttc
     1021 ttcgcgccgt agatcaggtc cgcgttggag caaatcttcg ctaccgccgc gaccacttcc
     1081 gaggtcagcc ctttgcgggt aaaggcaatg tcgtccacgc tagtttcatc gctcagcaca
     1141 tactcacgca gttcgctgat gctccagttt ttaatctggt tgtaggccgt ttcgttaaca
     1201 tcgtcctgaa tcagccgcgt cacgcagtca tcttcatagg caatcagcgg caagcgcggt
     1261 tgcagaacgc tggtttctga catctctgcc agcgtgctat ccgggttcgt caccagcaac
     1321 gccacggctt tcgccgcatc cagcaccgag ccgccgccaa atgcgatcac cccatcacag
     1381 cctgactcac gcaactgcgc cacggctgca cacacgtcgg tgatgcacgg ttcgcccacc
     1441 ggacatggcc agagcgtcat ggcgatgcct ttaacagcca ggctgcgcgt cagcccggcg
     1501 gtcatccctg cctgatgcaa aaagctgtct gccatcacga acagatgttt cagcccacgc
     1561 gtttgcgctt gctgtccgca actgctcacc gagcccggac cgcaaagcgt caccggtgga
     1621 acgctaaatg tttttacccg ttgcagattc agggtatcga acgcctgaaa gagcgcggtc
     1681 tgcaattcat tttgcatata gcccctccgc tttctctcgc ccactactgg cgatcgccag
     1741 cggggtcata aacaaactgt gctgcggtaa atgcacctgt aacgccggga attgtttgcg
     1801 aaacagttcc gccacgcccg gttgcataca agagccgccc gccagccata aatcagtaat
     1861 gccctgccct tcaatatgcc gggcgacaat gtccgccatt ttttcgtaca ccggtttcac
     1921 cgtaggccaa atctcttcac cgtgaccgcg cttgtactgc tccgcctctt ccagcgaaat
     1981 acggcgattt ccggcgagag tcagagagat gtgatgtccg ccggttgctt catccgccga
     2041 gtacgtcacc ttgccctttt tcacgatggc aatgccggta gtgccgccgc cgatatccac
     2101 tacaccggcg ttgtccagtt gcagcagctc cgcaactgcg gttggctcat ccagcacatg
     2161 gctcacttcc agtccagcag actccagcac gttgatggaa atacgcgggt ccgtacctgg
     2221 aggaaatgaa gtcgccgcat ggctaaaacg gcgaccgaat tgctgctcga gcgtgtcgag
     2281 atggcgacga acaatggtga cagcgccgaa gaaatcccag acgatgccgt cgcggaccac
     2341 atcggcccag tcgaggcata ccgccaccgg ctgaccgtcg cggtcgacaa ccatcgacac
     2401 cacatcgcag gtgcccagat ccacccccag ccacagcgga gattccgtcg cggcgggcgt
     2461 ctggttacac agcgttgccg ccgtttgcag acgtggggtg agccattgtt cgtcgtgcgc
     2521 catctgttac tccttaaaca atgcgaaacg catcgactaa tacacagcga cgcagacgga
     2581 caaacgtacg cgcgctggtt accccttcac cggttggcgt ggtgatggtc atggtggtcc
     2641 agccttcccc gcccagcccc agcccggcaa tgcacggtcc gttcttaacg aaaatgctgg
     2701 tatcaatagc attcgccatc tggttcatgt tttcgatgtt gcgcgagtgc attgccgccg
     2761 tgtggtggca accgccttcc agtttcaccg ccagcgcaat ggcatccgcc acgttggcga
     2821 cgcgcacgac gggcagcacc ggcatcatca gttcggtcac ggcaaacgga tgttctgcag
     2881 tggtttccac aaacagcaaa cgcgtttctt gcggcacgtt caggccgatt gccgccgcga
     2941 ttttcgccgc atcgcgacca acccagtcac ggctgacggt gccttttccg cgctcgtcga
     3001 tatttttcag caacaccggt tgcagctgct gcgcctgttc tgcggtcagt ttcaccgcgt
     3061 gctggccttc catcagacgc atcagttcat cggctacgct atcaacaaca atcagtacct
     3121 tttcgtcggc acaaatgatg ttgttatcga aagaagcgcc tttgacgatg gactgagcgg
     3181 cacgggcgag gtcggcggtt tcatccacca ctaccggcgg gttgccagcg cctgcggcaa
     3241 tcagacgttt attggtgtgt ttacgcgccg cttctactac cgcttcgccg ccggtcacca
     3301 ccagaaggcc gatgcccgga aacttgaaca aacgctgcgc ggtttcgata tccggatttg
     3361 ccacagtaac cagtaagttt tccggcccgc ctgcggcaac aatcgcctgg ttgagcagcg
     3421 tgatcgcccg ctgggagact tttttcgccg ccggatgcgg ggcaaaaatg acgctgttgc
     3481 ccgcggcaat caggctgatg gcgttattaa ttacggttgc cgccgggtta gtggacggag
     3541 ttaccgaagc caccacgccc cagggcgcgt tttcaattaa agtcaggccg ttgtcgccgg
     3601 tcagcacctg cggagagaga cactcaacgc ctggcgtgcc gcgcgcctga gcgacgtttt
     3661 tggcaaattt atcttcaacg cggcccatgc cggtttcact gacggcaagt tccgctaaat
     3721 ctctggcgtg tttttcgcct gcctcacgaa tggcagcaat ggctaactgg cgcattgcca
     3781 cgctttttaa cccttgctgg gcgactttgg ctgccgcaac ggcgtcatcc agggacgcga
     3841 aaacgcccat ctcatgaacg gcggcgggcg gcgtgtcact gctttgcatt ttcagcagta
     3901 ccgctttcac cacctgttca atatcctgtt gattcatgat gttctgcctt atttgtggaa
     3961 aattacctga ccgccagaca ccacctcatc gacaatgcca atcacgcaca gatcgaccgg
     4021 tgacgtttcg cttttatgcg cctggcgggc ggaactgcca ctcaccagta acacccactc
     4081 cccggttccc gcgccaatat tgtcgatggc gacggcgcat tgcccgtcag gattaccttg
     4141 tggatcaatc atttccacca tcagcaattt gtcatgcgcc agtccgtgat ggcgtacggt
     4201 acaaacaatt tgtccagtga cgactgccag tttcataccc gcctccgtgg cgtatttcag
     4261 gtaaaagctc cccctaccct ccgcagaagg taaaatgaaa aaggagagag cgtaacgccc
     4321 gaatcgacgt cacacagggt gattacaggt tgctgctatc gcctttcagg ccgatcggga
     4381 agacttcttc caggtcgccg tgcggacgcg ggataacgtg tacagatacc agctcgccga
     4441 tacgctgtgc cgctgcggca cctgcatcgg tcgcggcttt acaggctgca acatcaccac
     4501 gaaccatggc agtacagagg ccgccgccaa tctgcttaac accaaccagc ttgacgcgcg
     4561 cagctttcac catcgcgtca gaagcctcaa tcagtgcaac caggccccgg gtttcgatca
     4621 ttcctaatgc ttccattgtg ctttcctctt tatcagggtc cagaacggga ccgttcattc
     4681 aaccagtgtt tgtaaactgc tttcgcggtt cacttctgtc tgacgcggca cagctgccac
     4741 cagcgccagc tcgataattt cctgcacgct acaaccacga gagagatcgt gcatcggcac
     4801 ggcaagtcct tgtatcagtg gcccgacggc acgatatccg ccgagtcgtt gtgcgatgtt
     4861 gtaaccaata tttccggctt ccagcgacgg aaaaaccatc acattggcct tgccctgtag
     4921 cgggctggca ggcgcttttt gcgccgccac ttccggcacg aaggcggcgt caaactgtaa
     4981 ctcgccatcc accaccagct ttggtgcgcg ctcacggacg atttctgtcg cctgctggac
     5041 gttagcaaca caggggtgac gggcgctacc attgctggaa aacgacagca tcgccacgcg
     5101 cggctcttct ccggtgatgg cgcgccaggt ttcggcactg gcaagcgcga tatccgccag
     5161 ctgcgccgcc gtcggctgtg gcaccacgct gcaatcggca aagcccaacg ccgggccgct
     5221 gtactgtggc aacatcagga aaatgaaaga gagcgtttta cagcctggct gcaagccgat
     5281 aatgcgtaat ccggcacgca gcacatttgc cgtggaagag aggttgcctg cgatacagac
     5341 atccgcttta ccggcgctga ccattgctgc ggcgaacatc agagggtcgg taagtttttc
     5401 cagcgcatcc ggcggcgttt tttcgcccgc gcgggccagc cagcgatgag caaattcttc
     5461 ccgcattgcg aggttgccat gcggatcaat cacctgtagc ccgtccatcg ccacgccgtg
     5521 actgagcgca aactgacgaa gttcaaacgg attggcgacc agaatgggcg ttgccagacc
     5581 ttgttgatgt aaatattgcg cggctttcag cacacgttga tctaacgcat ccggaaaaac
     5641 cactctggcg ggcgctcgca acgccagttc acgacaacgt tcaataatca ttgcgttccc
     5701 ccagtcgttg ttggatctgc ttcaccgtta gcggctgctt cgttacgctc aggatcatca
     5761 tcacgtagac cgtgctggaa aggcggttca gcgcctgcaa aatgtccggg cgtaatactt
     5821 caaagctgcg ggtgataaag acctgcgccg ctacggtttc ggtttcccgc actttggtgc
     5881 gtagcagatt gagcaacgca gcatcgcgcc cgtggctggc ttccagcacc agatgatcgt
     5941 ggtcgagata gcgcagcggc tgatgagaaa gccgatgcag atcttcgtca gaaagcccga
     6001 caatcgcctg gcagcccagc ggttccccca gcgcatcggc gcgcataatg ttgccaagac
     6061 gcgaacggat atccgccagc cacggctgcc acggttccgc cagttcaatt tgcagccaca
     6121 ctgccagcgc aatggtgctg tcgagaaccg cgcgaaaacc cagacgcgga tcgcttttgg
     6181 cgaccatttt ttccgccgac aggtgagtca gcgtatccgg cttttttgcc accggctggc
     6241 ggcacagttc gcagcacgcc tgcggatgtt catcgctact ggtcagccca tgaacgggct
     6301 gcggcttctg ctgttcatcg tcaacaaaca ggcggccctg ctcgtcaata aacttgatgc
     6361 gcagatggcg gctttccagc aactcccggg cagagggcgt caggcgactg tccgcaggga
     6421 gatggatctc tgcgccttcg ctgagcgtat ggttcgctct tagccatgct tcggtgatga
     6481 aatctttcat agggattgcc agttagccgg ccaggcgaca tacaggaatt tcacgctgga
     6541 tgtcatacca aattcgatgc tggagccttt cgggataaac atcacgtcgc ctgctttggc
     6601 gatcatggtt tggccttcgt ggcgaacatg cagcacccct tccagcacca tgtcgatttc
     6661 gtcgtagttc agggtccacg ggaagaatgc gttctcccac tgcataaaac cggcggccat
     6721 gctgctgccg tcgtctccgg tcacaagatc agtcaagccc acgcaatgcg gctctgcgcc
     6781 gtcgaaacga ccaaacttga cgctgctgcc atcaatcact ttgatgccgc ctttgccggt
     6841 caccgatttg aagctcggct gcattgcgcc ctgctccagc gactgttttt ccttcatcac
     6901 tttttccatc agctgtgcga ccaggctttc ggtaaactgg ccttccggca gctgggcaat
     6961 gatggtttcg cggatgcgct ggctttcggt tttgtcggct ggcacgctgg cgggcacgga
     7021 cgccgttacc gggatcgatt catcacattc ggtgatggta aaacccagta gatccgccac
     7081 ttcacgggct tccggggtaa taatgctggc gcgcagaacc acggacattg cctgttcgcc
     7141 gcgcgcgtgt gcttcacgaa tatcattcgc tgtgatgagt tttttcacct gcttcctcct
     7201 gtttggtgag agatgccaga taatccacca gttgctgcac gctttgcggg tcgtggctgt
     7261 ttagctcgaa aatcggctct tcgaaacccg tctcaagcaa taactttcgc gttgcggcga
     7321 cgtcagcatc tggcatgtcc gttttactga tgacggcgat ttgccgtttg ctgacgccaa
     7381 tatccagcaa cccggcaggc aaccgacttt ccgggtcatt tgcgccatgg acatagatca
     7441 gcatgtctac atcctgtagc gtggtaatta aggcgtgata ccagcgggga tggctaaaat
     7501 attcacccgg cgtatcaata tcgcccttat cattaaattc cacggcctgt gtttttctgg
     7561 cgagggtata attcccctgc aacgcattaa ataacgttgt ttttcctgcc ccgacactac
     7621 ccacaaacgc aattcgtttc atgaatgcct cgtattaact tttggtcatt tcacaaagcg
     7681 tataatttaa taagcgacct aaaccgctga cggtttgtga taacgcttct tctactgcgc
     7741 ccaccgagcc ataaatcacc aatgcaccgc tgaagcggtc gagaaaaccg atatgcacat
     7801 cagcggcttt cagcgctaaa tcaccggcga tcatcgccgt ttcgccggga gttagcgtca
     7861 taatgccaat tgcgcccgca tccggaacgc cgattttctt cgccagttcc tcaccgggat
     7921 gcgagatgag atgcgccagt gtgacctgtt tgccgggcac aaattcctga atgatgcgtt
     7981 ctttatccat gagtcgccgc ctgtgaaaaa ctttcgtgta tcgtgacaat ttttcgtcag
     8041 agtaaataac aaaattcggc aagcgcgttt aaaaggtgag gtagatcact aagaatggag
     8101 agatattcgc tgtggtgcat aaactttcat atgcaacgca tgaatataaa taaaataata
     8161 tcgagatatt atatagactg cttttttatt attcgcaaac tcagtaataa gctttactaa
     8221 tatattgcag ccaaaccgct taccctgaat attcagggta agcgtgagag ttaaaaaaga
     8281 attacagcgg ttgggtttgc gcttcaacca cggccagcgc caccatgttg acgatacgac
     8341 gcaccgatgc gatcggcgtt aacacgtgaa ccggtttcgc cacgcccatc agcaccggac
     8401 cgacagtcac accttccgag ctggaaacgc gcagtaagtt gtaactaatg cgggcagctt
     8461 ccatgttcgg catcaccaga atattggcag aacctttcaa agggctgtcc ggcatacggt
     8521 cgttgcgaat cgcttccacc agcgctgcat cgccgtgcat ttcaccatca atcatcagat
     8581 ctggcgcacg atccctgacc agttccagcg cctgacgcat tttgctcgac gacgggcagt
     8641 cagaagaacc aaagttggag tgcgacaaca gagcaacgcg cggctcaata ccaaaacgac
     8701 ggacagtttc tgccgccatc aaggtgatct ccgccagctc ttctgcgtct ggttcgtcat
     8761 tgacgtaggt atcggcaata aaggtgttac cactcggcag cagcagcgcg ttcattgcac
     8821 ctgcggtgtg aacgccatcg cgataaccaa agacattttt caccacgcta aaatgttcat
     8881 gataatcgcc caccgtaccg cagatcattg catcggcttc cccacgctga accatgatcg
     8941 cgccgatcac tgtcgggtta ctgatcagcg cccgctgcgc ctgttcctga gtgacaccgc
     9001 gacgcttcat gatctggaag tattcggtcc agtactcttt aaagcgcgga tcggattcgt
     9061 tattgacgat ctcaaaatca acgcccgctt tgatctgcaa gcccagtttc tgaatgcgca
     9121 tttcgatcac gttcggacga ccgataagga tcggtttcgc cagtcccagc gttaccagtt
     9181 cctgagtggc atgcagaacg cgcgcctctt ccccttctgg cagaacaacg cgcttcggcg
     9241 ctttgcgagc ctgggagaaa atcggcttca taaacaggtt ggttttgtaa acgaactcag
     9301 tcagcttgtc gatgtagacg tcgaaatcag caatcggacg cgtcgccacg cccgactcca
     9361 tcgcggcttt agcgaccgca ggagcgatct taacgatcaa gcgcggatca aacggttttg
     9421 gaatgatgta ttccggacca aagctcagat cctgatcgcc atacgctgaa gccaccactt
     9481 cgctctgttc cgcatgggcg agttctgcaa tcgcacgtac cgccgccagt ttcatctctt
     9541 cgttgatggc ggttgcgcca acgtccagcg cgccacggaa gatgaacggg aagcacagga
     9601 cgttgttcac ctggttcgga tagtcagaac gaccggtgca aatgatggca tccggacgca
     9661 cttctttcgc cagcggcggc agaatttccg gttccgggtt cgccagcgcc aggatcattg
     9721 gcgcacgagc cattttcttc accatttcct gggtcagcac tttcgggccg gaacatccga
     9781 ggaaaatatc cgcgccttca atcacatcat cgagggtacg tttgccgtcg tccaccaccg
     9841 catatgcggc tttggtttcc gccatgtttg gctcacggcc ctgatagata acgccttttg
     9901 aatcgcaaac cacgatgtta tgtttttgca gacccagcgc taccagcagg ttcatacagg
     9961 cgattgctgc ggcacccgcg ccggaaacca ccatccgcac gtcggagatg tttttctcca
    10021 ccacgcgcaa gccgttgagg atggcggcag tgctgatgat tgccgtgccg tgctgatcgt
    10081 cgtggaatac cggaatattc atccgctcgc gcagtttctg ttcaatatag aaacattctg
    10141 gcgctttaat gtcttcgagg ttgattccgc cgaaggtcgg ttcgagcgca gcgacaactt
    10201 caataaattt gtccgggtcg agttcatcaa cttcaatgtc aaatacatca atcccggcga
    10261 atttcttaaa cagaacgccc ttgccttcca tcaccggttt gccagccagc gcgccaatgt
    10321 tgcctaaccc cagcaccgcc gtaccgttag agatcaccgc caccaggtta ccgcgcgcgg
    10381 tatatttgta ggcttttaac gggtcttttt cgatttcaag acaaggtgcg gcaacgcctg
    10441 gtgagtaggc cagcgccaga tcgcgctgcg ttgccagagg cttggttgga gaaacctgga
    10501 ttttccctgg aactggaaat tcatggaaat caagtgcact ttgttttaac tggtcatcca
    10561 tttggttgtt cctttcacgt aacgttcaca aataaagtgt gtgggcaaca gcccctgccc
    10621 acaacgtggc gcacattatt accccgccgg agtctacaga ctttgagcaa gtccaaactc
    10681 tcaccattaa tataatgttt tggtaataat cctataacac tgatgttacc tgcttaatcc
    10741 agcaatacca tgcctgtctg ctatgctttt ttgatgcgtt tagcgaaatt tctcagaagt
    10801 gtgaattaac gcactcatct aacactttac ttttcaagga gtatttccta tgaacgagtt
    10861 agacggcatc aaacagttca ccactgtcgt ggcagacagc ggcgatattg agtccattcg
    10921 ccattatcat ccccaggatg ccaccaccaa tccttcgctg ttgctcaagg ctgccggatt
    10981 atcacaatat gagcatttaa tagacgatgc tatcgcctgg ggtaaaaaaa atggcaagac
    11041 ccaggaacaa caggtggtcg cagcgtgtga caaactggcg gtcaatttcg gtgctgaaat
    11101 tctcaaaatc gtacccggtc gcgtgtcaac agaagttgat gcacgcctct cttttgataa
    11161 agaaaagagt attgagaagg cgcgccatct ggtggacttg tatcagcaac aaggcgttga
    11221 gaaatcacgc attctgatca aactggcttc gacctgggaa ggaattagcg cggcagaaga
    11281 gctggaaaaa gaaggtatta actgcaacct gacgctgctg ttttcttttg cccaggcgcg
    11341 ggcctgtgcg gaagcaggcg tttttctgat ttcgccgttt gtcgggcgta tttatgactg
    11401 gtatcaggca cgcaagccga tggccccgta tgtggtggaa gaagatccgg gcgttaaatc
    11461 ggtgcgcaat atctacgact actataagca acaccactat gaaaccattg tgatgggcgc
    11521 gagcttccgt cgcaccgaac aaatcctcgc cttaaccggc tgcgatcgac tgactatcgc
    11581 accgaatttg ctgaaggagc tgcaggaaaa agtttcgcca gtggtacgta aattaatccc
    11641 accttctcag acgttcccac gcccagctcc catgagcgaa gcggagttcc gttgggagca
    11701 caatcaggat gcgatggcgg tagaaaaact gtctgaaggc attcgtctgt tcgccgttga
    11761 tcaacgcaaa ctggaagatc ttcttgccgc caaactataa accagccacg gagtgttata
    11821 tgtcccgaaa agaccttgcc aatgcgattc gcgcactcag tatggatgcg gtacaaaaag
    11881 ccaactctgg tcatcccggc gcgccgatgg gcatggctga tattgccgaa gtgctgtgga
    11941 acgattttct taaacataac cctaccgacc caaccgggta tgatcgcgac cgctttattc
    12001 tttccaacgg tcacgcgtcg atgctgctct acagtttgct gcatctgacc ggttacgacc
    12061 tgccgctgga agagctgaag aacttccgtc agttgcattc gaaaacccca ggccacccgg
    12121 agattggtta tacgcccggt gttgaaacca ccaccggtcc acttggacaa ggtttggcga
    12181 acgccgtcgg actggcgata gcagagcgta cactggcggc gcagtttaat cagccggatc
    12241 atgaaattgt cgatcacttc acctatgtgt ttatgggcga cggctgcctg atggaaggta
    12301 tttcccacga agtctgttcg ctggcgggca cgctaggact gggcaagctg attggttttt
    12361 acgatcacaa cggtatttcg attgatggag aaaccgaagg ctggtttacc gacgatacgg
    12421 caaaacgttt tgaagcctat cactggcatg tgatccatga aatcgacggt cacgatccgc
    12481 aggcggtgaa ggaagcgatc cttgaagcgc aaagcgtgaa agataagccg tcgctgatta
    12541 tctgccgtac ggtgattggc tttggttcgc cgaataaagc aggtaaggaa gaggcgcacg
    12601 gcgcaccact gggggaagaa gaagtggcgc tggcacggca aaaactgggc tggcaccatc
    12661 cgccatttga gatccctaaa gagatttatc acgcctggga tgcccgtgaa aaaggcgaaa
    12721 aagcgcagca gagctggaat gagaagtttg ccgcctataa aaaggctcat ccgcaactgg
    12781 cagaagagtt tacccgacgg atgagcggtg gtttaccgaa ggactgggag aaaacgactc
    12841 agaaatatat caatgagtta caggcaaatc cggcgaaaat cgctacccgt aaggcttcgc
    12901 aaaatacg
//
LOCUS       DAJVUK010000126        12855 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.126, whole genome shotgun sequence.
ACCESSION   DAJVUK010000126 DAJVUK010000000
VERSION     DAJVUK010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12855
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.126"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(774..926)
                     /locus_tag="OQQ57_003179"
     CDS             complement(774..926)
                     /locus_tag="OQQ57_003179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957848.1"
                     /translation="MSDITAYRPEVVNENTDVICSTSIRRILAVRKSSLLQIDTIIRH
                     QVSDIS"
     gene            complement(1011..1208)
                     /locus_tag="OQQ57_003180"
     CDS             complement(1011..1208)
                     /locus_tag="OQQ57_003180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957849.1"
                     /translation="MKSLTTETALDILIAWLQDNIDCESGIIFDNNEDKTDSAALLPC
                     IEQAREDIRTLRQLQLQHQNR"
     gene            complement(1220..1708)
                     /locus_tag="OQQ57_003181"
     CDS             complement(1220..1708)
                     /locus_tag="OQQ57_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957850.1"
                     /translation="MKLSLMLEADRINVQALNMGRIIVDVDGVNLTELINKVAENGYS
                     LRVVEESDQQSTCTLPPFATLAGIRCSTAHITEKDNAWLYSLSHQTSDVGESEWIHFT
                     GSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVITLTRRYGVSLIHLDASAECLPGLPTF
                     NW"
     gene            complement(1705..2079)
                     /locus_tag="OQQ57_003182"
     CDS             complement(1705..2079)
                     /locus_tag="OQQ57_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HCS1957851.1"
                     /translation="MKTLPDTHVREASSCPSPVTIWQTLLSRLLGQHYGLTLNDTPFA
                     DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSTCPRSQLINSIDILRARRATG
                     LMTRDNYRTVNNITLGKHPEKR"
     gene            complement(2169..2537)
                     /locus_tag="OQQ57_003183"
     CDS             complement(2169..2537)
                     /locus_tag="OQQ57_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /protein_id="HCS1957852.1"
                     /translation="MSDTLSGTTHPDDNDDHPWWGLPCTVTPCFGARLVQEGNRLHYL
                     ADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKAD
                     TLGSGGYVYLAVYPTPETKK"
     gene            complement(2700..2921)
                     /locus_tag="OQQ57_003184"
     CDS             complement(2700..2921)
                     /locus_tag="OQQ57_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HCS1957853.1"
                     /translation="MKIITRGEAMRIHRQHPASRLFPFCTGKYRWHGSAEAYTGREVQ
                     DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
     gene            complement(3008..3484)
                     /locus_tag="OQQ57_003185"
     CDS             complement(3008..3484)
                     /locus_tag="OQQ57_003185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HCS1957854.1"
                     /translation="MQQLSFLPGEMTPGERSLIQRALKTLGRHLHEPGVAFTSTHAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL"
     gene            complement(3500..3985)
                     /locus_tag="OQQ57_003186"
     CDS             complement(3500..3985)
                     /locus_tag="OQQ57_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HCS1957855.1"
                     /translation="MKTISHNSTTSSVSVTAASGNDQPQLVATLVPDEQRISFWPQHF
                     GLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNA
                     MNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII
                     D"
     gene            complement(4040..4861)
                     /locus_tag="OQQ57_003187"
     CDS             complement(4040..4861)
                     /locus_tag="OQQ57_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HCS1957856.1"
                     /translation="MRLASRFGYAANQIRRDRPLTHEELMHHVPGIFGEDKHTSRSQN
                     YTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEII
                     LLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVF
                     DRIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLW
                     SAYQTIQENMLKGGISGRSAKGKRIHTRAIHSIDTDIKLNRALWVMAETLLESLR"
     gene            4942..5153
                     /locus_tag="OQQ57_003188"
                     /pseudo
     CDS             4942..5153
                     /locus_tag="OQQ57_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001386164.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5274..5729)
                     /locus_tag="OQQ57_003189"
     CDS             complement(5274..5729)
                     /locus_tag="OQQ57_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957857.1"
                     /translation="MIHLFKTCMITAFILGLTWSAPLRAQDQRYISIRNTDTIWLPGN
                     ICAYQFRLDNGGNDEGFGPLTITLQLKDKYGQTLVTRKMETEAFGDSNATRTTDAFLE
                     TECVENVATTEIIKATEESNGHHVSLPLSVFDPQDYHPLLITVSGKNVN"
     gene            complement(5805..8321)
                     /locus_tag="OQQ57_003190"
     CDS             complement(5805..8321)
                     /locus_tag="OQQ57_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708766.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957858.1"
                     /translation="MLQIVGALILLIAGFAILRLLFRALTSTASALAGFILLCLFGPA
                     LLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTT
                     ALAAGLLVLPVQIRTIQQSGLTPEDISKEINGYYCCFYTAFFLMACSAYAPLIALQFD
                     ISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTLEEQPVLNSKSWLSSLQ
                     NDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWYERNMAGFNEQLKEN
                     LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICA
                     SCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDISERSYTGFISDATANGLILMKL
                     PETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEI
                     QTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKIREGKVP
                     GVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVISLAAGGISFALTAS
                     VFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTASPT
                     VRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLA
                     VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEED
                     RVKILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNM
                     LIKPLVVSIIRQRPVMEYDASHLGNMVNRLEEAFPPELPA"
     gene            complement(8442..11561)
                     /gene="ag43"
                     /locus_tag="OQQ57_003191"
     CDS             complement(8442..11561)
                     /gene="ag43"
                     /locus_tag="OQQ57_003191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Ag43"
                     /protein_id="HCS1957859.1"
                     /translation="MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGVAVALSLAA
                     VTSLPVLAADIVVHPGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQ
                     QIARGGTARNTTVTANGLQDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHA
                     GGSASGTVINQSGYQTIKHGGQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINK
                     NGRQVIWSSGMARDTLIYAGGDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQ
                     VIKEGGTTAHTTINQKGKLQVNAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVV
                     AGKADNVVLENGGRLDVLSGHTATNTRVDDGGTLDVRNGGAATTVSMGNGGVLLADSG
                     AAVSGTRSDGTAFRIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGSLAG
                     TTTLNNGATLTLSGKTVNNDTLTIHEGDALLQGGALTGNGRVEKSGSGTLTVSNTTLT
                     QKTVNLNEGTLTLNDSTVTTDVIAQRGTTLKLTGSTVLNGAIDPTNVTLTSGATWNIP
                     DNATVQSVVDDLSHAGQIHFTSARTGKFVPTTLQVKNLNGQNGTISLRVRPDMAQNNA
                     DRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGIQVVEAINGATTEEGAFVQGNMLQ
                     AGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGE
                     NNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYG
                     AAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSD
                     NNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSLDDGKDNAGYVKFGHGS
                     AQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRGD
                     MSMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHSINGSSAEGYN
                     SQATLNVTF"
     gene            complement(11895..12767)
                     /locus_tag="OQQ57_003192"
     CDS             complement(11895..12767)
                     /locus_tag="OQQ57_003192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase family protein"
                     /protein_id="HCS1957860.1"
                     /translation="MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGK
                     SGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDA
                     EYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPC
                     HEWDMAGIQPSPAQEQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALP
                     DHAASPLMTRLQDELRTESVRAQAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDT
                     VVSVARAVWNWIFF"
BASE COUNT         2940 a         3461 c         3408 g         3046 t
ORIGIN      
        1 cctttgcacc agaataaacg ccagagacct gaaattgcga gtacactaca gaaattgtac
       61 tgccggtccc atcagcataa aaccatagtt acacaggtaa tcatcattat tcgccaagat
      121 aataaatatt attcggtaga atagcgttct caggtggtca gtaaaattgt cttcaacaag
      181 atgtctgcgc atctcgtctg ctagccctac ataactgctc tcgaccgaaa ctatttattg
      241 aatgttcacc aaggtgggcg tggagacaaa atgacgtctt ttggtattag ctacctgagc
      301 cacatggtca aaacgttcaa gtagcatagc gaaaccaccc tgcccacgta atgtggacga
      361 tgcagcttcc agccagagca aacttgggac catcgactac aaaatgaaga atactgaact
      421 gcttttctgg caggcctata tactgcacgg atatgggtga tttcagacac aaaaaaagcc
      481 gctcttgagc gactcgattt gcatacggtg tggtgcgaag gccggactca aacatgtgac
      541 ttaacctcat gatttaaaat tgttaataat aaacaatatc atcttatacc aacacagata
      601 ccaacacgaa aaatcactgg ttttcggcat cgaaccagga caatcagctc ctgattgaga
      661 taccgagctc tgttactcgt catcttcctc gacaggcttc attgcatcaa gtagtactcg
      721 caccatcgcg atagaaccaa tccggataaa agcatcttct ccatctatat ctgttaactg
      781 atatcgctca cttgatgccg gataattgtg tcgatttgca gcagtgaact ctttcgtaca
      841 gccagaatgc ggcggatgct ggttgagcag ataacgtccg tattctcgtt gaccacttcc
      901 ggacggtagg ctgtgatatc agacataatc gatattcctt tttgcagata aatgaaaatg
      961 ccagccctgt tcaggctggc gtcagtggaa tgaagtctgg tgagtaagac tcaccggttc
     1021 tggtgctgaa gctgcagttg gcgcagggta cggatatctt ctctggcctg ttcgatacag
     1081 ggcaacagtg ctgctgaatc cgttttatcc tcattgttgt caaagataat tcccgattcg
     1141 cagtcgatat tgtcctgcag ccacgcaatc agaatatcca gtgcggtttc cgtggttaat
     1201 gatttcatgt tgttcctggt taccagttga aagtgggtaa acccggcagg cattcagcgc
     1261 tggcatccag atgaatgaga ctgacgccat aacgtcgggt aagcgtgata accagacgac
     1321 ggaacgtttt tgacagcccc aggcgtttaa gccgcagaac cggatatgac cacgcatcgg
     1381 tacgtaacag atatccgcta cctgtgaaat gaatccattc tgattcacca acgtcactgg
     1441 tctgatgcga cagcgagtac agccaggcgt tatccttttc cgtgatatgt gcggtactgc
     1501 agcgtatgcc ggcaagggtt gcaaacggtg gtagtgtgca ggttgactgt tggtcggatt
     1561 cctccaccac gcggagtgaa taaccgtttt cagcgacctt gttaatcagt tcagtgagat
     1621 taacaccatc gacgtcaacg ataattcgcc ccatgttcag tgcctgcaca ttaattctgt
     1681 cggcttccag catcagggaa agtttcatcg tttctccgga tgcttaccca gggtaatgtt
     1741 atttaccgtt ctgtaattgt cgcgggtcat caggccggtc gcccggcgag cccggaggat
     1801 atcaatactg tttattaact gagagcgggg acaagtgctg aatcccggct ggtcggtacg
     1861 caccagcgcg tatttttcca cgagaaaatt caccgcatca cacagtgaaa tgccagcttc
     1921 aatatgctgc tcaatcacac gttcatcggc gaacggtgtg tcattcagtg taaggccgta
     1981 atgctggccc agtagtcggg agagcagagt ctgccagatg gtgacgggag acgggcagct
     2041 cgatgcctcc cgtacgtgtg tatcgggtaa tgttttcata ctgaaggttt tcctgatatg
     2101 cagagatgaa aaatggaaaa gtggcgtggt gaaagcacca ggccggagca gaaggttatt
     2161 ccggtggttt actttttcgt ttcgggcgtc ggataaacag ccagataaac gtaaccaccg
     2221 ctaccgagag tgtcagcttt gcaggtcaga ccttttgcat acagcgtgac ggtatgctga
     2281 tggcggggat tcagttcacc gctggtgagc atgagttcca gttgtttcat cagtagcgga
     2341 aaggcctggt ccaggtggta cgcatctgca tcgctgaaca ggcctctgat accggcgcgg
     2401 tcggcaaggt aatgcaggcg gttaccctcc tgcaccagac gggcgccgaa acagggcgtc
     2461 actgtgcagg gtagtcccca ccagggatgg tcgtcattgt catcgggatg cgttgtcccg
     2521 gaaagtgtgt ctgacacgat aaaatcctca cagaaaatcg gtgaatgata gtttaacgat
     2581 gacgggtcag ccggcgcgca gaccggcttc ggtaaaggtg tattcgttga tgagcaggac
     2641 ctcatccaca gcggcgtctg agctcagcca gtcgtactcg ttttccgggt gacggaacat
     2701 cagttcaggg tgacgctcat cagccggaca tacggaccaa aactgtcctt acggcgttct
     2761 gcaaacacgg ccagcacacc gggaatatcc tgcacttcac gaccggtata cgcttcagca
     2821 ctaccgtgcc agcggtattt accggtacag aacggaaaaa gacgggatgc aggatgctga
     2881 cggtgaatac gcatggcttc accacgggtg atgattttca tgagaatagt cctcctgaat
     2941 gtgaaagtaa gaaacagctg agaaagagaa actgaagtga tatgaaggtg attgtgacgg
     3001 tgacgggtta aagcagaccg tgttcggcaa aggagaaaac ctggctgcca ccgactatca
     3061 gatggtccgg tacccggata tcaaccaggg ccagtgcctg taccagacgc tcagtgataa
     3121 ggcggtctgc cttgctgggg gtgacttcac cggacgggtg attgtgcgcc agcaccacgg
     3181 cagcggcatt gtggtacagg gcgcgtttaa tcacttcccg gggatggact tccgtacggt
     3241 tgatggtgcc ggtgaagagg gtttcaccgg caatcagctg attctggttg ttcagataca
     3301 gcacccggaa ctcttcacgc tccagtcccg ccatgttcag aatcagccat tcccgtgccg
     3361 catgcgtgga ggtgaaggcc acgccgggtt catgaagatg gcggcccagg gttttcaggg
     3421 cccgttgaat gaggctgcgc tcaccgggtg tcatctctcc gggcagaaag gaaagctgtt
     3481 gcattgtact tctctccatt cagtcgatga tgcgcataat ggcgctgcat tccggatgct
     3541 gcagggcgta atcccgcagc cggtaataat ggaccgtcat ggcataacac tccgtacgac
     3601 aggcatgatg actgtacgtc atcagacagg cagcaatgcc ggcagcttcc ggactcattt
     3661 cagcgcggtt accgttcatg gcattgaaca gtacccatgt ttcgtcatca tcgtcatccg
     3721 gttcgggtgc cataaatgcc ccgccgttgt tcagggtgta cagattccag ataccaccgc
     3781 agtagtcttc acacagacgg tccatccagc cgaagacacg gggctccagg gtcacccact
     3841 gtggaatgag gccaaagtgc tgcggccaga agctgatgcg ctgttcatca gggacgaggg
     3901 tggcaaccaa ctgaggctgg tcattccctg atgcagcggt tacggaaaca gaagatgtgg
     3961 tggaattatg tgaaatggtt ttcatgaaat gactccttaa aggacaaata aatgcgtggt
     4021 tttcagggta atggctgaat cagcgcaggc tctccagcag ggtttccgcc atcacccaca
     4081 atgcgcggtt gagcttaatg tcagtgtcaa tgctgtgaat ggcacgggta tggatacgtt
     4141 ttcctttagc gctgcgacct gaaattccgc ctttcagcat attctcctga atggtctgat
     4201 aagcactcca caggtcctta ccgtaatcct cccggcgtcg tggcgtcaga atgtcggcgg
     4261 tggtgacggg ctgatgttcg tcaccataac ggtaagtcag tgccgcctgt gccagcgcct
     4321 ggcgtgccgg tggcggcaga atcagcgact gcatggcatc acgcttttcc tcaatccggt
     4381 caaacacgcc caccacctcg taagcccctt caatgactct gtccaccaca tttccccggt
     4441 gcggaacacg cacttccccc agagactgac cacagacgca tccgttctgg cagacgaacc
     4501 tgaagtaacc cggcagcatc tggtagctgg aggtaccgtc atgagagttg agcagaataa
     4561 tttcagggac atgttctccg tttatctctc cggcccgccg cagacgcagc atgtgttttg
     4621 tgtatccccg gcggcccggg tcgcgcacac gggtctggca ggcgaaaaag ggctgaaaac
     4681 cttcccgctg caggctttcc agtacggtga tagtggggat gtacgtatag ttctggcttc
     4741 gggacgtgtg tttatcttcc ccgaaaatcc ccggcacatg gtgcatcagc tcttcatgtg
     4801 tcagtgggcg gtcacgacgt atctggtttg cagcataacc aaaacgactg gctaatcgca
     4861 tactttgctc cttatcggtg gttaagattt actggtgtaa taaatgaaaa aagccgcgtc
     4921 tcccggagaa gacgcggcct gatggatgaa atcaatgagg tttattgtct gagaagccct
     4981 ccactggcga gccacgcatt aagctgtttt ccggcatcag cttcagagtt ccggctgcgt
     5041 cagcgtcgct gaccttccgc gttgcggata acccgacgaa aatgcattcc cgggtcatcc
     5101 tggataaaca cattgcggta agcggttatg acagcaaccg cctgcccgta tgagaaagat
     5161 ccttcagcca ggacatactc tgtgtaaccc ggcatatctg ttttctcctg ataaataaaa
     5221 agcctctgcc acgcgttgtg acagaggctg aagcatgaaa ctgacttcag ggatcagtta
     5281 acgttttttc cggaaacggt aatcagcagt ggatggtagt cctggggatc gaaaaccgat
     5341 aacggcagac tgacatgatg gccgttactt tcttcagttg ctttaatgat ttcggttgtg
     5401 gcgacatttt ccacgcactc cgtttccaga aatgcgtctg tggttcgcgt ggcattactg
     5461 tcaccaaagg cttccgtttc catttttctg gtcaccagcg tctgaccata tttgtctttg
     5521 agttgcagag tgatggtgag ggggccaaat ccttcatcgt ttccgccatt atccagccgg
     5581 aactggtagg cacaaatatt tcccgggagc catatcgtat ctgtattgcg tatactgatg
     5641 taacgttgat cctgtgcccg gagtggggca gaccacgtta accccagaat gaaggcggta
     5701 atcatgcagg ttttgaacag gtgaatcatg gtatttacct ctctgagtca tgacgatgac
     5761 actgacaaat caggtgataa aacgtaaaag gcgcagaata gccgttatgc cggtaactcc
     5821 ggggggaatg cttcttccag tcggttaacc atattgccga gatgggatgc atcatattcc
     5881 atgacggggc gttgcctgat gatactgacc accagtggtt tgattaacat attggtcgcg
     5941 gcccgttgtt gtataccggc ggcgaaaatg atctccagag cattctgatc gataacacgg
     6001 gccagattct cgttcagatt ttcaatctca tgtccggtca gcaggaaact gccggcaagc
     6061 catgtcacct gctcctgaat cattgccaga attttgacgc gatcttcttc aaccagcgct
     6121 ccggcaattt ttcctgatac agcggaggca atcattcccc ccagaacacc gccaaccaca
     6181 cgccctgtca gtgcaccaaa tggtcccagt ggactgaaca gtattccgcc cgccactgac
     6241 ccgacagcac cacctgccac accggaagat gccacggcaa gattcctgat gaactgcgca
     6301 ccggagatcc gtccccgcaa cattttgatc atgtcagggc cggttgtgac agctaccagt
     6361 gccagagatg tcaccagcgt acccttcatt actttgttca gggcactgat atttcctgca
     6421 ccggtcccct tctgaagagc cagtcggaca gtcgggctgg cagtcgaaaa atcaatgtgc
     6481 ttcagcatac cctgaacaac actgagccgg tggagttgct gggttgtgac gtagacagcc
     6541 agtgtgcggg tgaaggtttt tcctgcctgg acagcagctg tctgcagggc agcatcgcga
     6601 tcgccggtgc tgagccagaa gaccgatgcc gtcagggcaa aactgatccc tccggccgcc
     6661 agactgataa ccgacccctc ggcaatatca taagtgaccg attcgatggt cccgaaccgg
     6721 gtgatattac gggcctgggt ataagtcaga tgtccccgac gaatcagccg ggacgcttct
     6781 gcgggatcgg ttacaccggg tactttacct tcgcggatct tattcttcat ggtttccaca
     6841 gcgccggcat actgatcacg ggggacttcc agttgcatgg gaccatgatt tcccatgtaa
     6901 cgatactgtc cgttttgtcc gtcgaatgcc gcaccgacgc tacgggctgc agttgaacaa
     6961 tatttcgtct ggatttctgt tccgctgacc agtctgtctg ctccatttct ggcattatta
     7021 tcaccgagga tccgtgcgtt tttcagacgg actctgtcga caatatggtt tccccgttca
     7081 gcggcaaacc catgtccctg ccctccggaa gcaaacattt tctcatttgt actccaggtt
     7141 tccggcagtt tcatgagaat cagaccattc gccgttgcat cggaaataaa accggtgtaa
     7201 gaacgttcag aaatgtcctg acacagtgtt tctgtttcgc gacaaagaga ggagcagtac
     7261 cattccggat ccggcttatg attttccggg gcatgatgta cttctgtcag cccgcaggag
     7321 gcacagatac gaagctcatc cacgtggtgg aatgatacaa aacggcggcc ttctgaaaag
     7381 gggtaccagt caccgccgtc caggcaacga tcgagaaaat cgtcattcgc ttccggtgat
     7441 aaattcaggc ggttccggaa gagcgttttc agttcatcag gtgtgaatga caggttctct
     7501 ttcaactgtt cgttaaaccc tgccatgttt ctttcatacc aggcattgtc cagtagccag
     7561 tttccgtctg ccagttcaaa ttccctcagt tctccccggg aaatccgttg tgaaatgagt
     7621 gtcagccaga tgcgctccgt cagcgtttca ggaaggctgt aatcgttttg caaactgctc
     7681 agccacgatt tactgttgag caccggttgt tcttccagtg tctggctgat ggcactggtc
     7741 agtcttttca gcgcctggat ctggctggcc gcccatagca gcgtcactaa tgcagccagc
     7801 cagtacaaca acccgcccca ccacatcagt gagggtgaaa tatcgaactg caatgcgatc
     7861 aatggtgcgt atgcagaaca cgccataagg aaaaaagcag tataaaaaca gcagtaatac
     7921 ccgttaattt ccttgctgat atcttcaggt gtgagcccgc tctgctgaat ggttcttatc
     7981 tgcacgggaa gaaccagcag accagcggcg agagcggtgg tcagaataaa ttttacagag
     8041 tcaaaagtat gagcctccag tgcgatatgt ttaccatcaa gtccccacat gaagctgatg
     8101 atcattccgg caatcgtcag aaatacgcct gccagccagc gaatatggaa taaccgggtt
     8161 atgcgttcag tgatatagcc agccagtaaa gccggaccga acagacacag caatatgaac
     8221 cctgccagcg cagacgctgt gctggttaat gctctgaaca aaaggcgaag aatggcaaat
     8281 cctgcgatca gcagaatcag cgcgccgact atctgtaaca tagtcactcc gtgatgaata
     8341 tcatgttatt gtgaatgcca gtgaatgtgg cactgaaacg ttttcccccg tccgggtccc
     8401 ggtcatgatg accgggacca cagagaggca atgcagaatt atcagaaggt cacattcagc
     8461 gtggcctgac tgttataacc ttcagcgctg ctgccgttga tgctgtgggc ataaccggcc
     8521 tgaacgccca gggtgatgtt ttcccggaca cgggcttcca gtccggcctg caggtccagt
     8581 gacgtaccat tctgtgacgg tgagaacgtc atgttactgc cggctgcggc tgtacccatg
     8641 ctcatgtccc cccgggaact gaaggtgcgg ataacagaag gctgtaccca ccagttcacc
     8701 ggcagttcac gcacactgtg ttttgcactg tcgcgcaggg tgtcacggga tgaggtgcct
     8761 tcaccaaagg tcatatcgtt gtggctgccc aggcggaaac cggcacgcac atgttgtgca
     8821 ctgccatgcc cgaacttcac ataaccggcg ttgtccttac cgtcatccag ggagagcccc
     8881 tgccaggtgt actgcagtcg tggctccagc atcaggttgt cagtgatact gaagggcaga
     8941 ccggtttcca gtgaacccag ccagccccgg ccccgggcgc ggaagtcgtt attgtccgat
     9001 gatgctttca tgctgtggcg ggttccctgt gccacaatgt cagcccacag gccggaggat
     9061 gtatgtgtca gattcaggta tccgcccagg ctgccggcat catcccggac cgtgccggcg
     9121 cgggagccgt catcatcctt aacatcaacg gaagaatggc ctgcagcacc atacactcct
     9181 gtcgtcagtg acataccggc gacctctgtt ctgagcaggt caccctccag acggacgaag
     9241 ccatagctgc cgctgctttc cggcgtggcc ccacgggcaa taccgccgtt gttatcgtga
     9301 ccgagatggc cgccctgaat gctgagacgg acgctgttat tttcaccgtt tacaccggtc
     9361 tgatggctgc gtgagcctgc cagaatccgg tcatagtcca ttgcctgtgt cagcatggag
     9421 gcgtacaggg ggacttcagc acgataacgt tcttcactgc gcagatacca gctctcatca
     9481 ctgtcccggt tgagggtgta gttaaaggcc ccggcctgca gcatattccc ctggacaaaa
     9541 gccccttcct ccgtggtggc accgttaatg gcctcaacca cctgaatacc cttaccggtg
     9601 gtcgccagcc ccgtaccact gttgccggcg ttcaccagat tcaggatggt ttttccggtt
     9661 gccctgccac cgtcaatgac cagtctgtca gcattgttct gcgccatatc cgggcgtaca
     9721 cgcaggctga tggtgccatt ctgcccgttc aggtttttca cctgcagagt tgtcggaacg
     9781 aacttccctg tgcgggcgga ggtgaaatga atctgtccgg catggctgag gtcatccacc
     9841 accgactgaa ccgtggcgtt atcggggata ttccaggtgg caccggatgt cagggtgaca
     9901 ttcgtggggt caatggcacc gttcagcact gtgctgccgg tcagcttcag ggttgtaccg
     9961 cgctgagcaa tgacatccgt ggtgacggta ctgtcgttca gcgtcagcgt gccttcattc
    10021 aggttgacgg ttttctgggt gagtgtggtg ttgctgacag tgagtgtgcc acttcctgat
    10081 ttttccaccc tgccgttacc ggtaagagcg cctccctgca ggagtgcatc accttcatgg
    10141 atggtcaggg tatcgttatt caccgttttc ccggaaagag taagcgtggc accgttattc
    10201 agcgtggtgg tgcccgccag cgagccccct ctggcagtga acagtccgcc atttaccgtg
    10261 gtatccgtgg ccgtatcacc ggcgttcagc gtgaatgaac tgcctttttc cagcatcagg
    10321 gcatccgcct gaccgcctcc gatacggaat gccgttccgt cgctccgggt accactgaca
    10381 gcggccccgg aatcggccag cagtacaccg ccattcccca tggatacggt ggtggcggca
    10441 ccaccgttgc ggacatccag cgttccgcca tcatccacac gggtattagt ggctgtgtgt
    10501 ccgctcagca catccagacg tccgccattt tccagtacga cattatcagc cttacccgcc
    10561 acaacggaga atgctcccag gcggtttgtg ccggtgacgg ttgcagctgt gctggtaacc
    10621 agtgcacctc ccgtgttctg ggtgacatca gacgctttac cgccggcatt cacctgcagc
    10681 tttcctttct ggttgatggt ggtatgcgcg gtagttcctc cttccttaat cacctgccag
    10741 cccccctcgt taattaccgt gttcagcgca agtccgtatt tgtgcacata ctggtttcct
    10801 ccctccagcc gggtgttatg tgcctcgccg tgtaccgtct ggtcaccgcc ggcgtaaatg
    10861 agggtgtccc gtgccatccc cgaagaccag ataacctgcc ggccattttt gttgatggtg
    10921 gtggattcag ccgtccctcc aaccatctga ccgctggaca cattttcaga ctccggacca
    10981 ccttctgcac cggtgttgac gatggttccg gttgcctgcc cgccatgttt aatggtctgg
    11041 tagccagact ggttaatcac cgttccggat gcactgccgc ctgcatgtat ccattgttca
    11101 ccaccgttaa ggacagtacc gtaagcctgc ccgcgcagat tctgtcctcc accggcactg
    11161 ataaccgtat ccgtggcact gccacctgcc atgacatcct gcagaccgtt tgcggtgacc
    11221 gtggtgtttc tggcagtgcc accccgggct atctgctgac cgccggtgtt gtcatcagag
    11281 tccggcccca gctcaagccc ggtactgaca gtcacgccat cagctgttcc ggatacaaac
    11341 tggttgtcat ggtttaccag tgttccgcca ttcactgttt cacccgggtg cacaacgatg
    11401 tcagcagcca gcaccgggag tgacgtgact gcggcaagag acagtgcaac cgccacaccg
    11461 ccacgtttac cccgtgcgcg ggccagttcg gaggcaacca cgaaagcgcc cgtaatgtga
    11521 ttccatacca gcctgtagca ggtattcaga tgtcgtttca tcagcatttc cttaatcaga
    11581 gtgagggtga ataaaaaagc cggtatccac agatgtggat accggcaggt aaagggttac
    11641 agtgccggag gtccggctga cggaagtttc tgacgtgtgg ctctgttgtt ccctgaatct
    11701 catgtctgtg tgtatctgcg cacgttgcta acaggagtta ttattagcat aacgatcgat
    11761 ataaacgatc gataaaatgg atatcgatcg ttttattcta ttatcaggct attgcacgga
    11821 caagagagac agtaacgaaa acagcgcttt tgtgagcaga ctcagaggca gggaggacat
    11881 catccacaac aggttcagaa gaagatccag ttccataccg cgcgggcaac agagaccacc
    11941 gtgtcacgga cggcacgcag aaccgtacgg gcaacagagg caacacagac gctctccgcc
    12001 gtgtcaaata tccggtccac cgcaccggta aactgttcac gggcctgagc gcggacagat
    12061 tccgtgcgca gctcgtcctg caggcgggtc atcaggggac tggcggcatg gtcgggaagt
    12121 gctgtcatta gcgcactgac cagcgtatcc agttcccagc cggtgcgggc cgatacggca
    12181 acaaccggat gtacgggccg gaacagacgg aataccgcct ccgttttctc acgaatgttc
    12241 tgttcctgtg cgggagaagg ctgaatacct gccatatccc attcatggca gggttccgtt
    12301 ttgtcagcct gcgtcaccac aaacagcacc tgctgatgtc cgcactgcag gatgtgtcgc
    12361 cagaaatact catccacaga cagggcccgg tcatcggctt taatcagcca cagcaccagg
    12421 tccagttcag gcagaatgtc acggtacagg gcttcatact ctgcatccct gtcccggctc
    12481 tcgcccaccc cgggcaggtc agtgataacc atgctgtgac cgtgaccact cagacggaag
    12541 cgctgcactt cccgggtgcc ggcgtgaaca tcactgaccg gtgtgacctc cccctgaaac
    12601 agtgcattac agagtgaaga tttaccggcc ccgcttttac ccataatgcc aatcacgggt
    12661 tcgtgactgg tgagtttgcg cagatgttcc aggatgtgac gggaaagtga gtaaggcagg
    12721 gaggagagcg gtttttcaat tgcctcaatg gcatcagacg gattcataca tgtattcccg
    12781 gtgaaaaaag acaaaacccc gcgcaccgga aaggtggcgg gggattcacg gagataatat
    12841 ctgtctgaga ttatt
//
LOCUS       DAJVUK010000127        12738 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.127, whole genome shotgun sequence.
ACCESSION   DAJVUK010000127 DAJVUK010000000
VERSION     DAJVUK010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12738
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.127"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..471
                     /locus_tag="OQQ57_003193"
     CDS             <1..471
                     /locus_tag="OQQ57_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001589353.1"
                     /note="type IV secretion system coupling protein; similar
                     to F plasmid TraD; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
                     /protein_id="HCS1957861.1"
                     /translation="YQERPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP
                     DVPEVVSGEDVTQAEQPQQPVSPVINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLP
                     PGISESGEVVDMAAYEAWQQENHPDTWQQMQRREEVNINVHRERGEDVEPGDDF"
     gene            complement(480..878)
                     /gene="vapC"
                     /locus_tag="OQQ57_003194"
     CDS             complement(480..878)
                     /gene="vapC"
                     /locus_tag="OQQ57_003194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HCS1957862.1"
                     /translation="MLKFMLDTNICIFTIKNKPASVRERFNLNQGRMCISSVTPMELI
                     YGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHTGQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIIVTNNTREFERVGGLRTEDWS"
     gene            complement(878..1105)
                     /gene="vapB"
                     /locus_tag="OQQ57_003195"
     CDS             complement(878..1105)
                     /gene="vapB"
                     /locus_tag="OQQ57_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HCS1957863.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAG
                     ETWDEWFDGHSVSADFMDNREQPGMQERESF"
     gene            1187..1606
                     /locus_tag="OQQ57_003196"
     CDS             1187..1606
                     /locus_tag="OQQ57_003196"
                     /inference="COORDINATES: protein motif:HMM:NF020332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative relaxase"
                     /protein_id="HCS1957864.1"
                     /translation="MMSIAQVRSAGSAGNYYTNKDNYYVLGSMGERWAGQGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IEAHNQAVDFAVRHHPCGGTGLHTDDDGRTVRNGADR"
     gene            1593..6464
                     /gene="traI"
                     /locus_tag="OQQ57_003197"
     CDS             1593..6464
                     /gene="traI"
                     /locus_tag="OQQ57_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005079803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HCS1957865.1"
                     /translation="MLTGNLVMALFNHDTSRDQEPQLHTHAVVTNVTQHNGEWKTLSS
                     DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFS
                     GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRD
                     AAEQRAYTRTQTPGPASQDGPDVQQAVTQAIAGLSERKVQFMYTDLLARTVGILPPEN
                     GVIERARAGIDEAISREQLIPLDREKGLFTSGIHMLDELSVRALSRDIMKQNRVTVHP
                     EKSVPRTAGYSYAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA
                     ADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA
                     ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRYVRYARL
                     AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDS
                     RSRYLRDMYRPGMVMEQWNPETRSHDRYVTERVTAQSHSLTLRNAQGETQVVRISSLD
                     SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT
                     LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY
                     SSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALP
                     VLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKRGDLLYVDVAKGYGTGLL
                     VSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAAARMILETSDRFTV
                     VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFL
                     HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA
                     IAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVERALSGLERVKPSQV
                     PRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYAAIVRDYTGRTP
                     EAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGQVQVMVPVLNTANIRDGELRRLST
                     WENNPDALALVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI
                     RVGTGDRIRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRVIRPGQERAEQHID
                     LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW
                     TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS
                     PARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDA
                     QFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD
                     IPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTE
                     QAVREIAGQERDRAAITEREAALPESVLREPQRVREAVREVARENLLQERLQQMERDM
                     VRDLQKEKTPGGD"
     gene            6484..7230
                     /gene="traX"
                     /locus_tag="OQQ57_003198"
     CDS             6484..7230
                     /gene="traX"
                     /locus_tag="OQQ57_003198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus acetylase TraX"
                     /protein_id="HCS1957866.1"
                     /translation="MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVLC
                     AGKSLPRFWPGDFFPTFYACHLAVLGVLAL"
     gene            7285..7845
                     /locus_tag="OQQ57_003199"
     CDS             7285..7845
                     /locus_tag="OQQ57_003199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HCS1957867.1"
                     /translation="MTEQKRPVLTLKRKTEGTATVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEA
                     YAGARLAKIRRQNRIKAELQAVLDEK"
     gene            7976..8188
                     /locus_tag="OQQ57_003200"
     CDS             7976..8188
                     /locus_tag="OQQ57_003200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HCS1957868.1"
                     /translation="MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAAC
                     VAPRTDWQQFARKRAEHCHRRCRGRG"
     gene            8432..8893
                     /locus_tag="OQQ57_003201"
     CDS             8432..8893
                     /locus_tag="OQQ57_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HCS1957869.1"
                     /translation="MRKYIPLVLFIFSWPVLSADIHGRVVRVLDGDTIEVMDSLKAVR
                     IRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNIN
                     QFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK"
     gene            8939..9148
                     /gene="hha"
                     /locus_tag="OQQ57_003202"
     CDS             8939..9148
                     /gene="hha"
                     /locus_tag="OQQ57_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HCS1957870.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNSERESFNSAA
                     DHRLAELITGKLYDRIPKEIWKYVR"
     gene            9187..9777
                     /locus_tag="OQQ57_003203"
     CDS             9187..9777
                     /locus_tag="OQQ57_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HCS1957871.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSSGEYWQRQTTLLTEREVSFMKGLFRIVDMTRWYLCPQVRVADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            10017..10277
                     /gene="repA"
                     /locus_tag="OQQ57_003204"
     CDS             10017..10277
                     /gene="repA"
                     /locus_tag="OQQ57_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HCS1957872.1"
                     /translation="MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEI
                     KVFVKNPLKDLMVEYCEREGITQAQFVEKIIKDELQRLDILK"
     gene            10501..10575
                     /gene="tap"
                     /locus_tag="OQQ57_003205"
     CDS             10501..10575
                     /gene="tap"
                     /locus_tag="OQQ57_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001370046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HCS1957873.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            10568..11425
                     /gene="repA"
                     /locus_tag="OQQ57_003206"
     CDS             10568..11425
                     /gene="repA"
                     /locus_tag="OQQ57_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HCS1957874.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSR
                     FDFAIHVAHARSLGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQTELKSRGMK
                     RARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(12477..>12738)
                     /locus_tag="OQQ57_003207"
     CDS             complement(12477..>12738)
                     /locus_tag="OQQ57_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HCS1957875.1"
                     /translation="QAAAFLGVVPVEKYSGTSVRGCPKLSKIGPPEIRAKLYLASLCG
                     LRFNPLMKAMYERLCLRGKAKMCAIGALMRKLVHWCYGVLKT"
BASE COUNT         3087 a         3211 c         3781 g         2659 t
ORIGIN      
        1 tatcaggaac gaccgaaggt cgctccggag tttattccgc gtgacatcaa cccggaaatg
       61 gagaaccgtc tgagtgccgt acttgccgca agggaagcag aaggtcgtca gatggccagc
      121 ctcttcgaac cggatgtccc ggaggttgtt tccggagaag acgtgactca ggctgaacag
      181 ccgcaacagc cggtgtctcc tgtcatcaac gataagaagt cagattcagg tgtgaatgtt
      241 ccggcagggg ggatcgagca ggagctgaaa atgaaaccgg aagaagagat ggaacagcaa
      301 ctgccacccg ggatcagtga atccggtgaa gtggtggata tggccgctta tgaggcatgg
      361 cagcaggaaa atcatccgga cacctggcag cagatgcagc gtcgtgaaga ggtgaacatc
      421 aatgtgcacc gggaacgcgg ggaggatgtt gagccgggag atgatttctg atgaacaggt
      481 cagctccagt cttcagttct caggccgccc acacgttcaa attcccgggt gttattagtc
      541 acaataatca gcccccgact gcgggcatga cctgcgatca tttgatcaaa tggcccgaca
      601 gggcgtccct gacgggcaag ttctgctctt atctggccgg tgtgtgtggc tgcagcagcg
      661 tcgtaatcca gaacatcaat gcgggaaaca aatccctcga tcacagcgag attacgttca
      721 ggcatctggc ttttttctgc accatatatc agctccatcg gggtgaccga actgatacac
      781 attctcccct ggttcaggtt aaaacgctcc ctgacgctgg cgggtttgtt ctttatcgta
      841 aaaatgcaga tgttggtatc gagcataaac ttcagcatca gaatgactcc ctttcctgca
      901 tgccgggctg ttccctgtta tccataaaat cggcgctgac gctgtgtccg tcgaaccatt
      961 cgtcccatgt ctctccggct ggcgtaatga ttctggttcg tccgacagca atcacttcaa
     1021 cgcgttttac gttttccggc aatgcaaccg cttttggcag tctgaccgcc tggctgcggt
     1081 tgctgagaaa tacggtggtt tccattattt gcctccttat gtggatatgt cttgtgtata
     1141 tccattgtgg gattgatgcc gggatatgtc aaagggatat acgtttatga tgagtatcgc
     1201 gcaggtcaga tcggccggaa gtgccggtaa ttattatacc aacaaggata attactatgt
     1261 gctgggcagc atgggagaac gctgggccgg ccagggggct gaacaactgg ggctgcaggg
     1321 cagtgtcgat aaggatgtct ttacccgcct tctggagggc aggctgccgg acggggcgga
     1381 tttaagccgc atgcaggatg gcagtaacag gcatcgtccc ggctacgacc tgaccttctc
     1441 cgctcccaaa agtgtctcca tgatggccat gctcgggggg gacaaacgtc ttattgaagc
     1501 acataaccag gccgtggatt ttgctgtccg tcatcacccg tgtggaggca ctggcctcca
     1561 cacggatgat gacggacgga cagtcagaaa cggtgctgac cggtaatctg gtgatggcac
     1621 tgtttaacca cgacaccagt cgcgatcagg aaccacagtt acacacgcat gcggtggtga
     1681 ctaatgttac gcagcataac ggcgaatgga agacactgag cagtgacaaa gtggggaaaa
     1741 cggggttcat tgagaatgtg tacgctaatc agattgcctt tggcaggctc taccgggaaa
     1801 aactgaaaga gcaggttgag gcgctgggct atgaaactga agtggtcggt aagcacggta
     1861 tgtgggaaat gccgggtgta ccggtggagg ccttttccgg acgctcacag actatccggg
     1921 aggccgtcgg ggaagacgcc tcgctgaaat cccgggatgt ggcggcgctg gatacgcgta
     1981 aatccaaaca gcacgtcgat cctgaagtca gaatggccga gtggatgcag acgctgaagg
     2041 aaaccgggtt cgacatccgg gcatatcgtg acgcagcgga acaacgggca tatacccgca
     2101 cgcagacacc cggacccgct tcacaggacg ggccggatgt gcagcaggcg gtgacacagg
     2161 ccattgccgg attaagtgaa cgcaaagtgc agtttatgta tacggacctg ctggccagga
     2221 cggtcggcat actgccgccg gaaaatggtg tgattgaacg ggcacgcgcc ggtatcgatg
     2281 aggccatcag ccgtgagcag cttatccccc tcgatcgtga gaaggggctg ttcacgtccg
     2341 ggattcatat gctcgatgag ctgtcagtcc gggcactcag tcgtgacatc atgaaacaga
     2401 accgggtgac cgtacatccg gagaaaagtg tcccccggac ggccggttac agctatgccg
     2461 tcagtgttct ggcacaggac cgtccgtcgc tggccattgt gtccgggcag ggcggtgcag
     2521 ccgggcagcg tgagcgggtg gctgaactgg tcatgatggc ccgggagcag gggcgggagg
     2581 tgcagattat cgctgctgac cgtcgctcgc agatgaacct gaagcaggat gaacggctgt
     2641 ccggtgaact gataaccgga cgtcgtcagt tgctggaagg catggccttc acgccgggca
     2701 gtaccgttat cgtcgaccag ggcgaaaaac tctccctgaa agagacgtta accctgctgg
     2761 atggtgccgc acgtcataac gtacaggtcc tgataactga cagcgggcag cgaaccggta
     2821 caggcagtgc actgatggcc atgaaggatg ccggggtgaa cacatatcgc tggcaggggg
     2881 gagaacagcg accggccacc atcatcagtg aaccggaccg ttatgtccgc tatgcccggc
     2941 tggccggaga ttttgcggcc agcgtgaaag ccggagaaga gagcgtggca caggtcagcg
     3001 gagtacggga acaggccata ctgacacagg ccattcgcag tgagctgaaa acacagggcg
     3061 tgctcggaca cccggaggta accatgaccg ccctgtcacc ggtctggctg gacagccgga
     3121 gccgttatct gcgggatatg taccgcccgg gaatggtgat ggagcagtgg aacccggaga
     3181 cacgcagtca tgaccgctat gtgacagaac gtgtgacggc gcagagtcac agcctgaccc
     3241 tgcggaatgc gcagggcgaa acgcaggtgg tgcgtatttc ttccctggac agcagctggt
     3301 cgctgttccg gccggaaaaa atgccggtgg cagacggtga gcgtctgagg gtgacaggga
     3361 aaattcccgg actccgcgtc tccggcggtg accgcctgca ggtggcatcc gtcagtgaag
     3421 atgcgatgac ggttgttgtg ccgggacggg ctgaaccggc caccctgcct gtgagcgatt
     3481 caccgttcac ggcactgaag ctggagaacg gctgggtgga aacgcccggg cattccgtca
     3541 gcgacagtgc gacggttttt gcctccgtca cacagatggc aatggacaat gccaccctga
     3601 acggtctggc ccgcagtggt cgtgatgtcc ggctgtattc ctcactggat gaaacccgta
     3661 ctgcggaaaa acttgcccgc catccttcct ttacggtggt ttctgagcag ataaaggcgc
     3721 gtgccggtga gacattgctg gaaaccgcta tcagtctgca gaaagccggg cttcacacgc
     3781 cggcacagca ggccattcat ctggcccttc ctgtgctgga aagtaaaaac ctggccttca
     3841 gcatggtgga cctgctgaca gaggcgaagt cgtttgctgc agaaggaacc ggttttgctg
     3901 acctgggagg ggaaatcaat gcgcagataa aacggggtga tttactgtat gtggatgtgg
     3961 caaaaggcta tggcacaggc ctgctggttt cccgtgcgtc gtatgaggca gaaaagagca
     4021 ttcttcgcca tattctcgaa ggtaaggagg cggtcacgcc gctgatggag agagtacctg
     4081 gcgaactcat ggagaaactg acatcaggac agcgcgccgc cgcccgtatg atactggaaa
     4141 cgtccgaccg tttcacggtg gtgcagggct atgccggtgt gggtaagacc acacagttcc
     4201 gggcggtgat gtcagccgtg aacatgctgc cggagagtga acgtccccgt gtcgtggggc
     4261 tggggcccac acaccgtgcg gtcggggaga tgcgcagcgc cggcgtggat gcacagacac
     4321 tggcgtcctt tctgcatgac acgcagctgc agcagcgcag cggagaaacg ccggatttca
     4381 gcaacacgct gttccttctc gatgagagct ctatggtggg caataccgac atggcacggg
     4441 catacgccct gattgcggcc ggtggcggtc gggctgtggc cagcggtgac acggaccagc
     4501 tgcaggccat cgcgcccggt cagcctttcc gtctccagca gacgcgcagt gctgccgatg
     4561 tggtcatcat gaaggagatt gtgcgtcaga cgccggaact gcgggaggcg gtatacagcc
     4621 tgattaaccg ggatgtggaa agggcgctgt ccgggcttga gcgtgtgaaa ccgtctcagg
     4681 tgccacgtct ggagggcgca tgggcaccgg agcactccgt gacggagttc agtcacagcc
     4741 aggaagcgaa actggcagaa gcgcagcaga aggcgatgct gaaaggcgag gcttttccgg
     4801 atgtccccat gacactgtat gcagccattg tccgcgacta taccggcagg acaccggaag
     4861 cacgggagca gacgctgatt gtcacgcacc tgaatgagga ccggcgcgta ctgaacagca
     4921 tgattcatga tgcacgggaa aaggccggag aactggggca ggtgcaggtc atggtgcctg
     4981 tcctgaacac agcgaatata cgcgacgggg agctgcgtcg tctctccacc tgggagaata
     5041 acccggatgc ccttgccctg gtggataatg tgtatcaccg gattgccggt atcagcaagg
     5101 atgacgggct gataaccctg caggatgcgg aaggtaacac gcggctgatt tcgccccggg
     5161 aggcggtggc tgaaggcgtc acgctgtaca ccccggacac catccgggtg gggaccggtg
     5221 acaggatacg cttcacgaag agtgaccggg agcgcggtta tgtggccaac agcgtctgga
     5281 cggtgacagc ggtttccggt gacagtgtca cactttctga cggtcagcag acccgtgtga
     5341 ttcgccccgg tcaggagcgg gcagagcaac atattgacct ggcctatgcc atcaccgccc
     5401 acggtgcaca gggggcgagt gaaacctttg ccatcgcgct tgaaggcacg gaaggtaacc
     5461 ggaaactgat ggccggcttt gagtcagcct acgtggccct gtcgcgtatg aagcagcatg
     5521 tgcaggtgta caccgataac cgtcagggct ggacggatgc catcaacaat gccgtacaga
     5581 aaggaactgc ccacgatgtg tttgagccga aaccggaccg ggaggtcatg aatgcagagc
     5641 ggctgttcag tacggcgcgg gagctgcggg acgtggcggc aggccgtgcc gttctccgtc
     5701 aggcggggct ggccggggga gacagtcctg cacggtttat tgctccggga cgtaaatatc
     5761 cgcaaccgta tgtggcactg ccggcgtttg accgtaacgg caagtccgcc ggtatctggc
     5821 tgaacccgct gaccacggat gacggaaacg ggctgcgggg attcagcggt gaaggtcggg
     5881 taaaaggcag cggggatgcg cagttcgtgg ctctgcaggg cagccgtaac ggagaaagcc
     5941 tgctggctga taatatgcag gatggcgtcc ggattgcccg tgataatcct gacagtggtg
     6001 tggtggtaag aatcgccggt gaaggccgtc cgtggaatcc cggtgccatc accggtggcc
     6061 gcgtgtgggg ggatatcccg gacaacagcg tccagccggg agccggaaat ggcgaaccgg
     6121 tcacggcaga ggtactggca cagcggcagg ctgaagaggc catccgccgt gaaacggaac
     6181 gtcgcgcaga tgaaattgtc cgtaaaatgg cagagaacaa acctgacctg ccggacggca
     6241 aaacagagca ggctgtcagg gaaattgccg ggcaggagcg tgaccgggct gccataactg
     6301 aacgggaagc cgcgctgccg gagagtgtac tgcgtgaacc acaacgggtg cgggaagcgg
     6361 tccgggaagt tgcccgggaa aatttgctgc aggagcgtct gcagcagatg gagcgggata
     6421 tggttcgtga cctgcagaaa gagaaaaccc cgggcggaga ctgatacagg aagacaaaca
     6481 ctgatgacaa cggataacac gaacacgaca cgtaacgatt cactggctgc acggaccgat
     6541 acctggttgc agtcatttct ggtctggtca cccggacagc gggatatcat caaaacggtg
     6601 gcactggtgc tgatggtact ggaccacatc aatctgatat tccagctgaa gcaggaatgg
     6661 atgtttctgg ccgggcgagg agcctttccg ctttttgccc tggtgtgggg gctgaatctg
     6721 tcccgtcatg cgcatatccg gcaaccggcc attaaccggc tgtggggatg gggaattatt
     6781 gcccagttcg catattatct ggcaggcttt ccctggtatg aggggaatat cctgtttgcc
     6841 tttgcagtgg cggcacaggt gctgacgtgg tgtgaaacgc gcagtgggtg gcgtacagca
     6901 gcggccatac tcctgatggc cctgtggggg cctttgtccg gcaccagtta cggtattgcc
     6961 gggttgctga tgctggcagt cagcaaccgg ctgtaccggg cggaagacag agcggaacgt
     7021 ctggcgctgg tcgcctgcct gctggctgtt attccggcgc ttaaccttgc caccagtgat
     7081 gcagcggcgg tggccggtct tgtgatgacg gtgctgaccg ttggtctggt gttgtgtgcc
     7141 ggaaaatcat taccccgttt ctggcccgga gactttttcc cgacgttcta tgcctgtcat
     7201 ctggctgtgc tgggcgttct ggcgctgtga cgggtgtggt atctttggcc gcaagaggat
     7261 gattcgtcag aggcagaaca cagcatgaca gagcagaagc gaccggtact gacactgaag
     7321 cggaagacag agggaacagc gactgtccgc agccggaaaa ccatcatcaa tgtcaccacg
     7381 ccaccaaagt ggaaggtgaa aaagcagaag ctggccgaga aagcggcccg tgaagcagag
     7441 ctggcggcaa aaaaagcgca ggccagacag gcgctgtcca tttatctgaa cctgcccacg
     7501 ctggatgagg ctgtgaatac cctgaagccc tggtggccgg gattatttga cggtgacacg
     7561 ccccggcttc tggcctgcgg tatccgggac gtgttactgg aagacgtggc gcagcggaat
     7621 atcccgctct cgcataaaaa actgcgcagg gcgctgaagg ccatcacccg ttcagaaagc
     7681 tatctgtgtg ccatgaaagc cggtgcctgc cggtatgaca cggaagggta tgtgacggag
     7741 catatttctc aggaggagga agcgtatgcg ggagcgcgtc tggcgaaaat tcgtcgccag
     7801 aaccggataa aggcagaact tcaggccgtg cttgatgaga aataaaaaaa gcctccccca
     7861 gagagaggag gcagggaaat aaggcttaaa aggaaataac ttccgcttcc gaaaggaagc
     7921 cagtccactg aattatttat cacaataata ctgacaacta aagggggaca agaaaatgaa
     7981 tggattcaga aacagttcac ggaacggcca ggtctggcgt taccagcgtg ccggcgggcg
     8041 ggccgttatt ctggaagtca gtggacgctg gatggaagcg gcagaagcat ggcgacgggc
     8101 tgcctgtgtt gcgcctagga cagactggca gcagtttgcc cggaaaaggg ctgaacactg
     8161 ccaccggcgc tgccggggaa gggggtaacg aaaaaagcag ccttcattac tccaggagtc
     8221 agaaggctga aaggagttta tgagatttgc ttcttaatat ccggtcgggc agtatgaccg
     8281 gacagttctg agtagcacag agtcttttcc gcattaagtc gattttttat attttgtgat
     8341 taatttcaca aaataaggtg ttattcaatg tgtgctgcac tattcagggg ggctgaaata
     8401 caggtgccat ttatctgata tggagaataa catgaggaaa tatattccac tggtattatt
     8461 tatcttttca tggccggtat tgtctgcaga tattcatgga cgggttgttc gtgtactgga
     8521 cggtgatacc atcgaggtca tggactcact gaaggcggtg cggatcaggc tggtaaatat
     8581 tgatgcaccg gaaaagaaac aggattatgg ccggtggtca acagacatga tgaaatcact
     8641 ggttgcagga aaaacggtta ccgtcacata ttttcagcga gatcgttatg gtcgtattct
     8701 cgggcaggtt tatgcaccag acggaatgaa tattaatcag tttatggtcc gggccggggc
     8761 tgcctgggta tatgagcagt acaacacaga tcccgtgcta cctgtccttc agaacgaagc
     8821 cagacaacaa aaacgtgggc tctggtcaga tgctgatccg gttcccccct ggatatggag
     8881 gcaccgtaaa taaagcgatg gcaatcctat cattcatctg ttctcagcgg gaataaaaat
     8941 ggcaaaaaca aaacaggaat ggctgtatca gttacggcga tgttcatcag tcaatacgct
     9001 ggaaaaaatt attcataaaa acagagacag tttatcaaac agtgaacgtg aatcatttaa
     9061 ttcagcagca gaccaccggc tagcggaatt aatcaccgga aagttatatg acaggatacc
     9121 aaaagagata tggaaatatg taaggtaata attcagcaat aattaattgc caggagcaga
     9181 taaataatga agttgattat ttttattctc attgttctga ttattgcagc gctacttatc
     9241 cggattatcc tcagaagtgt aaatcagcat tctcctttgc tgatgcaatt gcatgcggca
     9301 ggtatacgga ccggtgatgc agagcgaata ctgtccagcg gtgaatactg gcaacgtcag
     9361 acgacgctgc tgacagaaag ggaagtcagt tttatgaaag gactgttcag aattgtggat
     9421 atgacgcggt ggtatctgtg tccgcaggta cgggtcgcgg atatcgtcca gctgaacggg
     9481 aatatccggc cacgatcacg ccagtggtgg cagttattca ggatggtgtc tcagtggcat
     9541 gttgatgtgg ttatcgttga gctgcgttcg ttcagtattg ttgcagcagt agagctggat
     9601 gatgccagcc atttacgacc ggaacgcaga cgccgggata ttcttctgga agaggttctg
     9661 aggcaggctg gtattccgtt gctcagaagc cacgatgcca gaaaactgct gcagatgacc
     9721 ggagaatggc tgaatacaac aggggctgat cagcagtcac cggaacatcg tagctgacgc
     9781 cttcacgttg ctcagttgtc caaccccgga aacgggaaaa agcaagtttt cctcgctccc
     9841 ggcgtttcca taactgaaaa ccatactatt tcacagttta aatcacatta aacgacagta
     9901 atccccgttg atttgtgcgc caacacagat cttcgccaca attctcaagt cgctgatttc
     9961 aaaaaactgt agtatcctct gcgaaacgat ccctgtttga gtattgagga ggcgagatgt
    10021 cgcagacaga aaatgcagtg acttcctcat tgagtcaaaa gcggtttgtg cgcagaggta
    10081 agcctatgac tgactctgag aaacaaatgg ccgctgttgc aagaaaacgt cttacacaca
    10141 aagagataaa agtttttgtc aaaaatcctc tgaaagatct catggttgag tactgcgaga
    10201 gagaggggat aacacaggct cagttcgttg agaaaatcat caaagatgaa ctgcagagac
    10261 tggatatact aaagtaaaga ctttactttg tggcgtagca tgctagatta ctgatcgttt
    10321 aaggaatttt atggctggcc acgccataag gtggcaggga actggttctg atgtagatgt
    10381 acaggagcca gaaaagcaaa aaccccgata atcttcttta actttggcga gtcagaaaga
    10441 ttaccggggc ccacttaaac cgtatagcca acaatcaagc tatgcgggga gtatagttat
    10501 atgcccggaa aagttcaaga cttctttctg tgctcgctcc ttctgcgcat tgtaagtgca
    10561 ggatggtgtg actgatcttc aacaaactta ttaccgccag gtaaagaacc cgaatccggt
    10621 gttcacaccc cgtgaaggtg cccggacgct tccgttctgc gggaaactga tggaaaaggc
    10681 ggtgggcttc acctcccgtt ttgatttcgc cattcatgtg gcacatgccc gttcgcttgg
    10741 tctgcgtcgg cgcatgccac cggtactacg tcgccgggcc attgatgcgc tgctgcaggg
    10801 gctgtgtttt cactatgacc cactggccaa ccgcgtccag tgttccatca ccacgctggc
    10861 cattgagtgc ggactggcga cggagtctgc tgccggaaaa ctctccatca cccgggccac
    10921 ccgggccctg acgttccttg cagagctggg actgattacc taccagacgg aatatgaccc
    10981 gcttatcggg tgctacattc cgaccgatat cacgttcaca tctgcactgt ttgctgccct
    11041 cgatgtatca gaggaggcag tggccgccgc gcgccgcagt cgtgtggaat gggaaaacag
    11101 acagcgcaaa aagcaggggc tggataccct gggtatggat gaactgatgg cgaaagcctg
    11161 gcgttttgtt cgtgagcgtt tccgcagtta ccagacagag cttaagtccc gtggaatgaa
    11221 gcgtgcccgt gcgcgtcgtg atgcggacag gcagcgtcag gatattgtca ccctggtgaa
    11281 acggcaactg acgcgtgaaa tctcggaagg gcgcttcact gccagtcgtg aggcggtaaa
    11341 acgtgaagtg gagcgtcgtg tgaaggagcg catgattctg tcacgtaacc gtaattacag
    11401 ccggctggcc acagcttccc cctgaaagtg acctcctcag aataatccgg cacgcgccgg
    11461 aggcattcgc acgcctgaag cccgccagtg cacaaaaaat cagcgctaca tacaaaaaac
    11521 aacctcatca tccaccttct ggtgcatccg gtcccccctg tttttgatac aaaacacgcc
    11581 tcacagacgg ggaattttgc ttatccacat taaactgcaa gggacttcac cataaggtta
    11641 caaccgttca cgtcataaag cgccagccgt cagccctaca gggtgcaatg tatcttttaa
    11701 acacctgttt atatctcctt taaactactt aattacattc atttaaaaag aaaacctgtt
    11761 cactgcctgt ctgtggacag acagatatgc acctcccacc acaagcggcg ggccccgacc
    11821 gaagccggtt tagttacaac atgcaaacat aaacccctaa aaaacccaag tccgacgcag
    11881 aactgaaacc acaaagcccc tccctcataa ctgaaaagcg gccccgcccc ggcccgaagg
    11941 gccggaacag agtcgctttt aattatgaat gttgtaacta tattatcatc gctgtcagtc
    12001 ctctggctgg acgtatcgag tacacgctcg taagcggccc tcacggccct cacggcccgc
    12061 taacgcggag atacgccccg actgcgggta aacccttgtc gggctccgac cgcgcacaga
    12121 agctctgtca tagctgaaaa cgggtatggc ttggcagcta ccatgttctg tcaagaaaaa
    12181 tcgcttgaac tccgacgtac agccccctaa gtactgccag caagctgtca gcactaagtc
    12241 cccgatacag cgcggcatag ccgcgctaac ggggttaaaa gggcttacct atacttcatc
    12301 atcgctgaaa gcccgcatgg cctcgcaggg cagagatggg ataggtgaaa cctatcaata
    12361 cgtaccggct tacgccgggc ttcggcggtg ttactcctgt accatatgta actacatcat
    12421 gccgccttac atgcgctacg cgcatatgaa gacaaatagc ccacatcaaa cggtttttag
    12481 gtcttcagta cgccatagca ccagtgcacg agttttctca tcagcgcacc aatggcacac
    12541 attttggcct tacctctcag gcataatcgc tcatacatcg ctttcatcaa tgggttaaat
    12601 ctcagaccac acaacgaagc cagatacagt ttcgcccgga tttccggcgg accaattttt
    12661 gacagtttcg gacaccctct gaccgaggtg ccggaatatt tttcaacggg aacgacacct
    12721 aaaaatgcag ccgcctgt
//
LOCUS       DAJVUK010000128        12612 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.128, whole genome shotgun sequence.
ACCESSION   DAJVUK010000128 DAJVUK010000000
VERSION     DAJVUK010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12612
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.128"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..100
                     /locus_tag="OQQ57_003208"
     CDS             <1..100
                     /locus_tag="OQQ57_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1957876.1"
                     /translation="LARLGRKSLSFSKSVALHDKVIGHYLNIKHYQ"
     gene            complement(120..185)
                     /locus_tag="OQQ57_003209"
                     /pseudo
     CDS             complement(120..185)
                     /locus_tag="OQQ57_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280980.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease"
     gene            418..522
                     /locus_tag="OQQ57_003210"
                     /pseudo
     CDS             418..522
                     /locus_tag="OQQ57_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            862..1119
                     /locus_tag="OQQ57_003211"
     CDS             862..1119
                     /locus_tag="OQQ57_003211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm development YmgB/AriR family protein"
                     /protein_id="HCS1957877.1"
                     /translation="MHSDYYNMVFGEKLANILYEANSQFFYERNVIEEAVNALFCERE
                     IINNKNIIKKLMFFLSDVNHTKKDVVQSALNIIIDITSGDI"
     gene            complement(1457..1588)
                     /locus_tag="OQQ57_003212"
                     /pseudo
     CDS             complement(1457..1588)
                     /locus_tag="OQQ57_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            1870..3228
                     /locus_tag="OQQ57_003213"
     CDS             1870..3228
                     /locus_tag="OQQ57_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000823236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HCS1957878.1"
                     /translation="MKRKIIPVLIGCTLSFSALAAQPTAERYVVSFPEGTHVNYAGAF
                     ASAFPNGLPVGIGSGLLFTGKQGDALTFATITDRGPNADSPKEGKNETKIFVTPDFAP
                     LLMTIRVQNGKAEAIDPRPLHDDKGAINGLPLASDVIGSTNEVAFSDTLHRLKGDNHG
                     LDTEGITPDGKGGYWLCDEYGPFLINIDSKGKILAIHGPQAAEGEKAIAGGLPNILKW
                     RQANRGFEGLTRMPDGRIIVAVQSTLDIDAKSKKKALFTRLVSFDPASGKTAMYGYPI
                     DSAAYSKNSDAKIGDIVALDNQHILLIEQGRDKNNRMRNLIYEVDLNKASDLSGFDKP
                     GEYPEFDDEKTLSQRGITLAQKTQVVDLRSLGWQQEKAEGLALIDSKTLAVANDNDFG
                     VKVAMQHPVEGKTFKDYRVNAEGKLTLDDKQVETTLRVKPLEKPESDSELWIVTLPEA
                     LK"
     gene            complement(3467..4852)
                     /locus_tag="OQQ57_003214"
                     /pseudo
     CDS             complement(3467..4852)
                     /locus_tag="OQQ57_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(4902..5249)
                     /gene="tnpB"
                     /locus_tag="OQQ57_003215"
     CDS             complement(4902..5249)
                     /gene="tnpB"
                     /locus_tag="OQQ57_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1957879.1"
                     /translation="MIPLPSGTKIWLVAGITDMRNGFNGLAAKAQTALKDDPMSGHVF
                     IFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDW
                     RQPKRLLTSLTML"
     gene            complement(5246..5626)
                     /locus_tag="OQQ57_003216"
     CDS             complement(5246..5626)
                     /locus_tag="OQQ57_003216"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HCS1957880.1"
                     /translation="MQKNVTPGRRKGCPNYPPEFKQQLVAATCEPGISISKLALENGI
                     NANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFR
                     HGTLRFNGNVSEKLLTLLIQELKR"
     gene            complement(5981..6415)
                     /locus_tag="OQQ57_003217"
     CDS             complement(5981..6415)
                     /locus_tag="OQQ57_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HCS1957881.1"
                     /translation="MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQR
                     GNDGQPPWFEHDQMTVAEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVM
                     CDENYEGEKCCPRCGTGVYSRAWGRQEVPSEDARADNPLQRL"
     gene            complement(6403..6804)
                     /locus_tag="OQQ57_003218"
     CDS             complement(6403..6804)
                     /locus_tag="OQQ57_003218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004020115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957882.1"
                     /translation="MYAKSFIALDGNGRLTGARTAQAAPYANYTCHLCGSALRYHPQY
                     DTELPWFEHTDDRLTEHGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASWHCRQC
                     HHDYYGEQYCTHCQTGGFSIPRTTQEEICEF"
     gene            complement(7064..7633)
                     /locus_tag="OQQ57_003219"
     CDS             complement(7064..7633)
                     /locus_tag="OQQ57_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000221568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HCS1957883.1"
                     /translation="MTYKYNPFWQQRIRETVRHALDVHPRLTALRVDLRLPDVPAATD
                     AAVISRFINALKARIDAYQKRKHREGKRVHPTTLHYVWAREFGECKGKKHYHLMLLVN
                     RDTWCRAGDYRAPESLAGMIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQ
                     QVLERADYLAKEHTKAHCTGERNFGCSRS"
     gene            complement(8306..8515)
                     /gene="hha"
                     /locus_tag="OQQ57_003220"
     CDS             complement(8306..8515)
                     /gene="hha"
                     /locus_tag="OQQ57_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000453335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HCS1957884.1"
                     /translation="MEVKTKEDWLYQFRRCSSRETLEKVISHTRYKLTPAELAFNSAV
                     DHRLAELTMNKLYDRVPASVWKYVT"
     gene            9214..9420
                     /locus_tag="OQQ57_003221"
     CDS             9214..9420
                     /locus_tag="OQQ57_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HCS1957885.1"
                     /translation="MNTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGAFPAPIKL
                     GRSSRWLKSEVEAWLQARIAQSRP"
     gene            9506..10078
                     /locus_tag="OQQ57_003222"
     CDS             9506..10078
                     /locus_tag="OQQ57_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957886.1"
                     /translation="MQKLENRCDLLLTQHQKWMASVTRFIVAHGMGSPHLHGYHRLTL
                     AHFFLPEKGTIISVAPQGLYQVVNPATPPFIPAIQEGLMTSIQTHEIMLLTHFNLGGV
                     LLSELHRLGESRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCAHSMQPWTEELKHKS
                     HAELESWAVARKREKRELELMIDEYLLYAC"
     gene            10287..10394
                     /locus_tag="OQQ57_003223"
                     /pseudo
     CDS             10287..10394
                     /locus_tag="OQQ57_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            11571..12590
                     /locus_tag="OQQ57_003224"
     CDS             11571..12590
                     /locus_tag="OQQ57_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1957887.1"
                     /translation="MNNEQMLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIR
                     NVNSFLKEKYYKASNNSFGVFGSTAEEALSKEINELEIIAGQAILPEESFLWLKTDEL
                     ATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP
                     SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMC
                     QWFWTRLKQKQDEKHPVHNPVTRWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRI
                     NHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRTGEFFEMLITEKYLE
                     HKRRK"
BASE COUNT         3397 a         3121 c         2917 g         3177 t
ORIGIN      
        1 tctggcaagg ctgggacgga agtcactgtc gttctcaaaa tcggtggcgc tgcatgacaa
       61 ggtcatcggg cattatctga acataaaaca ctatcagtaa gttggagtca ttacctcctc
      121 ccgaactcaa agctatcata cagataatta ctggttaacc ctatataggg cattttaaag
      181 tgttgtgatc ttacccagca atagtggaca cgcggctaag tgagtaaact ctcagtcaga
      241 ggtgactcac aagacaaaac agtttcaacc agtaaaaaaa cgtaaacacc attcgcatga
      301 atttcgtagt taagatctga agcttgcaga atgcatcggt gttactgccg gagtccgtga
      361 acttagtctg catgaatcac cacagcttta catctgtcgc agtaaacagc aaaatcagca
      421 aacttactta attatatcga gtgcgattac aatcgctggc gatggtacag ttggtgtggc
      481 ggtctcagtc cggaacaatt tgaaaatcag aatctcactt aaaacggcat ccattttaca
      541 aaagatggcc gtctgtgtat ttgtaatgaa taccttctac atgtttagag tgcataatcc
      601 acgacaaggc gatatcctaa aaattagcta gcaggcaact ttgatggcat agataatgtt
      661 tttagtaaaa aagagttgac tgaatataat acagcctctt cctacataag aaggaatgtg
      721 ctcacaaaaa aaaaccatta gtctgcttcc tgttcttaca ataatcagta ttatgtattt
      781 tatttatata gcaaaatatg cttattacac ctgtcataat taggcatggt aaaattattg
      841 actgaaccct gggggagaaa gatgcacagt gattattata atatggtttt tggtgaaaaa
      901 ttggccaata ttttatatga agctaactct caattttttt acgagagaaa tgtcatagaa
      961 gaggcagtca acgctttatt ctgtgagcgt gaaataataa acaacaagaa cataataaag
     1021 aagctgatgt tctttttgtc agatgttaat cacaccaaga aagatgttgt tcagagcgca
     1081 cttaatatta tcattgacat tacatcaggt gatatttgag attttacata aaagataatc
     1141 tctcaaggag tcttatctga aaacgaaata tatagtccct ctcgttttgt aatatcgatt
     1201 ggctttgttg aatcggttac gtaccccgga gctggtcata ttttcaggta atacacacgc
     1261 tttcagacat ttcggctttc gtcattttgg tatcatgggc atagcttctg ctacctgagc
     1321 atcataatca cgcagcttca gtgaagcagt gaccacctgt ttaacccggt gtatcgttat
     1381 gatcttatcc agcaataatg gacacgcggc taagtgaacc gccccgggtt tcctggagag
     1441 tgttttatct gtgaactcag gctgccagat catcgtttcc gatggaagca taataagctt
     1501 tttctgcttc tgccggtggg atatggccct gcctttccag caatcgtcga ttgttatacc
     1561 agtccaccca cgtgagtgtg gtcagctcat catactgaca cgtgcattac ccctaccgcg
     1621 ataatgcaac cgtacaatat agggcgtttc ctaaacgcag ccctcatcac tccaatccaa
     1681 caagacacag catttttgat cacgaagaaa gacaaataat ttccgtaaat gtttccgttg
     1741 ttacaaataa caacagtgtt ttacatttct ttggcctcag gcccgcgcat gttgccattc
     1801 gatgttattt tcctgactcg tttcttcttt atggtgtagt gtgatcttca ctttatggat
     1861 gctaacaata tgaaaagaaa aattattccc gtgctaatcg gttgtacgct ctctttctct
     1921 gccctggcgg cacaacctac ggctgagcgc tatgtcgtca gttttccaga aggcacgcac
     1981 gtgaactacg ccggcgcatt tgccagtgca ttcccgaacg gccttccggt tgggataggt
     2041 tctggcctgc tgttcaccgg taaacagggc gatgccctga cattcgcaac cattaccgat
     2101 cgcggtccga acgcggattc accgaaagag gggaaaaacg aaactaaaat tttcgttacg
     2161 ccagatttcg cgccgctgct gatgacgatt cgtgtacaaa acggcaaagc ggaggccatc
     2221 gatccccgtc ctctgcatga cgataaaggt gcgatcaacg gtctgccgct ggcaagcgac
     2281 gtgattggct ccaccaatga agtggccttc agcgacacgt tacatagact gaagggggat
     2341 aatcacgggc tggatacgga agggatcact ccggatggta aaggaggtta ctggctgtgc
     2401 gatgagtatg gcccgttcct gattaacatc gacagtaaag ggaaaatcct ggcaatccac
     2461 ggtccgcagg cggcggaagg ggaaaaagcg attgcgggcg gtttgccaaa tatcctcaaa
     2521 tggcgtcagg cgaaccgcgg ctttgaaggc ctcacccgta tgccggacgg gcgtattatt
     2581 gtcgccgtgc aaagtacgct ggatatcgac gctaagagca agaaaaaggc gctgtttacg
     2641 cgtctggtga gcttcgatcc ggcaagcgga aaaaccgcga tgtacggtta tcctatcgac
     2701 agcgcggcct acagcaaaaa cagcgacgct aaaatcggag acatcgtggc gctcgataac
     2761 cagcacatcc tgctgatcga acagggaaga gataaaaaca acagaatgcg taacctgatt
     2821 tacgaggtcg atctcaataa ggcgagcgac ctgtcaggct tcgacaagcc gggtgagtat
     2881 ccggagtttg atgatgagaa aaccctgtca cagcgcggca ttacccttgc gcagaaaacg
     2941 caggttgttg atctgcgctc cttgggctgg cagcaggaga aggctgaagg gttggcgctg
     3001 atcgacagca aaacgctggc ggtggcgaac gataacgact ttggcgtgaa ggtggcgatg
     3061 caacatccgg tcgagggcaa gacattcaag gattatcggg tgaacgcgga aggaaagctg
     3121 acgcttgacg acaagcaggt tgaaacgacc ctcagagtga agccactgga gaaaccggag
     3181 tctgacagtg aactgtggat tgtgacgctg ccggaagcgt tgaaataagt ttataaggta
     3241 cggacagcag tatcgcttag tttttcaaat tcatgtatgt gaacaatatt ggggttccgg
     3301 cgtagaccct caatgaaagc gtcaccacgt gaaaacatgc ctgcacggtt tacacgtcat
     3361 cccatggtgg cagccggtta actttcctgc tacaccagtg gaaaaaggcc ataagcagtc
     3421 cgaacaaaag taagcgtaca gcgagggccg tattgacggg gatgtgttat tcagctggca
     3481 gtgctatgcg ccacggaagc agttcgctga cccggttgac cggccagtct gctatgacgc
     3541 caagcacatg gcgaaggtag ctttctggat ccacgtcatt cagtttgcac gtcccgatca
     3601 ggctgtacag tagcgctccc cgctcaccac catggccaga gccgaagaac agggtcttca
     3661 tcttttcacg caaccagctt tccagggatt tcaacagcgg tttcgttttt cgctgacgtt
     3721 cagcaagccg ctgctctgcc ggcattcccc ttatatccgc ctctatggcg tacaactgac
     3781 cgatctgctc cagggcttct tccgtcagtg ctgacgggat gcggacgtgc acatcgtgga
     3841 tctttcagcg ggcatgagcc cagcaggcag cttccgttat cccaccattg cgatacagct
     3901 cgttgaaccc ggcgtacgca tccgcttgca gcacaccgct gaagcaagca agatgagtct
     3961 gcggatggat gccttttctg tccgggctgt aagcgaacct cactgcaggt gccaacgctg
     4021 acccggcatt gcggtcatca cgaacatacg cccacaaccg cccggtcttc gtcttcttat
     4081 tacccggcag cagtacctgg accggggtat catcggcatg gagtttgccg tcagtcatga
     4141 catagccatg aagcgcctct tccagcggag acagcagccg gcagcatgca tccacccagc
     4201 ccgacagcag tgaacggctc agctccacac cttgccggcc gtatatttct gactggcgat
     4261 acagcggggt gtgctctgca tacttcgagg tcagcacgcg ggccagcagc cccggtccgg
     4321 cgataccccg ctcgatgggc cgcgaaggtg caggtgcctg cacgatggta tcgcactgag
     4381 tacaggcatg tttttcctgt accgtccgga taacccggaa ggcgctacgc atcaactcca
     4441 gctgttcggc ggtatcctcg cccagatagc tcagtgaacc gccgcagttc gggcagcacg
     4501 gcgccgcagg caacagtcgc ttttcgtcac ggggtagtga ttcagggaac ggcttacggg
     4561 tgcgggtctg acgcaacgga cgctgtactg ccgggtcata caccctacca gtcagcgtat
     4621 cgctctcttt ctgaagtcgg ttcagatcgg cttccatttg tgcgatacgg cgggagactt
     4681 tttcggaacg actgccgaag ttcatccggc ggagtttatc cagctgcgcc tgcagatggt
     4741 ctatttcgcg ctcccggttg ctcagctttt cctgcagggc gtggatcagc gcttcctgtt
     4801 cggccaggcg ctgtttcagc aggaagatgt cgtcagaaga gatgtcgttc ataagcccgt
     4861 attttaccgg gcttattctg tgacaaccag gataaagaga tttacagcat ggtcagggag
     4921 gtcagcagcc gcttaggctg tcgccagtcg ataccttcca gcagcatcgc cagctgcgcc
     4981 tgcgtaagga acactttgcc atcacgggct gacggccagg cgaagcgccc acgctccagc
     5041 cgtttggtca ggaggcacag tccgtcaccg gtggaccaca gcagtttaac ctgactgccg
     5101 ctgcggcccc ggaaaatgaa aacatggccg gacatgggat cgtctttcag cgccgtttgt
     5161 gctttcgcag ccaggccgtt gaagccattt ctcatatcgg tgataccggc aaccagccaa
     5221 attttggtcc cggaaggtaa cgggatcatc gcttcagttc ctgtatcagt agagtcagga
     5281 gcttttcgct gacattgcca ttgaagcgga gcgtcccgtg ccggaacgtt acctcacagc
     5341 tgatactgag ggtttccggg tcctctgcga gcgattctgg ctgttcggca gcggcatcga
     5401 gagtcacagg aagtagctgg gggctctctg aagaaggtaa tagcagcttt ccctcgcgcc
     5461 attgttgtcg ccatttgaac aacagattgg cgttaatgcc attttcaaga gcaagttttg
     5521 agatggatat cccgggttca caggtggcag caacgagctg ctgtttaaat tcgggaggat
     5581 aattagggca gccttttcgc ctgccgggag tcacattttt ctgcatatct gatactttgg
     5641 ttcccactac ttatttggtg gacaccactt tgtctaattc gtcagattct gaccagacgg
     5701 ttcaggctgt acgcttacca ctattttatc cctgttgaat ttggttaagc cggtgcagac
     5761 gcgccgggaa acgcacacct gaaccggcac aataaaatac aatacaaccc cctgttactg
     5821 gagatacgaa tggaatgacg aggcagcctg tcagtcacag ggggctgttg gcataaaatc
     5881 aacggaaagg ccaccaacac cggaattaag ctccacagtc cccgcactgg caatccattc
     5941 ccgggaaagg catcaccgca aactgctccg gaggcaacca ttacagcctc tgtaacggat
     6001 tatcagccct ggcatcttcc gacggcacct cctgccgccc ccacgccctg ctgtataccc
     6061 cggtaccgca gcgtgggcag cacttttccc cctcataatt ttcgtcacac atcacacaaa
     6121 accactttct caccttcacc gtataatccg gaaccgtcat gccctgcaga tgcaaacgac
     6181 gggcctcttt ctctgccggg tcaagccagg tacatcgcag caggattttt tcagcgacag
     6241 tcatctggtc atgttcaaac cacggtggtt gtccgtcatt gccccgctga agtgttaacg
     6301 ggcatccaca ggacacacag cacaaaacgt cctgtcggtt gtgcttcgca gcttctttcg
     6361 ccgtaacaaa atggcctttg ctgtcattcg ccatataaca gttcagaatt cgcatatttc
     6421 ctcctgagtt gtccggggaa tactgaatcc tccggtctgg cagtgtgtgc agtactgctc
     6481 cccataataa tcgtggtgac attgtctgca gtgccagctg gctttacgca ccacgggtaa
     6541 ggcatccggt acgaattgct gcagacgttt aatcaactgt atttctctgc gctccggcct
     6601 gacataaggg cactgttgac cgtgctctgt cagcctgtcg tcagtgtgtt caaaccaggg
     6661 aagttcagtg tcgtattgcg gatggtatct gagtgcactg ccacacaagt ggcaggtgta
     6721 gttagcataa ggtgcggcct gtgcagtacg ggcgcccgtc agacgtccgt tgccatcaag
     6781 agcgataaag gattttgcgt acatagtcat atacctcagc cgccagacga cacgcaggca
     6841 acagccgtcc cggtacgggc agcgtggtca gggtgtgaat ggcggttcag ttaaaatctg
     6901 gactggagtt tgggtaaagc aggctggttg ctgttacagc actgtggttg tcacacaatg
     6961 gaacactgac gtaaaaaaca gtcagtgggc gagtggatac atcgttgccg ccagacaaca
     7021 acccatactt ttggtttgcc ggatattggc gcgccagtcg tgctcaactc cggctacagc
     7081 caaaattgcg ctcaccggtg cagtgagctt tggtatgctc cttcgccaga tagtcagcac
     7141 gttccagcac ttgctgaaag ccggtgtcat cattacgcgc cagccacacc gccggccagg
     7201 ccggaaaatg caccagcgtg gcatggcacc cgacatccac tcccagggca ctgcaccacg
     7261 cctgtttaat catcccggcg agagactccg gagcgcggta atcaccggca cgacaccagg
     7321 tatcccggtt gaccagcagc atcaggtgat agtgtttttt acctttgcac tccccaaact
     7381 cccgggccca gacgtaatgc agggttgtgg gatgcacgcg tttaccttcc cgatgcttac
     7441 gtttctggta agcgtcgatt cgggctttca gggcattgat gaagcgggat atcacagctg
     7501 cgtccgttgc tgccggcaca tccgggagac gcagatcaac ccgaagtgcc gtcaggcggg
     7561 gatgaacatc cagtgcgtgc cgcaccgtct cacgaatacg ttgctgccag aaggggttgt
     7621 atttgtaggt catggttaaa tctccgtatg gttcatacgg aatagccacg tcgtaaaaaa
     7681 tacgcagagt ccctgaagtg acctccggca ggacactgtc tcaggcactc tgtgataacc
     7741 cgaacggtcg tctccggact gacggttgaa ttttcagcgt tgttttttaa tgtaaaaaac
     7801 cggttacggg taaggctgtg aggagggagt gatggtgata cgcaaaaaga agtgcaggga
     7861 ctgtggaaac gcgattactc ataatacagt gtgttgcccg tattgtggtc ctgctgacta
     7921 ctgtcagcgt cagtgtgtgt atactgtgta gctggtgaga taacggttca tgtatcccct
     7981 gagctgacaa tgtaccgtgt atattaagcg taaccgacag gttctccttc ataccatatt
     8041 aaattttcca ggtattgccg ctgccttatt tcgtcccata caggaaaact catctgggtt
     8101 tctgacaaat acgcgaaact cacagcccct caatatcaac cacacgttgt aagccggtaa
     8161 tacctgaaaa tcagcctatt accgcccacg cctccggcac cattcccttt tgatttcgaa
     8221 ttctttgttg ccgttatact gcttaatgtt cccgatcttc cggtgcacag ataacaccgg
     8281 agtcatcgta gcgcggattc aagattcagg tgacatattt ccagacggaa gccggcacgc
     8341 gatcgtaaag tttgttcatt gtcagttctg ccagccggtg atcgaccgca gagttaaagg
     8401 ccagttccgc aggggtaagt ttataacgtg tgtgggaaat cactttttcc agcgtctccc
     8461 gggatgaaca acgacggaac tgatacagcc agtcttcttt ggttttaact tccattagcc
     8521 tctcatcact ttatgctgca attaacgtga tactgccagc ataccgcacc tgactggcat
     8581 tctggtaccc accccaaact cattactccc gcaccaccac ttaaccggtc tctcagactg
     8641 tcactcacca ggtcggatac gtttaccgct cagacggatg cttaatgcac tctgttcacg
     8701 tgtgttgcag gtacgtttta tatacgcagg ttatacgcca gctatcaggg atagccctgt
     8761 gagtacaacg taatctgttg ctactgcgtt ctcataccca ctgatcacac tcacagtgtt
     8821 tatttcacag atatgaactc atgtgtttga tctctcttat atatttataa taccaatcag
     8881 acagtcttat cccatcggtg atacctgtct ctgcccacaa ggcacgagct gccccaccgt
     8941 aaccgccccg taaataactc tgcaattata agaacgacgg ttcttcccct catcctcccg
     9001 aaaatcatcc cttctctgtc gtgcgtacgc gcgagaaaca tcgtttcgcg gtagccaccg
     9061 ggtatcccag catcatgctc cctgtttatc tcccgacagg aatattcccc tgctcatttt
     9121 ttacgtttct ccccggttgt tatgccagtg aaggtggtgc gtttttcatc accaacgccg
     9181 gttgagatta acaacatccg gaggaacatt ttcatgaata ccccagtttc gctgatggat
     9241 gaccagatgg tcgacatggc gtttatcact caactgaccg gcttaaccga taagtggttt
     9301 tacaagctca tcaaggatgg tgcctttccg gcccccatca aactcggccg cagctcccga
     9361 tggctgaaaa gtgaagtgga agcctggttg caggcgcgta ttgcacaatc ccgtccgtaa
     9421 ttcctgacca ttacccgttc aaccgcagcg aatacactat ccggcctccg gaggcatttt
     9481 gctgcgtgct aaaggagaga atattatgca aaaacttgaa aaccggtgtg atctgctgct
     9541 cacccagcat cagaaatgga tggcaagtgt aacccggttt attgtcgctc acggaatggg
     9601 ctctccgcat cttcatggtt atcatcgcct gaccctggcc cacttttttc tgccggaaaa
     9661 aggcaccatc atctcggtgg caccacaggg actctatcag gtagtcaacc cggcaacgcc
     9721 accgttcatt cctgccattc aggaagggtt aatgaccagc attcagactc atgaaatcat
     9781 gttacttaca cattttaacc tgggtggtgt tttactcagt gaactacatc gtctgggaga
     9841 aagccgactg gcaaacaggc tgaacagtct gctccggcgt tttgacgatc gcgatctcta
     9901 ccacaccctg atatggctgt gctggtatga tctgatgtgc gcccactcca tgcagccctg
     9961 gactgaagag ttaaagcata aatcacacgc agaacttgaa agctgggctg tggcgcgcaa
    10021 acgggaaaag cgcgagcttg aactgatgat tgacgagtac ctgttatacg cctgttgatt
    10081 cataatcact cccgggcggt acgtagtcag tgataccgga atttccggag agggtcgcag
    10141 gtatattgtt tctgtgcaat tcatggttat tcacgttgga tgtagtgatt gctgcatcca
    10201 atgctatcgg aaagagatta accagcaaat ggttcctcaa atcgtattga tatttacctg
    10261 gcgcattgag caccaccatc tgcccccgtt cccacatcaa acggctggac cggaaaacga
    10321 tttgcttttc atgctccgtg gaaattcacg aaaaagttat tgggtcattc atcgaaaaaa
    10381 acatattctg ctgactggag tcatcaccca gaaataaacg tcaactgaac aataacgatt
    10441 ttttctttgt gggattccat acacttttcc atccccctct gaaaattagt catcaactca
    10501 ccaacacatc ttctgaaatt tgtattaaac ttattgctta aatagatgat ataatatctc
    10561 ttccattgca cggaatcagc aaaaactgtc attctggcaa tcttaacaag aacatttatc
    10621 ggttaatttt atcagtaaac aatggaatat catactgata aaatgaacat tcagggtaag
    10681 atgatgaaat tcacatgaaa aatgctgaag attatttatt tcatgcagat aaacgataaa
    10741 aaacaagaga gtatattttt cagtgtaaga gtcaactgtt catctccact gacaatcacg
    10801 gtcagcatac aaacaaagtg agtcctcctg cttagtcatt gcgtatcaga aactaaaaaa
    10861 caaaagattc tgcaaacaac gtgacatttt tatgacattt cccgaataca tgtatatcaa
    10921 taaacggtag tcatcgttga attaataagt cttacagagc tatacgtagc ttataaaacc
    10981 actcaacgac catcatcacc tgactattta gcgggagtat cgtctgtata aatccataaa
    11041 taataacacc tgttattaaa ataagaatgc tgtcagccgt aaactattaa cacaacacct
    11101 gtccactcta tctgttcttt taactcaacc ggcgtcgaaa atatttcctg attagtgcat
    11161 catagtcttc ttttttcttt ctcaaccatc aaaccaaaca caacattcac aaccacacaa
    11221 taaaacaaaa ccaaaacata agattaacaa tgccagtcaa caggaaaaca ctgaatattg
    11281 aggtgcgctg taacctggac agcgcatacg gcgcatgtga tcaacacagc ccattctttt
    11341 ctgtcatccc ccaaatgcag aacaaacaat cataaccaaa tgaatataaa agaaaatatg
    11401 atttttcacc atcataaaaa catcaatgta tctttatata aaaacactga taacatgaca
    11461 tagacattta aaaacataaa caaatcacaa caaaaacatt tgataatcac ttagtgacaa
    11521 aataaaattg agacgatttt gttataagag aggcgacatg gagtgagata atgaataacg
    11581 aacagatgct tatcaaatgc aaagatcccc gtaaatgtcg gttttatgcc gaatatctga
    11641 atcacaaata ccccaatgaa ttccctcagt ttgcgcctga caacccacaa aactgtatca
    11701 gaaatgttaa ttcgttttta aaagaaaagt attataaagc ttcaaacaat tcttttggtg
    11761 tttttggttc gactgcagaa gaagctctca gcaaagaaat taatgaactt gaaattattg
    11821 cagggcaggc aatactgcct gaagagagtt ttctctggtt gaaaactgac gaacttgcga
    11881 ctttctttac ctggactact atttatctgt cgaaggaaga ccatacaaaa ttcccgaaaa
    11941 taaaccataa ttcatcagga ataaaaaacg gaattgaagt caggaaaata cgaacagtta
    12001 ccgatgaaac gttaaatact tacaaaaaaa gtaaccttcc ggataatcca tcatcccata
    12061 acgaacgaat aaaagtaatc atttcatatt ttgactcctg ccattcttta attaataaaa
    12121 atgcaaaaag catatacctc gaggaactca gacaggcgtg gcttaaaaag aaaagcgctt
    12181 gtcaaaagtt taagtggctc cttcctgatg atgatgaaat gtgtcagtgg ttctggacaa
    12241 gactgaaaca aaaacaggat gaaaaacatc cagtacataa cccagtgacc cggtggttca
    12301 taccatcttc aacgaaagaa tattatcttg cctctcttgt cgcctttgct ttatggaaag
    12361 aagcgcctga taccattgaa ctgttcagaa cacgaataaa tcatgcctgg catcagaaaa
    12421 aacaaaagga caaatatcgg agtgatggta aaaaggccat taatatacat ataagaagca
    12481 atgtgaaaga aatgcttgat gagctcagaa ctgtttacgg tctgagaaca ggagagtttt
    12541 ttgaaatgct gattacagag aaatatcttg aacacaagcg aaggaagtaa ttcattacct
    12601 gttacattct aa
//
LOCUS       DAJVUK010000129        12062 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.129, whole genome shotgun sequence.
ACCESSION   DAJVUK010000129 DAJVUK010000000
VERSION     DAJVUK010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12062)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12062)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12062
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.129"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..192
                     /locus_tag="OQQ57_003225"
     CDS             <1..192
                     /locus_tag="OQQ57_003225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCS1957888.1"
                     /translation="RGAFFISALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGT
                     NTLLACCCLLRPEEVNSEY"
     gene            182..355
                     /locus_tag="OQQ57_003226"
     CDS             182..355
                     /locus_tag="OQQ57_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HCS1957889.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(404..1476)
                     /locus_tag="OQQ57_003227"
                     /pseudo
     CDS             complement(404..1476)
                     /locus_tag="OQQ57_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
     gene            complement(1548..4292)
                     /gene="torS"
                     /locus_tag="OQQ57_003228"
     CDS             complement(1548..4292)
                     /gene="torS"
                     /locus_tag="OQQ57_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HCS1957890.1"
                     /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQQQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPMLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSTVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPTALMGDPRRIRQVI
                     TNLLSNALRFTDEGQIVLRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL
                     RLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDVD
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
     gene            4375..5364
                     /gene="torT"
                     /locus_tag="OQQ57_003229"
     CDS             4375..5364
                     /gene="torT"
                     /locus_tag="OQQ57_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HCS1957891.1"
                     /translation="MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRA
                     WKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSF
                     PDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
                     GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAG
                     TAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQA
                     IRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK"
     gene            complement(5337..6029)
                     /gene="torR"
                     /locus_tag="OQQ57_003230"
     CDS             complement(5337..6029)
                     /gene="torR"
                     /locus_tag="OQQ57_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HCS1957892.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGECYFLAADVC"
     gene            6149..7321
                     /gene="torC"
                     /locus_tag="OQQ57_003231"
     CDS             6149..7321
                     /gene="torC"
                     /locus_tag="OQQ57_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HCS1957893.1"
                     /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
                     TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM
                     KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
                     GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
                     VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG
                     APEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDIAGKAHGDKKEEK"
     gene            7321..9901
                     /gene="torA"
                     /locus_tag="OQQ57_003232"
                     /pseudo
     CDS             7321..9901
                     /gene="torA"
                     /locus_tag="OQQ57_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415517.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
     gene            9898..10497
                     /gene="torD"
                     /locus_tag="OQQ57_003233"
     CDS             9898..10497
                     /gene="torD"
                     /locus_tag="OQQ57_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HCS1957894.1"
                     /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LWQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNK"
     gene            complement(10590..10895)
                     /gene="cbpM"
                     /locus_tag="OQQ57_003234"
     CDS             complement(10590..10895)
                     /gene="cbpM"
                     /locus_tag="OQQ57_003234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HCS1957895.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(10895..11815)
                     /gene="cbpA"
                     /locus_tag="OQQ57_003235"
     CDS             complement(10895..11815)
                     /gene="cbpA"
                     /locus_tag="OQQ57_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HCS1957896.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         2895 a         3096 c         3194 g         2877 t
ORIGIN      
        1 cgtggagcct tttttatatc tgccttattt ttcttcaacg ctgtatgtat agtaagcgat
       61 aacctgttga ttattgaatc tttcggggag atggcttata acatttctta cctgaccagg
      121 gtaccgggaa ccaacacctt actggcgtgt tgctgtcttt taagaccaga agaggttaac
      181 agtgaatatt gaagagttaa aaaaacaagc cgaaacggaa atcgccgact ttatcgcgca
      241 aaaaatcgcc gagctgaaca agaatacagg gaaagaagtc tctgaaattc gcttcaccgc
      301 acgagaaaaa atgaccgggc ttgaaagtta tgatgtcaaa atcaaaataa tgtgattttg
      361 tgaacatcac cccgtgcgag gtgatgttcc gcttgttgct aatttagtga tcaatcattg
      421 gcgcttgtgg aattaagcgt cggtacaatt cctccggcac cgggctttgc catactcccg
      481 catacattgc gtaaccaatc accgcgaaca taatccccag aaccagtagc gtcattaacc
      541 agccagacaa cgcaaaagct tttttatttg ccgcaggttt ttgcagtgaa aaggtcaatg
      601 ttgaggctac cggacatgac tctacgcaag tcatacagcc ggtacattcc actgttcgta
      661 cctgaattaa tttatctacc gggatccgtg atgggcaatt ttttgcgcat ttgccacagc
      721 cgatacaact ttcggcattg cgacgaatct taaacggcga taatagcgaa accacgccca
      781 tcagcgcgcc atatgggcaa agataacgac accaggcatg gcgaataaac aggctggcaa
      841 tcagcaaaac ggtcacgctg attaatgtcg cggtccccat atgacgaaag aaatcgagca
      901 tttttacgtc catcaccacg ctgtagggcg acaacataaa atagtgaatc gcctgagcgg
      961 gcatcaataa cgcgatatag agaaaaaaac tcaacagcaa atacttcacg ccgcgcagag
     1021 gaatatccag ccagcgggga aggacacatt gccgaccaaa cagtttgtta ccgagatcgc
     1081 cgattaattc agaaagcgta ccaaccgggc ataaccatga gcaaaaggcc tttttgagta
     1141 atagactgat gacgataaaa gcgaccaata acagcatcgc ggagcgtgga cggacggtaa
     1201 ctgacctgtt gtaaggctat atttcagatt catcagaccg gcaatcggta gccagccttc
     1261 gatacctccc ggtctggcga caaatgtcgt gctacttgcc gtttcgtaat agcgcaccca
     1321 ataccagaac gtgatggcaa tataaatatt cattgccaac agtaataatt gcgtcgcttt
     1381 acgccaggtc gtggcattgc gccagtcatt ccacggtaat ttgccgcccg tcgtgcctgg
     1441 ccgccgctgc cagcgggttc tttttttctc tgccatgatt ttgtcagtcc gttaagttgc
     1501 ataccaaatg ccactatttt agttgttctt aactggctga tattgattca aatcgcgttc
     1561 aggtctttct tatgcaacca tgcttccaga gcggcaacac tgcgtgtaat ttcttcgtgt
     1621 ggaagggggg cagataatgg ctgctgctcc agttgtgcgc atagctggct ggcgatacgc
     1681 attcccaaac tcgagcaact gctttttagc tgatgcgcgg cacgctttat tttctcgcta
     1741 tcctgactgg cgcgggcaat gtcgatttca tcgagaagcg gcagggcatg ttgtgtaaat
     1801 aataccagcc attcgtggat cttctccgtc cccattaact gagcatcttc attgagttgc
     1861 gatacatcca gcgattgatc gttattgact tgcagttgga gatagtgcgc cagtaactga
     1921 ccgagcactt cacgcggcac cggtttaggg ataatcccgc ggaataatga actggtacgc
     1981 tggcgcagcg tttcgtcaat gacatgggcg ctaaagccaa tcaaaaccag cgacggatat
     2041 tgctgtgcca gttgtcgggc aagcgtaatg ccgtcgacat ccggcagatc aaaatccacc
     2101 agtgcggcag caaacggttc gctattttgc agtgtctcta aagcctgcgc ggcattgcca
     2161 acagcaacaa cctgcgcacc actggtgttc agcatctcaa cggtaattcg ctgggttagc
     2221 gggttatctt caattaacag caaacgtaaa ccgtcaagac gcaccgcctg attgactgtt
     2281 tttggcacgg gtgccgtggc aacacgtaac ggcaagcgta aacaaaaaca gcttccaacc
     2341 tccggcgtgc tggtggcgct cagttcgccg cccatcgcct gggccagacg gctactgata
     2401 gtcagtccca gcccggtgcc gccgcgtttg ccgcttacct gcacaaatgg ctggaagatt
     2461 tctgccagtt tcgcgggatc aataccgcag ccgctgtctt ccacttcgac cagccattgc
     2521 tcgccatcag tgcggctacg taaaacgatc tgcccttcgt cagtaaaacg cagggcgttg
     2581 ctcaacaggt tggttataac ctgacgaata cgtcgcggat cgcccattaa cgcggtcggt
     2641 acatcgtcgg caattgctgt tgccaggcga atcgggcgac ctttcacccg tccgctcatt
     2701 aattgcaggg tactttccag cagcgggcgc ggttcaaagg gctcatcgct gaccgaaaca
     2761 ttcttgccac ctgcttcgat agccgaataa tcgagaatat cgttgaggat ggtcagcaac
     2821 gattcgccag agtcggtaat cgcccgcaaa tcatcacgct gggcgttaag tgcggggtta
     2881 tctgccagca gttgagcagt gccgagaata ccgtacagcg gtgtgcggat ctcatggctc
     2941 atcgccgcca gaaaggccga ttttgcctgg ctggcttttt ctgcttccgc ccgtgcctgt
     3001 cggtgttcta tcaccagttc ctgcaattca gctgtacgcg ctttgacctg cgccgccagc
     3061 tgttcacggt ggcgattcag tgcatgaaca gtgctgcgaa acgcatccat cagccgcccg
     3121 atggtatcca gctcccgtac gccagcggtt tccgggaaag gggagtcaat atcaccgtcc
     3181 agcagccgtt gcagcgcctg cgtttgttcg gcaagtggac gcgtgactga gcgataaacc
     3241 acgcgccaaa ggatcagaat cagtgcgcaa agtgaaacca tccccagcaa taacaggctg
     3301 tattgcccgc gtgcactggc tttttccaga tgcgccagtc cgtgctgatt acgcagctca
     3361 atggtgtcga ccagctgact gacttcgcta ctaaactgcg cgaactgggc gatgttattt
     3421 tgtgcgagag tttgtaggtg attgctgatt tcactgtcct gctgatacag cgccagcaaa
     3481 tcgctatatt ggctaacggt agttaacgtt gttgcgacct gcgcacgaac acccggatct
     3541 tcaatgcgta tttgccgacg ttgcagaatt ttcaccgcat tattgagctg cttttccagc
     3601 attggtgcat ttttctggat ctgctccagc cccagattca tcaccatttg ctgcacccgc
     3661 agagcgctaa ggcgcagttc attcatctgg ttaacatact caagatcgat atcaatcagc
     3721 cgatcgagtg cactttcagc agcctgacgc tgatcttgtt cgatcaaatc gtaaatcccg
     3781 gcctgggtcg ctccagcgga agttgtcgca ttattcgcct gaccttgcgc caggcgtgcg
     3841 atctcatcgg cggcagcgac tatctgctga ctgagttgct gttgttgctg gcgtagttgc
     3901 agacgccgcc ccaccagttc cccttgctga cgtaacgaac gggagatctc ctgctcctgt
     3961 tgttcaatag cggtggtatc aaaaccttgt tcccgtaacg cttgcagcaa cgcattaatc
     4021 ttcaggcttt gtgcggtgag cattcgcccc tgcgcctgcc acatcttttc gttatcggca
     4081 ctggtcaggt tctgcgcggc gaaaagttcc caggcgctgg cttcgctcaa ctggcgcgcc
     4141 atattcatgg taggaatcaa tgcctgagtg ttgtcttttt ccacctggct gataaagcgc
     4201 aggttgtacc atcccaccag ggtactggtc agggttaaca gcgccatcag ggcaaagccc
     4261 atccagagtc ttcgggtcag ggttaaattc acggtcggtg cactttaggt gaaaaaggtt
     4321 gagtcgcaaa gcagaatgca tctagcataa agccttatta ttgattaggc tatcatgcgc
     4381 gtactgctat ttttacttct ttcccttttc atgttatcgg cattttcggc tgataacctg
     4441 ttgcgctggc atgatgcgca gcattacacg gtgcaagcct ctacgccgct taaagccaaa
     4501 cgcgcatgga aactgtgcgc gctttatccc agcctgaaag attcatactg gttatcgttg
     4561 aactatggta tgcaggaggc aggcggctac agccagttgg ctacccagca agcacaaatc
     4621 gaccagtgta aacagtgggg cgcagaggcc attttgctcg gtagtagcac tacgtcattt
     4681 cccgacctgc aaaagcaggt agcaaatctg ccggtgatcg aactggtaaa tgctcttgat
     4741 gatcccctgg tgaaaagccg cgttggtgta ccctggtttc agatgggcta tcaacctggg
     4801 cgatatttgg tgcaatgggc gcacggtaaa ccactgaacg tgctgttgat gcccggaccc
     4861 gataatgccg ggggcagtaa agagatggtc gagggttttc gcgcagccat tgccggaagc
     4921 ccggtgcgta ttgttgatat tgcgcttggt gataacgata ttgaaatcca gcgtaacctg
     4981 ttgcaggaga tgctggaacg ccacccagaa atcgacgtcg ttgccggaac ggccattgcg
     5041 gcagaggcgg caatgggtga agggcgtaac ctgaaaacgc cgcttaccgt ggtgtcgttt
     5101 tatctttcac atcaggtgta tcgcgggctg aagcggggaa gagtgattat ggctgccagc
     5161 gatcaaatga tctggcaggg ggaactggcg gttgagcagg ccatcaggca attacagggg
     5221 caatcggtgt ctgataatgt cagcccaccg attttagttc tgacgccgaa aaatgccgac
     5281 cgtgaacata ttcgccgctc gctgtcacca gggggatttc gtccggtcta tttttatcag
     5341 cacacatcag cggctaagaa ataacattca ccatgttgcg tcaccagtaa atccgcgctg
     5401 agtttatgac gtaaacgacg aattaacaca tcgacggtgc gcaggtcagg gttttccacc
     5461 cgacgcgcag aaagcatacg tagcagacgt tcacggctga gaatttcgcc cggattcgtc
     5521 acaaatgcca ccaacatttc atactctgcg cgggtcagtt taatcggctc gccatcccgc
     5581 tccagcgtat ggcgcgacac attcaggcaa taaccggcaa agcgatagca gttgtcctga
     5641 gtgtgcggtt gagcttgtcg cgcgaggtcg attcgccaga gcagattttt cacccgtact
     5701 accagttcgc gcagttccag cggtttggtg acgtaatcgt ctgcgcccat ttccagccca
     5761 acaatacggt caatccgatc gctgcgtccg gtaaccagaa taatccccac cgttgagcgt
     5821 tctcgcaggg cgcgggttaa catcaggcca ttttcatcgg gtaagttgat atccagcaga
     5881 attaaatcta ccggctgatt ctgcataatt tcccgcagcc cggcaccgct cgctgtaacg
     5941 gaaacggtat acccctcctg agtgaagtaa gattgtaatc gcgcctgggt aaccggctca
     6001 tcttcaacaa taacaatgtg atgtggcatc agagggtttt actcattctg ttcatattct
     6061 gccgtaagcc gttcatcctg accagtgccg ctgttcatat ttgctcatta agatcgcttc
     6121 actaaaccat aattttacag gggctattat gcggaaactc tggaacgcgc tacgccgacc
     6181 cagtgctcgt tggtcggtac tggcgctggt cgcaattggg attgtgattg gcattgcgct
     6241 gattgtattg ccacacgttg ggatcaaagt caccagcaca accgaatttt gtgtcagttg
     6301 ccacagtatg caaccggtgt atgaagaata taaacagtcg gtgcatttcc agaacgcctc
     6361 cggcgtgcga gctgaatgcc atgactgtca tatcccgccg gatattccag gcatggtgaa
     6421 gcgcaaactg gaagcgagca atgatatcta ccagaccttt attgctcact ccattgatac
     6481 acctgaaaaa ttcgaagcca aacgcgcgga acttgccgag cgtgaatggg cgcgaatgaa
     6541 agaaaacaac tcggcaacct gccgctcctg ccataactac gatgcgatgg atcatgcgaa
     6601 gcagcatcct gaagcggcac gtcagatgaa ggtggcagcg aaagataatc aatcctgcat
     6661 cgactgtcat aaaggtattg cccaccagtt accggatatg agtagcggct tccgtaagca
     6721 gttcgatgag ctgcgcgcca gtgctaatga cagtggtgac acgctgtact ctattgatat
     6781 taagccaatt tatgcggcga aaggcgataa agaagcctct ggttctctgc tgcctgcttc
     6841 ggaagtgaaa gtccttaaac gtgacggcga ctggctgcaa attgaaatta ccggctggac
     6901 ggaaagcgcc ggacgtcagc gtgtactcac ccaattccca ggtaaacgca tctttgttgc
     6961 ctcgattcgt ggtgatgtgc agcagcaggt aaaaacgctg gagaaaacca ccgttgccga
     7021 caccaatacc gagtggagca agttgcaggc cactgcgtgg atgaagaaag gtgatatggt
     7081 gaacgatatc aaaccgatct gggcttatgc ggattcgttg tacaacggca cctgtaacca
     7141 gtgccacggc gcaccggaaa tctctcactt tgatgctaac ggctggattg gcacgctcaa
     7201 cggcatgatt ggctttacca gtctcgataa acgtgaagaa cgcaccttgt tgaaatatct
     7261 gcaaatgaat gcgtctgaca tcgcaggtaa ggctcacggc gataagaagg aagaaaaata
     7321 atgaacaata acgatctctt tcaggcatca cgtcggcgtt ttctggcaca actcggcggc
     7381 ttaacagtcg ccgggatgct ggggccgtca ttgttaacgc cgcgcagtgc gactgcggcg
     7441 caagcggcgg atgtcatctc gaaagagggc attcttaccg ggtcgcactg gggggctatc
     7501 cgcgcgacgg tgaaggatgg tcgctttgtg gcggcaaaac cgttcgaact ggataaatat
     7561 ccgtcgaaaa tgattgccgg attgccggat tgccggattg ccggattgcc ggattgccgg
     7621 attgccggat cacgtacaca acgcggcgcg tattcgttat ccgatggtac gcgtggactg
     7681 gctgcgtaag cgccatctca gcgatacctc ccagcgcggt gataaccgtt ttgtgcgcgt
     7741 gagctgggat gaagccctcg acatgttcta tgaagaactg gaacgcgtgc agaaaactca
     7801 cgggccgagt gccttgctga ccgccagtgg ttggcaatcg acggggatgt tccataacgc
     7861 ttcggggatg ctggcgaaag ctattgcctt gcatggtaat agcgttggta cgggcggaga
     7921 ttactctacc ggtgctgcgc aggtgatcct gccgcgcgta gtcggttcga tggaagtgta
     7981 tgaacagcaa acctcctggc cgctggtatt gcagaacagc aaaaccatta tgctgtgggg
     8041 ctccgatttg ctgaaaaacc agcaagcgaa ctggtggtgc ccggatcacg atgtttatga
     8101 atattacgag caactaaaag cgaaagtcgc cgccggtgaa attgaggtca tcagcatcga
     8161 tccggttgtc acatccaccc atgagtatct ggggcgcgag catgtgaagc acattgcggt
     8221 taacccgcaa actgacgtgc cgctgcaact ggcgctggcg tatacgctgt acagtgaaaa
     8281 cctgtacgac aaaaacttcc tcgctaacta ctgtgtaggt tttgagcagt tcctgccgta
     8341 tctgctgggt gagaaagacg gtcagccgaa agatgccgca tgggctgaaa aactgaccgg
     8401 cattgatgcc gaaaccattc gtgggctggc gcggcagatg gcggcgaaca gaacgcaaat
     8461 tattgctggc tggtgcgtgc agcgtatgca gcacggtgaa cagtgggcgt ggatgattgt
     8521 ggttctggcg gcgatgctgg ggcaaattgg cctgccaggt ggtggttttg gttttggctg
     8581 gcactacaac ggcgcaggca cgccggggcg taaaggcgtt attctgagtg gtttctccgg
     8641 ctctacgtcg attccgcctg ttcacgacaa cagtgactac aaaggctaca gcagcaccat
     8701 tccgattgcc cgttttatcg atgcgatcct cgaaccgggg aaagtgatca actggaacgg
     8761 taaatcggta aaactgccgc cactgaaaat gtgtattttt gccggaacta acccattcca
     8821 tcgccatcag cagatcaacc gcattattta aggctggcgc aagctggaaa cggttatcgc
     8881 catagataac cagtggacct caacctgccg ctttgccgat atcgtactgc ctgcgaccac
     8941 gcagtttgag cgtaacgatc tcgaccagta cggcaaccac tccaaccgtg gcattatcgc
     9001 catgaaacag gtggtgccgc cgcagttcga ggcgcgcaac gactttgata ttttccgcga
     9061 gctgtgccgt cgctttaatc gcgaagaagc ctttaccgaa gggctggacg aaatgggctg
     9121 gctgaaacgc atctggcagg aaggtgtaca acaaggcaaa ggacgcggcg ttcatctgcc
     9181 agcgtttgat gacttctgga ataacaaaga gtacgtcgag tttgaccatc cgcagatgtt
     9241 tgttcgccac caggcattcc gcgaagatcc ggatctcgaa ccgctgggca cgccgagtgg
     9301 cctgattgag atctactcga aaaccatcgc cgatatgaac tacgacgatt gtcaggggca
     9361 tccgatgtgg tttgagaaaa tcgaacgctc ccacggtggg cccggctcgc agaagtatcc
     9421 gttgcatctg caatctgtgc atccggattt ccgacttcac tcgcagttat gtgagtcgga
     9481 aactctgcgt cagcaatata cggtagcggg taaagagcca gtattcatta acccgcagga
     9541 tgccagcgcg cgcggtattc gtaacggtga tgtggtacgc gtctttaacg ctcgcggtca
     9601 ggtgttggca ggggcagtag tttctgaccg ctatgcaccc ggcgtggcac gaattcacga
     9661 aggggcatgg tacgatccag ataaaggcgg cgagcctggt gcgctgtgca aatacggtaa
     9721 ccccaacgtg ctgaccatcg acatcggtac ttcgcagctg gcgcaggcga ccagtgcgca
     9781 cactacgctg gtggaaattg agaagtacaa tggagcagtg gagcaggtga cggcgtttaa
     9841 cggccctgtg gagatagtgg cgcagtgcga atatgttccc gcgtcgcagg tgaaatcatg
     9901 accacgctga cagcacaaca gattgcctgt gtttacgcct ggctggcgca gttgttctcc
     9961 cgtgaactgg acgatgaaca actgacgcaa atcgccagtg cgcagatggc ggaatggttt
    10021 tcgttgctga aaagcgaacc gccgctggct gcggcggtga atgagctgga aaactgtatt
    10081 gccacgctga cagtacgtga cgatgcccgt ctggaactgg ccgctgactt ttgcggcctg
    10141 tttttgatga ctgataagca ggcggcgctg ccgtatgcat cggcctacaa acaggacgag
    10201 caagagatta aacgcttgtt agttgaggca gggatggaaa ccagcggcaa tttcaacgaa
    10261 ccggcagacc atctggcgat ctatctcgag ttgttgagtc atctgcattt ttcgctggga
    10321 gaggggaccg ttcctgcgcg aagaatcgac agtttgcggc aaaaaacact gacggcgctg
    10381 tggcaatggt taccagagtt tgctgcgcgt tgccatcagt atgacagctt tggtttttac
    10441 gcggcactaa gccagttatt gctggtgtta gtggagtgcg accaccaaaa caaataacgt
    10501 cgtttatgcg cctgaaaaga cgcgtttagc gtcgcatcag gcattatggc gcagttgccg
    10561 gatgcgtcat cacatccggc aaacacacat cacggatgag ctacaaaccg ggaaagccgc
    10621 tggcgtagca ggcggttttc ctgcttcagg tgtgcaatat catccattaa cgtcagcgcc
    10681 accgcgatcc ccggccagtc cagagccagt tcatgacgca ggcgtaccgc gcgttgcacc
    10741 acaatggcgg catggtcgtc aaatacccag gttgtttcct ggatctcacg cggttcaacc
    10801 acccccaaac cgacaatttc attcaactcc tcttcagaga tgccggtatg caggcaaaat
    10861 tcggtaatag taaaagtcac cgtaacatta gccatcatgc tttcccccaa tctttacgtg
    10921 gatcaaaaga cgactgggcg tctgccagtt gctgccacag cgcggcagtg ttttcatccg
    10981 gtttcggcgg catcacgatt ttcagtaccg catacagatc gccggtctgt tttttgctca
    11041 ccagaccttt gcctttaacg cgcaatcgtt gcccggcctg gctgcctggc gggatagtca
    11101 gcaaaatgct ttctttcagt gttggaacgg tgactttagc acccagcgcc gcttcccacg
    11161 ggctaaccgg caccacaatt tccagatcct ggccgacaat atcgaacagc ggatgtggcg
    11221 caatatgaat caccagccac aaatcgccat ttggaccacc gttttcgccc ggcgtcccct
    11281 ggcctttcag acggatgcgt tgaccattgc cgacgcccgc cgggatcttc acattcagcg
    11341 ttttcgggat ttcctgttcg atcatgccaa aggcgttata aaccggcagg ttatagctga
    11401 tggtacgctt atgctcagtc agcgtttctt cgaggaatac cgccacttcg atttcaatat
    11461 cgtggccgcg tgcggcgggg cgttgacggc tctggcgggc atgctgaccg aaaattgacg
    11521 agaagatatc gtcaaaatct tcggcattaa aactctgacc gtcgccatga tggaactgac
    11581 ggttaaattg cggatcgttg cgatgttgcc acatctgatc atactcagcg cgacgttgtt
    11641 catcacttaa cacttcccag gcttcagcga cctctttgaa gcgggcttcg gcatccggtt
    11701 ctttgctgac atcaggatgg tatttacggg ccagtcgacg ataggcggtc ttgattgtct
    11761 tgagatcgtc cgtcggtttc acgcccatga tggcgtaata atcctttaat tccatagcgt
    11821 tatctcgcgt aaatcaacac aaattgaagg aacccctgta aggtaactcc tataagtgta
    11881 gggtaatcct caaaatttca tatgccaaca cagaatatgt tattgaaatc atcgtggaga
    11941 ggaggtcgcc atcaatatgg gttgctgaac atattttaaa caggtgaaaa agggtgagcg
    12001 atttttgata gttgaaccag gcactttaag tttaactagg gcgtcattat ttattaaatt
    12061 tt
//
LOCUS       DAJVUK010000130        12040 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.130, whole genome shotgun sequence.
ACCESSION   DAJVUK010000130 DAJVUK010000000
VERSION     DAJVUK010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12040
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.130"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..410)
                     /locus_tag="OQQ57_003236"
     CDS             complement(<1..410)
                     /locus_tag="OQQ57_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HCS1957897.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYVLTTQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSV"
     gene            566..1606
                     /gene="gpr"
                     /locus_tag="OQQ57_003237"
     CDS             566..1606
                     /gene="gpr"
                     /locus_tag="OQQ57_003237"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HCS1957898.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(1646..2140)
                     /locus_tag="OQQ57_003238"
     CDS             complement(1646..2140)
                     /locus_tag="OQQ57_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HCS1957899.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
                     IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            2331..3215
                     /gene="yghA"
                     /locus_tag="OQQ57_003239"
     CDS             2331..3215
                     /gene="yghA"
                     /locus_tag="OQQ57_003239"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HCS1957900.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGQAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(3487..3912)
                     /gene="exbD"
                     /locus_tag="OQQ57_003240"
     CDS             complement(3487..3912)
                     /gene="exbD"
                     /locus_tag="OQQ57_003240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HCS1957901.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(3919..4653)
                     /gene="exbB"
                     /locus_tag="OQQ57_003241"
     CDS             complement(3919..4653)
                     /gene="exbB"
                     /locus_tag="OQQ57_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HCS1957902.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLFNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            4905..6092
                     /gene="metC"
                     /locus_tag="OQQ57_003242"
     CDS             4905..6092
                     /gene="metC"
                     /locus_tag="OQQ57_003242"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HCS1957903.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFESMEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            6232..6891
                     /locus_tag="OQQ57_003243"
     CDS             6232..6891
                     /locus_tag="OQQ57_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1957904.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGMLFVVIKKKYCN
                     A"
     gene            complement(6931..7830)
                     /gene="yqhC"
                     /locus_tag="OQQ57_003244"
     CDS             complement(6931..7830)
                     /gene="yqhC"
                     /locus_tag="OQQ57_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YqhC"
                     /protein_id="HCS1957905.1"
                     /translation="MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            8024..9187
                     /gene="yqhD"
                     /locus_tag="OQQ57_003245"
     CDS             8024..9187
                     /gene="yqhD"
                     /locus_tag="OQQ57_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HCS1957906.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
                     GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
                     FIAAADNYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
                     GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
                     EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
     gene            9292..10119
                     /gene="dkgA"
                     /locus_tag="OQQ57_003246"
     CDS             9292..10119
                     /gene="dkgA"
                     /locus_tag="OQQ57_003246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgA"
                     /protein_id="HCS1957907.1"
                     /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVIIAIQKALEVGYRS
                     IDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYID
                     LYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ
                     IELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVI
                     RWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG"
     gene            10319..11245
                     /locus_tag="OQQ57_003247"
     CDS             10319..11245
                     /locus_tag="OQQ57_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708829.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HCS1957908.1"
                     /translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRQIYQNYKSDASTPY
                     FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
                     ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
                     ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
                     QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
                     REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
     gene            11296..11553
                     /gene="yqhH"
                     /locus_tag="OQQ57_003248"
     CDS             11296..11553
                     /gene="yqhH"
                     /locus_tag="OQQ57_003248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YqhH"
                     /protein_id="HCS1957909.1"
                     /translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
                     QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
     gene            11633..>12040
                     /locus_tag="OQQ57_003249"
     CDS             11633..>12040
                     /locus_tag="OQQ57_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001603762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957910.1"
                     /translation="MRRWHTCFFILLFCGFSGNVLCKESINEAIERLYQPLTSNDDIP
                     ITDEFSLDLRSNMSATPGKMTPWLNNNLLCRCVDDAFVSAEIIQSTHLNGGRTHVLLQ
                     LVIKQNRTDIHRLLGLMLVRENDNHRWLIEDIDD"
BASE COUNT         3117 a         3054 c         3002 g         2867 t
ORIGIN      
        1 acggaactta agccgtcagg tgccagggcg atataccccg ccttcgtcac tcgccgtgcc
       61 acatcttcga tatacggatt cagtccacga ttctcatgca ccaccaccac ggctggcgtt
      121 ttgccgctca tttttgcggg tttcaccaga taaccccgta cctcgccgtg accatttggc
      181 gaaggatacg tgatgtactc agcaacaatc tccgggtcgg taaactctac ctgagtcgtc
      241 agcacataat ttggcttgag caaatcaaac aacgctaatg ccgtcatccc gcccaccgca
      301 tacttcgccg caaggttgag gaactcacgt ttcgaaattt tcccgtgagc gtaatagtcg
      361 tagtaatcca acaactcttg tgggaaatct ttggcggtta aacgcggcat cgttgcattc
      421 ctcaactggt gttttttaag caaagcataa gcgcgtgttt ttgcccagtt tttcgtcact
      481 ctgtgagcca gactacggga tacgcgctgg cgaatcgcta aactagaaac attgtttcga
      541 aattgaacgg tggaaaggag aggtcatggt ctggttagcg aatcccgaac gttacgggca
      601 gatgcagtac cgctattgcg gaaaaagtgg tttacgcctg cccgcgttat cgctcggttt
      661 atggcacaat ttcggtcacg ttaacgcgct ggaatcacag cgtgcaatcc tgcgtaaagc
      721 gtttgattta ggcattacgc actttgattt agccaacaat tacgggccgc ctccaggaag
      781 cgcagaagag aactttggtc gcctgctgcg ggaggatttt gccgcttatc gcgatgaact
      841 gattatctct accaaggctg gctacgatat gtggcccggc ccttacggct ctggcggttc
      901 acgtaaatac ctgctcgcca gcctcgacca aagcctgaag cgtatggggc ttgagtatgt
      961 cgatatcttt tactctcatc gcgtcgatga aaatacgccg atggaagaaa ccgcctctgc
     1021 gctggctcat gcggtacaaa gcggtaaggc gctgtatgtc gggatctcct cttactcgcc
     1081 agagcggacg caaaaaatgg tcgagttgct gcacgagtgg aaaattccgc ttttaattca
     1141 tcaaccttcg tacaatttac tgaaccgctg ggtggataaa agcggcctgc tggataccct
     1201 gcaaaataac ggcgtgggct gtattgcctt tactcctctg gctcagggat tgctgaccgg
     1261 aaaatatctc aacggcattc cgcaagattc acggatgcat cgtgaaggga ataaagttcg
     1321 tggtctgacg ccgaaaatgc ttaccgaagc caacctcaac agcctgcgct tattgaatga
     1381 aatggcacag cagcgtggac aatcaatggc gcaaatggcg ttaagctggt tgctgaaaga
     1441 tgatcgcgtg acgtcggtat tgattggtgt cagccgcgcg gagcaactag aggagaacgt
     1501 gcaggcgctg aataatctga catttagcac cgaggagctg gcgcagattg atcagcatat
     1561 cgccgatggc gagctgaatc tgtggcaggc gtcttccgat aaatgacctg ttaataacgg
     1621 gcgcgcgaac cgcgcccgaa tcagatcagt gattatgacg agtcagtcgg tcaagatagc
     1681 ccatcacaaa tgcagagagc acaaacgtca gatggataat gacgtaccac atcagtttgt
     1741 tatccgggac atttttcgca tccataaaga cgcgcagtaa gtgaatggaa gaaattgcca
     1801 caatcgacgc tgctactttg tttttcagcg acgttgcgtc cattttcccc agccagttca
     1861 gcttctcttt gttctcggag atatccagct gcgagacgaa attctcataa ccggaaaaca
     1921 tcaccatcac cagcaaaccg ccaaccagcg tcatatccac cagcgacagc aacacgagga
     1981 tcaaatctga ttccgccatc gagaagatat tcggcagtac gtgaataatc tcctggaaga
     2041 acttcagcgc cagggcaact aacgccagcg aaaggccaaa gtacacgggg gcaagcagcc
     2101 agcgagaagc atacattgca ttttcaagaa aacgttccat acattcctgt cgtgtagtta
     2161 aaacgggcaa cagtatatcg caattgagta aacagcacgc aacagcaaat caacatatac
     2221 gttaaacctt tgtcgcataa ttctgaggtt tagggatctt cctggttccc ttatcaacgc
     2281 atcgagagcg tctaccctta aaagacgttg aacctgaagg gagaaaaaca atgtctcatt
     2341 taaaagaccc gactacgcag tattacactg gtgaatatcc caaacagaaa caaccgacgc
     2401 caggcatcca ggcgaagatg acaccggtac cggattgcgg cgagaaaacc tatgttggta
     2461 gcggtcgcct gaaagatcgt aaagcactgg tgacaggggg cgattccgga ataggtcgcg
     2521 ctgccgccat cgcttacgcg cgtgaagggg ctgacgtggc gatcagttat cttcccgtgg
     2581 aagaagaaga cgctcaggat gtgaaaaaga tcattgaaga atgcggacgc aaagccgttc
     2641 tgctgccagg cgatttaagc gatgagaaat tcgcccgttc gctggttcac gaagcgcaca
     2701 aggcgttagg cgggctggat attatggcgc tggtcgccgg gaaacaggtt gccattccgg
     2761 atattgcaga cctcaccagc gaacagtttc aaaagacctt tgccattaac gttttcgcgc
     2821 tgttctggct aacccaggaa gcgatccccc tgctaccgaa aggtgcaagt atcatcacca
     2881 cttcgtcaat ccaggcatac cagccaagtc cgcatttact ggactatgcg gctacgaagg
     2941 cggcgattct gaactacagc cgtggccagg caaaacaggt cgcggagaaa ggtattcggg
     3001 tgaatattgt cgcgccaggc cctatctgga cggcactgca aatttccggc ggacaaacgc
     3061 aggataagat cccgcagttt ggtcagcaaa cgccgatgaa gcgtgcgggg caaccggcgg
     3121 aactggcccc tgtatatgtt tatctggcaa gtcaggagtc gagctacgtc accgcagaag
     3181 tgcacggtgt gtgcggcggc gagcatttag gttaaaaaaa tgcccggttg tgaaaagcaa
     3241 ccgggcatca ttgtgaattc actcttacct gatgtggcga aaacgcctta tccgcctaca
     3301 aacgcatgaa gattcaacat gttgcaatag attttgtagg cctgataagc gtagcgcatc
     3361 aggcattgag cacctaatgc cggatgcggc gtgaacgcct tatccggcct acaaacgcac
     3421 gaagattcaa catgttgcaa tagattttgt aggcctgatg agcgtagcgc atcaggcaat
     3481 tctactttac ttcgctttgg cggtttcttc gccgaccaga cctatcttca ggtaacccgc
     3541 ctgatgcagc gtatccatta ccttcatcaa cgtctcgtaa tcgacggttt tatccgctcg
     3601 gaagaagatg gtggtgtctt tcttgccttc ggttaacgca ttcaacgccg taatcattgt
     3661 ttcatcggtg accggatcgt taccgataaa catcgagttg tctgccttca ccgacagata
     3721 aaccggtttt tccgggcgcg gctgcggcgt gctggtagaa gcaggcaagt tcaccttcac
     3781 atctaccgtc gctaacggtg ccgccaccat aaagataatc agcagaacca acatcacgtc
     3841 gataaacggc gtcacgttga tatcatgcat ttcgccgtta tcgtcgaggt tttcgttaag
     3901 atgcattgcc atcggatatt atcctgcgcg taatttttgt gcgacacgaa ccggatgcgc
     3961 agcggcgctg gcttccagat ccaggtcacg gctttgcagc aacaatacct gcgctgcaac
     4021 atcacccagc atcgctttaa agccgccaat ctggcgtgca aatacgttat agataacgac
     4081 cgcaggaatc gctgccacga ggccgattgc cgttgctaac agagcttctg cgatacccgg
     4141 cgcaacgact gccaggttag tggtctgcgt ttgcgcgata ccaataaagc tgttcatgat
     4201 gccccagacc gtaccaaaca gaccaacgaa cggagaaatc gcgccgatgg ttgccagata
     4261 gccgttaccg cggcccattt gacgacccac tgcggcgacc cgacgctcca gacggaagct
     4321 ggtacgttct ttaatacctt cgttatcgtc gctgccttct gacagttcca gctcattctg
     4381 cgcttcattg aacaaatgca ggcttaagct tttgctacca aaatcagcgg cgatatcgtt
     4441 ggcctggttt aaggaacgcg cttcagccag cagttgctgc tcgcgcttta ggcgacgctt
     4501 ctgattgaag aactctacgc tcttactgaa gaagattgcc caggtgacta cggaggccaa
     4561 aataagccca atcatcacgc acttaacgac aatatcggcg tgctgataca taccccagac
     4621 ggaaaggtct gtctgcatta aattattacc cactgtgtat ctccaggacg caagtcacaa
     4681 aatctgcgca taataatatc aaaacgacgt cgaattgata gtcattctca ttactatttg
     4741 catactgccg tacctttgct ttcttttcct tgcgtttacg cagtaaaaaa gtcaccagca
     4801 cgccatttgc gaaaattttc tgctttatgc caattcttca ggatgcgccc gcgaatattc
     4861 atgctagttt agacatccag acgtataaaa acaggaatcc cgacatggcg gacaaaaagc
     4921 ttgatactca actggtgaat gcaggacgca gcaaaaaata cactcttggc gcggtaaata
     4981 gcgtgattca gcgcgcttct tcgctggtat ttgagagtat ggaagccaaa aagcacgcga
     5041 cgcgcaatcg cgccaatggc gagttgttct atggacggcg cggaacgtta acccattttt
     5101 ccttacaaca agcgatgtgt gaactggaag gtggcgcagg ctgcgcgcta tttccctgcg
     5161 gggcggcagc ggttgctaat tcgattcttg cttttgtcga acagggcgat catgtgttga
     5221 tgaccaacac tgcctatgaa ccgagtcagg atttctgtag caaaatcctc agcaaactgg
     5281 gcgtaacgac atcgtggttt gatccgctga ttggtgccga tatcgttaag catctgcagc
     5341 caaacactaa aatcgtgttt ctggaatcgc caggctccat caccatggaa gtccacgacg
     5401 ttccggcgat tgttgccgcc gtacgcagtg tggtgccgga tgccatcatt atgatcgaca
     5461 acacctgggc agccggtgtg ctgtttaagg cactggattt tggcatcgat gtttctattc
     5521 aagccgccac caaatatctg gttgggcatt cagatgcgat gattggcact gccgtgtgca
     5581 atgcccgttg ctgggagcag ctacgggaaa acgcctatct gatgggccag atggtcgatg
     5641 ccgataccgc ctatataacc agccgtggcc tgcgcacatt aggtgtgcgt ttgcgtcaac
     5701 atcatgaaag cagtctgaaa gtggctgaat ggctggcaga acatccgcaa gtagcgcgag
     5761 ttaaccaccc tgctctgcct ggcagtaaag gacacgaatt ctggaaacga gactttacag
     5821 gtagcagcgg gctgttttcc tttgtgctta agaaaaaact cagtaatgaa gagctggcga
     5881 actatctgga taacttcagt ttattcagca tggcctactc gtggggcggg tatgaatcgt
     5941 tgatcctggc gaatcaacca gaacatatcg ccgccattcg cccacaaggc gagatcgatt
     6001 ttagcgggac cttgattcgc ctgcatattg gtctggaaga tgtcgacgat ctgattgccg
     6061 atctggacgc cggttttgcg cgaattgtat aacattgcca cttttggaca attttgcaga
     6121 catttaattg tgaaaagtct taaattgttg cgtccgggat caaggcgtcc cggacgaatc
     6181 aggagtacaa taggcagata aaggcttaaa cgctgttcca caggaaagtc catggctgtt
     6241 attcaagata tcatcgctgc gctctggcaa cacgactttg ccgcgctggc ggatcctcat
     6301 attgttagcg ttgtttactt tgtcatgttt gccacgctgt ttttagaaaa cggcctgctg
     6361 cccgcctcat ttttgccagg cgacagcttg ttgatactgg caggcgcatt gattgcccag
     6421 ggggttatgg attttctgcc tacgattgcg attctgaccg ccgcagcaag tctgggctgc
     6481 tggctaagtt atattcaggg gcgctggtta gggaatacca aaacggtgaa aggctggctg
     6541 gcacagcttc ctgctaaata tcaccagcgc gccacctgca tgtttgaccg ccacggtctg
     6601 ctggcgctgc tggctggacg ttttcttgca tttgtccgta cgctgctgcc aaccatggcg
     6661 ggaatttccg gtctgccaaa ccgccgcttc cagtttttca actggttaag tggattgctg
     6721 tgggtcagcg tggtaaccag ttttggctat gccttaagta tgattccgtt cgttaaacgc
     6781 catgaagatc aggtaatgac gttcctgatg atcctgccaa ttgccttgtt aaccgctggc
     6841 ttgttaggca tgctgtttgt ggtgattaaa aaaaaatact gtaacgcctg acgattttcc
     6901 ccgttcccgg ctgctgtacc gggaacgtat ttaattcccc tgcatcgccc gcattcttgc
     6961 cgcatcttcc cccggcgtca caccgaagta acgtttaaac tcacggctaa attgcgatgc
     7021 gctttcatag ccgacgcgca tcgctgctgc gctggccttc atgccgtcat ggatgatcat
     7081 catccgcgcc ttatgcagac ggtaattctt caaatactgc aacggcgagg tgctggtgac
     7141 agacttaaaa ttatggtgga acgccgatac gctcatgttg gcttctgccg ccagttgctc
     7201 gacgctcagg ttttcggtgt atttattctc aatccgtttc agcacgcggc taatcagact
     7261 gaagtgagtc tggcgactga ccagcgccag taacgcgccg ccgcaaggtc cggtcagcac
     7321 gtagtacaga atttcgcgga tgatctgttt gccgagaata cgcgcatcca gtggtcgctc
     7381 catcacgtcg agtaaccgct ccgccgcgca taaaatctct tctgataacg tggcggagtt
     7441 aatcccgctg gctgccatcg acggctggaa atgctcatct tcgccaatgt ccatcaacag
     7501 ttcctgtaac tgcaaaatat cgacattgag acgcaaccct gccagcggca cctctgacgt
     7561 ggcataggtt tcgcactcaa acggcaacgg caccgtcagc agcaggtatt cattggcatc
     7621 ataacgaaac acgcgttcat tgatataacc gattttatgc ccggaaaaga gaattatgat
     7681 gccaggctcg tacatcaccg gtgtacgtgc gaaaggcgtc tcaccataca acaaacgcac
     7741 atcgggcaac agttctgaca aactattttc tttatttttc agtttattaa ctttatccgc
     7801 cagcaagcgg caaatctctt cacgtttcat atcgcgtaat ttcttaggaa taatgcggca
     7861 atttgattgt gcgcaatttt gtagcatttc tccagcactc tggagaaata ggcaagacat
     7921 tggcagaaat gagcattgag agccagggcg ctggcgatca caatgaaaaa catcaggcag
     7981 atcgttctct gccctcatat tggcccagca aagggagcaa gtaatgaaca actttaatct
     8041 gcacacccca acccgcattc tgtttggtaa aggcgcaatc gctggtttac gcgaacaaat
     8101 tcctcacgat gctcgcgtat tgattaccta cggtggcggc agcgtgaaaa aaaccggcgt
     8161 tctcgatcaa gttctggatg ccctgaaagg catggacgtg ctggaatttg gcggtattga
     8221 gccaaacccg gcttatgaaa cgctgatgaa cgccgtgaaa ctggttcgcg aacagaaagt
     8281 gactttcctg ctggcggttg gcggcggttc tgtactggac ggcaccaaat ttatcgccgc
     8341 agcggataac tatccggaaa atatcgatcc gtggcacatt ctgcaaacgg gcggtaaaga
     8401 gattaaaagc gccatcccga tgggctgtgt gctgacgctg ccagcaaccg gttcagaatc
     8461 caacgcaggc gcggtgatct cccgtaaaac cactggcgac aagcaggcgt tccattctgc
     8521 ccatgttcag ccggtatttg ccgtgctcga tccggtttat acctacaccc tgccgccgcg
     8581 tcaggtggct aacggcgtag tggacgcctt tgtacacacc gtggaacagt atgttaccaa
     8641 accggttgat gccaaaattc aggaccgttt cgcagaaggc attttgctga cgctgatcga
     8701 agatggtccg aaagccctga aagagccaga aaactacgat gtgcgcgcca acgtcatgtg
     8761 ggcggcgacg caggcgctga acggtttgat tggcgctggc gtaccgcagg actgggcaac
     8821 gcatatgctg ggccacgaac tgactgcgat gcacggtctg gatcacgcgc aaacactggc
     8881 tatcgtcctg cctgcactgt ggaatgaaaa acgcgatacc aagcgcgcta agctgctgca
     8941 atatgctgaa cgcgtctgga acatcactga aggttccgac gatgagcgta ttgacgccgc
     9001 gattgccgca acccgcaatt tctttgagca attaggcgtg ccgacccacc tctccgacta
     9061 cggtctggac ggcagctcca tcccggcttt gctgaaaaaa ctggaagagc acggcatgac
     9121 ccaactgggc gaaaatcatg acattacgtt ggatgtcagc cgccgtatat acgaagccgc
     9181 ccgctaagct ttttacgcct caaactttcg ttttcgggca tttcgtccag acttaagttc
     9241 acaacacctc accggagcct gctccggtga gttcatataa aggaggaacg tatggctaat
     9301 ccaaccgtta ttaagctaca ggatggcaat gtcatgcccc agctgggact gggcgtctgg
     9361 caagcaagta atgaggaagt aatcatcgcc attcaaaaag cgttagaagt gggttatcgc
     9421 tcgattgata ccgccgcggc ctacaagaac gaagaaggtg tcggcaaagc cctgaaaaat
     9481 gcctcagtca acagagaaga actgttcatc accactaagc tgtggaacga cgaccacaag
     9541 cgcccccgcg aagccctgct cgacagcctg aaaaaactcc agcttgatta tatcgacctc
     9601 tacttaatgc actggcccgt tcccgctatc gaccattatg tcgaagcatg gaaaggcatg
     9661 atcgaattgc aaaaagaggg attaatcaaa agcatcggcg tgtgcaactt ccagatccat
     9721 cacctgcaac gcctgattga tgaaactggc gtgacgcctg tgataaacca gatcgaactt
     9781 catccgctga tgcaacaacg ccagctacac gcctggaacg cgacacacaa aatccagacc
     9841 gaatcctgga gcccattagc gcaaggaggg aaaggcgttt tcgatcagaa agtcattcgc
     9901 gatctggcag ataaatacgg caaaaccccg gcgcagattg ttatccgctg gcatctggat
     9961 agcggcctgg tggtgatccc gaaatcggtc acaccttcac gtattgccga aaactttgat
    10021 gtctgggatt tccgtctcga caaagacgaa ctcggcgaaa ttgcaaaact cgatcagggc
    10081 aagcgtctcg gtcccgatcc tgaccagttc ggcggctaac atgcaaattc tcccggtggc
    10141 ggtaatgttc cgctaccgga cttttcagaa atcatttatt cccctcgcgt cccgcccgtt
    10201 gttactcttc cttgttcagg aatgccaaat ataaggacat catcatgcag agccggaagc
    10261 tcttaaaaga acaactcatc tatatccggg ataaacgcaa cggagaggtg aaaaacagat
    10321 gaaaataata cttctgtttt tagcagccct ggcaagtttt accgtacacg cgcagcctcc
    10381 ttcacagacc gtagaacaaa cagtccggca gatttatcag aactataaat cagatgccag
    10441 tacgccttat ttcggtgaaa ccggagagcg ggcgataact tcagcgcgta ttcaacaggc
    10501 gcttaccctg aacgacaatc ttacgctgcc gggcaatatt ggctggctgg attatgatcc
    10561 ggtttgtgat tgtcaggatt ttggcgatct ggtgctagaa agcgttgcga taacccaaac
    10621 tgacgccgat catgccgatg ccgttgtgcg ctttcgtatc tttaaagatg ataaagaaaa
    10681 gaccacgcag acactgaaaa tggtggcgga aaatggtcgt tgggtcattg acgatattgt
    10741 cagcaatcat ggcagtgtct tacaagcagt taatagcgag aatgaaaaaa cgctggccgc
    10801 tttagcttcg ttgcaaaaag aacagccgga agcctttgtt gccgaactct ttgaacatat
    10861 tgctgattat agctggccgt ggacgtgggt ggtttccgac tcttaccgcc aggcggttaa
    10921 tgccttctat aaaaccacct tcaagacggc caataatccc gatgaagata tgcaaataga
    10981 acggcaattt atttacgaca atccgatctg ttttggcgaa gagtcgctat tttcacgcgt
    11041 tgatgaaatt cgagtcctgg agaaaaccgc cgattccgcc cgcattcatg ttcgttttac
    11101 gctgaccaat ggcaacaacg aagagcaaga actggtttta cagcggcgcg aaggcaagtg
    11161 ggaaatcgct gattttatcc gcccgaacag cggcagccta cttaagcaga ttgaggcaaa
    11221 aactgccgcc agattaaagc aatgagctga attaaataac aattagccgg aacaataaat
    11281 aaaagggaac actatatgaa aacgattttc accgtgggag ctgttgttct ggcaacctgc
    11341 ttgctcagtg gctgcgtcaa tgagcaaaag gtcaatcagc tggcgagcaa tgtgcaaaca
    11401 ttaaatgcca aaatcgcccg gcttgagcag gatatgaaag cactacgccc acaaatctat
    11461 gctgccaaat ccgaagctaa cagagccaat acgcgtcttg atgcacagga ctattttgat
    11521 tgcctgcgct gcttgcgtat gtacgcagaa tgataaaaaa atccccggca gcatgtcagt
    11581 tgccgggtta taggctgttt gctaaaaaaa agccaaacat aaggacatga ttatgcgacg
    11641 ctggcacacc tgttttttta ttctgctgtt ctgtggcttc agcggaaacg tgttgtgcaa
    11701 agaatcgatt aatgaagcga tagaacgttt gtaccaacca ttgaccagta atgacgatat
    11761 accaataacc gatgaattca gtctcgattt gcgaagtaat atgagcgcta ctcctggcaa
    11821 aatgacaccc tggctgaata ataatctttt gtgtcgctgt gtcgatgacg ctttcgtttc
    11881 tgcagaaata atccaaagca cacacctaaa tggcggccga acgcatgtac tgttgcagct
    11941 ggttatcaaa caaaatcgca cagatatcca ccggttactg gggctaatgc tggttcgtga
    12001 aaatgataat catcgttggc taatagaaga catcgatgac
//
LOCUS       DAJVUK010000131        11974 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.131, whole genome shotgun sequence.
ACCESSION   DAJVUK010000131 DAJVUK010000000
VERSION     DAJVUK010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11974
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.131"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..314)
                     /gene="chbB"
                     /locus_tag="OQQ57_003250"
     CDS             complement(<1..314)
                     /gene="chbB"
                     /locus_tag="OQQ57_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HCS1957911.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
                     AAA"
     gene            complement(612..950)
                     /gene="osmE"
                     /locus_tag="OQQ57_003251"
     CDS             complement(612..950)
                     /gene="osmE"
                     /locus_tag="OQQ57_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HCS1957912.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            1152..1979
                     /gene="nadE"
                     /locus_tag="OQQ57_003252"
     CDS             1152..1979
                     /gene="nadE"
                     /locus_tag="OQQ57_003252"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HCS1957913.1"
                     /translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            2209..3096
                     /gene="cho"
                     /locus_tag="OQQ57_003253"
     CDS             2209..3096
                     /gene="cho"
                     /locus_tag="OQQ57_003253"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HCS1957914.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(3056..3631)
                     /gene="ves"
                     /locus_tag="OQQ57_003254"
     CDS             complement(3056..3631)
                     /gene="ves"
                     /locus_tag="OQQ57_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HCS1957915.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(3834..4304)
                     /gene="spy"
                     /locus_tag="OQQ57_003255"
     CDS             complement(3834..4304)
                     /gene="spy"
                     /locus_tag="OQQ57_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HCS1957916.1"
                     /translation="MRKLTALFVASTLALGAANLAHAAAPADAKPMMHHKGKFGPHQD
                     MMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIVSDTFDKAKAEAQIAK
                     MEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE"
     gene            complement(4634..5602)
                     /gene="astE"
                     /locus_tag="OQQ57_003256"
     CDS             complement(4634..5602)
                     /gene="astE"
                     /locus_tag="OQQ57_003256"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HCS1957917.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGDETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
     gene            complement(5595..6938)
                     /gene="astB"
                     /locus_tag="OQQ57_003257"
     CDS             complement(5595..6938)
                     /gene="astB"
                     /locus_tag="OQQ57_003257"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HCS1957918.1"
                     /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQ
                     GLLKMKTLADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS
                     ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFS
                     VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS
                     EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN
                     LRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY
                     LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN
                     ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG"
     gene            complement(6935..8413)
                     /gene="astD"
                     /locus_tag="OQQ57_003258"
     CDS             complement(6935..8413)
                     /gene="astD"
                     /locus_tag="OQQ57_003258"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HCS1957919.1"
                     /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACR
                     AARAAFPRWARLSLAERQVVVERFAGLLESNKAELTAIIARETGKLRWEAATEVTAMI
                     NKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
                     AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF
                     TGRANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR
                     CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW
                     QQLEAMGGRTLLAPRLLQLETSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEA
                     ILMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN
                     HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR"
     gene            complement(8410..9444)
                     /gene="astA"
                     /locus_tag="OQQ57_003259"
     CDS             complement(8410..9444)
                     /gene="astA"
                     /locus_tag="OQQ57_003259"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HCS1957920.1"
                     /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWHNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGDRVRL
                     VRLCAVEKTA"
     gene            complement(9441..10661)
                     /gene="astC"
                     /locus_tag="OQQ57_003260"
                     /pseudo
     CDS             complement(9441..10661)
                     /gene="astC"
                     /locus_tag="OQQ57_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
     gene            11107..11913
                     /gene="xthA"
                     /locus_tag="OQQ57_003261"
     CDS             11107..11913
                     /gene="xthA"
                     /locus_tag="OQQ57_003261"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HCS1957921.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
BASE COUNT         2934 a         3248 c         2965 g         2827 t
ORIGIN      
        1 gctgcggctt ttttaatcgc tgcaaccgca gccttaagca cgcctaaacc atcgactttg
       61 ccataaagca gcgagtcaat tacttcaacc ggtttgttgg gtaacaaacg ctggatttcg
      121 ggcaacatat aagcaatctg cggccctaat aacacgacat cggcattctg acctttttca
      181 ccagccagtg tttccggaaa tgcttcaata atgaccggaa cttcatattt ttctgcctgt
      241 gcgcgcattt ttgataccag taaagaggta gacatgcccg cagaacaaaa cagataaatg
      301 tgtttctttt ccataaaact gccctcatcg acgattatct gtcagccaga cactccgcaa
      361 gccttaacct gcttccatgc tctgggtaac ttgcgaaacc aacatgactt tttttgtggc
      421 tgaaaggagt atacggtata gacctgagca atagtatttc tttgacctta taaattgtct
      481 ctccttgacc tgcggttatg accctcttca catttcgggc aaataattcg cgaagataat
      541 taagaactca ggccaaaaaa accggcgcaa tggccggttt ccgttgttac tcaagctttc
      601 aaacgaagtg attacttcgc agcctgtgga tcagtgtcgt attcagcaca ggtctgataa
      661 ccggagttga tgacatgtcc ggtatcatct aacgcgacaa agtaggtttc tgctttacca
      721 tcacgttgac ccaggatgta ggtctggcaa gtaccacgag catggatcat gctcacttca
      781 gacgaaggtt tacccgcaat ttgtgcaacc tgcgcccggc tcatgccttt tttgacgtct
      841 ttcaccacag gctgtacaaa ctggtctttg gtacgatcat aagccgtaca acccgccagc
      901 atggttaata ccgccgctgc actcagaatt cctgccatat tcttgttcat attccgtcct
      961 cttgtttatc agcgtgttag ataagcctgg aatacattgg gcgctttttc aagcccgtga
     1021 acgaaacggc tccgctttca gaggattcct gtatgacgtt ttatccacca ttcaacccgc
     1081 tgtcgcttgt cgtttcagta gcgacgggtt agctttaagg aagttttgtc ttttctgtct
     1141 ggaggggttc aatgacattg caacaacaaa taataaaggc gctgggcgca aaaccgcaga
     1201 ttaatgctga agaggaaatt cgtcgtagtg tcgattttct gaaaagctac ctgcaaactt
     1261 atccgttcat taaatcactg gtgctcggga tcagcggcgg tcaggactcc acgcttgccg
     1321 gtaagctgtg ccagatggcg attaatgagc tgcgccagga gaccggcaac gaatcactgc
     1381 aatttattgc cgtacgcctg ccctatggtg ttcaggccga cgaacaagat tgccaggatg
     1441 ccattgcctt tattcaaccg gatcgcgtat taaccgttaa tatcaagggc gcggtattgg
     1501 ccagcgaaca ggcgctgcgc gaagcgggca ttgaactgag cgattttgtc cgtggcaatg
     1561 aaaaagcgcg tgagcggatg aaagcacaat atagcattgc gggtatgacc agcggtgtcg
     1621 tggtgggcac cgatcatgca gcagaagcta ttaccggatt cttcactaaa tatggtgacg
     1681 gcggtacgga cattaatccg ctgtatcgtc tcaacaaacg tcagggtaaa cagttactgg
     1741 cggcattagc ttgcccggaa cacctttata agaaagcgcc aacggccgat ctggaagatg
     1801 atcgcccttc tctgccagat gaagtggcac tcggcgtgac ctatgacaat atcgacgact
     1861 atctggaagg gaaaaacgta cctcaacagg tcgccagaac aatagagaac tggtatctga
     1921 aaaccgaaca taaacgccgt ccgccaatta ccgttttcga tgatttctgg aaaaagtaat
     1981 aatttgcaca tattggattg tgcgaaaaag agtaatttgt tcacgccgga tgcggcgtga
     2041 acgccttatt cgacctataa aactatgcaa attcaataca ttgcaggagt cgaataggcc
     2101 tgacaggcgt agcacgtcag acggtgtaac ctttgtcatc gacccgcctc ttttttaatc
     2161 gcttcccgcc tgttacactg gatagataac cagcattcgg agtcaacagt ggtacggcgt
     2221 ttaacttctc cgcggctcga atttgaagct gcggcaattt atgaatatcc cgaacattta
     2281 cgttcattcc ttaatgactt acccacccga ccaggggtgt atctgtttca tggtgaaagt
     2341 gacaccatgc cgctctatat cggcaaaagc gttaacatcc gcagccgcgt cctttctcat
     2401 ttacgtaccc cggatgaagc cgccatgcta cggcaatccc gacggatcag ctggatatgt
     2461 accgccggtg aaatcggcgc tctgctcctt gaagcgcgat taatcaaaga acaacagccg
     2521 ctgtttaata aacggttgcg ccgcaatcgt cagctctgtg ccctgcaatt aaatgaaaag
     2581 cgcgtcgatg tggtgtatgc caaagaggtg gatttttcac gagcccccaa cctgtttggc
     2641 ctgtttgcca ataggcgcgc agctttgcaa gcattgcaga ccatcgctga tgaacaaaaa
     2701 ctttgttatg gcctgctggg actggaaccg ttaagtcgcg gtcgtgcatg ttttcgttca
     2761 gcgctaaaac gttgcgccgg agcatgctgc ggtaaagaga gccatgagga acatgcgcta
     2821 cgcttgcgcc agtctctgga gcgtttgcgg gtggtgtgtt ggccttggca aggggcggtg
     2881 gcgctgaaag aacagcaccc ggaaatgact caatatcata ttattcaaaa ctggctgtgg
     2941 ctgggggcgg ttaattcgct ggaagacgcg acaacgttaa ttcggacacc cgccgggttt
     3001 gatcacgacg gttataaaat tctttgtaag ccgctgcttt ccggtaacta tgaaattact
     3061 gaacttgatc cggcgaatga ccagcgagcc agttgatttc actgaacaac agtttacctt
     3121 gcggttgtaa aagccgcagg gtgtgcctgc catcgaacca gcacgcgccc tggtcggtag
     3181 tgagcaattt atcgcccagt tgccacgccc cgttaatcac aaacaccacc ccgccgcgtg
     3241 agccaaaggt agtaaacgta cgttcggcaa ttctgacttt cgccttacag acatccaggc
     3301 gtgtcatgat gttgaaatcc atcgacatct gcccttccgt cagtttcgct tttaccacct
     3361 ggtccgctgc aaaggcaaaa ggctgtaacg gttttaaggt atggttaaag cggtctgcgc
     3421 tttcaaggag catctcgccg ccttccagca acgtcactat cctttccatg ccgggaaaca
     3481 aagaaaactc cccattcgcc gcgatggatg caatgctggc acgccagtaa aaatcacgtt
     3541 ttgccggtgg gaaagtgcaa atttcgcgcg tttcaccggc agcatttcgc cacagattca
     3601 ccgacatttt acgcatatca aagtattcca tactcgctcc cggcccgttc ttttcattgt
     3661 tatcgttcag gtaaccgtgg atggttatcg gcaactcggg tgatttacgt tagtggtgat
     3721 caggcttttt ttacaactgt ttgagaagag aaaagaaaac cgccgatcct gtccaccgca
     3781 ttactgcaag gtagtggaca agaccggcgg tcttaagttt tttggctgaa agattattca
     3841 gcagttgcag gcattttacc ttttgccgct ggacgttctg tcagacgctt ctcaaaatta
     3901 gcattaaatt gctttttctg ttccggcgtc aggatgttgt aaattttgtt ctgggtttcc
     3961 atgtgcgcca gcatgttagc tttgcgctgt tcttccattt ttgcgatctg cgcttcagct
     4021 tttgctttat cgaaggtatc gctgacaatg atgtcatgca ttgcgcggcg ttcttccagc
     4081 ggcggacgtt tcatctggtc acgctggcct ttcatgattt cgcggatctg ctgtttctgc
     4141 gcgtcggtca ggttcaggtc tttgaacatc atgtcctgat gcggaccgaa cttgcctttg
     4201 tggtgcatca tcggcttcgc gtcagccggt gctgcggcat gggccaggtt agccgcgcca
     4261 agagccaggg tagaggcaac aaacagtgca gttaatttac gcatattcta tatccttcct
     4321 ttcagttatt tattacggct ttcttaagta gcgtgccgtg ttgacaagat taactttact
     4381 gactttagcg tcaattaatc agagcaacgg taaaacaatg aaagtgtaaa aaacactttt
     4441 gcgccaatta tggagaaaaa aagaaaattt gatggagagt gatgagagaa tattacaaca
     4501 caatgatttt gcagagatta tgaagaacta tactggatga ctggtgataa ataaagcaaa
     4561 taaccaggat taatctgtat taatttataa gaaagcaact taatacccgc agaatgattt
     4621 ctgcgggtaa gtattagctt attttttcga gcattaatcc cgcgcgtaat cccaacgcta
     4681 ccaacggatt agggaataac acatactcta catcatgggt tacggtaaaa cgttcctctc
     4741 cgtcctgcgc cagcaatgtt cctttctcaa acggcataaa attcagcgtg tcacttgcca
     4801 tatgcatttc gaaggacggc gagtggcgag taatttgcga aaccacccga taacggagcg
     4861 gcggtgttct cacgataccg acactctcac cagatagcag cgcagcaatt gcgctggcag
     4921 ttactgcaaa ctggcgaaga tcgttttgcc caaagggcaa cgctttgcca agttccagcg
     4981 tacaggccag cgcgccaaaa tgtctggcgc tgaaatgggt aaacgtacca ccaggttcct
     5041 gatggaacac cagcgcctcc agccccgccg cacccagcca cgtcagaaat ttctcgtccc
     5101 agggaatgtc gcgttgcggt aatacaccga actgcggatg caaggagcca cgaattgcgg
     5161 tatgtagatc aaggtgccag cgcacagatt ctttgccctg gtcataaaaa tcttccaggc
     5221 actgttccag ttcgcgcgcc cgacaggttt ctccgctttc agcaaatagc tgccaacgac
     5281 cgccaaacat tcgattcata tcgctatggc aataacgttt cccttgcttc agcgcaggag
     5341 gattcccgag gatcaccagc aaccgccaac gtaacgggat ctcgccgtga gatatcgcgc
     5401 caagcaacgc gtccagcatt tccacaggtg ccgtctcatc accgtggatc cccgcagaaa
     5461 tcaccagcgc gccttgcggt ggcgttaatg gcgtcagttc cagcacacca tcgcccagcc
     5521 agcgccagcg aacgccgttg atttctcgct cggtgataac cggtttttta cccgttaagg
     5581 tcagagcaag aaaattatcc attgccccct ccctcgcgct ggaacggata aaccgaaccg
     5641 agattcagta attggctcaa tacatccagt gcttcccgcc cttcgcgcag caattgcggg
     5701 tcggccagat cggcagcagt aagacgatcg cggtagtaac gatccaccca gtcattgagc
     5761 gcattaaaca aggtatcgtt catcatcacc gccggattca ccgcccggcg ttcttcttct
     5821 gtcaatacca cccgcaaccg caggcacgcc gggccgccgc cattcgccat gctttcacgt
     5881 aagtcaaaga cttttagttc gctaatcggg ttgtcagcgg caaggagttc attgagataa
     5941 ccccatactc cggcgtgttc ccgacactcc tgaggcagca ccaacatcat ggaaccatca
     6001 tcgcggctca acagttggct gttaaacaga taggtagaca ccgcatccga cacggaaacc
     6061 tgagttgccg gaacttctat cgccataaaa ccgttcaccc gcgcccgcag gtttgccagt
     6121 aactgtgact ggcgagcgaa cgcctgttgg tggcaaaaca gcacctggcg gttacttacg
     6181 gcaatcacgt cattatgaaa aacaccctgg tcgataacgt ccgggttttg ctgggcgaaa
     6241 atcacctgtt ggggattcac ctgattaagc cttgccaccg cctcgctggc ttcgcgagtc
     6301 tgtcgcgccg gataacggga aggccgggta tcattgcctt cttctcgccc gtagacaaaa
     6361 agttgcatac ccggctcacc gtaatgaccg ccgagacgat tgtggtttgc cgccccctca
     6421 tcaccgagca acgctacctg cggcaacgcc gaatggacgc taaatttctc ttcgtcgtta
     6481 aaaatagctt ttaacagcga ttcagtgacg ggcgcttcca gcgaacggtg aaatttattg
     6541 ttcaggttgg caacggtgag atgcactttg ccatccagcg tatcggcaga tggcgcgatc
     6601 gttgccgcat tggctaccca cattggcgaa gcggagctga cgctggaaag ccagtgcggt
     6661 gcctggcgtg caactttttc cagtacctgc tcatcgctac cactgaatcc caactgacgc
     6721 agcaccggaa taaacggacg ctcgtgcggc gggatcacgg cctgggggaa tcctgcatcg
     6781 gcaagggttt tcattttcag taagccctgt ttcgccgcca gtcgcgggtt agacacctga
     6841 aaacggtgac gggtagaggc ttcattacca aacgacaggc cagcgtaatg atgcgtcagc
     6901 cctaccagcc cgtcgaaatt aacttcccag gcgttcatcg caccacctca tcggaaaaat
     6961 ccagcccggg gttaagcgtt gcgggcaaag ttaacgagtc cgactccagg ctcgccatag
     7021 gccatgcgca gtaatctgcg gcataccagg cgctggggcg atggttaccg gatgcaccaa
     7081 tgccgccgaa tggcgcggta ctggcagcac cagtaagcgg tttgttccag ttaacaatcc
     7141 ccgcccgcgc ctccagcaac agttgatcga atttttcccg ttcgggggaa accagaccgc
     7201 aagagagtcc gaagcgagtg ttattcgcca ttagaatcgc ttcctcgaaa gaatcataac
     7261 gccagacgcg caataacggt ccgaacacct cttcatctgg tacgccagca acgcctgtca
     7321 tttcaatgat ccccggcgtc agcaacgatg tctctaattg taataagcgc ggcgcaagca
     7381 gggttcgtcc gcccatcgct tccagttgct gccaggcagt aaccacctgc tgtgcggcct
     7441 gttcagaaat cagcccgcca ataaacggct gcggttcgtc atcccagttg cccggcgtta
     7501 atcgctggct gacggcaacc agacgagcaa gaaacgcatc gccctgcgct ccgcttttga
     7561 gcaataaacg gcgggcgcag gtgcagcgtt gcccggctgt gacaaacgcc gactgaatgg
     7621 tcagatggac agccgcgtcg atatccgcca cctcatcgat aattagcgga ttattaccgc
     7681 ccatctcaag ggcgagaatt ttctccggct gaccggagag ctggcgatgc agctggtagc
     7741 cggtattggc gcgaccggta aacagcaaac cgtcgagatc ctccagcgca ctcagcgcct
     7801 gacccgtttc acgcccgccc tgcaccaggt tcagcacgcc cggcggcaag ccagcctgct
     7861 gccataaacg cattaccgct tcgccactcc acggtgtcag ttcgctgggt ttaaagataa
     7921 tggtgttacc tgccagcaat gccggaacga tatgtccgtt cggcaaatga ccagggaaat
     7981 tatacggccc aaacaccgcc agcacgccgt gcgggcgatg tcgcaggctc gccgcaccgt
     8041 ccggcatttc actacgctgc tcgccggtac gaacgtgata cgccttaatt gatatcgcga
     8101 ttttattgat catcgccgtc acttcggttg ccgcttccca gcgcagctta cccgtttctc
     8161 tggcaataat cgcggttaat tcggctttat tgctttccag caatccggca aagcgttcga
     8221 caacgacctg acgttcagcc aatgagagcc gcgcccagcg cggaaacgcc gcacgggctg
     8281 cccgacaagc ctgttcgacc tgagcggcat cggcatcatt gccttgccat aacacctcgc
     8341 ccgataccgg attacgcttc acacgcgatg cgccctggcc cgttatccag tcaccgttaa
     8401 tccataaagt catgctgttt tctccactgc gcacaggcgc accagacgaa cgcgatcccc
     8461 tgcgtggcat ttgagggcat ccagttgtgc ggcggttaaa atcaaacgct cggttgccgg
     8521 atcggtacgc gccagcacca cgcggaaatg gtgataattt tcattggcga ccaggcaggc
     8581 cggaaaatcg ccctgcgcag gctgcccttc tgccacttcc accagccgac ttttacggat
     8641 ggcgcgcacg cggtcgatgt cacactcaag cgttggcccg ccgtcgaaga tgtcgatata
     8701 gttgcggtaa cgaaaacctt ctttctccag caccgcgcgg gcaggcgcgg tttgcggatg
     8761 tacctgaccg atgacgtcct gggcttcctg ggataaaaag tgggtataga tcggatgttt
     8821 cggcatcagt tctgcaataa atgccttttg cccggtgccg cagagaaaat cggcgcggct
     8881 aaaatccatc gaaaagaagc gtttaccgag gctttgccag aacggtgaat agccgtgttc
     8941 gtcaatcacc ccgcgcattt cagcaaccac tttgtcatta aacttgtcgc gaaaagccgc
     9001 cataaacata aagcgcgatt tcgacagcaa atagccgttg ccctctttgc gccagtccgg
     9061 gtcgagaaac agcgtgcaca gctcgctgct gccggtgtga tcgttactaa gaaacagcgt
     9121 cggcaatgcg ttatagacat tcagctcttt tgaggcgtga accaacgtgc cgacccgata
     9181 gttgtgccag ggatcgttca gcccaaccgc cacctcaatg gcgcaaatcc ccgccacggt
     9241 gcctgtctcg ctatcttcca gcacgaacac atagccctgc tcgcttttgg gcagttcgcc
     9301 ttgccaggtt ttgattgccc tttcgatacg cgcggaaagc gtggcttcat tagcgggaag
     9361 cgacgtcagg ccgccgcccg ttttgctggc aagctgcatc agcgccgaga catctgagcg
     9421 ctcaacggga cggatgacca tcatgatgaa cctcggctaa caaaatgttc gcaagcagct
     9481 gcaaagcgat ccagtccggt cgtcacctct tcttcgctga cattgagcgc aggcgcaaaa
     9541 cgcaccacgt tgccacccgc aatcagtacc ataacgcctg ctttcgccgc ctcctgagag
     9601 atctgtttcg cttgtccggc gtaatcggca ttcagtacac agccaatcaa caaacctaag
     9661 ccgcgaactt cactgaacaa accgtagcgg tgattaatgg tattaagacg ctcaacaaac
     9721 cagtcgtgac gctgtttaac gccattaagc atctctggtg tgttgatgag ctccagcact
     9781 ttgcccgcca ccgccgaggc cagcggattg ccgccatagg tggtgccatg agtgccaacg
     9841 gtcatcacgc tggcgcactc ttcggttgtt aacaacgcac cgaccgggaa atcgccgccc
     9901 agcgctttgg cggtagttaa cagatcaggt gtcacgccgt agtgcatata ggcatacagt
     9961 tccccggtgc gcccgacgcc ggtttgtact tcatcaaaaa tcaacagcgc attgtggcgg
    10021 tcacacaatt cacgcagacc ttgtaaaaac gcgttgctgg ctggcaccac accgccttcc
    10081 ccctggatgg gttagacaat caccgcacag gtggcgtcgt caatcagcgc gctggcagag
    10141 ttaatatcgt tatatgcagc atgacggata tctggtggca gtggcgcaaa atcctgtgaa
    10201 taggctggct gcccacccgc actgacagta aacagcgtgc gaccatgaaa cgcattttta
    10261 aacgccatga taccgctctt atggctgccg tagcggtcgt gagcgaattt acgcgccagt
    10321 tttagcgccg cttcgttggc ttccgcaccg gagttacaaa agaagacgcg atcggcaaac
    10381 gtggcgtcga tcaatttttt cgccagtcgc agtaccggct cgttggtgta accgttgccg
    10441 gtatgccaga acttactcgc ctgttcgttc agcgcttcac gcagttccgg atgcgcatgg
    10501 cccagcgcgt tcaccgcaat gccacccgcg aagtcgatat actctttccc ctgctgatcc
    10561 cacaagcgcg aaccttcgcc acgtaccggt ataaagggtg ccggagcgta aacaggtatc
    10621 atccattcat caaagttttc acgcgtaatt ggctgagaca tagcgacctc tacagtaaat
    10681 aattcgttat ttatatgtta acaataagta atgtttgcgc tgtaaatgta gattgcaggg
    10741 ttcgtgccag ccagtgataa aagtgcataa acggcggagg ctaactggaa atcaaggagt
    10801 tataaccaaa ccatatgcat ttaaagtgca tataaagtga atacgtttgc gatgtgggtg
    10861 aataaaaaga ataaaaaacg caatgttatg cagaagtaaa atataattct ggaattgtga
    10921 tcattgacga aatttactgg aaattactgc gccattctga cgcagcgcgc accaaaagcg
    10981 ggcatttttt gcgccatcgt tgacatcatt aacaaccatc gatcaaatca cttaacaaca
    11041 ggcggtaagc aacgcgaaat tctgctacca tccacgcact ctttatctga ataaatggca
    11101 gcgactatga aatttgtctc ttttaatatc aacggcctgc gcgccagacc tcaccagctt
    11161 gaagccatcg tcgaaaagca ccaaccggat gtgattggcc tgcaggagac aaaagttcat
    11221 gacgatatgt ttccgctcga agaggtggcg aagctcggct acaacgtgtt ttatcacggg
    11281 cagaaaggcc attatggcgt ggcgctgctg accaaagaga cgccgattgc cgtgcgtcgc
    11341 ggctttcccg gtgacgacga agaggcgcag cggcggatta ttatggcgga aatcccctca
    11401 ctgctgggta atgtcaccgt gatcaacggt tacttcccgc agggtgaaag ccgcgaccat
    11461 ccgataaaat tcccggcaaa agcgcagttt tatcagaatc tgcaaaacta cctggaaacc
    11521 gaactcaaac gtgataatcc ggtactgatt atgggcgata tgaatatcag ccctacagat
    11581 ctggatatcg gcattggcga agaaaaccgt aagcgctggc tgcgtaccgg taaatgctct
    11641 ttcctgccgg aagagcgcga atggatggac aggctgatga gctgggggtt ggtcgatacc
    11701 ttccgccatg ctaatccgca aacagcagat cgtttctcat ggtttgatta ccgctcaaaa
    11761 ggttttgacg ataaccgtgg tctgcgcatc gacctgctgc tcgccagcca accgctggca
    11821 gaatgttgcg tagaaaccgg catcgactat gaaattcgca gcatggaaaa accgtccgat
    11881 cacgcccccg tctgggcgac cttccgccgc taatttagca gctctcctgg ctcaaactgg
    11941 gtcaggagaa ttaaccttga gaaaaatcaa caaa
//
LOCUS       DAJVUK010000132        11883 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.132, whole genome shotgun sequence.
ACCESSION   DAJVUK010000132 DAJVUK010000000
VERSION     DAJVUK010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11883
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.132"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(36..350)
                     /locus_tag="OQQ57_003262"
                     /pseudo
     CDS             complement(36..350)
                     /locus_tag="OQQ57_003262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
     gene            complement(465..863)
                     /locus_tag="OQQ57_003263"
     CDS             complement(465..863)
                     /locus_tag="OQQ57_003263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HCS1957922.1"
                     /translation="MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGL
                     GAILSTWLSNQQSNQSVSGEQLESAPGTNAVSDLGQKLGVDTSTASSLLAEQLPKIID
                     ALSPQGEVSSQANNDLLSAGMELLKGKLFR"
     gene            complement(1103..3517)
                     /gene="gyrB"
                     /locus_tag="OQQ57_003264"
     CDS             complement(1103..3517)
                     /gene="gyrB"
                     /locus_tag="OQQ57_003264"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HCS1957923.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADLLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(3546..4619)
                     /gene="recF"
                     /locus_tag="OQQ57_003265"
     CDS             complement(3546..4619)
                     /gene="recF"
                     /locus_tag="OQQ57_003265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HCS1957924.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWACFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLVEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(4619..5719)
                     /gene="dnaN"
                     /locus_tag="OQQ57_003266"
     CDS             complement(4619..5719)
                     /gene="dnaN"
                     /locus_tag="OQQ57_003266"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HCS1957925.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(5724..7127)
                     /gene="dnaA"
                     /locus_tag="OQQ57_003267"
     CDS             complement(5724..7127)
                     /gene="dnaA"
                     /locus_tag="OQQ57_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HCS1957926.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            7424..7504
                     /locus_tag="OQQ57_003268"
     CDS             7424..7504
                     /locus_tag="OQQ57_003268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957927.1"
                     /translation="MTIDKNWLNRSNKDPGRSLRFTHQPV"
     gene            7734..7874
                     /gene="rpmH"
                     /locus_tag="OQQ57_003269"
     CDS             7734..7874
                     /gene="rpmH"
                     /locus_tag="OQQ57_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HCS1957928.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            7891..8250
                     /gene="rnpA"
                     /locus_tag="OQQ57_003270"
     CDS             7891..8250
                     /gene="rnpA"
                     /locus_tag="OQQ57_003270"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HCS1957929.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            8214..8471
                     /gene="yidD"
                     /locus_tag="OQQ57_003271"
     CDS             8214..8471
                     /gene="yidD"
                     /locus_tag="OQQ57_003271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HCS1957930.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            8474..10120
                     /gene="yidC"
                     /locus_tag="OQQ57_003272"
     CDS             8474..10120
                     /gene="yidC"
                     /locus_tag="OQQ57_003272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HCS1957931.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            10226..11590
                     /gene="mnmE"
                     /locus_tag="OQQ57_003273"
     CDS             10226..11590
                     /gene="mnmE"
                     /locus_tag="OQQ57_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HCS1957932.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            11833..>11883
                     /gene="tnaC"
                     /locus_tag="OQQ57_003274"
     CDS             11833..>11883
                     /gene="tnaC"
                     /locus_tag="OQQ57_003274"
                     /inference="COORDINATES: protein motif:HMM:NF019665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase leader peptide"
                     /protein_id="HCS1957933.1"
                     /translation="MNILHICVTSKWFNIDN"
BASE COUNT         2718 a         3254 c         3068 g         2843 t
ORIGIN      
        1 caggggtatc gcttagtttt tcaatttcct atacgtgaac cgacttcgcg agagagtttt
       61 tccaggaaac gatagtcgtc ataactgaga gcagtttgcg ccacggtgct accatcagcg
      121 gccttctgta ccagcgcgcc gttataagta atgcagtagt cgcccggctg ttccatatgc
      181 agctctttca ggtagttgtg aacgcctgca taagggcgac ccgtcgttag cacgacattc
      241 acgccacggg cgcgagctgc ggcaatcgca tttttaacgg cgggtgaaat ggtgtgatcg
      301 ggcagcagaa gggtgccatc catatcgata gcaatgagtt tgatagccat gagttcccca
      361 ggtagattag ttcctgaccc atgctaacgc gattccgctc aaaaatcagt acaacacccg
      421 agggaaaagg gggatgcaac gcgggttgca tgctccccat ttgcttagcg gaagagtttc
      481 cctttcagca gttccatacc tgcggaaagc agatcgttat tggcttgtga agacacttca
      541 ccttgcggtg agagcgcatc aataatcttc ggcaattgtt ctgccagtaa actggaagcc
      601 gtactggtat ccacgccaag tttttgcccg agatcggaca ccgcatttgt gccgggcgcc
      661 gattccagtt gctcgccgct aactgattga ttgctctgct gattactcaa ccaggttgag
      721 agaatggccc ctaagccgcc actttgcagt ttttccagca gcacctgaat gccgccctgc
      781 tcctcaaccc aacttaaaat agcctgatat ttccccgcat cgcctttcag aaaggcaccg
      841 acaacttcat caaaaagccc catgataatc acctgtaaag cgttacgtgt tgacccaaaa
      901 agtatagatc tgcgggatga taattgcgga ttgcagaaat aaaaagggcg gagatgatct
      961 ccgccctttt tttatagctt cttgccggat gcggcgttaa cgtcttacct ggcctacaaa
     1021 atcattaaaa ttcaatacat tgcaagattt tcgtaggcct gataagcgta gcgcatcagg
     1081 cacgctcgca tggttaacgc cattaaatat caatattcgc cgctttcagg gcgttctctt
     1141 caataaacgc acgacgcggt tctacggcgt cgcccatcag cgtggtgaac aacaggtcag
     1201 cggcaatcgc atccttaacg gtaacgcgca gcatacgacg actttccggg tccatggtgg
     1261 tttcccacag ctgttccggg ttcatctcgc ccagaccttt ataacgctgg atggagagac
     1321 cgcgacgaga ctctttcacc agccagtcca gcgcctgctc gaagctggct accggctgac
     1381 gacgctcgcc acgttcgata aatgcatctt cttccagcaa gccacgcagt ttctcaccca
     1441 gcgtgcagat acgacgatat tcgccaccag tgataaattc gtgatccagc ggatagtcag
     1501 tatccacacc gtgggtacgc acgcgaacaa tcggctcgaa caggttttgt tcggcattgg
     1561 tgtggacatc aaacttccac tggctgccgt gctgttcttt gtcgttcagt tcgctgacca
     1621 gcgcgttcac ccagcgggta acggtctgct catcagagag gtcggcttcc gtcagcgtcg
     1681 gctgatagat aagctctttc agcattgctt tcggataacg acgctccatg cggttgatca
     1741 ttttctgcgt cgcgttgtac tcagacacca gtttctctaa cgcttcgcca gccaatgccg
     1801 gtgcgctggc gttggtgtgc agcgttgcgc cgtccagcgc gatagagatc tggtactgat
     1861 ccatcgcttc gtcgtcttta atgtactgtt cctgcttgcc tttcttcact ttgtacagcg
     1921 gcggctgagc gatgtagacg tgaccgcgtt caacgatttc cggcatctga cgatagaaga
     1981 aggtcaacag cagcgtacga atgtgcgagc cgtcgacgtc cgcatcggtc atgatgatga
     2041 tgctgtgata acgcagtttg tccgggttgt actcgtcacg accgatacca cagccaagcg
     2101 cggtgataag cgtcgccact tcctgagaag agagcatctt atcgaagcgc gctttctcaa
     2161 cgttgaggat tttacccttc agcggcagaa tcgcctggtt cttgcggtta cgcccctgct
     2221 tcgcagagcc gcccgcggag tccccttcca ccaggtacag ttcggaaagc gccggatcgc
     2281 gttcctggca gtctgccagt ttgcccggca ggcccgctaa gtcgagcgca cctttacggc
     2341 gggtcatttc acgcgcgcga cgcgccgctt cacgggcacg ggcagcatcg ataattttgc
     2401 caaccacgat tttcgcgtcg gttgggtttt ccagcaggta ttctgccagc agttcgttca
     2461 tctgctgttc aaccgccgat ttcacctcag aagaaaccag tttgtctttg gtctgggagg
     2521 agaatttcgg gtccggcact tttacggaaa cgaccgcaat caggccttca cgcgcatcgt
     2581 caccggtggc gctgactttg gcttttttgc tgtagccttc tttgtccatg taggcgttca
     2641 gggtacgggt catcgccgca cggaagcctg ccaggtgagt accgccgtca cgctgcggaa
     2701 tgttgttggt aaagcagtag atgttttcct ggaagccatc gttccactgc aacgccactt
     2761 cgacgccaat accgtctttt tcggtggaga agtagaagat attcggatgg atcggcgttt
     2821 tgttcttgtt cagatattca acgaacgcct tgatgccgcc ttcatagtgg aagtggtctt
     2881 ctttgccgtc acgcttgtcg cgcagacgaa tggaaacgcc ggagttgagg aacgacaact
     2941 cacgcagacg tttcgccaga atttcatatt cgaactcggt cacattggtg aaggtttcga
     3001 ggctgggcca gaaacgcacc atggtgccgg ttttttcagt ctcgccggta accgccagcg
     3061 gagcctgcgg tacaccgtgt tcgtagatct gacggtgaat tttaccctcg cgctggataa
     3121 ccagctccag tttttgcgac agggcgttta ctaccgaaac accaacgccg tgcagaccgc
     3181 cggacacttt ataggagtta tcgtcaaatt taccgcctgc gtgcagaacg gtcatgatca
     3241 cttccgccgc cgatacgccc tcttccgggt gaataccggt cggaatgccg cgcccgtcat
     3301 cctgtacaga gacagagtta tcggcgtgaa tggtgacgat aatttcttta cagtgacccg
     3361 cgagcgcttc gtcgatagcg ttatctacca cctcgaatac catgtggtgc agaccggtgc
     3421 cgtcatccgt gtcgccgata tacatacccg ggcgcttacg caccgcatcc agccctttca
     3481 ggactttgat actggaggag tcataagaat tcgacatcaa cgtttctcgc tcatttatac
     3541 ttgggttaat ccgttatttt acccttttcc acggtaaaca tcttcgaatt ttcgtccgac
     3601 atgtctataa cgtgttcagc actgatcgcg ctgacaaaga cctgtgattg cgtcgctttt
     3661 aagcggctgg caagcagccc gcgacgctca tcatcaagct cagaggcaaa atcatctatc
     3721 aggtagagac accgccgccc gctttcacgg gtgaggaact ctccttgcgc cagacgtaag
     3781 gcgcacatca acagcttaag ctgcccacgc gataaggtat cttccaccgg cgcaccgtcg
     3841 gcgcgaatgc gtaagtccgc tttatgcggg ccatgcgcgg tgtaggttag ctggcgatcg
     3901 cgttcaaaat tacgttccag cacctcagca tattctgtct ctttctccca gccgcgctgg
     3961 aaagagaaag tcagagaaaa ctcagggaga aattgcttac aagtatcggc catatcagcc
     4021 gcgataccgg cgctatactc cgcgcgccag gtgctgattt gctccaccag cgggatcagc
     4081 tctttatccc acgggcgtag ctgttcgtaa cgtgtcacct ggcgcagcgc cgcattgcgc
     4141 tgcttgagca atcgcttgag attgctccag gcggtgaaaa atccgggttc gttgtgaaag
     4201 catgcccagt cgagaaatgc tcttctgtat ttggggccgc cgttgagtaa agtaaaccct
     4261 tctggcgtta tcagctgcat cggcatcagg tgcgccagct ccgcgacttt atgcccgtca
     4321 gtaccgtcga tgcggacttt gctgtcgcct tgtttgtctt tggttaagcc aatcgccgtc
     4381 tcgcgctctt cgccctgtaa tcgcccatgg agaacaaatg cctcctgctc atggcgaatg
     4441 acgcgaccaa tctgcaaact gcgaaacgcc cgaccatggc cgagcgtata gatggcttcc
     4501 agcacactgg ttttgccact gccgttggca cctaccagaa agttaaagcc gggagataag
     4561 gcgagatccg cggtttcgat attgcggaaa tcgcggatca acaagcgggt gagggacatt
     4621 acagtctcat tggcatgaca acataagccg cgctctggct ggccgcatct tcaatctgca
     4681 cgctggaaac cgaatcggtc agcatcatgc ggacgttttc gcatttcagc gcgttcagaa
     4741 catccagcac atagctgacg ttgaagccga tttccatctc cgcaccgcta taggtaacgt
     4801 cgaggatctc ttccgcttct tcctgttccg ggttgttggc agtgattttc agctggtttt
     4861 cgctgacata aagacgtacg ccgcggaatt tctcgttaga gagaattgcc gcacgggcaa
     4921 acgcctgctt gagcagatcg cagccagctt ccagatgttt gtccgggttc ttcggtagaa
     4981 cgcggcggta atccgggaag cgaccatcca ccagtttgga ggtgaagata aagtcgccaa
     5041 cgtgggcacg aatgttattg ctgccaatct gcacgcgcag cggattgtcg ccgccgtcga
     5101 gcatacgcat cagttcaatc acgcctttac gcggcacgat caccgaatgg cttggcaaag
     5161 attgaccaat tggcattgaa cagactgcca gacggtgacc atcggtcgct acggtgcgca
     5221 gttcttcgcc ttcggtttca aacagcatac cgtttaagta atagcgaaca tcctgatgcg
     5281 ccatcgaaaa ctgggtcgct tcaatcagac gcttcatcgt cgcctgcggc agggtaaatt
     5341 cgacttcgct ctgccagtca tcgaggttcg ggaaatccgc cgctggcagg gtagacagcg
     5401 aaaaacggct acgcccggag cgcaccagca tccgttcacc ttccagctgc acggcaattt
     5461 ccgcgccttc aggcagacca cggcagatat caaagaattt gcgcgccgga acggtcgttg
     5521 ctcctggctc gtgtggctga accagcgcaa cacgtgccac catttccatc tcgagatcag
     5581 taccggtcag cgacaacgta ccgtcagcaa cctgtaacag cagattaccg agaatcggta
     5641 gcgtaggacg accacctaac ggaccgctca cctgttgtag cggttttaat aaatgctcac
     5701 gttctacggt aaatttcata ggtttacgat gacaatgttc tgattaaatt tgaaaaatct
     5761 tctttgatat cgtggctctc ttcacgcaac tgctcgatct tacggcaggc atgaagcacc
     5821 gtcgtgtggt cacgaccacc aaacgcatcg ccaatctccg gcagactgtg gttagtcagc
     5881 tctttcgcca gcgccatcgc catctggcgc ggacgcgcca ccgagcggga tcgacgcttg
     5941 gaaaggagat ccgcgacttt gatcttgtag tactccgcca ccgtcttctg aatattgtcg
     6001 atggtgacca gtttttcctg caatgccagc aagtcgcgca gcgcctcacg cacgaagtcg
     6061 atggtgatcg cccgtccggt aaagttggca ttggcaatga cgcggttcag cgccccttcc
     6121 agctcacgta cgttagatcg tagacgcttg gcgataaaga acgccacttc gcccggcaaa
     6181 cgaatgtcgt tttcgtcggc ctttttcatc aggatcgcca cacgggtttc cagctctggc
     6241 ggttcgatcg ccacagtcag tccccaaccg aagcgggatt tcaaacgatc ctcaacgccg
     6301 ttgatctctt tcggatagcg atccgaggtg agaatgatct gttgattacc ttccagcagg
     6361 gcgttgaagg tatggaaaaa ctcttcctga gatcgttctt tattagcaaa aaactgaata
     6421 tcgtcgatca gcagtgcatc tacggaacgg tagtagcgtt taaactcttc gatcgcgttg
     6481 ttttgcaggg ctttaaccat gtcctgaaca aagcgctcgg agtgcatata aaccactttg
     6541 gcattcggct tgcgcgccat aatgccgtta cccaccgcat gcagcaggtg agttttaccc
     6601 agacccgtgc cgccataaag gaacaacggg ttataggcac cgccagggtt atccgccacc
     6661 tggcgagccg ccgcgcgcgc cagttggtta gatttacctt caacgaagtt atcaaacgtg
     6721 tgtttgacgt ttacgttaga acgataggtc ggttctgccg gggccgggac gttatcccaa
     6781 cctgagcgcg tagaaggcgc agcacgttgc ggctgcgttt gcgccacctg tgcaggggcc
     6841 gcgacgttgc tcgtcactgc cgcttgtggc gtttgcgtca ccggtttggt gccgacttca
     6901 aaacgcagct gtggggcatc cgctccgcag aaactggtta gcagtccatt gatattatta
     6961 aggtacttgt cccgtaccca atcgaggaca aaacggtttg gcgcgtacag ggccagcgtg
     7021 ttatcgctca gttccgcctg caatgggcgt atccacatac tgaattctgt ggctggtaac
     7081 tcatcctgca atcgggcaag acactgctgc caaagcgaaa gtgacacggc ggactccact
     7141 cgaacaaaag tcgataatga ctaaggctga aacattcatg attgttgacg tacgtcgaaa
     7201 agaccctgct tgagggtgac gcacgaaccg ctgtctgcgg ttatatgccc gatcaagatc
     7261 ctgcaaaacg atcgggaccg cggatcatag cctaaactgc gcaagagatc ttctgtttct
     7321 cacagatttt cccgatttat ccacaggact ttccagaact cgctaagtgt aaacgatcct
     7381 gccgcgaggc gggcacgatt tacgccgcat attgaaaaat ttaatgacca tagacaaaaa
     7441 ttggcttaat cgatctaata aagatccagg acgatccttg cgctttaccc atcagcccgt
     7501 ataatcctcc acccggcgcg ccatgctggt ttccactggt gtgaggtcgt acattttccc
     7561 tgcgaaaagg tgcggaaaag cgcggtaaat aaggaaagag aattgactcc ggagtgtaca
     7621 attattacaa tccggcctct ttaatcaccc atggcttcgg tgtccatcgt ttcatttttc
     7681 ggcggatatc caataaagcc attgaattta ttcaagttta ggtagaaatc gccatgaaac
     7741 gcacttttca accgtctgta ctgaagcgca accgttctca cggcttccgt gctcgtatgg
     7801 ctactaaaaa tggtcgtcag gttctggcac gtcgtcgtgc taaaggccgc gctcgtctga
     7861 ccgtttctaa gtaataaagc taacccctga gtggttaagc tcgcatttcc cagggagtta
     7921 cgcttgttaa ctcccagtca attcacattc gtcttccagc agccacaacg ggctggcacg
     7981 ccgcaaatta ccattctcgg ccgcctgaat tcgctggggc atccccgtat cggtcttaca
     8041 gtcgccaaga aaaacgttcg acgcgcccat gaacgcaatc ggattaaacg tctgacgcgt
     8101 gaaagcttcc gtctgcgcca acatgaactc ccggctatgg atttcgtggt ggtggcgaaa
     8161 aaaggggttg ccgacctcga taaccgtgct ctctcggaag cgttggaaaa attatggcgc
     8221 cgccactgtc gcctggctcg cgggtcctga tagccctcat tcgggtctat caacgcctga
     8281 ttagtccgct actcgggccg cattgtcgtt tcactccaac ctgttcaagc tacggaattg
     8341 aggcattgcg caggtttgga gtgataaaag gcagttggtt gacggtgaaa cgcgtattaa
     8401 aatgccaccc tttacaccct ggtggtgacg atcccgtccc gcccggacca tttgatacca
     8461 gagaacacta acgatggatt cgcaacgcaa tcttttagtc atcgctttgc tgttcgtgtc
     8521 tttcatgatc tggcaagcct gggagcagga taaaaacccg caacctcagg cccaacagac
     8581 cacgcagaca acgaccaccg cagcgggtag cgccgccgac cagggcgtac cggccagtgg
     8641 ccaggggaaa ctgatctcgg ttaagaccga cgtgcttgat ctgaccatca acacccgtgg
     8701 tggtgatgtt gagcaagctc tgctgcctgc ttacccgaaa gagctgaact ctacccagcc
     8761 gttccagctg ctggaaactt caccgcagtt tatttatcag gcacagagcg gtctgaccgg
     8821 tcgtgatggc ccggataacc cggctaacgg cccgcgtccg ctgtataacg ttgaaaaaga
     8881 cgcttatgtg ctggctgaag gtcaaaacga actgcaggtg ccgatgacgt ataccgacgc
     8941 ggcaggcaac acgtttacca aaacgtttgt cctgaaacgt ggtgattacg ctgtcaacgt
     9001 caactacaac gtgcagaacg ctggcgagaa accgctggaa atctccacct ttggtcagtt
     9061 gaagcaatcc atcactctgc caccgcatct cgataccgga agcagcaact tcgcactgca
     9121 caccttccgc ggcgcggcgt actccacgcc tgacgagaag tacgagaaat acaagttcga
     9181 taccattgcc gataacgaaa acctgaacat ctcttcgaaa ggtggttggg tggcaatgct
     9241 gcaacagtat ttcgcgacgg cgtggatccc gcataacgac ggtaccaaca acttctatac
     9301 cgctaatctg ggtaacggca tcgccgctat cggctataaa tctcagccgg tactggttca
     9361 gcctggtcag actggcgcga tgaacagcac cctgtgggtt ggcccggaaa tccaggacaa
     9421 aatggcagct gttgctccgc acctggatct gaccgttgat tacggttggt tgtggttcat
     9481 ctctcagccg ctgttcaaac tgctgaaatg gatccatagc tttgtgggta actggggctt
     9541 ctccattatc atcatcacct ttatcgttcg tggcatcatg tacccgctga ccaaaacgca
     9601 gtacacctcc atggcgaaga tgcgtatgct gcagccgaag attcaggcaa tgcgtgagcg
     9661 tctgggcgat gacaaacagc gtatcagcca ggaaatgatg gcgctgtaca aagctgagaa
     9721 ggttaacccg ctgggcggct gcttcccgct gctgatccag atgccaatct tcctggcgtt
     9781 gtactacatg ctgatgggtt ccgttgaact gcgtcaggca ccgtttgcac tgtggatcca
     9841 cgacctgtcg gcacaggacc cgtactacat cctgccgatc ctgatgggcg taacgatgtt
     9901 cttcattcag aagatgtcgc cgaccacagt gaccgacccg atgcagcaga agatcatgac
     9961 ctttatgccg gtcatcttca ccgtgttctt cctgtggttc ccgtcaggtc tggtgctgta
    10021 ctatatcgtc agcaacctgg taaccattat tcagcagcag ctgatttacc gtggtctgga
    10081 aaaacgtggc ctgcatagcc gcgagaagaa aaaatcctga ttcggtgagt tttcgctaaa
    10141 ataagggcgg tcagttgacc gccttttttc ttttcgtagg gcggataagc accgcgcatc
    10201 cgccacacaa agcaacagga acatcatgag cgataatgac actatcgtag cccaggccac
    10261 gcctccggga cgtggcggcg ttggcatcct gcgcatctcc ggcttcaaag cccgtgaagt
    10321 tgccgaaacc gtgctgggta aactgcctaa gccgcgctac gccgattatc ttccgtttaa
    10381 agacgccgac ggcagcgtgc tcgatcaggg gattgcgcta tggttccctg gcccgaactc
    10441 gttcaccggc gaagatgtgc tggaactgca aggtcatggc ggtccggtga tcctcgacct
    10501 gctgttaaaa cgcattctga ccattcccgg cctgcggatt gctcgccctg gtgagttttc
    10561 cgaacgcgcg tttcttaacg ataaacttga cttagcccag gccgaggcga ttgccgatct
    10621 tatcgacgcc agttcggaac aggcggcccg ttcggcactt aactcgctgc aaggcgcatt
    10681 ctccgcacgg gttaatcatc tggtagaagc cctcacccac ttgcgcattt acgtcgaagc
    10741 ggcaattgat ttccccgatg aagagatcga tttcctctcc gacggaaaaa ttgaagccca
    10801 gctcaatgac gttattgccg atcttgatgc agtgcgtgct gaagcacgtc agggtagttt
    10861 gttgcgcgaa gggatgaaag tggtgattgc cggacgtcct aacgccggta aatcgagcct
    10921 gttaaacgcg ctggcggggc gtgaagcggc aatcgtaacc gatatcgccg gaactacgcg
    10981 tgacgtgctg cgtgagcata tccacattga cggaatgccg ctgcatatca tcgataccgc
    11041 cgggctacgt gaagccagtg acgaagtaga acgtattggt atcgagcgcg cgtggcagga
    11101 aattgaacag gccgaccgcg tgctgtttat ggtcgatggc accacaacag acgccgtgga
    11161 tccggcagag atctggccgg aatttattgc ccgtctgcca gcgaaactgc cgatcaccgt
    11221 ggtgcgcaat aaagccgata tcaccggcga aacgctggga atgagtgaag tgaacggtca
    11281 cgcgttaatt cgtctctcgg caaggactgg tgaaggcgtg gacgtgctgc gtaaccatct
    11341 caaacagagc atgggctttg acaccaacat ggaaggcggc ttcctggcgc gtcgtcgcca
    11401 cctacaggcg ctggaacagg cagcggaaca tctacaacag ggcaaagcgc aactgttggg
    11461 agcctgggca ggtgaactgc tggcggaaga gttgcgtctg gcacagcaga acttaagcga
    11521 aatcaccggg gaatttactt cagacgacct gctggggcgg attttctcca gcttctgtat
    11581 tggtaagtaa ccgcgcttac gaagccgtat tctgactgtc agatgcggct tcgcttcatt
    11641 gttagcactc ctgttattcc tcaacccttt ttttaaacat taaaattctt acgtaattta
    11701 taatcttaaa aaaagcattt aatattgctc cccgaacgat tgtgattcga ttcacattta
    11761 aacaatttta gaatagacaa aattcttgag tattatactg tagcctcgtg tctttcgagg
    11821 aataagtgca ttatgaatat cttacatata tgtgtgacct caaaatggtt caatatcgac
    11881 aat
//
LOCUS       DAJVUK010000133        11796 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.133, whole genome shotgun sequence.
ACCESSION   DAJVUK010000133 DAJVUK010000000
VERSION     DAJVUK010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11796
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.133"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            488..1144
                     /gene="pphA"
                     /locus_tag="OQQ57_003275"
     CDS             488..1144
                     /gene="pphA"
                     /locus_tag="OQQ57_003275"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HCS1957934.1"
                     /translation="MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPW
                     RDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGD
                     WFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQ
                     VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ
                     "
     gene            complement(1145..1336)
                     /locus_tag="OQQ57_003276"
     CDS             complement(1145..1336)
                     /locus_tag="OQQ57_003276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HCS1957935.1"
                     /translation="MFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRQGGCF
                     PIEDFIDGFWRPAQEYGDF"
     gene            complement(1441..1677)
                     /locus_tag="OQQ57_003277"
     CDS             complement(1441..1677)
                     /locus_tag="OQQ57_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HCS1957936.1"
                     /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW
                     DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            complement(1795..3234)
                     /gene="rsmF"
                     /locus_tag="OQQ57_003278"
     CDS             complement(1795..3234)
                     /gene="rsmF"
                     /locus_tag="OQQ57_003278"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HCS1957937.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAAGVGLNWDENLRLWQRDKELWLFPVDIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALATPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            complement(3314..5947)
                     /gene="yebT"
                     /locus_tag="OQQ57_003279"
     CDS             complement(3314..5947)
                     /gene="yebT"
                     /locus_tag="OQQ57_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HCS1957938.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVSGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            complement(5916..7199)
                     /gene="yebS"
                     /locus_tag="OQQ57_003280"
     CDS             complement(5916..7199)
                     /gene="yebS"
                     /locus_tag="OQQ57_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HCS1957939.1"
                     /translation="MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            7329..7826
                     /gene="msrC"
                     /locus_tag="OQQ57_003281"
     CDS             7329..7826
                     /gene="msrC"
                     /locus_tag="OQQ57_003281"
                     /EC_number="1.8.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine (R)-S-oxide reductase"
                     /protein_id="HCS1957940.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            7923..8621
                     /gene="proQ"
                     /locus_tag="OQQ57_003282"
     CDS             7923..8621
                     /gene="proQ"
                     /locus_tag="OQQ57_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HCS1957941.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            8641..10689
                     /gene="prc"
                     /locus_tag="OQQ57_003283"
     CDS             8641..10689
                     /gene="prc"
                     /locus_tag="OQQ57_003283"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HCS1957942.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLAGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FGPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            10881..11762
                     /gene="htpX"
                     /locus_tag="OQQ57_003284"
     CDS             10881..11762
                     /gene="htpX"
                     /locus_tag="OQQ57_003284"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HCS1957943.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
BASE COUNT         3032 a         2905 c         3045 g         2814 t
ORIGIN      
        1 tcgcaacccc aaatcgtaaa ggaaaccgta gcacgtcgta tgcaagaacg tgccacggct
       61 ggctgatgga tgttcgatag cgcgagtttg aatgaaaatc agccggagat gattttacat
      121 aattgctacg gaattattca atacaggaat tgcttgcgtc tgcatggatt gacctgaaat
      181 tttcccgaaa atttctctaa aaaactcgaa aaaaatggta actggttgaa tgtattaata
      241 tgcaatggta cgtgtcaggg attaaaagat gaacgtaaat ttattcaacg cattaatttt
      301 aaagggtttt attgtttgtt gacgaaaaca ggaatcgtgt tcggtctctt tttatctgtt
      361 aaaagccaga agcatttcct tcgctgactt tatagtcaac cataacacac actctactgt
      421 ctgagtccag cgttttttaa cattcttgtt aagattatgt gatctttagc acgggaggaa
      481 aatattgatg aaacagcctg cgcccgttta tcagagaatt gcgggtcatc aatggcgaca
      541 tatctggctt tctggcgata tacacggttg tcttgagcag ttgcgccgca aattatggca
      601 ttgtcgtttt gatccgtggc gagatttact tatctcagtg ggagacgtta tcgatcgtgg
      661 gccgcaaagt ttacgttgtc tgcagttact ggaacaacat tgggtttgtg cggtaagagg
      721 caatcatgaa cagatggcga tggatgcgct ggcatcccag cagatgtctt tgtggttgat
      781 gaatggcggc gactggttta ttgcgctggc agataatcaa cagaaacaag cgaaaacggc
      841 gctggaaaaa tgtcagcatt tgccctttat tcttgaagta cacagtcgca ccggcaagca
      901 tgttattgct catgcggatt atccagatga tgtttatgaa tggcaaaagg acgttgattt
      961 gcatcaggtc ttgtggagcc gctcgcgatt aggtgaacgc caaaaagggc agggaattac
     1021 aggtgctgat catttctggt ttggtcatac accgttgcga catcgcgtgg atattggcaa
     1081 cctgcattat attgataccg gtgctgtctt tgggggcgaa ctgactcttg tgcaattgca
     1141 atgattaaaa atcaccgtac tcctgtgcag gtcgccagaa accatctata aaatcctcaa
     1201 tcggaaaaca accgccctgg cggatccgtt gatcgctcat agaataaaga cactgctgtt
     1261 ccgtgttgta gacatccaca acaatatctt cacaaccgcc atccaggtag caaacaaaaa
     1321 gtaccagcgc gaacatttca tccccgaagt gtggtgccgt accgttaagt ttaggagaga
     1381 ttttacaacg ggggaataac caggacaaat aacccgccat gccgacgggt tctttttgga
     1441 tcaggcaaga cgcataatcc aggcatcaga ttgttgatcg taacgggtac ggtaaaggac
     1501 agagtgttcg ccatttagca gggcagggat actggtttca gcatcccagg catcgagttg
     1561 catacataaa tcggggtcag atttacaagg aatggttaac gttcgatcac ccggcgattc
     1621 accgtgtaat tcgccgtcgt cgatttcaaa agcgcctatg cgcacactgg ttttcatctt
     1681 cgtgctctcc atttagctgc cggttgtggt acgaccagtc cgatcgcacc atttttcagc
     1741 ctagttgagg cagccgaatg tgccagtcaa aaagtgcgct ttttttgtgc gctgtcaggc
     1801 gttaccggta aaaagtttcc catcgcgcac cagttcacgc ggatagctgt ttttcaatcg
     1861 cgaaccaatc cgtttggcta aaccaatcgg ttgatgctgg aaagtaacca acacgtcatc
     1921 cgccactggc gcggcttgcg ggtaaacatc gcgcccgcga taccactcct ccgcttcctg
     1981 cggtgtcagt tcaaaagcgt tcacattgtc gggggtggca agggcaataa ctgcttcatg
     2041 ctgccagcga taacctttgt tgtgcgtttc ggcaagttta atccccaagc gagaaaatcg
     2101 gactttaccg atcagggctt caatgtccac cgggaacaac cacagttctt tgtcacgctg
     2161 ccagaggcgc aggttttcat cccagtttaa gccaacacct gcagccgcct ggcgaatttg
     2221 tccagcttcg cgatctttca ccgggctgaa cggaaaatta ccgactttgt atttgggggc
     2281 gggtaaggcg ggaatcgcct gagttttacg cagacgagca acgaagaagc cttcgcagtc
     2341 gtaaatttgt gggaaaacat gcaaaaagcc ttcttcggtc agcgctttgt ttgcaccagg
     2401 gaagagatcg ccaagtggta aaaactctac tgcgtcgggg taagtctctt tcagccacag
     2461 gcaaacggct tcgttttctt cctggtttaa ggtacaggtc gagtaaacca gcgtaccacc
     2521 aggacgtaat gcatgaaagg cgctgtcgat aagctcccgt tgtgtagctg cgatttcctg
     2581 attgctttct ggtgaccagt tttttagcgc atcgggatct ttacgcacca cgccttcgcc
     2641 ggagcaggga gcgtccagca aaatggcatc aaacatttct ggcactgccg caccaaacac
     2701 gcggccatca aaatgtgtga gcgcaacatt actgatgcca cagcggctga tattggcatg
     2761 taacactttt acccgactgg cggaaaactc attggcaagg attgcccctt cgttattcat
     2821 ccgcgcggca atttgcgtcg tttttgagcc tggcgcagca gcgacatcca tcacccgctg
     2881 tggtgcatta ccgtcagcaa acaaggcggc gacgggcaac attgaactgg cttcctgaat
     2941 ataaaacagg ccacttaaat gctcggcggt actacccaat ggcaatgcat cttcattgtc
     3001 gcgttcaatc cagaaacctt cttcacacca cggaattggc gtaagcgtcc agccataagg
     3061 agcggttaat tgcaggaaat cagcaacgga gattttcagc gtattaacgc gaatgctgcg
     3121 gcgcaacggg cgctgacagg cggcaagaaa atcatcaaat gagagcgtcg aaggcatagc
     3181 ttcgcgcatt tgtgtcagaa acgcgtccgg gaaataaacg gtgtgttggg ccacgagcat
     3241 gtaccactgg caaaaaaaca ggcgcgcagt ttagcataaa cgctccggcg caggcacgcc
     3301 ggagcagtgg gcattatttg ggaagcgcag ttccccattc acgccactct ttcggttcac
     3361 tttcctgcaa caggaagtgt ttgccttcct gggctttcgg tgccagtggc gtacccggag
     3421 gcgtggcgaa ggcgatgccg ccacggataa actggttaaa ggtgccggtt ttcactacgc
     3481 cgcccgtcag accaaagtcc agactgtaac ccgatgccaa ccagaagacg gaattgttac
     3541 gcaccaggtg ttgatagcgt ttactgatgc gcatcgcaat catcacgcga tctgacaatg
     3601 tccccagcgt cattccggta accgtaccta cttccagacc acggaacagc acaggcgtac
     3661 caatacctaa cgaaccggct tccggtgctt cgacaataat gcttaagcca tccaggtaac
     3721 gcgaatcagt aatagtagct tcttgcaact caaagtcacg gcgaggatta ccccgacctg
     3781 gttcgacatt gatatacggc tggaggatag tatctagatg ctcaacgccc gtggctgaaa
     3841 tttgcggtgt gaccaccgag aagcgcgtac cgccgcgggc gaaggtctgg acatactccg
     3901 gatagagcac cgcctttgcc tgtacttcat tgcgcgcggt aatcagatcc agcgtctgga
     3961 tttgcccgat atcaataccg agatagcgaa ttggcatccc gaccgccagt tttccggcat
     4021 cgaaagcgtg aagcgtaatc tgcccactaa ccgcacgggc cgctgtttcg gaagcataca
     4081 gaattcgttt gtcgccttta cgctgactgg cgctggcacc gctgaggtta tcgaagctaa
     4141 tggctccctt taatgctctg gagagcgggg atgcctgtac ggtcaggcca ctaccattca
     4201 gctgaacttt cgccccgcct tctgcccaga acacgctatt gctggtcaga aggttgcgat
     4261 actccggctt aatatgcaga tcgatatcaa acgcgttagc tcgcggacgc acggtaatca
     4321 cttcaccaac ttcaaattta cggtacagca ctaccgatcc tgcctgcaca tccggcagcg
     4381 tctctgcact caaactcacg gttgtggtgg gtaaatcgct aaggctgttc tccagcgctt
     4441 tttccagatt ggcatacagt ggatagctgg ctttcatctc acctttatcg cctggcagaa
     4501 tacgtatccc gccgttaatc cattctgagg cgctggcacc aagaaactca acgccatcca
     4561 gccccacctt cacgtcgaca cggctgttga cgacaaattt gctatcgcct tttaccagtt
     4621 cgcgatgctg aggctcgatg gcgacggtaa aggtaacgcc tttgctggtg agtttacgat
     4681 caataacctg gcctacctgc acgccgtgaa gaatgagcgg ctgacccgta tcaataccgt
     4741 aactttccgg cgcggtcagg gtcagcgtca gaacatcagg ttcatgcagc agtgcttttt
     4801 cgcctggcac aacaacgaac tctttgcgtg gctcgccatc gccgggtacc aactcgaagg
     4861 ttttgccagt cagcagggcg ctgagattgg catcgctaag ggataatttc ggattacgta
     4921 attcgatgcg ggtattttca cgaagcaggg taacgacgct gggatcaact gtcatttccc
     4981 cagtgacttt accaccagga tttaaatcca gtttagttag ctgtccgact tccagtccct
     5041 gatacattaa tggcgtcgag tcggcggtta atccggcccc actcggcagt tccagtttga
     5101 ttattacgcc acgctggcta tgggcgaggt cttcatacag accaaaggta tcttccgcct
     5161 cggcaggttt cgactcttct ggtgaatcga aggcaatcgc accgttaacc agtgccgcca
     5221 ggctttccag tttcaccttc gcgccactga tactgacatt ggcatcaacg ccggaaacgt
     5281 tccagaaacg gctacctttt ttcaccagat cggtaaaacg ccgctcgatc aggacatcaa
     5341 tcaccacgcc ttgtttgttg ggattgatgg catagtcgta gacttttccc accgggatct
     5401 tgcggaaata gaccaatgaa ccgctgttca gcgaaccgag atcgggggct tgcaggtgga
     5461 tcatcagatc gccattgttc agccgatatt tcggttgggt atcgagtgcg acaaagtgat
     5521 cctgctcttt acctgtaccc ggcatcatgc cgatatagtt cccaccgacg agggcgtcca
     5581 gcccggagac acctgccaac gatgcttttg gcgtcaccag ccagaattga gtctcttcgc
     5641 gcagcgcatc tttcatatcg gacttgatgc tgaccttgac ttcaatctta cgaagatcgt
     5701 cgctgaggct gatatcctgc actgttccga cttcaacgcc ctgataacga acaggcgtac
     5761 ggcccgggac aataccatcc gccgacataa agtcgatggt gacggtatta cttcggtcct
     5821 gataactgtc ccaaatcagc caaccggcaa tcattagcgc gatgaaaggc agcagccaga
     5881 aaggtgagat acggcgttta tttttaatct gcgcttcagt cgtcgaagcg ggcgtttcct
     5941 gactcatgtg catcccaaag taagcggctg tccagccatt ccacagcaag aatagtcaaa
     6001 attacggctg cgccaaaata aaacgcagcc ggtcccatag taaaagcgag gatctgatcg
     6061 cgattaatca gcgacatggt taaagatatg acaaacaggt cgagcatcga ccagcgtcca
     6121 atccaggtca ccatccgcag taacagaatg cgtgtgcgta aaccttgctg gcatttaaaa
     6181 tgaatgctca acagtaaagt gaacatgacg atcactttag taaacggtac cagaatactg
     6241 gcgataaaca cgattccggc gaccgcaatg ttgctacttg ccagcgacat aatcccggaa
     6301 agaatcgtat cttcctgccg gccaccattc agataaatga tagaaatagg caataggttg
     6361 gctggtaaca acaaaacgat tgacgctaac agcgccgccc agcatttttg caaactatga
     6421 cgacgacgca ggcgtagcgg gatatggcaa cgcgggcagc gaccacgctg atcaggatag
     6481 ccggtaaaat ggcacccaag acagacacga agtttctcgt ccctacgcgt agcggggcgc
     6541 tgcggataat atcgctccca cagctcctca acattaagat gtgacaacgt caccgtcgtt
     6601 aaaatcacca acgccacaaa agagaacaag ccgacacccg cctggatatg ggcataatcc
     6661 tgtaccttta tagaagcaac gccaatgccg accaggtaga tatccagcat tacccactct
     6721 ttaagacgct caagcatcag cagtaccgga cgtaaattca ttcccagtcg gttaccaaac
     6781 cataaatatg ctatggagga caccagaatg aggggggcac caataacgca gaaaaagacc
     6841 atcgcccccg ttatcgtatc gccctgtttg gtcatttgcc agatgccttg catgacgttt
     6901 gcgtcgatac gaatacctaa cagccagata tgcaacagtg gttcgcccca ggcaaacggc
     6961 atcagcaaca gcatggtgaa agccattgcc gccaggcgcg ttagcgacca gtcgcgcccg
     7021 tcgcgaattt ttgcctgaca gcgcggacaa taggcactct gatgagaatt tatctcgggc
     7081 aggctaaaca gcatgtcaca ttgcgggcaa cgttggtaat caccacgcgg cagttcctcg
     7141 ccgattgacc tcactgttat cttttttgtc ggcgtaattt gtggtgtgtt aagagccatg
     7201 acgtgccaaa tgtaataaga attaacatta atcttaaccc atgatgggaa tgatcttgag
     7261 cattaacgca tttaatgctt attttaatag gctggcagtt ccaggtaaga caaacaagtg
     7321 attatataat gaacaaaaca gaattttacg cggatttaaa tcgcgacttt aacgcgctga
     7381 tggcgggaga aaccagtttt ctggcaacgc ttgcgaacac cagtgcgttg ttatacgagc
     7441 gtctcactga cgtaaactgg gcaggttttt atttgcttga ggacgataca ctggtactcg
     7501 gaccatttca gggcaaaatt gcctgtgtcc ggatacccgt cgggcgcggg gtgtgcggca
     7561 ctgcggttgc ccgcaatcaa gtgcagcgta tcgaggatgt tcacgcgttt gacgggcata
     7621 ttgcctgtga tgcggcgagt aattctgaaa ttgttctgcc gctggtggtg aaaaatcaga
     7681 ttattggtgt tcttgacatc gatagtaccg tcttcggtcg ctttacagac gaggacgagc
     7741 aaggcttacg tcagcttgtg gcacagcttg aaaaagtgct tgcaacgacg gattacaaaa
     7801 aattctttgc gagcgtcgca ggataatcaa cggataacgt agcatttact ggtagcgtca
     7861 ttataatgac gcctgttcat gcctgcgctt gttggctacg tccgttgtaa tcaggaaatt
     7921 tcatggaaaa tcaacctaag ttgaatagca gtaaagaagt aatcgcgttt ctggccgaac
     7981 gttttcccca ctgtttcagt gcggaaggtg aagcgcgtcc gctgaaaatc ggtatttttc
     8041 aggatttggt cgatcgtgtt gccggggaaa tgaacctgag caaaacgcaa ttacgatccg
     8101 ctttacgtct ctacacttcg agctggcgtt atctttacgg tgttaaaccc ggcgcaacgc
     8161 gtgtcgatct tgacggcaac ccatgcggtg agctggacga gcaacatgta gagcatgctc
     8221 gcaagcagct tgaagaagcg aaagcgcgtg ttcaggcaca gcgtgctgaa cagcaggcga
     8281 aaaaacgcga agctgccgca gctgctggtg agaaagaaga cgcaccgcgc cgcgaacgca
     8341 agccacgtcc gaccacgcca cgccgcaaag aaggcgctga acgtaaacct cgtgcgcaaa
     8401 agccggtaga gaaagcgcca aaaacagtaa aagcacctcg cgaagaacag cacaccccgg
     8461 tttctgacat ttcagctctg actgtcggac aagctctgaa ggtgaaagcg ggtcaaaacg
     8521 cgatggatgc caccgtatta gaaatcacca aagacggcgt ccgcgtccag ctgaattcgg
     8581 gtatgtcttt gattgtgcgc gcagaacacc tggtgttctg aaacggaggc cgggccaggc
     8641 atgaacatgt tttttaggct taccgcgtta gctggcctgc ttgcaatagc aggccagacc
     8701 ttcgctgtag aagatatcac gcgtgctgat caaattccgg tattaaagga agagacgcag
     8761 catgcgacgg taagtgagcg cgtaacgtcg cgcttcaccc gttctcatta tcgccagttc
     8821 gacctcgatc aggcattttc ggccaaaatc tttgaccgct acctgaatct gctcgattac
     8881 agccacaacg tgctgctggc aagcgatgtt gaacagttcg cgaaaaagaa aaccgagtta
     8941 ggcgatgaac tgcgttcagg caaactcgac gttttctacg atctctacaa tctggcgcaa
     9001 aagcgccgtt ttgagcgtta ccagtacgct ttgtcggtac tggaaaagcc gatggatttc
     9061 accggcaacg acacttataa ccttgaccgc agcaaagcgc cctggccgaa aaacgaggct
     9121 gagttgaacg cgctgtggga cagtaaagtc aaattcgacg agttaagcct gaagctggca
     9181 ggaaaaacgg ataaagaaat tcgtgaaacc ctgacacgcc gctacaaatt tgccattcgt
     9241 cgtctggcgc aaaccaacag cgaagatgtt ttctcgctgg caatgacggc gtttgcgcgt
     9301 gaaatcgacc cgcataccaa ctatctttcc ccgcgtaata ccgaacagtt caacactgaa
     9361 atgagtttgt cgctggaagg tattggcgca gtgctgcaaa tggatgatga ctacaccgtt
     9421 atcaattcga tggtggcagg tggtccggca gcgaagagta aagctatcag cgttggtgac
     9481 aaaattgtcg gtgttggtca aacaggcaag ccgatggttg acgtgattgg ctggcgtctt
     9541 gatgatgtgg ttgccttaat taaagggccg aagggcagta aagttcgtct ggaaatttta
     9601 cctgctggta aagggaccaa gacccgcact gtaacattga cccgtgaacg tattcgtctc
     9661 gaagaccgcg cggttaaaat gtcggtgaag accgtcggta aagagaaagt cggcgtgctg
     9721 gatattccgg gcttctatgt gggtttgaca gacgatgtca aagttcaact gcagaaactg
     9781 gaaaaacaga atgtcagcag tgtgatcatc gacctgcgta gcaatggcgg tggggcgttg
     9841 actgaagcgg tatcgctctc aggtctgttt attcctgcgg gtcccattgt tcaggtccgc
     9901 gataacaacg gcaaggttcg tgaagacagc gataccgacg ggcaggtgtt ctataaaggc
     9961 ccgctggtgg tactggttga ccgtttcagt gcttcggctt cagaaatctt tgccgcggca
    10021 atgcaggatt acggtcgtgc gctggttgtg ggtgaaccga cgtttggtaa aggcaccgtt
    10081 cagcaatacc gttcattgaa ccgtatttac gatcagatgt tacgtcctga atggccagcg
    10141 ctgggttctg tgcagtacac gatccagaaa ttctatcgcg ttaacggcgg cagtacgcaa
    10201 cgtaaaggcg taacgccaga catcatcatg ccgacgggta atgaagaaac ggaaacgggt
    10261 gagaaattcg aagataacgc gctgccgtgg gatagcattg atgccgcgac ttatgtgaaa
    10321 tcaggcgatt taacggcctt tgggccggag ctgctgaagg aacataatgc gcgtatcgcg
    10381 aaagatcctg agttccagaa catcatgaag gatatcgcgc gcttcaacgc tatgaaggac
    10441 aagcgcaata tcgtttctct gaactacgct gtgcgtgaga aagagaataa tgaagatgat
    10501 gcgacgcgtc tggcgcgttt gaacgaacgc tttaaacgcg aaggtaaacc ggagttgaag
    10561 aagctggatg atctaccgaa agattaccaa gagccggatc cttatctgga tgagacggtg
    10621 aatatcgcac tcgatctggc gaagcttgaa aaagccagac ccgcggaaca acccgctccc
    10681 gtcaagtaat atcaatcagg cacaagaaat tgtgcctgat tttttaacag cggcaagatg
    10741 ccgtaaatca gatgctacaa aatgtaaagt tgtgtctttc tggtgactta cgcactatcc
    10801 agacttgaaa atagtcgcgt aacccatacg atgtgggtat cgcatattgc gttttgttaa
    10861 actgaggtaa aaagaaaatt atgatgcgaa tcgcgctctt cctgctaacg aacctggccg
    10921 taatggtcgt tttcgggctg gtactgagcc tgacagggat acagtcgagc agcgttcagg
    10981 ggctgatgat catggccttg ctgttcggtt ttggtggttc cttcgtttcg cttctgatgt
    11041 ccaaatggat ggcattacga tctgttggcg gggaagtgat cgagcaaccg cgtaacgaaa
    11101 gggaacgttg gctggtcaat actgtagcaa cccaggctcg tcaggcaggg atcgctatgc
    11161 cgcaagtggc tatctaccat gcgccggaca tcaacgcttt tgcaaccggt gcgcgccgtg
    11221 atgcctctct ggttgctgtc agcaccggtt tgctgcagaa catgagcccg gatgaagccg
    11281 aggcggtaat tgctcacgaa atcagccaca tcgccaatgg tgatatggtc accatgacgc
    11341 tgattcaggg cgtggtgaac accttcgtta tctttatttc ccgtattctg gcgcagcttg
    11401 ccgcgggttt tatgggcgga aatcgtgatg aaggtgaaga gagcaacggc aacccgctga
    11461 tctactttgc ggttgcaacg gttctggaac tggtgtttgg tattctggcg agcattatca
    11521 ccatgtggtt ctcgcgtcat cgtgaattcc atgctgatgc cggttcggca aaactggttg
    11581 gtcgcgagaa aatgattgcc gcgctgcagc gcctgaaaac cagctatgaa ccgcaagaag
    11641 caaccagcat gatggctttc tgcattaatg gtaagtcgaa atcgctcagt gagttgttca
    11701 tgactcaccc gccgctggat aaacgaattg aagctctgcg tacgggtgaa tacctgaagt
    11761 aatatgaagt aaatactaaa aagtgcgtcc tgatcg
//
LOCUS       DAJVUK010000134        11785 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.134, whole genome shotgun sequence.
ACCESSION   DAJVUK010000134 DAJVUK010000000
VERSION     DAJVUK010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11785
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.134"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            29..1414
                     /locus_tag="OQQ57_003285"
     CDS             29..1414
                     /locus_tag="OQQ57_003285"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000398460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HCS1957944.1"
                     /translation="MEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNHEA
                     IDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ
                     GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTRYKEKVKYWMTFNEIN
                     NQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFN
                     IGCMIAMYPIYPLTCVPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLD
                     ITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQ
                     IDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKK
                     AVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWY
                     RDLIANNGENI"
     gene            complement(1471..1689)
                     /gene="marB"
                     /locus_tag="OQQ57_003286"
     CDS             complement(1471..1689)
                     /gene="marB"
                     /locus_tag="OQQ57_003286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HCS1957945.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYNQHAM"
     gene            complement(1721..2104)
                     /gene="marA"
                     /locus_tag="OQQ57_003287"
     CDS             complement(1721..2104)
                     /gene="marA"
                     /locus_tag="OQQ57_003287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HCS1957946.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            complement(2124..2558)
                     /gene="marR"
                     /locus_tag="OQQ57_003288"
     CDS             complement(2124..2558)
                     /gene="marR"
                     /locus_tag="OQQ57_003288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HCS1957947.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     SGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP"
     gene            2770..3435
                     /gene="marC"
                     /locus_tag="OQQ57_003289"
     CDS             2770..3435
                     /gene="marC"
                     /locus_tag="OQQ57_003289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HCS1957948.1"
                     /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TYH"
     gene            complement(3460..4650)
                     /gene="ydeA"
                     /locus_tag="OQQ57_003290"
     CDS             complement(3460..4650)
                     /gene="ydeA"
                     /locus_tag="OQQ57_003290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HCS1957949.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(4800..5914)
                     /gene="yneK"
                     /locus_tag="OQQ57_003291"
                     /pseudo
     CDS             complement(4800..5914)
                     /gene="yneK"
                     /locus_tag="OQQ57_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707449.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
     gene            complement(5992..6873)
                     /locus_tag="OQQ57_003292"
     CDS             complement(5992..6873)
                     /locus_tag="OQQ57_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1957950.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAIVLRVPSNLTIRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV
                     RIPATLAEFNHRYPKIQFSLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYR
                     EELMIVTPQGHAPVIRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY
                     HGMLACVVAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE
                     AFIQLLDVPDSAKQGYQ"
     gene            6974..8363
                     /gene="sad"
                     /locus_tag="OQQ57_003293"
                     /pseudo
     CDS             6974..8363
                     /gene="sad"
                     /locus_tag="OQQ57_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416042.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
     gene            8427..9353
                     /gene="glsB"
                     /locus_tag="OQQ57_003294"
     CDS             8427..9353
                     /gene="glsB"
                     /locus_tag="OQQ57_003294"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HCS1957951.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
                     IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            9353..9712
                     /locus_tag="OQQ57_003295"
     CDS             9353..9712
                     /locus_tag="OQQ57_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HCS1957952.1"
                     /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR
                     YIVAVIYHWLVVQMNQP"
     gene            9851..11269
                     /locus_tag="OQQ57_003296"
     CDS             9851..11269
                     /locus_tag="OQQ57_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HCS1957953.1"
                     /translation="MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIVAELRLVHEL
                     SLFWPLNGVMAGVFARYVWLNRLHYYAISYVVMLVYDAITTEWGLVSLVINFSNMMFI
                     VTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLA
                     DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAF
                     PLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIA
                     TMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTV
                     MLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNP
                     VDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
                     LYRSKKDGRNRTSTMRYGEEVV"
     gene            11496..11735
                     /locus_tag="OQQ57_003297"
                     /pseudo
     CDS             11496..11735
                     /locus_tag="OQQ57_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="catalyzes the formation of D-tagaturonate from
                     D-altronate; incomplete; partial in the middle of a
                     contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
BASE COUNT         2988 a         2661 c         3031 g         3105 t
ORIGIN      
        1 atggggcggc gcggtagccg cgcatcagtt ggaaggtggc tggaatgaag gaggaaaagg
       61 catcagtatc gctgatgtga tgactgctgg cgctcacggg gtgccgcgtg aagtgacaga
      121 aggcgttatc gacgggctta attatcccaa tcatgaagca attgattttt atcatcgcta
      181 taaaacagat attcagttat ttgccgagat gggattcaaa tgctttcgaa cttccattgc
      241 ctggacacga atctttccgc aaggtgacga acaggagccg aatgaagagg gtttacaatt
      301 ttatgatgat ctgttcgatg aatgccttaa gcagggaatg gaacctgtgg tgacgctttc
      361 acattttgag atgccttatc atctggtgac aaaatatggt ggctggcgaa accgtaaact
      421 gatcgacttt tttatccgct tcgcatcaac ggtcttcacg cgctataaag aaaaagtaaa
      481 gtactggatg acgtttaacg aaatcaataa tcaggtgaat ttcagcgaaa gcctgtgtcc
      541 atttactaat tccggtatct tgtattcgcc agaggaagat atcaatgagc gcgaacaaat
      601 aatgtaccag gcggtacatt acgagttagt tgccagtgcc ctggcggtac agactggaaa
      661 atcgatcaat cctgaattta acattggctg tatgatcgcc atgtatccca tctatcctct
      721 gacgtgtgta cccaacgata tgatgatggc cacgaaagca atgcatcgtc gttactggtt
      781 tactgatgtt catgctcgtg gatattatcc gcaacatatg ctgaattact ttgccaggaa
      841 aggattcaac ctcgatatca caccagaaga taacgcgatt cttgccagtg gttgtgtcga
      901 ctttatcggc tttagctact acatgtcttt tacgacacaa ttttcgcccg ataacccgca
      961 actggattat gttgaaccac gagatttggt cagcaaccct tatatcgata catccgaatg
     1021 gggatggcaa attgatccgg cagggctacg ttattcactc aactggttct gggatcattt
     1081 ccagttgccg ctgtttattg tcgaaaatgg atttggtgcg gttgaccaga gacaagctga
     1141 cggcacggtg aacgatcact atcgcattga ttactttgct tcccatattc gggaaatgaa
     1201 aaaagccgta gttgaagatg gtgttgactt aattggctac accccgtggg gctgcattga
     1261 cctggtttct gccggaacag gggaaatgaa aaagcgctac ggaatgattt atgtcgataa
     1321 agacaacgaa gggaagggaa cgctggaacg gatacgtaaa gcgtcgtttt actggtatcg
     1381 ggatctcatc gccaacaatg gcgaaaatat ttgagacttg aggaagatat tacggagatg
     1441 tcaggctctg tgatcagagc ctgacaataa ctacatagcg tgttgattat aatagggcac
     1501 gccgagcgca tccgacttat cactgccagt acccatgtga tttaaatcaa acggtggttg
     1561 ttcctgcgat gggggaacaa ccacgacatt ggcacaagaa gtaacaactg gctgcgtggt
     1621 ttgttccgca acgccctgcg cggaaaagag aataagcgca gctgctattg cggatgaaag
     1681 tggtttcatg attgcctcag tgacgttgtc acgttatcaa ctagctattg taatgattta
     1741 atggatgtaa aaagcgcgat tcgccctgca tattggtcat ccggtattta tgtggcggaa
     1801 catcaaagta atttttgaag gttcgggtca gagtttgttg cgactcgaag ccatatcgtt
     1861 ctgccagata gagtatcggc tcgttacttt ccttcagctt ttgcgcgatt tccgtcatct
     1921 tacggctgcg gatgtattgg cctaatgaat gaccggtttc ttttttaaac atccgttgca
     1981 ggtgccattt agagtaacct gaacgctctg acactttctc cagtgacagt ggcgattcca
     2041 ggttgtcctc gatccagtcc aaaatgctat gaatggtaat agcgtcagta ttgcgtctgg
     2101 acatcgtcat acctcttttt tgtttacggc aggactttct taagcaaatg ctcaagtgtt
     2161 gccacttcgt ccgccgtcag gttttttgtt aattcttgat gcaggtcctg gccaactaat
     2221 tgatggcatt gttcgcatat tgccgcgccg ctggtggtaa gttttaccag tacgccgcgc
     2281 ttatcattcg ggttcggcaa cctttcaacc cagcctttac agaccaggcg atccagcata
     2341 cgggtcagtg ctccaaggtc gacagacaac acttttttca gttcaaccgg agtaatacac
     2401 gccgcgcagc ggatagagca gagcacctta aactgtgccg cggtaatatc cagcggagac
     2461 agatactcgt taagcagacg atctttcttc tgattaacca tatggattaa gcgacccaat
     2521 ggaataattt cattgaacag atcgctggta cttttcacat tagttgccct ggcaagtaat
     2581 tagttgcagg gggtaatatt gcccaggcaa gtataagtca aataaatgaa ttgaccgatg
     2641 ccacgttttg ctaaatcggt tcaagttttg gtcaatgcga tgcaaggtta gctaaagagt
     2701 gacactttat ccttgtttac cccttatact tttcgctgat aacccagata cactggataa
     2761 caaccaccaa tgttagattt gtttaaagca attggcctgg ggctggtggt gttactgccg
     2821 ttagctaacc cattaacaac tgtcgcgtta tttcttggcc tggcaggcaa catgaacagt
     2881 gccgaacgta atcgtcagtc gttgatggcc tcggtgtacg tatttgccat catgatggtg
     2941 gcgtattacg ccgggcaact ggtgatggat acatttggca tttcgattcc cggtctgcga
     3001 attgcaggcg gcttaatcgt cgcgtttatc ggttttcgga tgctctttcc gcaacagaaa
     3061 gcgattgatt caccggaggc gaaaagcaag tcggaagagc tggaagatga acccagtgcc
     3121 aatattgcct ttgtgccgct agcaatgcca agtaccgctg gtccgggaac catagcgatg
     3181 attattagct cggcgtccac agtgcgtcag agttcaacct tcgctgattg ggtactgatg
     3241 gttgcgccgc cgctgatctt tttcctggtg gcggttattt tgtggggaag cctacgcagc
     3301 tccggcgcaa ttatgcggct ggtgggcaag ggtggcattg aagcgatctc ccgtctgatg
     3361 ggattcctgc tggtatgtat gggtgtgcag tttattatta acggcatcct ggaaatcatt
     3421 aaaacgtacc attaaaaaag gcccgaatgg gcctttcaac tattgcgtct gttcttcgag
     3481 tgtcactggc cagcggcgaa atataatgat tgaccatatt aacgcggcaa aagcaggcac
     3541 cgcgcccaca taaccaatca tcgacattga ccagtgcaaa ctcacctgat tacctaccaa
     3601 cgcacccgcc ccgattccaa tattaaatat gccggagaat agcgccatcg cgacgtcggt
     3661 agcatctggt gccagcgcca gcactttaac ctgcatacca agcccgatga tcatcatcgc
     3721 gatcccccag aaaatactca gcaccccgag gtgtatttca ctgttcgccg caggtagcag
     3781 cagtgccaga cacaccagca acagcgcaat cgccgtactc accaacgcag acgcatactg
     3841 attacccagt ttaccgaaaa tcacgctgcc aataatgccc gcaccaccga gtaataacag
     3901 taatgccgtg gcaaagttgg cgctgaatcc cgcaatgttt tgcacaaaag gctcgatata
     3961 gctgtatgcc gtgtaatggg cggtgacaac caccacagtt aacaaataaa tgctcatcaa
     4021 tgccgggcgg cggaacaata gcgggaggct tttcaatgaa ccggaatgct cactgggcag
     4081 taagggaagt aacttaatca ggcacaaaag ggtgataagc gccccaatac caatcgcgaa
     4141 gaaggtcatt cgccaaccga aatactgccc cacaatgcgc ccgagaggta aacctaagac
     4201 catcgccagt gctgtaccgg tggcaattaa actcaaggcc tgtgcccgct tcccggccgg
     4261 agccatacgg atcgccagag acgccgtaat cgaccagaaa atcgcatgtg caaaagccac
     4321 accaatgcga ctgatcacca gaacggtaaa gctccacgat aaaaacgaca gtacgtggct
     4381 ggcaataaac accacaaaca ggcagatcag taatttgcgc cgttcaacct gactggtcat
     4441 taacataaaa ggcaatgaca ttagcgctac tacccatgcg taaatggtca acatgatgcc
     4501 gacctgagcg gtttgcatgt gaaaactttg cgcaatgtca gagagcaggc caacagggac
     4561 aaattcggtg gtgttgaaga tgaaggcggc gactgccagc gtaacgaccc gtagccacgc
     4621 cactttgcgg gaaacagtgt ttgttgtcat aacagattat cgggtgagtt gcgaaaaagt
     4681 gatgaaatga tcttaaaacg gttaatgatg tgaatacaat gcatttgtga tctggatcgc
     4741 gttttccgtt tctctgacgc tgattctgtt ccgcgtcaga gagtcggtaa catcacggtt
     4801 taatgacgtt cagggaggtc tggcgttttg gcggttgcgg gtataggtgg tctgacaggg
     4861 gagcgaggcc tgtttttcac caggtcttcg tgagtaactt ttggcggcgt ttcatttttt
     4921 acaaacagtt tgagggtcct gcgcgccata tgcttgataa ttttatcatc acttaatgat
     4981 gctggcatca acacgtcatt cagatcactt tcattgggat tcataaattg gtgatagtgc
     5041 aataacatat tggcgaaaaa taaaaaaaag tcctgaaaat gaggagattc ttgttctgct
     5101 aaaagggata aaaagcagat gcagacttcg ggtagtacat gtttgttaga acctaatgaa
     5161 tccatcaggc tttgcaataa atcctctttt aattcgccgt ctgttatgtc gagaatggcg
     5221 gtgatcaagt taggatcttt attgacgaac catctgtgaa cctcagagtt actccataat
     5281 cgggggagta tgacaaaatt accgcgagag ataaaattca ggacaagcaa atcaaactgg
     5341 cgtaagtaat ctgcagcggt atggtgatcc ggaggcaggg gttcaatatg tggtgtatgc
     5401 gcttttttga tggggacgcc aaggtggatc attggaaatt gttcaataaa atcattcgga
     5461 aacagaaaga gcacacgctc gacgccggtg tgaaatacgc gccccatagt gacaggcttt
     5521 gggttgggag cgcaaaaata ttaatttctc catcatggcg aaaattatct aaataaatag
     5581 ggtttaaatt tattactacc tgaaattcaa tattttcttt gtgtcttcca ttcttgacgg
     5641 gataagtgag tttaaactga accttttcat tgtatagtgt gtcgttaccc cgaaaagaag
     5701 tcctctgaat atatgataag ttatcaaggt tgttaaatat cttttttgtg gctgagttgg
     5761 tgtttaaaga cgtgcgccac tcttcatcac atattatggt actgagtgca tcaataaaat
     5821 tctttaaaac ttcttttacc tgaggtgcaa tattacgtac gggaaaatca tcaggaagaa
     5881 atatgtaatt actgatgctt actggcgtaa ccatatttgc cccatatagt cataagtcat
     5941 cggaacatca ctatataggg catttgagct gcaagaacta tcaaaaatag ctcattggta
     6001 accctgtttt gccgagtcag gcacatccag tagttgaata aatgcctcaa gcggacgcgt
     6061 tttcgcacca cgacgccaga ccagccaggt tgttaaccaa cgccattgct cagctaacgg
     6121 ccacgcttca acctggtgat gccccggcat actttccagc atagagcgtg gaataagcgc
     6181 aatgcctgct cctgcgacca cacaggccaa catcccgtga tacgactcca tctcgtgaat
     6241 agttcccgga gcggcaccgt cagcatgaaa ccagctctcg aagtggcgac gatacgaaca
     6301 attggcgcgg aaggcataaa tgttactgcc gttaacctga ctggcgcgga ttactggcgc
     6361 atgaccttgt ggcgtgacga tcatcagctc ctcgcggtat accggtatcc cgtcaatggc
     6421 agtatggtta atgggcccat caataaatgc cgcattcagt tttccctcca gcactccttc
     6481 cagcatagtg ccggaagggc cggtggaaag tgaaaactga attttgggat aacgatggtt
     6541 gaattccgcc agcgtggccg gaatgcgcac tgctgcggtg ctttccagcg aaccaagaga
     6601 aaataaacct tgcggctcat cgccagcgac aacgctccgc gcttcatcca ctaacgcgag
     6661 aatttgttgg ctatagcgta aaaagttatg cccggcagga gagagacgta aacgctgatt
     6721 ctcgcgaata aacagatcta cccccagttc tgtttccagc tggcgtagac ggatagtgag
     6781 attcgacggc acgcgaagca ctattgctgc tgcctgggtt atgctgccag cttcggcaac
     6841 cgcgttgaac atctccagtt gggtcagatc cataatattc tcgattcgtg aataagtggc
     6901 ttaatattat tcattttaaa gcaagagtaa atctgcgtat cttcatacca tgactcataa
     6961 aggagatacc ccgatgacca ttactccggc aactcatgca atttcgataa atcctgccac
     7021 gggtgaacaa ctttctgtgc tgccgtgggc tggcgctaac gatatcgaaa acgcacttca
     7081 gctggcggca gcaggctttc gcgactggcg cgagacaaat atagattatc gtgctgaaaa
     7141 actgcgtggt atcggtaagg ctctgcgcgc ccgtagcgaa gaaatggcgc aaatgatcac
     7201 ccgtgaaatg ggcaaaccaa tcaatcaggc gcgcgctgaa gtggcgaaat cggcgaattt
     7261 gtgtgactgg tatgcagaac atggtccggc aatgctgaag gcggaaccta cgctggtgga
     7321 aaatcagcag gcagttattg agtatcgacc gttggggatg attctggcga ttatgccgtg
     7381 gaactttccg ttatggcagg tgatgcgtgg cgcggttccc atcattcttg caggtaacgg
     7441 ctacttactt aaacatgcgc cgaatgtgat gggctgtgct cagctcattg cccaggtgtt
     7501 taaagatgcg ggaatcccgc aaggcgtata tggctggctg aatgccgaca acgacggtgt
     7561 cagtcaaatg attaaagatt cgcgcattgc tgctgtcacg gtgaccggaa gtgttcgtgc
     7621 gggagcggct attggcgcac aggctggagc ggcactgaaa aaatgcgtac tggaactggg
     7681 cggttcggat ccatttattg tgcttaacga tgccgatctg gaactggcgg ttaaagcggc
     7741 ggtagccgga cgttatcaga ataccggaca ggtttgtgca gcggcaaaac gctttattat
     7801 cgaagaggga attgcttctg catttaccga acgttttgtg gcagctgcgg cagccattga
     7861 aaatgggcga tccccgtgat gaagagaacg ctctcggacc aatggctcgt tttgatttac
     7921 gtgatgagct gcatcatcag gtggagaaaa ccctggcgca gggtgcgcgt ttgttactgg
     7981 gcggggaaaa gatggctggg gcaggtaact actatccgcc aacggttctg gcgaatgtta
     8041 ccccagaaat gaccgcgttt cgggaagaaa tgtttggccc tgttgcggca atcaccgttg
     8101 cgaaagatgc agaacatgcg ctggaactgg ctaatgatag tgagttcggc ctttcagcga
     8161 ccatttttac caccgacgaa acacaggcca gacagatggc ggcacgtctg gaatgcggtg
     8221 gggtgtttat caatggttat tgtgccagcg acgcgcgagt ggcctttggt ggcgtgaaaa
     8281 agagtggctt tggtcgtgag ctttcccatt tcggcttaca cgaattctgt aatatccaga
     8341 cggtgtggaa agaccggatc tgacgcgaca tattcagctc tgatatactc gcaggtcttt
     8401 tcagacctgc ggtccaggag tagaaagtgg cagtcgccat ggataatgca attttagaaa
     8461 acatcttgcg gcaagtgcgg ccgctcattg gtcagggtaa agtcgcggat tatattccgg
     8521 cgctggctac agtagacggt tcccgattgg gcattgctat ctgtaccgtt gacggacagc
     8581 tttttcaggc cggagacgcg caagaacgtt tttccattca gtctatttcc aaagtgctga
     8641 gtctcgttgt cgccatgcgt cattactccg aagaggaaat ctggcaacgc gtcggcaaag
     8701 atccgtctgg atcaccgttc aattctttag tgcaactgga aatggagcag ggtattccgc
     8761 gtaatccgtt tattaatgct ggtgcgctgg tggtctgcga tatgttgcaa gggcgattaa
     8821 gcgcaccacg gcaacgtatg ctggaagtcg tgcgcggctt aagcggtgtg tctgatattt
     8881 catacgatac ggtggtagcg cgttccgaat ttgaacattc cgcgcgaaat gcggctatcg
     8941 cctggctgat gaagtcgttt ggcaatttcc atcatgacgt gacaaccgtt ctgcaaaact
     9001 actttcatta ctgcgctctg aaaatgagct gtgtagagct ggcccggacg tttgtctttc
     9061 tggctaatca ggggaaagct attcatattg atgaacctgt ggtgacgcca atgcaggcgc
     9121 ggcaaattaa cgcgctgatg gcgaccagtg gtatgtacca gaacgcgggg gagtttgcct
     9181 ggcgggtggg gctaccggcg aaatctggcg ttggtggcgg tattgtggcg attgttccgc
     9241 atgaaatggc catcgctgtc tggagtccgg aactggatga tgcaggtaac tcgcttgcgg
     9301 gtatcgccgt ccttgaacaa ttgacgaaac agttagggcg ttcggtttat taatgcagtc
     9361 tctcgatcca ctcttcgcgc gtttatcccg ttcaaaattt cgctctcgct ttcgtctggg
     9421 catgaaagag cgtcagtatt gcctggagaa aggcgcgcca gtcatcgaac aacatgcggc
     9481 ggattttgtc gctaaacgtc ttgctccggc attaccggct aatgacggta agcaaacacc
     9541 catgcgcggg catccggtgt ttatcgctca gcacgccacc gcgacctgct gtcgcggttg
     9601 tctggctaag tggcataaca ttccgcaggg tgtttcgtta agcgaagaac aacaacgtta
     9661 tatcgtggcg gtaatctatc actggctggt tgtacagatg aatcagccat gagaattgcg
     9721 gaaaacgata aaatagcatt cccagggtac ctttatttgc cgccgctgtt agcgaacatg
     9781 ctatccttta tgagaattta cttattacgt tgagataatt gccacccgca attgtatgga
     9841 cagataatta atgcatgtac accccatttc aactttccgt ttgttccagg aaggtcatct
     9901 gctacgtaat agcatcgcta tttttgcgct aaccacgctg ttctatttta ttgttgcaga
     9961 gttacggctg gttcacgaac tttctctttt ctggccgctg aatggcgtaa tggcgggggt
    10021 gtttgcccgc tatgtctggc ttaatcgact gcattactat gcgatcagtt atgtggtgat
    10081 gctggtttat gatgccataa ccaccgaatg gggactggtt tcactggtta tcaatttctc
    10141 caatatgatg tttattgtta ccgtcgcctt actggtcgtg cgggataagc gtctggggaa
    10201 aaataagtat gagccagtaa gtgccttacg gctatttaat tactgtctga ttgccgcatt
    10261 attatgcgct attgtcgggg cgattggttc ggtcagtatt gatagtctgg atttctggcc
    10321 tttgcttgcg gactggttca gtgagcaatt ctcaacgggc gtgttgatcg tgccttgtat
    10381 gctgacgttg gctattcctg gagtgctgcc gcgctttaaa gcagaacaga tgatgcccgc
    10441 catcgcgctt attgtgtcgg ttattgcctc ggtagtcatt ggcggagcgg ggagtctggc
    10501 gttcccgctg cctgcattaa tctggtgtgc agtgcgctat acgccgcagg taacatgtct
    10561 gttgaccttt gtcaccggtg cggtggaaat cgtactggtg gcaaattcgg tgattgatat
    10621 ctcggtcggt tcgccgttct ccattccgga aatgttctcc gcacgtctcg gtattgccac
    10681 gatggcgata tgcccaatta tggtttcttt tagcgtggca gcgatcaatt cgctaatgaa
    10741 gcaagttgcg ctgcgagccg actttgattt tctgactcag gtttactcac ggtccggtct
    10801 ttatgaggcg ctgaaaagtc catcgctgaa acagacacaa catctgacgg tcatgctgct
    10861 tgatatcgac tatttcaaaa gcattaacga taactatgga catgaatgtg gcgataaagt
    10921 gttaagcgtg tttgcccggc atattcagaa gattgtcggt gataaggggc tggtggcgcg
    10981 catgggcggc gaagaatttg ctgttgcagt gccgtcggtg aatcctgtcg atggtctgct
    11041 aatggcggaa aaaatccgta aaggcgttga actgcaacca ttcacctggc aacaaaaaac
    11101 gctttatctc acggtaagta ttggcgtcgg tagtggtcgc gcatcgtacc gaacgctgac
    11161 cgatgatttt aataaattga tggtcgaagc cgatacgtgt ctgtatcgct cgaagaaaga
    11221 tgggcgcaac cgtaccagca ctatgcgtta cggtgaggaa gttgtctgac atctttattc
    11281 attccgcgcg atttgaatgc aatgtgttct accactttat gatccaggaa aaggcgtatt
    11341 tcctcgatta aaccatgatc cgcgccacac ttttctcata aaactgctca ttaatcatca
    11401 ggagttgatc aaaacagggg ttcggcgtat taaattttgc taacctgtcg taccaattca
    11461 agcgggttgt atgactaatc agaagggaac ccattgtgaa aacactaaat cgtcgcgata
    11521 ttcccggtgc acagtatcca gaacgtatca ttcagtttgg tgaaggtaac ttcctgcgcg
    11581 cctttgttga ctggcaaatc gatctcctga atgagcacac cgatctgaat tctggcgtgg
    11641 tcgttgttcg tccgattgaa acttcattcc cgccgtcact gagcacgcag gatggtctgt
    11701 acaccaccat tatccgtggc ctgaatgaga aggggtgaag tggtcaacaa aaactggcca
    11761 ccgagttaga gtttttccag tatcg
//
LOCUS       DAJVUK010000135        11680 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.135, whole genome shotgun sequence.
ACCESSION   DAJVUK010000135 DAJVUK010000000
VERSION     DAJVUK010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11680
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.135"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..565)
                     /gene="hxpA"
                     /locus_tag="OQQ57_003298"
     CDS             complement(<1..565)
                     /gene="hxpA"
                     /locus_tag="OQQ57_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpA"
                     /protein_id="HCS1957954.1"
                     /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
                     GKQAITSLRHFMAGKSEADIAAEFTCLEHIEATETEGITALPGAIALLNHLNKAGIPW
                     AIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV
                     AEDAPAGVLSGLAAGCHVIAVNAPADTP"
     gene            complement(576..1070)
                     /locus_tag="OQQ57_003299"
     CDS             complement(576..1070)
                     /locus_tag="OQQ57_003299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HCS1957955.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACLRQYHLSANEINQ
                     IINA"
     gene            complement(1154..1609)
                     /locus_tag="OQQ57_003300"
     CDS             complement(1154..1609)
                     /locus_tag="OQQ57_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HCS1957956.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            1947..3149
                     /gene="ackA"
                     /locus_tag="OQQ57_003301"
     CDS             1947..3149
                     /gene="ackA"
                     /locus_tag="OQQ57_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HCS1957957.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            3224..5368
                     /gene="pta"
                     /locus_tag="OQQ57_003302"
     CDS             3224..5368
                     /gene="pta"
                     /locus_tag="OQQ57_003302"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCS1957958.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNQEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            5558..7078
                     /gene="yfcC"
                     /locus_tag="OQQ57_003303"
     CDS             5558..7078
                     /gene="yfcC"
                     /locus_tag="OQQ57_003303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HCS1957959.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRL
                     NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQITVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(7111..7653)
                     /gene="yfcD"
                     /locus_tag="OQQ57_003304"
     CDS             complement(7111..7653)
                     /gene="yfcD"
                     /locus_tag="OQQ57_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HCS1957960.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(7711..8262)
                     /gene="yfcE"
                     /locus_tag="OQQ57_003305"
     CDS             complement(7711..8262)
                     /gene="yfcE"
                     /locus_tag="OQQ57_003305"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HCS1957961.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(8318..8950)
                     /gene="yfcF"
                     /locus_tag="OQQ57_003306"
     CDS             complement(8318..8950)
                     /gene="yfcF"
                     /locus_tag="OQQ57_003306"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HCS1957962.1"
                     /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
                     HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
                     RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASVAMAEHLLALGQPNLFGEW
                     CIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
     gene            9086..9733
                     /gene="yfcG"
                     /locus_tag="OQQ57_003307"
     CDS             9086..9733
                     /gene="yfcG"
                     /locus_tag="OQQ57_003307"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HCS1957963.1"
                     /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
                     RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF
                     WQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
                     IADIACWPWVNAWTRQRIDLTMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
     gene            9790..10152
                     /gene="folX"
                     /locus_tag="OQQ57_003308"
     CDS             9790..10152
                     /gene="folX"
                     /locus_tag="OQQ57_003308"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HCS1957964.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            10173..11066
                     /locus_tag="OQQ57_003309"
     CDS             10173..11066
                     /locus_tag="OQQ57_003309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HCS1957965.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVVLAPDGGILGKMLPPFRLGLGGPIDSGRQYLAWIHIDDMVNGILWLLDNELRG
                     PFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(11114..>11680)
                     /gene="rpnB"
                     /locus_tag="OQQ57_003310"
     CDS             complement(11114..>11680)
                     /gene="rpnB"
                     /locus_tag="OQQ57_003310"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnB"
                     /protein_id="HCS1957966.1"
                     /translation="AGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSS
                     AFPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLK
                     ALFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQ
                     EMLDRGLDRELVMMVTRLSPDDLIAQSH"
BASE COUNT         2793 a         3100 c         2924 g         2863 t
ORIGIN      
        1 gcggggtatc tgccggagcg ttaaccgcaa tgacatggca acccgccgcc aggccagaaa
       61 gcacgccagc gggagcatct tccgccacca cacactcctg cggcgcaagc cccagcagct
      121 gcgcacctaa cagatacgca tcaggttctg gttttccgcg cttcactcgc tcagcggtta
      181 caaacacctc tggtgcggga agcccagcta ttttatggcg cgctcgcgct accggcatgg
      241 agccagaagt cacaatggcc cacggaatac ctgctttatt caaatgattg agtaaggcga
      301 ttgcccccgg aagcgcggta ataccttcgg tttccgtggc ctcgatgtgc tccagacacg
      361 taaactcggc ggcaatatca gcctcggatt tgcccgccat aaaatggcgc aaagaggtga
      421 tcgcctgttt accgtgaatg aaagccagca cctcttccgg cgctaaccca tgacgtctgg
      481 cccagttgct ccacgcccgt tctaccgcag gcagggaatc caccagcgtt ccatcaagat
      541 caaacagaaa acctttgcac cgcacgcggg cctcctcagg cgttgataat ttgattaatt
      601 tcgttggcgc tcaaatggta ctgacgcagg caggcatgcc acacattaag catgcgctga
      661 tatttttccc acattggcgt ctgggcgtta aaaccatgag tcccagcgtc aaaatgggta
      721 tagcgccctt ccacattaac cataaagcgg acataaccga ggtaacgtgc ttcagtggcg
      781 gcgtcaaagc cgaggaaggt gacacgacgt tcatcgatgg attgctggtc ctgcaaatta
      841 gaccaggaaa catgcaacgc atgatacatc tccataatgt cgatgatagt gcggcaggtt
      901 tcttctttca gctcgccaaa ctcgcgatcc aattcacgca tctgtaatcc gtaaccacgc
      961 tcaataattg tttgcaggcg acggtaacgt tcagcatttg ccggatcgag catagtcatc
     1021 atcttgtact gattagacaa aataagacgt tgcgcgttgg tcatttccat tgttgactcc
     1081 tgtatcactc tactacggtg aaaaaaaaag aaggctgagt atgccttctt ttatatgcgt
     1141 aatcaggggt caattacaaa tcatcaagga aagttttatc cagttgtttg aaggcgcgct
     1201 taagcgtgtc agctaatgcc tggtaatcag gcttgccttc aacgggtgcc aacacctgtc
     1261 cagactcctg caatttaccg cgaacttcat aaaaccagtt gaggatagca gggggtaatg
     1321 gcgttacaga acgcttgccc agccaccata atccctgcat gggtaaactt aaggcgaaca
     1381 gcgcagtggc aactgccggc ccaagctgac cgcccagggc aatctgccag cagagagtaa
     1441 atacggcgat cggcggcata aaacggatcg cataacgcgt catcttgata acgcgatttt
     1501 cgacaaagac cggggcaagg cgtttttcca gcggccacgt ctttgagtaa tgctgtcccc
     1561 ggcgaaacaa gctaaaaaaa ttaacagaac gattatccgg cgttgacatg cttcacctca
     1621 acttcacata taaagattca aaaatttgtg caaattcaca actcagcggg acaacattca
     1681 aaacattttg tcttccatac ccactatcag gtatccttta gcagcctgaa ggcctaagta
     1741 gtacatattc attgagtcgt caaattcata tacattatgc cattggctga aaattacgca
     1801 aaatggcata gactcaagat atttcttcca tcatgcaaaa aaaatttgca gtgcatgatg
     1861 ttaatcataa atgtcggtgt catcatgcgc tacgctctat ggctccctga cgttttttta
     1921 gccacgtatc aattataggt acttccatgt cgagtaagtt agtactggtt ctgaactgcg
     1981 gtagttcttc actgaaattt gccatcatcg atgcagtaaa tggtgaagag tacctttctg
     2041 gtttagccga atgtttccac ctgcccgaag cacgtatcaa atggaaaatg gacggcaata
     2101 aacaggaagc ggctttaggt gcaggcgccg ctcacagcga agcgctcaac tttatcgtta
     2161 atactattct ggcacaaaaa ccagaactgt ctgcgcagct gactgctatc ggtcaccgta
     2221 tcgtacacgg cggcgaaaag tataccagct ccgtagtgat cgatgagtct gttattcagg
     2281 gtatcaaaga tgcagcttct tttgcaccgc tacacaaccc ggctcacctg atcggtatcg
     2341 aagaagctct gaaatctttc ccacagctga aagacaaaaa cgttgctgta tttgacaccg
     2401 cgttccacca gactatgccg gaagagtctt acctctacgc cctgccttac aacctgtaca
     2461 aagagcacgg catccgtcgt tacggcgcgc acggcaccag ccacttctat gtaacccagg
     2521 aagcggcaaa aatgctgaac aaaccggtag aagaactgaa catcatcacc tgccacctgg
     2581 gcaacggtgg ttccgtttct gctatccgca acggtaaatg cgttgacacc tctatgggcc
     2641 tgaccccgct ggaaggtctg gtcatgggta cccgttctgg tgatatcgat ccggcgatca
     2701 tcttccacct gcacgacacc ctgggcatga gcgttgacgc aatcaacaaa ctgctgacca
     2761 aagagtctgg cctgctgggt ctgaccgaag tgaccagcga ctgccgctat gttgaagaca
     2821 actacgcgac gaaagaagac gcgaagcgcg caatggacgt ttactgccac cgcctggcga
     2881 aatacatcgg tgcctacact gcgctgatgg atggtcgtct ggacgctgtt gtattcactg
     2941 gtggtatcgg tgaaaatgcc gcgatggttc gtgaactgtc tctgggcaaa ctgggcgtgc
     3001 tgggctttga agttgatcat gaacgcaacc tggctgcacg tttcggcaaa tctggtttca
     3061 tcaacaaaga aggtacccgt cctgcggtgg ttatcccaac caacgaagaa ctggttatcg
     3121 cgcaagacgc gagccgcctg actgcctgat ttcacaccgc cagctcagct ggcggtgctg
     3181 ttttgtaacc cgccaaatcg gcggtaacga aagaggataa accgtgtccc gtattattat
     3241 gctgatccct accggaacca gcgtcggtct gaccagcgtc agccttggcg tgatccgtgc
     3301 aatggaacgc aaaggcgttc gtctgagcgt tttcaaacct atcgctcagc cgcgtaccgg
     3361 tggcgatgcg cccgatcaga ctacgactat cgtgcgtgcg aactcttcca ccacgacggc
     3421 cgctgaaccg ctgaaaatga gctacgttga aggtctgctt tccagcaatc agaaagatgt
     3481 gctgatggaa gagatcgtcg caaactacca cgctaacacc aaagacgctg aagtcgttct
     3541 ggttgaaggt ctggtcccga cacgtaagca ccagtttgcc cagtctctga actacgaaat
     3601 cgctaaaacg ctgaatgcgg aaatcgtctt cgttatgtct cagggcactg acaccccgga
     3661 acagctgaaa gagcgtatcg aactgacccg caacagcttc ggcggtgcca aaaacaccaa
     3721 catcaccggc gttatcgtta acaaactgaa cgcaccggtt gatgaacagg gtcgtactcg
     3781 cccggatctg tccgagattt tcgacgactc ttccaaagct aaagtaaaca atgttgatcc
     3841 ggcgaagctg caagaatcca gcccgctgcc ggttctcggc gctgtgccgt ggagctttga
     3901 cctgatcgcg actcgtgcga tcgatatggc tcgccacctg aatgcgacca tcatcaacga
     3961 aggcgacatc aatactcgcc gcgttaaatc cgtcactttc tgcgcacgca gcattccgca
     4021 catgctggag cacttccgtg ccggttctct gctggtgact tccgcagacc gtcctgacgt
     4081 gctggtcgcc gcttgcctgg cagccatgaa cggcgtagaa atcggtgccc tgctgctgac
     4141 tggcggctac gaaatggacg cgcgcatttc taaactgtgc gaacgtgctt tcgctaccgg
     4201 cctgccggta tttatggtga acaccaacac ctggcagacc tctctgagcc tgcagagctt
     4261 caaccaggaa gttccggttg acgatcacga acgtatcgag aaagttcagg aatacgttgc
     4321 taactacatc aacgctgact ggatcgaatc tctgactgcc acttctgagc gcagccgtcg
     4381 tctgtctccg cctgcgttcc gttatcagct gactgaactt gcgcgcaaag cgggcaaacg
     4441 tatcgtactg ccggaaggtg acgaaccgcg taccgttaaa gcagccgcta tctgtgctga
     4501 acgtggtatc gcaacttgcg tactgctggg taatccggca gagatcaacc gtgttgcagc
     4561 gtctcagggt gtagaactgg gtgcagggat tgaaatcgtt gatccagaag tggttcgcga
     4621 aagctatgtt ggtcgtctgg tcgaactgcg taagaacaaa ggcatgaccg aaaccgttgc
     4681 ccgcgaacag ctggaagaca acgtggtgct cggtacgctg atgctggaac aggatgaagt
     4741 tgatggtctg gtttccggtg ctgttcacac taccgcaaac accatccgtc cgccgctgca
     4801 gctgatcaaa actgcaccgg gcagctccct ggtatcttcc gtgttcttca tgctgctgcc
     4861 ggaacaggtt tacgtttacg gtgactgtgc gatcaacccg gatccgaccg ctgaacagct
     4921 ggcagaaatc gcgattcagt ccgctgattc cgctgcggcc ttcggtatcg aaccgcgcgt
     4981 tgctatgctc tcctactcca ccggtacttc tggtgcaggt agcgacgtag aaaaagttcg
     5041 cgaagcaact cgtctggcgc aggaaaaacg tcctgacctg atgatcgacg gtccgctgca
     5101 gtacgacgct gcggtaatgg ctgacgttgc gaaatccaaa gcgccgaact ctccggttgc
     5161 aggtcgcgct accgtgttta tcttcccgga tctgaacacc ggtaacacca cctacaaagc
     5221 ggtacagcgt tctgccgacc tgatctccat cgggccgatg ctgcagggta tgcgcaagcc
     5281 ggttaacgac ctgtcccgtg gcgcactggt tgacgatatc gtctacacca tcgcgctgac
     5341 tgcgattcag tctgcacagc agcagtaatc tcgtcatcat ccgcagcttt gcgctgcgga
     5401 tatctgaacc ggaaataatc actatttccg gttttttatt ctcttaatct gcattaatcc
     5461 tttctgatta tcttgcttaa ctgcgctgca tcaatgaatt gcgccatttc actttgcata
     5521 cttaccactt tgttttgtgc aagggaatat ttgcgctatg tccgcaatca ctgaatccaa
     5581 accaacaaga agatgggcaa tgcccgatac gttggtgatt atcttttttg ttgctatttt
     5641 aaccagcctt gccacctggg tagttccggt ggggatgttt gacagtcagg aagtgcagta
     5701 tcaggttgat ggtcaaacaa aaacacgcaa agtcgtagat ccacactcat ttcgcattct
     5761 gactaacgaa gcaggcgaac ctgagtatca ccgcgtacag ctgttcacga cgggcgatga
     5821 acgcccgggc ctgatgaact tcccgtttga aggattaacc tcaggatcga aatacgggac
     5881 agctgttggc atcatcatgt ttatgctggt gattggcggc gcgtttggca ttgtgatgcg
     5941 tacaggaacc attgataacg gtatcctggc gcttattcgc catacccgcg ggaatgaaat
     6001 tctctttatt cctgcgctgt ttattctgtt ttcacttggc ggcgcggtat ttggtatggg
     6061 agaagaggcc gtcgcctttg ccattatcat cgcaccgcta atggtccggc tgggctatga
     6121 cagtattacc accgtcctgg tgacctatat tgccacgcaa atcggttttg ccagttcgtg
     6181 gatgaacccg ttttgtgtgg tcgttgctca ggggattgcc ggcgttccgg tgctttctgg
     6241 ctccgggttg cgcatcgtgg tgtgggttat cgccactatg attggcctga tctttaccat
     6301 ggtgtacgcc tcacgagtga aaaagaatcc tcttctgtca cgcgtgcatg agtccgaccg
     6361 cttctttcgt gaaaagcagg cggatgttga acaacgtccg tttacctttg gtgactggct
     6421 ggtattgatt gtcctgaccg ccgtaatggt ctgggtgatt tggggcgtga tcgttaatgc
     6481 ctggtttatt ccagaaattg ccagccagtt cttcaccatg ggtctggtga ttggcatcat
     6541 cggcgttgtt ttccgcctta acggcatgac ggttaatacc atggcttcat cctttaccga
     6601 aggggcgcga atgatgatcg cccctgccct gctggtgggt ttcgccaaag ggattttgct
     6661 gctggtcggt aatggtgaag cgggtgatgc cagcgtgtta aataccatcc tcaacagcat
     6721 tgccaatgcc attagcggtc tggacaacgc ggtcgcggcc tggtttatgt tgctcttcca
     6781 ggcggtattt aatttcttcg tgacgtccgg ttctggtcag gcggcgttaa ccatgccgtt
     6841 actggcaccg cttggcgatc tggtcggtgt taaccgtcag attaccgtgc tggcattcca
     6901 gtttggtgat ggcttcagtc acatcattta cccaacctca gcttcgttaa tggcaactct
     6961 cggtgtgtgc agggtggact tccgtaactg gctgaaggtg ggcgcgaccc tacttggact
     7021 gctgtttatt atgtccagcg tcgtagtgat cggcgctcag ttgatgggct accactaaaa
     7081 atgttaagag ccgcaattgc ggctcttttt tcattctgcc gtttcagtct ctacggcttc
     7141 atttttggca ttgcgcttca tccacaacgc cagcgctttc agcgagtctg gagtgaactc
     7201 atcgcagcgt gcggtgattt cttccggcgt cagccagcaa acttcactga cttcatcttc
     7261 ctgtagggcg aagggaccgt gagagacgca gctgaacaac gcgccccaga cacggcaatt
     7321 tttatcttcg aaatagaact gcccgtgctc ggcaaagggg acaccggcaa tgcccaactc
     7381 ttcttccgct tcgcgacgcg cggattccag cagttgctca tcggcctgaa ccacaccgcc
     7441 tgcggtcgca tctaacatgc cgggtaaaaa gtcttttgtc tcggtacgac gctggaccag
     7501 aattttgccc atgccatcat gcacgacgat gtaagttgca cgatgacgca gacactgtgc
     7561 ccgcatttgt tcccggctgg cttgtgcaat gacttcgttc tcttcattga caatatccac
     7621 ccattcagta cttgccaaac gacgctgttc cattatcagg aaaccttctt tttctggcgc
     7681 tcttacggcg cattttgagt tgtgggtaaa ttacggatta atcgcgacct gcgcaatgat
     7741 actttgatca ttgagtgcga ttacactaag tacgtcatta tccagcatgc cataactcgc
     7801 cggattaccg cctttcggaa tactcaccga gccggggttg aagtggaaaa tctccccccg
     7861 ctgttctgcc actggcagat gggtatgacc gtacaccagc acatcgttct ggtttaaagc
     7921 aggtagattt tccgggccaa aaagatgacc atgcgtcaaa aacagacgtt gtttttccag
     7981 taatacctgt tgccacggcg cggttatcgg gaaatgcagc agcatttgat ccacttcgct
     8041 gtcgcagttg ccgcgcacag cgataacctt atgtgccact tcattaagcc gttcagcgac
     8101 tttggctggc gcgtaaccct ccggtaaagc attacgcggg ccgtgattca acacgtcgcc
     8161 aaggatcacc agccactggg caccgctttg ggcaaacaac tccagaacac gttccgtcgc
     8221 cggtaacgac ccatgaatgt ccgatgcaaa catcagtttc atcactcact cctcgtcgaa
     8281 aaaacgtaag ctatgatact ggattctgtc gttgctatca gccagattgc ttcgccgaaa
     8341 gtgcaataaa acgctggaca gacgctcgct gccactggaa tgtcgcataa tccaccaggc
     8401 gttctggcac ctcatcgcca tgtagtacca ggcggttaat cattagcgcc agatcagtat
     8461 cagcaatgca ccattcacca aataaattcg gctgacccag tgctaacaaa tgttctgcca
     8521 tcgcgacact ggcttttccc tcggccgtta gtggcgcttt tttcgccccc gcaaagacaa
     8581 catccgtcgg acgctcttcg cggatgggca tcagatcgct gcgcagccag gcctgaatct
     8641 gtcgtgcacg cgcacgattt tctaaatcaa gcggataaat acgttcccag gtcggtggcg
     8701 caaatcgatc ttccagatac tccgcaatgg cagaagattc actcaactca aaatcatcga
     8761 tttgtaataa cggcacacgg cgtgtctgac cgtaaccttg ccacgtcggc tgcaaatgtt
     8821 caccgctgtc gaggtcgatg gtcttgatat gaaacgacag gcctttttcc tgcaacgcca
     8881 cccaagcgga taacacataa ggggagaaaa agtgggcatc tgaccaaagc gtgatagcgg
     8941 gtttactcat tatgtcctcg gcaataaagg aggctggcta tcaaactata gagccttttt
     9001 gtcactgtca cgtgacgaat actcacgtaa gtcgccgcgc tttctatact tgtggtgttc
     9061 agatgattaa acaaccggag ctgcaatgat cgatctctat ttcgccccga cacccaatgg
     9121 tcacaaaatt acgctgtttc tcgaagaagc agagcttgat tatcgcttga ttaaggtaga
     9181 cctggggaaa ggcggtcagt ttcgtccgga atttttgcgc atttcgccca acaacaaaat
     9241 tccggcaatt gttgatcatt ctcctgccga tggcggcgaa ccgctaagcc tctttgaatc
     9301 tggtgccatt ttgttgtatc tggctgagaa aacggggctc tttttgagtc atgaaacgcg
     9361 tgaacgcgcc gccacattac agtggttatt ctggcaggta ggcgaactgg ggccgatgct
     9421 tgggcaaaat catcatttta atcacgcagc cccccaaacc attccttacg ctattgaacg
     9481 ttatcaggtt gaaactcagc gtctttacca tgtactaaac aagcggctgg aaaactcgcc
     9541 ctggctggga ggcgagaact acagcattgc ggatattgcc tgctggccgt gggttaatgc
     9601 ctggactcgc cagcgaattg acctcacaat gtatccggca gtcaagaact ggcatgagcg
     9661 gatccgttcg cgccctgcca ccgggcaggc actgctaaaa gcacaactcg gtgatgagcg
     9721 ttcggatagt taacagaaac aggttctcgt gtattatttc atcctaagta aaacaacgga
     9781 gaacctgcaa tggcacaacc tgccgctatt attcgtataa agaaccttcg tttacgtacg
     9841 tttatcggaa ttaaggaaga agaaattaac aaccgtcagg atattgttat caatgtgacg
     9901 atccactacc ccgccgataa agcgcgcact agcgaagata tcaacgatgc gctgaattat
     9961 cgcaccgtaa cgaaaaacat tattcagcat gtagagaata accgtttctc tttgttggaa
    10021 aaattaactc aggatgtgct cgatatcgca cgtgaacatc actgggtgac gtatgctgaa
    10081 gtggagatcg ataaactgca cgcgctgcgc tacgccgatt cggtatccat gaccttaagc
    10141 tggcagcgtt aaccgccata tcgggaggct gcatgaacat agtgatcacc ggagggacgg
    10201 gattaattgg tcgccatttg attccgcgtt tgctggagct gggccatcaa atcacggtag
    10261 tgacgcgtaa cccacagaaa gccagttccg ttctcggccc tcgggtgacg ctatggcaag
    10321 ggctagccga tcaaagcaac ctcaacggcg ttgatgcggt aatcaacctg gccggagaac
    10381 cgattgctga taaacgctgg actcacgagc aaaaagagcg tctctgccaa agccgctgga
    10441 atatcacgca aaaactggtc gatttgatta atgccagcga cacgccgccg tcggtactca
    10501 tttccggctc ggcaacgggc tattatggcg acttaggtga agtggtggtt accgaagagg
    10561 aaccgccgca taacgaattt actcataaac tctgcgcccg ctgggaagag attgcctgcc
    10621 gggcgcaaag tgacaaaacg cgagtgtgcc tgctgcgaac cggcgtggta ctggcaccgg
    10681 acggcggtat tctcggtaaa atgctgccac cgtttcgtct tggcctgggc gggccgattg
    10741 actctggtcg gcagtatctg gcctggattc atattgatga tatggtcaac ggtattctct
    10801 ggctgctgga taacgagctg cgcgggccat ttaatatggt ttcgccctac ccggtacgca
    10861 atgaacaatt tgcccatgcg ctcggtcacg cgctgcatcg cccggccatt ttgcgcgtcc
    10921 ccgcgaccgc cattcgactg ttaatgggcg aatcttcagt actggtatta ggtggacaac
    10981 gcgcgctgcc taaacggctg gaagaagcgg gttttgcgtt tcgctggtac gatttagaag
    11041 aggcgctggc ggatgtcgtt cgctgatgtg gtttacagca aacatccgcc agttaactcc
    11101 cggtgttaca ggattagtgg ctttgcgcga taagatcgtc tggtgaaagt cgggtcacca
    11161 tcataactaa ctctctgtct aaacctctat ccagcatctc ctgagcaata cgcagggctt
    11221 cttcgtgttt gccctgcatt gcgccttctt cacgtaatct gtcagcaatg gtcatcagtt
    11281 tctccttttc ttgtggtgcg cgttccgcta tctcaccaat aaatgcacga aaacgctggg
    11341 catcccctgt ttgtaatacg taattaaaca gggcttttag ctgtctgtca ttagtgttcc
    11401 ctgtaactag cagcgaaaca atttggtcga ctaatcccaa cagatcgcgc tgacgaatat
    11461 gtttctgaat taactccaac agcgccattt tgcggtgttg cataatctcg tcatccggca
    11521 ccacggtaat atccaccaac ggaaacgctg atgaatatat tttgcgggct atagcaggct
    11581 cggcaaattc atcaagccag cagagtgaat aaggataagg acttctgcaa ccatgataaa
    11641 acagcatcgg gatcaccaat ggaagctctt tatagcccgc
//
LOCUS       DAJVUK010000136        11629 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.136, whole genome shotgun sequence.
ACCESSION   DAJVUK010000136 DAJVUK010000000
VERSION     DAJVUK010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11629
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.136"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(50..1036)
                     /locus_tag="OQQ57_003311"
                     /pseudo
     CDS             complement(50..1036)
                     /locus_tag="OQQ57_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310582.1"
                     /note="PtrB; oligopeptidase that cleaves peptide bonds
                     following arginine and lysine residues; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
     gene            complement(1245..1904)
                     /locus_tag="OQQ57_003312"
     CDS             complement(1245..1904)
                     /locus_tag="OQQ57_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HCS1957967.1"
                     /translation="MANWLNQLQSLLGQSSSSISSSADQGLGKLLVPGALGGLAGLLV
                     ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
                     ERLILALVFAAKSDGHIDAKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA
                     E"
     gene            complement(2231..2587)
                     /locus_tag="OQQ57_003313"
     CDS             complement(2231..2587)
                     /locus_tag="OQQ57_003313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HCS1957968.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
     gene            complement(2654..2948)
                     /gene="yebG"
                     /locus_tag="OQQ57_003314"
                     /pseudo
     CDS             complement(2654..2948)
                     /gene="yebG"
                     /locus_tag="OQQ57_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
     gene            3082..4260
                     /gene="purT"
                     /locus_tag="OQQ57_003315"
     CDS             3082..4260
                     /gene="purT"
                     /locus_tag="OQQ57_003315"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HCS1957969.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEERLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCSDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
                     VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG
                     "
     gene            complement(4316..4957)
                     /gene="kdgA"
                     /locus_tag="OQQ57_003316"
                     /gene_synonym="eda"
     CDS             complement(4316..4957)
                     /gene="kdgA"
                     /locus_tag="OQQ57_003316"
                     /gene_synonym="eda"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HCS1957970.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(4994..6805)
                     /gene="edd"
                     /locus_tag="OQQ57_003317"
     CDS             complement(4994..6805)
                     /gene="edd"
                     /locus_tag="OQQ57_003317"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HCS1957971.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQSPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
                     DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            complement(7040..8515)
                     /gene="zwf"
                     /locus_tag="OQQ57_003318"
     CDS             complement(7040..8515)
                     /gene="zwf"
                     /locus_tag="OQQ57_003318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HCS1957972.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            8853..9722
                     /gene="hexR"
                     /locus_tag="OQQ57_003319"
                     /gene_synonym="yebK"
     CDS             8853..9722
                     /gene="hexR"
                     /locus_tag="OQQ57_003319"
                     /gene_synonym="yebK"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HCS1957973.1"
                     /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEA
                     NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
                     MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
                     DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
                     RFDKQLLNLSDDR"
     gene            9850..11292
                     /gene="pyk"
                     /locus_tag="OQQ57_003320"
     CDS             9850..11292
                     /gene="pyk"
                     /locus_tag="OQQ57_003320"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HCS1957974.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
     gene            complement(11352..11570)
                     /locus_tag="OQQ57_003321"
     CDS             complement(11352..11570)
                     /locus_tag="OQQ57_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957975.1"
                     /translation="MEYQADYYITINDSIKTWVQTQYSKDSGLPMAVIGHSVAEEAGM
                     RRLASYLDLHSGYPCIHFTGGCDYDWIE"
BASE COUNT         2823 a         2994 c         2902 g         2910 t
ORIGIN      
        1 ctgctcaaaa aagaacaaat ggtagtgtcc gctattgcca gtacacctca accagccagt
       61 cggtaaacag cgtaaaccct tccagcatga tgttttcgcg tggcggaatt aactcttccc
      121 actgttgctc atcacgcagg cgggtacggt ataagccaaa gtttttgccg tggcggttgg
      181 aacgcagata aaaccgatgc tggtagtgat caaggctgta ttcgtgatct ttgcggcgcg
      241 gcagaaaaac aaacggctcg gcatcggcca tttccgcgtc cagcaggcga acttcactgg
      301 tggtggcgct ggccaaatga atgactacat agtgcttcga ggtcgtttta tgcaggctga
      361 cgtaataggt atcgtctttt tcttcgtaga tcagtttatc ttgcgatgct ggcgtaccga
      421 tggcgtgacg ccagacctga taaggcagca gcgtcaccgg atgcttgcga acatagtaga
      481 aagtccagga gtcatttgcc cagacaaagc tgggttcaac gttatccagc agttccgggt
      541 accagttacc agtttccaga ttacgaaaac gaatgccgta ctggcgtcgg gaaagaaaat
      601 cttctgccag cgccataatg gtgttatcgg gcgtaatcgc cattccgccc atcgaataaa
      661 actcactatg agctgcgcgc ttattggcat cgagcaatgt ttcccactca tcccactctt
      721 cactgaatgc cgattgacgc tggtagatag catattcaca gcctggttca taaatatgcc
      781 gatagcggta gccatttttg atgtagggcg cagaaacttc tcgttgcgga atgcggtcga
      841 tgatttcttt taagatgcga tcctgcaagg cttgttgtga ggccatcacc cgatgaccgt
      901 aactattttc ttgttgcagg tagtccagga cttctggctg agaacgcgta tcgtcccgca
      961 gccagtagta attatcgatg cgcgtatcgc catgaagcgt catggcgtgg ggaatgcggg
     1021 cggcttttgg tagcatgtta ttgttctttc tggttgaaac atcttataag ggtggcaaaa
     1081 ctcaccgggg atgcaagcga aacaggggag tcattgctta gatgatgaca ggtaatggcg
     1141 cggatatcga atgttatgca gacagagaaa atcagcctgt tcaaatggct gtgcgattct
     1201 ggatagcccg aaatagtcaa cttcaggcta tccagagagc ggaattattc cgccaaagtg
     1261 cgtttttgct gttcgagatc gcgttcaatg ccgtcacgaa catcctgggg gattttcagc
     1321 gcgtcaccca gtgcattcag gtaactgcgt tccataaaat ggtcaatatc aatagccgcg
     1381 caactcagga aatagatttc cagcgcctct tcttcattgc ggaccccggt agccaagcgt
     1441 tgtggatcca gcggttgttc gattgcctgc tcaatgagta cacgcccctg ctcttccacg
     1501 ccggcttcac gcaattgctg gtcgattgcc gcacgttctt tggcatcaat atgaccatca
     1561 cttttagcgg caaagaccag cgcaaggatc aaacgttctg tacgctcatc cagcggcgta
     1621 ctttgcgcgc caaactgcgg ttcgtcctga tgcgccgcgc gaattttatc tttgtattta
     1681 ttccacagca ccgtacccgc taccgctccg ccgccaacca gtaacgcgtt ggtgccatat
     1741 ttcgtaagaa gtttacgtgc tgatttattt gcgaccagca gcccagccag tccgcctaat
     1801 gcgcctggca ctaacagttt gcccaatccc tgatccgcag acgaggagat agaagaactg
     1861 ctttgcccaa gcagggattg cagttgattt aaccagttag ccatatttgc tcctcaataa
     1921 ccatttttag tgcctgtagc atagcggatg aggatgtcag aaaatgtata tcgagacaaa
     1981 agatgcgcaa ataagcgggg cggtaggccg ttattcaaag aaattcgcgc caggtaaggt
     2041 atttactgta tatcaggtga taagggtatt ttaggtgaaa gtagtttgtc gttttgagtg
     2101 gcattgtttg atgctgattg cccgatgcga cgctgttgcg tcttctcagg cctacgattg
     2161 tggtgcgttc tggggcggac aaggcactcg cgccgcatcc gccaacggtc aatcgaatta
     2221 tcagaagcca ttaacgccgc tgatattccg ccattcccgc tttgcagtcc acgctgacct
     2281 ggtaatgaat atcggcactt ttaccacgca cggttagcgg tactgaccat ttatcatctt
     2341 taccctgaat gtcctgcaaa ctgacccaag ccacgggatc ggcctgaccg acaatttttt
     2401 gatcatctgc ccaacgcgcc acgcgatttt gttgataatc acgttttacg ctcgcggcaa
     2461 ttccggcagc atccagacct tcacactttg ggaaagtgac cgacttgctg gtttcattat
     2521 tggcagcgaa aactgatgcg caggcagaaa ccaacaacag ccctaaaaac gcccctcttt
     2581 ttttcatgtt tttctccata gcacaatgat tcaggagaaa gcatggtaca aattgtcagg
     2641 agcgcaagtt gcttcaggcc gcgtgtgagg catcttcctc ttcggattca gcaccgacga
     2701 cctgtgggtg gggacggtaa tttgccggtt ttcagaatgg tgctcagcac atctttttgt
     2761 tctgccagcc atagcgaaag ggcttcacgt tgctcgtctt ccatttgcac tggagaatta
     2821 gtcagccagg tgtcaagcag atccgccgta tcaagcattt tgtcataagc atcggcttcc
     2881 tttttgctgg taaacgacat tttctcttcg ccctcacgaa tgactacgta tttaacttca
     2941 accgccattt gcagcctctc ataataactg tgattttata cagtatattt cttttcggtt
     3001 gagaaatcaa aatcaacaat aaagacacac gcaaacgttt tcgtttatac tgcgcgcgga
     3061 attaatcagg ggatattcgt tatgacgtta ttaggcactg cgctgcgtcc ggcagcaact
     3121 cgcgtgatgt tattaggctc cggtgaactg ggtaaagaag tggcaatcga gtgtcagcgt
     3181 ctcggcgtag aggtgattgc cgtcgatcgc tatgccgacg caccagccat gcatgtcgcg
     3241 catcgctccc atgtcattaa tatgcttgat ggtgatgcat tacgccgtgt ggttgaactg
     3301 gaaaaaccac attatatcgt gccggagatc gaagctattg ccaccgatat gctgatccaa
     3361 cttgaagagg aaagactgaa tgttgtcccc tgcgctcgcg caacgaaatt aacgatgaat
     3421 cgcgagggta tccgtcgcct agcggcagaa gagctgcagc tgcccacttc cacttatcgt
     3481 tttgccgata gcgaaagcct tttccgcgag gcggttgctg acattggcta tccctgcatt
     3541 gtaaaaccgg tgatgagctc ttccggcaag gggcagacgt ttattcgttc tgcagagcaa
     3601 cttgctcagg catggaagta cgctcagcaa ggcggtcgcg ccggagcggg ccgcgtaatt
     3661 gttgaaggcg tcgttaagtt tgacttcgaa attaccttgc taaccgtcag cgcggtggat
     3721 ggcgtccatt tctgtgcacc ggtaggtcat cgccaggaag atggcgacta ccgtgaatcc
     3781 tggcaaccac agcaaatgag cccgcttgcc cttgaacgtg cgcaggagat tgcccgtaaa
     3841 gtggtgctgg cactgggcgg ttatggtctg tttggtgtcg agctgtttgt ctgtagtgat
     3901 gaggtgattt tcagtgaggt ctcccctcgt ccacatgata ccgggatggt gacgttaatt
     3961 tctcaagatc tttcagagtt tgccctgcat gtacgtgcct tcctcggact tccggttggc
     4021 gggatccgtc agtatggtcc tgcagcttct gccgttattc tgccacaact gaccagtcag
     4081 aatgtcacgt ttgataatgt gcagaatgcc gtaggcgcag atttgcagat tcgtttattt
     4141 ggtaagccgg aaattgatgg cagccgtcgt ctgggtgttg cgctggcgac cgctgagagt
     4201 gttgttgacg ccattgaacg cgcgaagcac gccgccggac aggtaaaagt acagggttaa
     4261 acccggcaaa aaaacgctac aaaaatgccc gatcgtagat cgggcgtttt gacttttaca
     4321 gcttagcgcc ttctacagct tcacgcgcca gcttagtaat gcggtcgtaa tcgcccgctt
     4381 ccagcgcatc tgccggaacc agccaggaac caccgatgca cagcacgctt ttcagcgcca
     4441 ggtagtcacg gtagttagcc ggagaaatac cacccgtcgg gcagaaacgg acctgggaga
     4501 acggacccgc gatcgcctgc agggctttca cgccgccgtt agcttcagcc gggaagaatt
     4561 tgaactcttt caaaccgtag tccataccca gcatcagttc ggaaacagtg ctgatccccg
     4621 gaattagagg aatagtccct tcggtagcag ctttcagcag cggctcggtc agacccgggc
     4681 taattgcgaa ctgtgcaccc gcttcagtga cttctgccag ctgctgtgga ttcagcaccg
     4741 taccggcacc cacaatcgct tcaggcactt ctttggcgat agcacggata gcgtcaactg
     4801 cacactcggt acgcagagtc acttccagaa cgcgcacccc accagcaacc aacgcttttg
     4861 ccatcggcac tgcgtgttcc agttttttta ccacgataac cggtacaacc gggccggtgg
     4921 tcaggattga ttctgcactt gttttccagt ttttcatcag agttttctct cgcctgatta
     4981 caaatttgtc gtcttaaaaa gtgatacagg ttgcgccctg ttcggcaccg gacagttttt
     5041 cacgcaaggc gctgaataat tcacgtcctg tccccacgcg tgacgcgctc aggtcaggaa
     5101 tgtgcggttc gcgagcagcc agttccgctt cgtctaccag cagcgtcagt tcgcctgtct
     5161 gtccattcac acgaatgatg tccccgtcgc gcacttttgc cagcagcccg ccatcgtagg
     5221 cttctggtgt tacgtggata gctgacggca ctttacctga agcgccggag agtcgtccat
     5281 cggtaactaa cgcaattttg aaacaccggt ccaataatac accaagtggc ggcatgagtt
     5341 tatgtaattc tggcattccg ttcgcttttg gcccctgatg acggacaaca acgacacaat
     5401 cgcggtccag caaacccgct tcaaaggccg gcataacgtc atgctggctt tcaaaaacaa
     5461 ccgctggcgc ttcaatcacc tggttctcaa ccggcacggc agaggttttc ataaccgcac
     5521 ggcccaggtt accgcttaac acttttgtcc caccatgatg agagaaaggt tgttcgaagg
     5581 aagcgatcac attgctgtcg agtgattttt ccgccccttc ccgccagtcc agttcaccat
     5641 tattcagcca tggttcaagg gtataacgag acagaccaaa gcctgccacc gtattgacat
     5701 cttcatgcag caggcctgct ttgagcagtt cacgcaccag aaccggtacg ccacctgccg
     5761 cctggaagtg gttaatatcg gccggaccgt tcgggtagag acgtgccatc agcggtacaa
     5821 catcagaaag gtcagagaag tcatcccagt taatctgaat accggccgcg cgcgccatcg
     5881 ccaccaggtg catggtgtgg ttagtggaac caccggtcgc cagcagtgca acgataccgt
     5941 tcaccaccac tttctcatcg atcatcttac cgatcggcat ccattcatta ccattaccgg
     6001 tcatgcgtgt aacctgacgc gcagcggcag cggtcaaagc atcgcgcagc ggagaatccg
     6061 gatgaacaaa agaagagcct ggcgactgca tccccataaa ttccaccacc atctggttgg
     6121 tgttggcagt accgtagaaa gtacatgttc ccggcgcatg gtaagacgcg gcttctgact
     6181 ccagtaaggc catgcggtcc actttacctt cggcataaag ctggcgaata cgcacttttt
     6241 ctttatttgg caaaccgctt gccatcggtc cagacggcac aaacaccgca ggcaaatgac
     6301 caaacgacag ggctgccatc gtcagacccg ggacaatctt gtcgcacaca ccgaggaaca
     6361 gagcaccatc aaacatgtta tgggacagcc ccaccgccgc agacatcgct atcacttcgc
     6421 ggcttagcag cgacaattcc attccatcct gcccctgggt gacaccatca cacatcgccg
     6481 gaacaccgcc cgcaacctga ccaaccgcat tcgcttcatg cagggcttta cgaatgattt
     6541 ctggatagtg ttcataaggc tggtgcgcgg agagcatgtc gttataggag gtgatgatgg
     6601 cgatattgtt acgcaacatg cttttcaaag aggctttgtc ttctggctgg caggcagcga
     6661 aaccgtgtgc caggttaccg catgccaact gcgaacgatg aacggtcgac gttttcgctt
     6721 gttctatccg ggcgagataa gcagagcgag tctcgcgcga acgttcaatg attcgatttg
     6781 ttacgcgtaa caattgtgga ttcataaagg ctcctgaaat tgagttgtca gagcaggatg
     6841 attcacaacg cgtttcattc agaggattta tgagtgaaac gcctgtaacc ggagctcata
     6901 gggcaaaaac gtttcagtca gtgtaataaa aaaagcctcg tgggtgaatc cgcacgaggc
     6961 ctgaaagtgt aaaaattgtt ctacaatctg tgcaagatca tgttaccggt aaaataacca
     7021 taaaggataa gcgcagatat tactcaaact cattccagga acgaccatca cgggtaatca
     7081 tcgccaccga ggcaacgggt ccccaggttc cggcctgata cggtttcggc gcatcattgt
     7141 ccatcgccca cgcctcagta atggagtcta cccatttcca ggcttcttcc acttcatcac
     7201 gacgtacaaa cagtgcctga ataccacgca tggtttccag cagcagacgt tcataggcat
     7261 ccgccagatg cgtctgatta aaggtttctg aatagctcag atccagcttg gtgatttgca
     7321 ggttatgttt gtggtcaagg ccaggaactt tattcagtac ctggatatcc acgccttcat
     7381 caggttgcag acggatagtc agtttattct gcggcagatc ctgccacgac tctttaaaca
     7441 gattcagttc aggtgttttg aaatagacca cgacttcaga acatttggtc ggcagacgtt
     7501 taccagtacg caggtagaat ggcacaccgg cccagcgcca gttatcaatg tcgacgcgga
     7561 tcgccacgaa ggtttctgta ttgctgctct tgttcgcacc ctcttcttcc agatatcccg
     7621 gcactttttt gccctgggcg aagcccgcag tatattgccc acgtacggtt ttttcgcgta
     7681 cgttggagcg gtcgatgcgg cgcagggact tcagtacttt cactttttca tcgcggatgc
     7741 tgtctgcgct caggtcagat ggcggagaca tcgcaatcat gcagagaatt tgtagcaggt
     7801 ggttctgaat catgtcacgc atctgaccgg ctttatcaaa atagccccag cgcccttcga
     7861 tccccacttc ttctgccacg gtaatctcaa catgatcaat ggtgcgattg tcccagttat
     7921 tcacaaacag ggagttagca aaacgcagcg ccaacaggtt cagcaccgtt tctttaccaa
     7981 gatagtggtc gatacggtaa acctggcact cctcgaagta ttcgccaacc tgatcattga
     8041 tttcctgcga ggtcgccagc gacgtcccca gcggtttctc catgactacg cgtgccggtt
     8101 tagcattcag ttttgcctcg ccaagccctt tgcaaattgc gccaaaagtg ctgggcggca
     8161 tggcaaagta gttaatggtg atacgatttt tttgatccag catcgcgccg agacggttga
     8221 atgcagcagt gtcattgaca tcgagattac aaaaatccag acgtgcactc agggtgtccc
     8281 ataaaccttc atcaatggtt tctttcatga aagtttcgag cgcctcgcgg acaactttgg
     8341 tatatgccgc tttatcccag tcagcacgcc ctacgccgat aatccgggtg tccgggttga
     8401 gctgaccggc tttttccagt tgatacaggg aaggcagcaa tttacgacgc gcaaggtcgc
     8461 ctttcgcgcc gaaaatgacc aggtcacagg cctgggctgt ttgcgttacc gccatgtcat
     8521 tctccttaag ttaactaacc cggtacttaa gccagggtat acttgtaatt ttcttacggt
     8581 gcactgtact gcttttacga gcttgcgaaa actgtaaacg cttatccacc cgtgcgatta
     8641 cgggaaaagc gcgcaaagcg cggcaaaact gataaaaaaa tcatcgtttt ccattcggta
     8701 aaaatctgac actgatcatg ttatgaaaaa aaataacaac ttttttatct gcttttgtca
     8761 ttaacacggc acacaggcgt aatatctgac aaaactgcat ttcgatttct ttcagtgcgg
     8821 aaatcgtcat tacccgtgag tctctttaca tcatgaatat gctggaaaaa atccagtctc
     8881 agctggaaca tttgagcaaa tcagagcgca aagttgccga ggtcattctg gcttcgcccg
     8941 ataacgcgat ccattcgagt attgctgcta tggcactgga agccaatgtt agcgaaccga
     9001 cggtgaatcg tttctgtcgc agcatggaca cgcgcggttt tcctgatttt aaacttcatc
     9061 tggcacagag tctggcgaat ggcactccct atgttaatcg caatgtcaat gaagatgaca
     9121 gcgttgaatc atacacaggg aaaatatttg agtccgcaat ggcaacgctt gatcatgtcc
     9181 gtcattcact ggataaatct gccatcaacc gcgccgtcga cttgctcact caggcaaaaa
     9241 aaatcgcctt tttcggatta ggctcttcag ccgccgttgc ccacgatgcg atgaataagt
     9301 tctttcgttt taatgttccg gtggtgtact ccgatgatat cgtgctgcaa cgcatgagtt
     9361 gtatgaattg tagcgacgga gacgtggtgg tgctgatttc tcacactgga agaacaaaaa
     9421 atctggtcga gctggcgcag ctggctcgcg aaaacgacgc aatggtgatt gccctcacct
     9481 ctgcgggtac cccgctcgcc cgggaagcaa cgctggcaat taccctcgac gtaccggaag
     9541 atactgacat ttatatgccc atggtttctc gacttgcaca gctgaccgtg atagatgtgc
     9601 tggcgacagg atttactttg cgacgcggtg caaaattcag agataacttg aagcgggtca
     9661 aggaagcgct gaaggaatcg cgttttgata agcagttact taatttaagt gacgatcgct
     9721 aaaaacgact gtcactgtcc taatcttata cgacatccga atgagattaa tttatcgcca
     9781 tcgcggcgtt atttcattcg gatttcatgt tcaagcaaca cctggttgtt tcagtcaacg
     9841 gagtattaca tgtccagaag gcttcgcaga acaaaaatcg ttaccacgtt aggcccagca
     9901 acagatcgcg ataataatct tgaaaaagtt atcgcggcgg gtgccaacgt tgtacgtatg
     9961 aacttttctc acggctcgcc tgaagatcac aaaatgcgcg cggataaagt tcgtgagatt
    10021 gccgcaaaac tggggcgtca tgtggctatt ctgggtgacc tccaggggcc caaaatccgt
    10081 gtatccacct ttaaagaagg caaagttttc ctcaatattg gggataaatt cctgctcgac
    10141 gccaacctgg gtaaaggtga aggcgacaaa gaaaaagtcg gtatcgacta caaaggcctg
    10201 cctgctgacg tcgtgcctgg tgacatcctg ctgctggacg atggtcgcgt ccagttaaaa
    10261 gtactggaag ttcagggcat gaaagtgttc accgaagtca ccgtcggtgg tcccctctcc
    10321 aacaataaag gtatcaacaa acttggcggc ggtttgtcgg ctgaagcgct gaccgaaaaa
    10381 gacaaagcag acattaagac tgcggcgttg attggcgtag attacctggc tgtctccttc
    10441 ccacgctgtg gcgaagatct gaactatgcc cgtcgcctgg cacgcgatgc aggatgtgat
    10501 gcgaaaattg ttgccaaggt tgaacgtgcg gaagccgttt gcagccagga tgcaatggat
    10561 gacatcatcc tcgcctctga cgtggtaatg gttgcacgtg gcgacctcgg tgtggaaatt
    10621 ggcgacccgg aactggtcgg cattcagaaa gcgttgatcc gtcgtgcgcg tcagctaaac
    10681 cgagcggtaa tcacggcgac ccagatgatg gagtcaatga ttactaaccc gatgccgacg
    10741 cgtgcagaag tcatggacgt agcaaacgcc gttctggatg gtactgacgc tgtgatgctg
    10801 tctgcagaaa ctgccgcagg gcagtatccg tcagaaactg ttgcagccat ggcgcgcgtt
    10861 tgcctgggtg cggaaaaaat cccgagcatc aacgtttcta aacaccgtct ggacgttcag
    10921 ttcgacaatg tggaagaagc tattgccatg tcagcaatgt acgcagctaa ccacctgaaa
    10981 ggcgttacgg cgattattac catgaccgaa tcgggtcgta ccgcgctgat gacctcccgt
    11041 atcagctctg gtctaccaat tttcgccatg tcgcgccatg aacgtacgct gaacctgact
    11101 gctctctatc gtggcgttac gccggtgcac tttgatagcg ctaatgacgg cgtagcagct
    11161 gccagcgaag cggttaatct gctgcgcgat aaaggttact tgatgtctgg tgacctggtg
    11221 attgtcaccc agggcgacgt gatgagtacc gtgggttcta ctaataccac gcgtatttta
    11281 acggtagagt aatctcacct gccccggccg ctgatggccg gggtatttag caacacataa
    11341 attaggacta cttattcaat ccaatcataa tcacagcccc ctgtaaaatg aatacaggga
    11401 tagcctgaat ggagatctaa atagcttgca agacgtcgca tacccgcttc ctctgcaaca
    11461 ctatgtccaa taactgccat cggtaagcca ctatctttgg agtattgtgt ctgcacccat
    11521 gttttaattg aatcgttaat cgtaatataa taatcagcct gatattccat atattgtatt
    11581 ggatcacaaa aacagcctgc cccaatgcca acagttctga ctactctgg
//
LOCUS       DAJVUK010000137        11405 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.137, whole genome shotgun sequence.
ACCESSION   DAJVUK010000137 DAJVUK010000000
VERSION     DAJVUK010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11405
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.137"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..921
                     /gene="gap"
                     /locus_tag="OQQ57_003322"
     CDS             <1..921
                     /gene="gap"
                     /locus_tag="OQQ57_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HCS1957976.1"
                     /translation="DVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKS
                     IAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTI
                     VYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVD
                     GPRGKDLRASRAAAENIIPHTTGAAKAIGLEIPELSGKLKGHAQRVPVKTGSVTELVS
                     ILGKKATAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGD
                     LQLVKTVAWYDNEYGFVTQLIRTLEKFAKL"
     gene            complement(963..2403)
                     /gene="aldA"
                     /locus_tag="OQQ57_003323"
                     /pseudo
     CDS             complement(963..2403)
                     /gene="aldA"
                     /locus_tag="OQQ57_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310048.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(2558..3400)
                     /locus_tag="OQQ57_003324"
     CDS             complement(2558..3400)
                     /locus_tag="OQQ57_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001027928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HCS1957977.1"
                     /translation="MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRSTM
                     ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPR
                     LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLV
                     CKRA"
     gene            complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="OQQ57_003325"
     CDS             complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="OQQ57_003325"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HCS1957978.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ
                     AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVLGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            7775..8380
                     /gene="azoR"
                     /locus_tag="OQQ57_003326"
     CDS             7775..8380
                     /gene="azoR"
                     /locus_tag="OQQ57_003326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HCS1957979.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(8431..9747)
                     /locus_tag="OQQ57_003327"
     CDS             complement(8431..9747)
                     /locus_tag="OQQ57_003327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HCS1957980.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCG
                     FLLYPLKFSFIRPEVSGVTGWPFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAER
                     WRKVCGGWFLLISISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGAGSCIVLMELMVMIQLWWPVWLCWPVLSLLIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDHKAMLKLWENR"
     gene            complement(9737..11405)
                     /locus_tag="OQQ57_003328"
                     /pseudo
     CDS             complement(9737..11405)
                     /locus_tag="OQQ57_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415928.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
BASE COUNT         2846 a         3096 c         2710 g         2753 t
ORIGIN      
        1 gacgttgtcg ctattaatga tctcacttcc ccaaaaattc tcgcctacct gctgaaacat
       61 gattcaaact acggaccatt cccctggagc gttgatttta cggaagattc acttatcgtt
      121 gatgggaaaa gtatcgcggt ttacgccgaa aaagaggcta aaaatattcc gtggaaagcg
      181 aaaggtgcag aaatcattgt cgaatgtact ggcttttata cctccgccga gaaatcgcag
      241 gcgcatcttg atgctggtgc gaagaaggtg ttgatttccg cccctgccgg tgaaatgaaa
      301 actatcgttt ataacgtcaa tgacgacact ctggatggca acgacaccat tgtttccgtg
      361 gcgtcatgca ccactaactg tcttgcgccg atggccaaag ccttgcatga cagtttcggg
      421 atagaagtcg gcacgatgac gaccattcat gcctatactg gcacccagtc actggtggat
      481 ggcccacgtg gtaaagattt acgtgcttca cgcgcagcgg cagaaaatat cattccccac
      541 actacggggg cggcaaaagc cattggtctg gagatcccgg aactgagcgg caaactgaaa
      601 ggtcatgcgc aacgcgtgcc ggtgaaaaca ggttcggtca ctgaactggt atcgattctc
      661 ggaaaaaaag cgactgccga agaggtgaat aacgcactta aacaagcaac caccaataac
      721 gagtcatttg gttataccga tgaagaaata gtctcttccg atatcattgg cagccatttc
      781 ggttcggtgt ttgatgccac gcaaacggaa attaccgccg tgggcgattt acaactggtg
      841 aaaacggtcg cctggtacga taacgaatat ggcttcgtca cgcagcttat tcgcaccctc
      901 gaaaaattcg ctaaactctg acgcgcacag gcggaggaaa aaacctccgc ctcttttact
      961 cattacgact gtaaataaac cacctgggtc tgcagatatt catgcaggcc atgtttacca
     1021 tctgcgccgc caataccgga tttacgccat ccggcgtgga agccttgcat agcttcgaag
     1081 ttttcacggt tgatgtaagt ttcaccaaac ttcagccctt taatggcttt catcgcgacg
     1141 ttcagatttt gggtatagat ttgatgaggt caggccgtaa tcactgtcat tagccattga
     1201 gatagcctct tccagcgtgt caaatgcgac caccggcaga accgggccaa aggtttcctc
     1261 atgcataatc gacatttcct ggcgaacatc cagcagcaat gtcggcggat aataatatcc
     1321 tttcccctct accgctttgc cacccaacgc cactctcgcc ccttcttcta ctgcgcgcgc
     1381 cactttttgc tcaacccttt ccaacgccgc ggcgttaatc aacggcccca tcgcaatgtc
     1441 gttgcgttca gcggggttac caaattgaac cgcctgcatc gcttcaccca gccgattgac
     1501 gaactgatca taaatgcctt tctgtacata aacacgttct gcacagttac acacttgccc
     1561 actattaatg acgcgtgaat caacgatggc tttgactgcc agttcaagat cggcatcgtc
     1621 cattacgata gctggtgctt taccccccaa ttccagacac actttggtga tgtttttcgc
     1681 cgcagtcgcc atgatcttct cacctgcaga gacgctgcct gtcatactga ccattgcgac
     1741 ctttgggtta cccgccagtt cttgcccaac ggtttcacca cgccccagta caaggttaaa
     1801 cacgccgcgc ggaaggccta tttcatcgac gattttggcg aatgcaatcg cattgtttgg
     1861 cgtaaattca ctaggtttaa tgacgatggt attaccggtc aaaagagcgg gagccatttt
     1921 gcgggcaatg aggaagaacg ggaagttcca cggcagaatg ccggtagtca caccaagcgc
     1981 acgtttaaac aaaagaatat tttctcctgg acgatcgctt tgaataatct cgccctcgta
     2041 acgccgtgcc cactccgcca tgtaatcgat atagtcggca gtaaaagcca cttcgacttc
     2101 agccagctgc tggatcttgc ccccttcttc aacaatcagc gcactgattt cactggcgcg
     2161 ttcgcggatc ccggcggaga ttttgcgcaa ccaactggcg cgttcaatag caggcaacgc
     2221 ttcccattct ggttgtgcac gttctgctgc atcgattgcc ttacgggcat cctcggcctg
     2281 accatcgggt atgcgggaaa tgacagcctc tgtagcaggg tttaccacat caatccatgc
     2341 gtctccacgc caggtaacaa actgtccatc gatatacata ggatgttgaa cgggtactga
     2401 catgggcgac tcctgtgatt tatatgtttg ttcttggtaa atacattgtt aattaacatc
     2461 aatcatcata gagacggcat cgtgaaagga caattctgtg aagggcttca taaaaacaag
     2521 tgtaaaagga ataaaaggca gaaataaaag tcaggagtca tgcccgtttg caaacaagtg
     2581 gttcacaaac gggcaatttt tgacgtaacg agcgactttc catcgcctcg atgagcaccg
     2641 catcgtgttt aagcgtttgc catgcatgga tgacttctgc cggaaaatca acgtgaacga
     2701 taaaatctcg cccgcgggga ccgtagccat cgctatcatc gcgtaaacgc ggcagctcgc
     2761 cagtgagtag tgagagataa cgctcaaccg gccataatcc ttgtaactga ttaataaaga
     2821 ttacactgtc tgcgttattt cctaactgag gaacgaatcc gggataactt aaccagcgtg
     2881 gtgcatcggg attgtcccca gtcatacggc ggaacgtcgc catcgtgctc cgctgcatgg
     2941 tggggtcctg aacaacgata gccgtatgaa ctcgttctac ggcctgatta aatagcgcga
     3001 tgctaaagcg tgcgttttca ccgcagtttg ttgactggtc ttcaatccag attttttcat
     3061 gcggaatgtg ccagaactga tgagcgatat ccgccaggat ggtcgcttct gctctgccag
     3121 tggtgcggat agtgttgtag tgcggatgct gtgcgatggc gctatacaaa aaagttgtcg
     3181 agtgaccgat accaccacta atcagtaaag gaatttgctg atcgcgagca atcttacatg
     3241 ccgcgtcgat agtcggcata accgcattgc ctgcaaggat cacgcaatcg gcctgatacg
     3301 gcacctcacc ggagaaatca tcctgcgcca gccactgtcc gataacattt atggcatcta
     3361 tagttgccgg cgaaagcgtc ggaaacgggg taatgttcat ggttcctcct tatcgttccc
     3421 ttaagaatac tgcgtgagat aatagtgaga agctgagcac tctgaaagga ggaagtcgta
     3481 tgtccttaac cgccactccg caagcctgac atatctttta aggaaatgct gtagataaac
     3541 attattcatc ttgcagcaga gaattgtatt tttctgaatt cctgaatttt tacccttacc
     3601 gttttagaat taataaaaaa cccggcgcta aatgcttacc gggttttaga tttattaggc
     3661 aaatagcagg gttaaccgct aatctgctcc atcgcctgca aaatacgctt atctgaaatc
     3721 ggataaggcg taccaagttg ttgagcgaag taactaacgc gcagctcttc tatcatccaa
     3781 cggatctctt tcacgtcttc atcctcacga cgtgcaggcg gcagtttgtt gatccattgc
     3841 tgccacgcct gctggacgtt ttcgactttc agcatctgtg cacgatcgcg atgtggatca
     3901 accgccagtt tttccagtcg tttttcaatc gcctgcaaat atcgcagcgt gtcgcccagc
     3961 cgtttgaagc cgttaccagt gacaaaaccg cgatatacca acccgcccat ctgcgcttta
     4021 atgtcagaaa gccccagtgc catggtcata tccacccgcc ctttcagacg tttgttgata
     4081 ttgaacactg ccgtaagaat ttgctcgacc tgcttcgcaa tatctaccac cgtgtcgttc
     4141 agttcggcac gcactttctc atgcagcgca gcaaagcctt cttccgtcca gaccgggcca
     4201 ccattggcgt cgatcagttg atccacaccg caggagatac agtcgtcgat cagctccagc
     4261 actttgccat acgggttgaa gtacagtccc agcttggctt tgttcggtaa cttttcatgt
     4321 aaatacttga tcggcgaggg aatatttagc agcagtagac ggcgaagacc attccacatt
     4381 gcctgttttt gctccagcgg gttatcaaac agtttgatcg ccacgctgtc gcgttcatcc
     4441 accagcgccg gccacgcctt cactttatag ttgccacgct tctgttcgta actttccggc
     4501 agctgaccaa aactccagat atgtaagccg ctctgctcga taccgtcatc cgccaccgcg
     4561 gacagcgttt cctgcacttt gcctttcagc gcatctttca gatcttgtag cgagcgccct
     4621 tcttttagct tcttgttttt gtcatccacc acgcggaagg tgattttcag gtgatcgggc
     4681 acctgatccc agtgccagtc ttcgcggtca acggtaacgc cggtcatccg ccgtaactcg
     4741 cgctcaaggc tgtcgagcaa cggtaactcc agcggtgtga cgcggcctaa aaacgcttcg
     4801 gcgtagtttg gtgcaggcac aaaattacgg cgtaccggtt tcggcaacga tttaatcaga
     4861 gcaatcacca attcgcggcg cagaccgggg atctgccatt caaacccgct ttcctcaacc
     4921 tggttaagta acggcagcgg aatatgtacg gtcacaccgt ccgcgtctgc gcctggctca
     4981 aactgatagc tcaaacgcag cttgagattg ccctgatgcc agaagttcgg gtaatccagc
     5041 ttgctgattt tttccgcccc ttctttgatc aacatgctct tttcaaagtt gagcaaatca
     5101 ggcgtttcgc ggctgacttt tttccaccag ctatcgaagt gacgagcgga gattacatcg
     5161 tggctgatgc gctggtcgta gaactcaaac agcgtttcgt catcaaccag aatatcgcgg
     5221 cgacgtgatt tgtgttccag ctcttccact tcggcccgca gtttcaggtt ttcacggaag
     5281 aatgcgtgac gcgtctgcca gtcaccttcc accagcgcat ggcgaataaa gagttcacga
     5341 cataacgccg gatcgatctg gctgtagttg accttgcgcg cggcaacaat cggcaaacca
     5401 taaacagtga ctttttccgt tgccatcacc gcgccctgcg cccgttccca gtgcggttcg
     5461 ctgtaggtac gtttaatcaa atgctgagcg acaggctcca cccattccgg gtcgatacgc
     5521 gcagcaatgc gcccccacag gcggctggtt tctaccagtt ccgccaccat tacccatttc
     5581 ggcggttttt tgaataaacc agaaccgggg aagatggaga aacgcgcgtt acgtgcgccg
     5641 gtatattctt gtttatcggc atctttcatg ccgatatggg aaagtaaacc cgtcagcaac
     5701 gcaatgtgaa tttcgcgata ctccgccggt tcgctgttaa ccggaatgcc aagttctttc
     5761 accacctgac gcaactgggt gtagatatcc tgccattcgc gcacgcgcag atagttgaga
     5821 taatcggtac gacacaggcg acggaaggcg tttgaagaaa gcgccttttg ctgctcgcca
     5881 agataattcc acagatttac aaacgcgagg aagtcggatt ctttgtcgtg gaagcgacga
     5941 tgtttttcgt ccgatgcctg ctgtttgtcc atcggccgct cacgcgggtc ctgaatggag
     6001 agcgcggacg tgataatcat cgcctcacgc acgcagccat gtttctgcgc ttccagcacc
     6061 atacgcgcca gacgaggatc gaccggcagt tgcgagagct ggcgaccgag cggcgtcagt
     6121 ttataggcgc tggcctgttc atccgtggtg atcgcgccca gttcttcgag cagacgcacg
     6181 ccatcctgga tattgcgttt atccggtgct tcgacaaacg ggaacgcagc gatatcgccc
     6241 agccccagcg cggtcatctg caaaataacc gaggccaggt tggtacgcag aatctccgga
     6301 tcggtaaact ccgggcgcga gaggaaatcg tcttcggaat agagacgaat acagatccct
     6361 tcggacacac gaccacaacg gcctttacgc tgattggcag acgcctgtga aatgggttca
     6421 atcggcaaac gctgcacttt ggtgcgatag ctgtagcggc tgatacgcgc cgtaccgggg
     6481 tcgataacgt atttaatccc cagtacagtc agcgaggttt ccgcgacgtt ggtcgccagc
     6541 acaatgcgtc gcccgctgtg cgactggaac acgcggttct gttcgctatt cgaaagccgc
     6601 gcataaagcg gcaagatttc ggtatggcgt aagttcagct tgttcagcgc atcggcggta
     6661 tcgcgaattt cccgctcgcc gctcataaag atcagaatgt cgccagggct ttcctggctc
     6721 agttcgtcta cggcgtcaaa aatcgcctgc aactgatcgc gctcggtgtc atcggcttct
     6781 tcaacaatcg ggcgatagcg cacttccacc ggataggtcc gaccggagac ttcgataatc
     6841 ggcgcattat taaagtggcg agaaaagcgt tccgggtcga tagtcccgga agtgataatg
     6901 atttttaggt caggacgccg cggcagcaac tctttcaaat agccgagcag aaaatcgata
     6961 ttcaggctgc gttcgtgtgc ttcgtcaata atgatggtgt cgtactgcat cagcaggcgg
     7021 tcttgctgga tctccgccag caggataccg tcggtcatca gcttgaccat cgtgttatca
     7081 cttacgtgat cgctgaaacg cactttgtaa ccgatgcaac cgcctggctc cgttttcagc
     7141 tcttccgcaa tacggttcgc caccgttctt gccgccagac gacgcggctg ggtatggccg
     7201 atcagtcctt taatcccgcg ccccagctcc atacagattt tcggtagctg ggtcgtttta
     7261 ccggaaccgg tttccccggc gacgatcacc acctggtgat cacgaatcgc ttcgagaata
     7321 tcctgttttt tctgactaac tggcaaattg tccggataag tgatttccgg tcgtgccgct
     7381 tcacgcagca ggactttccc tgccgcctgg tcaatctctt tcgccatctc ctggaaaatg
     7441 gcctgttgtg catcaggatt tttaaccttc ttaacaccat gcagacggcg agaaaaacgc
     7501 agtctgtcgc gcagcatcaa cgaatccagc cgctgctgca aagcagtaaa ggtcaatttt
     7561 tgttgttctg tcataacgtt agtgggcagt agtctgcctg attaattttc ttttaaatga
     7621 tagatataga gtaccacatc gcggctttct atgcgttgtt caataaattc gaacataggc
     7681 ttcgatttat tgcgctatct ctgtggcagg attgtgaata aagtgtcagc aagcaacggg
     7741 gcatcgccaa ttcaaacatc tataaggaaa caccatgagc aaggtattag ttcttaaatc
     7801 cagcatcctg gcagggtact ctcagtctaa tcagttgtcc gattattttg ttgaacaatg
     7861 gcgcgaaaag cactccgctg atgaaatcac cgttcgcgac ctggctgcaa atccgattcc
     7921 ggtactggat ggcgaactgg ttggcgctct gcgtccgagc gatgcgccgc tgactccgcg
     7981 tcagcaggaa gctctggcgc tttccgatga gctgattgcc gagctgaaag cccacgacgt
     8041 tatcgttatt gcggcaccga tgtataactt caacatctca actcagttga aaaactattt
     8101 tgacctggtt gcacgcgcag gcgttacttt ccgctatacc gagaacggtc cggaaggtct
     8161 ggtaacgggt aaaaaagcca tcgttattac cagccgcggt gggatccaca aagatggacc
     8221 aacggaccta gtgacgccgt atctgtccac gttcctcggc tttatcggca ttaccgatgt
     8281 gaaatttgtc ttcgccgaag ggatcgcata cggtccggaa atggcagcga aagcgcagtc
     8341 tgacgcgaaa gcggccatcg acagcattgt tgctgcataa ccggacacga tcttgatgtg
     8401 gactgtagtt cagtccacat ctcaatccac ttacctgttt tcccataatt tcagcatcgc
     8461 tttgtgatct tccttaagca caatatgcga acgtctggct cgaatataac taatcgcttc
     8521 atcaacggtt ttacagtgtc cgtaacataa caaccatgcc gccactacca gcgcactgcg
     8581 cgataatccc aacgcgcaat ggaccagaac gctgccttgc tcttcgcgta atgtttccag
     8641 catcgccacg gcctgtcgga gctccccctc ttccggaacc accagatcca gcatcggtac
     8701 acagaaatag agtcgatctt ttgtcgctcg tccccgaggg aattcaaagg tgacgtccag
     8761 aaccgcattc tgtgccggaa tatgtcgtgg aaacgcccct aaataaacac cagcagtaat
     8821 tttgctcacc ggctccaggc gacgacaaaa ccaacgcata gacagccaca tcccgatgcg
     8881 ccagggcaat gtcagccagt aaacggcggg cgggagtttc ccctgactat ctttccctgt
     8941 tgttatcgcg ccaagcccac cgtacccacg gccaataatg agtagcgata atactggcca
     9001 acataaccag actggccacc ataactgaat catcaccatt agctccatca acacaatgca
     9061 cgagcccgcg cctacgacat atggcagtgc tattttgatt cgacgttgat caggtttctg
     9121 ataattccaa cgacgatcga cgggcaccat ccagtcaatc aacataccta ccgccagccc
     9181 tgtgatgaca tcaataaaat gatgctgcca ggtcgtcaga gtagaaatag agatgagtaa
     9241 aaaccatccg ccacagactt tacgccacct ctcagccaga tgctgacgaa agtgacgcca
     9301 aagtagccag cagagaataa tatgcagcga aggagactgg ttataaggca gatcaaacag
     9361 ttcaagttgc gaaaatggcc atcccgtcac cccactcact tcaggacgga taaaactaaa
     9421 cttcagcgga tagagcaaaa aaccgcagca ggccattacc gttgccagaa taagccggtg
     9481 gacaagtcgg cgctgttcga atgtcgtgct acaaacgaac agcgaaaatc catataaaag
     9541 atccagactc cagtaaggaa caatagtcca gggaagaaaa gggatcgccg tttcccaacc
     9601 gaatacctga ctggggatat catggctgtt aaggtcctga accgcggtga actgattaag
     9661 agatccatag gtgaagaaaa aaaacggggc cagcaacaat aaccagccag cgccttgtag
     9721 caatacgttc cgacgttcag ttatcacgac gcaccgccat cgaaaccgta aaaatacccc
     9781 actcatcaat ccgttgtgtg catttatcaa atccggcatc acgcacgagt gaatccatct
     9841 ccccttgcga acgcacgcgc attacccacg gtttaccatc tttatgactg gttaacaccc
     9901 cggcaatcat ctccagttga gggtgccacg gctgcccggt gtagatgaga atgccgaccg
     9961 gttcgatggc attggcaaga cctgcgagtg agttttttac ctgctcattt tcgggaaaaa
    10021 gctcatacag tccagagaca attgccagcg taggccgcgg agttaacgcg ctgagttcct
    10081 ccgggttaaa cgcatcgccc tgttcaaaac gcacccgccc agacattccc cgttgggcaa
    10141 tcatctcttg cccctgtgca acatttaact cgctgtaatc acgtaacaaa atatcgctta
    10201 cggcaggctc gtttgccagc gcatccagta catagcgccc atgccctgcg gcaatgtcaa
    10261 ccacgcggac ggctaaacct ttggcgtgga gatcggcaac ggcttgttta atcagtattt
    10321 gtaaatgggt tttgcgctgg cgaataccgc gccagccaac actgttcagg tagattttgt
    10381 cgattaagcg cccgaatgcg ttactacctt gcggttgatt ttgatagaca taatccagcg
    10441 aactgcctga atcaaagccg gtgctcattc cgagatgcag gcccgcagag tgcgtcccga
    10501 acaatttcat cgcctttcgc ataaagcgat acgctaaatc aaccggcgat aatagcacgg
    10561 gtccaccaga aagtagccgc cattgatccg ctgatggtcc tgtgcagtct tcatgctgat
    10621 aatcaaattt ttgcgatttg ttagcatata aacgactaat aaagctttgc attttttcaa
    10681 atgccagcgc cctgttctct tcacccaacg tgtcgtgata aaagcctggc agcagatgca
    10741 gctctttcag agggctacgt aatctctgat aaaaatcaat ctgcggttgg cgatgcacca
    10801 catagtcatc acctgatatc agaagttgcg tggggagcgt aatcgccgcc gcatctctaa
    10861 taatacgttc agacgtttta tagagatcga gcaagatatt gacggcaatc gcccgtgtga
    10921 tcagcggatc attattgaaa ctcgccaccc gttgccgatc gtgggtcaaa tagcgtcctt
    10981 tcacatagga attaataaaa aacagaccac gcagacgatg ccataacgcc agcgcaggac
    11041 gtgccagcgg cacatacaat ttaaccttaa aggccggaga agccagcacc agcccgcgaa
    11101 ttgcaggcgc ataatcatga acctatgtgg caaccagcac tgcgccgacg ctttgcgcga
    11161 tcacaaccac ctcttccagt ccaacctagc tgtcgctggc agcaaaacgg acaaattcat
    11221 cgacatcctg cactgaacgc gcaagagatg ggctataacc acgcggcccc gaagtttttc
    11281 catgcccccg agcatcccat gcataaaaag cagtatctgg catcgccagt tcatcaacga
    11341 tatgttgtag acgaccagaa tgttcatggc cacgatgaaa taagacaatg acctttttcg
    11401 cccct
//
LOCUS       DAJVUK010000138        11330 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.138, whole genome shotgun sequence.
ACCESSION   DAJVUK010000138 DAJVUK010000000
VERSION     DAJVUK010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11330
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.138"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            86..523
                     /locus_tag="OQQ57_003329"
     CDS             86..523
                     /locus_tag="OQQ57_003329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HCS1957981.1"
                     /translation="MKTIKPESIALFCLLSGDVDLAKHLADILPITCFVGEDWQQDFQ
                     PLDGGPVQSLSDSYSDYSVLLLIAAESEISVPEWLAHSEGTTVILIAEHNARLLTGPA
                     GGAVALIHYLNEICHSRETAVNDAFCRTLTRGSLAIPQCHLLS"
     gene            657..1201
                     /gene="cobU"
                     /locus_tag="OQQ57_003330"
                     /pseudo
     CDS             657..1201
                     /gene="cobU"
                     /locus_tag="OQQ57_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416497.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
     gene            1198..1941
                     /gene="cobS"
                     /locus_tag="OQQ57_003331"
     CDS             1198..1941
                     /gene="cobS"
                     /locus_tag="OQQ57_003331"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HCS1957982.1"
                     /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
                     GAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLE
                     IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILALLAAACAVSRGTAALLMYRH
                     RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL
                     LKRTLGGQTGDTLGAAIELGELVFLLALL"
     gene            1953..3032
                     /gene="cobT"
                     /locus_tag="OQQ57_003332"
     CDS             1953..3032
                     /gene="cobT"
                     /locus_tag="OQQ57_003332"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HCS1957983.1"
                     /translation="MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAI
                     QLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGGAISPKEVTAIQAENMTRGTTGVCVL
                     AAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYT
                     RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVV
                     RRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAAC
                     QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACA
                     IYNNMGELAASNIVLPGNTTSDLNS"
     gene            3094..4029
                     /gene="ldtA"
                     /locus_tag="OQQ57_003333"
     CDS             3094..4029
                     /gene="ldtA"
                     /locus_tag="OQQ57_003333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCS1957984.1"
                     /translation="MMRRVNIFCSFALLFASHTSLAVTYPLPPEGSRLVGQSYTVTVP
                     DHNTQPLETFAAQNGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYEFDRKVPLPVTPSLR
                     AFISGQEVDVNRANAALQRRSGMPVPISSGSRQMF"
     gene            complement(4085..4160)
                     /locus_tag="OQQ57_003334"
     tRNA            complement(4085..4160)
                     /locus_tag="OQQ57_003334"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4125..4127),aa:Asn,seq:gtt)
     gene            4487..4858
                     /locus_tag="OQQ57_003335"
                     /pseudo
     CDS             4487..4858
                     /locus_tag="OQQ57_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            4857..5291
                     /locus_tag="OQQ57_003336"
                     /pseudo
     CDS             4857..5291
                     /locus_tag="OQQ57_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310806.1"
                     /note="Catalyzes the hydrolysis of AMP to form adenine and
                     ribose 5-phosphate using water as the nucleophile;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
     gene            5634..6350
                     /locus_tag="OQQ57_003337"
     CDS             5634..6350
                     /locus_tag="OQQ57_003337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCS1957985.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(6806..6881)
                     /locus_tag="OQQ57_003338"
     tRNA            complement(6806..6881)
                     /locus_tag="OQQ57_003338"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6846..6848),aa:Asn,seq:gtt)
     gene            complement(6982..8625)
                     /gene="yeeO"
                     /locus_tag="OQQ57_003339"
     CDS             complement(6982..8625)
                     /gene="yeeO"
                     /locus_tag="OQQ57_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
                     /protein_id="HCS1957986.1"
                     /translation="MLRHILTAKNLLSNPIFKFPNCLPFLSTVCCICRQFVGENLCSF
                     ADSPSLFEMWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIF
                     MENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLG
                     KRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKVLALTYLEL
                     TVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFV
                     GAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVE
                     SVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVG
                     QIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALF
                     MPIWSASWGLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMF
                     ADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKPVVSE"
     gene            8630..8705
                     /locus_tag="OQQ57_003340"
     tRNA            8630..8705
                     /locus_tag="OQQ57_003340"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8663..8665,aa:Asn,seq:gtt)
     gene            8867..10129
                     /locus_tag="OQQ57_003341"
     CDS             8867..10129
                     /locus_tag="OQQ57_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1957987.1"
                     /translation="MSLNDSKIRNLKPSSKPVKLSDSHGLYLLVNQGGSRIWYLKYRF
                     SGKESRVSLGAYPLVSLAEARQRRDDIRKLLTQNINPAHQRMSDKAAASPEKYFKAVA
                     LAWHKTNKKWSPDYAARILASMENHIFPAIGHLPVTTLKTQNFTALLRVIEDKGFLEV
                     ASRTRQQLCNIMRYAVQQGFTENNLAQHLEGVTAPPVKNHYPALPLERLPELFERIGD
                     YQQGRQLTRLAVVLTLHLFIRSSELRFARWGEIDFRNKIWTIPATREAIEKVRFSGRG
                     AKMRTPYIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTVNRALRLMGYD
                     TKTDVCGHGFRTMACSALVETELWSRDTVERQMSHQERNSVRAAYIHRAEHLDARTAM
                     MQWWSDYLDVSREGYVAPYIYARRHKAA"
     gene            complement(10848..>11330)
                     /locus_tag="OQQ57_003342"
     CDS             complement(10848..>11330)
                     /locus_tag="OQQ57_003342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase domain-containing protein"
                     /protein_id="HCS1957988.1"
                     /translation="MAAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFG
                     TKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLIDKPDLKSAMKYWHSQASRLGLT
                     GTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD
                     "
BASE COUNT         3010 a         2646 c         2760 g         2914 t
ORIGIN      
        1 gggctgcatt caaggtgtgg caatattgtt tcatggctta tcaaccagag cgccattaca
       61 ggaaattaag tggagggcga gaggcatgaa aacgataaaa cccgaatcga tagctctttt
      121 ttgcctctta tctggagatg tggatctggc gaaacatctg gctgatatat tgccaataac
      181 ctgttttgtt ggtgaggact ggcagcaaga tttccagcct cttgatggtg ggcctgtgca
      241 atcgttatca gattcgtata gcgattattc agtgctgcta ttgatagcag ctgaaagcga
      301 gatatccgta ccagaatggc tcgctcattc tgagggaacg acggtaattt tgattgcaga
      361 acacaatgcc cgtttgctga ctggtccggc tggtggggct gtagcattaa tccattatct
      421 gaatgaaatc tgtcattcca gagaaaccgc tgtcaatgac gcattttgtc ggacgttaac
      481 acgaggaagt ctggctattc cgcaatgcca tcttctttcg taatggattg agaatgctgg
      541 atttttaatt atattacgcg cagtattaat cgcgtaaatg ttttgcggtc agcaacggtg
      601 ggggatccat tgttctgttc aatgaatacc atcatacaat tgaatcagga gtcggtatga
      661 tgatttcggt gacggggggc gtacggagcg ggaagagtcg ccacgcagag gcgcttattg
      721 gggactcttc acaggttctg tatacgccac ctcgcaaatc cttgatgatg agatggctgc
      781 acggatagaa catcatcggc aaggccgccc gacgcactgg cacacagtgg agcgctggca
      841 acatcttgat gaattaattc atgcagacat taacccgcat gaggctgtat tgctggaatg
      901 cgttaccacc atggtgacta atctgttgtt tgattatggc ggcgataaag accctgatga
      961 atgggattat caggcgatgg aacaggcgat taatgctgag attcagtcgt tgattgctgc
     1021 ctgccaacgt tgtcccgcaa aggttgtatt agtgactaac gaagtgggaa tggggattgt
     1081 gccggagagt cgtctggcac gacattttcg tgatattgcc gggcgggtaa atcagcagct
     1141 ggccgctgcg gcaaatgaag tatggttggt ggtttcgggt attggagtaa aaatcaaatg
     1201 agtaaattat tttgggcgat gctctctttt attacgcgtc tgcctgtacc gcgtcgctgg
     1261 tcccagggac tggatttcga gcattattct cgcggtatta ttacttttcc tttaattgga
     1321 ttattgcttg gcgcgattag cgggctggtc ttcatggtgc tgcaggcatg gtgtggcgta
     1381 ccactggcgg cactgtttag cgtacttgtg ctggcgctga tgaccggggg attccacctg
     1441 gacggcctcg ccgatacctg tgatggcgta ttttctgcac gtagccgcga tcgcatgttg
     1501 gaaatcatgc gtgatagccg tttaggcacc cacggcggtc tggcattgat ttttgttgta
     1561 ctggcaaaga ttctggtatt aagcgagttg gctctgcgtg gcgaaccgat ccttgcattg
     1621 ctggcggcag catgtgcggt cagccgcggg actgccgcat tattgatgta tcgtcatcgt
     1681 tatgcccggg aagaaggact tggcaatgtg ttcattggca aaattgatgg gcgacaaacc
     1741 tgcgtcacac tcggcttagc cgctattttt gctgccgtat tattgccggg tatgcatggt
     1801 gtggctgcta tggtggtgac gatggtggcg attttcatcc tcggtcagct tctcaaacgt
     1861 acgctgggcg ggcaaaccgg cgatacgctg ggagctgcta tagagcttgg tgaactggtc
     1921 ttcctgctgg cactgctata aagagacgtg acattcaaac acttgccgat ttactgaata
     1981 cgatccctgc tatcgatcct gccgctatgt cgcgtgcaca acggcatatc gacgggttac
     2041 tcaaacctgt tggtagcctg ggaaggctgg aggcgcttgc catacaactg gcaggaatgc
     2101 cggggttgaa tggcgttccg catgtgggca aaaaagcggt actggtcatg tgtgccgatc
     2161 acggcgtctg ggaggaaggg ggcgctattt ccccaaaaga agtgacagcc attcaggctg
     2221 aaaatatgac ccgcggaaca accggcgtgt gtgtgctggc agcacaagcg ggcgctaacg
     2281 tctacgtaat tgatgttggt attgatactg ctgagcctat ccccgggctt atcaacatgc
     2341 gtgttgctcg aggtagtggc aatattgctt cagctccggc aatgagtcgc catcaggcag
     2401 aaaagttgct tttggacgtc atatgttata cgcgggagct ggcaaaaaac ggtgttacgc
     2461 tgtttggtgt aggtgaactg gggatggcaa acacgacacc ggcagcggca atagtcagca
     2521 caatcactgg ccgggctcct gaagaagtgg ttgggattgg cgcaaacctg ccgacagata
     2581 aactggctaa taaaattgat gttgtgcgcc gggcgattac gttgaatcaa ccaaatccgc
     2641 aggatggcgt tgatgtcctg gcaaaagtgg gtggatttga tttggtcgga atggctggcg
     2701 tgatgttagg cgctgcgtcc tgcggtttac ccgtgttgct ggatggattt ctttcttatg
     2761 ctgctgcgct cgcagcctgt cagatgtctc ctgcaatcaa accgtatctc attccttctc
     2821 acctgtcggc agaaaaagga gcgcgtatag cgctgtcgca tttggggctg gagccttatc
     2881 tcaatatgga gatgcgttta ggtgagggga gtggcgcagc tctggcgatg cccatcatcg
     2941 aagctgcctg tgcgatatat aacaacatgg gcgaacttgc tgccagtaat attgttctac
     3001 cggggaatac gacttctgat ttgaacagtt aaaaacgaaa agtctgataa aagctatact
     3061 taacggatag ctttcgcgac ttaggaaagg gacatgatgc gtcgtgtaaa tattttttgc
     3121 tcatttgctc tgctttttgc cagccatact agcctggcgg taacttaccc attacctcca
     3181 gagggtagcc gtttagtggg gcagtcgtat actgtaactg ttcctgatca caatacccag
     3241 ccgctggaga cttttgccgc acaaaacggg caagggttaa gtaacatgct ggaagcgaac
     3301 ccgggtgctg atgttttctt gccgaagtcc ggctcgcaac tcaccattcc gcagcaactg
     3361 attttgcccg ccactgttcg taaagggatt gtggttaacg tcgctgagat gcgtctttat
     3421 tactacccac cagacagtaa tactgtggaa gtctttccta ttggtatcgg ccaggctggg
     3481 cgagaaaccc cgcgtaactg ggtgactacc gttgaacgta aacaagaagc tccaacctgg
     3541 acgccaacgc cgaacactcg gcgcgaatat gcgaaacgag gggagagttt gcccgcattt
     3601 gttcctgcgg gccccgataa tcccatgggg ctgtacgcga tttatattgg caggttgtat
     3661 gccatccatg gtaccaatgc caattttggt attgggctcc gggtaagtca gggctgtatt
     3721 cgtctgcgca atgacgatat caaatatctg tttgataatg ttcctgttgg gacgcgtgtg
     3781 caaattatcg accagccagt aaaatacacc actgaaccag atggctcgaa ctggctggaa
     3841 gttcatgagc cgttgtcgcg caatcgtgca gaatatgagt ttgaccgaaa agtgccattg
     3901 ccggtaaccc catctttgcg ggcgtttatc agcgggcaag aagttgatgt aaatcgcgca
     3961 aatgctgcgt tgcaacgtcg atcgggaatg cctgtgccaa ttagttctgg ttcaagacag
     4021 atgttttaag agcgttggta attagaaagc aaaaagcctg ctagaaagca ggcttttttg
     4081 aatttggctc ctctgactgg actcgaacca gtgacatacg gattaacagt ccgccgttct
     4141 accgactgaa ctacagagga atcgtgtgaa cggggcgcat attaatggca gtgcatggtg
     4201 atgtcaaagg gtgaaatgca tttttttgtt tgtttgctgt caatttcaac aaagtggtga
     4261 gctttcaatc ttattgggta atgaaccatc gtggtgcata ccctcctttt atagggcagg
     4321 ggaacgcgac agctgattaa aggagcaaat gacgaatcta tcataatctc ttatttgaca
     4381 gttggttagc ttgtacatca acgccaaaat aaaactggca agcatcttgc aatctggttg
     4441 taagtaatgg cggcacttgg gccgattctt aaaaaccgga ggcaacatga acttcagacg
     4501 cctgaaatac ttcgtaaaaa ttgtagatat tggtagcctg acccaggctg ctgaagtatt
     4561 gcatatcgca caaccagcgc tcagccagca ggttgccaca ctggaaggtg agttaaatca
     4621 acaacttttg atccgtacaa agcggggcgt tacgccaaca gacgccggaa aaattctcta
     4681 tacccatgcg cgggccattt tacgtcagtg tgaacaggcc caactggcgg tgcataacgt
     4741 tggtcaggca ttatcggggc aagtctcgat tggctttgca ccaggaaccg ctgcgtcatc
     4801 catcaccatg cccttattac aggcggttcg cgctgaattt ccggagatcg ttatctatcc
     4861 cgagcattgc tgaagtgcaa cgtgcgcttt atgacgccac caagctggtg agcggcaggc
     4921 ccggtgagga agtcaaacag cggctacgta ctggtactgt ggtaaccaca gatgacagga
     4981 actgggaatt acgttactca gcttctgcac ttcgttttaa cttaagccgg gccgtagcaa
     5041 ttgatatgga aagtgcaacc attgccgcgc aaggatatcg tttccgcgtg ccatacggga
     5101 cactactgtg tgtttcagat aaaccgttgc atggcgagat taaacttccc ggccaggcta
     5161 accgttttta tgaaggcgct atttccgaac atctgcaaat tggcattcgg gcgatcgatt
     5221 tgctgcgcgc agaaggcgac cgactgcatt cgcgtaaatt acgaaccttt aatgagccgc
     5281 cgttccgata ataagttctg aaccttctta tcagaaatag atgtgaagga gtaagtaaga
     5341 cacctggcaa atagcctgca ataatcgtgg gctgtttgct tccttgggcg gatacgtgtt
     5401 ttattatcgt cttaatgatt tccacatatt aaaagcaagt atgctttcaa aacacaatta
     5461 taaaaaatcc cgccaacaat ataagttttt ataaaattaa atataagatt atggctttag
     5521 aatattttta tttctaatag acgagatttt tcctgttatg atataatatg ccgaattaac
     5581 acatgttaac gatttaccag taatgtaaat aaattttcga ggagatcatt ccagtgggac
     5641 gtaaatgggc caatattgtt gctaaaaaaa cggctaaaga cggtgcaacg tctaaaattt
     5701 atgcaaaatt cggtgtagaa atctatgctg ctgctaaaca aggtgaaccc gatccagaat
     5761 taaacacatc tttaaaattc gttattgaac gtgcaaagca ggcacaagtt ccaaagcacg
     5821 ttattgataa agcaattgat aaagccaaag gcggcggaga tgaaacgttc gtgcagggac
     5881 gttatgaagg ctttggtcct aatggctcaa tgattatcgc cgagacattg acttcaaatg
     5941 ttaaccgtac gattgctaac gttcgcacaa ttttcaataa aaaaggcggc aatatcggag
     6001 cggcaggttc tgtcagctat atgtttgaca atactggtgt gattgtattt aaaggatcag
     6061 accctgacca tatttttgaa attttacttg aagctgaagt tgatgttcgt gatgtgactg
     6121 aagaagaagg taacattgtt atttataccg aacctactga ccttcataaa ggaatcgcgg
     6181 ctctaaaagc agctggaatc actgagttct caacaacaga attagaaatg attgctcaat
     6241 ctgaagttga gctttcccca gaagatttag aaatctttga agggcttgtt gatgcccttg
     6301 aagatgacga cgatgtacaa aaagtttatc ataacgtcgc aaatctctaa ttatatatta
     6361 aagaaatctg tctttatggc agatttcttt aatctcatat aatccttata aaaaatataa
     6421 tgttcaactc gtcatattgc ttataaaaaa tcctcgttcc cagagaaata atatttatta
     6481 taattccagt tcttcttttt ctgattacag aaggcaaagt gacaattacg catagtttcc
     6541 cgataaagac gcgacagcta catcccgcat aaggcatttt tctctttatc cttgtacggt
     6601 acttcatgga acagagtttt tgaccttgcg aatcgtgatg tctgttgggg aggggcaatt
     6661 tgctcactga agcgtgagac tcgattaagc gcacgaaaca cagaaatcaa aaaacccggg
     6721 cactttttta caaggtaacc gggtaaaaat aatttttatt ttttaactgt tttgagactc
     6781 atagagatgt ctcaaaacta aaatttggct cctctgactg gacttgaacc agtgacatac
     6841 ggattaacag tccgccgttc taccgactga actacagagg aatcgtgaga acgaggcgaa
     6901 tattagcgat gcccacccac aatgtcaaag cctgttattt aaatttgaaa tcgtttgctg
     6961 aaataatctg cattttgtcg tttattccga cacaactggc tttttttcac acttttgcgg
     7021 ttcggatcga gggtatttcc acagccaacg tccagtaacc attcgccagt aaaacagcac
     7081 ggcccgcaca gcccagtcgg caaacattcc catccagaca ccaaccacac cccagccaag
     7141 catgatgccc agcacataac cgacgacaac ccggcaaccc cacatgctca acatagaaac
     7201 ccacatggcg taacgggcat cgcgagcacc tttaaatcca gcgggtagcc cccatgaggc
     7261 ggaccaaata ggcataaata aagcatttag ccaaatcaga atcacaacga catgtttaac
     7321 ctgtggatcc tgggtgtaaa acgatgccat aaccccggca aagggagccg ttagccaggc
     7381 gatggccgtt aatccaagag tggaaagcca gaacacatgc cgcaactgaa tctctgcttg
     7441 cgctatctgc cctaccccca accttcggcc tgtaatgatc gtagaagcag agccgagcgc
     7501 acttccgggt aagttgataa gagccgcaat tgaaaacgcg ataaaatttc cggcaataac
     7561 actggtcccc atcccggcaa cgaacatttg ggttaataac cgaccactgg taaataacac
     7621 tgattcgaca ctcgcgggaa taccaatccc catgacttcc cagataatgc taaaattcag
     7681 cggtttaaaa tagctcttta acgaaatcct tagcgcagga ttaaaaccaa tcgccagcac
     7741 ccacaaaatt gcaactgcgc caatataacg agaaatggtt aaacccagcc ctgccccgac
     7801 aaatcccagt cccggccagg agaaaaggcc gtaaatcaat atgccgctaa taataatatt
     7861 aagaatattc aggctaccgt taatcaatag cggtattttc gtattccctg caccacgaag
     7921 tgccccgcta ccaataagag tgatggcagc tgctggataa ctgagtaccg tcagctccag
     7981 ataagtcaac gccagtactt taacttctgt cgtggcatca cccgcgacga aatcaataat
     8041 ttgttcgcca aaatgatgaa taagcgttgc caacagtacg gcaaacaacg tcatgatcac
     8101 caatgactgc cgcgtcgcca ccctcgctcg tcgtcgatcc cgcttaccga gactaaatgc
     8161 cacaacgaca gtagtaccaa gatcgatagc agcaaaaaaa gccataatga ccatattgaa
     8221 gctgtccgcc aatcccacgc cggccatcgc atcttttccc agccagctga ccagaaaagt
     8281 gctcagaacc cccatcaaca ggacacaggc attctccatg aagataggaa cagcaagcgg
     8341 ggttatctcg cgccagaaca acactttgta gctcttgcgt ttagcgtgcc agcgagtgcc
     8401 gtgaacaacc tggcgtaaag cagaggagat attcaaagcc gaccttaatt gcagaaagtg
     8461 aaaccacatt tcaaataatg agggagaatc agcaaagctg caaagatttt cgccaacaaa
     8521 ttgtctgcaa atgcaacaaa ctgttgatag aaacggcaaa cagttgggga atttaaaaat
     8581 cgggtttgac aaaagatttt tcgccgttaa gatgtgcctc aacagcgatt cctctgtagt
     8641 tcagtcggta gaacggcgga ctgttaatcc gtatgtcact ggttcgagtc cagtcagagg
     8701 agccaaattc cgattcttac gctatcttat tagtccttat ttgatattga ttcaataagt
     8761 tagcgtgaaa atctttccag atgtgtattc agttttccct ccgcatccgg ttaatttggt
     8821 ggtcagattt gggggcaggt tggttcgatt ctggagtgac ccccaaatgt ctttaaacga
     8881 ttcaaaaatc cgtaacttaa aaccctcttc aaaacccgta aaactgtctg attcgcacgg
     8941 tctgtatctg ctggtcaatc agggcggttc gcgtatctgg tatctcaagt atcgcttcag
     9001 tggtaaagag tcccgcgtca gtctgggcgc atatcctctg gtttcacttg ctgaagcaag
     9061 acaacgacgt gacgatatcc gtaagctact gacgcagaat attaaccccg cccaccagcg
     9121 catgtctgat aaagccgcag cgtcaccgga aaagtatttt aaagccgtgg cgcttgcatg
     9181 gcacaaaacc aacaaaaaat ggtcgcctga ttatgccgcg cgcatcctcg ccagcatgga
     9241 aaatcatatc tttccggcga ttggtcatct gcctgtcact acgctgaaaa cgcagaattt
     9301 cactgcgtta ctgcgggtta ttgaggataa aggttttctg gaagtcgcgt cccgaacccg
     9361 gcagcaactc tgcaacatca tgcgttacgc cgtacagcag ggattcaccg aaaacaacct
     9421 ggcgcagcat ctggaaggcg tcaccgcgcc gccggttaag aatcactatc ccgccctgcc
     9481 gctggagcgg ttgcccgaat tgtttgagcg cattggcgac tatcagcagg gacggcagct
     9541 tacgaggctg gcggtggtgt tgactctcca cctgtttatc cgttccagcg agctgcgctt
     9601 tgcccgctgg ggtgagatag atttcagaaa caaaatctgg accatccccg ccacaaggga
     9661 agcgattgag aaagtccgtt tctctggccg tggcgcaaaa atgcgtactc catatatagt
     9721 gccgctttct cgtcaggcta tcgccattct gaagcagata aaggaaatct ccggccatct
     9781 ggaactggtg ttccccggcg accataaccc gtataagccg atgagcgaaa acactgtcaa
     9841 ccgggcgttg cgtcttatgg gctatgatac caaaactgat gtctgtgggc atggattccg
     9901 gacaatggcg tgtagcgcat tagtggaaac tgaactctgg tcacgggata ccgtggagcg
     9961 gcagatgagt catcaggagc gcaacagcgt tcgggcagcg tatatccacc gggctgaaca
    10021 tctcgacgcc cgtacagcca tgatgcagtg gtggtcggat tatctggatg taagtcgcga
    10081 ggggtacgtt gcgccgtata tttatgcgcg gcggcataag gcggcctgag acagtggcta
    10141 tataatttgt taaaaatgaa aaagcagatc ctgattgaat ccggatctgc tttttacatt
    10201 aggcaatcgc tgccagacaa tctgcaccag aaacgccata actgcaccag ttcagtacca
    10261 ccgcttacct gcgccagtct gccgtcgcct gtctgtgtca ggactgcgcc agatcttatc
    10321 gaataaacat caaactgcgc cagtgttacg gccctttcag ccctttggcc ttttccggtc
    10381 tggcgctgtt acccttagcc gccccttacc ctttccggcc tttttccttt gctggcgcaa
    10441 tcgccagaaa aatcgtcaag ctgcaccaga agcctgccaa taggtcatac cgttcagaag
    10501 catcgttatt gagaggaaac cgtacaaaaa atttctacgt agaaattttt tcggtggata
    10561 acgatgaata aagagtattt tataatgtga tggctatcaa aaatcgacca tccaaaaata
    10621 attcattgtt cattgattta taatgaataa ccatgaattt aatagtcgat gattattgtt
    10681 tttatcagta ttgataggaa agtatacaaa aaattttggc cccaaaattt tttgtacgaa
    10741 aaccgatgaa taacgcgaaa ttaataggaa accatccaaa attatttggg gcaaataatt
    10801 ttgcccgaaa accgatggat aactcgatct tttcaaagca acggctatca atcagtatcc
    10861 tttcttccgt aaacctgcgc cacataccgc ccgcgcccgt cgccgtgtcc caaatccatc
    10921 gccgtcattg ccagcgcttc tttctcactg aatccctgcg ccagataatg acgaatggca
    10981 tcctgcgccc acgcatagcg caacgagtgc ggggaatatg tgccagttaa cccgagacgt
    11041 gacgcctggc tgtgccagta tttcatcgcg cttttcaggt cgggtttatc tatcagcctg
    11101 ccgtggcgat cttctgccac aaccaacgca ttatccagcg cttttctgat agcgacagca
    11161 tccagaataa cggtttctcg cggacgcccg cctttggtgc cgaacaccac ggttaaacgg
    11221 ggctcacccc gctccagcga ttgcttccac gttcttaatg actgcgcact ttgcaccacc
    11281 tcctgcgaac gtaatcccat cagccttgag agttccagcg ccgctgccat
//
LOCUS       DAJVUK010000139        11238 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.139, whole genome shotgun sequence.
ACCESSION   DAJVUK010000139 DAJVUK010000000
VERSION     DAJVUK010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11238
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.139"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            63..662
                     /locus_tag="OQQ57_003343"
     CDS             63..662
                     /locus_tag="OQQ57_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1957989.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPG
                     LKRALKRLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMGR
                     FFFHVMGALAEMERELIVERTLAGLAAARARGRTGGRRPKLTKEQHEQIARLIKNGHD
                     RKQLAIIYGIGTSTIYRYHPVGDIQTEETTGQTQENENR"
     gene            complement(691..1179)
                     /locus_tag="OQQ57_003344"
     CDS             complement(691..1179)
                     /locus_tag="OQQ57_003344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001761054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957990.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LF"
     gene            complement(1192..3999)
                     /locus_tag="OQQ57_003345"
     CDS             complement(1192..3999)
                     /locus_tag="OQQ57_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1957991.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRID
                     QNSPQFKALREQALKLGSETQFTAGDAASGQAFLAMAGFTPQAIQAALPGVLSMATAG
                     GMDLGETADIGSNILTQFGLSADQMDRVGDTLTAAFTRTNTDLRALGETMKYAGPVAG
                     KLGISLEQAAAMAGVLANMGIRGSDAGTAMRASLARLASPPKAAAEALKELGVSVSDA
                     GGKMRPMEDVLADLYKATRKYGEVDRVSFFKDIAGEEAFTSFMALVDAAGDGSLPKLR
                     KELEGARGEAERTAKVMANNLDGDLKSLSSAWEGLRIRIADLIDGPLRSVTQWLTRVV
                     SKVTALAQAHPALTRQLLIAGGALLAMTATVGSLSLAIGVLAGPLAKLRLGFSLLTGS
                     MNAVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDNPKDNKPLTDSNTGTLRRLSKIADNTGKLVE
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     VAASSRPVAEAIRSPVASVPVTSRNREPVAFGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAGRGCFYDKD"
     gene            complement(4037..4141)
                     /locus_tag="OQQ57_003346"
     CDS             complement(4037..4141)
                     /locus_tag="OQQ57_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCS1957992.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVS"
     gene            complement(4150..4524)
                     /locus_tag="OQQ57_003347"
     CDS             complement(4150..4524)
                     /locus_tag="OQQ57_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1957993.1"
                     /translation="MKDIDTETRNNTVADNVTAVEDMAVERGVKLTRPIERGGEKITY
                     VEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            complement(4580..5090)
                     /locus_tag="OQQ57_003348"
                     /pseudo
     CDS             complement(4580..5090)
                     /locus_tag="OQQ57_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            complement(5090..6274)
                     /locus_tag="OQQ57_003349"
     CDS             complement(5090..6274)
                     /locus_tag="OQQ57_003349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HCS1957994.1"
                     /translation="MSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIADKLRAFVY
                     ASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKNGKNETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLG
                     GA"
     gene            6432..7541
                     /locus_tag="OQQ57_003350"
                     /pseudo
     CDS             6432..7541
                     /locus_tag="OQQ57_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
     gene            7790..10909
                     /locus_tag="OQQ57_003351"
     CDS             7790..10909
                     /locus_tag="OQQ57_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1957995.1"
                     /translation="MIGQFLSATEILAKNYVRNKMVKNPFYSNLKWNFIEKNIIRLTS
                     SPVKSVLCISAFSFVLLYVGYLNELFIKNNLLHYFPFRHSLTEWQTTILSGQLTIIGI
                     VYPLVIGLVSVLFQKKADRKIAQTAYQRYSGFMLAGLSGLFLSGFILLSVLIKTVFGS
                     YLYGIACLISILWLLINIVLSIWFFIVSLEILDDVKRQIIIKRYIAFEIVMPHICNKI
                     SAKLRLYPIYQKHNYSNLEITQADYKGEYISVASSYSKEDELSLYHRPFQLTLNLINY
                     QLKKKNHFASFVIGDNRTKETESTGKILFSVKNIKPDSLLIKILKQCFYRAPIKGGDF
                     SVSLTMQAITADTYMYLRDSDLISFDNAISALINNFNNLCDLYFFQDDNTNNNFLLIT
                     TELFERSFQYEFSDEVYKISNNSMDKINLSERFFELCLWSGVRIINNRKHLISNELCI
                     YMGITRSQWSILTEWFRNNQSLLNASLRSRYNRILRTYITVWEQYQESINFRFCNTEN
                     SDLFELFCKTQLQELPSMIIDATQTRDPSTIDTAVDLINRWQHSMNIDSHSVEKYSYK
                     GQLFNPGFFISKKLNFNSDREWFNIAIINALTDMRICTCLYLTSRINTSDKLMTHYIK
                     LILEGKLIDQTGGYETPTEEIDNASQLIKILIRICLWTWSENMEHNGWMNSLARRLRD
                     YDKTDMVMGRVYSNVFDCGFIDMEQSWVQLLLIFSKKNDSVSKEIKEAIENNYITYRE
                     KQRLIGVLSKICNSIEYTKIKLTLTLDDLQTKKENLRKLLQEHINMLKKDLDMRLQDA
                     AIDVHRLDSTARKTSEHLRKRIKKTLPLSLFKSIDFKQASDCFTKHKISIKIDKEPYA
                     EGIESIPYINEGDIQADLILKDIQRIILSNLFSTGCSQHTVIEDFNMLIDHIKSSADL
                     AGKLVLVMSKEIFQQYNRMLFDNPNLRELMRKNDDGSMNITTESGTRKVYFLPFVNQP
                     FSLVVKDNYFTKLIIREYDNNKLVNVTSENIKSDSDKFKLTLNYELNIVFEGNADLKI
                     AHSQRVTSE"
     gene            11045..>11238
                     /locus_tag="OQQ57_003352"
     CDS             11045..>11238
                     /locus_tag="OQQ57_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HCS1957996.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASPIHSSEGIP"
BASE COUNT         3076 a         2818 c         2516 g         2828 t
ORIGIN      
        1 ttaaataatg gccgtttctg gcctgcatgg catgatttgc gcttttggac gggagattca
       61 gtgtgctgat tggctatgta agggtatcaa caaatgacca gaatacagac ctgcaacgaa
      121 acgctcttgt ttgtgcagga tgtgaacaaa tatttgaaga taaattaagc gggacaaaga
      181 cagaccgacc gggattaaaa cgcgctttaa agcgccttca aaaaggtgac acgctggttg
      241 tctggaaact ggatcgcctc gggcgaagca tgaaacatct gatttctctc gtcggggaac
      301 tacgggagcg agggattaat tttcgcagtc tgaccgacag catagacaca tcttctccaa
      361 tggggcgttt tttcttccac gtgatgggtg ccctggctga aatggaacgt gaattaattg
      421 ttgaacgtac actggccggg ctggcggcag cgcgcgcaag ggggcgcaca ggcggacgtc
      481 gaccgaagct gacaaaagaa cagcatgagc aaatagcaag gctaatcaaa aacgggcacg
      541 acagaaaaca actggcaata atttacggca ttggcacatc gacgatttat cgttatcacc
      601 ctgtaggcga tatacagact gaagaaacaa ccgggcagac tcaggaaaat gaaaaccgct
      661 aatctgacca ttagcggttt ttgtgttaaa tcagaacagc cctttaactg aactggccgc
      721 gctgttaaga gatgatgtca ccttatcttt gaagccggac agcatatcac tgaacgatga
      781 ggattgcagg cgctcccgca aatcctcatc acagcgttca agagtcagtg aaaattctat
      841 ctttttcgcc ttaccgtagc gatcaaactc ggagcgggtc gtattcgttt cagtcaggac
      901 atacatgccg taaatctgcc cgacgccatc aatcaaaggc cagggtcgtc ctgtatacgc
      961 ctgcgtagtc agcagcgaca gcgacacttc gccacctgta atttcaggat aaagcacacc
     1021 agaaagaacg atgcgatcat cacctgcacc gatatactgc cagcttgctg aacggttaac
     1081 gcgttcattt ttcacatgcc gccagctttt gttttgctgt aactgctgat gcggcagcgt
     1141 gcgcagctca aaaacaaaca tgccgtagat catcatcatg gccatgactc ctcaatcttt
     1201 atcgtaaaaa cagccacgcc cggcacgggc gcgccgttcc atttctgccc tgaccatttc
     1261 accgaccagt ttcgccagtt cgcggggatt ctgcgtaaca acgttatgca gatgaacatg
     1321 aatttcacca ccaaatccga aggcaacagg ctcccggtta cgggaagtta caggaactga
     1381 tgccactgga gatcgtatag cctccgccac cgggcgggag ctggccgcaa caacagggac
     1441 cagcgccgga ggcagcggag ccggaaccac gggtgtgata ttaattgcgg gggcaggctt
     1501 actgacctgc gcaatcttcc gctcctgcca ctccccacga acagcaagtg ctcggggcag
     1561 gtttttaaag acaatatcgc cggggccaat gcgttttttc gtctcctcaa ccagcttacc
     1621 tgtgttatca gcaattttgc tgagtctgcg cagcgtaccg gtattgctgt ctgtgagcgg
     1681 tttattgtct ttggggttat cacctccggt gccattgcca ttttccacag gcttcggcgg
     1741 attgattttc gccagatccc cctgaagcaa ggcaaccttg tcctgaagaa tggccgcacg
     1801 ctgtgcgtct tcgattttct tgcgcgccct ttccgcttca tccggaagca caccaagctt
     1861 ttcaagtatc cacgccagcg tatccagcaa catttttgca ggtgtcagaa caagttgtaa
     1921 cgcaccgcca agaacgttac cgaatatctc gccagcactg gtacatttat ccagagtttc
     1981 cttgctggac tccatcggtg acagcagcga tttaaaccag ttaaacacct ggctgatccc
     2041 actcccgatt gcgtcaaaaa caggaccaaa ccgttcaaag gtttcgcgca acggggtcag
     2101 cctttccata atcccgctga acaccccggc aaaaaatgcc ctgatgggat cccagtattt
     2161 ccagataaga acggcagctc cggcaagcgc agccacgata agaccaaccg gactgaacaa
     2221 cgccccgata gcgcctccca gtaaagaaac ggaacccgtc accattcccc atagtgctgg
     2281 cagaaccctg acagcattca ttgatccggt caggagggaa aaaccaagac gcagttttgc
     2341 cagcgggcca gcaagcacac caatagccag cgacaacgag ccaaccgttg cagtcattgc
     2401 cagcaatgca ccgcctgcaa tcagtagctg gcgcgtcagt gcgggatggg cctgcgccag
     2461 cgccgtcacc tttgatacca cacgcgtgag ccactgcgtg acagaacgca gcggaccgtc
     2521 aatcagatct gcaatgcgga tgcgcaaccc ttcccatgca ctgctgagtg atttcagatc
     2581 gccgtcaagg ttgttggcca taacctttgc cgtgcgttca gcctcaccgc gcgcgccttc
     2641 aagttctttt ctcagtttgg gtaaggagcc gtcacctgcc gcatcaacga gggccataaa
     2701 tgatgtgaaa gcctcttctc cggcaatgtc cttaaagaac gatacccggt caacttcccc
     2761 gtatttgcgg gtagctttat aaaggtcagc cagcacatcc tccatcgggc gcattttgcc
     2821 cccggcatcc gagacagaca cgccaagctc tttcagcgcc tctgctgccg cctttggcgg
     2881 tgatgccaga cgagccaggc tggcacgcat tgccgtacca gcatcactcc ccctgatacc
     2941 catattcgcc agcacgcccg ccatcgctgc ggcctgctcc agagatattc ccagcttacc
     3001 cgccaccgga cctgcatatt tcatggtttc acccagtgcg cgaaggtcag tgttggtacg
     3061 ggtaaacgct gcggtgagtg tgtcgccgac ccggtccatc tggtcagcag aaagaccgaa
     3121 ctgcgtcaga atatttgagc caatatccgc cgtctcaccg aggtccatac cgccagccgt
     3181 tgccatgctc agtacgccag ggagcgcagc ctgaatggcc tgtggtgtaa agccagccat
     3241 tgcaagaaat gcctgtccac tggcggcatc gcctgcggtg aactgcgttt cagagccaag
     3301 ttttaacgcc tgctcacgca gcgccttaaa ctgcgggctg ttctggtcga ttcgcgtcag
     3361 tgcctgaacg cgggacatct ctttgccgaa cccgatcgca ggctgcaaaa aacgcccggc
     3421 agcatagccg cccgccgctg ccgcaccaat tgccagcgca ccacctgttt tcagttttcc
     3481 cgctgtttcc tgcgcgcgcg aataccgctc acgcgcccgt gttacacgcg caagcgcctg
     3541 ccgttcgcgt tcaagctggt tgttgtactg ttcggtgcgt ctgatggcct gctggatggt
     3601 gttatcgctg cctgtcaggg aaatgccgtg gcgtttcagc tctccgccaa gctcccgcat
     3661 tttctgaatt tcccgtgtgc gcgattcatt caggcgttca agccgggtgc ttaactgctg
     3721 catcagcttt tgttgttttt cgctgagcac tgtacccgtg cgttgtaact gattaagggc
     3781 gttaagctgg cgtcgtgctt tcacgatgcc agcatccgct ttactgacag cgtcacgggc
     3841 gcgctcaaat gatcgcgcct gacgctcgag atttttgatc gccccctgcg ttcgctggat
     3901 ggagtcacca aactgcccca tcaggcggcg ggcgttttcg gcaggccggg tcagcctgtc
     3961 aacggcgctg aaagcgaccc ggatatcaag agtcttcatt gtctgcattc ccgctacgaa
     4021 gtgccgcccg ctcacgtcag ctaaccactt cgccgggcgt catcatgaag atttcggcgg
     4081 gcgaccagtt aaaaatggcg gcaatatccg ccaccagatc ttcgatgtgc tcaaagcaca
     4141 ccagggtgat tacgctgccg tctcctgcac gctcttcgcg ccagagtctg gctcgctcat
     4201 aaaatttaca gccacagcgc acaactgaat aaaatcgcgt gacgacattt ttttaatcat
     4261 cacttcatcc agtcgtggcg aggtcacgcg aggcaacagc gtgaacatgg tatccgcttt
     4321 cagattcagc acatcagaca gcgacagacc acgcagggat ccagcctgct caatagcccc
     4381 ggtgatctcc acatacgtga ttttttcgcc accacgctca attggtcggg tcagttttac
     4441 gccacgttcg acagccatat cctcaactgc cgtcacatta tccgccacgg tgttattccg
     4501 ggtttcagta tcgatgtctt tcatctgttg tctccttttc agtcagaggc gacgcactgc
     4561 gccgccagca tattacttat cagccaagcc caagcgcgga acggatgcga tcgggcacaa
     4621 tgtccttgcc gtccttccgg taaatgaagt tcagcaggtc aatctcccac aacgggcgat
     4681 cgttaacact cagcttgtag taggtgtttt aatggcgtaa gtgtgtgatg tggcttcgcc
     4741 ctgtttggct tcccccatat caatttccgt cacacgtccg cgcatttcga cttcatacag
     4801 gtcgctttct gcatcggtgt agtattcacc cgcaaaacgc agcagcgtgc cgtcaatcgt
     4861 gccgccatac ttaaggaaca gctcacgaac tgcgccccca tgacaaagct cgcatcaagc
     4921 gcggagtcgt ccagaccgag atcaatactt accgcaccca tcatgccacc accccggtag
     4981 ctgtcggttt tgcgcgtcag cttaggcaga gtgacggacg tcacattacc cacttcgttt
     5041 tcaccatcca caaacagcgt aaaaaagcga agatgttttg gcacagccat caggcacctc
     5101 ccagcaccgc aaatgcgggt tcaaagtatt catcagtaaa cgtctggtaa agctccatgt
     5161 cttccagtgg cggaacgggc gtatatttgt agcgaatacg cacacgtccc tgacgtaaat
     5221 ccgtggtgct gttatccacc acgtcatacc agcactccgc gccaatcagt ttcccggcag
     5281 tcaccagtga atccagtttt gccctgatgg cactgataac atccttcaca ttcgcaggcg
     5341 tcagtggact gtcgatggtt tcaaactgcg cttccgcaat tgaatcagcc agcacctgtg
     5401 cggttcgggt atacacctca aagatgtagg cgttcgtttc cggtgtgcgg ttaccccaga
     5461 agcggaaccc gttgcgacga ataatggtcg tgatttcttt gttgttgagg ctgttggcat
     5521 cgctgtcttc ggcctgcaac gaccagaaca catgcctcga catccccagc acatttttaa
     5581 ccggaacgtt ggacagcgat ttgtgccatc cctgttcatg gtcaatgtac gcacgaaggc
     5641 cgcacgcata ggcaggcgcg gggaacgttt cgtttttgcc atttttcggg ttgtaggcga
     5701 tgaagtccgg ccataagagc atcacctcac gttcgttgaa tttctggcgg taggtaattg
     5761 cctcggccat cgtgttacag ccatgacatg aggcatacac aaacgcgcgc agtttatctg
     5821 caatcacgca cagggatttt gttaccgcct ccgtgtccag ctccggcgcg gccagaatac
     5881 gcggacggta tccgatgctt tcatcctgct ctgcaacaag cagcgcatac atccccgtat
     5941 agctgccgtc atcctcagaa ccaccgataa ccagttgatc ctgcgtcttt ccgtcttctt
     6001 ctttgtgttc agccacgcga acgacgatca cctttgtgct cacctggtct gcgatggcct
     6061 taagcgcacg ataaagcgtc cccgttgtcc cgcattttcc cagcacgtca ttgacgcggg
     6121 tcagcagtgt gggcttgttc agcgggaaca gcttcgcgtc cgcatcatcc gccgttgcca
     6181 cgataccgat aacgctggaa tcaacatcgt taatcgctgt taccaggtcg gtattctccg
     6241 taacacgggc accatgaaaa cgagtttcac tcatagcttc agccccttgt atccgttaaa
     6301 tgattcagca acaatcatca cccaccacgc gcgtaatctc acccctgcgc cgttctcccg
     6361 ccacggcgac aacaaaaagc agtaaccccc tccgcacgca catgcgacca tgccgcacag
     6421 ggagggagca gatgaccgac accaccatgc aattgctcag tcagggcacg gcccccgtga
     6481 aaatgccgga ttttgatatt ctctcggagg gtaaaacgct gtcaggcgtg gcggagcgcc
     6541 tgatgagcct gtaactgacc gacaaccggg gatttgaggc ggaccagctc accatcacgc
     6601 tggatgatgc ggatggtcag ttgcagctac cgccacgggg cgcgcgtctg acggttctca
     6661 ttggctggaa aggggaaccg ctgacagaaa aaggcactta cattgttgat gaaatcgctc
     6721 acgaaggacc gccggacagg ctgactgttt cagccagaag cgcagatttt cgggatgaat
     6781 ttaacgttaa acgtgaggtg tcctggcatg atgtgaccgt tgagcgtgtg gtatccgcca
     6841 tcactcatcg gtacggtctg aaaccgcaaa tcagcgaaat gctgatggat atcgaaatcg
     6901 accacgccga ccagaccgaa gaaagcgaca tgtcctttct tacgcgcatg gcggaaatgc
     6961 tgggagcaat cgccacggta aaaagcggca atctgttatt catcatgcca ggtggtggcg
     7021 tgaacgcaca ggggcagccg ttgccctcgt tcgccattac acgcagcagc ggcgatcgcc
     7081 atcagttccg cattgctgac cgcgaggcgt atacgggggt acgcgcctac tggcttgatc
     7141 ttaattacgg gaaaaagaaa aaagtcagcg tgaaacgccg caaaccgcca aaacccaaaa
     7201 aggagaaaag cagcagtcgg gaaggcgact atatggaagg tgcggaaggc aacgtgtttg
     7261 tgttacgcaa gacttatcag aacgagcagg cagcaagacg cgcagcggcg gcaaagtggc
     7321 agcagctaca acgcggagcc gcatcattct ccatcacgct ggcgcgtggt cgtgcagaac
     7381 tctatcccga aatgcatggc acagtgacag gctttaaaag cgagattgat tatcaggact
     7441 ggactattgc aaaagccgag cacaccattg ataacagcgg ctttaccacg cagcttgaac
     7501 ttgaagcaaa aatcccggaa tggatagcag aaacagaata aatctcttaa aaatattatt
     7561 tttgagatgt gcttctacac tgacagtaag aacaaaagat aatgtatcag cccactagat
     7621 gtcagaggtt ggggcatcaa ccagatgcta acaataatac ggatgttttt cccacatgac
     7681 agaggaagtc aagtataatc ttcacagtcc atcccgtcca agggaatatg actcaatagt
     7741 aaaagttcca gtttagttag tagacccaca ctttatagaa gagtaattca tgattggaca
     7801 atttttaagt gcaacagaga ttttagcaaa gaactatgtt cgtaataaaa tggttaaaaa
     7861 tccattttat tcgaatttaa aatggaattt tattgaaaaa aacatcataa gattaacatc
     7921 ctcaccggtt aaatcagtac tttgcatatc agctttttca tttgtactac tttatgttgg
     7981 atatttaaac gaattattta taaaaaataa tcttttacat tatttcccgt ttaggcattc
     8041 attaaccgaa tggcaaacaa ccattttaag tggccaattg acaattattg gtattgtata
     8101 cccccttgtt ataggtttag taagtgtctt attccaaaaa aaggcagata gaaaaatagc
     8161 ccaaactgct tatcagcgtt actcaggatt catgcttgct ggactcagcg ggcttttctt
     8221 atcaggattt atacttctca gtgtactaat taaaactgtc tttggaagtt atctttatgg
     8281 tatagcttgt ctaatcagca tattatggct tttgataaac atagttcttt ctatttggtt
     8341 ctttatcgtg agtcttgaaa ttcttgatga tgtaaaacgg caaataatta taaagcgata
     8401 cattgccttc gaaatagtaa tgccccatat ttgtaacaaa atctcagcca agcttaggtt
     8461 ataccctatc tatcaaaaac ataactattc aaatttagaa atcacgcaag ccgattacaa
     8521 aggagaatac atatctgtgg ctagcagtta ttctaaggaa gatgagttaa gtttatatca
     8581 ccgtcctttt caacttactc ttaatcttat taattaccaa ctaaaaaaga agaatcattt
     8641 tgcgtcattt gtcattggtg ataatcgtac aaaagaaaca gaatccacgg gtaagatact
     8701 ttttagcgtt aaaaatatca aaccagacag cttattaata aaaatactta agcaatgttt
     8761 ttatagggct ccgattaaag gaggagattt ttccgtaagt cttacaatgc aggctataac
     8821 agcagatacg tatatgtatc tgcgggattc tgatctcatt agttttgaca atgctatctc
     8881 tgcattaatt aataacttta ataatctctg cgatttgtat ttttttcaag atgataatac
     8941 caacaataac ttcttactga tcactacaga attatttgaa cggagttttc aatatgagtt
     9001 ttcagatgaa gtttataaaa tatcaaataa ttccatggat aaaattaatc tttctgaaag
     9061 attttttgaa ttatgtcttt ggagcggagt gcgtattatc aataatagaa aacatcttat
     9121 cagcaatgaa ctttgtatct atatgggaat tactcgttca caatggtcaa tattaacaga
     9181 atggttccga aacaaccaat cactcttaaa tgcctcgctt cgttcacgtt ataatcgtat
     9241 attaagaacc tatatcactg tttgggagca atatcaagaa agcataaact ttcgtttctg
     9301 caatacagag aattcagatt tatttgaatt attttgcaaa acgcaactac aagaacttcc
     9361 atcgatgatt attgatgcaa cacagactcg cgatccttct actattgata cagccgtcga
     9421 tcttattaac cgatggcagc actcaatgaa tattgacagc cattcggtag aaaaatacag
     9481 ttacaaaggc cagcttttta acccgggttt tttcatatcc aaaaaactaa acttcaattc
     9541 agacagagag tggttcaata ttgccatcat aaatgcgttg actgacatgc gtatatgcac
     9601 atgtctttat ctgacatcaa gaatcaatac ttctgacaaa ctaatgacac attacattaa
     9661 acttatttta gagggtaaac ttattgacca aaccggtgga tatgaaactc ccactgaaga
     9721 aattgataat gcaagccaac taatcaagat attaattaga atctgcctgt ggacatggtc
     9781 tgaaaatatg gagcacaatg ggtggatgaa tagtttagca aggcgtttac gtgactatga
     9841 taaaacagac atggtgatgg gcagagttta cagtaatgtt tttgactgtg gatttattga
     9901 tatggaacaa tcatgggttc agctattatt aattttttct aaaaagaacg atagcgtatc
     9961 aaaagaaata aaagaagcaa tagaaaacaa ctatataaca tatcgtgaga agcaacgact
    10021 cattggagta ttatcaaaaa tttgtaactc catcgaatac actaaaatca agctgacttt
    10081 aacattggac gatctccaaa caaaaaaaga aaacttaaga aagttgcttc aagagcatat
    10141 taacatgcta aagaaagatc ttgatatgag acttcaggat gctgccatag atgtacatcg
    10201 actagatagc actgcacgta aaacatcaga acatcttcgt aaacgcatca agaaaacgct
    10261 ccctctttca cttttcaaat ctattgattt taagcaggct agcgattgtt tcacaaaaca
    10321 taagatatct attaagatag ataaagaacc gtatgccgaa ggaatagaat ccatccctta
    10381 tatcaatgaa ggtgatattc aagcagactt aattctcaag gacatccaga gaataatact
    10441 ttcaaattta tttagcactg gctgttcgca acataccgta atagaagatt tcaatatgtt
    10501 gattgatcac ataaaatcat ctgctgactt ggctggcaaa ctggttcttg tgatgagtaa
    10561 agagatcttt cagcaatata atcgtatgct tttcgataat cccaacctca gagaactaat
    10621 gagaaaaaat gatgatggct ctatgaacat aactactgaa tccggtaccc gtaaggttta
    10681 cttcttacca tttgttaatc aaccattttc tcttgtggta aaggataact acttcactaa
    10741 attaattatt agagaatatg ataataataa gttagtaaat gtcacttcag agaatatcaa
    10801 aagtgactca gataaattca agctaactct taactatgag ttgaatatag tatttgaagg
    10861 aaacgctgat ttaaaaatag ctcactcgca aagagtgaca tcagaataat atctttgacg
    10921 gcgctcctta gagtgccgtt cgtttattaa ctaatgctaa aaatcattat atagagaaag
    10981 tcatgtttaa atcttagaga atacaaccta gaatagtgta agcactacaa taagagaggt
    11041 cgctatgttc cgttgtccgc tttgtggcgc atctgcccgt atccgcacca gtcgtccgga
    11101 aaatgattca aacaccgtga gacaaaagta ttatcagtgt aacaatctag aatgcggcgt
    11161 atgtttctca acactggaag ccttccacaa attcacttca aagcacgcct cccccattca
    11221 ctcatcagag ggcatccc
//
LOCUS       DAJVUK010000140        11069 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.140, whole genome shotgun sequence.
ACCESSION   DAJVUK010000140 DAJVUK010000000
VERSION     DAJVUK010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11069
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.140"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..205
                     /locus_tag="OQQ57_003353"
     CDS             <1..205
                     /locus_tag="OQQ57_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957997.1"
                     /translation="GGQFLLTTSLPKEKHLTGKIFTQRIERNNLTLRTRIKRLARKTL
                     CFSRSIELHEKVIGAFMEKCMFY"
     gene            443..928
                     /locus_tag="OQQ57_003354"
     CDS             443..928
                     /locus_tag="OQQ57_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HCS1957998.1"
                     /translation="MKNKSGNSYYREAVDIHSSLELSFILHKYHLRVDEKKSRNVFSA
                     IRDELILDGDSRQNLATFCQTWIDDEIRELLNLSIDRNMIYKDEYPQMAEPEGRCVRM
                     LSDSWSFPDSRHTLGCSTIGSSEAAMLGRLALKWQWCKKREVQGKSTEPDLRSCANML
                     A"
     gene            909..1145
                     /locus_tag="OQQ57_003355"
     CDS             909..1145
                     /locus_tag="OQQ57_003355"
                     /inference="COORDINATES: protein motif:HMM:NF012503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1957999.1"
                     /translation="MQICWHKFCRYCDVKLRKISLYDHRLIMNAEEVLKHVDENTIGV
                     VTTLGITCFYFCKADCVSVFKISVKLILVFIFIS"
     gene            1185..2645
                     /locus_tag="OQQ57_003356"
     CDS             1185..2645
                     /locus_tag="OQQ57_003356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708296.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1958000.1"
                     /translation="MSNANIAPKSKKMTVGTLAIMNITAVVSLRFIPSEAEYGLGAIF
                     YYTFAAIMFLVPVAFVAAELATTYPQKGGAFRWIGEAFGARWGFVGMLMTWLQVIPYF
                     PTVLTFGAVSVAFIDVDMGVAESIASNKWYILFFVLFVYWGAICVALRGVGIFSQVSK
                     WCGIIGTIIPAIILVILGFSYLWFSGKPAVIPLGWGDLFPNIANFQNIVLAASIFLAY
                     AGMEMNAVHVNDLDNPTKKYPIAITIASIGTIAIFLLSTLGVAFIIPTDKISLTQSLL
                     VAYDMLFEWAGVPWLGSVMAFMLAIGVLGGVVTWIAGPNTGVLAIAKAGYLPKFFQKT
                     NRHGMGHHLMFVQGIIVSVLSVTFVIMPSVQAAFQILSQLTVMLYLVMYMLMFAGAIY
                     LRHSQPDKKRPYRAPALFFWATLGFLGSFLAFVLSFIPPEQIPTGSPTSYVLYLLVLV
                     ALFLLIPILIYAFRKSDWKDPNSDFEPFSWEKRTSN"
     gene            2679..3488
                     /gene="murI"
                     /locus_tag="OQQ57_003357"
     CDS             2679..3488
                     /gene="murI"
                     /locus_tag="OQQ57_003357"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001507729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HCS1958001.1"
                     /translation="MFSAESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPY
                     GNRSADDIISLTKKMLTFLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSII
                     EPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGN
                     LNAPAILNDIKKHVNHLISLHPVNEIILGCTHYPIVQSLFEAVAPDIKFINPAHDQAI
                     SIKNHLGQLNLLNSSNIGTLQINTSGSMEIYKTVLGELSITKPHTFSIRQF"
     gene            complement(3607..4319)
                     /locus_tag="OQQ57_003358"
     CDS             complement(join(3607..4055,4055..4319))
                     /locus_tag="OQQ57_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1958002.1"
                     /translation="MARVNIHCPRCQSAQVYRHGQNPKGRDRLRCRDRLRCRDCHRVF
                     QLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGSNTVIRTFKKLAPKRITSSPV
                     THADVAFICELDEQWSYVGSKARQHWIWYAYNTKTGGVLAYTFGPRTDQTCRELLALL
                     TPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQCIERNNLTLRTRIKRLGRKTICFSR
                     SVEIHEKVIGAFIEKHMFY"
     gene            4845..5834
                     /gene="umuC"
                     /locus_tag="OQQ57_003359"
                     /pseudo
     CDS             4845..5834
                     /gene="umuC"
                     /locus_tag="OQQ57_003359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001744069.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V subunit
                     UmuC"
     gene            6030..6656
                     /locus_tag="OQQ57_003360"
     CDS             6030..6656
                     /locus_tag="OQQ57_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010260829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family plasmid-partitioning AAA ATPase"
                     /protein_id="HCS1958003.1"
                     /translation="MIIVLGSQKGGVGKSTLAVSIAAYLMSLGNRVIIVDADDQKSVL
                     TWYNNRPEDLPHIPVTGATGNIKAMLKEHEKSYDFVIADCAGRDSAEMRSGLMAADVF
                     ISPLRPSQMDLDVVPHTCSVFTAAKDFNEDVRGYLVLNMTPTNMFVNEANEAAEVLKD
                     YPEMHLANSRVCDRKAHRDAWAESMTIFETQNDKAQQEIEALVKEVIL"
     gene            6653..6955
                     /locus_tag="OQQ57_003361"
     CDS             6653..6955
                     /locus_tag="OQQ57_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001245884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958004.1"
                     /translation="MRNRANTSPRDEAAFINGGTAGLDNTKKSSDKSSVVSKAKPVSI
                     SFFEENLKDIDALITAEMVSGKGRVNRSDVVRAAVEALKTLSKTEVSRLIAEVKQR"
     gene            complement(7406..8983)
                     /locus_tag="OQQ57_003362"
     CDS             complement(7406..8983)
                     /locus_tag="OQQ57_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HCS1958005.1"
                     /translation="MRQNLPVTGRNLELPKDANILSTTSPQSHITYVNPDFIKISGFT
                     EEELLGQPHNIVRHPDMPPAAFEHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAYVTPI
                     AKNGSIVEYQSVRTKPEPEQVLAAEKLYAQLRSGKAARPKLAASFSVKILLLIWGSII
                     SSAMAAGMLTDTSISSLLLATLMSGSLSSVSVLAILSPLGRLVERARNISNNPLSQSL
                     YTGRTDEFGQIEFALRMMQAETGAIVGRIGDASNRLSEHTRGLLKDIESSNVLTVEQQ
                     AETDQIATAVNQMVASIQEVASNAQHAADAAGRADTETASGQRLVAHTSQSITALEGE
                     IRQATQVIHELEGQSNEISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD
                     EVRSLAARTQQSTTDIQSMISALQERAQSAVTVMEQSSRQAHTSVAHAEEAATALDGI
                     GQRVNEITDMNAQIATAVEQQGAVSEDINRSIINIRDAADTNVQTGQNNLQSAKSVAQ
                     LTSALSELAKQFWEKRG"
     gene            9293..9853
                     /locus_tag="OQQ57_003363"
     CDS             9293..9853
                     /locus_tag="OQQ57_003363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1958006.1"
                     /translation="MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQ
                     LEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSP
                     MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATA
                     GEPKAQLAREFNISRETLYQYLRTDD"
     gene            9857..>11069
                     /locus_tag="OQQ57_003364"
     CDS             9857..>11069
                     /locus_tag="OQQ57_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs1 family transposase"
                     /protein_id="HCS1958007.1"
                     /translation="MPRRLILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRG
                     DANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVAKQVQAEPASWAKYGERDVTRRE
                     HAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS
                     VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKP
                     NSRHMLEHIERLKTFQLVDLPEGLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYA
                     TLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQGKAINDKVRLYSRIG
                     QALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRY
                     TPALLEVLELRA"
BASE COUNT         2943 a         2512 c         2584 g         3030 t
ORIGIN      
        1 cggtggccag tttttgttga ccacttcact tccgaaagaa aagcacctga ccggcaagat
       61 ttttactcag cgcattgagc gcaataacct gacgctgaga accagaatca aacggctggc
      121 ccgcaaaacg ctctgttttt cacgttctat tgagcttcat gaaaaagtca tcggggcatt
      181 catggaaaaa tgcatgttct actaattgga tgcatcaccg ttgaaatcac aataacgatt
      241 tttttgtaaa tatgctctca catatgtagg aatagaccag gttggcattg aaacacatct
      301 atcatgacca taataaagta attttttgat atgtttatag ttttatatta attaaaacat
      361 atctaaaatt gatagtttta aaattgcaaa atccatattt tgtttgtaat gtttaatctg
      421 attatattga gtggcgttta ttatgaaaaa taaatcaggt aattcttatt atagagaagc
      481 ggtcgatatt catagctcac ttgagctttc atttatattg cataaatatc atttgcgtgt
      541 agatgagaag aaatctcgaa atgtattcag cgccatacgt gatgagctca tccttgatgg
      601 ggattcacga caaaacttag ctactttctg tcaaacatgg attgatgatg aaatccgtga
      661 gttgctaaat ttatctattg atagaaacat gatttataaa gatgaatatc cacaaatggc
      721 ggaacctgaa ggtcgctgtg tgcgtatgct ttccgattcg tggagtttcc ccgattcgcg
      781 acacacctta ggttgctcaa ccattggttc atctgaagct gctatgctcg gccgcttggc
      841 gttaaaatgg cagtggtgta aaaaacgcga agtacaaggt aaatcaaccg aacctgattt
      901 gcggtcctgt gcaaatatgc tggcataaat tctgccgtta ctgtgatgtg aaattgcgta
      961 aaatttcact ttatgatcat cgcctgataa tgaatgctga agaggttttg aagcatgtcg
     1021 atgaaaacac tattggtgtc gttacgactt taggtattac ttgtttttat ttttgtaaag
     1081 cagattgcgt tagtgttttt aagataagtg tcaagttaat attagttttt atatttatat
     1141 cgtaattata tgtttctatt ttaaaaatat tcgagagtat aaaaatgtcg aatgctaata
     1201 tcgcacccaa aagtaagaaa atgacagtgg ggacactcgc tatcatgaat ataactgctg
     1261 tagtaagtct acgatttata ccttctgaag cagaatacgg cttaggtgcc attttttact
     1321 atacctttgc tgcaattatg tttttagtac ctgttgcctt tgttgcggct gagctagcta
     1381 caacatatcc acaaaaaggg ggggcatttc gatggatagg agaagcattt ggggctcgct
     1441 ggggttttgt aggaatgctt atgacctggc tacaagtcat cccctacttt ccaacagtac
     1501 tgacatttgg tgcagtctcg gttgcattta ttgatgttga tatgggggtg gcagaatcaa
     1561 ttgccagtaa taaatggtat attttatttt tcgtactatt tgtttactgg ggagctattt
     1621 gtgttgcatt acgtggcgtt ggtattttct cgcaggtatc taagtggtgc ggtattatag
     1681 ggacaattat tccagctatt atccttgtta ttcttggttt ctcctatctg tggttcagcg
     1741 gtaaaccagc ggtgatccca ttaggttggg gtgatctttt ccctaatata gctaacttcc
     1801 agaatattgt tcttgccgcc agcatatttc ttgcttatgc agggatggaa atgaatgcgg
     1861 tccatgttaa cgatttagat aatccaacta aaaaataccc aattgcaatt accatcgctt
     1921 ctataggtac tattgcaata ttcctgctca gtactttagg ggtcgccttt attattccta
     1981 cagataaaat tagtctaact caaagtttgt tggttgccta cgatatgctg ttcgaatggg
     2041 ctggagtgcc atggcttggc tctgtgatgg catttatgct agcaattggc gtactgggtg
     2101 gggtggttac ttggattgca gggcctaata caggtgtatt agcgatcgcg aaagctggtt
     2161 atttacctaa gtttttccaa aaaaccaatc gtcatggaat ggggcaccat ctgatgtttg
     2221 tacaaggtat aattgtctca gttctttctg ttacttttgt gataatgcct tcagttcaag
     2281 cagcttttca gattttatca cagttaacag ttatgctcta tttagttatg tatatgctca
     2341 tgttcgctgg tgctatctat ctacgacatt ctcaacctga taaaaaacgc ccatatcgag
     2401 cccctgcttt attcttctgg gcaacacttg gattcttagg gtcttttctg gcttttgtat
     2461 taagttttat tccgcccgag caaatcccaa ctggtagtcc aaccagctat gttctttatt
     2521 tgttagtatt agttgcccta tttttattaa ttccaatatt aatttacgcc ttccgaaaat
     2581 ctgactggaa agatccaaac tctgatttcg aaccattttc ttgggaaaaa agaactagta
     2641 attaaatttt caataagcta caaaagatga ggttaaatat gtttagtgct gaatctccaa
     2701 ttggtgtaat agactcaggt gtaggtggat tgacatcggt aaaggaaata attaatttgc
     2761 ttcctggcga agatattatc tattgtggag ataatacgaa tgcaccttat ggcaaccgtt
     2821 ctgccgatga tatcatcagt ttgactaaaa aaatgctgac ttttttacag tcaaggaatg
     2881 tcaaactagt tgctgttgca tgtaatacta tatcctcaac tttggaatcc gaagaataca
     2941 gcggatatgc taagagcttt ccgtttccta tcttatccat cattgaacct gcagtagaag
     3001 atgtgattcg ccagcagtat aaaaatgtgg gtattatcgc taccgagttt actattaaaa
     3061 cggggtgtca caaagagcta ataaaaaaat tgaacccaac aataaatata tttggagaac
     3121 caagcaaaaa tcttgcaatg ttaattgagg aaggtaatct taatgctcct gcaatattga
     3181 atgatatcaa aaaacatgtt aaccatttaa tttccctcca tccagtaaat gaaattattc
     3241 tcggctgtac tcactatcca attgttcaga gtttatttga agcagttgca ccggatataa
     3301 aatttattaa tcctgcacat gatcaggcta tctctattaa aaatcacttg ggacagctaa
     3361 atttattaaa ctcctcaaat ataggaactt tgcaaataaa tactagtgga agtatggaga
     3421 tctacaaaac ggtactaggg gaattgagca ttacgaaacc tcatacattc agtatcaggc
     3481 agttttaaat ttatccggtg caccgtaaaa ccccgtcctt ctgaactgca ccccaaaagt
     3541 tggacaccaa ctgagtaagg tgcattttat gggcaaaccc agttacacac tgggtagtgc
     3601 atccaattag tagaacatgt gtttttcgat aaacgctccg atcacttttt cgtggatctc
     3661 aactgagcgt gagaagcaga ttgttttacg acccaaccgc ttaatgcggg tgcgtagcgt
     3721 cagattatta cgctcaatgc attgggtgaa tattttgccg gtcagatgct tattcttcgg
     3781 cacctcccgg ccatagctgc cccagtcatc gctggtcagc atgccgatgt tgaagggtgt
     3841 aagcagtgcc agtagctccc ggcacgtttg atcggttcgg ggaccaaaag tgtaggccag
     3901 tacaccgcct gttttggtgt tgtacgcgta ccagatccag tgttgccggg ctttactgcc
     3961 aacgtagctc cattgctcat caagctcgca gataaacgcc acatcagcat gggtaacagg
     4021 cgaagaagtt attcgctttg gcgcgagttt tttaaagtcc ggatgacggt gttactacca
     4081 attttcagtg tcctggcggt atcgcgaacc ccggcaccat taaaggccat ttcagtgatc
     4141 agctctttca tacccggctt acgtgcttga taagtataag tgagctgaaa cacacggtgg
     4201 cagtcacggc agcgaagtct gtcacggcag cgaagtctgt cacggccttt agggttctga
     4261 ccatggcggt aaacctgagc tgactgacaa cggggacaat gaatattaac tctggccatg
     4321 agataacctc aaaaacccgt attatacatc agattcaact aattagaggc atcacctatc
     4381 cagcattata taacatacta acaataacta aattataata atcacaactt ataatcaaat
     4441 aataaacgca taaaatcaac aatgattttt tctggttata tttatctaaa aaaacggaat
     4501 attatgtaac ttattatttt ctaagcgtaa atttattatg tggtcagact aacaaacttg
     4561 cgtaccaccc gaagaatatg cgaaaattta agtattcttt ctttttttat tttttcattt
     4621 tctcttttct tctctttccg gttctcttct tttctggttt tggttttttc ctttttattt
     4681 ttattctttc ttcagggttg tgctaaaaca ccaaaacatt tttcaccaca aaagcatcca
     4741 atcatcttgc cagaccaatc accttaaccg gatacactgc cggatataat cccactaaca
     4801 cccagccacc ccgcaccatt cctgataact accgtattca ggaagttgag ccctactcaa
     4861 ttgatgaaat gttcattgat ttgcggggga taaatcattg catctctccg gaggcttttg
     4921 gtcatcagct cagggaacag gtaaagagct ggacaggact caccatgggg gtgggcattg
     4981 cgcctacaaa aacgctggct aaaagtgcac agtgggcaac aaagcaatgg ccacagtttt
     5041 ccggtgtggt cgcgctgacg gcagaaaacc gtaattggat cttgaagcta ctggggctgc
     5101 agccagttgg tgaggtctgg ggagtaggac gcagactgac ggaaaagctg aatgcgctgg
     5161 gtattaacac agcactgcaa ctggcgcagg ctaacacggc attcatccgg aaaaacttca
     5221 gcgtcattct tgagcgtacg gtacgcgaac tcaacggcga gtccagcata tccctggaag
     5281 aagcaccacc ggcaaaacag cagattgtct gtagtcgcag ttttggtgaa cgaatcacag
     5341 acaaagatgc catgcaccag gctgttgttc agtatgcaga gcgggccgca gagaaactac
     5401 gtggggagcg tcagtattgc cggcaggtga cgacatttgt acggacatcc ccctttgcag
     5461 taaaagaacc ctgttacagc aatgccgctg tggaaaagct tccattgccc acacaggaca
     5521 gccgggacat tattgccgca gcatgcagag cgttaaacca tgtctggcgt gaagggtacc
     5581 gctatatgaa ggcaggtgtc atgctggctg atttcacacc atcgggtata gcgcagccgg
     5641 gattatttga tgaaatccag ccccgtaaaa acagtgaaaa gttaatgaaa acactcgatg
     5701 aactgaacca gtcgggaaaa gggaaagtgt ggtttgcggg gcgaggaacc gcccctgaat
     5761 ggcaaatgaa acgggaaatg ctttctcctg cgtataccac cagatggaca gatttgccag
     5821 tagcccagtt atgaatatgt aatccaccca taatgttgtt atcttgttat cttgttatct
     5881 tgttatcttg ttatcttgtt atcttaatta atctataaat caaatactta acaacttgct
     5941 aagttgttaa cataacaaaa ataattgcat gattcgcgtt cagatggcaa tattaagtta
     6001 ttaacttaac agcttaatat gaggctataa tgataatagt attaggtagt caaaagggtg
     6061 gggtaggtaa aagtacactg gcggtatcta tagctgcgta tctgatgtca ctaggcaata
     6121 gagtgattat tgtcgacgca gatgaccaga aatcagtatt aacctggtac aacaatcgcc
     6181 ctgaagatct ccctcatatt ccggttacag gcgcgacagg taacatcaaa gccatgttaa
     6241 aggaacacga aaaatcctat gattttgtta ttgcagactg tgctggccgt gatagcgcag
     6301 aaatgcgtag tggattgatg gccgcagatg tattcatttc tcctttgcgc ccatctcaga
     6361 tggacctgga tgttgtgcct catacatgct ccgtttttac agcagcaaaa gattttaatg
     6421 aggatgttcg gggatatctc gttttaaaca tgacgcccac aaatatgttt gttaatgaag
     6481 ccaatgaggc agctgaagta cttaaggatt accctgaaat gcatctggca aactcccggg
     6541 tatgtgatcg taaagcacat cgagatgctt gggccgaatc aatgacaatt tttgaaacgc
     6601 aaaatgataa agcccagcaa gaaatcgaag cgttagtgaa agaggttatt ctgtgagaaa
     6661 tagagcaaac acttcacctc gtgacgaggc agcatttatt aacggtggca cggctggcct
     6721 tgataatacc aaaaagtcat cagataaatc atcggttgta agcaaagcaa aaccagtgag
     6781 tatttctttt tttgaagaaa acctaaaaga cattgatgcc cttataacgg ctgagatggt
     6841 ttcaggtaaa ggcagagtga atcgttctga tgttgtcagg gcggcggtag aagcacttaa
     6901 aacactatca aaaacagagg tatcacgatt gatagcagaa gtaaaacaaa gataacacct
     6961 tgagataaca agataacacc ttgttatctt gttatcttgt tatcttgtta tcttgttatc
     7021 ttgttatctt gttatcttca atgtatttta ggatgaccta tgttgaatag aacctaaaac
     7081 aaaacaaata ttaatagggg tccgcttgga aaagggaaat tttcccacgc taagagaatt
     7141 gagttgaatg agtggttaca tccaggccag ctaactcact gaaccccgta cagggtcaga
     7201 cattcggtat ctccttgggg gaaccgcaga attcggaaaa aatcgtacgc taagctaacg
     7261 gtgttctcgt gacagctctt tgactaggct ttctaaggcc attctgatag ccctgacttc
     7321 ctgaaaagcc atggctaaaa tttgtgcggc taaaagggat aaccgatggt aaagtaagtt
     7381 atccctgtcg agatactgaa aagcgttatc ctcgtttttc ccaaaactgt tttgccagtt
     7441 cgctcagagc gctagttaac tgagcgacag atttcgcact ttgcaaatta ttctgcccgg
     7501 tctgtacatt ggtatcagca gcatcgcgta tattgataat actgcggttt atgtcttcac
     7561 ttactgctcc ctgctgctcg accgcagtcg ctatttgcgc gttcatgtcg gtaatttcgt
     7621 taacgcgttg gccaattcca tcaagagctg tagctgcttc ctctgcgtga gctacactcg
     7681 tgtgcgcttg ccgactactt tgctccatga ctgtaacagc ggattgcgct cgctcttgta
     7741 gagcgctgat catgctttga atatccgttg tcgattgctg tgtgcgagca gcaagactgc
     7801 gaacctcatc ggcgacaaca gcaaaaccac gcccctgctc accagcacgc gcggcctcaa
     7861 ttgctgcgtt gagtgccaac aaattcgttt gctcggcgat ccctcgtata acgtcaagaa
     7921 cttttgatat ctcgttactt tgaccttcaa gctcatgaat aacctgagtg gcttgcctaa
     7981 tttcaccttc aagggcagtg attgactggc ttgtgtgggc taccagacgc tggccagatg
     8041 ccgtctcagt gtctgctctt ccggccgcat ctgcagcatg ctgtgcattg ctcgcaacct
     8101 cttgaatgct tgccaccatt tggtttactg ccgttgctat ttgatctgtc tctgcctgct
     8161 gctcaactgt aagtacattg cttgactcaa tatcctttag taggcctcgg gtgtgttcgc
     8221 taagccgatt tgatgcatca cctatgcgac ctactatggc gcctgtttca gcttgcatca
     8281 ttcgtaaagc aaactctatt tggccaaact catcggtgcg cccagtgtag agggattgac
     8341 ttaatgggtt attggaaata ttcctggctc tttcaaccag tcttccaaga ggagagagaa
     8401 tagccaaaac actaacagag cttaagcttc ctgacattaa agtggctaac aataagctgc
     8461 ttattgatgt atcagtaagc atgccggcag ccattgcgct tgatataata ctaccccata
     8521 tgagcaagag tattttcacg gaaaagctag cagccaattt cggcctcgcg gccttcccgc
     8581 ttctcaattg agcatataat ttttccgcag ccaaaacctg ctcaggttca ggcttggtcc
     8641 ttacagactg gtattcaaca atcgaaccat tcttagctat tggcgttaca taagcactta
     8701 cccaatagtg gtcgccattt ttacagcgat tttttactag ccccatccat gagcggccag
     8761 attttaatgt actccacata tgctcaaatg cagcaggcgg catatctggg tgtcttacga
     8821 tgttgtgagg ctggcctaat agttcttcct cagtgaaacc actgatttta atgaagtcag
     8881 gattaacgta cgtgatatgg ctttgagggg aggtagtcga aagaatattg gcatcttttg
     8941 ggagttctaa gtttcgaccc gtcactggta aattctggcg cataagaacc tcaagggttg
     9001 gctgttttat tttattgttt tcggcattaa gcccaatttc ttgagcgtta cgataaagct
     9061 agcatggaaa cgataggtgc aagcaagtta agggttgcat cgcgcatgtc aatctaggct
     9121 ataccctaac ttgatgtcag gcagggccgc gccgcttcgt cagaatagag tctgctttcc
     9181 cattttttga cacatgcccg cgaaggttat agatttcagc ctgacagaaa tgggctttga
     9241 ggcacaacgg aacagaaagt gcacttaagc cgccttcaac caaggagaca tcgtgcaggg
     9301 gcaccgcatc ggctacgtcc gggtcagcag ctttgaccag aacccggaac gccagctgga
     9361 acaaacccag gtgagcaagg tgttcaccga caaggcatcg ggcaaggaca cccagcgccc
     9421 ccagctcgaa gcgctgctga gcttcgtccg cgaaggcgat acagtggtgg tgcacagcat
     9481 ggatcggctg gcccgcaacc tcgatgacct gcgtcgcttg gtacagaagc tgactcagcg
     9541 cggcgtgcgc atcgagttcc tgaaggaggg cctggtgttc actggcgagg actcgccgat
     9601 ggccaacctg atgctgtcgg tgatgggggc cttcgctgag ttcgagcgcg ccctgatccg
     9661 cgagcggcag cgtgagggca tcgccttggc caagcagcgt ggcgcgtacc ggggccgcaa
     9721 gaaagccctg tccgatgagc aggctgctac cctgcggcag cgagcgacgg ccggcgagcc
     9781 caaggcgcag cttgcccgcg agttcaacat cagccgggaa accctctacc agtacctccg
     9841 cacggacgac tgacacatgc cgcgtcgctt gatcctctcg gccacggagc gggacaccct
     9901 gcttgcgctg ccggaaagcc aggatgacct gatccgctac tacaccttca acgactccga
     9961 cctgtcgctg atccgccagc gacgcggcga cgccaaccgc ctcggcttcg ccgtgcagct
    10021 ctgcctgctg cgctaccccg gttacgcgct gggaaccgac agcgagctgc ccgagccggt
    10081 catcctgtgg gtggcgaagc aagtccaggc cgagccggcg agctgggcaa agtacggcga
    10141 gcgcgacgtg acccgtcgcg agcatgccca ggaactgcgc acctacctgc aactggcccc
    10201 gttcggcctg tccgacttcc gcgccctggt gcgcgagcta accgagctgg cccagcagac
    10261 cgacaaaggc ttgctgctgg ccggtcaggc cctggagagc ctacggcaga aacgacgcat
    10321 cctgccggcg ctgagcgtga ttgaccgggc ctgctcggaa gccattgcgc gagccaatcg
    10381 gcgggtctac cgcgccctgg tcgaaccact cacggactcg catcgggcca agctggacga
    10441 gctgttgaag ctcaaggccg gcagcagcat cacctggttg acctggctgc gccaggcacc
    10501 gctgaaaccc aactctcggc acatgctgga acacatcgag cggctgaaga catttcagtt
    10561 ggtggacttg cccgaaggcc tgggccggca catccaccag aaccgcctgc tcaagctggc
    10621 ccgcgagggt gggcagatga cgcccaaaga cctcggtaag ttcgagccgc agcgccgcta
    10681 cgcgaccctg gccgccgtgg tgctggagag caccgcgacc gtgatcgatg agctggtcga
    10741 tctgcatgac cgcatcctgg tcaagctgtt cagcggcgcg aagcacaagc atcagcagca
    10801 gttccagaag cagggcaagg cgatcaacga caaggtgcgc ctgtactcca ggatcggcca
    10861 ggcgctgctg gaagcgaagg aaagcggcag cgacccctat gccgccatcg aggcggtgat
    10921 tccctgggac gagttcaccg agagcgtcag cgaggccgag ctgctggccc ggccggaagg
    10981 cttcgaccac ctgcacctgg tcggcgagaa cttcgccacc ctgcgccgtt acacgccggc
    11041 cttgctggag gtgctggaac tgcgcgccg
//
LOCUS       DAJVUK010000141        11037 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.141, whole genome shotgun sequence.
ACCESSION   DAJVUK010000141 DAJVUK010000000
VERSION     DAJVUK010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11037
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.141"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..211)
                     /locus_tag="OQQ57_003365"
                     /pseudo
     CDS             complement(1..211)
                     /locus_tag="OQQ57_003365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            488..1363
                     /locus_tag="OQQ57_003366"
     CDS             488..1363
                     /locus_tag="OQQ57_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001224622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HCS1958008.1"
                     /translation="MRKFILISMITLASVSLGACRQNATIKQDAPGQKAFLIDGQIYD
                     LHSGKIISSSELLADLATARHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEML
                     TSDQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNA
                     NIGREQMLALYKKNEFPKGKKSTAPVVQEALRETIIAMHEGNLESQQLTSMLSVQQQR
                     DRYMARQLLSAPVPSLLIAGGYHASKNMGVPLHMEDLATGTHPVVLMLAEKGMNITVD
                     HADYVWFVAPDTTKR"
     gene            1371..2147
                     /locus_tag="OQQ57_003367"
     CDS             1371..2147
                     /locus_tag="OQQ57_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000981087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HCS1958009.1"
                     /translation="MMNILHFPQSVKWSSWFICSLLLHGLIFLTFIWRFSEVQPAMSP
                     APAIMLQWAEIIEAPSSPLSLPVGIAQQESAVTEEKQQTEDRQQRPVTEDSDATIEIT
                     RKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSSNAAPQALVESSRIAAPFNSDSTKRD
                     NSEASWESRVKGHLNRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGTLS
                     LDREAIAVLERAQPLPKPPPEILEGGLFKVKMPITFKLKE"
     gene            2316..4577
                     /locus_tag="OQQ57_003368"
     CDS             2316..4577
                     /locus_tag="OQQ57_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HCS1958010.1"
                     /translation="MNVIKLAIGSGILLLSCGAYSQSISEKTNSDKKGAAEFSPLSVS
                     VGKTTSEQEALEKTGATSSRTTDKNLQSLDATVRSMPGTYTQIDPGQGAISVNIRGMS
                     GFGRVNTMVDGITQSFYGTSTSGTTAHGSTNNMAGVLIDPNLLVAVDVTRGDSSGSEG
                     INALAGSANMRTIGVDDVIFNGNTYGLRSRFSVGSNGLGRSGMIALGGKSDAFTDTGS
                     IGVMAAVSGSSVYSNFSNGSGINSKEFGYDKYMKQNPKSQLYKMDIRPDEFNSFELSA
                     RTYENKFTRRDITSDDYYIKYHYTPFSELIDFNVTASTSRGNQKYRDGSLYTFYKTSA
                     QNRSDALDINNTSRFTVADNELEFMLGSKLMRTRYDRTIHSAAGDPKANQESIENNPF
                     APSGQQDISALYTGLKVTRGIWEADFNLNYTRNRITGYKPACDSRVICVPQGSYDIDD
                     KEGGFNPSVQLSAQVTPWLQPFIGYSKSMRAPNIQEMFFSNSGGASMNPFLKPERAET
                     WQAGFNIDTRDLLVEQDALRFKALAYRSRIQNYIYSESYLVCSGGRKCSMAEVIGNDW
                     EGISDEYSDNMYIYVNSASDVIAKGFELEMDYDAGFAFGRLSFSQQQTDQPTSIASTY
                     FGAGDMTELPRKYMTLDTGVRFFDNALTLGTIIKYTGKARRLSPDFEQDEHTGAIIKQ
                     DLPQIPTIIDLYGTYEYNRNLTLKLSVQNLMNRDYSEALNKLNMMPGLGDESHPANSA
                     RGRTWIFGGDIRF"
     gene            4646..5821
                     /gene="senB"
                     /locus_tag="OQQ57_003369"
     CDS             4646..5821
                     /gene="senB"
                     /locus_tag="OQQ57_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterotoxin production-related protein TieB"
                     /protein_id="HCS1958011.1"
                     /translation="MNIFTLSKAPLYLLISLFLPTMAMAIDPPERELSRFALKTNYLQ
                     SPDEGVYELAFDNASKKVFAAVTDRVNREANKGYLYSFNSDSLKVENKYTMPYRAFSL
                     AINQDKHQLYIGHTQSASLRISMFDTPTGKLVRTSDRLSFKAANAADSRFEHLRHMVY
                     SQDSDTLFVSYSNMLKTAEGMKPLHKLLMLDGTTLALKGEVKDAYKGTAYGLTMDEKT
                     QKIYVGGRDYINEIDAKNQTLLRTIPLKDPRPQITSVQNLAVDSASDRAFVVVFDHDD
                     RSGTKDGLYIFDLRDGKQLGYVHTGAGANAVKYNPKYNELYVTNFTSGTISVVDATKY
                     SITREFNMPVYPNQMVLSDDMDTLYIGIKEGFNRDWDPDVFVEGAKERILSIDLKKS"
     gene            6280..6630
                     /locus_tag="OQQ57_003370"
     CDS             6280..6630
                     /locus_tag="OQQ57_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCS1958012.1"
                     /translation="MPSGRHTARIRTGHDSGTVSPFVHSTLSPLVPVYPVFITVIADH
                     DKPQPSGCLLESQGSLCPICRQRITHETGWNVHHKVKKVMGGGEELSNLVLLHPNCHR
                     QLHSCEAGSLKKGL"
     gene            6773..6994
                     /locus_tag="OQQ57_003371"
                     /pseudo
     CDS             6773..6994
                     /locus_tag="OQQ57_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(7015..7077)
                     /locus_tag="OQQ57_003372"
                     /pseudo
     CDS             complement(7015..7077)
                     /locus_tag="OQQ57_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            7528..8940
                     /gene="ospC1"
                     /locus_tag="OQQ57_003373"
     CDS             7528..8940
                     /gene="ospC1"
                     /locus_tag="OQQ57_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC1"
                     /protein_id="HCS1958013.1"
                     /translation="MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDE
                     KNLKDSANIIKDFFRKTIAAQSYSRMFSQGSNFKSLNIAIDAPSDAKASFKAIEHLDR
                     LSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQSNSDLSDKILNIKSFNKIQSE
                     GICTKRNTYADDIKKIANHDFVFFGVEISSHQKKHPLNTKHHTVDFGANAYIIDHDSP
                     YGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMK
                     LGLGLYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKK
                     VKIREISLEEAVTASNYEEINKQVTNKKIALQTLFLSITNQKEDVALYILSNFEITRQ
                     DVISIKHELYDIEYLLSAHNSSCKVLEYFINKGLVDVNTKFKKTNSGDCMLDNAIKYE
                     NAEMIKLLLKYGATSDNKYI"
     gene            complement(9044..9192)
                     /locus_tag="OQQ57_003374"
                     /pseudo
     CDS             complement(9044..9192)
                     /locus_tag="OQQ57_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            9268..10965
                     /gene="ospD3"
                     /locus_tag="OQQ57_003375"
     CDS             9268..10965
                     /gene="ospD3"
                     /locus_tag="OQQ57_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspD3"
                     /protein_id="HCS1958014.1"
                     /translation="MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKR
                     SFLLNLNCQVTDHSGKLIVCRHLASYWIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEE
                     EKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRALEISTSNHNMALGLKIKETK
                     NGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGLISDGMSIF
                     VDRHTPTSMSSIIRWPNNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLL
                     AAKNDDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQ
                     ALQNGHAETIKTYGRLLKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHAD
                     AIRAYGELILSPPLLNSEDIVNLLASRRYDNVPGLLLALNNGQADAILAYGDILNEAK
                     LNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKILHTADLTPHQASKLLAAEG
                     PNGVSGLIIAFQNRNFEAIKTYMGIIKNENITPEEIAEHLDKKNGSDFLEIMKNIKS"
BASE COUNT         3394 a         2352 c         2349 g         2942 t
ORIGIN      
        1 ggatgtgctg tttcagcctc gcgaccagct cacgctgtgt cagcgtttcc gtcgccgttt
       61 ctcccgtttt gtggtccagg taacggaagc tcaggctcgc ccctccgttg taatgtgcca
      121 gccgggaggc cgctatcggc ggcttcttca gataacgacc caggtagcgc gccgtattcc
      181 tcccgccggc cattttcttc gacatgtaca tcaggcgcgg aactcatcgg ggcgcgggaa
      241 tgaaatccca ttcagactcc ggatagattc aagcaagccc acttatcgtc aaaatcggtg
      301 ttgcaaaaac gggagtgacc atagatccgt tttccaagcg gaccccataa tatcggctgg
      361 taaacatcac tcgctagtgc attctttttg ttggtaatga taattattta catttattct
      421 ttgatgtttt atcataatta atgttttatc aataaatata tggaaatata ttgtttcaga
      481 tgggaatatg agaaagttca tccttatttc tatgataacg ttagctagtg ttagtctggg
      541 agcctgcaga cagaatgcca ccataaagca ggatgcgcca gggcagaaag ctttcctgat
      601 tgacgggcag atttacgatt tgcacagtgg caaaattatt tctagcagcg agcttttggc
      661 ggatcttgct accgctcgac atcttattat tggtgaaaaa cacgataatg ccgagcatca
      721 tcagattgag ctttggctta ttcaaaatct gctcatccag cgaccacagg ggagtgtgtt
      781 gcttgagatg ttgacgtcag accaacagcc ccgagttaac caagttaaat gttggctgaa
      841 agataatcct gtggttcgag atagccgtgt tcaggaacta cttaactggc aaaaagggtg
      901 gtcctgggag atgtatggcg acatcgtcat gcagctatta cgtgggcctt acccgctgct
      961 caatgccaac attggccggg agcagatgtt ggcactgtac aaaaaaaacg aatttcctaa
     1021 aggaaaaaaa tccactgcac ctgtggtaca agaagctctg cgtgaaacca tcatagctat
     1081 gcatgaaggc aaccttgaaa gccagcaact gacgtcaatg ctctctgttc agcagcagcg
     1141 ggatcgctac atggcccgcc agcttctgag tgccccggta ccgtcgttgt tgattgcagg
     1201 tggttatcac gcgtcaaaaa acatgggcgt accgttacac atggaagatc ttgccaccgg
     1261 cacccatcca gtggtgttga tgcttgcaga aaaaggaatg aacatcacag tagatcatgc
     1321 tgactacgtg tggtttgtag cgccagatac aacaaaaagg taaaccatgg atgatgaata
     1381 ttctccactt cccacagtcg gtaaaatgga gcagctggtt tatctgttct ctactgcttc
     1441 atggactgat tttccttacg tttatctggc gtttttccga agttcagccc gctatgtctc
     1501 ctgcaccggc gatcatgctg caatgggcag aaattataga ggctccttct tctccacttt
     1561 cgcttccggt gggaatcgct caacaggagt ccgcagtgac agaagaaaag caacaaactg
     1621 aggacagaca acaacgtcct gtcactgaag acagtgatgc aaccattgaa ataactagga
     1681 agaaaaagtc atccgatgga gaaaagaaaa agacacgtcc acctcgtaag ataaaggctc
     1741 aaaccagcga cagcaacccc acagccgttt ccagtaatgc tgcacctcag gctctggtcg
     1801 aatcgtcccg tattgctgcg ccttttaaca gtgactcaac aaagcgagat aattctgagg
     1861 catcttggga aagcagagta aaaggccacc ttaaccgtta taaacgttac cctggcgatg
     1921 ccagaaaacg tgcacgaacc ggcacagccg ttgtgacttt taccgtaaac acggaaggca
     1981 ctattgtcag tagtttcttg gaaatctcgt caggaaccct ttctcttgac cgcgaagcta
     2041 ttgctgtttt agaacgcgct caaccacttc ccaaaccacc gcctgaaata ttggagggag
     2101 gattatttaa agtaaaaatg ccgattacct ttaagttgaa ggagtaaagg gataattggc
     2161 cgttcaagtt catttaactg aaatttaatt ttcattttta tgctgaacat tttatcaaac
     2221 ttttccactg tcgaaaaaat caaaaagaca gtagatcata attaataaac aaatagttat
     2281 acttatcttt attaatatta tatccaagga aatttatgaa cgttataaaa ctggctatcg
     2341 gctcaggcat attattgctc agctgcggtg cttactcaca atccatcagt gaaaaaacta
     2401 attccgacaa aaaaggagcg gcagaattca gtccgctcag cgtttctgtc gggaagacga
     2461 ccagtgagca ggaagctctc gagaaaacag gcgcgaccag ttcccggaca acggacaaaa
     2521 acctgcaatc acttgacgca acagtgcgta gtatgcctgg tacttatact caaatagatc
     2581 ctggtcaggg agcaatcagt gtgaatattc gaggcatgag cggatttggt cgtgtaaaca
     2641 ctatggtcga tggtattacc cagagttttt acggaacctc tacctccgga acaacggcgc
     2701 atggttcaac taacaatatg gctggcgtac ttatagatcc taacttactg gtagcagttg
     2761 atgttacacg cggtgacagc agtggctctg aagggatcaa cgcccttgcc ggtagtgcaa
     2821 atatgcgtac tattggcgtt gacgatgtaa tatttaacgg taatacatat ggccttcgtt
     2881 cacgtttctc tgtcggtagt aatgggctgg gacgcagcgg aatgatcgcc cttggtggaa
     2941 aaagcgacgc ttttacggat acgggaagca ttggcgttat ggctgctgtg agtggcagtt
     3001 ctgtgtactc taatttctca aatggttctg gaattaacag caaagagttt ggttatgata
     3061 aatatatgaa gcagaacccc aaatcccaac tgtataaaat ggatatcaga ccagacgaat
     3121 ttaacagctt cgaactttcc gctcgaacct atgaaaataa atttacacgt cgtgatataa
     3181 ccagtgacga ctattacatt aaatatcatt acaccccttt ttctgaatta attgacttta
     3241 acgtaacggc cagtaccagt cgcggtaatc aaaagtatcg tgatggctcg ctgtatactt
     3301 tctacaaaac ctcagcgcaa aatcgttctg acgcgctgga tatcaacaat accagccggt
     3361 tcactgtcgc ggacaatgaa ctggagttta tgctgggcag caaactgatg cgtacccgct
     3421 atgaccggac cattcactca gcggcgggcg acccgaaagc gaatcaggaa tcgatcgaga
     3481 acaatccgtt cgcaccctcc ggccagcagg atatttcagc gctgtatacc gggctgaagg
     3541 ttacgcgcgg catctgggag gcagatttca atctcaacta cacacgtaac aggatcacag
     3601 ggtacaagcc cgcctgcgat tcacgcgtta tctgcgtgcc acagggtagc tacgatattg
     3661 acgataaaga gggtggcttc aacccttcag ttcagctttc tgctcaggta acaccatggc
     3721 ttcagccgtt cattggctac agcaaatcca tgcgcgcccc gaacatccag gagatgttct
     3781 tctctaattc aggaggcgca tccatgaacc cattcctgaa gcctgaacgt gcagaaacct
     3841 ggcaggcggg ttttaacatt gataccagag atttactggt cgaacaggat gccctgcgct
     3901 ttaaggctct ggcgtaccgc agcaggatcc agaactacat ctacagcgag tcttatctgg
     3961 tttgttctgg aggtcgtaaa tgcagtatgg ctgaggtgat tggcaatgac tgggagggca
     4021 ttagcgatga atacagcgac aatatgtaca tctacgttaa ctcggcaagc gacgttattg
     4081 caaagggctt cgaactggag atggattatg atgcaggttt tgcttttggc cgactctctt
     4141 tcagccagca gcaaacagac cagccaacct ccatcgccag cacctacttt ggcgcagggg
     4201 atatgaccga actgcccaga aaatacatga cgctggatac tggtgttcgc ttcttcgata
     4261 acgcgttgac cctgggcact atcataaaat acacaggcaa ggctcgtcgc ctgtcgcctg
     4321 attttgagca ggacgaacat accggcgcaa taatcaaaca ggatttgccg cagatcccaa
     4381 cgattatcga tctctatggt acttacgagt acaaccgcaa cctgacactg aaactttcgg
     4441 tacaaaacct gatgaacaga gattattcgg aggcgctgaa taagctcaac atgatgccag
     4501 gtcttggtga cgagagccac ccagccaatt ccgcgcgtgg cagaacatgg atatttggcg
     4561 gggacattcg tttctgatga caatttccgc caggttcaga caatacgttt tctctcttat
     4621 gtcaatttta ttgcaggaac gaaaaatgaa tattttcact ttatccaaag caccgctata
     4681 cttgttaatt tcactatttt tacccacgat ggccatggct atcgatccac ctgaacgcga
     4741 actttcgcga tttgccctga aaacgaatta ccttcagtcc cctgatgaag gcgtctatga
     4801 actggcgttt gataatgcca gtaaaaaggt gtttgcagca gtcaccgatc gtgtaaatcg
     4861 tgaagccaat aaaggctatc tgtattcgtt taattcagat tcgctgaaag tcgaaaataa
     4921 atacacgatg ccataccggg cattttcgct ggcgataaat caggataaac atcagctcta
     4981 tatcggacac acccagtcag cgtccctgcg tatcagtatg tttgacaccc caaccggtaa
     5041 actggtaaga accagcgaca ggttaagttt taaagcggca aacgctgcag attcgcgttt
     5101 tgagcatttg cgccatatgg tttacagcca ggattccgat accctgtttg tgagttatag
     5161 caatatgctg aaaacggccg agggcatgaa gcctctgcat aagctgttaa tgctcgacgg
     5221 gacgacgctt gccttaaaag gcgaggttaa ggatgcttac aaaggtacag cgtatggtct
     5281 gacgatggat gaaaaaacac agaaaatcta cgttggcgga agagattaca tcaacgaaat
     5341 tgatgcgaaa aatcagacgc tgctgcgtac catcccgttg aaagatccga gaccacaaat
     5401 cacaagtgtg cagaatctgg cggtggactc cgcttctgac cgtgcctttg tggtggtatt
     5461 cgaccatgac gatcgttccg gtacaaaaga tggcctctat atttttgact tacgcgacgg
     5521 taaacagctt ggctatgtgc acacaggagc cggagctaac gcggtgaaat acaatccgaa
     5581 atataacgaa ctgtatgtca ccaacttcac tagcggcacc atcagcgtag tggatgccac
     5641 caaatacagc atcacccgtg aatttaacat gccggtctac ccaaaccaga tggtgttgtc
     5701 ggacgatatg gatacccttt acattggcat caaagaaggc tttaaccgcg attgggatcc
     5761 tgatgtgttt gtggaaggag ctaaagaacg tattctgagc attgatttga aaaagtcgtg
     5821 atcgggggaa aaaacatggg ataaaaactc cgttattcca ctaaactggc cggactagga
     5881 aaagcaaaca tctctgtcct gccggtacgc ctgttacgcc gctccatgag gctgaggaat
     5941 ctccagaaaa cgagacaggc acagcattgt acgatcaact gatttgtgcc aataattcaa
     6001 tgaaatcaca gctatgcctg ttcacgtata ggaaattgaa aaactaagcg ataccactgt
     6061 ccgcgtctta tgcctcgtgc ggtaagctgt ttttcacatc acgccggtgt ttttttcttt
     6121 ctgtggacgg ttttaatact gtaatcggcc gttttttata cttaccccga ttcccgggcg
     6181 cacttatcct gcatcacccc gggatatacc tcagcagact gatatcccgc gcgtttttct
     6241 tcagcccctc cacattcagt cccgcgatgg cccggcggta taccatccgg ccgccacaca
     6301 gcacgcattc gaacgggtca cgactcagga actgtttcac catttgtgca tagcacactt
     6361 tcgccactgg ttccggttta tcctgttttt ataacggtaa ttgcagacca tgacaaaccg
     6421 cagccgtcag gctgcctact cgagtcacaa ggctctctgt gtccgatatg ccggcagcgc
     6481 attacccatg aaactggctg gaacgtacac cataaggtga agaaagttat ggggggcggt
     6541 gaagaattat ctaaccttgt cttgttacat ccaaattgcc atcgacagtt acacagttgt
     6601 gaagccggct ctctcaaaaa gggcttataa aggcttgagc ggtgtaccgg gaaaccggta
     6661 tgcaccgttc ttaggggagg gcagtccagc aatgaactgt ccttacccga caaacatcca
     6721 aaacgaacgg aacgtgctgg aatccgcata taacccgttg taaagtgagg aaatggacac
     6781 ctcacttgct catgagaacg cccgcctgcg ggcactgttg cagacgcaac aggacactat
     6841 ccaccagatg gctgaataca accgcctgct ctcacagcgg atggcggctt atgcttccga
     6901 aatcaaccga ctgaaggcgc tggttgcgaa actgcagcgt atgcagttcg gtaaaagccc
     6961 agaaaaactt cgcgcaaaaa ccgaacggca gattccattt tcacgggcga tctacgccac
     7021 acaggctctg ggttgcagtg actgctccat taaggcgatt ttgaactcat aagggaagta
     7081 acaaaaaaac tgcaaaagta caataattat atatggccaa actaacctct attaaaaaaa
     7141 catcagtttt tcacacttag ttgagcttca tgaaaaaatc atcgaggatt tcattgcaga
     7201 atacacattc cactaactgg aagcactcca taagaggaat cagagaaagt atcgtttttt
     7261 tatagtaaaa ttcattgctg ttcaataaaa ttgatataat tattaaatta tggaaataat
     7321 ttcacaaaaa agattaactt gagttcttaa gcatcggatt ttagatattt tgaaatatct
     7381 ggcatcacat aacatcaaaa gtatataata cccttatcta attacatgca gtatattgta
     7441 tatatactca aaaattgtaa ttcataccct actatatctt gtggggaaag atattaatta
     7501 aaactgtttt catataaggt tcattttatg aatatatcag aaacactgaa ctcagcaaat
     7561 acccaatgca atatagattc tatggataac agattacata cattgtttcc aaaagtgaca
     7621 tcagtgcgaa acgctgcaca acaaactatg ccagatgaaa aaaatttaaa agatagtgca
     7681 aatattatta aagatttctt taggaaaact atagcagcac aaagttatag tagaatgttc
     7741 tctcaaggct ctaactttaa atctttaaat atagcaattg atgcaccatc agacgctaaa
     7801 gcctcattta aggctattga gcaccttgac agattatcga agcattatat atctgaaata
     7861 agggaaaaac ttcatcctct ttctgcagag gaactcaatt tgctttcgct aattattaat
     7921 tctgatttaa tcttcagaca tcaaagtaat tctgatttgt ctgataaaat tttaaacatt
     7981 aagtcattca ataaaattca gtctgaagga atatgcacaa aacgaaacac atacgctgat
     8041 gatataaaaa aaatagctaa tcatgacttt gtgttttttg gcgttgaaat ctctagccat
     8101 cagaaaaaac accccctgaa tacaaaacat cacactgttg attttggtgc aaatgcgtat
     8161 atcattgatc atgactctcc atatggatat atgacattaa ccgatcactt tgataatgct
     8221 attccacctg ttttttacca tgagcaccaa tcatttttag ataaattttc agaggttaat
     8281 aaagaagtta gtcgatacgt acatggaagt aaaggaatta tagatgtacc aatattcaat
     8341 actaaagata tgaagttagg gctcggatta tacctgattg actttattag aaaaagtgaa
     8401 gaccaaagct tcaaggagtt ttgctatgga aaaaatcttg cccctgtgga tctggataga
     8461 atcataaact ttgtttttca gccagagtac catataccta ggatggtaag tacagaaaac
     8521 ttcaaaaaag ttaagattag agaaatatcc ttagaggagg ctgttacagc atctaattac
     8581 gaagaaatta acaagcaggt cactaacaaa aaaattgctc tccagactct ttttctttcg
     8641 attactaatc aaaaagagga tgtcgcctta tatatattat ctaattttga gataactaga
     8701 caagatgtta tttccataaa gcatgagttg tatgatattg agtatctact tagcgctcat
     8761 aattcaagct gtaaagtact tgagtatttt atcaataagg ggttggttga tgtaaacaca
     8821 aagttcaaaa aaactaatag tggggattgt atgttggata acgcaataaa atatgagaat
     8881 gcagaaatga taaaactatt attgaaatat ggtgcaacat ctgacaataa atatatttaa
     8941 tcaaaattga atatcgttta gcaaaaggca gtatttgcac aaaatatcga tatattgttt
     9001 attgtcagta tggctcaatg tgataatagt tggaaagttt gatgggtttc gccccgttgt
     9061 agcggtagtc gagctggaag gtcttcaggc actgcttaca gcgatagagc agcccccctg
     9121 aactggaatg gccgttccgg ataccccctg agtttcagag taacggggac aaaccacatc
     9181 aatctttgcc atcaatcatc caaagggcaa agagtacaac aacactaagt ctgcgtcaca
     9241 acccatcaat gaaaggaata tatacatatg ccatcagtaa atttaatccc atcaaggaaa
     9301 atatgtttgc aaaatatgat aaataaagac aacgtctctg ttgagacaat ccagtctcta
     9361 ttgcactcaa aacaattgcc atatttttct gacaagagga gttttttatt aaatctaaat
     9421 tgccaagtta ccgatcactc tggaaaactt attgtctgtc gacacttagc ttcctactgg
     9481 atagcacagt ttaacaaaag tagtggtcac gtggattatc atcactttgc ttttccggat
     9541 gaaattaaaa attatgtttc agtgagtgaa gaagaaaagg ctattaatgt gcctgctatt
     9601 atttattttg ttgaaaacgg ttcatgggga gatattattt tttatatttt caatgaaatg
     9661 atttttcatt ccgaaaaaag cagagcacta gaaataagta catcaaatca caatatggca
     9721 ttaggcttga agattaaaga aactaaaaat gggggggatt ttgtcattca gctttatgat
     9781 cccaaccata cagcaactca tttacgagca gagtttaaca aatttaactt agctaaaata
     9841 aaaaaactga ctgtagataa ttttcttgat gaaaaacatc agaaatgtta tggtcttata
     9901 tccgacggta tgtctatatt tgtggacaga catactccaa caagcatgtc ctccataatc
     9961 agatggccta ataatttact tcaccccaaa gttatttatc acgcgatgcg tatgggattg
    10021 actgagctaa tccaaaaagt aacaagagtc gtacaactat ctgacctttc agacaatacg
    10081 ttagaattac ttttggcagc caaaaatgac gatggtttgt caggattgct tttagcttta
    10141 caaaatgggc attcagatac aatcttagca tacggagaac tcctggaaac ttctggactt
    10201 aaccttgata aaacggtaga actactaact gcggaaggaa tgggaggacg aatatcgggt
    10261 ttatcccaag cacttcaaaa tgggcatgca gaaactatca aaacatacgg aaggcttctc
    10321 aagaagagag caataaatat cgaatacaat aagctgaaaa atttgctgac cgcttattat
    10381 tatgatgaag tacacagaca gatacccgga ctaatgtttg ctcttcaaaa tggacatgca
    10441 gatgctatac gcgcatacgg tgagctcatt cttagccccc ctctcctcaa ctcagaggat
    10501 attgtaaatt tgctggcctc aaggagatat gacaatgttc ccggacttct gttagcattg
    10561 aataatggac aggctgatgc aatcttagct tatggtgata tcttgaatga ggcaaaactt
    10621 aacttggata aaaaagcaga gctgttagaa gcgaaagatt ctaatggttt atctggattg
    10681 tttgtagcct tgcataatgg atgtgtagaa acaattattg cttatgggaa aatacttcac
    10741 actgcagacc ttactccaca tcaggcatca aaattactgg cggcagaagg cccaaatggg
    10801 gtatctggat taattatagc ttttcaaaat aggaattttg aggcaataaa aacttatatg
    10861 ggaataataa aaaatgaaaa tattacacct gaagaaatag cagaacactt ggacaaaaaa
    10921 aatggaagtg attttctaga aattatgaag aatataaaaa gctgaatatt atctcgtggt
    10981 gatacactga atttgaggta accggctcat ttaaaccgtc tggtctgtta cctccgg
//
LOCUS       DAJVUK010000142        10902 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.142, whole genome shotgun sequence.
ACCESSION   DAJVUK010000142 DAJVUK010000000
VERSION     DAJVUK010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10902
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.142"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..184
                     /locus_tag="OQQ57_003376"
     CDS             <1..184
                     /locus_tag="OQQ57_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415678.1"
                     /note="interacts RssB preventing the degradation of the
                     stress sigma factor RpoS; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HCS1958015.1"
                     /translation="KLGIILQEKEYPITIYNIAPFNKNLWSLLKSSQECPPGESKITN
                     KCLHNSCIIKICSICY"
     gene            complement(252..1502)
                     /gene="icd"
                     /locus_tag="OQQ57_003377"
     CDS             complement(252..1502)
                     /gene="icd"
                     /locus_tag="OQQ57_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HCS1958016.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGEAIIENM"
     gene            1674..2327
                     /gene="rluE"
                     /locus_tag="OQQ57_003378"
     CDS             1674..2327
                     /gene="rluE"
                     /locus_tag="OQQ57_003378"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HCS1958017.1"
                     /translation="MRQFIISENTMQKTSFRNHLVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYTLDNLANGEWREATE"
     gene            2337..2798
                     /gene="nudJ"
                     /locus_tag="OQQ57_003379"
     CDS             2337..2798
                     /gene="nudJ"
                     /locus_tag="OQQ57_003379"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HCS1958018.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILKASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
     gene            2852..3958
                     /gene="mnmA"
                     /locus_tag="OQQ57_003380"
     CDS             2852..3958
                     /gene="mnmA"
                     /locus_tag="OQQ57_003380"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HCS1958019.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCSVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            3994..4635
                     /gene="hflD"
                     /locus_tag="OQQ57_003381"
     CDS             3994..4635
                     /gene="hflD"
                     /locus_tag="OQQ57_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HCS1958020.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVPAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            4639..6009
                     /gene="purB"
                     /locus_tag="OQQ57_003382"
     CDS             4639..6009
                     /gene="purB"
                     /locus_tag="OQQ57_003382"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HCS1958021.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            6177..6848
                     /gene="phoP"
                     /locus_tag="OQQ57_003383"
     CDS             6177..6848
                     /gene="phoP"
                     /locus_tag="OQQ57_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HCS1958022.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            6848..8308
                     /gene="phoQ"
                     /locus_tag="OQQ57_003384"
     CDS             6848..8308
                     /gene="phoQ"
                     /locus_tag="OQQ57_003384"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HCS1958023.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            8384..9505
                     /gene="roxA"
                     /locus_tag="OQQ57_003385"
                     /gene_synonym="ycfD"
     CDS             8384..9505
                     /gene="roxA"
                     /locus_tag="OQQ57_003385"
                     /gene_synonym="ycfD"
                     /EC_number="1.14.11.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[50S ribosomal protein L16]-arginine
                     3-hydroxylase"
                     /protein_id="HCS1958024.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(9554..10780)
                     /gene="pepT"
                     /locus_tag="OQQ57_003386"
     CDS             complement(9554..10780)
                     /gene="pepT"
                     /locus_tag="OQQ57_003386"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HCS1958025.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLAGMKGTVERADMH
                     YIIRDFDRKQFEARKCKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRK"
BASE COUNT         2697 a         2786 c         2726 g         2693 t
ORIGIN      
        1 taagcttggt attatccttc aggaaaaaga atatcctatt actatttata acattgcacc
       61 attcaacaag aatttatgga gtttactcaa aagcagtcaa gagtgtcctc caggagaaag
      121 caaaataaca aataaatgtt tacataatag ttgcattata aaaatatgct cgatatgcta
      181 ttaataatat ccacataaat aaaacaacgg gcgtgttata cgcccgtttc aatatttaac
      241 tcatggagag attacatgtt ttcgatgatc gcttcaccaa actctgaaca tttcagcagc
      301 ttagcgcctt ccatcagacg ttcaaagtca taagttacgg ttttcgcgtt gatagcacct
      361 tccatacctt taacaattaa atcagccgct tcagtccacc ccatatggcg cagcatcatc
      421 tcagcggaga ggatgataga gcctggattt actttgtcct gaccggcgta tttcggcgca
      481 gtaccgtggg tggcttcaaa cagggcgcat tcgtcaccga tgtttgctcc aggagcgata
      541 ccgataccgc caacctgcgc tgccagggcg tcagaaatgt agtcaccgtt caggttcata
      601 caggcgataa catcatattc agccggacgc agcaggatct gttgcaggaa tgcatcagca
      661 atcacgtctt taatgacgat ctctttgccg gtgttcgggt ttttaacttt cagccacggg
      721 ccgccgtcga tcagttcacc gccaaactct tcacgcgcca gctggtagcc ccagtcttta
      781 aacgcgcctt cggtgaactt catgatgttg cctttgtgca ccagagtcac agagtcacga
      841 tcgttagcaa ttgcgtattc gatcgctgca cgaaccagac gtttggtgcc ttcttccgaa
      901 cacggcttaa taccgatacc acaatgttcc gggaagcgaa ttttcttcac ccccatctct
      961 tcacgcagga atttaatcac tttctcggcg tcggcagagt ctgctttcca ttcgataccc
     1021 gcataaatgt cttccgagtt ttcacggaag ataaccatat cggtcagttc agggtgttta
     1081 accgggcttg gagtgccctg atagtaacgt accggacgca ggcagatgta gagatccagt
     1141 tcctggcgca gggcaacgtt cagagagcga ataccgccac caacaggagt ggtcagcgga
     1201 cctttaatgg caacgcgata ttcacgaatc agatcaaggg tttcagcagg cagccagaca
     1261 tcctgaccat aaacctgtgt ggatttttca ccggtgtaaa tttccatcca ggagatttta
     1321 cgctcgcctt tataggcttt ctcgactgca gcgtcgacca ctttcagcat ggctggggtt
     1381 acatctacac cgattccatc accttcaatg taagggataa tcggattttc aggaacgttg
     1441 agtttgccgt tttgcagggt gatcttcttg ccttgtgccg gaacaactac tttactttcc
     1501 attcacctct ccttcgagcg ctactggttt gctcgtctgc caccacgttg catatgcgtt
     1561 tgcgtcctgc gatacggatg ctttagagca attttttgtt aatgatttgt aattggcttg
     1621 tcaatactac cctattgttt gccgtcatga aagatgcgcg ttattaggct ataatgcggc
     1681 aattcataat ctctgaaaat accatgcaaa aaacttcttt tagaaatcac ctggttaagc
     1741 gattcagctc gcaacgttct accaggcgta aacctgaaaa ccagcccacg cgtgtgatcc
     1801 tgttcaataa accctacgat gttcttccgc agttcaccga tgaagccgga cgcaaaacat
     1861 taaaagaatt catcccggtt cagggcgttt atgcagcagg tcgtcttgac cgcgatagcg
     1921 aagggttact ggtgctgacc aataacggcg cgttgcaggc gcgtttaacc cagccgggca
     1981 aacgcaccgg gaaaatctat tatgtgcagg tggaaggtat tcccacacaa gacgcacttg
     2041 aagccttgcg caatggcgta accttaaatg atggccctac cctgcccgcc ggcgcggagc
     2101 tggttgacga accagcgtgg ttatggccgc ggaatccacc aattcgtgaa cgcaaaagta
     2161 ttcccaccag ctggctgaag atcaccttat atgaaggacg taatcgccag gtgcgccgca
     2221 tgaccgccca tgttggtttc cccacgctgc gactgattcg ttatgcgatg ggtgattaca
     2281 ctttggataa ccttgccaat ggcgaatggc gagaagcaac agaataagga tgcacaatgt
     2341 ttaaaccaca cgttaccgtt gcttgcgtag tgcacgcaga gggtaaattt ttagtcgttg
     2401 aagagacgat taatggtaaa gcgttatgga accaacctgc cgggcatctg gaagccgatg
     2461 aaaccttagt ggaagctgcc gcccgtgagc tatgggaaga aaccggcatc agcgcgcaac
     2521 cgcaacactt tattcgtatg catcagtgga ttgcgccaga taaaacgccg tttttgcgtt
     2581 tcctctttgc cattgagctt gagcaaatat gcccgaccca gcctcatgac agcgatatcg
     2641 actgctgtcg ttgggtcagc gccgaagaaa ttttaaaggc gtcaaatctt cgttcgccgc
     2701 tggtggcgga aagtatccgt tgttatcaaa gcgggcaacg ctatccgctg gagatgattg
     2761 gcgattttaa ctggcctttt acaaagggtg tcatctaaaa ggctgcgtga tagaatacgc
     2821 cgccttgaag ttcaatgtcg tgagtgatcc aatgtctgaa accgcaaaaa aagtaatcgt
     2881 cggcatgtcc ggcggtgtcg attcctccgt ttctgcctgg ctgttgcaac aacagggata
     2941 tcaggttgaa ggcctgttta tgaagaactg ggaagaagac gacggtgagg aatattgcac
     3001 agcggcagcg gatctggctg atgcccaagc tgtctgcgac aagctcggca ttgaactgca
     3061 caccgttaac tttgctgccg agtactggga caacgtcttc gaactgttcc ttgccgaata
     3121 taaagccggt cgcacgccga atccggatat tctgtgcaac aaagagatca aatttaaagc
     3181 tttcctcgaa tttgccgccg aagatttagg tgccgattat atcgctaccg gtcattacgt
     3241 acgtcgggcc gatgtcgatg gcaagagccg cctgctgcgt ggtctggaca gcaataaaga
     3301 ccagagctac ttcctttata cgctcagcca tgagcagatt gcgcaaagcc tgttcccggt
     3361 cggcgaactg gaaaaaccgc aggtgcgtaa gattgctgaa gatcttggtc tggtcaccgc
     3421 gaagaaaaaa gactctaccg gcatttgctt cattggcgaa cgtaaattcc gcgagttcct
     3481 gggccgttat ctcccggcgc aaccgggcaa aatcattacc gtcgatggcg atgaaattgg
     3541 tgagcaccag gggctgatgt atcacactct cggtcagcgt aaaggtctgg gtatcggtgg
     3601 caccaaagaa ggcaccgaag aaccgtggta tgtggtggac aaagacgtcg aaaacaacat
     3661 tctggttgtt gcgcagggcc atgaacaccc gcggctgatg tctgtcgggt tgattgccca
     3721 gcagttgcac tgggtcgatc gcgaaccatt caccggtact atgcgttgct cggtaaaaac
     3781 ccgctatcgc cagaccgata tcccttgcac cgtcaaggcg ctggacgatg atcgcattga
     3841 agtgattttc gatgaaccgg ttgccgccgt gacgccgggc cagtctgccg tcttctataa
     3901 cggtgaagtg tgcctcggtg gcggtattat tgagcagcgt ctgccgctgc cggtctgatt
     3961 attatcttta cttaaaacaa ggaagcagtg aacgtggcaa agaattacta tgacatcacc
     4021 ctcgccctgg ccggtatttg tcagtcggca cgcctggtgc aacaactcgc tcaccagggg
     4081 cattgtgatg ccgatgcgct acacgtctca ctcaacagta ttattgatat gaaccccagc
     4141 tcgacgctgg cggtttttgg cggtagcgaa gccaacctgc gcgtcgggct ggaaaccctg
     4201 ctcggcgtgc tcaatgccag cagtcgccag ggcttaaacg ccgaattaac ccgctacaca
     4261 ctcagcttga tggtgcttga gcgcaaactc tcctcagcga aaggcgcgct cgacactctg
     4321 ggcaaccgga tcaacggcct gcaacgccag ctcgaacact tcgatttaca gtccgaaacg
     4381 ctgatgagcg cgatggctgc tatctatgtt gatgtgatca gcccgcttgg cccgcgcatt
     4441 caggtcaccg gttcccctgc tgtactgcaa agcccacaag tgccggcgaa agttcgcgca
     4501 accctgctgg caggcattcg cgccgccgtg ctctggcacc aggtcggcgg cggacgtctg
     4561 caactgatgt tttctcgtaa tcgcctgacc actcaggcaa aacaaattct tgctcattta
     4621 accccggagt tgtgatctat ggaattatcc tcactgaccg ccgtttcccc tgtcgatgga
     4681 cgctacggcg ataaagtcag cgcgctgcgc gggattttca gcgaatatgg tttgctgaaa
     4741 ttccgtgtac aagttgaagt acgttggctg caaaaactgg ccgcgcacgc agcgatcaag
     4801 gaagttcctg cttttgctgc cgacgcaatc ggttaccttg atgcaattgt cgccaatttc
     4861 agcgaagaag atgccgcacg catcaaaacc atcgagcgta ccactaacca cgacgttaaa
     4921 gcggttgagt atttcctgaa agaaaaagtg gcggagatcc cggaactgca cgcggtttct
     4981 gaattcatcc actttgcctg tacttcggaa gatatcaata acctctccca cgcattaatg
     5041 ctgaaaaccg cgcgtgatga agtgatcctg ccgtactggc gtcaactgat tgatggaatt
     5101 aaagatctcg ccgttcagta ccgcgatatc ccgctgctgt ctcgtaccca cggtcagcca
     5161 gccacgccgt caaccatcgg taaagagatg gcaaacgtcg cctaccgtat ggagcgccag
     5221 taccgccagc ttaaccaggt ggagatcctc ggcaaaatca acggcgcggt cggtaactat
     5281 aacgcccaca tcgccgctta cccggaagtt gactggcatc agttcagcga agagttcgtc
     5341 acctcgctgg gtattcagtg gaacccgtac actacccaga ttgaaccgca cgactacatt
     5401 gccgaactgt ttgattgcgt tgcgcgcttc aacaccattc tgatcgactt tgaccgtgac
     5461 gtctggggtt atatcgccct taaccacttc aaacagaaaa ccattgctgg tgagattggt
     5521 tcttccacca tgccgcataa agttaacccg atcgacttcg agaactccga agggaatctg
     5581 ggcctttcca acgcggtatt acagcatctg gcaagcaaac tgccggtttc ccgctggcag
     5641 cgtgacctga ccgactccac cgtgctgcgt aacctcggcg tgggtatcgg ttatgcgctg
     5701 attgcgtatc aatccaccct gaaaggcgtg agcaaactgg aagtgaaccg tgaccatctg
     5761 ctggatgagc tggatcacaa ctgggaagtg ctggctgagc caatccagac agttatgcgt
     5821 cgctatggca tcgaaaaacc gtacgagaag ctgaaagagc tgactcgtgg taagcgcgtt
     5881 gacgccgaag gcatgaagca gtttatcgac ggtctggcgt tgccagaaga agagaaagcc
     5941 cgcctgaaag cgatgacgcc ggcaaactac attggtcgcg ccatcaccat ggttgatgag
     6001 ctgaaataaa ctcgtatcag tgccggatgg cgatgctgtc cggcctgctt attaagatta
     6061 tccgcttttt attttttcac tttacctccc ctccccgctg gtttatttaa tgtttacccc
     6121 cataaccaca taatcgcgtt acactatttt aataattaag acagggagaa ataaaaatgc
     6181 gcgtactggt tgttgaagac aatgcgttgt tacgtcacca ccttaaagtt cagattcagg
     6241 atgctggtca tcaggtcgat gatgcagaag atgccaaaga agccgattat tatctcaatg
     6301 aacatttacc ggatattgcg attgtcgatc tcggattgcc agacgaggac ggtctgtcac
     6361 tgattcgccg ctggcgtagc aatgatgttt cactgccgat tctggtatta accgcccgtg
     6421 aaagctggca ggacaaagtc gaagtattaa gtgctggtgc tgatgattac gtgactaaac
     6481 catttcatat tgaagaggtg atggcgcgaa tgcaggcatt aatgcggcgt aatagcggtc
     6541 tggcttcaca ggtcatttcg ctaccaccgt ttcaggttga tctctctcgc cgtgaattat
     6601 ctattaatga cgaagtgatc aaactgaccg cgttcgaata caccattatg gaaacgttga
     6661 tacgcaataa tggcaaagtg gtgagcaaag attcgttaat gctccaactc tatccggatg
     6721 cggagctgcg ggaaagccat accattgatg tactgatggg acgtctgcgc aaaaaaattc
     6781 aggcacaata tccgcaagaa gtgattacta ccgttcgcgg ccagggctat ttgttcgaat
     6841 tgcgctgatg aaaaaattac tgcgtctttt tttcccgctc tcgctgcggg tacgttttct
     6901 gttggcaacg gctgcggtag tactggtgct ttcgcttgcc tacggaatgg tcgcgctgat
     6961 cggttatagc gtcagtttcg ataaaactac gtttcggctg ttacgtggcg agagcaatct
     7021 gttctatacc cttgcgaagt gggaaaacaa taagttgcat gtcgagttac ccgaaaatat
     7081 cgacaagcaa agccccacca tgacgctaat ttatgatgag aacgggcagc ttttatgggc
     7141 gcaacgtgac gtgccctggc tgatgaagat gatccagcct gactggctga aatcgaatgg
     7201 ttttcatgaa attgaagcgg atgttaacga taccagcctc ttgctgagtg gagatcattc
     7261 gatacagcaa cagttgcagg aagtgcgaga agatgatgac gacgcggaga tgacccactc
     7321 ggtggcagta aacgtctacc cggcaacatc gcggatgcca aaattaacca ttgtggtggt
     7381 ggataccatt ccggtggagc taaaaagttc ctatatggtc tggagctggt ttatctatgt
     7441 gctctcagcc aatctgctgt tagtgatccc gctgctgtgg gtcgccgcct ggtggagttt
     7501 acgccccatc gaagccctgg caaaagaagt ccgcgaactg gaagaacata accgcgaatt
     7561 gctcaatcca gccacaacgc gagaactgac cagtctggta cgaaacctga accgattgtt
     7621 aaaaagtgaa cgcgaacgtt acgacaaata ccgtacgacg ctcaccgacc tgacccatag
     7681 tctgaaaacg ccactggcgg tgctgcaaag tacgctgcgt tctctgcgta gtgaaaagat
     7741 gagcgtcagt gatgctgagc cggtaatgct ggagcaaatc agccgcattt cacagcaaat
     7801 tggctactac ctgcatcgtg ccagtatgcg cggcgggaca ttgctcagcc gcgagctgca
     7861 tccggtcgcc ccactgctgg acaatctcac ctcagcgctg aacaaagtgt atcaacgcaa
     7921 aggggtcaat atctctctcg atatttcgcc agagatcagc tttgtcggtg agcagaacga
     7981 ttttgtcgag gtgatgggca acgtgctgga taatgcctgt aaatattgcc tcgagtttgt
     8041 cgaaatttct gcaaggcaaa ccgacgagca tctctatatt gtggtcgagg atgatggccc
     8101 cggtattcca ttaagcaagc gagaggtcat tttcgaccgt ggtcaacggg ttgatacttt
     8161 acgccctggg caaggtgtag ggctggcggt agcccgcgaa atcaccgagc aatatgaggg
     8221 taaaatcgtc gccggagaga gcatgctggg cggtgcgcgg atggaggtga tttttggtcg
     8281 ccagcattct gcgccgaaag atgaataaat atgtccatac ttcacgcatt acgttaagca
     8341 tccgttataa tcggttgcag ataccagcct gtggatgctt aacatggaat accaactcac
     8401 tcttaactgg cccgattttc ttgaacgtca ctggcagaaa cgcccggtgg tgttaaaacg
     8461 cggctttaat aattttattg acccgatctc tccagacgag ttggcgggtc tggcgatgga
     8521 aagcgaagtt gacagtcgac tggtcagtca ccaggatggc aaatggcagg tcagccacgg
     8581 cccgttcgaa agctacgatc atctcggtga aaccaactgg tcattactgg tacaggcagt
     8641 gaaccactgg catgagccga ccgccgcgct gatgcgaccg ttccgtgaac taccggactg
     8701 gcgtattgat gatctgatga tttctttttc tgtacctggc ggcggcgtcg gcccgcatct
     8761 cgatcagtac gacgtgttta tcattcaggg taccggacgt cgtcgctggc gagtgggcga
     8821 aaagctgcaa atgaaacagc actgcccaca tccggatctg ttacaggtcg atccgttcga
     8881 agccatcatc gatgaagagc tggagcctgg tgatattctt tatattccgc caggattccc
     8941 gcatgaaggc tacgcgctgg aaaatgcgat gaactattcc gtgggctttc gcgcgccaaa
     9001 tacgcgggaa ctgattagtg gatttgccga ttatgtgctg caacgtgaac tgggcggcaa
     9061 ctactacagc gatcctgatg ttccacctcg cgctcatcct gcggatgttc tgcctcaaga
     9121 gatggataaa ctgcgtgaga tgatgctcga attgatcaac cagccggaac actttaagca
     9181 atggtttggc gagtttatat cccagtcacg tcatgaactg gatatcgcgc cgccggaacc
     9241 gccttatcag ccagatgaaa tctacgatgc gctgaaacaa ggtgatgtgc tggtgcgcct
     9301 gggtggtctg cgcgtattgc gcattggcga cgacgtgtat gccaatggtg agaagatcga
     9361 ttccccgcac cgtccggcac tggatgcact cgccagcaac attgcgctga ctgcggagaa
     9421 ttttggcgat gcgctggaag atccgtcatt cctcgcgatg ctcgcggcgc tggtcaatag
     9481 cgggtattgg ttcttcgaag ggtaagtttg gatttaagcc ggatgcggca tcacatgccg
     9541 catccctttt cgcttacttc cgttgcgccg ttaactcggc aatacggacg atcacctgca
     9601 ccgctttttc cataccttcc agagtcacaa actcatgctt accatgatag ttgtaaccgc
     9661 cagtgaacaa gttcgggcac ggtaatccca taaacgacaa ctgcgcgccg tcggtaccgc
     9721 cgcggatcgg tttcagttcc ggttcaatat cgcagtcacg cattgcctgc tgggcgatat
     9781 cgagaatatg cggatgctca accactttct cgcgcatatt gtagtaactg tcttcaatca
     9841 ccagttcaat gtagcaatca ggatgtaacc ctttgcccac ttttttggcg atctccatca
     9901 ttttacattt acgcgcttca aactgtttac ggtcgaaatc acggatgatg tagtgcatat
     9961 cggcccgttc aacggtgcct ttcatgcccg ccaggtgata gaaaccttca tagccttctg
    10021 tcatttccgg gctttcatcc gccggaactt ccgcatgaat acgtgccgcc agcgacagcg
    10081 catttaccat cactcctttc gccgtgcccg gatgaacatt gttaccgaca attttgatat
    10141 tgaccgatgc ggcgttgaag ttttcaaact ccagttcgcc tacgccacca ccgtcaacag
    10201 tgtaagccca gcgggcatcg aaggcatcaa catcaaaatg tttcgcccct ttgcccactt
    10261 cttcatccgg ggtaaaggcg acgcgaatat caccatgcgg aatgtttttc tgttgcaata
    10321 ccgccagcgc ggtcatgatt tctgcaatac ctgctttgtc atcggcacct aacaaggttt
    10381 taccatcggt ggtaatcaat gtctgaccca gtagctgatg cagcaccggg aacataaccg
    10441 gtgataaaac ttcatcgccg atacccagcg caatatcgcc accgcgatag ttttcaacaa
    10501 tttgcggatt aacatttttg ccgctgcaat ccggtgaggt atccacatga gaaataaagc
    10561 caatcgccgg gatatcgcca gggacgttag ccggtaacgt cgccatcaaa gtgcccttct
    10621 cacttaaggt cacattgata agccccattt cttcgagctg ctctttcagc agatgcaata
    10681 acttccattg gccttccgtg ctgggaacct gtctcacccc tgcttttgat tgggtatcca
    10741 gagacacgta gttcaaaaat cgctcaagta gtttatccat gtagtcaccc tcactttttg
    10801 tgacaacatt attaagaagc aagaaaagac aaatattgcg tcaggtcact tttacccctg
    10861 caagcgggaa tatttatcag cattacctta atgaatataa ag
//
LOCUS       DAJVUK010000143        10899 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.143, whole genome shotgun sequence.
ACCESSION   DAJVUK010000143 DAJVUK010000000
VERSION     DAJVUK010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10899
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.143"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(228..2087)
                     /gene="gss"
                     /locus_tag="OQQ57_003387"
     CDS             complement(228..2087)
                     /gene="gss"
                     /locus_tag="OQQ57_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HCS1958026.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
     gene            2292..3158
                     /gene="yghU"
                     /locus_tag="OQQ57_003388"
     CDS             2292..3158
                     /gene="yghU"
                     /locus_tag="OQQ57_003388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HCS1958027.1"
                     /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPICVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
     gene            complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="OQQ57_003389"
     CDS             complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="OQQ57_003389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HCS1958028.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="OQQ57_003390"
     CDS             complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="OQQ57_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HCS1958029.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="OQQ57_003391"
     CDS             complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="OQQ57_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HCS1958030.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(4357..4851)
                     /locus_tag="OQQ57_003392"
     CDS             complement(4357..4851)
                     /locus_tag="OQQ57_003392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HCS1958031.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="OQQ57_003393"
     CDS             complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="OQQ57_003393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HCS1958032.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="OQQ57_003394"
     CDS             complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="OQQ57_003394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HCS1958033.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTREELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="OQQ57_003395"
     CDS             complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="OQQ57_003395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HCS1958034.1"
                     /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="OQQ57_003396"
     CDS             complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="OQQ57_003396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HCS1958035.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(10015..10302)
                     /locus_tag="OQQ57_003397"
     CDS             complement(10015..10302)
                     /locus_tag="OQQ57_003397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HCS1958036.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(10421..10899)
                     /locus_tag="OQQ57_003398"
                     /pseudo
     CDS             complement(10421..10899)
                     /locus_tag="OQQ57_003398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
BASE COUNT         2661 a         2989 c         2692 g         2557 t
ORIGIN      
        1 caaagtgaaa tatcattttt taacgataaa aagagtgtta tttcttgtgt atcagacaat
       61 aagcattcat tcaaaacctt tagaaataat caaaacacag gtattccact ggttaatata
      121 ttcacatatg aaatgaataa atattagaac atataaatat tgaatatttt gattaatccc
      181 cgtactgatt attcttcata atcagtacgg ggttgctaca acatgtatta ctttttcacc
      241 acaattaacg gttcaatatc actctctttt ttgatgacca gtgattcatc accgcgcaaa
      301 cacgtcccac cgtagttgcc gcccacggtg aaggtacata cctgaatgta tttaccgtcc
      361 actttcggca aacaccacag ttgctgatag atgtttttct gctcggcaaa tttaccgctg
      421 gttttgtcca gcacctcttc atgatggctg accaggtcga tattgctacc acagcgaccg
      481 gcaatcggtt tcactgcgta acctgttttc accaattcat cattaacagt gaaatcggta
      541 tccagcaggt aacgatggtg cgggaacagc gaccagagga tcggcagaat cgctttgttg
      601 ccggggatca ccgtccacag cggctcaaag actagcactt ccgggcgcag caatacgtcg
      661 ataagacgca cttcgttttg cggatgaccg gtacggattg gcaccgcagc aaactcacgg
      721 tcgctaactt cacgaatctg atcaaacgcg gtttcccacg cccaggtttt ccacacgcag
      781 ttaaccagtc gcccttcccc atcaatcagt tgcccggcag catcccagcc cagttcatcc
      841 aatccacgca agatacgcgt ttcaaagccc gcctggtgca gcgcctgctc cataaactgc
      901 gcgtgatagt tttcctcgat atctttgtcc tgcatgatat ggacaaacgg acgtgcacga
      961 ctgtgtttcc aggcaccagc caattcgtta atcagccctt ccgccggatt gaagccgttg
     1021 cctttatagc cctgctccgc ccaacgttcg aggatcaagc ccgcttcggt atgacaggag
     1081 gcggagtcgg cgttgtactc gtaaaccttc aggccacgct catccatgca gaaatccata
     1141 cgaccagtga tcatatggtg acggcgacgc tgccaggaga gacgcaaacg tggccagagg
     1201 attttcggaa tgtcgaacag cgccagcagg ttgtcatctt tcagtacctt gtcggttgcg
     1261 tgaagataca tcaggtgcag ctcgttggtg gctttaatta gctcctgctc ggcactctcg
     1321 gtaatggtgt agtaatgata aggatcctga ttgatcacct gaccgttggc ctgcacatag
     1381 gcgttttgca gcggatcttt ttcatccagc catttaccgt caaactggcc tttgttttcc
     1441 aggcgcgctc cgctgatttt cagcagctcg cctgcaattt ccggctgcgg taagctgtat
     1501 tcagtatctt ccgtctggat catccagccc agaatggtgg tgtcatcaaa agtgtctttc
     1561 agggtatagc agccgttttc gaccaccatc tccagctcac gcgtccactg ttgcccttgc
     1621 ggcaacgggg aatgaatcac gttctgttcc gcaatacgga ctttgttgcc atgcaattgg
     1681 gtaatgatgg cgacatggcc agtgtcttta aattcaccgc ctttatccca gataagaagc
     1741 gcacccgcga ccggcgcacg cggcgagccg ttaggaaatg cctgcaatgg caggatgttg
     1801 tcattaacca cttctcgcag gaagcgcagc gagaaaatct cccacgccat acccacgtca
     1861 gtaaagacca caccgtaatt cagaaagaga aaacggcgag caaattcaac gcattgccac
     1921 ttgtggccca tatattcgtc gtcgatatag ctacggaata cggcgtcatc ttcgtattcc
     1981 tgcggatcga gagaactgta atctgaagag tagattgcta ccccacctgg ggcgtagccc
     2041 aataatgtcc cgaacggggc atcctggctg gtcgttcctt tgctcatcac tttaccttta
     2101 acaatacaac ctaagcagtt ggcgtaattg ttgtgctctg attacctgct cagcgacatt
     2161 aaccggacag aggtcagact aatcatacac ctcatcgcag cggctggcgc aaagggttaa
     2221 aaaattcaca ttctgtacag caagtgacct gccacactgc ttcaacacta ccactcagaa
     2281 ggcaactcac tatgacagac aatacttatc agcccgcgaa agtctggacg tgggataaat
     2341 ccgctggcgg cgcgttcgcc aatattaatc gcccggtttc tggtccgacg catgaaaaaa
     2401 cgctgcccgt tggcaaacac ccattgcaac tttattcgct gggaacgccg aacggtcaga
     2461 aagtaacgat tatgcttgag gagctgctgg cgctgggcgt tactggtgca gagtacgacg
     2521 cctggctgat tcgtattggc gatggcgatc aattctccag cggctttgtc gaagtgaacc
     2581 caaactcgaa gatcccggcg ctgcgcgatc atacgcataa tccgccgatc tgtgtgtttg
     2641 aatctggttc gatcctgctt tatctggcgg agaaatttgg ctacttcctg ccgcaggatt
     2701 tggcaaagcg tactgaaacg atgaactggc tgttctggtt acagggcgcg gcaccgttcc
     2761 tcggcggtgg ttttggtcac ttttaccatt acgcaccggt aaagattgag tacgccatca
     2821 accgctttac catggaagcc aaacgtctgc tcgacgtgct ggataagcaa ctggcgcagc
     2881 ataagtttgt tgcgggcgat gagtacacca ttgcggatat ggcgatttgg ccgtggtttg
     2941 gcaacgtggt gttaggtggt gtgtatgatg ccgctgagtt tcttgatgcg ggcagttata
     3001 agcatgtaca acgctgggcg aaagaagtag gcgaacgtcc ggcggtgaaa cgtgggcgta
     3061 ttgttaaccg caccaacgga ccgctgaatg agcagttgca tgagcgccat gacgccagtg
     3121 atttcgagac gaatacggaa gataagcgtc aggggtaagg gttggtgttc gtcgcagcaa
     3181 gccatccagg ccggataagg cgttcacgcc gcatccggca atcgtgcaca atgcctgatg
     3241 cgacgctgcc gcgtcttatc aggcctacga aagctaatca tcacgcgctg gtaatgtcgt
     3301 aatccatttg gcgcagtgcg tctaatgtgg ctttggcttc atcttcgtcg atgatgctca
     3361 tggcaaatcc gacgtgtacc agcacccact ggcccagtag atcggcaggg ttaccttcac
     3421 aaatcagggc gatattcacg tcgcgcttga taccacatac ttcaacctgc gcaagctggt
     3481 gaatatcttc accgacagcc agcacctggc ctggaacgcc aatacacatt attaactccg
     3541 gttattcaac ttcaatactt ttgacgatca gcgaatcgcc ggtatcgaca cgcaaccgct
     3601 cgccgtgaca gagcggacac tgcgcatcgt gctgatgaat ctccaccacc tggctgcaat
     3661 cccagcacca ggcctgggcg ggtttataga cgatatgtaa atcgcaccct tgagccaccg
     3721 ttccgtggca gacaatttca aaactaaaac ggacggcgct ctcctcaacg caggagagcg
     3781 cgccaatttc cagccacacg gcggtgacgc gcttaacatc gtgctgctcc gcctgccgtt
     3841 ggataatttc aacggcgctc tggcaaagcg acaactcatg cattttcgcc actcctgcga
     3901 ccaaacagca gggcgcgacg ccctgcgtgt ggtacatccg gattcgtgac tggcagcgaa
     3961 aggatcattc gtgcgcagtc atccgtcagg cgttggccct cttcaatcga catactgtgc
     4021 gaaagcggtg acatcagcga acaggagagg tattgcgaaa caccgtccag ttcgccaacg
     4081 gtaaaggtca tggtgccata cggcagttgc agaccaattt tttcactcac tttgcgcagc
     4141 ggccagagtt gatccgggcc ggggaagata actgcactca gcatccacgg ggtgatcaca
     4201 caccccgtcc actgaccttc gaacagcgta aaatcagaaa catacaccgg cattgaagga
     4261 tgcagaaaag agagatcgtg catcgaacgc cgggcaattt cttcaaacgc tgcctgtact
     4321 tgcgccttcg gggaggtctg gaaacctgct atctcttcag tcatgaatcg cctcccgtgg
     4381 gatggcttcc acgcctgatt cgcgcagcgc agccagaacc tgctcaagcg caggttcaat
     4441 cattgcttca accgtcggcg ttaagccgat gtgtggctcc agcgattccg ggatcacgcc
     4501 gaccagggtc agctttttcg gaaactcacc ggtgaagcgc agggccgaca atacgtcggc
     4561 caggccaagc tgatgcggag agattttgtt ggtaaacaac gccggaactt cttcatcccg
     4621 caggatcatc atcgttcccg gcgtgttctt tttcgacaca atggcatccg caataatcag
     4681 atgatcgcga tttgccatgt cgccaagcag ctccattccc gccgtgccgc catcgaggat
     4741 ctcaacataa tccggcagaa tgtatcgttg ctctaacgct tcgacaatcc gcacaccgat
     4801 ggcttcatcg gtcagcaaaa tattgccgac ccctaagact aaaatacgca ttacagaacc
     4861 ttcactgaaa ccacttcgtt gccgtcggca tccactacgt gtaccgcaca ggccatgcac
     4921 gggtcgaagg agtgaatggt acgcaccact tccagcggtt tattcggatc agcaaccggt
     4981 gtacccacca gcgactgctc gtaaggaccg acgtcatcat tgaagttacg cggaccagag
     5041 ttccaggttg atggaacaac tgcctggtag ttactgataa taccgtcttt aataaccatc
     5101 cagtgagaga gcataccgcg cggcgcttcg aggaagccaa cacctttgaa ctcacccgtt
     5161 gccggaatgt tcggtttcac aaaggtggtg tgatcgcctt tgccgatatt ggtgatcagt
     5221 gcactgtatt gattttgcag gatatcctgc aattcgcagc agtgaacggt acgaccaata
     5281 atacggccca gcgtggagtg cagctgcgcc acttccagcg tgttgccagt cagtttctga
     5341 taaatcgcaa cgatttcatt cagtttgttc tgggtagatt cgcgacctgc cgccagtttc
     5401 accagcatat tagccagcgg acccacttct accgttttgc cgtagaaagt cggtgatttc
     5461 acccaggaat atttcccgtc gtcagaccaa ccatcataag ccggaatggt ggtaccttcc
     5521 cacggtgcct gcggcgcttc gtctttatac caggagtgct tcgcgctttc ctgaatgcct
     5581 ttgatcaggt attcatcgga atgagaagtg atcggacgat acgaggacag atccgcattc
     5641 tcaatgtagc cgcccgggaa caggaagctg ccgtttttac tgtcggtcgg gaattccggc
     5701 acgctcaggt agttcaccgc acctttaccg cgcgtcagcc attccgggta gaacgcggca
     5761 ataactgcgg tatcaacctt ataaacctgt tcaacaaagt cgctcagctt gtcgatgaaa
     5821 gacttgatgt acatcaggcg ctcaaggttc agcacgccca aaccgtcgag gttgatcggg
     5881 ttcgcgacac cacctaccgc caggttctga atgtgcggcg ttttaccgcc cagcagcgcc
     5941 acgacgcggt tagcgtcacg ctggcactcc agcgcctgca ggtagtgcgc taccgcaatc
     6001 aggttcactt ccggcggcag tttcatcgcc gggtgacccc agtagccatt ggcgaaaata
     6061 cccaactgac cgctggcaac cagatctttg atcttgttct gaactttagt gaactcttcc
     6121 ggactgttca gatgccaggt cgaaacgcct ttcagcattt cggaggcttt ggttgggtca
     6181 gcttgcagtg cagaagtgat gtccacccag tccagcgccg aaagctgata gaaatgaacg
     6241 atatggtcat gcgtggtgtg cgcagccaga atgatgttac ggatgtattg cgcgttaacc
     6301 ggaacgtcga tattcagcgc actttctgcc gcacgaacgg aagacagcgc gtgagtggta
     6361 gtacatacgc cacagatacg ttgcacaatc atccatgcat cgcgcggatc gcggtttttc
     6421 acgatctctt ccatgccgcg ccacatggta ccggaagccc atgctttcga aacgacgcca
     6481 ttttcgattt cgcaatcgat gcgtaaatgc ccctcaatac gggttaccgg atcaatagta
     6541 attctctggc tcatgctttg ctcgcctcat gacgattatg atcgttttgt tttaaaggag
     6601 gaagtatcgg cagtagacga atgagtacga tgtaagcgca aatctcaata gccacaaaac
     6661 caatagaaat caacagttct tccctggtcg ggaagtaggc gtaaccgccg cccgggttga
     6721 atgccaccag cgaataggtc agacgccagg ttgcacaacc taacagtgcg ctcagtgctg
     6781 acaggaacag catgcgggaa tcattacgca gcttcgccac acgcagaacg accagcggga
     6841 agagcatcag caggacttca atccagaaca tcacggagta gaagtcaccg gcaaacgcta
     6901 acgacagctt gtcgcgatag ataagctcgc caaagcgcag cacgataaaa atcgccagca
     6961 acacactgat ggtgttggtc agcttgacga acagactctt ttcatccgga ccgttgccac
     7021 gcagacccgc ctgcaccagc gaaccttcaa agatgacaat cgagaagccc atgatgaacg
     7081 ccgtcagcag cgagaacagc ggcaacattt catagctctg ccacaacgga tgcaccttgt
     7141 agcccgccga gatcatcagt gaccccattg aagactggtg catggtcggc aacagcgcgc
     7201 caagtgcaat gatgaagaac atcaccttgt tcagacgctt gagagaaacc ttccagccca
     7261 gacgttcaaa cagtgccgga gcaaactcca gtgccatcac gccgatatag atggtcatac
     7321 agaccgccgt ctcgaacagt accgagttca cgttgaagtg acccggaatg tagaagtacg
     7381 gcaggttcca gtagcgaccc acgtcgatag tgatcgacaa gccacccagt gagtaaccaa
     7441 acagactcgc caacagcgcc ggacgcacca gcggatggta ttgcccacgg ttaaagacgt
     7501 ataccgccca cgccagcgcc cagccgccac aggcaaagcc ggtaccaatc agcaggtcaa
     7561 acgcgatcca cacgccccac gggaagccgc cgttcaggtc agagacagag cccagaccga
     7621 acaccagacg cttcacaatc aggagcatac agatgacgat taacggtcca aaaatcatga
     7681 ccggtttact gatgattttg ccgcccagcg gttgtggatc atgactcatg atcgtctcct
     7741 ccgtcgtgat ggtcgttttt ggtgttgcga cgaaccagca cggttaagcc cgccagcaca
     7801 gccagtggta gcatcatgcc tttatacagg gtgtgttgaa tattttcgga acgcgcaccg
     7861 gtagaaagat cgtccagttt cggcaggtcg agattttcat aaggcacacc cgtcagtacc
     7921 agaacctgag taccgccgcc ctctttctcg ccgtacagat gcggataata tttcggcacc
     7981 gtatgcaggt aagtgtcgcc agatttcagc gtctgacgcg gatagtggta ttcgctgcca
     8041 ggcttcagcg ccagacgttt tttcgcctcc gccatcagct cttcacgcgt accgaaaatc
     8101 accgcgcccg ccgggcacac ttctacgcag ccaggcagac cgcctttatc gagacgttcc
     8161 acacctttct ggttgcacag ctcgcactta tgcagcgcac caaacgggtt gttgtagtcg
     8221 tacttcggca cgttgtacgg acaggcgacc atgcagtaac ggcaaccggt gcacacgtct
     8281 ttgtcgtaat ggacaatgcc ggttttcgga tcttttttca gtgcagagac cgggcacaca
     8341 gagacacagt tcggatcgac gcagtgcata cactgtttct taatgtacgc gtagccgttc
     8401 tcctcctggt ctttgttgac ccctgtgccg ctggtccaca cctgaatgat gttattggta
     8461 tacggcgaca gtttgtcgtt gttcgaccag gtctgttccc cttgcgggtt acgttcaggg
     8521 aagttgatat cctgacactt ggtgacgcaa gcctggcagc ctacgcacaa ggtcgagtcg
     8581 tacaacatcc ccagcgatcc cggaattggc gggcggtttt cagcagccgc atgactgaca
     8641 gacggcagcg cgcccgtcag caatgccccg caggaggctg ctttaataaa attacgtctg
     8701 ttcacggtta ttctccccgt gagtcagcgt tatctttctt ttgctgacga cccagttcac
     8761 gcaccgccat cacgctgaca ccggcaacca gcccaaccac accgccgagc aaaccaatag
     8821 cgcctgcaga gacgttaccg ccctctttag cgttaacatc cggtttctgt gaacgcggag
     8881 tctgattttc gacgttggca agctgatgga tgcctttatg gaagccgata ccttcttcgt
     8941 tacagccata gcatgggtga ccaatcgcta ccggccacac gccgccaaca tcgcagaatt
     9001 gcagcgttga gcagttgccg taagtttctg gccctttaca gccgaggtgg tacaggcacc
     9061 agccttcacg gtggccttca tcaccgaact ctttggcaaa acgaccagca tcgaagtgcg
     9121 ggcgacgttc gcagtgttcg tgaatcagac ggccataggc gaaggtcgga cgatttttgt
     9181 catccagttt cggcggtttg ccgtaagtga tgatgtgcgc aacggtcgcg aggaagttgt
     9241 gcgggttcgg cgggcagccc ggaatattga taacggtttt gcctggcaga acttcttgca
     9301 ggctgactgc gccagttggg ttaactccag ctgcggcaac accgccccac gcagagcagg
     9361 aaccgatagc gataatcgct gctgcgcctt ctgccgcttt gcggatgtga tccacaatcg
     9421 gctcaccagc aaccatgcaa taaataccgt tatcttttaa tgggatggaa ccatccacaa
     9481 ccaacacata ctgccctttg tacttctcaa gtgcgttatg tttgttctct tcgacctgat
     9541 gaccgaaggc ggcggaaagc acttcgtgat actccagaga gatagtctcc agcacgaggt
     9601 tttctaccgt tggatgcgtt gcacgaagca gagattccgt acaaccggtg cactcctgcg
     9661 cgccaatcca gataactggc ggacgctgcg ggttagtaac cgattcggcc atctctgcag
     9721 cggctttgct acttaacccc atggtggcgg ctaatgctgc acaaagcttc atgaaatcac
     9781 gacggttaat gccgtgagaa tggatgaggg tgttatctcc agtcatttat agttattccg
     9841 ttgcgaagac ctggcatata ttttgcctca atcgcaaaat caataatgcg atcgatgcgc
     9901 catttaccac acatttatta tggttatcga tatcatgata ctgcggcggg gcgctaaaac
     9961 gaagggaaga agcattagtg taattaatta aagcaagata atacgtatgt ttgatcaatt
    10021 ttcgaggcga taaccggcca taaaaaagcg caacgtagaa caggaattat tctcacgaaa
    10081 gaaatccatt accatctctt tatccagtcc atagcggcgc gtcagaatac ccgcttccca
    10141 ggcgctaagc tggcgatctc cggtcttttc gtacatccgg tgtgagtagc ctaatacaaa
    10201 accgcgttta taatcggcac agaattttgt cacattaacc gcactgtcgg catgcgttgc
    10261 ttttaatccc gccattaagc ctttaccaaa atggttattc atcgttcacc tcattcgcta
    10321 tatattatca tatatagcaa tattttaggc aaagaacgac ttttgcgcac gctatttttt
    10381 catgcttgtt taagacgtaa tcccgtaaga gataaaccca tcaggagaga tatttatcga
    10441 accatttcag cgtcctttgc caggcaagat cggcggcaga tttgtcataa cgaggcgtgg
    10501 aatcattatg gaatccgtga ttaacccccg gatagatata cgcctcatag accttattat
    10561 tggctttcaa cgccgcctca taagcgggcc agccctcgtt gattcgggtg tccagttccg
    10621 cgaagtggag tagtaaaggc gcttcaatct tcgccacatc ggcagtgggt gcctgacgac
    10681 cataaaacgg caccgcgcag gccagttccg gatacgcgac agccgccgcg ttcgatacac
    10741 caccgccata gcaaaatccg gtaataccca cttatgcctg tcgcttgcgg atagcgttgc
    10801 ataaactcaa ttgcggcaaa gaaatcattc atcagtttgg ttggatcaac ctgctgttgc
    10861 agctcacgac ctttatcatc atttcccgga taacctcca
//
LOCUS       DAJVUK010000144        10871 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.144, whole genome shotgun sequence.
ACCESSION   DAJVUK010000144 DAJVUK010000000
VERSION     DAJVUK010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10871
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.144"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..132
                     /locus_tag="OQQ57_003399"
     CDS             <1..132
                     /locus_tag="OQQ57_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HCS1958037.1"
                     /translation="LDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQLIAN"
     gene            198..995
                     /locus_tag="OQQ57_003400"
     CDS             198..995
                     /locus_tag="OQQ57_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HCS1958038.1"
                     /translation="MEISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILG
                     DLKTGIILGGTLELIALGWMNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPV
                     AAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDILHVSAFGVQALRVAIPALIVSL
                     FVSADMVSNMLSAIPEFVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGG
                     YLDLSLLAFGGVGVIMALVYIQLNPQWRKAEPQLQATASTALDQLDD"
     gene            1006..1848
                     /locus_tag="OQQ57_003401"
     CDS             1006..1848
                     /locus_tag="OQQ57_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000437910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HCS1958039.1"
                     /translation="MEQRKITRSDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIK
                     RLYPLKEDQVAALRRHLVFFNTTPAVCGPVIGVTAAMEEARANGAEIDDGTINGIKVG
                     LMGPLAGVGDPLVWGTLRPITTALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQL
                     GFRKGVNIVSDMGGNVLQKLTEGASILGLFVMGVLVTKWTSINVPLVVSQTHAADGST
                     VTMTVQNILDQLCPGLLALGLTLLMVRLLNKKINPVWLIFALFGLGIIGNALGFLSRF
                     FAPA"
     gene            1882..3111
                     /gene="sorE"
                     /locus_tag="OQQ57_003402"
     CDS             1882..3111
                     /gene="sorE"
                     /locus_tag="OQQ57_003402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-sorbose 1-phosphate reductase"
                     /protein_id="HCS1958040.1"
                     /translation="MKTTALRLYGKRDLRLETFDLPEMQEDEILATVVTDSLCLSSWK
                     EANLGENHKKVPDDVATNPIIIGHEFCGDILAVGKKWQHKFQPGQRYVIQANLQLPDR
                     PDCPGYSFPWVGGEATHVVIPNEVMEQDCLLAYDGETYFEGSLVEPLSCVIGAFNANY
                     HLQEGSYNHTMGIRPQGRMLILGGTGPMGLLAIDYALHGPVNPSQLVITDTDNDKLSY
                     ARKHYPSEPQTLIHYLNAADAAFDTLMALSGGHGFDDIFVFVPNEGLVTLASSLLATD
                     GCLNFFAGPQDKHFSAPINFYDVHYAFTHYVGTSGGNTDDMRAAVKLIEEKKVQAAKV
                     VTHILGLNAAGETTLELPAVGGGKKLVYTGKYLPLTSLTQIQDQALAAILARHQGIWS
                     GEAEQYLLTHAEAISHD"
     gene            3494..4183
                     /gene="pepE"
                     /locus_tag="OQQ57_003403"
     CDS             3494..4183
                     /gene="pepE"
                     /locus_tag="OQQ57_003403"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HCS1958041.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
     gene            complement(4274..5905)
                     /locus_tag="OQQ57_003404"
     CDS             complement(4274..5905)
                     /locus_tag="OQQ57_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HCS1958042.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTAALTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQSDEDEGRDEY"
     gene            complement(6125..9808)
                     /gene="metH"
                     /locus_tag="OQQ57_003405"
     CDS             complement(6125..9808)
                     /gene="metH"
                     /locus_tag="OQQ57_003405"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HCS1958043.1"
                     /translation="MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFAD
                     WPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAE
                     INFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDQLV
                     AAYCESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG
                     LPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLP
                     EIPVACRLSGLEPLNIGDDSLFVNVGERTNVTGSAKFKRLIKEEKYSEAQDVARQQVE
                     NGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQG
                     KGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKIL
                     TEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVS
                     FSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRR
                     DDGTERLLELAEKYRGSKTDDTDNAQQAEWRSWEVNKRLEYSLVKGITEFIEQDTEEA
                     RQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASK
                     EQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNA
                     DLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVY
                     VQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVTLEAARDNDF
                     AFDWQAYTPPVAHRLGVQEVEASIETLRNCIDWTPFFMTWSLAGKYPRILEDEVVGVE
                     AQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLR
                     QQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMV
                     KALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHT
                     EKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYA
                     RRKGMSVSDVERWLAPNLGYDAD"
     gene            10008..10832
                     /gene="iclR"
                     /locus_tag="OQQ57_003406"
     CDS             10008..10832
                     /gene="iclR"
                     /locus_tag="OQQ57_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418442.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HCS1958044.1"
                     /translation="MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLL
                     AIVHPILRNLMEESGETVNMEVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASG
                     AGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHAL
                     GLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR"
BASE COUNT         2464 a         2977 c         2871 g         2559 t
ORIGIN      
        1 ttagatgatg atgatattaa cgcatttcat gagttaaata atcttggcgt catactggat
       61 ttacgcgtcg tagcgtcaga tccctcaatc aatattatcg acaaaataaa cgaacagtta
      121 atcgcaaatt aaataatagc gcttgtgtac atatgcttta acaggcaggg atgacgacac
      181 ttaaaaggtg aaaaatcatg gaaataagta ccctacaaat cattgctata tttctttttt
      241 cctgtattgc cggaatgggc agcgtgctgg atgaatttca gactcatcgc ccgttaattg
      301 cctgtacggt gattggttta attctcggtg atttaaaaac cggaataata ctcggtggta
      361 cgctggaatt gatagctctc ggctggatga acgtcggcgc ggcgcaatct ccggattctg
      421 cactcgccag cataatctcc gccattctgg ttatcgttgg tcagcaaagc atcgccaccg
      481 gaatcgccat cgcgttgcct gtggctgcgg caggccaggt gctgactgtg tttgcccgta
      541 ccatcaccgt agtgttccag cacgcggcgg ataaagcagc ggaagaagca cggtttcgca
      601 ctctcgatat tctgcatgtc tccgcgtttg gcgtgcaggc gctgcgcgtt gctattccgg
      661 cactgattgt ctcactgttc gtcagcgccg atatggtgag caatatgctg agcgcgatac
      721 cggaattcgt gacgcgcggt ctgcaaattg ctggcggttt tatcgtggtg gtcggttacg
      781 ccatggtgct acgtatgatg ggcgtgaaat atttgatgcc tttctttttc ctcggtttcc
      841 tcgcaggtgg ctacctcgat ctcagtctgc tggcgttcgg tggcgtcggc gtgatcatgg
      901 ccctggtcta catccagcta aatccacagt ggcgtaaagc tgaacctcaa ctccaggcca
      961 ccgcctccac cgcccttgac caacttgacg attaacggag ccatcatgga acagagaaaa
     1021 attacacgca gcgatctggt gagcatgttt ctgcgctcca acctgcaaca ggcgtccttt
     1081 aactttgaac gtattcacgg gctgggtttt tgctacgaca tgatccccgc catcaaacga
     1141 ctttacccat taaaagagga tcaggttgcg gcgctcaggc gacacctggt gttcttcaat
     1201 accacgccag ccgtatgtgg cccggtcatc ggcgtcactg ccgccatgga agaggcgcgg
     1261 gccaacggcg cggaaattga tgacggtacc attaacggca tcaaagtcgg tctgatggga
     1321 ccattggcag gagttggcga tccactggtc tggggaacgc tgcgcccgat taccaccgcg
     1381 ctcggcgcat ctctggcact ttcgggcaac attctcggcc cgctgctgtt cttctttatt
     1441 ttcaatgcgg tgcgtctggc gatgaagtgg tatggcctac agctcggctt tcgcaaaggg
     1501 gtgaatatcg tcagcgatat gggcgggaat gtgctgcaaa aactcaccga aggcgcgtcg
     1561 attctcggac tgtttgtgat gggcgtgctg gtcaccaaat ggacgtcaat caacgtaccg
     1621 ttggtggttt cacaaacgca tgccgccgat ggctccaccg tcaccatgac cgtgcagaac
     1681 attctcgacc aactttgccc tggtttgctg gcgctcggtc tgacgctgct tatggttcgt
     1741 ctgctcaaca aaaaaattaa cccggtatgg ctgattttcg ccctgtttgg cttagggatt
     1801 atcggtaatg cgctgggctt cctgtccaga ttcttcgccc cggcatgact gccggggcca
     1861 tcgctcaaca tgaggtggtt tatgaaaaca acagctctgc gtctttatgg taaacgtgat
     1921 ttacgcctgg aaacctttga ccttcctgaa atgcaggagg atgaaatcct cgcgacggtg
     1981 gtcactgaca gcctgtgcct ctcttcctgg aaagaggcca atctgggtga aaaccataaa
     2041 aaagtacccg acgatgtggc gaccaacccc atcatcatcg gccacgagtt ttgcggcgat
     2101 attctggccg tgggtaaaaa gtggcagcac aaattccagc cgggtcagcg ttatgtgatt
     2161 caggccaacc tgcaactccc cgaccgcccg gactgccccg gctactcctt cccgtgggtg
     2221 ggcggcgaag ccacgcatgt agttattccc aacgaggtca tggaacaaga ttgcctgctg
     2281 gcatacgacg gcgaaaccta ttttgaaggc tcactggttg aaccgctttc ctgcgtgatt
     2341 ggcgcgttca acgccaacta tcatcttcag gaaggtagtt ataaccacac gatggggatt
     2401 cgcccgcaag ggcgcatgct gatcctcggc ggcaccggac caatgggact gttggcgatt
     2461 gattatgcgc tacatggacc cgttaacccg tcgcagctcg tcattaccga taccgacaac
     2521 gataaattga gttatgcgcg caagcactat ccatcagaac cgcaaacact gattcattat
     2581 ctcaatgccg ccgatgcagc atttgatacg ctaatggcgc tgagtggcgg tcacggcttc
     2641 gatgatattt tcgtctttgt gcctaatgaa ggactggtga ctctcgcctc ttccttgctg
     2701 gcgacagatg gttgcctgaa tttcttcgcc ggaccgcagg ataaacattt cagcgcgcca
     2761 attaatttct acgatgtgca ttatgcattt acccactacg tgggcacgtc aggcggcaat
     2821 accgacgaca tgcgcgcggc ggtcaaactg attgaagaga aaaaagtgca ggccgcaaaa
     2881 gtggtaacac atattcttgg gctgaatgcc gcgggcgaaa ccacgcttga attgcctgcc
     2941 gtcggcggcg gcaaaaagct ggtgtatacc gggaaatacc tgccgctgac gtcactcacg
     3001 cagattcagg atcaagcact ggcggcgatt ctggcgcgtc atcaggggat ctggtccggt
     3061 gaggcggagc aatatctgct cactcatgca gaggcaattt cccatgatta atcgcgctac
     3121 ttaactctgc atgtcgctgg ctggtcgccg cggcaacttc gcgacctgat gtgcggctga
     3181 ttgctgaagc ggcccaatgt gcacgagaag gataaaaaaa catcagcgcc ttaaggggcg
     3241 ctcaaattgg tggcaaagta cacattgttt atgccggatg cggaataaag ccttattcgg
     3301 cctacataat ctcgaaaatt caatatattg cagttatctg gtaggcctgg taagcgtagc
     3361 gcatcaggca atgctgtgtt tgtcatcagt ctcagctccc ggtgcaatac gtgacatcgt
     3421 gagccatgtc agtaagtggt taaattcgca gtggtagcat gccttccgtg atttcttact
     3481 aaccggagaa gtaatggaac tgcttttatt gagtaactcg acgctgccgg gtaaagcctg
     3541 gctggaacat gcactgccgc taattgctga acagttgcag ggtcgccgct cagcggtgtt
     3601 tatccctttc gctggcgtaa cgcagacctg ggatgattac acagcgaaaa cggctgcggt
     3661 tctcgctccg ctgggtgttt ctgtcaccgg tattcatagc gttgtcgatc ccgttgccgc
     3721 gattgaaaat gctgagatcg tgattgtcgg cggcgggaat actttccagt tgctgaaaca
     3781 gtgccgcgag cgcgggctgc tggcaccaat tactgacgtg gttaaacgtg gtgcgctgta
     3841 tattggctgg agcgcaggcg ctaaccttgc ttgcccaacc attcgtacca ccaacgatat
     3901 gccgattgtc gatccgcaag gtttcgatgc gctaaatctg ttcccgttgc aaatcaaccc
     3961 gcacttcacc aacgcgctgc cggaaggcca taaaggtgaa acccgtgagc agcgtattcg
     4021 cgaactgctg gtcgtcgcgc cagaactgac gattattggt ctaccggaag gtaactggat
     4081 cacagtgagt aaaggtcacg ctacgctggg tggcccgaac accacctatg tgtttaaggc
     4141 cggtgaagaa gcggttccgc tggaagctgg tcaccgtttt taagtgaatt gccggatgca
     4201 tgatccggca tcttgttcat agtgcctgat gcgacgcttg acgcgtctta tcaggcctac
     4261 aggattcaca atattaatac tcgtcccgtc cttcatcttc atccgactgt tccagcacac
     4321 tgtaagccac cgaacaaaac agcgagttca ggcgctgcat atctcccagt aagcctaaat
     4381 gtagcgaact ggtttcaatg ctctgcacgt tttgctgatg caggcgatcg acgtgggcgt
     4441 gggaatagcg gcgattaaga atgcgaaagc gatgcttact acggcgcaaa cgacgagcgc
     4501 tggtgacatc gccagagaag aacaccgaca ttgccagctt taaattactg agcaattgct
     4561 catagagcgc atccagttcc ttcaacccat caagcgaaaa tgcccgccgt gctgccagtg
     4621 atttgtcagc aatttcgctg cccatgcgct cgacgatatc ggaggcctgt tcaaggttga
     4681 gcgacatttc aataatctcc gcccagcggc gcgactcttc ctccgccagc tcttcttttg
     4741 gcatccgcgc cagatacagc ttaatggcgg tgtagagaac gttgatatca tctgccagct
     4801 tacgcagctc tttctcctgc cgtggctcac cgtgcatcac tttattcaac ccttccatca
     4861 tctgttccat ggcgtcgcca atgcgcaggg tttcgcgcgc ggcgttcgcc agagcaagcg
     4921 tgggcgtatc cagcgcgctg acatccagat gtttaggccg tagctgggta tccagttccg
     4981 gttcatcgcg aataatcgtt ttgcaaaacc gtgccatcgg gtcaacaaat ggcagcatga
     5041 ccaggcaacg tacaaggttg tagaagacgt ggaaatagat caccagttcc gcttttggca
     5101 atgacagctt ccccattgtc tctgccagca aatggacaaa cggcaggata atcaggctac
     5161 ccaccagctt aaacagcaga ctacccagcg cgacacggcg ggctgcggca ttggcggcac
     5221 tgttgttgag catcgccagc aggccggaac cgaggttagc accaatcacc agacagagcg
     5281 ccacggggaa ggagataatg cctgcggcgg tcagagccgc ggtcagcagt acagcagcaa
     5341 ggctggagta gctgataatg gcgaacatcg cgccaatcag cgcatccagc agaatatcgc
     5401 cggtcagcga ggcaaagatc acctgaacgc cgtttgcctg ggtgatcggc gttacggcct
     5461 gcacaatcaa ctccagcgcc agcaaaatca gcccaagacc aataccgacg cggcccagtt
     5521 gcccggcgcg tgactgtttg cgtccgagga aaaaaatcac gccgataaaa ataagtaacg
     5581 gtgacagcca ggataagtcg aaggtgagaa tacgcgccat tagcgccgtc ccgacatctg
     5641 cccccagcac aatgaccaga gccggtgcga gggctaccag atcctgagcg acgaacgagg
     5701 tcaccagcat ggtggtggca ttactgctct gtaccagtgc ggtaacgccg atccccgcgc
     5761 aaaaggcgag cggctttttt tcgacgctcc ggctaaggac agtacgcaaa cgcgcgccga
     5821 agacgcgcat tacgccggtt cgaacaatat gagtccccca gaccagcagg gcgacggcag
     5881 aaagcaggtg aagcagcgtt aacacgagtt caggttctcc ttatcgttat atgttcctga
     5941 agcaattgaa tgaccaaagg accggaaaca cgctgactgg catctttact gtgccttttg
     6001 acattcgttt ttccggctaa gattattcca gcctgattcc agtataagtg tttcatatta
     6061 ataaagagac agggcactca ttgagcgccc tgtttgttgt aaggaaaagt gacagatttg
     6121 tgaatcagtc cgcgtcatac cccagattcg gtgccagcca gcgctcaaca tctgagacgc
     6181 tcataccttt acggcgggca tagtcttcaa cctgatcgcg ctgaatttgc gccacggcgt
     6241 agtacttgct gtccgggtgg ctgaaatacc aacccgaaac cgatgcaccg ggccacatgg
     6301 cgaaagattc tgtgagtttc atgccggtat gtttttccac ttccagcagc tcccagatgg
     6361 tggctttttc cgtatgttcc gggcaggccg ggtagcccgg tgccggacgg atgccctggt
     6421 agttttcgcg gatcagttct tcgttgctga ggttctcgtt cggcgcatag ccccagtaga
     6481 ctttacgcac acgctcatgg agatactccg caaaggcttc ggctaaacgg tcggcaagcg
     6541 ctttcaccat gattttgttg taatcatcgt gctgcgcttc aaaggcatca gccagtgcgt
     6601 cctcttccag cccgccagtc acggcaaatg cgccgatgta atctgcttta ccagaaagct
     6661 tcggcgcaac aaagtcagcg agacagtagt tagcgaatcc cgttttttcg gtctgttgac
     6721 gcagatggtg gctgacattg atcacatggg tgcgcgtttc gtcacggtag atttcaatgt
     6781 catcgcccac acggtttgcc gggaacaggc ccaccacgcc acgcggattc agcgttttct
     6841 cggcgcttaa tttatccagc atgtcgttgg cgtctttaaa cagccgctgc gcctcaacgc
     6901 ccaccacttc atcttccaga atgcgcggat acttcccggc cagcgaccag gtcataaaga
     6961 acggtgtcca gtcgatgcaa ttacgcagag tttcgatgct ggcttcaact tcctgcacgc
     7021 cgagacggtg cgccaccggc ggcgtgtaag cctgccagtc aaaagcgaag tcgttatcgc
     7081 gcgccgcttc cagcgtgacc ggtggtgtgc gcggtttctt gcgcccgtgc tgaatacgta
     7141 cggtttcgta ctccttgcgg gtacgagcga caaaatcatc gcgctgagta tcggaaagca
     7201 gcgccgccac cacaccaacg gtgcgcgagg cattctgcac atacaccgtc gggccgctgt
     7261 agttctgctc aattttcacc gccgtgtgcg cttttgaggt ggtcgcgcca ccgatcagta
     7321 acggaatggt gaagccctga cgctccatct ctttcgccac gttaaccatc tcgtccagcg
     7381 acggcgtgat aagccccgaa aggccaatca aatcagcatt cacttcttta gcagtacgga
     7441 gaattttttc cgcaggcacc atcacgccga gatcgacaat ttcgtagttg ttacattgca
     7501 gcaccacgcc aacgatattt ttaccgatat cgtggacgtc gcccttcacg gtggcgatca
     7561 ccatcttgcc gttggttttg ccctgctctt tgctggcttc aataaacggt tcgagatacg
     7621 ccaccgcctg tttcatgacg cgcgccgatt tgaccacctg tggcaggaac attttgcctt
     7681 cgccaaacag atcgccgacc acgttcatgc cgtccatcaa cgggccttca atcacttcaa
     7741 tcgggcgcgt agcctgctgg cgggcttctt cggtatcctg ctcgataaac tcggtaatgc
     7801 ctttgaccag cgagtattcc agacgtttat tcacttccca cgagcgccac tccgcctgct
     7861 gggcgttatc ggtgtcgtcg gttttgctgc cgcgatattt ctcggcaagc tccagtaaac
     7921 gctcagtgcc atcgtcacga cgattaagaa tcacatcttc caccgcgtcg cgcagttcag
     7981 cgggtaggtc gtcgtaaatc gccagttgcc ccgcgttgac gatccccata tccatgccat
     8041 tgcgaatagc gtagtagagg aacactgcgt gaatggcttc gcgcaccgga tcgttgccac
     8101 ggaatgagaa agaaacgtta gatacgccgc cggaaatcag cgcgtgcggc agttcgcgtt
     8161 tgatgtcttc acacgcgccg ataaagtcct gcgcgtagtt gttgtgctct tcaataccgg
     8221 tggcgaccgc gaagatgttc gggtcgaaga tgatatcttc tggcgggaag ccaacctctt
     8281 cggtgaggat tttgtacgcc cgacggcaaa tctcgatttt ccgtgcgcga gtatcggcct
     8341 gtccctgttc atcaaaggcc atcaccacca ctgccgcacc gtagcgacgc aacaatttcg
     8401 cgtgatggat aaaggcgtcg acgccctctt tcatcgagat tgagttaaca atgcctttgc
     8461 cctgaataca cttcagccct ttttcgataa cgtcccattt tgaggagtcg atcataatcg
     8521 gcacgcgagc gatatccggt tcaccggcaa tcagattgag aaaacgcacc atcgccgctt
     8581 cggcatcgag catcccttca tccatgttga tatcgataat ctgcgcgccg ttttccacct
     8641 gctgacgcgc cacatcctgc gcctcgctgt atttctcttc tttgatcagg cgcttgaact
     8701 tagcagagcc ggtgacgttg gtgcgttcac ccacgttcac aaacaggcta tcgtcgccaa
     8761 tgttcagcgg ctccaggcca gacaaacggc aggctacggg aatttccggc agtttgcgcg
     8821 gcgctaatcc ttctactgca cgactcatcg ctgcaatatg ttgcggcgtg gtcccgcagc
     8881 aaccaccgac gatattgaga aagcccgctt gcgcccattc acgtatctgt tttgccatcg
     8941 tgtcggcgtc gagatcgtat tcaccaaagg cgttaggcag cccggcgttc gggtgggcgg
     9001 tgacgtagca ttccgcaatc cgtgatagtt cctgcacgta ctggcgcagt tcatcgggcc
     9061 ccagcgcaca gttcaggcca aaggttagcg cttcggcgtg gcgcaatgag ttgtaaaatg
     9121 cttcggtggt ctgcccggag agcgtgcgcc cggaggcgtc ggtgatggtg ccggagatca
     9181 taatcggcag ctcaacgccc agcgcttcaa actccgtttt caccgcaaaa accgccgctt
     9241 tggcgttaag ggtgtcgaaa acggtttcaa tcaggatcag atccgcacca ccttccacca
     9301 gcgctttggt ggattcgcaa taggccgcca ccagctggtc aaaagtgatg ttgcggaatg
     9361 ccggatcgtt gacgtccgga gaaatagacg ccgtgcggtt ggttgggccg agaacaccgg
     9421 caacgtagcg cggtttctcc ggcgtgcgcg cggtccactc gtcagcacag gcgcgcgcca
     9481 gtttcgccgc cgcaaagttg atttccgccg acagggattc catctggtaa tccgccatcg
     9541 caatggtcgt ggagttgaag gtgttggttt cgatgatatc cgcgcccgct tcaaagtagg
     9601 cgttgtggat agcggcgatc acttccggtt tgctgagcac cagcaggtcg ttgttgcctt
     9661 tgagatcgca tggccagtcg gcaaagcgtt caccacgaaa atcggcttcg ttcagtcgat
     9721 aactctggat catggtgccc ataccgccgt ccagcaccag aatacgttca tttaactgcg
     9781 cacgcagttg ttccactttg ctgctcacac ttgctcccga cacgctcaac ccagatttaa
     9841 taaaaattca acaaaccata ctggcataaa cgcatctgtg gtaaaagcga ccaccacgca
     9901 acatgagatt tgttcaacat taactcatcg gatcagttca gcaactattg cattagctaa
     9961 caataaaaat gaaaatgatt cccacgatgc agaaaaagga gactgtcatg gtcgcaccca
    10021 ttcccgcgaa acgcggcaga aaacccgccg ttgccaccgc accagcgact ggacaggttc
    10081 agtctttaac gcgtggcctg aaattactgg agtggattgc cgaatccaat ggcagtgtgg
    10141 cactcacgga actggcgcaa caagccgggt tacccaattc cacgacccac cgcctgctaa
    10201 ccacaatgca acagcagggt ttcgtgcgtc aggttggcga actgggacac tgggcaatcg
    10261 gcgcacatgc ctttatggtc ggcagcagct ttctccagag tcgtaatttg ttagcaattg
    10321 ttcaccctat cctgcgcaat ctaatggaag agtctggcga aacggtcaat atggaggtgc
    10381 ttgatcaaag cgatcacgaa gcgattatta tcgaccaggt acagtgtacg catctgatgc
    10441 gaatgtccgc gcctatcggc ggtaaattgc cgatgcacgc ttccggtgca ggtaaagcct
    10501 ttttagccca actgagcgaa gaacaggtga cgaagctgct gcaccgcaaa gggttacatg
    10561 cctataccca cgcaacgctg gtgtctcctg tgcatttaaa agaagatctc gcccaaacgc
    10621 gcaaacgggg ttattcattt gacgatgagg aacatgcgct ggggctacgt tgccttgcag
    10681 cgtgtatttt cgatgagcac cgtgaaccgt ttgccgcaat ttctatttcc ggaccgattt
    10741 cacgtattac cgatgaccgc gtgaccgagt ttggcgcaat ggtgattaaa gcggcgaagg
    10801 aagtgacact ggcgtacggt ggaatgcgct gactttttct ggcgggcaga ggcaatattc
    10861 tgcccatcat a
//
LOCUS       DAJVUK010000145        10794 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.145, whole genome shotgun sequence.
ACCESSION   DAJVUK010000145 DAJVUK010000000
VERSION     DAJVUK010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10794
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.145"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..613
                     /locus_tag="OQQ57_003407"
                     /pseudo
     CDS             1..613
                     /locus_tag="OQQ57_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000521550.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
     gene            610..1224
                     /locus_tag="OQQ57_003408"
     CDS             610..1224
                     /locus_tag="OQQ57_003408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HCS1958045.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1281..2738)
                     /gene="pepD"
                     /locus_tag="OQQ57_003409"
     CDS             complement(1281..2738)
                     /gene="pepD"
                     /locus_tag="OQQ57_003409"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HCS1958046.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            2999..3457
                     /gene="gpt"
                     /locus_tag="OQQ57_003410"
     CDS             2999..3457
                     /gene="gpt"
                     /locus_tag="OQQ57_003410"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCS1958047.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3549..4793
                     /gene="frsA"
                     /locus_tag="OQQ57_003411"
     CDS             3549..4793
                     /gene="frsA"
                     /locus_tag="OQQ57_003411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HCS1958048.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4851..5252
                     /gene="crl"
                     /locus_tag="OQQ57_003412"
     CDS             4851..5252
                     /gene="crl"
                     /locus_tag="OQQ57_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HCS1958049.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5291..6346)
                     /gene="phoE"
                     /locus_tag="OQQ57_003413"
     CDS             complement(5291..6346)
                     /gene="phoE"
                     /locus_tag="OQQ57_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HCS1958050.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6634..7737
                     /gene="proB"
                     /locus_tag="OQQ57_003414"
     CDS             6634..7737
                     /gene="proB"
                     /locus_tag="OQQ57_003414"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HCS1958051.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7749..9002
                     /gene="proA"
                     /locus_tag="OQQ57_003415"
     CDS             7749..9002
                     /gene="proA"
                     /locus_tag="OQQ57_003415"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HCS1958052.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9117..9192
                     /locus_tag="OQQ57_003416"
     tRNA            9117..9192
                     /locus_tag="OQQ57_003416"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9150..9152,aa:Thr,seq:cgt)
     gene            complement(10247..10681)
                     /locus_tag="OQQ57_003417"
     CDS             complement(10247..10681)
                     /locus_tag="OQQ57_003417"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1958053.1"
                     /translation="MGYDSRLDRLATTSWHSFFNNITARGEIMEPYSLTLDEACHFLK
                     ISRPTAINWIRTGRLQATRKDPTKNKSPYLTTRQACIAALQSPLHTVQVSAGDGITEE
                     RKCHSSAEVKYGTPVSHCRTVKDLNSLLEQRTKGRRQNSMTS"
     gene            complement(10597..>10794)
                     /locus_tag="OQQ57_003418"
     CDS             complement(10597..>10794)
                     /locus_tag="OQQ57_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000206055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958054.1"
                     /translation="SLEVEPDERESYELFMEKHFGGLVDSRRAKNGDNEYMAWDMTLG
                     WIVWQQRAGIHFSTISQQEVK"
BASE COUNT         2566 a         2659 c         2786 g         2783 t
ORIGIN      
        1 agtctatttt acagcggcat attgcctcgt tctcgcatca tggtttgcct caaggcagtg
       61 acgacgcgct acggtatatt gcggaacatg acgatgcgct ggcgtttgcg tgtattaatc
      121 gccagatgat cgctttgcgc ataatgcaac aagttaaggc cacgggaagt ccggttctgg
      181 atgtggcgca taactttgtt agcgcgtgtc aaatcggcgt caacagggct ggttgcatcg
      241 taaaggtgcc acgccggatg acaacggtct ggtgattatt cccggttcac gtggtgatta
      301 ctcctggatt gtacagcctg ttgcgaacga aaaaacgctc cactcgctgg cgcatggggc
      361 agggcgtaaa tgggggcgca ccgagtgtaa atggcgtctg gcagcgaaat acacggtgac
      421 gcaactctcg cggactgaac ttggcagtcg gataatttgt cgcgataaac aactcatctt
      481 tgaagaagcg ccacaagcct ataaatcggc tgaaagcgtg gtgcaatgtc tggtgcaggc
      541 cggtttaatt attcctgtcg cgcggctgcg tccggtgcta acgctcaaaa acagtggagg
      601 gaaaaaagga tgatcttgct acaactctcc tcagcgcagg ggccggaaga atgttgtctc
      661 gcagtgaaaa aggcgctgga caggctaatt aaagaagctg cccgacaaga cgtcgcggta
      721 acggtgttgg aaacagaaac gggccgctac tctgacacgc tgcgttcagc tctggtttct
      781 ctggatggcg ataacgcatg ggcattaagc gaaagctggt gtggcactat tcagtggatt
      841 tgtccgagtc cgtatcggcc tcatcatggg cgcaaaaact ggtttctggg cattgggcgt
      901 tttaccgctg atgagcagga gcaatccgat gcgatccggt atgagacgct gcgttcgtcg
      961 gggccgggcg gtcaacatgt caataaaacc gactcggcgg tacgcgccac gcatttggca
     1021 tccggtatta gcgtgaaggt tcagtcagag cgtagtcagc atgctaacaa gcggctggca
     1081 cgattgctga ttgcctggaa gctggagcag cagcaacagg aaaatagcgc ggtgctgaaa
     1141 tcgcagcggc gaatgttcca tcaccagatt gaacgtggca acccgagacg gacatttaca
     1201 gggatggctt ttatcgaagg ataatgaagg atgaaactgc cggaaggcga ttaaacgcca
     1261 tccggcagca aatcaaataa ttacttcgcc ggaatttctt tcagcagttc agtcagcagt
     1321 gtccagtaat gacctacgct ttcgatgtga acttgctcat ccggagagtg tggaccggtg
     1381 atagttggcc cgatagaaac catgtccatt tccggatacg gttttttgaa cagaccacat
     1441 tccaggcccg cgtggataat ctggatgttc ggcgtcttgt tgaacaggcg ctgataggtt
     1501 tcacgtacca gatgcatcac cggagaatta gcgtccggct gccagccagg atatgcgcct
     1561 ttcgcttcgg ttttcgcgcc agccagttta cccagcgaat ccagcatgct caccacgtag
     1621 tctttaccgc tgtcgatcag tgaacggatc aggcagtgaa tttctacgtt attgtcagtc
     1681 atggtcacca caccgacgtt cagggaggtt tcaaccacac ctttggctac atcggagttg
     1741 cggatcacac cgttcggggt ggcgttcagc agacgaataa aggtatcgcg agatttcgca
     1801 atcagggcag ctttatcgtt cgctacagag tccagcaaca aggccagatt tttctctttc
     1861 tctgccagct cgtttttcag gatctcctga taggtattca ccagagattt cagtgcgtcg
     1921 actttatcag ctgcgacagc aatggtcgca aaggcttcac gcgggatggc gttacgcagt
     1981 gtgccgccgt tgaaatcgat aaggcgcagg tccagttctt ctgcatgacc cgccaggaag
     2041 cgcaccagca gtttgttggc attacccagg ccaacgtgga tttcaccgcc ggagtgaccg
     2101 cctttcagac cttttaaggt taacttgaag gtttcaaaac cagctggaac cgcttcacga
     2161 tctaaatgca ggttggaggt gaagtcgata ccccccgcac aacccatgta gatttcacct
     2221 tcttcttcgg agtcggtgtt aatcagaata tcagcctgca accagttgct ctgtaagcca
     2281 aaagcaccgt ccataccggc ttcttcggtc atggtcagca gcacttccag cggaccgtga
     2341 accacgtttt cgtcagccag aaccgccagt gcagaggcca taccaatgcc gttatccgca
     2401 cccagcgtgg tgccgcgcgc tttaacccat tcgccatcaa tataaggctg gataggatct
     2461 ttcgtgaagt catgcacggt gtcgttattt ttctgcggca ccatatcgag gtgggcctgt
     2521 aagacgaccg gtttacgatt ttccatacct gcggtagcag gtttacgaat caggatatta
     2581 cctacctgat cgcgttcgac atggaaacct ttctcttttg cccaaccaac aatgtattca
     2641 gcgagttgct cttcatgata ggacgggtgc ggaatagaac agattttggc aaaaatatcc
     2701 cacagcggct gtggagataa ttgagacagt tcagacacgt taagtctcct tgtcgatcac
     2761 ccgcaaaaca gtattgcagg tcacagggtt agcagaaaat gttgtcaaca caagacaggc
     2821 ttgcgagata tgtttgagaa taccacttta tcccgcgtca gggagaggca gtgcgtaaaa
     2881 agacgcggac tcatgtgaaa tactggtttt tagtgcgcca gatctctata atctcgcgca
     2941 acctattttc ccctcgaaca ctttttaagc cgtagataaa caggctggga cacttcacat
     3001 gagcgaaaaa tacatcgtca cctgggacat gttgcagatc catgcacgta aactcgcaag
     3061 ccgactgatg ccttctgaac aatggaaagg cattattgcc gtaagccgtg gcggtctggt
     3121 accgggtgcg ttactggcgc gtgaactggg tattcgtcat gtcgataccg tttgtatttc
     3181 cagctacgat cacgacaacc agcgagagct taaagtgctg aaacgcgcag aaggcgatgg
     3241 cgaaggcttc atagttattg atgacctggt ggataccggt ggtactgctg ttgcgattcg
     3301 tgaaatgtat ccaaaagcgc actttgtcac catcttcgca aaaccggctg gtcgtccgct
     3361 ggttgatgac tatgttgttg atattccgca agatacctgg atcgaacagc cgtgggatat
     3421 gggcgtcgta ttcgtcccgc caatctccgg tcgctaatct tttcaacgcc tggcactgcc
     3481 gggcgttgtt ctttttaact tcaggcaggt tacaatagtt tccagtaagt attctggagg
     3541 ctgcatccat gacacaggca aacctgagcg aaaccctgtt caaaccccgc tttaaacatc
     3601 ctgaaacctc gacgctagtc cgccgcttta atcacggcgc acaaccgcct gtgcagtcgg
     3661 ctcttgatgg taaaaccatc cctcactggt atcgcatgat taaccgtctg atgtggatct
     3721 ggcgcggtat tgacccacgt gaaatcctcg acgtccaggc acgtattgtg atgagcgatg
     3781 ctgaacgtac cgacgatgat ttatacgata ctgtgattgg ctaccgtggt ggcaactgga
     3841 tttatgagtg ggccacccag gcgatggtgt ggcaacaaaa agcctgtgcg gaagaagatc
     3901 cgcaactcag tggtcgacac tggctgcatg cggctacgtt gtacaacatt gccgcctatc
     3961 ctcatctgaa aggagatgac ctggccgagc aagcgcaggc tttatcaaac cgcgcctatg
     4021 aagaggccgc ccagcgtctg ccgggcacga tgcggcagat ggagtttacc gtacccggcg
     4081 gtgcgcccat caccggcttt ttgcatatgc cgaaaggcga tggcccgttc ccgacagtat
     4141 taatgtgtgg tggtctggat gcgatgcaga cggactatta cagcctgtat gaacgttatt
     4201 ttgcgccgcg cggcattgtg atgctgacta ttgatatgcc gtcggtgggc ttttcttcaa
     4261 aatggaagct cacccaggac tccagcctgt tgcatcagca cgtcttaaag gcgctgccta
     4321 acgtaccgtg ggtggatcac actcgcgtcg cggcctttgg tttccgtttc ggcgctaacg
     4381 ttgccgtgcg tctggcatat cttgaatcgc cgcgtctgaa agcggttgcc tgtcttggtc
     4441 cggtagttca taccctgttg agtgatttta agtgccagca acaggtgccg gaaatgtatc
     4501 ttgacgttct ggcgagtcgt ttggggatgc atgatgcttc cgacgaagcg ttacgcgtgg
     4561 agctgaatcg ctattcatta aaagtgcaag gattgctggg acgtcgctgc ccaacgccaa
     4621 tgttatcagg ctactggaag aacgatccgt tcagcccgga agaggactca cgcttaatca
     4681 cctcatcatc tgctgacggt aaattattag agatcccatt taacccggtg tatcggaatt
     4741 ttgacaaagg tcttcaggaa atcaccggct ggatcgaaaa acgcttgtgt taaaaatttg
     4801 ctaaattttg ccaatttggt aaaacagttg catcacaaca ggagatagca atgacgttac
     4861 cgagtggaca cccgaagagc agattgatca aaaaatttac cgcactaggc ccgtatattc
     4921 gtgaaggtaa gtgcgaagat aatcgattct ttttcgattg tctggctgta tgcgtcaacg
     4981 tgaaaccggc accggaagtg cgtgaattct ggggctggtg gatggagctg gaagcgcagg
     5041 aatcccgttt tacctacagc taccagtttg gtctgttcga taaagcaggc gactggaaga
     5101 gtgttccggt aaaagatact gaagtggttg aacgactgga gcacaccctg cgtgagtttc
     5161 acgagaagct gcgtgaactg ctgacgacgc tgaatctgaa gctggaaccg gcggatgatt
     5221 ttcgtgacga gccggtgaag ttaacggcgt gagtgaaatg tgccggatgc atcacatccg
     5281 gcaatatcta ttaaaactga tacgtcatcc caatcgcgac aatatcatca ttattaatat
     5341 tcaatttgtt atcgctatcc agttggttga ttttataatc aacaaatgct gacatatttt
     5401 tgttgaaata atacgtagca ccgacgtcga tataattaac cagatcttca ccaccgatgc
     5461 cctcaatatc tttccctttc gataagacat aacccagcga tggacgcaga ccaaagtcaa
     5521 actggtattg agcgaccgct tcaaagttct gtgtcttatt ggcaaagccg ccagttattg
     5581 gcgtcatttt gcgagtttca gaatagaaag ttgccagata aatattattg gcatcgtatt
     5641 tcagacctgt tgcccatgct tctgcacgct tgcctgtgcc acggctttgc aggttctgct
     5701 cgttggtgcg atctgagttg gtataggccc cactaatggc gaaatcgctg ccgccaaagt
     5761 catatgtcaa tgacgtgccg aagccatcgc cgttttgctt tttaacgtcg cggttttcgt
     5821 ttttcccttg atattgcagg gttaagttca ggccatcgat aacgccgaag aagtcggtgt
     5881 tccgatacgt cgccagaccg ctggcgcgtt tggtcataaa gttgtcggtc tgcgccgagg
     5941 agtcgccacc aaattccgga aacatatcgg tccaggcttc cacgtcatac aacgcgccca
     6001 ggttacgacc ataatcgaaa gaacccaaat ctttatattt caacccggca aaagcgagac
     6061 gcgttttttg ctgtgcagta tcactctctg ctttattacc ggcaaactct gcttcccaac
     6121 gaccataacc agtcagttga tcgttaattt gtgtttcgcc tttaaaacca aaacggatat
     6181 aactctggtc gccatcttta ctgtcgttat cactcatata atgcatggct ttaactttgc
     6241 catagacatc cagtttatta ccgtctttgt tatatatttc tgcggcctgt acggatgcag
     6301 atgccacaat gcccatcacc actaatgcca gagtgctctt tttcattttc attcctgatt
     6361 ttaattaacg cgcgaatatt cagcgggaga gccccgttga aaacaggaaa gtttttaacc
     6421 tgagattgtt aaagatatat tacagattaa taatattctt aaaatgtggt aatttattaa
     6481 atctgtaata aaagcgtaaa caactgccgc taggcttgct gatcccgcgc aacaaaacgc
     6541 catgctttgc tcgcagatgg ttggcaaccg acgacagtcc tgctaaaacg ttcgtttgat
     6601 atcatttttc ctaaaattga atggcagaga atcatgagtg acagccagac gctggtggta
     6661 aaactcggca ccagtgtgct aacaggcgga tcgcgccgtc tgaaccgtgc ccatatcgtt
     6721 gaacttgttc gccagtgcgc gcagttacat gccgccgggc atcggattgt tattgtgacg
     6781 tcgggcgcga tcgccgccgg acgtgagcac ttgggttacc cggaactgcc agcgactatc
     6841 gcctcgaaac aactgctggc agcggtaggg cagagtcgac tgattcaact gtgggaacag
     6901 ctgttttcga tttatggcat tcacgtcggg caaatgctgc tgacccgtgc tgatatggaa
     6961 gaccgtgaac gcttcctgaa cgcccgcgac accctgcgtg cgttgctcga taacaatatc
     7021 gttccggtaa tcaatgagaa cgatgctgtc gctacggcag agattaaagt cggcgataac
     7081 gataaccttt ctgcgctggc ggcgattctg gcgggtgccg ataaactgtt gctgctgacc
     7141 gatcaaaaag gtttgtatac cgctgacccg cgcagcaatc cgcaggcaga actgattaaa
     7201 gatgtttacg gcattgatga cgcactgcgc gcgattgccg gtgacagcgt ttcaggcctc
     7261 ggaactggcg gcatgagtac caaattgcag gccgctgacg tggcttgccg tgcgggtatc
     7321 gacaccatta ttgccgcggg cagcaagccg ggcgttattg gtgatgtgat ggaaggcatt
     7381 tccgtcggta cgctgttcca tgcccaggcg actccgcttg aaaaccgtaa acgctggatt
     7441 ttcggtgcgc cgccggcggg tgaaatcacg gtagatgaag gggcaactgc cgccattctg
     7501 gaacgcggca gctccctgtt gccgaaaggc attaaaagcg tgactggcaa tttctcgcgt
     7561 ggtgaagtca tccgcatttg caacctcgaa ggtcgcgata tcgcccacgg tgtcagtcgt
     7621 tacaacagcg atgcattacg ccgtattgcc ggacaccact cgcaagaaat tgatgcaata
     7681 ctgggatatg aatacggccc ggttgccgtt caccgtgatg acatgattac ccgttaagga
     7741 gctggccgat gctggaacaa atgggcattg ccgcgaagca agcctcgtat aaattagcgc
     7801 aactctccag ccgcgaaaaa aatcgcgtgc tggaaaaaat cgccgatgaa ctggaagcac
     7861 aaagcgaaat cattctcaac gctaacgccc aggatgttgc tgacgcgcga gccaatggcc
     7921 ttagcgaagc gatgcttgac cgtctggcac tgacgcccgc acggctgaaa ggcattgccg
     7981 acgatgtacg tcaggtgtgc aacctcgccg atccggtggg gcaggtaatc gatggcggcg
     8041 tactggacag cggcctgcgt cttgagcgtc gtcgcgtacc gctgggagtt attggcgtga
     8101 tttatgaagc gcgcccgaac gtgacggttg atgtcgcttc gctgtgcctg aaaaccggta
     8161 atgcggtgat cctgcgcggt ggcaaagaaa cgtgtcgcac taacgctgca acggtggcgg
     8221 tgattcagga cgccctgaaa tcctgcggct taccggcggg tgccgtgcag gcgattgata
     8281 atcctgaccg tgcgctggtc agtgaaatgc tgcgtatgga taaatacatc gacatgctga
     8341 tcccgcgtgg tggcgctggt ttgcataaac tgtgccgtga acagtcgaca atcccggtga
     8401 tcacaggtgg tataggcgta tgccatattt acgttgatga aagtgtagag atcgctgaag
     8461 cattaaaagt gatcgtcaac gcgaaaactc agcgtccgag cacatgtaat acggttgaaa
     8521 cgttgctggt gaataaaaac atcgccgata gcttcctgcc cgcattaagc aaacaaatgg
     8581 cggaaagcgg cgtgacatta cacgcagatg cagctgcact ggcgcagttg caggcaggcc
     8641 ctgcgaaggt ggttgctgtt aaagccgaag agtatgacga tgagtttctg tcattagatt
     8701 tgaacgtcaa aatcgtcagc gatcttgacg atgccatcgc ccatattcgt gaacacggca
     8761 cacaacactc cgatgcgatc ctgacctgcg atatgcgcaa cgcccagcgt tttgttaacg
     8821 aagtggattc gtccgctgtt tacgttaacg cctctacgcg ttttaccgac ggcggccagt
     8881 ttggtctggg tgcggaagtg gcggtaagca cacaaaaact ccacgcgcgt ggcccaatgg
     8941 ggctggaagc actgaccact tacaagtgga tcggcattgg tgattacacc attcgtgcgt
     9001 aaataaaacc gggtgatgca aaagtagcca tttgattcac aaggccattg acgcatcgcc
     9061 cggttagttt taaccttgtc caccgtgatt cacgttcgtg aacatgtcct ttcagggccg
     9121 atatagctca gttggtagag cagcgcattc gtaatgcgaa ggtcgtaggt tcgactccta
     9181 ttatcggcac catttaaatc aataagttac acatcattag tacgttcctt atttcttgac
     9241 tgggacaaat ttgggaccga tgggttcaga atcgagtcta tttgccgtgc gtgttcggta
     9301 aggtgattag gtgcgaggtg agcatatcga cgaaccattt cgatagactc ccagcctccc
     9361 atttcctgta acactgataa cgggactccg gcttgaacca gccaacttgc ccaggtgtgt
     9421 ctcaagtcgt gaaatctgaa atcatcaata cctgctcgtc tcagcgccgc tttccaggct
     9481 gtgtttgcgt cataccgcat cttcctgact gttggcgctt tcgttccgtc tggtttggta
     9541 cagctttcct tatacacaaa tacccaacgg tgatgattcc cgatttgttt tttcaatacg
     9601 cgacatgcag tatcattcag cgcaacgcca attgcgcggt ttgatttact ctcttccggg
     9661 tttatccatg ccacccggcg ctgcatgtct atttgttgcc attcaaggtt gatgatgttc
     9721 gagcgtctta agcctgttgc aagtgcaaat tcaacaacag actttaatgg ctccggacat
     9781 tcatcaatca gcctttgtgc ttcatgaggc tccagccagc ggatccgttt attctttggt
     9841 tgaggcactt taataattgg tgccttatcc agcattttcc attcacgctc tgcggctctt
     9901 agcagggcct ttataaatga aagatgcgta gccttcgttg caacggacgc tggttttggc
     9961 gtgtattctg gaacaggttt cccttttttt ctgcatgctt ctgccctgag tttccagttt
    10021 tcctcatgac gccggttcgt cattttctgc attgctgaat aaatttttga ttcagtaatg
    10081 tctcttagtt gcattcctgc gaaatgttga agccagaatc cgatccggct tttgtcatcg
    10141 tccagtgatt ttttatgtgc tttctcttca agccacctga cacacgcttc ctcgaacgtt
    10201 atatcaggaa tttcaccaag tttgctgacc cgccatgctt cagcctttag cttgtcatgg
    10261 agttctgtcg cctgcctttt gtcctttgtt ccaagagact gtttaaatct tttaccgttc
    10321 ggcaatgtga aactggcgta ccatatttca cctctgcgga agagtgacat tttctttcct
    10381 ctgttatgcc atcacccgcg ctcacctgga cagtatgcag cggagactga agcgccgcaa
    10441 tgcaggcttg tcgtgttgtg aggtaaggag atttattctt agtgggatct ttgcgtgttg
    10501 cctgcagacg ccctgtgcgt atccagttaa tggcagtcgg tctggatatc ttgagaaaat
    10561 gacaggcctc atctagcgtg aggctgtatg gttccattat ttcacctctt gctgtgatat
    10621 tgttgaaaaa tgaatgccag ctcgttgttg ccagacgatc caaccgagag tcatatccca
    10681 tgccatgtat tcgttatcgc cgttttttgc tctccgacta tctactaagc caccgaaatg
    10741 tttttccata aataattcat aggattcgcg ttcatctggc tctacttcca gaga
//
LOCUS       DAJVUK010000146        10664 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.146, whole genome shotgun sequence.
ACCESSION   DAJVUK010000146 DAJVUK010000000
VERSION     DAJVUK010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10664
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.146"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            311..1609
                     /gene="kgtP"
                     /locus_tag="OQQ57_003419"
     CDS             311..1609
                     /gene="kgtP"
                     /locus_tag="OQQ57_003419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HCS1958055.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
                     SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
                     ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
     gene            complement(1606..1929)
                     /locus_tag="OQQ57_003420"
     CDS             complement(1606..1929)
                     /locus_tag="OQQ57_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417081.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HCS1958056.1"
                     /translation="MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNE
                     YSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVW
                     QLTRH"
     gene            complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="OQQ57_003421"
     CDS             complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="OQQ57_003421"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HCS1958057.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYKAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENSGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRLFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            complement(3444..6104)
                     /gene="pat"
                     /locus_tag="OQQ57_003422"
     CDS             complement(3444..6104)
                     /gene="pat"
                     /locus_tag="OQQ57_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HCS1958058.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLRGDRLMIISNGAAPSALALDALWSRNGKLATLSEETCQKLRDALPEHV
                     AISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
                     RIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            complement(6136..6834)
                     /gene="tapT"
                     /locus_tag="OQQ57_003423"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
     CDS             complement(6136..6834)
                     /gene="tapT"
                     /locus_tag="OQQ57_003423"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HCS1958059.1"
                     /translation="MTENTVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCS
                     TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNP
                     DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS
                     VDLSRLSAYRLREALAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT
                     QHLGSITAEQLESV"
     gene            complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="OQQ57_003424"
     CDS             complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="OQQ57_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HCS1958060.1"
                     /translation="MNTVCTHCQSINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            7529..8566
                     /locus_tag="OQQ57_003425"
     CDS             7529..8566
                     /locus_tag="OQQ57_003425"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HCS1958061.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGGAELVQSITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            complement(8614..9303)
                     /gene="ung"
                     /locus_tag="OQQ57_003426"
     CDS             complement(8614..9303)
                     /gene="ung"
                     /locus_tag="OQQ57_003426"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HCS1958062.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            9608..9991
                     /gene="grcA"
                     /locus_tag="OQQ57_003427"
     CDS             9608..9991
                     /gene="grcA"
                     /locus_tag="OQQ57_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007728348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HCS1958063.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="OQQ57_003428"
     CDS             complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="OQQ57_003428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HCS1958064.1"
                     /translation="MTPTLLSAFWTYTLITAMTPRPNNILALSSATSHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
BASE COUNT         2656 a         2704 c         2740 g         2564 t
ORIGIN      
        1 aaaggccatc cgtcaggatg gcctttttgc attggcgcag aaaaaatgac tgatgcgacg
       61 ctgcgcgtct tatactccca catatgccag attcagcaac ggatgcggtt tccccaactt
      121 gcctacttcc atacgtgtcc tccttaccag aatttatcct taagctcctc aataaccatt
      181 ttcctgctaa ctaaattcat ggttaatgtt gcataataat acgtaacaaa tgcataacat
      241 tttctttacc aaaagaaata aacaaaagtg accaacaaaa gcatcggatt acggcaggag
      301 acataatggc atggctgaaa gtactgtaac ggcagacagc aaactgacaa gtagtgatac
      361 tcgtcgccgc atttgggcga ttgtgggggc ctcttcaggt aatctggtcg agtggttcga
      421 tttctatgtc tactcgttct gttcactcta cttcgcccac attttcttcc cttccgggaa
      481 cacgacgact caactactac aaacagcagg tgtttttgct gcgggattcc tgatgcgccc
      541 aataggcggt tggctatttg gccgcatagc cgataaacat ggtcgcaaaa aatcgatgct
      601 gttatcggtg tgtatgatgt gtttcggatc gctggttatc gcctgcctcc caggttatga
      661 aactataggt acgtgggctc cggcattatt gcttctcgcg cgtttatttc agggattatc
      721 cgttggcgga gaatatggca ccagcgccac ctatatgagt gaagttgccg ttgaagggcg
      781 caaaggtttt tacgcatcat ttcagtatgt gacgttgatc ggcggacaac tgctagccct
      841 actggttgtc gtggttttac aacacaccat ggaagacgct gcactcagag agtggggatg
      901 gcgtattcct ttcgcgttag gagctgtgtt agctgttgtg gcgttgtggt tacgtcgtca
      961 attagatgaa acttcgcaac aagaaacgcg cgctttaaaa gaagctggat ctctgaaagg
     1021 attatggcgc aatcgccgtg cattcatcat ggttctcggt tttaccgctg cgggctccct
     1081 ttgtttctat accttcacca cttatatgca gaagtatctg gtaaatactg cgggaatgca
     1141 tgccaacgtg gcgagtggca ttatgactgc cgcattgttt gtattcatgc ttattcaacc
     1201 actcattggc gcgctgtcgg ataagattgg tcgccgtacc tcaatgttat gtttcggttc
     1261 gctggcagcc atttttaccg ttcctattct ctcagcattg caaaacgttt cctcgcctta
     1321 tgccgctttt ggtctggtga tgtgtgccct gctgatagtg agtttttata catcaatcag
     1381 tggaatactg aaggctgaga tgttcccggc acaggttcgc gcattaggcg ttggtctgtc
     1441 atatgcggtc gctaatgcta tatttggtgg ttcggcggag tacgtagcgt tgtcgctgaa
     1501 atcaatagga atggaaacag ccttcttctg gtatgtgacc ttgatggccg tggtggcgtt
     1561 tctggtttct ttgatgctac atcgcaaagg gaaggggatg cgtctttagt gacgggtcag
     1621 ttgccagacg gtatagccgg tgcttgcacc ggcgacatcc caggccaaat ccttccagct
     1681 ccagccgctc ccttcggggc ggctatccca aagctctttt gacgccccca aactgacaga
     1741 gaacatcaat ccaaacatgg cactgcgatc ccggctcatc ccctgatgct gtgaatattc
     1801 atttccggcg gcggaaagca tcgccgaggc gataaagtgt tgagctttat cctgcccgct
     1861 ccagctatcg ttagccatat ggctgcatcc agaaagtaac aatagcgaac agacaaaaag
     1921 aatacgcaaa acgtggcctc caaaaaacaa accccgtaca ggacggggtt gtgattacag
     1981 gatgcggcta attaatcggt cgatgcggat acggcgcaaa cggcggatga gtttacgaac
     2041 cttcaccgga taatcggcaa tactttgcag atcgcgatag tgcttaacga tggtggtatg
     2101 ctcgcggatc agctccagtt ctttctctcg ctgcggcgca agctccagtt gtggatcgtg
     2161 gatcaaaatg gcgttttcca gatccagacg ccaggcgcgc gggttcaggt tattaccggt
     2221 gatcaacatc cacttatcat caacccacat ccctttcagg tgataggtgt tgtcgtcatc
     2281 tttccataac cgaaccacta gctggtcagt attgacgtaa tactgcaaac ggctcaggaa
     2341 aagacgcaga ttgatctcat agagataagg caatgcgcca attatcttga aaggttcatc
     2401 ttccggaatg tagaagtcgt tcgcggtttt atcaccaaca ataatttcga cctttttccc
     2461 ttcgcgcagc aactggataa tattgcgcac aaggattgct ggcaggttga agtatggcgt
     2521 acagatggtt agtttctgct cggcacaagg cataagatgg aaaatggtct tgttcaacag
     2581 actcgatttc cccagcccca ctagcggcgt tacggaaagc tgatcgttgt cggcatcgcc
     2641 ctggaaatga taagcggcat cacgcagctc ctggcggaac agacgaatat cgttcttgat
     2701 ttccgggctt tttggccgat taacatcatc cagacgatta acgccgcggc cattcataat
     2761 attctgtgta acccattcaa acataatgtc tgacatctta cggttacgga taagatgata
     2821 acggtcgtag cgatatttat cgtgctgatg caggtaaaca tcgttcaggc tggcaccgct
     2881 ataaagtacg ctatcgtcga tgataaagcc tttaaagtgc agaacaccaa gggcttcacg
     2941 ggtattgatt ggaacgccat aaaccggaac atctacgccc gaattttcct gcgccatgcg
     3001 gcagtaccag tcagcgttag tgttagatgc cgcagcgcca atgcgtccac gttgtgcacg
     3061 atgccagtcg accagcaccc gcacatccag ttccggacgc tgccttttag ctttatacaa
     3121 cgcgttcaga atgcctttgc caccgtcatc ctgttcgaga tacagggcga caatgcaaat
     3181 gcgctgcttc gcgctggcta ttttttccag cagcgtctcc cggaagtcgg cgggagcgta
     3241 aaagaaatcg acatcatcaa ctgattgaga aatcttgggt agttgggcaa ggtgttgttg
     3301 atgtttatta cgcttaaatt ttgacaacat cacagtgcat ttcttctctg ttcattgaag
     3361 gatcctctgt gcaatgcaga cgacataagc gggcaataat aacaccagtc ccgattaagt
     3421 agtcaacatt tccagtacct tactcatgat tcctcgcgtt gggcaagatt tagcgtaagc
     3481 ccaacgatcc cctcttcgag ctggatatca acgttaaacc cgagcttgcg ggctagcgcc
     3541 accatgccac gattgtttgg catcgtaata ccattcagac gttgtagtcc gtgatctcgc
     3601 gtataggtaa tcaacttttc cattaagcgt cgacctaagc ctaacccttt gagatccgag
     3661 cgaaccagca cagcaaattc ggcatcgatg ttatcaggat cggaaatcgc acgcgtgacg
     3721 ccgaggatct cttccgtttg atcaatacgt cgtaccgcta caaacgccat ttcccgatcg
     3781 tagtcgatct gtgtcatgtt ggctaaatct tcatgggtaa attcgttgat ctcgctaaag
     3841 tagcggtaat aaagatcttc tttggtgact cgcgaaatga attgctgaag ttgtggctca
     3901 tcttctggca aaatcgggcg gaacaagcag cgttcaccgt ttttcaattc tacccattct
     3961 tccagctgat gcggataagg gcgcactgcc agccgactct cgttatcgcc ttcaaacggc
     4021 gagatatcca gcgtgacatc cagcgcggta aattcactgc cagaagccag caaaggatga
     4081 atatccagac gctgaatttc cgggcaatcg acaatcaagt tggaaacctg caccagaagc
     4141 tggctcaagc ctgcaacatc caatgggcgt agcgcactgc gcgcacgaat ctttttactt
     4201 ttgatcccct gaataaccag atagcgggcc aggttcatgt tcagcggcgg cagtgcgacg
     4261 acggcttgat cttcaggacg ccactccaca ccgccttcac ccagcatgat caacggcccg
     4321 aaaaccggat cgtgcccaac cacaacccgc aactcctgag cgccagcacg gttagccata
     4381 ctttgcacca acaggccgtg gatccgcgcc tgcggccagg ccatttttac gcgatcgaaa
     4441 atggcgtttg ccgcttgctg gacttcattg gctgtacgca agtacagcat gacgccctga
     4501 acttccgatt tatgtggaat atccggcgaa cgcaatttca gcgccaccgg ataaccaatc
     4561 tgttcggcaa tatgcaccgc ttcggtgcta tcgctggcaa tccaggtagg gagcgtgttc
     4621 atgccatacg cttgcaggat gggctgaact tcatgggtat cgagcgacgt agccccttcg
     4681 gcaatcgcct gttgcaacag aagatgcgct tctgcggtat tggaagtcag attgctgggc
     4741 aacgccggcg tttcgcgtag ttgcttctga ttacgccggt actccaccat atgcataaaa
     4801 gcagtgatgg ttccttccgg ggtacggtag gtcggcagcc cggcttcgct gaataaacgt
     4861 cgtgcctctt gcgaggagtg ctcgccgcac cagttcgtca gcaaagagac atatttgctg
     4921 cggggatgat gctttaccgc ttcaattaat acttgcgcgc tttctgttgc gggagcagcg
     4981 gcgctgggcg aatgaataac catcagcgcg tcaaaatcct ggctgtggag cagaatatcc
     5041 agcgttttaa tatagtgctc actgctggcg tcatcgcgta gatcgagcgg gttagatatt
     5101 gccacatgtt ctggcagtgc atcgcgcagt ttctggcagg tttcttcgct tagcgttgcc
     5161 agcttgccat tgcgtgacca taaggcatcc agcgccagcg cggaaggcgc agcaccgttg
     5221 ctgataatca tcagccggtc gccacgtagc gggcgcatat ggctaagggt ttccaccgcc
     5281 gaaaacagct cgtgggtgtc ctgtacccgc aacaaaccgg cacgctgaat agccgcatcc
     5341 catgccgggt ccattcctgc cgtggtgttg agcagtcgct gtgccgccgg gctacgtccg
     5401 cttttaatca ccagaatcgg tttattacgc gaggcactac gggccgccga aacaaagcgt
     5461 cgcgcgtcgc ttaactgttc gagatagagc aggatggcgc tggttttact gtcgcgtgcc
     5521 agatagtcaa gcaattcatc aacgtcgata tccaggctgt cgccgagcgc aataaagtag
     5581 gaaaagccca tcttacgctg ttgcgcccag tcgaggatgg tgttggagac ggcagccgat
     5641 tgcgaaataa acgccagctt gccgcgttta atcggcacag gcgaaaagct ggcattcaga
     5701 ccttgccagg gagccagtaa acccagactg tttggtccaa gcaggcgcat gttatggcgc
     5761 agggcgcagg cgcggagatc ttcgtgttgc gatgccgggg cggaaagaat aatgcaggtt
     5821 ttacagcctt tctcgccgag ctcttccaga agagcaagat tacggctggc attggtacat
     5881 aaaaccgcaa ggtcgggtgt aaagggcaag ctggcaatat ccggccaggc caacacaccc
     5941 aacaccgctt tccaggctgg cgtcaccggg agtaccggtc cgttaaagcc tcccgccagc
     6001 aggttacgca tcatcaggta acctgcgcga ttgggtttca tcgacgcgcc aattaccgct
     6061 atcgattttg gtcgcagtag tgcttccagt cctcgctgac tcataccggt ctcccgcaga
     6121 agtgaccgaa tgattttaaa cgctttctaa ctgttctgct gtgatgctac ccagatgttg
     6181 cgttttccct gccagatagc gtgttttaaa gcgggtaaaa tgctcgccta accctgctgc
     6241 cgccccggta tcgccggcca tatctaacag tgcgatggct acctcggcag tacaatattg
     6301 gccttcagcc agggcttcac gcaggcgata ggcagaaagc cgggaaagat cgacggaaat
     6361 gacgggaaga ttatccagat acggactttt acgaaacatc ttgcgagctt ccggccaggt
     6421 accatcgagc atgataaaca gcggtggctt accggcaggt ggtgtgaaga tcacttcccg
     6481 ttgctcatca gcatacgagg cgggaaagac caccattggc tgataatccg ggttttgtac
     6541 cagatccagc aaatcctgcg agggttcggt acgcgaccat tgaaacgcaa cggtatcagg
     6601 caaaatatca gcaatcagac gcccggtatt actgggcttc attggctcgg tgtcgaacat
     6661 cagcaaacag aagcgacttt ttgcttgtgc tggggtaatt gtcgaacaga gacataattt
     6721 ctctggcaaa agacagcgtt ggcagcgacg aacgcgatta ccgcgggcaa gaaaaggacg
     6781 tgttgcgcgc gcaatacgct cggcgcgtaa ctggagaaca gtgttttcgg tcataagaga
     6841 gcgtcgaaaa aacgccattg tcgcagagga gaaaacgggg cacaagatgc gccccggtaa
     6901 gattaaagag attcgttcag ccagctatcg aacggagctt tcggtactgc gccattaagc
     6961 atgtcgacaa cctgaccgtt tttgaaaatc atgatcgtcg gtatactacg aattccaaag
     7021 cgactgctca attcacgttc agcttcggta ttcactttca caaagcgcac tttaccgcta
     7081 cgctcttgcg cgacatcttc aaaaattggt gcgaaattac ggcaggggcc gcaccacggt
     7141 gcccagaagt cgatcaccac aggtagatca tccttcagca atttgtcgag tgtttcaccg
     7201 gtcgcattaa tcacctctcc gtcaaacaag tcgtgaccgc agcgtccgca ttttgccgca
     7261 tcttcgatcc gatcgtcggg aatgcgattg atggactgac aatgggtaca aacggtattc
     7321 ataactaacc tcgggatgag taaggagact tatcggcaac gacgccggta tgtttctaat
     7381 atgttacata ttatcgggga cattgttcca gacaacaatc tgttttattc aataggtatg
     7441 atagtcgcag gctttggtac gaaatcatgg agaaccgcgc ggacttcggg taatctgcgc
     7501 gcttcgcgca gcgctggtgg agaaaagcat gaacgatgaa atgaaaggta aaagcggcaa
     7561 ggtcaaagtg atgtatgtcc gcagtgatga tgattctgat aaacgtaccc acaacccgcg
     7621 taccgggaaa gggggcgggc gtccaggaaa atctcgtgct gacggtggcc gtcgccccgc
     7681 ccgcgatgac aaacagagtc agccccgtga ccgcaagtgg gaagattcgc cgtggcgcac
     7741 ggtttcccgc gcgccgggtg atgagacgcc ggaaaaggcc gatcacggtg gcatcagtgg
     7801 taaaagtttt attgatccgg aagtgttgcg tcgtcagcgt gcggaagaaa cccgcgtcta
     7861 cggcgaaaac gcctgtcagg cactgttcca gagccgtccg gaagcaattg ttcgcgcctg
     7921 gtttatccag agcgtaacgc cacgttttaa agaagccttg cgctggatgg cggcaaaccg
     7981 caaagcgtac catgtggtgg atgaagctga attgacaaaa gcgtcaggca cggaacatca
     8041 cggcggcgtt tgcttcctga tcaaaaagcg taacggtaca accgtgcagc agtgggtaag
     8101 ccaggcaggc gcgcaggatt gcgttctggc actggaaaac gaatctaacc cgcataacct
     8161 gggtggcatg atgcgcagct gcgcgcactt cggcgtgaaa ggtgtcgtgg tgcaggatgc
     8221 ggcactgctg gagtcggggg cggctatccg taccgcagaa ggcggcgcag agctcgttca
     8281 gtcgattact ggcgacaaca ttgttaacgt gctggatgat ttccgtcagg caggttacac
     8341 cgtagtgacc acttccagcg agcagggtaa accgctgttc aaaactagtc tgccagcgaa
     8401 aatggtactg gtgctgggtc aggaatatga agggttaccg gatgccgcac gcgatccgaa
     8461 cgatctgcgc gtgaagattg acggtacggg caacgttgcc gggctgaata tctctgtcgc
     8521 aaccggcgtt ttgcttggtg aatggtggcg tcagaataaa gcctgataaa tcagccgggt
     8581 ggcaactctg ccatccggca tttccccgca aatttactca ctctctgccg gtaatactgg
     8641 catccagtca atcggcgtct cgccacgttg ttccagccac tgatttgcca gcacaaaatg
     8701 gttgcagcca aagaatccac gatgcgccga aagcggcgac ggatgcggtg ctttcagtac
     8761 atgatggcgt tgcttatcta taatcgcccc tttcttttgc gcatgtgatc cccacaacaa
     8821 aaacaccacg ccttcgcggt gctggttaat caggctgatg actttatcag taaacgtctc
     8881 ccaaccgagg ctggcgtggg aatgcgcctg acctgcgcga accgtcaaca cagtattgag
     8941 cagcagaacg ccctgacgcg cccagctttc gagatagcca tgattagggc gggtgaagcc
     9001 cggaatagta ttttccagct ctttatacat attcaataat gacggaggaa tggcaatgcc
     9061 gggacgaacg gaaaatgcca gaccatgcgc ctgtcccggt ccgtgataag gatcctggcc
     9121 gagaatcacc actttaacgt cacccaactc ggtaaagcgg aacgcgttaa agacatcttt
     9181 ttgtggtgga tagatagtga cgccggactg ccgctcgctg gcgacggtct gaagggtatt
     9241 aagaaaataa ggttgttgct tctcttcagc cagcacgtca tgccaggtta attcgttagc
     9301 catctcgctc tcctgcgaat cttcaatccg cctagcttaa ctgcttcttt ctacagaaca
     9361 aaatcatgct cattttttag acttaaacga gtgcaaaaaa atgtaaattg gtaaaatttc
     9421 acacccgcat aagttgatgt aaaacaataa aatccattta cgaccacaat cgatgtgtgg
     9481 tttttattga tttaaatcaa agaatcaagg gtggttgagg agtatatata cactcaagca
     9541 acaatggttt taccaattag ccgcgacagg ctgaacaaat caaataattt tgccggggag
     9601 gcatcacatg attacaggta tccagattac taaagccgct aacgacgatc tgctgaactc
     9661 tttctggctg ctggacagcg aaaaaggcga agcacgttgc atcgttgcaa aagcaggtta
     9721 tgcagaagat gaagtggttg cagtaagcaa actgggtgac attgaatacc gtgaagttcc
     9781 agtagaagtg aaaccagaag ttcgcgttga aggtggtcaa cacctgaacg ttaacgttct
     9841 gcgtcgtgaa actctggaag atgcagttaa gcatccggaa aaatatccgc agctgaccat
     9901 ccgtgtatcc ggttatgcag ttcgctttaa ctctctgact ccggaacagc agcgcgacgt
     9961 tatcgctcgt acctttactg aaagcctgta aggcttaagt agcaagttac taagcggaag
    10021 agggcgacct cttccgcttt ttttcgttaa tagaaaatgc gtaccgcgca atagaccagc
    10081 aacagggcaa gcacgatatt taactggcga ccatactggc gaaacaatcg ctgaaacaga
    10141 tgccccgcca gcgcccagca cacattgcca aacgtcccaa tcatcgccag caaaacgctg
    10201 acgccaacta cccagcttag cgcctgtgtt tgcggcagaa caaacgtcga cagtgccgta
    10261 acaccgtaca aaatgatttt gacgttcaca aactgcaaag caaagctggc ccaaaagctg
    10321 attggttttg cctgaagtcc gtcttccttt gttgggctgg tggcgatttt ccacgccagc
    10381 cagacaatat atgccgcccc cgcccaactc aaaaggtgta ccgctgccgg gtcaatcact
    10441 gccagtgaaa atgaaatgcc cgcacacagt aacatcacaa tcaaaaatcc cagactcatc
    10501 cctgccagca cgcgggtact ttgacgaaat ccatgcgacg tagcagagct aagggcgaga
    10561 atattgttcg gtcttggcgt catagcggta atcagggtgt aagtccaaaa agcacttaaa
    10621 agggtcggtg tcacttgtta tctcctctgt tttggtagac agta
//
LOCUS       DAJVUK010000147        10575 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.147, whole genome shotgun sequence.
ACCESSION   DAJVUK010000147 DAJVUK010000000
VERSION     DAJVUK010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10575
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.147"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..116)
                     /gene="hokB"
                     /locus_tag="OQQ57_003429"
     CDS             complement(<1..116)
                     /gene="hokB"
                     /locus_tag="OQQ57_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokB"
                     /protein_id="HCS1958065.1"
                     /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDK"
     gene            515..2128
                     /gene="trg"
                     /locus_tag="OQQ57_003430"
                     /pseudo
     CDS             515..2128
                     /gene="trg"
                     /locus_tag="OQQ57_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
     gene            complement(2166..3088)
                     /locus_tag="OQQ57_003431"
                     /pseudo
     CDS             complement(2166..3088)
                     /locus_tag="OQQ57_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            3305..4648
                     /locus_tag="OQQ57_003432"
     CDS             3305..4648
                     /locus_tag="OQQ57_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCS1958066.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GGPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEYRLIADVVCFP
                     RCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
                     DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHLGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
     gene            4873..6528
                     /gene="opgD"
                     /locus_tag="OQQ57_003433"
                     /gene_synonym="mdoD"
     CDS             4873..6528
                     /gene="opgD"
                     /locus_tag="OQQ57_003433"
                     /gene_synonym="mdoD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein OpgD"
                     /protein_id="HCS1958067.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
     gene            6668..6892
                     /locus_tag="OQQ57_003434"
     CDS             6668..6892
                     /locus_tag="OQQ57_003434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HCS1958068.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGFDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKGV"
     gene            6955..7491
                     /gene="rimL"
                     /locus_tag="OQQ57_003435"
     CDS             6955..7491
                     /gene="rimL"
                     /locus_tag="OQQ57_003435"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HCS1958069.1"
                     /translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDS"
     gene            complement(7486..8466)
                     /locus_tag="OQQ57_003436"
                     /pseudo
     CDS             complement(7486..8466)
                     /locus_tag="OQQ57_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707644.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8590..9582
                     /gene="tehA"
                     /locus_tag="OQQ57_003437"
     CDS             8590..9582
                     /gene="tehA"
                     /locus_tag="OQQ57_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HCS1958070.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATMPGLYLPTVANNFISAMACGALG
                     YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
                     NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
                     GSENGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE"
     gene            9579..10172
                     /gene="tehB"
                     /locus_tag="OQQ57_003438"
     CDS             9579..10172
                     /gene="tehB"
                     /locus_tag="OQQ57_003438"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HCS1958071.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKLGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY
                     EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
     gene            10475..>10575
                     /locus_tag="OQQ57_003439"
     CDS             10475..>10575
                     /locus_tag="OQQ57_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HCS1958072.1"
                     /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSG"
BASE COUNT         2702 a         2465 c         2677 g         2731 t
ORIGIN      
        1 tccttatcac cgtcccggaa ccgcagttcg tagagcgttt gtcgggtcag gagtgtgaat
       61 gtcagaatcg taatgcagat aatgagcaga cacaccacca gagggttgtg cttcatagcc
      121 tttctccttg ccggatggcg ggtaagaggc taagatctga attgctaggt tcattcgttg
      181 gcctcggttg atagaaatat cggtcggggc cttcgtcttt ctgattcccg gttagcctga
      241 aaacagaaag tctcaggcac ccgcaggcat cctatgaggt ttccttaggg acgaaaataa
      301 tcacttcacg aaattgcgtg ctgttttcca gaatttttcg tcattcggat tagccagttt
      361 agccattcgt tactctcttc attccaatag cattaatttt ctctgcaata attgttgtaa
      421 aaatgtgacg caaagaggtt tttggtcata agtaattacc gtcaagtgcc gatgactttc
      481 tatcaggagt aaacctggac gagagacaac ggtaatgaat acaactccct cacagcgatt
      541 aggttttttg catcacatca ggctggttcc gttatttgcc tgcattcttg gcggtatctt
      601 agttctattc gcattaagtt ctgctctggc aggccgatcg cgatcagcgt gatgttactg
      661 cggagattga gattcggacc gggttagcga acagttcaga ttttttgcgt tcagcccgga
      721 tcaatatgat tcaggccggg gctgcgagtc gtattgcgga aatggaagca atgaagcgaa
      781 atattgcgca agccgaatcg gagattaaac agtcgcagca aggttatcgt gcttatcaga
      841 atcgaccggt gaaaacacct gctgatgaag ccctcgacac tgaattaaat caacgctttc
      901 aggcttatat cacgggtatg caacctatgt tgaaatatgc caaaaatggc atgtttgaag
      961 cgattatcaa tcatgaaagt gagcagatcc gaccgctgga taatgcttat accgatattt
     1021 tgaacaaagc cgttaagata cgtagcacca gagccaacca actggcggaa ctggcccatc
     1081 agcgcacccg cctgggtggg atgttcatga ttggcgcgtt tgtgcgtgcc ctggtcatga
     1141 cgctgataac atttatggtg ctacgtcgga tcgtcattcg tccactgcaa catgccgcac
     1201 aacggattga aaaaatcgcc agtggcgatc tgacgatgaa tgatgaatcg gcgggtcgta
     1261 atgaaatcgg tcgcttaagt cgtcatttac agcaaatgca gcattcactg gggatgacag
     1321 tagggactgt tcgacagggc gcggaagaga tttatcgtgg caccagcgaa atttcagctg
     1381 gcaatgcgga cctgtcatct cgcaccgaag aacaagcggc ggctatcgaa caaactgccg
     1441 ccagcatgga gcaactcact gcgacggtga aacagaatgc ggataacgcg catcatgcca
     1501 gcaaactggc gcaagaggct tctattaaag ccagcgatgg cgggcagacg gagtaaaaac
     1561 gatgggcgct atctccacga gttcgaagaa aatttctgag atcaccgccg tcatcaacag
     1621 tattgctttc cagacgaata ttctggcact gaatgctgcc gttgaagccg cgcgagcggg
     1681 tgagcaaggg cgtggatttg ccgttgtcgc cagcgaagta cggacactcg caagtcgcag
     1741 cgctcaggcg gcgaaagaga ttgaaggctt gatcagtgaa tcagtcaggt taattgacct
     1801 ggggtcggat gaggtggcaa cggccgggaa aaccatgagc actattgttg atgccgtcgc
     1861 gagtgtcaca catatcatgc aggaaatcgc cgccgcctcg gatgaacaaa gtagaggcat
     1921 aacgcaggtt agccaggcga tttctgaaat ggataaggtg acgcaacaga atgcttctct
     1981 ggtagaagag gcctcagcgg cggcggtgtc ccttgaagaa caggcggcac gattaactga
     2041 ggcggtggat gtattccgtc tgaacaaaca ttctgtgtcg gcagaacctc gcggagcggg
     2101 tgaaccagtt agtttcgcta cggtgtgaaa atgttcaagg agggatcgac agatcccttc
     2161 acctttcaga acggcattga ttttcgaata gcgttaatca tcaactggca accagaagag
     2221 aacatcgcat ctacgcgggt cagtattcca atcggttcgc ctgcaccatg tcccggaaca
     2281 ggctgggcca ccagcgtggc atgacgcagg tcgtctttta ccgcgccaga agggacaaac
     2341 cacacgtagt cgtattcaac cgtaagttga cgagatagcg aagcagacag cgtttcgata
     2401 caacccgaag gaattttaca tccctggctc tgtactaatg catctgaatg ctggcgtggc
     2461 gcagtgcctt ctggtgatac aacgaccggc catttcagca ctcggcttag cgttacgttc
     2521 tcctgaagta gcgggtgatt agggcggaca accagcttca gcgattcaag aaacagcagt
     2581 tcgtaattaa gcccggtcat cagttcagga tctgacatcc gaccaatgcc gatatcgatt
     2641 tccccggttt tcaaacccgc cagaatcata gggttactca ttgtcgcaac ttgcaaggtc
     2701 gtctcttttt gttgctgatg aaactgacct ataaccgaag gtaatatccc cagtgccgca
     2761 gtaggtagtg caccaatcct gacgacatca ttattaagac cttctttacg atgaagcgac
     2821 tgtccggcag tgttgatggc gtcaagaact ctgactgcat gcgttaaaaa ttgttcgccg
     2881 ggtaaggtaa gttgcgcccc ctgacgacca cgctcaaaca agcgagcgcc cgtcagctgc
     2941 tacagttcat tcaatgtctt agagagcgca ggttgactca aattaagggt ttcagccgcg
     3001 cccccaaagt tccttgttgt gcgacagcta cgaatgtatg aaggtggcgc aaacggatgc
     3061 gctgactaaa cagactattt ttttccataa gcgatgttaa aaacgaagcg gtgtcgctga
     3121 caagtgaagt tgtttgatta tgataacttg attgcaaaat ataattaaca attaaagcaa
     3181 ttgtgttaca gcaaaatgga taatattgat gttttcgcgg cgagatcaca gtttgtaaat
     3241 tcttcccgcc agagtgaatg cggttaccta cactccagat tactgaccac tggaggcaga
     3301 cactatggcg aacagcatca cggcggatga gattcgggaa cagttttcgc aggcaatgtc
     3361 agccatgtac cagcaagaag ttccgcagta cggcacgctg ctggaactgg tagctgatgt
     3421 gaatctggct gtgctggaaa acaatcctca actgcacgaa aaaatggtaa atgcagatga
     3481 gctggcgcga ctgaatgttg aacgtcatgg ggcgattcgc gttgggactg cacaagagct
     3541 tgctactctt cggcggatgt ttgccattat ggggatgtac ccggtgagct attacgatct
     3601 ctcgcaggca ggggggccgg tacattcgac agcatttcgg cccattgatg atgcttctct
     3661 ggcgcgtaat cccttccgcg tttttacctc cttactccgc cttgagctta tcgagaacga
     3721 aattttgcgc cagaaagcgg cggagattct gcgtcagcgc gatatcttca ccccacgttg
     3781 tcgacaactg ttagaggaat atgagcagca gggcggtttt aacgaaacac aggcacagga
     3841 atttgtgcaa gaggccctgg aaacgtttcg ctggcaccag tcagcaacgg tagatgaaga
     3901 aacctatcgc gccttgcaca acgaatatcg gttgattgct gatgtggtct gttttcctag
     3961 atgccatatc aaccacctga cgccacgtac gctggatatt gaccgggtgc agtcgatgat
     4021 gcctgaatgc ggaattgaac ccaaaattct catcgagggg ccgccgcgcc gcgaggtacc
     4081 gattttacta cgccagacca gctttaaagc actggaagag acggtgttgt ttgcggggca
     4141 gaaacagggc acgcataccg cgcgctttgg tgaaattgag cagcgtggcg tggcattaac
     4201 gccgaaaggg cgacaactgt atgatgatct tctgcgtaac gctggaaccg ggcaggataa
     4261 tctcactcac caaatgcatt tacaggaaac cttccgcact tttcctgaca gtgagttttt
     4321 aatgcgtcag caagggttgg catggttccg gtaccgtctg acgccttcgg gtgaggcgca
     4381 tcgtcaggcg attcatcttg gagatgatcc acagccttta attgaacgtg gttgggtagt
     4441 ggcgcaaccc atcacctatg aagatttctt gcccgttagc gcggcgggga tcttccagtc
     4501 aaatctgggt aatgaaacgc agacacgcag tcacggtaat gccagtcgcg aagcatttga
     4561 gcaggcgttg ggttgtccgg ttttggatga gttccagctt taccaggaag cggaagaacg
     4621 cagtaaacgt cgctgtggtt tgctttaaat tctgaccatc cgcctttgca aaaatttgcc
     4681 tgattttaca aacgaatcag gctcatccca tcgacataaa aaaaatgccg atttatgcat
     4741 attctctcag ttcaacaatt ggattattaa taaatattgt ctagagtgag cggtcataaa
     4801 taagcacttt cttgccgctg aaaacgacca gcgcgggacc attcacaaca ccagaaggac
     4861 tcactttcag gtatggatcg tagacgattt attaaaggtt caatggctat ggccgccgtg
     4921 tgcggtacca gcggcattgc ttctcttttt tctcaggcgg cattcgcggc agattctgat
     4981 attgccgacg ggcaaaccca gcgttttgac ttctccattc tacagtcaat ggcgcacgac
     5041 ttagcgcaaa cagcgtggcg tggtgcgcct cgtccgttac ctgacacgct ggcgacaatg
     5101 acgccgcagg cttataacag tattcaatac gacgccgaaa aatcgctctg gcataacgtt
     5161 gagaaccgtc aactggacgc tcagttcttc catatgggaa tgggattccg tcgccgcgtt
     5221 cgtatgtttt ctgtagatcc agcaacacat ctggcgcgtg aaattcactt tcgcccggag
     5281 ttgttcaaat acaacgatgc gggtgttgat acaaaacaat tagaagggca aagcgatctc
     5341 ggctttgccg gttttcgcgt gtttaaagcc cccgaactgg cgcgccgtga tgtagtatca
     5401 tttctcggcg cgagttattt ccgcgccgtt gatgatacat atcaatacgg tttgtcggcc
     5461 cgcggcctgg cgatcgacac ttacaccgac agtaaagaag agttccccga ctttaccgcc
     5521 ttctggtttg atacggtaaa accgggggca actaccttta ccgtttatgc gttgctcgat
     5581 agcgccagca ttactggtgc ctataagttc actatccatt gtgagaaaag tcaggtgatt
     5641 atggatgtgg aaaatcacct gtatgcgcgc aaagacatta aacagctggg cattgcgccg
     5701 atgaccagta tgttcagctg cggtactaat gaacgtcgga tgtgcgatac aattcatccg
     5761 caaattcatg actctgatcg tctgtccatg tggcggggca acggcgagtg gatttgccgt
     5821 ccgctgaata atccgcaaaa attgcagttc aatgcttaca ccgacaacaa cccgaaaggg
     5881 tttggtttat tgcaactgga tcgtgacttc tcccattatc aggacattat gggctggtat
     5941 aacaaacgcc caagtctgtg ggtggaaccg cgtaacaagt ggggtaaggg caccatcggc
     6001 ctgatggaaa tcccaacaac gggcgaaacg ctggataaca ttgtctgttt ctggcagcca
     6061 gaaaaagctg taaaagcagg tgatgagttt gcattccagt atcgtctgta ctggagtgcg
     6121 caaccgcctg ttcattgccc attagcgcgc gttatggcga cgcgtaccgg catgggcggt
     6181 ttcccggaag gttgggcgcc aggtgaacac tatcccgaaa aatgggcgcg tcgttttgcc
     6241 gtcgatttcg ttggtggtga tctgaaagct gccgcgccaa aaggcattga gccggtgatt
     6301 acgctttcca gtggggaagc gaagcaaatc gaaattctct atattgaacc catcgatggt
     6361 tatcgtattc agtttgactg gtatccgact tcggactcca ctgatccggt cgatatgcgg
     6421 atgtatctac gttgtcaggg ggacgctatc agtgaaacat ggctgtatca gtatttcccg
     6481 ccagcgccgg ataaacgtca gtatgttgac gaccgcgtga tgagttaatc gttttttctt
     6541 cggcaccttc ttcgggaggt gccgtctggt taaacacgat cccgctcgca tttttcccta
     6601 agttaaatga gtaatctgat ggtgtgtatt tcagatacac cttgtcagcc actaacaggg
     6661 agtgcgtatg tttccagaat accgagattt aatatcccgt ctgaaaaacg aaaatcctcg
     6721 ctttatgtcc ttgttcgata aacacaataa acttgatcat gaaattgcca gaaaggaagg
     6781 tttcgacggt cgagggtaca atgcggaagt ggtccgcatg aaaaaacaaa agctacagtt
     6841 aaaagatgag atgctcaaaa tcctgcagca ggagagcgtc aaaggggtgt aaactttcct
     6901 aagccgccag ccaggcggct tttttaacaa cagcatggat tgactggaga taagatgact
     6961 gaaacgataa aagtaagcga atcacttgaa ttacatgctg ttgcggaaag tcacgtcaca
     7021 cctctttatc agttaatctg taaaaataaa acctggttac agcagtcgct aaactggccg
     7081 cagttcgttc agagtgaaga ggacacgcga aaaacggtgc agggtaatgt gatgttgcat
     7141 caacgcggct atgccaaaat gttcatgatt ttcaaagaag atgaacttat cggcgttatc
     7201 tcgtttaatc gtattgaacc actgaataaa actgctgaaa tcggctactg gctggacgaa
     7261 tctcatcagg ggcaggggat catttctcag gcgctgcagg cattgattca tcattacgct
     7321 cagtctggtg aacttagacg cttcgtgatc aaatgtcggg tggacaatcc gcaaagcaac
     7381 caggtcgctt tgcgcaatgg ttttatcctt gaaggttgcc tgaaacaggc tgagttcctg
     7441 aatgatgcct atgatgatgt gaacttatac gcgcgtatta tcgattcata ataaccctgc
     7501 cagcggcgtt cgcgtaatgc gctcctcgcc gttaatgact tttggaccac ggacatgaac
     7561 cgtgtcgcca tcaaaggctt caacgacggc gtggtcggtt aactccacat ggttttcaat
     7621 tatcaccgca cctgaaatac ggctctcacc ttgtattaca acgtgctcgt cgagcagaat
     7681 cggttcacca cgtaccacgg catttccgcc aatcaagaca tgatgtttta acacacaatt
     7741 accttccaca atggcatatt ccgccacctg cgaactgtaa tgaatcgtcg gaatggcatc
     7801 ttcttctatg ccagctttca cctgcgcgtg accgtagact ttagcgcaat cgcatagcca
     7861 gacgttgttc tcttcattac cttcaacact ggcaaaatca aaaacttcgg cgcgatgttc
     7921 aataaaagca taccggacga cggcatcgcc ataaatttgt gcctggtgga caatacgcga
     7981 ggcgctaacc cttgcgcgat cataaatttg gagcaggagt tgatggtcgg gcgttaagcc
     8041 ttgtgcggcg acgatcatag aatgttgatc aattaaggcg tgaccaaata ttctacattg
     8101 cccgtaaact aatgagtcat gaatggtgac actgtcactt atatatgcac cctgactgat
     8161 ttcactatta tcgatccaga cgttatccgt tgcgtaaacc tctccccaca gcacgctggt
     8221 gccggtgata cgcgtattac cagaaatcac cgttccgccg aacgcaatag cattctggtc
     8281 gtaaatccag caatttcctt cctatgctaa caccgtttcg cgatcgatcc agccgccagc
     8341 ggttcctgct atcacatcgt taaaatcgct aatggcgata atctgccgta ataacacact
     8401 ttttttagtg ccatcttcct gataactaaa ggctcgctgt tcttcactta gacgatattt
     8461 gcgcatagcg ttttctcaca ggtgacttac tatgaccgta gcaaattctg cggctctggc
     8521 tatgctcgag aaaattccat aaaatgcatt tcaaatatac tttataaatt aaacaaaatg
     8581 agtaagaaga tgcagagcga taaagtgctc aatttgccgg caggctactt tggtattgtg
     8641 ttggggacga tagggatggg atttgcctgg cgctatgcca gccaggtttg gcaggtcagc
     8701 cactggttag gggatgggct ggtgattctg gcgatgatca tctggggatt attaactagc
     8761 gcatttatta cccgactcat acgctttccg catagcgtgc tggcggaagt tcgccatcca
     8821 gtgctgagca gttttgtgag tttgtttccg gcaacgacga tgctggtggc gattggtttt
     8881 gttccgtggt ttcgcccact ggcggtgtgc ctgttcagtt ttggtgtcgt ggttcagttg
     8941 gcttatgccg cctggcaaac tgcgggatta tggcgcggat ctcaccctga agaagctacc
     9001 atgcctggac tgtatctgcc gacagttgcc aacaacttta tcagcgcaat ggcctgtggt
     9061 gcgttgggct acaccgacgc cggtctggtg tttttaggcg caggcgtttt ctcatggcta
     9121 agccttgaac cggtgatctt gcagcgtctg cgcagttcgg gagaattacc cacggcactg
     9181 cggacatcac tcggcattca gctcgctcct gcgctggtgg cctgtagtgc ctggttgagc
     9241 gtcaacggcg gcgagggtga tacgctggcg aaaatgcttt ttggttatgg actgctgcaa
     9301 ctgctgttta tgctacgtct gatgccatgg tatctctccc agccatttaa tgcttcattc
     9361 tggagtttct cgttcggcgt atctgcactg gcaaccaccg gtttgcatct ggggagtggc
     9421 agcgaaaatg gatttttcca tacgctggcg gtaccgctgt ttatctttac caattttatt
     9481 attgcaatac tgctcatccg tacttttgcg cttctgatgc agggaaaatt gttagtcaga
     9541 accgagcgcg ctgttttaat gaaagcagag gacaaagaat gatcattcgt gacgaaaact
     9601 attttactga taaatatgaa ttaacccgca cacactctga agtactggaa gcggtgaaag
     9661 tggttaaacc gggtaaaacg ctggatctgg gctgtggcaa tggtcgtaac agtctttacc
     9721 tggcagccaa tggttatgat gttgacgcat gggataaaaa tgccatgagt atcgccaatg
     9781 tagagcgcat taaatccatt gaaaatctgg ataatttaca cacccgagtc gttgatctga
     9841 ataacctcac atttgataga cagtacgatt ttattctttc gactgtggta ctgatgttcc
     9901 ttgaggctaa aaccatccca gggctgattg ccaatatgca acgttgcact aaacttggtg
     9961 gttacaacct gattgtggcg gcgatggata ccgctgatta tccatgtacc gtcggcttcc
    10021 cgtttgcctt caaagaggga gaattacgtc gatattacga aggctgggag agggtgaaat
    10081 acaatgaaga cgtcggcgag ctgcaccgca ccgacgccaa cggtaatcgt attaaactgc
    10141 gtttcgccac gatgctggca cgtaaaaaat gacccgctaa gaataaggcg cgtgaaaatt
    10201 ccccacgctg agatgattta ctgttcttct tttcggtaag catatttttt atcgaaggga
    10261 tgtgaaatta atcacagtag tcgaagtttt ttagcagctt aacttactga aatttaacta
    10321 ctgatgattg acttagcccc tttttcggca ttgactatgt cgtctgaaaa ggggctgaaa
    10381 aatttatttt caccaacact ttttttgcca caacacgaag cggcgctttt tgctataact
    10441 taaaaagtaa tataatcatc tcaggaaact attcatgcgt accacatcat ttgcgaaagt
    10501 tgcagcttta tgcggcttgt tggctctgtc tggttgtgcc tctaaaatca cccagccaga
    10561 taaatattct ggttt
//
LOCUS       DAJVUK010000148        10463 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.148, whole genome shotgun sequence.
ACCESSION   DAJVUK010000148 DAJVUK010000000
VERSION     DAJVUK010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10463
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.148"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(28..1925)
                     /gene="espL1"
                     /locus_tag="OQQ57_003440"
                     /pseudo
     CDS             complement(28..1925)
                     /gene="espL1"
                     /locus_tag="OQQ57_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector EspL1"
     gene            2447..4375
                     /gene="thrS"
                     /locus_tag="OQQ57_003441"
     CDS             2447..4375
                     /gene="thrS"
                     /locus_tag="OQQ57_003441"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HCS1958073.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            4379..4921
                     /gene="infC"
                     /locus_tag="OQQ57_003442"
     CDS             4379..4921
                     /gene="infC"
                     /locus_tag="OQQ57_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HCS1958074.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQRVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            5018..5215
                     /gene="rpmI"
                     /locus_tag="OQQ57_003443"
     CDS             5018..5215
                     /gene="rpmI"
                     /locus_tag="OQQ57_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HCS1958075.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            5268..5624
                     /gene="rplT"
                     /locus_tag="OQQ57_003444"
     CDS             5268..5624
                     /gene="rplT"
                     /locus_tag="OQQ57_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HCS1958076.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     misc_feature    5741..5865
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            5747..5791
                     /gene="pheM"
                     /locus_tag="OQQ57_003445"
     CDS             5747..5791
                     /gene="pheM"
                     /locus_tag="OQQ57_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheST operon leader peptide PheM"
                     /protein_id="HCS1958077.1"
                     /translation="MNAAIFRFFFYFST"
     gene            6074..7057
                     /gene="pheS"
                     /locus_tag="OQQ57_003446"
     CDS             6074..7057
                     /gene="pheS"
                     /locus_tag="OQQ57_003446"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HCS1958078.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     gene            7072..9459
                     /gene="pheT"
                     /locus_tag="OQQ57_003447"
     CDS             7072..9459
                     /gene="pheT"
                     /locus_tag="OQQ57_003447"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HCS1958079.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITNEATLPKRATITLRRSKLDCLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            9464..9763
                     /gene="ihfA"
                     /locus_tag="OQQ57_003448"
     CDS             9464..9763
                     /gene="ihfA"
                     /locus_tag="OQQ57_003448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HCS1958080.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            complement(10067..10207)
                     /locus_tag="OQQ57_003449"
     CDS             complement(10067..10207)
                     /locus_tag="OQQ57_003449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HCS1958081.1"
                     /translation="MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
BASE COUNT         2750 a         2366 c         2668 g         2679 t
ORIGIN      
        1 taagttggca gcattaccaa tagttggtta taaatacgtc tttagttcat cagcactaaa
       61 actcaggctt tggctgatta catttatagc agcataatat gtttctacag ttttataatg
      121 attatgatga atggctatat gaacagctga catgttgtca tgatttttag cggccaacag
      181 tgtgaataac tgacgttgac taaaagaata tttttttgca aaaatattca gcgtcgatat
      241 ataagataac acgacgtctt cattaccctt gctcatggcg atgtataata caggggttcc
      301 atgtgctgta gcgcctttta ataaatccat gatgttagct ttgctcaact tgtatttaaa
      361 ggcgatgcca ttaattttag agaggaaccg tgtgacacac aaagggtgat tattttccat
      421 tgcagcaaac aaccctagtt caccatcacg tgttttcatt gctaaaatat ccatcactat
      481 ttttttgttt aaaagctctt gtgctattgg agtggttaat gcattcagaa agatatcgat
      541 tgtttcatcg aacccataca acatggagat atagagccca ggtgtttcgt tagcactttt
      601 agtttgcagt aatttaacca gattatcttc atgaatgata tgattgtata tcagtgactg
      661 aatttcttgc ataaatattt ttacgttgtc agtatgtccg ttcatcatag ccagaaataa
      721 agcaggtgta ccaacgctat tctgcgcagt tattatttca atgatttctt tttcagggag
      781 tatgggcaac tgtttgaata atgtaataag ctgttgagtc tggcctgtgg ccattattaa
      841 caacattgcc gatggatgta taggggcaaa tggcattcgt gatgcaatac ccgcgaaaat
      901 agcccctgga actcccacag gtaatagggg cagaatagca attgcacagt tgcgaacata
      961 cctatcagcc caggtctgag catcgggacc tgaactgatg aacttatcaa gcgaaagaaa
     1021 gccccgtgct gtcctgtggg tgcctctgac ggcaacgttg gtatcgttcg ggtcgtagac
     1081 ggacactaca tagtttaatt gtccatacac taactgcttt attcgtagcc ttactgacaa
     1141 agtatgattg tctatatata aaatcgcgga catatgactg acattgtttg ccatcattcg
     1201 acaaaagaaa atatctaaag cgaagccaaa atccttactc gcgataacgc gactccctgc
     1261 aggaggatgg cgaagtaatg ctctgaactc cgcatcccgg actaagggga catgctgctg
     1321 tatggattca acggaggagt aatgtttaat caggttgact ttgccttttc catttctcaa
     1381 tgaatcaagg gcgtattgca atgacagatg gcgacaaaaa atagcgtcag aaggagattg
     1441 caaaaaacat gcactaccat tgagatttac tgttggttgt atagtttttt ctctatggat
     1501 ttttttagac agtttcatac aatggttacg atcttcggca gttaactgtt cctgctcaat
     1561 ataatccagt atgcttcgca aatggttagc cttaataggc gtggtttcca gaaataaggg
     1621 aatgatttct tttttatagt gtaatgtaat aagtatattt tctgcatgga tgggtgaagt
     1681 ggcaaagtta atgataaaaa gggcagtgga gtaacaattt gtgatatttt tcgacagttt
     1741 gcggtaaatt cctgagtaat acagtatgac agcatcgaac ttaagtcaga ggtatcaagt
     1801 agggtgatga gttggcgcgc aaattgatta ataagctctg atgaaggcgt tggtatgtcg
     1861 ctatcgatgt gcaatctatg aggagactta taatgagttc tgataatgat atcgttttga
     1921 ctcataatct attcacctta tatatactgg aggttttgag gatgatgatt aattattatc
     1981 gccagaacga aatgtgcacg aaaaattgct ataagaattg tgtcactttt atcattgtga
     2041 tatgaccact tcgtcattaa tctcatgatc gtttaaatac taccgccaaa tcacgcaacg
     2101 aactttgctg gattcagttt atgttgctgt aaatccgctc gcagtaaacc tttcagacgc
     2161 accgtgatgt tatcagtggt tctttaagcg ttttgctggt gtactcacta caaacgaatt
     2221 gcgaatcgaa tcaatgtgaa acggaaaggt acaatctccc tttttttagt gttaacatcg
     2281 ttcaaccggg tggaaggtga gaggttaatg tctttcattt gtgtacctga ttgcgaacca
     2341 atttagcatt tgttggctag atggtttcgc aatgaactgt taataaacaa atttttcttt
     2401 gtatgtgatc tttcgtgtgg gtcaccactg caaataagga tataaaatgc ctgttataac
     2461 tcttcctgat ggcagccaac gccattacga ccacgctgta agccccatgg atgttgcgct
     2521 ggacattggt ccaggtctgg cgaaagcctg tatcgcaggg cgcgttaatg gcgaactggt
     2581 tgatgcttgc gatctgattg aaaacgacgc acaactgtcg atcattaccg ccaaagacga
     2641 agaaggtctg gagatcattc gtcactcctg tgcgcacctg ttagggcatg cgattaaaca
     2701 actttggccg cataccaaaa tggcaatcgg cccggttatt gacaacggtt tttattacga
     2761 cgttgatctt gaccgcacgt taacccagga agatgtcgaa gcactcgaga agcggatgca
     2821 tgagcttgct gagaaaaact acgacgtcat taagaagaaa gtcagctggc acgcagcgcg
     2881 tgaaactttc gccaaccgtg gggagagcta caaagtctcc attcttgacg aaaacatcgc
     2941 ccatgatgac aagccaggtc tgtacttcca tgaagaatat gtcgatatgt gccgcggtcc
     3001 gcacgtaccg aacatgcgtt tctgccatca tttcaaacta atgaaaacgg caggggctta
     3061 ctggcgtggc gacagcaaca acaaaatgtt gcaacgtatt tacggtacgg cgtgggcaga
     3121 caaaaaagca cttaacgctt acctgcagcg cctggaagaa gccgcgaaac gcgaccaccg
     3181 taaaatcggt aaacagctcg acctgtacca tatgcaggaa gaagcgccgg gtatggtatt
     3241 ctggcacaac gacggctgga ccatcttccg tgaactggaa gtgtttgttc gttctaaact
     3301 gaaagagtac cagtatcagg aagttaaagg tccgttcatg atggaccgtg tcctgtggga
     3361 aaaaaccggt cactgggaca actacaaaga tgcaatgttc accacatctt ctgagaaccg
     3421 tgaatactgc attaagccga tgaactgccc gggtcacgta caaattttca accaggggct
     3481 gaagtcttat cgcgatctgc cgctgcgtat ggccgagttt ggtagctgcc accgtaacga
     3541 gccgtcaggt tcgctgcatg gcctgatgcg cgtgcgtgga tttacccaag atgacgcgca
     3601 tatcttctgt actgaagaac aaattcgcga tgaagttaac ggatgtatcc gtttagtcta
     3661 tgatatgtac agcacttttg gcttcgagaa gatcgtcgtc aaactctcca ctcgtcctga
     3721 aaaacgtatt ggcagcgacg aaatgtggga tcgtgctgag gcggacctgg cggttgcgct
     3781 ggaagaaaac aacatcccgt ttgaatatca actgggtgaa ggcgctttct acggtccgaa
     3841 aattgaattt accctgtatg actgcctcga tcgtgcatgg cagtgcggta cagtacagct
     3901 ggacttctcc ttgccgtctc gtctgagcgc ctcctatgtg ggcgaagaca acgagcgtaa
     3961 ggtaccggta atgattcacc gcgcaattct ggggtcgatg gaacgtttca tcggtatcct
     4021 gaccgaagaa ttcgctggtt tcttcccgac ctggcttgcg ccagttcagg ttgttatcat
     4081 gaatattacc gattcacagt ctgaatacgt taacgaattg acgcaaaaac tatcaaatgc
     4141 gggcattcgt gttaaagcag acttgagaaa tgagaagatt ggctttaaaa tccgcgagca
     4201 cactttgcgt cgcgtcccat atatgctggt ctgtggtgat aaagaggtgg aatcaggcaa
     4261 agttgccgtt cgcacccgcc gtggtaaaga cctgggaagc atggacgtaa atgaagtgat
     4321 cgagaagttg caacaagaga ttcgcagccg cagtcttaaa caattggagg aataaggtat
     4381 taaaggcgga aaacgagttc aaacggcgcg ccctaaccgt atcaatggcg aaattcgcgc
     4441 ccaggaagtt cgcttaacag gtctggaagg cgagcagctt ggtattgtga gtctgagaga
     4501 agctctggag aaagcagaag aagccggagt agacttagtc gagatcagcc ctaacgccga
     4561 gccgccggtt tgtcgtataa tggattacgg caaattcctc tatgaaaaga gcaagtcttc
     4621 taaggaacag aagaaaaagc aaagagttat ccaggttaag gaaattaaat tccgtcctgg
     4681 tacagatgaa ggcgactatc aggtaaaact ccgcagcctg attcgctttc tcgaagaggg
     4741 tgataaagcc aaaatcacgc tgcgtttccg cggtcgtgag atggcgcacc agcaaatcgg
     4801 tatggaagtg cttaatcgcg tgaaagacga tttgcaagaa ctggcagtgg tcgaatcctt
     4861 cccaacgaag atcgaaggcc gccagatgat catggtgctc gctcctaaga agaaacagta
     4921 aggccttcaa gtagcactgt ctgtggagcc ttcgggcttc acaggctttg ttcgcctttg
     4981 tttcgtttat taacaatgcg aagtggaagt tattaaaatg ccaaaaatta agaccgtacg
     5041 cggtgctgct aagcgcttca aaaaaaccgg taaaggtggt tttaagcaca agcacgctaa
     5101 cctgcgtcac attctgacca aaaaagcgac caaacgtaaa cgtcacctgc gtccgaaagc
     5161 catggtttcc aaaggcgatc tgggcctggt aatcgcgtgc ctgccgtacg cataagccgt
     5221 taacgttttt aactttttaa ttagaatata gatacaggag agcacatatg gctcgcgtaa
     5281 aacgtggtgt tattgcacgc gcacgtcaca agaaaatttt gaaacaagct aaaggctact
     5341 acggtgcgcg ttctcgcgta taccgcgttg ccttccaggc tgttatcaaa gctggtcagt
     5401 atgcttaccg tgaccgtcgt caacgtaagc gtcagttccg tcaactgtgg attgcacgta
     5461 tcaacgcagc agcacgtcag aacggtattt cttacagcaa attcatcaat ggcctgaaaa
     5521 aagcctctgt tgaaatcgac cgtaagatcc tggctgatat cgcagtattc gacaaagtag
     5581 cgttcaccgc tctggttgaa aaagcgaaag cagctctggc ataagccagt tgaaagaggg
     5641 agctagtctc cctcttttcg tttcaacgcc atcaaaacat tgacttttat cgccgtagcc
     5701 ttttcaataa aggtcttttg aagagtacca aaaggtaacg caagcaatga atgctgctat
     5761 tttccgcttc tttttttact ttagcacctg aatccaggag gctagcgcgt gagaagagaa
     5821 acggaaaaca gcgcctgaaa gcctcccagt ggaggctttt tttgtatgcg cgttttgaaa
     5881 aataaaaagc cagtctatca ggcgtaattg tcgcagccag tctggatacg gccagcgcgg
     5941 agaaaccgga gcgtatttaa gtacgtgaga atttcgagca ctgcccggga ccaaaatggc
     6001 aagtaaaata gcctgatggg ataggctcta agtccaacga accagtgtca ccactgacac
     6061 aatgaggaaa accatgtcac atctcgcaga actggttgcc agtgcgaagg cggccattag
     6121 ccaggcgtca gatgttgccg cgttagataa tgtgcgcgtc gaatatttgg gtaaaaaagg
     6181 gcacttaacc cttcagatga cgaccctgcg tgagctgccg ccagaagagc gtccggcagc
     6241 tggtgcggtt atcaacgaag cgaaagagca ggttcagcag gcgctgaatg cgcgtaaagc
     6301 ggaactggaa agcgcagcgc tgaatgcgcg tctggcggcg gaaacgattg atgtctccct
     6361 gccaggtcgt cgcattgaaa acggcggtct gcatccggtt acccgtacca tcgaccgtat
     6421 cgaaagtttc ttcggtgagc ttggctttac cgtggcaacc gggccggaaa tcgaagacga
     6481 ttatcataac ttcgatgctc tgaacattcc tggtcaccac ccggcgcgcg ctgaccacga
     6541 cactttctgg tttgacacta cccgcctgct gcgtacccag acctctggcg tacagatccg
     6601 caccatgaaa gcccagcagc caccgattcg tatcatcgcg cctggccgcg tttatcgtaa
     6661 cgactacgac cagactcaca cgccgatgtt ccatcagatg gaaggtctga ttgttgatac
     6721 caacatcagc tttaccaacc tgaaaggcac tctgcacgat ttcctgcgta acttctttga
     6781 ggaagatttg cagattcgct tccgtccttc ctacttcccg ttcaccgagc cttctgcaga
     6841 agttgacgtc atgggtaaaa acggtaaatg gctggaagtg ctgggttgcg ggatggtgca
     6901 tccgaacgtg ctgcgtaacg ttggcatcga cccggaagtt tactctggtt tcgccttcgg
     6961 gatggggatg gagcgtctga ctatgttgcg ttacggcgtc accgacctgc gttcattctt
     7021 cgaaaacgat ctgcgtttcc tcaaacagtt taaataaggc aggaatagat tatgaaattc
     7081 agtgaactgt ggttacgcga atgggtgaac ccggcgattg atagcgatgc gctggcgaat
     7141 caaatcacta tggcgggcct ggaagttgac ggtgtagaac cggttgccgg tagcttccac
     7201 ggcgtggtcg ttggtgaagt ggttgagtgt gcgcagcatc cgaacgctga caaactgcgt
     7261 gtgacaaaag tgaatgtcgg cggcgatcgc ctgctggaca tcgtctgtgg tgcgccaaac
     7321 tgccgtcagg gcctgcgtgt ggcggtagct accattggtg ctgttctgcc gggtgatttc
     7381 aaaattaaag cggcgaaact gcgtggcgaa ccgtctgaag ggatgctgtg ctccttctct
     7441 gaactgggaa tttctgacga tcacagcggc attatcgaac tgcctgcaga tgcgccgatt
     7501 ggcactgaca tccgcgaata cctgaaactc gatgacaaca ccatcgaaat cagcgtaacg
     7561 ccaaaccgtg ccgactgctt aggtatcatt ggtgttgcgc gtgacgttgc cgtgctgaat
     7621 cagctgccgc tggttgaacc ggaaatcgtt ccggttggtg cgaccatcga cgacacgttg
     7681 ccgattacag tcgaagcgcc tgaagcctgc ccgcgctatc ttggccgtgt ggtaaaaggc
     7741 attaacgtta aagcgccaac tccgctgtgg atgaaagaaa aactgcgtcg ttgcgggatc
     7801 cgttctatcg atgcagttgt tgatgtcacc aactatgtac tgctcgaact gggccagccg
     7861 atgcacgctt tcgataaaga tcgcattgaa ggcggcattg tggtgcggat ggcaaaagag
     7921 ggcgaaacgc tggtgctgct tgatggcact gaagcgaagc tgaatgctga cactctggtc
     7981 atcgccgacc acaacaaggc gctggcgatg ggcggcatct ttggtggcga acactctggc
     8041 gtgaatgacg aaacgcaaaa cgtcttgctg gaatgcgctt tcttcagccc gctgtctatc
     8101 accggtcgtg ctcgtcgtca tggcctgcat actgatgcgt ctcaccgtta tgagcgtggc
     8161 gttgatccgg cactgcagca caaagcgatg gaacgtgcga cccgtctgct gatcgacatc
     8221 tgcggtggtg aggctggtcc ggtaattgat atcaccaacg aagcaacgct gccgaagcgt
     8281 gcaaccatca ctttacgtcg tagcaaactg gattgcctga tcggccatca tattgctgat
     8341 gaacaggtaa ctgacattct gcgtcgtctc ggctgcgaag tgaccgaagg caaagacgag
     8401 tggcaggcag ttgcgccgag ctggcgtttc gatatggaga ttgaagaaga tctggtcgaa
     8461 gaagtcgcgc gtgtttacgg ctacaacaac atcccggatg agccggtaca ggcaagcctg
     8521 attatgggta ctcaccgtga agctgacctg tcgctcaagc gcgtgaaaac gctgctcaac
     8581 gacaaaggct atcaggaagt gatcacctac agcttcgttg atccgaaagt gcagcagatg
     8641 atccatccag gcgttgaagc cttactgctg ccaagcccga tctctgttga aatgtcagca
     8701 atgcgtcttt ctctgtggac cggcctgctg gcaaccgtgg tgtacaacca gaaccgtcag
     8761 cagaaccgtg tgcgcatttt cgaaagcggt ctgcgtttcg taccagatac tcaggcaccg
     8821 ttgggcattc gtcaggatct gatgttagcc ggtgtgattt gcggtaaccg ttacgaagag
     8881 cactggaacc tggcaaaaga gaccgttgat ttctatgatt tgaaaggcga tcttgaatcc
     8941 gttctcgacc tgaccggtaa actgaatgag gttgagttcc gtgcagaagc gaatccggca
     9001 ctgcatccgg ggcaatccgc agcgatttat ctgaaagggg aacgtattgg ttttgttgga
     9061 gttgttcatc ctgaactgga acgtaaactg gatcttaacg gtcgcactct ggtgttcgaa
     9121 ctggagtgga acaagctcgc agaccgcgtg gtgcctcagg cgcgcgagat ttctcgcttc
     9181 ccggcgaacc gtcgtgacat cgcggtggtg gtcgcagaaa acgttcccgc agcggatatt
     9241 ttatccgaat gtaagaaagt tggcgtaaat caggtagttg gcgtaaactt atttgacgtg
     9301 taccgcggta agggtgttgc ggaggggtat aagagcctcg ccataagcct gatcctgcaa
     9361 gataccagcc gtacactcga agaagaggag attgccgcta ccgtcgccaa atgtgtagag
     9421 gcattaaaag agcgattcca ggcatcattg agggattgaa cctatggcgc ttacaaaagc
     9481 tgaaatgtca gaatatctgt ttgataagct tgggcttagc aagcgggatg ccaaagaact
     9541 ggttgaactg tttttcgaag agatccgtcg cgctctggaa aacggcgaac aggtgaaact
     9601 ctctggtttt ggtaacttcg atctgcgtga taagaatcaa cgcccgggac gtaacccgaa
     9661 aacgggcgag gatattccca ttacagcacg gcgcgtggtg accttcagac ccgggcagaa
     9721 gttaaaaagc cgggtcgaaa acgcttcgcc caaagacgag taatctgatc taactaaaaa
     9781 ggccgctctg cggccttttt tctttcaata actaattgat ttataatgtt ttatatctct
     9841 tcgttccacg atgcgtccac atttagtggg gggaggggag taagcccgct acattgtggg
     9901 ctttgtctta tagtctgatc actgtttcaa gtcggtgagg acaccaaaaa gaacccccgc
     9961 agtttttacg ctgcgggttt gttgttcatg tctgtgagat agggtgcctt atcgacctta
    10021 ccctggcaac cgattgacgg gggattgctc ccccgtcgcg gtttccttac tgcttacact
    10081 gtaagaacgc cgcaaactcc gctccccaga agctcatccg tatttcgcac agcgaaccgt
    10141 gcagcatcca gatgatgagg attgccgtca cgcagaacgt gatggccgta agcgattttt
    10201 gcgacatagc gcttgctcct ttttcgggga ggcgctaacc tatcacttgc ttagggtaga
    10261 cggttagggc ctcggttaaa caaaaatgtt ttccggggcc tttccacatc tggccttcag
    10321 gtattccctc cgaccatcag ccgaaaggca cccgcgcgta atctatcgct tttttgttac
    10381 tccggcaatt ctgctcgtta attctgaggt aagggcaaac tcatctgatt gtttcctctg
    10441 tgtgaagttg gcagttcatg cca
//
LOCUS       DAJVUK010000149        10408 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.149, whole genome shotgun sequence.
ACCESSION   DAJVUK010000149 DAJVUK010000000
VERSION     DAJVUK010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10408
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.149"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(498..860)
                     /locus_tag="OQQ57_003450"
     CDS             complement(498..860)
                     /locus_tag="OQQ57_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HCS1958082.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
                     LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
                     LGREMGLQEMTGFSKTAF"
     gene            1145..1354
                     /locus_tag="OQQ57_003451"
     CDS             1145..1354
                     /locus_tag="OQQ57_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958083.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
     gene            complement(1366..1953)
                     /gene="mtlR"
                     /locus_tag="OQQ57_003452"
     CDS             complement(1366..1953)
                     /gene="mtlR"
                     /locus_tag="OQQ57_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol operon repressor MtlR"
                     /protein_id="HCS1958084.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
     gene            complement(1953..3101)
                     /gene="mtlD"
                     /locus_tag="OQQ57_003453"
     CDS             complement(1953..3101)
                     /gene="mtlD"
                     /locus_tag="OQQ57_003453"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCS1958085.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
                     LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPSMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHF
                     RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
     gene            complement(3331..5232)
                     /gene="mtlA"
                     /locus_tag="OQQ57_003454"
     CDS             complement(3331..5232)
                     /gene="mtlA"
                     /locus_tag="OQQ57_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HCS1958086.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLT
                     NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
                     LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMQDMKAESKGTSPLSAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHTENEVKVKDSFDDSSANLFKLGAENIFLGRKAATKEE
                     AIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKTGVVF
                     CQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTTSVDE
                     VLELLAGRK"
     gene            5769..6131
                     /locus_tag="OQQ57_003455"
     CDS             5769..6131
                     /locus_tag="OQQ57_003455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HCS1958087.1"
                     /translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
                     HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRL
                     EHQLAAEKKTDYSTFPEI"
     gene            6134..7270
                     /locus_tag="OQQ57_003456"
     CDS             6134..7270
                     /locus_tag="OQQ57_003456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCS1958088.1"
                     /translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
                     LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
                     VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
                     ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
                     QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
                     DAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGGLQSLTVVPGTDGVQGTIELDPND
                     DIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
     gene            complement(7730..8167)
                     /locus_tag="OQQ57_003457"
     CDS             complement(7730..8167)
                     /locus_tag="OQQ57_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958089.1"
                     /translation="MADKAILWALISASTKEERKACSLSYFACKAAEAELGLAYMAAN
                     DNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNK
                     IKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE"
     gene            complement(8875..9336)
                     /locus_tag="OQQ57_003458"
     CDS             complement(8875..9336)
                     /locus_tag="OQQ57_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HCS1958090.1"
                     /translation="MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEK
                     LMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSD
                     TNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP"
     gene            complement(9348..>10408)
                     /locus_tag="OQQ57_003459"
     CDS             complement(9348..>10408)
                     /locus_tag="OQQ57_003459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1958091.1"
                     /translation="RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR
                     LESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHRGLPLALIS
                     TEGATAWCAEYDEWSNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY
                     ITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIG
                     GHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTSKGQNSFASQLAKE
                     LHTNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPS
                     GHPISNMQGTPEKPSDIR"
BASE COUNT         2643 a         2497 c         2382 g         2886 t
ORIGIN      
        1 ttgtccattg tattattggt gatttatgtt gctttacatt aatgacagtg atgtgtgtcg
       61 attaaatatt gttttaagca ttcatcataa aaatgtatca ttcgtttcaa aagatgtctg
      121 tgtttgtatg aatatattat tttcgtggat tctaatgatg attattaata aatgtcaaat
      181 atgaaagaaa ccatgtctgg gaaaaaattt acagataatt tattgtatga atatgatgat
      241 taaaatttca caattaaatc cgaaaaaaag agacgtaact gcttgttaat taataaatga
      301 tatcttctat atatttttat tgtttatagg tggctatttc ggtaaaaatg cattttcaga
      361 atatcaacca gcggtaaatc gacgtaaagg gagtgaattg tttggtaatt aggcgagtag
      421 acaggagagt ccccgcattg accagctaag gcaagccaga tgcgggttga tatgatcgaa
      481 ccagtcgtct gaggcgctta aaacgcagtc ttagagaatc cagtcatctc ctgcaggccc
      541 atttcacggc ccagcgcggt cattgggtgc acaaccacca gtccgcgaac acttttcttc
      601 agcttgccca tatcagcctg ctcttttttg gtaattgcgc gctgaaacgg catcttcatc
      661 agcttctgtg cttctttact cagtttttgg ctatgaacct cacgcaggcg agcaatttct
      721 gcttccagcg tggctttctc tttttccagc tcggcatatt tgtctgcggc ttcaaccagc
      781 gacagatcgg cctgctggtg gcggatggcg tccaggcgat cgctgagacg tttgatttcg
      841 tttttttcga cttctttcat gtgatggctt ctgataaaga taaatttata gcccctagta
      901 tgcgcgacca ggtgctttgt tcacaactga tgacattgta atagttctgc aacgtaatca
      961 ttaacatgct caaaaactac gcaattcgtt gattaattaa gaaatctata gaaaaaagat
     1021 aataaacagc agcggatgat tattgaggat tcagcacgtt ttccttaatg tcatctttac
     1081 cgggaaccta aactaaaatt ggtggccgcg cattcccggc gcggggtaat acggagatat
     1141 catcatgggc aaattaggtg aaaacgttcc gcttcttatc gataaagccg tagatttcat
     1201 ggcatcaagc caggcgttcc gggagtatct gaaaaaactt cctccccgta acgcgattcc
     1261 gtccggaata cccgatgaaa gcgtgccgtt atatctacaa cgtctggagt attatcgtcg
     1321 gctttatcgg ccgaagcagg tagaggggca gtaagcagac gttgcttact tttgaaaggc
     1381 tttttttaag ctgattttgg aaatcagctc agtcagtgaa aggaccattg ttgatcgcac
     1441 agcctgttga tagcgctgaa tttgcattgc atacaaactg gagtctgctg gttcaaactg
     1501 tggcggcggt ggtaacgccg ccacgcagtg cagttcacca aagggtccaa ggatttcgtc
     1561 gtcggtaaag gcgtactcgt tgccgtcgtg atttagctct tcacgcaatg ccatcagcag
     1621 ttccgcatct tcgtattcct ggcggttaat gacgcccaac ccgtaaatga gttttaaacg
     1681 cacagaaaga tcgcccagcg gaccgtcgcc gtcgagtaac ggttctacag catacttcac
     1741 cgcgtaatcg tctttgcgga atacctgaag caccagaaga tttaccgcct cggtcaaaag
     1801 ctcgacggcg gtgatcagaa agcttcgcac ggttttgcca gcattcagac gctcaagcac
     1861 acggttttca aaggcctggg tttgttccat tgttgcctgc atatctgaca atctgttatt
     1921 cgggcgcagg gtgtcctgcg cctggtccac cattattgca ttgctttata agcggttacc
     1981 gcctcggata caacctcact gttggcatca agaccggaaa tctgtgccag cgccgcctgc
     2041 ggacctttgt cagcgatcag tgctgccagt tcctgagcct gcggatcatc ttcactgcgg
     2101 aagtgcattg caccagcaat cccctgaatc agattcttgt gcggaaggct gtattccagc
     2161 gtaccgagca gtggcttgat cagacggtcg ccagcactca gtttacgcag cggctgacgg
     2221 cctacgcgct ctacatcatc tttcagatac gggttctcaa aacgaccgag gattttctgg
     2281 atgtacgccg catgtttgtc tgcgtcaaag ccgtagcgct tgatcagtac cgcaccactt
     2341 tcttccatcg caccttttac caccgcgcgg attttctcgt cgagaatagc gtcacgaatg
     2401 gtctgatgac cggccagttt tccgaggtac gcggttatag catgacccgt gttcagggtg
     2461 aagagtttac gttcgacaaa tgccatcagg ttgtcggtta actccatgct tgggatgttc
     2521 ggcagtgcgc ctttgaactg cgttttatcg acaatccatt cgctgaaagt ttctaccgtc
     2581 acttccagcg gatcgttagt tgccgaagcc gaaggcggta cgatgcggtc aacggcggaa
     2641 tcgacaaagc caacgtgttc ttctacccac gctttggcgt cttccggcag ggcgttcatc
     2701 acatggcctt tcagctgcgt ggtaccgcgt accatgtttt cacaggcgat gatgttcagc
     2761 ggggattcat taccttgttc tttgcgtttc accagccctt tggcgatagc cggagcaata
     2821 cgttccagca caaccgggcc aacggcggta gtgactaaat cgacctgagc aatcagatca
     2881 acgacatcat caccaatgct gctgacagca ttgacgccgg aaacggtatc tacctgctcg
     2941 gtttcaccaa ccacatgaac ctgatagcta tgacgggcat tcagggcatc aagtaccacc
     3001 tgattgacat cggcaaacgt cagttggata cccgcgtctg ccagcagttt accgataaag
     3061 ccacgaccga tattacctgc gccaaaatgt aatgctttca tagtattaac cttcatcaat
     3121 gtttttaccc gagagggctg gggtgaggct tttccctcac ccaaaccctc tccgtgagga
     3181 gaggggcagc gccggatgcg gcgtaagcgc cttatccggc ctacaagaac gtgcaaattc
     3241 aacaaatcgt gatgcatcct gtaggcctga taagcgtagc gcatcaggca attaacccca
     3301 ccttctccat gtggagaggg tgggattgga ttacttacga cctgccaaca gttccagcac
     3361 ttcatccacg ctggtggtgt gtgccagacg ctcgatgacg gactcatcat ccagtgcatt
     3421 ggtcaggctg gtgataacct gaatgtgctc gttgttacgg gctgcaatac caatcaccag
     3481 acgggcaatg tcatcttcct cttcaccgaa gcgcacgcct tccgggtact ggcagaacac
     3541 cacgcccgtt ttcagtacgc gatctttcgc ttcaaccgta ccgtgtggca ccgcgataga
     3601 ctcacccaga taagtcgggg tcagtttttc acgatccagc atcgcctgaa cgtattccgg
     3661 ctcaacgtaa ccgcctttca ccagctgctc gccagcaaaa cgaatcgctt cttctttggt
     3721 tgctgctttg cgaccgagga agatgttctc cgcgcccagt ttgaacaggt tagcactgga
     3781 atcgtcaaag ctgtctttca ctttcacttc gttttcagta tggcgctggg cagcaaccag
     3841 acgttcggtt aggctggtgt acaggccgct gtcgaggaag ttggtcagcg aaatatgctg
     3901 tgcctgcgga acctggcgca tagcgcgttc ggtcaggtca cggtgagtga tgacgaggtc
     3961 cacatctggc ggcaggttgt tgatcgcgct gttagtgacc gaaatctgcg acagacctgc
     4021 atcctgaatt ttcttacgca gcacgcctgc gcccatcgca cttgaaccca taccggcatc
     4081 acaggcaacg atgattttac gtacgtggct caggtcgtta gtcacatcgc ccgcagacag
     4141 cggagatgtg cctttagact cagctttcat gtcctgcata cgacgagttg ctgcttcaat
     4201 atcatcttct tctttcactt tgctggtttt cagcaaaata gcagagacaa cgaaggagac
     4261 agccatcgcc gcacacacac ccgcgatgtt agcgaaataa gccccttttg gtgtcatcgc
     4321 cagtacagca aggatagaac ccggagatgc cggagaaacc agaccaccgc ccaggatagt
     4381 cagcgtgaac acgccagtca taccgccgag gatgactgcg aggatcagac gcggattcat
     4441 cagcacatac gggaagtaga tttcgtggat accacccagg aagtggatga ttgccgcacc
     4501 gcccgcagac tgtttagcgc taccacgacc aaagaacatg tacgccagca gcacgcccat
     4561 acctggacct gggttagctt caatcaggaa gaagattgat ttacccagtt catgggactg
     4621 ctgaataccc agcggcgaga agataccgtg gttaatggcg ttgttgagga acaggatttt
     4681 cgccggttca acaaagatag acgccagcgg cagcatgtca tggacaacca tgaagttaac
     4741 gcccgcagcc agcattttgg acagggcttc aacaatcggg ccaatgccga ggaatgccag
     4801 aatagcgagg atcatcccga tgatgcctgc ggagaagtta ttcaccagca tctcaaaacc
     4861 ggatttgatc ttaccgtcta cccagcggtc gaagtgctta atgcaccagc cgcccagcgg
     4921 acctgcaatc atagaaccga ggaacatcgg catgtctgcg ccgacgataa cgcccatggt
     4981 ggtgatggca ccgactacgc cgccacgttc gccgcctacc agcttaccac cggtataacc
     5041 gatcagcagc ggcaggagat aagtgatcat cggcccgacc agcttcgcca gcgtctcgtt
     5101 cgttaaccac cctgttggaa taaataacgc ggtgatgata ccccacgcga taaacgcgcc
     5161 gatatttggc atcaccatgt tgctgaggaa acgaccaaag ctttgcactt tgatcttaat
     5221 atcggatgac ataaaaacac cccttcttat gtttgctgtc gcgcaggctg gaagcccgag
     5281 gttttttgtt aatgtggcgg cagaggtagc cggaccttgt agatactgcg aaatctggca
     5341 ctgaatcggt taactgtcca gtcgacggcc ttttgtgtga tattaatcac ataaatatag
     5401 gaggtagaga ggtaattgac gtgacgttca tcacaaaacg cttgtgtaaa aaagcaacaa
     5461 ggcggcgatt ttcgctaaaa atggcattta aatgtgagta gtatcacatt tttgttttga
     5521 tggtttgttg aatctttgtg atctgaatca caagatattt tcttacggcg ttcacctgat
     5581 gtgatctaca gcatgttatg ccttcgtcat acaatcgtta tgtaactaag caactcatca
     5641 cctctaaaaa ttattctttg gtgttatggc gagaatcgcg aacccggatt attgtcaaaa
     5701 tatcagcctg actcccttct ggctgccagc ccaaaaacaa cactgataaa cgtgaatccg
     5761 aggcagatat gtttctaaac tatttcgcgt tgggagtgct gatcttcgtc tttctggtga
     5821 ttttttatgg aatcatcgcg atacatgaca tcccttatct gattgccaaa aagcgcaatc
     5881 acccccatgc cgacgctatt catacggcgg gctgggtgag cctgtttact ctgcatgtta
     5941 tctggccgtt tctgtggatc tgggcgacgc tctatcaacc ggagcgtggc tggggtatgc
     6001 agtcacatgt tgcgtcgcag gagaaagcga ctgacccgga aatcgcctca ctttctgacc
     6061 gaatttcccg gctggagcat caactcgccg ccgagaaaaa gactgactat tccacgttcc
     6121 cggagatcta attatggatc tattgattgt tttaacttac gtggcgctgg cgtgggcggt
     6181 ctttaaaatc ttccgcattc cggtaaatca gtggacgctg gcgacggcgg cgctgggagg
     6241 cgtgtttctg gtgagtggtt tgattttgtt gatgaactac aaccaccctt acacttttac
     6301 cgcgcaaaag gcagtgatag cgatccctat cacgccacag gtgacgggaa ttgttactga
     6361 agtcactgac aagaataatc agcttattca aaagggcgag gtgcttttta agctcgaccc
     6421 ggttcgttac caggcgcgag ttgacagact tcaggctgac ctgatgacgg cgacgcataa
     6481 tataaagacg ctgcgtgcgc agctcactga agcgcaggcc aacaccaccc aggtttcagc
     6541 ggagcgcgac cgtctgttta aaaattatca acgttacttg aaaggcagcc aggcggcggt
     6601 gaatccgttc tcggaacgtg acatcgacga tgcgcggcaa aatttcctcg cgcaggatgc
     6661 gctggtgaaa ggctcggtgg cggagcaggc gcagatccag agccagctcg acagtatggt
     6721 taacggcgag caatcgcaga ttgtgagctt aagagcgcaa cttactgaag caaaatataa
     6781 ccttgagcag actgtcattc gcgcgccgag caatggctac gttactcagg tactgatccg
     6841 cccaggtaca tacgcagctg ccttgccgct gcgtccggtg atggtcttca tccccgagca
     6901 aaaacggcaa attgtcgccc aatttcggca aaactcgctg ttacgtctga aacccggcga
     6961 tgatgcggaa gtggtgttta acgcgctacc tgggcaggtg tttcacggca aactgactag
     7021 tattttacct gtcgtgccag gcggttctta tcaggcgcag gggggattgc aatcattaac
     7081 ggtcgtgccc ggcacggacg gtgtgcaggg aaccattgaa ctggacccta acgatgatat
     7141 cgatgcctta cccgacggca tctacgccca ggtggcggtt tactccgacc atttcagcca
     7201 tgtttcggtg atgcggaaag tgctgctaag aatgaccagc tggatgcatt atctttattt
     7261 ggatcattga gggggagggg ggagattatg gaactttgct ccttgtaagg actaattatt
     7321 tttgcatatt acttcattag ctgcgatgat ttttctttaa tattcattat gttaataagt
     7381 tctggatgag tgtgctctca ttggattttt tatccgtctt gttctgccgc aggatgagac
     7441 tatacatcgt cgagatcgca atgatgatat gagttgttcc tcctgcgacg gctctaatca
     7501 aaaaagagca ggagtgcttt tccatctatt gcgatgatgg ctttattatc tgaaggatga
     7561 cagtcacatt taaaaaatat ttaatctata gatcacaatg tagggtcatg gaatatatgt
     7621 atacaactat tttcttcttc acttttaatt atcgtattca ttataaaact aagttaaaaa
     7681 aactcctgga gagtgagtta ttaatatatt tttaaataaa attaagttat cattcatcga
     7741 tgcattttat agaatcatca atggccataa tagtactatt aactctcaat tttatatttt
     7801 tatcatcact acaaatatta actgaattta tatcaatgat ttttttattc ttatctttta
     7861 ttttatttac tgtttcaatg caatcagcgg caagttggag tggatttaga tttttcagat
     7921 atggtcttat gatctttccc ttacttaata aatagcatgt ataggattcg gaaagtccag
     7981 catctatttt gtacctcatt atattagata aggatgtgag aaattccttg ttatcattcg
     8041 cagccatata tgccagtccg agttcagcct ctgcggcctt acaggcaaaa tagcttagtg
     8101 aacacgcttt tcgttcctct ttagtactgg ctgatattag tgcccataat attgctttgt
     8161 ctgccaaatc taactctctc tgaaattgtc ttgcagtaac tgcactcgca gaaatagaga
     8221 aaaaaataca attgttaata accttgccat atttttttag tccgtaactg ttaatgtgct
     8281 atctggctct gaaaatatta actcatttaa tttttgcatg tcattagata aaccagttat
     8341 acaaccctcg gaacagaatc gaggtcctaa agacggacca aaagcgttta aacaactatg
     8401 tattgaaaat ccattgcgat tataagttcc tgtattaact gacggtacta atcgtatgcc
     8461 gtcaggtttt ctattgcttg ctcccgggtc attaacattc caactccata ggccttgagg
     8521 tattggccat ctatttataa atgtgtacaa cggggattat ttttacattg catattatta
     8581 ccagaagcga ctggaatact aagcacatca taaaaattat catcacatgg tatatctgaa
     8641 acacacgaaa gcatacctaa agttatgctg tataaacagg tggctaatcc caaggggatc
     8701 gattccagaa atcgggttca acggatactg ataaaaattc cacctacctt ccagcccaat
     8761 cggagcctga gtgttatacc gcccctgctg cggttaatgt taccgataat agttatagta
     8821 cagccctgat tcatcatcat actactgctg cggcagtctg atgaactatt gcttttacgg
     8881 attctcctta ttcttccttc tatccattcg ctttagcttt ttgagctctt gaagtttgct
     8941 ctttgcatca atattaccgt tatttacagc gaattccatc caataaatag ctctattcaa
     9001 attataatat tctgataatg ttggatttgt atctgataaa aagaccccat aattaaactg
     9061 cgctgtaaca ttcccctgag atgctgatct ttccaagaat cgcaattgtt tatcaatatt
     9121 atttttagta aagcagtaat attgatatag tcgaaatgat gcctctgaat caccatgttg
     9181 tgatttatac ttcagtttca tcagcttttc ttcacttaaa tcataggtca ttgctgtaga
     9241 tcccatcaca ctttcgtttt cttttatttt cacatcagca ccatgcaatt gatcaataag
     9301 agaaaaataa aaaaatagta acaagcatgc tttcatacat ctacaaccta tcttatatca
     9361 ctgggttttt ctggcgtacc ttgcatatta gaaatggggt gcccagatgg cccatatgtt
     9421 atccaattac caaggtcttt tgttgttata gccattagat ccttatttga attaaggttc
     9481 gttggtgctg ttagcactgt atccattttt aacttaccat tagttcctcg cccccaccac
     9541 gtccatagcg tgtcaggtcc tattacattt gtatgtaact ctttagctaa ttggctagca
     9601 aatgaatttt gtcctttact tgtattacaa gaaaataacc aaactgtcat cccatcttta
     9661 taattcccat caaatttaat tagatatgct agatctttag ctgtcatgat actgcgcgtt
     9721 gcggattcaa tagatgtggg ggtaccatgc cccccgattg tgaaaacgcc tgggatatta
     9781 atctcatcag ctacagaatg gataagatca ctttcggggt ataaatttat atcaaccaaa
     9841 ccttgcggat ctacatttat gaccggattc aacggatact gataaaaatt ccatcccccc
     9901 ttcagcccaa tcggatcctg agtgatatac cgcccctgca gcgggtcata atagcggtgg
     9961 cggttgtaat acaggccgga ctcctcatca tactgctgac ccggcaggcg aatgagctgc
    10021 tgcagatgat gcgggttctc atcactcagc aggttgctcc attcatcata ttctgcgcac
    10081 cacgctgttg ccccttccgt gctgatgagc gccagcggca ggccgcgatg gtcgcagtgg
    10141 tacaggtgga tttttcgcgc cggcgtgtac accgggtcca tctggctttg catctgcgcc
    10201 accgtcaggc cgcacgatgc cagccagcgg cggctttcct cactcacccg gtcagccagg
    10261 atttcacttt ccagccggtc gagcatctgc accagcaccg gcgggaacac cacactgcca
    10321 ccgtcttcgc cgccggactg ctgaagggta tccgccaggc tgcggcgctg cgttttcgcc
    10381 agctcaccgg tggcggtttc aactctga
//
LOCUS       DAJVUK010000150        10333 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.150, whole genome shotgun sequence.
ACCESSION   DAJVUK010000150 DAJVUK010000000
VERSION     DAJVUK010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10333
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.150"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            122..988
                     /gene="folD"
                     /locus_tag="OQQ57_003460"
     CDS             122..988
                     /gene="folD"
                     /locus_tag="OQQ57_003460"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HCS1958092.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQGE"
     gene            990..1202
                     /gene="ybcJ"
                     /locus_tag="OQQ57_003461"
     CDS             990..1202
                     /gene="ybcJ"
                     /locus_tag="OQQ57_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HCS1958093.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            1310..1831
                     /locus_tag="OQQ57_003462"
     CDS             1310..1831
                     /locus_tag="OQQ57_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1958094.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSL
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
                     GMVLMGMLWWRRR"
     gene            complement(1867..3252)
                     /gene="cysS"
                     /locus_tag="OQQ57_003463"
     CDS             complement(1867..3252)
                     /gene="cysS"
                     /locus_tag="OQQ57_003463"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HCS1958095.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            3426..3920
                     /gene="ppiB"
                     /locus_tag="OQQ57_003464"
     CDS             3426..3920
                     /gene="ppiB"
                     /locus_tag="OQQ57_003464"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HCS1958096.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV
                     TVSE"
     gene            3923..4645
                     /gene="lpxH"
                     /locus_tag="OQQ57_003465"
     CDS             3923..4645
                     /gene="lpxH"
                     /locus_tag="OQQ57_003465"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HCS1958097.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            4763..5272
                     /gene="purE"
                     /locus_tag="OQQ57_003466"
     CDS             4763..5272
                     /gene="purE"
                     /locus_tag="OQQ57_003466"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HCS1958098.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            5269..6336
                     /gene="purK"
                     /locus_tag="OQQ57_003467"
     CDS             5269..6336
                     /gene="purK"
                     /locus_tag="OQQ57_003467"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HCS1958099.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETVLTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG
                     EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
                     YMGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
                     NNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVIWAQSKFS"
     gene            complement(6473..7364)
                     /locus_tag="OQQ57_003468"
                     /pseudo
     CDS             complement(6473..7364)
                     /locus_tag="OQQ57_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706399.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
     gene            complement(7361..8176)
                     /locus_tag="OQQ57_003469"
     CDS             complement(7361..8176)
                     /locus_tag="OQQ57_003469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HCS1958100.1"
                     /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     SHPQPLAAAWMQRAEETGLFGPLAMAASDPLTAELRQFRHCFQAALNGVKTDWRHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARAGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP"
     gene            complement(8187..9446)
                     /locus_tag="OQQ57_003470"
     CDS             complement(8187..9446)
                     /locus_tag="OQQ57_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HCS1958101.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPAFSLISELNEGKTLLH
                     AGPPMRWQEMTGPMKGACVGGCLFEGWAKDEAQALAMLEQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMEHGIDLTAMMAQGITMGDEFHQRNIASSALLMRTLAPQIARLDHDKQHIAEV
                     IDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(9456..10333)
                     /gene="fdrA"
                     /locus_tag="OQQ57_003471"
                     /pseudo
     CDS             complement(9456..10333)
                     /gene="fdrA"
                     /locus_tag="OQQ57_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415051.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT         2272 a         2937 c         2776 g         2348 t
ORIGIN      
        1 taaccttcgc aagaggtcgc ttcacgcgat aaatctgaaa cgaaacctga cagcgcgccc
       61 cgcttctgac aaaataggcg catccccttc gacctacgta acagatggaa tcctctctct
      121 gatggcagca aagattattg acggtaaaac gattgcgcag caggtgcgct ctgaagttgc
      181 tcaaaaagtt caggcgcgta ttgcagccgg actgcgggca ccaggactgg ccgttgtgct
      241 ggtgggtagt aaccctgcat cgcaaattta tgtcgcaagc aaacgcaagg cttgtgaaga
      301 agtcgggttc gtctcccgct cttatgacct cccggaaacc accagcgaag cggagctgtt
      361 ggagcttatc gatgcgctga atgccgacaa caccatcgat ggcattctgg ttcaactgcc
      421 gttaccggcg ggtattgata acgtcaaagt gctggaacgt attcatccgg acaaagacgt
      481 ggacggtttc catccttata acgtcggtcg tctgtgccag cgcgcgccgc gtctgcgtcc
      541 ctgcaccccg cgcggtatcg tcacgctgct tgagcgttac aacattgata ccttcggcct
      601 taacgccgtg gtgattggcg catcgaatat cgtcggtcgt ccaatgagca tggaactgtt
      661 gctcgcaggt tgcaccacta ccgtgactca ccgtttcact aaaaatctgc gtcaccacgt
      721 agaaaatgcc gatctgttga tcgttgccgt cggcaagccg ggctttattc ctggtgactg
      781 gatcaaagaa ggcgcaattg tgattgatgt cggcatcaac cgtctggaaa atggcaaagt
      841 tgtgggcgac gtcgtgtttg aagacgcggc taaacgcgcc tcatacatta cgcctgttcc
      901 gggcggcgtt ggcccgatga cggttgccac gctgattgaa aacacgcttc aggcgtgcgt
      961 tgaatatcat gatccacagg gtgagtaaca tggcgacatt ttctttaggt aaacatccgc
     1021 acgttgagct gtgcgatttg ctgaaactgg aaggctggag cgaaagcggc gcgcaggcga
     1081 aaatcgcgat tgccgaaggc caggtgaaag tcgacggtgc ggttgaaacg cgcaaacgct
     1141 gcaaaatcgt cgccggtcag acagtgagtt ttgcaggtca cagcgtacag gttgttgcct
     1201 gatccctttc ccggcctgta tcaacaggcc ggttctcttt tcagactttt gccctctacg
     1261 ccccgttcat ccatgctgat agcatcgaca ttttgccgaa gcgaccatca tgccaaccgt
     1321 tattacgcac gccgccgttc ccctatgcat tggtttaggg ttgggttcga aagtcatccc
     1381 tccgcgtctg ttatttgccg gaatcatcct ggcgatgctg cccgacgccg acgtattgtc
     1441 gtttaaattt ggcgttgctt acggcaatgt ttttggtcat cgcgggttta cccattcgct
     1501 ggtgtttgcg tttgttgtcc cgctgttatg tgtgctgatt ggacgccgat ggttcagggc
     1561 tgggcttatt cgctgctggc tgtttttaac cgtctcgttg ctatcgcaca gcttgctgga
     1621 ttcggtaacc actggcggta agggcgttgg ctggctgtgg ccgtggtcag atgaacgctt
     1681 tttcgctccc tggcaggtga ttaaagtcgc gccgtttgca ttgtctcgtt acaccacgcc
     1741 gtacgggcat caggtgataa tttctgaatt gatgtgggtg tggttgccgg ggatggtgct
     1801 tatgggaatg ttgtggtggc gcaggcgata accggatgcg aaaactcgca tccggcaaca
     1861 gcgcaattac ttacgacgcc aggtggtccc ttgcgggcca tcttccagca cgatccccat
     1921 ctcgttaaga cggtcacgcg ccgcatctgc cgccgcccag tctttcgctt tacgggcatc
     1981 cagacgctgt tgaattaacg cttcaatctc agccacttcg ctgtcgtctg cctgcgcgcc
     2041 gctttgcagg aacgcttccg gttcttgctc cagcaggccc aatacagcgg aaagtttacg
     2101 caggtgagat gccattgcat tcgccgctgc catatcttct gctttcagac ggtttacttc
     2161 acgcgccata tcaaacagta cggaataggc ttccggggtg ttgaaatcgt cgtccatcgc
     2221 ttcaataaag cgcgcttcaa acgcttcgcc accggcaggc gcaacggttt tatctgtgcc
     2281 gcgcagcgca gtgtagagac gctccagcgc cgcacgcgtc tgcttcaggt tctcttcgct
     2341 gtagttcaac tggctgcgat agtggcccga catcaggaag taacgcacgg tttccgcgtc
     2401 gtagtatttc agcacatcgc gcacggtaaa gaagttaccc agcgatttgg acatcttctc
     2461 gcggtcaacc atcaccattc cggagtgcat ccagtagttc acatactgac catcatgggc
     2521 acaggtggac tgcgcgattt cgttctcgtg gtgcgggaac atcaggtctg aaccgccgcc
     2581 gtggatatca aagtggttac ccagctgctt gcagttcatg gccgaacatt caatgtgcca
     2641 gccaggacga cccgcgcccc acggagacgg ccagctcggt tcgccctctt tcgacatctt
     2701 ccacagaacg aagtccatcg ggttgcgttt gtcatcaacc acgtcaacgc gcgcgccagc
     2761 ctgcagctgg tcgagatcct gacgcgacag cacgccataa gtcggatcgg tcgggacgtc
     2821 gaacatcacg tcgccgttgt cagccacata agcgtgacct ttggcgatca gttgttcagt
     2881 gagttcaata atttctgcga tatggtgcgt cgcgcgcggc tccatatccg ggcgcagaat
     2941 gttcaaagca tcaaaatctt tgtgcatttc ggcgatcatg cgatccacca gcgccacaaa
     3001 gctttcgcca ttttcattgg cgcgtttgat gattttgtcg tcgatatcgg taatgttgcg
     3061 cacatacttc agcttatagc cgaggaaacg cagatagcgc gcaaccacgt caaaagcaac
     3121 aaaggtacgc ccgtgaccga tatgacagag atcgtaaacg gtgattccac acacgtacat
     3181 gccgacttcc ccggcgtgaa taggcttaaa ttcctctttt tggcgtgtca gagtattgaa
     3241 gatttttagc atcgaagatt ccgtttagac atgtgtgggt aattgagttg cgtataatac
     3301 ccatatttcc cgcgcgaatc agcatacatt gcgtgatgat ccgatcgtgc ggttatgcta
     3361 taacaccacc ctatatatga cccgaaccgg gttgaagcac caatcaaacg gaacaggatg
     3421 caaaaatggt tactttccac accaatcacg gcgatattgt catcaaaact tttgacgata
     3481 aagcacctga aacagttaaa aacttcctgg actactgccg cgaaggtttt tacaacaaca
     3541 ccattttcca ccgtgttatc aacggcttta tgattcaggg cggcggtttt gaaccgggca
     3601 tgaaacaaaa agccaccaaa gaaccgatca aaaacgaagc caacaacggt ctgaaaaata
     3661 cccgtggtac gctggcaatg gcccgtactc aggctccgca ctctgcaact gcacagttct
     3721 tcatcaacgt ggttgataac gacttcctga acttctctgg cgaaagcctg caaggttggg
     3781 gctactgcgt gtttgctgaa gtggttgaag gcatggacgt ggtagacaaa atcaaaggtg
     3841 ttgcaaccgg tcgtagcggt atgcaccagg acgtgccaaa agaagacgtt atcattgaaa
     3901 gcgtgaccgt tagcgagtaa tcgtggcgac actctttatt gcagatcttc atctctgcgt
     3961 ggaagaaccg gcgatcaccg ccggttttct gcgtttttta gcgggggaag ctcgcaaggc
     4021 cgacgcgctg tatattcttg gcgatctgtt tgaagcgtgg attggcgacg acgatcccaa
     4081 tccactccat cgccagatgg cggcagcgat caaagcggtg tccgattccg gcgttccctg
     4141 ttatttcatt catggcaacc gtgattttct gctcggcaaa cgctttgccc gtgaaagtgg
     4201 catgacgtta ttgccggaag aaaaggtgct cgaactttat ggccgccggg tgttgattat
     4261 gcatggcgac acgctgtgca ccgatgacgc gggttatcag gcttttcgcg ccaaagtcca
     4321 caaaccctgg ctgcaaatgc tattcctcgc cctgccgttg tttgtgcgca aacgcattgc
     4381 cgcgcgaatg cgcgcgaaca gcaaagaagc caacagcagt aaatcgctgg cgatcatgga
     4441 cgttaaccaa aacgcagtgg tcagtgcgat ggaaaaacat caggtgcaat ggctgatcca
     4501 cgggcatacc catcgcccgg cggtgcatga acttatcgcc aaccagcaac ctgcttttcg
     4561 cgtggtactg ggtgcctggc atacggaagg ttcgatggtg aaagtcacgg cggatgacgt
     4621 tgagctgatt cattttccgt tttaaaaaaa ccacaacttt gctgatttca cagccacgca
     4681 accgttttcc ttgctctctt tccgtgctat tctctgtgcc ctctaaagcc gagagttgtg
     4741 caccacagga gttttaagac gcatgtcttc ccgcaataat ccggcgcgtg tcgccatcgt
     4801 gatggggtcc aaaagcgact gggctaccat gcagttcgcc gccgaaatct tcgaaatcct
     4861 gaatgtcccg caccacgttg aagtggtttc tgctcaccgc acccccgata aactgttcag
     4921 cttcgccgaa agcgccgaag agaacggtta tcaggtgatt attgcgggcg caggtggcgc
     4981 agcgcacctg ccaggcatga ttgccgccaa aacgctggtg ccggtgctgg gcgtgccagt
     5041 acagagcgcc gcactgagcg gtgtcgatag cctctactcc atcgtacaaa tgccgcgcgg
     5101 cattccggtg ggtacgctgg cgattggtaa agctggcgcg gcaaacgcgg cattactggc
     5161 agcacaaatt ctcgcgactc acgataaaga gctacaccag cgtctgaatg actggcgcaa
     5221 agcccagacc gacgaagtgc tggaaaatcc ggacccgcga ggtgcggcat gaaacaggtt
     5281 tgcgtcctcg gtaacgggca gttaggccgt atgctgcgtc aggcaggcga accgttaggc
     5341 attgctgtct ggccggtcgg gctggacgct gaaccggcgg cggtgccttt tcaacaaagc
     5401 gtgattaccg ctgagatcga acgctggccg gaaaccgtat taacccgcga gctggcgcgt
     5461 catccggcct ttgtgaaccg cgatgtgttc ccgattattg ctgaccgtct gactcagaag
     5521 cagcttttcg ataagctcca cctgccgacc gcgccgtggc agttacttgc cgatcgcagc
     5581 gagtggcctg cggtgtttga tcgtttaggt gaactggcga ttgttaagcg tcgcactggt
     5641 ggctatgacg gtcgcggtca atggcgttta cgcgccaatg aaaccgaaca gttaccggca
     5701 gagtgttacg gcgaatgtat tgtcgagcag ggcattaact tctctggtga agtgtcgctg
     5761 gttggcgcgc gcggctttga tggcagcacc gtgttttatc cgctgacgca taacctgcat
     5821 caggacggta ttttgcgcac cagcgtcgct tttccgcagg ccaacgcaca gcagcaggcg
     5881 caagccgaag agatgctgtc ggcgattatg caggagctgg gctatatggg cgtgatggcg
     5941 atggagtgtt ttgtcacccc gcaaggtctg ctgatcaacg aactggctcc gcgtgtgcat
     6001 aacagcggtc actggacaca aaacggtgcc agcatcagcc agtttgagct gcatctgcgg
     6061 gcgattaccg atctgccgtt accgcaacca gtagtgaata atccgtcggt gatgatcaat
     6121 ctgattggta gcgatgcgaa ttatgactgg ctgaaattgc cgctggtgca tctgcactgg
     6181 tacgacaaag aagtccgtcc ggggcgtaaa gtggggcatc tgaatttgac cgacagcgac
     6241 acatcgcgtc tgactgcgac gctggaagcc ttaatcccgc tgctgccgcc agagtatgcc
     6301 agcggcgtga tttgggcgca gagtaagttc agttaagcag gtgctcattt gattgccgga
     6361 tgcggcgtaa acgccttatc cggcttaccg ctccggtacc cattgtaggc ctgataagac
     6421 gcgtcaagcg tcgaatcagg catggtgcac cgattgccgg atgctctcat cactacagcg
     6481 aaatacaggt ccccgcttcg cccgccagcg tctcttcaat tcgcgataac gccccaatcc
     6541 acgcgggttt actacggctt ctgacataac cactcaccgc cgttaccttc ggccccatcg
     6601 aaccatcggc tttggcaaat ggcgctaact catccggtgt ggcatggcga atggcacgtt
     6661 gctgcggcgt tccccagttt tcatataccg catcagcatc ggtgaggatc accagtccat
     6721 cggcattaat ctgctcggcg agcaacgcag tggcgagatc tttatcaatc accgcttcac
     6781 tccctgcccc atcttccgtc acaggcacac cgccgccgcc actgcaaatc accacatgcc
     6841 cctctttgag caacaactcg atggcttcgc tgtcgagaat tttacgcggt tgcggagacg
     6901 ccaccacccg gcgcaaatat ttaccatcac gtttcatctg ccagccgtaa gccgcttcca
     6961 gtgcctcttg ttcttctggc tgataaaccg gaccaataaa tttctctggc tgcaaaaacg
     7021 ccggatcatc aggcgaaacc tcaatgcgcg tcagcaccgt cgtaacaggc ggtatctgcg
     7081 gctgtgcgct caagctctgc gccagcatat agcctcatcc cctggctttc cgccaccagc
     7141 acatccagcg gatacggttc tacctctttc cacgccagat tctgtaacgc cagcagcccc
     7201 acctgcggcc cgttgccgtg aacaatcgcc agccgataag aacgggccag gcgtgccagc
     7261 gcgggtacag cactggcgat attgcgatat tgattttccg ccgtcagcgc ctcaccgcgc
     7321 tggagtaagg cgttgccccc aagagctaca accagtgttt tcatggtttt ccttgtaata
     7381 attgttggcc aagccagaac cccagcagcg tatctgcccc tgacgtatgc cccagcgcca
     7441 gcagcgaatc aatcgcaaca gcggtacgtt tcgggcaact cagagcatgg acaaagtgca
     7501 ggagtggcga ggcgaaatat ccttgcgcgg cataacgtaa ataactgacg ctcaccgctg
     7561 tggtaacgag ttgaagattg tcggaacagg caaaaaacgg gcgaccggcg cgcgcatcta
     7621 aagcgccata ataccaagcc gccagcagca ttccgctcaa cgtgtcatca tgacttggcg
     7681 ttaatccggg gcctttaccc agccagtgcc gccagtcggt cttaacgcca ttgagcgcgg
     7741 cctgaaaaca gtgacgaaac tggcgtaatt cagcggtcag cggatcgctt gccgccatcg
     7801 ccagtggtcc gaaaagtccg gtttcctccg cgcgttgcat ccatgcagct gcaagcggtt
     7861 gaggatgcga aggcggcgta atacgcagca aacaataacg ctgtggctgt ttaaccgtga
     7921 aacgcccgag gcgaatccct tgagccacaa cctgtggtcg ttcattgccg cataatccac
     7981 cgcataacgc atcgaattgc gcgcggcgaa gcacccatcc tccggggccg aaaccactac
     8041 cctgacgatg cagcgttaac agttcgccgc tttccgtcat caggttaatc gcccgccgcc
     8101 acactcccgc taaccgccag gactggcgat aattcggtgc gctactgctg gcaagcagag
     8161 gatggatgat cgtcattgcg cgttcctcaa ccaatcccca tgctttcagc cagtgcttcc
     8221 agcgcctgtt caaagcacgc cagcggtgcc cgcacggtgc ctgcgccaat ctgcccgatc
     8281 cccgcctctt tatgggcgat accggtattg atgagtggcg taatgccggt ttctaccacg
     8341 cgacgaatat ccagccccag gcacgcgccc tgaaaatccc agcctgggat ctgcaactgc
     8401 atattgcgtt caaggtaaat ttccgccatc tcttcagata ccgccctggc cgcttccatg
     8461 ccacccgcac cgacaaagcg cgttacgcca ggcgctgcga tcattgccgc acctccgata
     8521 ccaaaggttt cggtaatcgc gctatcgccc atatccgggt tcgcctgctc ctgcgagaag
     8581 ccggtgaaaa acagaccttg cggagtgttt acaggcgcag taaaccagcg ttcacccagc
     8641 ccgcttaccc gaatcccgaa catattgccg ttgcgggtca tagccgtaac gatgctgcct
     8701 gcgcggatca tcgcgccagc atccatcgcc gccttgcagt aggccatcgc gaggttgagg
     8761 aagaactgat cggtcacgct gaggaaatcg atcacttccg caatgtgctg tttatcatga
     8821 tcgaggcgag caatttgtgg ggccagcgta cgcattaaca gtgctgagga agcaatattg
     8881 cgttgatgga actcatcgcc catcgtaatg ccctgcgcca tcatcgccgt gagatcgata
     8941 ccgtgctcca tgcgccccag cgccgcgctt aatactggca ttaacacatc gcgcatccag
     9001 cgatggcgag tcaggacatc ttcgccgtaa gcgccaaaac gcatcacttt gccgatacct
     9061 tcgttgaggt tgcagtacgc ccggttgccg tcggtcacgt tctcgaccac cagcatcggc
     9121 atactggcag aagtaatgcc gcccattggc ccgacggcat tcacatggtg acaaggaatg
     9181 aagttcactt ccccctgctc cagcatcgcc agtgcctgcg cttcatcttt cgcccagcct
     9241 tcgaacagac atccgcccac gcacgcccct ttcatgggtc cggtcatctc ctgccagcgc
     9301 attggcggcc cggcgtgaag cagtgttttg ccctcgttta gttcgctgat aagtgaaaaa
     9361 gccggttgca catccagcca gtgtggacga gcacgacgaa tttgttcgat aaccgcagca
     9421 ttggcttgcg ccactgatgt aaacatggga accccttatt gcaaacgttc taataaacga
     9481 gccagttttt tattgccgcc ggcgactggc gaccattggt aatgcacaac cggtttgctg
     9541 gcgctttgta gctccagcgc aaagctgcgt aatccgatgt taatcacggc gacgttttcc
     9601 agtaatgacg gtgtatgttg ctgtgcggca ggcgagagcg gataaattaa cgctgccgcc
     9661 agcaaggtgg cttccggcag cgaactcact accgcgatcc ccgcatcttc cagcgtggcg
     9721 atttgctgcg agcggcattg cgggtcacgt tcagtgcctg tcaccgtggc aatggcatac
     9781 agtggttgat tatctgaacg cgcggcacag gctttttgct aggcgcttac cagcgaggcg
     9841 gcaggatcgg cagtcgcacc gaagccaatc acgacatcaa gtagcaatac gcgcacttgt
     9901 ggtttagcgc cgagatcggc aattaactgg ttgcgtaagg ctgggtcgat catcggatgg
     9961 ggacgcccga cggtgtagaa atcatcgccg aggtcaataa tctggtgacc atcggcgtcg
    10021 agcatcatgc cgtgatgatg ggtatcgtcg gcttccacgc caaggtgtcc agcaagtaat
    10081 cccgccgctt cggcagccag cgtaccgccg gtatacaaac cgcaaataaa tccgctgctg
    10141 acaggcgcta ttgcgttacg tcgcgccgtg acgcgtgaaa gcaggcaagc caggcgtgcg
    10201 gcctcatcca gcgaggaggc aaaccagaca ttctcgtcgc gggccaccgc cggggtataa
    10261 cctaaaaaca gcgccaccat cggtttgccg gttgctttca tggcattaac aattttcaga
    10321 cgcacagctt cgg
//
LOCUS       DAJVUK010000151        10278 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.151, whole genome shotgun sequence.
ACCESSION   DAJVUK010000151 DAJVUK010000000
VERSION     DAJVUK010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10278
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.151"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            177..2056
                     /gene="kup"
                     /locus_tag="OQQ57_003472"
                     /pseudo
     CDS             177..2056
                     /gene="kup"
                     /locus_tag="OQQ57_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
     gene            2223..2642
                     /gene="rbsD"
                     /locus_tag="OQQ57_003473"
     CDS             2223..2642
                     /gene="rbsD"
                     /locus_tag="OQQ57_003473"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HCS1958102.1"
                     /translation="MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMAL
                     TQGVPSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIR
                     YTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF"
     gene            2650..4119
                     /gene="rbsA"
                     /locus_tag="OQQ57_003474"
                     /pseudo
     CDS             2650..4119
                     /gene="rbsA"
                     /locus_tag="OQQ57_003474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418205.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
     gene            4124..5089
                     /gene="rbsC"
                     /locus_tag="OQQ57_003475"
     CDS             4124..5089
                     /gene="rbsC"
                     /locus_tag="OQQ57_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HCS1958103.1"
                     /translation="MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTIN
                     NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVA
                     AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADL
                     FGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNK
                     IKIIVYSLCGLLASLAGTIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIV
                     GTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
     gene            5114..6000
                     /gene="rbsB"
                     /locus_tag="OQQ57_003476"
                     /pseudo
     CDS             5114..6000
                     /gene="rbsB"
                     /locus_tag="OQQ57_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
     gene            6126..7055
                     /gene="rbsK"
                     /locus_tag="OQQ57_003477"
     CDS             6126..7055
                     /gene="rbsK"
                     /locus_tag="OQQ57_003477"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HCS1958104.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR"
     gene            7059..8051
                     /gene="rbsR"
                     /locus_tag="OQQ57_003478"
     CDS             7059..8051
                     /gene="rbsR"
                     /locus_tag="OQQ57_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HCS1958105.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(8017..9444)
                     /gene="mdtD"
                     /locus_tag="OQQ57_003479"
     CDS             complement(8017..9444)
                     /gene="mdtD"
                     /locus_tag="OQQ57_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtD"
                     /protein_id="HCS1958106.1"
                     /translation="MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMFIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     RATWHWIFLINIPIGIAGLLYARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGSVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
                     SVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLL
                     KTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(9467..10159)
                     /locus_tag="OQQ57_003480"
     CDS             complement(9467..10159)
                     /locus_tag="OQQ57_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HCS1958107.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKKNFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAF
                     KTCQALLRSPDK"
BASE COUNT         2504 a         2474 c         2718 g         2582 t
ORIGIN      
        1 tcggtcaact gatccttaac tgatcggcat tactcaaagg ggggtatttt tctttgagcc
       61 aggttaatgt ggccgcattt aggagtacga ttttgccgtt aatcgtgcat actgtgcgct
      121 tttttgtggg ccaagggact aagcacacat ttcatatttc aacgaaagac tagtctatga
      181 gcactgataa taagcaatca ttgcccgcga ttaccctcgc ggcgattgga gttgtctacg
      241 gcgatattgg taccagcccg ttatatacac ttcgtgaatg tttgtccggc cagtttggtt
      301 ttggcgttga acgcgatgcc gtgtttggct ttttatcgct gatcttctgg ctgctaatct
      361 ttgtggtttc cattaaatat ctcaccttcg tgatgcgggc aggatgcggg cagataacgc
      421 cggtgagggg gggatcctga cgttgatgtc gcttgccggg cgtaatacgt cggcgcgaac
      481 cacatcaatg ctggtgatta tggggctaat cggcggcagc tttttctatg gtgaagtagt
      541 cataacaccc gctatttcgg tgatgtcagc cattgaaggt ctggaaatcg tcgccccgca
      601 gctggatacc tggatagttc ccctctcaat tatcgttctc actttattat ttatgattca
      661 aaaacatggc acggctatgg tcggtaagct gtttgcgccg atcatgctga cctggttttt
      721 gattctggca ggactggggt tacgtagcat tattgctaac ccggaagtgc tgcatgcgct
      781 gaatccaatg tgggcggtgc atttcttcct tgaatacaaa acggtttctt ttattgcatt
      841 aggggcagtg gtgttgtcga ttacgggggt cgaggcgctg tatgctgata tggggcactt
      901 tggtaagttc cctattcgcc tggcgtggtt caccgtcgta ttaccttcct tgacccttaa
      961 ttacttcggt cagggagcgc tgttgttaaa gaacccggaa gcgattaaga acccgttctt
     1021 cctgttggca ccggactggg cgctgatccc gctgctgatc atcgccgcac tggcgacggt
     1081 aattgcctcg caggcggtta tctctggcgt cttctcattg acgcgtcagg cggtacgtct
     1141 gggatatttg tcgccgatgc gcattattca cacctccgaa atggagtcag ggcaaatcta
     1201 tattccgttt gtgaactgga tgctctatgt cgcggtcgtg attgtgattg tcagctttga
     1261 gcactccagc aacctggcgg cggcgtacgg gattgcggtg accggaacca tggtgctgac
     1321 gtctattctc tcgactaccg tggcacgtca gaactggcac tggaataagt attttgttgc
     1381 gctgatcctg attgctttcc tttgtgtcga tattccattg ttcaccgcta acctcgataa
     1441 actgctctcc ggcggttggt tgccattgag cctcggtacg gtgatgttta tcgtgatgac
     1501 cacctggaag agcgagcgtt tccgcttgct gcggcggatg catgaacatg gtaactctct
     1561 ggaagcgatg attgcttcgc tggagaaatc accgcctgtt cgcgtgcccg ggaccgcggt
     1621 gtatatgtcg cgtgcaatca acgtcattcc ctttgcgctg atgcataacc ttaaacataa
     1681 caaggtattg catgagcggg tgattctgtt aactctgcgt accgaagacg cgccatatgt
     1741 ccataatgtc cgtcgggtac agattgaaca actgtcgctc actttctggc gcgtggtggc
     1801 aagttatggt tggcgagaaa cgccaaacgt ggaagaagtt ttccaccgct gcggtctgga
     1861 aggattaagt tgccggatga tggaaacctc cttctttatg tcgcatgagt cgttgatcct
     1921 cggcaaacgc ccgtggtatt tgcgtctgcg cggcaagctg tacttgctgc tgcaacgtaa
     1981 tgcgctgcgt gcaccagatc aatttgaaat cccgccaaac agggttatcg aactgggtac
     2041 tcaggtcgaa atctaacgcc agacgcctcc tttctccata agggggcgtt tttgttttca
     2101 tggttaatca ccatgtaaaa cgtttcgagg ttgatcacat ttccgtaacg tcacgatggt
     2161 tttcccaact cagtcaggat taaactgcgg gtcagcgaaa cgtttcgctg atggagaaaa
     2221 aaatgaaaaa aggcaccgtt cttaattctg atatttcatc ggtgatctcc cgtctgggac
     2281 ataccgatac gctggtggtg tgtgatgctg gtttacccat ccccaaaagt acaacgcgta
     2341 tcgatatggc attaacccag ggtgtacctt cttttatgca ggtgctgggc gtcgttacaa
     2401 atgaaatgca ggtcgaggct gccattatcg cggaagagat caaacaacat aatccgcaac
     2461 tccacgaaac gttgctcact caccttgagc agctgcaaaa acaccaggga aataccattg
     2521 aaattcgtta caccacgcat gaacaattca aacaacaaac cgcagaaagt caggcggtaa
     2581 ttcgcagcgg agaatgttct ccgtatgcga atatcattct ctgtgctggc gtgacgttct
     2641 gaggccgtca tggaagcatt acttcagctt aaaggcatcg ataaagcctt cccgggcgta
     2701 aaagccctct cgggcgctgc gttaaatgtc tatccgggcc gcgtgatggc gctggtgggc
     2761 gaaaacggcg cgggtaaatc caccatgatg aaagtgctta ctggtatcta tgctcgcgat
     2821 gccggcacgc ttttatggct ggggaaagaa acgacattta ccgggccgaa atcttcccag
     2881 gaagccggga ttgggattat ccatcaggaa ctgaacctga tcccgcagtt gaccattgcc
     2941 gaaaacattt tcctcggtcg tgagtttgtt aatcgctttg gcaaaattga ctggaaaacc
     3001 atgtatgccg aagcggataa attgctggct aaacttaacc tgcgctttaa aagcgacaag
     3061 ctggtgggcg atctttccat cggtgaccag caaatggttg aaatcgccaa agtgctgagc
     3121 tttgagtcga aagtcatcat tatggatgaa ccgaccgatg cgctgaccga taccgaaacc
     3181 gaatccctgt tccgcgtcat ccgcgaacta aaatcgcaag gccgcggtat tgtctatatc
     3241 tcccaccgca tgaaagaaat cttcgagatt tgcgatgccg ttaccgtttt tcgtgacggg
     3301 caatttattg ctgagcgcga agtggcatca ctgaccgaag attcgctgat tgagatgatg
     3361 gtgggtcgca agctggaaga tcaatatcca cacctggaca aagcgccggg agatatccgc
     3421 ctgaaagtcg ataatctctg cggacctggc gttaacgatg tctcttttac tttacgcaaa
     3481 ggcgaaattc ttggcgtctc tggtttgatg ggcgcaggtc gtaccgaact gatgaaagtg
     3541 ctctacggcg cactaccgcg caccagcggt tacgtcaccc tggatgggca tgaagtcgtt
     3601 acccgttcac cgcaggatgg cctggcaaac ggcattgtgt atatctccga agaccgtaaa
     3661 cgtgacggtt tagtgttggg catgtcagta aaagagaaca tgtcgctgac agcgctgcgc
     3721 tacttcagcc gcgctggcgg cagtttgaag catgccgatg aacagtaggc tgtgagtgat
     3781 ttcattcgtc tgtttaatgt gaaaacaccg tcgatggaac aggcaattgg tctgctttcc
     3841 ggtggcaatc agcaaaaagt gttgatcctt gatgaaccta cccgtggcgt agatgtcggc
     3901 gcgaaaaaag agatctatca actgattaac cagttcaaag ccgatggctt gagcatcatt
     3961 ctggtgtcat cggagatgcc agaagtatta ggcatgagcg atcgcatcat cgtcatgcat
     4021 gaagggcatc tcagcgggga atttactcgt gagcaggcca cccaggaagt gttaatggct
     4081 gccgctgtgg gcaagcttaa tcgcgtgaat caggagtaaa aaaatgacaa cccagactgt
     4141 ctctggtcgc cgttatttca cgaaagcgtg gctgatggag cagaaatcgc ttatcgctct
     4201 gctggtgctg atcgcgattg tctcgacgtt aagcccgaac tttttcacca tcaataactt
     4261 attcaatatt ctccagcaaa cctcggtgaa cgccattatg gcggtcggga tgacgctggt
     4321 gatcctgact tcgggcatcg acttgtctgt aggttctctg ttggcgctaa ccggcgcagt
     4381 tgctgcatct atcgtcggca ttgaagtcaa tgcgctggtg gctgtcgctg ctgctctcgc
     4441 gttaggtgcc gcaattggtg cggtaaccgg ggtgattgta gcgaaaggtc gcgttcaggc
     4501 gtttatcgct acgctggtta tgatgctttt actgcgcggc gtgaccatgg tttataccaa
     4561 cggtagccca gtgaataccg gctttactga gaacgccgat ctgtttggct ggtttggtat
     4621 tggtcgtccg ctgggcgtac cgacgccagt ctggatcatg gggattgtct tcctcgcggc
     4681 ctggtacatg ctgcatcaca cgcgtctggg gcgttacatc tacgcgctgg gcggcaacga
     4741 agcggcaacg cgtctttctg gtatcaacgt caataaaatc aaaatcatcg tctattctct
     4801 ttgtggtctg ctggcatcgc tggccgggac cattgaagtg gcgcgtctct cctccgcaca
     4861 acccacggcg gggactggct atgagctgga tgctattgct gcggtggttc tgggcggtac
     4921 gagtctggcg ggcggaaaag gtcgcattgt tgggacgttg atcggcgcat taattcttgg
     4981 cttccttaat aatggattga atttgttagg tgtttcctcc tattaccaga tgatcgtcaa
     5041 agcggtggtg attttgctgg cggtgctggt agacaacaaa aagcagtaat aacgactaca
     5101 ggacatcttg aatatgaaca tgaaaaaact ggctaccctg gtttccgctg ttgcgctaag
     5161 cgccaccgtc agtgcgaatg cgatggcaaa agacaccatc gcgctggtgg tctccacgct
     5221 taacaacccg ttctttgtat cgctgaaaga tggcgcgcag aaagaggcgg ataagcttgg
     5281 ctataacctg gtggtgctgg actcccagaa caacccggcg aaagagctgg cgaacgtgca
     5341 ggacttaacc gttcgcggca ccaaaattct gctgattaac ccgaccgact ccgacgcagt
     5401 aggtaatgct gtgaagatgg ctaaccaggc gaacatcccg gttatcactc ttgaccgcca
     5461 ggcaacgaaa ggtgaagtgg tgagccacat tgcttctgat aacgtactgg gtggcaaaat
     5521 cgccggtgat tacatcgcga agaaagcggg tgaaggtgcc aaagttatcg agctgcaagg
     5581 cattgctggt acatccgcag cccgtgaacg tggcgaaggc ttccagcagg ccgttgctgc
     5641 tcacaagttt aatgttcttg ccagccagca gattttgatc gcactaaagg tttgaacgta
     5701 atgcagaacc tgttgaccgc tcatccggat gttcaggctg tattcgcgca gaatgatgaa
     5761 atggcgctgg gcgcgctgcg cgcactgcaa actgccggta aatcggatgt gatggtcgtc
     5821 ggatttgacg gtacaccgga tggcgaaaaa gcggtgaatg atggcaaact agcagcgact
     5881 atcgctcagc tacccgatca gattggcgcg aaaggcgtcg aaaccgcaga taaagtgctg
     5941 aaaggcgaga aagttcaggc taagtatccg gttgatctga aactggttgt taagcagtag
     6001 ttttaatcag gttgtatgac ctgatggtga cataaatacg tcatcgacag atgaacgtgt
     6061 aatataaaga aaagcagggc acgcgccacc ctaacacggt ggcgcatttt atggacatcc
     6121 cgaatatgca aaacgcaggc agcctcgttg ttcttggcag cattaatgct gaccacattc
     6181 ttaatcttca atcttttcct actccaggcg aaaccgtaac cggtaaccac tatcaggttg
     6241 catttggcgg caaaggcgcg aatcaggctg tggctgctgg gcgtagcggt gcgaatatcg
     6301 cgtttattgc ctgtacgggt gatgacagca ttggtgagag cgttcgccag cagctcgcca
     6361 ctgataacat tgatattact ccggtcagcg tgatcaaagg cgaatcaaca ggtgtggcgc
     6421 tgatttttgt taatggcgaa ggtgagaatg tcatcggtat tcatgccggc gctaatgctg
     6481 ccctttcccc ggcgctggtg gaagcgcaac gtgagcgtat tgccaacgcg tcagcattat
     6541 taatgcagct ggaatcacca ctcgaaagtg tgatggcagc ggcgaaaatc gcccatcaaa
     6601 ataagactat cgttgcgctt aacccggctc cggctcgcga acttcctgac gaactgctgg
     6661 cgctggtgga cattattacg ccaaacgaaa cggaagcaga aaagctcacc ggtattcgtg
     6721 ttgaaaatga tgaagatgca gcgaaggcgg cgcaggtact gcatgaaaaa ggtatccgta
     6781 ctgtactgat tactttagga agtcgtggtg tatgggctag cgtgaatggt gaaggtcagc
     6841 gcgttcctgg attccgggtg caggctgtcg ataccattgc tgccggagat acctttaacg
     6901 gcgcgttaat cacggcgttg ctggaagaaa aaccattgcc agaggcgatt cggtttgccc
     6961 atgctgcagc tgcgattgcc gtaacacgta aaggcgcaca accttccgta ccgtggcgtg
     7021 aagagatcga cgcattttta gacaggcaga ggtgacgctt ggctacaatg aaagatgttg
     7081 cccgcctggc gggcgtttct acctcaacag tttctcacgt tatcaataaa gatcgcttcg
     7141 tcagtgaagc gattaccgcc aaagttgaag cggcgattaa agaactcaat tacgcgccat
     7201 cagccctggc gcgtagcctc aaactcaatc aaacacatac cattggcatg ttgatcactg
     7261 ccagtaccaa tcctttctat tcagaactgg tgcgtggcgt tgaacgcagc tgcttcgaac
     7321 gcggttatag tctcgtcctt tgcaataccg aaggcgatga acagcggatg aatcgcaatc
     7381 tggaaacgct gatgcaaaaa cgcgttgatg gcttgctgtt actgtgcacc gaaacgcatc
     7441 aaccttcgcg tgaaatcatg caacgttatc cgacagtgcc tactgtgatg atggactggg
     7501 ctccgttcga tggcgacagc gatcttattc aggataactc gttgctgggc ggagacttag
     7561 caacgcaata tctgatcgat aaaggtcata cccgtatcgc ctgtattacc ggtccgctgg
     7621 ataaaactcc ggcgcgcctg cggttggaag gttatcgggc ggcgatgaaa cgtgcgggtc
     7681 tcaacattcc tgatggctat gaagtcactg gtgattttga atttaacggc gggtttgacg
     7741 ccatgcgcca actgttatca catccgctgc gtcctcaggc cgtctttacc ggaaatgacg
     7801 ctatggctgt tggcgtttac caggcgttat atcaggcaga gttacaggtt ccgcaggata
     7861 tcgcggtgat tggctatgac gatatcgaac tggcaagctt tatgacgcca ccattaacca
     7921 ctatccacca accgaaagat gaactggggg agctggcgat tgatgtactc atccatcgga
     7981 taacccagcc gacccttcag caacaacgat tacaacttac tccgattctg atggaacgcg
     8041 gttcggctta gatttacgct gtcttttgat caaattatta ccatcggttg ttttcagaag
     8101 catgaacatt gctgctgaag caacagtaat aatgcccatc gtgataaacg tatagtggaa
     8161 ttgttcgaca gtcgttgtgc cttccatccc ttcataaacg cgaaggacgg ccgcacttac
     8221 agcaacgcct aaactaatcg acagttgctg cgtgaccgcc agaacactgt taccgctgct
     8281 ggcgttgtca tcggtcagat cggcaagtgt gatggtattc atcgcggtaa attgcgtcga
     8341 catagccatc cctaatataa acaacggcaa gatcagcatc catatcgcca ttgccggtga
     8401 ttgcaaagag aactgagcga tcattagccc aataatcacc gtgatcccca ctaacgtatg
     8461 gcgatagccc agacgacgta agacttgggt aaccatcgat tttgcaataa tggaacctaa
     8521 cgctgtcggt gccatcatac agccggcaat aaacgcctga taaccaaatc ctacctgtaa
     8581 catcaatggc ataaggaacg gtacactacc ggtccccaga cgggttgcaa tattgcctac
     8641 gataccgatc gagaaagtgc gggttttaaa taaatctaat gaaattaatg ggtttggcgt
     8701 gtgtcgcgca tggagaatat agagaagcag taacccgatg ctggtgacaa ttaccgtcaa
     8761 ggcaatccag ctggcgacaa tcttttcccc gaatagctct attccgcttg agaagagaac
     8821 aaggctgagg ccaaacagca aaaagccagt gatatcgaat ctgcgtcgtg cggtggtgaa
     8881 attgggcata tgtttgcgcg cgtaaagaag gcccgcaata cctatgggga tattgattaa
     8941 aaatatccag tgccaggttg ccctggtgac cagcacgccg ccaagaacgg ggcctaaaat
     9001 tggccccacc agacccggca tggcgacaaa attcaataca ggaagaagtt cattacgagg
     9061 ataagcacgc agtaaggcca gccgagcaac aggcatcatc attgcgccgc ctatcccctg
     9121 aataacccgg aagacaacca gctgtggtag cgaattagaa agtgcgcagg ccagagaacc
     9181 caacgtgaac agactcacgg caagggtaaa aatgcgacgc gtaccgaagc gatcggctag
     9241 ccatccgctt accggaataa acatcgccac cgtcagcgta taactgatga tggctgattg
     9301 catcgcgaga ggagaacgat taaggctatg agcgattgcg ggtaaggcgg tattcagaat
     9361 agtggcatca agtgcctgca tgaagaaggc catcgccgcg atccacggca aacccgccat
     9421 actacgcttc tttttatcgc tcattcaatg tcctgttatc gggttatcac ttatcaggtg
     9481 agcgtagcag cgcctgacaa gttttaaatg ccgcgtcgcc atcgctttgg ataatcgcat
     9541 cgacaatcgc ctggtgcaga tccagcttta tcactgtgtc gctggtaatt gacgtgaagt
     9601 aagtgtgata aaccgaatgg aatagcgagg cgaatgaggt caaaaacgga ttggcgctca
     9661 tttcatagat atgctcatgc caggccatat cgacttcgat ccagcgttca cggcgaaagt
     9721 tcttttttaa tgccgccatt tcggccatta acgtattgag atgcgccttc tgttccgcgg
     9781 tgccaaccgt tgctgccagt aggcaggctt gcggctccag acagatacgc ataaccagaa
     9841 agtgatcgat gacctgatga aagttctctt ctgtcatcca ccaggtaagc aattcctgat
     9901 caagaaaatt ccagtttgat tgtggcatga cccgggtacc aattcgcggt cgcggtaaaa
     9961 ccatcccttt tgccgttaac gttttgaccg cttcgcgtac cgctgtacga ctcactccaa
    10021 attgctcgcc cagctcaatc tcaccaggca aaatggtgcc gggttcatat tcacctttta
    10081 agatgcgttg cgccagcttc tcagccagaa catacgaaag gtttttctgt gcagctaact
    10141 gttgtgcgct taaaggcatt actaatcttc ctttttcttt ttattcctcc ttagtatgcc
    10201 accaggaagt gtgattacgg ttgcaaaaac ggcaaattgc ttgttttatg gcacattaac
    10261 ggggcttttg ctgaaaaa
//
LOCUS       DAJVUK010000152        10147 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.152, whole genome shotgun sequence.
ACCESSION   DAJVUK010000152 DAJVUK010000000
VERSION     DAJVUK010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10147
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.152"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..236
                     /locus_tag="OQQ57_003481"
     CDS             <1..236
                     /locus_tag="OQQ57_003481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1958108.1"
                     /translation="TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLV
                     YEKTYTAELSSIAGTPIEAGPFDTVVLFKINYN"
     gene            388..1434
                     /locus_tag="OQQ57_003482"
     CDS             388..1434
                     /locus_tag="OQQ57_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HCS1958109.1"
                     /translation="MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG
                     ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAILLVTLLSSAIVGWLL
                     VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTCM
                     MLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLPSGTMLIPMLAGAVLQ
                     SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM
                     AWGLTRFMHIDFMTAYLATSPDGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA
                     IARFISTYAPKRSA"
     gene            complement(1431..2222)
                     /gene="nei"
                     /locus_tag="OQQ57_003483"
     CDS             complement(1431..2222)
                     /gene="nei"
                     /locus_tag="OQQ57_003483"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HCS1958110.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
                     VTHVGTRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="OQQ57_003484"
     CDS             complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="OQQ57_003484"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HCS1958111.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHALAFARRLRSTFAEKEIVVAA"
     gene            complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="OQQ57_003485"
     CDS             complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="OQQ57_003485"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpC"
                     /protein_id="HCS1958112.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLNVGIGGLEGRLLKDGDRLPIGKSKRDFM
                     EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSPQSNRMGYRLQGQILKR
                     TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ
                     PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN"
     gene            complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="OQQ57_003486"
     CDS             complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="OQQ57_003486"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HCS1958113.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
                     EAIPGMNNITVILRNPESLALDAIELLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="OQQ57_003487"
     CDS             complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="OQQ57_003487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HCS1958114.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            5601..7082
                     /gene="dtpD"
                     /locus_tag="OQQ57_003488"
     CDS             5601..7082
                     /gene="dtpD"
                     /locus_tag="OQQ57_003488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HCS1958115.1"
                     /translation="MNKHASQPRAIYYVVAPQIWEYFSFYGMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGSFSLMYAAGNVGSIIAPIACGY
                     AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGTIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="OQQ57_003489"
     CDS             complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="OQQ57_003489"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HCS1958116.1"
                     /translation="MTTHLVWFRQDLRLHDNLALAAACSNSSARVLALYIATPRQWAT
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN
                     GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHCPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPTTQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVMLDYPQP
                     IVDHKEARLRTLAAYEEARKGA"
     gene            complement(8539..9048)
                     /locus_tag="OQQ57_003490"
     CDS             complement(8539..9048)
                     /locus_tag="OQQ57_003490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HCS1958117.1"
                     /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
     gene            complement(9333..9707)
                     /locus_tag="OQQ57_003491"
     CDS             complement(9333..9707)
                     /locus_tag="OQQ57_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958118.1"
                     /translation="MFTKLSIAILLAFSAYVHAETSAPIFFEDVGSIDSWFSIKYQKY
                     ENVKDEQYPEILIYYGVKGSGINRVDGWFFSCAKAGRTCSLIFMADFGESRYFKPAKI
                     AMNKNNLIIRTSDVEIAFKITK"
     gene            complement(9692..>10147)
                     /locus_tag="OQQ57_003492"
     CDS             complement(9692..>10147)
                     /locus_tag="OQQ57_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000171008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1958119.1"
                     /translation="PLGLIDKPAPVFNRDLNSDPYYLAVNNCYSYALNRYGNPGSRIF
                     GGGGLQPGELSGKEFSKLTCGSIFEASKNDGAKDLDNGSCPSGYHKAQLFIRPHNFIG
                     MGGDYHWYRQDANGEWSDKQGVGAIRFRGKDPFPPIDYPEKCGTIFLPN"
BASE COUNT         2367 a         2754 c         2438 g         2588 t
ORIGIN      
        1 aaacgttggt tgaagaagat aaagcattgt tgattggtaa tggtctgaag ctacgtttgc
       61 tggatgaaaa cgcctcgcct tataccttca ataaatatgc tgaatacgcc gatttcacca
      121 gcgacatgtt ggtctacgaa aaaacctata cagctgaact ttcgtccatt gcaggtaccc
      181 ccatcgaggc tgggcccttc gatacagtgg tgctttttaa aattaactat aactgatttg
      241 ccatgatgcc ctttgcagcc ggaaagggca tctctttcag aaaattgctg attttcctct
      301 tttccttgat tactgttatt ttttcctggc ccggctttct ttatgctgta tcgatacacc
      361 aaagagaaaa taatgaggga gcgaaggatg ccagttttgc agtggggaat gttatgtgtg
      421 ctatcacttc tcctttctat tggtttcctc gcggtacatc tcccggcggc gctattactt
      481 gggccgatga tcgccgggat catcttcagt atgcgcggaa ttactctgca acttccccgc
      541 tccgcttttc tcgccgcgca ggccattctt ggctgcatga ttgcgcaaaa cctcactggt
      601 tcgattctca ccacgctggc cgccaactgg ccgatcgtgc ttgctatttt actggtgacg
      661 ctgctttcca gcgccatcgt gggttggtta ttggtgcgct atagctcact gcctggaaat
      721 accggtgcct ggggttcttc tccaggcggc gcagcggcaa tggtcgctat ggcgcaagat
      781 tacggcgcag atattcgcct ggtggcgttt atgcaatatc tgcgagtgct gttcgtcgcg
      841 ggggccgctg ttctggtcac ctgcatgatg ctgggtgata acgctgaagc ggttaaccag
      901 caaatcgtct ggttcccgcc agtgagcatt aatctcctgc ttacgatttt gctcgcagtc
      961 gttgccggta cggcgggatg catgctgcgt cttccttccg gcacgatgct catcccgatg
     1021 ctggcgggcg cagtgctcca gtctggtcag ctcatcacca tcgaactacc ggaatggctg
     1081 ctggcgatgg cgtatatggc aattggctgg cggattggtc ttggtttcga taaacaaatc
     1141 ttactgcggg cactacgccc actaccgcaa atcctgctgt cgatttttgc tctgctggct
     1201 atttgtgcag gtatggcgtg gggactgacc cggtttatgc atattgattt tatgactgcc
     1261 tacctcgcca ccagtcccga cgggcttgat accgtggcgg tcatcgccgc agggagcaat
     1321 gccgatatgg cgcttattat ggcgatgcaa accctgcgcc tgttcagtat tttgctgacg
     1381 gggccagcca ttgcgcggtt tatttcaacc tatgcgccga agcggtcggc ctagtgctgg
     1441 cagcctggac accagtaaaa cgggcgcgag gacaacgtgg ttttctcaat gatgccgcca
     1501 cagcgttcgc acagttcgcc atcacgatga aaaaccttaa agcgaaacag cgccccatga
     1561 tgcttattct catccacctg cccccgcgta gcgtaagaaa accgaggaat ctccagtaac
     1621 gcgtgtgcga gtgcatccag ttgcgccgca ttgagatctt tcgctttatg atttccagtc
     1681 aacccaacct gccagaggat ctccacccgc aaataattgc caagcccagc cagaaacgcc
     1741 tgatcgagca gtaatcctgc aaactgacgg ttacgaaagc gcggtgacaa taaccgttcc
     1801 tttaccacct ccggcgtcag attcggatcc agcacatcgg gaccaacgcg ttgtaaaaac
     1861 ggatgcgtgg tcagttgttc cggcctcaac atctcaatat ccgaggcgct ataaagcaga
     1921 atggttttgt cagccgtttg cagttttacc cgcaatactc gcgtggtctg cggctcttcg
     1981 ccggtatcaa ccacgcgcca gacgccgtaa agctgattat ggctgtagag cgttaagtcg
     2041 ttggaaaaat gagttaacaa cgccttacca cgcgttccca catgggtaac gtgttgaccg
     2101 ataagttgtg attgataagt ttttaactgc gggaaggcaa accagacatc agttagtggt
     2161 ttgcctttga tcgccgcctc caggttatcc gctgcacggc ggatctccgg gccttcaggc
     2221 atggtgatat ccttttttca ttctttatta atcggggtta tgctgcgaca acaatctcct
     2281 tttcggcaaa tgtagagcgt agtcggcggg cgaacgccag tgcgtgctcg ccgtcgccat
     2341 gcaggcagac tgtttgcgcc gtgaccgttg cccattcgcc ggtgatactt ttgactctgc
     2401 cgtgttgcac catctctagc gtttgcgcca gcgcctgttc ttcgttttca atcaacgcgc
     2461 ctggctgact tcgcggcacc agcgagccgt cagcctgata accgcgatcg gcaaacactt
     2521 cctcgcgcgt tgtcaggcca tattgcttgc ctgcacgaat cagctcgctt cctgccagcc
     2581 caacgagaac caatgctgga tcgcaagcgt ataccgctct ggcgatggcg tctgccagtt
     2641 gtgcttcttt cgccgcctgg ttgtacaaca tgccgtgcgg tttgacatga cgcattacgc
     2701 cgccttgcgc acgggcaatc gttgccagcg cgccaatttg atacagcgtc tgggcgtaaa
     2761 cggtttctgg cggcagctgc atggcgctgc gaccaaaatt ttccctgtcg ggaaaactcg
     2821 ggtgagcgcc aatcgcgaca ccatttttta ttgcttcacg cacgcaagcc tgcatggttt
     2881 gggcatcgcc tgcatgaaat ccacaagcaa tattggcaga ggaaaccagc gttaatagct
     2941 ctgcgtcgct ggcgcagcct tcgcccagat cggcgttcag gtcaattttc attgtgtagc
     3001 cgccacgcta attgttcgaa ataacgttgt tgatcttgcc gcgctttcag tgcctcttcc
     3061 agtgaacact ggacaaaatg aatcggctga ccgagcggaa tttgcgccag atggtacata
     3121 tcagcctcaa tgatacaggc aatacgcggg taaccaccgg tggtctgtgc gtcgttcatc
     3181 aacacaatcg gctgcccgtt atgcggcacc tgcaccacac ccggtaacaa accgtgagat
     3241 aacagttcgc gatcggtggt gcgttttaaa atttgcccct gtaagcgata gcccatgcgg
     3301 ttactttgcg ggctaagctg ccagggcgaa cgccagaatg catcctgcga ggcgcgatcg
     3361 aactcatgat attccggccc cggcaaggcg cgaatgcggt tgccccacag cagctgttta
     3421 acgccctgcg cttccataaa atcacgcttc gatttgccaa tcgggagtcg gtcaccatcc
     3481 ttcagtaaac ggccttccag cccgccaatc cccacgttga gatcggtgct gcatgacccc
     3541 attaccggcg gaacatcaat accacccgcg accgccagat aactgcgcat gccgtgctgc
     3601 gggcgtttaa gcgttaaacg ctggcctgct ttcatcggca agcgccagcc ggtccagacg
     3661 gcgttatcat ccagccgcgc ttcgcaaccg gcacccgtca gagcaaacca cccatcagtt
     3721 tcgaactcaa ccgttaactg accgagcgtg atctccagcg cgggggcatt ggcgtcatta
     3781 cccaccagca ggttagcaat gcgtaacgca ggcatatcca gtgcgccgca gtggctgata
     3841 cccgactggc gaaaaccgtg acgaccgcca tcctgcacag tggtatacat gcccgcacga
     3901 ataatcttca gcatactccc tccttctgcg gtacaaagcg cacgctgtct cccggacgta
     3961 ataagatggg ttcgtcacgc gccggatcaa acaggctgag tgaggtatga ccaatcaact
     4021 gccagccacc cggcgttgcc agcggataaa caccagtctg cggcccgccg atcccgacag
     4081 aacctgccgg aacgagcaag cgcggttcag cgcgccgtgg cgtgtgtagt tgttccggca
     4141 aactcccgag atacgggaag cccggttgaa aacctaaaaa ccagaccacg tattccacgg
     4201 aggagtgcaa ttcaacaacc tgtttttcgc tcaacccgca atgcgccgcg accaccgcca
     4261 aatccggtcc gcctgcacca ccgtaaacca ccggaatttc aataaagcga gactcaggtt
     4321 ccagggcctc gctctcctcc caccagcgtt gcaaaagctc tatggcatcc agcgccagcg
     4381 actcaggatt acgcaaaatc accgtgatat tgttcatgcc gggaatggct tcaaccacat
     4441 tcggcatatc caccagacgc tgcgccagtc gccagatccg tttctggcta gccagcgtca
     4501 ccggcggttc cagttccagc actaccgccg tttcacctat cagataacaa cgcgctcgtt
     4561 gcactttcga tccctctgat tattcgttat gcaggattag gaatatcaat aaaggtcaca
     4621 tcaagatcgg tattttcatt cagccactcg ctcaatgcgc gaataccacc acgttcagtg
     4681 gcatggtgac ctgcagcata aaaatgcaat ccctgctcgc gggctgaatg aatggtctgt
     4741 tcagaaactt cgccagtaat aaaagcatcc acgccaaaac gcgcggcgct atcgataaaa
     4801 ctttgcccgc cgcccgtgca ccaggcgacg cgctggacca cctcaggtcc ggtatcgcca
     4861 caccataacg gcttacgtcc cagacgcgct tcaatccagg aggctagttc cagtcccggc
     4921 acaggcatgg tcagctctcc ccacggcacc aacggctcaa tttcgcccat gaccgtgatc
     4981 cccagtaacg ccgccagctg tgcgttattg cccagctcag gatgtgcgtc aagcggcaaa
     5041 tgccagccat acaggttgat atcattcgcc agcaacgttt ttaaacggtt acgcttcatt
     5101 ccgcgaatga ccggagactc tcctttccag aagtagccat gatgcacaat gaccgcatcc
     5161 gcgcccagac gcactgcctc atcgagcaaa gcctggctgg cggtgacacc ggtaacaatt
     5221 ttttgcaccg tctctttgcc ttccacctgc aaaccattcg gcgcgtaatc actaatcgcc
     5281 gcgctgttca gtttttcgtt aatcagttgt tccagttcgg tgtttttcat cttcgcgcct
     5341 tccgtattct gatagctaca ccgttaacat agcgttacct cgcctgttcg tcgatagcca
     5401 atcttttgac atattaagaa acaaacccga cgccaaaaga cgcaaattgt ttatatcatc
     5461 acgcttcagc taatgtatat ttatgcaatc agacagcata ttgcataaat aatcagatct
     5521 gtatcaaagt tttaacttta aggaaacaca agcacgccgc gcaactatta cgtgacgttg
     5581 ccgtcaattg tggaattatt atgaataaac acgcatcaca gccgcgcgct atttactatg
     5641 tcgttgcgcc gcaaatctgg gaatatttta gcttttacgg catgcgtgcc ctgctgattc
     5701 tctatctcac caatcaacta aaatacaacg atactcacgc ctacgagtta tttagcgcct
     5761 actgttcgct ggtgtatgtc acgccaatcc tcggtggctt tttggcggat aaagttctcg
     5821 gcaatcgcat ggcggtgatg ctgggggcgt tattgatggc gatcggtcat gtggtgttgg
     5881 gtgccagtga gatccatccg tcattcctct atctgtccct ggcgataatt gtttgtggct
     5941 atggtctgtt taaatccaat gtcagttgcc tgctcggcga gctgtatgag ccaaccgatc
     6001 cgcgtcgtga tggcagtttc tcgctgatgt atgcagcggg taacgtgggg tctattatcg
     6061 cacctattgc ctgtggctac gcccaggaag agtacagctg ggcgatgggc tttggcctgg
     6121 cggcggtggg tatgatcgcg ggtctggtca ttttcttatg tggcaatcgt catttcacac
     6181 atacccgcgg cgttaataaa aaagtactgc gtgcgacaaa ctttctcctg cctaactggg
     6241 gatggctgct ggttctgctg gtggcaacgc ctgcgctgat taccgtattg ttctggaaag
     6301 agtggtcggt atacgcctta attgtcgcga ctattattgg cctgggtgta ctggcaaaaa
     6361 tttatcgcaa agcagaaaac cagaaacagc gtaaggagct ggggctgatt gtgacgctca
     6421 ccttcttcag tatgttgttc tgggccttcg cacaacaggg cggcagctcg attagccttt
     6481 atatcgaccg cttcgttaac cgcgatatgt ttggttatac cgttccgact gctatgttcc
     6541 agtcgattaa tgccttcgca gttatgctgt gcggtgtgtt cctggcgtgg gtggttaaag
     6601 aaagcgtcgc aggtaatcgt accgtgcgca tctggggaaa atttgctctt ggtctcggcc
     6661 tgatgagcgc cgggttctgc attctgacct taagcgcccg ctggtccgca atgtatggtc
     6721 actcttctct gccactgatg gtattaggcc tggcggtgat gggctttgcg gaactgttta
     6781 tcgacccggt tgccatgtcg caaattacgc gcattgaaat ccccggtgtg accggcgtat
     6841 taaccggcat ttatatgctg ctttccggca cgattgcgaa ctatctcgcg ggcgtgattg
     6901 ccgatcagac atcgcaggct tcgtttgatg cttccggggc gatcaactac tccatcaatg
     6961 catatattga agtatttgat caaattacct ggggcgcact ggcgtgtgta ggactggtac
     7021 tgatgatttg gctgtatcag gcgctgaaat tcagaaaccg cgcgctggcg ctggagtcat
     7081 aataggccag caccatacct gataaaacgc tcgctgcgtt ttatcaggct cctttcctcg
     7141 cttcttcgta cgctgccagc gttcgcagcc ttgcctcttt gtgatcaact atcggttgcg
     7201 gataatccag catcacacct gctttctgcg cccacttcca cggctcatgc accgctttcc
     7261 ctggtacatc gcgcagctcc ggtaaccatc gacgaataaa ctcgccctca cggtcaaatt
     7321 tctcgccctg ggttgtcggg ttgaaaatac gaaaatacgg cgctgcatcg gttccggttg
     7381 aagcggccca ctgccagcca ccgttattgg ctgccaaatc accatcaatc agctgcgaca
     7441 tgaaatatcg ctcgccttcg cgccagtcga tcaacaaatc tttcaccaga aaactggctg
     7501 taatcatccg tagccggtta tgcatccagc cagtgctgtt aagctgacgc atggcagcat
     7561 cgacaatcgg gtatcccgtt ttgccttcct gccaggcctg taaatgtgcg ggattgctct
     7621 gccactgcac acgatccgtc caggcaataa acggacaatg tttacacaac gaggggtaat
     7681 acgtcatcag atgacggtag aactcgcgcc agatcagctc actaagccag acactaccgg
     7741 ccccaccgtc cagcgcctgc ggctgttccg ccaacaagcg atgcaaacac tggcgaggcg
     7801 ataacccgcc cgttgccagg ctggcggaca aacgactggt gccttccact gccggaaaat
     7861 ctcgttgttg ctcatattct ccggcaccgt tctggcaaaa ctggcgtaat tgcgcaatcg
     7921 ccgctttttc ttccaccggg aaatgcgcag tatcgaaaga ctgacgagga taattcagcg
     7981 taatggatgg cgagggctct atcgatccgc tactacgaac ttttggcgca gcgacgcact
     8041 ccggcatccc ttcccgcagc cgtttcagcc aggcattctt aaaaggcgta aagactttgt
     8101 acatctcgtg attaccggtc atcaccgcgc caggcggcag gatcacgctg tcatcaaatc
     8161 cttcacacac cacgttacgc agcgctcttt caacttccac atcccgcgcc cgctcattca
     8221 cttcatactg atagttataa aacaggtggg taacgctgtt ttccgcgcac acctgtttaa
     8281 ctatttcgac actggcgaca aagtcatcca cttcacggaa caataaagga ataccttttt
     8341 ccgcaagcgc tatttgtagc ccattcagtt gagcattgat aagttcagcc tgacgcggcg
     8401 acatgttatg cgtcgcccac tggcgtggtg tagcgatata caacgccagc acgcgtgcag
     8461 acgaattgct gcaggcggca gccagtgcga gattatcgtg caaacgtaaa tcctggcgaa
     8521 accagaccag atgggtagtc ataaaactcc tgaatggcgc aagttaatca cacgcggcca
     8581 aagttcgaaa taacgctgcc ctgaaagcca ggcgtcagga taaagcgcca tatagtgttt
     8641 gatacgcatc agcggcgcaa gaagtggttg ctcgccacgg cgataactgt cgataagcgc
     8701 agccagctgc tggcgttctg tggaatcaat atgcgggcga aaataaccct gaacgtgcat
     8761 caaaacattg gtgtgatcgc gcgggttggc ggggtgagaa agcaaaacaa ctacgcgttg
     8821 gcggtactgg ttgtaatagt catccagatt ttgccactgg tgaatatcag ccacgaacgg
     8881 gccaagtttg cggtactccg gctgagaatg cgccagaaag acgagtttat agcggctgtg
     8941 ataatcgaga agcgccccgc gcgttaagcc atgttctttc agtcgatgta actcatgaag
     9001 ggcaaagata cggattaggg tgctgtcatc aaatcgttgt agattcatta ctgctcctga
     9061 acggtataaa ggagtaagtg tagacgatgg taaatgaatt ttatggggca gagtttttgc
     9121 ggggaagtat tttgttggta aaaatattat caacttcatc tgagcgagaa ttattctact
     9181 atttcccgag ctgcattcat tttttgtatt ttttattttt agaaaataac agttctcaaa
     9241 gcttaattac ctcactatta attgtatttc aaactaacaa tcgcactcca ttttctctct
     9301 ttaaaaaaca taaacattgt taaaacaaat atttatttcg ttatcttaaa tgctatttct
     9361 acatcactcg tccttataat caaattattc ttattcatag ctatttttgc aggtttaaaa
     9421 tagcggcttt caccaaagtc agccatgaaa attagactac aagttctccc agcctttgca
     9481 catgagaaaa accacccatc aactctattt attcctgaac ctttaacacc ataataaatc
     9541 agaatttctg ggtattgttc atccttcacg ttttcatatt tttggtattt aattgaaaac
     9601 caagagtcta tactgccaac atcttcaaaa aatattggag ctgatgtttc cgcatgaaca
     9661 tatgcagaaa atgctaacaa aatggcaata cttagtttgg taaaaatatc gttccacact
     9721 tttcaggata atctattggg gggaagggat cttttcctct aaatctaatt gctcccactc
     9781 cttgtttgtc agaccattcg ccatttgcat cctgacgata ccagtgataa tcccctccca
     9841 tgcctataaa attgtgagga cgaataaaca attgagcttt atggtaacca gatggacaac
     9901 tcccattatc taaatccttg gcaccatcat tttttgacgc ttcaaaaata ctaccgcaag
     9961 tgagtttaga aaactctttt ccagataatt ctccaggttg taatcctccg ccgccaaaaa
    10021 tcctactccc agggtttcca tacctattta gagcatatga ataacaatta tttacggcaa
    10081 gataatacgg atctgaattt aggtctcgat tgaatactgg agcaggttta tcaattaagc
    10141 ccagcgg
//
LOCUS       DAJVUK010000153        10118 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.153, whole genome shotgun sequence.
ACCESSION   DAJVUK010000153 DAJVUK010000000
VERSION     DAJVUK010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10118
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.153"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            205..357
                     /gene="hokA"
                     /locus_tag="OQQ57_003493"
     CDS             205..357
                     /gene="hokA"
                     /locus_tag="OQQ57_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HCS1958120.1"
                     /translation="MPQKYGLLSLIVICFTLLFFTWMVRDSLCELHIKQGRYELAAFL
                     ACNLKE"
     gene            complement(545..757)
                     /gene="cspA"
                     /locus_tag="OQQ57_003494"
     CDS             complement(545..757)
                     /gene="cspA"
                     /locus_tag="OQQ57_003494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HCS1958121.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(1038..1328)
                     /locus_tag="OQQ57_003495"
     CDS             complement(1038..1328)
                     /locus_tag="OQQ57_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HCS1958122.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            1761..2471
                     /locus_tag="OQQ57_003496"
     CDS             1761..2471
                     /locus_tag="OQQ57_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HCS1958123.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTP
                     ADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            complement(2521..3495)
                     /gene="ghrB"
                     /locus_tag="OQQ57_003497"
     CDS             complement(2521..3495)
                     /gene="ghrB"
                     /locus_tag="OQQ57_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HCS1958124.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKPSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(3599..4258)
                     /locus_tag="OQQ57_003498"
     CDS             complement(3599..4258)
                     /locus_tag="OQQ57_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HCS1958125.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            4411..6744
                     /gene="bisC"
                     /locus_tag="OQQ57_003499"
     CDS             4411..6744
                     /gene="bisC"
                     /locus_tag="OQQ57_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin sulfoxide reductase"
                     /protein_id="HCS1958126.1"
                     /translation="MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQ
                     SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVHVSWDEALDLIHQQHKRIR
                     EAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
                     ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYA
                     VFASYLLGESDGIAKTAEWAAGICGVHAAKIRELAALFHQNTTMLMAGWGMQRQQLGE
                     QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRCSAVLSSMQGSLPGGSDAVDK
                     IPVARIVEALENPGCAYQHNGMNRLFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
                     DVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQL
                     IEMPENPDSERFIRFADFCRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEP
                     DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDALARGIQD
                     GDTVRLWNARGQILAGVVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
     gene            complement(6713..7153)
                     /locus_tag="OQQ57_003500"
     CDS             complement(6713..7153)
                     /locus_tag="OQQ57_003500"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1958127.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDSKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
                     EVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(7150..7713)
                     /gene="tag"
                     /locus_tag="OQQ57_003501"
     CDS             complement(7150..7713)
                     /gene="tag"
                     /locus_tag="OQQ57_003501"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HCS1958128.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            7871..8569
                     /locus_tag="OQQ57_003502"
     CDS             7871..8569
                     /locus_tag="OQQ57_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HCS1958129.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTN
                     NSDYLYTMGVSARF"
     gene            8797..9999
                     /locus_tag="OQQ57_003503"
     CDS             8797..9999
                     /locus_tag="OQQ57_003503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958130.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHI"
BASE COUNT         2427 a         2434 c         2591 g         2666 t
ORIGIN      
        1 ttttttagga ttatatcaag gagaagaaac aaacttatta agctagaata gctacgggtg
       61 cttgagactg tttgtctcag gtattcaccg aaaggcagac agagaaaagc cccacctgac
      121 tataaatcaa agtgaggcta ccctatgcct gaacaccata aggttagcct cttactcgtt
      181 ggaaatcaac acagggggct gggaatgccg caaaaatacg gattactttc attaatagtg
      241 atttgtttca cgcttttatt tttcacctgg atggtaagag attcactgtg tgaattgcat
      301 attaaacagg ggcgttatga gctggcggca tttttagcct gcaatttaaa agagtaagag
      361 tcttcggcgg gaaattattc ccgcctttct tacggcgttg cgcattctca ttgcacccac
      421 atttattctt cacaaaaata ataatagatt ttactacgcg atcgattatt tatttcctga
      481 aaaaaaataa aaaaaatccc cgccaaatgg cagggatctt agattctgtg cttttaagca
      541 gagattacag gctggttacg ttaccagctg ccgggccttt agcgccgctt tcgatggtga
      601 aggacacttt ctgaccttcg tccagagatt tgtaaccatc gttctggata gcagagaagt
      661 gtacgaacac atctttagag ccatcgtcag gagtgatgaa gccgaagcct ttgtcagcgt
      721 tgaaccattt tacgatacca gtcattttac cggacatagt gtattacctt taataattaa
      781 gtgtgccttt cggcgatatg gcgtgcttta cagattttga agcgttaaag gaatgtgcac
      841 tacgaggggt atcaacgata actcttgaag ggacttgcct tactacactg ctttaatggt
      901 ctgtacgtca aaccgttgat gtgcattaag ccacgcattg gcgggtgatg caacaattat
      961 ttttcatatt tatgattaat cggttggaaa acggtcctgt catcaggacc gtaaacagca
     1021 ataaagtgga taaaagtcta ttccatcaac tgcttactta atgccgggtt ggcttgaatc
     1081 aaacgcatca attttagttc ggcacttgaa ggcttcacgc gtctggattc ccattccttt
     1141 accatggcga ctgatatgcc caaaacccgg gcgaaatcat cgatttttaa ccctgtccct
     1201 tttcgtaact gctcaatttc ggtacaggac gttgttctgt gcgtcagggt aattttctgc
     1261 gtttcatctt taaaaacaat ctgttccagg ctgctcaaca gctcatgcat tggatcttta
     1321 tattccattg aaaactcctc aaatcacact gcgggatcgt gaattgcatc gaagctcatt
     1381 aagaatagtc gggaaaagca gacacagcgg ggtgaagtca gggcatgctc tggctatgat
     1441 tcgattcagc cagtcattta gcgtgactta tagccaccta acgatctgat aaatgccgat
     1501 atatctctta ccactcctgt tttgtaaaga tttcgaaaat ctaaagttct gcgaaggcgt
     1561 aaatctcggg ctacaaaaaa gcaacggcaa tatcattttt taacaatgaa acaacaaatt
     1621 aaccttgttt cattttctcc atgattttac caggaagatt acgtagaaag ggtatcctgc
     1681 aagcctgtcc tggactatcc ttgtcacgtc agacacgcgt gtgtcgttgt gcgctttttt
     1741 tgggtgaaag gagtaagaaa atggcgacag gaaagtcctg ctctcgctgg tttgcgcctc
     1801 ttgcggcgtt attaatggta gttagcctga gtgggtgttt tgataaagaa ggcgatcagc
     1861 gtaaagcgtt tatcgacttc ctgcagaata cagtgatgcg tagcggtgaa cgtctaccaa
     1921 ccctgactgc cgatcagaaa aaacagtttg gtccttttgt ctctgattac gcgattctgt
     1981 atggttattc tcagcaggtg aatcaggcga tggattccgg tctgcgcccg gtcgtagaca
     2041 gcgttaacgc aattcgcgta ccgcaggatt acgttacgca aagcggtccg ctgcgtgaaa
     2101 tgaacggttc gctgggtgtg ctggcgcaac aactgcaaaa tgcgaagttg caggccgatg
     2161 ctgcgcactc tgcgctaaaa cagaccgatg atttgaaacc ggtctttgat caggcattca
     2221 ccaaagtggt aacgacgcca gctgatgcat tgcaaccgtt gattccggtt gcacaaactt
     2281 tcacgcaaca actggtgatg gttggagact acattgctca acaaggtact caggtgagct
     2341 ttgtagcaaa tggtatccag ttcccgactt cgcagcaggc aagtgaatat aacaaactga
     2401 ttgcgccgtt accggcacaa catcaggcgt ttaatcaggc ctggactaca gcagttactg
     2461 caacccaata aagagtaaaa gcccgagcga ttatcgggct ttacttcacg cagtcgcggc
     2521 ttagtccgcg acgtgcggat tcacacagtt cttctcaacc tttccttgta acgcatcaat
     2581 caaattatcc acggcacagg cggccatgcc ataacgcgtc tcatgggtgg cagatccaat
     2641 atgcggtact gcgacgacgt tggccattga gagcaacggc gaatctacgg acagtggctc
     2701 ttgttcgaag acatccagcc cggcggcgtg aatttcgcct ttctgcaatg ctgcgatcag
     2761 tgcattttcg tcaaccaccg ggccacgtcc ggcattaatg aaaatggcgg agggtttcat
     2821 tttggcgaat tgttctgcgc caaacagatg atgcgtctca tcagttaacg gcaggatcag
     2881 gcaaacgaaa tctgactctt gtaacagagt atccaaatcg cagtagcggg cgttgaagcg
     2941 ttcttctgct tctttatggt ggcggcgcgc gttatagagg atgggcatgt tgaagccaaa
     3001 gtgcgcacgt tgtgccagcg ccatgccgat ccgtcccatc ccgacaatgc ccagtgtttt
     3061 atggtgaacg tcagtgccgt accagtccgg gcctatgctc gcggtccatt cgcctgcttt
     3121 tacccgttct gctacctcca caacccgacg agcggtagac aacaccagcg ccatcagcgt
     3181 atcggcgacg gtttctgtta atacggttgg cgtgtgcatc agcagaattt ttcgggcggt
     3241 aagcgcatcg acatcaaaat tgtcatagcc gacggagatc gttgatgtgg cacgcagttt
     3301 cggcattttt tccagcaatg cggcatctac attctcgttt gaacccagta aaccttcagc
     3361 ttcggcaaaa attgctgcat tttgttcgac ggtttgtggg ctgaggtttg ccacctggtg
     3421 aacggtgaaa tgctcttgca ggcgttgcag taaatcatca ggtaaggctt tgtagaggat
     3481 aacggacggc ttcatgcttc tctccattca ctgataaggc gctcacctta gcctgaaata
     3541 tgatgaagga aaactgaaga atgccaggtg atttctgcat cacctggcat gaaagggatt
     3601 acagcgggct taaggtaatt tctacacggc ggttttgcgc cttaccttct gcggtgctgt
     3661 tgctggcgat tgggttagcc gggccaaggc cctgagtacg gatgcggctg gcgtccacgc
     3721 cctgggtgat caacgcgctg gcaacggaat ccgcacgctg ctgggagaga cgcatgttca
     3781 ggtcgtgacc ccccgtgctg tcggtataac caatcacgtt aaccgccgtt ttcggatact
     3841 ctttcagcac cattgccacg ccggtcaggg tgttagcgcc tgccggtttc agggtcgcgc
     3901 tgctgctgtc gaaggtcaca ttgttcggca tattgaggat aatgttatcc ccgctgcggg
     3961 ttacgctaac accagtgccg cgcattttgt cacgcagctt cgcttcctgc acatccatgt
     4021 aataacccac gccgccgccc agagctgcgc ctgctgctgc gccaatcagc gcgcctttac
     4081 cgcgatcttt cttcgaagaa gagagcgcac caatacccgc gcccacgaga gagtccagac
     4141 ctgcgccgat agcagatttg cctgcttcgc gttcgccggt gtaagggtta gttgtgcagc
     4201 cagataccgc cagagcgcca ctcactacgg cggcaataag ataaacacgt ttcttcattg
     4261 ttaatcctta ataacctttt tattctttgc cacgggttcc gtggcgggag attatgccgc
     4321 gtgaacatga agattattcc tgggaatact cggaaatttg taagtaatat ttaactgctc
     4381 aatacatcta acctttcagg agtcttcggt ttggccaact catcctcacg atattccgtt
     4441 ctgactgccg cccactgggg gcccatgctg gttgaaaccg acggcgaaac cgtgtttagc
     4501 tcgcgtggcg cgttagccac aggaatggaa aactccttgc agagcgcggt tcgcgaccag
     4561 gttcacagca atacgcgggt acgatttcca atggtgcgca aaggctttct cgcgtcaccg
     4621 gaaaacccgc aaggcattcg tgggcaggat gaatttgttc acgtgagttg ggatgaggcg
     4681 ctggatctta ttcaccaaca acataaacgc attcgtgagg cttatggtcc ggcatcgatt
     4741 tttgctggtt cctacggctg gcgttcaaac ggcgtgctgc ataaggcctc gacattatta
     4801 caacgctata tggcgctggc aggcggttat accgggcatc tgggggatta ttcgaccggt
     4861 gcggcacagg cgatcatgcc gtatgtcgtg ggtggcagcg aagtttatca acagcaaacc
     4921 agttggccgc tggtgctgga acatagcgat gtcgtggtgt tgtggagtgc taacccactc
     4981 aatacgctga aaattgcgtg gaatgcatct gatgagcagg ggctttctta cttttccgca
     5041 ctgcgtgaca gcgggaaaaa gctgatctgt attgatccaa tgcgatcgga aaccgtcgat
     5101 ttctttggcg ataaaatgga gtgggtggca ccgcacatgg gcaccgatgt tgcgctgatg
     5161 ctggggatcg cccatacgct ggtggaaaat ggttggcacg acgaagcgtt tctggcgcgt
     5221 tgcaccacag gttatgccgt cttcgcctct tatttgctgg gcgagagtga cggaatagcc
     5281 aaaaccgccg aatgggcggc agggatttgt ggggttcacg cagcgaaaat tcgcgagttg
     5341 gcggctcttt tccaccaaaa cacgaccatg ctgatggctg gctggggaat gcagcgccaa
     5401 cagcttggtg agcaaaaaca ctggatgatc gtcacgctgg cggcaatgtt ggggcaaatc
     5461 ggcacacccg gcggcggttt tggtctttct tatcattttg ccaatggtgg taatcccacg
     5521 cggtgttctg cggtgctctc ttccatgcag ggtagcttgc cgggtggcag cgatgcggta
     5581 gataaaatcc ctgttgcccg tattgttgaa gcactggaaa accctggctg cgcataccaa
     5641 cacaatggca tgaatcgcct cttcccggat attcgcttta tctggtgggc gggtggcgcc
     5701 aacttcaccc atcatcagga cactaatcgc ctgatacgag cttggcaaaa accggagctg
     5761 gtagttatct ccgaatgctt ctggacggcg gcggcaaaac acgcggatat cgttctgcct
     5821 gcgactacct cttttgagcg taatgatctc accatgaccg gcgattacag taatcagcat
     5881 ctggtgccga tgaagcaagt ggtgccgcca cgctatgaag cgcgtaatga ttttgatgtt
     5941 tttgccgagt taagtgaacg ctgggagaag ggcggttatg cacgttttac ggaaggaaaa
     6001 agtgagttgc aatggctgga aacgttttat aacgttgccc gacagcgcgg ggcaagccag
     6061 caggttgaat tgccgccatt tgctgagttc tggcaagcca atcagttaat tgagatgccg
     6121 gaaaacccgg acagcgagcg gtttattcgc ttcgctgatt tttgccgcga tccgcaggcg
     6181 catccattaa aaaccgccag cggtaagatt gaaatcttct cgcagcgtat tgccgattac
     6241 gcttatccgg attgcccggg gcatccaatg tggctggagc cggacgaatg gcagggcaat
     6301 gccgaaccgg aacagttaca ggtactttct gctcatccgg cgcatcgtct gcacagccag
     6361 ctgaattaca gttctctgcg cgaattgtat gcggtggcaa atcgtgagcc tgtcaccatt
     6421 catcctgacg atgccctggc gcgcggcatt caagatggcg atactgttcg gctgtggaac
     6481 gcacgcgggc aaattcttgc cggagtggtc attagcgagg gaattaaacc tggcgtgatt
     6541 tgtattcacg aaggggcatg gccggatttg gatttaaccg ctgacggtat ttgtaaaaac
     6601 ggcgcagtca acgtgctgac caaagatctc cccagctcgc ggctggggaa tggctgtgcg
     6661 ggtaatacgg cgctggcatg gctggaaaaa tacaacggtc cggaactgac acttacagcg
     6721 tttgaaccac cggccagctc ataatccagg tgggtagttg ggtttcatcc tgccatgcgc
     6781 aatcgacaat gtgaaaaccc tgcgcttggt aaaaatttat cgccggttga tttttttgat
     6841 aaacctccag catcaggtgg ggatggcgct gctgcacata ttgcatcagc gccttaccaa
     6901 taccgcgcct gacggccttc ggtgcgacaa acatcgctgc cagaaatcgg ccttccataa
     6961 tgctgacaaa accgagaagc ttactgtctt cttcccagac ccagttttgc gcattggcaa
     7021 gatacgcatc ccgcaccagc ggaatgcaat cacgccagta attcgctttt ataaagggat
     7081 gtccccaggt tgtactttcc agccacagtt cgaggatcgc ggggagttct gaacgttgcg
     7141 cttcccgaat catggtttat ttcccggata gcaacagcag ccaaccacat gatcattcac
     7201 cagcccacat gcctgcataa aggagtaaca gattgtggta ccgacaaact taaaaccacg
     7261 ttttttcagt gctttagata gggcgtcgga ggcgggcgta gatgtgggga tttcgctcaa
     7321 cgttgtggct tgtgtcacct gtggctgatg atttacaaac gaccagacaa agtcggcaaa
     7381 cggttcgccg ttctgttcca tttgcaggta cgcccgcgca ttaccaataa ttgcctgaat
     7441 tttcccgcga tggcggataa tcccggcgtc ctgtaccagt ctttcgacat cctcttcctg
     7501 cattgctgcg accttcaccg gatcgaactg atgaaagcag gcgcgatagt tttcgcgttt
     7561 tttgaggacg gtgatccacg ataacccagc ctgctgccct tcaaggcaga tcatttcgaa
     7621 cagtttttta ctgtcagttt caggcacgcc ccactcatta tcatggtagg caatataaag
     7681 cgggtcctga ctcacccagc cgcaacgttc catactttcc ctcgctatgt acccgatcgt
     7741 aaaaatttca gccgcttttc ttgacgcatc ggtgaaaaag tcaatattta atacagggct
     7801 actatgcccg atatccttca tacaatgaca ataatattgc cgaattcggc tcttccctgg
     7861 agtcgtgtta atgatcataa aaaaaagcgg tggtcgctgg cagctaagcc tgctggcgag
     7921 cgtggtaatc agcgcctttt ttctcaacac agcttacgcc tggcaacaag aatatatcgt
     7981 tgatacgcaa cccggacatt ccacagagcg ttacacctgg gatagtgatc atcaacctga
     8041 ttacaacgat attttgtcgc aacgtattca aagtagccaa agggcgctgg gactggaagt
     8101 caatctggcg gaagaaactc ctgtggatgt gaccagcagt atgagtatgg gctggaattt
     8161 tcctttatat gaacaggtta caaccggccc ggtcgcggca ttacattacg atggcacaac
     8221 cacctcgatg tataacgagt ttggcgacag tactaccacg ctgaccgatc cgttatggca
     8281 tgccagcgtg agtagcttag gctggcgtgt tgactcccgg cttggcgatc tccgaccctg
     8341 ggcgcaaatc agctataacc agcaatttgg cgagaatatc tggaaggcgc aatcaggcct
     8401 gagccggatg acggcgacaa accagaacgg caactggctg gatgtcaccg taggcgctga
     8461 tatgttgctc aatcaaaata ttgccgccta tgccgcgcta actcaggcag aaaataccac
     8521 taataatagc gactatctgt atacgatggg ggttagcgcc agattttaac gtaacagtca
     8581 caattgaaac cattgaataa caatagttgt ggtgatagtg ggtgctaact tacaaataat
     8641 aaatttggtg aataattgtc gcgtcattca ttcctgaact aaggcatttc attccgttct
     8701 gatggcattt catgccgttt ttccccaggc ataaaatgca cttcgttatg gttgtcggca
     8761 gagatttttc ctttttatta ctgcaggaat actgccatga caccttcaaa ttatcagcgt
     8821 acccgctggc tgacactcat cggtactatc attacccagt ttgcgctggg gtcggtttat
     8881 acctggagcc tgtttaatgg cgcgctttct gccaagctgg atgcgccggt aagccaggtc
     8941 gctttctctt tcggcttgtt aagtctgggg ctggcaattt catcttctgt tgcggggaaa
     9001 ttacaggaac gttttggcgt taaacgcgtc actatggctt ccggcatttt gctaggatta
     9061 ggcttcttcc tgacagcgca ttctgacaac ctgatgatgc tgtggttaag cgccggtgtg
     9121 ctggtcggtc tggcggatgg cgcgggttac ctgctgacgc tctctaactg cgtgaagtgg
     9181 ttcccggagc gtaaaggtct gatctccgcg ttcgctatcg gttcttatgg tcttggtagc
     9241 ctgggtttca aatttatcga cacgcagctg ctggaaacgg tgggtctgga aaaaacattt
     9301 gtgatttggg gagcgattgc gctggtgatg attgttttcg gcgcaacgtt aatgaaagac
     9361 gcaccaaaac aggaagtgaa aaccagcaat ggtgtggtgg agaaagatta cacgctggca
     9421 gagtcgatgc gtaaaccgca gtactggatg ttagcggtaa tgttcctgac tgcctgcatg
     9481 agcggcctgt acgtgattgg ggtagcgaaa gatatcgccc aaagtctggc acaccttgat
     9541 gtggtttccg cagccaatgc agtaacggtt atttccatcg ctaacctttc aggtcgtctg
     9601 gtgctgggca ttctgtctga caaaattgcc cgtatccgtg ttatcaccat tggtcaggtg
     9661 atttcgctgg tgggtatggc ggccctgctg tttgcaccat taaatgcagt gacgttcttt
     9721 gcagcgattg cctgcgtggc atttaacttt ggcggcacta ttaccgtctt tccatcactg
     9781 gtcagtgagt tcttcggcct caataacctg gcgaaaaact acggtgtgat ttacctcggt
     9841 ttcggtatcg gtagcatttt tggttcgatt atcgcctcac tgtttggcgg tttctatgtg
     9901 accttctacg tgattttcgc cctgctgatt ctgtcattgg cgctttctac gacgattcgt
     9961 cagccagagc agaaaatgtt gcgtgaggcg catatttaga aatatgttgc tactgaaata
    10021 aatacgagga gggagacttc aaagtctccc ttttttatgg acgcatatta aaagaacaat
    10081 aatattcata ccacaaatat attttattta tatattat
//
LOCUS       DAJVUK010000154        10001 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.154, whole genome shotgun sequence.
ACCESSION   DAJVUK010000154 DAJVUK010000000
VERSION     DAJVUK010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10001
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.154"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(266..1609)
                     /gene="gdhA"
                     /locus_tag="OQQ57_003504"
     CDS             complement(266..1609)
                     /gene="gdhA"
                     /locus_tag="OQQ57_003504"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HCS1958131.1"
                     /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK
                     YRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSESEVMRFCQALMTELYRHLGA
                     DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTK
                     EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVGAAHQ
                     LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG
                     WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
     gene            1845..2117
                     /locus_tag="OQQ57_003505"
     CDS             1845..2117
                     /locus_tag="OQQ57_003505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HCS1958132.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
     gene            complement(2083..2490)
                     /gene="nudG"
                     /locus_tag="OQQ57_003506"
     CDS             complement(2083..2490)
                     /gene="nudG"
                     /locus_tag="OQQ57_003506"
                     /EC_number="3.6.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
                     /protein_id="HCS1958133.1"
                     /translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDES
                     QQQALVRELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
                     WCSPEEALQYPLAPTDIPLLEAFMALRAARAAD"
     gene            2577..3188
                     /locus_tag="OQQ57_003507"
     CDS             2577..3188
                     /locus_tag="OQQ57_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416272.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HCS1958134.1"
                     /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
                     FLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFIL
                     AAPEQNALAGGWLLFAFISTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
                     ILLFVLGCLFPAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ"
     gene            complement(3197..4504)
                     /gene="ynjE"
                     /locus_tag="OQQ57_003508"
     CDS             complement(3197..4504)
                     /gene="ynjE"
                     /locus_tag="OQQ57_003508"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YnjE"
                     /protein_id="HCS1958135.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALY
                     GNDKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAGARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS
                     ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK"
     gene            complement(4571..5224)
                     /locus_tag="OQQ57_003509"
     CDS             complement(4571..5224)
                     /locus_tag="OQQ57_003509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCS1958136.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     STLKGTARRNAVKDALDRAGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRELAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
     gene            complement(5224..6760)
                     /locus_tag="OQQ57_003510"
                     /pseudo
     CDS             complement(5224..6760)
                     /locus_tag="OQQ57_003510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(6733..7899)
                     /locus_tag="OQQ57_003511"
     CDS             complement(6733..7899)
                     /locus_tag="OQQ57_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1958137.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVNTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPVV
                     WDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            complement(7909..8457)
                     /locus_tag="OQQ57_003512"
     CDS             complement(7909..8457)
                     /locus_tag="OQQ57_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HCS1958138.1"
                     /translation="MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVAD
                     WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            complement(8457..9164)
                     /locus_tag="OQQ57_003513"
     CDS             complement(8457..9164)
                     /locus_tag="OQQ57_003513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HCS1958139.1"
                     /translation="MMKMQSRKIWYYCITLIILLFAMLLAWALLPGVHEFINRSVAAF
                     AAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLS
                     WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
                     DPISYAAGLTSIRFRSFFISTGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV
                     VIFMAKKIWLERQKRND"
     gene            complement(9179..9855)
                     /gene="ydjY"
                     /locus_tag="OQQ57_003514"
                     /pseudo
     CDS             complement(9179..9855)
                     /gene="ydjY"
                     /locus_tag="OQQ57_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
     gene            complement(9860..>10001)
                     /locus_tag="OQQ57_003515"
     CDS             complement(9860..>10001)
                     /locus_tag="OQQ57_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HCS1958140.1"
                     /translation="RFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKN
                     EG"
BASE COUNT         2386 a         2721 c         2584 g         2310 t
ORIGIN      
        1 atatctgctg ctatcgcaga aagttaacgg atgctgaact tgaagcgtgt tatcgttacg
       61 acaagcagtt ttgggagcac tacagtaaga aatgccgttg gcccataaga aatgttccct
      121 ggggagcatc atccgttaaa tactcataaa cgcctgaaat tttgccgggg gcgctgcgct
      181 tgcccggcct acattagagc gtaactgcaa tgaattgtgc ccatttgtag gcctgataag
      241 cgtagcgcca tcaggcattt acaacttaaa tcacaccctg cgccagcatc gcatcggcaa
      301 ccttcacaaa accggcaatg ttcgcgccct gcacgtagtt ggtttgctca ccttcaccac
      361 catgctcaac acaggcatgg tggatatcca gcatgatgtg atgcaaacgt gcgtcaactt
      421 tctcggcttt ccagcccagg cgcgcagcgt tttgcgccat ttcaaggcct gacgttgcta
      481 caccgccagc attagccgct ttacccggtg caaacagtac gcctgcctgc tggaacagtt
      541 cagtcgcttc gatggtggtc ggcatatttg ccccttcggc gacggcttta acgccattgg
      601 cgataagctg atgcgcggcg ccaacatcca gttcgttctg ggtggcgcaa ggcagggcga
      661 tatcaaccgg tacagaccac ggctgttggc cttcgagata gaccagacca aattctttgg
      721 cgtaatctgc cactcgacca tcgcggctgg ctttgatttc gataagacgt gccagtttct
      781 ctttcgtgaa tccgctttca tcaactacag tgccgctgga gtctgacgca gtgatcacac
      841 gagcaccaaa ttccatcgct ttttcgatag cgtactgggc gacgttgccg gagccagaaa
      901 cggaaacgcg catcccttca aaacccatac cgtggcgttt taacattgct tctgtgaaat
      961 aaaccagacc gtagccggta gcttccgggc gaataagact accgccaaat gaaaggccct
     1021 taccggtgaa gacgcaggcg gtattgttgg agagcttttt catcatcccc gccataaagc
     1081 cgacttcacg accaccaacg ccgatatcac ctgccggaac gtcagtatcc gcgcccagat
     1141 gacgataaag ctcggtcatc agcgcctggc agaaacgcat cacttcgctt tcgcttttac
     1201 ctttcgggtc aaaatcgcta ccgcctttac caccgcccat cggcagggta gtcagggcat
     1261 ttttgaaggt ttgttcgaag ccgaggaatt tgagaatgga gaggttaact gacggatgga
     1321 agcgcatacc gcctttgtac gggccgatgg ctgagctgaa ctgcacacgc catgcacggt
     1381 tgacctgtac ctggttgcga tcatcaaccc ataccacgcg aaactggatc acgcgctccg
     1441 gttcaaccag acgctccagt aatgacatct ggcgatattt tggattttgt tcaagaaaag
     1501 gccagagtgt ggtcattact tcacgaacgg cttgcgcgaa ctcggtttga ttcgggtcgc
     1561 gcttttggac atggttgagg aatgactcca gagaatatgt ctgatccata gatataaaac
     1621 ccttatatat taatacgatt gtgcttatgt tgtttatgtc atgtgctttt gcagttttcg
     1681 actataccat caagaatgtg acggtaagca agaaaaaaat gacccaggaa agcaaattaa
     1741 taacgagagt aatctcataa ccaaatgcga taactcagac gctaaagttt tgccacccgg
     1801 ctaccgttat cagttgcaga gacaataacg ttaaggagtt ccctgtgagt cgagcattgt
     1861 tcgccgtagt attagcattt ccattaattg cactggctaa cccgcattat cgtccggacg
     1921 tggaggtaaa cgtaccgcca gaagtgttca gttcaggcgg gcagtcagcg cagccctgta
     1981 ctcagtgctg cgtttatcag gatcaaaatt attctgaagg ggcggtaatt aaagccgaag
     2041 gaatactgct gcaatgccag cgggatgaca aaacccttag cactaatccg ctgctctggc
     2101 ggcgcgtaaa gccataaacg cctctaatag tggaatgtca gtaggggcca gcggatattg
     2161 cagcgcctct tcaggtgagc accagaccag cgcctgatgt tcatgtgcct gtaacgtccc
     2221 gtggaagtcg ggtacgtgcc aggcatgaag atggataatc cggcccgaaa cttctcgctg
     2281 atggctggca acatactcac ccacagttgc ttcgatgccc aattcttcgt ttaactcacg
     2341 caccagtgcc tgctgctggc tttcatccag ctcgacttta ccaccggcaa actcccataa
     2401 tcccgcctga tcgctctggg cggggcgttg cgcgagtaaa attttgccat cacgttcaat
     2461 gatggcggca acaacttcaa tcattttcat aaattacaca cgggcagata agcgaaaaat
     2521 gccataatat ccgcactgtt gctcaatcag aaaggcttta tatttaagga gtgcctgtgc
     2581 tagaccgcca tcttcatccc cggattaaac cgttgttgca tcagtgcgtg cgggttcttg
     2641 ataaaccggg cattacgcca gatggtttaa cattagtggg atttgccatc ggcgtgctgg
     2701 ctctgccgtt tctggcgctg ggctggtatc tggcggcgct agtcgtcatt ttgttgaaca
     2761 ggctgcttga tggtctggac ggtgcgctgg cgcggcgcag agagcttacc gacgcgggcg
     2821 gctttcttga tatttctctc gattttctct tttacgcgct ggtgccgttt ggctttattc
     2881 ttgctgcacc ggagcaaaat gcgctggcag gcggctggtt gttgtttgcg tttatcagca
     2941 cgggcagcag ttttctcgcc tttgctgcac tggcagcaaa acatcagatt gataaccccg
     3001 gttatgcaca taagtcgttt tactatctgg ggggattaac cgaaggcaca gaaacgatct
     3061 tactgtttgt gctgggatgt ttattccctg catggtttgc gtggatcttc ggtgcgttgt
     3121 gctggatgac gacctttacg cgggtgtgga gtgggtatct gacgctgaag tcgctccagc
     3181 gtcagtaatt gcaatgttat ttgctactgt ccgggccgcg ttcaccggtt gctaccggat
     3241 tttttggatc gctgctccat tcgtaccagc cgccgtcata cacggaaaca ttcttccaac
     3301 ccatggcgcg tgcgtacata aaggtttcgg acgcgcgcca gccggtgccg cagtagaatg
     3361 aaacttgctg ctctggtttg atattccacg ctttccacat agcggtaata tcatcggcgc
     3421 tgcgcatggt gccatccggg ttatgaaaat cttccatatg cgtcgagtcg ctaccagcgt
     3481 gtccccaacg tgctccggct atttcacctt ttggtttaat atagctgtaa ccgctggtcg
     3541 taccgataaa ttctggccat gaacgaatgc tcaccagcga tgcatcctgg cgatgcagca
     3601 gtccacgggc ctgttccata tcgagcatca actgcggttg tgccgggatc ttcacgccga
     3661 aatccggttc cgctttcact ttcggtggcg ttcctcgctc aacaggcagt cccgcgtcgg
     3721 accaggtttg ccagccgcca tccagcagac gcacatcttt cacgcctgcg tagagcataa
     3781 tttgcgccac acgcgctcca gcgtatacgt cacgcccgta cagaatgacc gtggtgtcat
     3841 ggcgaatgcc gtgttttgcc agcatcgctt ttagttgttc atcagaaact ttgttccaca
     3901 gcggttcgct ttccacttcg ttggtatcga tgtagtcagc accgggaata tggctgataa
     3961 ggtaaagctt aggagcgccc caggccgctt caatgacttt ccagtcaccg gcaggtttcg
     4021 ccgtaacctc tttaccttgt tgcaggtcgt gcagccattg cggataaacc agctgctcaa
     4081 agtgcggcag tttttgtaga cgggaaggtt cgcttagcgc gtcactcaga atggagatat
     4141 gcgtaaaacc tgctttttgc agtcgcgttt tgacggcgtc gacatctttg tcattaccgt
     4201 acagcgccac cggggcatcg gctttcaggt tatgttgctt gatccacgcg ttgagctgtt
     4261 cggtgctcat tttgtcgagc cagctggcag agaggtttaa ggcggcaggt tcatgaccag
     4321 aagggccatt taaggtttgt ggccagccgt tataaaacgc gctggggcga gtatctatcg
     4381 ctttgccatt ttgttgttga agctggtcaa gtgtaagagg cttcgccagt tcagcggccc
     4441 acgaagaagc gcaagccagc cctaaagcca ttgccagcgc ggtcatttga gaaacacgtt
     4501 tcatcgaaaa tcccgacatt gtagttttga gtgcgccatt ctgaactgac gcattgagaa
     4561 aaactttgcg ttatcgcagt ttgttgtaat tttctgacca ctgcgccata tccagaacag
     4621 aactatcagc aggaacatcc tggagatcgt gcgttacctg aacgacgggg atcgccagtt
     4681 cgcgaacttc gctgaacacc cactggcgaa aattatcgcg cagagccaca tcaagacggc
     4741 tgaatggctc atccaggagt aacgcttttg gctgagcgag aagggcgcgc agcagggcca
     4801 cccgcgctcg ctgaccgcct gataatgtcg cagggtcctg gtgataagtt tcagccagtc
     4861 ccgctcgatc aagcgcgtct ttcacggcat tgcgcctggc agtccccttg agcgtcgacg
     4921 gtagcgccag cagtaaattt tgcccgacgc tgaactggtc aaataacagt gcatcctgga
     4981 aaagaatgcc aatctgacgc tgtgcggtgg gtagcatgtc aatccgttgc tcattgagcc
     5041 atagctcacc tgtacaagaa aactgtccag ccagtgcacc aatcatccat gaaaacagag
     5101 tggattttcc acagccagac ggccccatta acgtgacgat gtcaccttta tcaaccgtaa
     5161 agttaacgtt tgtcagcaag cggctttctg gtaaacgtag cgaaacattt ttcacgcaga
     5221 gcattagcgg agtccttgtc tgacataacc tacccatttt gcgactaacg cggtcagggc
     5281 aaaaataata agcggtaaca acagttgcca taaagcctgg gcggcgagaa taccgttgct
     5341 gccgccgctg cttaatgcca ccgcctcagt ggtgagcgtc ggaaaacgcc ccgcgcccag
     5401 ccacagcgtc ggcatatact gcgcaatact gactgaaaat cccaccgcga aggcaatcag
     5461 cacagggcgc aacatgagtg tgcatttcac gtaaaagaag attttggccc gctaccagcc
     5521 cagtgtttgt gcaatcaaaa ttaaccgtga atcaatgcgc tgccaggcgg gttgcaggat
     5581 aaacagcatc cacggcatta cccacagcag atgcccccag accaccgccg tccagcttcc
     5641 atccaggttc agccatagcg ccagcgtgta ctggcccgcc accagtggca gagcgggcaa
     5701 tagaatgggc aaccatagcc acaactggcg acgctgtggc ccccattcca gccacagcag
     5761 taacaggagc aaagcgatga atgttgctac cagccccatt gtcagactgt tgatgagtgc
     5821 ttcactattg atcgtcgact gatccgcgag gatcgccagc agaaccacac acagcacacc
     5881 ggttaagggt aaaaaactcg ccagcgtagt gcctggtaat aaaggtgtgg caggcattgc
     5941 gaatgccatc tacgcgggga atagtgcgcc gccagctgcg ccatagcaga tagctcagca
     6001 aaacgtaggc ggcgagtaac agcatcagca gcagactggc gagtgcgcct ttcgtttgtt
     6061 gatccgcgtc gccctgagtt aaccactgcc agctaattac tgccagcgtc ggtggattac
     6121 ctggcccaag aataatcgcc acatccacga ccgaaagcga ccaggcaaca atcgccagca
     6181 tcgccattgc cagcgaaggc gcgacggagg gcaacagcag ccagttcagg cattgccagc
     6241 ggctgtagcc cagcgaatcc agcacaatga cctgctgcaa cagccgtttt tcgctcaata
     6301 ctgccgctaa gatccacagc agaaatgcgc tttctttcac tgcaagggtg aggcccagac
     6361 cgatgccaaa tcggtccatt ggcggagtga aatacgggaa atagtcatat agcagccctc
     6421 cgtcagcaaa gagcagcagg gcgctggtgg caaaagccac atggggaatg gcgagcagcc
     6481 acggcagacg ggcgcacata cgctgccatt tcggcccagg ccatagcgcc acaatcacca
     6541 gcagggcaat caacaatgcc ccgaccgccg cgatggttgt cgacaccagc gttgccagta
     6601 atgcatgcgg taactgtgga tcggcaaata acgcctgcca gtgtgtcaac gacaacgcag
     6661 gcgatatcag cgtgagagct gccgggatca gcggtgcata aatcaccgcc accatcgccc
     6721 acagcaaaaa gattaatgcg taccgtaacg gcgtaaccat tcttgttcca gtgcattcac
     6781 ccatcctgcg tgcggttcag ccagtaccgg cggcagatcc tgcggcattc ttgattgcaa
     6841 tatttcgcgc tgcccgtcag gcagtttttg cggatcgaga acagaaggat cgtcccagac
     6901 aacgggatct gctttacgca gttgcgcatc gggtgagagc agaaaattgg caactacctt
     6961 cgccgcagca ctggcattcg cgttggctgg aatggtgacg aaatgcacgt tgccaatcat
     7021 cccctcgcga aagccaaaac tgtaactgct tgccggcaaa tcgccgctgg cgattttttg
     7081 ctgcgcatgc gcggggttaa aggtcagcga caggcgcaat gtgccggctt tcagcagagc
     7141 atccatccgc gcgggcgaag gcgggaaatc ctttccttcg cgccacaaat acggatgcag
     7201 tgcatcaaga tattgccaca agggcgcagt gacacgggcg aaagtcgcat cgtccggcgc
     7261 ttcttttaat gcggcgggat ctggcgtcag cataatcagc aactgttcaa gaaacgccgt
     7321 gccggtaaag tccggtgggc gcggataagt aaccgtgccg ggattggctt tagcaaactc
     7381 cagtaaggct tgcggcgttt gtggtggctg tggcgtaaca tcgcggcggg cgataaacgt
     7441 cagttgtgcg ccgccccagg gcgattccgc accttgtgtc ggcactgaaa aatcttcccg
     7501 caccggcagc tgtgtgttga catagcgcca gttgggcaga gtctccgccc agcccgtttg
     7561 taataaattg gcctctttta aggtgcggaa gttttcgccg ttcacccaga gcagatccac
     7621 cgagccgccc gttttacgac cggcagcagc ttcggtctga atgcgcttca ccgcgtctgc
     7681 ggcatccgcg agacgaacaa tcttcaggtt tatagcgtaa tgggttttca tctcgccgct
     7741 aacccagtcg agatagcggt taattgcggt atcgccgccc caggcgttaa accagacggt
     7801 ttgccctttg gcctcatttt taatttcctg ccagtcactg gcatgtgttg ccaaagaaaa
     7861 cagcgataac aatcccagca accacccaca atggcgcatc ttctctcctt aagaacgttt
     7921 ttccggaata cggcacagcc cctgagcggg aatgtccatg gcagaattaa aacgagccga
     7981 caggttttgc aggccgatca atgccgtcag ttcggtgagc gcctgagcgt caaaatgcgc
     8041 agccagtcgg gtacgcaggg catcatcgac tgttggcggt gtgacgcttg cggcttcggc
     8101 gtactccagc gccagccgtt cttcatcgct aaagagcggg ctttgccgcc agtcagccac
     8161 tgccagcagt ttatcggtgc tgccggtacg ctcggcgact ttcatactgg tgatatccac
     8221 acaaaactca cacaggcaca tttgcgcaat gcgcgcgctg acaagcgatc gcactaccgg
     8281 atcgagcggt gagcgtttgc gctccagcca cccaacaaac attgacacca aataaaagat
     8341 aaacgggatc cgcccccacc agcgaatcgg gcttagcacc tcgccgtaat ggcgacgatg
     8401 cagccacgcc tgcggacgta aaatgaaagg aattttgcta agcggcggta aacccatcag
     8461 tcattcctct tctggcgctc aagccatatt ttcttcgcca taaaaatcac cacggtcagg
     8521 gcaaacagaa taaacagtcc ggtgacaaac cagaaagtac cgcctgttaa catgctgccc
     8581 gcccaggaat aaacaatagt cgccggtaat tgaccaagcc cggtggagat aaaaaacgag
     8641 cgaaaacgta ttgaagtcag accggcagca tagctgattg gatcgaaagg gacaaaaggc
     8701 aataaccgac agaccaggat ggtgtgtttg ccgtagcgag tgaaaaagcc gtccatactg
     8761 tcaagcacgg ttttgccggt taatttttcc accacttcgc ggcccatcac tctggcgata
     8821 aaaaagcaca gcgccgcgcc ggccatcgaa ctggtccacg acagcaagcc gccccagaac
     8881 gcgccaaaca gcgacgcatt ggcaaaggtg atcaaaaacg caggtagcgg tgcagcaatg
     8941 gcctgtaaaa tcatcaacaa gaacgagaca actgccgcca gtgcgccgta agactgaata
     9001 aagcgttcta taccctgttg gtccacggcg gcaaacgccg caacgctgcg attgataaac
     9061 tcatggacgc cgggaagcag cgcccatgcg agcagcatag cgaacaacag gatgatgagg
     9121 gttatacagt agtaccagat tttacgcgat tgcatcttca tcatccttta tcctggcttt
     9181 attcggtgat tttaaaggta accgttgcca gcgtgttatc cgccgggaga actgaggcat
     9241 tgcctttgaa tttcacttcg ccgcgttttt ccaccgcacc ataagtgtat gttgcattgc
     9301 tgacgatgcc gaccgggcag ctatccagac acaccagtca acccgttttc ttctcttctg
     9361 ctgccgttaa attaccgcca aagcgcatgt ccagtttctt gccattactg tcaacaatca
     9421 cttcatcgaa ggaatacgct tttgccgccc cttgccagtt gaccgaaata tccagtttgc
     9481 tgcctgtgac atgagtcgtt tctttattat ccatcgtcat gttttcgccc ggcgtaccac
     9541 ctgctctttc agggcttcat aaaatgcttt cggggtcgca taagccataa acagcgattt
     9601 atgtccgttg gagccatctt taaacacaat accgtgacga gtgtcgtcgg tgaggaaacg
     9661 accattaatt tgcaccagca tggttaccgt atggttattg gcatcgacgc gcagcggttg
     9721 gctgttcgaa agtccgtcgt attccacttt tgccgccgaa ttctcttttt gatcgcagcc
     9781 gctaagcccg gcaacagcca gtaagcagag tgcagccagt ccttttttcc atgacactga
     9841 ataatgttgc gacatcgttc tatccttcat tttttgggtg agtaagcggg ctgcggcgcg
     9901 aagcagacag atccacatgt ttgtgtcggg cgtagagttt tgcgagctgg acgagaataa
     9961 acagcgccag gcccgccaga cagagttgta aaataaagcg c
//
LOCUS       DAJVUK010000155         9998 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.155, whole genome shotgun sequence.
ACCESSION   DAJVUK010000155 DAJVUK010000000
VERSION     DAJVUK010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9998
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.155"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(40..1035)
                     /gene="gapA"
                     /locus_tag="OQQ57_003516"
     CDS             complement(40..1035)
                     /gene="gapA"
                     /locus_tag="OQQ57_003516"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HCS1958141.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
     gene            1377..1790
                     /gene="msrB"
                     /locus_tag="OQQ57_003517"
     CDS             1377..1790
                     /gene="msrB"
                     /locus_tag="OQQ57_003517"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HCS1958142.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
     gene            1832..2104
                     /locus_tag="OQQ57_003518"
     CDS             1832..2104
                     /locus_tag="OQQ57_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HCS1958143.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(2265..2906)
                     /gene="pncA"
                     /locus_tag="OQQ57_003519"
     CDS             complement(2265..2906)
                     /gene="pncA"
                     /locus_tag="OQQ57_003519"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HCS1958144.1"
                     /translation="MPHRALLLVDLQNDFCAGGALAVPEGDSTVEVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG"
     gene            complement(2917..3933)
                     /gene="ansA"
                     /locus_tag="OQQ57_003520"
     CDS             complement(2917..3933)
                     /gene="ansA"
                     /locus_tag="OQQ57_003520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HCS1958145.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            complement(4100..5956)
                     /gene="sppA"
                     /locus_tag="OQQ57_003521"
     CDS             complement(4100..5956)
                     /gene="sppA"
                     /locus_tag="OQQ57_003521"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HCS1958146.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6117..6668
                     /locus_tag="OQQ57_003522"
     CDS             6117..6668
                     /locus_tag="OQQ57_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HCS1958147.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTPFVTYF"
     gene            6785..7828
                     /gene="selD"
                     /locus_tag="OQQ57_003523"
     CDS             6785..7828
                     /gene="selD"
                     /locus_tag="OQQ57_003523"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HCS1958148.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            7833..9794
                     /gene="topB"
                     /locus_tag="OQQ57_003524"
     CDS             7833..9794
                     /gene="topB"
                     /locus_tag="OQQ57_003524"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HCS1958149.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEVGSGAIA"
BASE COUNT         2505 a         2467 c         2649 g         2377 t
ORIGIN      
        1 accgaagtcg ctctttttag atcacagttt catctcaact tatttggaga tgtgagcgat
       61 caggtccaga actttgttgg agtaaccggt ttcgttgtcg taccaggata ccagtttcac
      121 gaagttgtcg ttcagagcga taccagcttt agcatcgaac acggaagtgc aaacttcgcc
      181 gttgaaatcg gtagatacta cgtcatcttc ggtgtagccc agaacgcctt tcatttcgcc
      241 ttcagcagcg gctttaacgg cagctttgat ctgctcgtaa gttgcagctt tttccagacg
      301 aacggtcagg tcaactacgg atacgttcgg ggtcggaacg cggaacgcca taccagtcag
      361 tttgccattc agttctggca gtactttacc tacagcttta gcagcaccgg tagaggacgg
      421 gatgatgttc tgggaagcgc cgcggccgcc gcgccagtct ttgtgagacg ggccatcaac
      481 ggttttctga gtagcggtag tagcgtgaac ggtggtcatc agaccttcga tgatgccgaa
      541 gttatcgttg ataactttag ccagcggagc caggcagttg gtggtgcagg aagcgttgga
      601 aacgatgtcc tggccagcat atttgtcgaa gttagcgcct ttaacgaaca tcggagtgtt
      661 gtctttagac ggaccagtca taaccacttt cttcgcacca gcggtgatgt gtttacgagc
      721 agtttcgtca gtcaggaaca gaccagttgc ttcagcgaca acgtcaacac caacttcgtc
      781 ccatttcagg ttagccggat cacgttcagc ggtaacacgg atttttttac cgttaacgat
      841 cagatgaccg tctttcactt caacggtacc gtcgaaacgg ccgtgagtgg agtcatattt
      901 cagcatgtat gccatgtaat cagcgtctaa caggtcgttg attgcaacga tctcgatgtc
      961 agaacgtttc tgagcagcac ggaaaacaat gcgaccgata cggccaaaac cgttgatacc
     1021 tactttgata gtcatatatt ccaccagcta tttgttagtg aataaaaggt tgcctgtaaa
     1081 attacaaaaa ccttacgcag cgtcaagcgg aatcgtgtca atcattgcga caaatcaatc
     1141 ctgtgcctaa gcattatgcg actgactcgc ctcactcttc ctttgggctt gaaaccacat
     1201 ggggtcggcg ccccgaattt taaagggcaa ttacgataaa aatgtgattt tcatcacgat
     1261 ttaggtgcag ccatttcgtc gagatcaagt ttaggacaaa attttgccag ttggtgttaa
     1321 tgttttgtta gaatcagtca cgtaatgtga gcacgattaa agtgagatgt gagcaaatgg
     1381 ctaataaacc ttcggcagaa gaactgaaaa aaaatttgtc cgagatgcag ttttacgtga
     1441 cgcagaatca tgggacagag ccgccattta cggggcgttt actgcataac aagcgtgacg
     1501 gcgtatatca ctgtttgatc tgcgatgccc cgctgtttca ttccgaaacc aagtatgatt
     1561 ccggctgtgg ctggcccagt ttctacgaac cggtgagtga agaatccatt cgttatatca
     1621 aagacttgtc acatggaatg cagcgcatag aaattcgttg cggtaactgt gatgcccatc
     1681 tggggcatgt ctttcccgac gggccgcaac caacaggcga acgttattgt gttaactctg
     1741 cttctttacg cttcactgat ggcgaaaacg gcgaagaaat caacggttga aaaaacgatt
     1801 cagcaactta ttccacagga gcggaaaaat tatgaatctt gatgacatta tcaacagcat
     1861 gacgcctgag gtataccagc gtttgtcgac cgccgttgaa ctggggaaat ggcctgatgg
     1921 cgttgcgttg accgaggaac aaaaagagaa ttgcctgcaa ctggtgatgc tgtggcaagc
     1981 ccgccataat accgaagcac agcatatgac aattgacaca aatggtcaga tggtcatgaa
     2041 gagcaaacag cagttaaaag aagattttgg tatctcagca aagcctattg ctatgtttaa
     2101 gtgaatgagt tatctagtat ttaagcctgt tattaaggga gggcaaatat acttgttcgg
     2161 acgtcgtgtt ttagctgcaa gtaggttaaa tgcaacactg acaagtatta tctggcctac
     2221 aatgtcattg aggaaatgta ggccagagat gaattcaact aatattaccc ctgtgtctct
     2281 tcccagtctg ccagcgtata tagcgttgcc ccagctgctg acatctccat aaacgcgtgt
     2341 gcactgtcct ggggctggat attcacgcca cgacaaccat cggtaatcac gttcacctta
     2401 taacctaact gtaacgcgtc cagcacggta aacttcacgc aatagtcagt agccaggccc
     2461 ataacgatca attcatcgat ttcatgatcg cgtaaccagt catcgagaga ggttttctgc
     2521 cgacggccgt tatcaaaaaa ggcactgtaa ctgtcaacta aaggattttc gcctttatgg
     2581 aacaccgctg cgatcgcttt ttggttcagt aacggatgta attgtgcgcc ttcactgttc
     2641 tgcacacagt gatctggcca gaaggtttgt ggcaaaccgt cgagttggcc tggcgtataa
     2701 ggctctacac cgtgctgact ggcaaaactg ccgtgattcg ccggatgcca gtcctggctg
     2761 gcgataaccg cttctccgcg cgactggcac cagtcaataa ggcggttagc aacctccacc
     2821 gtactgtcac cttccggtac ggcgagcgcg ccaccagcac agaaatcatt ttgtaaatcg
     2881 accagtaaca gggcgcgatg gggcattgca gtctccttaa tcatccggcg tcagttcgcc
     2941 gcgcaggttt tggctcatgg ccttgcgaat ggtttcagta tccagttcct ggctcagcag
     3001 gtaatgcagt ttggttagcg tggcttctac agtcatatct gcaccgccaa taacgccggc
     3061 atgggcgagg gcgttaccgg tggcataacc acccatattc actttaccgg acatacattg
     3121 tgtcaggttg accaccacaa taccgcgatc gctggcttct tgtaattcct gcaggaaggc
     3181 tttgttttgt ggcgcattac ccacgccata ggagcgcaga atcaatgctt tcactggttg
     3241 gcgcagaaaa ttgcgcacga catcagcaga aatccccgga taaatcgtca ctacgccaat
     3301 tggttgtggc gtgattggat gaacgattaa ttccccttca ccgtgcgggg cgggtggcgt
     3361 attcaaacga cgaatatgga taccagcttc cagtaacgga ggaaggtttg gagaggcaaa
     3421 cgcatcaaaa ccatcggcat gggctttggt agtgcggttg ccgcgataca atcggttatt
     3481 gaaaaagagc gttacttcgt tgatcggata attcgccgca acgtacaacg cattcagcag
     3541 attaatttgt ccgtcagagc gtaactcagc cagcgggatt tgtgaccctg tcacaatgac
     3601 cggtttaccg agattctcga gcatgaacga cagcgcagag gcggtatacg ccatcgtgtc
     3661 ggtaccgtgt agaatgacaa aaccatcata gtcgtcatag tgcgctttaa tatcttcagc
     3721 aatatgctgc cagtcatccg gcgtcatatc agaagaatcc atcaacggcg tatattcatg
     3781 aatggtgaaa tctggcatct ccgggcgatg gaattccggc atcagcgcca gttggcgttg
     3841 tagatgacct gacaccggaa tataaccctg ctcggaacgc tgcatcccga tggtcccgcc
     3901 cgtgtaggcg acgtaaattg atttcttttg catgatattg atatgaatga tatcgaaaga
     3961 gcaaaagtat atacgtgagg caggaggagc gcacctgata ctatgcggat aaggaaatat
     4021 ggggcgagac agcgggaaga ggattcgtcg aggtaaaaaa taatgtggcc gacgatctgt
     4081 cggccactca gtacaagact taacgcacgt tggcgcaggt caggcaaaac gcataacggt
     4141 tttgtgggtc gttaaacgcg gccagcttgt cgctttcact tttaacggta gaggctaccg
     4201 aggcaagcgg tgcaggtaac atggcctgga acgcatctgg caacattgcc cggacagaac
     4261 cagacatgtt gtccatcact ttgtcgaaga aggtcggttc atcaacgtag tattccagat
     4321 gccactgttt cacttttgcg agctctgctg ctttggcaac cgcatcatcg aaatccccga
     4381 gactatcgac cagcccgtta gcttttgcat cctgaccggt ccagacgtgg ccctgggcga
     4441 ttttatcaat ttgctccggc gtcgaatgac gcgcatcagc aaccagcgtg ataaagcgtt
     4501 tatagccatt ctcaatgctt aattgcatca tctgctgcgc ttccggcggc agtgccctgg
     4561 tgatagaaac atccgccagc ggtgaagttg agacaccatc agtatgaaca ccaatcgaat
     4621 ccagactatt ttctacggtg gtgatcacgc cgaagatacc gatagaaccg gtcagggtgc
     4681 tggggttagc cacaatgtaa ttagctggcg tggaaatcca gtaaccacca gatgccgcca
     4741 tgccgcccat cgatacaacc acaggcttac ccgctgcccg ggctgctgcc agttcagcgc
     4801 gaatcacttc agacgcggta acgctgccgc ctgggctatt aacacgcagg acaatcgctt
     4861 tcactttcgg gtcaaggcga gcgtcgcgga tttgtgccgc agtggtatca ccgccaacat
     4921 tcccctgagt ttcctcgcca tccataattg cgccattagc gaagacgaca ccgatgctgt
     4981 caccggtatc tgccggcgtt ttcaatgcgt aatcgtaata actgatggcg cgataatttt
     5041 tatcagtctt actccagccg aactctttgg tcagagcttt ttcgatttcg gcactcgatg
     5101 ccagtgcatc gaccagcttg ttttccagtg catatttcgc ggtatcgcca ccggttttgg
     5161 ttaaaccctc aagcaaccct tgcgcgctag ggaatacctg ctgagcaggg atctgccggt
     5221 tagcggcaac agtattcaga tagttttgcc acagctcacc aatccagcgg ctgtcagctt
     5281 cgcgggctgc cggtgacata tcatcacgaa taaacggttc aacggcagat ttatacgtac
     5341 ccacgcggaa cacatgggtg gaaactttca gcttatccag caacgatttg tagtacagac
     5401 cgttggtagc aaaaccgtgc agatcaacca cgccttgcgg tgacagccaa attttattgg
     5461 cgaaactggc gagataatat tgcccctggc tgtagttctc gccaacggca taaaccggtt
     5521 tcccgctgtc acgaaactct ttcagggctt tgccgatgta ctgcatagac ggctggtcgc
     5581 cgcctgcgaa gtttttcaga tccatcacga taccggtgat attgtggtcg tccttcgcct
     5641 ggcgaatggt gttgacgata tcaaacagtg agttttcctg cagacgatcg gaactggcac
     5701 caagcagctg gcggcttaat ttactaaacc gctgagaact gtcgggttta tcgacgatca
     5761 caccggaaat gtccagcagc agtgcgccac gactggccgt ttctttcgaa tcaccaccac
     5821 tgacctgcat ccagatcccc acaccaacca gtacgaggaa aataaagaac aggttaagta
     5881 ccatttcacg gacgaaattc agcagacgcc acgtccattt aaaaaatccg gcaataaatc
     5941 gccaaagggt tcgcatgtat tctcccaact taaggtcaca cctgtcacag gcgcaataga
     6001 tgtggttatc gtaatgaccc aaccgacact tgtcagcagg aattgcggac tgtgctgtaa
     6061 caaaatccac tctcgtgtta attttgtgaa taaatatcac gacaggagtt aatcaaatgg
     6121 atgcactcga actattgatc aatcgccgta gcgcctcccg cctggctgaa cccgcgccaa
     6181 cgggtgaaca actgcaaaac atcctgcgtg cgggtatgcg tgcgccggac cataagtcca
     6241 tgcaaccgtg gcattttttt gtgattgaag gggaagggcg cgagcgtttc agcgccgtac
     6301 tggaacaggg ggcgattgct gccggtagtg atgacaaagc tatcgacaaa gcccgtaatg
     6361 cgccgttccg cgcaccgctc atcatcacgg tggtggcgaa atgcgaagaa aatcataaag
     6421 tcccgcgatg ggaacaggaa atgtctgccg gatgcgcggt catggcgatg caaatggcag
     6481 ccgttgccca gggatttggc ggcatctggc gcagtggcgc attaactgaa agtccggtag
     6541 tgcgtgaagc attcggttgc cgtgagcagg ataaaattgt cggttttctc tacctcggca
     6601 cgccgcagtt gaaagcatct acgtcgatta acgtcccgga cccgacgccg tttgtaactt
     6661 atttctgata attgtcgcga aactgtctgg attgtgagca aaggcgcagg aattcagaca
     6721 ctctcactta tcacttcacg gaatgagggt taccataccc ggattgcatt gacaggagat
     6781 gtccatgagc gagaactcga ttcgtttgac ccaatacagc cacggagctg gttgcggctg
     6841 taaaatttcc ccaaaagtgt tggaaaccat cctgcacagt gagcaggcga agtttgttga
     6901 tccgaatttg cttgtgggta atgagacccg cgacgatgcg gcggtgtacg atctgggcaa
     6961 tggcaccagc gttatcagta ccaccgactt ctttatgccg atcgttgata atcctttcga
     7021 ttttggccgc attgcggcga ctaacgccat cagcgatatc ttcgcgatgg ggggcaaacc
     7081 gattatggcg attgcgatcc tcggctggcc gattaacaaa ctttccccgg aaattgcccg
     7141 cgaagtaacc gaaggtggac gctatgcatg ccgtcaggcg ggtattgcgc tggctggcgg
     7201 tcactccatc gatgcgccgg agccgatttt tggtctggcg gtaacgggga tcgtaccgac
     7261 cgagcgggtg aagaaaaaca gcaccgcaca agccggatgc aaactgttcc tgacgaaacc
     7321 gctggggatc ggcgttctta ccacggctga gaaaaaatca ttgctgaaac cagaacatca
     7381 gggactagcg acggaagtga tgtgccggat gaacatcgca ggcgcgtcct ttgccaacat
     7441 cgaaggcgta aaagcgatga ccgacgttac gggctttggt ctgctgggcc atttgagcga
     7501 aatgtgtcag ggcgcaggtg tgcaggcgcg cgttgactat gacgcgatcc caaaattgcc
     7561 gggggttgaa gagtacatta agttgggcgc agtgcctggc ggcaccgaac gtaactttgc
     7621 cagctacggt catctgatgg gtgaaatgcc gcgtgaagtg cgcgatttgc tgtgcgatcc
     7681 gcaaacttct ggcggtttgc tgctggcggt catgccggaa gcagaaaatg aggtcaaagc
     7741 tacagccgcc gagtttggca ttgaactgac ggcaattggc gaactggtgc cagcgcgcgg
     7801 cggtcgtgcc atggttgaga ttcgttaatt caatgcggtt gtttattgcc gaaaaaccga
     7861 gtctggcgcg cgccattgct gatgtcctgc ccaaaccgca ccggaaaggc gatggcttta
     7921 tcgagtgcgg taatggtcag gtggtgacct ggtgtatcgg tcacctgctt gagcaggcgc
     7981 agccagacgc ctacgacagc cgctatgcgc gctggaatct tgcggatttg ccgattgtcc
     8041 cggaaaagtg gcaattacag ccccgaccct ccgtgaccaa acaacttaac gtcatcaaac
     8101 gcttcctgca tgaagccagc gaaatcgttc acgccgggga cccggatcgt gaagggcaac
     8161 tgctggtgga tgaagtgctg gactatctgc aactggcacc ggaaaagcgc cagcaggtgc
     8221 agcgttgctt gataaacgac ctgaacccgc aggcggttga gcgggcgatc gaccgtcttc
     8281 ggtccaacag tgagtttgtg ccattgtgcg tttctgcgct ggcgcgagcg cgtgccgact
     8341 ggctgtacgg catcaatatg acccgtgcgt ataccattct cggtcgcaat gccggttatc
     8401 agggcgtact ttccgtggga cgcgtgcaga cacccgtgct cgggctggtg gtgcgccgcg
     8461 atgaagagat tgaaaacttc gtggcgaaag acttctttga agtcaaagca catatcgtga
     8521 cacctgccga tgagcggttt accgctatct ggcaaccgag cgaagcgtgt gaaccgtacc
     8581 aggatgaaga agggcgcttg ttacatcgtc cactggcgga gcatgtggtt aaccgcatta
     8641 gtggtcaacc agcaattgtc accagctata acgataaacg ggaatcagaa tccgcgccgc
     8701 tgcctttttc gctttcggcg ttgcagattg aagcggcaaa acgctttggt ctgagcgcgc
     8761 agaacgtgct tgatatctgc cagaagctgt acgaaacgca caagctaatc acttatccgc
     8821 gttccgattg tcgctatttg ccagaagaac attttgccgg acgccacgcg gtgatgaatg
     8881 ccatcagcgt tcatgcacca gatctgttgc cgcaaccagt ggtagatcca gatatacgca
     8941 accgctgttg ggatgacaaa aaggtcgatg cacaccacgc catcatcccg accgcacgga
     9001 gttctgcgat caacctgacg gagaacgaag cgaaggtcta taacctgatt gcccgtcagt
     9061 acttgatgca gttctgcccg gatgcggtgt tccgcaagtg tgttatcgaa ctggacattg
     9121 ccaaaggcaa atttgtcgct aaagcgcgtt ttcttgctga agcaggctgg cgcacgctgt
     9181 taggcagcaa agagcgcgat gaagaaaacg acggtacgcc attgcctgtg gtggcgaaag
     9241 gcgatgagtt gctgtgtgaa aaaggtgaag tggtagagcg gcaaacccag ccgccgcgcc
     9301 attttaccga tgcaacactg ctttcggcga tgaccgggat cgcgcgcttt gtgcaggaca
     9361 aagatctgaa aaagatcctt cgtgcgaccg atggtctggg gacagaagca acccgtgccg
     9421 ggattattga actgctgttc aagcgtggtt ttctgaccaa aaaagggcgc tatatccact
     9481 ctaccgacgc cggaaaagcg ttattccatt cgctgccaga aatggcgacg cgaccggaca
     9541 tgaccgcgca ctgggaatcg gtgctgacgc aaatcagcga aaagcagtgt cgctatcagg
     9601 actttatgca gccgctggtg gggacgctat atcagcttat tgatcaagcc aaacgtacgc
     9661 cggtgcggca gtttcgcggc attgtggctc cgggcagtgg tggcagtgct gataagaaaa
     9721 aggctgcacc gcgtaaacgt agtgcgaaaa aaagtccgcc agcagatgaa gtcggaagcg
     9781 gggcgatagc gtaagcgagt gaatctttcg tgctattcga gtcatattct gaaatatcca
     9841 gcgaatcaag aaaattcgtt ggatattttt ttgcatggat aaaattatcg cctctaaagt
     9901 atgtaataac agggaatgtg atgaaaaaag ttttattaca aaaccatcct gggagcgaga
     9961 agtattcttt taatggctgg gaaatattta atagtaat
//
LOCUS       DAJVUK010000156         9956 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.156, whole genome shotgun sequence.
ACCESSION   DAJVUK010000156 DAJVUK010000000
VERSION     DAJVUK010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9956
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.156"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            259..456
                     /locus_tag="OQQ57_003525"
     CDS             259..456
                     /locus_tag="OQQ57_003525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958150.1"
                     /translation="MEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSK
                     VMIISLFDSTVMPDKYRHNGK"
     gene            complement(406..1599)
                     /locus_tag="OQQ57_003526"
     CDS             complement(406..1599)
                     /locus_tag="OQQ57_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958151.1"
                     /translation="MSPGIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPECKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFVTDTTAISQQVAWLLGLSAVAALIAQFGV
                     VRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRTIK"
     gene            1735..3459
                     /gene="iucA"
                     /locus_tag="OQQ57_003527"
     CDS             1735..3459
                     /gene="iucA"
                     /locus_tag="OQQ57_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HCS1958152.1"
                     /translation="MTLPSEKPATDVAAQCFLNALIRETTDWKLTEYPPDELLIPLDE
                     QKSLHFRVAYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHVHTQQAIDARHDWAALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            3460..4407
                     /gene="iucB"
                     /locus_tag="OQQ57_003528"
     CDS             3460..4407
                     /gene="iucB"
                     /locus_tag="OQQ57_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HCS1958153.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            4407..6149
                     /gene="iucC"
                     /locus_tag="OQQ57_003529"
     CDS             4407..6149
                     /gene="iucC"
                     /locus_tag="OQQ57_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HCS1958154.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFVEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDATSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMAERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            6146..7483
                     /gene="iucD"
                     /locus_tag="OQQ57_003530"
     CDS             6146..7483
                     /gene="iucD"
                     /locus_tag="OQQ57_003530"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HCS1958155.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVITLESSGPGWRLLMEHHLDQGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTANIQE"
     gene            7489..9684
                     /gene="iutA"
                     /locus_tag="OQQ57_003531"
     CDS             7489..9684
                     /gene="iutA"
                     /locus_tag="OQQ57_003531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HCS1958156.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLRYYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
BASE COUNT         2395 a         2565 c         2645 g         2351 t
ORIGIN      
        1 cataaaaaac atgtcagtga aaaagaaacc tggcgttggg ttgaaggata taataaagca
       61 acagaactgg ctcgccaatg ccctgatacc catgtattgt caatttctga tcgtgaaggc
      121 gatttttatg acctgtttga acgcgcagag cagactcccg gaataaaagc tgactggctt
      181 gtcagaatga aatttaataa cagagcaacg ctgaatatta atggtaaacg ggatcatagg
      241 ttgttgcacg aaagaatcat ggagattaca ccgcagcaac tggttgaatt cactatacct
      301 gatgggcggg ggcagcaagc cagaacactg cctgacatgc tttcatcaga cgcaggtcct
      361 ctctcatatc ctctgattta ctccagtaag gtgatgatca tatctttatt tgatagtacg
      421 gtaatgccag ataaatacag acacaatggt aaataatata gttgcaaata atgctgccat
      481 aatcagcgcg attgcgacac ctgttttcga taccagcggc accagcaaag cgcacagtcc
      541 atagccaagt gtgtgactgg tagcgagcca gcccgcgcct gcgccatcag ccagcttatc
      601 attcagtaga agttgataag cgggtgttgc cagagctgct ccaaatgaca gcactgcaca
      661 gcccgggtaa aacaaccata gctgttcgga gagcatgata gccagaccac cactcatcaa
      721 cactccggca ctcaggagca gggccaccgg agtcaggcgc tgcggacgga ctaccccgaa
      781 ctgcgcgata agcgcagcta ctgcggacag acccaacagc caggccacct gttggctaat
      841 ggcggtggta tccgtgacga actggcgagt aagggcaggc gaaagtccaa gctgcatcat
      901 gctcaccgcc gcagccagta atattgcgca aagcagataa ggcagacaat cccgcttcag
      961 actgacgctc ttgcactccg gtgtgggctg tggtggtgtg ccgggcaacc gcagcagcat
     1021 cagcagcgcc agcactggtg ctgccatcag tagccccagt ggcgccagag gatgaatggc
     1081 cagcattgct gccgcgcaca gcggcccgaa tagcctgccg caactcaggc cggagctgat
     1141 ggttgccaga gcggccatgc gattcccttc tccagctctc tgcaatgccc agacctgaca
     1201 ggctggcacc attgccgaca cggtcagccc gtaggcgatc cgggcgatga ttaatattcc
     1261 cagtcccacc gctgttgtta tggcgctggt agccatcagc acgcttccca gccctagcag
     1321 ggtaaagctt atgccatatc ctcccagagc ccacaacacc acaggtttac tgccagtacg
     1381 ggaaatttgc tttccccacc acggggacga tggcagaaac agcattgagc caagcatcag
     1441 cagggcagcc catacagaca gactcagatt tgtctgtatg accagaacag ggagcacaac
     1501 cagcagaccg ttctgtccga taccgagaag cccggcactg aacgcaagtg gccagcagga
     1561 cagtgttttt tggggcgtat cttcgatccc tggtgacatt ataatgcttc aactccatgt
     1621 attaattgtg tttatttgta aaattaattt atctgacaat aacatttatt gttgataatg
     1681 agaatcatta tcgacataat tgttattatt ttactgtgtg ggagctgttt gactatgacc
     1741 ctgccctctg aaaaaccagc cacagatgtg gctgcgcagt gcttcctgaa tgcactgatt
     1801 cgtgaaacca cagactggaa actgacagaa tacccgccag acgaattgct catcccgctg
     1861 gatgagcaga aatcgctcca tttcagagtg gcttatttct ccccaaccca gcatcaccgc
     1921 tttgcatttc ctgcacgtct ggtcacggca tcaggcagtt atcctgtcga ctttaccact
     1981 ctctcccggc ttattattga taagctacgc catcaactgt ttctgcccgt tcccctctgc
     2041 gaaactttcc accagcgcgt gctggaaagc catgtccata cgcaacaggc aattgatgcc
     2101 cgtcatgact gggccgctct gcgtgaaaaa gcgttgaatt ttggcgaggc tgagcaggcg
     2161 ctgctgacag gacacgcttt ccaccctgcg cctaagtctc atgaaccgtt taaccggcgg
     2221 gaggctgaac gctacctgcc tgatatggca ccccacttcc cactgcggtg gttttcggtg
     2281 gataaaacgc aaatcgccgg tgaaagtttg catctcaacc ttcaacagcg gctgacgcga
     2341 tttgccgcag agaatgcgcc tcagttactc aacgaattaa gtgacaacca atggctgttc
     2401 ccgttgcacc cgtggcaggg ggaatatctt ttgcagcagg ggtggtgcca ggcacttgtt
     2461 gctaaagggc tgattaaaga cttaggtgag gccggcacgt cgtggctgcc gaccacctct
     2521 tcccgttccc tctactgtgc caccagccgc gatatgatca agttctccct gagcgtacgg
     2581 ctgaccaact ccatccgtac tctgtccgtg aaagaagtga agcgtgggat gcgcctggca
     2641 cgcctggctc aaaccgacgg ctggcagatg ctacaggtcc gcttcccgac tttccgggta
     2701 atgcaggagg atggctgggc cgggctgctc gatcttaacg gcaacatcat gcaggaaagt
     2761 ctgtttgccc tgcgtgaaaa tctgctggtg gatcagccga aaagccagac taacgtactg
     2821 gtctccctga ctcaggccgc acctgatggc ggtgattcgc tgctggtttc ggcggtaaaa
     2881 cgcctgagcg atcgcctcgg tatcactgtg caacaggccg cccatgcatg ggtcgatgca
     2941 tactgtcagc aagtgctaaa gccgctgttt acggctgaag cggattacgg cctggtgctg
     3001 ctggcgcatc agcaaaatat tcttgtccag atgcttgggg atctgccggt cggatttatt
     3061 taccgtgact gtcagggcag cgcttttatg cctcacgcga cagactggct cgattctatt
     3121 ggcgaggcgc aggcggaaaa tattttcacc catgagcagt tgctgcgcta tttcccttat
     3181 tacctgctgg ttaactccac ttttgctgtg accgctgcgc tgggggctgc cgggctggac
     3241 agcgaatcga atctgatggc tcgtgtacga gcatcgctgg ctgaagtgcg tgatcaggtg
     3301 actcataaaa cctgtctcaa ctacgtgctg gaaagtccgt actggaacgt aaaaggtaac
     3361 tttttctgtt atctgaacga tcataacgag aacaccattg ttgacccttc ggtgatctat
     3421 ttcgatttcg ctaacccgct gcaggctcag gaggtctgaa tgtctgaggc aaacattatt
     3481 cacagcagat atggactgcg ctgtgaaaaa ctcgacaagc ccctgaatct tggctgggga
     3541 ctggacaata gcgcggtgtt gcactgtccc ggggagctgc cgacagggtg gctgtgcgat
     3601 gcgctggatc agatatttat cgccgcacca caactgtcag cagtggctct cccctgggcc
     3661 gaatggcgtg aggagccaca ggcgctgacg ctttttgggc aggtaaaaag cgacattatc
     3721 catcgtactg ccttctggca gttaccgtta tggttgagtt caccggcaaa ccgggcctcc
     3781 ggtgaaatgg tttttgatgc agagcgtgag atttatttcc cgcagcgccc accccgtcca
     3841 cagggtgagg tttaccgccg ttacgatcca cgtattcgca ggatgctgag tttccgcatt
     3901 gccgatcccg tttctgatgc agaacgtttc acccgctgga tgaatgatcc gcgcgttgag
     3961 tatttctggg agcaaagtgg ctcactggag gtacagaccg cctatctgga gcgccagctc
     4021 accggtaaac atgcattccc gctgattggg tgcttcgacg atcggccatt cagctatttc
     4081 gaaatctact gggcggcgga agaccgcatt ggtcgtcact attcgtggca gccctttgac
     4141 cgtggcctgc atctgctggt tggtgaacag caatggcgcg gggcccacta tgtgcaaagc
     4201 tggctgcgcg ggctgacaca ttacctgctg ctggatgagc cccgtacgca gcgcacagta
     4261 ctggagccac gcaccgataa ccagcgcctg ttccgccatc ttgagcctgc gggataccgg
     4321 acaattaaag agttcgactt cccacataag cgctcgcgca tggtgatggc ggatcgtcat
     4381 cacttcttca cggaggtcgg tctgtaatga atcacaagga ctgggatttt gttaaccgtc
     4441 ggctggtggc aaaaatgttg tctgagatgg agtatgagca ggttttccac gcggaatctc
     4501 agggcgatga ccactactgc attaacctgc cgggagcaca atggcgcttc atcgctgaac
     4561 gtggtatctg gggctggctg tggattgatg cccaaacgtt gcgctgcacg gacgaaccag
     4621 tactggcgca gacgctgctg atgcagctaa agccggtgct gtcaatgagt gatgccactg
     4681 ttgcagagca tatgcaggat ttgtatgcca cgctactggg cgacctgcaa ctgctgaagg
     4741 cccgtcgcgg actgagtgcc agtgacctga ttaatcttga tgccgatcgt ctgcaatgcc
     4801 tgctgagcgg tcatcctaaa ttcgttttta ataaaggtcg ccgtggctgg ggcaaagagg
     4861 cgctggaacg atatgcgcca gagtatacca acaccttcag actgcactgg ctggcggtaa
     4921 aacgtgaaca tatgatctgg cgctgcgata acgatctgga tattcagcag ttgttgactg
     4981 ccgcaatgga tccgcaggag tttacacgct tcagtcaggt ctggcaggaa aacgggctgg
     5041 atcacaactg gctaccgctg ccggtacatc cgtggcagtg gcagcaaaaa atcgccacag
     5101 acttcatcgc tgattttgtc gaaggcagga tggtgtctct cggcgagttt ggcgaccagt
     5161 ggctcgccca gcagtcgctg cgtaccctga ccaacgccag ccgccgggga gggctggata
     5221 tcaagctgcc gctgaccatc tacaacacct catgctaccg ggggatccct ggcagatata
     5281 tcgctgccgg accactggct tcacgctggc tgcaacaggt ttttgcgacc gacgccaccc
     5341 tggtgcaaag cggcgcagtg atccttggtg aaccggcggc aggctatgtg tcccatgaag
     5401 gctatgccgc gcttgcccgg gctccctatc gctaccagga aatgcttggt gttatctggc
     5461 gggagaatcc gtgccgctgg ctgaaaccgg atgaaagtcc tgttctgatg gcaacactga
     5521 tggagtgcga cgaaaacaat cagccgctgg caggcgcata tatcgaccgc tccggactgg
     5581 acgctgaaac ctggcttacg caattgttcc gggtggttgt ggttccgctg tatcacctgc
     5641 tttgccgcta cggtgtcgcg cttattgcac acggacaaaa tataacgctc gccatgaaag
     5701 agggggtacc acagcgtgtt ctgctgaaag acttccaggg cgatatgcgg ctggtgaaag
     5761 aagcgtttcc cgaaatggat tctttgcctc aggaggtgcg tgatgccaca tcccgtctga
     5821 gtgcggacta cttaatccat gatttgcaga cgggtcactt cgtgacagta ctgcgtttta
     5881 tttcgccact gatggttcgt cttggcgtac ctgaaaggcg attttatcaa ctgctggcag
     5941 cagtgttgag tgattacatg aacaaacatc cacaaatggc agagcgtttt gcgcttttct
     6001 cactcttcag gccacaaatc attcgcgtgg tgctgaaccc ggtaaaactg acctggccgg
     6061 acctggatgg cggcagtcgc atgctgccga attaccttga gaatctgcaa aatccgctgt
     6121 ggctggtaac tcaggaatat gaatcatgaa aaaaagtgtc gattttattg gtgtcgggac
     6181 agggccattt aatctcagca ttgctgcatt gtcacatcag atcgaagaac tgaactgtct
     6241 cttctttgac gaacatcctc atttttcctg gcatccgggt atgctggtac cggattgtca
     6301 tatgcagacc gtctttctga aagatctggt cagtgcagtt gcacctacaa atccctacag
     6361 ctttgttaac tatctggtga agcacaaaaa gttctatcgc ttccttacaa gcaggctacg
     6421 tacagtatcc cgtgaagagt tttctgacta tctccgctgg gctgctgaag atatgaataa
     6481 cctgtatttc agtcataccg ttgaaaatat tgatttcgac aaaaaaagtc gattgtttct
     6541 ggttcagacc agtcggggag aatattttgc ccgcaatatc tgccttggta caggaaaaca
     6601 accttattta ccaccctgtg tgaagcatgt gacacaatcc tgtttccatg ccagtgaaat
     6661 gaatcttcgt cggccggacc tgagtggaaa acggataacc gtggttggtg gaggacagag
     6721 tggtgcagac ctgttcctta atgcattacg cggggaatgg ggagaagcgg cggaaataaa
     6781 ctgggtctca cggcgtaata attttaacgc actggatgag gctgcttttg ctgatgagta
     6841 ttttacacct gaatatattt caggcttctc cggactgaag gaagatattc gccatcagtt
     6901 actggatgag cagaaaatga catcggatgg catcactgcc gattctttac tgaccattta
     6961 tcgtgagttg taccaccgtt ttgaagttct gagaaaacca agaaatatcc gtctgctacc
     7021 cagtcgctcg gtaataactc tggaaagtag tggtccgggc tggaggttat tgatggaaca
     7081 tcatctggat cagggcagag agagcctgga aagtgatgtg gtgattttcg ccacaggtta
     7141 ccgttctgca ttgccacaaa tacttccctc actgatgccc ttgatcacca tgcacgataa
     7201 gaacaccttt aaagtgcgtg atgacttcac tctggaatgg agtggcccga aagaaaataa
     7261 catctttgcg gtcaacgcca gcatgcaaac tcatggcatc gccgaacccc agctcagcct
     7321 gatggcctgg cgatctgcac gtattcttaa tcgcgtactg gggcgtgatt tattcgatct
     7381 cagtatgccg cccgcactga ttcagtggcg cagcggcagc cggaaaaaac cgcagccgga
     7441 ggctgcttct ttaactcact atacagcaaa tattcaggaa taacgatgat gcgcaaaaag
     7501 tatatgcccc gggctcttgg tccgctgctt cttgtcgtgc tgtcaccagc tgtcgcccag
     7561 caaaacgatg ataatgagat catagtgtct gccagccgca gcaatcgaac tgtagcggag
     7621 atggcgcaaa ccacttgggt tatcgaaaat gccgaactgg agcagcagat tcagggcggt
     7681 aaagagctga aagacgcact ggctcagtta atccccggcc ttgatgtcag cagccagagt
     7741 cgaaccaact acggtatgaa catgcgtggc cgcccgctgg ttgtcctgat tgacggtgtg
     7801 cgcctcaact cttcacgttc cgacagccga caactggact ctgtcgatcc ttttaatatc
     7861 gaccatattg aagtgatctc cggcgcgacg gccctgtacg gtggcgggag taccggaggg
     7921 ttgatcaaca tcgtgaccaa aaaaggtcag ccggaaacca tgatggagtt tgaggctggc
     7981 acaaaaagtg gctttaacag cagtaaagat cacgatgagc gcattgccgg tgctgtctcc
     8041 ggcggaaatg accatatctc cggacgtctt tccgtggcat atcagaaatt tggcggctgg
     8101 tttgacggta acggcgatgc caccctgctt gataacaccc agaccggcct gcagcactcc
     8161 aatcggctgg acatcatggg aaccggtacg ctgaacatcg atgaatcccg gcagcttcaa
     8221 ctgataacgc agtactataa aagtcaggga gacgacaatt acgggcttaa tctcgggaaa
     8281 ggcttttccg ccatcagcgg gagcagcaca ccatacgtca gtaaggggct gaattctgac
     8341 cgcattcccg gcactgagcg gcatttgatc agcctgcagt actctgacag tgatttcctg
     8401 ggacaggaac tggtcggtca ggtttactac cgcgatgagt cgttgcggta ctacccgttc
     8461 ccgacggtaa atgcgaataa acaggcgacg gctttctcct cgtcacagca ggataccgac
     8521 cagtacggca tgaaactgac tctgaacagc caactgatgg acggctggca aatcacctgg
     8581 gggctggatg ctgagcatga gcgctttacc tccaaccaga tgttcttcga tctggctcag
     8641 gcaagtgctt ccggagggct gaacaaccat aagatttaca ccaccgggcg ctatccgtca
     8701 tatgacatca ccaatctggc ggccttcctg caatccagct atgacattaa tgatattttt
     8761 accgttagcg gtggcgtacg ctatcagtat actgagaaca gggtagatga tttcatcgac
     8821 tacacgcagc aacagaagat tgctgccggg aaggcgatat ctgccgacgc cattcctggt
     8881 ggttcggtag attacgataa ctttctgttc aatgctggtc tgctgatgca catcaccgaa
     8941 cgtcagcagg catggttcaa tttttcccag ggggtggcat tgccggatcc ggggaaatat
     9001 tatggtcgcg gcatctatgg tgcagcagtg aacggccatc tttccctgac aaagagcgtg
     9061 aacgtcagcg acagtaagct ggaaggcgtg aaagtcgatt cttatgaact gggctggcgc
     9121 tttaccggtg acaacctgcg gactcaaatc gcggcatatt actcgctttc caataagagc
     9181 gtggaaagga ataaagatct gaccatcagt gtgaaggacg acaggcgccg tatttacggc
     9241 gtggaaggtg cggtggacta cctgatcccg gatactgact ggagtaccgg tgtgaacttc
     9301 aatgtgctga aaaccgagtc gaaagtgaac ggtcaatggc aaaaatatga cgtgaaggaa
     9361 tcaagtccat cgaaagcgac agcttacatt aactgggcgc cggaaccgtg gagtctgcgt
     9421 gtacagagca ccacttcttt cgacgtaagc gatgcagagg gtaacgatat taatggttac
     9481 actaccgtcg attttatcag tagttggcag cttccggtgg gaacactcag cttcagcgtt
     9541 gagaacctct tcgaccgtga ctataccact gtctggggac agcgtgcacc tctgtactac
     9601 agcccgggtt acggccctgc ttcactgtac gactacaaag gccggggccg aacctttggt
     9661 ctgaactact cagtgctgtt ctgacgggga tgcttttgca acaagggtat gctgtaaaca
     9721 acatggtcct tggtggccat gttgtttaca gccagtataa tatacagcct taacaagata
     9781 ttccgtctcc ggaatggact gttcaccact gaataacatt atttctgttt tatggatctt
     9841 tgactgaaat ttatcgcata tcctcatttc attgtccgtc tgaaaactaa ccttacaagt
     9901 aagcgtcgtc tcagcaccgt ctggcagatc ctgaaattcc tgagaggatg atctgc
//
LOCUS       DAJVUK010000157         9845 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.157, whole genome shotgun sequence.
ACCESSION   DAJVUK010000157 DAJVUK010000000
VERSION     DAJVUK010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9845
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.157"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(5..1288)
                     /gene="aroA"
                     /locus_tag="OQQ57_003532"
     CDS             complement(5..1288)
                     /gene="aroA"
                     /locus_tag="OQQ57_003532"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HCS1958157.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            complement(1359..2447)
                     /gene="serC"
                     /locus_tag="OQQ57_003533"
     CDS             complement(1359..2447)
                     /gene="serC"
                     /locus_tag="OQQ57_003533"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HCS1958158.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSIFNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            complement(2646..3338)
                     /locus_tag="OQQ57_003534"
     CDS             complement(2646..3338)
                     /locus_tag="OQQ57_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HCS1958159.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANP
                     EWTKASRAKRVT"
     gene            3468..5228
                     /locus_tag="OQQ57_003535"
     CDS             3468..5228
                     /locus_tag="OQQ57_003535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HCS1958160.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            5634..6491
                     /gene="focA"
                     /locus_tag="OQQ57_003536"
     CDS             5634..6491
                     /gene="focA"
                     /locus_tag="OQQ57_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HCS1958161.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
     gene            6546..8828
                     /gene="pflB"
                     /locus_tag="OQQ57_003537"
     CDS             6546..8828
                     /gene="pflB"
                     /locus_tag="OQQ57_003537"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCS1958162.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDLLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            9020..9760
                     /gene="pflA"
                     /locus_tag="OQQ57_003538"
     CDS             9020..9760
                     /gene="pflA"
                     /locus_tag="OQQ57_003538"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HCS1958163.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKGILEQYGHKVMF"
BASE COUNT         2522 a         2481 c         2343 g         2499 t
ORIGIN      
        1 tcattcaggc tgcctggcta atccgcgcca actgctcgaa ataatccgga aatgttttgg
       61 ccgtacattt gggatcaaga atcgtcactg gtgtatctga caacgccacc agcgagaaac
      121 acatcgccat ccggtgatca ttgtatgtcg cgatctcggc aaagttcagt ttttccggtg
      181 gagtgatacg aatgtaatcg tgcccctctt ctacttccgc accgacttta cgcagttctg
      241 ttgccatcgc aaacaggcga tcggtttctt taacacgcca gttatagata ttgcgcagcg
      301 tggtggtgcc ttttgcaaat aacgccgccg tggcaatggt catcgccgca tcgggaatat
      361 ggttcatatc catatcaata gcgttcagtt caccacgcgt gcaggaaata taatcatcgc
      421 cccagcaaat ggtcgcgccc attttttcca gcacatcagc aaagcgaata tcaccctgca
      481 tactgttacg tccaataccg gtcactttta cagtgccgcc tttgattgct gctgctgcca
      541 gaaagtaaga agccgaagat gcatcgcctt cgaccaaata agtacccgga gactgataag
      601 actgtccgcc ttttacgaca aattgttgat agtgctgatt ttcaatttca acaccaaacg
      661 tcttcatcag attgagtgtg atgtcgatat aaggtttaga aaccagatcg cctttaatac
      721 gaatcaccgt atcttccggc gcaagaggcg cagtcattaa cagtgcggtg aggaattggc
      781 tggaaacgga gccatcaacg tcaacgttgc cgccagtaaa gccgccctgt aaacgcaacg
      841 gcggataatt ttcttgttcc aggtaagtga tcttcgcccc gcccaggcgc agcgcatcca
      901 ccagatgacc aatcgggcgt tctttcatac gcggctcacc ggtcagcaca atatcattgc
      961 tacccagaca aagagctgcc gccagcggac gcattgccgt tccggcgtta ccgaggaaca
     1021 actccagggc accttctgcg tgtaatggac cgccgttacc gataatttcg caacgcgtac
     1081 gatcggctga aagcgtatag cttaccccta acgctgttaa tgcattcagc atatggcgca
     1141 cgtcatcgct atccagcaga ttggttaata ctgttttgcc gtgtgctaat gccgccagca
     1201 ataaagcgcg gttagaaacg ctcttggaac cgggcagatt aatagtgcca tcgacacgag
     1261 cgatgggttg taacgtcagg gattccatga actcaactct ctacaacaga aataaaaacc
     1321 ccacaggctg gctgtgggga ttaagcaaaa tttcggcatt aaccgtgacg gcgttcgaac
     1381 tcaaccatga agtctgtcag cgctttaacg ccttccagcg gcatggcgtt ataaatagaa
     1441 gcgcgcattc cgccgaccac acggtgacct ttcagtgcat gaaggccagc agcaaaagac
     1501 tcttcaagga acaatttgtc aagcgcactg tccgccaact ggaacggcac gttcatccgc
     1561 gaacggttag ctttcgccac gtcattgcgg tagaaatcgc tgttatcaat caccccatat
     1621 agcagttctg ctttttgctg attgatttta tccatttcag ctacaccgcc gttcgctttc
     1681 agccatttaa agaccagacc agatagatac caggcaaatg tcggcggcgt gttaaacatg
     1741 gagccgttat cgttgaagat ggaataatcc agtatcgacg gacacgcgat attcgctttg
     1801 cccagcaaat cttcacgaac gatgacgatt gtcaggccag ccgggccgat atttttctgc
     1861 gcgccagcgt aaatcacgcc ataacggctg acgtcaatcg gacgggaaag aatggttgaa
     1921 gagaagtcgg cggcgaccac cacatctttg ccgaagtctg gcgtttcgtc gatggcgata
     1981 ccgtcgatgg tttcattcgg gcagtaatgc atataagcag cattatcaga gagttgccat
     2041 tcacgcattg gcttaaccgc gcgcagacca tcaacagtca ctttggcgtc aaagacatta
     2101 ggcgtgcagt attttttcgc ttctttaatg gcacttgccg cccagtaacc ggcatcaaca
     2161 taatctgcgg tggttttatc accgagaata ttcagcggta ccgcagcaaa ctgaccgcga
     2221 ccaccgccat ggcagaataa taccttgtag ttggagggga cattaagaag atcgcgaaaa
     2281 tccttctcgg cttcctctgc aacctgaatg aactctttgc cacggtgact cacttccatc
     2341 accgacgtac caagaccgtt ccagtcgcgc agttcctgtt gagcctgttt aagcacctct
     2401 gccggtagca ttgccggacc agaactaaaa ttgaagattt gagccatttc ccctcaccac
     2461 gttgcgttgc tattaacccg cggtcaatcg attgcgacca caggtaatac attattcctg
     2521 tggctatcgg ttttatcatt cagtgacaca catcgcaatg agtaaaaccg ttgagggcaa
     2581 aaatgaggct tgcatcacac aaaagaatct ctcggattat tagcaaaaag ccgatgtttt
     2641 tactgtcagg tcacccgttt tgcccgactt gccttcgtcc attctggatt tgcacagcgc
     2701 ggacataatt gtttttcccc cgctttcata tgaatgattt cactacaacg aatacaggca
     2761 tagtccgccg actccggcac cactttgtaa cgctgcgtac aatcactggg taaaataagt
     2821 aaacccggtt tcaccttgtc atcttcaaag aaatagacac tgatttgccc gttggtttcg
     2881 agaatcgcca gacgtacctg ccccagctgc tccacgccac gcaatcgtag ctccataaag
     2941 aactcaaatt ccgtcatgtt ggagttattg agtttcgacc aggccagctc gccatcttca
     3001 ataataacaa ccggcttacc ttccagtaga tcttccagtt tttcactgtg cgccatcaac
     3061 cacattacca ggcggtataa caacgccaga gtgataaaga cgataagtac cggcaccatc
     3121 ggcacatcat cataaaacgc cacatctccc gccgctgaac ccagcgtgag aatgattaac
     3181 acttcaaaca gcgacatctg tcgcacaccg cgtcttccgg tcattttgag gaacaaaaaa
     3241 accagtacaa aggtataaag actacgtagt gcaacttcgc caaggaaatc aaaaggcact
     3301 ttatcaaatg ccatacggtg gagatcgaac gccttcattt ttatgctctt atcgtggttt
     3361 attcgctaaa agcatagtca acagttcatc ggcatggcgg cggtgatagc gcctttgaga
     3421 taaaacccgt attattgcgc gctttccgta cgactaaagt gattttcatg acgcaaacat
     3481 ttatccccgg caaagatgcc gctctggaag attccatcgc tcgcttccag caaaaacttt
     3541 cagacctcgg ctttcagatt gaagaggcct cctggctgaa tcctgtgcct aacgtctggt
     3601 ctgtacatat tcgcgacaaa gagtgcgcac tgtgttttac caacggtaaa ggcgcaacca
     3661 aaaaagcggc gctggcttct gcacttggtg aatatttcga gcgtctctca accaactact
     3721 tttttgctga tttctggctg ggcgaaacca tcgccaacgg tccgttcgtg cattatccca
     3781 acgaaaaatg gttcccactg accgaaaatg acgatgtgcc agaaggacta ctcgatgacc
     3841 gtctgcgcgc gttttatgat ccggagaatg aactgaccgg cagcatgctg attgacctac
     3901 aatccggtaa cgaagatcgt ggtatttgcg gcctgccgtt tacgcgtcag tccgacaatc
     3961 agaccgttta tattccgatg aatatcattg gtaacctgta cgtctccaac ggtatgtccg
     4021 caggtaatac ccgcaacgaa gcacgcgttc agggattgtc tgaagttttc gaacgctacg
     4081 tgaaaaaccg cattattgct gaaagcatca gcctgccaga gatcccggca gacgtgctgg
     4141 cgcgttaccc agcggtggtt gaagcgatcg aaacactgga agcagaaggt ttcccgatct
     4201 tcgcatatga tggttccctt ggcggccagt atccggtgat ttgcgtggta ctgttcaatc
     4261 ctgctaacgg tacctgcttt gcctctttcg gtgcgcatcc tgattttggc gtagcactgg
     4321 aacgtaccgt gaccgagctg ctgcaaggtc gtggcctgaa agatttggat gtgtttactc
     4381 cgccaacctt cgatgatgaa gaagtcgctg aacataccaa cctcgaaacg cactttatcg
     4441 attccagcgg tttaatctcc tgggacctgt tcaagcagga tgccgattat ccgtttgtgg
     4501 actggaattt ctccggcacc acggaagaag agtttgctac gctgatggct atcttcaaca
     4561 aagaagataa agaagtttat attgccgatt acgagcatct gggcgtttat gcttgccgta
     4621 ttatcgtgcc tggcatgtcc gatatttatc cggctgaaga tctgtggctc gcgaataaca
     4681 gtatgggcag ccatttacgt gaaacgattc tttcgctacc aggcagcgag tgggaaaaag
     4741 aagattacct gaacctcatc gagcaactgg atgaagaagg ttttgatgac tttacccgcg
     4801 tgcgtgagct gttgggtctg gcgaccgggt cggataacgg ttggtacacc ctgcgtatcg
     4861 gtgaattaaa agccatgctg gcgctggctg gtggcgatct ggaacaggct ctggtctgga
     4921 ccgaatggac gatggagttt aactcatcag tatttagtcc ggaacgcgcc aactattatc
     4981 gctgcctgca aacgttgtta ttactggcac aggaagaaga tcgccagccg ctgcaatatc
     5041 tgaatgcgtt tgttcgcatg tacggcgcag atgccgtgga agccgccagt gcggcaatga
     5101 gcggcgaagc ggcgttttac ggcctgcaac cggtagatag cgatctgcac gcgtttgctg
     5161 cacatcagtc gttgttgaag gcctacgaaa agctgcagcg cgccaaagca gcattctggg
     5221 caaaataaaa tcaaatagcc tacgcaatgt aggcttaatg attagtctga gttatattac
     5281 ggggcgtttt tttaatgccc cgctttacat atatttgcat taataaaata attgtaatta
     5341 taaggttaaa tatcggtaat ttgtatttaa taaatacgat cgatattgtt actttattcg
     5401 cctaatgctc ccttttaatt aactatttta gcggaggatg cggaaaaaat tcaactcatt
     5461 tgttaatttt taaaatttat ttttatttgg ataatcaaat atttactccg tatttgcata
     5521 aaaaccatgc gagttacgga cctataagcc aggcgagata tgatctatat caatttctca
     5581 tctataatgc tttgttagta tctcgtcgcc gacttaataa agagagagtt agtgtgaaag
     5641 ctgacaaccc ttttgatctt ttacttcctg ctgcaatggc caaagtggcc gaagaggcgg
     5701 gtgtctataa agcaacgaaa catccgctta agactttcta tctggcgatt accgccggtg
     5761 ttttcatctc aatcgcattc gtcttctata tcacagcaac cactggcaca ggcacaatgc
     5821 ccttcggcat ggcaaaactg gttggcggca tttgcttctc tctggggctg attctttgtg
     5881 ttgtctgcgg agctgatctc tttacttcca ccgtgttgat tgttgttgct aaggcgagtg
     5941 ggcgcatcac ctggggtcag ttggcgaaaa actggctaaa tgtctatttt ggcaacctgg
     6001 tcggcgcact gctgtttgta cttttaatgt ggctttccgg cgagtatatg accgcaaatg
     6061 gtcaatgggg actaaacgtc ctacaaaccg ccgaccacaa agtgcaccat acttttattg
     6121 aggccgtctg tcttggtatc ctggcaaacc tgatggtatg tctggcagta tggatgagtt
     6181 attctggccg cagcctgatg gacaaagcgt tcattatggt gctgccggtc gcgatgtttg
     6241 ttgccagcgg ttttgagcac agtatcgcaa acatgtttat gatcccgatg ggtattgtaa
     6301 tccgcgactt cgcatctccg gaattctgga ccgctgtcgg ttctgcaccg gaaaattttt
     6361 ctcacctgac cgtgatgaac ttcatcactg ataacctgat cccggttacg atcggtaata
     6421 ttatcggcgg tggtttgttg gttgggttga catactgggt catttacctg cgtgaaaacg
     6481 atcaccatta atggttgtcg aagtacgcag taaataaaaa atccacttaa gaaggtaggt
     6541 gttacatgtc cgagcttaat gaaaagttag ccacagcctg ggaaggtttt accaaaggtg
     6601 actggcagaa tgaagtaaac gtccgtgact tcattcagaa aaactacact ccgtacgagg
     6661 gtgacgagtc cttcctagct ggcgctactg aagcgaccac caccctgtgg gacaaagtaa
     6721 tggaaggcgt taaactggaa aaccgcactc acgcgccagt tgactttgac accgctgttg
     6781 cttccaccat cacctctcac gacgctggct acatcaacaa gcagcttgag aaaatcgttg
     6841 gtctgcagac tgaagctccg ctgaaacgtg ctcttatccc gttcggtggt atcaaaatga
     6901 tcgaaggttc ctgcaaagcg tacaaccgcg aactggatcc gatgatcaaa aaaatcttca
     6961 ctgaataccg taaaactcac aaccagggcg tgttcgacgt ttacactccg gacatcctgc
     7021 gttgccgtaa atctggtgtt ctgaccggtc tgccagatgc atatggccgt ggccgtatca
     7081 tcggtgacta ccgtcgcgtt gcgctgtacg gtatcgacta cctgatgaaa gacaaactgg
     7141 cacagttcac ttctctgcag gctgatctgg aaaacggcgt aaacctggaa cagactatcc
     7201 gtctgcgcga agaaatcgct gaacagcacc gcgctctggg tcagatgaaa gaaatggctg
     7261 cgaaatacgg ctacgacatc tctggtccgg ctaccaacgc tcaggaagct atccagtgga
     7321 cttacttcgg ctacctggct gctgttaagt ctcagaacgg tgctgcaatg tccttcggtc
     7381 gtacctccac cttcctggat gtgtacatcg aacgtgacct gaaagctggc aagatcaccg
     7441 aacaagaagc gcaggaaatg gttgaccacc tggtcatgaa actgcgtatg gttcgcttcc
     7501 tgcgtactcc ggaatacgat gaactgttct ctggcgaccc gatctgggca accgaatcta
     7561 tcggtggtat gggcctcgac ggtcgtaccc tggttaccaa aaacagcttc cgtttcctga
     7621 acaccctgta caccatgggt ccgtctccgg aaccgaacat gaccattctg tggtctgaaa
     7681 aactgccgct gaacttcaag aaattcgccg ctaaagtgtc catcgacacc tcttctctgc
     7741 agtatgagaa cgatgacctg atgcgtccgg acttcaacaa cgatgactat gctatcgctt
     7801 gctgcgtaag cccgatgatc gttggtaaac aaatgcagtt cttcggtgcg cgtgcaaacc
     7861 tggcgaaaac catgctgtac gcaatcaacg gcggcgttga cgaaaaactg aaaatgcagg
     7921 ttggtccgaa gtctgaaccg atcaaaggcg atctcctgaa ctacgatgaa gtgatggagc
     7981 gcatggatca cttcatggac tggctggcta aacagtacat cactgcactg aacatcatcc
     8041 actacatgca cgacaagtac agctacgaag cctctctgat ggcgctgcac gaccgtgacg
     8101 ttatccgcac catggcgtgt ggtatcgctg gtctgtccgt tgctgctgac tccctgtctg
     8161 caatcaaata tgcgaaagtt aaaccgattc gtgacgaaga cggtctggct atcgacttcg
     8221 aaatcgaagg cgaatacccg cagtttggta acaatgatcc gcgtgtagat gacctggctg
     8281 ttgacctggt agaacgtttc atgaagaaaa ttcagaaact gcacacctac cgtgacgcta
     8341 tcccgactca gtctgttctg accatcactt ctaacgttgt gtatggtaag aaaactggta
     8401 acaccccaga cggtcgtcgt gctggcgcgc cgttcggacc gggtgctaac ccgatgcacg
     8461 gtcgtgacca gaaaggtgct gtagcgtctc tgacttccgt tgctaaactg ccgtttgctt
     8521 acgctaaaga tggtatctcc tacaccttct ctatcgttcc gaacgcactg ggtaaagacg
     8581 acgaagttcg taagaccaac ctggctggtc tgatggatgg ttacttccac cacgaagcat
     8641 ccatcgaagg tggtcagcac ctgaacgtta acgtgatgaa ccgtgaaatg ctgctcgacg
     8701 cgatggaaaa cccggaaaaa tatccgcagc tgaccatccg tgtatctggc tacgcagtac
     8761 gtttcaactc gctgactaaa gaacagcagc aggacgttat tactcgtacc ttcactcaat
     8821 ctatgtaatt agatttgact gaaatcgtac agtaaaaagc gtacaataaa ggctccacga
     8881 aagtggggcc ttttttagca cgagagcctt ttttgtcagc tatctatact ttaaggtgac
     8941 tgccaaaaca gactcgacgt agccttcgag ctgcgcacca acacggcctc agatgggcca
     9001 catctggaga aacaccgcaa tgtcagttat tggtcgcatt cactcctttg aatcctgtgg
     9061 aaccgtagac ggcccgggta ttcgctttat cacctttttc cagggctgcc tgatgcgctg
     9121 cctgtattgt cataaccgcg acacctggga cacgcatggc ggtaaagaag ttaccgttga
     9181 agatttgatg aaggaagtgg tgacctatcg ccactttatg aacgcttccg gcggcggcgt
     9241 taccgcatcc ggcggtgaag caatcctgca agctgagttt gttcgtgact ggttccgcgc
     9301 ctgcaaaaaa gaaggcattc atacctgtct ggacaccaac ggttttgttc gtcgttacga
     9361 tccggtgatt gatgaactgc tggaagtaac cgacctggta atgctcgatc tcaaacagat
     9421 gaacgacgag atccaccaaa atctggttgg agtttccaac caccgcacgc tggagttcgc
     9481 caaatatctg gcgaacaaaa atgtgaaggt gtggatccgc tacgttgttg tcccaggctg
     9541 gtctgacgat gacgattcag cgcatcgcct cggtgaattt acccgtgata tgggcaacgt
     9601 tgagaaaatc gaactcctcc cctaccacga gctgggcaaa cacaaatggg tggcaatggg
     9661 tgaagagtac aaactcgacg gtgttaaacc acctaagaaa gagaccatgg aacgcgtgaa
     9721 aggcattctt gagcagtacg gtcataaggt aatgttctaa tttccccgta aagcggcaac
     9781 tttattgagt tgccgctttt ttattccgcg cttcattctg ctacagtgtt tttaacacat
     9841 tttat
//
LOCUS       DAJVUK010000158         9654 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.158, whole genome shotgun sequence.
ACCESSION   DAJVUK010000158 DAJVUK010000000
VERSION     DAJVUK010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9654
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.158"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..1093)
                     /gene="fdeC"
                     /locus_tag="OQQ57_003539"
                     /pseudo
     CDS             complement(1..1093)
                     /gene="fdeC"
                     /locus_tag="OQQ57_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308363.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="intimin-like adhesin FdeC"
     gene            2209..2310
                     /locus_tag="OQQ57_003540"
     CDS             2209..2310
                     /locus_tag="OQQ57_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958164.1"
                     /translation="MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY"
     gene            2674..2937
                     /locus_tag="OQQ57_003541"
     CDS             2674..2937
                     /locus_tag="OQQ57_003541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HCS1958165.1"
                     /translation="MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPY
                     VTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGS"
     gene            2937..3077
                     /gene="ykgO"
                     /locus_tag="OQQ57_003542"
     CDS             2937..3077
                     /gene="ykgO"
                     /locus_tag="OQQ57_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HCS1958166.1"
                     /translation="MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKK
                     KR"
     gene            complement(3112..3339)
                     /locus_tag="OQQ57_003543"
                     /pseudo
     CDS             complement(3112..3339)
                     /locus_tag="OQQ57_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414829.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4163..4705
                     /gene="ecpR"
                     /locus_tag="OQQ57_003544"
                     /gene_synonym="matA"
     CDS             4163..4705
                     /gene="ecpR"
                     /locus_tag="OQQ57_003544"
                     /gene_synonym="matA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECP biosynthesis operon DNA-binding
                     transcriptional regulator EcpR"
                     /protein_id="HCS1958167.1"
                     /translation="MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
                     FVFINLNTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAG
                     LSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTV
                     YTHRRNAEAKLYSKIYKLVQ"
     gene            4731..5366
                     /gene="ecpA"
                     /locus_tag="OQQ57_003545"
                     /gene_synonym="matB"
     CDS             4731..5366
                     /gene="ecpA"
                     /locus_tag="OQQ57_003545"
                     /gene_synonym="matB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="common pilus major fimbrillin subunit EcpA"
                     /protein_id="HCS1958168.1"
                     /translation="MTHWDITSSIQLGKKCNEKKVLAIALVTVFTGMGVAQAADVTAQ
                     AVATWSATAKKDTTSNLVVTSLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKL
                     TSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYN
                     ASNRTTAQDGFTFTIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS"
     gene            5424..6092
                     /gene="ecpB"
                     /locus_tag="OQQ57_003546"
                     /gene_synonym="yagY"
     CDS             5424..6092
                     /gene="ecpB"
                     /locus_tag="OQQ57_003546"
                     /gene_synonym="yagY"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone EcpB"
                     /protein_id="HCS1958169.1"
                     /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS
                     TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD
                     EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
                     NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF
                     IPVK"
     gene            6118..8640
                     /gene="ecpC"
                     /locus_tag="OQQ57_003547"
                     /gene_synonym="yagX"
                     /pseudo
     CDS             6118..8640
                     /gene="ecpC"
                     /locus_tag="OQQ57_003547"
                     /gene_synonym="yagX"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher EcpC"
     gene            8630..>9654
                     /gene="ecpD"
                     /locus_tag="OQQ57_003548"
     CDS             8630..>9654
                     /gene="ecpD"
                     /locus_tag="OQQ57_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial adhesin EcpD"
                     /protein_id="HCS1958170.1"
                     /translation="MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENN
                     SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDM
                     WLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLS
                     DAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANL
                     RLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSLSGLSCKMVNYTLQTNGLSNTSI
                     HIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNF
                     FKQMVNLG"
BASE COUNT         2628 a         2369 c         2256 g         2401 t
ORIGIN      
        1 caatacggat cacttcagat ttgcggtact caagaacgat gttgttatta cgctcaacca
       61 ggtcatagcg gctgcctgcc agcattcgac gctcgcgaat gctgtctgta tcgagttgtt
      121 tctccagagg ttcgccaatc cgataattaa cttccaggcc aaagcgagtg tcattctcac
      181 cactcttgcc ctgcttatgc ccggcactca gggtcagaag aggcacaggc gtgtaattca
      241 cttcagcgga aatcgcatgt ggatctttct ggcgtttatc tttgccaaac agcccaactt
      301 catcgccata atactgctca tacatcaggc ttgcgccaag ctgcggtcag gcgggtaaat
      361 agccctcagc acgaatatcc cagccattcg ccgggcgttc ctgataatcc tcaatatccg
      421 gcgatttttt ccagccagaa gcccgaatat aaccattggc gctcagtttc agataatcgc
      481 gccagtattc cgcaccaaca ccaatgcggg tatgactacg ggataaatca tggtcgataa
      541 aggtgttcac cccccccatt cagtcatttc ctgaaaaatg acgccagcca aaaccaatat
      601 ttgactgagt acgatcgtct gtacgatgta ttgccccctg agtgaacaac atatttgtcg
      661 gcgtatcata aatcggataa agcatttcca gcgaagaatc cttcagcgag aaatctttat
      721 cgacattcag tttgacgcgc gctgtaccat atttcccgag ccactcctgt atttcctggt
      781 tagctttagc ggtggccatt ccggtaataa aattacgtgt cgcatcgcta tctggctgac
      841 tgcttaaaaa tgtcccggca tttgcggcaa acgacgcgac atttttctcc acgttattat
      901 cagcagttac cgtagtattt cccatgctca accgtggctg aaccgcatgc tgcgcacgtg
      961 ccgccattac tggggtaaag gtgacagcga gtggaaaaag aacctgaaca gagatatttg
     1021 cccacgccac gcagcgggcc agaactgaat aacgaaatcg tggttgttta tgacctgttt
     1081 tataacgtga cattgagata atttcctgat gaacgaatta acgaacatag gcagacacaa
     1141 ataatggcgt ctgcttgtca gaaaaaccgg ggatttcccg gtttcctttt ccgcagaaaa
     1201 ggaaatacct ttatgtaaga aagtgcaccg ccacctgata tatccagtgt ctgtagccac
     1261 tcatcaggtg gttgggcgcg ggattatatt tttatttatg ggtaaaaatt tagctttttg
     1321 tgcaagtcat taaatagata cctaagttat atttcttact ctgcggacag tgaataattc
     1381 attattcaga ctgaataata atgacctgcc tttaattagc aactattgga aatacgtcga
     1441 agtaggtata tacgccagga taaaccgata tatttattat ggatattcat tttccttcat
     1501 cggactgtaa attgcgggga tatcgaactt acactactca tcgcaacact caaacagatt
     1561 tatgaatttc gttcataacc cctgacaaat cctgccgtct aatcgagctt ttccctttac
     1621 gttatgcttc tcatgaacga gaacacaact tattcatgaa ttaaccattc cggataaact
     1681 atggaatcaa attcaggcat cgaaaggaac tggctggttt ccgttaatag attaaatatc
     1741 tattactctc ccgagagtaa aactatcaaa tcaatgagta accgatacag cctcacaaat
     1801 tctttcagat aattaacccg tcactgcggc acgttctctc gtaaggcgtg cctgcagtgt
     1861 aatccagtat gtatccggca tagttgacgg tttaatagaa ctcaattcct ctccctggtc
     1921 accaacaacg atatcttgta taacacccca ggagatacga cattatgatg agatgcgata
     1981 tgctcctcag caccaatcaa cgccaggact gggccagtct tgagatcaga ctcattcccg
     2041 ggactgactt cagtcgacat atatcaatga cgttggtgca ataaaagata gccgatgtaa
     2101 tacatctatt caaatttgtg atacatgtca aaaaactggt tgaccaaact cgttatttat
     2161 ataagggcac ttacgaagtg cgctcttttt taaagcgagg aagtaccaat gaaagagaat
     2221 aaagtacaac aaatcagtca taaactaatt aatatcgttg tttttgtcgc aattgtagaa
     2281 tacgcctatt tatttctcca tttctattaa taacggcaat aaactgttca cttcagtgat
     2341 atttaaaata tgcattctct ccctttttgt aagtaattat tatatccgtg ggagaggaat
     2401 acacgctgtc aggtaatcaa tcatactgcg ataaatcatc ggccagtaaa gtggagataa
     2461 cctccattgt cgaaaaatcc atactctcag cgaaaccatc atcaatcact catccaggcg
     2521 tttatgggag cgtcgccaac ggctgttaac aatgccagac ttccccgttg cggaaattcc
     2581 acataccact aatggtcaca gggattgggt gttgaaatga tccggatgag catgtatctt
     2641 tatggttatg ctataacata acaggtaaaa atgatgaagc ccaatatcca tcctgagtat
     2701 cgtactgtgg tgttccacga caccagtgtt gatgagtact ttaaaatcgg ctcgactatc
     2761 aaaacagacc gtgagattga gctggatggc gtaacgtatc cgtacgtgac aattgatgtc
     2821 tcttctaaat cgcacccgtt ctatacaggg aagctgagaa cagtggcatc agaaggaaat
     2881 gttgcacgat tcacccaacg ttttggtcgt tttgttagca cgaaaaaggg gtcgtgatga
     2941 aagttcttaa ctctctgcgt accgcaaaag aacgccatcc agactgtcag attgtgaagc
     3001 gaaaaggacg gctatatgtg atttgtaaat ctaatccacg ttttaaggcc gttcaggggc
     3061 gtaagaaaaa acgttgattc aaaattcgac ggattaacga tatttgtctg attaataatc
     3121 agatcggatt aatgttggtg tgtttataac accaacatta attttcctgg ggatatattc
     3181 ttcctgttca tttgaggcca actgcctgac gtttctctac gaatattcca ttatcttaat
     3241 gttgacttgt tgaccagctt cgcccctgta tgctggcatc aactctcttt tagactgaac
     3301 acgccactca gtctcctccc tttgcggcgc agcctgcatt ttcactcaaa ctgttaagat
     3361 gataaatgtg gtaaatctgt tggtactaac ataaaaacgt ttacgccaca ggaacagtct
     3421 gatccaccgg taaccccgtc gccgacgttc gagtgccagt tagagtaacg cgcacagata
     3481 actgcactca gtgccctgac aaagaggcca tcgttcctgt gacagctggc agccttcgtt
     3541 taacttcact taatctggct cttgagggct taccgaacag atgacgtaca tacgcccgtt
     3601 caattttcca tcacttattg taatgaacac ctataaccat tttgtgcggc atgttaatcc
     3661 attaaaattt cttactgatt ggcaaatcat cttcaatgac agctcattat agttttatat
     3721 tctatccctt acccttaaaa cttgtttttt tactagtcca tcacacagcg cattaagact
     3781 attcctaaca cttcagggca aagttcctga ccaatataaa atgcaagtaa gaattgaacg
     3841 ttatattgcc aataacctta tgaaaccaaa tgtctttttc ttcttatcaa aaaagcaata
     3901 ttttcagttt ttctaaatat tgacttaacc attgaattcc ttttccgttc acatattgac
     3961 actcatcgaa aaaaaaaaca taaatttaag cccaatcgaa aataattaaa cttaatctcg
     4021 tttaaccttt attgatatgt actacgtatc ttatttactt ccggtttact aaggaaactg
     4081 aatgcacctg taaaaattac aggtttggaa agtagtgaca tggcaaagtg attacagtag
     4141 ggactatgag gttaaaaacc atatggaatg tcaaaaccgt tctgataaat acatctggtc
     4201 tccccatgac gcctacttct ataaaggact atctgaactg attgtggata tcgacagatt
     4261 aatttatctg tcgttggaga aaattagaaa agatttcgtg tttatcaatc tcaatacgga
     4321 ttctttatct gaatttataa accgtgataa tgaatggtta tccgcggtaa aggggaaaca
     4381 ggtcgtattg attgcggcca gaaagtcaga agccttagca aattattggt actacaacag
     4441 caatattagg ggcgtggtat acgctggact gagtcgtgat attagaaaag aactggccta
     4501 tgtgattaat ggcaggttcc tgagaaaaga tattaagaaa gataaaatca cggaccggga
     4561 aatggaaatt atccgcatga cggcccaggg aatgcaacct aaatcgattg ccagaattga
     4621 aaattgtagt gtgaagacag tgtataccca tcggcgtaat gctgaggcca agctgtactc
     4681 aaaaatatat aagttggttc agtaaactcc aggcaagtta gttttaaaaa atgactcact
     4741 gggacatcac gtcctcaatt caactcggga agaaatgcaa tgaaaaaaag gttctggcaa
     4801 tagctctggt aacggtgttt accggcatgg gtgtggcgca ggctgctgac gtaacagctc
     4861 aggctgtagc gacctggtcg gcaacagcca aaaaagacac caccagtaat ctggttgtga
     4921 cgtcactcgg tagcttggcg ttccagtatg ccgaaggcat taaaggtttt aactcacaga
     4981 aaggtctatt tgacgtggct atcgagggtg actcaacggc taccgccttt aaactgacct
     5041 cacgtcttat caccaacaca ttaactcagt tggatacctc aggttccaca ctgaatgtgg
     5101 gcgtggatta taacggcgcg gcagtcgaaa aaactggcga taccgtgatg atcgataccg
     5161 ccaacggcgt actgggcggc aaccttagcc cgctggctaa cggttacaat gccagcaatc
     5221 gtaccaccgc acaggatggt ttcaccttca ccatcatcag cggcaccacc aatggtacca
     5281 ccgcagtaac cgattacagc actctaccgg aaggcatctg gagcggcgac gttagcgtac
     5341 agttcgacgc gacctggacc agttaatctc tctgatgtac cagcaggggt agcccccctg
     5401 ctttattcct ggacggaatt gttatgaaaa agcaccttct gcctctcgct ctgctgtttt
     5461 ccggaatatc tccggcccag gcgctggatg tcggcgatat atcatcgttt atgaacagtg
     5521 acagcagcac gctgagcaaa acgatcaaaa acagtaccga cagtggtcgc cttatcaata
     5581 tccgtctcga acggctctct tcaccgcttg acgacgggca ggttatctca atggacaagc
     5641 cggatgagtt gctactcact cccgccagct tgctgctacc cgcccaagcc agcgaagtga
     5701 tccgcttctt ctataaggga cccgcagatg aaaaagagcg ctactaccgc attgtctggt
     5761 ttgatcaggc cctcagtgat gcgcagcgcg ataatgccaa ccgcagcgct gtggccactg
     5821 cttccgcccg catcggcacc attctggtcg tcgcccctcg tcaggcgaac taccactttc
     5881 agtacgccaa cggctccctg acaaatacag gaaatgcgac gctgcggatc ctcgcctacg
     5941 gcccctgcct gaaagccgcc aacggtaagg agtgtaaaga gaattactac ctgatgccgg
     6001 gcaagtcgcg tcgttttacc cgcgtggaca ctgcggataa caaaggacgg gttgcacttt
     6061 ggcagggtga taagttcatt cccgtgaaat agatagctgt gcagatggat aacgacaatg
     6121 cctttacgac ggttctcccc aggactgaaa gcccagtttg ccttcggcat ggtctttttg
     6181 ttcgttcagc ccgatgccag cgctgctgac ataagtgcgc agcaaatagg tggggtgatt
     6241 attccgcagg ccttcagtca ggcgcttcag gacggcatga gcgtcccgct ctatattcat
     6301 ctcgccggta gtcagggtcg ccaggacgat cagcgaatcg gcagcgcttt tatctggctg
     6361 gatgatggac agctacgcat ccggaaaata cagctggaag agagtgaaga taacgccagt
     6421 gtcagcgaac aaactcgaca gcagctgatg gctctggcga acgccccgtt caatgaggcc
     6481 cttaccatcc cctgactgac aacgcgcagt tggatctcag cttgcgccaa ctgctgctgc
     6541 agctggtggt caagcgcgaa gcgctgggca ccgtactacg ctcacgtagc gaagacatcg
     6601 ggcagtccag tgttaacacc ctcagcagta atctgagcta taacttgggc gtctataaca
     6661 accagttgcg taacggcggg agcaacacat ccagctatct gtcgctgaat aacgttactg
     6721 cgctgcgcga acatcatgtg gtgctcgacg gctcgctgta cgggatcggt agcggtcaac
     6781 aggacagtga attatataaa gcgatgtatg aacgcgattt tgccggtcac cgatttgccg
     6841 gtggaatgct cgacacctgg aacttgcagt cattagggcc gatgaccgcc atttcagcag
     6901 ggaagattta cggcctttcc tggggaaacc aggccagctc caccatcttc gacagcagcc
     6961 agtcagccac gccagtgatc gcctttttac cggcggcggg cgaagtacat ctcacccgtg
     7021 atgggcggct actaagcgtt cagaacttca ctatgggcaa tcatgaagtg gatacccggg
     7081 gtctaccgta cggtatttac gatgtggaag ttgaggtgat cgttaacggt cgcgtgatca
     7141 gcaaacgcac tcaacgggtc aataagctgt ttagccgggg cgcggcgtcg gtgcaccact
     7201 ggcgtggcag gtatggggcg gtagctttca tatggatcgc tggtcggaaa acgggaaaaa
     7261 gacgcgacca gctaaagaga gttggctagc aggtgcctcg acctccggct cattgagtac
     7321 gcttagctgg gcggcaacgg gatatggata cgataatcag gcggtgggtg aaacccgtct
     7381 gacgctgccg cttggggggg cgatcaacgt taacctgcaa aatatgctgg ccagtgacag
     7441 ctcatggagc agcatcggca gcatcagcgc tactctaccg ggaggcttta gttcgctgtg
     7501 ggttaaccag gaaaaaaccc gtattggcaa tcaattgcga cgtagcgatg ccgacaaccg
     7561 tgcaatcggc ggcacactca acctgaactc actgtggtcg aagctgggca cattcagcat
     7621 cagctacaat gatgaccgcc gttacaacag ccattattac acggcagatt actatcaaaa
     7681 tgtctacagc ggtacctttg gttcgcttgg cctgcgggcc ggtattcagc gctataacaa
     7741 cggcgacagc aacgccaata cagggaaata tatcgctctc gatctctcgc taccactggg
     7801 caactggttt agcgcaggga tgacccatca aaacggctac accatggcaa acctgtcagc
     7861 acgcaaacag tttgatgaag ggaccattcg cactgttggt gccaatctgt cacgtgccat
     7921 ctccggcgat accggtgatg acaaaaccct cagcggtggg gcgtatgcac agttcgacgc
     7981 tcgttacgcc agcggaacgc tgaacgtcaa tagcgcggcg gacggctacg tcaataccaa
     8041 cttgaccgcc aatggcagcg tcggctggca gggtaaaaac attgctgcca gcggcggact
     8101 gatggcaacg ctggggtgat attcaacacc gggctggagg acgacggtca gatcagcgcc
     8161 aaaatcaacg ggcggatttt cccgcttaac ggcaagcgta actatctccc gctctctccc
     8221 tatggaagat atgaggtgga gttacagaac agcaaaaact cactcgacag ttacgatatc
     8281 gtcagcggcc gcaaaagtcg tctgactctc tatccaggca atgtcgctgt cattgagcca
     8341 gaggtgaagc agatggttac cgtctccggt cgtatccgtg cggaagacgg cacactgctg
     8401 gctaacgcac ggattaacaa ccatatcggc cgaacccgaa ccgatgaaaa cggcgagttt
     8461 gtcatggacg tggataagaa ataccccact atcgattttc gctacagtgg caataaaacc
     8521 tgcgaagtgg ctctggaact caaccaggcg cgcggtgccg tctgggtcgg tgatgtggtc
     8581 tgcagcggcc tctcatcgtg ggcggcggtg acgcagacag gagaagagaa tgagagttaa
     8641 cctactaata acgatgataa ttttcgcgct aatctggcca gtaactgcgc tcagagcggc
     8701 agtgagcaaa acaacctggg cggatgcacc ggcacgcgag tttgtgtttg tcgaaaacaa
     8761 ctcagacgac aactttttcg tcactcctgg cggggcgctg gatccgcgcc tgaccggtgc
     8821 caaccgctgg accggtttaa aatacactgg ttcaggaacc atctatcagc aaagcctcgg
     8881 ctacattgat aacggttaca acaccggcct ttataccaac tggaagtttg atatgtggct
     8941 ggaaaattcg ccggtttcat ctcctttaac tggcttacgc tgcatcaact ggtacgcagg
     9001 gtgtaatatg accaccagtc ttatcctgcc gcaaaccacc gacgccagtg gattttatgg
     9061 cgcgacggtg accagcggcg gcgcgaagtg gatgcacggc atgttgtcag acgcgtttta
     9121 ccagtatatg caacaaatgc ccgtcggcag cagctttaca atgaccatca atgcctgtca
     9181 gacctctgtg aactatgacg ccagcagcgg cgcgcgttgt aaggatcagg cctccggcaa
     9241 ctggtatgtt cgcaatgtca cccatacgaa agcagcaaat cttcggttaa taaataccca
     9301 ctcgctggcg gaggtattta tcaacagcga cggggtgccg accctgggcg aagggaacgc
     9361 cgactgccgg acacagacca tcggcagcct ttcaggatta agttgtaaga tggtcaacta
     9421 taccctgcaa acaaacggac tcagcaacac ctcaatccat atattcccgg cgatcgccaa
     9481 ctcgtcgtta gcctcggccg tcggggcgta cgatatgcag ttcagtctga atggcagttc
     9541 atggaaaccg gtgagcaata ccgcctatta ctacaccttc aacgagatga agagcgcaga
     9601 ctcgatctat gttttcttct cgagcaactt ctttaagcag atggtgaacc tcgg
//
LOCUS       DAJVUK010000159         9499 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.159, whole genome shotgun sequence.
ACCESSION   DAJVUK010000159 DAJVUK010000000
VERSION     DAJVUK010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9499
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.159"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..192
                     /locus_tag="OQQ57_003549"
     CDS             <1..192
                     /locus_tag="OQQ57_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1958171.1"
                     /translation="AAHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFN
                     PLATLPSGDKVAAAVGITP"
     gene            complement(297..833)
                     /gene="rcdA"
                     /locus_tag="OQQ57_003550"
     CDS             complement(297..833)
                     /gene="rcdA"
                     /locus_tag="OQQ57_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator RcdA"
                     /protein_id="HCS1958172.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            917..2125
                     /locus_tag="OQQ57_003551"
     CDS             917..2125
                     /locus_tag="OQQ57_003551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958173.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            2125..2940
                     /gene="ybjI"
                     /locus_tag="OQQ57_003552"
     CDS             2125..2940
                     /gene="ybjI"
                     /locus_tag="OQQ57_003552"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HCS1958174.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGNGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            3026..3310
                     /locus_tag="OQQ57_003553"
     CDS             3026..3310
                     /locus_tag="OQQ57_003553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958175.1"
                     /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEGMVIEHQIDDHHH"
     gene            complement(3351..4581)
                     /gene="mdfA"
                     /locus_tag="OQQ57_003554"
                     /pseudo
     CDS             complement(3351..4581)
                     /gene="mdfA"
                     /locus_tag="OQQ57_003554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
     gene            4866..5462
                     /gene="ybjG"
                     /locus_tag="OQQ57_003555"
     CDS             4866..5462
                     /gene="ybjG"
                     /locus_tag="OQQ57_003555"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCS1958176.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
                     LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAMGHKLYQRLQSWYRFCFALPIRKGWVRD"
     gene            5520..6278
                     /gene="deoR"
                     /locus_tag="OQQ57_003556"
     CDS             5520..6278
                     /gene="deoR"
                     /locus_tag="OQQ57_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HCS1958177.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPHSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTHRIKLMY"
     gene            complement(6325..7516)
                     /gene="dacC"
                     /locus_tag="OQQ57_003557"
                     /pseudo
     CDS             complement(6325..7516)
                     /gene="dacC"
                     /locus_tag="OQQ57_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
     gene            7763..8388
                     /gene="gstB"
                     /locus_tag="OQQ57_003558"
                     /pseudo
     CDS             7763..8388
                     /gene="gstB"
                     /locus_tag="OQQ57_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308945.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase GstB"
     gene            complement(8385..>9499)
                     /gene="yliI"
                     /locus_tag="OQQ57_003559"
     CDS             complement(8385..>9499)
                     /gene="yliI"
                     /locus_tag="OQQ57_003559"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldose sugar dehydrogenase YliI"
                     /protein_id="HCS1958178.1"
                     /translation="HRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLPD
                     NHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS
                     YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLF
                     IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGM
                     AMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGT
                     EQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRIL
                     TDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN"
BASE COUNT         2297 a         2456 c         2342 g         2404 t
ORIGIN      
        1 gcggcgcact tcatgatgtc gggtggaaac attctggcct tacaaaaaat tctcggacac
       61 cacgatataa aaatgactat gcgttacgca catctggcac cggatcatct ggaaacggcg
      121 ctccgtttca atcctctggc aacgctgcca agtggcgaca aagtggcggc agcggttggc
      181 attaccccgt aataaccacc actgaccacc aacctaactt attgttttta atctaactta
      241 ttgttttcat taacccgttt acataaatgg gttttttgtt atctaaaatt tatctactac
      301 cctgcaaccc tctcaaccat cctcaaaatc tcctcgcgcg atagcggctt acggtcggtg
      361 acaaaatgca gcgtcatccc ctcaataaac gcatcaagcg cgcgggcggt tccgggttca
      421 aaccattgtt cgagcgtttg ctgactgcgc tgcatccagt tttgcattac cgtttttaat
      481 agcggttttc ggctagccag cgcgtagagc tggtacatca gctccatatt atccggcgtt
      541 gcaacctgtg agctgtagat catatcggtg atagcctggc atgcgccttg agcatcacta
      601 acatcgctaa aaaatgcctg atattgccgg gacataatct cagtaaaact gctgaacgcc
      661 tccagcaaca actcatcaat tcctgaaaaa tagtaggtca tcgatcccaa cggtaccccg
      721 gcaagggtag caattttgcg gtgcgtaaca gcatgtattc cgtaaagttt caccgcctcc
      781 agcgtggcct ggataatttt ttctcgccgt tgcggatcgt tagcgcgacg catgtcattt
      841 cctctgtctg caattgtgta caaatgtaca caaccttgct aatgttgtct tccctcttct
      901 tattttgacg tgatctatga ccgtaaattc ttcacgtaat gcattgaaac gccgaacctg
      961 ggcgctgttt atgttcttct ttttgccagg cctgttaatg gcgtcctggg caacccgtac
     1021 gcctgctatc cgcgatattc tctctgtctc gatcgctgaa atgggcggtg ttctctttgg
     1081 tctgtcgatc ggttcgatga gcggtattct ctgctcggcg tggttagtga aacgctttgg
     1141 gacacgtaat gtcatcctgg tcacgatgtc ctgcgcattg atcgggatga tgatattaag
     1201 tctggcactc tggctgacat cgcccctgct ctttgccgtt ggtctcggcg tctttggggc
     1261 aagttttggt tctgcggaag tggcgataaa cgttgaaggt gccgccgttg agcgagaaat
     1321 gaataaaacg gttttgccga tgatgcacgg tttttatagc ctgggcacgc tggcaggcgc
     1381 tggtgtcggg atggcactga cggcctttgg cgttccggca acggtgcaca ttttattggc
     1441 ggcgctggta ggtatcgcgc ctatttatat cgccattcag gcaatccctg acggtacggg
     1501 caaaaatgct gccgatggca cccagcatgg cgaaaaaggc attccttttt atcgcgatat
     1561 ccagttgctg ttgattggtg ttgtagtgct ggcgatggcc tttgccgaag gttctgccaa
     1621 cgactggtta cccttattaa tggttgacgg tcacggtttt agccctactt ccggctcgct
     1681 gatttatgcc ggttttaccc tggggatgac cgttggacgc ttcactggcg gttggttcat
     1741 cgaccgttac agtcgcgttg ccgtggttcg ggccagtgca ctaatggggg cgttgggtat
     1801 tgggctgatt atttttgtcg atagcgcctg ggtcgctggg gtgtctgttg tactctgggg
     1861 actgggtgcc tcgctgggct tcccgctgac catttctgcc gccagcgata ccggccccga
     1921 tgcaccaacc cgcgtcagtg tggtagcaac gaccggttat ctggctttcc tcgtcgggcc
     1981 gccgctgctg ggctatctcg gcgaacatta tggattacgt agtgcaatgc tggttgtact
     2041 ggcgctggtt attctcgcgg ctattgtcgc gaaagccgtc gccaaacccg ataccaaaac
     2101 gcagacggcg atggagaata gttgatgagc attaaattaa ttgcggtaga catggatggt
     2161 actttcttaa gcgatcaaaa aacctataac cgtgagcggt ttatggctca gtatcagcaa
     2221 atgaaagcac aaggcattcg ctttgtggtc gccagcggga atcaatatta tcagttgatc
     2281 tctttcttcc ctgaaattgc taatgaaatt gcctttgtgg ctgaaaacgg cggctgggta
     2341 gtgagtgaag gcaaagatgt ttttaatggc gagctgtcga aggatgcctt tactactgtc
     2401 gtggaacatt tgctgacgcg cccggaagtg gaaattattg cctgcggaaa aaatagcgcc
     2461 tatacgctca aaaaatatga cgatgccatg aaaacggtgg cggaaatgta ttatcaccgt
     2521 ctggaatacg ttgataactt tgacaactta gaagatattt tctttaagtt tggcctgaat
     2581 ctttccgatg aactgattcc acaagtacaa aaagcattac atgaggccat cggcgatatt
     2641 atggtgccag tccacaccgg caacggcagc atcgatctga ttatccccgg cgtacataaa
     2701 gccaatggcc ttcgccaact gcagaaatta tggggaatag acgacagcga agtggtggtc
     2761 tttggcaatg gcggtaacga tattgagatg ctgcgtcagg caggctttag ttttgcaatg
     2821 gaaaatgccg gcagcgcggt cgtcgcagcg gcaaaatacc gggcaggctc caataaccgt
     2881 gaaggcgtac tggatgtgat cgataaagtg cttaaacacg aagcgccatt tgaccaataa
     2941 aaacggcagc acgcccggca acacaatacc tgaatgaagg ctgcataatt cgcggaaatt
     3001 aacccgctgc attatttcag gcgaaatgat tatgaaaaat tgtctactgt tgggcgcgct
     3061 tttaatgggc tttactggtg tggcgatggc gcaaagtgtc accgtcgatg tgccgagtgg
     3121 atacaaagtg gttgtagttc ctgattcagt cagcgttcca caagcggtca gcgtcgcgac
     3181 tgtgccgcaa accgtctatg tggctcctgc gccagctccg gcttaccgcc cgcatcctta
     3241 tgctcgccat cttgccagcg taggtgaagg gatggttatc gaacaccaga ttgacgacca
     3301 tcaccattaa ttcgagaatt cctgatcgca caaagcagtc aggcattttt ttacccttcg
     3361 tgagaatttc ccatctgttt atcttttaaa aagataacca tcagcgacag ccacaaaatt
     3421 ccgttgacaa ggttgaagag attaaactgt ccgttgcccc cgttcagcca ggcatgtttg
     3481 ctgatttcaa taccaacggt aaagatcagc atttgcagca ttcccatcgc cgcagaaacc
     3541 gtacctttac tcatatcgct ggcaaacagg gttaatcgca ccagtcccgc attcgccaga
     3601 ccaataccga aagcataaat acttaacccg gcagtcatcc ataaatacgc gtgcgatgag
     3661 ataaccgttg ccgcagcagc gaccaacaga ccaatcataa tcggccagcc gcccataatt
     3721 atcagcgaac gtacggtgcg gcgcgaggtc agacgcgcta acagcaagtt acccgcaatt
     3781 aacgccccga aaataggcac ttgcagcaag ccatattcat agctgctcaa ctgctcgccg
     3841 gtaatgatga taatcggcga ctgggcgatc cacgccagca atggcaggct aacgaatccc
     3901 agcgccagcg cccccgccac aaagcggccg ttcttcagca ccagcttata gtcacgaccg
     3961 agttctttca gtgacagttt ctcgcctata cgcgtggcgg tttcaggcat agctcgttgc
     4021 agaccgaaaa aggagatcgc tgccaatgcg gcaaacaaaa caaacatccc ctcccagggc
     4081 agcacatgga tccacgccgc gcccaccagc ggaccaagta gcggagcaat cagcgccacg
     4141 ttcgccatca gcgcggtgat cttgatacaa accgcctctt cgaaagattc ctgaattgcg
     4201 gcgtatccca cagcgccaat gaaacagagg cttatgccct gcaagaagcg caacagagtg
     4261 aattgttcaa tgttttgcgc cagtaatatt gccagacagg tgatgataaa ccacaccacc
     4321 cccgccagca tcaccggacg gcgaccaata cgatccgaca gcggccccag gagccattgt
     4381 aaaaacatcc cgcccgccag atatgcggtc attgaagtag gaacccaatc aatgcccgcc
     4441 tgatattgtt ccaccacggc caacataccg ggttgaatca tatctgccga tataggttga
     4501 aaattcgtaa agcaccagac agagagggaa aagtaacgcc tgacgtccaa gcctggcacc
     4561 ggaagctaat ttattttgca tgcaatttct tcgccaataa taatcgcgca gagtttaata
     4621 aaagcgcagc taacgagaaa gcgaattttg tagctgaaac cacggttaag cacattctta
     4681 cattattgcg agtatagcta cgctttcttt aagttttatt taacctatgc ccgttacaat
     4741 cacccaccgt aaacaggccg cttgagggaa ataagacgat gccgctttac ccagtttaac
     4801 ctgcacttta ttctcaacga cttgcctgta ttggctccct tttaatcact ttgcgtcggg
     4861 aagttatgct ggaaaatttg aatctctctc tattctctct tattaacgcg acgccagact
     4921 cggctccgtg gatgatctcg ttggcgattt ttattgctaa agatttgatt accgtggtgc
     4981 cgctgctggc cgcggtgctt tggttgtggg ggcttacagc acaacggcaa ctggtgataa
     5041 aaatcgctat cgcgctggcg gtcagcctgt ttgtgtcctg gacgatggga catctttttc
     5101 cgcacgaccg accctttgtc gaaaatatcg gctataactt cctgcatcat gcggcggatg
     5161 actcattccc aagcgaccac ggtacggtga ttttcacctt tgcactggca tttttatgct
     5221 ggcatcgcct gtggtccggc tcacttttaa tggtgctggc cgtcgtcatt gcctggtcgc
     5281 gcgtttatct tggcgtccac tggccgctgg atatgctcgg tggattgctg gcaggtatga
     5341 ttggctgcct tagtgcccag attatctggc aagcgatggg gcataaactc tatcaacgtc
     5401 tgcaatcgtg gtatcgcttc tgttttgcat taccgatccg caaaggctgg gtgcgtgact
     5461 gatctctgct aaaaagtgta gtattgagcg gctcgcttca ataactattc agagggatta
     5521 tggaaacacg tcgcgaagag cgtatcgggc agctgctgca agaattaaaa cgcagcgata
     5581 agttacatct taaagacgcc gccgccctgc ttggggtttc ggagatgacg attcgtcgcg
     5641 atctgaacaa ccacagtgcg cccgtcgttt tgctcggcgg ctatattgtt ctggaaccgc
     5701 atagtgccag ccattacctg ttaagcgatc aaaaatcccg cctggtggaa gaaaaacgcc
     5761 gggcggcaaa actggctgcg acactggtag aacccgatca gaccctcttt tttgactgtg
     5821 gcaccaccac gccgtggatt attgaagcga ttgataatga aatccctttt accgccgttt
     5881 gttattcgct aaataccttt ctggcgctga aagagaaacc ccattgccgc gcatttctgt
     5941 gcggtggtga atttcacgcc agcaacgcca ttttcaaacc catcgatttt cagcaaacgt
     6001 tgaataattt ttgcccggat atcgcttttt attccgcggc gggcgtgcat gtcagtaaag
     6061 gcgctacctg ttttaatctt gaagagttgc cggtaaaaca ctgggccatg tcgatggcgc
     6121 aaaagcatgt gctggttgtc gaccacagta aatttggcaa ggtccgtccg gcgcgcatgg
     6181 gtgacctgaa acgctttgat attgtggtga gtgattgttg cccggaagat gagtatgtga
     6241 agtacgcgca gacgcaccgt attaagttga tgtattaatg acgtataacc ggatgacgtt
     6301 tcgcgccatc cggttatcag aagattaaga gaaccagctg ccgaaccact gatggaattt
     6361 catcatcacg aaatcccaca tcctaccaaa gaatccgccc tcttccacat tttccatcac
     6421 gatcagcgga cgctgctcaa tggatttacc gttaagctgg aaatcaatgg tcccgacaac
     6481 ctgacctttt ttcagcggtg cggtaagctg cggttccgtt aacgtgtagc tcgccttcag
     6541 gtttttcagc tgcccacgcg gtatggtcac tgagcccgct tcgcctgccc cgagattcac
     6601 ttcgctctta tcaccaaacc agacgcgctg agtcacaaag gtggcatcag gtttaattgg
     6661 cgtcacggtt tcaaagaagc ggaaacccca ggtcaataat ttctcagact catcggtcag
     6721 ttttcgcccc caacactacg gagattaaac gcatatcgcc ctgggtagcc gaagcaacca
     6781 gattatatcc cgcgcctgcc gtggttcctg tcttcatgcc atcaacattc agattgctgc
     6841 tccacagcag acggttacgg ttaggctgac gaattttgtt gaaggtgaac tctttctctt
     6901 tatgaatggc gtactcttcc ggcacatcgt ggatcaatgc tttacccagc aatgccatat
     6961 cgcgcgcggt actgaactgc cccggcgcat ccaggccgtg caccgtctgg aaggtagtgt
     7021 tggtcagacc cagttttttg gcataaccat tcatcagacc aataaatgac tcctggctcc
     7081 cggcaacgta atcggccagc gcaatacagg cgtcattacc ggactggata atcacatctt
     7141 tgttcaagtc tgccaccgaa acctgatcgc ccggtttgag gaacattacc gatgaaccac
     7201 gcagtgccgg atttcccgtc gcccaggcat ctttaccgac cgtcaccata tcggtgagtt
     7261 taatcttatc ggccttaagc gcctgcccaa ccacatagct ggtcatgatt ttagtcaggc
     7321 tcgcgggatc cagtttctca tccgcattgc cttctgccag cactttaccg ctggcgtaat
     7381 ccattaaaat ccatgcacgc gcatccacgc tcggcgcttc aacggtttgt tcggccgcga
     7441 atgccgttgg ggcaaaaagg aataaaaatg cagaacccgc tgcaagacca cgaaggagag
     7501 aggagtattg cgtcataaat gccacccgag tatccattca aaaaaaatac gttatatcgc
     7561 cgtatgataa gttcggtgat taataacgca cacacaaact taaagaaacc gtaagttggt
     7621 aaagttttta aagtttatgc aatatcctgc cgcttcgctg cttctggtgt catttttttg
     7681 ccagctgttg cttaaaagtt aactttactt caccatcgga gtcctgttca gcctgtggct
     7741 gcctgtcgga aaaggggtga gtatgattac gctgtggggt cggaataatt caaccaacgt
     7801 aaaaaagtat tgctgacgct cgaagaactg gaactacctt atgagcaaat tctcgcgggc
     7861 cgtgagtttg ggataaatca cgatgctgat tttctggcga tgaaccctaa cgggctggtg
     7921 ccattgttgc gtgacgacga aagtgatctc attctttggg aatcaaacgc cattgtccgc
     7981 tatctggcgg cacagtacgg gcaaaaacgc ctgtggatcg actcaccggc acgtcgtgcg
     8041 gaagcggaaa aatggatgga ctgggcaaac cagacgctca gtaatgccca tcgagggatc
     8101 ctgatgggat tagtcagaac accaccggaa gagcgcgatc aggccgccat tgatgccagt
     8161 tgcaaagagt gcgacgccct gtttgccctg ctcgatgcgg aactggcaaa agtaaaatgg
     8221 ttctctggcg acgagtttgg tgtgggcgat atcgctatcg caccgttcat ctacaatttg
     8281 tttaacgttg gcctgacctg gacaccgcgt ccaaatctgc aacgctggta tcagcaactc
     8341 actgaacgcc ccgcagtgcg caaagtggtg atgattcccg ttagctaatt gcgtgggcta
     8401 actttaagta attccccact ggactcgtcg gtgagaacgt ataaataacc gtcgggtcca
     8461 gtgcgaacat cacgaattcg ctgccctctg tccgttaaaa tacggccatc ttctgtcact
     8521 ttgtcgccgt tgacgctcat cacaatgaca tctttatctt tcagcgcgcc aataaataat
     8581 ttttgctgcc actgggggaa tttatcgctg ttatagaagg ccatgccgct cacagcgggc
     8641 gaatctttcc agtaaaaaac aggttgctcg gtcccggcga cgatctcccc tttcgcttcc
     8701 ggtatcttaa agcctgaata gttgattccc caggttgcca gcggccagcc gtagtttttg
     8761 cctttttgcg ggatattaat ttcatcacca ccgcgcgggc catgttcatt cagccacagt
     8821 gcattactcc acggattcat cgccattcct tgcggattac gaatgccata agaccagatc
     8881 tcggcgcgcg caccggattc ctttataaaa ggattatcat ccgggatttc gccctgatcg
     8941 gtcagacgca ccagtttgcc ctgtaattta tccagatcct gcgccgtcgg gcgctgattg
     9001 ttttcgccca gagcaataaa aagataacct ttaccgtcga ataccagccg cccgccaaaa
     9061 tggttgccgg tagacagttt tggcatctgg cggaagacgg tgcggaagtc ggtcactttt
     9121 gagagatcat cacttaagcg gccataaccc acagcagttc cggctttgcc atcatcgcca
     9181 acttcggaat aacttaacca gatgcggcga gactgagcaa aatcaggcgc taaaaccacg
     9241 tccagcaggc cgccctgccc gtgcgcccaa acgtccggaa ctccggaaag cggcgcagat
     9301 aatccttttc ctgcttgcca gtgacgcaac tcgccgccgc gcagagtgat taacataccg
     9361 tgattatcgg gtaaaaaggc cagtgcccag ggatggtcga gtttgtcttg cagtacttcg
     9421 acatttaccg ttgcaggagc cgcccagaga gcggaagaaa gacaaataag gggcacaagg
     9481 aaaaaggatt gtcgatgca
//
LOCUS       DAJVUK010000160         9145 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.160, whole genome shotgun sequence.
ACCESSION   DAJVUK010000160 DAJVUK010000000
VERSION     DAJVUK010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9145
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.160"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            247..768
                     /gene="fecI"
                     /locus_tag="OQQ57_003560"
     CDS             247..768
                     /gene="fecI"
                     /locus_tag="OQQ57_003560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FecI"
                     /protein_id="HCS1958179.1"
                     /translation="MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQD
                     TFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPE
                     ERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKA
                     VEHCLLFRLEYGL"
     gene            765..1718
                     /gene="fecR"
                     /locus_tag="OQQ57_003561"
     CDS             765..1718
                     /gene="fecR"
                     /locus_tag="OQQ57_003561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fec operon regulator FecR"
                     /protein_id="HCS1958180.1"
                     /translation="MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQ
                     DNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSE
                     TGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA
                     KDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNA
                     GESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA
                     GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL"
     gene            1805..4129
                     /gene="fecA"
                     /locus_tag="OQQ57_003562"
     CDS             1805..4129
                     /gene="fecA"
                     /locus_tag="OQQ57_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate transport protein FecA"
                     /protein_id="HCS1958181.1"
                     /translation="MTPLRVFRKTTPLVNTIRLSLLPLAGLSFSAFAAQVNIAPGSLD
                     KALNQYAAHSGFTLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSW
                     TLEPAPAPKEDALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRI
                     PGVSAPENNGTGSHDLAMNFGIRGLSPRLASRSTVLMDGIPVPFAPYGQPQLSLAPVS
                     LGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPK
                     ETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLL
                     QYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNIQGF
                     YTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYLNESTHE
                     MRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQ
                     NNAITGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVE
                     PEKARTWELGTRYDDGALTAEIGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQAR
                     YDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTF
                     NLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKN
                     IFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF"
     gene            4174..5076
                     /gene="fecB"
                     /locus_tag="OQQ57_003563"
     CDS             4174..5076
                     /gene="fecB"
                     /locus_tag="OQQ57_003563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter
                     substrate-binding protein FecB"
                     /protein_id="HCS1958182.1"
                     /translation="MLAFIRFLFAGLLLVISHAFAAMVQDEHGTFTLEKTPQRIVVLE
                     LSFADALAAVDVSPIGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDL
                     IIADSSRHAGVYIALQQIAPVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQH
                     KERMAQWASQLPKGTRVAFGTSREQQFNLHTQETWTGSVLASLGLNVPAAMVGASMPS
                     IGLEQLLAVNPAWLLVAHYREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRG
                     IFAAERIAADTVKIFHHQPLTVVK"
     gene            5073..6071
                     /gene="fecC"
                     /locus_tag="OQQ57_003564"
     CDS             5073..6071
                     /gene="fecC"
                     /locus_tag="OQQ57_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-dicitrate ABC transporter permease FecC"
                     /protein_id="HCS1958183.1"
                     /translation="MTAIKHPVLLWGLPIAALIIIFWLSLFCYSAIPVSGADATRALL
                     PGHTPTLPEALVQNLRLPRSLVAVLIGASLALAGTLLQTLTHNPMASPSLLGINSGAA
                     LAMALTSALSPTPIAGYSLSFIAACGGGVSWLLVMTAGGGFRHTHDRNKLILAGIALS
                     AFCMGLTRITLLLAEDHAYGIFYWLAGGVSHARWQDVWQLLPVVVTAVPVVLLLANQL
                     NLLNLSDSTAHTLGVNLTRLRLVINMLVLLLVGACVSVAGPVAFIGLLVPHLARFWAG
                     FDQRNVLPVSMLLGATLMLLADVLARALAFPGDLPAGAVLALIGSPCFVWLVRRRG"
     gene            6068..7024
                     /gene="fecD"
                     /locus_tag="OQQ57_003565"
     CDS             6068..7024
                     /gene="fecD"
                     /locus_tag="OQQ57_003565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter permease
                     subunit FecD"
                     /protein_id="HCS1958184.1"
                     /translation="MKIALVIFITLALAGCALLSLHMGVIPVPWRALLTDWQAGREHY
                     YVLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLL
                     MPSLPVMVLPLLAFAGGMAGLILLKMLAKTHQPMKLALTGVALSACWASLTDYLMLSR
                     PQDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLG
                     VSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTG
                     ALLLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR"
     gene            7025..7792
                     /gene="fecE"
                     /locus_tag="OQQ57_003566"
     CDS             7025..7792
                     /gene="fecE"
                     /locus_tag="OQQ57_003566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter ATP-binding
                     protein FecE"
                     /protein_id="HCS1958185.1"
                     /translation="MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTL
                     LNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRN
                     PWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV
                     LLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMA
                     QGTPEEVMTPGLLRTVFSVEAEIHPEPVSGRPMCLMR"
     gene            complement(8351..8608)
                     /locus_tag="OQQ57_003567"
     CDS             complement(8351..8608)
                     /locus_tag="OQQ57_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000177060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958186.1"
                     /translation="MTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFP
                     LAKKGEGRARLPSLYASFGKLGETPTHEDIIDNNRSINWPV"
     gene            complement(8691..9145)
                     /locus_tag="OQQ57_003568"
                     /pseudo
     CDS             complement(8691..9145)
                     /locus_tag="OQQ57_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611482.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT         1987 a         2613 c         2525 g         2020 t
ORIGIN      
        1 cagcattacc gaaatcccca tcctttaggg cagtgaggat gtcaataata gcagaccaca
       61 tcatgagtca ttctgaccga cacatgccag aagcagatgc tccatcccat tttataccta
      121 ccttataaca cttagaaaaa caacatgtta aaaatgtcta ttggaaacaa ttttatttcc
      181 aattgtaatg ataaccattc tcatattaat atggctacgt gataattaac ttttgatgca
      241 ctccgcatgt ctgaccgcgc cactaccaca gcttccttaa cgttcgagtc gctttatggc
      301 acacatcacg gctggttgaa aagctggctg acgcgcaaac tccagtctgc ttttgatgca
      361 gatgacattg cccaggacac ttttttgcgg gtaatggtca gcgaaacgct ctcgacgatc
      421 cgcgatcctc gctccttcct gtgcactatc gccaaacgcg tgatggtgga cctgtttcgc
      481 cgaaacgcgc tggaaaaagc gtatctggag atgctggcgc ttatgccgga ggggggagcg
      541 ccttcacctg aggaacgcga aagccaactc gagaccctac aactcctcga cagcatgctg
      601 gacgggctaa acggcaaaac acgtgaagcg tttctgcttt cgcaactgga tggtctgaca
      661 tacagcgaga ttgcgcacaa actcggtgtt tccatcagct ccgtgaaaaa atacgtggcg
      721 aaagccgtcg agcactgcct gctgttccgt ctggagtatg ggttatgaat cctttgttaa
      781 ccgattcccg ccgtcaggcg ctgcgttcag cttcccactg gtatgccgtt ctaagcggcg
      841 agcgcgtcag cccacaacag gaagcgcgct ggcaacagtg gtatgaacag gatcaggata
      901 accagtgggc ctggcagcag gttgaaaacc tgcgcaacca gcttggcggt gtgcctggcg
      961 acgttgccag ccgggcgttg cacgataccc gcctcacccg ccgtcacgtg atgaaaggat
     1021 tactgctgtt gctcggcgct ggcggaggct ggcagctctg gcagtcggaa accggcgaag
     1081 gtctgcgggc agattaccgc accgccaaag gcacagtcag ccgtcagcaa ctggaagatg
     1141 gctccctgct cacgctgaat acccaaagcg cggcggatgt gcgttttgat gcgcatcaac
     1201 gcaccgtccg gctctggtac ggtgaaatcg ccattactac cgcgaaagat gccctgcaac
     1261 gccccttccg tgtcctgacc cgtcagggcc agctcactgc tttagggaca gaatttaccg
     1321 tccgccagca ggataatttc acgcagcttg acgtgcagca gcacgctgtg gaagtgcttc
     1381 tcgccagtgc ccccgcgcaa aaacgcatcg tgaacgctgg tgaaagcctg cagttcagcg
     1441 cctctgagtt tggcgcagtg aaaccgctgg atgacgagag tacaagctgg acgaaggaca
     1501 tcctgagctt cagcgataaa ccgctgggtg aggtgatagc cacgctaacc cgttaccgca
     1561 acggcgtgct gcgctgcgat cccgccgttg ccgggctgcg cctgagcggg acgttcccgc
     1621 tgaaaaatac cgatgcgatc ctgaacgtta tcgcgcaaac gcttcccgtt aaaattcagt
     1681 ctattacgcg gtactggata aacatttcac cactgtaagg aaaataattc ttatttcgat
     1741 tgtccttttt acccttctcg ttcgactcat agctgaacac aacaaaaatg atgatgggga
     1801 aggtatgacg ccgttacgcg tttttcgtaa aacaacacct ttggttaaca ccattcgcct
     1861 gagcctgctg ccgctggccg gtctctcgtt ttccgctttt gctgcacagg ttaatatcgc
     1921 accgggatcg ctcgataaag cgctcaatca gtatgccgca cacagcggat ttaccctctc
     1981 ggttgacgcc agcctgacgc gcggcaagca gagcaacggc ctgcacggcg attacgacgt
     2041 cgagagcggc ctgcaacaac tgctggacgg cagcggactg caggtaaaac cgctgggaaa
     2101 taacagctgg acgctggagc ccgcgcccgc accaaaagaa gatgccctga ccgtggtcgg
     2161 cgactggctg ggtgatgcgc gtgaaaacga cgtatttgaa catgctggcg cgcgtgacgt
     2221 gatccgccgt gaggatttcg ccaaaaccgg cgcaaccacc atgcgtgagg tacttaaccg
     2281 catccctggc gtcagcgcgc cggaaaacaa cggcaccggc agccacgacc tggcgatgaa
     2341 ctttggcatc cggggcctga gcccgcgcct cgccagccgc tcgaccgtcc tgatggacgg
     2401 catccccgtc cccttcgccc cttacggtca gccgcagctt tcactggctc ccgtttcgct
     2461 cggcaacatg gatgccattg acgtggtacg cggtggtggt gcggtgcgtt acggaccgca
     2521 gagcgtgggc ggcgtggtga actttgttac ccgtgccatt ccgcaggact ttggtatcga
     2581 ggcgggcgtg gaaggtcagc tcagcccaac ctcttcacaa aacaacccga aagagacgca
     2641 caacctgatg gtgggcggca cagcggacaa cggttttggc accgcgctgc tctactccgg
     2701 cacgcgcggc agtgactggc gcgagcacag cgccacccgc atcgacgacc tgatgctgaa
     2761 aagcaaatat gcgccggatg aggtgcacac cttcaacagc ctgctgcaat attacgacgg
     2821 tgaagccgac atgcccggtg gcctgtctcg cgcggattac gacgccgatc gctggcaatc
     2881 cacccgcccg tatgaccgct tctggggtcg tcgcaagctg gcgagcctgg gctaccagtt
     2941 ccagccagac agccagcata aattcaacat tcaggggttc tacacccaaa ccctgcgcag
     3001 cggctacctg gagcaaggca aacgcatcac cctctcgccg cgtaactact gggtgcgcgg
     3061 tattgagcca cgctacagcc agatctttat gatcggccct tccgcgcacg aagtgggcgt
     3121 gggctatcgc tatttgaatg aatcaacgca tgaaatgcgt tactacaccg ccaccagcag
     3181 cgggcagttg ccgtccggct caagccctta cgaccgcgat acgcgttccg gcaccgaggc
     3241 gcacgcctgg tatctggatg acaaaatcga catcggcaac tggaccatca cgccgggtat
     3301 gcgtttcgaa catatcgagt cataccagaa caacgccatc acaggcacgc acgaagaagt
     3361 gagctataac gcaccgcttc cggcgttgaa cgtgctctat cacctgactg acagctggaa
     3421 tctttatgca aacactgaag gctcgttcgg caccgtacag tacagccaga ttggcaaggc
     3481 tgtgcaaagc ggcaatgtgg aaccggaaaa agcgcgaacc tgggaactcg gtacccgcta
     3541 cgacgacggc gcgctgacgg cggaaatagg gctgttcctg attaacttta acaatcagta
     3601 cgactccaac cagaccaacg acaccgtcac tgcacgtggc aaaacgcgcc ataccgggct
     3661 ggaaacgcag gcacgttacg atctgggtac gctaacgcca acgcttgata acgtttccat
     3721 ctacgccagc tatgcgtatg tgaacgcgga aatccgcgag aaaggcgaca cctacggcaa
     3781 tctggtacca ttctccccga aacataaagg cacgctgggc gtggactaca agccaggaaa
     3841 ctggacgttc aatctgaaca gcgatttcca gtccagccag tttgcggata acgccaatac
     3901 ggtgaaagag agcgccgacg gcagtaccgg ccgcattccc ggcttcatgc tctggggcgc
     3961 acgcgtggcg tatgactttg gcccgcagat ggcagatctg aacctggcat tcggtgtgaa
     4021 aaacatcttc gaccaggact acttcatccg ctcttatgac gacaacaaca aaggcatcta
     4081 tgcaggccag ccgcgcacgc tgtatatgca ggggtcgttg aagttctgat gtgttaacgc
     4141 ccggcttgcc gggcttttag ctggaatgtg attatgttgg catttatccg ttttcttttt
     4201 gcaggcctgc tgctggtgat cagccacgcc tttgccgcca tggttcagga cgaacacggc
     4261 acgtttacac tcgaaaaaac gccacaacgg attgtggtgc tggaactctc gttcgccgat
     4321 gcgctggccg ccgtggacgt cagcccgatc ggtattgccg acgataacga tgcaaaacgc
     4381 atcctgcccg aagtgcgtgc gcacctgaaa ccgtggcagt ccgtcggaac gcgcgcgcag
     4441 ccgagcctgg aagccattgc cgctctgaaa ccagacctga tcattgccga cagcagtcgc
     4501 catgcggggg tttacatcgc cttgcagcaa atcgcgccgg tactgctgct taagtcccgc
     4561 aacgaaacct acgctgaaaa tttgcaatct gcggctatca tcggcgaaat ggtgggtaaa
     4621 aagcgagaga tgcaggcacg tctggaacaa cataaagaga ggatggcgca gtgggccagc
     4681 cagcttccca aagggacacg cgtggccttt ggcacatcac gcgaacagca attcaacctg
     4741 catactcagg agacctggac cggcagcgtg ctggcctctc tggggctgaa cgttcccgct
     4801 gcgatggtgg gtgcgtccat gccgtccatc ggcctggagc aactgctggc ggtcaatcct
     4861 gcctggctgc tggttgccca ctatcgcgaa gagagcattg ttaaacgctg gcaacaagat
     4921 ccgctctggc agatgttaac cgccgcgcag aagcagcagg ttgcttcggt cgacagtaac
     4981 acctgggcgc ggatgcgcgg tatttttgct gcagagcgta ttgccgctga cacggtaaaa
     5041 atcttccacc atcagccgct taccgttgtg aaatgaccgc gataaaacac ccggtgctgc
     5101 tgtgggggct tcccattgca gcacttatta ttattttctg gctgagtctg ttttgctact
     5161 cggccattcc tgtttccgga gcagatgcaa cccgcgccct gctgcctgga cacacgccaa
     5221 cgctaccaga agcgctggtg caaaaccttc gtttgccacg aagcctggtc gccgttctga
     5281 tcggcgcaag cctggcgctc gcgggcacgc tgctgcaaac cctgacccac aacccaatgg
     5341 cctctccttc actgctcggc attaacagcg gcgcggcgct ggctatggcg cttaccagcg
     5401 cgctaagtcc gacgccgatt gcaggctatt ctctgtcgtt catcgcggca tgcgggggcg
     5461 gcgtgagctg gctgctggtc atgaccgcag gaggcggatt tcgtcatacc catgacagaa
     5521 acaaactgat cctcgcgggt atcgcgctgt cggccttttg tatgggcctt acccgcatca
     5581 ccctgctgct ggccgaagat catgcttacg gcatctttta ctggctggca ggcggagtgt
     5641 cccacgcccg ctggcaggat gtctggcagc tcttgccggt ggtggtcact gcagtccctg
     5701 tcgtgttgct gctggcgaat caactgaacc tgctcaacct cagcgacagc accgcccata
     5761 cgctgggagt gaacctgacg aggctacgtt tggtcatcaa tatgttagtg ctgcttctgg
     5821 ttggtgcgtg cgtcagcgtg gcaggtccgg tggcgtttat cggtctgctg gtgccacatc
     5881 tggcgcgctt ctgggcaggc ttcgatcagc gcaacgtact gccagtgagc atgctgctgg
     5941 gggccacgct gatgctgctg gcagatgtac tcgcacgcgc gctggccttc cccggagatc
     6001 tgcccgcagg cgcagtgctg gcgctgattg gcagcccttg ctttgtctgg cttgtgagga
     6061 ggcgaggatg aaaattgcgc tggttatttt catcaccctt gccctggcgg gctgtgcgct
     6121 gttatcactc catatgggag tgatccccgt gccgtggcgc gcgctgctga ccgactggca
     6181 ggccggacgc gagcattatt atgtattgat ggagtaccga ctgccgcgct tgctgctggc
     6241 actgtttgtc ggtgcagccc tcgccgtggc gggcgtgctg atacagggga ttgtgcgcaa
     6301 ccctctggca tcaccggata ttctcggcgt taaccatgcc gccagcctgg cctctgtggg
     6361 ggctctactt cttatgccgt cactgcccgt gatggtgctg ccgctgctgg cctttgcggg
     6421 cggcatggcg gggttgatat tactgaagat gctggcaaag acccaccagc cgatgaagct
     6481 ggcgctcacc ggcgtggcgc tttctgcatg ctgggccagc ctgacggatt atctgatgct
     6541 ctcgcgccca caggatgtga acaacgccct gctgtggctg accggcagct tatggggccg
     6601 tgactggagc tttgtgaaga ttgccatccc gctgatgatt ttatttctgc cgctgagcct
     6661 gagtttttgc cgcgatctcg acctccttgc actcggcgat gcgcgcgcca ccacgctcgg
     6721 tgtgtcggtg ccccataccc gattctgggc tttgttacta gctgtcgcca tgacatctac
     6781 cggcgtggcc gcctgcggcc cgattagctt tattggtctc gtggtgccgc atatgatgcg
     6841 tagcatcacc ggtggacgtc accgcagact gctgcctgtt tcagccctga caggtgcgtt
     6901 gctgttggtg gttgccgatc tgctggcgag aattattcat cccccactgg agctcccggt
     6961 tggcgtgctg accgccatta tcggtgcgcc gtggtttgtc tggttgcttg tgagaatgcg
     7021 ataaatgact ttacgaactg aaaatctgac ggtcagttac gggacagaca aggtacttaa
     7081 cgacgtttca ctctcactgc caacggggaa gatcaccgcc ctgatcggtc ctaacggttg
     7141 cgggaaatcg acgctgttaa actgtttttc gcggctttta atgccgcagt ctggcaccgt
     7201 atttctcggc gataatccca taaatatgct ctcatcgcgc cagttggccc gcaggctttc
     7261 gctgctgcct cagcaccatt taacgccaga ggggatcaca gtccaggagc tggtttcgta
     7321 tggtcgtaat ccctggctgt cactctgggg gcgtctctcc gctgaagaca atgcacgagt
     7381 taatgtcgcc atgaaccaga cccggatcaa tcatcttgcc gttcgtcggt taaccgagct
     7441 ttccggcggt cagcgccagc gcgcatttct ggcgatggtc ctggcccaga atacgcccgt
     7501 tgtattactt gatgagccaa ccacctatct tgatatcaat caccaggtgg acctgatgcg
     7561 gttgatgggc gaactccgga ctcaggggaa aacggtggtc gctgtgctgc acgaccttaa
     7621 tcaggctagc cggtactgcg atcaactggt ggtaatggca aacggacatg ttatggcgca
     7681 aggcacacca gaagaggtga tgaccccagg attgctgaga acagtattca gcgtggaagc
     7741 ggaaatacac cccgagccgg tatctggcag gccgatgtgc ctaatgaggt agattgcaca
     7801 ggccgtaaga accaaaccac gactgaatga aactggactg gcgccagcaa gcctgttcag
     7861 actggggctg aacttttccg gactctgaaa gattaccaat actcatcgtc catccgcttg
     7921 ctttaggctg acaggttcat aattaacgca aaccagagct gtacaggctt gggcgcggct
     7981 ttcaaaccaa tcgtgatcac ggcaatcaat tttgaactct gcttaacgga catttctgta
     8041 taacccttac ggcaacgaaa aacgcgaagt taaaatttta gaaacccaaa aacgtgacat
     8101 gactaagttt agatttcagg ggggggagat caaaaaattt cgctctgtgc cagagcggac
     8161 attcacggag ctggttcatt accaatgagg ttgggctttt gaggataaat caatgatcag
     8221 acgccaacgt aaatcaaaag caaccctgga acggaattgc taatccagtt tctgaccatc
     8281 gatttttcta aaaagtgtgc gtttgctact acttaggtag gtgcagcttt cttaatcacc
     8341 ggcagccacg ttatacaggc cagttgatgg atcgattgtt atcaatgata tcttcatgag
     8401 tcggtgtctc acccagctta ccgaagctgg cataaagtga aggcagacgg gcccgtcctt
     8461 ctcccttttt cgccagaggg aaagcgcgaa gcatggtggc agcctcccag tcacaacaat
     8521 aggatggtgt gcacggctgc tgacgccatg attcagcgat agagccggaa aatacggggt
     8581 caaagccggt atcattaacc agagtcatcg tgacctgtac tgcggctgga tgatctcctg
     8641 ctactgcaac tgctaggcga ccgcggctcc cttcaggtag tctgttgtgg tcaactaaaa
     8701 ctggcctccg cgttagagtt tttccagtat cggttttctg attcgtttgg tggtaaccca
     8761 ccattatatt cgtgcggtct tagtgcgctg taatatccaa cgatatagtc cgttattgcg
     8821 tgagctgcat cgctgaagct tacatagccc gtcgctggca cccattcgtt cttcagactc
     8881 ctgaagaagc gctccattgg gctgttatcc cagcagtttc cacgccgact catactctgc
     8941 ctgatccggt atcgccacag taactgccgg aactgcctgc tcgtataatg actgccttga
     9001 tcgcctggaa catcaccccg acgggcttac cacgggtttc ccatgccatt tccagtgctt
     9061 tcatggtaag cctgctgtcc ggcgagaacg acatggccca gcccactggt tttcttgcga
     9121 acaggtcgag aacaacggcg aggta
//
LOCUS       DAJVUK010000161         9090 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.161, whole genome shotgun sequence.
ACCESSION   DAJVUK010000161 DAJVUK010000000
VERSION     DAJVUK010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9090
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.161"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            52..936
                     /locus_tag="OQQ57_003569"
     CDS             52..936
                     /locus_tag="OQQ57_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HCS1958187.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHHEDADGVALTFELTQSEETKKFCPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="OQQ57_003570"
     CDS             complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="OQQ57_003570"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HCS1958188.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLRDNVFLVSKVYPWNAGRQKAINACEASLRRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISSAQVLLARVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPK
                     GKTALDMV"
     gene            complement(1931..2677)
                     /gene="mipA"
                     /locus_tag="OQQ57_003571"
     CDS             complement(1931..2677)
                     /gene="mipA"
                     /locus_tag="OQQ57_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="scaffolding protein MipA"
                     /protein_id="HCS1958189.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            3113..5047
                     /gene="yeaG"
                     /locus_tag="OQQ57_003572"
     CDS             3113..5047
                     /gene="yeaG"
                     /locus_tag="OQQ57_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HCS1958190.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM
                     AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            5160..6443
                     /locus_tag="OQQ57_003573"
     CDS             5160..6443
                     /locus_tag="OQQ57_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HCS1958191.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAMNKRSVT
                     DVDSGESISIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
     gene            6590..8066
                     /locus_tag="OQQ57_003574"
                     /pseudo
     CDS             6590..8066
                     /locus_tag="OQQ57_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
     gene            8160..8246
                     /locus_tag="OQQ57_003575"
                     /pseudo
     CDS             8160..8246
                     /locus_tag="OQQ57_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            8247..>9090
                     /locus_tag="OQQ57_003576"
     CDS             8247..>9090
                     /locus_tag="OQQ57_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1958192.1"
                     /translation="MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQ
                     KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK
                     YPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDL
                     NDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN
                     VMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGREVAK
                     FSVPL"
BASE COUNT         2392 a         2181 c         2108 g         2409 t
ORIGIN      
        1 cttcggtcgc tctttttttt acctgataaa atgaagttaa aggactgcgt catgattaag
       61 aaaatttttg cccttccggt catcgaacaa atctcccctg tcctctcccg tcgtaaactg
      121 gatgaactgg acctcattgt ggtcgatcat ccccaggtaa aagcctcttt tgcattacag
      181 ggcgcacacc ttctctcgtg gaaacctgcg ggtgaagaag aagttctgtg gttgagcaac
      241 aacacaccgt tcaaaaatgg cgtcgctatt cgcggtggcg taccggtttg ctggccgtgg
      301 tttggtccgg cggcacaaca aggtctgcct gcgcacggtt ttgcccgcaa cctgccgtgg
      361 acgctgaaat cacatcatga agatgctgat ggcgtagcgc tgacttttga attgacgcaa
      421 agcgaagaga cgaaaaaatt ctgtccgcac gactttacgc tgttagcgca tttccgcgtg
      481 ggtaaaacct gtgaaatcga tcttgaatca catggcgaat ttgaaaccac ctctgccctg
      541 catacctact ttaacgtggg tgatatcgct aaggtaagcg tcagtgggct gggcgatcgc
      601 ttcattgata aagtgaatga cgcgaaagaa gatgtactga ccgacggtat tcagaccttc
      661 cctgaccgta ccgatcgcgt gtatctgaat ccgcaagatt gcagcgtgat taatgatgaa
      721 gcgctgaatc gtattatcgc cgtaggccac cagcatcatc tgaacgttgt aggctggaac
      781 ccgggaccgg cgctttcaat tagcatgggc gatatgccgg atgatggcta caaaacattt
      841 gtttgtgtag aaacggctta cgcttcagaa acgcaaaaag tcaccaaaga gaaacctgca
      901 catctggcgc aatccattcg cgttgcgaaa cgttaatttg cgttaatgtt gtgtgccggg
      961 tgcgatgcat ccggcacgta tcaacatcac accatatcca gcgcagtttt tccttttggt
     1021 gccggatacg ctttatccag catggttaat tccgctgacg aaagttcgac ctcaagcaca
     1081 gccgcattct gttgaacatg ggcaatcgtg gccgcttttg gaatcgccat cacaccctga
     1141 tggctgatta ccctcgccaa caatacttgt gccgagctga tattgtgagc atgtgcaatt
     1201 tcgttgacta ccgcgttttt taacagtcca ttgcgcaacc gcccggcctg ggctaatgga
     1261 ctgtaagcca tcaccggcat ctgctgttgc tggcaccagg ggagtagatc gtactcaatc
     1321 cctcgtgaac cgagatggta aagcacctga ttagtggcac actgatttcc ccccggcagc
     1381 tgccagagtt cctgcatatc agcataatca aggttagaaa cgccccagcg gcggattttt
     1441 ccctgggcga tcaatttttc catcgctgca acagtctctt caaaagcgaa actgccagac
     1501 cagtgtaata agtagagatc gagataatca gtattgagac ggcgtaaact ggcttcgcat
     1561 gcatttatcg ctttttgcct gccagcattc cacggataga ctttagagac gagaaagacg
     1621 ttatcacgca gaccggttaa tgcttcccca accacctttt cggcaccgcc atcggcatac
     1681 atttcggcgg tatcaatgag ggttaaaccg agctcaatgc ccgcgcgtag tgcagcaact
     1741 tctgttttgc gctgactggc atcttcgccc atataccatg ttccctgccc tatggctggc
     1801 agtgagacat cgccactaaa ttgaatcatt ttttgttgca ttgtttcctc ccaggtattg
     1861 caccaccgta atgcaaaaca gggcgtgacg ccctgttttt atgcacaaaa tgccctggaa
     1921 agatgcatta tcagaatttg taggtgatcc cggtagaaat caggccagtc caggatttat
     1981 ccaccatcgg gctgtcagta acttcatcag acagacgggt atagcgcgcg gtaccgtaaa
     2041 cactccagtc gccgaggaag ttgtagctgg cgctcagctc caggtaaggg ctccagctgt
     2101 cgttcgggtt atagccacgc agaccgctgc gagcggactc tttgcgcgat acgccataat
     2161 agtattcgtt ctggttttcg ctgttccact gcacaccaat acccggagtc acggtcaggc
     2221 caccgttggt gtaacgatac aaccaggcca tatcccagac aatgccgttg ctgttatcca
     2281 gggtatcgcc agccagggtg gtacgcaggt aaccgtactg ggtaaagtga gcataagaca
     2341 gaccagccat catggtgctc ttacggtcat ccaggtgacg catttggtga tcgccactgt
     2401 ctttcgcttt gaagtaaagc ggcgaccagt aagcggtaat tgaaagttta tccgttgcgt
     2461 cattccacag gtagtaacca ccacctaagc cacggaacca gaagttatcg ccttcatagt
     2521 tgattaccgg tactgggtaa acatcggtat cgtaatcttt atatgggtgc tcaacgacac
     2581 ctacgcctgc gcccaaggaa aatttacctt cagcgtgcgc tacgcctgca gacgttgcga
     2641 taagcactcc aagtgccaga agtttgagtt tggtcacaat taatcattcc ttaaacaaat
     2701 gtttagcggg cgacaaagtt tacccgtcaa tacatcgaaa cccaaccttt ttacgttttc
     2761 attttttaaa gtaactgttt aattttcctg ccgcggatga caccgcgctt acagccaaat
     2821 gaatttagcg ttactggcga gcctggtctt tacattaatt atgcaaaatt tatggatgag
     2881 ttgttgatat gccattgaaa ttaagaaagc cgtgcaggca agttttccat ttgccatcta
     2941 cgcttaattt tgaaggtgta tcaccgggca cgttgttctc atcgtcgata aaatggcatg
     3001 agagttgctg tgttttagca agagacgtcg ttcagtttac ctcttccggg aggctctact
     3061 attcatatga acggctctta acctgtgcta aaaaacgaaa ggacggcata ccatgaatat
     3121 attcgatcac tatcgccagc gatatgaagc tgccaaggac gaagagttca cactgcagga
     3181 gtttcttacc acttgtcggc aagatcgcag tgcttatgcc aacgcggctg agcggctatt
     3241 gatggctatc ggtgagcctg tcatggtcga tacagcccag gaacccagac tttctcgact
     3301 cttttctaac cgggtcattg cacgttatcc ggcgtttgaa gagttttacg gcatggaaga
     3361 cgcgattgaa cagattgtct cttatctgaa acacgcggct caggggctgg aagagaagaa
     3421 acaaatcctg tatctgctgg ggcctgtggg tgggggtaaa tcatcgcttg ctgagcgact
     3481 gaaatcatta atgcagctcg taccgattta tgtattgagc gccaacggtg agcgtagccc
     3541 ggtcaacgat catccgttct gtcttttcaa tccgcaggaa gatgcgcaga ttctggaaaa
     3601 agagtatggc attcctcgcc gttatctcgg caccatcatg tcgccgtggg cggcaaaacg
     3661 cctgcatgaa tttggtggcg atatcactaa gttccgggta gtgaaggtct ggccgtcaat
     3721 tctgcaacaa attgctatcg ccaaaacgga acccggcgat gagaacaacc aggacatctc
     3781 cgcgctggtt gggaaagtcg atattcgtaa actcgaacac tacgcgcaga atgacccgga
     3841 cgcctacggc tattccggtg cgctgtgccg cgccaatcag gggatcatgg aattcgttga
     3901 gatgtttaaa gcaccgataa aagtgctgca tcccttgtta accgccactc aggaaggtaa
     3961 ctacaacggg acggaaggta tctccgccct gccgttcaac gggattattc tcgcccactc
     4021 gaacgagtcc gaatgggtca ctttccgtaa taacaaaaac aacgaagcct tcctcgaccg
     4081 tgtttacatc gtgaaggtgc cgtattgctt gcgcatttcc gaagagatca aaatctacga
     4141 gaaattgctt aatcacagtg aattgactca cgccccatgc gcccctggca cgctggaaac
     4201 actgtcacgt ttttccattc tttcgcgcct gaaagagcca gaaaactcca gcatttattc
     4261 aaagatgcgg gtttatgatg gcgaaagtct gaaagacacc gatcccaaag ccaagtcgta
     4321 tcaggaatat cgtgactacg ccggtgtcga tgaagggatg aacggtctgt cgacgcgttt
     4381 tgcgtttaag atcctctccc gcgtgttcaa cttcgatcat gtagaagtgg cggcaaaccc
     4441 ggtccatctg ttctacgtcc tggaacagca gatcgagcgc gagcagttcc cgcaagagca
     4501 ggcagaacgc tatctggagt tcctgaaagg ttatctgatc ccgaaatatg ccgagtttat
     4561 cggcaaagag atccagacgg cctaccttga atcctattcc gaatatgggc aaaacatttt
     4621 cgaccgttat gttacctacg cggatttctg gattcaggat caggagtatc gcgatccgga
     4681 taccgggcag ctgtttgacc gcgagtctct taacgccgag ctggagaaaa tcgagaaacc
     4741 ggcggggatc agtaatccaa aagatttccg caacgagatt gttaacttcg tactgcgcgc
     4801 cagagcgaat aacagcggac gcaatccgaa ctggaccagc tatgaaaaac tgcgcacggt
     4861 tatcgagaag aaaatgttct ccaataccga ggagctgttg ccggttatct cgtttaacgc
     4921 caaaacgtca accgacgagc agaagaaaca cgacgacttt gtcgaccgta tgatggaaaa
     4981 aggctacacc cgtaaacagg tgcgtttact gtgcgaatgg tatttgcgcg tacgtaaatc
     5041 gtcttaacaa ccctggcccg gtacacatgc taccgggcct acaacgacag cgaaccgtgg
     5101 gccagagaaa tggcaacaca ggcgtagcat acagttggca aatgtagtac ggggggcata
     5161 tgacctggtt tattgaccgg cgtctgaacg gcaaaaacaa aagcatggtg aatcgccagc
     5221 gttttttacg ccgttataaa gcgcaaatta aacagtcgat ctccgaggcc atgaataagc
     5281 gttcggtgac tgacgtcgac agcggcgaat ccatatccat tcccacggaa gatattagcg
     5341 aaccgatgtt tcatcagggg cgtggcggcc tgcgccaccg cgtacatccg ggcaatgacc
     5401 atttcgtcca gaacgaccga attgaacgtc cccagggtgg cggcggaggt tccggcagtg
     5461 gtcagggcca ggccagccag gatggtgaag gtcaggatga atttgtcttt cagatttcga
     5521 aagatgagta tcttgatctg ctctttgaag atttggcctt accgaatctg aaacaaaacc
     5581 aacaacgcca gctgaccgaa tataaaacgc atcgggcggg ttataccgct aacggcgttc
     5641 cagccaatat cagcgttgtg cgttccttgc agaactcact ggcgcgacgc acagccatga
     5701 cggcgggcaa gcgacgggaa cttcatgcgc tggaagagaa tttggccatc atcagcaaca
     5761 gtgaacctgc gcaactgctg gaagaggaac gtctgcgcaa agaaattgca gaattacgtg
     5821 ccaaaattga acgcgtccct tttattgaca ccttcgattt acgttacaag aactacgaga
     5881 agcggcccga tccctccagc caagcagtga tgttttgcct gatggacgtt tccggttcaa
     5941 tggatcaatc cactaaagat atggctaagc gtttttatat tctgctgtat ctgttcctca
     6001 gcagaacgta taagaacgtg gaagtcgtat acatccgcca tcatacccaa gcgaaagaag
     6061 tcgatgaaca tgagtttttc tactcgcagg aaacaggcgg caccattgtt tccagcgccc
     6121 tgaaactgat ggatgaggta gtgaaagagc gttataaccc ggcacagtgg aatatttacg
     6181 ctgcacaagc atcggacggc gataactggg ccgatgactc tccgctttgc catgaaatcc
     6241 tggcgaaaaa attattacct gttgttcgtt attacagcta tatcgaaatt acccgtcgtg
     6301 cacatcagac attgtggcga gaatatgagc atctgcaatc tactttcgac aactttgcga
     6361 tgcagcacat ccgcgaccag gatgatattt atccggtgtt ccgtgaactg tttcataaac
     6421 aaaatgcaac agctaaagac taaaactatc agccaggtca ttatcgcctg gctgattttt
     6481 agcttactgt aaattatctc atttattaca tacattagct tacaatcgct ttaaatatga
     6541 cagcataacc tttacataat ttagttccag aaaacaatca ttcggaaaaa tgattcagtc
     6601 aacacgtatt tccatggggt tattctttaa atatttttta tcgttaacga aaattgatcc
     6661 tggtcaaaac tatatatctc tgccatcaat aaaatccagc actcacattg ctctcctttt
     6721 tatggtttct atgggtacac aaaaattaaa agctcaaagc ttttttattt tcagtttatt
     6781 gctgacatta attttatttt gcattactac cttatataac gaaaacacaa atgtaaaact
     6841 catcccacag atgaattacc tgatggttgt tgtggctttg tttttcctta acgccgtcat
     6901 ttttcttttc atgttaatga aatatttcac taacaaacaa attttaccaa cactcatttt
     6961 aagccttgca ttcttaagtg gccttatcta tttagttgaa accattgtaa ttatccataa
     7021 accaattaac ggcagtacac tgatccagac aaagtcgaat gatgtttcta ttttctatat
     7081 tttccgccaa ctcagtttta tttgtttaac ctcgctggca ctcttttgtt atggaaaaga
     7141 caacatcctt gacaacaata agaaaaaaac gggaatcctg ttgctggcgt tgattccttt
     7201 tttagttttt ccccttctgg cacacaatct gagcagttat aactgctgac tattctttgt
     7261 atgtcgtcga ctactgtccg gacaaccata ctgcgaccag gggaatcaac tatacaaaaa
     7321 tattggtttg tctgtgggca tttttactgt tctttattat catgcgtaca cgattagcca
     7381 gcgaactatg gccgttaata gcattattat gtctggcatc gctatgctgc aacttacttc
     7441 tactgactct ggatgagtat aattacacca tctggtatat cagtcgcggg attgaagttt
     7501 ccagtaaact gtttgttgtg tcttttctga tttataacat ttttcaggag ctgcaactct
     7561 ccagcaaact ggcagttcat gatgtgctga ccaatattta taatcggcgc tactttttca
     7621 acagcgtaga gtcattattg tcgcgacctg ttgttaagga cttctgtgtc atgctggttg
     7681 atattaatca gttcaaacgc atcaatgccc aatggggaca tcgtgtgggt gataaagtgc
     7741 tggtttcaat tgtcgatatt atccagcaaa gcatccgccc tgatgatatt ttagcgcgac
     7801 tggagggtga ggtgtttggc ttgctattta ccgaactcaa tagtgcccag gcaaaaatca
     7861 ttgcggatcg tatacgtaaa aatgtcgaac tcctgaccgg ctttagtaac agatatgatg
     7921 ttcctgaaca aatgaccatc agtattggca cggttttttc aacgggtgac acgcgtaata
     7981 tctcgcttgt catgacggaa gcagataaag ccttacgcga agcgaaaagc gaggggggca
     8041 acaaagtgat tattcatcat atttaagtgc aaaaatattc agagccatgc tttttgcgtg
     8101 gcttttgcat acaatttatt actattaccc ctaaatttcc cctccccagc ggcgcagaga
     8161 tgagtataat tagcgcccct gtgccaggcc gcaatcgaac tttatctggt tttctcgttt
     8221 cactaactga aggagtgcca tttatcatga aattgcacca tagaatgctc cggcatttta
     8281 tcgccgcaag tgtcattgtg ctgacatctt ccttccttat ttttgaactt gtcgccagcg
     8341 acagagcaat gagtgcctat ctgcgctata tcgtgcagaa agcagactcc tcctttcttt
     8401 atgataagta tcagaatcag agtattgccg cgcatgtgat gcgcgctctc gctgctgagc
     8461 agtcggaagt gtcgccagaa cagcggcgcg ccatctgcga ggcttttgag tctgccaata
     8521 atacccatgg cttaaacctg actgctcata aatacccggg cttacgcggc acactacaaa
     8581 ccgcatccac tgactgcgac acaattgtgg aagctgcagc actattaccc gcttttgatc
     8641 aggcagtgga aggcaaccgc caccaggatg attacggttc aggtcttggg atggccgaag
     8701 agaaatttca ctattatctc gatctcaatg accgctatgt ctatttttat gagccggtta
     8761 atgttgaata ctttgcgatg aataactggt ccttcctgca gtcaggaagt attggtatcg
     8821 atcgcaaaga tattgaaaag gtatttaccg ggcgtaccgt attgtcgagc atttaccagg
     8881 atcagcgtac taaacagaac gtgatgagtt tgctgacgcc ggtgtatgtt gcagggcagc
     8941 taaaagggat tgtgctgctg gatattaaca aaaacaattt gcggaatatc ttttacactc
     9001 atgaccgccc tctcctctgg cgttttctca atgtcacgct aaccgatacc gattcggggc
     9061 gtgaagtggc caaattcagt gtgccacttc
//
LOCUS       DAJVUK010000162         9039 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.162, whole genome shotgun sequence.
ACCESSION   DAJVUK010000162 DAJVUK010000000
VERSION     DAJVUK010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9039
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.162"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1005
                     /locus_tag="OQQ57_003577"
     CDS             <1..1005
                     /locus_tag="OQQ57_003577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HCS1958193.1"
                     /translation="PKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDI
                     TAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQ
                     KQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKV
                     PELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPR
                     HWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWL
                     GFVLDNRIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR
                     "
     gene            complement(1007..1339)
                     /locus_tag="OQQ57_003578"
     CDS             complement(1007..1339)
                     /locus_tag="OQQ57_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HCS1958194.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSHVEKSEANAQATNAVI
                     PPARMPDN"
     misc_feature    1579..1651
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01832"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ROSE (Repression Of Heat Shock gene Expression)
                     occurs in the 5'-region of heat shock genes and acts as an
                     RNA thermometer to modulate expression; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF01832"
     gene            1645..2058
                     /gene="ibpA"
                     /locus_tag="OQQ57_003579"
     CDS             1645..2058
                     /gene="ibpA"
                     /locus_tag="OQQ57_003579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HCS1958195.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     gene            2170..2598
                     /gene="ibpB"
                     /locus_tag="OQQ57_003580"
     CDS             2170..2598
                     /gene="ibpB"
                     /locus_tag="OQQ57_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HCS1958196.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            2794..4455
                     /locus_tag="OQQ57_003581"
     CDS             2794..4455
                     /locus_tag="OQQ57_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HCS1958197.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAPALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(4452..5168)
                     /locus_tag="OQQ57_003582"
     CDS             complement(4452..5168)
                     /locus_tag="OQQ57_003582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCS1958198.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            5463..7079
                     /locus_tag="OQQ57_003583"
                     /pseudo
     CDS             5463..7079
                     /locus_tag="OQQ57_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
     gene            7079..8402
                     /locus_tag="OQQ57_003584"
                     /pseudo
     CDS             7079..8402
                     /locus_tag="OQQ57_003584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
     gene            complement(8533..8964)
                     /gene="tnpA"
                     /locus_tag="OQQ57_003585"
                     /pseudo
     CDS             complement(8533..8964)
                     /gene="tnpA"
                     /locus_tag="OQQ57_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            8972..>9039
                     /locus_tag="OQQ57_003586"
     CDS             8972..>9039
                     /locus_tag="OQQ57_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958199.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRR"
BASE COUNT         2102 a         2257 c         2379 g         2301 t
ORIGIN      
        1 ccgaagtcag agaaatatgt tttcatccat ggcccggaaa atcctgatga aacatggtat
       61 tacgatttcc atcatcgacg cggagtcatt gctgaaggcg gcaaggtgag caatctcgat
      121 gcaatggata ttaccgcgcc gtatacgcca ggagcgctgc gcggcggcag ccatgtgcat
      181 gtctttagcc cgaacggtga aagggtgagc tttacctata acgaccatgt aatgcatgaa
      241 ctcgatccgg cgctggattt gcgaaacgtc ggtgttgctg cgccgtttgg cccggtcaac
      301 gtacaaaagc agcatccgcg tgaatacagc ggtagccact ggtgcgtgct ggtgagtaaa
      361 accacgccca cgccgcagcc tggcagcgat gaaatcaatc gtgcttatga agaaggatgg
      421 gtaggaaatc acgcgctggc gtttattggc gacacacttt cgccaaaggg cgagaaagtg
      481 ccggagctgt ttatcgttga gttaccgcaa gatgaagctg gctggaaagc ggcaggtgat
      541 gcgccgttaa gtggaacgga aaccaccctg cccgcgccac cgcgcggcgt cgtgcagcga
      601 cgtttaacct ttacccacca tcgggcttat ccggggttag tcaacgtccc gcgccactgg
      661 gtgcgctgta atccgcaggg tacgcaaatc gcgtttttaa tgcgtgatga taacggcatt
      721 gtgcaactgt ggcttatctc gccacagggc ggcgagccgc gccagttaac ccataacaaa
      781 acggatattc agtctgcatt taactggcat ccgtcaggag aatggttggg ctttgtgctg
      841 gataatcgaa ttgcttgtgc ccatgcgcaa agtggcgagg ttgagtattt aaccgaaagc
      901 cacgccaatc caccttctgc ggacgccgtg gtcttctcgc cggatggtca atggctggcg
      961 tggatggaag gcggccagct gtggatcacc gaaactgatc gctaaatcag ttatcaggca
     1021 ttctggccgg tggaataacc gcattggtgg cttgcgcgtt ggcttcgctt ttttcaacgt
     1081 gtgagcgcac cgagctgtct ttgcggaaca catcccacgg cagtaaaagc gtgtccatca
     1141 cagcggtaaa cggcatatcg agaatcgcca gcgacttagt gccccagttg gtttcatcgt
     1201 cgccaatcat ggttgcgctg gcgcgggtgc cgggatacgt tccttctttc cctccggtat
     1261 gggacatcac gctggagcat cctccgagta atgtcattcc gctgcatatc atgaacgcta
     1321 acaacacatt tcttatcata ataaattcat ctgttgatcg tgggtgttgg cctgatgagt
     1381 tatagcgatc ccttgctgaa aataacatca tcattacgtc gcactgtggc ggctatcgca
     1441 ctttaacgtt tcgtgctgcc ccctcagtct atgcaataga ccataaactg caaaaaaaag
     1501 tccgctgata aggcttgaaa agttcatttc cagacccatt tttacatcgt agccgatgag
     1561 gacgcgcctg atgggtgttc tggctacctg acctgtccat tgtggaaggt attacattct
     1621 cgctgatttc aggagctatt gattatgcgt aactttgatt tatccccgct ttaccgttct
     1681 gctattggat ttgaccgttt gtttaaccac ttagaaaaca accagagcca gagtaatggc
     1741 ggctaccctc cgtataacgt tgaactggta gacgaaaacc attaccgcat tgctatcgct
     1801 gtggctggtt ttgctgagag cgaactggaa attaccgccc aggataatct gctggtggtg
     1861 aaaggtgctc acgccgacga acaaaaagag cgcacctatc tgtaccaggg catcgctgaa
     1921 cgcaactttg aacgcaaatt ccagttagct gagaacattc atgttcgtgg ggctaacctg
     1981 gtaaatggtt tgctgtatat cgatctcgaa cgcgtgattc cggaagcgaa aaaaccgcgc
     2041 cgtatcgaaa tcaactaatt ccctaaggcc gcctgacgcg gcctgacatc tccatgctcg
     2101 ccgtcaggga gcatatgcga atcttcggat ttgcaggtac ttactcgctt cttagaagga
     2161 gaaatgacta tgcgtaactt cgatttatcc ccactgatgc gtcaatggat cggttttgac
     2221 aaactggcca acgcactgca aaacgccggt gaaagccaga gcttcccgcc gtacaacatt
     2281 gagaaaagcg acgataacca ctaccgcatt acccttgcgc tggcaggttt ccgtcaggaa
     2341 gatttagaga ttcaactgga aggtacgcgc ctgagcgtaa aaggcacgcc ggagcagcca
     2401 aaagaagaga aaaaatggct gcatcaaggg cttatgaatc agccatttag cctgagcttt
     2461 acgctggctg aaaatatgga agtctctggc gcaaccttcg taaacggttt actgcatatt
     2521 gatttaattc gtaatgagcc tgaacccatc gcagcgcagc gtatcgctat cagcgaacgt
     2581 cccgcgttaa atagctaact agctattctc tttgccccgc cattctggtg gggctttttt
     2641 tgtctttctt cttcaacaat gcgttaaatt tcgactgttt aagatatttc ggcacgttct
     2701 ttcccgtgat aatgtgcgct ataaggcaaa tctgcttcac cgattcagcc ataatccgta
     2761 gcaattaaaa tgttatctca agagaaatgg acgatgagtg atatagcatt aacggtcagt
     2821 attctggctt tggtggcagt cgtcggtttg tttatcggca acgtcaaatt tcgcggcata
     2881 ggattaggta ttggcggcgt gctgtttggt gggatcatcg tcggccattt tgtttctcag
     2941 gcggggatga cattaagtag cgatatgctg catgttattc aggaatttgg cctgatcctg
     3001 ttcgtttata ccatcgggat tcaagtaggg ccgggcttct ttgcctcatt gcgcgtctcc
     3061 ggattacgcc tcaacctgtt tgctgttctg atcgtcatca tcggtggtct ggttaccgcc
     3121 atcctgcata aactgtttga tattccactg ccggtagtgc tggggatttt ctccggtgcg
     3181 gttaccaata cgccagcgct gggggcaggg cagcagatct tgcgcgacct gggtacacca
     3241 atggaaatgg tcgatcagat ggggatgagt tacgcgatgg cgtatccatt cggcatttgc
     3301 gggattttgt tcaccatgtg gatgttgcgg gttattttcc gcgtcaatgt cgagacagaa
     3361 gctcagcagc acgagtcttc acgcaccaat ggcggcgcgc tgatcaagac tatcaatatt
     3421 cgcgttgaga accctaacct gcatgattta gctattaaag atgtaccgat tctcaacggc
     3481 gacaaaatta tctgctcgcg tctgaaacgc gaagaaaccc taaaagttcc ttcgccagat
     3541 accattatcc aactgggcga tttgctgcat ctggtggggc agccagcgga tttacataat
     3601 gcgcaactgg tgattggtca ggaggtcgat acttcgctgt ccacgaaagg cactgatttg
     3661 cgcgtcgagc gtgtggtggt caccaatgaa aacgtgctcg gaaaacgtat tcgcgacctg
     3721 cactttaaag aacgctatga cgttgttatc tcgcgcctga accgtgccgg ggtcgaactg
     3781 gtcgccagtg gcgatatcag cctgcagttc ggcgatatcc tcaatctggt ggggcgtccg
     3841 tccgcaattg atgccgttgc caatgtgctg gggaatgcgc agcaaaaact gcaacaggtt
     3901 cagatgctgc cagtgtttat tggcatcggg cttggcgtat tgttaggttc tattcccgtc
     3961 tttgtgcctg ggttcccggc cgcgttgaaa ctggggctgg cgggcggtcc gctgattatg
     4021 gcgttgatcc tcgggcgtat cggcagtatc ggcaagctgt actggtttat gccgccaagt
     4081 gccaacctcg cgctgcggga gctggggatc gtgctgttcc tctcggtcgt tggtctgaaa
     4141 tctggtgggg attttgtgaa taccctggtc aatggcgaag ggctaagctg gattggttat
     4201 ggtgccctga tcaccgccgt tccgctgatt actgttggca ttctggcgcg gatgttagcc
     4261 aaaatgaatt acctgaccat gtgcgggatg ctggcaggtt ccatgaccga tcctccggcg
     4321 ctggcgtttg ctaataatct tcatccaacc agtggtgcgc cggcgctctc ttacgccact
     4381 gtctatccgt tagtgatgtt tctgcgaatt atcacccccc aattactggc ggtgctcttc
     4441 tggagtatcg gttaactctt ttccgggtgg agtcgccgta aatggtactc cacctggtat
     4501 tcgctggcat ttctgaacat cactgaataa ttcaaaaact ccccgctctc gctatatgac
     4561 aacgaggtga tccgcagcag tggcgtgtgt tccgctacct tcatttgccg cgccagcagt
     4621 ctatcggcga gcaccggcgt caggctttca taattaccgc caatcaaaat cccacactct
     4681 tgttcaatat attcaaactt cgacccttcc agatgttgca gcgaaagatt acggaacagt
     4741 ttaaccggca tatagctgtc ttccagcatc agcggtttcc cttccacaaa acgaacgcga
     4801 cgggagaagt agatctgctc gttgatttga atccgtaact ggctggcaat ggccggaggc
     4861 gcaggcatga tttcaaaaat cagcacctgg ctggtgaccg tttttccctg ccgttttaac
     4921 acctccacca gtccggtcag gctggcggtt tgatgcagca catctttgcg caccaggtaa
     4981 gtgccgctgc cgtggcggcg gaccaccagc ccccacgcta ccagcaggtc aatcgcttta
     5041 cggatggtca tccgggatac tgcaaattct tccgccaact ttttttcacc gggaagaagg
     5101 ctgtttagcg tgaaatccgc ggaattaagt cgaattctta accgctccgc aatgcttttg
     5161 tagatcatct ctagatctct tttttgcctg caagcccggg taatgcgccc acaagttctg
     5221 cttaatcgat tgaaaaaaca tcttttttta aagatgtgtt cgatgctgtg taccagtgct
     5281 cacagatgtc tactttttcg cgaaaacgta gatctctacc gcccaacgaa aagcatgaaa
     5341 gcgatcacga atcccattgg gtcgtcatgt tctgccgatc gcatcttcct atcctcgctc
     5401 caggcctgcc gcataaccaa tcaggcttcc tacttacaga attgagaaaa gaggatgtgg
     5461 aaatgctcag tcaaattcaa cgctttggcg gcgcgatgtt cacgccagtg ctgctgtttc
     5521 ccttcgccgg gattgtggtg ggtcttgcca tcttgctgca aaacccgatg tttgtcgggg
     5581 aatcactgac cgatccgaac agtttattcg cgcaaatcgt acacattatt gaagagggcg
     5641 gttggacggt attccgtaat atgccgctga tttttgctgt cggtttaccc attggccttg
     5701 ctaagcaagc gcaggggcgt gcttgtctgg cggtgatggt gagtttcctg acctggaact
     5761 atttcatcaa cgcgatggga atgatctggg gaagctactt cggcgtcgat ttcactcagg
     5821 acgcggtggc aggtagcggt ctgacaatga tggccgggat taaaaccctc gataccagca
     5881 ttatcggcgc aattatcatt tccggcattg tgacggcgct gcataaccgt ctgttcgata
     5941 aaaaactgcc ggtttttctc ggcattttcc aggggacgtc ttatgtggtg attatcgcct
     6001 tcctggtgat gatcccctgt gcctagctga cgttgctcgg ttggccaaaa gtacaaatgg
     6061 ggattgaatc tctgcaagcg ttcctgcgtt cggcgggtgc gcttgggggg tgggtttaca
     6121 ccttcctcga acgtattctg atcccaaccg gtttacacca cttcatctac ggacagttta
     6181 tctttggtcc ggcagctgtt gaaggcggca ttcagatgta ctgggcgcag catctgcaag
     6241 agttcagtct gagcgccgag ccgctgaaat cgttgttccc ggaaggcggt tttgccctgc
     6301 acggtaactc aaaaatcttt ggtgccgtgg gcatttcttt agcgatgtac ttcactgccg
     6361 caccggaaaa tcgggtaaaa gtggcgggct tgctgattcc cgcaacctta accgccatgc
     6421 tggtgggaat taccgaaccg ctggaattta ccttcctgtt catttcaccg ttgctgtttg
     6481 cggtacacgc cttgctggcg gcctcaatgt cgaccgtgat gtatctcttt ggtgtggtgg
     6541 gcaacatggg cggaggtctg attgaccagg ttttaccgca aaactggatc ccgatgttca
     6601 gcaaccacgc ggatatgatg ctgacccaaa tcgccattgg gttgtgcttt accctgctgt
     6661 acttcgtggt tttccgcaca ctgattctgc aattcaacat gtgcacgccg ggacgtgaag
     6721 atgcggaagt gaaactctac tcaaaagccg aatacaaagc ctcgcgaggc caaaccaccg
     6781 ctgcagagcc aaaaaaagag ctggatcagg ctgccggtat cctgcaagcc ctgggcgggg
     6841 tcggcaatat ctccagcatt aacaattgcg cgacgcgttt acgtattgca ctgcatgaca
     6901 tgtcacaaac gctggatgac gaagtcttta aaaagctggg agcgcacggc gtcttccgta
     6961 gtggcgatgc cattcaggtg atcattggtc tgcatgtatc ccagctgcgt gaacagctcg
     7021 atagcttaat taattctcat caatcagcag aaaatgttgc cattacggag gcagtataat
     7081 gaccaaattc tcagtggttg tcgcaggcgg tggaagcacc tttacgccag gcatcgtgtt
     7141 gatgctcctg gcgaatcagg accgtttccc gcttcgtgca ctgaaatttt atgataacga
     7201 tggtgcgcgg caggaagtga ttgccgaagc ctgtaaagtc atccttaaag agaaagcgcc
     7261 ggacattgcg tttagttaca ccaccgatcc tgaagtggca ttcagcgacg ttgattttgt
     7321 catggcgcac atccgcgtcg gcaaataccc gatgcgcgaa ctggatgaaa aaatcccgct
     7381 gcgccacggc gttgttggtc aggaaacttg cggacccggc ggaatagcgt acggcatgcg
     7441 ttccattggc ggcgtcctgg aactggtgga ttatatggaa aaatattcac caaatgcctg
     7501 gatgctcaac tactccaacc cggcagcaat tgtcgcagaa gccacgcgtc gtctgcgccc
     7561 gaatgcgaaa atcctcaaca tctgtgacat gccaatcggt attgaaagcc ggatggcgca
     7621 aattgttggg ctgcaagatc gcaaacagat gcgcgtgcgc tactacggcc tgaaccactt
     7681 tggctggtgg acatcaattg aagatttgca gggcaacgac ctgatgcccc agctgcggca
     7741 atatgtctct aagcacggtt atgttccacc gcagcaagat acacatactg aagcgagctg
     7801 gaacgacacc tatgcaaaag cgcgggatgt ccaggcactg gacccggata cattgccgaa
     7861 cacctatctg aaatattatc tcttcccgga ttatgttgtt cagcattcca accctgaaca
     7921 tacccgcgcg aatgaggtga atggaacatc gcgagaaaca ggttttcgat gcttgccgcg
     7981 ccattacagc ggcaggaaat tcagcggcgg ccaagctgga gattgacgaa catgcgtcat
     8041 acatcgtcga tctggcggcg gcaattgcct tcaacactca ggagcggatg ttgctgattg
     8101 tgcctaacaa cggggcaatc cataactttg atgatgaagc gatggtcgag atcccgtgtc
     8161 tggtcgggca caacggacca gaaccactgg tggtcggcga tatcccgcag tttcagaaag
     8221 ggttaatgag tcagcaagtg gcggtggaaa aactggtcgt ggacgcctgg gaacagcgtt
     8281 catatcagca cctgtggcag gcgattacgt tatcgaaaac ggtaccgagc gcctcggtcg
     8341 ccaaagctat tctggatgag ttgctggagg ccaacaaagc gtactggcca gagttacgtt
     8401 aattgtgtgg actggcatcc gttgggtgct ggtccgtatt ctttagcacg gctgacggcg
     8461 cataaccaaa tttatccggt gcgccgtaaa accccgtcct tcagggcggg gatataaggc
     8521 gcggttttcc acctaaccag gtgtttgctg ttgttcaatg tattggcgga tgacggatat
     8581 tggcgcacct ccgcagctat tggcaaaata gccaggactc cacaaaacgc ctttgtagta
     8641 atacctgact gcaatatctg gtcgatctcg tcgcagtaac ctacccgata cgcctttgag
     8701 gctgtttacc agactggata tcgccagttt gggaggatag ttaattaaca aatggacgtg
     8761 atctggttcg ccatccattt aaaccagttc agcttcaaaa tcagcacata catttgaaaa
     8821 gtaagtgcgt agtttttctg tcgcgtcata gtcaaaaatc tgacgtcggt atttggtgac
     8881 aaagaccagg tgaacatgca tcaggaaaac acaatgcctt ccacgccgga tatcggtttc
     8941 ttttttcaca gaccaaagta tcatttggcc tgtgaaacga ctacaagcat ttaaattcca
     9001 gttaagaccc ggtggtcaac aggagcgtga aatgaggcg
//
LOCUS       DAJVUK010000163         8756 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.163, whole genome shotgun sequence.
ACCESSION   DAJVUK010000163 DAJVUK010000000
VERSION     DAJVUK010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8756
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.163"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            197..1030
                     /gene="ppsR"
                     /locus_tag="OQQ57_003587"
     CDS             197..1030
                     /gene="ppsR"
                     /locus_tag="OQQ57_003587"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HCS1958200.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRTANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
     gene            1186..2232
                     /gene="aroH"
                     /locus_tag="OQQ57_003588"
     CDS             1186..2232
                     /gene="aroH"
                     /locus_tag="OQQ57_003588"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HCS1958201.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTE
                     RLVEKLASAVDTRF"
     gene            2364..2555
                     /gene="hemP"
                     /locus_tag="OQQ57_003589"
     CDS             2364..2555
                     /gene="hemP"
                     /locus_tag="OQQ57_003589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HCS1958202.1"
                     /translation="MRYTDSRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(2559..3995)
                     /locus_tag="OQQ57_003590"
     CDS             complement(2559..3995)
                     /locus_tag="OQQ57_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HCS1958203.1"
                     /translation="MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNIELANTLSIP
                     SSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLW
                     FSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRGRLQQDEVSDSERQQLIQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(4058..4771)
                     /gene="ydiV"
                     /locus_tag="OQQ57_003591"
     CDS             complement(4058..4771)
                     /gene="ydiV"
                     /locus_tag="OQQ57_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
                     /protein_id="HCS1958204.1"
                     /translation="MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIP
                     TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAG
                     ELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
                     RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHAL
                     QGCLWPAVPINQITTLVQR"
     gene            complement(5017..5481)
                     /locus_tag="OQQ57_003592"
     CDS             complement(5017..5481)
                     /locus_tag="OQQ57_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HCS1958205.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDKLLPGDL
                     VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
     gene            complement(5559..6308)
                     /gene="btuD"
                     /locus_tag="OQQ57_003593"
     CDS             complement(5559..6308)
                     /gene="btuD"
                     /locus_tag="OQQ57_003593"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HCS1958206.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVGLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLILTI"
     gene            complement(6308..6859)
                     /gene="btuE"
                     /locus_tag="OQQ57_003594"
     CDS             complement(6308..6859)
                     /gene="btuE"
                     /locus_tag="OQQ57_003594"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
                     /protein_id="HCS1958207.1"
                     /translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
                     QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE
                     GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQ
                     RFSPDMTPEDPIVMESIKLALAK"
     gene            complement(6922..7902)
                     /gene="btuC"
                     /locus_tag="OQQ57_003595"
     CDS             complement(6922..7902)
                     /gene="btuC"
                     /locus_tag="OQQ57_003595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HCS1958208.1"
                     /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISLGDWF
                     TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
                     ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGASALLLADIVARLALAAAELLIGVVTATLGAPVFIWLLLKARR"
     gene            complement(8111..8440)
                     /locus_tag="OQQ57_003596"
     CDS             complement(8111..8440)
                     /locus_tag="OQQ57_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000997174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958209.1"
                     /translation="MNDDLERRVSCLESDVTEIKNNLITLTTRSESFATKSDVLEIRE
                     GLRLEMAESRQSLKSEMADLRQSLKVEMAEHRTELQKSFANQTWLLTGIVLSAMAVLV
                     AVVTVIK"
BASE COUNT         2307 a         2318 c         2001 g         2130 t
ORIGIN      
        1 gcgttgcgca aacctgctct attcgacaat ttccacataa accatcggta taaacgaaac
       61 cataaaaatg aaatgctgtt ttcataaaaa ataaaattga aggttcattt tataaaccag
      121 acattacctc ctacgcttct gtgcgttttt aatttatgct ttcatagaat tatgtctgca
      181 tcacgggaag aacaaaatgg ataatgctgt tgatcgccac gttttttata tttctgatgg
      241 tacggcaata actgcggagg tattaggaca cgcagtaatg tcacaatttc ccgtcactat
      301 cagcagcatt acgctgccgt ttgtcgaaaa tgagagccgt gcacgggcag tgaaggatca
      361 gattgacgca atttatcacc agacaggtgt gcgcccgctg gtcttctact ccatcgtgtt
      421 gccggagatt cgcgccatca tcttgcaaag tgaaggcttt tgccaggata tcgttcaggc
      481 gctggttgcc ccgctacaac aagagatgaa actggatcca acgccgattg ctcatcgtac
      541 ccatggcctt aaccctaata atctcaataa atatgatgcg cgcattgcgg cgattgatta
      601 cacccttgcc cacgatgacg gcatttcgtt gcgcaatctg gatcaggctc aggtgatcct
      661 gctcggtgtt tctcgctgtg gtaaaacccc caccagtctg tatctggcaa tgcaatttgg
      721 tatccgcacg gcaaactacc cctttattgc cgacgatatg gataatctgg tgctacccgc
      781 gtcgctcaaa ccgcttcagc ataaattgtt cggcctgact atcgacccgg aacgtctggc
      841 ggcgattcgc gaggaacgtc gggagaacag tcgctatgcc tcgcttcgtc agtgcagaat
      901 ggaagtcgcg gaagtggaag ccttgtaccg taaaaatcag atcccgtgga ttaacagtac
      961 caattattcg gtagaagaga ttgccaccaa gatcctcgat atcatgggcc ttagtcgccg
     1021 aatgtactag agaactagtg cgctggtttg ttttttgtta tcatgctaac cacccggcga
     1081 ggtgtgacac acctcgcact tgaaatcagc tgcgattggt ttatcgtgat gcgcatcact
     1141 tcccggtagt cctgccgtag aagcaacaaa tttctgagac ttgtaatgaa cagaactgac
     1201 gaactccgta ctgcgcgtat tgagagcctg gtaacgcccg ccgaactcgc gctacggtat
     1261 cccgtaacgc ctggcgtcgc cacccatgtc accgactccc gccgcagaat tgaaaaaata
     1321 ctgaatggtg aagataagcg actgttggtc attattggcc cctgctcgat ccacgatctc
     1381 accgctgcaa tggagtacgc cacccgtctg cagtcgctgc gcaaccagta ccagtcacgg
     1441 ctggaaatcg taatgcgcac ctattttgaa aaaccacgaa ctgttgtcgg ctggaaaggg
     1501 ctaatctccg atccggattt aaacggcagc tatcgggtaa atcacggtct ggagctggcg
     1561 cgcaaattac ttttacaggt aaatgagctg ggtgtcccta ccgcgactga gtttctcgat
     1621 atggtgaccg gtcagtttat tgctgattta atcagttggg gcgcgattgg cgctcgtact
     1681 accgaaagtc agatccaccg cgaaatggct tcagcactct cctgtccggt aggttttaaa
     1741 aatggtaccg atggcaacac gcggattgcc gtggatgcta tccgcgcagc ccgcgccagc
     1801 catatgttcc tctcgccaga caaaaatggt cagatgacca tctatcagac cagcggcaac
     1861 ccgtatggcc acattattat gcgtggcggc aaaaaaccga attatcatgc cgatgatatc
     1921 gccgcagcct gcgatacgct gcacgagttt gatttacctg aacatctggt ggtggatttc
     1981 agccacggta actgccagaa gcagcaccgt cgccagttag aagtttgtga ggatatttgt
     2041 cagcaaatcc gcaatggctc tacggcgatt gctggaatta tggcggaaag tttcctgcgc
     2101 gaaggaacgc aaaaaatcgt cggcggtcag ccgctcactt acggtcaatc cattaccgac
     2161 ccgtgtctgg gctgggaaga taccgaacgc ctggtcgaaa aactcgcctc tgcggtagat
     2221 acccgcttct gaatgcgtgc ccattcctga tgggatgggc atttctgcgc aacttgttgt
     2281 cttctcaaca cattactgct tgctctggcc tgccataata ttgataataa gaatcattgt
     2341 tatatcaatt attattaatt tttatgcgtt atacggatag cagaaaactc acgcctgaaa
     2401 cggatgccaa tcacaagacc gcttccccgc agcccatccg gcgaattacc agccagacac
     2461 tgttaggtcc ggatggcaaa ctgattatcg atcatgacgg gcaagaatat ctgctccgta
     2521 aaactcaggc tggcaagctg ctgttaacta agtagccttt aactcgagca gctgacttcc
     2581 agccgtttac cccagtcagg tggacgactg acatagtcat catctctgtc gctgaaagga
     2641 tttcgcaacg cctcatgcag gcggtgcaat tccatcatat cacccttttc tgccgcttca
     2701 atcgcccgtt gcgccaacca gttgcgcaat accagagctg ggttaacgct ttgtatcagt
     2761 tgctgacgct cactatcgct aacctcgtct tgttgcaaac gcccccgata acgggcaaac
     2821 cagtcatcaa atgccgcacg atcaataaac tcatcacgta gcggtgacgc cgcgctgtgc
     2881 tgctcggtca gactcagcat gcggaatgtg cgggtataat cgctgcgctc tcgcgccatc
     2941 agactgaata attcattcag tagcgcgtta tcctcttttt gctccgtcat gaagcccagt
     3001 ttctgccgca tccgttgtcc ataatgcgtc aacaaaacct gctgatagct gtccagggcc
     3061 tcattcaggg catctacggc aacaaatggt gacaatgtct gcgccagacg ctgtaaattc
     3121 cacaacgcga cagcaggttg attatcaaag ctataacgcc cttgatgatc cgagtgatta
     3181 caaataaaac cgggttcgta atcatcaaga aaaccaaacg gcccgtaatc aagcgtcagt
     3241 cccagcagcg acatgttgtc ggtattcatc accccatgtg caaagccgac cgtctgccat
     3301 tgggcaatta acgacgcggt acgtgcgaca acatcgctaa accagagacg gtatttgtcc
     3361 tcatcatctt caagatgtga ccagtaatga cgaatagcaa agtcagctaa ctgacgaacc
     3421 ttttccgact cgcggcggta gtaaaaatgt tcgaaatgac caaagcgcag atgacttggt
     3481 gccacacgca tcagcatcgc gcctggctcc gccgtttccc gatacactgg cgaatcgctg
     3541 gtgacgatac ttaacgcgcg ggtcgtcgga atgcccagat aatgcatcgc ctcactggcg
     3601 agactttctc gtatcgtcga acgtaaaacc gcccgtccat cacccattcg cgaataaggc
     3661 gtcaggccag cacctttcag atgccagtcc attgtagtgc catcagcaag cagttgttcg
     3721 ccgagtaaaa tgccgcgccc atcacccagt tggcccgccc agacgccgaa ctgatgacca
     3781 ctgtaaacct gcgccagtgg tgacatacca ggcagtaggg cttcgccgcc ccagacacct
     3841 gcgccatttt taaacagcga cgatggaata ctcagcgtgt tagccagttc gatattatgc
     3901 caaatcagcc gggcattatt taaaggcgta ggggaaagtg ctgtataggt ttctggcaat
     3961 tcatcgcgcc agcgggtaac aaaagacagg gtcatagatc ctcctgtttg atagtgtaga
     4021 cggttactct cgtcttaaac accagcaaac agaagggtta tcgctgaacc aacgtcgtta
     4081 tctgatttat gggaacggca ggccacaggc atccctggag agcatggaaa tcgaaggggg
     4141 taatctgtgc caatatttct gccgtatcaa tgcctcccgc aatgatgcaa ttgcaacaag
     4201 gggaaatttg cgcctggatc gcacgaataa acggttcgaa ggagcggtgc gtgatttgtt
     4261 gctgaataaa acttttatcc agcatgacgc gggtgaaaag accatcaaaa accgctttca
     4321 ttgtgctatt gcctgctccc aaattaccta acacaagggg atacacttgc gataaggata
     4381 aaagaccgcg attatctttt ccttcattga gatgcgggta attctcatta atcaacagtt
     4441 caataaacgg atattttaat agttcgcctg cgtaattatc cctctctaat aataatgtag
     4501 ccacttgtgg cgttaaatta agccaggcaa agagtttatg ttgaataaaa aaatgttggc
     4561 atgattttag taattccaac tgctctgaaa ataattgcca atgttgctcc tcggtaagtt
     4621 gcgctataac ccgactcgtc gggatacgca ccgtgccatc ttcactggag aaatgggtaa
     4681 ttaactcaac gccgacaagg acttgctggt tatctcttat cggcaggaaa tagcaatcag
     4741 aatgataaag attctccaaa aaaatcttca tggtaaccgt ccctctcgaa ggatgttttt
     4801 cagtatccgg ctaaaaggga tgaggccata agacataaca attacagaag gagtaacttt
     4861 catttgttcc atgttaacca ctttttcagg ggtctttttt tagattatcc tgattataaa
     4921 cgaataatcc atttacggaa tttttgtctg caaaatacta ctgtattcag gagtaaatgg
     4981 acggcgatgt atcatcgccg tccatttttc gacatactag attcgtctcg cctgccagaa
     5041 atttttctgc caatagacat tatcaagtga ggaacgcatc actcccttgc tggtagaggc
     5101 gtggataaat tggttgttgg tatcgtaaat acctacatgc aaaccatttt gtccggaccc
     5161 cgttttgaaa aagaccaggt cacctggcag caacttgtct ttatcaattt gcgtgccaat
     5221 agaggcttgt tgtttggttt cacggggcag ctgcaaatcg aaacgatcgc gcatcgtcac
     5281 aaccacaaat cccgaacagt ccacaccgcg ccgcgtcatg ccaccataac gatacggcgt
     5341 gccatgccag ctttgtagct ggtcgttcaa accggcaata acggtaatcg aatcagaaag
     5401 tctggcattt ggcggcggtg ctttatggtg gctacacccg gccagaaaca gtgctgtgat
     5461 caaaataagg cagaaacgca ttccgtacgg ttcctctgtt ttttattctt gcattaattt
     5521 agcgtcgtaa ttacccgatt ttcaagatac taatgaaatc agatggtcaa aatcagcatt
     5581 ctgtgacctt cgatatccag acggcgaaaa ttcatcccat aggcctgcgc cagatttggc
     5641 ggcgtgagca cctcttctct gcgtccactg gccagcattt ttccaccttt tagcaaccac
     5701 gcccgatgcg catgacgcaa cgtgtggttg agatcgtgac tgctcatcac aatcgccagt
     5761 ccttgctgac acagcgcgct cagaattttg tctaacgcac tttgttgcgc aacatcaaga
     5821 ctgttcatcg gctcatcaag aagcagcaat tggcctgcgg gattggcttg tggtgtgatt
     5881 tgcaacacca ccgcagcaag acctacgcgt tgccattcac cgccggaaag ttgattggtg
     5941 ctacgaccga gtttgtcatc aagagccagc gcccctgcga catcattcag tagttcggta
     6001 cgcgttttat cgtgctgatg cagtgtcagg tagtgccaga ccggcattgc aaacggcggc
     6061 gtctgctgtt gtgaaagata ggcgcgatgc agcgcgagtt ttgttgcgga ccatgcttcc
     6121 aggggttgcc ccgcgaactg aatgcttccc ttaccgctgg tcattccggc cattcgtgca
     6181 agcaaggtac tcttacccgc gccattcggc cccaccaggt gcaggatctc cccagcccga
     6241 acctcgccag aaagtggccc taggcgggta gattccgcaa catcctgtaa ctgcatcaca
     6301 atagacatta ttttgccaac gccagtttaa tgctttccat cacaatgggg tcttccggcg
     6361 tcatatccgg ggaaaaacgc tggatgacca atccgtccct gccaactaaa aatttctcaa
     6421 aattccataa aatatcatca gggtacagcg gtgcacgacc tttgctgacc atacgggcat
     6481 agaatccgct ctcttccggc gcgactgcgg tcggcgctgc ggcaatcaat ttttgataca
     6541 gcggatggcg tccttcgccg ttaacttcaa tcttactgaa catcgggaac gtcacccccc
     6601 atgtggtggt acagtaagtt ttaatctctt catcgctgcc cggttcttgt tccagaaact
     6661 ggttgcacgg gaatcccagc accacaaaac ctcgatcggc ccaggctttc tgaatattct
     6721 ccaactgctc atattgcggc gttaagccac actttgaggc gacattgaca atcaacagca
     6781 cattaccggc gtacttctcc agcgtggtca cttcaccgtc gatatctttc actacggtcg
     6841 tcagaatgga atcttgcatc gtttctcctg ggtgtggtca gtaaaaatct tagcttttaa
     6901 tcatagaccg tctttttgcg gctaacgtct tgcttttaac aataaccaga taaacaccgg
     6961 cgcacccaac gttgcggtga ccacgccaat aagcagctct gcggcagcta atgccaggcg
     7021 cgctacaata tcggccagca gcaatgcgct cgcccctgcc agcgcgcagc cgggaagtaa
     7081 tacgcgatga tcggttaaac cacacaaccg aagaatatgt gggatcacca gaccaataaa
     7141 gccgatagca cccgccagcg ccacactgac gccaaccatc cagccggtcg cggccaccag
     7201 cacattgcgc cagaaccaca ggggtaaacc cagttgccgc gccgagatct cgccaagtgc
     7261 taacatattc atcggcctgg actgacaaca gatccacaac aacacgggga tcaatgccag
     7321 catcagccag ctttgccgcc agtctacgcc gccaaaaccg cccatcatcc agtacatcag
     7381 ctgacgtaaa tcaacagagg tggaaaagta gatagcccac gtcattagtg cgctacagat
     7441 aatccctaat gcaacgccag ccagcaataa ccgactggtc gaaagatgac gacgggcgaa
     7501 acgtaagagt attaaagtaa tgataagcgc gccagcaatc gcacacagcc ctagcgccca
     7561 gttggggagt tgcccttgcc caagcaatac cgcggcgata agccccacgc ctgcgccgtt
     7621 agagacgcca agtagtccag gttctgccag aggattttca aacaacgcct gcattacagc
     7681 gccggatata gccagcgccg caccaaccaa caatacagcc agcgtacgtg gcaggcgaat
     7741 ttgccagacg aacagttcgc cacgaggagt aaaccagtca cctagcgaga tccattgttc
     7801 accggcgcaa aggcttaaaa gaagcgccag cagcatcaaa actgacaggc ataataacca
     7861 gcgaatattt tgtcgctgtt gttggcgggc aagtgtcagc atggtatccg ttctgctgaa
     7921 gtgtcatggc gttgatttta cggtgactct tcgacagtga aaagaaaaaa ggccgcagag
     7981 cggccataaa cacaagtaaa aatcaacaag ttagataatt atcaaagact tacagacaca
     8041 caaaaacaca gccaaccaca acaaataaca gggatgtggt cactttgtgg atcatatcgc
     8101 cgccataaat ttacttaata acagtaacca cagccacaag cacggccatc gcagacagga
     8161 caatacctgt gagtaaccaa gtctgatttg caaatgattt ctgaagttca gtacgatgct
     8221 cagccatctc aactttcaga gactggcgta aatcagccat ctcagacttc agggattggc
     8281 gcgattctgc catctcaagc ctcaaccctt cgcgaatctc cagtacatca gatttggtag
     8341 caaaggattc gcttcttgtg gtgagagtaa tcaggttgtt tttgatttca gtcacatcac
     8401 tttccaggca actgacccgc cgttcaaggt cgtcattcat gccatcacct ccatcattac
     8461 cacttcctgt tacttggttg ttggatacat tataggcatt ctctttcttt tttctgaacc
     8521 gcgaaatatg tgcaacattc tctgccatca cttctcatca ccctgcttgc ctacccagtt
     8581 cataaaggcc cgggccgagt aacgatgaac aaacccacat ctgttacagg taagtcggaa
     8641 ttcatagtta tggatatttt cccgatcatg tccctcatat cccggatacc cagtaaatgg
     8701 accgatgtaa tcaagcataa caaaagtgcc taaatcacac tcctcagcag ttttcg
//
LOCUS       DAJVUK010000164         8734 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.164, whole genome shotgun sequence.
ACCESSION   DAJVUK010000164 DAJVUK010000000
VERSION     DAJVUK010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8734
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.164"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            244..1155
                     /gene="ttdA"
                     /locus_tag="OQQ57_003597"
     CDS             244..1155
                     /gene="ttdA"
                     /locus_tag="OQQ57_003597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HCS1958210.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            1152..1757
                     /gene="ttdB"
                     /locus_tag="OQQ57_003598"
     CDS             1152..1757
                     /gene="ttdB"
                     /locus_tag="OQQ57_003598"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HCS1958211.1"
                     /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
                     RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK
                     GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRGKEF
                     GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
     gene            1806..3269
                     /gene="ttdT"
                     /locus_tag="OQQ57_003599"
     CDS             1806..3269
                     /gene="ttdT"
                     /locus_tag="OQQ57_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HCS1958212.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVFGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
                     KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY
                     FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(3312..4325)
                     /gene="tsaD"
                     /locus_tag="OQQ57_003600"
     CDS             complement(3312..4325)
                     /gene="tsaD"
                     /locus_tag="OQQ57_003600"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HCS1958213.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            4562..4777
                     /gene="rpsU"
                     /locus_tag="OQQ57_003601"
     CDS             4562..4777
                     /gene="rpsU"
                     /locus_tag="OQQ57_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HCS1958214.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            4888..6633
                     /gene="dnaG"
                     /locus_tag="OQQ57_003602"
     CDS             4888..6633
                     /gene="dnaG"
                     /locus_tag="OQQ57_003602"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCS1958215.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            6828..8669
                     /gene="rpoD"
                     /locus_tag="OQQ57_003603"
     CDS             6828..8669
                     /gene="rpoD"
                     /locus_tag="OQQ57_003603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HCS1958216.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
BASE COUNT         2109 a         2330 c         2334 g         1961 t
ORIGIN      
        1 cctgcaagtc tttggctaaa ggccagctat tcagcatcgt taattatccg cagttgtgat
       61 aagcgcagtg tatttcgcaa aacattgcca ttccctgctc tggcgcaata ttcattctta
      121 ttttcgcgtt gattcacgaa ctgttaatta catattcacg gtggcaaaaa atataaaacc
      181 acatttttag tggtagttta tggcggtgaa tttttccaga caaatacaaa aactggagtt
      241 gccatgatga gcgaaagtaa taagcaacag gcagtgaata agttgacaga gattgtcgct
      301 aactttaccg ccatgatttc tacccgaatg cctgatgacg tggtggataa actaaaacag
      361 ctaaaggatg ccgaaacgtc gtcgatgggg aaaattatct accatacgat gttcgacaac
      421 atgcaaaaag cgattgacct gaatcgtcct gcctgtcagg acaccgggga gattatgttc
      481 ttcgttaaag tcggttcccg cttcccactg cttggcgagc tgcaaagcat actcaaacaa
      541 gccgtggaag aggcaaccgt caaagcgcca ctacgtcaca atgcggtaga aatttttgac
      601 gaagtaaaca ccggcaaaaa taccggtagc ggcgtaccgt gggtcacctg ggacatcatc
      661 cccgacaatg acgatgcgga aatcgaagtt tacatggcag gtggcggctg cacgctacct
      721 ggccgctcga aagtgttaat gccgtcagaa ggctacgaag gcgtggtgaa attcgtcttc
      781 gaaaatatct ccaccctcgc cgtaaacgcc tgtccaccgg tactggtggg cgtgggcatc
      841 gccacctcgg tggaaaccgc cgccgtactc tcgcgtaaag ccattttgcg cccgattggc
      901 agccgccatc ccaatccaaa agcggcagaa ctggagctac gcctggaaga aggactcaac
      961 cgtctgggga ttggtccaca agggctgact ggcaacagtt cagtgatggg cgtacatatc
     1021 gaatctgccg cccgccatcc gtcaaccatc ggcgttgctg tctctaccgg ctgctgggcg
     1081 catcgtcgcg gcacactgct ggttcatgcc gatctcacct ttgaaaatct gtctcacacc
     1141 cggagcgcgt tatgaaaaag atcctgacaa ccccgatcaa agctgaagat ctgcaagata
     1201 ttcgcgtcgg cgatgtgatc tacctgaccg gtacgctggt gacctgccgt gacgtttgtc
     1261 accgccgctt gatcgaactg aaacgtccga tcccttacga tctcaacggc aaagcgattt
     1321 tccacgctgg ccccatcgtg cgcaaaaacg gcgataaatg ggagatggtt tccgttggcc
     1381 cgacaaccag tatgcgtatg gaaagttttg aacgtgaatt tatcgagcag accggcgtga
     1441 aactggtggt tggcaaaggc ggaatggggc cgctgaccga agaaggctgc cagaaattca
     1501 aggcgctaca tgtgattttc ccggcaggct gcgcggtgct ggcggcaacc caggtggaag
     1561 agattgaaga agtgcactgg acagagctcg gaatgccgga gtcgctgtgg gtctgccggg
     1621 gcaaagagtt cggcccgctg attgtctcta ttgataccca cggcaacaat ctgatagccg
     1681 aaaacaaaaa gctgttcgcc gaacgccgcg atcccatcgt ggaagagatc tgcgagcacg
     1741 tccattacat caaataaccc tcccggagag gctcgccccc tctccttttt cgcaggcata
     1801 acacgatgaa accttccact gaatggtggc gataccttgc gccgctggcg gtcatcgcca
     1861 ttattgctct aattccggtt cccgcagggc tggagagtca tacctggctc tactttgccg
     1921 tttttactgg cgtgatcgtt ggactgatcc tcgaacccgt gccgggtgcc gtggtggcga
     1981 tggtgggtat ctccatcatc gccatactct ctccctggct gctgttcagc cccgaacagc
     2041 tcgcccagcc aggctttaag ttcaccgcca aatccctctc ctgggcagtt tttggttttt
     2101 ctaattcggt tatctggctc attttcgccg cctttatgtt tggcacaggc tatgaaaaaa
     2161 ccgggcttgg acgccgcatt gcgctgattc tggtgaaaaa gatgggacat cgcacgctgt
     2221 ttctcggcta tgcggtgatg ttctccgagc tgatcctcgc acctgtaaca ccgtccaact
     2281 cggcgcgtgg tgcggggatt atctatccca tcatccgtaa cctgccaccg ctctatcaat
     2341 cacaaccaaa cgacagcagt tcgcgcagca ttggctcgta catcatgtgg atggggattg
     2401 ttgccgactg cgtgaccagc gccattttct tgacggcgat ggcaccaaac ttgctgttaa
     2461 ttggactgat gaaaagcgca tctcacgcca cgctgagttg gggcgactgg ttcctcggga
     2521 tgttgccgct cagtattttg ctggtgctgc tggttccctg gctggcttat gtgctgtacc
     2581 cgccggtact gaagtctggc gatcaggtgc cgcgctgggc agagacggaa ctgcaggcaa
     2641 tgggcccgct ctgttcgcgt gaaaaacgga tgctggggct gatggtaggc gcgctggtgc
     2701 tgtggatttt cggcggtgat tatatcgatg ccgcgatggt cggttacagc gtggtggcac
     2761 tgatgctgct tctgcgcatt atcagttggg acgacattgt cagtaataaa gcggcgtgga
     2821 acgttttctt ctggctggcc tcgcttatca ccctcgctac cggactcaac aacactggtt
     2881 ttattagctg gtttggcaaa ctgttagcag gcagcttaag cggttattcg ccaacgatgg
     2941 tgatggtggc gttgattgtg gtgttttatc tgctgcgcta ctttttcgcc agcgccacgg
     3001 cgtatacctc cgccctcgca ccgatgatga ttgccgctgc gctggcgatg ccggaaatcc
     3061 cgctgccggt gttctgccta atggttggcg cggcaattgg tctggggagc attcttacac
     3121 catacgccac cggacccagt ccgatttact acggtagtgg ttatctgcca acggcggatt
     3181 actggcgact gggggcgatt tttgggctga tattcctcgt gttgctggtg attaccggct
     3241 tactgtggat gcccgtggtg ttgctttaag tgaggacggt gccggaaatt gctctccggc
     3301 acccaatagt tttacgcagc cggtaactcc gccagcggcc agcgcggacg cacgctaacg
     3361 ccgagatccg ccgtcgcgcc tgctttaaac cgcaccattc cggcataggc gatcatcgcg
     3421 ccgttatcag tacaaaactc cggacgcgcg tagaacactt cgccgcggcg ttttttcatc
     3481 atttccgcca gcttcgcccg taacgtgcgg ttagcactca cgccgcccgc catgaccagt
     3541 cgcttaaagc ccgtctgatc caacgctcgc ttacacttaa tcatcaacgt atcgaccacc
     3601 gcatcttcaa aggcgcgggc gatatcagca cgcgtctggt cgtcggtgcc gttgtcacga
     3661 atcgtgttcg ccgcaaaggt tttcagacca gaaaagctga aatccagccc cggacggtcg
     3721 gtcatcggac gcgggaaaac aaagcgcccg gcagtaccct gagccgccat tttcgacagt
     3781 aacggtccgc caggataatc cagccccagc agcttcgcgg ttttatcaaa cgcttcaccg
     3841 gcggcatcat cgatagactc gccgagcagc tcgtactgac caatgccagt cacgctgatt
     3901 aactgcgtat gaccgccgga caccagcagc gcgacaaacg gaaattccgg cgggttatct
     3961 tccagcatcg gcgctaacag atgcccttcc atatggtgta ccgggattgc cggaacgttc
     4021 caggcaaacg ccagagaacg ccccacggtt gcgccaacca gcagtgcgcc gactaatcca
     4081 gggcctgcgg tataggccac agcatcaatg tcttttgccg ttaagccaga ctcctttagc
     4141 gccgcctgga tcaacggtac ggttttgcgc acgtgatcgc gggaggccag ttcaggcacg
     4201 acgccgccgt agtcagcgtg caatttcacc tgactataca attggttggc taacaaacct
     4261 ttttcatcgt cgtaaatggc gatgccggtt tcatcgcagg aagtttcaat acccagtaca
     4321 cgcatgactt gttttacctc gctttattac cgcgcagtgt aggaccaatg cgggttgatg
     4381 taaaactttg ttcgcccctg gagaaagcct cgtgtatact cctcaccctt ataaaagtcc
     4441 ctttcaaaaa ggccgcggtg ctttacaaag cagcagcaat tgcagtaaaa ttccgcacca
     4501 ttttgaaata agctggcgtt gatgccagcg gcaaaccgaa ttaatcaaag gtgagaggca
     4561 catgccggta attaaagtac gtgaaaacga gccgttcgac gtagctctgc gtcgcttcaa
     4621 gcgttcctgc gaaaaagcag gtgttctggc ggaagttcgt cgtcgtgagt tctatgaaaa
     4681 accgactacc gaacgtaagc gcgctaaagc ttctgcagtg aaacgtcacg cgaagaaact
     4741 ggctcgcgaa aacgcacgcc gcactcgtct gtactaattc cccgagagcg ttgctctccg
     4801 atcagaccga gttgtagttg taaggccgtg cttccgaaag gaatgcgcgg cttattttcg
     4861 tttatgaatt gctaaaaatc ggggcctatg gctggacgaa tcccacgcgt attcattaat
     4921 gatctactgg cacgcactga catcgtcgat ctgatcgatg cccgtgtgaa gctgaaaaag
     4981 cagggcaaga atttccacgc gtgttgtcca ttccacaacg agaaaacccc gtcattcacc
     5041 gttaacggtg agaaacagtt ttaccactgc tttggatgtg gcgcgcacgg caacgcgatc
     5101 gacttcctga tgaactacga caagcttgag ttcgtcgaaa cggtcgaaga gctggcagca
     5161 atgcacaatc ttgaagtgcc atttgaagca ggcagcggcc ccagccagat cgagcgccat
     5221 cagaggcaaa cgctttatca gttgatggac ggtctgaata cgttttacca acaatcttta
     5281 caacaacctg ttgccacgtc tgcgcgccag tatctggaaa aacgcggatt aagccacgag
     5341 gttatcgctc gctttgcgat tggttttgcg ccccccggct gggacaacgt cctgaagcgg
     5401 tttggcggca atccagaaaa tcgccagtca ttgattgatg cggggatgtt ggtcactaac
     5461 gatcagggac gcagttacga tcgtttccgc gagcgggtga tgttccccat tcgcgataaa
     5521 cgcggtcggg tgattggttt tggcgggcgc gtgctgggca acgatacccc caaatacctg
     5581 aactcgccgg aaacagacat tttccataaa ggccgccagc tttacggtct ttatgaagcg
     5641 cagcaggata acgctgaacc caatcgtctg cttgtggtcg aaggctatat ggacgtggtg
     5701 gcgctggcgc aatacggcat taattacgcc gttgcgtcgt taggtacgtc aaccaccgcc
     5761 gatcacatac aactgttgtt ccgcgcgacc aacaatgtca tttgctgtta tgacggcgac
     5821 cgtgcaggcc gtgatgccgc atggcgagcg ctggaaacgg cgctgcctta catgacagac
     5881 ggccgtcagc tacgctttat gtttttgccg gatggcgaag accctgacac gctggtacga
     5941 aaagaaggta aagaagcgtt tgaagcgcgg atggagcagg cgatgccact ctccgcattt
     6001 ctgtttaaca gcctgatgcc gcaagttgat ctgagtaccc ctgacgggcg cgcacgtttg
     6061 agtacgctgg cactgccatt gatatcgcaa gtgccgggcg aaacgctgcg aatatatctt
     6121 cgtcaggaat taggcaacaa attaggcata cttgatgaca gccagcttga acgattaatg
     6181 ccaaaagcgg cagagagcgg cgtttctcgc cctgttccgc agctaaaacg cacgaccatg
     6241 cgtatactta tagggttgct ggtgcaaaat ccagaattag cgacgttggt cccgccgctt
     6301 gagaatctgg atgaaaataa gctccctgga cttggcttat tcagagaact ggtcaacact
     6361 tgtctctccc agccaggtct gaccaccggg caacttttag agcactatcg tggtacaaat
     6421 aatgctgcca cccttgaaaa actgtcgatg tgggacgata tagcagataa gaatattgct
     6481 gagcaaacct tcaccgactc actcaaccat atgtttgatt cgctgcttga actgcgccag
     6541 gaagagttaa tcgctcgtga gcgcacgcat ggtttaagca acgaagaacg cctggagctc
     6601 tggacattaa accaggagct ggcgaaaaag tgatttaacg gcttaagtgc cgaagagcga
     6661 tcgggaagcc cccgacagcc gcactgagag gcagcggcaa atatataagt acgccctcgt
     6721 aattatcgtt ggcggtaaac aaccgttgga tttcagcgtt aacggctgaa ggacatcggg
     6781 tcaatcgccc aacaccaacc tcatgaaata agtgtggata ccgtcttatg gagcaaaacc
     6841 cgcagtcaca gctgaaactt cttgtcaccc gtggtaagga gcaaggctat ctgacctatg
     6901 ccgaggtcaa tgaccatctg ccggaagata tcgtcgattc agatcagatc gaagacatca
     6961 tccaaatgat caacgacatg ggcattcagg tgatggaaga agcaccggat gccgatgatc
     7021 tgatgctggc tgaaaacacc gcggacgaag atgctgccga agccgccgcg caggtgcttt
     7081 ccagcgtgga atctgaaatc gggcgcacga ctgacccggt acgcatgtac atgcgtgaaa
     7141 tgggcaccgt tgaactgttg acccgcgaag gcgaaattga catcgctaag cgtattgaag
     7201 acgggatcaa ccaggttcaa tgctccgttg ctgaatatcc ggaagcgatc acctatctgc
     7261 tggaacagta cgatcgtgtt gaagcagaag aagcgcgtct gtccgatctg atcaccggct
     7321 ttgttgaccc gaacgcagaa gaagatctgg cacctaccgc cactcacgtc ggttctgagc
     7381 tttcccagga agatctggac gatgacgaag atgaagacga agaagatggc gatgacgaca
     7441 gcgccgatga tgacaacagc atcgacccgg aactggctcg cgaaaaattt gcggaactac
     7501 gcgctcagta cgttgtaacg cgtgacacca tcaaagcgaa aggtcgcagt cacgctgccg
     7561 ctcaggaaga gatcctgaaa ctgtctgaag tattcaaaca gttccgcctg gtgccgaagc
     7621 agtttgacta cctggtcaac agcatgcgcg tcatgatgga ccgcgttcgt acgcaagaac
     7681 gtctgatcat gaagctctgc gttgagcagt gcaaaatgcc gaagaaaaac ttcattaccc
     7741 tgtttaccgg caacgaaacc agcgatacct ggttcaacgc ggcaattgcg atgaacaagc
     7801 cgtggtcgga aaaactgcac gatgtctctg aagaagtgca tcgcgccctg cagaaactgc
     7861 agcagattga agaagaaacc ggcctgacca tcgagcaggt taaagatatc aaccgtcgta
     7921 tgtccatcgg tgaagcgaaa gcccgccgtg cgaagaaaga gatggttgaa gcgaacttac
     7981 gtctggttat ttctatcgcc aagaaataca ccaaccgtgg cttgcagttc cttgacctga
     8041 ttcaggaagg caacatcggt ctgatgaaag cggttgataa attcgaatac cgccgtggtt
     8101 acaagttctc cacctacgca acctggtgga tccgtcaggc gatcacccgt tctatcgcgg
     8161 atcaggcgcg caccatccgt attccggtgc atatgattga gactatcaac aaactcaacc
     8221 gtatttctcg ccagatgctg caagagatgg gccgtgaacc gacgccggaa gaactggctg
     8281 aacgtatgct gatgccggaa gacaagatcc gcaaagtgct gaagatcgcc aaagagccaa
     8341 tctccatgga aacgccgatc ggtgatgatg aagattcgca tctgggggat ttcatcgagg
     8401 ataccaccct cgagctgccg ctggattctg cgaccaccga aagcctgcgt gcggcaacgc
     8461 acgacgtgct ggctggcctg accgcgcgtg aagcgaaagt tctgcgtatg cgtttcggta
     8521 tcgatatgaa caccgaccac acgctggaag aagtgggtaa acagttcgac gttacccgcg
     8581 aacgtatccg tcagatcgaa gcgaaggcgc tgcgcaaact gcgtcacccg agccgttctg
     8641 aagtgttgcg tagcttcctg gacgattaat cggtaggccg gatcaggcgt tacgccgcac
     8701 ccggcactag tccctctgca caaacgccac cttt
//
LOCUS       DAJVUK010000165         8732 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.165, whole genome shotgun sequence.
ACCESSION   DAJVUK010000165 DAJVUK010000000
VERSION     DAJVUK010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8732
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.165"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..891
                     /locus_tag="OQQ57_003604"
     CDS             <1..891
                     /locus_tag="OQQ57_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707596.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCS1958217.1"
                     /translation="ALQTNGILLNNEWCSFLKEHEFLVGISIDGPQELHDRYRRSNSG
                     NGTFAKVIAAIERLKSYQVEFNTLTVINNVNVHYPLEVYHFLKSIGSKHMQFIELLET
                     GTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIFMQWVKNDVGEIFIRQFESFVSRF
                     LGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYPQYKIGNINKSELKTMNSVQLTAQ
                     KKRISAKCQQCAYKPICNGGCPKHRITKVNNETVSYFCEGYKILFSTMVPYMNAMVEL
                     AKNRVPLYHIMDVAKQMENN"
     gene            complement(857..979)
                     /locus_tag="OQQ57_003605"
     CDS             complement(857..979)
                     /locus_tag="OQQ57_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958218.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
     gene            1194..2879
                     /locus_tag="OQQ57_003606"
     CDS             1194..2879
                     /locus_tag="OQQ57_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HCS1958219.1"
                     /translation="MITIPITFCMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG
                     VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIR
                     WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
                     SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP
                     LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELRDNFHTIKENWHRLMNRQR
                     LLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDE
                     LAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVSP
                     GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDIFSPADSWYVSQTPLIKTGLLKEIICK
                     ALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWI
                     FLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL"
     gene            2917..5289
                     /locus_tag="OQQ57_003607"
     CDS             2917..5289
                     /locus_tag="OQQ57_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HCS1958220.1"
                     /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN
                     GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
                     QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
                     RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYFSPD
                     FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVVGRAQYKNVIDTALS
                     KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
                     TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
                     KFAVGDVSHQPYSGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
                     YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
                     YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIGKNVIARAN
                     YVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHIRQVDINPQ
                     IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT
                     HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW
                     TPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
     gene            5346..8129
                     /locus_tag="OQQ57_003608"
     CDS             5346..8129
                     /locus_tag="OQQ57_003608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCS1958221.1"
                     /translation="MRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGLRYMI
                     YPHAQPKDQVNLWLQIHTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETFESMG
                     LRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVI
                     TEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQP
                     NNMTFIVVGDIDSKKALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDKENRV
                     NGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVK
                     IAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAV
                     DQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQ
                     DAFWEQMVNNELAAKKALSPAAILALEKEYANKKLAAYIFPGRNLSLTVDADPQAEIS
                     SKETLAENLTSLTLSNGARVILAKSAGEEQKLQITAVSNKGDLSFPAQQKSLIALANK
                     AVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRIT
                     HSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIVQFTA
                     ADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYLGSIKHSDSPLAAGKPLTRAT
                     DNASVTVKEQNEPVAQVSQWKRYDSRTPVNLATRMALDAFNVALAKDLRVNIREQASG
                     AYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQ
                     QNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLS
                     HPVNTYTGVLLPK"
     gene            8491..>8732
                     /locus_tag="OQQ57_003609"
     CDS             8491..>8732
                     /locus_tag="OQQ57_003609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HCS1958222.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT         2567 a         1896 c         1904 g         2365 t
ORIGIN      
        1 gcattacaaa cgaatggcat tttattgaat aatgaatggt gttcctttct caaagaacat
       61 gaatttctgg ttggtatctc gatcgatggc ccccaggagt tacatgaccg ttacagacgc
      121 agtaattcag gtaacggtac ttttgcaaaa gtgatagcag ccatcgagcg tctgaaatca
      181 tatcaagttg agtttaatac gttaaccgtc attaataacg ttaatgtcca ttaccctctt
      241 gaggtttatc attttttaaa atctatcggc agtaaacata tgcaatttat cgaattgctc
      301 gaaaccggga cgccgaatat tgatttcagt ggtcatagtg agaacacatt ccgtatcatt
      361 gatttttctg tgcctcccac ggcttatggc aagtttatgt caaccatttt tatgcaatgg
      421 gttaaaaacg atgtgggtga aattttcatt cgtcagtttg aaagctttgt cagccgtttt
      481 ttggggaatg ggcatacaag ttgtattttc caggagtcct gcaaggataa tctggttgtt
      541 gaaagtaatg gagacattta cgaatgcgac cattttgtct atccacagta caaaattgga
      601 aacattaata aatctgaact caaaacgatg aacagtgtac aactgacagc gcaaaaaaaa
      661 cggatttcag cgaaatgtca gcaatgtgca tataaaccta tctgcaatgg cggttgtcct
      721 aagcatcgta ttactaaagt aaacaatgag actgtttctt atttttgcga aggttataaa
      781 atcctttttt caaccatggt accttatatg aacgccatgg ttgagttagc taagaacaga
      841 gtaccgcttt accacattat ggatgttgca aaacaaatgg agaataatta ataacgctct
      901 cttttaactc cattcttagc ctccttctta tgaccttaac aaggcacccg acataaattc
      961 ctgtcgggtg tttcgtcatc atcatcttcc cttgcgaaaa tcctggctta cgtggtatgc
     1021 gtcagggcat tagcaatacc cttgattatc aatagcataa ccataaccat aaccataacc
     1081 actgaaaatt aaaaatttct atatatttca tattgttaaa tgatacttaa ataaatttca
     1141 tcagtaaatc attgccatag ataatcattg gatggcacaa tcaattttcg ctaatgataa
     1201 ccattcccat tacgttttgt atgttgatag caaagtatct ctgtctgctg aagccctttt
     1261 ggctgcgtaa gaataataaa acttcagtgt tgttaatcat tattatcctc gcaatgatcc
     1321 ttggcgtggt taaaattcag gtctggttaa acgactggaa taatgatttt ttcaatgcgc
     1381 taagccagaa agaaaccgat aagctttggc agcttgttct ttggttccct gccctgctgg
     1441 ggatctttgt attaatatcc gtaaacaaaa catggttaat taaactactg actattcgct
     1501 ggcgcgaatg gttaacagat tactacctta atcgctggtt tgcagataaa aactactact
     1561 tcacgcagat ctacggcgag cataaaaata cagataaccc tgaccaacgt atcgctgaag
     1621 acattctctt actgatcagc aaaacgctca gtctttcatt tggcttcatc cagtcactta
     1681 gcatgctgat cacctttacc gttattcttt ggcaaagcgc gggtacgctc tcattcactg
     1741 ttggtggaac agaatggaat atccaggggt atatggtcta taccgtcgtg ctcattgtga
     1801 tcggtggaac tttatttacc cataaggttg gtaagcgtat tcgtccgctt aatgtggaaa
     1861 aacaacgtag cgaagcgaca tttcgaacta atcttgtgca gcataataag caggcagaac
     1921 tgattgcgct aagcaatgct gagtctctac aacgccagga gttgcgcgac aattttcata
     1981 ccattaaaga gaactggcat cgtttaatga atcgtcagcg gttgcttgat tactggcaaa
     2041 atatttattc gcgctcgctt agcgttcttc cctactttct gttattgccg cagtttatta
     2101 gcgggcagat caatctgggc ggactgatga aatcgcgcca ggcatttatg ctagtatcga
     2161 acaatttaag ctggtttatt tataaatatg acgaacttgc tgaactggct gcggttatcg
     2221 atcgcttgta tgagttccat caactcactg aacagcgccc tacgaataag cctaaaaatt
     2281 gccaacatgc ggtacaagtg gctaatgcga gtattcgtac gcctgataat aagatcatat
     2341 tagagaactt gaactttcat gtttcgccag gcaaatggct attactgaaa ggctactctg
     2401 gtgcgggaaa aaccacactg cttaaaacat tatcccactg ctggccgtgg tttaaaggtg
     2461 atattttttc tcctgctgac agttggtatg tgtcacaaac accgttaatc aaaaccggct
     2521 tactgaaaga gattatttgt aaagcacttc ccctgcccgt agacgataaa tcgttgagcg
     2581 aagtactgca tcaggttggt cttgggaaat tggctgcgcg tattcatgac cacgatcgct
     2641 ggggagatat tctttccagc ggcgaaaaac aacgtatcgc cctggcacga ttaattttac
     2701 gacgtccgaa atggatattt cttgacgaaa ctacctctca tcttgaggaa caagaggcta
     2761 tccgcttact gcgtttagtg cgtgaaaaac tacccacaag cggcgtcatt atggttacac
     2821 atcaacccgg tgtctggaac ctggccgatg atatttgtga cattagcgcg gttttataaa
     2881 aacaataaaa gccctgctgt acggagatat aaataaatga agcgagttct tattcctggc
     2941 gtcattttat gtggcgctga tgtggcgcag gccgtcgatg acaaaaacat gtacatgcat
     3001 ttttttgaag agatgacggt ctatgctcct gtccctgtac ccgtaaacgg caacacgcat
     3061 tacaccagtg aaagcatcga gcgtttaccg accgggaatg gcaatatcag cgatctgctg
     3121 agaaccaacc ctgcggtacg catggattca acgcaaagta cctcgttgaa ccagggagat
     3181 attcgccctg agaaaatatc tattcacggt gcgtcgccct accagaatgc ctatttgatt
     3241 gacggtatta gtgcaactaa taacctgaac ccagcgaatg agtccgatgc cagtagtgca
     3301 accaatatta gcgggatgtc acaggggtat tatcttgatg tcagcttact ggacaatgtg
     3361 acgctttatg acagttttgt gccggttgaa tttggtcgct tcaatggcgg ggtaattgat
     3421 gcaaagatca aacgcttcaa cgctgatgat agcaaggtga aattgggtta tcgcactacg
     3481 cgttcggact ggttaacatc gcatatcgat gagaataaca agagcgcatt taatcaaggt
     3541 tcttcaggaa gtacttattt ctctccagat tttaaaaaga acttttatac cttgtcgttt
     3601 aatcaggagc tggctgataa ctttggcgtt accgccggtt tatcgcgccg ccagtctgat
     3661 atcacccgcg cggattatgt ttcgaatgac ggcattgtcg tcggtcgggc acagtataaa
     3721 aacgttatcg atactgcatt gagcaaattt acctggtttg ccagcgaccg ctttacccac
     3781 gatttaacct taaaatatac cggctccagc cgtgattata ataccagcac cttcccgcag
     3841 tctgatcgcg aaatgggtaa taaatcctat ggtcttgcat gggatatgga tacgcaactc
     3901 gcatgggcca aactacgtac caccgttggt tgggatcata ttagtgatta tacccgtcac
     3961 gatcatgaca tctggtacac cgaactttca tgtacatatg gtgatattac agggcgttgt
     4021 acccgtggcg gattaggaca catttcccag gctgtagata attacacctt caaaacacgc
     4081 ctggactggc aaaaattcgc cgtgggtgat gtttcgcatc aaccctactc cggcgcggaa
     4141 tacatctatt ccgatgcatg gactgaacgc cataaccagt ctgaatccta tgtgattaat
     4201 gctgcaggaa agaaaactaa ccataccatt taccataaag gtaaaggcag cctaggaatt
     4261 gacaactaca cgctgtatat ggcggatcac attagctggc ggaatgtgtc gttaatgccc
     4321 ggtgtgcgtt atgactatga caactatctg tcaaaccaca atatctcccc gcgctttatg
     4381 acggaatggg atatttttgc tgatcaaacc tcaatgatta ccgccggtta taaccgttac
     4441 tatggcggga atattcttga tatgggatta cgtgatatcc gcaatagctg gacggaatcg
     4501 gtatcaggta ataaaaccct gacgcgttat cagaatttga aaacgcctta taacgatgaa
     4561 ctggcaatgg gattgcagca aaaaatcggt aagaacgtta ttgcacgcgc aaactatgtt
     4621 taccgtgaag cgcatgatca aatcagcaaa agcagtcgta ccgacagcgc gactaaaacc
     4681 accattactg aatataacaa cgatggcaaa accaaaacgc attcgtttaa cctcagtttt
     4741 gaactggccg aacccctgca tatccgccag gtagatatta acccgcaaat tgtctttagc
     4801 tatatcaaga gcaagggcaa cttgtcgtta aacaatggtt atgaggagag caataccggt
     4861 gataaccagg tggtttataa cggtaatctg gtctcttacg atagcgttcc agtggcagat
     4921 tttaataacc cattaaagat ctccttaaac atggatttca cgcatcaacc gagcgggtta
     4981 gtgtgggcga atacgctggc gtggcaagaa gcgcgtaaag ctcgcattat ccttggtaag
     5041 acaaatgcgc aatacatcag cgaatattca gattacaagc agtatgttga cgaaaaactg
     5101 gatagcagcc tgacctggga cacccgcttg tcctggacgc cacaatttct gaaacaacaa
     5161 aacctgacga tcagtgccga tattctcaat gtactggata gcaaaaccgc tgttgataca
     5221 acgaataccg gtgtggcgac ctacgccagt ggccgtactt tctggcttga tgtcagcatg
     5281 aaattttaat agttcggatt ttacttaacc gggtaaattc gcccggtttt cgcatggaga
     5341 taattatgag aaacctctgt ttcttactga cgttagtggc aactctgttg ctccccgggc
     5401 ggctgattgc cgccgcctta ccgcaggatg aaaagttaat taccgggcaa ctggacaatg
     5461 gcttgcgata tatgatttat ccgcatgctc aaccaaagga tcaggtaaat ttatggctgc
     5521 aaattcatac cggttcattg caggaagaag acaatgagcg cggcgtggct cattttgtag
     5581 aacatatgat gtttaacggc acaaaaacat ggccgggtaa taaagtcatc gaaacatttg
     5641 agtcaatggg cctgcgtttt ggtcgcgatg ttaatgccta taccagctat gacgaaacgg
     5701 tgtatcaggt gagtttgccg actacgcaga aacaaaatct gcaacaagtg atggcaatct
     5761 tcagtgaatg gagtaatgcc gcaacctttg aaaaactcga agtagacgct gaacgtggcg
     5821 taattactga ggaatggcgt gcccatcagg atgcgaaatg gcgcacctct caggcgcgcc
     5881 gccctttcct gctggctaat acccgtaatt tagaccgtga acctatcggc ctgatggata
     5941 ctgtcgccac ggtcacaccg gcacaattgc gccaatttta tcaacgctgg tatcaaccaa
     6001 ataatatgac ctttatcgtg gtcggcgata tcgacagtaa aaaagcgctg gcgctgataa
     6061 aggataattt aagtaagctt ccggctaaca aagcagctga aaatcgcgtc tggccgacaa
     6121 aagccgaaaa ccacctgcgc tttaatatca ttaatgataa agaaaaccgg gtgaacggca
     6181 tcgcactcta ttatcgcctg ccaatggtac aagtgaacga tgagcaaagc tttatcgaac
     6241 aagctgaatg gagcatgtta gttcagctgt tcaatcaacg tctgcaggaa cgcatacagt
     6301 cgggcgagtt gaagactatt tctggcggca ctgcgcgcag cgttaaaatt gcacccgatt
     6361 atcagtcgct gtttttccgt gtaaatgcac gagacgataa tatgcaggat gctgcgaatg
     6421 cattaatggc agagttggca accattgatc agcatggttt ttctgctgaa gaactcgatg
     6481 atgtcaaatc tacccgcctc acctggctga aaaatgcggt tgatcagcaa gctgaacgtg
     6541 atttacgtat gctgaccagt cgcctggcat ccagctcatt aaataatacg ccgttcttgt
     6601 cgccggaaga gacatatcaa ctttcgaaac gtctgtggca gcaaattacc gtgcaaagtc
     6661 tggcggaaaa atggcagcag ttaagaaaga accaggacgc attttgggag caaatggtaa
     6721 acaatgagct tgccgccaaa aaagcattgt ctcctgcggc tatcctggcg ctggaaaaag
     6781 agtacgccaa caaaaagctg gcggcttaca tcttcccagg cagaaattta tcgttaacag
     6841 tagacgctga cccacaggcg gaaattagca gcaaagaaac gctggctgag aatctgacat
     6901 cattaacact ttccaatggt gccagggtta ttctggcaaa atccgcgggt gaagagcaaa
     6961 agctacaaat tactgccgta tcgaataaag gcgatttaag tttccctgcg cagcaaaaat
     7021 cacttatcgc gctggcaaat aaagcagtaa gcggaagcgg cgttggtgag ctctcctctt
     7081 ccagcctgaa acgctggagt gcggaaaatt cggtaaccat gagcagtaaa gtcagtggca
     7141 tgaatacgtt gctctccgtt agcgcgcgga ctaataaccc tgaacctggt tttcagttga
     7201 ttaaccagcg aatcacccac agcacgatta acgacaatat ttgggcatcg ctacaaaatg
     7261 ctcaaattca ggcgttgaaa acgctcgacc agcgtccagc ggagaaattc gcccagcaga
     7321 tgtatgagac gcgctatgct gatgaccgca cgaaattact gcaagaaaat cagattgtac
     7381 agtttactgc cgcagatgcg ctggctgccg atcgccagtt gttttcatct ccagcggata
     7441 tcacgtttgt cattgtcggt aatgtctcag aagacaaact cgtggcgtta attacgcgtt
     7501 acttaggatc aatcaaacac tctgattcgc cattagccgc aggtaaacca ttaactcgcg
     7561 cgacggacaa cgcatcggtt actgtaaaag aacaaaatga acctgtggca caggtttcac
     7621 agtggaagcg ttatgattcc cggacacctg ttaatctggc gacgcgtatg gcgctcgatg
     7681 cttttaacgt cgcactggca aaagatctac gtgttaatat tcgtgaacag gcatctggag
     7741 catacagcgt ttcttctcgc ctctcggttg atcctcaggc caaagatatc agtcatttgc
     7801 tggcttttac ttgtcaacca gaacgacatg atgaactgtt aacgttagcg aatgaagtga
     7861 tggttaagcg tctggctaaa gggatcagtg agcaagaact gaatgaatac cagcaaaacg
     7921 ttcagcgcag cctcgatatc caacagcgta gcgttcaaca attagcgaac actattgtaa
     7981 atagtcttat tcaatatgac gatcctgcag catggactga gcaggagcaa ttgttgaaac
     8041 aaatgacggt agagaatgtt aacactgccg ttaaacaata tctttctcat ccggtaaata
     8101 cttataccgg agtattattg ccaaaataat aacagccccg tcaacacatc gttggcgggg
     8161 attttagcaa tattcgctat ttttatgtaa taattttata aatgcgttca aaataataat
     8221 caagtactaa tagtgatatt ttaaggtctg atttttacgt gataattcag gagacacaga
     8281 atgcgcataa aaataacagc ataaaacacc ttaccaccac ccaagaattt catattgtat
     8341 tgtttttcaa tgaaaaaaca ttattcgcgt aatatctcac gataaataac attaggattt
     8401 tgttatttaa acacgagtcc tttgcacttg cttactttat cgataaatcc tactttttta
     8461 atgcgatcca atcattttaa ggagtttaaa atggataaga agcaagtaac ggatttaagg
     8521 tcggaactac tcgattcacg ttttggtgcg aagtctattt ccactatcgc agaatcaaaa
     8581 cgttttccgc tgcacgaaat gcgcgacgat gtcgcattcc agattatcaa tgacgaatta
     8641 tatcttgatg gcaacgctcg tcagaacctg gccactttct gccagacctg ggacgacgaa
     8701 aatgtccaca aattgatgga tttatccatt aa
//
LOCUS       DAJVUK010000166         8718 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.166, whole genome shotgun sequence.
ACCESSION   DAJVUK010000166 DAJVUK010000000
VERSION     DAJVUK010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8718
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.166"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            127..192
                     /gene="yobI"
                     /locus_tag="OQQ57_003610"
     CDS             127..192
                     /gene="yobI"
                     /locus_tag="OQQ57_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response small protein YobI"
                     /protein_id="HCS1958223.1"
                     /translation="MYIFITHFFTEYVIFKYLLPI"
     gene            331..942
                     /gene="ruvA"
                     /locus_tag="OQQ57_003611"
     CDS             331..942
                     /gene="ruvA"
                     /locus_tag="OQQ57_003611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HCS1958224.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
     gene            951..1961
                     /gene="ruvB"
                     /locus_tag="OQQ57_003612"
     CDS             951..1961
                     /gene="ruvB"
                     /locus_tag="OQQ57_003612"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HCS1958225.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(2011..2796)
                     /gene="znuB"
                     /locus_tag="OQQ57_003613"
     CDS             complement(2011..2796)
                     /gene="znuB"
                     /locus_tag="OQQ57_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HCS1958226.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLALDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFIISMMKKQAS"
     gene            complement(2793..3548)
                     /gene="znuC"
                     /locus_tag="OQQ57_003614"
     CDS             complement(2793..3548)
                     /gene="znuC"
                     /locus_tag="OQQ57_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HCS1958227.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
     gene            3627..4559
                     /gene="znuA"
                     /locus_tag="OQQ57_003615"
     CDS             3627..4559
                     /gene="znuA"
                     /locus_tag="OQQ57_003615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HCS1958228.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLLGAKQV
                     TIAQLEDVKLLLMKSIHGDDDDHDHAEKSEEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            4575..5897
                     /gene="mepM"
                     /locus_tag="OQQ57_003616"
     CDS             4575..5897
                     /gene="mepM"
                     /locus_tag="OQQ57_003616"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HCS1958229.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            6017..6988
                     /gene="lpxM"
                     /locus_tag="OQQ57_003617"
                     /gene_synonym="msbB"
     CDS             6017..6988
                     /gene="lpxM"
                     /locus_tag="OQQ57_003617"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HCS1958230.1"
                     /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMVGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLQIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRRPGEIQPYKRKDLYPIK"
     gene            complement(7077..>8718)
                     /locus_tag="OQQ57_003618"
     CDS             complement(7077..>8718)
                     /locus_tag="OQQ57_003618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HCS1958231.1"
                     /translation="IDGLPHVDFSRVDKFFTYADAFRESLPIISGELYFEAHQGCFTS
                     ESATKAHNRNMENKLHDAEFFTTITNNMTSILRSEFDEIWKEMLTLQFHDILPGSCIS
                     RVYLETEKEYIKLEAKTEKIISDTQSTLLSKIDTSSYKDPHILFNTTCFARNEWININ
                     NNWLKARVNSYGYAVIDPKNKIVNGLKAESRSIENNYIKLLFSENGDLISLYDKRYGK
                     EYITENMHSEIRAYHEDAGFFAAWDFASNYRDGESYVLLAEKMTTVISGPKTTMTLIY
                     HYNSSYLRFAFTLTQDSPRVDVQTFIDWHEPNVSLKVKFPVSVQTSLAQCQIQFGVID
                     RPTHSDDSFAFAKDEIPAHHWVDLSDRETGIALIAKNKYGYRVKDQTLELTLLRSQHK
                     PGEIVKTDNYDNFLINNFADIGKQKFIFSLFPHHGDYRVGGVINQAYIMNHPLQVVPV
                     KPHPGELPPSLSFFAIDTNSVIIETIKLAEDGDGIIVRLYESHGLEISAMLSWVCNYH
                     YVQYVDLQENKLDDSFYCNQYCNLEFKPFEIITLRLTQ"
BASE COUNT         2375 a         2008 c         2127 g         2208 t
ORIGIN      
        1 atacatgtaa agacgatatc tccaatttca tattcagcag ggtaattaat attcacgttg
       61 tcattccatt gaaatagata cgaatatacg taatagcata aaaaaattat tttttcagga
      121 ggtgcaatgt atatttttat tacgcatttc ttcactgaat acgtaatatt taaatatttg
      181 cttccaatat aacctgtaga ataaatcata ctgcgccatt tttcagttca tcgagacacc
      241 tcgcaagttt tcttcatcct tcgctggata tctatccagc atttttttat catacagcat
      301 tatctttgat tcattacgca ggagcgtcat gtgataggca gactcagagg catcatcatt
      361 gaaaaacaac ccccgctggt gttaattgaa gtgggcggcg taggctatga agtgcatatg
      421 ccgatgacct gtttttatga actccctgaa gcgggtcagg aagcgatcgt tttcacccac
      481 tttgtggtgc gtgaagacgc gcaactgctg tacggtttta acaataaaca agagcgcaca
      541 ttgttcaaag agttgatcaa aaccaacggc gtcggcccga agttggcgct ggcgatcctc
      601 tccggaatgt cagcgcagca gttcgttaat gccgttgaac gtgaagaagt gggggcactg
      661 gtgaaactgc cgggtattgg caaaaaaacc gccgaacgct tgattgttga aatgaaagac
      721 cgatttaaag gtttgcatgg cgatctgttt acccctgccg ccgacctggt actcacatca
      781 cctgccagcc cggcgaccga cgatgctgaa caggaagcgg ttgccgcgct ggtggcgctg
      841 ggctataaac cacaagaagc aagccgcatg gtgagcaaaa tcgctcgccc tgacgccagc
      901 agtgaaacat taattcgcga agccctacgc gccgcgttat gaggtaaagg atgattgaag
      961 cagaccgtct gatttctgcc ggtaccactt tgccggaaga tgtagcagat cgcgccattc
     1021 gccctaaatt actggaagag tatgttggtc agccgcaggt tcgttcacag atggagattt
     1081 tcatcaaagc agcgaaactg cgcggcgatg ccctcgatca tttgttgatt tttggtcctc
     1141 cggggttggg taaaactacg cttgccaaca ttgtcgccaa tgaaatgggc gttaatttac
     1201 gcacgacttc tggtccggtg ctggaaaagg cgggcgatct ggcagcgatg ctcactaacc
     1261 ttgaaccgca tgacgtgctg tttattgatg agatccaccg tttatcgcca gttgttgaag
     1321 aagtgctgta cccggcaatg gaagactacc aactggatat catgattggt gaaggtccgg
     1381 cggcacgctc cattaaaatt gatttgccgc cgtttaccct gattggcgca accacgcgcg
     1441 caggttcgct gacatcaccg ttgcgcgacc gttttggtat tgtgcaacgt ctggagtttt
     1501 atcaggtgcc ggatctgcaa tatatcgtta gtcgcagtgc acgctttatg gggcttgaga
     1561 tgagtgatga cggcgcgctg gaagttgctc gtcgcgctcg cggtacgcca cgtattgcca
     1621 accgtctgct gcgtcgagtg cgtgatttcg ccgaagtgaa gcacgatggc accatctcgg
     1681 cagatatcgc tgctcaggcg ctggacatgt tgaatgtcga tgctgaaggt ttcgattata
     1741 tggaccgcaa attgttgctg gcggtaatcg ataagttctt tggtgggccg gtaggtctgg
     1801 ataacctggc ggcggctatt ggcgaagaac gtgaaaccat tgaggatgtg ctggaacctt
     1861 atttgattca gcaaggcttt ttgcagcgta caccgcgtgg gcgtatggcg acgacgcggg
     1921 cgtggaatca ctttggcata acgccgccag aaatgccgta agtcggattg gtcgctcgcg
     1981 ccgcatccga caaatgtgtt cagcgataga ttagctggct tgctttttca tcatactgat
     2041 aataaataac agtgctgcac atagcaccac cgacggaccc gccggcgtat cgtaaaatgc
     2101 ggaaaaggtt aaaccgcccg ttacggcaac catccccacc aacacagcga cacctgccat
     2161 ctgttccggc gtgcgggcaa agcgacgtgc agtagcagca ggaataatca gcagtgaagt
     2221 aataatcaac gcgccaacaa atttcatcgc tacaccaatc gtcaatgccg tcaccagcat
     2281 caacaacaat ttcacgcgct gtaatttcac accatcaaca aacgccagat ccgggctaat
     2341 cgtcatcgac agcaaattgc gccattgcca gaacaaaata gccaccacga tgaccacgcc
     2401 aatcgcaata gcgatgagat cttctggcgt cactgccagc aaatcaccga acaggtaagc
     2461 catcaaatca acacgaatgt tagacatcag actaacgacc accaggccca gcgacagggc
     2521 actgtgcgcc ataatcccta ataacgtgtc aagcgccagc tgtggacgtt tctccagcca
     2581 taccagaccg cccgccagga gcagcgtaac ggcaattacc gcatagaatg gattcacgtc
     2641 cagcaacaaa ccaaacgcga cgccaagtaa tgaggcatga gccagcgtat caccgaaata
     2701 agacatacga cgccagacta caaacgaacc cagcggaccc gcggcacagg cgagcatgat
     2761 cccggctaac caaccgggaa ataataattc aatcatgagc gatcatttcc ccgacgcaaa
     2821 acaattcgtc cctgtaaatc gtgacgatga ttatgatgat ggcgatagat acccagttgt
     2881 tcagcaccac gaggaccaaa catagaaata aactccggat gtagggaaac aacttccggt
     2941 gtgccggaac aacaaatgtg gtgattcaga cacagcactt catcggtttt tgccattacc
     3001 agatgcagat cgtgagagac cattaaaacg ccacaatcca gttcgcgacg caactggtca
     3061 ataaggtcat ataacgccac ctggccattt acatccacgc cttgagtggg ttcatccagc
     3121 actaataatt gcggtcgatt taacaatgct cgcgctaaca gtacacgctg tgtttcgcca
     3181 ccagagagct tttgcatcgg tgcgttaatc agatgcccgg cctggacacg tttcagtgca
     3241 ggcaaaatat cttctttatg tgtgccaggg cgtaagcgta aaaaacggtt tacggtcagt
     3301 ggcaacgtgg tgtcgagata cagcttctgc ggtacatagc cgatgcgtag ttttccgttg
     3361 cgcttgataa ccccttcatc gggtgttacc agcccgagca ctacccgtac cagtgtcgac
     3421 ttacctgcgc catttggccc aagtaaagtc aaaatttttc caggtttaag ttccagcgac
     3481 acatcagaga ggacgcggcg ttggccaaaa gaaactgaga cattttccag ggaaaccaga
     3541 cttgtcatgt taattttagt cttgcagtag tcatgagatg ttataatatc acacttctca
     3601 tattcattac gatgattggt cgcattatgt tacataaaaa aacgcttctt ttcgcagcat
     3661 tatccgccgc tctctgggga ggtgcaacac aggccgcaga tgccgccgtt gtcgcttcgc
     3721 ttaaacccgt tgggttcatc gcttctgcca ttgctgatgg tgtaacagaa acggaggttt
     3781 tactgcctga cggcgcttca gaacatgatt attcactgcg tccatcggat gtaaaacgct
     3841 tacagaacgc ggacttagtc gtttgggttg gcccggagat ggaagcgttt atgcaaaaac
     3901 cggtaagcaa attactagga gcgaagcagg taacgattgc gcagcttgaa gatgtgaaac
     3961 tgctactgat gaaaagtatt cacggcgatg atgatgatca cgaccacgcg gaaaaaagtg
     4021 aagaagatca ccatcacggc gatttcaaca tgcatctttg gctttcccca gagatagcgc
     4081 gggctacagc ggttgcaatc catggaaaat tagtggaact tatgccgcaa agtcgagcca
     4141 aacttgacgc caacctgaag gattttgagg cacaattagc ctcaaccgaa acgcaggttg
     4201 gtaacgagct cgcgccgctc aaggggaaag gttatttcgt ttttcacgat gcttacggct
     4261 atttcgaaaa acagttcgga ctgacaccgc ttggtcattt taccgttaac cctgagattc
     4321 aacctggcgc gcagcgttta catgaaataa gaacacagtt ggttgagcaa aaagcaacct
     4381 gcgtttttgc tgagccacag ttcaggccag cggtcgttga gagcgtcgca cgagggacat
     4441 ccgttcgtat gggaacgttg gatcccttgg ggacgaatat caaactgggt aaaacaagct
     4501 attcagaatt cctgagtcaa ttagccaacc agtatgcgag ctgcctgaaa ggagattaat
     4561 gaggaagtga ttacgtgcaa cagatagccc gctctgtcgc cctggcgttt aataatttac
     4621 cgcgaccaca ccgcgttatg ttggggtcgc tcaccgttct tactctggcc gtcgctgtct
     4681 ggcggcccta tgtttatcac cgcgatgcca cgccaattgt caaaaccatt gagctggaac
     4741 agaacgaaat tcgttcgctc ttacctgaag ccagtgagcc gattgatcaa gctgcacaag
     4801 aagatgaagc cattccccag gacgaactgg atgacaaaat cgccggtgaa gcgggcgtgc
     4861 atgaatatgt tgtttccact ggcgatacgc taagcagcat tctcaatcag tatggtattg
     4921 atatgggtga tatcacccaa ctggctgcgg ccgacaaaga attgcgtaac ctgaaaatcg
     4981 gtcaacaact ctcctggaca ttaaccgcgg acggcgaact gcagcgcctc acctgggaag
     5041 tgtctcgtcg tgaaacccga acctatgacc gtactgccgc taacggtttt aaaatgacca
     5101 gcgaaatgca gcaaggagag tgggttaaca atctgctgaa aggtaccgtc ggagggagct
     5161 ttgttgccag cgccagaaac gccggtttaa ccagcgccga agtgagcgca gtgattaaag
     5221 ccatgcagtg gcaaatggat ttccgcaaac tgaaaaaagg cgatgaattt gcggtgttaa
     5281 tgtctcgaga gatgcttgat ggtaaacgtg agcaaagcca gctgctgggc gtacgtttgc
     5341 gttcagaagg taaagattat tacgcaatcc gcgctgagga tggcaaattc tacgaccgta
     5401 acggtactgg tctggcgaaa ggattcttgc gattcccgac ggcgaaacag ttccgtatct
     5461 cgtctaactt taacccgcgt cgtactaatc cggtgaccgg tcgcgttgca ccacacagag
     5521 gtgttgattt cgccatgccg cagggtacgc cagtgctttc agtgggtgac ggtgaagtgg
     5581 tggttgccaa acgcagtggc gcagcaggtt attatgtggc tattcgtcat ggtcgcagct
     5641 acaccacgcg ttatatgcac ttgcgcaaga ttctggtgaa accgggacag aaggtgaaac
     5701 gtggcgaccg tatcgcgctt tccggtaata ccggacgttc aaccgggccg catctgcact
     5761 atgaagtatg gataaaccag caggccgtaa acccgctgac ggcaaaactg ccgcgtaccg
     5821 aagggctgac cggctccgat cgtcgcgaat tcctggcgca ggccaaagag attgtgccgc
     5881 agctacggtt tgattaatta acatccattc gcagccggta cgcagtcagt accggctttt
     5941 tttatttggt gcggggcaag ttgcgccgct acactatcac cagattgatt tttgccttat
     6001 ccgaaactgg aaaagcatgg aaacgaaaaa aaataatagc gaatacattc ctgagtttga
     6061 taaatccttt cgccacccgc gctactgggg agcatggctg ggcgtagcag cgatggtggg
     6121 tatcgcttta acgccgccaa agttccgtga tcccattctg gcacggctgg gacgttttgc
     6181 cggacgactg ggaaaaagct cacgccgtcg tgcgttaatc aatctgtcgc tctgctttcc
     6241 agaacgtagt gaagctgaac gcgaagcgat tgttgatgag atgtttgcca ccgcgccgca
     6301 agcgatggca atgatggctg agttggcaat acgcggaccg gagaaaattc agccgcgcgt
     6361 tgactggcaa gggctgcaga tcatcgaaga gatgaggcgt aataacgaga aagttatctt
     6421 tctggtgccg cacggttggg ccgtcgatat tcctgccatg ctgatggcct cgcaagggca
     6481 gaaaatggca gcgatgttcc ataatcaggg caacccggtt tttgattatg tctggaacac
     6541 ggtgcgtcgt cgctttggcg gtcgtctgca tgcgagaaat gacggtatta aaccattcat
     6601 ccagtcggta cgtcaggggt actggggata ttatttaccc gatcaggatc atggcccaga
     6661 gcacagcgaa tttgtggatt tctttgccac ctataaagcg acgttgcccg cgattggtcg
     6721 tttgatgaaa gtgtgccgtg cgcgcgttgt accgctgttt ccgatttatg atggcaagac
     6781 gcatcgtctg acgattcagg tgcgcccacc gatggatgat ctgttagagg cggatgatca
     6841 tacgattgcg cggcggatga atgaagaagt cgagattttt gttggtccgc gaccagaaca
     6901 atacacctgg atactaaaat tgctgaaaac tcgcagaccg ggcgaaatcc aaccgtataa
     6961 gcgtaaagat ctttatccta tcaaataaaa aaaagcctct caaattattg agaggctgta
     7021 ctcgataaaa aatctcaatg agtgttccca ctattttgag tttttaggtt agtacgctat
     7081 tgagttaatc gtagcgtgat aatttcaaaa ggtttgaact caagattgca atattgattg
     7141 caataaaaac tgtcatctaa cttattttct tgaagatcga catattgaac gtagtgataa
     7201 ttacataccc acgaaagcat ggctgaaatt tctaatccat gactctcata taatcttacg
     7261 attataccgt cgccgtcttc agctaatttt attgtttcga tgataacgct gttagtatcg
     7321 atagcaaaaa atgatagtga agggggtaat tcacccgggt gcggtttgac agggacgacc
     7381 tgtaagggat gattcattat ataggcttga ttaataacac cacccacacg gtaatctcca
     7441 tgatgaggaa ataaggagaa tatgaatttt tgtttaccaa tatctgcaaa attattaatc
     7501 aggaaattat cataattgtc tgtcttaaca atttccccag gtttatgctg cgaacgcagc
     7561 aaagttaatt caagcgtctg gtctttgaca cgatagccat atttgttttt tgctattaaa
     7621 gctatgccag tttctcgatc agaaaggtcg acccagtgat gtgctggtat ttcatctttg
     7681 gcaaaagcga acgaatcatc gctatgcgtt ggtctgtcaa ttacaccgaa ctgaatttga
     7741 cattgtgcaa gagatgtttg tactgacacc gggaatttga ctttgagaga aacattaggt
     7801 tcgtgccaat caataaaagt ttggacatca acgcgtggac tgtcctgtgt cagggtaaat
     7861 gcgaagcgaa gataagagga attgtagtga taaatcagcg tcatcgtagt tttaggcccg
     7921 ctgattacag ttgtcatttt ttcagcgagt aaaacatatg attccccatc acgataattt
     7981 gaagcaaaat cccaggccgc gaaaaaacct gcatcttcgt ggtatgcacg gatctcactg
     8041 tgcatatttt cagtaatgta ttctttacca tatcttttat catatagcga aattaaatca
     8101 ccgttttctg aaaaaagaag tttaatgtaa ttattttcaa tacttcgaga ttctgccttc
     8161 agaccattta cgatcttatt ctttggatca atcacagcat aaccataaga gtttactcgt
     8221 gctttgagcc agttgttgtt tatattgatc cattcgttac gagcaaaaca ggtggtatta
     8281 aataaaatgt gcggatcttt ataagaagaa gtatcaattt tacttaataa agtagactgc
     8341 gtatcagaaa taattttctc ggtttttgct tctagtttaa tatattcctt ttcagtttca
     8401 agataaactc ttgaaataca tgatccggga aggatgtcat ggaattgcaa ggtcagcatc
     8461 tctttccata tttcatcaaa ctcactgcga agaattgatg tcatattatt agtaatagtt
     8521 gtaaaaaatt cagcatcatg taatttattt tccatatttc gattatgagc tttagttgct
     8581 gactctgatg taaagcaccc ttgatgagcc tcgaaataaa gttcacctga aataatgggc
     8641 aagctttcgc gaaaagcgtc ggcgtaagtg aagaacttat caacacggct gaaatcaaca
     8701 tgaggtaagc catcaata
//
LOCUS       DAJVUK010000167         8599 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.167, whole genome shotgun sequence.
ACCESSION   DAJVUK010000167 DAJVUK010000000
VERSION     DAJVUK010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8599
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.167"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..184
                     /locus_tag="OQQ57_003619"
     CDS             <1..184
                     /locus_tag="OQQ57_003619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HCS1958232.1"
                     /translation="EAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQ
                     KGEVVGVDDQCKEHKE"
     gene            403..645
                     /locus_tag="OQQ57_003620"
     CDS             403..645
                     /locus_tag="OQQ57_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958233.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(975..1904)
                     /gene="fdhE"
                     /locus_tag="OQQ57_003621"
     CDS             complement(975..1904)
                     /gene="fdhE"
                     /locus_tag="OQQ57_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HCS1958234.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLDDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(1901..2536)
                     /gene="fdoI"
                     /locus_tag="OQQ57_003622"
     CDS             complement(1901..2536)
                     /gene="fdoI"
                     /locus_tag="OQQ57_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HCS1958235.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(2533..3435)
                     /gene="fdoH"
                     /locus_tag="OQQ57_003623"
     CDS             complement(2533..3435)
                     /gene="fdoH"
                     /locus_tag="OQQ57_003623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase O subunit beta"
                     /protein_id="HCS1958236.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(3448..6498)
                     /gene="fdnG"
                     /locus_tag="OQQ57_003624"
     CDS             complement(3448..6498)
                     /gene="fdnG"
                     /locus_tag="OQQ57_003624"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5911..5913),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HCS1958237.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVANYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            6692..7525
                     /gene="fdhD"
                     /locus_tag="OQQ57_003625"
     CDS             6692..7525
                     /gene="fdhD"
                     /locus_tag="OQQ57_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HCS1958238.1"
                     /translation="MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
     gene            7679..>8599
                     /locus_tag="OQQ57_003626"
     CDS             7679..>8599
                     /locus_tag="OQQ57_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HCS1958239.1"
                     /translation="MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAP
                     EAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYVDWLKDFK
                     QGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNT
                     INEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAEL
                     KNIEEREGKIFHYYSLAVMISAKQINNLISQEKFDVDAAMKKVSELETLVAQAKEADK
                     GGMNFSFINSAGQYQLEAKKYVRRIRDKVPY"
BASE COUNT         2049 a         2176 c         2275 g         2099 t
ORIGIN      
        1 agaggcaatt aaacggctga acaagcttcg gggctggcgt aaggtttcac gatctgcaat
       61 tttacgcgaa gcggttgagc aatatctgga gcggcagcaa tttccggtgc gtaaagcaaa
      121 gggaggcagg caaaaggggg aggtagttgg tgttgatgat cagtgtaagg agcataagga
      181 atgaaaaaaa tttttcattc ttgaatataa aaaaacagat gcccttattc tggtattaat
      241 acaaggctgt tttacttgaa cttataataa ctgcaactgt tacatcgtat ctggaaaacg
      301 cctcgcaaaa ataaaaaatg atgcgtaaat gagctttctt taaagattcg gcaagggtac
      361 ttttctctcc atagattcaa aaatgatatt ggcgagatat ttatgaactc tctggcaggt
      421 atagatatgg gcagaatttt actcgattta tcgaatgagg tgattaagca acttgatgat
      481 ctcgaggtgc agcgtaatct tcctcgtgcg gacctattaa gggaagcggt agatcaatac
      541 ctgataaatc aatcgcaaac agcaagaacc agtgttcctg gcatctggca agggtgtgag
      601 gaagatggtg tcgaatatca gcgtaagctg cgcgaggaat ggtaatggga aaaaatgatg
      661 tcaatcagat tgctgacaac gtgcgcgttg ttcatgccgg atgcggcgtg aacgccttat
      721 ccggcctaca aagtcatgca aattcaatat attgaagttt attggtaggc ctgataagcg
      781 cagcgcatca ggcaatcata cgcttgtcat cagtgacata cccataacct tatcgatgtg
      841 ttggagggaa gaacgaggca aacagacaat tgcggcatga tcttgaatgg gtaacgcgga
      901 atacgagaga tggtgtcgtc acaccctatg agctgtaatc cgggcgacca gcgccacccg
      961 gaaaacgtca gagattactc cccttcaccc ggaaacagga acgggttgat ggaactgcgg
     1021 gcatagcctt cttgctccat tcgcgcgtcc agtaccagag aagcgaggtc atctgccacg
     1081 gcttcaactt tcggttcttt ttcctgataa agaatcttca ggtaagtgcc gcagtcatcg
     1141 cagctttcgg ctttaatcgc ggcctgttcg tcatccagcg accagtaatg cagtttgccg
     1201 ctctgttcac agttgctgca ttttacgcgc actacgtgcc attcggtttc acacaggttg
     1261 cagtgcaggt aacgcagacc ctgagtggtg ccaatttgca ccatgctgga caccggcata
     1321 gaaccacaaa ccgggcaata ttgacgttgc tcgccgtatt cagcgcgggc tttgccgggg
     1381 atcagattgg ccatctgcgc ccagtagagc gacagtgcag cccagataaa cggcgcttta
     1441 tcgctgctga cggatgagaa atcagaggca aacagtgcgc tggccatatc ttccagctcc
     1501 tgagtcgatg ccttctccag attctcaatc actgccagcg ccgggccgct catttcaggt
     1561 ttcagctcag caatcagcgc catcagcagc ttttgccagt gcttatcacg cggcagaacg
     1621 tgaatatcca gcgggggctt gccctgtgcg ctggcttctt taatgcgcgc ggtcagatcc
     1681 atctccagcg gatggtcgta cagcaccact tcctgggcgt gggcgataag cgcagcaaag
     1741 cgcaggtaat catccagcgg attattttct gccagctcgc gcagacgctc ggcgcggcgg
     1801 ttgtataaat tcttgagccg agggaacaat aacggcggaa tcatatccgc cgtacgtttc
     1861 tcgctcgaac ccagctcatc ttgcgggatt atgcgaatac tcattcagct ttcttttccg
     1921 ttgtcttgcg gacctcacgg taccagcgcg ggtgatgttt cttcgcccag gcgctggtaa
     1981 cccatccttc caccatggcg gtaatcgtgc ctttcaccca aagggcggcg tagatatgca
     2041 ccatgataac cacaattaac gccactgcgg caaatgaatg cagcattaac gcgaatcgga
     2101 tcaccgggat tgagaaagca ggcgcaaaat aaggacgcca gataatcacg ccgctcacca
     2161 gcagcagaac caggaaaata atcgccgccc agaaaacgca tttctgaccg aagttataac
     2221 gcccggtgtc acctacttcc tcgttgacga cgatcttacg aatattcttc gcccaaaaga
     2281 tatcatcccg attgattagg ttgtgatgcc agtaacggaa aaacatgatg atgaacgagg
     2341 caaacataac cacgccgaca aacgggtgca gaattcgcgc cagctgcggt gtgcccatga
     2401 tttgcatcaa ccagttgaag gacgggaaca aaaagcccag cccgctcacc gccgctagga
     2461 tgaagcagaa ggcggtgatc cagtggttga tacgttccgg cgcggtgtag cgcacgatgg
     2521 tgtcacgtcg tttcatttgc gctcctcgtc tttctcttcg tgcagattat tctcttcctc
     2581 atccgcacgg ttcggaccga cacccacgta gtggaagata ctggctgcga aggtagccgc
     2641 aaagccaaca gctgcgagcg gtttccagat gcctttccag aatttcacgg tttcgctgat
     2701 ttccgggttc tccggcaagc catgatacag atttggcttg tcagcatggt gcagcacgta
     2761 cataacgtgt gtaccaccga cgcctgccgg atcgtacagg cccgcattgt cgtaaccgcg
     2821 ggttttcagc tccgccacgc gctcgctcgc cagcgttttc atcgactctt tcgtaccgaa
     2881 gtgaatcgcg cccgttgggc aggtcttcac gcaggctggt tcttgcccaa ccaccacgcg
     2941 gtcaacgcac agcgtacatt tgtagacgcg gttgtcttcc gggttgaggc gcggaatgtc
     3001 gaacggacag cccgcaatgc aataaccgca gccaatgcac tgctcggact ggaagtcgac
     3061 gataccgttg gcatactgaa taattgcacc ttccgccggg cacgctttca gacagcctgg
     3121 atcggaacag tgcatacagc cgtctttgcg gatcagccat tccagtttgt cgttctgctc
     3181 cacttccgag aagcgcatca ccgtccacga tttggcactt aaatcattgg ggttgtcgta
     3241 caccccaatg ttattgccga cggtatcgcg aatgtcgttc cactctgaac acgccacctg
     3301 acaggcttta cagccgatac aggtggtgac gtcgatgagt ttcgccactt cttcctggaa
     3361 gtcccgcgcc tgaggcgcgg gggtcagacc gttagtcgcg gaacgacgaa tgatatcttg
     3421 agattgataa gccatatgtc gtctccgtta caccttttcc acattcacaa ggaaggactt
     3481 aaactccggc gtctgcgtgt tcgcatcacc aacgaatggc gttaaagtat tggcaataaa
     3541 gcctttttta gctacgcctt catagcccca gtgaatcgga ataccgatgg tatcgatatc
     3601 tttgccgttc gctttcagcg tgcgaatacg tttggtcacc accgctttgg ctttgatata
     3661 gccacggttg gaggagactt tcacggtatc gccctgggca atgccaagtt tattcgccag
     3721 cgactccccg atttccacaa actgctctgg ctgcaaaatc gcgttcaaca gcgcgtgttt
     3781 ggtccagtag tggaagtgct cggtcagacg ataggtggtt ccgacatacg ggaacttatc
     3841 ggctttaccc aatgcttcgg cgtcgtcttt aaagatacgt gcagccgggt tcgagataac
     3901 gtttggatgc agcgggttag ttcccagcgg cgtttcaaac ggctcgtagt gttccgggaa
     3961 cggaccttcc gccatcttat cgagggcaaa cagacgcccc atgccttcct gctgcatgat
     4021 aaacggcccg acgccgctac ccggaggcgc tgcgctgtag tccggaatat cccagccggt
     4081 ccacttagtg ccgtcccatt tcagcaactg acgcttcgga tcccacgggt taccctgcgg
     4141 atctgcggag gcgcggttat acagaatgcg gcggttaagc ggccatgccc atgcccagcc
     4201 cagcgtgtta ccgaggccag acggatcggc gttatcacga cgcgccatct ggttgccttc
     4261 cggcgtccag ctaccggcga aaatccagca gccacaggag gttgtaccgt catcgcgcaa
     4321 ttgggcgaac gagctaagtt gttggccttt cttgacgata accgcaccgg ttgccggatc
     4381 ggtaatatcg gccagcgcct taccgttgct ctccatcgct acttcttccg acttcggctc
     4441 atgcggaatg gcgtagttcc aggtcatgtt cagcacctga tccgggttcg cgccaccctg
     4501 ttcggcatac atcttgcgca agcgcaggaa gataccggag aggatctcac cgtcagtcag
     4561 cgcaatcccc ggggcgtccg cacctttcca gtgccactgc aaccagcgac ctgagttaac
     4621 gattgaaccg ttctcttctg cgaagcaggt cgatggcaga cggaacactt cggtctggat
     4681 cttcgacgag tcaacttcgt tcagctcacc gtggttctgc cagaagttag aggtttcagt
     4741 gttcagcggg tcgatggtga cgaggaactt cagtttcgac agacaaccga tcactttgtt
     4801 tttgttcggg aatgaggcaa cagggttaaa accctggcag atatagccat tgaccttgcc
     4861 ctctttcatc atctcgaagt attgcaggac gtcgtagcct ttatcccact tcggcaacca
     4921 gtcaaagccc cagctatttt ccgccgtcgc tttatcacca aagaaggcct tcatcataga
     4981 gacgaagaat ttcgggtagt tgccccagta gtttacctgg ccttccagca gcggttttgg
     5041 cgtgttggcg gtaaggtagg tttgcagatc ggtctgcttc tcgcttggca gcgtcatgta
     5101 acctggcagg ctctgcgaca gcagccccag gtccgtcagc ccctgaatat tggagtgacc
     5161 gcgcagggcg ttaacgccgc cgcctgccat ccccatattg ccgagcagca gctggatcat
     5221 cgccatcgta cgaatgtttt gcgcaccaac ggagtgttgc gtccagccga gggcatacag
     5281 gaacgaggca gttttatcgt gagcactggt ttctgcgatg tattcgcaga ctttcaggaa
     5341 cgcgtctttt ggcgtaccac agatgttttc aaccacatct ggcgtgtagc gggaaacgtg
     5401 ctgtttcagc aagttccaca cgcagcgcgg atgttgcagc gtggtatcgc gtttggcgaa
     5461 gccgttttcg tccagttcgt aagtccagga ggatttatcg tacttgcgtt tttccgcgtc
     5521 atagccggtg aaaaggccat cttcaaagcc gtaatcctca cgcacgatca ggctggcgtt
     5581 ggtataggct tcggtgtatt cgcggttgaa tttttcattg ttcagcaggt acagcaatac
     5641 gcctgacagg aaagcaatgt cagtaccgga acgaataggg gcatagtagt tagctaccgc
     5701 cgccgtacgc gtaaagcgag gatcgatcac aatcagcttc gcgccgttgt gaattttggc
     5761 ttccatcgcc cagcggaacc cgaccgggtg agcttcagcg gcgttaccgc ccatcaccac
     5821 gacgaggttg gcgttcttga tgtcgaccca gtggttggtc atcgcaccgc gaccaaatgt
     5881 tggagcaaga cttgctaccg ttggtccgtg tcagacacgc gcctggttgt cgaccgcgag
     5941 catacccagc gcgcgggaga atttttgcgt taaatagccg gtttcgttac tcgacgcgga
     6001 agcacacagc atcccggtgg agagccagcg gttaacagtc acgccttcgg cgttttgcgc
     6061 aatgtagtta gcatcgcggt cttctttcat cagtttggcg atgcgatcaa acgcctcttc
     6121 ccaactgatt tgctgccatt tatcagaacc tggcgcacgg tattccggaa acttcagacg
     6181 gctttcggag tggatgaaat ccaccaggcc agcgcctttc ggacaaagtg caccgcggtt
     6241 gaccgggtga tccggatcgc cttcgatatg gaagatagat gctttggcgt tttttgctcc
     6301 gtcaccgagg ctgtacatca acagcccaca gcctacggaa caataggtgc aggtattacg
     6361 ggtttcgcgg gtgcgcagca gtttatactg ccgggtttcc gcgagtgcta cgctgggtgc
     6421 aaaacctagt gccgctgccg tggtgcctgc cataccgcca gcgcagatct taaagaactg
     6481 ccttctgctg acctgcatgg attgctcctt gtttcgacat tgtcacgtcc catttacatt
     6541 cgcttgctgc gtgtgcaggg agtgggagtt atttttcttt gcggaagggg ccgcaaaggt
     6601 ccagaattgg ctcgatttcc ctccatccag gaagggtttg taacagaata ccataatgtt
     6661 ggtgtgtgtg ttcttatctg gttaagagaa agtgaaaaaa acacagcgaa aagaaatcga
     6721 aaatgtgaca aatatcacag gtgttcgtca aattgagtta tggcggcgtg atgatttaca
     6781 acacccacgg ttagatgagg tcgcggaaga agttcccgtt gcgctggtct acaacggcat
     6841 ttcgcatgtg gtgatgatgg cgtcgcccaa agaccttgag tactttgcgc tcggtttttc
     6901 gctttccgag gggattatcg aaagtccgcg cgatatcttc ggcatggatg tcgttccttc
     6961 ctgtaatggt cttgaagtac aaattgagct ttccagccgc cgctttatgg ggttgaagga
     7021 gcgccgccgg gcgctggcgg gacgtacggg ctgtggcgta tgcggcgtgg agcaacttaa
     7081 tgacatcgga aaaccggtgc agccgctacc gttcacccag acgtttgatc tcaacaaact
     7141 ggatgatgca ttacgtcatc tcaacgattt tcagccagtg gggcaactga ctggttgtac
     7201 tcacgccgct gcctggatgt tgccatctgg cgaactggtc ggcgggcatg aagacgtggg
     7261 gcgccatgtg gcgctggaca aactgttagg ccgccggtca caagaagggg aaagctggca
     7321 gcaaggtgcg gtactggttt ccagtcgtgc cagttatgaa atggtgcaaa agtcggcgat
     7381 gtgcggcgta gagattttgt ttgcggtgtc tgccgcgacc acgcttgctg tagaagtggc
     7441 tgagcgctgt aatctgacac tggtaggttt ttgtaaaccg ggtcgggcaa cggtttatac
     7501 ccatccgcag cgtttgagca attaattaaa ataagtcctg cgatatatat taaattgcag
     7561 gacttattca tttcgtgaat tttattattt ttatttataa ataaaacgcg tgtagtggcg
     7621 ttttcttttt tcatttatta tgttcactct cttatctata tatttataag gcaattaaat
     7681 gaaaaggaat ttattatctt ccgctattat agtcgccatc atggccctcg gtctgacggg
     7741 ttgtgatgat aaaaaagccg aaacagaaac gcccccgcct gccaatagtc aacctgccgc
     7801 accagctcct gaagctcccg ttgcaaaagc agaagctaaa cctgaaacac ctgcgcaacc
     7861 ggtggtcgat gaacaagcgg ttttcgacga aaaaatggat gtctatatca agtgctataa
     7921 caagttacag atccctgtac agcgcagtct ggcgcgttat gttgactggc tgaaagattt
     7981 taaacagggg cctaccggtg aagagcgtac tgtttatggc atctacggca ttagtgaatc
     8041 caacctcgct gagtgtgaaa aaggcgtaaa aagtgctgtg gcgttaacgc ctgcgctgca
     8101 accaattgat ggcgtggcgg tgagttatat cgatgctgcc gtggcgttgg gtaataccat
     8161 taacgaaatg gataaatatt acacccagga aaattataaa gacgatgcgt ttgcgaaagg
     8221 gaaaacgctg caccagacat tcttaaaaaa tctggaagcc tttgaacctg tagcagaatc
     8281 ttatcatgcg gcgattcagg aaattaacga taagcgccag cttgcggaac tgaaaaatat
     8341 tgaagaaaga gaagggaaaa tattccacta ctattctctg gcagtcatga tttcagcgaa
     8401 acaaattaat aacctgatat cgcaagagaa gtttgatgtt gatgcggcaa tgaagaaagt
     8461 gtctgaactg gaaacgctgg tggcgcaggc caaagaagcg gataaaggcg gcatgaattt
     8521 ctcgtttatt aattcggcag gccagtatca actcgaggct aaaaaatacg ttcgccgcat
     8581 cagagataaa gtcccgtac
//
LOCUS       DAJVUK010000168         8390 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.168, whole genome shotgun sequence.
ACCESSION   DAJVUK010000168 DAJVUK010000000
VERSION     DAJVUK010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8390
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.168"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..136
                     /gene="csgC"
                     /locus_tag="OQQ57_003627"
     CDS             <1..136
                     /gene="csgC"
                     /locus_tag="OQQ57_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706954.2"
                     /note="involved in autoagglutination of curliated cells;
                     not involved in production of curli fibers; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HCS1958240.1"
                     /translation="NQPIALTKLSLNISPEDRVKIVVTVSDGQALHLSQQWPPSSEKS
                     "
     gene            257..568
                     /locus_tag="OQQ57_003628"
     CDS             257..568
                     /locus_tag="OQQ57_003628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1958241.1"
                     /translation="MFRPFLNSLMLGSLFFPFIAIAGSTAQGGVIHFYGQIVEPACDV
                     STQSSPVEMNCPQNGSVPGKTYSSKALMSGNVKNAQVASVKVQYIDKQKKLAVMNIEY
                     N"
     gene            664..1197
                     /gene="ymdB"
                     /locus_tag="OQQ57_003629"
     CDS             664..1197
                     /gene="ymdB"
                     /locus_tag="OQQ57_003629"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HCS1958242.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            1139..2620
                     /gene="clsC"
                     /locus_tag="OQQ57_003630"
     CDS             1139..2620
                     /gene="clsC"
                     /locus_tag="OQQ57_003630"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsC"
                     /protein_id="HCS1958243.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRQMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(2628..3785)
                     /gene="mdoC"
                     /locus_tag="OQQ57_003631"
     CDS             complement(2628..3785)
                     /gene="mdoC"
                     /locus_tag="OQQ57_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HCS1958244.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMLVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            4179..5714
                     /gene="mdoG"
                     /locus_tag="OQQ57_003632"
     CDS             4179..5714
                     /gene="mdoG"
                     /locus_tag="OQQ57_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HCS1958245.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLRDKVGKLGGAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            5707..8250
                     /gene="mdoH"
                     /locus_tag="OQQ57_003633"
     CDS             5707..8250
                     /gene="mdoH"
                     /locus_tag="OQQ57_003633"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HCS1958246.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKHWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
BASE COUNT         2116 a         1986 c         2193 g         2095 t
ORIGIN      
        1 taatcaacct attgctttga cgaagttgag tttaaatatt tccccggaag atcgggtgaa
       61 aatagttgtt actgtttctg atggacaggc acttcattta tcacaacaat ggccgccctc
      121 ttcagaaaag tcttaatttg ttgaaatgtc gagcataaga tgaatctgga gagaatggtc
      181 tgctgcgaat cagccaacct gaaagtatgg ataacacaac cctcaaggat gactaatcat
      241 tgaggaaata gaataaatgt tcagaccttt tttaaactct cttatgctcg gcagtttgtt
      301 ttttcctttt attgccatcg caggaagcac cgcgcaaggg ggcgtgatcc atttttatgg
      361 ccaaattgtg gaaccggcat gtgacgtcag cacccagtca tcacccgtag aaatgaactg
      421 cccacagaat ggttctgttc cgggaaaaac ctattccagc aaagcgttaa tgagcggcaa
      481 tgtcaaaaac gcgcaagtag cctcagtaaa agtgcagtat attgataaac agaaaaagct
      541 ggctgtaatg aacatcgaat ataactaagt ttctgaacaa cgcacgttgc tgagtagaaa
      601 aatgcgattt aaccaaaaag cctgctgtac acttaagaaa caagaaggtg ttaaggaggc
      661 gttatgaaaa cgcgtattca tgttgtgcag ggtgatatta ccaaactggc cgttgatgtg
      721 attgtgaatg cggctaatcc gtcattaatg ggaggcggcg gcgtcgatgg ggccattcat
      781 cgcgcagcgg gtccggccct gctggatgcc tgtttaaaag tcaggcaaca gcagggcgat
      841 tgccctacgg ggcatgccgt tattacgctt gcaggcgatc ttcccgctaa agccgtagta
      901 cacaccgtcg ggccagtctg gcgtggtggt gaacaaaacg aagaccagct tttgcaggat
      961 gcctatctca atagtctgcg actggtggcg gcaaacagct atacgtcagt ggcatttcct
     1021 gcaatcagta ctggggttta tggttaccct cgtgcggcag cggctgaaat cgcagtaaaa
     1081 accgtttcag aatttattac ccgtcacgct ttacccgaac aggtatactt tgtctgttat
     1141 gatgaagaaa acgcccacct ctacgaaaga ctccttaccc aacaaggaga tgaatgattt
     1201 gccccggctg gcgagcgcgg tgctgccact gtgttcgcaa catcccggtc agtgtggtct
     1261 tttccctctg gagaaaagtc tggatgcgtt tgccgcccgg tatcgtctgg ccgaaatggc
     1321 agagcatacg ctggatgttc agtattacat ctggcaggac gatatgtcgg gtcggttact
     1381 gttttccgcc ctgttagccg cagcaaagcg tggcgttcgc gtccgtttgt tgctggacga
     1441 caacaatacg cccggacttg acgatatttt acgcttgctt gacagccatc cccgcattga
     1501 agtccggctt tttaatcctt tctcgtttcg cttgctgcgt ccgcttggtt atatcaccga
     1561 cttttcccgt ctcaatcgcc gtatgcacaa taaaagtttc actgtcgatg gcgtggttac
     1621 cttggtggga ggacgaaata ttggtgatgc ctattttggg gcaggggaag agccactttt
     1681 ttcggattta gatgttatgg caataggacc cgtggtagag gacgttgccg atgatttcgc
     1741 ccgctactgg tattgcaaat cggtttcacc cttacagcag gtgctggatg tcccggaagg
     1801 tgaaatggcg gatcgcatcg agttacccgc ctcctggcat aacgatgcca tgacgcatcg
     1861 ttacttacgc caaatggaat ccagtccgtt tataaatcat ctggttgatg gaacgttgcc
     1921 gcttatctgg gcgaaaacac gtttattaag tgatgatccg gcgaaagggg agggcaaggc
     1981 aaaacggcat tcactgttac cgcagcgcct gttcgatatc atgggctcac ccagtgaacg
     2041 catcgatatt atctcttcct attttgtacc gacacgcgca ggtgtggcgc aactcttacg
     2101 gatggtgaga aaaggggtaa agattgcgat cctaaccaat tctcttgccg ctaacgatgt
     2161 tgctgtcgtc catgccggat acgcgcgctg gcgcaaaaaa ttgctccgct atggcgtgga
     2221 attatatgaa ctcaagccga cgcgtgaaca aagtagtacg ttacacgatc gcggcataac
     2281 cggtaattcc ggtgccagcc tgcatgctaa aacctttagc atcgatggta aaacggtgtt
     2341 tatcggctct ttcaatttcg atccacgttc gacattgctc aatactgaaa tgggcttcgt
     2401 gatagagagc gaaacgctgg cacagttaat tgataaacgc tttatacaga gccagtatga
     2461 tgcggcctgg cagctccgtc tggacaggtg gggacggatc aactgggttg atcgtcatgc
     2521 aaagaaagag attattctca aaaaagaacc cgccaccagt ttctggaagc gggttatggt
     2581 cagactggcg tcgatattgc ccgtggaatg gttattgtaa atgtggctta acgggctggt
     2641 gctttatcgt tctcacgctt aacaaccggt ttaccagaaa acaaaaactt cagtaacggg
     2701 atgcgtaaat gaatttcata cagaattatc gcaatcccta ctacgaatat caggccacag
     2761 agaaaaccaa gccagttgga ggtgatgtgc ggtgtaatgt atgcgccgaa aaacagcgtt
     2821 aacgggtggt gaaccagata gataaatagc gatgcgttaa caaagtaagt cacccgcgct
     2881 gactggaagt taagcaaacg gtggccaaag gagaagacca cattcaccat ccacagaccg
     2941 aggaccatgg tgatcaccga ctcggtttcg tacatccagg catcgccact gccatagcgt
     3001 tggttgagta aataagcgac aaatgccaat gctgctgcaa gggtacagcc acgagacggc
     3061 gtggtaaaca aggctttaag atgagggaaa atgaaagcca gtgcaccgag gataaagaac
     3121 ggcaaataaa atagcgtttg catgacaata aaattgaaca tgccattact cagaatgggc
     3181 ggatacacaa taaaaatcgt tcttcttatt accgcatagc cgatgccgag gcataaaaaa
     3241 atcaccgata gttttaccat cgagaatttt ttattcgttt tatcagaatt ttctaaatta
     3301 tttctgatgc gtttaaatat ccatacgcac agcgtcgtca tgactactaa caccagtaaa
     3361 aaccacaggt gtgatattaa ttcccaggcc aacgtattat atttgtcata caatgacagc
     3421 ccaggccaac tttccgcttt ccctttgacg tattgcagca taataaattg cggcaatgtc
     3481 agtaagggga tggctgttaa catcgggata cctacacgtt cgacacgtac tttccaccat
     3541 tttttcaagg gatagcgtaa aaaaagcatg taggaaaagt agccggatat aacgaaaaat
     3601 accagcatgc ggaacgagtg gatgaagtca ttaaaaaggg tcagccacaa tgacggttcg
     3661 gcgctattca catgccatgt atggctcgaa tagattaaag aaatatgaaa agggatccct
     3721 aacaacatca gccaggcgcg gatggagtcg aggaaatatt cacgttgcgc gggtactgga
     3781 ttcatatatg gttaactaat ctcggatttt tcgtcttatc cctgtcgggt tatgccttta
     3841 ggcttgttgc catagcgaca ccgacctgac cgcgccaggc gcaggcttca aggtttttat
     3901 gcatagcata atcgctacca ctaaccagaa tggaagcgtc tgtaagacgg ttgataaata
     3961 aaattgctgg caaaccctac acgaagtcga tgcttctgtc tttaggagaa gcacggaaag
     4021 tgaaaacggt tgcaatcagg tgcttaatcc atgagccagc gtgctgaacg ataccgggat
     4081 tctgttgtcg gaatggctgg ttatccatta aaatagatcg gatcgatata agcacacaaa
     4141 gggggaagtg cttactaatt atgaaacata aactacaaat gatgaaaatg cgttggttga
     4201 gtgctgcagt aatgttaacc ctgtatacat cttcaagctg ggctttcagt attgatgatg
     4261 tcgcaaagca agctcaatcc ttagccggga aaggctatga ggcgcccaaa agcaacttgc
     4321 cctccgtttt ccgcgatatg aaatacgcgg actatcagca gatccagttt aatcatgaca
     4381 aagcgtactg gaacaatctg aagaccccat tcaaactcga gttctaccat cagggtatgt
     4441 acttcgatac cccggtcaaa ataaatgaag tgactgccac cgcagtcaaa cgaatcaaat
     4501 acagcccgga ttatttcact ttcggcgatg ttcagcatga caaagacacg gtaaaagacc
     4561 ttggttttgc cggttttaaa gtgctttacc cgatcaacag caaagataaa aacgatgaaa
     4621 tcgtcagcat gctcggggcc agctatttcc gcgtgattgg tgcaggtcag gtttatggcc
     4681 tttctgcccg cggcctggca attgataccg ccttgccatc gggtgaagaa tttccacgct
     4741 tcaaagagtt ctggatcgag cgtccaaaac cgactgataa acgtttaacc atttatgcat
     4801 tgcttgactc gccgcgcgcg acaggtgctt acaaattcgt ggttatgcca gggcgtgaca
     4861 cggttgtgga tgtgcagtcg aaaatctatc tgcgcgataa agtcggcaaa ctggggggtg
     4921 caccgttaac cagtatgttc ctgtttgggc cgaaccaacc gtcgcctgca aataactatc
     4981 gtccggagtt gcacgactct aacggtctct ctatccatgc cggtaatggc gaatggatct
     5041 ggcgtccgtt gaataacccg aaacatttag cggttagcag cttctcgatg gagaacccgc
     5101 aaggcttcgg tctgttgcag cgcggtcgtg atttctcccg ctttgaagat ctcgatgatc
     5161 gttacgatct tcgtccaagc gcatgggtga ctccgaaagg ggagtggggt aaaggcagcg
     5221 ttgagctggt ggaaattcca accaacgatg aaaccaacga taacatcgtc gcttactgga
     5281 cgccggatca gctgccggag ccgggtaaag agatgaactt taaatacacc atcaccttca
     5341 gccgtgatga agacaaactg catgcgccag ataacgcatg ggtgcaacaa acgcgtcgtt
     5401 caacggggga tgtgaagcag tcgaacctga ttcgccagcc tgacggtact atcgcctttg
     5461 tggtcgattt taccggcgca gagatgaaaa aactgccaga ggataccccg gtcacagcgc
     5521 aaaccagcat tggtgataat ggtgagatag ttgaaagcac ggtgcgctat aacccggtta
     5581 ccaaaggctg gcgtctggtg atgcgtgtga aagtgaaaga tgccaagaaa accactgaaa
     5641 tgcgtgctgc gctggtgaat gccgatcaga cgttgagtga aacctggagc taccagttac
     5701 ctgccaatga ataagacaac tgagtacatt gacgcaatgc ccatcgccgc aagcgagaaa
     5761 gcggcattgc cgaagactga tatccgcgcc gtacatcagg cgctggatgc cgaacaccgc
     5821 acctgggcgc gggaggatga ttccccgcaa ggctcggtaa aggcgcgtct ggaacaagcc
     5881 tggccagatt cacttgctga tggacagtta attaaagacg acgaagggcg cgatcagctg
     5941 aaggcgatgc cagaagcaaa acgctcctcg atgtttcccg acccgtggcg taccaacccg
     6001 gtaggccgtt tctgggatcg cctgcgtgga cgcgatgtca cgccgcgcta tctggctcgt
     6061 ttgaccaaag aagagcagga gagcgagcaa aagtggcgta ccgtcggtac catccgccgt
     6121 tacattctgt tgatcctgac gctcgcgcaa actgtcgtcg cgacctggta tatgaagacc
     6181 attcttcctt atcagggttg ggcgctgatt aatcctatgg atatggttgg tcaggatttg
     6241 tgggtttcct ttatgcagct tctgccttat atgctgcaaa ccggtatcct gatcctcttt
     6301 gcggtactgt tctgttgggt gtccgccgga ttctggacgg cgttaatggg cttcctgcaa
     6361 ctgcttattg gtcgcgataa atacagtata tctgcgtcaa cagttggcga tgaaccatta
     6421 aacccggagc atcgcacggc gttgatcatg cctatctgta acgaagacgt gaaccgtgtt
     6481 tttgctggcc tgcgtgcaac gtgggaatca gtaaaagcca ccgggaatgc caaacacttt
     6541 gatgtctaca ttcttagtga cagttataac ccggatatct gcgtcgcaga gcaaaaagcc
     6601 tggatggagc ttatcgctga agtcggtggc gaaggtcaga ttttctatcg ccgccgccgt
     6661 cgccgcgtga agcgtaaaag cggtaatatc gatgacttct gccgtcgctg gggcagccag
     6721 tacagctaca tggtggtgct ggatgctgac tcggtaatga ccggtgattg tttgtgcggg
     6781 ctggtgcgcc tgatggaagc caacccgaac gccgggatca ttcagtcgtc gccgaaagcg
     6841 tccggtatgg atacgctgta tgcgcgctgt cagcagttcg cgacccgcgt gtatgggcca
     6901 ctgtttacag ccggtttgca cttctggcaa cttggcgagt cgcactactg gggacataac
     6961 gcgattatcc gcgtgaaacc gtttatcgag cactgcgcac tggctccgct gccgggcgaa
     7021 ggttcctttg ccggttcaat cctgtcacat gactttgtag aagcggcgtt gatgcgccgt
     7081 gcaggttggg gggtctggat tgcttacgat ctcccgggtt cttatgaaga attaccgcct
     7141 aacttgcttg atgagctaaa acgtgaccgc cgctggtgcc acggtaacct gatgaacttc
     7201 cgtctgttcc tggtgaaggg tatgcacccg gttcaccgtg cggtgttcct gacgggcgtg
     7261 atgtcttatc tctccgctcc gctgtggttt atgttcctcg cgctctctac tgcattgcag
     7321 gtagtacatg cgttgaccga accgcaatac ttcctgcaac cacggcagtt gttcccggtg
     7381 tggccgcagt ggcgtcctga gctggcgatt gcactttttg cttcgactat ggtgctgttg
     7441 ttcctgccga agttattgag cattttgctt atctggtgca aaggaacgaa agaatacggc
     7501 ggcttctggc gcgttacatt atcgttgcta ctggaagtgc ttttttccgt gctgctggct
     7561 ccggtacgca tgctgttcca tacggtcttc gttgtcagcg cgttccttgg ctgggaagtg
     7621 gtgtggaatt caccgcagcg tgatgatgac tccacttcct ggggtgaagc gttcaaacgc
     7681 cacggctcac agctgctgtt agggttagtg tgggctgttg ggatggcgtg gctggatctg
     7741 cgtttcctgt tctggctggc accgattgtc ttctcgttga tcctgtcacc gtttgtttcg
     7801 gtgatttcca gccgtgccac cgttggtctg cgaaccaaac actggaaact gttcctgatc
     7861 ccggaagagt attcaccgcc gcaggtgctg gttgataccg atcgcttcct tgagatgaat
     7921 cgtcaacgct cccttgatga tggttttatg cacgcggtgt ttaacccgtc atttaacgct
     7981 ctggcaaccg caatggcgac cgcgcgtcac cgcgccagta aggtgctgga aatcgcccgt
     8041 gaccgccacg ttgaacaggc gcttaacgag acgccagaga agctgaatcg cgatcgtcgc
     8101 ctggtgctgc taagcgatcc ggtgacgatg gcccgtctgc atttccgtgt ctggaattcc
     8161 ccggagagat attcttcatg ggtgagttat tacgaaggga taaagctcaa tccactggca
     8221 ttgcgtaaac cggatgcggc ttcgcaataa aaacgtagtt gcctgatgcg ctacgcttat
     8281 caggcctaca tcgttcctgc aatttattga ttttgcaaga ttttgtaggt tgggtaaggc
     8341 gttcacgccg catccggcaa aaacaacgag ccaataaaaa taccggcgtt
//
LOCUS       DAJVUK010000169         8316 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.169, whole genome shotgun sequence.
ACCESSION   DAJVUK010000169 DAJVUK010000000
VERSION     DAJVUK010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8316
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.169"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(313..891)
                     /gene="mocA"
                     /locus_tag="OQQ57_003634"
     CDS             complement(313..891)
                     /gene="mocA"
                     /locus_tag="OQQ57_003634"
                     /EC_number="2.7.7.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor cytidylyltransferase"
                     /protein_id="HCS1958247.1"
                     /translation="MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCS
                     RIILVTGYRGNELHERYVNQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDM
                     PTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG
                     AHYSVEVENAEIILDIDTPDDFITVQKRYTKI"
     gene            994..1764
                     /gene="yqeC"
                     /locus_tag="OQQ57_003635"
     CDS             994..1764
                     /gene="yqeC"
                     /locus_tag="OQQ57_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311776.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium-dependent hydroxylase
                     accessory protein YqeC"
                     /protein_id="HCS1958248.1"
                     /translation="MKSIVDPSALFIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA
                     SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT
                     PEAIDALVQRPECDVILIEADGSRAMPLKAPDEHEPCIPKSSCCVIAVMGGHILGAKV
                     STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC
                     ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN"
     gene            1812..3437
                     /locus_tag="OQQ57_003636"
     CDS             1812..3437
                     /locus_tag="OQQ57_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF2563 family selenium-dependent molybdenum
                     hydroxylase system protein"
                     /protein_id="HCS1958249.1"
                     /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI
                     VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM
                     RPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV
                     EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE
                     HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA
                     GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA
                     EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFT
                     AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVK
                     LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV
                     SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA"
     gene            complement(3478..4410)
                     /gene="arcC"
                     /locus_tag="OQQ57_003637"
     CDS             complement(3478..4410)
                     /gene="arcC"
                     /locus_tag="OQQ57_003637"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCS1958250.1"
                     /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV
                     THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNVLREELLSRGI
                     NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV
                     ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA
                     EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA
                     ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ"
     gene            complement(4458..5843)
                     /gene="hyuA"
                     /locus_tag="OQQ57_003638"
     CDS             complement(4458..5843)
                     /gene="hyuA"
                     /locus_tag="OQQ57_003638"
                     /EC_number="3.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311773.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-phenylhydantoinase"
                     /protein_id="HCS1958251.1"
                     /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI
                     DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCR
                     LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKL
                     NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE
                     AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD
                     TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP
                     NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV
                     IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF
                     LRRKPFVPPVL"
     gene            complement(5896..7107)
                     /locus_tag="OQQ57_003639"
     CDS             complement(5896..7107)
                     /locus_tag="OQQ57_003639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgeY family selenium metabolism-linked
                     hydrolase"
                     /protein_id="HCS1958252.1"
                     /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR
                     IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME
                     TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII
                     EQSGIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL
                     GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL
                     DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG
                     LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY
                     AAIPLSWLATE"
     gene            complement(7165..>8316)
                     /gene="dpaL"
                     /locus_tag="OQQ57_003640"
     CDS             complement(7165..>8316)
                     /gene="dpaL"
                     /locus_tag="OQQ57_003640"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HCS1958253.1"
                     /translation="FNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGV
                     KKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFAT
                     TTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLT
                     MQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGV
                     GAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLAC
                     GEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAA
                     VHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP"
BASE COUNT         1962 a         2022 c         2177 g         2155 t
ORIGIN      
        1 cttagcttat acagatatca ttgagtgacc ggtgttgaga aatccggtgg tttaggggga
       61 tagagcaaca atcgcaccac tcttgccagg tttggcggga aatataaaaa aatgtgaggc
      121 ggctcgaaac ttaagggctt tttgtgaatg aactcacagg tgctaaatga gaattaaaat
      181 cactcctgaa aattattatt gccagcccat atatcacttt ttctcttttc tcaaaatcag
      241 tgattcctta tcattatgat aaagagtgct ggagggatta aatatttgaa cgcaatcgtt
      301 taactacgtt ttttaaattt tagtatacct tttttgcact gtaataaagt cgtccggagt
      361 atcaatatct aaaattattt ctgcattttc tacttcgacg gaataatgag ctcccataag
      421 gagtgcctga cgcatattgg tgatattggg gcgcttgatt gcctgcatca ggcatggttt
      481 tgacactaaa atcggatggc cggggatgcc attatggagt ggcagtattg cgccatcatt
      541 tcgtaacgac cagatttttc tgaaaatatc gatggtgagg gttggcatgt caccgtgggt
      601 gagaaaacaa tgttctgttt gcactgcggg tactgcggcc tttactgatg ttagtaaacc
      661 ctgcgcataa tctgggttgt ggataatagt gatattgctc tggttcacat aacgttcgtg
      721 cagttcatta ccacgatagc cggtgactaa aataattcgg ctacaaaact gcaacgcatt
      781 tttgatactt gtatcaagaa ttgtcccctg ttgccagggt aacatcattt tccattgccc
      841 cattcttgat gataatccgg cagcggtaat tatacagtcg atggctgaca tagtggttcc
      901 attatttata ggggctaata acgcctgata attgcgttac ttcctgatgg attaagttgg
      961 ggataattta tcccagagag gtcataaaga ctcgtgaaaa gtatagttga cccatcggca
     1021 ttattcattg atttaggtgc gcagaaacgt cccactgtga tttctgttgt tggtgctggg
     1081 gggaaaacca gcttgctttt ttggctggca gaactgctcc aggctagcgg caggcgtgtg
     1141 ttaatcacga cgacaacaca tatgtttatg ccaacgtctc actggcccgt ggttttctgt
     1201 cgtgatcccg ccatgcttcc tcatgcgtct cttacatccc ccatttcatt ttgttttcac
     1261 agctggaaag cgaaccaggg aaaagtgcag ggatttacgc cagaagcgat tgatgcactg
     1321 gtgcaacgac cagagtgtga cgtaattctc attgaagcag atggctcgcg tgcaatgccg
     1381 ttaaaagcgc ctgatgagca cgaaccttgc atacccaaaa gcagttgctg cgtgattgct
     1441 gtgatgggag gacatatttt gggcgcgaaa gtgagcacag aaaatgtcca tcgctggtcg
     1501 cagtttgctg atattactgg gttaacacct gatgcaacct tgcaactgag cgatctcgtt
     1561 gcgctggttc gccaccctca gggggcgttt aaaaacgtac cgcaaggttg tcggcgagtc
     1621 tggttcatta accgtttttc tcaatgtgag aatgcgattg cacaaagcga gctccttcaa
     1681 ccgctgcaac aacacgacgt agaggcaatc tggctaggcg atatacaaga acatcctgca
     1741 atcgcgcgca gatttgtgaa ttagcggccc gggtattccg ggttactgaa aggatatcca
     1801 ttgaggttgg tatgaatatt ttcacagagg ctgcaaaact cgaagagcaa aattgtccgt
     1861 ttgcgatggc gcaaattgtt gatagccgag gctcgactcc ccgccattct gcacaaatgt
     1921 tagtgcgcgc cgatggttct atcgtcggta caattggtgg cggaatggtt gagcggaagg
     1981 tgattgaaga gtcacttcag gcattgcagg aacgtaagcc gcgattattc catggacgta
     2041 tggctcgtaa cggtgcggat gctgtcgggt cagattgtgg aggtgcaatg tcagtattta
     2101 tcagcgtcca tggtatgcgt ccacgtctgg tgttgattgg cgcggggcat gtcaaccggg
     2161 cgatagccca gagtgccgcg ctattaggat ttgatattgc cgttgccgat atttatcgcg
     2221 aaagcctcaa tcctgaacta ttcccaccat caaccacgct tctccatgct gagtcgtttg
     2281 gtgcggcagt ggaagcactg gatattcgcc ctgataattt tgtcctgatt gccacgaata
     2341 atcaggatcg tgaagccctc gacaaactca ttgaacagcc cattgcatgg ttggggttgc
     2401 tggcaagtcg ccgcaaggtt cagcttttcc tgcgtcaatt gcgtgagaaa ggcgtggctg
     2461 aagaacatat tgcccgttta catgcgcccg ttggttacaa cataggtgcg gaaacgccgc
     2521 aggagatcgc catcagcgtg ctggcagaaa tattacaggt gaaaaataac gcgccgggtg
     2581 ggctgatgat gaaaccttct catccttccg gacaccagct ggtggtgatt cgcggtgcgg
     2641 gagatatcgc cagtggtgtg gcgctacgtc tgtatcatgc gggttttaaa gtgatcatgc
     2701 tggaagtgga aaaaccgaca gtgattcgtt gtaccgtggc gtttgcccag gccgtgttcg
     2761 atggcgaaat gacggtcgaa ggcgtcactg ctcgcctggc aaccagctct gcggaagcga
     2821 tgaaacttac cgaacgcgga ttcatccctg tgatggtaga tcccgcctgt tcattgcttg
     2881 atgaactgaa accgctttgc gtggtggacg ctattctggc gaaacagaat ttgggaacgc
     2941 gggcagatat ggcaccagta acaatcgcgc ttgggccggg ctttactgca gggaaggatt
     3001 gtcatgcggt aattgaaaca aatcgcgggc actggctcgg tcaggtgatt tactctggtt
     3061 gtgcgcagga gaataccggt gttcctggca atattatggg gcataccacc cgacgggtga
     3121 tccgtgctcc tgctgcaggc attatgcgat ccaacgtgaa attaggcgat ctggtgaaag
     3181 agggcgatgt gattgcctgg attggtgagc atgaaattaa agcaccgttg acggggatgg
     3241 tgcgtggctt gttgaacgac ggcctggcag tggttggtgg ttttaaaatt ggtgatatcg
     3301 atcctcgtgg tgaaaccgct gatttcacca gcgtttctga taaagcccgg gcgattggcg
     3361 gcggcgtact tgaggcgtta atgatgttga tgcatcaggg cgtgaaagcg acaaaagaag
     3421 tgctggaagt ggcttaaatg aaaatggccg gatggtatta cccacccggc cttaaaatta
     3481 ctgacaaatc accgttccgg ttttgccttc aatcccttct ttcgctttgc tcaatacggt
     3541 aatcagtgct tcacgacctg cgcgagagcg agcaaacgag gcggcagctt ccactttagg
     3601 cagcatagaa cctttcgcaa aatgaccttc ttcgataaag cgttcagcat cacttaatga
     3661 caggcgatcg agccactgtt cattctcttt accgaagtta atggccactt tttctaccgc
     3721 agtcagaatg atcagcatat cggcatcaat catttctgct aaacgggcgc tggcccagtc
     3781 tttatcgata accgcgctgg caccacgcag atggttacct tcacgaataa cagggatacc
     3841 accaccgcca acggtgatca ccacctggcc tgcatctacc agagctttaa cagtttcttt
     3901 ttcaatgata tcaaccggtt ttggcgaggc aacaacacgg cgatagccgc gaccagcatc
     3961 ttctttcaga gtgtaaccct gttttgtcag ttgctctgct tcttgctcgg taaagaacga
     4021 accgatcggc ttggtcgggt tgaggaatgc cggatcgtta gcgtcgactt cgacctgagt
     4081 aaccagcgtt gctacaggtt tattaatgcc ccgagaaagc agttcttctc ttaacacgtt
     4141 ttgtagatcg taaccaatat aaccctggct taaggcaaca cagacagaca tcggcagcat
     4201 tggcgagtgt gcttcagttt ttgcggcagc ttcaaaggcc tggttaatca tgcccacctg
     4261 cggcccgtta ccatgagtga cgataacttc atgtccttgg gcaattaaat caacaattgc
     4321 ctgagaagta atttttaccg ctttcatttg tccggccagg tcatcgccca gcgcattccc
     4381 gcccagggcg agaacaattt tcttactcat ttttcctcac tcatcattct tgattgtgta
     4441 tagatccctg acagtggtta gagcacggga gggacaaacg gtttgcgtcg caggaaacga
     4501 cctcgcccgg ctttgcctgt aaaggtgccg tcacagaaaa tcgtttcacc acgggataag
     4561 gttctgacaa tcgcgccctg acaggtaaaa ccctcccatg gcgagtagtc ggcgttgtcg
     4621 tggagatggc gatgctgaat ttgttggctc tgacgtgggt cgataatcac cacgtcgcca
     4681 tcggaaccgg gcgctaataa tcctttttgc ggccacaggc caaacagcct ggcgggcatt
     4741 gcgctggtta attcaacaaa gcgttccggt gttatacgtc ccgtcatcac gccactggaa
     4801 aacagtaact gcatgcggtt ttccacaccg ggtaagccat ttgggcagcg actgaaatcg
     4861 cctttagaaa tttgcaggcg ttgagccatc gagaaggtgc agtgatcggt cgccaccacg
     4921 tcaatcgcac catcgctgat gccacaccac agtttgtcct gctcgcgtac gttacgcagc
     4981 ggtgggctaa gaatgaactt catgccatct tctgtatcgt aactgcgttc gtccaacagg
     5041 agatattgtg ggcaggtttc aacccagact ggctggtgat tcgcacgggc aagacgcaga
     5101 taatccagac ctaagccgtt agacaggtgc acgatataga gcggggcgtt accggcaatt
     5161 tgtgccaggt taatcatgcg ggcgatggct tccgcttcgc attccagagg gcgactcaag
     5221 gcatgatagc gcggcgcggt taaccctgcg gcgataaatt ccgcccgctt gctggcgata
     5281 gccgcatcat tttccgggtg cacggtggtc agcgcgccgg attcatgcaa gcggcgtaat
     5341 gcctgcaaaa cctcgtcatc gttgagtttg tattgatagg ttaaatagag tttaaaactg
     5401 ctcagtcctt cctcgaccat catcgggatt tcgtcgagga ttgcgtgatt aatgtgctgg
     5461 atcacaccgt gaaagctgta atcgatgacc gctttatggg cggcataacc acgataaacc
     5521 tccagttgat ggcgtaaccg acagccgttt gggccaaatc ccatatggtc aataatggtt
     5581 gttgtaccgc cacacgcagc tgcgcgggta ccggtaaaaa aatcatcaca actgcgcgcg
     5641 atgccgacat caatattgaa atgcgtatgg acatccacgc cgcctgggaa aacgtaacag
     5701 ccagtggcat caatttcttc atacgggagc tgcggcgaaa tattgttgcc caactggcga
     5761 acaatcccgc tttcaatcag caaatcctgt ttggcttgtc catctgcgtt aacgacagtg
     5821 ccgtttttga tcaatacgcg catagcaaac tccaaaaacc ctccggcgaa ccggagggga
     5881 ataagtgaag agtaattact ctgttgccag ccagcttaac gggattgcag cgtacatcgc
     5941 ggcacaggtc accaggtgag atttccaggt tttttcgtta ggtgcatgcg cttcaggttc
     6001 tttacccggg ccaaagccga tcaccggaat gccgtgacgg cccatgatag atacgccgtt
     6061 agttgagaag gtccacttat caacaaccgg cgctttgcca aacagccctt cgtaggcatt
     6121 caccagtgct ttaacggtga agtgatcttc ttccactttc caggtcggga agtagcattc
     6181 ggttgggtaa accaggccag tccaggacgg acggtcgtag ttgtacatag aaacaaccgc
     6241 gttagctttc tgtactgcag gcagggcgcg gatttcgtcc agcgcgcctt cccaggtttc
     6301 gccccaggtc agacggcggt caatagagac ggcgcagcta tctgctacag cgcaacggct
     6361 tggggatgtg aagaagattt cagaaacggt gagggtgcct ttgccgagga attcgtcata
     6421 acccagacgt tgggagagtt cttgtaattc gccaagaatc ggacccattt tgaaaatggc
     6481 gttgtcaccg cgttctggcg cagaaccgtg gcagctaaca ccctgaacat caatacgaat
     6541 ttccatacga ccgcgctgac cacggtatat ctggcagtcg gttggttcgg tactgaccac
     6601 aaattccggg cgaatgccgg attgttcaat aatgtactgc cagcacagac cgtcgcagtc
     6661 ttcttcctgc acagtaccgg taaccagcag ggtatattca tcttccagac cgaggtcttt
     6721 aatgatttta ccggcataaa ccatagatgc catgccgcct tcctggtcgg aagtaccgcg
     6781 accaccgatt agctcatcag tttccatgcc ttcgtacgga tcgaagtccc agtttttgat
     6841 gttgccaatg ccgacggtat cgatatgagc gtccattgcc accagacgcg ggccgtggcc
     6901 gatataaccg agaacgttgc ccatcgggtc gatttcaact ttatcgaagc cgactttttc
     6961 catctcttct ttaatacgat gtactacgcg tttttcgtcg cagctttcac tgggaatagc
     7021 aaccatgtcg cgcaggaagc gagtcatgtc cgcctggtaa tcttttgctt tttcaagaat
     7081 cagtttgaat ggaatattct tagccattat ttttctccag attttttact ccccgttttg
     7141 cagggagtag ttccaatagg gtgattaagg tgctacagcg tgtttgcctt cccagacaac
     7201 ttcgcggtag tgcttcacgt cggtgtcgcc ttcagtactg ataaccagca ctacggcatc
     7261 tttgttcagc gccagttttt ccatcaggct ttgacgttgc gggtgataat gaaccgctgc
     7321 gagaacgccc aaaccgacag cgccggattc accggagatg atgcgcgggt cgttgccgta
     7381 cggattaccc agcacgcgca tacctaatgc ggcaacgctg tcctggcagg agatgaattg
     7441 ggtggcgcag ttacgtagga tttcccagcc cagcgggtta ggttcgccac aggccaggcc
     7501 cgccatgatg gtggccatat caccgccaac gttgacgatg tcgcctttga cgccggagcg
     7561 ataaatacag tcagctttgt caggttcaac aataatgctg tgcagatttt gcgggctgta
     7621 gacgtcgacc agataaccca gcacaccacc ggccattgct ccgacaccgg cttgcagcag
     7681 aacgtgcgtc ggggttacgc ccatttcacg catttgctcg acggcttcat ctgccagggt
     7741 tgcgtagcct tgcatgatcc aggttgggat tttggtgtaa ccttcccatg ccgtgtcctg
     7801 taccacttcc cagccgtgct gctgcgcgtg ttgcatggtc aggcgaacgg tatcgtcata
     7861 gttcatatcc gtgacgatgc actcggcacc gaggttcaga atggcgtcaa cgcgttcctg
     7921 agcagaacct ttcggcatgt aaatcaccgc attctgtccg agttgctgtg ctgcccacgc
     7981 cacaccgcgc ccgtggttgc cgtcggtggt ggtcgcgaaa gtcatttttt cgccgatggc
     8041 atttttcagg tgctcaaatg acagcgtttc gatatcaaga tgatattttt cacacaataa
     8101 ttgagcgatg gcgtacgcac cgccaagcat tttgaaggcg ttcagaccga atcgttttga
     8161 ttcgtctttg acgagaattt tcttcacacc aaaaaggttt gcgagatcgt ccagcgcaca
     8221 aagcggtgtt gggcgataac cagctatttt ctggtggaac tggcgcgcca gtttggcctg
     8281 gctttgcgaa aagagcggtg atgtttcgcc gttgaa
//
LOCUS       DAJVUK010000170         8312 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.170, whole genome shotgun sequence.
ACCESSION   DAJVUK010000170 DAJVUK010000000
VERSION     DAJVUK010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8312
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.170"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(95..1765)
                     /gene="hscC"
                     /locus_tag="OQQ57_003641"
     CDS             complement(95..1765)
                     /gene="hscC"
                     /locus_tag="OQQ57_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HCS1958254.1"
                     /translation="MDNAELTIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEIHASAGDSFLGGEDFTHMLVDEVLKRA
                     EVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSTQQIEESRTRLSALKIYPRDMLINRTFKAKLEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP"
     gene            complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="OQQ57_003642"
     CDS             complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="OQQ57_003642"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HCS1958255.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
                     DYYYLTDNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="OQQ57_003643"
     CDS             complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="OQQ57_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HCS1958256.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="OQQ57_003644"
     CDS             complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="OQQ57_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HCS1958257.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNIFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="OQQ57_003645"
     CDS             complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="OQQ57_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HCS1958258.1"
                     /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF
                     LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
                     ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAIIMLVMTLVERKVRLPGNMGGK"
     gene            complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="OQQ57_003646"
     CDS             complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="OQQ57_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
                     /protein_id="HCS1958259.1"
                     /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV
                     GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL
                     QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKDKAVVVTS
                     GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
                     PDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP
                     KNLNMNFELSDEMKALFKEPNDKALN"
     gene            6574..>8312
                     /locus_tag="OQQ57_003647"
     CDS             6574..>8312
                     /locus_tag="OQQ57_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HCS1958260.1"
                     /translation="MSASSVKPLNVQLPAITLILFALCIGIFCYLAQWMSYEEVDQSA
                     LIHLGANVAPLTLSGEPWRLLSSIFLHSSVSHLLMNMFAFLVVGGVAEQILGKWRLLI
                     TWLFSGVFGGLISACYALRDSDQIVISVGASGAIMGIAGAAIATQLASGAGTYHKNQR
                     RVFSLLGMVALTLLYGARQTGIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIV
                     AGSLLLTGAIWLAQQQMDESVLQVRQSLREAFYPQEIEQERRQKKQQLAEERNALRET
                     LSAPVSREQASGDLLAEIADIHDMAISRDGNMLYAAIENTNSIVVFDLGQKKILHTFT
                     APIAKEKSVKHCGGCKDQGVRSLALSPDEKLIYATSFEANALSVINVATGEIIQSITT
                     GAHPDSLILSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDGAGTSGKPGAWV
                     MALSPDERTLLVPGAGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVIFAD
                     SQGISRISVGDQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINAGQ
                     IIGVYPASYVNHLR"
BASE COUNT         2074 a         2053 c         2077 g         2108 t
ORIGIN      
        1 atgctctcgg caaaatcgcg atgttgttta gttgacgatg tgttttttgc gccgatgccg
       61 gatgcagcgt ttacgccgca tccggcagcc gtgtttatgg gatctcaatg gctaaataat
      121 cgctcgcccg ccgccgaact tcatccacgc gggccatgtc gtttgactgt agcgccgcat
      181 caaaatcggt gatcacccgg ccaatctctt ctcgctcgtc acccagcgct cgcgcccaca
      241 actcttccag tttggcttta aaggtgcgat tgatgagcat atcgcgcgga taaattttca
      301 atgcggataa ccgcgtccga ctctcttcaa tctgctgcgt gctcaatgtt accgggctgt
      361 ggttaatcac tctggactta acgctgccgt cttccagaag cacgtcaact tcaagcaacc
      421 cgttgatatc ataactaaag cgaatatcaa tcgactgata agccccggtt ttcttcaacg
      481 gcacatcgaa ggattcaacc agaatgttat ttttaacttt gtggttttct ccctgataga
      541 cgttaaccgt aattgaatcc tgctccgggt gcatggtcga gtaagtttct acacgcgaca
      601 ccggtactgt ggtgtttcgt tcaataatcg gcgagaaaat gccggaaacg ccctggcggt
      661 taacttcaac gcccaacgag taagggcaaa tatcagtgag gattacctct tcaatatctt
      721 cactgcgtaa gcggcaggcg gcctggattg ctgcgcccag cgcgacaatg gtgctcggat
      781 cgtaactttg atacggtaat ttgccaaaca gacgcacggc gattcgctgc accagcggca
      841 tttgtgacgc gccgccaacc agcaccagac tgtcgatttg actcggcttc agacgcgcat
      901 cgcgcaacgc ctgttcaatc ggcactcgca agcgattgag cagcggcaac cacaaatctt
      961 ccagttcgtt ctcgtaaaat tcgcattccc gcgtttcttc ctgatactgc cagcgaatgt
     1021 gcaatggcga ttgattgcta cattttgccg cttccacaca ggcgtacaag gctgccagtt
     1081 cactctcgtt aagcgtggtc ctggcaactt ccgcgcgttt taaaacctca tcgaccagca
     1141 tatgggtaaa atcttcgcca ccgaggaagc tatcgccagc ggaggcgtga atttcaatca
     1201 ccggcgtggc gtactcaagc accgtaacgt caaacgtgcc gccaccgaga tcaaaaacca
     1261 gcgagcgggt attttgttgc gtatgcaggc catatgccat cgcagctgct gtgggttcat
     1321 taattaagcg taccgcattt aacccggcta actccgcagc taaacgggta tgcttgcgtt
     1381 gttcatcgct gaaataagcc ggaacggaga tcaccacatc tttaatcgga cgttgcagaa
     1441 attcttcggc atcttctttt aatgagcgta ataccaaaga ggacagttct ggcgcgttaa
     1501 atgtgtcgct gcctaaccgc cagttggtat tactgcccat tgcgcgttta aataacgctg
     1561 ccgttttatc cggatgcgaa gtacgccgtg atacagccgg ttttccgact aaaatatgat
     1621 tattttcatc catgctaatt atggatggtg ttaaatattc accgaactta tttggaatta
     1681 attgcgcggc accgtctttc cagacggcaa ttaaactatt ggtagtgccg agatcgatac
     1741 caatggtgag ttctgcatta tccattgcat ttatatcttg aaagaaaaag agataaacag
     1801 attaagacca cccaggtaac gcgtggtgat cttaatcaat gacgtgtgtt aagcgtaaaa
     1861 tttcagacga tcagccagta aatcaacaaa gccctgacga tcaacatcga ccattacagt
     1921 ggcattcggt ttattgtcag tcagataata ataatcaaca accgtcatac cctgggtata
     1981 tttcccctgt gtttccacgc caacccagcg ctcaacagtg gtaaacaact cgggtttcaa
     2041 cagccaggcg atggtgcatg ggtcatgcag cggtgcaccg acaaagcccc atttttcgtc
     2101 tttatgatat tcgaggaaga aatccagcag ttcggcaaca atggttgaaa cagggttgcc
     2161 aatcgcgcgg aaacgctcgg tgtcttcaat gtggatttgc gctttatgag taacatccag
     2221 accggccatc accactggga tccctgactg gaagacaatt tctgccgctt ccgggtcaac
     2281 gtaaatatta aattcagccg caggcgtcca gttaccaagc cccattgcgc cgcccataat
     2341 cacgatacgg gcaattttgc tatgcagttc cggatggcta ttgagcagca aggcaacgtt
     2401 agtttgcggt ccggtagaca caatcgtgac aggttccgca ctttcgcgca gcgttttcgc
     2461 catcagctct accgccgtac agttttgcgg tgcgaacgtc ggttccggta atgccgggcc
     2521 atccagaccg ctttcgccgt gcacattgtc cgcgataatc aactcacgca ttaacggttt
     2581 taccgcgccg cctgctaccg gaatatcggt gcgattaagc aaggtcagca tacgcagaac
     2641 attgcgtaag gttttttctg gtgtctggtt tccggcggaa gacgtaattg ctttgacatc
     2701 aagctctggt gaggcgaggg cgagaactat tgcgatagcg tcgtcatgac ctgggtcgca
     2761 atctaacaga attggcagtg ccattgttgc tccttgttgt gtgcttcttt gcgacaaggg
     2821 taacgccagg atgtaacaga tacgaggggc gaaacgataa agcgtgagat ggcgcgcact
     2881 tgggtatgcg cgccagagtg attaatgcag gattttcgcg aggaagtctt tcgcgcggtc
     2941 cgatttcgga tcatcgaaga aagcgtcttt cggcgagtct tcgacaattt taccctcgtc
     3001 cataaagatc acccgattcg ccactttgcg ggcaaagccc atttcgtggg tcaccaccat
     3061 catggtcatt ccttcgttcg ccagttccac catcacgtcc agcacttcgt tgatcatctc
     3121 cggatccagc gccgatgtcg gttcgtcgaa cagcatcgca ataggatcca tacacaacgc
     3181 gcgagcgatt gccacacgct gctgctgacc gccggaaagc tgcgccggaa atttattggc
     3241 atgtgcggaa agtcccacgc gctccagcaa tttcaatgct ttttcacgag cgggcgcttt
     3301 atcgcgttta agcactttca cctgcgccag agtcaggttt tcaataatcg acaaatgggg
     3361 gaacaactca aaatgctgga acaccatccc gacgcgggaa cgcagctttg ccagatcggt
     3421 tttcttgtca ttaaccacga taccatcgac ggtgatttca ccttgctgca ctggttcgag
     3481 gccgttgacg gttttaatca gcgttgattt gccggaacca gacgggccgc aaaccaccac
     3541 cacttcgcct tttttcactt cggttgagca gtcggtcagc acctgaaagt gaccatacca
     3601 ttttgaaaca tttttcaggg taatcattat gctgtccttc ttttcaagta gctgaccaac
     3661 aacgacgcgc taagactaat aacgaaataa acaaatccgg caaacaggat catctcaacc
     3721 tgcgtaccat cacgctcacc aatggttgag gcggtacgga agaaatcggc cagagataac
     3781 acatacacca gtgaggtatc ctggaacagt acgatgccct gagtgagcag aagcggcacc
     3841 atcgcgcgga acgcctgcgg cagaataatc agtttcatcg actgccagtg agtcattccc
     3901 aacgccagcg cggcgctcga ctgaccacga gaaatacttt gaataccagc acggataatc
     3961 tctgaatagt aggccgcttc aaacatcgaa aacgccacca tcgccgaaat taaacggata
     4021 tcattttttg gtgataatcc cagcacgttt tgcagaaaac ctggcacgat caggtaaaac
     4081 cacagcaaaa ccataactaa aggaatcgag cggaatatgt taacgtaggc tttggcaaac
     4141 cacgctacgg gcgcaaagct ggacaagcgc atcaccgcca gcatggtgcc ccacaaaata
     4201 ccaatcacga ctgccgtgac ggtgattttc agcgtgatca ccagcccgtc gagcagatat
     4261 ggcagggaag ggacaatgga actccagtca aactcgtaca ttatttgccc cccatgttgc
     4321 caggcaggcg aactttacgt tcaaccagcg tcattaccag catgataatc gcgttaatca
     4381 acacatacgc cagcgtaata gcggtaaacg actcccaggc gtgggctgag taatcaagca
     4441 atttacccgc ctgcgccgcc atatccacca gaccaatagt cgaggcgatg gcggagtttt
     4501 tcaccaggtt catcatctcg gaagtcatcg gcgggacgat aacgcgataa gcattaggca
     4561 gcagtacgta tcgataagcc tgcggtagcg tcaggcccat cgccagcgcg gcattttttt
     4621 gcccacgcgg caacgactga atggcggcgc gtacctgttc gcaaacacgg gcggcggtaa
     4681 acagccccag gcagagcatg gatgaaagga aaaactgaat attgggatcc agctcggcct
     4741 taaaccacat gccgattttc tccggcaaca gctccgggat caccagatac caggtaaaga
     4801 attgcacaat caacggcacg ttgcggaaca gttcgacata caacgtaccc agaccggaga
     4861 gaaaacggtt tggaacggta cgtaaaatgc cgaaaaatga accgacgagg aaagcgataa
     4921 tccaggcgca gatcgacaaa gcgatcgtca cctgaaaacc actccagatc caaccaagat
     4981 aggtggtgtt gccgaacggg gcttgttgta aaaaaatacc ccagttccag tctatagaca
     5041 taaatctact ccagaaaaaa gagggtagca gcgttaactg ctaccctcga agattgttac
     5101 ccagcgtatt gcggttttca ggcccgatgg ggaacgacca tcaggcgtat agtctgtccg
     5161 tgctacgtaa caatcgagag ggctggaatt tccgcccctg gttcttgtaa ttagttcagt
     5221 gctttgtcat tcggttcttt gaacagtgct ttcatttcgt ctgacagttc gaaattcatg
     5281 ttcaggtttt tcggcggaat tggatttttg aaccatttat caaaccattt ttccgcttca
     5341 ccggaagtct gcacctgagc gatagtgtca tccatcagct ttttgaactg cggatcatct
     5401 ttacgcaaca tgcaaccgta ggcttcctga gactgcggct tgccgacgat atcccagttg
     5461 tctggtttct tcgctttcgc acgttcaccg gccagcaggg catcatccat cataaaggca
     5521 acggcacgac cgctttccag ggtgcggaaa gagtcaccgt gatctttggc gctgatgatg
     5581 cgcatattca ttttttgctc ttcattcagt ttgttgagca aaacttcaga ggtagtgccg
     5641 gaagtgacga ctacggcttt gtctttcagg tcggcaaaat ctttgatatc gccgcccttt
     5701 ttggtcagca ggcgcgtacc gaccacgaaa atagtatcag agaaagccgc ctgtttttgg
     5761 cgttcgacgt tgttggtggt agaaccacat tcaaaatcga aagtgccgtt ttgcagcagt
     5821 ggaatacggt tttgtgaggt aatcggaatc agttttacct gcaagtccgg tttgttgagt
     5881 ttctttttca ctgcttcaac aatggcgttg gagtaatcct gcgagtaacc caccactttt
     5941 tgctgattgt cgtaataaga gaaaggtact gaagattcac ggtgaccgac gacaatcaca
     6001 ccgtttttgg cgattttgtc cagcgtactg cctgctgccg gggcggcgtc atctgcctgt
     6061 gccagtcctg cggaaagcgc cagggcgagg attgctgtgg caggtttacg taattgcata
     6121 tccaactcct ttatcttctg cgttaagaac gcatggatac ccgttgtgag tgtttgtgtt
     6181 gttatcgtct gcaactttat tgtgcagtgt tgtgcctgtt aggtaacatt tagtttggct
     6241 aaatgtaaag atattgctgt tttattgttt gtttttgcga gatgcgccgc accattccga
     6301 agcaaaattc ttaaaccgca cctttttggt gctaccgctg atttgtggtg gtgcaacctg
     6361 gttgcgtcgc ggctgatttc atcgcttaca cagtaaataa agcaacttac atgccaaaaa
     6421 atacttaggg gcaaattaat tacgattgta attttaggct gaaaaagtca tatttcggac
     6481 agaattatct tttcggcatg ggacgtttgc cgggatgata actgcacacg ggaaaaatgc
     6541 tttttacctg tcttttcaag gaagaaacac cttatgtctg catcttcggt taagccgtta
     6601 aatgttcaat tacccgcaat aacccttatc ctttttgcac tctgtattgg gatattttgt
     6661 tatctcgcac aatggatgag ttatgaagag gtcgatcaat ccgcacttat ccatctcggc
     6721 gcaaacgttg cgcctcttac tttgtcgggt gaaccctggc gcttattgag cagtatcttt
     6781 ctgcacagta gtgtttctca tctgctgatg aatatgtttg cattcctggt cgtgggaggc
     6841 gtggcggaac agattctggg gaaatggcga ctcctgatta cctggttatt ctccggcgtc
     6901 tttggtgggc tcatcagcgc ctgttatgcg ttacgcgata gtgatcagat agtcatcagc
     6961 gttggggcat ccggggcaat tatgggaata gctggcgctg cgatagcaac acagcttgct
     7021 tcaggtgcgg gcacatacca taaaaaccag cggcgagtat tttctctgtt gggtatggtg
     7081 gcgctgacac tgttgtatgg tgcccggcaa acaggaatag ataatgcttg tcacattggc
     7141 ggcctgattg cgggtggcgc gttgggttgg ctgagcgcgc gtttatctgg gcaaaaccga
     7201 ctcgttacgg aaggcgggat tattgttgcg ggcagtcttc ttctgaccgg ggctatctgg
     7261 cttgcgcagc agcagatgga tgagtcagtt ttacaagtca ggcaaagcct gcgtgaagcg
     7321 ttttatccac aggagattga acaagagcga cggcaaaaaa agcagcagtt agcggaggaa
     7381 cgcaacgccc tcagggaaac attatccgct ccggtaagtc gtgaacaggc cagtggtgat
     7441 ttgctcgctg agattgccga tatccatgat atggcgatca gtcgggatgg taatatgttg
     7501 tatgccgcaa ttgaaaacac gaacagcatt gttgttttcg acctcggaca aaagaaaatc
     7561 ctgcatacct ttacagcgcc catagcgaaa gaaaagtcag tcaaacattg tggtggctgt
     7621 aaagatcagg gcgtcagatc gctggcatta agcccggatg aaaagttgat ttatgcgact
     7681 tcatttgaag cgaatgcgtt atcggtcatt aacgtggcga caggggagat tattcagtcg
     7741 attaccaccg gtgcacatcc tgacagcctt atcctctcgc gtgatggcac aaaagcctgg
     7801 gtgatgaatc gcaccagtaa tagtgtgtca gcgattgatc tggtgactta tcagcatgtg
     7861 gcggatatcc cgctggagaa atacgacggg gcggggacga gcggtaaacc aggcgcctgg
     7921 gttatggcac tttccccgga tgaaagaaca ttactggttc cgggagcagg cagaggtaac
     7981 atcgtgcgga tcaataccat cacgcatcag aaagaagact ttcccgcagg tgatgcgcgt
     8041 ggaacgatat cggcgatgcg ttttcgacct gaaaacggcg aggttatttt tgcagatagt
     8101 caggggattt cacgtataag cgtaggggat caacaagcca gcattatgac gcaatggtgt
     8161 agcaggagcg tttattccgt tgagggtatt agcccggacg gtcaatattt agcgttggtg
     8221 tcatatggcc tgcaaggtta tgtcatcctg ctcaatatta atgccgggca gattattggc
     8281 gtttatcctg ccagctacgt taatcacctt cg
//
LOCUS       DAJVUK010000171         8214 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.171, whole genome shotgun sequence.
ACCESSION   DAJVUK010000171 DAJVUK010000000
VERSION     DAJVUK010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8214
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.171"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..835)
                     /locus_tag="OQQ57_003648"
     CDS             complement(<1..835)
                     /locus_tag="OQQ57_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1958261.1"
                     /translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
                     ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
                     SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
                     LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
                     PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSSPDYH
                     GP"
     gene            927..1013
                     /locus_tag="OQQ57_003649"
                     /pseudo
     CDS             927..1013
                     /locus_tag="OQQ57_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869530.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1314..1403
                     /locus_tag="OQQ57_003650"
                     /pseudo
     CDS             1314..1403
                     /locus_tag="OQQ57_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
     gene            1427..5941
                     /locus_tag="OQQ57_003651"
                     /pseudo
     CDS             1427..5941
                     /locus_tag="OQQ57_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000536590.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
     gene            5942..7591
                     /locus_tag="OQQ57_003652"
     CDS             5942..7591
                     /locus_tag="OQQ57_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfaQ family protein"
                     /protein_id="HCS1958262.1"
                     /translation="MNWRRIVWLLALVTQPTLAEETPLQLALRGAQHDQLYQLSSSGV
                     TTVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
                     TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
                     TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
                     GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
                     TAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
                     AKSTPPEAAKAMTVAIHTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
                     QDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
                     TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
                     FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
     gene            7596..>8214
                     /locus_tag="OQQ57_003653"
     CDS             7596..>8214
                     /locus_tag="OQQ57_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958263.1"
                     /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
                     SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKIQQGRLVVNGASMPQRVESDGSF
                     ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
                     VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQV"
BASE COUNT         2003 a         1971 c         2310 g         1930 t
ORIGIN      
        1 gtgggccgtg gtagtccggc gaagaggtta atctttgcag ggcttgcaga gtgcgagtcg
       61 acaatggatt gttataaata ttaacatctg cataaatgtg cagattcatg atactgtctg
      121 gcaatgtgtt cagctgattg ttagggatat atagtgattg cagacgttgt ggaagttcgg
      181 gcagtctgtg tagttggttt tccccaacgt ttaaaagcct cagattttga ggaaggggcg
      241 gtagctcttg taatctgtta tcaaaagcac ttagttcctg tagttcacat ggtaattctg
      301 gtaaggcagt aagctggttg ttgccaacag aaagtttttg tagagccggg ggaagatcag
      361 gtagcgtctc caggctattg agaagggctg agagtgactg caaggaagat ggaagagaag
      421 gtaaacatgt taaaactctg ttaagtgaaa catcaagagc gaccaggtga ggcggaagag
      481 ccgggagcct gctcagtctg ttatcgctgg ctttaagtac agttaaggac ggagggagtt
      541 ctggcagaga gcgtagctca ttgctagaga tgttaagttc ttgtatgtgc gggggcaggt
      601 atgggagaga gcgtaatctg agtaaactta aattgagggc tggctcttga aaagccagac
      661 atattttcag taatcgaact gcctgtgttc ggtcttctgt tgcagcacct tccttggccc
      721 agttatccca gatgcggtga taatccgtga tattttgctc ttctacggat aaacgggata
      781 tacatcctaa accacaaaag gagcggaaaa aagaaggatt gtgggcaggt ttcatttatt
      841 attgatcctc attgtttata tattaatatg ttcgtgcaaa tggagtgagg attctttaaa
      901 aaaacgctcc tgtaaatagt taagaacagg aagaactgtt ggggatgtgg ctggccgaaa
      961 atgaaggggt gaagttctgg ctcaatgtgc tgactgaact gaaaaaacgc ggttggtcgc
     1021 cctacctttt catcaagcca gtagtctgcc caccactgca tcatttctct gcgcttatcg
     1081 agatactgag catggttgta aattcaacta acccagtgcg ttgacaaaaa attagcgcaa
     1141 gaagacaaaa aatcaccttg cgctaatgct ctgtatcagg tcactaatac cagctaagta
     1201 gttgattcat agtgactgta tatgttgtgc tttgtcgcat tttgtagtct attatttaat
     1261 ctgtaacaac gataatacaa tgaattttaa ttggtttttg tgattttgtc cttcttctga
     1321 catggaagga cacccgatgg atacccaacg attccaatcc caatttcatt ggcatttatc
     1381 gtttaaattt tctggcgcga tagcagcgtg cttgtctctg tctcttgtgg gaacagggct
     1441 tgctaatgct gatgattcgc ttccttccag taactatgcg ccgcccgccg ggggaacatt
     1501 ctttttgctt gctgacagca gttttagcag cagtgaagag gcgaaagtgc gactggaagc
     1561 gccggggcgt gattatcggc gctatcagat ggaagagtac ggcggcgtgg acgttcgcct
     1621 gtatcgtatt cctgacccga tggcattttt gcgccagcag aaaaacctgc atcgcattgt
     1681 ggtgcaaccg caatatctgg gcgacgggct gaacaatacg ctgacctggc tgtgggataa
     1741 ctggtacggc aaatctcgcc gcgtaatgca gcgtactttc tcttctcagt cacggcagaa
     1801 tgtgactcag gcattacctg aattacatct cggcaatgcc attattaaac cttcccgtta
     1861 tgtacagaac aaccagtttt ccccgctgaa aaaatatccc ttggtggaac agttccgtta
     1921 tccactatgg caggctaaac cggtcgagcc gcagcaaggg gtaaaactgg aaggcgcatc
     1981 cagcaatttc atctcgccgc agccgggtaa catttatatt cctctcggcc aacaagagcc
     2041 gggactgtac ctcgtcgagg cgatggttgg tgggtatcgg gcgacgacgg tggtgtttgt
     2101 ttccgatacc gtggctctta gcaaagtgtc aggcaacgag cttctggtgt ggaccgcggg
     2161 taaaaaacag ggtgaagcga agcccggctc agagatcttg tggactgacg gtcttggcgt
     2221 gatgacccgc ggtgtgaccg atgacagcgg taccttgcag ttacaacata tatcgccaga
     2281 acgttcatac attctgggta aggatgctga aggcggcgtt tttgtctccg agaacttctt
     2341 ctacgaaagc gaaatctaca acacccgctt gtatattttt accgatcgcc cgctatatcg
     2401 cgcaggcgat cgtgtcgatg ttaaagtgat gggccgcgag ttccacgatc cgttgcattc
     2461 atcccccatc gtcagcgccc cggcgaagct ttcggtgctg gacgctaacg gcagtctgtt
     2521 gcaaaccgtc gatgtcacgc tggatgcgcg caatggcggg cagggaagtt tccgcctgcc
     2581 agaaaatgcc gttgccggag gttatgagtt acgtcttgct taccgcaatc aggtctatag
     2641 cagcagtttt cgcgtggcaa actacatcaa gccacatttc gagattggtt tagctctcga
     2701 caaaaaagag ttcaaaactg gcgaagcggt cagcggcaaa ctgcaactgc tctacccgga
     2761 tggcgagccg gtaaaaaatg cccgcgtgca gttaagtttg cgcgctcagc aattatcaat
     2821 ggtcggtaac gatttgcgtt atgccggacg tttccccgtg tcgctggaag gcagcgaaac
     2881 ggtgtccgac gccagcggtc atgtggcgtt aaatctcccc gccgccgata aaccgagccg
     2941 ttatttgtta accgtctccg ccagtgacgg cgcggcgtat cgtgtcacca ccaccaaaga
     3001 gatcctcatt gaacgcggtc tggcgcatta ctcattaagt actgccgcac aatacagtaa
     3061 tagcggcgag tcggttgtgt tccgttatgc cgcgctggaa tcttcaaaac aggttcctgt
     3121 tacgtatgaa tggttgcgtc tcgaagaccg cacgagccat agcggagagc taccgtcagg
     3181 cggcaaatcc tttaccgtca atttcgctaa acctggcaac tacaatctga cattacgcga
     3241 taaagacggc ttaattctcg ctgggttaag ttatgccgtc agcggtaagg gcagcacggc
     3301 gcatacgggt acggtagata tcgtggcgga taaaacgctg taccagccag gcgaaaccgc
     3361 gaagatgctg attacctttc cggagccaat tgatgaagca ttattgacgc tggaacgcga
     3421 tcgcgtggaa cagcagtcgc tgctttcgca tccggcaaac tggctaacgc tacaacgttt
     3481 aaacgatacc cagtatgaag cccgggttcc agtgagcaat tcctttgcgc ctaacatcac
     3541 tttttcggtg ctgtataccc gtaatggtca gtacagtttt cagaacgccg ggatcaaagt
     3601 tgccgttcct cagcttgata tccgggtgaa aacggacaaa acccattacc agccaggtga
     3661 actggtcaat gtcgaattaa cctcgtcgct gaaaggtaaa cctgtttctg cgcagctaac
     3721 ggtaggcgtg gtcgatgaaa tgatctacgc gctgcaacca gaaatcgcgc cgaatatcgg
     3781 caaatttttc tatccgctgg ggcgtaacaa tgtgcgtacc agctccagtc tgtcgtttat
     3841 cagctacgac caggcgctct ccagcgagcc ggttgcgcct ggcgcaacta accgcagcga
     3901 gcggcgagta aaaatgcttg aacgtccacg gcgtgaagag gtggataccg cggcatggat
     3961 gccgtcactc acaaccgata aacaaggcaa agcgtatttc acgttcctga tgcctgattc
     4021 gttaacccgc tggcgtatca ccgcgcgtgg gatgaacggc gacgggctgg tcgggcaggg
     4081 gcgtgcttat ctgcgttcgg aaaaaaatct ctacatgaag tggagtatgc caacggtgta
     4141 tcgcgtgggc gacaaaccgg cggcaggact gtttatcttc agtcagcagg ataacgaacc
     4201 ggtggcgctg gtgactaaat ttgcaggcgc tgagatgcgc cagacgctga cgctgcacaa
     4261 aggggcgaat tatatttcgc tggcgcagaa tattcagcaa tctggcttgt taagtgcaga
     4321 actgcaacaa aatgggcaag tgcaggacag cattagcaca aaactgtctt ttgtggacaa
     4381 cagcaggccc gttgaacagc agaaaaatgt catgctcggc ggtggcgaga acgcgctgat
     4441 gttgcccgag caggcgagta atatccggct acaaagtagt gaaacgccgc aggagatttt
     4501 ccgcaacaat cttgatgcgt tagtcgatga accgtggggt ggggtgatca acaccggtag
     4561 ccgtctgatc ccgctcagtc tcgcctggcg ttcgcttgcc gatcatcaaa gtgccgccgc
     4621 taacgacatt cgtcagatga ttcaggataa ccgtctgcgg ctgatgcaac tggcggggcc
     4681 cggagcgcgc tttacctggt ggggtgaaga tggcaatggt gacgccttcc ttacggcatg
     4741 ggcatggtac gccgactggc aggccagcta ggcgctcggc gtaacgcaac aaccggaata
     4801 ctggcagcat atgctcgaca gttatgccga gcaggcggat aacatgccgt tattgcatcg
     4861 ggcgctggtg ctggcgtggg cacaggagat gaatctgccg tgcaaaacgt tgttgaaagg
     4921 gttggatgaa gctatcgccc ggcgcggaac taaagatgaa gatttctctg aggaagacat
     4981 ccgcgatatc aatgacagcc tgatcctcga tacaccggaa tctccactgg cagatgcggt
     5041 ggcaaacgtc ttaaccatga cgttgctgaa aaaagcgcag ttgaagtcca cggtgatgcc
     5101 acaggttcag caatatgcgt gggataaagc ggcaaacagc aatcagccgc tggcgcacac
     5161 ggttgtgctg ctcaatagcg gtggtgacgc tacccagacg gccgctattt taagtggttt
     5221 gaccgctgag caatccacta ttgagcgcgc gctggccatg aactggctgg cgaaatatat
     5281 ggcgacaatg cctccagttg ttttgcctgc gcctgcgggc gcatgggcta aacataagtt
     5341 aactggaggg ggcgaatact ggcgttgggt tggtcagggc gtgccggaca ttctctcttt
     5401 tggtgacgaa ttatcgccgc aaaatgtgca ggtccgctgg cgtgagccgg caaaaatggc
     5461 tcaacaaagt aacattccgg tgaccgttga acgccagttg tatcggctta tccctggtga
     5521 agaagagatg agctttattc tgcaaccggt gaccagcaat gagattgaca gcgatgcgct
     5581 gtatctcgat gacatcacgc ttaccagcga gcaggatgca gttctgcgct acggtcaggt
     5641 ggaagtaccg ctgccaccgg gagccgacgt tgagcgcaca acatggggca tttcggtcaa
     5701 taaacccaac gccgcgaaac agcaggggca attgctggaa aaagcgcgaa atgaaatggg
     5761 cgaactggcc tatatggtgc cggtgaaaga actgacggga acggtcactt tccgccattt
     5821 gctgcgcttc tcgcaaaaag ggcaattcgt tctgcctcct gctcgttatg tgcgttccta
     5881 tgcacctgca cagcaaagtg ttgcggcagg gagtgaatgg accgggatgc aggtgaaata
     5941 agtgaactgg cgcagaatcg tctggctatt ggcgttggtt actcagccaa cgcttgcgga
     6001 ggagacgccg ttacaactgg cactgcgtgg tgcgcagcac gatcaactgt atcagctgtc
     6061 gtcatcaggc gtgaccacag tctcagcatt acctgactcg ctcaccacgc cgttagggag
     6121 tttgtggaaa ctgtatgttt acgcctggct ggaggatacc catcaaccgg agcagcccta
     6181 ccagtgtcgc ggaaactccc cggaagaggt ttattgttgt caggctgggg agagcataac
     6241 gcgcgatacc gcgctggtac gttcctgtgg gctctatttt gcgccgcagc ggttgcatat
     6301 tggcgcagat gtgtgggggc aatactggca acagcgtcag gcgcctgcgt ggttagcgtc
     6361 tcttactacg ctgaagccag aaacctcggt aacggttaaa tcgctgcttg attcattagc
     6421 gacgttacct gcgcaaaaca aagctcagga agtcttactg gatgtggtgc tggacgaggc
     6481 gaaaatcggt gtcgcatcca tgctcggtag tcgggtacgg gtgaaaacct ggagctggtt
     6541 tgccgatgat aaacaggaaa tccgtcaggg tggttttgcc ggctggttaa ccgatggtac
     6601 accgctgtgg gttactggca gtggcaccag caaaacggta ctaacccgtt atgcgacagt
     6661 gcttaatcgg gttttgccag tgccgacgca ggttgccagt gggcaatgtg tagaggtgga
     6721 gctgtttgcc cgctatccgc tgaagaaaat cacagcggaa aagagtacga cggcagtaaa
     6781 acccggcgta cttaatgggc gctatcgtgt gacgtttact aatggtaacc acattacgtt
     6841 tgttagccac ggtgagacga ccttactgag cgaaaagggc aaactgaaat tgcagtcgca
     6901 tctcgatcgt gaagagtacg ttgccagagt tctggatcgc gaggcgaaaa gtacgccccc
     6961 tgaggcagcg aaagccatga ccgtggcgat tcacactttt ttacagcaaa acgccaatcg
     7021 ggaaggcgat tgcctgacca tccccgacag cagcgccacg cagcgtgttt ctgcttcgcc
     7081 agcgaccacg ggggcgcgaa cgatgaccgc ctggacgcag gatctcatct atgcaggcga
     7141 tccggttcat tatcatggca gtcgagctac cgaagggaca ctttcctggc ggcaagccac
     7201 ggcccaggcg gggcagggag agcgttacga ccagatactc gcgtttgctt atcccgacaa
     7261 cagccttagc cgctggggag cgccacgctc aacctgccag ttattaccca aagcgaaagc
     7321 ctggctggcg aaaaaaatgc cgcagtggcg gcgtatatta caaggcgaga cggggtacaa
     7381 cgaaccagac gtgtttgcgg tctgtcgttt agtctcaggt ttcccctata ccgatcggca
     7441 gcagaaacgg ctgtttattc gtaacttctt tacgcttcag gatcggctgg atttaaccca
     7501 tgagtatctg cacctggcct ttgatggtta tcccaccggg cttgatgaga actatatcga
     7561 aacgctgacc cgacaattat taatggacta atgctatgcg aaagattttt cttccgttgt
     7621 tactggtggc actttcgcct gtcgctcaca gtgaaggtgt gcaggaagtc gagattgacg
     7681 caccgctctc tggctggcat ccggcagagg gcgaagatgc cagtttttca caatcgatca
     7741 attacccggc gtcgtccgtc aacatggcag atgatcaaaa tatctcagcg cagatccgcg
     7801 gcaaaataaa gaattatgct gcggcgggta aaattcagca gggccggctg gtggtcaacg
     7861 gtgccagtat gccgcagaga gttgaatccg atggttcatt tgcacgccct tatattttca
     7921 ctgaaggcag caacagcgtg caggtcatca gcccggatgg gcaaagccga caaaaaatgc
     7981 agttttactc aacgccgggt acaggaacga ttcgtgcacg tttacggctg gttctctcgt
     8041 gggatacgga caataccgat ctcgatctcc atgttgtcac gcccgatggc gaacacgcct
     8101 ggtacggtaa caccgtgctg aaaaacagtg gtgcactgga tatggatgtc acgacggggt
     8161 acggacccga gattttcgcc atgccagcgc cagttcacgg acgctatcag gtgt
//
LOCUS       DAJVUK010000172         8107 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.172, whole genome shotgun sequence.
ACCESSION   DAJVUK010000172 DAJVUK010000000
VERSION     DAJVUK010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8107
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.172"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..393)
                     /locus_tag="OQQ57_003654"
                     /pseudo
     CDS             complement(1..393)
                     /locus_tag="OQQ57_003654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151035092.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
     gene            complement(579..3887)
                     /gene="icsA"
                     /locus_tag="OQQ57_003655"
                     /gene_synonym="virG"
     CDS             complement(579..3887)
                     /gene="icsA"
                     /locus_tag="OQQ57_003655"
                     /gene_synonym="virG"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane autotransporter IcsA"
                     /protein_id="HCS1958264.1"
                     /translation="MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLL
                     LGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHAS
                     RTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGA
                     DHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLPIINKGTIS
                     GGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDN
                     LSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNN
                     SLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVS
                     GDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
                     VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVST
                     ILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNINAGILKMGTVEAMTRTA
                     GVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVIL
                     NNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEITGHASGITYVAVTNEG
                     GSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMD
                     NQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSP
                     SLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDILK
                     TNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTGL
                     YMDAWLQYGWFNNTVKGDGFTGEKYSSKGITGALEAGYIYPTIRWTTHNNIDNALYLN
                     PQVQITRHGVKANDYIEHNGTMVTSSGVNNIQAKLGLRTSLISHSCIDKETLRKFEPF
                     LEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNS
                     YRDTQGILGVKYTF"
     gene            4416..5618
                     /gene="virA"
                     /locus_tag="OQQ57_003656"
     CDS             4416..5618
                     /gene="virA"
                     /locus_tag="OQQ57_003656"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858314.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-tubulin-specific protease"
                     /protein_id="HCS1958265.1"
                     /translation="MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDVLLKIITFG
                     IYSPHETLAEKYSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYL
                     DGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAIN
                     CCTSIIPNDDYFPVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINE
                     LGINEFIDSKKELQMLSYNQLNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTS
                     AFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAI
                     SASGGRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVS
                     FAIISPDV"
     gene            5797..6484
                     /locus_tag="OQQ57_003657"
                     /pseudo
     CDS             5797..6484
                     /locus_tag="OQQ57_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     misc_feature    6077..6193
                     /locus_tag="OQQ57_003657"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01497"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="AL1L pseudoknot; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /pseudo
                     /db_xref="RFAM:RF01497"
     gene            6486..6852
                     /locus_tag="OQQ57_003658"
                     /pseudo
     CDS             6486..6852
                     /locus_tag="OQQ57_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            6780..7253
                     /locus_tag="OQQ57_003659"
                     /pseudo
     CDS             6780..7253
                     /locus_tag="OQQ57_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708890.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase
                     domain-containing protein"
BASE COUNT         2387 a         1864 c         1615 g         2241 t
ORIGIN      
        1 tcaggctgta cgcttcccca tgtgatttgc ctcgccactt caccgggctc aggaccccgt
       61 aggatcttca ccgaaaaaaa tgcatcacca gttgctttat tatttgtttt aggtagacct
      121 gttactaatt tatacctact ctgaccaagt ctggataaga aaggcacacc tgcacatttc
      181 tacttggaaa tgttttcttt taccattttg ctcaaaaatt tcaacatcca atattcctcg
      241 tacagaacta ctcaagtcct gaatagaaaa agttccagct ggtacagtag agtcatatat
      301 tgctcgacct tgttgagata caacaacacg tgcattagtt tctgcaatac cagtaatctg
      361 aggcgcataa ccacgaatat ttggcggtag cattcgttca tcgctttcta atgcaattcc
      421 tgtgtaacgc caagcaacag cgcattctgg cgcatgatct ggtaaacacg tttggcattg
      481 atcgcaggca taccatcatg tgcacaaaaa cccaccgagc ttttacacgg tgggtcccag
      541 agaaatgcag gacatcaaca cgccctgcat ttttattatc agaaggtata tttcacaccc
      601 aaaatacctt gggtgtctct gtaactgtta ttacccaatt gctgagatac gtttccccag
      661 atgcttaggt tatctgcaag acgccccccc acaccagttt tgagttcaat cacattacgg
      721 ttgcctatct ggtgatttga catgccattc ataattacac catattgctt tgagctccat
      781 ttccaattca cttccaaaaa tggttcgaac ttacgaagag tctccttatc gatacaacta
      841 tgactaatta aggatgtacg caatcccaat tttgcttgaa tattattgac cccagaggat
      901 gtgaccatag tgccattgtg ttcaatatag tcgtttgctt ttaccccatg cctagttatc
      961 tggacttgtg gattgagata caatgcgttg tcaatattat tatgagtagt ccagcgtatg
     1021 gttgggtaga tatagccagc ttccaaagct cctgttattc ctttgctgga atatttctca
     1081 ccagtaaacc catctccttt gactgtatta ttaaaccaac cgtactgcaa ccaagcatcc
     1141 atatatagac ctgttcgttc tttttcatcc tgaaaccaag aactgtacaa accggcagta
     1201 taaccgctca cagttcctcg tgaactataa ctagtatact tattatgagt tttgctatcc
     1261 tgatatccat aagctcccat aatacccaca tgcaagccat catgatcagt gaagtttgtc
     1321 ttcaaaatat ctccaccaat ctgataaacc atcctgttag ctgtggtttt taattgtcta
     1381 tcagctaaat tatgctcatt atgtccacca acagtacgaa tccacatggt ggtttcgctg
     1441 agctgacctg tagtaggatc aacaatagtg ctaccgtgtc ggtcatagag agaaggacta
     1501 aacatcgtgt tcattgctat caggttagca atataactgc cagcttcagg gcgccatgtg
     1561 tgaatactac cttcacccaa attaagtgaa gatacaagct gtgaactagc tcggcgacta
     1621 ctcatttgag tagactcttg attgctcatc tgttttgatt cttgattatc catctgacta
     1681 gttagatacc acttattggt attcagtcca gatacagtgc cctgtttcag gcgatagtca
     1741 taactaccag caacaatacg gcctttctga ataaaagcat tcttatcaga agaatctgtc
     1801 gaaataattt gaacaccttc aagagtttta tctccagagc ctccctcatt tgtcactgca
     1861 acataggtaa taccagacgc atggcctgta atttccagcc ggtcagtttt actgttgtca
     1921 ttgccgagaa ccgcgcccaa agataatatt ccgccctttc catgccaatt acctttctga
     1981 acataggtct gaccgacatt tgacgaacta ttattgagaa taacatgacc gtttttctcc
     2041 agagtcatgt tacctgtgac aatgacgggg tcaggcaaaa aaggggcatt aatattattg
     2101 attagcacag tcccactatt taataaagtg ttaacagttt ggttcatgcc tgaaaaattc
     2161 aaggtagcac ctttattaac aataacacca gcggtacgtg tcatagcttc aactgtcccc
     2221 atttttagaa tgcctgcatt gatgttggtg aaaccagagt aggtattttt ttccgccaaa
     2281 atgagagttc cctcccctga ttttgttagg gattttccgt cccagctatt tatattatga
     2341 tggctgagat tatctgccag aatagtacta acagtaagtt cagcgttttc tttcagattg
     2401 aactctccat gactgtcgcc atctgtatca ttccagctca aaccgtagat caatttattc
     2461 tggtcactga tatagctttt tgtatagtca atagcaccag tagtgagtaa cggattgatg
     2521 atagatatat tagaaacact gaaacctgtt atccctttat ctgcacttag cagtttatag
     2581 tccttctgcg cccagttatt tataatagct tccactttta cattgttgcc aaatgacata
     2641 tttccagaag cttccagact actgattcca gctaaattta aagaactgtt ctcaccaaaa
     2701 gaaacgtcac ctgaaacagt gaatttgtta cctgatagtg aaacagttgt acaatcacca
     2761 gcacataaat caccttcaat agttggtgtg gtcccagtgt aatcattgtt gataattttc
     2821 agaatggatg aattgttaac ctgtacatca ccagtaatga cagaaccttc atggagtatt
     2881 aatgaattgt ttccaccagt gatgtggata gcattacctg ctacattttg tgttccatca
     2941 tcttctttac ctgaaattat atatccgcta ttagcaatgg tcatattgct accatttata
     3001 gcatcccccc aatgtccacc attaccgcct aaaatagctc cattgttgat tatagacagg
     3061 ttatctcctg tgatagcatt accaccgtag ccatcataac cataaccgta agcagcacct
     3121 ccgttgcctc cagcgaacgt gcccttattg attacagaga ggctgcttcc tgtgatggca
     3181 tcacctccat taccgccatc accctcacca taattgttac ctccattacc accggaaata
     3241 gtccctttgt tgattatggg tagattgact cctgtgacgg catcacctcc attcccccca
     3301 tcactatcac tataactatc gccaccatgt ccacctgaaa taatttctcc atttattata
     3361 aacagattgt ctcctgtaac agcctcacca ccatcaccgt tatggtcagc accgctaccg
     3421 ccgctaccac caagaatcat gccttgattg attatagaca agtcagatcc ggtaatagag
     3481 tcaccaccat taccgccaca actattacca tcattattat caccagcacc accatgacct
     3541 gcgctaatca taatatcaga gttaatccgt agcttagttc tagatgcatg agaggggttg
     3601 gaagaagtta tataccacgc atccattcca tcttcaccag ctcccaaggg agaaagtcca
     3661 tcaacaggtg ttaataattt ttcataattg tcctctgaaa aatgaagttc ttgagtaccc
     3721 gaaagaggaa tagcaaaagc tattggcccc ccgagcaaca gggatgcacc aacaacaaaa
     3781 ggagaaaaag acaatttgca tgttttttcc tttaccgtag gtaattctcc ggcccccccc
     3841 tgtgaacatt gggtcatatt acaaaaaaat ttgtgaattt gattcatgca ctatattatc
     3901 agtaagtggt tgataaaccc ctaaaaagat tccgttttat ccggaataaa gggacgatat
     3961 atgcaaaaac atattaaaca aagcctcaac caaaacatga gagctgtgtt atatatcaat
     4021 gcaacgggag aaatttacct gtgtcttgct ttgaaaaaaa gagggggaaa gctatatgtt
     4081 cgataataaa ttaataattt tactatgata gtctgcttca gaccgcaact tttcagttct
     4141 ttctgtacgc ttgcccaaag tttaaccact ttgtttttct atacacccaa tggttctatc
     4201 tgccccttga tgttaatccc caaagccaat aacatgaatg tattcatatc acaactttcc
     4261 taccagactc tccaatgcaa taactgcata attgttttta gtggaaatgt atcgttttct
     4321 taaagagaag aataacattc cattttatta tgttcccaat ttaattatat taatatatat
     4381 tggcatcaat aggaaaatac atcaggagaa atcaaatgca gacatcaaac ataactaacc
     4441 atgaaagaaa tgactcatca tggatgtcaa ctgtcaaatc aactacagaa gtaagttgga
     4501 ataaattgag tttttgtgac gttttactga aaataataac tttcggaata tattctccac
     4561 acgaaactct agccgaaaaa tatagcgaaa aaaaactaat ggatagtttc tcaccatcac
     4621 tatcacaaga taaaatggac ggagagtttg cccacgcaaa catagatggc atttcaatac
     4681 ggctatgcct taacaaaggc atatgttcgg ttttttatct tgatggagat aaaatacaat
     4741 ccactcaact ttcatcaaaa gaatataata acttgttaag ttcactcccc cccaaacaat
     4801 tcaacttagg aaaagtacat actattacag ctccggtatc agggaatttt aaaactcaca
     4861 agcctgcacc agaagttatt gaaacagcca ttaattgctg tacatcgata ataccaaacg
     4921 atgattactt ccccgttaaa gacactgatt ttaatagtgt ttggcatgat atttacagag
     4981 atattcgagc atctgacagc aatagtacaa aaatatattt caacaatatt gaaataccac
     5041 taaaattaat tgcagatcta attaatgagt taggaattaa tgaattcatt gatagcaaaa
     5101 aagagcttca aatgctaagt tacaaccaat taaataaaat aatcaattca aacttccccc
     5161 aacaagacct atgttttcaa acagaaaaac ttttgtttac ttcactcttt caagaccctg
     5221 catttatatc cgcactaaca tctgcattct ggcaatctct tcacatcacg tcttcctctg
     5281 tggaacacat atatgcccaa attatgtccg aaaacataga aaacaggctt aatttcatgc
     5341 ctgaacaacg agttattaac aattgtggac atattataaa aatcaacgca gttgtcccta
     5401 aaaacgacac tgcaatctct gcctctgggg ggagggctta cgaagttagc tcatcaatat
     5461 taccatcgca cataacatgt aatggtgttg gtattaataa aatagaaaca agctatctcg
     5521 ttcatgctgg aacacttcca agcagtgaag ggcttcgcaa tgctatccct ccagaaagtc
     5581 gtcaagtatc atttgccatc atatctcctg atgtttaagc caatattata ttggctgcca
     5641 gactgtaaaa aaacgttctt cagaacagct ctataaacta ttaaaccaaa gctaaaagga
     5701 tggggaccaa tagaatctca gcccatcctt tttatatcat tatgaaccgc cccggaaatc
     5761 ctggagacta aactccctga gaaagaggta aacaggatga ctaaaaatac acgtttttcc
     5821 cctgaagtcc gtcaacgggc agttcgtatg gttctggaaa gtcagggcga atatgactca
     5881 caatgggcag cgatttgttc cattgctcca aagattggct gtatactgga gactctgcgt
     5941 gtctgggtac gccagcatga gcgggatacc gggggcggtg aggtgggctc accaccgctg
     6001 aacgtcagcg tctgaaagag ccggaacgtg aaaatcgtga actgcgccgc agtaacaata
     6061 tccttcgcct ggcttccgct tattttgcaa aggcggagtt cgaccgcctc tggaaaaaat
     6121 aatgccactg ctggataagc tgcgtgagca gtacggggtc ggaccggtat gcagtgaact
     6181 gcatattgcc ccgtcaacgt attaccactg tcagcaacag cgacatcatc atgataaacg
     6241 cagtgcccgt gcgcagcgcg atgactggct gaagaaagag atactgcgcg tatacgatga
     6301 gaatcatcag gtatacgctg tgcgtaaagt caggcatcag ttgttacggg aaggtatcag
     6361 agtggccaga tgcactgtgg cacgtctcat ggcggttatg gggcttgccg gtgttctccg
     6421 gggtaaaaag gtccacacta ccgtcagccg gaaagccgtt gccgcaggcg accgcgtaaa
     6481 ccgtcatcaa ggcaatgtgc cgcgtactcc gggtggcccg cagcggctgg tatacgtggt
     6541 gtcagcggcg gacaaggata aacacacgtc agcagttccg tcagcactgc gacagcgttg
     6601 tccgcaaggc ttttacccag tccagcgtta cggtgcccca cgcctgacgg atgaactgtg
     6661 tgctctggtt accactttaa cgtaaaaacc gtggcagcca gtctgcgccg tcaggaactg
     6721 agcgcaaaag cctcccagaa gttcagcccg atcagttacc gtgcacacgg cctgcctgta
     6781 tcagaaaatc tgctgacgca ggatttttac gccagtggcc cgaaccagaa gtgggcggga
     6841 gacatcacgt actattacag ctcaccgact gcggggaaac acggggcgcc gggttattga
     6901 aggtgacctg tccagctact tcgacacagt acatcaccgg ctgctgatga aagccgtctg
     6961 ccgcaggatc agtgatgcac gttttatgag actgctgtgg aaaacgccgt gttgatgttg
     7021 gtctcttccg ggcggtcagt gaaagtatgc cacagggcgg tgtgatctcg ccgttgctgt
     7081 cgaacatcat actgaatgag ttcgaccagt atctgaataa acgctacctg agtggaaaag
     7141 ccagaaagga tcgctggtac tggaatcaca gtatccagcg aggccgaagt actgctgtca
     7201 aagaaaactg gcaatggaaa cctgccgttg cttactgttg ctatgccgat gactgtgtgc
     7261 cacgaaggcg cgtcctgggg acgtgagtcc ctgtgcagcc atgcggcaca agagatgagg
     7321 gaaggcccct cggtgtcggc gtgcaggcgc aggcaccaaa ccatccactg ctgctgcatt
     7381 taagagatgt ggtggtgagc gagatgggaa aaggtcggac gtgagccgat caggtatggt
     7441 tcgaagagac gaacgaaagt gaaccgctga tgatgtgtcg aaagcatata gatgatgtca
     7501 aaacaatggt ggagtcgttc ctgtgggata tgtttactgc ctgcgcggca tccggcataa
     7561 aagcggcgtg aagtcgattc aggctcttgt ggggaacgtg gacctgtcac cccgatgtga
     7621 agggagaagc gcaagtggaa gccccatgag cgccagagta ccaatgcggg gtacagggac
     7681 ggagcaccaa gcgattgcgc agtaaacatg cttgacaact taattggggc cccctcttcc
     7741 ttttatggtg taattgtttg attgaatact tccggggatt tcagtatgaa atgaagtata
     7801 tttaatatac tttacaaaaa gtttgtatta gtggaataag gacaatagtt tatccaaact
     7861 gccaagcccc tttattataa gtaagatctg gtactaaata agcgttctaa accgacccga
     7921 gtaggcggcc tgacggctgc ggcttgtcat ggcctgtgat taccgttata aaaacagaca
     7981 atatcattgt ctttcaggta gttatatggc ccgttcagct aaaccacgca aacgaaaacc
     8041 tgcacctcaa agaagcaaac tcctccacta tgtcgtaaaa cttcacgaag atgatttttt
     8101 ttgacga
//
LOCUS       DAJVUK010000173         8094 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.173, whole genome shotgun sequence.
ACCESSION   DAJVUK010000173 DAJVUK010000000
VERSION     DAJVUK010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8094
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.173"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(122..853)
                     /gene="dnaQ"
                     /locus_tag="OQQ57_003660"
     CDS             complement(122..853)
                     /gene="dnaQ"
                     /locus_tag="OQQ57_003660"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HCS1958266.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            918..1385
                     /gene="rnhA"
                     /locus_tag="OQQ57_003661"
     CDS             918..1385
                     /gene="rnhA"
                     /locus_tag="OQQ57_003661"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HCS1958267.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(1382..2104)
                     /locus_tag="OQQ57_003662"
     CDS             complement(1382..2104)
                     /locus_tag="OQQ57_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308236.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCS1958268.1"
                     /translation="MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLRETDRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            2138..2893
                     /gene="gloB"
                     /locus_tag="OQQ57_003663"
     CDS             2138..2893
                     /gene="gloB"
                     /locus_tag="OQQ57_003663"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HCS1958269.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
                     TEDIDLINVINEETLLQQPEERFAWLRSKKDRF"
     gene            2965..4323
                     /gene="mltD"
                     /locus_tag="OQQ57_003664"
     CDS             2965..4323
                     /gene="mltD"
                     /locus_tag="OQQ57_003664"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HCS1958270.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRDSLASGEIAAVQSTLVAD
                     NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(4372..4968)
                     /locus_tag="OQQ57_003665"
                     /pseudo
     CDS             complement(4372..4968)
                     /locus_tag="OQQ57_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308233.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
     gene            complement(4999..5799)
                     /locus_tag="OQQ57_003666"
     CDS             complement(4999..5799)
                     /locus_tag="OQQ57_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HCS1958271.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPLGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            6040..6954
                     /locus_tag="OQQ57_003667"
     CDS             6040..6954
                     /locus_tag="OQQ57_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1958272.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDREIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(6951..7744)
                     /gene="dkgB"
                     /locus_tag="OQQ57_003668"
                     /pseudo
     CDS             complement(6951..7744)
                     /gene="dkgB"
                     /locus_tag="OQQ57_003668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414743.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
     gene            complement(7906..7982)
                     /locus_tag="OQQ57_003669"
     tRNA            complement(7906..7982)
                     /locus_tag="OQQ57_003669"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7946..7948),aa:Asp,seq:gtc)
BASE COUNT         2147 a         1961 c         1967 g         2019 t
ORIGIN      
        1 cgttgggaac gaggcgaata ttacggattg cctcaccctt cgtcaacggt ttttctcatc
       61 ttttgaatcg tttgctgcaa aaatcgccca agccgctatt tttagcgcct tttacaggta
      121 tttatgcccg ccagaggcag cttccgccct tcttctccac cagatcaaga cgggcttcat
      181 gagctgcaag ctcttcatct gtcgcaaaaa caacgcgtaa cttacttgcc tgacgtacaa
      241 tgcgctgaat tgttgcttca ccttgttgct gctgtgtctc tccttccatc gcaaaagcca
      301 tcgacgtttg accaccggtc atcgccagat aaacttccgc aaggatctgt gcatcgagta
      361 atgccccgtg tagcgttcgt ttactgttat ctatttcgta gcgggcacat aacgcatcga
      421 ggctgttgcg cttaccagga aacattttcc tcgccaccgc aaggctatcg gtgaccttac
      481 agaaggtatt ggtcttcgga atatcgcgct taagcaacga aaactcgtag tccataaagc
      541 cgatatcgaa cgctgcgtta tggatcacca actccgcgcc gcggatatag tccatgaact
      601 catcggctac ttcggcaaac gtgggcttat cgagcaaaaa ttcatcggca ataccatgta
      661 cgccaaaggc ttccggatcc accagccgat cgggtttgag ataaacatgg aagttattgc
      721 ccgtcaggcg acggttcacc acttcaacgg caccaatctc aatgatcttg tggccttcat
      781 agtgcgcacc aatctggttc ataccggtgg tttcggtatc gagaacgatc tggcgtgtaa
      841 ttgcagtgct catagcggtc atttatgtca gacttatcgt tttacagttc gattcaatta
      901 caggaagtct accagagatg cttaaacagg tagaaatttt caccgatggt tcgtgtctgg
      961 gcaatccagg acctgggggt tacggcgcta ttttacgcta tcgcggacgc gagaaaacct
     1021 ttagcgcagg ctacacccgc accaccaaca accgtatgga gttgatggcc gctattgtcg
     1081 cgctggaggc gttaaaagaa cattgcgaag tcattttgag taccgacagc cagtatgtcc
     1141 gccagggtat cacccagtgg atccataact ggaaaaaacg tggctggaaa accgcagaca
     1201 aaaaaccagt aaaaaatgtc gatctctggc aacgtcttga tgctgcccta gggcaacatc
     1261 aaatcaaatg ggaatgggtt aaaggccatg ccggacaccc ggaaaacgaa cgctgtgatg
     1321 aactggctcg tgctgcggca atgaatccca cactggaaga tacgggctac caagtcgaag
     1381 tttaagcttg tggtttacga cattgccggg tggctccaac cgcttggcga attcgtggct
     1441 tgtttttact ctgtttcatc gggtttagcg ttaaaggaat agtccgtttc cgggcaacaa
     1501 taagttgtaa gcaaccaagc gcaggaatat gcgcattcaa tagttttcct ccgtgtttgt
     1561 tccacgggag aacgtggaaa cggctggcgt gcagcacttc aaaattcaac aaagagagcc
     1621 agtccagttg ccgcatcaga gtaaacatcc ggctgttata gggcgaggtt tttcgcaata
     1681 ccggcacaag tttgcgtaat cccattaaac taatgggatt gaagccacta atcaccagcc
     1741 agccatcatc aatcaatacc cgatcggttt cacgcaataa acgatgcgga tcggtgcacc
     1801 acggcaatgt atgtgccagt agacaaacat caacggattt atcggcaaaa ggaagatgaa
     1861 gtggatccgc ctgcacctgg acgggcattc cttgcgcaga aacattcact tgatgagaaa
     1921 ccgcgcacgc ttcgcaattg atttctgcgc ttaaattgcc aatcttaagc agatgaaaac
     1981 catacatttt agtgaaccac gggttgagct ggcgctccag cgccttgcga taaagctctc
     2041 cccagggcaa atcgccccag cgatcaggag ccacgacagt ttgagggact cttgccggtt
     2101 tcatcacaac cttccgtttc acactaagag gtaatctatg aatcttaaca gtattcccgc
     2161 ctttgatgac aattacatct gggttttgaa tgatgaagca ggtcgctgcc tgattgtcga
     2221 tcccggagac gcagagccag tattaaacgc cattgccgcc aataactggc aaccggaggc
     2281 catatttctc acccaccatc atcacgatca cgttggcggc gtaaaagaac tggtggaaaa
     2341 gtttccgcaa attgtggtgt atggtccaca agagacacaa gataagggaa caacacaggt
     2401 agtcaaagat ggcgaaactg ccttcgtttt ggggcatgaa tttagtgtaa ttgccacacc
     2461 gggtcacact ttaggacata tctgttactt cagtaaacct tatctatttt gcggcgacac
     2521 gctgttttct ggtgggtgtg gtaggttgtt tgaagggaca gcatcacaaa tgtatcaatc
     2581 acttaataag ttaagtgcgt tacctgacga tacattggta tgttgtgctc atgaatatac
     2641 gttatcaaat atgaagtttg ctttgagtat tcttccgcac gatttgtcca taaatgatta
     2701 ttatcgtaaa gttaaggagt tacgggcaaa aaatcaaata acactacccg taattctgaa
     2761 aaatgagcgg caaattaatg tttttttaag aacggaagat attgatttaa ttaatgtaat
     2821 taatgaagaa acattattgc aacaacctga agagcgtttt gcatggttaa ggtcaaagaa
     2881 agataggttc tgataaaact ttcttgtcat cggctccgtt cgccgttatg atcggtcgtc
     2941 ttttaagcaa ctattgacac acacatgaag gcaaaagcga tattactcgc ctctgtcctg
     3001 ctcgtgggtt gccagagtac cggcaacgtt caacagcacg cacagagcct ttctgcagct
     3061 ggtcaagggg aagcagcaaa gtttacaagt caggcacgat ggatggacga tgggacgtct
     3121 atcgcgccag atggtgactt gtgggctttc attggcgacg agctaaagat gggaattccg
     3181 gaaaatgacc ggattcgcga acagaaacag aaatatttac gcaataagag ctatctccac
     3241 gatgtaactt tacgggcaga gccgtatatg tactggatag cagggcaagt taaaaaacgt
     3301 aacatgccta tggaactggt actactaccc atagtggaga gcgcttttga tcctcacgca
     3361 acgtctggcg ccaatgccgc aggcatctgg cagatcattc cgagcacggg gcgcaattat
     3421 ggtttgaaac agacccgcaa ttatgacgcg cgtcgcgatg ttgttgcttc aacaactgcc
     3481 gcgctgaaca tgatgcagcg tctgaacaag atgtttgacg gcgactggct tctgaccgta
     3541 gcggcttata acagcggcga aggtcgggtc atgaaggcaa ttaaaacgaa caaagcgcgt
     3601 gggaaatcca cggacttctg gtcgttaccg ttgccgcagg aaacgaagca gtacgtgcct
     3661 aaaatgctgg cattgagtga tattctcaaa aacagcaagc gttatggcgt acgtctgcca
     3721 acgaccgatg aaagccgtgc tctggcgcgt gtgcacctga gcagcccggt tgaaatggcg
     3781 aaggttgcag atatggcggg gatttccgtc agcaagctga agacattcaa cgctggcgta
     3841 aaaggctcca cgctgggcgc aagtggcccg cagtacgtga tggtgccaaa gaagcatgca
     3901 gatcaactgc gtgattctct cgcttcaggc gaaattgctg ctgtacagtc gacgctggtt
     3961 gccgacaata cgccgcttaa cagccgtgtt tacaccgtac gctctggcga cacgctttca
     4021 agcatcgctt cacgtctcgg cgtaagcacc aaagatttgc agcagtggaa caaactgcgc
     4081 ggatctaagc tgaagccagg ccaaagtttg acgattggtg caggcagtag cgcacagcgg
     4141 ttggcaaaca acagcgatag cattacgtat cgtgtgcgca aaggcgattc gctttcaagc
     4201 attgctaaac gccacggcgt gaacatcaaa gatgtgatgc gctggaacag tgacactgcg
     4261 aatctgcaac caggcgataa gctgacgttg tttgtgaaaa acaacaacat gccagattcc
     4321 tgacaaacca gataataaaa aaggcaccga ttcccccggt gcctttttta tttatgccgc
     4381 tttatgcgct tctaccatga tgatatcact ggtgaaagag ccatcagtct gcaaggaaaa
     4441 atacgttctc acctctgtcg atgcgctctg ttggtaaatg cgaatagcgt ctactaacgc
     4501 ttctggcgta cgcattctca cgacccatga agaaaattcc agcggtaact tatctgtaat
     4561 taaattatca actataagat tggcttcatt gattaacgtc aaccacgcac cgctggcgta
     4621 gtttcgtacg tgagaggtat cgcgtaatgc ttctaccgcc tgtaaccaga tgtcgcgcac
     4681 tgggtgaccc ggagacatta catccatcac aatcagccta ccgccaggtt tcaatatcct
     4741 attcacttct cgcagtgctg caccaacatc atgccagtga tgggcagaat aacggctgat
     4801 aacaatatca aatgcgttat cggcaaatgg cagacttgcg gcatatccct ggcgggtggt
     4861 gatatttttc agttgccggg cttcggcagc ttgtgccacg acatccagca tgtgggccga
     4921 taagtcatac gccaccaccg cgctcacgtt ttgcgcagcg ccaaacgttg gtctgccctg
     4981 tggcagacct gacatacctt atttatcagg cttgccggga ctgaattcaa cgagtagcgg
     5041 attgtgatcg gaagcgcgcg taaccagtac agaagcttca ctgacgttca gaccacggta
     5101 gaaaacaaaa tcgagcgggc gaccaaacgc ccgacggcgc tgatcatcgg taaaacgcac
     5161 ctggcgcagc gacatttccc gcgcaaagcg atataacgcg ttcatccttc tacggctcca
     5221 ggcattgaaa tctcccgcca taatgaccgg gccgctgtgg tgagctatct gatcaccaat
     5281 aggaagtaac tgcttactat agacatccac gcccagactg aagttgacgg cgtgtatatt
     5341 aaccaccatc aacaggcggg tgtcaggtaa tggatagacc gtcaccagtg ccgacttcgc
     5401 cagacgcaaa atgggttctc gttcacgtaa cgggcagcaa tacactggat gtgccgccga
     5461 aagggtcatt acgccagaag gatgttgtgg cagcacgaaa gcgggtacct gatcggcggc
     5521 aagatagtta gcggtcgcaa actgtactaa ctctggcgtt gtctgcgctt cctgcaataa
     5581 caccaggtgt gcatctttgc cgtagttctt taataccgac aaccattcag cgcgttgctg
     5641 tttgtatatg ttccacacca ggatccgaat acgctcttcg gtacttaacg gttccccaag
     5701 tggtaatgcc tggccgatgc tcgcaaaaga ccccggcggt aagatccttt ccgcaggttg
     5761 tccggcaaca tagcgcatgg cataggtgtt ttttcgcact tttgactttg aaacctctat
     5821 tacgtcaacc cttccgcact cgggagggtt ctactattat agggatttta gctcactctt
     5881 tcaacgagca attgtatatt gttatgtaag caagtgctta caccggtcag aattttgctc
     5941 attatggaga acattaaatc gcatgacata tcacgcatcc tgatggttta atgacaaata
     6001 aattcaaaat atctcttcta ttttgcaaca ggagcaaaaa tgaaagccac gtcggaagaa
     6061 ctcgccattt ttgtttcggt cgtcgaaagc ggcagcttta gccgggcagc ggaacaatta
     6121 gggcaagcaa actcagcggt aagccgggcg gtgaaaaagc tggagatgaa acttggcgtt
     6181 agcctgctta atcggaccac gcgacaactt agcctgacgg aagaaggcga gcgttatttt
     6241 cgtcgcgtac agtcaatttt gcaggagatg gcagcggcag aatcagaaat tatggagacg
     6301 cgtaatacac cgcgtggact gttacggatc gatgccgcaa ctccagtggt gctgcacttt
     6361 ctgatgccgt taattaagcc tttccgtgaa cgctatccgg aagtcacttt gtcgctagtc
     6421 tcctccgaaa cgattattaa tttgatcgaa agaaaagtgg atgtcgcgat acgcgctggt
     6481 acgttaacgg attccagctt acgtgccagg ccgttattta acagttatcg aaaaattatc
     6541 gcctcccccg attatatttc ccgctacggg aagccagaaa cgatcgacga tttaaagcaa
     6601 catgtttgcc tgggattcac tgaacccgct tccctcaata cctggccgat agcctgtagt
     6661 gatggacaat tacatgaggt gaaatacggt ttgtcatcca atagtgggga aacactgaaa
     6721 cagctttgcc tgagtggcaa cgggattgcg tgtttgtccg actacatgat cgacagagaa
     6781 atcgctcgcg gagaattggt ggagttaatg gcagataaag tgttgccagt ggaaatgcca
     6841 ttcagtgccg tctattacag cgaccgtgcg gtaagtacgc gcatccgggc ttttatcgat
     6901 ttccttagcg agcatgtaaa aacagctccc ggaggagctg tcagagaggc ttaatcccat
     6961 tcaggagcca gaccttccgg gctaaccagg cggtcgttgc aatccagtgc ggcgatcgct
     7021 tttttatctt cggcatcaag ctgtaaattt tgtgccttaa gattactttc caggttttta
     7081 cgtttagtag aagaaggaat tactgagtaa ccttccccca tagcccacgc cagaatcact
     7141 tgtgccggag tcgcattgtg tttagctgcg atacgagcaa taacctcatc tttcagggcc
     7201 ttaccatacg ccagcgtcat ataggaagta atatggatgc cgtgctgttt agcccaggca
     7261 accactttac ggttttgcag ataaggagag agttcaatct ggttagtagc gatgttttca
     7321 gcgccaacag cagcaatcgc cttttccatc aatgggatcg tgaagttgga aataccgatc
     7381 tcacgcgtca gcccttgttt tttggcttcc agcagcgcct gcataacccc ttcaacagag
     7441 acttcatcgt ttggtgacgg ccagtggatt agcgtcagat caacataatc ggtacgcaat
     7501 ttttgcaggc tctctttcag acttgggatc aatttgtctt tgctgagatt ttcaatccag
     7561 attttagtgg tgatgtagag ttcatgacgt ggcacgccac tttctgcaat cgcctgacct
     7621 actgcggctt cgttatcata gatttgtgcg gtatcaattg cgcgataacc aagttcaagc
     7681 gccgttttca cagatgaaat aacaacgtag tctttcaacc taaaccaaat gcagggatag
     7741 ccataatatg cctcttttaa tgctattttc gttaactgag gtgattatgg gcttcagact
     7801 gttgaggaaa aaagcgtaaa atgcagagga tttttgcgat tctggcaata atagatatac
     7861 agacgaaaaa aaacctcgag cgttaactcg aggcttctta ataagtggcg gaacggacgg
     7921 gactcgaacc cgcgaccccc tgcgtgacag gcaggtattc taaccgactg aactaccgct
     7981 ccaccgaatt cttttacaac caccggtttt atgaccggct tactgcttaa tttgatgcct
     8041 ggcagttccc tactctcgca tggggagacc ccacactacc atcggcgcta cggc
//
LOCUS       DAJVUK010000174         7937 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.174, whole genome shotgun sequence.
ACCESSION   DAJVUK010000174 DAJVUK010000000
VERSION     DAJVUK010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7937
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.174"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(109..381)
                     /locus_tag="OQQ57_003670"
     CDS             complement(109..381)
                     /locus_tag="OQQ57_003670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1958273.1"
                     /translation="MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESL
                     KGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS"
     gene            complement(393..623)
                     /locus_tag="OQQ57_003671"
     CDS             complement(393..623)
                     /locus_tag="OQQ57_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HCS1958274.1"
                     /translation="MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLK
                     RKPWIMPDEVDVVTVVKVIDTCPSGALKYRHK"
     gene            804..2435
                     /gene="dcuS"
                     /locus_tag="OQQ57_003672"
     CDS             804..2435
                     /gene="dcuS"
                     /locus_tag="OQQ57_003672"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HCS1958275.1"
                     /translation="MRHSLPYRMLLKRPMKLSTTVILMVSAVQFSVLLVVHLIYFSQI
                     SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTD
                     MQSLRYSHPEAQRIGQPFKGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQI
                     GVVVSGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV
                     VDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRL
                     DGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYSLKTANNYKEEIGSLLGKI
                     KSPVIAGFLISKINRATDLGHTLILNSESLLPDSGSEDQVATLITTLGNLIENALEAL
                     GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVK
                     QQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR"
     gene            2432..3151
                     /gene="dcuR"
                     /locus_tag="OQQ57_003673"
     CDS             2432..3151
                     /gene="dcuR"
                     /locus_tag="OQQ57_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HCS1958276.1"
                     /translation="MSNVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIF
                     NSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLT
                     PQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRIQAEHYSLLKQYCQ"
     gene            3722..5062
                     /gene="dcuB"
                     /locus_tag="OQQ57_003674"
     CDS             3722..5062
                     /gene="dcuB"
                     /locus_tag="OQQ57_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuB"
                     /protein_id="HCS1958277.1"
                     /translation="MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREY
                     VYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            5140..6786
                     /gene="fumB"
                     /locus_tag="OQQ57_003675"
     CDS             5140..6786
                     /gene="fumB"
                     /locus_tag="OQQ57_003675"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HCS1958278.1"
                     /translation="MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEP
                     EALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVL
                     PTCQDTGIAIIVGKKGQRVWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDTCHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK"
     gene            6909..7538
                     /locus_tag="OQQ57_003676"
     CDS             6909..7538
                     /locus_tag="OQQ57_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HCS1958279.1"
                     /translation="MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIV
                     VPLLLATARRYPLTPLLYTLIFLHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDK
                     LGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQ
                     GADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG"
     gene            complement(7677..>7937)
                     /locus_tag="OQQ57_003677"
     CDS             complement(7677..>7937)
                     /locus_tag="OQQ57_003677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HCS1958280.1"
                     /translation="AVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFR
                     FYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA"
BASE COUNT         1999 a         2051 c         1931 g         1956 t
ORIGIN      
        1 aaaaaacgcg ctctctgccc attctttgtg catcccccta cccttcagat gctctcctgc
       61 atcactccgc ggagagcatg aaaaatatcg tgactctgta ctctcccatc aactgcgaat
      121 atcatcatac tcccgcgttt tatcaaattc gtgtttcgca aatgggcata gtgggataat
      181 ttttcgtttt tcccgacgca ttttttccac gactttcgca accagctgtt taccaatccc
      241 ctgccctttc aggctttcat cgacatcggt atgttcgata atcgctaaat tctctccggt
      301 cggcacaaag acaatttcag cgatttgctt gccctgttcg tcattaatgt aaaatttatt
      361 gtggccttcg cgtatttcca ttttaccctc gcttatttat gacggtattt cagcgcgccg
      421 ctcgggcacg tatcaatcac tttaaccaca gtgacgacgt cgacttcatc cggcatgatc
      481 cacggctttc gtttgagatt aaataacttg ccgttgccac gtacgcaatt gccagaatgc
      541 tgacatatcg cagtgttgaa atagacatcg atcttttcgc cggtataaca gcgataaccc
      601 tcgtccagta gcgcctgatc catgactttc cctctctcat cagtatgatt atcgctataa
      661 gcatagccct ggaatcttca tacagcactg gcagtttccg ttgccagagt ctcttcccct
      721 atatagccaa tcattcttac gccctttgaa ttacccgcct catcagagat aatgcttaag
      781 aaatttgtca cacaaggaag ctgatgagac attcattgcc ctaccgcatg ttactcaaac
      841 gtccgatgaa attgagtacc acagtgatct taatggtcag cgcggtacag ttctcggtgc
      901 tattggtggt gcatctgatt tacttctcgc aaatcagtga tatgacacga gacgggctgg
      961 ccaacaaggc actggcagtg gcgcgtaccc tcgccgactc gccggaaatc cgtcagggct
     1021 tgcagaaaaa accgcaggag agcggaatcc aggccatcgc ggaagccgtg cgcaaacgca
     1081 acgatctgct gtttattgtc gttacggata tgcaaagtct tcgctactcg catcctgaag
     1141 cccagcgtat tggtcagcca tttaaaggtg atgacatcct taaagcgctg aatggcaaag
     1201 aaaatgtcgc tatcaatcgc ggttttctgg cgcaggcttt acgcgtattt acccccatct
     1261 acgatgaaaa tcataaacaa attggcgtgg tggtgagcgg ccttgagtta agccgcgtga
     1321 cccaacaaat caatgacagt cgctggagca ttatctggtc ggtattattt ggcatgctgg
     1381 tcggactgat tggcacctgc attctggtta aggtactgaa aaaaatcctt ttcggcctgg
     1441 aaccctacga aatctccacg ctgtttgagc agcgccaggc catgttgcag tctatcaaag
     1501 aaggcgtcgt tgccgtggac gatcgcggcg aggtcacgct gatcaacgat gccgcacaag
     1561 aattgctgaa ttaccgtaag tcgcaggacg atgagaaact gtcgacgcta agccactcat
     1621 ggtcacaggt ggtagatgtc tcggaagtgt tacgcgacgg tacgccgcgc cgcgacgaag
     1681 agattacgat taaagaccgg ctattactga tcaacaccgt tccggtgcgc agtaatggcg
     1741 ttatcatcgg tgccatttca accttcaggg acaaaactga agttcgtaaa ctgatgcagc
     1801 gactcgacgg tctggtcaac tatgctgatg cacttcgtga acgatcccac gaatttatga
     1861 ataaattgca tgtgattctc ggattattgc atctgaagag ttataagcag ttggaagatt
     1921 acagtctcaa aacagccaat aactataagg aagagattgg ctctctgctg ggtaagatca
     1981 aatctccggt tatcgctggt tttttaatca gcaagattaa ccgcgcgacc gatttaggcc
     2041 atacgctgat tttaaacagt gaaagcctgc tgccagacag cggcagtgag gaccaggtcg
     2101 cgacgctgat taccacattg ggaaatctga tagaaaacgc gctggaagca ttagggccgg
     2161 aacccggtgg cgaaattagc gtaacattgc actaccgtca cggctggctg cactgcgaag
     2221 ttaacgatga tggaccgggg atcgcacccg acaaaatcga tcacattttt gacaaaggtg
     2281 tctcgacaaa aggaagcgag cgaggcgtcg gtttagcact tgtcaaacaa caggtagaaa
     2341 atctcggcgg cagcatcgcc gtggaatcgg aacccgggat tttcacacaa ttttttgtcc
     2401 agataccctg ggacggggag aggtcaaaca gatgagcaat gtattaatta tcgatgacga
     2461 cgcaatggtc gcggagctga atcgccgata cgtagcacaa atcccaggct ttcaatgctg
     2521 tggaacagcc tcgacgctgg agaaagccaa agagattatc ttcaatagcg atacgcctat
     2581 cgacctgata ttgctcgata tctatatgca aaaagagaac gggctcgatt tactgcctgt
     2641 cctgcataac gcgcgttgca aaagtgatgt gattgtcatc tcctccgcag ccgatgcggc
     2701 aaccattaaa gattcgctgc attacggtgt cgtggattac ctgatcaaac ccttccaggc
     2761 ttcccgcttt gaagaggcgc tcaccggctg gcggcaaaag aaaatggcgc tggaaaaaca
     2821 tcagtattat gaccaggccg agcttgatca gctaatccac ggcagcagct ccaacgaaca
     2881 ggatcctcgt cgcttgccaa aaggcttaac gccgcagacg ttacgcacgc tgtgccagtg
     2941 gattgacgcg catcaggact atgagttttc aaccgacgag ctggctaacg aggttaacat
     3001 ctcgcgtgtt tcctgccgta aatacctcat ctggctggtc aactgccaca tcttgttcac
     3061 cagtatccat tatggcgtca cggggcgtcc ggtttaccgt taccgtattc aggcagaaca
     3121 ctactcacta ctgaaacaat attgccaata acggatcgct ggttatctgt aagtaataat
     3181 tattaccgta atgcaaaata cccctggcac aagttacatc cttcatcagt aaaacttgtg
     3241 ccagatcaaa tataattatc cctccatcat cgctaaaaat taatatctct tcaggtgaac
     3301 ggtgttttta atttcaaaac gctaacaaaa gttaattaac tattatgtca cccgcattat
     3361 gtgtattttc acccacaaat gggtagataa gattaatctt taaacctaat gatatctgcc
     3421 ctgagaacaa aaaatagacc gataaatatc aataagataa cagcaaacaa aacattaaca
     3481 tctgcgcagt acaaactata aacccatcgc cagagagttt ttctctctga aaaagccgct
     3541 tatcacagtg cataaatttg ccgctgcttt aatcagccaa tatttactgt gaggtatttg
     3601 ctaaagccgg taacgaccaa acggatattt agtcaggctc tgaaaacagt tcatacaaaa
     3661 cagaacgtga ctgtgatcta ttcagcaaaa atttaaatag gattatcgcg agggttcaca
     3721 catgttattt actatccaac ttatcataat actgatatgt ctgttttatg gtgccagaaa
     3781 gggtggtatc gcgctgggtt tattaggcgg tatcggtctg gtcattctgg tcttcgtctt
     3841 ccaccttcag ccaggtaaac caccggttga tgtcatgctg gttatcattg cggtggtggc
     3901 ggcatcggcg accttgcaag cttcgggcgg tcttgatgtc atgctgcaaa ttgccgagaa
     3961 gttgctgcgc cgcaacccga aatatgtctc aattgtcgcg ccgtttgtga cctgtacgct
     4021 gaccattctt tgcggtacgg gtcatgtggt ttacaccatt ctgccgatca tctacgacgt
     4081 cgccattaag aacaacatcc gtccggaacg tccgatggcg gcaagttcta tcggtgcaca
     4141 gatggggatt atcgccagtc cggtgtcggt tgcggtcgtg tctctggttg cgatgctggg
     4201 taatgtcacc tttgatggtc gccatcttga gttcctcgac ctgctggcaa tcaccattcc
     4261 atcgacgtta atcggtatcc tggcgatcgg tatcttcagc tggttccgtg gtaaagatct
     4321 ggataaagac gaagagttcc agaaattcat ctccgtaccg gaaaaccgtg agtatgttta
     4381 cggtgatacc gcgacgctgc tggataaaaa actgccgaaa agcaactggc tggcaatgtg
     4441 gattttcctc ggggcaatcg ctgtagtcgc ccttcttggt gctgattcgg acctgcgtcc
     4501 atccttcggc ggcaaaccgc tgtcgatggt actggttatt cagatgttta tgctgctgac
     4561 cggggcgctg attattatcc tgaccaaaac caatcccgcg tctatctcaa aaaacgaagt
     4621 cttccgttcc ggtatgatcg ccatcgtggc ggtgtacggt atcgcatgga tggcagaaac
     4681 catgttcggt gcgcatatgt ctgaaattca gggcgtactg ggtgaaatgg tgaaagagta
     4741 tccgtgggcc tatgccattg ttctgctgct ggtttccaag tttgtaaact ctcaggctgc
     4801 ggcgctggcg gcgattgttc cggtcgcgtt ggcgatcggc gttgatccgg catacatcgt
     4861 ggcttcagca ccggcttgct acggttatta catcctgccg acttatccga gcgatctggc
     4921 agcgattcag tttgaccgtt ccggcaccac ccacatcggt cgcttcgtca tcaaccacag
     4981 ctttattctg ccggggttga ttggtgtgag cgtatcgtgc gtcttcggct ggatcttcgc
     5041 cgcgatgtac gggttcttat aaatgcactt tgcgtgccgc ccgtgactac gcggcacgcc
     5101 attttcgaat aacaaataca gagttacagg ctggaagcta tgtcaaacaa accctttatc
     5161 taccaggcac ctttcccgat ggggaaagac aataccgaat actatctact cacttccgat
     5221 tacgttagcg ttgccgactt cgacggcgaa accatcctga aagtggaacc agaagccctg
     5281 accctgctgg cgcagcaagc ctttcacgac gcttctttta tgctccgccc ggcacaccag
     5341 aaacaggttg cggctattct tcacgatcca gaagccagcg aaaacgacaa gtacgtggcg
     5401 ctgcaattct taagaaattc cgaaatcgcc gccaaaggcg tgctgccgac ctgccaggat
     5461 accggcatcg cgatcatcgt cggtaaaaaa ggccagcgcg tgtggaccgg cggcggtgat
     5521 gaagaagcgc tgtcgaaagg cgtctataac acctatatcg aagataacct gcgctattca
     5581 cagaatgcgg cgctggacat gtacaaagag gtcaacaccg gcactaacct gcctgcgcaa
     5641 atcgacctgt acgcggtaga tggcgatgag tacaaattcc tttgcgttgc gaaaggcggc
     5701 ggctctgcca acaaaacgta tctctaccag gaaaccaaag ccctgctgac tcccggcaaa
     5761 ctgaaaaact tcctcgtcga gaaaatgcgt accctcggta ctgcagcctg cccgccgtac
     5821 catatcgcgt ttgtgattgg cggtacgtct gcggaaacca acctgaaaac cgtcaagtta
     5881 gcaagcgctc actattacga tgaactgccg acggaaggga acgaacatgg tcaggcgttc
     5941 cgcgatgtcc agctggaaca ggaactgctg gaagaggccc agaaactcgg tcttggcgca
     6001 cagtttggcg gtaaatactt cgcgcacgac attcgcgtta tccgtctgcc acgtcacggc
     6061 gcatcctgcc cggtcggcat gggcgtctcc tgctccgctg accgtaacat taaagcgaaa
     6121 atcaaccgcg aaggtatctg gatcgaaaaa ctggaacaca acccaggcca gtacattcca
     6181 caagaactgc gccaggccgg tgaaggcgaa gcggtgaaag ttgaccttaa ccgcccgatg
     6241 aaagagatcc tcgcccagct ttcgcaatac ccggtatcca ctcgtttgtc gctcaccggc
     6301 accattatcg tgggccgaga tattgcacac gccaagctga aagagctgat tgacgccggt
     6361 aaagaacttc cgcagtacat caaagatcac ccgatctact acgcgggtcc ggcgaaaacc
     6421 cctgccggtt atccatcagg ttcacttggc ccaaccaccg caggccgtat ggactcctac
     6481 gtggatctgc tgcaatccca cggcggcagc atgatcatgc tggcgaaagg taaccgcagt
     6541 cagcaggtta ccgacacgtg tcataaacac ggcggcttct acctcggtag catcggcggt
     6601 ccggcggcgg tactggcgca gcagagcatc aagcatctgg aatgcgtcgc ttatccggag
     6661 ctgggtatgg aagctatctg gaaaatcgaa gtagaagatt tcccggcgtt tatcttggtc
     6721 gatgacaaag gtaacgactt cttccagcaa atcgtcaaca aacagtgcgc gaactgcact
     6781 aagtaacctc ttcggcccag cgcctggcag catgctgcca ggtgatcccc ctgggccacc
     6841 tcttttgcga ttgtaatttc acgcttgctg gtgaatagtc agtattttcc ctgatttgcg
     6901 aactcaccat gacccgcaca ctcaagccgt taattcttaa caccggcgca ctggcgctaa
     6961 cattaatcct gatttatacc ggcatttcgg cccatgacaa actcacctgg ctgatggaag
     7021 tgacaccggt gattattgtc gtgccgctac tgcttgccac cgccagacgt tatccgttaa
     7081 cgccgctgct ctatacgctc attttccttc acgccatcat cctgatggtc ggcggacaat
     7141 acacctacgc gaaagtcccc gttggttttg aggtgcagga atggctgggg ttgagccgta
     7201 atccgtatga caagctgggg cactttttcc aggggctggt gcctgcactg gtggcacgag
     7261 aaattctcgt tcgcgggatg tacgtgcgcg gacgtaaaat ggtggcgttc ctagtctgct
     7321 gcgtggcgct ggcgataagc gcaatgtatg aattaatcga gtggtgggcg gcgctggcaa
     7381 tgggtcaggg agcggatgat tttctcggca cccagggcga ccagtgggac acgcaatccg
     7441 atatgttctg cgcgctgctt ggcgcattaa cgacggtgat attcctcgct cgctttcatt
     7501 gccgccagct acggcgcttt ggcttgataa ccggataaca acgtgcgctt tgttgatgcc
     7561 ggatgcagcg tgaattcctt atccggtcta caaaatttgc aaatccaaag cattacatta
     7621 agacgtggcc tgataaacat atcgcatcag gccattttcg ttagctattg tccacgtcag
     7681 gctttcacat cactcactgc accgaccgga atatcagcat gaacaggctc gggcggtact
     7741 ttgcgatatt tatccagcag atggatctgg atcctgcgca gcgtgtcacc attgaggcga
     7801 tagaaacgga agtagagaat cagcgttacc atgaaaaaca gagttggtag agcaatcata
     7861 ataaactgca tacctaatag ggcttgcgta gactgttcaa cattcggtac atagccaatc
     7921 atccctaaca caaccgc
//
LOCUS       DAJVUK010000175         7901 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.175, whole genome shotgun sequence.
ACCESSION   DAJVUK010000175 DAJVUK010000000
VERSION     DAJVUK010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7901
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.175"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1473
                     /locus_tag="OQQ57_003678"
     CDS             <1..1473
                     /locus_tag="OQQ57_003678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958281.1"
                     /translation="VVLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKT
                     CRQYVQQLSQALWLSGISQPLIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFH
                     ARASHYHAGECLRQLAALNSRLNCAQEMARRDSVGEVPPVPWRTVVGSGIAGEAKLDH
                     LRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQA
                     GALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREY
                     LRQRPPACIRPLNQVDNLFILPVAECISLGWDSGRQTLDAQVISGEGEDNLLTLSLPA
                     SACSPFAVERMAALLQQTDDPVSLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETAP
                     VAPLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAISQAELLANDLTAVGF
                     YRLAHVLVQFRNTESEARVEAMNNGVLLCEQLFPMLQQQG"
     gene            1598..2059
                     /locus_tag="OQQ57_003679"
     CDS             1598..2059
                     /locus_tag="OQQ57_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HCS1958282.1"
                     /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
                     YVYKGDKVLKQSSETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYA
                     QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
     gene            complement(2100..2570)
                     /locus_tag="OQQ57_003680"
     CDS             complement(2100..2570)
                     /locus_tag="OQQ57_003680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HCS1958283.1"
                     /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(2617..3336)
                     /gene="yehT"
                     /locus_tag="OQQ57_003681"
     CDS             complement(2617..3336)
                     /gene="yehT"
                     /locus_tag="OQQ57_003681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HCS1958284.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            complement(3333..5018)
                     /gene="btsS"
                     /locus_tag="OQQ57_003682"
     CDS             complement(3333..5018)
                     /gene="btsS"
                     /locus_tag="OQQ57_003682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HCS1958285.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLQLPWRDEA"
     gene            5240..5305
                     /locus_tag="OQQ57_003683"
                     /pseudo
     CDS             5240..5305
                     /locus_tag="OQQ57_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
     gene            5533..5781
                     /locus_tag="OQQ57_003684"
     CDS             5533..5781
                     /locus_tag="OQQ57_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HCS1958286.1"
                     /translation="MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(5897..6166)
                     /locus_tag="OQQ57_003685"
     CDS             complement(5897..6166)
                     /locus_tag="OQQ57_003685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1958287.1"
                     /translation="MLLQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQD
                     AVDLEIATEEENSLLEAWKKYRVLLNCVDTSTAPDIEWPEEPDTM"
     gene            6223..6891
                     /locus_tag="OQQ57_003686"
     CDS             6223..6891
                     /locus_tag="OQQ57_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCS1958288.1"
                     /translation="MVKLMKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEH
                     LLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHK
                     ISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATI
                     LGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSA
                     SGKK"
     gene            7207..>7901
                     /locus_tag="OQQ57_003687"
     CDS             7207..>7901
                     /locus_tag="OQQ57_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1958289.1"
                     /translation="MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGE
                     NRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALK
                     ELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS
                     LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQL
                     SPRIMQTLLQQTA"
BASE COUNT         2141 a         1935 c         1787 g         2038 t
ORIGIN      
        1 gtcgtactgg cagtacaggc ctttgtccag gcaaaagcgc agcaagcgga attgactcat
       61 ttaatctggc agatgcgcag cgaacacgtc acatcatctg acgatccgtt tgccagcgaa
      121 gaaggcaaaa cgtgtcgtca atatgttcaa caactaagcc aggcattatg gctgagcggc
      181 atcagccagc cgcttattca ctacgaggcc gctttcagcc gcgcgcagca agcagcggaa
      241 cgctgcagct ggcgatgggt gagtgaatcg ctacggcaac tgcgcgccag cgttgatgcc
      301 ttccacgccc gcgccagcca ctatcatgcc ggagaatgct tacgtcagct tgcggcatta
      361 aacagtcgat taaactgcgc acaagagatg gcccggcgcg acagtgttgg tgaagttcct
      421 cctgtgccgt ggcgcacggt cgttggctct ggcattgccg gagaagcaaa gcttgatcat
      481 ctgcggctgg tgtctttagg tatgcgttgc tggcaggata ttgagcatta tggtttacgc
      541 atctggttta ccgatcccga caccggcagt attttgcatc tttcgcgtag ttggccgcga
      601 agtgaacagg aaaactcacc ggcagctacg cgtcggctgt ttagttttca ggctggcgca
      661 ctggcgggtg ggcaaattgt ttcacaagca gcaaaacgca gtgccgatgg cgagctgctg
      721 ttagctaccc gcaaccgctt aagcagcgtt gtgccgctgt cgccagacgc ctggcaaatg
      781 ttgagcgcgc cgttacgcca gccgggcatt gtggctttgc gggaatattt acgccagcgt
      841 ccccccgcct gcatacggcc tcttaatcag gtggataact tatttattct gccggtcgct
      901 gagtgtattt cactcggttg ggacagcggc cgccagacgc tggatgcgca ggtaatcagc
      961 ggcgaaggtg aagataatct gctgacgtta tcccttccgg catctgcctg ttctcctttt
     1021 gccgttgaac gcatggcggc gcttttgcaa caaacagacg accccgtgag tctggtttct
     1081 ggctttgtca gctttgtaga ggggcaattg acactggaac cacgggtgat gatgacaaaa
     1141 acccgtgcct gggcgctgga cgcggaaact gcgcctgtgg caccgctacc ttctgccagc
     1201 gttttgcctg tgccgtctac cgctcatcag ttgctgatgc gctgccaggc gttacttatt
     1261 caactgctcc ataacggctg gcgctatcag gaacagagcg ctattagtca ggcagagttg
     1321 ctggcgaatg acctcaccgc ggtgggtttt tatcggctgg cacatgtgtt ggtacaattt
     1381 cgtaatacag aaagcgaggc acgggtagaa gcaatgaata acggtgtttt gctttgcgaa
     1441 caattattcc ccatgcttca gcaacaagga tgaaatagtg ctttttacta agagttctac
     1501 tccagttccg gactgctcac gccacggtat taggcatatc ctatatagcc cctggtgaga
     1561 gtcaccagtt tcttgattaa ataaaatgga gttttacatg aaggctttca ataagctgtt
     1621 ttccctcgtt gttgcatctg ttctggtttt ctctcttgct ggctgcggtg acaaagaaga
     1681 atcgaagaaa ttcagcgcca atctgaacgg cactgaaatt gccattacct atgtctacaa
     1741 aggtgacaag gtgcttaagc aatcttctga aaccaaaatt caatttgcct ccattagtgc
     1801 aaccaccaaa gaagatgctg ccaagacact tgagccgtta agcgccaaat acaaaaacat
     1861 cgcgggtgtt gaagaaaaat taacctatac cgatacctac gcgcaggaaa acgtgactat
     1921 cgatatggaa aaagtggatt ttaaagccct gcagggtatt tcaggaatca acgtttctgc
     1981 tgaagatgcc aaaaaaggta tcactatggc gcaaatggaa ctggtgatga aagccgctgg
     2041 ttttaaagaa gtgaaataat ctgtcggcgg ccatgtttcg tatggccgcc atacccgtct
     2101 tagcttttct tcacatgctg gcgcgctgcc agtccacgca gaaaataacg taaaaattga
     2161 tcgccgcatt cgcggaagtt tttatgatcc ggtgcgcgca tcatcgctgt aatttccggc
     2221 atcgaaacgc ggaactgctg ttcggtgagg atagccagaa tgtcatcggt tttcagcgaa
     2281 aacgcgatgc gtaatttttt cagcacgatg ttgttattaa tgcgacgttc cggctccagt
     2341 gccggagcag actcatcctt gccgcgtttt tcataaatca ggccattgag gaatgacgac
     2401 aaaacaatgt ccggacaacg ctgaaaaccc tcttcgtctt ctttacgtag ccagacggcg
     2461 atctgttccg cggtggcttc gacattaccc agcgccagaa tacgcaccag gtcattatta
     2521 ttggctttca aaatgtagcg cacgctgcgc agaatatcgt tacttagcat gaggccttca
     2581 ggtgttgatg aggcaaaaag ccattttagc agtcttttac aggccaatcg cctcttttaa
     2641 gcttttcaga taacggcggc tgaccggcac ggttaagcca ttacgcaaaa tcaactcggc
     2701 ctggccgtta tcttccagac gaatctcctg taaatgcgcg aggttaacca gatactgacg
     2761 atggcagcgc agtagtggtg tacgactttc cagggtacgt aatgtcaatt cggtaaagcc
     2821 ctctttccct tcgtggctgg taacgtagac accgctcatc cgactgctga caaatgccac
     2881 atctttcatt tgcagcaaat aaatccgact atgccccgta caagggataa atttcagcgc
     2941 ctgttgattt tccggtaaca gcgaaacatc ctgcttgctg cgctcctgac gcaatcgcgc
     3001 cagcgttttc tccagtcgcg cttcatcaat tggcttcagc agataatcaa aggcatgttc
     3061 ttcaaaggct ttaatagcgt attcgtcaaa cgcagtgaga aaaacaatat acgggcgatg
     3121 ttccgggtca agcatcccca ccatttccag accactgatg cgcggcatct ggatatcgag
     3181 aaacagcaca tccgggcgca gtttatgcac cgcgccgatc ccttccacgg cgtttgaaca
     3241 ctctccaacg atttcaatat cgctctgctc ctgcaaaaat acacgcaggt tctcccgtgc
     3301 taacggttca tcatcgacaa ttaagacttt aatcatgcct cgtccctcca tggtagttgt
     3361 aacgttattc gggtgtaact atcaggctca caggcgacgc ttattccata gtcatcgcca
     3421 aaccgttcac gtaaacgctt atccaccaga ttcatcccca gcccactggc attggttacc
     3481 ggttgataca aaccggcatt gtcttcgatc tccagcatca aatgttgccc ctcacgtcgg
     3541 gcgctgattg ccactcgccc tgtatccagc agttgtgatg tcccatgttt aatggcgttt
     3601 tccactatcg gttgcagggt aaacgcgggc aattgctgct gggataattc ttgcggaata
     3661 gcaatgttga cctgcaaccg cgactggaag cgcgcctttt caatttgcag ataagcgttc
     3721 acatgttcaa tttcgtcggc gagagtaaca aactccgaag gccgctttaa gtttttgcgg
     3781 aaaaaagtgg aaagatactg caccagctgg ctggcctgtt cgctgtcgcg gcggatcacc
     3841 gctttaatgg tgttaagcgc attaaacaaa aaatgaggat tcacctgggc gtgaagcagt
     3901 ttgatttctg actgggtgag catcgctttt tgccgctcat attgcccggc aagaatctgc
     3961 gccgaaagca gttgcgcaat cccctcgccc agcgtgcggt ttattgaact gaataaacgg
     4021 tttttggctt catacaattt gatggtgccc atcacccgct gattttcacc acgcaacgga
     4081 attaccagcg tcgaccccag tttgcattgc ggatgcaaag agcaacgata aggtacttcg
     4141 ttgccatcag cgtagaccac ttcaccggtt tcaatcgctt ttaaggtgta agtcgaagaa
     4201 atcggtttgc cgggtaaatg gtggtcgtca ccaattccag taaaggccag caatttctct
     4261 cgatcggtaa tcgcgactgc accaatatcc agctcctgat acagcacctg tgccactttc
     4321 atgctgttca cttcgttaaa cccctggcgc aaaatgcctt ccgtcgaggc agccactttc
     4381 agcgcagtgg cagaaaaagc cgaagtgtat ttttcaaaca tcgcgcgttt atcgagcaat
     4441 atacgcataa acagcgccgc gccgacggta ttggtgacca tcattggtgc agcaatatta
     4501 ctcaccagac gcaccgcatc ttcataaggt cgggcgatcg ccaggatgat caacatttgc
     4561 accatttcag cgacgaacgt gacggcaccg gcggtaatgg ggttaaagac tttatcagta
     4621 cgcccgcgac gaatcaggat gctgtgtacc aggccgccga gcaatccttc aacgatggtc
     4681 gagatcatgc aacttagcgc ggtcatgccc cccatcgaat atcgatgtaa cccgccggtc
     4741 aggccaacca gcccaccgac gaccggaccg ccgagtaagc cgcccattac cgcgcctatc
     4801 gcacgggtat tggcaataga atcgtcaatg tgcaacccaa accaggtgcc catgatgcag
     4861 aagatggaaa agacgatgta gcagagaaat ttatgcggca gacgaaccgt gacctgcatt
     4921 aacggtatga ataatggcgt tttactcatt aaccacgcaa tgactaaaaa aacgcacatc
     4981 tgctgaagca gcagcaacac cagattaaaa tcgtacatac ccgcaaacca cacttccctt
     5041 taaaacgcgt aacatacatt gcctgcgttt aactttcttt gaactcttgc agaaaaatga
     5101 gaattcgtga gtacgatcac tcaaaatcgc ctggcaaaaa taaaatcacc ctatagatgc
     5161 acaaaaaacg ggcaaaacta cctggttcgc aaaactgcgt ctaaagttaa accgggacct
     5221 cgcgagcaag ggtgagacga tggcgcttta cacaattggt gaagtggcgt tgctttgtga
     5281 tattaaccct gtcacgttac gcgcgtgacg caacatttta aaaaatcgac gaagatcgtc
     5341 caggagcgcc gtttttcaag ggttggatag atgattcgtt taccatgtcg acgaacttcg
     5401 acgaatttcg ccgataaaaa gtgtcccata catgccccat tgatgcccca taaacaatat
     5461 cagaaattga tactggttat ccatacagat aaaaataaca cctgtacata actacagtta
     5521 caggagggtg ttatgcgtgt tgagatctgt atcgctaaag aaaaaatcac taaaatgcca
     5581 aacggtgctg tggatgcgtt aaaggaagaa ttaacccgac gcatcagtaa acgttatgac
     5641 gatgtagagg tgatcgtaaa agccaccagc aacgatggcc tttctgttac acgcaccgca
     5701 gataaggatt ctgcaaaaac atttgttcag gagactctga aagatacctg ggagtctgct
     5761 gacgagtggt ttgttcacta ataaacacgt aaaatcggta acggctggaa atcattcaat
     5821 actcgcacta tcgaaagttt accagccaac cgcagcacgt cctgcatacg tcgtgtctgc
     5881 ggtttttctt tttcgcttac attgtgtctg gttcttccgg ccactcaata tcaggtgcag
     5941 ttgatgtatc aacacagttc agcaacaccc gatacttctt ccaggcttcc agcaacgagt
     6001 tttcttcctc cgttgcgatc tccagatcta cagcatcctg aagtggcgca atatgctcac
     6061 tgaattcctg gatgtagaac tgtgtggtga cggtcttcca gccattcggc tcctgctgta
     6121 tcgaagcata ccaggctatt tcaatatcgc tatgctgcag cagcatttaa ccccttgtaa
     6181 ttcatcgcca taattgattt aattcacaaa taaaactata atatggtgaa attaatgaaa
     6241 aaaaacacag atgatggggc taaaatttac acaccaatta ccctaaagct ttatgactgg
     6301 tgggttttgg gagtatcaaa tcggcttgca tggggatgtc ctacaaagga acaccttctt
     6361 ccacactttc tggaacattt aggtaacaac catctggata ttggtgttgg aactgggttt
     6421 taccttactc acgtacctga gagtagtctg atatctttaa tggatttgaa cgaagctagc
     6481 ctgaacgcgg catctacaag ggctggggaa tcaaaaatta aacataaaat tagccatgat
     6541 gtttttgaaa cttatcccgc ggcgttacat ggtcaatttg attccatttc catgttttac
     6601 cttcttcact gcctgcctgg aaatatatct acaaaaagct gtgtaatacg caatgcggcg
     6661 caggccttaa ctgatgatgg aactctatac ggagccacaa ttcttggcga tggagttgtg
     6721 cacaatagct tcggtcaaaa actgatgcgc atttacaatc agaaaggcat cttttcaaac
     6781 acaaaagatt ccgaagaagg cttaacacat atactctcag agcatttcga gaatgttaaa
     6841 accaaggttc aaggtactgt agtaatgttt tctgcttcag ggaaaaaata gcatccaacc
     6901 gcagcacgtt cttgcttaag acgtgctacg gtttccttta cgatttgggg ttgcgacttt
     6961 acctctattg ataatgcatt ccggcagaac attcaaatat gaatgtacga tatttaacta
     7021 accgaaaaac aaaatatagc acaggcgaga catttaccat ctaagaaaat agtatcgttt
     7081 ttttacagtt aaatcaacat cacttcctta aaatgaaaac aataaatttc aatcctgaaa
     7141 cattttattt tagcttatta tttcccagta tcacatttta tcaggatatc cttctgcgag
     7201 gttattatgc ttcctgtaaa taatcccccc ctatccactg gaaacgtctc tttttacaga
     7261 actacatcaa tcgacaatgt tcacaataat tatctctccg aatgggttga atggactaaa
     7321 aacagcattt ccggagaaaa cagggaaact gcttttaccc ggctccaatt atgtctggaa
     7381 aacagtgaaa catcgttgga cttatcttgt ttaggtctca gatctctacc acgattgcct
     7441 gacaatcttg atgaaattaa tgtaagcaat aaccaactat caatgctccc cgagctacca
     7501 agggcattga aagaactgaa tgcaagcagt aatcaattat ctgcacttcc tgaattacca
     7561 gtgtcgctgg aatatataaa tgtgagtgat aaccatttgt tcgcacttcc tgaattacct
     7621 gcgtcactag aatatattaa cgtaagtgac aatcacctgt ctgtacttcc gaggttacca
     7681 atgtcattgg aattacttga tgcagccaga aatgctttgg aagtaatacc agattttcca
     7741 gaaagagatg atcatattat aagaatattc tggcttaatc agaaccggat cacggcaatt
     7801 ccggaaagca tacttggcct cagttctgat agcgttgtca atcttagaga aaatcaacta
     7861 tctcccagaa taatgcaaac tttgttacaa caaaccgccc a
//
LOCUS       DAJVUK010000176         7810 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.176, whole genome shotgun sequence.
ACCESSION   DAJVUK010000176 DAJVUK010000000
VERSION     DAJVUK010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7810
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.176"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            260..403
                     /locus_tag="OQQ57_003688"
     CDS             260..403
                     /locus_tag="OQQ57_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HCS1958290.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            416..625
                     /gene="cspE"
                     /locus_tag="OQQ57_003689"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             416..625
                     /gene="cspE"
                     /locus_tag="OQQ57_003689"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HCS1958291.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            791..1600
                     /gene="rlmA"
                     /locus_tag="OQQ57_003690"
     CDS             791..1600
                     /gene="rlmA"
                     /locus_tag="OQQ57_003690"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HCS1958292.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(1597..2163)
                     /gene="mntP"
                     /locus_tag="OQQ57_003691"
     CDS             complement(1597..2163)
                     /gene="mntP"
                     /locus_tag="OQQ57_003691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HCS1958293.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
     gene            complement(2591..3049)
                     /locus_tag="OQQ57_003692"
     CDS             complement(2591..3049)
                     /locus_tag="OQQ57_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HCS1958294.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDNLERIYKLIVLTQ"
     gene            complement(3104..3955)
                     /gene="manZ"
                     /locus_tag="OQQ57_003693"
     CDS             complement(3104..3955)
                     /gene="manZ"
                     /locus_tag="OQQ57_003693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HCS1958295.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR
                     ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            complement(3968..4768)
                     /gene="manY"
                     /locus_tag="OQQ57_003694"
     CDS             complement(3968..4768)
                     /gene="manY"
                     /locus_tag="OQQ57_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIC"
                     /protein_id="HCS1958296.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            complement(4831..5802)
                     /gene="manX"
                     /locus_tag="OQQ57_003695"
     CDS             complement(4831..5802)
                     /gene="manX"
                     /locus_tag="OQQ57_003695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HCS1958297.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            6265..>7810
                     /gene="yoaE"
                     /locus_tag="OQQ57_003696"
     CDS             6265..>7810
                     /gene="yoaE"
                     /locus_tag="OQQ57_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HCS1958298.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPIPE
                     GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
                     CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
                     FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQA
                     LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKE
                     QPAHDED"
BASE COUNT         1984 a         1910 c         1939 g         1977 t
ORIGIN      
        1 taataacttc tcccactggc ctggaacaac tgaacttatt gaactatgtt agaaaatacg
       61 ccagtttaag tatctgcctg aactggcaag gttaagcaca atgatatatc ggcgcgtatt
      121 ccgttgcata agtgtgcaaa aaaagtggaa gacgtatcga gatttgtgcg tctgatcgag
      181 acatgtttaa aaatggcttg ccataattaa cgttgtatgt gataacagat ttcgggttaa
      241 acgaggtaca gttctgttta tgtgtggcat tttcagtaaa gaagtcctga gtaaacacgt
      301 tgatgttgaa taccgcttct ctgccgagcc ttatattggt gcctcatgca gtaatgtgtc
      361 agttttatct atgttatgcc tgcgggcgaa gaaaacaatc taaggaattt ttcaaatggc
      421 aaagattaaa ggtcaggtta agtggttcaa cgagtctaaa ggttttggct tcattactcc
      481 ggctgatggc agcaaagacg tgttcgtaca cttctccgct atccagggta atggcttcaa
      541 aactctggct gaaggtcaga acgttgagtt cgaaattcag gacggccaga aaggtccggc
      601 agctgttaac gtaacagcta tctgatcgaa tccactgatc tgaagtgtga atacgcttca
      661 atctcgctat aaagcctcgt cgaatgcgag gctttttact atgctttatc ttcgctcctg
      721 gcgttcggat atttgcccgc cgcgtgattc gcgttacact tgcggccttt agtatcctgc
      781 cggagttgtc atgtcttttt cctgtccact ttgccatcag cctctttcgc gtgaaaaaaa
      841 cagctatatc tgtccccagc gacatcagtt tgatatggcg aaagaagggt atgtcaatct
      901 gctgcccgtt cagcataaac ggtctcgtga tccgggcgac agcgcggaaa tgatgcaagc
      961 acgccgcgca ttcttagatg ccggacatta tcagccgctg cgtgatgcaa ttgtcgccca
     1021 actgagggaa cggcttgatg ataaggccac ggcggtgctg gatattggct gtggtgaagg
     1081 gtattacaca cacgcatttg ccgatgcgtt gcccgaaatc accacgtttg gtctggatgt
     1141 ttcgaaggta gcgataaaag cggcggcgaa acgctatccg caggtcactt tttgtgtcgc
     1201 ttccagccac cgtttgccgt tttccgatac cagtatggac gccataatac gtatttacgc
     1261 gccgtgtaaa gcagaagaat tagcacgagt agtgaagccc ggcggctggg tcattactgc
     1321 cacgccggga ccgcgacatt tgatggagct gaaggggctg atttacaatg aagtacatct
     1381 tcatgcacct catgcagaac aactggaagg ttttacatta cagcagagtg cggagttgtg
     1441 ttatccgatg cgtcttcgcg gtgatgaagc tgtcgcatta ttgcagatga cgccgtttgc
     1501 ctggcgtgcg aagccagaag tctggcaaac actggcagca aaagaagtgt tcgactgcca
     1561 gacggacttt aatattcacc tctggcagcg ttcttattaa ccgtggaagt gcgtccagag
     1621 gatctggacg ccgatgccga tcagtaccag cccgccgaga atttccgctt ttttcccaat
     1681 aattgagccg ataaagcgac caaccatcat ccctaatgtt gacataatca aggttgcaca
     1741 accaatggcc aatgcggtcg cgataatgtt gacctgcagg aaagcaagac caacacccac
     1801 agccatggca tccaggctgg tggcaatcgc ggtggttacc agtagccaga aaccgtgtcg
     1861 acggcgcggc tcttcatctt catcatctgc gccacgaaaa ccctcaataa tcattcgccc
     1921 gccgaggaat atcagcagca caaacgcaat ccagtggttc cattcaagga caaaccggct
     1981 ggctaacatg cccattcccc agccgatcag cggcgtcagg gtttcgacgg caccaaaaat
     2041 aaggccggtt cgcaatgctt cagaaaattt cggtttatgg agggtggcac ctttaccgat
     2101 tgatgcagca aatgcatcca tcgacatacc aaacgcaaga agaacagtag cagtgatatt
     2161 catgacaatg tcctgaccgg ggtatccata aaacacatca tcgcccccag caaacatgca
     2221 tacatgaaca acaagccgtg atggtttttg cgttcatgca ggcatagcga ttgatgtgca
     2281 tatggtctcg cctgactgaa agtattcagt ccgtacgtgc cacgttttgc aacgagtatg
     2341 ttgacacgta catttccgga atctggaaat cggctactcc ccaaatgagg gcgcaacctt
     2401 aacatatttt gagaatataa aacaactgtt ggaatatatt atttcattgc tttattgata
     2461 acgaattcat ttagatttat atatcaatga aacgttaaaa taaataacaa ataagggaag
     2521 aggtaatata gcctaagcta tgtctgatta ttaaaaatac actaaacata gctttggcta
     2581 aattcataac ttattgagtt aaaacgataa gcttataaat tctttccaga ttgtcgatat
     2641 ttcgaacgcg gattaacagc cgacgctgtt ctaattgcat caccaacacg ccatcttccg
     2701 acaagttcat cgctttgatt cggctatatt caatccagac attggcgaag aaaaaacctt
     2761 tttgtttaaa gatgatcttc ggaacgcgga tccagaatat ataaaaaccc atcagagcca
     2821 gtgcgcttaa taaccatgtc gttattaatg caccatgatt cgtgacgttg ttatagataa
     2881 gaatgacaat caatccgacg aagataacgc tatcgatgcg accacgccgg agcaaaggaa
     2941 ttgccagcag ggtggggccg ttacggcggg gcatgatgaa ctgatcgtag atcgcgaagg
     3001 ccaggagtgc ggcgatgaaa agaatcagta ccaggtccgt gattgtcatt aatcctccag
     3061 ataaaaaaac ggggccaaaa ggccccggta gtgtacaaca gtcttacagt cccagcaggc
     3121 cgcaagcgta accagcgata ccgatgacga agaagccaac gatgatccac agcgggttaa
     3181 cttttttgcg cagtagccac atacaagcaa aggtcagcag cagtggtacc aggcctggca
     3241 ttaactggtc cagaatagtc tggacagtag taacgtgttc tttgcccgtc tggtcagtaa
     3301 tgcgagagac aaccagcggg atgttgacat gtgtccactt gttaaccaat gcccccatga
     3361 caaacaggcc gaggatagac gccccttccg tcagtttttg caggaagcca ccacccatat
     3421 ctttaacgat atcgatacct ttggagtaac catacgctac gccgtagtaa cgggttgcca
     3481 gacgcaccag gttaaacagg atgaagaaca gcagcggacc taacaggctg ccgctcatcg
     3541 cgataccggc acccagtgct gcaaataccg gacgtacggt tccccagaag atcgggtcgc
     3601 ctacaccagc cagcggcccc atcaaaccga ctttgatacc gttgatagca ccgtcgtcga
     3661 tctctgcgcc attagcacgc tgttcttcca gcgccagggt tacgccgaga atcggcgcag
     3721 ccacgaacgg ctgggtgtta aagaactcca ggtgacggcg aatagcttgt ttacgagctt
     3781 cgttgttctc agggtagagg cgacgaattg ccggtaccat agagaagcag aaacccagtg
     3841 cctgcatacg ttcgaagttc catgaaccct ggaagaggtt agaacgcagg aagacgccac
     3901 gaatatcact ttgagtgagt tttttctcgg tggtagtttg agttgtatca accatttcgc
     3961 tcacctgtta gtccagttcg ttatcgagat cgttgttacc agcagcctga gcaggcgcac
     4021 cggctacgcg gttgtatttc gggctaagtt ggatgtagag cactgccata acagtaccga
     4081 tcacacccag agcaaccagg ttaaagttgg tgaatgctgc ggttacgaag ccgaggtaga
     4141 agaacggcat caggtagcca gcacgcatca tgttgataac catcgcataa ccaaccacca
     4201 cgatcatgcc accggcgata ttcagaccat tggtcaccac ttccggaatc gcattcagca
     4261 tgttctgtac ttcgctggta ccaacagaca gcgcaacgat gacggccgga atagccacac
     4321 gcattgcttg caggaacaga gaagaaacgt ggatccagga aatcgctgtc aggttgccgt
     4381 tatcagcagc cttatccgca gcgtgctgga aagcaacggt aatagtacga acgatgatgg
     4441 tcagtacctg gcccgcagcg gccagaggga ttgccagtgc gatacctgca ccaatgctct
     4501 gatgacctgc gataaccaga atggtagaaa tgatagaagc cagagcggcg tcaggcgcaa
     4561 ctgcagcacc gatgttcatc cagcccagcg cgatcatttc cagcgtacca ccgataataa
     4621 taccggtttt catatcccca agaacgatac ccaccagggt acacgcgatt agcggacggt
     4681 gaaactgaaa ttcatcgagg attgatccca tacctgcgat acaggctacg ataaatacca
     4741 gcacaatttg aagagtggta atctccattg tacttctcct gtttacgtaa gacttaagtg
     4801 tgaaaactga gtgataatca acacaatacg ttacttatcg attttgctga tcagatccat
     4861 cattttcagt ttcggatcgg tggaaacctt acggacttcc agctcaatac cgcgcgcatt
     4921 cagtttcttg aacgcctcga tatctttttc atcaaccgaa accgcgttat tcacctgggt
     4981 tttaccctga cggaatgcca taccaccgac gttaacagag gtgattttca cgccgccttc
     5041 aacgagacgc tctacatctg ttgggttggt aaataacagc attacgcgtt cgccagcata
     5101 tttcgggttg ttgtagacgc gaatcatttt ggcaacatca actacgtgtg ctgttacgcc
     5161 cggaggtgca acctgggtga gcagtgtctt acgaacggta tccgcagcca cttcatcact
     5221 aacaacaata atacgggaga cattggtttc tttggtccag cgggtggcga cctgaccgtg
     5281 aatcagacgg tcgtcgatac gcgcaaggcc aataaccatg tagtcgtttg gccccattgg
     5341 ttttgccgga gttggagccg cttttggtgc tgcggcagcg ggtgctggcg cggctttttc
     5401 aaccggtttg gctttcagtg ctttcacgcc ttcacggcct gtttctactg ccagcgcaac
     5461 cagttcatca aagcttgggt catcatcacg agccattaac gtttccacga gcattggaat
     5521 gttaacgcct gcaatgactt cataatgctc tttgtcgacg acaatgcggc tggcagcatt
     5581 gaacgggctg cctccccatg tatcaacgag aaacagcacg cctttagtgg tgtcgagttt
     5641 tgccaactga gcgttgtact tttcaatcag cgtttcggca ttttcacctg gaacgaaatc
     5701 gatccagccg acgttttcct gctcgcctaa cagcatttct gccgttttaa gcaactgctc
     5761 tgcagcccaa ccatgtgtgc ctataacaat agcaatggtc acttgctacc tcctttatta
     5821 tcgttaacac ctcaacgtgc cagatgtatt tttgaatcgt cgtccacaat cgaatcgatt
     5881 cagataaggg ctacaaccaa aaacccctgc gtttcgcgat ttattttaga tatcgaaaaa
     5941 attattttat gtgatgaaga tccgtaattt aactttcgat tagcagaaat ttcgaaaggt
     6001 aaaatatcct tgtcacattc gtttgcaaag gaaggtaaat ctttgccaaa tcagaggcgt
     6061 ctctgatatg tttaactccc gtttaacaac catggagtat agggcagtag cccgcagtat
     6121 ggatcgtcac cgacgtcatt tcagcatcag gccttttaac gcctgccttt ctggcactct
     6181 atgccgcacc tttcgtttgc attttgtcgt tacgcctgca ttatttctgg cgtcgaatag
     6241 ctattcctta agcaggagct tgtcatggaa ttcttaatgg acccctcaat ttgggcgggg
     6301 ctactcacgc ttgttgttct cgaaattgtg ctgggtatcg ataacctggt cttcatcgcc
     6361 attcttgctg acaaactgcc gccaaaacaa cgcgataaag cgcgtttgct ggggttatca
     6421 ctggcgctga ttatgcgtct ggggctgctg tcgctgattt catggatggt cacgctgacc
     6481 aaaccgctat ttaccgtcat ggatttctcc ttctccggac gcgacctgat tatgttgttc
     6541 ggggggatat tcttgctgtt caaagcaaca accgaactgc atgaacggct ggaaaaccgc
     6601 gatcatgatt ccggccacgg taaaggctac gccagtttct gggtggtcgt cacacagatt
     6661 gtcatccttg acgccgtctt ctcgttggat gcggtaatta ctgcagtagg gatggttaac
     6721 catctgccgg tgatgatggc ggcggtagtg attgcgatgg cggttatgtt gctggcatcc
     6781 aaaccgctga cgcgattcgt taaccagcac cccacggtgg tggtgctctg tctgagcttc
     6841 ctgttaatga ttggtcttag tctggtggca gaaggtttcg gtttccacat tccgaaaggt
     6901 tacctgtatg ccgcgattgg cttctcgatc atcatcgaag tgtttaacca gattgcgcgt
     6961 cgcaacttta ttcgccacca gtcgactttg ccgctgcgag cgcgtactgc cgatgccatc
     7021 ctgcgtttga tgggcgggaa acgtcaggcc aatgttcagc acgatgccga taacccgatg
     7081 ccgatcccgg aaggtgcatt tgccgaagaa gaacgttaca tgattaacgg cgtactgacg
     7141 ctggcgtcgc gttctctgcg cgggatcatg acgccgcgcg gtgaaataag ctgggttgac
     7201 gctaatctcg gggtcgatga aatccgcgag caactgctct cttcaccgca cagtctgttc
     7261 ccggtatgtc gcggtgaact ggatgaaatc atcggtattg tacgtgctaa agaactgctg
     7321 gtggcgctgg aagagggcgt tgatgtggcg gcgattgctt cggcgtctcc ggcgattatc
     7381 gtcccggaaa ccctcgatcc gatcaacctg ttgggcgtgc tgcgtcgtgc tcgcgggagc
     7441 tttgttatcg tgaccaacga gtttggtgtg gtacaaggtc tggtcacgcc gctggatgtg
     7501 ctggaagcca ttgcgggtga attcccggac gctgacgaaa cgccggaaat cattactgat
     7561 ggtgacggct ggctggtaaa aggcggtaca gatttgcatg ccttgcagca ggcgcttgat
     7621 gttgagcacc ttgccgatga cgatgatatc gcgacggtcg cgggcctcgt gatctcggca
     7681 aatggtcaca ttccccgtgt gggcgatgtg attgatgtag ggccactgca tatcaccatc
     7741 attgaagcca atgattatcg tgttgatctg gttcgcattg ttaaagagca accggcgcac
     7801 gatgaagatg
//
LOCUS       DAJVUK010000177         7651 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.177, whole genome shotgun sequence.
ACCESSION   DAJVUK010000177 DAJVUK010000000
VERSION     DAJVUK010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7651
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.177"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..143)
                     /locus_tag="OQQ57_003697"
     CDS             complement(<1..143)
                     /locus_tag="OQQ57_003697"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958299.1"
                     /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGTPTGVACSVCPGGVT
                     SGHP"
     gene            371..979
                     /locus_tag="OQQ57_003698"
     CDS             371..979
                     /locus_tag="OQQ57_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HCS1958300.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
     gene            1077..2468
                     /gene="selA"
                     /locus_tag="OQQ57_003699"
     CDS             1077..2468
                     /gene="selA"
                     /locus_tag="OQQ57_003699"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HCS1958301.1"
                     /translation="MTTETRSLYSQLPAIDRLLHDSSFLSLRDTYGHTRVVELLRQML
                     DEAREVIRDSQTLPAWCENWAQEVDARLTKEAQSALRPVLNLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2465..4309
                     /gene="selB"
                     /locus_tag="OQQ57_003700"
     CDS             2465..4309
                     /gene="selB"
                     /locus_tag="OQQ57_003700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HCS1958302.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPSFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPGREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADAPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQNDSEALAVHLQRGAVNLPDFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFSDEPWW
                     VRDLAKETGTDEQAMRLTLSQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
     gene            4499..5650
                     /gene="yiaY"
                     /locus_tag="OQQ57_003701"
     CDS             4499..5650
                     /gene="yiaY"
                     /locus_tag="OQQ57_003701"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HCS1958303.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAYQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIPAGLRDLNVKEEDFAVLATNSLKDACGFTNPIQATHEEIVAIYRAAM"
     gene            5815..7353
                     /gene="aldB"
                     /locus_tag="OQQ57_003702"
     CDS             5815..7353
                     /gene="aldB"
                     /locus_tag="OQQ57_003702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase AldB"
                     /protein_id="HCS1958304.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
BASE COUNT         1810 a         1917 c         2134 g         1790 t
ORIGIN      
        1 ggatggccgg acgtcactcc gccggggcac accgaacagg ccacgccggt gggggtacca
       61 atgcgcaccc cggctgaacc ctgaacaatg ctaccgccat actgcgtcat gtcgccctga
      121 cgcgctgccg gttttccgct catttctcat ccttgtttta tcgggttatt tgtctgctga
      181 caggcaaaac cctacagatt tataagaaag cctgaagtga gatatccatc agagtgaaat
      241 aattaggaaa atatttatat caccatgata aatatgtgat ttatttggaa gtaacaaacc
      301 atcaacattt tctgcccttt ttcccatcac caggccatac tgatattttt cctcgcacaa
      361 aggactcggc atgaaactcg tcggtagcta caccagcccg tttgtacgca aactttctat
      421 tctgttgtta gaaaagggca taactttcga atttattaat gaactgccct ataacgcgga
      481 caacggcgtg gcgcaattta acccgttagg aaaagtgccg gtgctggtga ccgaagaggg
      541 cgaatgctgg tttgattcgc cgatcatcgc tgaatatatt gagttaatga atgtcgctcc
      601 ggcgatgttg ccgcgcgatc cgctggagtc gttgcgggtg cgcaaaattg aggcgctggc
      661 ggatggcatt atggatgccg ggctggtatc ggtgcgtgaa caggcgcgtc cggcggcgca
      721 gcagtctgaa gatgaattgt tacgccagcg ggagaaaatc aaccgcagtc tggatgtgct
      781 ggaaggatat ctggtcgatg gcacactcaa aaccgatacg gtcaatctgg cgactatcgc
      841 cattgcctgt gctgtcggat atctcaattt ccgccgcgtt gcgccaggtt ggtgtgtcga
      901 ccgcccacac ttagtcaaac tggtcgaaaa cctgtttagc cgcgaaagtt ttgctcgcac
      961 cgaaccgcca aaggcttgat gcgcgatatg tcctcctgac ccatctcacg ttacaatccg
     1021 tggttatgtt aaacgccctt ctccatgtga gagggccttg attagccagg tttcctatga
     1081 caaccgaaac gcgttccctc tatagtcaac ttccggctat tgatcgctta ttgcacgata
     1141 gctccttcct ttctttgcgt gatacttatg gtcacacccg cgtggtggaa ttgttgcgtc
     1201 agatgctcga cgaagcgcga gaagtgattc gtgacagcca gacgcttcct gcgtggtgtg
     1261 aaaactgggc gcaagaagtc gatgcccggt tgacgaaaga ggcgcagagc gcgctgcgtc
     1321 cggtgctcaa cctgacggga accgtgctgc ataccaacct tggacgagct ttacaggcgg
     1381 aagccgcggt ggaagccgtt gcgcaggcta tgcgttcgcc agtgaccctc gagtacgatc
     1441 tggacgacgc tggacgcgga catcgcgatc gggcgctggc gcaactgctg tgccgtatta
     1501 cgggggcgga agatgcctgt atcgtcaata acaatgcggc ggcggtgtta ttgatgttgg
     1561 cggccactgc cagcgggaaa gaggtggtag tatctcgcgg cgaattggtg gagattggcg
     1621 gcgcgtttcg tattcccgat gttatgcgtc aggcaggctg caccctacac gaagtaggga
     1681 ccaccaaccg cacgcacgcg aatgattatc gtcaggcggt gaatgaaaat accgcactgt
     1741 tgatgaaagt acataccagt aactacagca ttcaggggtt caccaaagcg atagatgaag
     1801 cggaactggt ggcgctcggc aaagagctgg atgttcccgt agtgactgat ttaggcagtg
     1861 gctcgctggt cgatcttagc cagtacggtt tgccgaaaga gccaatgccg caggagttga
     1921 ttgcggcggg cgtcagtctg gtgagcttct ccggcgacaa gttgttaggc gggccgcagg
     1981 cagggattat cgttggtaaa aaagagatga tcgcccgcct gcaaagccac ccgctgaagc
     2041 gtgcattacg cgcggataaa atgaccctcg cggcgctgga agccacgttg cgtctttatt
     2101 tacaccctga agctctgagt gaaaaattac cgaccctgcg cctgcttacc cgcagcgcag
     2161 aggtcattca aatccaggca caacgtttac aggctcccct tgccgcacat tacggcgcgg
     2221 agtttgcggt acaggttatg ccatgtcttt cgcagattgg cagtggttcg ctgccggttg
     2281 atcgcctgcc gagcgcggca ttaacgttta caccccatga tggacgcggt agccaccttg
     2341 agtcattagc cgcccgctgg cgtgaattgc cagtgccggt gattggtcgt atttatgacg
     2401 gacgattgtg gctggattta cgctgccttg aagatgagca acggtttttg gagatgttgt
     2461 tgaaatgatt attgcgactg ccggacacgt tgaccacggc aaaacaacct tattgcaggc
     2521 gattactggc gtaaatgctg accgtctgcc ggaagaaaaa aagcgcggca tgaccatcga
     2581 tctcggctat gcctactggc cgcagccgga tggtcgcgtg cctagtttta tcgacgtacc
     2641 cggtcatgaa aagtttcttt ccaacatgct ggcgggcgtt ggtggtatcg atcacgcgct
     2701 gttggtggtg gcgtgcgatg acggcgtgat ggcgcagacc cgtgagcatc tggcgatttt
     2761 gcagctgacc ggtaacccga tgctgacagt ggcgctgacc aaggccgatc gcgtggacga
     2821 agcgcgtgtt gatgaggttg aacgccaggt aaaggaggtg ctgcgggaat acggttttgc
     2881 tgaggcaaaa ctgtttatca ccgcagcaac cgaaggtcgg ggaattgatg ccctgcgcga
     2941 gcatctgctt cagttaccag gacgtgaaca cgccagccaa catagtttcc gcctcgcgat
     3001 cgaccgcgca tttaccgtaa aaggtgccgg gctggtcgtc accggtacgg cgttaagcgg
     3061 ggaagtgaag gtaggcgatt cactctggct gactggtgta aataaaccga tgcgtgtacg
     3121 tgcgctgcat gcacaaaacc agccaacaga aaccgcccat gccgggcagc gtatcgcgct
     3181 taacatcgcg ggtgatgcgg aaaaagagca gattaaccgt ggcgactggc tgcttgccga
     3241 tgcgccgcca gagccgttca cacgggtgat tgtcgagctt caaacccata caccgctgac
     3301 ccagtggcag ccgctgcata ttcaccacgc cgccagccac gtcacgggac gcgtttcact
     3361 gctggaagat aaccttgctg aactggtctt cgacaccccg ttatggctgg cagataacga
     3421 ccgcctggta ttgcgcgata tctctgcccg caacacgctg gccggagcgc gcgtcgtgat
     3481 gcttaacccg ccgcgtcgcg gtaaacgtaa accagagtat ctgcaatggc tggcttccct
     3541 cgccagggca cagaatgata gcgaagcgtt agccgttcac ctgcaacgcg gcgcggttaa
     3601 tcttcctgat ttcgcctggg cgcgccagct caacggcgaa gggatgcgcg aactgctgca
     3661 acagcctggc tatattcagg ctggttatag cttgttgaat gcgccggttg ccgctcgctg
     3721 gcaacggaaa attctcgaca cattagcgac ttatcatgag caacatcgcg atgaacctgg
     3781 gcctgggcgc gaacgtctgc gacgtatggc gttgccaatg gaagatgaag cgctagtact
     3841 gttgctgatt gaaaagatgc gcgaaagcgg cgacatcctc agtcatcacg gttggctgca
     3901 tctgccggat cacaaagcgg gcttcagcga agagcagcag gccatctggc aaaaagcaga
     3961 gccgctgttt agtgacgagc cgtggtgggt gcgtgatctg gcaaaagaga cgggtaccga
     4021 cgagcaggca atgcgcttga cgctaagcca ggcggcgcag caaggaataa ttaccgcgat
     4081 cgtcaaagat cgttattacc gtaacgatcg gattgtcgaa tttgccaata tgatccgcga
     4141 tctcgatcag gagtgtggtt caacctgcgc ggcggatttc cgcgatcgct taggcgtagg
     4201 ccgaaagctg gcaattcaga ttctggaata ttttgaccgc attggcttta cgcgtcgtcg
     4261 tggaaatgat catttattgc gcgacgcatt attatttccg gaaaaataag gaaatgatta
     4321 attaattttt aaaataaatt aatacaaatt tcttatgatt ttaaaaaaag cacattgttt
     4381 aatgaataca atgtgctttt tattagatta attttgataa ttaataataa tgatcatgtt
     4441 ttcgaatgaa aatcctcagt aagcttccca ccctttttta cactttcagg agtgtgttat
     4501 ggcatcttca actttcttta ttccttctgt gaatgtcatc ggcgctgatt cattgactga
     4561 tgcaatgaat atgatggcag attatggatt tacccgtacc ttaattgtca ctgacagtat
     4621 gttaacgaaa ttaggtatgg cgggcgatgt gcaaaaagca ctggaagaac gcaatatttt
     4681 tagcgttatt tatgatggca cccaacctaa ccccaccacg gaaaacgtcg ccgcaggttt
     4741 gaaattactt aaagagaata attgcgatag cgtgatctcc ttaggcggtg gttctccaca
     4801 cgactgcgca aaaggtattg cgctggtggc agccaatggc ggcgatattc gcgattacga
     4861 aggcgttgac cgctctgcaa aaccgcagct gccgatgatc gccatcaaca ccactgcggg
     4921 tacggcctct gaaatgaccc gtttctgcat catcactgac gaagcgcgtc atatcaaaat
     4981 ggcgattgtt gataaacatg tcactccgct gctttctgtc aatgactcct ctctgatgat
     5041 tggtatgccg aagtcactga ccgccgcaac gggtatggat gccttaacgc acgctatcga
     5101 agcatatgtt tctattgccg ccacgccgat cactgacgct tgtgcactga aagccgtgac
     5161 catgattgcc gaaaacctgc cgttagccgt tgaagatggc agtaatgcga aagcgcgtga
     5221 agcaatggct tatgcccagt tccttgccgg tatggcgttc aataatgctt ctctgggtta
     5281 tgttcatgcg atggcgtacc agctgggcgg tttctacaac ctgccacacg gtgtatgtaa
     5341 cgccgttctg ctgccccatg ttcaggtatt caacagcaaa gtcgccgctg cacgtctgcg
     5401 tgactgtgcc gctgcaatgg gcgtgaacgt gacaggtaaa aacgacgcgg aaggtgctga
     5461 agcctgcatt aacgccatcc gtgaactggc gaagaaagtg gatatcccgg caggcctacg
     5521 cgacctgaac gtgaaagaag aagatttcgc ggttctggcg actaattccc tgaaagatgc
     5581 ctgtggtttt actaacccga tccaggcaac tcacgaagaa attgtggcga tttatcgcgc
     5641 agcgatgtaa tcatcatttc cacaacggct ggcaaattgt cagccgcttt ttcaactatc
     5701 tctgtaaccc ttgcccgtaa attcgtgata gccgtcgtaa agctgttacc gactggcgaa
     5761 gatttcgcca gtcacgtcta cccttgttat acctcacacc gcaaggagac gatcatgacc
     5821 aataatcccc cttcagcaca gattaagccc ggcgagtatg gtttccccct caagttaaaa
     5881 gcccgctatg acaactttat tggcggcgaa tgggtagccc ctgccgatgg tgagtattac
     5941 cagaacctga cgccggtgac tgggcagctg ctgtgcgaag tggcgtcttc gggcaaacga
     6001 gacatcgatc tggcgctaga tgctgcgcac aaagtgaaag ataaatgggc gcacacctcg
     6061 gtgcaggatc gcgcggcgat tctgtttaag attgccgatc gaatggaaca aaacctcgag
     6121 ctgttagcga cagctgaaac ctgggataac ggcaaaccca ttcgcgaaac cagtgctgcc
     6181 gacgtgccgc tggcgattga tcattttcgc tatttcgcct cgtgtattcg ggcgcaggaa
     6241 ggtgggatca gtgaagttga tagcgaaacc gtggcctatc atttccatga accgttaggc
     6301 gtggtggggc agattatccc gtggaacttc ccgctgctga tggcgagctg gaaaatggct
     6361 cccgcgctgg cggcgggcaa ctgtgtggtg ctgaaacccg cacgtcttac cccgctttct
     6421 gtactgctgc taatggaaat tgtcggtgat ttactgccgc cgggcgtggt gaacgtggtc
     6481 aatggcgcag gtggggaaat tggcgaatat ctggcgacct cgaaacgcat cgccaaagtg
     6541 gcgtttaccg gctcaacgga agtgggccaa caaattatgc aatacgcaac gcaaaacatt
     6601 attccggtga cgctggagtt gggcggtaag tcgccaaata tcttctttgc tgatgtgatg
     6661 gatgaagaag atgccttttt cgataaagcg ctggaaggct ttgcactgtt tgcctttaac
     6721 cagggcgaag tttgcacctg tccgagtcgt gctttagtgc aggaatctat ctacgaacgc
     6781 tttatggaac gcgccatccg ccgtgtcgaa agcattcgta gcggtaaccc gctcgacagc
     6841 gtgacgcaaa tgggcgcgca ggtttctcac gggcaactgg aaaccatcct caactacatt
     6901 gatatcggta aaaaagaggg cgctgacgtg ctcacaggcg ggcggcgcaa gctgctggaa
     6961 ggtgaactga aagacggcta ctacctcgaa ccgacgattc tgtttggtca gaacaatatg
     7021 cgggtgttcc aggaggagat ttttggcccg gtgctggcgg tgaccacctt caaaacgatg
     7081 gaagaagcgc tggagctggc gaacgatacg caatatggcc tgggcgcggg cgtctggagc
     7141 cgcaacggta atctggccta taagatgggg cgcggcatac aggctgggcg cgtgtggacc
     7201 aactgttatc acgcttaccc ggcacatgcg gcgtttggtg gctacaaaca atcaggtatc
     7261 ggtcgcgaaa cccacaagat gatgctggag cattaccagc aaaccaagtg cctgctggtg
     7321 agctactcgg ataaaccgtt ggggctgttc tgatataaga agctggtcgc attgggtatt
     7381 cattgcctga tgtgacgctt acgcgtctta tcatgcctac gggaacctga ccgtaggccg
     7441 gataaggcgt acacgccgca tccggcataa acaaagcgca cgttgttaca atttacgttt
     7501 taaacctacg tgcgcaataa tccagactac gccaacagaa gtgcgtttct ggggcgtgtt
     7561 ttgtcaggag tttaatctcg cgtttcgatg gtgagcgggc gaactaggcc gtaaatcacc
     7621 attggtgatc cgaggccaat cagcaataaa c
//
LOCUS       DAJVUK010000178         7641 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.178, whole genome shotgun sequence.
ACCESSION   DAJVUK010000178 DAJVUK010000000
VERSION     DAJVUK010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7641
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.178"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            566..3979
                     /locus_tag="OQQ57_003703"
     CDS             566..3979
                     /locus_tag="OQQ57_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000438152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HCS1958305.1"
                     /translation="MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTE
                     LMVRWLYRQERLPEGIKANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIK
                     AKDTYWLLKEAYLLGIWLYVRYAHGNVDDCPKFTLPPLTQSSGRADEKRLEDAIKAQD
                     ESRERELALQRALQQEQEKAEHLTQRLNEARARNQHVADILSIDEAETRRRLIDSRLL
                     AADWNVGEELKNTDQVTQEHPVKEQPTTSGDGYADYVLWDEAHKPLAVVEAKKTSVNA
                     EQGRIQARLYADWLEKEYGQRPVIFYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQ
                     YLIQQRETRLPLNRVPHVKDNEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGT
                     GKTRVAIALSKLMIDARWVKRVLFLCDRKELRKQAANAFNQFTNEPLYVVGKSKKADR
                     QNARIYIATYPGMMKIMDHFDVGYFDLIIADESHRSIYNVYGDLFKYFDALQIGLTAT
                     PIDMVSKTTFGLFGCEGRIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLS
                     DAQIRELEEQGIDPNTLEFDGKALDEAIYNKDTNRYILRNLMENGLKDRDGQLPGKTI
                     IFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDPRAEQLIDDFKGLDESTNKELTI
                     AISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTRLCPGLYGYDDNGKPLDKQ
                     KFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVMLGAAAQRKFDKQAVDLVAH
                     QLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQDLLSVLAPLMQWLDVRG
                     QSDAIRFDMDILAAQTARYTNPEELDVLWPIIVEKVERLPPHLAQVQQQGQRINQLRN
                     LSWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDANLIQTETRKTNIR
                     SIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRAL
                     KEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLKNHIRDYG
                     TIEMRQLFEQPFTHIHNEGVTGVFPDIAQIARLQKIVEELGVVTDAATV"
     gene            4043..5677
                     /locus_tag="OQQ57_003704"
     CDS             4043..5677
                     /locus_tag="OQQ57_003704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HCS1958306.1"
                     /translation="MITGDLKSKIDGLWEDFWVGGITNPLTVIEQITYLMYSRMLDTQ
                     EQRDEKRKQIAGIDFKPRFAPEQQEFRFSHYSNLGSDEMMEVVRDGVFQHFRQLGQAD
                     ASKVTLLGNFMKDARLEIVKPSLLTKAVEVIKNLPLDRGDTKGDLYEYLLSKLTTAGI
                     NGQFRTPRHIIRTMVEMMEPNPARGETICDPACGTGGFLATSYEYLLEKYSSLESIHT
                     EIGTNERGELEEQKIFTGDLLTPWRNHVDNNMFHGYDFDTTMLRIAAMNLIMHGVDAP
                     DIHYQDTMSQSFSTNFPQASKNAFNLILANPPFTGSLDEEDIDSTLSAMVKTKKTELL
                     FLARILQMLKVGGRSATIVPQGVLFGSSKAHQSLRKTLVEDNQLETVINLPSGVFKPY
                     AGVATAILIFTKGGQTDEVWFYDLQNDGYSLDDKRNPIKDNDLPHLLASWKHYRTLRG
                     LPVDNFMGKKLASLLKQQYPEGINAGVDFKDRTQAAFVVPKADIAAQKYDLSINRYKE
                     VVYQAEEYEDPKVILKRLKDLEKEILADLDELEGML"
     gene            5686..6756
                     /locus_tag="OQQ57_003705"
     CDS             5686..6756
                     /locus_tag="OQQ57_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001438891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCS1958307.1"
                     /translation="MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLC
                     SYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKT
                     ITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
                     ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKY
                     ATYIPQEKAKRIFEVDDVMIARYGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFY
                     LLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDEILDRLARIEKFKEK
                     IEISLNHLEIQFLSLQKRLIGF"
     gene            complement(6881..7597)
                     /locus_tag="OQQ57_003706"
     CDS             complement(6881..7597)
                     /locus_tag="OQQ57_003706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958308.1"
                     /translation="MLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKIEE
                     GVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLP
                     NICKGNARIPIFHFLNHAKLINPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRS
                     ETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELLKILKKHIDEAMNTQVL
                     SSNFCKLVCIYDYIKNSHRY"
BASE COUNT         2222 a         1740 c         1792 g         1887 t
ORIGIN      
        1 gtcctgttct cccaaatatc atggtattga tacgggagat tatgccgtac aggtacgaca
       61 cgttatgtcg tgccaaaggg gagtggatag aaaaaatggc gaagatgcga aaagttgatt
      121 aatgcattga aaaaaaatga attaataatg aacttgggta aaagcgccat caaaatacga
      181 cacgacctgt cgtattttgt gttagccggg aaaagatatc tgctacttac taaaatgatt
      241 tagtgctgaa aatatttata agccaataaa tagacaggta ttacggagta acgcccaggc
      301 tattttaacg agcctgctgt tttattggct caaaaaacat atcccataga tgatcagcca
      361 tacccgcgtt agtgagcaag gtatcccttg agtagccagg gctgaagacg cccattgatg
      421 ggcgaaaacc aaggttctgg ccgttaaagc ggctatgtcg ttaaacacat caccaccata
      481 tgccatccgg ctcacttcgt cggccaaatt agtgtgatat tctttccaga atttctgttg
      541 tatccacaac ataaggcgat gattgatgga gcagtctctc aattttgaaa tgttgcgcag
      601 ccagtggccg gaactggcag aactcgcatg tatggcagag cgctatgttc actccgatcc
      661 ggaaagctgc ctggttaagc tgcgcaacta caccgaattg atggtgcgct ggttgtatcg
      721 tcaggagcgg ttgccggaag gtattaaggc taatctttac gatttaatga acgctgatgt
      781 ctttaccagc atgatgccgg aagccatcat catgaaaatg gatgcgctgc gtatccatgg
      841 caaccgtgcc gcgcacggcg gacgtatcaa agctaaagat acttactggc tgctcaaaga
      901 agcgtatttg ttgggaattt ggctgtatgt tcgctacgcc cacggtaatg ttgatgactg
      961 ccccaaattt acactccctc cattaacaca atcttcaggt cgtgcagatg aaaaacgtct
     1021 ggaagatgca atcaaggctc aggatgaaag ccgtgagcgc gaactggcgc tacaacgcgc
     1081 actacagcaa gaacaggaaa aggccgaaca cctcactcaa cgcctgaatg aagccagagc
     1141 gcgtaaccag catgttgccg atattctctc tattgatgaa gcggaaaccc gccgtcgcct
     1201 gattgactct cgcttacttg cagccgactg gaatgtaggg gaagaactta aaaacacgga
     1261 tcaagtcaca caagaacatc cagtcaaaga gcaacccacc acctctggtg acggttatgc
     1321 agactatgtc ttgtgggatg aggcacacaa accgttggcg gtggtggaag caaaaaaaac
     1381 cagcgtcaat gccgagcaag gacgaattca ggcccggctg tatgcagact ggctggaaaa
     1441 agaatacggt cagcgtccgg tcatcttcta caccaacggc tatgatatct ggctgtggga
     1501 tgaccataaa actcatggtt atcccccgcg tcgggtgttt ggcttctaca gcaaggaaag
     1561 cctgcaatat cttattcagc agcgtgaaac ccgtctgccg ctgaacagag tgccacacgt
     1621 aaaagataac gaaggtaagg ccgttgccgg acgtttgtac cagctcgaaa ccattgcccg
     1681 cgtcagtgaa cggtttacca acaagtaccg acaatcgtta attgttcagg ctacgggtac
     1741 aggcaaaacc cgcgtggcaa ttgcactaag caaactgatg attgatgccc gctgggtaaa
     1801 acgcgtcctg tttctttgcg accgtaaaga actgcgtaaa caggcggcaa atgcctttaa
     1861 tcaattcacc aatgagccgc tgtatgtggt cgggaaatcg aaaaaagcag acaggcagaa
     1921 tgccagaatc tacatcgcta cctatcccgg tatgatgaaa atcatggacc atttcgatgt
     1981 cggttatttc gatttgatca tcgccgatga atcccaccgc tctatctaca acgtctacgg
     2041 cgatctgttt aagtattttg atgccctcca gattggcctg acggccacgc caattgacat
     2101 ggtgagtaaa accactttcg gcctgtttgg ttgtgaagga cgtattccta ccgccaacta
     2161 cagcctggaa gatgccatcg ccgataacaa tctggttccc tatgaggttg tcacacacac
     2221 aacagaattc ctgcgcgaag gtatcaaacg ggagaaatta agcgacgcac aaatccgcga
     2281 gctggaagaa caaggcatag atcccaatac gctggagttt gatggcaagg cgctggatga
     2341 ggcgatctac aacaaagaca ccaaccgcta tatcctgcgt aacctgatgg aaaatggcct
     2401 gaaagatcgg gacggccagt tgcctggtaa aaccatcatt ttcgcccgta accacaaaca
     2461 cgcgctgctg ttgaatgaat tgttcgacga tatgtaccca cagtttgccg ggcgcttctg
     2521 ccaggtcatc gacaactacg atccccgcgc cgagcaactg attgatgatt ttaaagggct
     2581 ggatgaaagc accaacaaag agctgaccat cgctatctcc gttgacatgc tcgataccgg
     2641 tattgatgtc ccggaaattg tgaatctggt ctttgccaaa ccggtcaaat caaaagtgaa
     2701 gttctggcag atgattggcc gtggtacgcg cctctgtccg gggttgtacg gttacgacga
     2761 taacggcaaa ccgctggata aacagaaatt ccgcattttc gatcactggg gcaattttga
     2821 gtatcacgag ctgcataccg aagaggcgga agtcacagcg acaaaatcgc ttgcgcaaaa
     2881 acgcttcgaa gcgtgggtta tgctgggggc cgctgcgcag cgtaaattcg acaaacaggc
     2941 ggtggattta gttgctcacc agcttcgcga gcaaatcaac gcactggatg aaaagtcgat
     3001 tgccgtacag gaaaaatggc agcagaaagc gcagtacagt gatgaaaagg tgctgcgcca
     3061 gctttctccg aaaacacagc aggatctgct atctgttctg gccccgttga tgcagtggct
     3121 ggacgtgcgc gggcaaagcg atgccatacg ctttgatatg gatattctgg cggcgcaaac
     3181 tgcccgttat accaacccgg aagagctgga tgttctctgg ccgatcatcg tcgaaaaagt
     3241 ggagcgcctg ccgccgcatt tggcgcaggt gcagcaacag ggacaacgaa tcaatcagct
     3301 tcgtaattta agctggtgga agcaggccag cctggaagag ctggaggata ttcgcattca
     3361 tttgcgcggt atcatgcacc tgatggaaaa agacgcgacg cctaaatttg gttcgataca
     3421 ggtggatatt accgaagatg cgaacctgat ccagacggag acccgcaaaa ctaatatccg
     3481 ctcgattgat ttcaaactct atcgccagca ggttcagggg gcgctggagc cgctgttcca
     3541 gcaaaacccg gttctgaaga aaatccgcaa cggcgagcca gtcacgcaaa acgagctgga
     3601 tgagctggcg aagctggtgc tgatccagaa ccccaacgtt gatattcgtg cgttgaaaga
     3661 gttttatccg caggcaaccg ccagcctgga taaacttttg cgtaccatca tcgggatgga
     3721 cagcgacgcg gtggaagtgc gttttgccca gttcgccgct gataacagcc tgaccagcca
     3781 acaactgcgc ttcctgtcat tgctgaaaaa ccacattcgc gattacggca ccattgaaat
     3841 gcggcagctc tttgaacagc cttttacgca tatccacaac gaaggcgtta ccggtgtgtt
     3901 ccctgatata gcgcaaatcg cccgcctgca aaagatagtc gaagagctgg gtgttgtgac
     3961 cgacgcagcg acggtataat acacgcatga caagccccgg cagcggggct tttgtattta
     4021 aaacaggata taaacgctaa caatgattac tggcgactta aaaagtaaaa tcgacggact
     4081 atgggaagat ttctgggtgg gtggtatcac caacccgctg accgtaatcg aacagatcac
     4141 ctatctgatg tattcccgga tgctggatac ccaggaacaa cgcgacgaaa agcgtaaaca
     4201 aatcgcgggt attgatttta aaccgcgttt tgcgccagaa cagcaggagt tccgtttcag
     4261 tcactatagc aaccttggct cggatgagat gatggaagtg gtgcgcgatg gcgtattcca
     4321 gcatttccgt cagctcggcc aggccgatgc ttcgaaggtg acgctgctgg gcaactttat
     4381 gaaagatgct cgtctggaga ttgttaagcc gtcattgctg accaaagcgg ttgaggtaat
     4441 caaaaacctg ccattggatc gcggcgacac caaaggcgac ctttacgaat acctgttaag
     4501 caagctgaca actgccggaa tcaacggaca gttccgcaca ccgcgccaca ttatccgcac
     4561 gatggttgaa atgatggagc cgaacccggc ccgcggcgag acgatttgcg atcccgcctg
     4621 tggcaccggt ggttttctgg caaccagcta tgaatatctg ctggagaagt acagctcgct
     4681 ggaatccatt catactgaga ttggcaccaa cgaacgtggc gagctggaag agcaaaaaat
     4741 ctttaccggc gatctgctga caccgtggcg taaccatgtg gataacaaca tgttccacgg
     4801 ttacgacttt gacaccacaa tgctacgtat cgccgccatg aacctgatta tgcacggcgt
     4861 ggatgcgcct gatatccact atcaggacac aatgagccag agtttcagca caaacttccc
     4921 gcaggccagt aaaaacgcct tcaacctgat tctggcgaac ccgccgttta ccggttcact
     4981 ggacgaggaa gatatcgact ccacgctgtc ggcaatggtg aaaaccaaaa aaaccgaact
     5041 actgttcctg gcgcgtattc tgcaaatgct gaaagtgggc gggcgcagtg ccactatcgt
     5101 gccgcagggc gtgctgtttg gctctagcaa ggcgcaccag tcacttcgca aaacgctggt
     5161 ggaagataac caactggaaa cggtgatcaa tctgccttct ggtgtattta aaccttacgc
     5221 tggcgtggcg acggcgatcc tgatctttac caaaggcggt caaacggatg aggtctggtt
     5281 ctacgatcta caaaatgacg gctacagcct ggatgataag cgcaacccga taaaagacaa
     5341 cgatctgccg catctgctgg caagctggaa gcattaccgt actttacgcg ggctaccggt
     5401 tgataacttt atgggtaaga agttagcctc gttgcttaaa cagcagtacc cggaagggat
     5461 taatgctggc gttgatttta aagatcgcac gcaggcggcg tttgttgtac cgaaagcgga
     5521 tattgctgcg cagaaatacg atctatccat caaccgttat aaagaagtcg tgtatcaggc
     5581 ggaggaatat gaagatccga aggtgatatt gaagcggtta aaggatctgg aaaaagagat
     5641 tctggcggat ttggatgagc tggaggggat gctgtgagtt cggcgatggt gaagttaggg
     5701 gatgttatta atgttcacta cggaaaagca ttaaaagctg atcagcgtgt atcgaatgga
     5761 agtgtccatg tgtttggtag ttcaggaatt gtcggcaacc acgataaaac gctttgcagc
     5821 tatcccacga taattattgg ccgcaaaggc agcgttggtg ctattacctg ggctccaagc
     5881 ggaggctgga tcattgatac tgcttattac gttgagatca aagataataa taagttagat
     5941 ctccgatact tgttttatat tctgagcgga attgatctca ctaagaaaac gattaccaca
     6001 agtattcctg gattaaatag agacgatctc tatgatacat ttattaaatt accacctttt
     6061 gaagagcaga aacgaattgt ggatcttctc gataaagctg agggtatacg ccaaaaacgt
     6121 gagcaatcca tcaaactggc tgatgatttt ttgcgtgcta cgtttgctac aatgtatggg
     6181 aatcctatta caaaccccaa aaaatggcct gtccatctta tgggagaaat tattgaattt
     6241 aaaggtggaa atcaaccacc taaaagtgat tttatttttg aacctaaaca gggttatatt
     6301 agattagtac aaattagaga ttttaaatcc gataaatatg cgacgtacat tccgcaagaa
     6361 aaagcaaaac gtattttcga agttgatgat gttatgattg ctcgttatgg gccacctgtg
     6421 tttcaaatac ttagaggttt atccggcagc tacaatgtag ctttaatgaa agcttcaccc
     6481 aaagaaaata ttaggaaggg gtttatattc tatcttctac aacttccgga atatcatgat
     6541 gttgttgtaa aaaactctga aagaacagca ggacaaaccg gtgtaaatct tgaactatta
     6601 aacaaattca atgttcccct cccacctata tactatcaag atgagatatt agatagatta
     6661 gctagaattg aaaaatttaa agaaaaaata gaaatatcat taaatcattt agaaatacaa
     6721 tttttatcac tacagaagag attaataggt ttttaaatcc ttagtatcga aataaacatt
     6781 aatttattat attaaattaa gatattttag gaaattaagg cgtcactctt aggtaacgcc
     6841 tttttttact atctcgcccc ctaagaaggt tatatcttac ttaatacctg tgactatttt
     6901 tgatataatc ataaatacac actaatttgc aaaaattact tgacaacacc tgagtattca
     6961 tagcttcatc tatatgtttt ttcaatattt tgagaagctc tcccatatcg cgcttgatta
     7021 atccaggctc catataaggc atcattctta aaaagaaact gaaatcataa gcaagatata
     7081 actcattgac ccccaccttg acctcaggaa cggtttcaga gcgtcgttta tcccatcctt
     7141 gagactgaaa actaatagga gtgatattta atcgtgataa aacgccacct gagagttctg
     7201 tttcattaat tatactccca tcaggattaa ttaatttagc gtgatttaag aagtgaaaaa
     7261 taggaatgcg cgcattgcct ttgcatatat ttggcaaaac atcattaaca acacatcccc
     7321 aatcataata tccattttca aatacaacct ctcggatgag atctacacgc tccagtccaa
     7381 ccaatccttt agttgccatc gattccgatt tttttaccat cgaaatagca ccatatccca
     7441 caacaaactc agttgtactg accccttctt caattttctc tgaatccctc acatataatt
     7501 ttcctttcgg atcatcagtt aagaccaact cataaagttc atcttttatc attcggaata
     7561 aatgtgctgg aatccttttt ttagtttcac tcagcacctc aaatatttct ttataggatg
     7621 gtgcctgaac atattttacc g
//
LOCUS       DAJVUK010000179         7585 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.179, whole genome shotgun sequence.
ACCESSION   DAJVUK010000179 DAJVUK010000000
VERSION     DAJVUK010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7585
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.179"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(64..297)
                     /locus_tag="OQQ57_003707"
                     /pseudo
     CDS             complement(64..297)
                     /locus_tag="OQQ57_003707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080195.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            294..1298
                     /locus_tag="OQQ57_003708"
                     /pseudo
     CDS             294..1298
                     /locus_tag="OQQ57_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003557916.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
     gene            1659..5520
                     /gene="sigA"
                     /locus_tag="OQQ57_003709"
                     /pseudo
     CDS             1659..5520
                     /gene="sigA"
                     /locus_tag="OQQ57_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708742.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease autotransporter toxin SigA"
     gene            5567..6149
                     /locus_tag="OQQ57_003710"
                     /pseudo
     CDS             5567..6149
                     /locus_tag="OQQ57_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000291745.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6552..6952)
                     /locus_tag="OQQ57_003711"
                     /pseudo
     CDS             complement(6552..6952)
                     /locus_tag="OQQ57_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
     gene            6956..7531
                     /locus_tag="OQQ57_003712"
                     /pseudo
     CDS             6956..7531
                     /locus_tag="OQQ57_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         2224 a         1716 c         1771 g         1874 t
ORIGIN      
        1 tatcatcaga tggctgctta aaaaaagaac aaatggtagt gtccgctatt gccagtacac
       61 ctcaagacga catttcttcg ataacgtgtg ttctttctcc tgcatcagct tatacaggga
      121 agtcaggagc ggtctactct gcatttgcct gaccgccagg cgttcagaca ccggtaaccc
      181 gcgtatatcg tgctctatgg cgtacagttc accgattagt ttcagagctt cttccgccgt
      241 cgcgctttta gtactgatat atacatcgtg gattttgcgt cgcgcatgag cccagcatcc
      301 tgcttccgtc cgtcggcgcg cagctctcca atccggataa tatcaccgac aacgccgacc
      361 ggatcagtga tgagtggaag gccttcgacc gcgccatcga aagtaaccac ggtgttcctg
      421 aggctgccgc acgcctgaaa gaacacctcc gggacttccg taacacacat gccgccgcac
      481 agctgggcgt ttctgctgtg gcggcccttc ccggtgatcg cctctctgcc gcactgatgg
      541 ttaaatcaca cggcaccgtc agtgtcgacg gtaaagtctc tgatgctgac ctcacttacc
      601 tggaagaggt ggcaaacagc accgggcagg aggtggacaa aagccgcctg acatcacagg
      661 cctttgcccg cgcggcactg atcactgatg tgggtattgc tctggctacg gaactggaaa
      721 cggccgggca gaaatggtct ctgggcttcc cccccaaatt ccagcgcgtc gacctgttca
      781 actacaacgt gctggtcaga aattatgaca gcagcgcctt caaaggcgac cgctaccaca
      841 acacgaaaaa tggcatcaac gccgacatcg gtgccagtac gaacctggat gacaactgga
      901 cgctgggact ggtcgcacag aacctgatcc cccgtagtat tgagacaaaa gaagtgaacg
      961 gtatcacgga aaccttcagg atccgcccgc aggtgacggc cggtgtctcc tggcacaacg
     1021 cgatgttcac caccgcattt gatgtggatc tgaccccggc cagcggtttc acctccgaca
     1081 gcaaccgtca gtttgccgcc attggcgcag aatttaatgc ctggaaatgg gcacagctgc
     1141 gcgccggtta ccgtcagaat ctggccggta acgacggcag tgcattcacg gccggggtgg
     1201 ggatctcacc gtttgatgtg gttcaccttg atgttgcagg cctgatcggc acggacaaca
     1261 cttacggtgc ggtcgcacag ttccagttca ccttctgagt tccacctgca aaacagcatg
     1321 cacattatcg ctgcatgttg tttccatcat caaaagtctg tcggacatcg acagacttaa
     1381 ctcccccgga taatacagaa aacctgtaaa ggattgaccg gaaacaacaa agatcaaatt
     1441 ttgatcgcaa aggtcaaaat acaaacacca ggtgatcaat atctgaccaa tcaatcactt
     1501 gtgcttatct tttttttcat tttgttacat ctgtcataca aatataactg acagtgatta
     1561 tcattatacc cttatcagtt acgtaccatg actgatagtt ccccgttgta attaaatgct
     1621 atcccataac cacaactcag aaatatcgga gttcacgtat gaataaaatt tattcactga
     1681 aatatagtca tattacaggt ggattagttg ctgtttctga actgacccgg aaagttagtg
     1741 tcggtacatc aagaaagaaa gaaagttatc ctcggtatta ttttatcctc aatatatgga
     1801 agttatggtg aaacagcatt tgcagcaatg ctggatataa ataatatatg gacccgcgat
     1861 tatcttgacc ttgctcaaaa cagaggagag ttcagaccgg gtgcaacaaa tgttcaatta
     1921 atgatgaaag atggaaagat atttcatttt ccagaactac ctgtacctga tttttctgct
     1981 gtttccaaca aaggtgcaac aacatcaatt ggaggtgcgt acagtgttac tgcgactcat
     2041 aacggtacac agcatcatgc aataacaaca cagtcatggg atcagacagc atataaagca
     2101 agtaacagag tatcatctgg cgacttttcg gttcatcgtc tgaataaatt cgtcgtggaa
     2161 acaacagggg ttacggagag tgccgacttc tcactttctc ccgaagatgc gatgaaaaga
     2221 tatggcgtaa actacaacgg taaggaacaa ataattggct tcagagcagg tgccggaaca
     2281 acctcaacga tattaaacgg caaacaatat ctgtttggac aaaactataa tcccgacttg
     2341 ttaagcgcaa gtctttttaa tctggactgg aaaaacaaga gttacattta taccaacaga
     2401 acccctttta aaaactcacc aatttttggc gatagtggtt ctggttctta tctatatgat
     2461 aaagaacaac aaaaatgggt tttccatggt gttaccagta cagttggttt tatcagtagt
     2521 accaatatag cctggacaaa ctactcgtta tttaataata ttctggtaaa caatttaaaa
     2581 aagaatttca caaacactat gcagctggat ggtaaaaaac aagagttatc atcgattata
     2641 aaagataagg acctgtctgt ctcaggagga ggggaattaa cgctcaagca ggataccgat
     2701 cttggcattg gcgggcttat attcgataag aaccagacat ataaagtgta cggaaaagat
     2761 aagtcttata aaggtgccgg gatagatatt gataataata ccaccgttga atggaatgtt
     2821 aagggcgttg ccggagataa tctgcataaa ataggtagtg gtactctgga tgtaaaaata
     2881 gcacagggaa ataaccttaa aataggtaat gggactgtca tccttagtgc tgaaaaagcc
     2941 ttcaataaaa tttacatggc cggaggtaaa ggtacggtaa aaataaatgc caaagacgct
     3001 ttaagcgaaa gcggtaatgg cgaaatctat tttaccagaa atggcggaac actggatcta
     3061 aacggctatg accagtcatt tcagaaaatc gcagcaacag atgcgggaac aaccgtaacg
     3121 aactcaaacg tgaagcaatc aacattatca cttactaata ctgatgcata tatgtaccat
     3181 gggaatgtat caggtaatat aagcataaat catattatca atactaccca gcaacataac
     3241 aataatgcca atctgatctt tgatggctca gtcgatatca aaaacgatat ctctgtccgg
     3301 aatgcacagt taacattaca aggacatgcg acagaacatg ccatatttaa agaaggcaat
     3361 aacaactgtc caattccttt tttatgtcaa aaagactatt ctgctgccat aaaggaccag
     3421 gaaagcactg taaataaacg ttacaatacg gaatataagt ccaacaatca gatagcctct
     3481 ttttcccagc ccgactggga aagtcgtaaa tttaatttcc ggaaattaaa tttagaaaac
     3541 gcaaccctga gtataggccg gggtgctaat gtaaaaggac acatagaggc taaaaactct
     3601 caaattgttc tgggaaataa aactgcatac attgacatgt tctcaggaag aaacattact
     3661 ggcgaaggtt ttggattcag acaacagctt cgctccgggg attcagcagg cgaaagtagt
     3721 ttcaacggca gtctgagtgc tcaaaacagc aaaataactg ttggtgataa atcaactgtt
     3781 actatgactg gtgcattatc cttaattaat acagacctga ttatcaacaa aggagctact
     3841 gttaccgccc agggaaaaat gtatgtagat aaagctattg aactggccgg aaccctgaca
     3901 ttaacaggca cccctacaga aaataataaa tacagcccgg caatctatat gtcagatgga
     3961 tataatatga cagaagatgg tgccacgtta aaggctcaaa attatgcctg ggtcaatggt
     4021 aatataaaat cagacaaaaa agcatctatt ctgtttggtg ttgaccagta taaagaagat
     4081 aacctggaca aaaccacaca cacaccgctg gctacaggtt tgctgggtgg ctttgatact
     4141 tcttataccg gaggtattga tgctcctgct gcctcagcca gcatgtataa caccttatgg
     4201 agagtaaacg gacagtcagc cctgcaatca ttaaaaaccc gcgacagtct tttgttgttt
     4261 agtaacatag agaattcggg tttccatact gtgacagtaa acacactgga tgccactaat
     4321 actgctgtga ttatgcgggc tgatctgagc cagtctgtaa atcaatcgga taaactcatt
     4381 gttaaaaatc agttaaccgg aagcaataac agtctgtcgg tcgatataca gaaagtggga
     4441 aataataact caggattaaa cgttgacctg ataacagccc caaaaggaag caataaagag
     4501 atatttaaag ccagtactca ggccataggt ttcagcaaca tatctcctgt gatcagcacg
     4561 aaagaggatc aggaacatac cacgtggacc ctgaccggat ataaggtggc tgaaaataca
     4621 gcatcttcca gtgcagcaaa atcgtatatg tccggtaatt acaaagcctt cctgacagaa
     4681 gtcaacaacc tgaataaacg aatgggggat ctgcgtgaca ccaatggcga ggtcggtgca
     4741 tgggcccgca tcatgagcgg agcaggttca gcttctggtg gatacagtga caactacacc
     4801 catgtgcaga ttggtgtgga taaaaaacat gagctggatg gacttgacct tttcactggt
     4861 ctgactatga cgtataccga cagtcatgcc agcagtaatg cattcagtgg caagacgaag
     4921 tccgtcgggg caggtctgta tgcttccgct atatttgact ctggtgccta tatcgacctg
     4981 attagtaagt atgttcacca tgataatgag tactcagcga cctttgctgg gctcggaaca
     5041 aaagactaca gttctcattc cttgtatgtg ggtgctgaag caggctaccg ctatcatgta
     5101 acagaagact cctggattga gccgcaggca gaactggttt atggggccgt atcaggtaaa
     5161 cggttcgact ggcaggatcg cggaatgagc gtgaccatga aggataagga ctttaatccg
     5221 ctgattgggc gtaccggtgt tgatgtgggt aaatccttct ccggtaagga ctggaaagtc
     5281 acagcccgcg ccggccttgg ctaccagttt gacctgtttg ccaacggtga aaccgtactg
     5341 agtgatgcgt ccggtgagaa acgtatcaaa ggtgaaaaag acggtcgtat tctcatgaat
     5401 gttggtctca acgccgaaat tcgcgataat cttcgctttg gtcttgagtt tgagaaatcg
     5461 gcatttggta aatacaacgt ggataacgcg atcaacgcca acttccgtta ctctttctga
     5521 taacagcccg ggccgcgttt gcggcccttc ttctaccgga gagaatatgt attaccctgt
     5581 gacagactat atcgctcttg ctctcattat tagctttctt tttctgacat tatttatctg
     5641 cctgttatgc cttaaacatg agcgaataaa aaaagaaact atcaggcaaa aaaaatgcac
     5701 atattctgga gcatggctgg aatgcaactg agttctcatg gttccgatac ggacagtata
     5761 acgaaacggg tatttacatc tcgatcgaga agaccattat cattacaatc accgtttctg
     5821 gtgggtgctt taaaaaagaa tacagcattg tctcccacat gctggtcact gacaccataa
     5881 cagaggccac cctgtacgaa aacgggctgt atacgcgcca catcagactc agtcgcccag
     5941 tatctgacag caaatacccc ttgccacccg gatctcagct cattaaaaat atgaccttac
     6001 gactgcgcct gcaggatcag caggaagaaa catccgtgac attatttcag ggaaaaatga
     6061 gtaccgacgg aaataactat tacatcatca aaggtaaagt aagctcagta cttctgttat
     6121 taaaaatgct gcagattaat cacgcctgat ctctgtcccg gtattttagc ccgaggtata
     6181 ttctgaaata tcattcatca tgaccggcgt ttatacaaac gccggtcatt cgctaacagc
     6241 ttcaccgttc cttcccccat ccaggttccg catgagcgtg ttgtaatgtt cataagcgta
     6301 ttatcgtaag cttccgggga actcatattg acgcgttttt caggcgcgcg tcatcggcgg
     6361 cgcatacgaa cgatcgtggt ttgataacgg ttgatttatt ttgttgcaca ggggcgatcg
     6421 ctaggcaggt accggaggcg ggctctgaag tactgagtag ggtgatcgcg tcaggccgcg
     6481 aagtactgac tcggggatta atagcaggtg atgagtaagc gtacagcgag ggccgtattg
     6541 acggggatgt gttattcagc tggcagtgct atgcgccacg gaagcagttc gctgacccgg
     6601 ttgaccggcc agtctgctat gacgccaagc acatggcgaa ggtagctttc tggatccacg
     6661 tcattcagtt tgcacgtccc gatcaggctg tacagtagcg ctccccgctc accaccatgg
     6721 tcagagccga agaacaggaa gtttttacga cccagactga ccgcccgcaa ggcattttca
     6781 gcgatgttgt tgtcgatttc cacccagcca tcgttcgcat agtacgtcag tgccggccac
     6841 tggttaagtg cgtacgcgaa cgccttcgcc aactctgagt gtcgcgacag ggtcttcatc
     6901 ttttccgcaa ccagctttcc agggatttca acagcggttt cgtttttcgc tgacaccatg
     6961 gagggagtgg ttaaaagagc aacgagaaag tggtaattat aacgccagcc ggatatggcg
     7021 ggaaatggtg gcccggggat ttacaggcag tgaaaccatc gtcagggatg cggttgccaa
     7081 atggcgtaaa ggctggaacc caccggttac tactgccgtc agacttcctt cagtgtcccg
     7141 ggtaagccgc tggttgatgc cctggagaat aaccagggat gaagaaaatt atgcttcccg
     7201 atttattagt ctgatgtgtg aaaaagaacc tgagctgaaa atagcgcagc aactggcact
     7261 cgagttctac cgtattctga aaacccaaaa taaatcacag ctaagcagtt ggttcactcg
     7321 agtccacgaa agcggttcag cagaatttcg gcgcgtggcg gcggggatgg aagctgatgc
     7381 tgcagctata tgtgaggcaa tcagtagtcg ctggagtaat ggtgttgtcg aaggtcatgt
     7441 aaatcgcctg aagaagatgc tgaaacgcca gatgtatggt cgagcaggat ttgaactact
     7501 caggcagagg gtaatgagtc cactggcatg aaaatctcca cccaggttgc ggaagagcca
     7561 cttttcatcc gtcgttgaca gttat
//
LOCUS       DAJVUK010000180         7527 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.180, whole genome shotgun sequence.
ACCESSION   DAJVUK010000180 DAJVUK010000000
VERSION     DAJVUK010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7527
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.180"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..590
                     /locus_tag="OQQ57_003713"
     CDS             <1..590
                     /locus_tag="OQQ57_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707232.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1958309.1"
                     /translation="INQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALK
                     QAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNN
                     AVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKS
                     VAALITDIIDKPEKHIGENIGINQPVTDGDKPLFM"
     gene            900..1628
                     /gene="mpaA"
                     /locus_tag="OQQ57_003714"
     CDS             900..1628
                     /gene="mpaA"
                     /locus_tag="OQQ57_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HCS1958310.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
                     LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
                     AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
                     ACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDE
                     ASEKYLFAMANLLRWHPKDAIRPS"
     gene            complement(1603..2568)
                     /gene="ycjG"
                     /locus_tag="OQQ57_003715"
                     /pseudo
     CDS             complement(1603..2568)
                     /gene="ycjG"
                     /locus_tag="OQQ57_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707230.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
     gene            2687..3193
                     /gene="tpx"
                     /locus_tag="OQQ57_003716"
     CDS             2687..3193
                     /gene="tpx"
                     /locus_tag="OQQ57_003716"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HCS1958311.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAFGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            complement(3237..4778)
                     /gene="tyrR"
                     /locus_tag="OQQ57_003717"
     CDS             complement(3237..4778)
                     /gene="tyrR"
                     /locus_tag="OQQ57_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HCS1958312.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(4926..5987)
                     /locus_tag="OQQ57_003718"
     CDS             complement(4926..5987)
                     /locus_tag="OQQ57_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HCS1958313.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQHFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREICRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            complement(5984..7381)
                     /locus_tag="OQQ57_003719"
     CDS             complement(5984..7381)
                     /locus_tag="OQQ57_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HCS1958314.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
BASE COUNT         1860 a         2078 c         1813 g         1776 t
ORIGIN      
        1 tgattaatca actggcagat aaacaaacca ttaaacaaac tttatttgcc cgtcagccag
       61 caaaaatcca caaaccctat ccaactaata gcaagattat tatgggagat gtactgaatc
      121 atgcagcact gaagcaggcc atgcagggac aggacgttgt gtatgccaac cttacggggg
      181 aagatttaga tattcaggca aattcagtga tcgctgcgat gaaagcctgt gatgttaaac
      241 gtctgatctt tgttctttcc ctcggtattt atgatgaagt tccaggaaaa tttggcgaat
      301 ggaataatgc agttattggt gagcccctaa aaccattccg cagggctgcg gatgcaattg
      361 aggcttctgg actggaatat acaattcttc gccctgcctg gctgactgat gaagatatta
      421 ttgattatga gcttacctca cgcaatgaac cattcaaagg tacgatcgta tcacgtaaga
      481 gtgtcgcagc attaatcaca gatatcatcg ataaacctga gaaacacatt ggtgagaata
      541 taggtatcaa tcaacccgtg actgatggtg acaagccatt attcatgtaa atcaattaca
      601 tagttaccat cgtaatgtac tatgtgcagt acgatttatt aaacttatta aggtgaactg
      661 atcaatccga tgcgattaac atgtgtagaa ccagtaagaa taaaatacgc catgtatata
      721 acattacgac ttacatctaa gtcagcataa ttctaatatc tgcacatcaa taaaaatgca
      781 aacaacttcc ggcaaaaaaa gtgatacaag atcgatgaca tagcgttgaa gaaaaggatt
      841 tgataatccg caaaatttgc acaacactgc ctgtaatact tcctgaacca gagacgatca
      901 tgaccgtaac ccgcccacgc gccgaacgcg gcgcatttcc gcccggaaca gaacattacg
      961 gacgttcatt attgggcgcg ccgttaatct ggtttcctgc ccctgcagcc agccgcgaaa
     1021 gtggtttgat tctggctggc actcacggtg atgaaaactc ttcggtcgtc acgctctcct
     1081 gtgctctgcg gacgttgaca ccttctttgc gccgccatca tgtggtgctg tgtgtgaatc
     1141 ctgacggctg ccagctgggg ttacgggcca atgctaatgg tgtggattta aacagaaact
     1201 ttccggcggc gaactggaag gaaggtgaaa cggtttatcg ctggaacagc gccgctgaag
     1261 aacgtgatgt cgtattactg acaggtgaca aacctggctc agaacctgaa acccaggcgc
     1321 tgtgccagct tatacaccgc attcaacctg cctgggtggt ctcattccac gatccactgg
     1381 cctgtattga agatcccaga cacagcgaat taggcgaatg gctggcccag gcgtttgaat
     1441 tgcctctggt aaccagcgtc ggttatgaaa cgcctggctc tttcggcagt tggtgtgcag
     1501 atctcaactt gcattgcatc accgcagagt ttccgcccat ctcctccgac gaagccagcg
     1561 aaaaatatct ctttgcgatg gcaaacttgc tgcgctggca tcctaaagat gcaattcgcc
     1621 cgtcgtgaac tgaagcgccg gttccacatc taccgccagc caggtcggtc cgtcaagatc
     1681 ggcgaaactg acctgcggca ccagcggtaa agcggcgcta atggcacgag aggtacacaa
     1741 catgcagccc agcatcagac tgaaaccttg tgcacgcgct tcagtcgcca gcgccagcgc
     1801 ttccgtcaga ccaccggttt tatcgagctt aatgttaacc atctcatagc gccctttcag
     1861 cgccttcaga ttgctacgtg tatgacaact ctcatcagca caaatcggca acggatgaat
     1921 aaaattctcc agcgccgcat cgtcctgcgc aggaaggggt tgttcaagca tcgcaacgcc
     1981 taaatccgcc aatagctggc aacgcgccgc caacccttct gcacgccagg attcatttgc
     2041 atcaacgatc agcgtcgcat cgggcacagc tgtgcgaatt gccaccatcc gctcactaat
     2101 aagatggtta tccagcttca ctttcagtaa tttcgcgcct gcctgccaga gtgttgatgc
     2161 actattggcc atctgatcag gcgtaccgat gactaccgtc tgtgcagtga taactgtctc
     2221 gggaagcgtt atgccgatca aatcagccag cgattgctgc tgttttcgcg cggccagatc
     2281 ccacaatgca caatccagcg cattacgtgc tgcgccggca gggagaattt tttgcaactc
     2341 ctcccgtgtc agccctttct ctaattgcga cacgacgctc ataatttgcg ccattaccga
     2401 ggcatcactt tctccataac gcggatacgg cgtgcattcg ccggtgcctt taataccctc
     2461 ttcttccagt tcaaccacca ccacgcgcgc ttcactgcga cttccccggg caatcacaaa
     2521 cggggtatgt aagggctagg cttcctcaaa taccttaacg gttctcatct ttactccttg
     2581 ttgtcgcggt ggtctgcgga ttaagcgcaa atagcgtttg ctgtgttatt gacagttagc
     2641 ataaactagg tgtgacgtta actatatgta aacaggaaag ataatcatgt cacaaaccgt
     2701 tcatttccag ggcaacccgg ttacagtcgc caattccatc ccgcaggcgg gtagcaaagc
     2761 gcagactttt actctcgtgg caaaagatct gtctgacgtc accctcggtc agtttgcggg
     2821 taaacgcaaa gtgctgaaca ttttcccgag tattgatacc ggtgtttgcg ccgcatcagt
     2881 acgtaagttt aaccaactgg caaccgagat cgacaacacc gttgtgctgt gtatttctgc
     2941 cgatctgccg ttcgcccagt ctcgtttctg cggcgcagaa ggtctgaaca acgttatcac
     3001 cctctccact ttccgtaacg ctgaatttct gcaagccttc ggtgtggcaa ttgctgatgg
     3061 cccactgaaa ggtctggcag cgcgtgccgt tgtggttatt gacgaaaatg acaatgtgat
     3121 tttcagccag ctggtggatg aaatcaccac cgagccggat tacgaagcag ctctggctgt
     3181 actgaaagca taagttaata tgcctgatgg tgttgcacca tcaggcatat tcgcgcttac
     3241 tcttcgttct tcttctggct taagccatat tcccgcaact tattggcaat cgcggtatgt
     3301 gaaacgccga gacgttttgc cagtttgcgc gtgctgggat aattgcgata aagctgggtt
     3361 aataccgagc gttcaaaacg gctggtgatt tcgtccagcg aaccttccat cgcatcttcg
     3421 cccacggcta ccgttgcggc gtcataatcc ggcaacaaaa tatcctgtgg acgcagctca
     3481 taaccgtcca gttgtgtcag tgcgcgatat atagcgttct ttaactgccg cacatttccc
     3541 ggccacgcat aacgcgtaag tacagtattc aggtcagcgg ccagtttcgg acgcggcacg
     3601 ccctgctcgt cggcaaagcg ggcgacgaac agctcagtta acggcatgat gtcctgcgga
     3661 cagtcacgta gcggcggcag attgagcgtc aacacgttca gacgataata gagatcttca
     3721 cggaacatgc ctttttgcac cagttcgacc agattcttct gcgtagcgca aatcacccgc
     3781 acatcgacat gcacctcatg gtcttcgcca acccgacgga aagtgccatc attaagaaaa
     3841 cgcagtaatt tcgcctgcat ccgtggtgac atttccccta tttcatccaa cagcaccgaa
     3901 ccaccgttcg cctgctcaaa gaatcctttc ttcccttccg gagcatgacc aaacagttca
     3961 ctctcgaccg catcttccgg tatagacgca cagttcagcg ccaggtaagg tttgcccgct
     4021 ctggggcttg cctgatggca ggcgtaggca aagagatctt tacctgtacc tgtgtcaccc
     4081 gtaatcagca gcggcgcgct tagcatcgcc agtttctgcg cctgttcgac aacatgcttc
     4141 attttcgggc tgacggcgac aatttgactg aaggcgctga cgtcctgggc ggcgacattt
     4201 tgcaactggc ggcccatacg aatcgttgat cgcaacatca ccaccgcacc ggtcaggacg
     4261 tgttgatcat tttcatcctg aagataaaca ggcgtaatct ccatcaggaa attctgccca
     4321 ttaataacga catgctcgtt atgcgaatct tgcggttcgc tttccagcca acgtaaaaaa
     4381 ttaaagccgt taatcaattg tgcggcggta tggttgcgca ggcgatccaa tttttgccca
     4441 aaaagctgac agctcgccgg gttcgccata tccactttgc ttttcatatc gacagagagc
     4501 acaggttcgg gcaacgcctc cagtaacgcg ctcaacgcca gatgctcacg ttcggaaggc
     4561 atccacggga cagtacgcac atcggtaaca cctgcaatac ggcgtatttc ggccatcaga
     4621 ctgctgaaac tctcaaactc cagttcagca aaattgaggt agattcgccc aatgggatca
     4681 atctcaatac cgcgtaaatc aatgcctctt agcacgagta gatcgagtaa ttcgcgggtc
     4741 agaccgagtc ggtcttcaca aaagacttcc agacgcatgg gaaccttcac ctgaaaaaag
     4801 aacaattaat atgatgatat gacactattt ggatagcagg aaggtttctg tcaacaatca
     4861 ttgacacaaa gacggaaaaa cgggcacttc ggcgtaaaga tatccggtca gcacccgata
     4921 ttgcattatt tttcgctggg cgttttgcct ttttgcagcg tttctttcac ctgaccgata
     4981 agctgacgac ggaaatcccc gaggcgaggt ttgtcatcgt caatccacgg cagcgggcgg
     5041 caaagctcca tagctttaat cccgagtcgt gccgtcagaa gtccagcacc aattccctga
     5101 gctgcgcggg tagacaaacg agcagcgaga tcttgcgaca tccagtccat ccccacttcg
     5161 cgcaccagtt cgctggctcc ggcaaaagcg atattcagca ataccagctt aaacagacgc
     5221 aaacggctgt aataccccag ttcaatgcca tacagcgtgg cgatgcgatt aattaaacgc
     5281 agattgcgcc aggcgataaa cgccatatcg accaacgcca gcgggctgac cgcaatcatc
     5341 aacgttgatt ccgccgccga acggcagatt tcgcgccgcg cctgggcatc taaaactggc
     5401 tggaccaaat gcgcatacaa actgaccact tcacggtcgt tttgcgtttc atggattgag
     5461 gcataccagc gttgcagcgc tggatgagac tgatcaatac ccgcctgctg cgccagtttt
     5521 tcgcaaaatg cgcggccttt gcccgtgccg tggctgtgca acaaatcgcg cgcttcgtcg
     5581 cgttcatggg cgcgctgtcg caagcgccat aagcgccgcc actctgttac cacagaacct
     5641 acgccagcgc cgataatcaa tgccccagcg gcacatccac ccagcgccac ccagtcctga
     5701 gtttgccagg cattcattgt ccactgtaca ccctgcccga caacgcttgc gccaaacaga
     5761 gccagcccgc ccatcaccat tttgcgccac aggctgcgtt tcggacgtaa cgctgcatcc
     5821 attaccgctt caacttgccc ctcttcttca ggcgcttcat cgagcgtggc cggggcaaaa
     5881 tgttgcgcct gattttcgtc aaaggtctgc tgcgccctga attttggatt ctgatcgacc
     5941 tccagcggac cgtcgaaatc aatacgtggt tttaacggtt cggtcatcgc aatttatctc
     6001 ctattaaaaa ttccagcgcg gcatcaagac gaatatgcgg cagcggtttg tcgacatcca
     6061 tcacctgcgg gcgaaacgct tcaaactgga acccttgttt gtcccagaac gcctgaccgg
     6121 gcaaacgcgc aggaacttca ccgggataaa cggtgagtgg cgcaccatcg ctgagccggt
     6181 taccgcgcaa tgccggaatt ttctcgccgt tgacgtcaat aatgccgctg gtggtcgcct
     6241 gcaccgaggc cagccccagg caatccatac taatcccttc aaacgccgca ttttgccagg
     6301 catcctgaat cagttgttgc agtaatgaaa ccatattggc gtgctgatcg atggtcacat
     6361 ggtccgcttt agtggcagca aacaatagct tatcgataac cggcgaaaac aaacgccgga
     6421 acaaggtacg ctgcccgtag tggaaacttt gcatcagctg cgtcagtgcc agacgcatat
     6481 cattaaatgc ctgtggccca ctgttgagag gttgcaggca atcaaccagc acaatctggc
     6541 ggtcaaagcg cagaaaatga ttcttataga accccttcac caccttctcg cagtaataat
     6601 taaaccgctc gcgcagcatt ccggcattgg tgtgcttatc ggcctgcgcc agtttggact
     6661 cgccccaggt atcgacatcc ggccacggga agaattgcag cgcgggcgca cctgccatat
     6721 ctcctggcaa gacaaagcgc cctggctgaa taaagtgcag cccctgctgt ttacagtggt
     6781 ggagataatc ggtccacgcg gcggcaatgt ctgccagccg gttttcgtcg gcaggtgcta
     6841 gcgggtccag cccttcgcac atcattcgcc atttgaccga ccattcgccg cgctgaccat
     6901 tgagtaagcc cgtcatctgg cgtgaccagc ttaaatagtc ctgcgccagc atcggcaggt
     6961 cgagcaacca ttcgccggga taatccacaa tctccagata cagcgtggag gtgtccttga
     7021 agtggcgtag cagcgaatcg ttcgatttaa aacgtagcgc caggcggatt tcactgacgc
     7081 cgcgcgttgg cgtcggccag gcgggaggat cgccatataa ctgcgccagt ccttcatcat
     7141 atgtgaagcg cggaatgcca aagtcacgct gaggaatgcg ttttacgccc agcaggcgct
     7201 cttcacgcac cgcgcttaac agcggcaagc gtgctccggc gtgaatattg agcaactgat
     7261 tgaccatagc agtgataaac gctgttttgc cgctgcggct tagtccggtt acggcgaggc
     7321 gcagatgtct gtcgacaccc cgattcacca gcgcattaag ttcattttta agtcgcttca
     7381 ttgctgtcct gtgctgctct gaagaccaga aaaaaatcat tcgtaaggat atgaatgtgg
     7441 gggccaggcc attgattatc aactgcccgt gttgtcatcg acgggcgaac tccataagat
     7501 gtgcagcatt cacgttcgga cggagtt
//
LOCUS       DAJVUK010000181         7473 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.181, whole genome shotgun sequence.
ACCESSION   DAJVUK010000181 DAJVUK010000000
VERSION     DAJVUK010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7473
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.181"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..339
                     /locus_tag="OQQ57_003720"
     CDS             <1..339
                     /locus_tag="OQQ57_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCS1958315.1"
                     /translation="QTEAFLNAYGLSRFAPLGYDPRDLPIRDLAGYRKKGNHDGDPII
                     FYTFPAAFEQEIAKGFNTKQFAEVLKNAGMLTPPTSGRGYQGRVREDGRQIRVYVLNF
                     MAEESSQPEE"
     gene            714..1148
                     /locus_tag="OQQ57_003721"
     CDS             714..1148
                     /locus_tag="OQQ57_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000126714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCS1958316.1"
                     /translation="MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGE
                     STFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISA
                     RTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF"
     gene            1159..1800
                     /locus_tag="OQQ57_003722"
     CDS             1159..1800
                     /locus_tag="OQQ57_003722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958317.1"
                     /translation="MSTQPIIIEFGSYRWPRHLAIHEADHAIAAWFFGIQEVEIALSG
                     NNRVAKTYLSGDVDECGAVAVWHANYPRNVAEVKSYTLSNDDTRLRLIDQVCRAMVIS
                     LAGIVAQSRYTGDDINALMETSGKADMKNVRDLSEVYRVAGGEDADIQRISLSRAEAL
                     IALKWWDVIALAKILENRNHMPASNFQRIMGDIDKPVPKPMTLAELDELVGEE"
     gene            1797..2147
                     /locus_tag="OQQ57_003723"
     CDS             1797..2147
                     /locus_tag="OQQ57_003723"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958318.1"
                     /translation="MKPYILAAGLISSAPALSAIHCGGFTIQPDRYRTTINGDVVHIV
                     DAQFYGAPRDFSQAAIKLLPDAITTTDRQYRLETQGGNALLELMTRENPPRVLNRERC
                     DAGLTSFGWYTSAP"
     gene            2841..3452
                     /locus_tag="OQQ57_003724"
     CDS             2841..3452
                     /locus_tag="OQQ57_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958319.1"
                     /translation="MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGT
                     LYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCR
                     ACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD
                     RKRAELPVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL"
     gene            3990..4532
                     /locus_tag="OQQ57_003725"
     CDS             3990..4532
                     /locus_tag="OQQ57_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HCS1958320.1"
                     /translation="MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEH
                     LYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVI
                     VLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
                     DIERRVYDLSSINDRLQTLN"
     gene            complement(4525..4884)
                     /locus_tag="OQQ57_003726"
     CDS             complement(4525..4884)
                     /locus_tag="OQQ57_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958321.1"
                     /translation="MRMTSRKKEILSYFEPDNLEWVTGEIGAPPFDVSGVAYLLHGMV
                     SFDKRHQLESTRRTLESMVAGGLLERVTVYESRQIRRGGETNATVVRYGLPGQCAVMR
                     DTGGADNAISGEYMRVS"
     gene            5318..6142
                     /gene="dinD"
                     /locus_tag="OQQ57_003727"
     CDS             5318..6142
                     /gene="dinD"
                     /locus_tag="OQQ57_003727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HCS1958322.1"
                     /translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
                     RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAI
                     DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLK
                     RDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
     gene            6434..7051
                     /locus_tag="OQQ57_003728"
     CDS             6434..7051
                     /locus_tag="OQQ57_003728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HCS1958323.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(7048..7473)
                     /gene="ligB"
                     /locus_tag="OQQ57_003729"
                     /gene_synonym="yicF"
                     /pseudo
     CDS             complement(7048..7473)
                     /gene="ligB"
                     /locus_tag="OQQ57_003729"
                     /gene_synonym="yicF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312549.2"
                     /note="this ligase is similar to LigA but it lacks the
                     C-terminal BRCT domain; catalyzes strand joining of nicked
                     DNA in the presence of a divalent cation and NAD+;
                     internal stop; incomplete; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
BASE COUNT         1997 a         1837 c         1909 g         1730 t
ORIGIN      
        1 cagacggagg cgtttttgaa tgcctatggg ctgagtcgat tcgcgccgct gggttatgac
       61 ccgcgcgatt tacccatccg tgatttagcc gggtacagga agaaggggaa ccacgacggc
      121 gacccgataa ttttctacac cttcccggca gcgtttgagc aggagattgc aaagggcttc
      181 aataccaaac agtttgccga agttctaaag aatgcaggaa tgcttacacc accaacgagc
      241 gggcgaggct atcaggggcg agtaagggag gatgggcgac agattcgcgt ctatgtactc
      301 aatttcatgg cagaggaaag cagccagcca gaagaataat tatttcttca catgcgtagt
      361 tttagtgttg tctcggttgt ctttgttgtc tcaatttgta attgagattg atttataagg
      421 attttatttt aatttctgag acaacaccga gacaacattt agccattttg agacaacagg
      481 gcgaaagtgt gtttttagtc tggcaggcag tgagacaaca tttatgccgg gtgagacaac
      541 acgaaattgc aaatgttgtc tcagcaaaac ccagacgtgg cgcggcctgt agagccgtga
      601 gacaacaaag acaacagaga caacactatt tttgcttact atgaaaaaaa atcggcaggt
      661 gtcccacatt aagaaatcgt cattagcaaa actaataatc cagtgagggg aaaatgacag
      721 cacaaatttc agcatacggg cggctggtgg cagatcccca gacccgcacc acaacgaacg
      781 gtaacaacat ggctatggcg cggctggcgg tgtctctccc ctgtaatgcg gcagaggcgg
      841 gagagtcaac cttctggctg ggcgttattg cttttgggaa gcaggccgat gcgctggcaa
      901 agcaccagaa aggcgacctt gtgagcgtgg caggcaatat gcaactcaac cagtggacag
      961 ggcaggacgg cggtacacag caggggtatc aggtagtagc cgacagtgtg atcagcgcca
     1021 gaacggtacg ccccggcggg aaggcaggac agcggggaca ggcaacggac gcgctgagac
     1081 gtgcgcagca gccatcccgt gatgaatacg accaacgccc accattcgac gatgaaacgc
     1141 cattctgaga gggaagatat gagtacgcaa cccatcatta ttgagttcgg cagctatcgc
     1201 tggcccagac atcttgcaat acatgaagca gatcatgcga tagccgcatg gtttttcggc
     1261 atacaggagg tagaaattgc gttatcgggt aataaccgag tggcaaaaac ctaccttagc
     1321 ggcgatgttg atgaatgtgg agctgtcgcg gtatggcacg ccaactatcc acggaatgtg
     1381 gctgaggtta agtcttacac cctctcgaat gatgacacca ggttacgtct gatagaccag
     1441 gtatgccggg ctatggttat ctctctggct ggtatcgtcg cgcaatcacg ctatacgggg
     1501 gatgatatta acgcactgat ggaaacgtcc gggaaagcag acatgaaaaa tgttcgtgat
     1561 ttatcagagg tataccgggt ggctggtggg gaggatgctg atatacagag aatatccctt
     1621 tcccgtgctg aggcgctgat tgccctgaaa tggtgggatg ttatcgcgct ggcgaaaata
     1681 ctggagaacc gtaaccatat gcctgccagc aacttccagc gcattatggg tgatattgac
     1741 aagcctgtac caaagcctat gacgctggct gaactggatg aattggtggg tgaagaatga
     1801 agccatacat tctggcagcc ggcctgatct cctcggcacc ggcactatct gctatccatt
     1861 gtgggggctt taccatacag ccagaccgtt atcggacaac gattaacggc gatgtggttc
     1921 atattgttga tgcgcaattt tacggcgcac cgcgagactt tagccaggcc gccataaagt
     1981 tattgccgga tgccattacc actaccgata ggcaataccg cctagagacg cagggaggca
     2041 atgccttgct tgagttgatg accagagaaa acccgccacg tgtgcttaat cgtgagcgct
     2101 gcgatgccgg gttaacaagt ttcggttggt acacttctgc gccgtgatgt tcgttccgag
     2161 cgcagcctaa aatattggac tgttcttgac ggatttaaaa ctctaatgga gccaagtcct
     2221 tgccagtagc gggctaggag cctaattgtg attcaggtcg tcaaaaatat tcaggtttgc
     2281 ggcattggtt cgcagtacgc agtccggtac gcggcaaaac tgcgcattta acgtgcgtac
     2341 cacctgacga attctaacgc cggcattgca aacagatgcg tgcgcaaaat ggctaagacg
     2401 tctgatattg ctggctttgg ctcaatcagt ttggaggtgg cggtatcagt acgatgctaa
     2461 tttttgctaa ggttttagta cgcaactcag gtacgcactc tcaccagata cgaaaccgat
     2521 tcgcagttgc gtaccagcct gtaaggcgca ttatcgctgg gtttctacag tcgaatgcag
     2581 tacgcaaagt ggaaaatcct ccgaatacga aacccgagca ttgcgcagta aattgcgaat
     2641 tgcgcagtta acaaaatatc tccgcaaaac gaaacggata tcaatgcgca aaccatcctc
     2701 aacccccgcg cggttactgg ctttattgat gtgaaattgc aaaattggtg cgcaatttac
     2761 agtaaaatac gcatattatt tcgtattcaa tttgcgcacc gttcgcagtt aatgcgcagt
     2821 aattcgcagg aggccagcca gtgagagaca gaacgcgcag ctataccacc gacctgcccc
     2881 gtatagggtt gccattcctt gcgaacatgc gtagcaggct ggcggatgct gaaccgggta
     2941 cgcagcttta tacccagacc gaaagcggaa cgttgtatgc cttccggcaa gccgacagct
     3001 acgccatgac aatcaacggc gtgacgcggg ctattcgcac cacaaccacg aaggccgggt
     3061 atggcgtccg ggaatggtac gcttgccccc actgtatgaa gcgggctgca aagctgtata
     3121 tcggcaagaa agacattggc tgccgggcgt gctggaaact tcactataaa agccagagtg
     3181 ccgacatact ggacaggatg cgcatgaaga tacgccagca gcgatgcgcg atatggggca
     3241 gcaatgacct tgccaataat ctgtttaatg acattcgcat gttcccaaaa ccaaagggga
     3301 tgcgctgggc tacgtttgac aggaagcggg cagagttacc agttatggag atggcttact
     3361 ggcaggcatt cagcccggta gtggacagaa tcacgggcgt tattgagcgt aaagcaggaa
     3421 aagcagccag aggcattggc ctgactctat aaaagcaaaa cgcccgcacg gggcgtcaga
     3481 gaacgggata gacttctgcg acaatttgca ttcgccgcca atatagcaag ccgtccacat
     3541 caagcaataa actatcaccg ggagggggag gccaaatctc tgcaatcctg agccttaagg
     3601 actgcccgcc ccatcgtttt ttcatacccg cgaaaaatga aatttaatcc gggcgtgttt
     3661 catccttcca gagggtatga cgtatgacac cacgcgaaat agccttattg accatcgcca
     3721 aacttgagca tggaggccac cagcttacac aggcagatca acgggagata gaacgctcag
     3781 ttaatgccga tatagcccgg cgcgacaggt tccgcgaaat gatgcgagca cctgcctacc
     3841 agtggaagaa gccagcgccg cgcaggtaga tacgggatta ttccgcatgt aacttatgcg
     3901 tattaagcaa atttccttta ttcaccttta cagaattgtg agtacgtcag tatcgttatc
     3961 cttccgattc gcatttattc aggatttgca tgtaccagct aaagataacc atccgagaca
     4021 gcaaaccacc tatatggcgg cgtgtgctgg ttccagagca aatccccttt agtgaacttc
     4081 acgcggtgat ccagttggct tttggctgga atgacgaaca cctgtatatg ttcgagaaag
     4141 ggcgtaaagg tgatcccggt agcgagtatc gcgtatgggg tgaggatgaa agcatgggta
     4201 atgcggcaat cacaccacta tgggcagcgc tccagaatga tggtgacaag ctggtttaca
     4261 cgtatgactt tggcgactgg tgggattgcg tcattgtgct ggagaagcaa acacacgata
     4321 cgagcaatca gcccattagc tgcctgcgtg ggaaaggcac caccccggtg gaaaactcag
     4381 gcggcttgca tggttacaat gaattgctat tacaggccag agagtctgat aatcctgagc
     4441 aggccgagat ccacaatttc ctgatgctgg atattgagcg ccgggtttac gacctgagca
     4501 gcatcaacga cagattgcag actcttaact gacccgcata tattcgcctg atattgcgtt
     4561 atcagcgccg ccagtatcgc gcataacagc gcactgaccg ggcaaaccgt agcgcacgac
     4621 cgttgcgtta gtctcaccgc cgcgccgtat ctggcgcgat tcatacactg tcacccgctc
     4681 aagcagtcca ccagcaacca tgctttccag tgtgcgccgg gttgattcga gctggtgacg
     4741 cttatcgaac gacaccatgc catgaagcag gtaggccaca cccgacacat cgaacggcgg
     4801 cgcaccaatc tcaccagtca cccattcgag gttatccggt tcaaagtagc taagtatctc
     4861 ttttttgcgg ctggtcattc tcatagctgg caggttcctt attgtgggat agcactatca
     4921 tacaataagg cgcaaaagat aagaggccag aacagcaagc atgagagcat aaaacgagca
     4981 gccaaagaca gcgcctcaaa ataccgtgta cacaagggtg tacctactga gaaaacgcat
     5041 tacaagaaac acagcaacca cgggcgttta aagccactac tcaataaaca gattcaactc
     5101 gtaacgccaa ttcttacttt tcagccttca caaatgccgc ccactcaaac agagcggcat
     5161 ttttcttccc cgcaacttca attctgtttt gcgtgcctgc tccagatttt gcgatgtttt
     5221 tttgcccagc acactgagaa cgtgagatac tcacaactgt atataaatac agttacagat
     5281 ttactttctt tgcaatcgat atcacatgga gtgggcaatg aacgaacatc atcaaccttt
     5341 tgaagaaata cggcattatg gcactgaagg gcaagaattt tggtcagcta gagaattggc
     5401 accgttactg gattatcggg actggcgcaa ttttcaaaag gtactggccc gcgcgactca
     5461 agcgtgcgaa gccagcaatc aagctgcatc tgaccatttc gttgaaacca ccaaaatggt
     5521 tgtattaggt tcaggggctc aacgagaact tgaagatgtt catctctccc gctatgcctg
     5581 ttacctggta gtacaaaacg gcgaccctgc gaaaccggtt attgcggcag ggcaaactta
     5641 ttttgctatc cagacccgac ggcaggagct ggctgacgat gaagctttca ggcaacttcg
     5701 tgaagacgaa aagcgtcttt ttctgagaaa tgaattgaaa gaacataaca aacaattggt
     5761 tgaggcagcg cagcaagctg gggtagcgac agctatcgat ttcgccatat ttcagaatca
     5821 tggttaccgg gggctgtatg gtggattaga tcagaaagct attcatcagc ggaaggggct
     5881 gaaaaagaat cagaatatcc tggatcatat gggttcaaca gaactggcgg ctaatctctt
     5941 tcgagctacc caaacagaag aaaaactcaa gcgggatggc gtgaattcaa aacagcaagc
     6001 aaacaccaca cactttgacg tgggtcgcaa ggtgaggcaa accattcagg aacttggcgg
     6061 aaccatgcct gaggagttgc cgaccccgca ggtcagcatc aagcagttgg aaaacagtgt
     6121 aaaaattaca gagaagaaat agcagaaact aaaaactctt tttcttaatt gagatacccg
     6181 atgcgtaagc caaagtccag gtgcagtgaa cacaatggct aaacattgca cctttctttt
     6241 ccacccctca attttaacct attttttctt atgcattttc tcagacaaga actcagaata
     6301 atgcatctac gctacagaaa atagcgattt cacataacta caagttatca atttcctctt
     6361 accttaaaaa atctcaatcg tgacaatgcg cacaaatcgc taccctgcca gacagatttt
     6421 tagggagaga accatgctgt tacacatttt gtatttggtt ggcatcactg ccgaagccat
     6481 gacgggggcg ctggcggccg gacgacggcg catggataca tttggcgtaa ttattattgc
     6541 gaccgccacc gcaattggcg gagggtcagt gcgcgatatt ctgctgggcc actatccgct
     6601 cggctgggtc aaacacccgg aatatgtgat tatcgtcgct accgccgcag tactcaccac
     6661 tatcgttgct cctgtaatgc cttacctgcg caaagtgttt ctggtgctcg atgcgctcgg
     6721 actggtggtc ttttctatca tcggcgcaca ggttgcactg gatatggggc acggcccaat
     6781 tattgccgtt gtcgcggcgg taaccaccgg cgtgtttggc ggcgttttgc gcgatatgtt
     6841 ctgtaaacgc atcccactgg tattccagaa agagttgtat gctggtgtct catttgcctc
     6901 cgccgtgctg tacatcgcgc tgcaacacta tgtttctaac catgatgtgg tgattatctc
     6961 caccctggta ttcggctttt ttgcccgctt actggcgcta cgtcttaagc tgggattacc
     7021 ggtcttttac tacagccacg aaggtcacta aggttcaaaa cctgtgatct gctgggcagc
     7081 cagccaactg cccagcttct tgatttgcgc attttccttc cattcaataa cctgtctggc
     7141 gcgcccagat ccagtccccg gcagctgctg tcagaactgc tccgtgctaa ataaaagttg
     7201 cgactaggac cgttcatcac tggcattaag cgccgcccgg gttagcggta ttcccattgc
     7261 catcacccag cgagtaaaag gctgcttacg agccagatta aactgatgcc ataactgcgc
     7321 acttttactt ttcgcgatcc ccggcgtgtt ctgtaattgc tctggcgtta ataaaagcca
     7381 agaaaagata tgctcaaagc gatgagtctg atgcagcgcg cgccaaccgg cctcaccaat
     7441 gccatccagc ccaagaacct gttttgaccc cag
//
LOCUS       DAJVUK010000182         7436 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.182, whole genome shotgun sequence.
ACCESSION   DAJVUK010000182 DAJVUK010000000
VERSION     DAJVUK010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.182"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            168..275
                     /locus_tag="OQQ57_003730"
     CDS             168..275
                     /locus_tag="OQQ57_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958324.1"
                     /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG"
     gene            complement(328..1086)
                     /locus_tag="OQQ57_003731"
     CDS             complement(328..1086)
                     /locus_tag="OQQ57_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HCS1958325.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVTYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            1373..2302
                     /gene="pfkB"
                     /locus_tag="OQQ57_003732"
     CDS             1373..2302
                     /gene="pfkB"
                     /locus_tag="OQQ57_003732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HCS1958326.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISASQKQG
                     IRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            2403..2693
                     /gene="ghoS"
                     /locus_tag="OQQ57_003733"
     CDS             2403..2693
                     /gene="ghoS"
                     /locus_tag="OQQ57_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HCS1958327.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
     gene            2799..3659
                     /locus_tag="OQQ57_003734"
     CDS             2799..3659
                     /locus_tag="OQQ57_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HCS1958328.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
                     QQSLDRLLAA"
     gene            complement(3700..4236)
                     /locus_tag="OQQ57_003735"
     CDS             complement(3700..4236)
                     /locus_tag="OQQ57_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YniB family protein"
                     /protein_id="HCS1958329.1"
                     /translation="MTYQQAGHIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
     gene            4383..5051
                     /gene="hxpB"
                     /locus_tag="OQQ57_003736"
     CDS             4383..5051
                     /gene="hxpB"
                     /locus_tag="OQQ57_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HCS1958330.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
     gene            5214..5804
                     /locus_tag="OQQ57_003737"
     CDS             5214..5804
                     /locus_tag="OQQ57_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1958331.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQIINTLQIQFHRLIKHQVEY"
     gene            5937..7328
                     /gene="tcyP"
                     /locus_tag="OQQ57_003738"
     CDS             5937..7328
                     /gene="tcyP"
                     /locus_tag="OQQ57_003738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine/sulfocysteine:cation symporter"
                     /protein_id="HCS1958332.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHR"
BASE COUNT         1866 a         1810 c         1837 g         1923 t
ORIGIN      
        1 tattttcgat atatatgttg atgcataata ttattttttc ataaaacgca gaaacagtga
       61 ccaggtgtac aacgccaccc aacggctgta ataacaaaaa atcccttgat gcccgtccct
      121 tttgttacac tccgttatca cgcacaagag atatgcagga cactggtatg ccgactaaac
      181 gctttgataa aaaacactgg aagatggtgg tggtgctact ggcaatctgt ggcgctatgt
      241 tgttgctacg ttgggcagca atgatttggg gctgagcagt gacaaacgaa gacagccaga
      301 ccgcataaca cggtccggca gataatttta catgctgtag cccagcgata aggttgtccg
      361 acggtcggta tgttccggtg cagactctgg aggttcagag ttccatgtaa cgttgtaagt
      421 caccttcagt ccaaaatgtt cattaatagc aacatttaat gcgctttcgg agttcagcgt
      481 tgtgtcttcc gcgccaaaga ccgaaacacc ctgcgtaaat ttagcgttgt cagtcaactg
      541 ccatgcataa gccccggagg catagcccag cggctgagtt tcactggcat tgtcggtata
      601 tttgtcgtaa cgcacacctg gaccgaattc aaagcggaaa ctgtgtaccg ggccattcaa
      661 aaactgacga ccataacccg cggtcaacac atcgcgctct cgatagccgt tataacggtc
      721 tgtcagccag cttgcctgac caaataaata gtcataatca gttaaattaa agcggctacg
      781 cccgcccgcc gcatattttt ctgaagaacg ctcatcatta gaagaagtat tactggcgtt
      841 cccccacagc gaccaggcag tggtttgtcc ataccaggtc atggtggtgt cagccgtaag
      901 tgaggagctt ttcgtattgc ctgattgtgc aagatatcct gcgttcagat taccttcgaa
      961 aggtttttta gcgctggcag gatcgtccat gacagtaaaa acggaatcat cggcagctgc
     1021 attcagtgac gcaaacatgc cccccgccaa cataacgatg gcaggaactg tcttcaaaag
     1081 cttcatttat caagagtccg tacaacaaaa aaagagacca tcgcggtccc ggaaactttc
     1141 ttaaggatca aagattagcg tccctggaaa ggtaacgaat tataaaaagg cgcgaataac
     1201 ttagcaatgt attcttattt cattttttga ataagcatgt ggcgaaaaca gatttttatt
     1261 tatatatatt tatctgcaaa attttaaata aagctccaat aaatcatatt gttaatttct
     1321 tcactttccg ctgattcggt gccagactga aatcagccta taggaggaaa tgatggtacg
     1381 tatctatacg ttgacacttg cgccctctct cgatagcgca acaattaccc cgcaaattta
     1441 tcccgaagga aaactgcgct gtaccgcacc ggtgttcgaa cccgggggcg gcggcatcaa
     1501 cgtcgcccgc gccattgccc atcttggagg cagtgccaca gcgatcttcc cggcgggtgg
     1561 cgcgaccggc gaacacctgg tttcactgtt ggcggatgaa aatgtccccg tcgctactgt
     1621 agaagccaaa gactggaccc ggcagaattt acatgtacat gtggaagcaa gcggtgagca
     1681 gtatcgtttt gttatgccag gcgcggcatt aaatgaagat gagtttcgcc agcttgaaga
     1741 gcaagttctg gaaattgaat ccggggccat cctagtcata agcggaagcc tgccgccagg
     1801 tgtgaagctg gaaaaattaa cccaactgat ttccgcttcg caaaaacaag ggatccgctg
     1861 catcgtcgac agttctggcg aagcgttaag tgcagcactg gcaattggta acatcgagtt
     1921 ggttaagcct aaccaaaaag aactcagtgc gctggtgaat cgcgaactca cccagccgga
     1981 cgatgtccgc aaagccgcgc aggaaatcgt taatagcggc aaggccaaac gggttgtcgt
     2041 ttcccttggt ccacaaggag cgctgggtgt tgatagtgaa aactgcattc aggtggtgcc
     2101 accaccggtg aaaagccaga gtaccgttgg cgctggtgac agcatggtcg gcgcgatgac
     2161 actgaaactg gcagaaaatg cctctcttga agagatggtc cgttttggcg tagctgcggg
     2221 gagtgcagcc acactcaatc agggaacacg tctgtgctcc catgacgata cgcaaaaaat
     2281 ttacgcttac ctttcccgct aacaaaaaca ttcccccagc attgggggaa tcaccaccaa
     2341 cctgtcggca acgcgtttct ccgactatgc tcaaaagtca tgtgataaca aaggggtgaa
     2401 ctatggccag tggcgatctt gtccgttatg tcataaccgt catgttgcat gaggatacat
     2461 tgactgaaat taacgagttg aataattacc tgactcgcga cggttttttg ctcaccatga
     2521 cggatgatga gggaaatatc catgagctgg ggactaacac ttttggactt atcagtaccc
     2581 aaagtgaaga agaaattaga gaactggttt cggggcttac ccaaagtgca accggcaaag
     2641 atcctgaaat caccatcacg acctgggagg aatggaatag caacagaaaa taaatggttt
     2701 ttgggcaata atcagtctgt ggtgtgcgtt agctcgtgtt tttacaccgc attcttgcgc
     2761 taaccttatg atctggcaga caacatggga gagacatcat gtggcaggca atcagtcgtc
     2821 ttttgagcga gcagttaggt gaaggcgaaa tcgaactgcg taatgaactg cctggcggag
     2881 aagtccatgc cgcatggcat ttgcgctatg caggacatga ctttttcgtc aaatgtgatg
     2941 aaagggaact gcttcccggt tttaccgccg aagccgacca actggagtta ctgtcgcgta
     3001 gtaaaaccgt caccgtgcct aaggtttggg cagtaggcgc tgaccgtgac tacagttttc
     3061 tggtgatgga ttatctccca cctcgtccgc tggatgcgca tagcgcattt attcttggtc
     3121 agcaaattgc gcgtttacat caatggagtg accaaccaca atttggcctc gattttgata
     3181 actcgctctc cacaactcca cagcccaaca cctggcaacg tcgctggtca acgttttttg
     3241 ctgaacaacg gattggctgg cagttggaac tggcagcaga gaaagggatc gctttcggca
     3301 atatcgacgc catcgtcgag catattcagc agcgtctggc ctcgcatcaa ccgcagcctt
     3361 ctctgttgca cggcgattta tggtccggca actgtgcgct gggtccggat ggcccgtaca
     3421 ttttcgaccc tgcctgctac tggggtgacc gagagtgcga cctggcgatg ttaccgctgc
     3481 atactgaaca gccgccacaa atctatgacg gctatcagtc agtatccccg ctacctgccg
     3541 atttccttga acgtcaaccg gtttaccaac tctacacgct gttaaatcgt gcaaggttat
     3601 ttggcggtca gcatttggtt attgctcagc agtcactgga tagattatta gcagcatgat
     3661 atgggttgaa gataatggcc gctctgtgcg gccttttgat taaataaacc caagcagaga
     3721 aaagaacaca taacctgcag caatacaaat aaccggcagg atatacagtg agaaaaactg
     3781 caggaaaata gtatggtgcg gaacaacaat acgggactca atttgttcac gcgttagccc
     3841 ctcttcccct ttggcttttt ccagaatgag ttgatcttca acaccttccc gcaagaagcg
     3901 cgcctggcga ctcattcggg caccggaatc ctgcaacgcc agtccgacaa aaatcaggat
     3961 gaaaatcacc cagaacataa cgttcacgcc accattaaaa ttgggcgtcg gggagttata
     4021 ccagaacaga ttcaaaaaag gcgtattcgc ctgcatcata tcgatcatga catgagtaaa
     4081 gtcgagcatg accgcattaa tgccttcctg gttttcctgc cgggtattca taaatttcag
     4141 caaagaaatc aatgtagaga tcaatgcagg tataaaaatc acccaaccca aaatcctttt
     4201 caaaacagca atgtgtccag cttgttgata cgtcatgagt tctccttgat taagacgcgt
     4261 cgtttcactt agtttacctg tagatatctg ttttcgccca ttctttaaag gcgatatgat
     4321 aggcgcttaa tcataagcac ggcttaatac cttacacata atgctctaaa ggagaggttg
     4381 taatgtcaac cccgcgtcag attcttgctg caatttttga tatggatgga ttacttatcg
     4441 actcagaacc tttatgggat cgagccgaac tggatgtgat ggcaagcctg ggggtggata
     4501 tctcccgtcg taacgagctg ccggacacct taggtttacg catcgatatg gtggtcgatc
     4561 tttggtacgc ccggcaaccg tggaatgggc caagccgtca ggaagtagta gaacgggtta
     4621 ttgcccgtgc catttcactg gttgaagaga cacgtccatt attaccaggc gtgcgcgaag
     4681 ctgttgcgtt atgcaaagaa caaggtttat tggtgggact ggcctccgcg tcaccactac
     4741 atatgctgga aaaagtgttg accatgtttg acttacgcga cagtttcgat gccctcgcct
     4801 cggctgaaaa actgccttac agcaagccgc atccgcaagt atatctcgac tgcgcagcaa
     4861 aactgggcgt tgacccactg acctgcgtgg cgctggaaga ctcggtaaat ggcatgatcg
     4921 cttctaaagc agcccgcatg cgttccatcg tcgttcctgc gccagaagcg caaaatgatc
     4981 cacgttttgt attagcaaac gtcaaactct catcgctgac agaactcacc gcaaaagacc
     5041 ttctcggtta atgaccaggg gcagtgatca cgctgcccct ggttctttat ctgaatttgc
     5101 attcaactga cggattaatc gtcaatttaa gagaaagagt tacaccgtca ccacttccgt
     5161 gcactgtata aaaatcctat actgtacgta tcgacagttt agtgagtttt atcatgacgg
     5221 cggaaggtca ccttctcttt tctattgctt gtgcggtatt tgccaaaaat gccgagctga
     5281 cgcccgtgct ggcacagggt gactggtggc atattgtccc ttccgcaatc ctgacgtgtt
     5341 tgttaccgga catcgatcac ccaaagtcgt ttcttgggca gcgattaaaa tggatatcaa
     5401 aaccgatcgc ccgcgctttt gggcatcgtg gttttaccca cagtctgctg gcggtatttg
     5461 cgctgctggc aaccttttac cttaaggttc cggaaggctg gttcattccg gctgatgcgc
     5521 tacaaggaat ggtgctgggt tatttgagcc acatacttgc cgatatgctg acacccgccg
     5581 gtgttcccct gctctggcca tgccgctggc gtttccgctt gcctatccta gttccccaaa
     5641 agggcaacca actggaacgt tttatctgta tggcattatt tgtctggtcg gtatggatgc
     5701 cccattcatt acccgagaac agcgctgttc gttggtcatc gcaaataatc aataccttgc
     5761 agatccagtt tcatcggctt attaagcatc aggttgaata ctaaaaagac aaaaatcacc
     5821 tttctggaat aagcaattcc atttgaatat aagagccagc tcacagttct gttaatcttg
     5881 cgccaacact atgactgcta cgcagtgata gaaataataa gatcaggaga acggggatga
     5941 actttccatt aattgcgaac atcgtggtgt tcgttgtact gctgtttgcg ctggctcaga
     6001 cccgccataa acagtggagt ctggcgaaaa aagtgctggt gggtctggtg atgggtgtgg
     6061 tttttggcct tgccctgcat accatttatg gttctgacag ccaggtactt aaagattctg
     6121 tacagtggtt taacatcgtt ggtaacggct atgttcaact gctgcaaatg atcgttatgc
     6181 cgttagtctt cgcctctatt ctgagcgcgg ttgcccgtct gcataacgca tctcagttag
     6241 gcaaaatcag ttttctgacc atcggtacgc ttttgtttac cacgctgatt gcggcgctgg
     6301 tcggtgtgct ggtcaccaac ctgtttggtt tgacggctga aggtctggtt cagggtggtg
     6361 cagaaactgc acgtctgaac gccattgaaa gtaactatgt tggtaaagtc tctgatctga
     6421 gcgttccgca gctggtcttg tcctttatcc cgaaaaaccc gtttgccgat cttaccggag
     6481 ccaatccgac gtcaattatc agcgtggtaa tttttgccgc attcctcggc gtagctgcat
     6541 tgaaactgct gaaggatgat gcgccgaaag gtgaacgcgt cttagccgct atcgataccc
     6601 tacaaagctg ggtgatgaaa ctggttcgcc ttgtcatgca gttgacccct tacggcgttc
     6661 tggctctaat gaccaaagtg gttgcaggtt ctaacttgca agacatcatc aaactgggaa
     6721 gtttcgttgt cgcgtcctac ctcggtctgc tgattatgtt tgcagtgcat ggcattctgc
     6781 tgggcattaa tggcgtgagt ccgctgaagt acttccgtaa ggtatggcct gtgctgacgt
     6841 ttgcctttac cagccgttcc agtgctgcgt ctatcccact gaatgtggaa gcacaaacgc
     6901 gtcgtctggg cgttcctgaa tccatcgcca gtttcgccgc ctctttcggt gcaaccattg
     6961 gtcagaacgg ctgcgccggt ttgtatccgg caatgctggc ggtgatggtt gcgcctacgg
     7021 ttggcattaa cccgctggac ccgatgtgga ttgcgacgct ggtcggtatt gttaccgtta
     7081 gttccgcagg cgttgccggt gtcggtggtg gtgcaacttt cgccgcactg attgtgctgc
     7141 ctgcgatggg cctgccagta accctggtgg cgctgttaat ctccgttgaa ccgcttatcg
     7201 acatgggccg tacggcgcta aacgttagtg gctcgatgac agctggcacg ctgaccagcc
     7261 agtggctgaa gcaaaccgat aaagccattc tggatagcga agacgacgcc gaactggcac
     7321 accgttaatt cttatgctgg caatggtccg ttttgtatag gggccgttgc tttacttttt
     7381 aaatgttcca tcgcggcgat gcatactgac tcatatttaa acagatcgtc agcgaa
//
LOCUS       DAJVUK010000183         7409 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.183, whole genome shotgun sequence.
ACCESSION   DAJVUK010000183 DAJVUK010000000
VERSION     DAJVUK010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7409
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.183"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..1458
                     /locus_tag="OQQ57_003739"
                     /pseudo
     CDS             1..1458
                     /locus_tag="OQQ57_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            1469..2542
                     /locus_tag="OQQ57_003740"
     CDS             1469..2542
                     /locus_tag="OQQ57_003740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1958333.1"
                     /translation="MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSG
                     YLITANENKVGTTFNTTVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHS
                     NINYYDLNPNLDVGIAIDILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKA
                     IVYFYIKKTFAGKLIIPETKIVTLYGTISRDTPVDYSQPMANVYIRGDITAPQSCEIN
                     NLQPVYFDFKEIPAADFSSVVGSAVITHKITKTVTIECENLGILNTDDISTSFYATEP
                     NTDNSMVVTSNSNVGIKIYDKNNKEIKVNGGELPTDMGKSTVYGEKLGSVTFSAAPAS
                     LTGARPAPGQFTATATITVEIVR"
     gene            2790..3830
                     /gene="pstS"
                     /locus_tag="OQQ57_003741"
     CDS             2790..3830
                     /gene="pstS"
                     /locus_tag="OQQ57_003741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HCS1958334.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
     gene            3917..4876
                     /gene="pstC"
                     /locus_tag="OQQ57_003742"
     CDS             3917..4876
                     /gene="pstC"
                     /locus_tag="OQQ57_003742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HCS1958335.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            4876..5766
                     /gene="pstA"
                     /locus_tag="OQQ57_003743"
     CDS             4876..5766
                     /gene="pstA"
                     /locus_tag="OQQ57_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HCS1958336.1"
                     /translation="MAMVEIQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            5857..6630
                     /gene="pstB"
                     /locus_tag="OQQ57_003744"
     CDS             5857..6630
                     /gene="pstB"
                     /locus_tag="OQQ57_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HCS1958337.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            6645..7370
                     /gene="phoU"
                     /locus_tag="OQQ57_003745"
     CDS             6645..7370
                     /gene="phoU"
                     /locus_tag="OQQ57_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HCS1958338.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDSDK"
BASE COUNT         1863 a         1717 c         1933 g         1896 t
ORIGIN      
        1 agatgttgat gtcagcgtgg gtgaattgcg cgatgaagac ggatttacac cggacgtcct
       61 tcaggcgcaa atacttcatg gtttttccca cgggatcact ttatatggag gtatgcaggc
      121 tgctgaaaat tatggttctg cagctctggg tgtcggtaaa gatcttggcg ctttgggcgc
      181 aatttctttc gatgtgacac atgctcgtgc gaattttagc catgatgata cagaaacggg
      241 tcagtcatat cgctttctct attcaaaacg atttgacgac acagacacta gcttgcgcct
      301 ggttggctat cgttactcca ccgagggcta ctataccctc aatgagtggg catcgcggcg
      361 caacagccct gaagactttt gggaaacagg taaccgacgt agtcgcgtgg agggaacgct
      421 aacgcagtcg ttggggagag attatggcaa tttatacctg acattaagcc ggcaacaata
      481 ctggcatacc gatgatgtcg aacgattaat gcaatttggc tacagcagta gctggaagcg
      541 tctctcgtgg aacgtctcct ggagttattc caatactgcc agacagggga cggggaacaa
      601 ccatgccagt gataacacca gtgagcagat ctacatgctc tctttatctg ttcctttatc
      661 gggctggtgg ggtaatagtt acgccaccta ttctgtttcg caaaacgata attccggtag
      721 ctcacatcaa gcggtacggc gctggaaaga aataaccttt catggaattt aatgcagtcc
      781 tataacagtc atgatgatga ggttggcggt aatatgtccc tgacctatga tggctcttat
      841 ggcacggtga acggcagcta taactacagc caaaattccc agaggctgaa ttatggtatc
      901 agagggggaa ttctggcaca cagcgaaggg gtaacgttaa gtcaggagtt aggtgaaact
      961 attgctcttg ttaaagcacc tggggccgcc gggttagaaa tagataatat gcgcggtgct
     1021 gcgacggact ggcgcggcta tacggtcaag acacagctaa acccttatga tgaaaatcgg
     1081 gtagcaatca gcgataacta tttctcgaag tcgaatatag aacttgataa taccgtcgtt
     1141 acgatggttc ccacgcgtgg tgcagtggtt aaagcggagt ttgtgactca tgtgggttat
     1201 cgcgttctct tcagagtgtt aaatgcaaat ggtaaaccgg taccttttgg agccattgct
     1261 gcgatacaag atgcaagttt ggcagattca ggaattgtcg gtgaccgtgg cgaactttat
     1321 ctttctggtc taccagaaaa aggacaggtt acgttatcct ggggagaaaa cgcctcaaca
     1381 aaatgcatct tcaattattc actttcgaca ccagaaagtg agagcggatt aattgaacag
     1441 ggtgtgacat gtcattaaaa ggatttttat gaacaagtat atcaaacagt ggtgctttgc
     1501 tgtgtttatg ctctcgttaa gtagtgtagc acttgcagct cctaaaggta tctgtacccc
     1561 tgataatggc gtatttcaca gtacgcttga tttctcggga tatcttatta ccgcgaacga
     1621 aaataaggtt ggaacgacat ttaacaccac tgtaactaat ggatcctcat atcctggacg
     1681 ctgtcattgt gatactggta acgtaggaga attcccctat atctattata cgtcaaaaat
     1741 aaaccaggca ttaacttatg ctggggttca ctctaatatt aattattatg atcttaatcc
     1801 gaaccttgat gttgggattg ctatagatat tcttggggtt gggtatgtga atgcaccttt
     1861 tgaatatcat gctaacaacc cgtctggtaa tacaaagtac aattgcaacc gcattgaacc
     1921 tttaagtata tctagtgggg ctaaagcgat agtatatttt tatatcaaga agacatttgc
     1981 aggaaaattg attattcctg aaacaaagat agtgacattg tatggaacaa ttagccgtga
     2041 caccccggtg gattactcac agccgatggc taatgtttat attcggggcg atattacagc
     2101 tccgcaaagt tgcgaaataa ataatttaca gccagtttat tttgatttta aagaaatacc
     2161 agctgcagat ttttcatctg ttgttggaag tgcggtaata acacataaaa ttactaaaac
     2221 ggtcactatt gagtgtgaaa acctggggat actgaatacc gatgatatca gtacgtcttt
     2281 ttatgctacc gaacccaata cggacaattc aatggtcgta acttcaaact ctaacgtggg
     2341 gataaaaatt tacgacaaaa ataataagga aatcaaagtg aacggtggtg agttgccaac
     2401 agacatgggt aaatcaacag tgtatggtga aaaattaggt agtgtaactt tttcagctgc
     2461 tcctgcgagc cttactggag ctcgcccagc cccggggcaa tttactgcaa cagcgacgat
     2521 aactgttgag attgtgcgct aataggtctg acaacgattg ttcatcacat cgttgtcatc
     2581 tcacccattt ctttatcact tttaaatgca tcatgacaaa aagatgacat gtgggatttt
     2641 catcttcaca tttaaaatca gtaagttatt tggtaattcc tttctgtcat aaaaatgtca
     2701 tattccttac atataactgt cacctgtttg tcctattttg cttctcgtag ccaacaaaca
     2761 atgctttatg aatcctccca ggagacatta tgaaagttat gcgtaccacc gtcgcaactg
     2821 ttgtcgccgc gaccttatcg atgagcgctt tctctgtgtt tgcagaagca agcctgacag
     2881 gtgcaggtgc aaccttccct gcgccggtgt atgccaaatg ggctgacact taccagaaag
     2941 aaaccggtaa taaagttaac taccagggta tcggttcttc cggtggcgta aaacagatta
     3001 tcgctaatac cgttgatttt ggtgcctctg acgcgccgct gtctgacgaa aaactggctc
     3061 aggaaggtct gttccagttc ccgaccgtga ttggcggcgt ggtgctggcg gttaacattc
     3121 cagggctgaa gtctggcgaa ctggtgctgg atggtaaaac cctcggcgac atctacctgg
     3181 gcaaaatcaa gaagtgggat gatgaagcca tcgccaaact gaatccgggt ctgaaactgc
     3241 cttcacaaaa cattgctgta gtacgccgcg cagatggctc cgggacttcc ttcgtcttca
     3301 ccagctacct ggcgaaagtg aacgaagagt ggaaaaacaa cgttggtact ggctctaccg
     3361 taaaatggcc gatcggtctg ggcggtaaag gtaacgacgg tatcgccgcg ttcgttcagc
     3421 gtctgccggg tgcaattggt tatgttgaat atgcttacgc gaagcagaac aacctggcgt
     3481 acaccaaact gatctccgct gatggtaaac cggttagtcc gaccgaagaa aacttcgcta
     3541 atgcagcaaa aggtgcagac tggagcaaaa ccttcgctca ggatctgacc aaccagaaag
     3601 gcgaagatgc atggcctatt acctctacca cgttcattct gatccacaaa gatcagaaga
     3661 aaccagaaca aggcacagaa gtgctaaaat tcttcgactg ggcgtacaaa accggggcta
     3721 aacaggcgaa cgacctggat tacgccagcc tgccggatag tgtagttgaa caggttcgcg
     3781 ctgcgtggaa gaccaatatt aaagacagta gcggtaagcc gctgtactaa taaaactcca
     3841 ggccgggtac ggtgttttac gccgcatccg gcattacaaa atgactttgt aaacgcgttt
     3901 aactgaagag taacttatgg ctgcaaccaa gcctgctttt aacccaccgg gtaaaaaggg
     3961 cgacataatt ttcagcgtgc tggtaaaact ggcggcgctg attgtgctat tgatgttggg
     4021 tggcattatt gtctctctga tcatctcctc ctggccgagc attcagaaat ttggtctggc
     4081 tttcctatgg accaaagagt gggatgcacc gaacgatatc tacggggcgc tggtgccgat
     4141 ctacggtacg ttggtgactt cgtttatcgc gctgctgatc gccgtcccgg tgagtttcgg
     4201 tatcgccctg ttcctgactg agcttgcgcc tggctggctg aaacgcccgc tgggtatcgc
     4261 cattgagctg ctggcagcca ttccaagtat cgtttacggc atgtggggcc tgtttatctt
     4321 tgcgccgctg ttcgccgttt actttcagga gccggtcggc aatatcatgt cgaatatccc
     4381 gattgttggc gcgctgttct ctggccccgc atttggtatc ggtatcctcg cggcaggcgt
     4441 gatcctcgcc atcatgatta ttccgtacat tgcggcggta atgcgtgatg tgttcgaaca
     4501 aaccccggtg atgatgaaag agtcggccta cggtattggc tgcaccacct gggaagttat
     4561 ctggcgtatc gttcttccgt tcaccaaaaa tggtgttatc ggcggcatca tgctggggct
     4621 gggccgcgcg ctcggtgaaa ccatggcggt gacctttatc atcggtaaca cctaccagct
     4681 cgacagcgcc tcgctgtaca tgccgggcaa tagtatcacc tctgcgttgg cgaacgaatt
     4741 tgcggaagcg gaatccggtc tgcacgttgc cgcactgatg gaactgggcc tgatcctgtt
     4801 tgtgattacc ttcatcgtcc tcgccgcatc gaagtttatg attatgcgcc tggctaagaa
     4861 tgagggggca cgctaatggc tatggttgaa atccaaacca ctgcggcgct ggctgaatct
     4921 cgccgcaaaa tgcaggcgcg tcgccgcctc aaaaaccgta ttgcgctgac gctctcgatg
     4981 gcgacgatgg ccttcggcct gttctggctg atctggattt taatgtccac catcactcgc
     5041 ggtatcgacg gtatgtcgct ggcgctgttc actgaaatga cgccgccgcc caatacggaa
     5101 ggtggtggtc tggcgaacgc cctggcgggt agcgggctgt taattttgtg ggccacggta
     5161 ttcggtacgc cgctgggcat tatggcgggg atttatctgg cggaatatgg tcgtaaatcc
     5221 tggctggcag aagtgattcg cttcattaac gacattctgc tctccgcgcc gtcgattgtg
     5281 gttggtctgt ttgtttacac catcgtggtg gcgcagatgg agcacttctc tggctgggcg
     5341 ggcgtgattg ccctggcgct gttgcaggtg ccgattgtta tccgcaccac cgagaacatg
     5401 ctgaaactgg tgccggacag cctgcgtgaa gcggcttatg cgctgggtac accgaagtgg
     5461 aagatgatct ctgcgattac gctgaaagcg tcggtgtccg ggatcatgac cggtatcctg
     5521 ctggcgattg cccgtattgc tggtgaaacc gcgccgctgc tgtttaccgc gctctccaac
     5581 cagttctgga gcacggacat gatgcagccg atcgccaacc tgccggtgac gatctttaag
     5641 tttgcgatga gcccgtttgc ggaatggcaa caactggcct gggccggggt attgattatt
     5701 accctgtgcg tactgctgct gaacattcta gcgcgcgttg tttttgcgaa gaataaacac
     5761 ggttaacact ttgccggatg cggcgtgaac gccttatccg gcctacggta agcctgatta
     5821 gcgaagtgca tcaggcacga tgaggaaaag attgcaatga gtatggttga aactgccccg
     5881 agtaaaattc aggttcgtaa tttgaacttc tactacggca aattccatgc cctgaaaaac
     5941 atcaacctgg atatcgctaa aaaccaggtt acggcgttta tcgggccgtc cggctgcggt
     6001 aaatcgacgc tgctgcgtac cttcaacaaa atgtttgaac tgtacccgga gcagcgtgcg
     6061 gaaggtgaaa ttctgcttga tggcgacaac atcctgacca actctcagga tatcgcactg
     6121 ctgcgtgcga aagtgggcat ggtgttccag aaaccgacgc cgtttccgat gtccatctac
     6181 gacaacatcg cttttggcgt tcgtctgttt gagaagctct cccgtgccga catggacgag
     6241 cgcgtgcagt gggcattgac caaagccgca ttgtggaacg aaaccaaaga taaattgcac
     6301 cagagcggtt actctctctc tggtggtcag caacagcgtc tgtgtattgc gcgtggtatc
     6361 gccattcgcc cggaagtgct gctgctcgac gaaccgtgtt cggcgctcga ccctatctct
     6421 accgggcgta ttgaagagct gatcaccgaa ctgaagcagg attacaccgt ggtgatcgtc
     6481 acccacaaca tgcagcaggc tgcgcgttgt tccgaccaca cggcgtttat gtacctgggc
     6541 gaattgattg agttcagcaa cacggacgat ctgttcacca agccagcgaa gaaacaaaca
     6601 gaagactaca tcaccggtcg ttacggttga ttcaggagtg cgttatggac agtctcaatc
     6661 ttaataaaca tatttccggc cagttcaacg ccgaactgga aagtatccgc acgcaggtga
     6721 tgaccatggg cggcatggtg gagcagcagc tttctgatgc aatcaccgcg atgcataacc
     6781 aggacagcga tctggcgaag cgcgtgatcg aaggcgacaa gaacgtcaac atgatggaag
     6841 tggcgatcga tgaagcctgc gtgcgcatta tcgccaaacg tcagccgacg gcgagcgacc
     6901 tgcgactggt tatggtgatc agtaaaacca ttgccgagct ggagcgtatt ggcgacgtgg
     6961 cggacaaaat ctgccgtact gcgctggaga aattctccca gcagcatcag ccgttgctgg
     7021 taagtctgga gtcgctgggc cgtcatacca tccagatgct gcacgacgtg ctggacgcgt
     7081 tcgcgcggat ggacattgac gaagcggtac gtatttatcg tgaagataaa aaagtcgatc
     7141 aggaatacga aggtattgtt cgtcaactga tgacctacat gatggaagat tcgcgtacca
     7201 ttccgagcgt acttactgcg ctgttctgcg cgcgttctat cgaacgtatt ggcgaccgct
     7261 gccagaatat ttgtgagttt atcttctact acgtgaaggg gcaggatttc cgtcatgtag
     7321 gcggtgatga gctggataaa ctgctggcgg gaaaagatag cgacaaataa ttcaccagac
     7381 aaatcccaat aacttaatta ttgggattt
//
LOCUS       DAJVUK010000184         7391 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.184, whole genome shotgun sequence.
ACCESSION   DAJVUK010000184 DAJVUK010000000
VERSION     DAJVUK010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7391
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.184"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..291
                     /locus_tag="OQQ57_003746"
     CDS             <1..291
                     /locus_tag="OQQ57_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCS1958339.1"
                     /translation="QDGQATLWLSVIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQ
                     NGETRQGWQVIADSVISARAARPGGNRRKTTGTQGNQPPAGGDDPYGDDISF"
     gene            302..574
                     /locus_tag="OQQ57_003747"
     CDS             302..574
                     /locus_tag="OQQ57_003747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HCS1958340.1"
                     /translation="MVHDRIAEELEAKGFYRRAAARWGEVMQLVETDKERHHITMRRL
                     ECSRKAQRAPEPPDNFGDLKKAVDRTYAEMGIDGAGDEIWRNYQDS"
     gene            700..924
                     /locus_tag="OQQ57_003748"
     CDS             700..924
                     /locus_tag="OQQ57_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309616.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958341.1"
                     /translation="MPMKFDEILKQRDKYHADNMETMSINDYRAFLETGALIEKDQHG
                     FVRCALSGEMLAVNPEQIDALIEFLKEIRD"
     gene            1176..1382
                     /locus_tag="OQQ57_003749"
     CDS             1176..1382
                     /locus_tag="OQQ57_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000796968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958342.1"
                     /translation="MAEEKKGGVSVYISPEIVEVLKQRHKKNYEAGVAAGLDPLMTPE
                     PSIGSLVRSYLLAALGMHKNYGGE"
     gene            1382..2437
                     /locus_tag="OQQ57_003750"
     CDS             1382..2437
                     /locus_tag="OQQ57_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HCS1958343.1"
                     /translation="MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFST
                     QNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRM
                     AGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYE
                     IDWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLR
                     SFKKFRELYDLSRGSESAAEMACKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYF
                     LEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIEDGDPAIEYVQTHSA
                     PQPVPADIRKFVTVKIG"
     gene            2449..2784
                     /locus_tag="OQQ57_003751"
     CDS             2449..2784
                     /locus_tag="OQQ57_003751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HCS1958344.1"
                     /translation="MDTPYIELFAGSQQVSTTLVHFAADAGVIQEFTPLMLVDNGEFK
                     PWDGQESGKAVYLTSYLVDTSKQKSAQCYKTGIFNIAAVNWPESVDTDAKKCAAFAGS
                     GVSVQPLAR"
     gene            2797..3210
                     /locus_tag="OQQ57_003752"
     CDS             2797..3210
                     /locus_tag="OQQ57_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HCS1958345.1"
                     /translation="MATNESIMALPLASKFKAEARAMADRGLSTYEAVYQLNKLEEQD
                     KPRADAIMALHEHKDYQPLLRAMANVPCIDVDTAKNILNMTIEQERPKVAPELTAAFE
                     NFMDMHSPQTVSAGMAYDGRNPGDDGDIDRILKTI"
     gene            3372..3806
                     /locus_tag="OQQ57_003753"
     CDS             3372..3806
                     /locus_tag="OQQ57_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958346.1"
                     /translation="MIDKACFVSQQEIAEHFKVNRTTIRAWTKQGMPYLNADRGKSGG
                     YHIGHTLLWSSGKSRLEAIRYHVETSALEKIMFARLLSSERDEYSSEETEHRFDEGLQ
                     IYGYSPEDVSKARNKMAGFLAGWRHAVSVRRASMEQSADTEQ"
     gene            4087..4368
                     /locus_tag="OQQ57_003754"
     CDS             4087..4368
                     /locus_tag="OQQ57_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958347.1"
                     /translation="MTEAEILGLIRRAGGISQQTDEQATQPDSVTAENYARVVAEVMR
                     RDGIQLNDVDMRNIRIRVLEMLAYNRRVALYRETEKITYHWKKPERLRR"
     gene            complement(5045..>7391)
                     /gene="yejO"
                     /locus_tag="OQQ57_003755"
     CDS             complement(5045..>7391)
                     /gene="yejO"
                     /locus_tag="OQQ57_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter YejO"
                     /protein_id="HCS1958348.1"
                     /translation="QYIEMNGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAAN
                     DPTIKGGRLIVEKDGITVLAAIEKGGLLEVKEGGLAIAVDQKAGGAIKASTRVMEAFG
                     INRLGQFEIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKK
                     AGGKLIVSTNALEVSGTNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILDEHA
                     TMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRANVWAGTMVNV
                     SVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVWAII
                     ADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNGNFY
                     MRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLGNAG
                     GVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRERL
                     GSVKSVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLF
                     FGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGA
                     TAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTR
                     ILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNHVKVNDDGKFNNDVAGTPGV
                     YQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF"
BASE COUNT         2005 a         1795 c         1801 g         1790 t
ORIGIN      
        1 caggacggac aggcgacgtt atggttatcg gtcatcgcat ttggcaaaca ggccgacttc
       61 ctggctaaac atcaaaaagg cgatgttgcc agcgtatccg gcacgatgca ggtaagccag
      121 tggaccggac agaacggaga aacgcggcag ggctggcagg ttatcgcaga cagcgtaatc
      181 agtgcccgcg cggcacgtcc aggcgggaac agacgcaaaa ccacaggcac acagggtaat
      241 cagccaccag cgggaggcga tgacccttac ggtgatgata tttcgttctg agggggtgac
      301 gatggtacat gaccgcatag cggaggaact ggaggcgaaa ggcttttacc ggagggcggc
      361 ggcgcgatgg ggtgaagtca tgcagctggt ggagacagac aaggaacggc atcacatcac
      421 gatgcgacgg ctggaatgtt caaggaaggc acagagggca ccggagccgc cggataattt
      481 cggagacctg aaaaaggcag tcgatcgcac ttatgccgaa atgggtatag atggtgctgg
      541 tgatgaaata tggcgcaatt accaggacag ctaatcaaac agccggagaa atccggcttt
      601 tttgcaccag ttgaaacggt atggcgcatt accgggtttt cgtcacggtc aggcatagtt
      661 actatctgaa acaaacagac acaacagagg aaaaaaacaa tgccgatgaa atttgatgag
      721 atattaaaac agcgtgataa ataccatgct gacaacatgg agacgatgag catcaatgat
      781 taccgcgcat tcctggagac gggcgcactg attgaaaagg atcagcatgg ttttgtgaga
      841 tgtgctctgt ccggtgaaat gctggcggta aatcctgaac agatagatgc attgatagaa
      901 tttctgaaag agatcagaga ctgatccagc acacagcaca catagccgga gcaatccggc
      961 ttttttgcgc ccaaaaaaag cccgataagg tcagagggtt cttatcgggc ttttgcatat
     1021 gaggtttttg gatgcactgg cgttcgtgat cgggataatc atttcataat ttgcaacata
     1081 actcaatatt attgcataaa atgcaattct gattataatc aggactggat aaacatccag
     1141 tcctgatttt tttagtcgaa gaggaatttc ttactatggc tgaagagaaa aaaggcggtg
     1201 tttcggtgta cataagcccc gaaatcgtgg aggtgctcaa gcagcgccac aaaaaaaact
     1261 atgaggctgg cgtggcggct ggactggatc cgctgatgac gccggagccg tcgataggtt
     1321 cacttgtacg ctcttattta cttgcggcgc ttgggatgca taaaaattat gggggtgaat
     1381 aatggcaggc aaagcaacgg cacttaacac taaccagctt tttatgtacc tgaatcgcgg
     1441 ggatattgcg gattttaaat tcagccctct gtttaccacg ctgtttttcc cgaacgtggc
     1501 gacattcagc acgcaaaaca tcatgctgga taccctggac attgaagaag tcaccatgtc
     1561 ggcgttttgt tcgcctatgg tgggtagcca ggttcagcgc gataaagggt acgaaaccag
     1621 cacaatcaaa cctggctaca tgaagccaaa gcacgaaatc gatccaacga aaaccatcat
     1681 gcgcatggct ggagaagatc cggcacagct taacgaccct acctatcgcc gtatgcgcct
     1741 gattactggc aacatgcgcc gccagataaa cgccattaag gcacgcgtgg aatggctggc
     1801 ggtgaatgcg gtaacgaccg gaaaaaacat cattgagggc gaaggcatag aacgctatga
     1861 aatcgactgg aagataccgg aaaaaaacat catagagcag tccgacggca aaaaatggtc
     1921 cgagcatgat aaagatattt acgatccaat ctatgacatc gaactatacg cagatcaggc
     1981 aggttgcccc gccaacgtca tgattatggg cgctgaggta tggcgcacgt tacgcagctt
     2041 taaaaaattc cgtgaactgt acgatctttc ccgtggttca gaatccgccg cagaaatggc
     2101 ctgtaaaaac ctgggcgaag tggtgagctt taaaggctat ctgggcgata ttgctcttat
     2161 tgtctattcc ggcaaataca ctgacagcga cggcaccgaa aaatatttcc ttgagcctga
     2221 tttgctggtc ctgggcaaca ccaacaataa agggctggtg gcctatggtg cgattatgga
     2281 tcaggaagcg gtaagaacgg gcgcaacgca aaacatgtac tacccgaaaa actggattga
     2341 ggacggcgat ccggcgattg agtacgtgca gacacacagc gcaccgcagc cggttccggc
     2401 agatattcgc aaatttgtta ccgtcaaaat tggttaacgg gggattatat ggacactcca
     2461 tatattgagt tatttgcagg cagtcagcag gtatcaacga cactggtaca ttttgccgct
     2521 gatgctggcg ttattcagga atttaccccg ctgatgctgg tggacaatgg cgagtttaag
     2581 ccgtgggatg gtcaggaatc tggcaaggct gtttatctga cttcgtacct cgtggacacg
     2641 tcaaagcaga aatcagcaca gtgttacaag acggggatat tcaatattgc cgccgttaac
     2701 tggcctgaga gcgtcgacac cgatgcgaaa aaatgcgccg cctttgcggg ttctggcgta
     2761 tccgttcagc cgctggcccg ataagcaggg ggaacgatgg caacgaatga aagcatcatg
     2821 gcgctaccgc tggcgagtaa atttaaagcc gaagcgcggg caatggctga cagaggttta
     2881 tcaacctacg aggccgtata tcaactcaac aaactggaag agcaggacaa gccgcgcgct
     2941 gatgcgatta tggcgcttca tgagcataaa gactatcagc cgctgttgcg tgcaatggca
     3001 aacgtgcctt gtatcgatgt tgatacggct aaaaacatcc tgaacatgac catagagcag
     3061 gaacgcccga aggttgcacc agagcttacc gcagcctttg aaaactttat ggacatgcac
     3121 agcccacaaa ccgtatcagc tggcatggca tacgatggca gaaacccagg cgatgacggc
     3181 gacatcgatc gcatactgaa aaccatctga gacaaggccg gagaaatccg gcttttttgc
     3241 gggtccttcc tggaattatg gcccgttacg gggcggcgac ctcgcgggtt ttcgctattt
     3301 atgacgtttt tccgtgaagg tgacaccacc accacttgat taatatttaa ccatgcagtt
     3361 aaggtaacat tatgattgat aaagcttgtt ttgtaagtca gcaggaaata gctgaacatt
     3421 tcaaggttaa cagaaccact attcgcgcat ggaccaaaca ggggatgccg tatcttaatg
     3481 cggatcgcgg aaagtctggc ggttatcaca tcgggcatac attgctttgg tcttcaggta
     3541 aaagccgtct tgaggccatc agatatcacg tagaaaccag tgcgctggaa aaaattatgt
     3601 ttgccaggct gctttcatct gagcgtgacg agtactccag tgaagaaaca gaacatcgat
     3661 ttgatgaagg tttgcagatt tacggctatt caccggaaga tgtgagcaag gcacgaaata
     3721 aaatggctgg ctttctggct gggtggcgtc atgccgtaag cgttcgccgt gccagcatgg
     3781 agcaatcagc cgatacagaa cagtaaagcc gataacttgt taatcactcg cagcaatgca
     3841 tgtgatttgt gcacactttc ggttaactgg ttcgatgtcc ggttttagtg tctgtttttt
     3901 gcgcatgtcc ggttcatgga aagcatgttt ttatattttt catatggtta acttgtagag
     3961 aaaccggaca tggatcccga aaaattttca taaatagtga aaacgcgcga ggtcgccgcc
     4021 ccgtaacggg tccataattc caggaaggac ccgacgacac cagacaatca gaacgatagg
     4081 tgcacaatga cagaagccga aatactggga ttaatccgcc gtgctggtgg aatcagccag
     4141 cagactgacg aacaggccac gcagccggac agcgtgacag ccgaaaatta tgcgcgtgtt
     4201 gttgctgagg tgatgcgccg tgatggtatc cagcttaatg atgtggatat gcgcaacata
     4261 cggatccgcg ttcttgaaat gctggcctac aatcgccgcg tggcactgta tcgggaaacg
     4321 gagaaaatta cataccactg gaagaagccg gagcggttgc ggcggtaact ggttgatatt
     4381 ttcgaaattc gccagcggcg aacattgggg aaaccagcct aacccgttga tattttcggg
     4441 aacctcaaat tgaggaggtc ggaaacataa cccgtcatat tctggatgct gataattacc
     4501 acgcagccca ttaaggccta acccgttgat tctttcggaa acagccattg gcgtaatccg
     4561 gcgcggtaac ttgctgaact taaagcaaag cgcaaaattg cgctggctgg tgggcatgat
     4621 gccgatatgg tgatccccat aacggaaata tccaccagca cggcaacggc agaatagcca
     4681 caacacagaa aaaccacgaa tatggggttt ttgttatggc atgggcatga tgaccgcccc
     4741 tgctctgaat ggtggaaatc accacgcaga tcatccacca gcttcgtttt tataaattaa
     4801 acatccggga aaatccgacc ctgaattgtg cattttttca gcaaatcatt ttagttatac
     4861 gtttggttat acggtttaaa agttgaatca tatacattat tttaaatcat gaagttacac
     4921 gctcaattaa actactctcg tgaaaatccc aagaaaaaac caacctttac ggttggtttt
     4981 tttatatctg caattaattt gataaacaga ccgtgacaca tcacagcctg tttattttct
     5041 gttatcagaa cgtccagacc actcccgcct gagtattcca cggcgattct acccctgcgc
     5101 cattgccata gctgactgac aaatgaccgc ttaacgtcgg ggtaaacgat gaccttatcc
     5161 cagcctgata aacgccaggg gttccagcca catcattatt aaatttgcca tcgtcattaa
     5221 ctttcacatg gttagaatcg gcgtattcct gacgtacggc ggctttcagc cagggttcca
     5281 gcgtcgtacc attttgcagg tccatgtgat agcttaccgc cgttcccgct tcagcgcgta
     5341 atatccgggt atttcccaca tcagcgcgca tgccgtttga taacgtgtag tcctgaccat
     5401 ctgtggtaaa gccggtaaag gccagatagg gtctaacact ccacaatccg tcaacccaac
     5461 ggaacccgct ctcaacatga gcacccgcgc cgttactatt gtaatcgcca aacgctgttg
     5521 ccccattact catcttgcca tggatggtgt tggcaaaacg gtcaactttc accaccccat
     5581 caacataggc accgttctga tgctcccaac cggcataagc ccccagggta tagctatcga
     5641 tattaccttt tccgccgcga tcaaaaccaa tatcagaatg agagtaacca aagaacaagc
     5701 cgcgaattgt actgctttct tcacgggaga aacggctatc gataccgagc gtcaggcccg
     5761 tcaatgtttg ctcaaaacca gctcccgcat cagtggtcac gttgttgcgg gtgttaattg
     5821 ccgaactcca catcgccgta tcgtaactaa cgctttttac gctaccaaga cgctcacgca
     5881 cggtgtccag ttctgcatca aataccagcg gttgtgcggc cgccatattc agcacatcag
     5941 tggttgaagg ggtaatttgc gcgcgattct ctgccaaact ccagctatgg ttgccattat
     6001 ccagcaaggt atattcatac gtaccgatat caacaacgcc tccggcattg cccaacgtaa
     6061 atgcagcatc accgccgccc gttgttacca gtgtaaggct atctcctgct gccgggctgg
     6121 caccggtgtc cgtcacgaat attttgaaat cacctgttgc ctgaccggtg acgttgagct
     6181 gatcgctctg atgattagcc atatcggtac gcatataaaa attgccgttt cccgacaggg
     6241 tattggtggt caacgtaatg aaattttccg cacttgccgt cactgatgaa cgagtcactg
     6301 gctcatccat cataatcaca tttgcgtcag acatcgcaag gttggctaag ttgaggaggg
     6361 tgttttggtt cgtcgtagtg atatcggcaa tgatggccca tacgctattt tcgagcgaaa
     6421 cgtccgcttt gctggtatcc acggcaccat gcgttctaaa agaagcgccc tcagaaacca
     6481 ctaccttacc caccaacata gcgggtgcat aatttatttg cggcttcatg acctcaagaa
     6541 tgccatcatt ccctctgact gacacgttaa ccattgtgcc agcccagaca ttagcgcggc
     6601 cattgttgat aaccatattt tcagagatgg ctttagagga atacgtgata cttccattct
     6661 ggtctgatcg accgagatca tataccgcat ttgcctgcac tttcgtacca gtatcctttc
     6721 ccagcgattg catagtggca tgctcatcaa ggatagtatc aatggcctgc gtgtcctcca
     6781 taacaatgag cccggaacca tcatccagtt cataattttt tgacacacca tcttttatac
     6841 taaattggcc tttactgttt gtaccactca cttccagcgc attcgttgag acaattaatt
     6901 ttccgcctgc ttttttatca acgccagttg cagtcccgcc atccataacc tccagtaagc
     6961 cgccactatc tacagtagta ttataagcga agtcattttc ttcaactcgc aaacttccgc
     7021 cgttttccaa cagcatattg ttagcaatac cattcttgat ttcgaactga ccgagacggt
     7081 ttattccgaa tgcctccatg acccgcgtgc ttgctttaat agcaccgcct gctttctgat
     7141 ctaccgcaat cgctaatccc ccctctttaa cctccagtaa tcctcccttt tcgatagcgg
     7201 caaggacggt aatcccatct ttttcaacga ttaagcgccc gcctttaatc gtgggatcat
     7261 tcgctgcgcc ataaacctgt agcacaccat tattgagggt agtctggttt gccgcgccac
     7321 ccatttgaac aatttgataa ccgtcattta atactgagta ttctgcggta ccattcattt
     7381 caatgtactg a
//
LOCUS       DAJVUK010000185         7185 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.185, whole genome shotgun sequence.
ACCESSION   DAJVUK010000185 DAJVUK010000000
VERSION     DAJVUK010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7185
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.185"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(816..1346)
                     /locus_tag="OQQ57_003756"
                     /pseudo
     CDS             complement(816..1346)
                     /locus_tag="OQQ57_003756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416483.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
     gene            complement(1689..2339)
                     /gene="zinT"
                     /locus_tag="OQQ57_003757"
     CDS             complement(1689..2339)
                     /gene="zinT"
                     /locus_tag="OQQ57_003757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HCS1958349.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
                     FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
     gene            complement(2596..3231)
                     /gene="msrQ"
                     /locus_tag="OQQ57_003758"
     CDS             complement(2596..3231)
                     /gene="msrQ"
                     /locus_tag="OQQ57_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HCS1958350.1"
                     /translation="MRLTAKQVTWLKVSLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(3232..4236)
                     /gene="msrP"
                     /locus_tag="OQQ57_003759"
     CDS             complement(3232..4236)
                     /gene="msrP"
                     /locus_tag="OQQ57_003759"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HCS1958351.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLTPVDKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(4345..4701)
                     /gene="hiuH"
                     /locus_tag="OQQ57_003760"
     CDS             complement(4345..4701)
                     /gene="hiuH"
                     /locus_tag="OQQ57_003760"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HCS1958352.1"
                     /translation="MVYAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTA
                     KTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYH
                     VPLLLSQYGYSTYRGS"
     gene            4872..5543
                     /gene="hprR"
                     /locus_tag="OQQ57_003761"
     CDS             4872..5543
                     /gene="hprR"
                     /locus_tag="OQQ57_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HCS1958353.1"
                     /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
                     YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
                     SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLA
                     SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
                     VAVKK"
     gene            5543..6901
                     /gene="hprS"
                     /locus_tag="OQQ57_003762"
     CDS             5543..6901
                     /gene="hprS"
                     /locus_tag="OQQ57_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     HprS"
                     /protein_id="HCS1958354.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDMLN
                     NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL
                     GQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDIASLGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSASYHYLNKHNVFRITLPQ
                     RN"
     gene            complement(7009..>7185)
                     /locus_tag="OQQ57_003763"
     CDS             complement(7009..>7185)
                     /locus_tag="OQQ57_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310732.1"
                     /note="Hsp31 stabilizes early unfolding protein
                     intermediates under severe heat stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HCS1958355.1"
                     /translation="HLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANAL
                     GKLAAQEMLAAYAG"
BASE COUNT         2016 a         1483 c         1624 g         2062 t
ORIGIN      
        1 aagcgtgctt tcccaatctg gggcaaatca cgtctgaatg acacctgaaa acaggtggtg
       61 gactcaagaa ggcttggaat attcttcttt aatgttatgt aattcattga tttttcgtgt
      121 acgattttaa gacatttttt ccaagaaaaa tttttaactc tttgattttt cgactctgta
      181 tcatcggtct cgaaaaccgg agtaggggca actctaccgg gggggcaaat ccccctctct
      241 ccgccacttt atcaatgact tatctcccga cttcccgcct tacttttcct aaacagaaca
      301 atcgtagaat attcttgaag ggttagatcg tcactgtttt ctgttcgata ctgtgacatt
      361 cagcacttga ttcgctatgg atctgacagg aagctttcga gcgaaaatgt gcagttattc
      421 agtcgttttc ttatcgctca ccattattct tttagacatt catcctatga aactgccgca
      481 aagttggtgg tgggaactga agttgcgtag agaaggggtc aataattgag tcaaaaaagg
      541 aacgcggccg tcagattaaa gccgcgggac aaagtccata atttccaaga gttgttgaat
      601 ttcccagctt ttttgaaagc ctttgtatca tactaacaag taaaaaaggt ttaaatacca
      661 aaattaacct gtatttttga taagtcttac cattgtacga tttacacagt ttctgctcct
      721 ccttgttgat agtggaaagg gtgcattgtg cacttgcgta aacatttatg acgcgttgat
      781 gtccatggtt cacatttcct tgtcagggga tcgacttatt tgcggcgagg catcattcgt
      841 aacagagtat tatctttctg aatgtagtga tgaaagagtg ctgcgccagc gtgagctgcg
      901 attaaaaagt aacctatatt tgcccaggtt tcgtgaatat tttatatcag tgctttaatt
      961 tcgctgtttg gggtaacaaa gggagacaca ttgaaaccaa ggaaactcca cgattttcca
     1021 ctgtaagcca tcaaagcaat ccccagcaga ggaagtgcaa ggaaggttat ataaagcatg
     1081 atgtgcatta gcgaagccgc tttcatttgc caggcaggtg gcggtggcac aatagaagga
     1141 tcactataac ggtgttttat aatcaggcgt gaaaacatta acacccaaac gaatataccc
     1201 gcattgtaat gtgtttctcg catcagcaga taagtactac tacctttagg aaaccagcca
     1261 cggagttcca tcgcggcata ggttattgca acgaaaagca gcgttatcca atgtaaataa
     1321 atttgagttt ttgagaatcg gttcattttt gtagctcctg taatttttac agtcaagcta
     1381 tcccacgaac cttaaaaatt ccttatacag atgtggtttt aagaatttgt tatttaaaaa
     1441 attgatagtg cacattgtaa ccagccaata taagcaatgg cgtgagcaca ggtatctttc
     1501 tctgttggcc gtattgtgta tggaatccgt tattggttaa ctcaatgcgg gttagcttat
     1561 taatatacag acacgtcata gtgatgagcg tgtctgtagc tagcttgcgt tcagtggcgt
     1621 ttgtggatgg accagtggca gttatgatga cttactaaag cggcatcgag gcgttatcat
     1681 gagaatactc aatgagacat catttcctcg accacttctt cgctactcaa ctgatatgga
     1741 taatacgttg gccagttttc catttcattt aataaagatt gctgtgaatc attacccata
     1801 aaaatgtgaa aatgagatga ttttcgtggt gcaattatat gatcgctaaa ttgtatatat
     1861 ttaggggctt tgctttcagg atctttacat tcgaataagt aacgaacgcc tttcttgcct
     1921 gatttatagg tgagtatttt gtatccatcg taatcatatt tacaggatgt tgtttcatta
     1981 tttctatgga attcaacaat gccgtcctca atgccaatca tctcgatatc tgttgcataa
     2041 cctttgtgat aataatcttt aatttcagca aatgttttag ttttatctgc atccgctttc
     2101 ttctgaaaga cggggtcaag tttgccactt tgcagtaaag gataaacgga ttgccagacc
     2161 ccatcccagt cactgagcgt tcggttttgt acattggcat catcaaaaac accattagca
     2221 gctttttgtt cgacctctgt taagggtttg ccgtgtgagt gatgaccatg cgaaaaggca
     2281 ggagcgctaa caataaagac acctaacgca acagccagtt tgtgaagacg aatcgccaaa
     2341 acagtttcct ccagagtcat tgtatatgat gtgtaatgtt atattgtaac atatggcaaa
     2401 atgcaacaac tcttaggaga tgagagcata gttttctcag gtgtacttat ctatcttatt
     2461 gaaataaaat gaattatatt gataatttga ggttgatgac aaacgaaaca taatctgatg
     2521 tgatctgcgt aggccggata gggcgctcgc gccgcatccg gcagggataa cgcgtacttt
     2581 gtcggcaata tgaagttata cagataattt gttgtgaacc tgcttgcgta accggttaaa
     2641 aagggaacgc aacttcttat accgtaaggc taaaagcagt acagccagcc cagcgtagat
     2701 gagcggctgc ggtgaaataa tcttcactga ccacagataa tgtattgggg ccaggatcgc
     2761 gacaagatag acgaaattat gcaactgttg ccagtgcttg ccgagttttc gctgcatcgc
     2821 ctgggttgaa gtaaacgcta aagcaagcaa aataacccag ctgataattc ctaacgttaa
     2881 ataaggccgg gtaattaact ccttgcctaa taacgccaga ttattcacgc ccagctccag
     2941 caatgcgtaa ctggttaaat gcagtgtcgc ccaggcaaag caccataagc ctaacaggcg
     3001 gcgagtgcgt atcaataacg gctgttttgc gtagcgtgcc agaggtgtga ttaacaaggt
     3061 cgccagcaaa aatttcagtg cagtgcgacc ggtaaaatgc tgaatatctt tcaccggatc
     3121 ggcacccagt ccaccgtgat tgatcgccca gaccagccag agaaacggca acaatccggc
     3181 aagatgcagg ctaactttca gccatgtcac ctgttttgct gtcagacgca ttcagaaatt
     3241 ctcccgcaaa tccaggccac gatacagcga tgccacctgg tcggcgtaac cattaaacag
     3301 tagcgttggc tggcgctgaa catcgaggat gccgcctgaa ccaataaatc gttcggtagc
     3361 ctgtgaccag cgcgggtgat caacatgcgg attaacgttg gcgtaaaaac cgtattcgtc
     3421 aggcgctgcc agattccagg tggttggcgg acgctcgcgg gtcagcttaa tactgactat
     3481 cgatttaatc cctttaaagc catatttcca cggcacaatc agtcgtaccg gcgcgccatt
     3541 ttgtggcggt aacgccttgc cataaacacc cacggtcatc agtgtgagcg gatgcattgc
     3601 ttcgtcgaga cgcaatcctt cgacataagg atatttcagc ccgccgccga taaagcggtc
     3661 ctgctggcct ggcatttgtt ccggtgcata aattgtttcg aaagcgacat acttcgcatt
     3721 gctggtgggt tcggcaagcg ccagcaattt gtgcagcgga aaaccaatcc acggcaccac
     3781 catcgaccat gcctccacgc agcgcatacg ataaatacgc tcttccagcg ggaagcgacg
     3841 ggttaaatca tcgtgatcga gggtcaatgg ttttgccact tcgccgctga ttttcagtgt
     3901 ccatggatcg gttttcaggc taccagcatt agcggcggga tcggctttat ccagcccgaa
     3961 ttcatagaag ttgttataac cggagacttt atctactggc gtcagtggca ggttattttg
     4021 ccaggcggca ggcttgctga actccagcgg ttttccggcg ggggcgggcg ggcgatcgtt
     4081 ccctttaaac cagctaagca gatcggcatg cgcagcgtga ggcaaagaaa gtgcagctgc
     4141 actgatgccc agtgctttta acacctgccg acgcttcata aagaataccg actcggccgt
     4201 aacatctgat tcttttaaaa attgattctt tttcataagc catcacactt ttttgtcgtt
     4261 agccagcaag agccgtttac tgttaatctg tcagggagtg tcctccctaa cagtagcaga
     4321 gatctgcttt tacatattta tgcattaact gccacgatag gttgaatacc catattggct
     4381 aagtaataaa ggcacatgat aatgctcgtt cactttatta atatgaaatt caacggggat
     4441 ctcagggaag aaactttcaa gattttgttt cttgaaatag tccccggttt taaatacgac
     4501 acggtaatcg cccgtagttg cagtttgctc gggccacagt gctttaattc gtccatcctt
     4561 atctgttttg gcggtattaa gttgtaacca gccgttatcc gccttctttt caagagtgac
     4621 tgtcacgtca gcagcgggtt ttccggtttg ctggttcaaa atgtgcacgc taagaatgtt
     4681 ttgttgtgcg gcataaacca aagaaggtaa tgaaaatgct gcaaataacg ctttaacatg
     4741 tttatatcct tgtcatgtga atgagttttg aggatagcga aaaagcggcc agggtaacct
     4801 tacagcagca ttacaatttt gtaatgaacc aggctgtttc tataacatat gatttatggc
     4861 atattatttt catgaagatt ttacttattg aagataatca aaggacccag gagtgggtaa
     4921 cgcaggggct ttccgaagcg ggttatgtca ttgatgccgt ttctgatggc agagatgggc
     4981 tttatcttgc gctgaaggat gattatgcat tgataattct ggatattatg cttccgggta
     5041 tggatggctg gcagatctta caaacgttaa gaacagcaaa gcaaacccct gttatttgcc
     5101 ttactgcaag ggattctgtc gatgacagag tcagagggct ggacagtgga gcaaatgatt
     5161 atctggtaaa acctttttca ttttctgagt tgctggcaag ggttcgggca caattaaggc
     5221 aacatcacgc tttgaattca acattagaaa tcagtggctt aagaatggac tctgtaagtc
     5281 aaagtgtgag cagggacaat atcagtatta cactgacgcg caaggagttt cagttacttt
     5341 ggctactggc ctccagagct ggcgaaatta tacccagaac ggttattgcg agtgaaattt
     5401 ggggaatcaa ctttgatagt gataccaata cggtggatgt cgccattcgc aggctccgcg
     5461 caaaagttga tgatcctttt cctgaaaagc taatcgccac aatccggggg atgggctatt
     5521 cattcgtagc ggtaaaaaaa taatgaaaag attgtctata accgtccgtt taaccttgct
     5581 ttttatattg ctgctgtctg ttgctggcgc tggaattgtc tggactctct ataatggcct
     5641 ggcaagtgag ttgaaatggc gcgatgatac aacactcatt aaccggacag cacagatcaa
     5701 gcagttgtta attgatgggg taaatccaga tacgttacct gtatacttta accggatgat
     5761 ggatgttagt caggatatct tgatcattca tggtgatggc atcaataaaa ttgttaaccg
     5821 gacaaatgtc agtgatgaca tgttaaataa catacctgct agtgagacaa tcagcgcagc
     5881 tggcatttac agaagcatta ttaatgatac tgagattgat gctttacgaa ttaatattga
     5941 tgaagtttcg ccatcattaa cggttactgt ggctaaattg gcttcagcta gacataacat
     6001 gcttgaacag tataaaatta atagcattat aatttgcatt gtcgccattg tactttgctc
     6061 agtattaagt ccgctgttaa tcagaacggg attacgagag atcaaaaagt tgagtggtgt
     6121 aacggaagcg ctgaattata acgatagccg agagcctgtt gaggttagcg cattaccgag
     6181 agaactaaaa cctcttgggc aggcgttgaa taaaatgcat caagccttag tcaaagattt
     6241 tgaacgccta agtcaatttg ctgacgatct cgctcatgaa cttagaacgc ccattaatgc
     6301 attactgggt cagaatcagg ttacgctcag tcaaaccaga agtatcgctg aatatcaaaa
     6361 aacaattgcc ggtaacattg aagagttgga aaatatttcg cggttaacag agaacatact
     6421 gtttcttgcc cgggcagata aaaacaatgt tttggtgaaa ctggactcgc tttctctcaa
     6481 taaggaagtc gaaaatttgt tggattatct tgaatatctt tcagacgaga aagagatttg
     6541 ctttaaggtc gagtgcaatc agcaaatctt tgcggataaa attttactgc aacgaatgtt
     6601 atcgaatctt attgttaatg ccattagata ttcaccagaa aaatcgcgta ttcatataac
     6661 cagttttctt gataccaacg gctatcttaa tattgatatc gccagtcttg gaacgaaaat
     6721 acatgagcct gaaaaactct tccgtagatt ttggcgggga gataattcgc gtcattccgt
     6781 aggtcaggga cttggtcttt ctttagtcaa agcgattgcc gaattgcatg ggggaagtgc
     6841 ttcatatcac tatctcaata agcataatgt gttccgaatt acgttaccgc aaagaaatta
     6901 acatagggct tcagtacgcc ataaattaac cgtgaaaaaa cgcagccacg tcgtgagtac
     6961 taacgcggct gcgattaatt atgcgcttac attcaaacgt aacagggatt aacccgcgta
     7021 agctgccagc atttcctgcg ccgccagttt acccaacgca ttcgctgcga aaggactgtc
     7081 gccggtgaga agtttacggt ccttatgtac tcgcccggtg atgtcgtcat taatgatgtt
     7141 catgcccatt ttcttcagct cttcgccgaa gtaccaggtg agatg
//
LOCUS       DAJVUK010000186         7057 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.186, whole genome shotgun sequence.
ACCESSION   DAJVUK010000186 DAJVUK010000000
VERSION     DAJVUK010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7057
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.186"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            41..247
                     /locus_tag="OQQ57_003764"
                     /pseudo
     CDS             41..247
                     /locus_tag="OQQ57_003764"
                     /inference="COORDINATES: protein motif:HMM:TIGR02601.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            992..2905
                     /locus_tag="OQQ57_003765"
                     /pseudo
     CDS             992..2905
                     /locus_tag="OQQ57_003765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001306477.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(3033..3755)
                     /locus_tag="OQQ57_003766"
     CDS             complement(3033..3755)
                     /locus_tag="OQQ57_003766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HCS1958356.1"
                     /translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     LTNTFKLGPGVDVNYMLHTQNK"
     gene            3902..6529
                     /gene="gyrA"
                     /locus_tag="OQQ57_003767"
     CDS             3902..6529
                     /gene="gyrA"
                     /locus_tag="OQQ57_003767"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HCS1958357.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
     gene            6678..>7057
                     /locus_tag="OQQ57_003768"
     CDS             6678..>7057
                     /locus_tag="OQQ57_003768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2138 family protein"
                     /protein_id="HCS1958358.1"
                     /translation="MSGEKKAKGWRFYGLVGFGAIVLLSAGVWALQYAGSGPEKTLSP
                     LVMHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE
                     GSIRRIVYEHDLTLKDKLFSSLLD"
BASE COUNT         1694 a         1743 c         2013 g         1607 t
ORIGIN      
        1 aggctatgga gatggtcctt ccactgcggc gggtggcttt atgtatctcg gcttaagtga
       61 agttaccttt gatattgccg acggaaaaac gctggttatc ggcaatacag agaatgacgg
      121 agctgttgac tctattgctg gtaccgggtt gatcaccaaa acaggttccg gcgatctggt
      181 acttaatgca gataacaatg actttactgg cgagatgcag attgaaaacg gtgaagttac
      241 cctgggccgc agcaactccc tgatgaatgt cggcgatacg cattgccagg acgatccgca
      301 agactgctac ggtctgacga tagggagtat tgataagtac cagaatcagg cagagctaaa
      361 cgttggctcc acccaacaaa cctttgtgca ctcattgacg ggctttcaga atggcacttt
      421 aaatatcgat gctggtggca atgttactgt taatcaaggt agttttgctg gcaccatcga
      481 aggtgctggt cagctcacca ttgcgcaaaa cggcagctac gtgctgtcgg gggcgcagtc
      541 gatggcgcta accggcgata tagtcgttga tgatggtgcg gtgctttcgc tggaaggcga
      601 cgcggcagat ctcgccgctc tccaggacga tccgcagtcg atcgtgttaa acggcggtgt
      661 gctcgatctc tctgatttct ccacctggca gagcggcaca tcatacaatg atggccttga
      721 agtcagtggc agcagcggaa cggttatcgg cagtcaggat gtggtagatc ttgcaggtgg
      781 cgacaatttg catatccgcg gcgacgggaa agatggcgtc tacgtggtgg tcgatgcgag
      841 cgacgggcag gtaagtctgg caaacaataa tagttatttg ggcacaacac aaatcgcctc
      901 cggtacgctg atggtgagcg acaactcgca gcttggagat acccactata accgccaggt
      961 tatctttacc gataagcaac aagaaagcgt gatggagatt actgccaatg tcgatactcg
     1021 ctctacgacg actgagcatg ggcgtgatat tgaaatgcgc gccgacggtg aagtggcagt
     1081 tgatgcgggg gtagacacgc agtggggcgc actgatggct gacagcagcg ggcagcatca
     1141 ggatgagggt agcacattta ctaaaacggg ggcgggtacg ctggagctga ccgccagcgg
     1201 tacaacgcag tcggcagtac gtgtcgaaga aggcaccctg aaaggcgatg ttgcggatat
     1261 ctttccttat gcttcgtcac tgtgggtcgg tgatggggcg acgttcgtta ctggcgcgga
     1321 tcaggatatt cagtctatcg atgctacttc cagcggcact atcgatatca gcgatggtac
     1381 ggttttgcgt ctgaccgggc aggatacttc cgtcgccctt aatgcctcat tgtttaacgg
     1441 cgatgggacg ctggtgaatg ctaccgatgg cgtgacgttg acaggtgagc ttaataccaa
     1501 ccttgaaact gacagcctga cctatcttgc cgacgtgacg gttaatggtg atctgaccaa
     1561 tacgtccggt gcggttagcc tgcaaaatgg cgtcgctggc gatacgctaa cggtaaacgg
     1621 tgattatact ggcggcggta cgctactgtt cgacagcgaa ttaaacggcg atgactcggt
     1681 aagcgatcaa ttggtgatga acggtaatac tgctggcaac acaactgtgg tggttaactc
     1741 cattacaggg attggtgagc cgacatcgac aggcattaaa gtggttgatt tcgcagctga
     1801 tcccacgcag tttcaaaaca atgcacagtt cagtctggct ggcagtggct acgtcaacat
     1861 gggagcgtat gactacacgc tagtggaaga taacaacgac tggtatctgc gatcgcaaga
     1921 agtaacgccg ccatcgccac ctgatccaga cccggaccca acacccgatc ctgacccaac
     1981 acccgatcca atccccgctt accagccggt gctgaatgcc aaagttggcg gttatctcaa
     2041 taacctgcgg gcggcaaatc aggcgtttat gatggagcga cgcgatcacg ctggtggcga
     2101 tggtcagacg ctgaatttac gtgttatcgg cggacgttat cattacacgg cggcagggca
     2161 actggctcag caggaagaca cttctacggt gcagcttagc ggcggcttgt ttagcgggcg
     2221 ctggggcacg gatggcgagt ggatgcttgg ggcggttggt ggctacagtg ataatcaggg
     2281 cgacagccgc tcgaatatga ccggaactcg cgccgataac cagaaccacg gttatgccgt
     2341 tgggctgacc tcaagctggt atcagcacgg taattagaag cagggggcct ggctggatag
     2401 ctggctgcaa tacgcgtggt ttaacaatga tgtttccgaa catgaagatg gcgtggatcg
     2461 ttaccattcg tcggggatta tcgcctcgct ggaagccggg tatcagtggt taccggggcg
     2521 tggtgtggtg attgaaccgc aggcgcaggt gatttatcag gacgtgcagc aggatgattt
     2581 taccgccgct aaccatgcgc gcgtgtcaca atcgcagggg gatgatattc agacgcggct
     2641 gggtttacac agcgaatggc gtaccgcggt tggtgtcaca ccaacattag atctgaatta
     2701 ttatcacgat ccccatgcga cggaaattga agaagatggc agcactatca gtgacgatgc
     2761 ggtgaagcga cggggtgaaa taaaagtggg agtcacgggc aatatcagtc agcgagtgtc
     2821 cctgcgcggc agcgtggcgt ggcagaaagg gagtgatgat tttgcccaga cggcagggtt
     2881 tttgtcgatg acggtgaaat ggtaatcact gtctagtcgg cacggttgcc ggatgcggcg
     2941 taaacgcctt atccggccta cggggagcat ttgtaggcct gataagacgc ggcaagcgtc
     3001 gcatcaggca ttggctcggc caaacaacaa cctcacttat tctgcgtgtg cagcatatag
     3061 ttcacatcca cgccggggcc gagtttaaaa gtattagtga gcgggttgta atgtagccca
     3121 gttatatgtc gctctttaag gcttgtctga tctacccagc caagcagttc tgccggttta
     3181 ataaacttct tcacatcatg cgtgcctttg ggcaccatgc gcaaaatata ttccgcgcca
     3241 accaccgcca tcagccatga cttgccgttg cggttaagcg tcgagaaaaa gacatcgccg
     3301 cctggtttca ccagttgcgc acaggctctg accactgact gcggatcggg gacgtgctcc
     3361 agcatctcca tgcaggtcac cacatcatac tgcccggcat gttttgccgc gtgctcttcc
     3421 acggtttcct gcacataatc cacctgaatg ccgctttcca gcgcgtgcag ttttgccacc
     3481 tgcaatggct caaagcccat atccagaccg gtcaccgtcg cgccttcgcg cgccatactc
     3541 tcggccagaa tgccgccgcc acaaccgaca tcgagcacct ttttgccaaa taaaccgcca
     3601 gcacgctcgg caatatagcc cagacgcagc gggttaatgc ggtgcaacgg tttgaactca
     3661 ccttcaagat cccaccagcg ggaggcgacg gcttcaaatt tagcgatctc ttcgtggtct
     3721 acgttatggt tttccggcga tttttcggca ttcattggca cttctactcc gtaattggca
     3781 agacaaacga gtatatcagg cattggatgt gaataaagcg tataggttta cctcaaactg
     3841 cgcggctgtg ttataatttg cgacctttga atccgggata cagtagaggg atagcggtta
     3901 gatgagcgac cttgcgagag aaattacacc ggtcaacatt gaggaagagc tgaagagctc
     3961 ctatctggat tatgcgatgt cggtcattgt tggccgtgcg ctgccagatg tccgagatgg
     4021 cctgaagccg gtacaccgtc gcgtacttta cgccatgaac gtactaggca atgactggaa
     4081 caaagcctat aaaaaatctg cccgtgtcgt tggtgacgta atcggtaaat accatcccca
     4141 tggtgactcg gcggtttatg acacgatcgt ccgtatggcg cagccattct cgctgcgtta
     4201 catgctggta gacggtcagg gtaacttcgg ttccatcgac ggcgactctg cggcggcaat
     4261 gcgttatacg gaaatccgtc tggcgaaaat tgcccatgaa ctgatggccg atctcgaaaa
     4321 agagacggtc gatttcgttg ataactatga cggcacggaa aaaattcccg acgtcatgcc
     4381 aaccaaaatt cctaacctgc tggtgaacgg ttcttccggt atcgccgtag gtatggcaac
     4441 caacatcccg ccgcacaacc tgacggaagt catcaacggt tgtctggcgt atatcgatga
     4501 tgaagacatc agcattgaag ggctgatgga acacatcccg gggccggact tcccgacggc
     4561 ggcaatcatt aacggtcgtc gcggtattga agaagcttac cgtaccggtc gcggcaaggt
     4621 gtatatccgc gctcgcgcag aagtggaagt tgacgccaaa accggtcgtg aaaccattat
     4681 cgtccacgaa attccgtatc aggtaaacaa agcgcgcctg atcgagaaga ttgcggaact
     4741 ggtaaaagaa aaacgcgtgg aaggcatcag cgcgctgcgt gacgagtctg acaaagacgg
     4801 tatgcgcatc gtgattgaag tgaaacgcga tgcggtcggt gaagttgtgc tcaacaacct
     4861 ctactcccag acccagttgc aggtttcttt cggtatcaac atggtggcat tgcaccatgg
     4921 tcagccgaag atcatgaacc tgaaagacat catcgcggcg tttgttcgtc accgccgtga
     4981 agtggtgacc cgtcgtacta ttttcgaact gcgtaaagct cgcgatcgtg ctcatatcct
     5041 tgaagcatta gccgtggcgc tggcgaacat cgacccgatc atcgaactga tccgtcatgc
     5101 gccgacgcct gcagaagcga aaactgcgct ggttgctaat ccgtggcagc tgggcaacgt
     5161 tgccgcgatg ctcgaacgtg ctggcgacga tgctgcgcgt ccggaatggc tggagccaga
     5221 gttcggcgtg cgtgatggtc tgtactacct gaccgaacag caagctcagg cgattctgga
     5281 tctgcgtttg cagaaactga ccggccttga gcacgaaaaa ctgctcgacg aatacaaaga
     5341 gctgctggat cagatcgcgg aactgttgcg tattcttggt agcgccgatc gtttgatgga
     5401 agtgatccgt gaagagctgg agctggttcg tgaacagttc ggtgacaaac gtcgtactga
     5461 aatcaccgcc aacagcgcag acatcaacct ggaagatctg atcactcagg aagatgtggt
     5521 agtgacgctc tctcaccagg gctacgttaa gtatcagccg ctttctgaat acgaagcgca
     5581 gcgtcgtggc gggaaaggta aatctgccgc acgtattaaa gaagaagact ttatcgaccg
     5641 actgctggtg gcgaacactc acgaccatat tctgtgcttc tccagccgtg gtcgcgtcta
     5701 ttcgatgaaa gtttatcagt tgccggaagc cactcgtggc gcgcgcggtc gtccgatcgt
     5761 caacctgctg ccgctggagc aggacgaacg tatcactgcg atcctgccag tgaccgagtt
     5821 tgaagaaggc gtgaaagtct tcatggcgac cgctaacggt accgtgaaga aaactgtcct
     5881 caccgagttc aaccgtctgc gtaccgccgg taaagtggcg atcaaactgg ttgacggcga
     5941 tgagctgatc ggcgttgacc tgaccagcgg cgaagacgaa gtaatgctgt tctccgctga
     6001 aggtaaagtg gtgcgcttta aagagtcttc tgtccgtgcg atgggctgca acaccaccgg
     6061 tgttcgcggt attcgcttag gtgaaggcga taaagtcgtc tctctgatcg tgcctcgtgg
     6121 cgatggcgca atcctcaccg caacacaaaa cggttacggt aaacgtaccg cagtggcgga
     6181 atacccaacc aagtcgcgtg cgacgaaagg ggttatctcc atcaaggtta ccgaacgtaa
     6241 cggtttagtt gttggcgcgg tacaggtaga tgactgcgac cagatcatga tgatcaccga
     6301 tgccggtacg ctggtacgta ctcgcgtttc agaaatcagc atcgtgggcc gtaacaccca
     6361 gggcgtgatc ctcatccgta ctgcggaaga tgaaaacgta gtgggtctgc aacgtgttgc
     6421 tgaaccggtt gacgaggaag atctcgatac catcgacggc agtgccgcgg aaggggacga
     6481 tgaaatcgct ccggaagtgg acgttgacga cgagccagaa gaagaataat tttacttctt
     6541 catgccaaaa gggagctatc tcccttgttt gaattgaaaa gtccaggctg caaagtctgg
     6601 gcttttgtcg tattagggca cggtaaagtt tggctgtgcc cgtaaaaaat ggctggctat
     6661 acacaaggaa tgtggcaatg agtggtgaaa aaaaggcgaa aggctggcgg ttctatggtc
     6721 ttgtaggttt tggcgcaata gtactgcttt ccgctggcgt ctgggcgttg caatatgctg
     6781 gcagtgggcc agaaaaaacg ttgtcgccgc tggtgatgca caacaatctg caaatcgatc
     6841 tcaatgagcc ggacctcttt ctcgacagcg actctctgag ccagcttccc aaagatctcc
     6901 tcaccattcc gtttctccac gatgttctga gtgaagattt cgttttctat tatcagaatc
     6961 atgccgatcg tctgggcatt gaaggcagca ttcgtcgcat tgtctatgaa cacgatctca
     7021 cgctgaaaga taaactcttt tcgtcactct tagatca
//
LOCUS       DAJVUK010000187         7015 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.187, whole genome shotgun sequence.
ACCESSION   DAJVUK010000187 DAJVUK010000000
VERSION     DAJVUK010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7015
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.187"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..311)
                     /locus_tag="OQQ57_003769"
     CDS             complement(<1..311)
                     /locus_tag="OQQ57_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HCS1958359.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK
                     V"
     gene            complement(305..1543)
                     /gene="preT"
                     /locus_tag="OQQ57_003770"
     CDS             complement(305..1543)
                     /gene="preT"
                     /locus_tag="OQQ57_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreT"
                     /protein_id="HCS1958360.1"
                     /translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ
                     RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPG
                     GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVG
                     LSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVTMDVASTLKVLG
                     CQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT
                     MAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTMVYAV
                     KTGKEAAEAIHHYLEGACSC"
     gene            complement(1940..2179)
                     /locus_tag="OQQ57_003771"
     CDS             complement(1940..2179)
                     /locus_tag="OQQ57_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HCS1958361.1"
                     /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
     gene            complement(2182..2901)
                     /gene="sanA"
                     /locus_tag="OQQ57_003772"
     CDS             complement(2182..2901)
                     /gene="sanA"
                     /locus_tag="OQQ57_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HCS1958362.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(3051..3935)
                     /gene="cdd"
                     /locus_tag="OQQ57_003773"
     CDS             complement(3051..3935)
                     /gene="cdd"
                     /locus_tag="OQQ57_003773"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HCS1958363.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
                     SATLKALGCHSIDRVLLA"
     gene            complement(4065..4760)
                     /locus_tag="OQQ57_003774"
     CDS             complement(4065..4760)
                     /locus_tag="OQQ57_003774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HCS1958364.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMHIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(4757..5155)
                     /locus_tag="OQQ57_003775"
     CDS             complement(4757..5155)
                     /locus_tag="OQQ57_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HCS1958365.1"
                     /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            5394..6344
                     /gene="dusC"
                     /locus_tag="OQQ57_003776"
                     /pseudo
     CDS             5394..6344
                     /gene="dusC"
                     /locus_tag="OQQ57_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311053.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
     gene            complement(6732..6815)
                     /gene="yohP"
                     /locus_tag="OQQ57_003777"
     CDS             complement(6732..6815)
                     /gene="yohP"
                     /locus_tag="OQQ57_003777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohP"
                     /protein_id="HCS1958366.1"
                     /translation="MKIILWAVLIIFLIGLLVVTGVFKMIF"
BASE COUNT         1827 a         1795 c         1732 g         1661 t
ORIGIN      
        1 aatactttgt ccgggtaatc ttctttcagc cgacgcaggg cggccagatt ctcctccagc
       61 ggatgctcgg caatctgctc catatttttg aagccgataa aaccggtatc ttctttcacc
      121 agatgatcaa aacgcggcga gacttcgttg gcgataaaaa agccgatcgt tttaaacacc
      181 acaccgcccc aacctgtgtc gtaggctttg gcacacatct catagcagtt gcctaccggc
      241 gaagaagaga ggcagaacgg gttgggaaac ttcacgccgc aaaaagtaat cgaaagatct
      301 ttcgttaaca tgagcaagct ccctctaaat agtgatgaat cgcctcggcg gcttctttcc
      361 cggttttcac ggcatagacc atggttttgt caccctcaac aatatcgcca gcagcaaaga
      421 cttgcgggtc gcgggtctgg taattttgtg ttttgatggt gttacgctgc ggctctaact
      481 ccgcaaaggc atctagtctg gcatgctgac cgacggcgag aataatttta tctgccgcca
      541 tcgtcagttc gcccgataac cgtacatgct taaacgtgac tttattgcct tccacggcta
      601 ctggcgtgaa tccatcgatg atcgaaacgc ccagctcccg ggcgctggta aactcttttt
      661 cgcttgccgg aaactcatct aactcttcac gcgctacgca agttaccgcc tgacagccga
      721 gaactttcag cgtgctggct acgtccatcg tgacatcacc gccgccgata attaatgcgc
      781 tttgtggaat gctgatatcg ccttgcgcct gtcgtgcacg ttgcaagaag tcgacggcaa
      841 tctcaacgtc actatgctca aacagcggta gcccggaacc gcttgataac cccacggtga
      901 ccagtaccgc gcggttttct gctttcagct gctcaagggt gagtgtgtta ccgacttcgt
      961 tgttgcactt aatggtcacg cccatttttt caatacgggc gatctctgca tccagtactg
     1021 attgcggtaa ccggaattgc ggaatgccgt tacgcaacca gccaccgggt tgtgcttctt
     1081 tctcatagat cgtgacgtca taaccctggt ttgtcagtgt cacactggcc tgcaatccgg
     1141 caggacctgc gccaataatc gcgactttgc cgagcgtttt agtaccgggc tgataaattt
     1201 ccatcccggt ttgttgttca aaatcagtaa caaaacgctg taagcggccg atatcaatgg
     1261 gagcatcaac accggcacgg gtacaaccgc tttggcataa tttctccgtc gggcacactc
     1321 tggcacaaac ggcaccgagg gcattatttt cgcgaattgt ctcggcagcg cctttaaaat
     1381 tacgaaagta gattgagcga ataaatttcc ccggatcggt ctgtgccggg caagcctgac
     1441 tacagggagc gtcgtgacat aataaacagc gagaggcttc tttaatcgcc agtaacggcg
     1501 taaaagccgg agtgagttca tccagataat tttgttgcgg catgtgatct tccttaatgc
     1561 tatgagtaat taaggcgaac gctaaatata ctcgtcatac ttcaagttgc atgtgctgcg
     1621 tctgcgggtt attcggccca tccatgggcc tcacccctta tggggccgct gcaggcagcg
     1681 ttcaaatccg ctccatgcgg atttgtcgct caccccagtc acttacttat gtaagctcct
     1741 ggggactcac tcacttgtcg ccttcctgca actcgaatta tttagagtat aaatattgcg
     1801 tgctgatatt aaggctatgc gcgtggggaa atttatactg tgaaaggatt cacaaatagc
     1861 tgcggttcag aatgttatat ccgcagctta ttgagtgaag taataattat tctcaataat
     1921 taacagaaaa gagaaaatat taacgataga aaataagata aacaatcatg ccgatagata
     1981 aaattccgaa gccgatatat gccaccatat aagcgaaaaa gagtccggga ttttttgctc
     2041 gccagacata caccggttcc ggtgcatttt taacccgttt atcaatcgcg cctgcgcgcc
     2101 agcctttcca tgcttcgcgg aaacaaaata tcggaataag gaaaaaaacg gcaacgacaa
     2161 aaaactgctg tacatccata actactttcc ttgtttcttt tgtaattcaa gtaactgttc
     2221 gggtgtgacg gcgggatacc cctgcgcatc ttccggcacc tggtgcatag ccggaatagg
     2281 gaccagcggc cctaaaaaac gcggttcacg tttaaaaata taaaggtcag ccagcgcacc
     2341 gaaacgggcg gcaaattcgc gaatacgtac tgacagcata tctttcggtg acggtacggc
     2401 ataacactga gcctgaatcc ccatatgcag cgcaataaat aatgcccgct cacagtggaa
     2461 acgttgggtg ataataatga aatcattagt atcgaaaact ttgcgtgtac gcacgatgga
     2521 atccagcgta cgaaagcctg cgtaatcgag aacaatatct gatgggtcga caccagcagc
     2581 gattaaatct ttgcgcatgg tcatcggctc attataactt tgcaatgcgt tatcgccgct
     2641 cagtaataga taatttacct taccgctgtt ataggcatta atcgctcctt gaatgcggta
     2701 gcgataatac tgattaatta cgccagtacg ataatatttt gctgttccga gcaccacacc
     2761 gacctggcgg taggggagat cctgcaattc gtcgtagata taaggcgcgg ttttccagct
     2821 catccagcga tcgaggccga gcacagtcaa caacagcaag ccgatcagga ctaacaggct
     2881 gaggaacacg cgctttaaca tgcaggagac tcgatctaag gaaaatttcc atcaggctac
     2941 tttacccgct ggttttgcgc aagaaacggc aaactgtttg ccgggaattt cgacaccagg
     3001 agagggctgg caagccggac aaggcgttca cgccgcatcc ggcaccaggc ttaagcgaga
     3061 agcactcggt cgatactgtg acagccgaga gctttcagcg ttgcggaggt ggcatcccac
     3121 tgaatcaacg gcgcatcggc tttttctgcc agaaccgcgc gctggatatc cgggtaatca
     3181 taacccttga gattcaacag aattaacgct ccctgcaacg gtggcagagt cgggttgaat
     3241 gcggcgtttt cagcgtagct gccactgaaa atacgaccgt ctttacattc cagcgcgaca
     3301 ccgcttggcg acttactgta aggcatgtgc gaacggtttg ccgctgcaat cgccgcctga
     3361 gaaagcgcat caccagtcag cgcatagccg tgatcctgct cgtccatcag cagcgtttta
     3421 atctccagat ctttcggccc aaaggcatcc ggcagatagt cacgcagcgc gtgtgcctcg
     3481 cggcccggca gatgaatacg cagatccaga ccgctgttca gttcattcat aaactgacgg
     3541 cagtgaccac aaggcgtgta gttaacggtg atggctgcaa gcgctttttc accactcaac
     3601 caggcgtggc tgatcgcgct ttgttcggca tgaacggttt gctgcattgt cgcaccaata
     3661 aattccatat tggcaccgaa ataccaggtt ccgctcacac cgcgcgcaat tgcgccaaca
     3721 ttaaaattcg acaatggcgt acgcgcacag gccgctgcca gcggaagtag tgcgaatgcc
     3781 agcgcgtctt cgtccagccc cgttgcgctc ttcagcgatg agacttgctc cccggtcaac
     3841 aaagcgggga agtacttgtc tgccagaata ggttccagtg cagattgcaa gttatccgca
     3901 agttgggcaa aagcggtttg aaaacgtgga tgcatggcgt tgcctcataa tcatgtaatg
     3961 ggataacagt ttacgaaccc gttatggctt tatatgtgat ctgaatctca ttaattatgc
     4021 aacgcgtgaa acttacatca aaaatgcgcg acgcatcgca aattttagcc cattactgcc
     4081 agaataatcg ggaaaaggaa cggtgcgatc agcgaagtaa ttatcccgca taacaccagc
     4141 gctagcgaac taaatgcacc ttcctgataa tccagctcgg cgcagcgcgc cgtaccgagg
     4201 gcgtgcgagg cagtccccat tgccagaccg cgcgcagctt tggtacgaat atgcatcgca
     4261 ttaagcaatg tatggccaaa taccgcgccg aggatgccga cgaaaatcac gcaaactgcg
     4321 ctgattgccg gaataccgcc aatactgccg ccaaccgcca ttgcaatagg cgtggtgact
     4381 gatttcggca ggattgacgc ggcgatttcc ggtgaagcgc ccatcaacaa tgccacggaa
     4441 gtccccgtca ccatcgcaac cacgctgccg ataaaacaga tggtgatgat cgatttccag
     4501 cgcgcgcgga tctggtgtag ctgctcatat aaaggatagg ccagcgcgac gaccgccggt
     4561 tgcagcagat cgtttagcac ttcgctacct ttaaagtagc tgtcgtaaga gatgccggtc
     4621 agcattaaaa aagggatgat caccaccatt gctaccagca acgggttaag caagggaaac
     4681 ttataccgtg ccgccagttt gcgggcggca aaaaagacga tcaatgtcag tggtaatgac
     4741 caccagatat tagccatcat tcttctgatc ctttctgacc tacgacttta cgttcaccgt
     4801 gcaccagttg cgaactccag ctcaccacca gaaaaaccac cagtgtactg acagcacagg
     4861 aaaccactac cgggccaaac tgtgcgcgga gcaaatcaaa atattgcatg acgcctacgc
     4921 caatcggcac aaacaatagc gccatatagc gaatcagtac gtagcacccc ggattgaccc
     4981 attttgccgg aagaatttgc aaggccagca ggacaaacag gatcagcatc ccgatgatgc
     5041 tgcccggaat ggttaccggt agcagggaag caatgaaaat gcctgcatac aggcaggcat
     5101 aaatcaggac gaaagcgcgt aaatattgcc agataatgtt cagtgtctta ctcataatca
     5161 acaccccaga tgagatgaat tcatcataca attaattcgt aaaacgtgct accgatcaca
     5221 ttaagaaatc agcgcttatt ttttcgctcc ccggcattac gcaatgcgca acgaactcag
     5281 gcatacatca agcatagaga gggattacag tttgcagcaa tccctctttg cagaccttta
     5341 atccgttgac cataggcgct aacatagcgc ctcatttttt tgcgggtgaa gatatgcgtg
     5401 tgttactggc tccgatggag ggtgtgcttg actctctggt gcgtgaattg ctgaccgaag
     5461 ttaacgacta cgatctgtgc atcaccgagt ttgtccgcgt ggtggatcaa ctgctgccgg
     5521 taaaagtttt tcatcgcatt tgccctgagc tacaaaacgc cagccggaca ccatccggta
     5581 cgctggtgcg cgtgcagttg ttgggtcagt tcccacaatg gctggcagag aatgccgccc
     5641 gtgcggtgga attaggttcc tggggcgtgg atctcaattg cggctgcccg tcgaaaacgg
     5701 tcaacggtag cggtggtggg gcgacgttac tcaaagatcc tgaactcatc tactagggtg
     5761 caaaagcgat gcgtgaagct gtaccggcgc atttgcccgt cagcgtgaaa gtgcgtctgg
     5821 gctgggacag cggtgagaag aaatttgaaa tcgccgatgc ggttcaacag gctggtgcta
     5881 cggagctggt ggtgcatgga cggacaaaag agcagggtta ccgcgcggag catattgact
     5941 ggcaggcgat tggcgagatt cgccagcggc tgaatattcc ggtgattgcc aacggtgaaa
     6001 tctgggactg gcagagtgcg caacaatgta tggcgatcag cggctgcgac gcagtgatga
     6061 ttggtcgcgg ggcgctcaat attcccaacc tgagccgggt ggtaaaatat aacgaaccgc
     6121 gaatgccgtg gccggaggtg gttgctttgc tgcaaaaata tacccgtctg gaaaagcagg
     6181 gcgataccgg gttatatcac gttgcgcgga ttaaacagtg gttgagttat ttgcgtaaag
     6241 aatacgatga agcaacggaa ttatttcagc atgttcgggt gttgaataat tcccctgata
     6301 ttgcaagggc tattcaggca attgatatcg ataagctgcg ataatagtgg aatcgcagtt
     6361 tatcagagac aatgaatcgc ttattcagct tcatcatctt gttgcgctcc tttcatgagc
     6421 taagccacat attgccactg gcgcaaggag cgcgcagggg gaggacaatc gcctcctccc
     6481 cctgcccccc cgggctctgg cgaacaaaat cgccgctgcg cggtaccttc agcttatccc
     6541 cttcggctac cgggtcgggc gcgaggtaac gtccttgtaa gacgcgccct cagcccacat
     6601 ccatgtgggc tgccccggcc ttcggggaac gcttcagcga ttttgacgcc accaacaccg
     6661 gagctgtttg caaatcaagt acacaaaata tctagttcct gacctgacaa cttatatgcc
     6721 atatctgatt tttaaaatat catcttaaat acgccagtca ccaccagtag cccaatcagg
     6781 aaaataatca atacagccca gagtataatt ttcattggcg ttcctttatt tgtgagtgtt
     6841 gaataagtat aggaaaaaac gaagcccttt gccgttatcc ataaacgatt aagataaatc
     6901 ggaagatatc attcacttag tctatatttt tctgggtatg tcgttttatt gctactgatg
     6961 tattgccacg cgaaactaaa aaatatatcg caacacacgg taatctccgc gcacc
//
LOCUS       DAJVUK010000188         7005 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.188, whole genome shotgun sequence.
ACCESSION   DAJVUK010000188 DAJVUK010000000
VERSION     DAJVUK010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7005
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.188"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..238
                     /locus_tag="OQQ57_003778"
     CDS             <1..238
                     /locus_tag="OQQ57_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958367.1"
                     /translation="LFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLN
                     KMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR"
     gene            complement(207..1931)
                     /gene="aceK"
                     /locus_tag="OQQ57_003779"
     CDS             complement(207..1931)
                     /gene="aceK"
                     /locus_tag="OQQ57_003779"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HCS1958368.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     LAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDL
                     PLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAALVEWLREILPGKTT
                     AELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVI
                     KDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQE
                     AAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIF
                     PGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSVSPGD
                     VFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRRQRFS
                     VRYGEMLF"
     gene            complement(2212..3509)
                     /gene="aceA"
                     /locus_tag="OQQ57_003780"
                     /pseudo
     CDS             complement(2212..3509)
                     /gene="aceA"
                     /locus_tag="OQQ57_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
     gene            complement(3539..5140)
                     /gene="aceB"
                     /locus_tag="OQQ57_003781"
     CDS             complement(3539..5140)
                     /gene="aceB"
                     /locus_tag="OQQ57_003781"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HCS1958369.1"
                     /translation="MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASICDADWKIRGIPADLEDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     MREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKMLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFGDAA
                     RLMEQITTSDELIDFLTLPGYCLLA"
     gene            complement(5409..6338)
                     /gene="metA"
                     /locus_tag="OQQ57_003782"
     CDS             complement(5409..6338)
                     /gene="metA"
                     /locus_tag="OQQ57_003782"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HCS1958370.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLDPEVPYNYFPHNDPQNTPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            6495..6942
                     /locus_tag="OQQ57_003783"
                     /pseudo
     CDS             6495..6942
                     /locus_tag="OQQ57_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
BASE COUNT         1681 a         1799 c         1817 g         1708 t
ORIGIN      
        1 cctgtttgga tttaccgctg aagatattat ggatttttgg caacacaaag cgccacaaaa
       61 atactctgcc tttgagttgg cttttgaatt tggtcaccgg gttattgctg aattaatcct
      121 taatacatta aataagatgg ctgaaagctt tggctttacg gataaccctc gatacattgc
      181 ggagaaaaat tatatggaag ctttactcaa aaaagcatct ccccataccg tacgctaaat
      241 ctttgcctgc gccgatacgc ataaacatct tccacatgcc cttcacgtat gcggttttgt
      301 agtgcgcgcc agtaatcagc gcggaacagg tcggcgtgca tctcttcaaa cagcggacca
      361 atacgcgggt cggcgcatag ccagtggcga aactcttccg ggaaaacatc gcccggcgag
      421 acgctgtacc acggttcgct ggcaagttcg tcttccggat agcgcggcgg cgggatgtcg
      481 cggaaattca cttccgtcat gtagcaaatt tcatcgtaat cataaaaaac cacacgcccg
      541 tgacgggtga caccgaagtt tttaaacagc atgtcgccag gaaaaatgtt agcagcggca
      601 agctggcgaa tagcgttacc gtattcttca atggcgtcgc gcaactgctg accttccact
      661 tgttccagcc agatattgag cggcaccatc cgccgctcga tatagagatg gcgaattaca
      721 atctgctcac caagatcggt gattttttcc gctgcttcct ggagcagtaa ttccattaat
      781 gccggggaaa tatgccgctt ctccagcaca aagttttcaa actcctgggt gtccgccatt
      841 cggcccacac ggtcgtgctc tttcaccagt tgatagcagg cacgaacgtg agcggcagac
      901 atctctttct gcggcgcgaa cttgtctttg atgactttga atacccgatc aaagcccggc
      961 agcgtaaaca ccaacatcac cattccacga atacccggcg cttcaatgaa ctgctcatta
     1021 cagccctgta gataaacgag atattcgcgg tagctttcgg ttttggcgtg cttctggcag
     1081 ccgatagcca tatacaattc agcagtggtt ttacctggca gaatttcccg tagccactcg
     1141 accagcgctg cataaaccat aaaataagaa cgcgcaaagc caaaaacaat gctcgcttcg
     1201 gcggtcgtcg tcaggcaggt atcaataaat aactcgccgt cgtccgtctg gtggatcggc
     1261 agtaagaagg gcaacgtgcc ggaaggcgtg atcagtttgc ccaccagcca ggcggcttta
     1321 ttgcggtaaa acagttcgtt cgccacctgt aaatgacttt ccgcgaggtt gtctgtcccc
     1381 agcgtttccg tcagatggcg aatgatgtaa tgaatgtcac ggcttttatt ctgccagcgc
     1441 aggcgcagcg gcaggtcgct gataacgcgc atcagtagag attcccagcc gtgatcgggg
     1501 tgaaagtctt tcgccagcgg gcggggaatg gtacgaaagc ggcgctctgg ctgagagcta
     1561 aagataaaaa gccgctcggg agtaagcgag cggtggtcaa ataaccgaca gtacacggag
     1621 ttaaaaaagc tctccgcaat ctcgaagcgc gggtaatccg gcaacagccg cgtgtaatgc
     1681 tctttaacgc gcagtaaaaa tgccgcgtcc gtactttggc cgttagtaat gcagcgcagt
     1741 tgctccacga ccagaccaac gtgatgatcg taaagatgga tacggttttt catcgccagc
     1801 tggacagcat gccagtcggc ctgttcgaaa cgctgctgcg ccccggaagt cacttcgagg
     1861 aatcgaccat actgagcgtc gaagccttgc aaaatggttt gagcaatcag taattccagg
     1921 ccacgcggca tttagcgccc tcatcaggag cagagaattg ccggatgcgg cgtaaacgcc
     1981 ttatccagcc tacgttcggc aacggttgta ggcatgataa gacgcgcaag cgtcgcatca
     2041 ggcatcgtgc accgattgcc ggatgcggcg taaatgcctt atccggccta cgttcggcaa
     2101 cggctgtagg catgataaga cgcgcaagcg tcgcatcagg catcgtgcac cgattgccgg
     2161 atgcggcgtg aacgccttat ccggcctaca gtcagcaacg gttgttgttg cttagaactg
     2221 cgattcttca gtggagccgg tcagcgcggt gactgaagac gtgccgccct gaataatagt
     2281 cgtcacttta tcgaagtaac ctgtacccac ttcctgctgg tgagatacga aggtatagcc
     2341 atctttcgcg gcggcaaatt ccggctgctg cactttctca acgtagtgct tcataccctc
     2401 gccctggtca taggcgtttg ccaggtcaaa catgttgaac cacatgctgt ggatacctgc
     2461 cagggtgatg aactggaact tgtagcccat atccgacagc tgctgctgga agctggcaat
     2521 agttttgtcg tcgaggtttt tctgccagtt gaacgacggc gagcagttat aagccagcag
     2581 tttgcccgga tatttcgcgt ggatagcttg tgcaaagcga cgcgccagtt ccagatccgg
     2641 cgtggaggtt tcacaccaga ccaggtcagc atatggcgca tacgccaggc cacggctgat
     2701 cgcttgctca atgcccgcat gagtacggaa gaagccttca ctggtacgct cgccggtaat
     2761 aaattcgctg tcatacgggt cgcaatcgga ggtgatcaga tccgcggcat cggtacgagc
     2821 aaccagtagg gttggaacgc ccgtcacgtc agctgccaga cgcgccgcga ccagtttctg
     2881 aatagcttct tgagttggca ctaaaacttt gccgcccatg tgaccgcatt tcttcactga
     2941 cgccagctga tcttcgaagt gaactgccgc tgcaccggct tcaatcatcg ctttcatcag
     3001 ttcaaaggca ttcaggacac cgccaaaacc ggcttccgca tcggcaacga tcggcaggaa
     3061 gtaatcgaca tagcgcggat cgcccggctc aatgcccgcg gaccattgga tctgatccgc
     3121 acggcggaaa gtattgttga tccgctccac cacagctggc accgagtttg ccggatagag
     3181 cgactgatcc ggatacatgc tggccgccag gttagcgtcc gccgctacct gccatcccga
     3241 cagatagact gcttcaatac ccgctttcgc ctgttgcagc gcctgaccgc cagtcagtgc
     3301 accgaggctg ttgatgtagc ttttttcgac tcgccatgca gcagacgcca cattctcgcc
     3361 gcgcccagtt gcgccagggt gcattcagga ttgactgaat cgcgtaattt caccacatct
     3421 tccgcgctgt atgggcgagt aatgccttcc caacgcggtt gagtccactc tttctgtaat
     3481 tcttcaattt gttgtgtacg ggttttcatg tgcagatgct ccatagttat gtggtggttt
     3541 acgctaacag gcagtagcct ggcagggtca ggaaatcaat taactcatcg gaagtggtga
     3601 tctgttccat caagcgtgcg gcatcgccaa aacgcccctg ggagaaacgt tcttcgccca
     3661 gttcgctggc aatgactttc atctcttcgc ccagcatctg gcggaacaag gctttagtta
     3721 ccggtttgcc attgctcaac attttttgat gatggatcca ctgccagatt gaggtacggg
     3781 aaatttcagc cgtcgccgca tcttccatca ggccataaat cggcacacag ccgttgccag
     3841 agatccacgc ttcgatgtac tgcacggcta cgcgaatatt tgcgcgcata ccttcttcgg
     3901 tgcgttcacc gtcacaaggt gccagtagct gatcggcagt aatcggcgcg tcttgttcgc
     3961 gcatcacttc aagctgattt ttacgggagc cgagaatgtc gttgaatacc gccattgccg
     4021 tatccgcaag gcctgggtga gcgatccatg tgccatcgtg accgttattg gcttccagcg
     4081 atttatccgc ttttactttg ttgagcacct ggttattgtg ctcttcatct ttgctcggaa
     4141 taaacgccgc catgccgccc atcgcaaaag caccgcgttt atggcaggtt ttaatcaaca
     4201 ggcgtgagta agcattcagg aatggtttat ccatcgtcac tgcctgtctg tctggcagga
     4261 cgcgatcggg atagtttttc aacgttttga tatagctgaa gatgtaatcc caacgaccgc
     4321 agttcagacc aacaatatgg tcacgcagcg cgtgaaggat ttcatccatc tggaacacgg
     4381 cgggcagcgt ttcaatcagc aacgtcgcct tgatggtgcc gcgcggcaga ttaaagcgat
     4441 cttctgcata gctgaagact tcgctccacc aggccgcttc ctgccaggac tgggttttcg
     4501 gcagatagaa atagggacca ctgccctttg ccaacagagc ctgatagttg tggaagaaat
     4561 agagcgcaaa atcaaacagg ctgccgggga ttgcctcacc acgccaggtg acatgttttt
     4621 ccggcaagtg cagaccgcgt acccgacaaa tcaaaaccgc tggattgggc ttgagctggt
     4681 aaattttgcc tgcttcattg gtatagctga tggtaccgtt aactgcatca cgcaggttaa
     4741 tttgcccgtc gatcactttg ttccagtccg gggccagtga atcttcgaaa tcggccataa
     4801 agactttcac attggcgttg agcgcgttga tcaccatctt gcgctctacc gggccagtta
     4861 tctctacgcg gcggtcttct aagtccgcag gaatcccgcg aattttccaa tcagcatcgc
     4921 aaatggaagc tgtttccgaa ataaaatcag gcaacgttcc gttatcaata tcttgctgct
     4981 gctgaatgcg cgctgccaga agtttatttc gttgtggcgt aaaatgcgtc accagctcag
     5041 tcagaaattc taccgcttcg gcagtaagaa tttgcttctc ctgctcgcca tacggccttg
     5101 tgaaagccag ttcatcggtt gttgttgcct gttcagtcat cgtgcagctc ctcgtcatgg
     5161 atccgaaaac ttccccactg tgaacgaagg atcgttgtgc gcttttcgtt cagcacaact
     5221 aagactactc atttaaaatg caaaatcaaa aacaatttcc attttaattg aaaatgcttg
     5281 ataacttatt gataacaatg tgaataaaat ttattcacct cctgaggtgc gtttcggaaa
     5341 taaaaaaggc acccgaaggt gcctgaggta aggtgctgaa tcgcttaacg atcgactatc
     5401 acagaagatt aatccagcgt tggattcatg tgccgtagat cgtatggcgt gatctgatag
     5461 acgtaatagt tgagccagtt ggtaaacagc aaattaccgt gactacgcca gctcgctcgc
     5521 ggtgtatttt gcggatcatt gtgcgggaaa tagttatacg gtacttccgg gtctagtccg
     5581 gcttccacat cgcggaaata ttcctgcgcc agcgtttgcg catcatattc gggatggccc
     5641 gtcacaaagg caatgcgctt atctttgctg gcaaacagat atgcatcccc ttcttccgtc
     5701 tctgccagaa tttccagatc ggtgtaatca cgaatcaacg ctgccggaaa gtcagcatag
     5761 cgcgaatgtg gtgccaggaa tgaatcatca aagccacgcg tcagaagcgc atgaggatgg
     5821 agaatatgat gctcgtaaac gccagagagt ttgtcggtgc gagtttgctt aggaatgccg
     5881 tagaggatat tgagcgcggc ctgtaccgcc cagcagacaa acagcgtcga ggtgacgtga
     5941 tctttcgacc actccagcac ctgtttgatc tgcggccagt aagcgacatc attaaactcc
     6001 accaggccca gcggcgcacc ggttacaatc agaccgtcaa agttctgttc ctgaatatct
     6061 tcaaagttac agtagaagtt gttcagatgc tctgcgggcg tgttgcgcga ttcacgggaa
     6121 tcgatgcgca acagctgaat atcgacctgc aaaggtgagt ttgaaagcag gcgcagaaac
     6181 tgattttcag tttcaatctt cttcggcatc aggttaagga tcagaacctt aagtggacga
     6241 atttcctgac cagacgcacg agaagttgtc atcacaaaga cgttttcttc acgcaagaaa
     6301 ttgacggcgg gtagctcgtc cggcacacga atcggcataa cctgattacc tcactacata
     6361 cacttatacg tttagacatc cagatagctg aagataacca gaaaatttgc caatgtcgag
     6421 cctgcatgtt gaaggtgaga aagtttcaag gaaaagacta cgttagaata taagaatgac
     6481 taaaaggaga gaaaatggtt attagtattc gccgctcacg gcatgaggaa ggggaggaac
     6541 tcgttgcgat ttggtgtcga tctgtcgatg ccacacacga ttttttatca gcagagtatc
     6601 gggccgagct ggaggtgcta gctagttcgt tccttcctgc cggaagcgcc gttgtggatc
     6661 gcggttaatg aacgggatca gccggttggg tttatgttgt taagtgggca gcatatggat
     6721 gcgctgttta tcgatcctga tgtgtgcggc tgcggcgtgg atcggatgct ggtggagcat
     6781 gcgctctcga tggcaccgga actgacaacc aacgttaatg agcaaaatga gcaggcggtt
     6841 gggttctata agaaggtggg ttttaaggtt acgggacgct ctgaggtgga cgatttgggg
     6901 aaaccgtatc cgttgctgaa tctggcgtat gtgggggaat aagccgcccc tgccgtgcct
     6961 gcccaggctg gagaagacgc gccagcgtcg cacccggcat ttttt
//
LOCUS       DAJVUK010000189         6997 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.189, whole genome shotgun sequence.
ACCESSION   DAJVUK010000189 DAJVUK010000000
VERSION     DAJVUK010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6997
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.189"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..374
                     /locus_tag="OQQ57_003784"
     CDS             <1..374
                     /locus_tag="OQQ57_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958371.1"
                     /translation="RPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQY
                     RKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
                     KGKLTPALLQILIREIKGSSH"
     gene            374..721
                     /gene="tnpB"
                     /locus_tag="OQQ57_003785"
     CDS             374..721
                     /gene="tnpB"
                     /locus_tag="OQQ57_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1958372.1"
                     /translation="MISFPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLF
                     IFRGRRGDQIKVLWADSDGLCLFTRRLERGRFVWPVTRDGKVHLTPAQLSMLLEGIDW
                     KHPKRTERAGIRI"
     gene            741..1895
                     /locus_tag="OQQ57_003786"
                     /pseudo
     CDS             741..1895
                     /locus_tag="OQQ57_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1899..2058
                     /locus_tag="OQQ57_003787"
                     /pseudo
     CDS             1899..2058
                     /locus_tag="OQQ57_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2647..2945
                     /locus_tag="OQQ57_003788"
                     /pseudo
     CDS             2647..2945
                     /locus_tag="OQQ57_003788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343747.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            3027..3164
                     /locus_tag="OQQ57_003789"
                     /pseudo
     CDS             3027..3164
                     /locus_tag="OQQ57_003789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            3534..4211
                     /gene="ospD1"
                     /locus_tag="OQQ57_003790"
     CDS             3534..4211
                     /gene="ospD1"
                     /locus_tag="OQQ57_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector/anti-activator
                     OspD1"
                     /protein_id="HCS1958373.1"
                     /translation="MSINNYGLHPANNKNMHLIIGSNTANENKGMKRNIINVTNTAIS
                     HAINEEKSGGGYSGVSFRKLAKIQSISIPTKNNKEYNRHNLFSLIWHGNADAARKYGE
                     SLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAAIQAYGDFIKTFDLSPKETIK
                     LLDVRDNEGLPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNEQDMFNIIS
                     DKIQELF"
     gene            4535..4645
                     /locus_tag="OQQ57_003791"
                     /pseudo
     CDS             4535..4645
                     /locus_tag="OQQ57_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            4723..5037
                     /locus_tag="OQQ57_003792"
     CDS             4723..5037
                     /locus_tag="OQQ57_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958374.1"
                     /translation="MLQRQRGKVGFAQLPVDFVAIEPDSAQGVGKRANLTNRCFIIRI
                     NDSFKKRQGFIEFISNSGSGHTVTVYTKRRFQRGVFMNSLNTNVVKPVMYRLRSSADA
                     RP"
     gene            5319..5885
                     /gene="ipgB2"
                     /locus_tag="OQQ57_003793"
     CDS             5319..5885
                     /gene="ipgB2"
                     /locus_tag="OQQ57_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion effector IpgB2"
                     /protein_id="HCS1958375.1"
                     /translation="MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKIN
                     TSILSSVSEQIGENITDWKNDEKKVYVSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQV
                     EKDYHISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVANLISDQF
                     FEKNVQYIDLKKLRGNMSDYITNLESPF"
     gene            complement(6147..6269)
                     /locus_tag="OQQ57_003794"
                     /pseudo
     CDS             complement(6147..6269)
                     /locus_tag="OQQ57_003794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            6412..6966
                     /locus_tag="OQQ57_003795"
                     /pseudo
     CDS             6412..6966
                     /locus_tag="OQQ57_003795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS3H family transposase"
BASE COUNT         2050 a         1518 c         1644 g         1785 t
ORIGIN      
        1 ggcggcctaa ttttccttat gaatttaaaa tcgccttagt ggagcagtca ctgcagcccg
       61 gagcctgtgt ggcgcagatc gcccgtgaaa acggaatcaa cgataacctg ctcttcaact
      121 ggcgccatca ataccggaaa ggtggcctgc tgccttccgg aaaaaatatg cctgcactgc
      181 ttcccgtgac gttaacgccg gagccggata ataaaatccc ggctccggca caggaaccag
      241 agcagataaa tacaccgtcc gacagtctgt gctgtgagct ggttctgccg gccggaactc
      301 tcaggcttaa aggtaaactg acgccggcgt tattacagat acttatccgc gaaataaaag
      361 ggagcagcca ctgatgatat ctttccctgc aggttcgcgt atctggctgg ttgcaggtat
      421 caccgatatg cgaaatggct ttaacggcct ggcctcaaaa gttcagaacg tcctgaagga
      481 tgacccgttc tccgggcatc tgttcatctt ccgcggacgc cggggtgacc agataaaagt
      541 gttgtgggct gacagtgacg gactgtgcct ctttaccaga cgcctggagc ggggccgctt
      601 cgtctggccg gtcacccgtg acggcaaggt gcaccttact ccggcccagt tatccatgct
      661 tcttgagggc atcgactgga aacacccgaa acgaacggaa cgcgctggca tccgcatata
      721 acccgttgta aagtgaggat atggacacct cacttgctca tgagaatgcc cgcctgcggg
      781 cactgttgca gacgcaacag gacaccatcc gccagatggc gaaatacaac cgcctgctct
      841 cacagcgggt ggcggcttat gcttccgaaa tcaaccggct gaaggcgctg gttgcgaaac
      901 tgcagcgcat gcagttcggt taaagctcag aaaaacttcg cgcaaaaacc gaacggcaga
      961 tactggaagc acaggagcga atcagcgcac ttcaggaaga aatggcggaa acgctgggtg
     1021 agcaatatga cccggtactg ccatctcccc tgcgccagtc ttcagcccgt aaaccgttac
     1081 ctgcctcact tccccgtgaa acccgggtca tccgtccgga agaggaatgc tgcccggcct
     1141 gtggtggcga actcagttct ctgggatgtg atgtgtcaga gcagctggag cttatcagca
     1201 gcgcctttaa ggttatcgaa acacaacgtc cgaaactggc ctgttgccgg tgtgaccata
     1261 tcgtgcaggc accggtgcct tcaaaaccca ttgcacgcag ttatgccgga gcggggcttc
     1321 tggcccatgt tgtcgctgga aaatatgcag gctatctgcc gttataccgc cagtcagaaa
     1381 tataacgtcg tcagggcgtg gagctgagcc gtgccacact gggtcgctgg accggtgccg
     1441 ttgctgaact gctggagccg ctgtatgacg tcctgcgcca gtatgtgctg atgcccggta
     1501 aagttcatgc ggatgatatc cccgttccgg tccaggagcc gggcagtggt aaaacaagaa
     1561 ctgcccggct gtgggtctat gtccgtgatg accgtaacgc cggttcggaa atgcctccgg
     1621 cggtctggtt cgcgtactca ccggaccgga aaggtatcca tccacagaat catctggccg
     1681 gttacagcgg agtgcttcag gccgatgctt acggtggtta ccgggcgttg tacgaatccg
     1741 gcagaataac ggaagccctg ctgcgtatcg gtgaactgta tgccatcgag gcagaagtcc
     1801 ggggatgttc agcagaacag cgtctggcgg caagaaaagc cagagccgcg ccactgatgc
     1861 agtcactgta tgactggata cagcaacaga tgaaaattca ttcgctgaaa atggaatgtc
     1921 tccacggaga acactattat ccatcgggaa atagtgcggg caacagtgtt tagttatatc
     1981 gagtgcgatt acaatcgctg gcgacggcac cgttggtgtg gtggtctcag tccggaacaa
     2041 tttgaaaacc agagcctcac ttacgactgt gtccatatta tgtgggtagg atcaataaag
     2101 acgttttata tgtgtctgct tgcagccaga aaatttatac cctgcaggta tcataaacat
     2161 gcttgacaac ttaattaggg ccccctcttc cttttatggt gtaattgttt gattgaatac
     2221 ttccggggat ttcagtatga aatgaagtat atttaatata ctttacaaaa agtttgtatg
     2281 agtggaataa gaacaatagt ttatccaaac tgccaagccc ctttattata agtaagatct
     2341 ggcactggaa tattctcaaa aggactaaca tcatcaccac gaccttcaac caaccataaa
     2401 aaacaatact attttaggtg atgtattaaa ttagtagaat atttattctt ctataaaagc
     2461 actaccccaa gaggttaatc aggtcatcca tgattattta tcatatacta actatgtggg
     2521 atttcaacgt gaaaacttat tttcactata atcttcagga ttcgaagatc ataggagcct
     2581 gtacataagt ttgtataatt ctctgatgtt gaactattta atttgatatc aaatgaaggt
     2641 gaatttatga atgaaaaaca gttgacatct aataagttgc gggctttagc taatgaacta
     2701 gccaaaagtc tcaaaaatcc tgaagatctc agtcagtttg attggatgct gaaaatgaaa
     2761 ccgtactcaa tgctaatatg actcatcatc ttgggtgcga gaaaaatcag cttagatctg
     2821 gcagcaattc ccgcaatggt tgcttaacga agattatcac tactggagat gaacctctgg
     2881 aaatccgtac tctgcgtgat cgtaatggca ctttcgaacc gcaacagctg aagaaaaacc
     2941 agccctagat tactaaatct gtcgggcgat ggattaactg gttcaggctg tctggtgctg
     3001 aaggcctgaa gtcactgctg tcagtgatgt ggccggctct tcatgagaca ataacccgta
     3061 atcatcagtg ccgttcaata tggccactgt tgaaaaaagt tcgtcacttt atggagacgg
     3121 ttagcccact tcccggagaa aaacatagtc tggccaaagt gtagcggtat taggctcaca
     3181 tatttagatg tagataagcc ggagcaggca gttaaatcta ggcagcatca cagaaatgga
     3241 caacgcccct taaggactgg cgtatggcaa tgagctgctt tattatcaag tttggtgatc
     3301 gccttgacgg tcacttctga gtgaaggcgc ttgcacagaa tggtaaacgg actcgattat
     3361 tgaatcttag ggataagata tatctacgat atgtcaatat acgaaatcga aagaatttat
     3421 tggtgaatat agccattcaa tgtggcaatg gtttttttag attagcaata gactaatatc
     3481 tattacatta caaaaatagg ttattgtttt tttagcaaaa aggatgaaca aaaatgtcaa
     3541 taaataacta tggattacat ccagcaaaca acaaaaatat gcacctaata ataggcagca
     3601 atactgctaa tgaaaataaa ggaatgaaac gtaatatcat taacgtgaca aataccgcta
     3661 tatcccacgc catcaatgaa gaaaaatcag gggggggata tagtggtgtt tctttcagaa
     3721 aattggccaa aatacagagc atatccattc cgacaaagaa taataaggag tataaccgcc
     3781 ataatttgtt ttcattgatt tggcatggaa atgctgatgc agcgcgtaaa tacggtgaat
     3841 cgctgttggc agccgaaata cccaaagagg aaaaactaga agttcttgca gcacgaaata
     3901 atgctgggga atctgctttg ttcatagctc ttcaagaagg tcattccgct gcgattcaag
     3961 cttatggaga ttttattaaa acttttgatt tatcaccaaa agaaacgatt aaactattgg
     4021 atgtaagaga taatgagggg ttaccaggat tatttctggc cgcagggaaa gggaatatcg
     4081 aggctatgat ggcatatata aatatatgcc atcatagtgg gataaaactt acagaaatag
     4141 cagacagact taacaataat gaacaagaca tgtttaatat tatttctgac aaaatacaag
     4201 agttgtttta agtgtgctaa atagctgcaa agaattgcac ttagaaggag ctctccccga
     4261 attgtgtgat ctgcttaatt tctaaaaaga aacaaacagt taactagact gagcgatact
     4321 acccatagaa ccagtttccc atgacgaacg acactggacg caaaaacaat cataaaaaac
     4381 acaataaatg taatgaacac atcccaccct attaagtaaa gtgcactgtg atagaggaag
     4441 ggaaatacag gaaggtgtgg agccttgcag atttctggca tcatagtgcc caatacggaa
     4501 tgcataaagc cccctcagac tggagactcc acaaatgaaa tatacagtgt ttaattatat
     4561 caagtgcgat tacaatcgct gacgacggca cagttggtgt ggaggtctca gtcctgaaca
     4621 atttgaaaac cagaacctca cttaagcctg tgttcatatt acgtgggtag gatcatactt
     4681 ttatagaagc tgtcagtggc tacgtcccag ctaaatcact tcatgctcca gcgccagaga
     4741 ggcaaggttg ggtttgctca gctgccggtt gattttgttg cgattgaacc ggacagcgcc
     4801 cagggtgtcg gcaaaagagc gaatctcacc aatcgttgtt tcattatccg cattaacgat
     4861 agcttcaaga aacgccaagg ttttatcgaa ttcatcagca acagtggctc cgggcatacc
     4921 gtgaccgttt atacaaaaag gcgttttcag cgtggagttt tcatgaatag cctcaacacg
     4981 aatgtcgtga agccagtgat gtatcggcta cgatcctcag ctgatgccag accataggac
     5041 tgacactacg aacagcaatt ttaatgacgt aaatcttcat aactacaact aacagggcat
     5101 cattatgaat gatgccggtt attttaccgc tgttggtccc ttcatttagg gactgcccca
     5161 agttttttca tactctcttt ctcagagagt ttagtctctg ggattccaga cggtccatca
     5221 ttgagccaag ggagtaaaga actcaaagca tttacagaat tgtttgaatc agctaaaata
     5281 atgacaatgt tactatttta catgacaaag tgattataat gcttggaaca tcttttaata
     5341 attttggaat cagtttatct cacaaaagat atttttcagg aaaggttgat gagattatcc
     5401 gctgtacaat ggggaaaagg atagtaaaaa tatcatcaac caaaataaat actagtattt
     5461 tgagctctgt ttcagaacaa atcggtgaaa atattacaga ttggaaaaat gatgaaaaaa
     5521 aagtctacgt atcccgggtg gtaaaccaat gtattgataa gttttgtgca gaacacagcc
     5581 gaaaaatcgg cgataatctc cgtaaacaga tatttaaaca ggttgagaaa gattatcaca
     5641 tttctctaga catcaatgct gcacaaagtt ccataaatca tcttgtatca ggaagcagtt
     5701 atttcaaaaa gaaaatggac gaactttgtg aagggatgaa tagaagcgtt aaaaatgata
     5761 caacaagcaa tgttgcaaat cttatttccg atcagttttt tgagaaaaat gtgcaatata
     5821 ttgatctaaa gaaattacgt gggaatatga gtgattatat tacaaattta gaatcgcctt
     5881 tctgatgaca gaacatcccg agtaaagaaa ctaagaaaag taaataccca ggaattgcct
     5941 gagcggtgct atatttctcc tcgcaagtaa gtcctaatat attgaattgt tgtatagcca
     6001 gtttttgtat tttcctagct catggatgtg ggatccctct cccctttctc tgctcaaagg
     6061 taagcggctc gtcagaatca tattgatatt tactgagaag tcagatcaac tttccaaggc
     6121 aacagatcgc gtacccggtt tgccggtcag tcctggatat gttcaataac gtaacgcagc
     6181 catttttctg gctccacatt gttcagacgg catgtgccga tcagcgagaa caacaccgct
     6241 gcatgttcgt caccgctgtc ggaacctgcg agtcgagtca gccggagaga gtttcactct
     6301 ccggctgctc acggaaccgt acgtgacact ctcgcgtcat acggctcttg atcactcatt
     6361 cgatgcacgt agtaaatacc agtgagcaaa ttgatcttac ccagcaatac ggtcagttac
     6421 cgcgcacatg gcctgcctgt gtcagaaaat ctgctggagc aggattttta cgccagtggt
     6481 ccgaaccaga agtgggcggg agacatcacg tacttacgta cagatgaagg ctggctgtat
     6541 ctggctgtgg tcattgacct gtggtcacgt gccgttattg gctggtccat gtcaccacgc
     6601 ctgacggcgc aactggcctg cgatgccctg cagatggcgc tgtggcggcg taagagaccc
     6661 cggaacgtta tcgttcactc ggaccgagga agtcagtact gttcagcaga ttatcaggcg
     6721 ctgctgaagt ggcataatct gcgtggcagt atgagcgcaa agggctgctg ctacgataat
     6781 gcctgcgtgg aaagcttctt tcattcgctg aaagtggaat gtctccacgg agaacacttt
     6841 atcagccggg aaataatgcg ggcaacagtg tttaattata tcgaatgtga ttacaatcgc
     6901 tggcgacggc acagttggtg tggcggcctc agtccggaac aatttgaaaa ccagaacctc
     6961 gcttaggcct gtgtccatat tacgtgggta ggatcac
//
LOCUS       DAJVUK010000190         6806 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.190, whole genome shotgun sequence.
ACCESSION   DAJVUK010000190 DAJVUK010000000
VERSION     DAJVUK010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6806
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.190"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            331..423
                     /locus_tag="OQQ57_003796"
                     /pseudo
     CDS             331..423
                     /locus_tag="OQQ57_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004120448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            427..606
                     /locus_tag="OQQ57_003797"
                     /pseudo
     CDS             427..606
                     /locus_tag="OQQ57_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
     gene            940..3219
                     /gene="ydeP"
                     /locus_tag="OQQ57_003798"
     CDS             940..3219
                     /gene="ydeP"
                     /locus_tag="OQQ57_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HCS1958376.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
                     LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            3467..3664
                     /gene="safA"
                     /locus_tag="OQQ57_003799"
     CDS             3467..3664
                     /gene="safA"
                     /locus_tag="OQQ57_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HCS1958377.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRIARDLTHFIINSLQD"
     gene            3739..4500
                     /gene="ydeO"
                     /locus_tag="OQQ57_003800"
     CDS             3739..4500
                     /gene="ydeO"
                     /locus_tag="OQQ57_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HCS1958378.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMSALAI"
     gene            4902..6584
                     /locus_tag="OQQ57_003801"
     CDS             4902..6584
                     /locus_tag="OQQ57_003801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HCS1958379.1"
                     /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF
                     SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI
                     EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGI
                     PLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQ
                     NRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPF
                     MLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQ
                     YDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKL
                     ISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEE
                     NIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYNLTD
                     LQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
     gene            6636..>6806
                     /locus_tag="OQQ57_003802"
     CDS             6636..>6806
                     /locus_tag="OQQ57_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCS1958380.1"
                     /translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK
                     QYIAASGNQVYFT"
BASE COUNT         1962 a         1479 c         1500 g         1865 t
ORIGIN      
        1 tggtgacggc agttgaaacc aatgtgttga ggttgcatgg acggttaagc cgagaatacg
       61 gtagtaagtg agatatgggg tttggtcgtt gttaatgagc aaccatgacc gccaacgact
      121 ggattctccc ttggtttatg ttggtgcgca taatgtatat tatgttaaat catatctgag
      181 tgatgcgaag tgcttttctg gtagtcggta ttcgttcagg gttccagaac ttaagcctct
      241 cctctttcat aattggcctg tgcatgacgg atataggctg gctggtatgc agatttgccg
      301 tttgccgcat cttcccagcg ttgaagactc aagctggcaa accgcgtgca aatgagcacg
      361 ccctctttcc atcaacactt caggcagctt gcgggaatga gtccactacg gtatcagaaa
      421 tgggaagtgg gtgtctctct gatgcgtaat ggaaaaatac tggctacggg agaaaatgtc
      481 tccctgggga cagtaaataa aagcaaagta tctctgggtt taagcgcaac ctatggacaa
      541 acaggaaaca aggttgcagc cggaaccgtc cagtcagtca ttggtgtcac ttttatctat
      601 gaataattgt gattttgatc ttagtctatg cgctccattc acgaaaattg cgcggataat
      661 tattttgtga aggctattat cctacacctg taagaaaatc cgcgcacaat tgaagccaga
      721 gtcttatttt ttatattgaa aaatatgtta atttaaacac tatgagagat gatgcttaac
      781 ttatcgtatt taatctattg tttaacgata atagattaaa aatagaaaga gagtagtccc
      841 ctactcttat atatccatgt tggcgataat ccctttgtat gtactgtgca tcatcgctat
      901 tacaaatcct aataattcat ttccacacag gataagtaga tgaagaaaaa aattgaatcc
      961 taccagggtg ctgcaggtgg ttggggtgct gttaaatccg tagcgaatgc agtacgtaag
     1021 cagatggata tacgccagga tgttattgcc atgtttgaca tgaataagcc agagggcttt
     1081 gactgtccgg gttgtgcatg gccagatcct aagcacactg cgtcattcga catttgtgaa
     1141 aacggcgcaa aagcaatcgc ctgggaagtc acggataagc aggtaaatgc ctctttcttt
     1201 gctgagaata cggttcaatc attacttacc tggggagatc acgagcttga ggctgcggga
     1261 cgtctcactc agcctttgaa atatgatgcc gtcagcgact gttacaagcc attaagctgg
     1321 caacaagctt tcgacgaaat tggcgcacgc cttcaaagct atagtgatcc caatcaggtt
     1381 gaattctata cttcgggccg cacttccaat gaagctgcct ttctttatca gctttttgcc
     1441 cgtgaatacg ggagcaataa ctttcccgac tgctccaaca tgtgccatga accgaccagt
     1501 gtgggtttgg cagcgagtat cggcgtgggt aaagggactg tgttgctgga agactttgag
     1561 aagtgcgatt tagtcatttg cattgggcat aaccctggta caaaccaccc ccgcatgctg
     1621 acttcgttgc gcgctttagt gaaacgggga gcgaaaatga tcgccatcaa tcctttacag
     1681 gaacgtggcc tggagcgatt taccgcaccg caaaacccgt ttgaaatgct gacgaactct
     1741 gagactcagt tggccagtgc gtactacaac gtgcgcattg gtggcgatat ggcgttgctc
     1801 aaggggatga tgcgcctgtt aattgagcgc gatgatgctg caagtgccgc aggtcggccc
     1861 tcattgcttg atgacgaatt tattcaaacg cataccgtcg gctttgacga gctacgccgt
     1921 gacgttctca attccgagtg gaaagatatc gaacatattt ctggactaag tcagacacaa
     1981 atcgccgaac tggctgacgc atatgccgct gccgatcgca ccattatctg ttacggaatg
     2041 gggatcactc agcacgaaca tggtacccag aatgtacagc aactggtcaa tctgctgttg
     2101 atgaaaggta acattggcaa gcctggtgcg ggtatctgcc cactacgagg tcactctaat
     2161 gtacagggcg accgaaccgt cggtatcacc gagaaaccgt ctgcagagtt tctggctcgc
     2221 ctgggtgagc gctatggctt caccccacct catgcacctg gacatgctgc aattgccagc
     2281 atgcaagcaa tatgcacggg gcaggctcga gcattgatct gcatgggggg caactttgca
     2341 ctggcaatgc cagatcggga agcgagcgct gtaccgttaa cgcaattaga tttggcggta
     2401 cacgtagcca ctaagcttaa ccgctctcat ctgctgaccg cacggcatag ctatattctg
     2461 ccggttctgg ggcgtagcga gattgacatg caaaaaagcg gtgcgcaggc ggtaaccgtt
     2521 gaggattcaa tgtcgatgat tcatgcctcg cgtggcgtgt taaaacccgc cggtgtaatg
     2581 ctgaaatcag agtgtgcagt ggtcgcggga atcgcgcagg cagcactacc ccagagcgtg
     2641 gtagcctggg agtatctggt ggaagattat gatcgcattc gcaatgacat tgaagctgtg
     2701 ttaccagagt tcgccgacta taaccagcgc atccgacatc ctggaggttt tcacctgata
     2761 aatgcagctg ctgaaaggcg ctggatgacg ccgtcaggta aggctaattt cattaccagc
     2821 aaagggctgt tagaagatcc ctcttcagcg tttaacagta agctggtcat ggcgacagta
     2881 cgcagccacg atcagtacaa cacgacgatt tatggtatgg atgatcgcta tcgaggggta
     2941 ttcggtcaac gagatgtggt ctttatgagt gctaaacaag ctaaaatttg ccgtgtaaaa
     3001 aacggcgaaa gagttaatct tattgcgctt acgccagacg gtaagcgcag ctcacgccgc
     3061 atggatagat taaaagtggt catttaccct atggctgacc gctcactggt gacctatttt
     3121 ccagaatcga atcacatgct aactcttgat aaccacgatc cattaagtgg cattcctggt
     3181 tataaaagta ttccggttga attagaacca tcaaattaat tcgcctcctc atttcttctg
     3241 ctgtcatccg cacagcagaa gaatttctca ttgactatta tcgcgcaatt tgctcacatt
     3301 gatcaaatta aaccacacac tataagatat aaacctctgc ctacagctgt aagaaactcc
     3361 gctcagtact gaagtgccag tcctatttcc tcttttctcc agcctgttat attaagcata
     3421 ctgattaaca atttttaacg ttatccgcta aataaacata tttgaaatgc atgcgaccac
     3481 agtgaaaaac aaaatcacgc aaagagacaa ctataaagaa atcatgtctg taattgtggt
     3541 tgtcttatta ctgaccctta cgttgatagc cattttttcg gcaattgatc agctgggtat
     3601 ttcagaaatg ggtcgcattg caagagatct tacacatttc attatcaata gtttgcaaga
     3661 ctgaaaataa acagcaaatt ataaatatga aatgttaaaa aagtatcgat aaaaacttta
     3721 ttgttttaag gagataaaat gtcgctcgtt tgttctgtta tatttattca tcatgccttc
     3781 aacgctaaca ttttagataa agattacgcc ttctctgacg gcgagatcct gatggtagat
     3841 aacgctgttc gtacgcattt tgaaccttat gagcggcatt ttaaagagat cggatttact
     3901 gaaaatacca ttaaaaaata tctacaatgc actaacatcc agacagtgac ggtgcctgtt
     3961 cctgcgaagt ttttacgtgc ttcaaatgta ccgactggat tgcttaatga aatgattgct
     4021 tatctcaact cggaagaacg caatcatcat aatttttcag aacttttgct tttttcttgc
     4081 ctgtctattt ttgccgcatg caaaggtttc attacactat taactaacgg tgtgctatcc
     4141 gtttccggaa aagtgagaaa tattgtcaac atgaagctgg cgcacccatg gaagctgaaa
     4201 gatatttgtg actgcctgta catcagtgaa agcctgttga agaaaaaact aaagcaagag
     4261 caaacgacat tctcacagat tctattagat gccagaatgc agcacgcaaa aaatttgata
     4321 cgcgtagaag gttcagtcaa taaaattgcc gaacaatgtg gttatgccag tacttcttat
     4381 tttatttatg cgttccgcaa acatttcggc aacagtccga agagagtttc taaggagtac
     4441 cgttgtcaaa gtcacacggg tatgaatacg ggcaacacga tgagtgcttt agctatttga
     4501 ttatttgcta acgagtagtc aaccacgcac gctacgtaag aattatatgg ggcagccatt
     4561 ccctgccccg cgttgttttt aggcgatata tttattgaaa taaataagtg acatccatca
     4621 catatttatg cacttgcata acctgttgca tgattattta tgttctcaat tcagcatttt
     4681 gtcagtaaaa tgcaataatt tattaaatat caataaatta gttgtttatc ggcgagaaat
     4741 tacttaatag aacagaaagt aatgtcaacg ctttatggac tgttatttcc ctttttttag
     4801 ctaaatctgc tatctcttta tgtgactaac ttcacttaca tccacttatt tctcttcgta
     4861 aaattacttc ggaattaagt acaataagaa gaggaacatt tatgaagtct gcattaaaga
     4921 aaagtgtcgt aagtacctcg atatctttga tactggcatc tggtatggct gcatttgctg
     4981 ctcatgcggc agatgatgta aagctgaaag caaccaaaac aaacgttgct ttctcagact
     5041 ttacgccgac tgaatacagt accaaaggaa agccaaatat tatcgtacta accatggatg
     5101 atcttggtta tggacaactt ccttttgata agggatcttt tgacccaaaa acaatggaaa
     5161 atcgtgaagt tgtcgatacc tacaaaatag ggatagataa agccattgaa gctgcacaaa
     5221 aatcaacgcc gacgctcctt tcattaatgg atgaaggcgt acgttttact aacggctatg
     5281 tggcacacgg tgtttccggc ccctcccgtg ccgcaataat gaccggtcga gctcccgccc
     5341 gctttggtgt ctattccaat accgatgctc aggatggtat tccgctaaca gaaactttct
     5401 tgcctgaatt attccagaat catggttatt acactgcagc agtaggtaaa tggcacttgt
     5461 caaaaatcag taatgtgccg gtaccggaag ataaacaaac gcgtgactat catgacaact
     5521 tcaccacatt ttctgcggaa gaatggcaac ctcaaaaccg tggctttgat tactttatgg
     5581 gattccacgc tgcaggaacg gcatattaca actccccttc actgttcaaa aatcgtgaac
     5641 gtgtccccgc aaaaggttat atcagcgatc agttaaccga tgaggcaatt ggcgttgttg
     5701 atcgtgccaa aacacttgac cagcctttta tgctttacct ggcttataat gctccgcacc
     5761 tgccaaatga taatcctgca ccggatcaat atcagaagca atttaatacc ggtagtcaaa
     5821 cagcagataa ctactacgct tccgtttatt ctgttgatca gggtgtaaaa cgcattctcg
     5881 aacaactgaa gaaaaacgga cagtatgata atactattat tctctttacc tccgataatg
     5941 gtgcggttat cgatggtcct ctgccgctga acggggcgca aaaaggctat aagagtcaga
     6001 cctatcctgg cggtactcac accccaatgt ttatgtggtg gaaaggaaaa cttcaacccg
     6061 gtaattatga caagctgatt tccgcaatgg atttctaccc gacagctctt gatgcagccg
     6121 atatcagcat tccaaaagac cttaagctgg atggcgtttc cttgctgccc tggttgcaag
     6181 ataagaaaca aggcgagcca cataaaaatc tgacctggat aacctcttat tctcactggt
     6241 ttgacgagga aaatattcca ttctgggata attaccacaa atttgttcgc catcagtcag
     6301 acgattaccc gcataacccc aacactgagg acttaagcca attctcttat acggtgagaa
     6361 ataacgatta ttcgcttgtc tatacagtag aaaacaatca gttaggtctc tacaatctga
     6421 cggatctaca gcaaaaagat aaccttgccg ccgccaatcc gcaggtcgtt aaagagatgc
     6481 aaggcgtggt aagagagttt atcgacagca gccagccacc gcttagcgag gtaaatcagg
     6541 agaagtttaa caatatcaag aaagcactaa gcgaagcgaa ataactaaac cttcatgcgg
     6601 cggaattttc cgccgcctta ttgagcgaga tagcgatgca cgttacagcc aagccctcca
     6661 gttttcaatg taatctcaaa tgtgattact gtttttacct tgaaaaagag tcgcagttta
     6721 ctcatgaaaa atggatggat gacagcactc tgaaagagtt catcaaacaa tatatcgcag
     6781 cgtctggcaa tcaggtctat tttacc
//
LOCUS       DAJVUK010000191         6804 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.191, whole genome shotgun sequence.
ACCESSION   DAJVUK010000191 DAJVUK010000000
VERSION     DAJVUK010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6804
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.191"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            188..2104
                     /gene="dnaK"
                     /locus_tag="OQQ57_003803"
     CDS             188..2104
                     /gene="dnaK"
                     /locus_tag="OQQ57_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HCS1958381.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            2193..3323
                     /gene="dnaJ"
                     /locus_tag="OQQ57_003804"
     CDS             2193..3323
                     /gene="dnaJ"
                     /locus_tag="OQQ57_003804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HCS1958382.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGQHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(3427..3579)
                     /gene="mokC"
                     /locus_tag="OQQ57_003805"
     CDS             complement(3427..3579)
                     /gene="mokC"
                     /locus_tag="OQQ57_003805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HCS1958383.1"
                     /translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF
                     TAYESE"
     gene            4165..5331
                     /gene="nhaA"
                     /locus_tag="OQQ57_003806"
     CDS             4165..5331
                     /gene="nhaA"
                     /locus_tag="OQQ57_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HCS1958384.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            5397..6296
                     /gene="nhaR"
                     /locus_tag="OQQ57_003807"
     CDS             5397..6296
                     /gene="nhaR"
                     /locus_tag="OQQ57_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HCS1958385.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
     gene            complement(6334..>6804)
                     /locus_tag="OQQ57_003808"
     CDS             complement(6334..>6804)
                     /locus_tag="OQQ57_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial family protein"
                     /protein_id="HCS1958386.1"
                     /translation="VRFNYNLNTILLVNLMTCGFEDQSIDTGRFVLSRINNENYQFHH
                     IRFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQVGFQLSND
                     GTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN"
BASE COUNT         1739 a         1602 c         1757 g         1706 t
ORIGIN      
        1 ttctgcgcaa aagcacaaaa aatttttgca tctccccctt gatgacgtgg gttacgaccc
       61 catttagtag tcaaccgcag tgagtgagtc tgcaaaaaaa tgaaattggg cagttgaaac
      121 cagacatttc gcccctatta cagactcaca accacatgat gaccgaatat atagtggaga
      181 cgtttagatg ggtaaaataa ttggtatcga cctgggtact accaactctt gtgtagcgat
      241 tatggatggc accactcctc gcgtgctgga gaacgccgaa ggcgatcgca ccacgccttc
      301 tattattgcc tatacccagg atggtgaaac tctggttggt cagccggcta aacgtcaggc
      361 agtgacgaac ccgcaaaaca ccctgtttgc gattaaacgc ctgattggcc gccgcttcca
      421 ggacgaagaa gtacagcgtg atgtttccat catgccgttc aaaattattg ctgctgataa
      481 cggcgacgca tgggtcgaag ttaaaggcca gaaaatggca ccgccgcaga tttctgctga
      541 agtgctgaaa aaaatgaaga aaaccgctga agattacttg ggtgaaccgg taactgaagc
      601 tgttatcacc gtaccggcat actttaacga tgctcagcgt caggcaacca aagacgcagg
      661 ccgtatcgct ggtctggaag taaaacgtat catcaacgaa ccgaccgcag ctgcgctggc
      721 ttacggtctg gacaaaggta ctggcaaccg tactatcgcg gtttatgacc tggggggtgg
      781 tactttcgat atttctatta tcgaaatcga cgaagttgat ggcgaaaaaa ccttcgaagt
      841 tctggctacc aacggtgata cccacctggg tggtgaagac ttcgacagcc gtctgatcaa
      901 ctacctggtt gaagaattca agaaagatca gggcattgac ctgcgcaacg atccgctggc
      961 aatgcagcgc ctgaaagaag cggcagaaaa agcgaaaatc gaactgtctt ccgctcagca
     1021 gaccgacgtt aacctgccgt acatcactgc agatgcgacc ggtccgaaac acatgaacat
     1081 caaagtgact cgtgcgaaac tggaaagctt ggttgaagat ctggtaaacc gttccattga
     1141 gccgctgaaa gttgcactgc aggacgctgg cctgtccgta tctgatatcg acgacgttat
     1201 cctcgttggt ggtcagactc gtatgccaat ggttcagaag aaagttgctg agttctttgg
     1261 taaagagccg cgtaaagacg ttaacccgga cgaagctgta gcaatcggtg ctgctgttca
     1321 gggtggtgtt ctgactggtg acgtgaaaga cgtactgctg ctggacgtta ccccgctgtc
     1381 tctgggtatc gaaaccatgg gcggtgtgat gacgacgctg atcgcgaaaa acaccactat
     1441 cccgaccaag cacagccagg tgttctctac cgctgaagac aaccagtctg cggtaaccat
     1501 ccatgtgctg cagggtgaac gtaaacgtgc ggctgataac aaatctctgg gtcagttcaa
     1561 cctggatggt atcaacccgg caccgcgcgg catgccgcag atcgaagtta ccttcgatat
     1621 cgatgctgac ggtatcctgc acgtttccgc gaaagataaa aacagcggta aagagcagaa
     1681 gatcaccatc aaggcttctt ctggtctgaa cgaagatgaa atccagaaaa tggtacgcga
     1741 cgcagaagct aacgccgaag ctgaccgtaa gtttgaagag ctggtacaga ctcgcaacca
     1801 gggcgaccat ctgctgcaca gcacccgtaa gcaggttgaa gaagcaggcg acaaactgcc
     1861 ggctgacgac aaaactgcta tcgagtctgc actgactgca ctggaaactg ctctgaaagg
     1921 tgaagacaaa gccgctatcg aagcgaaaat gcaggagctg gcacaggttt cccagaaact
     1981 gatggaaatc gcccagcagc aacatgccca gcagcagact gccggtgctg atgcttctgc
     2041 aaacaacgcg aaagatgacg atgttgtcga cgctgaattt gaagaagtca aagacaaaaa
     2101 ataatcgccc tataaacggg taattatact gacacgggcg aaggggaatt tcctctccgc
     2161 ccgtgcattc atctaggggc aatttaaaaa agatggctaa gcaagattat tacgagattt
     2221 taggcgtttc caaaacagcg gaagagcgtg aaatcaaaaa ggcctacaaa cgcctggcca
     2281 tgaaatacca cccggaccgt aaccagggtg acaaagaggc cgaggcgaaa tttaaagaga
     2341 tcaaggaagc ttatgaagtt ctgaccgact cgcaaaaacg tgcggcatac gatcagtatg
     2401 gtcatgctgc gtttgagcaa ggcggcatgg gcggcggcgg ttttggcggc ggcgcagact
     2461 tcagcgatat ttttggtgac gttttcggcg atatttttgg cggcggacgt ggtcgtcaac
     2521 gtgcggcgcg cggtgctgat ttacgctata acatggagct caccctcgaa gaagctgtac
     2581 gtggcgtgac caaagagatc cgcattccga ctctggaaga gtgtgacgtt tgccacggta
     2641 gcggtgcaaa accaggtaca cagccgcaga cctgtccgac ctgtcatggt tctggtcagg
     2701 tgcagatgcg tcagggtttc tttgccgtgc agcagacctg tccacactgt cagggccgcg
     2761 gtacgctgat caaagatccg tgcaacaaat gtcatggtca tggtcgtgtt gagcgcagca
     2821 aaacgctgtc cgttaaaatc ccggcagggg tggacactgg agaccgcatc cgtcttgcgg
     2881 gcgaaggtga agcgggccag catggcgcac cggcaggcga tctgtacgtt caggttcagg
     2941 ttaaacagca cccgattttc gagcgtgaag gcaacaacct gtattgcgaa gtcccgatca
     3001 acttcgctat ggcggcgctg ggtggcgaaa tcgaagtacc gacccttgat ggtcgcgtca
     3061 aactgaaagt gcctggcgaa acccagaccg gtaagctttt ccgtatgcgc ggtaaaggcg
     3121 tcaagtctgt ccgcggtggc gcacagggtg atttgctgtg ccgcgttgtc gtcgaaacac
     3181 cggtaggcct gaacgagaag cagaaacagc tgctgcaaga gctgcaagaa agcttcggtg
     3241 gcccaaccgg cgagcacaac agcccgcgct caaagagctt ctttgatggt gtgaagaagt
     3301 tttttgacga cctgacccgc taacctcccc aaaagcctgc ccgtgggcag gcctgggtaa
     3361 aaatagggtg cgttgaagat atgcgagcac ctgtaaagtg gcggggatca ctccccgccg
     3421 ttgctcttac tcggattcgt aagccgtgaa aacagcaacc tccgtctggc cagttcggat
     3481 gtgaacctca cagaggtctt ttctcgttac cagcgccgcc actacggcgg tgatacagat
     3541 gacgatcagg gcgacaatca tcgccttatg ctgcttcatt gctctcttct ccttgacctt
     3601 acggtcagta agaggcactc tacatgtgtt cagcatatag ggggcctcgg gttgatggta
     3661 aaatatcact cggggctttt ctctatctgc cgttcagcta atgcctgaga cagacagcct
     3721 caagcacccg ccgctattat atcgctctct ttaacccatt ttgttttatc gattctaatc
     3781 ctgaagacgc ctcgcatttt tgtggcgtaa ttttttaatg atttaattat ttaactttaa
     3841 tttatctctt tatcgcaatt attgacgaca agctggatta tttttgaaat attgtcctaa
     3901 caaataacgc cgactgacaa gaaattaatt attacttttc ctaattaatc cctcagaaat
     3961 cctcacctta agctatgatt atctgagctt agggtcactc gtcagcgctt acagccgtca
     4021 aaaactcatc tcaccgctga tggcgaaaat tctacaaagg ctcgtaaaaa acgaattatt
     4081 cctacactat aatctgattt taacgatgat tcgtgcgggg taaaatagta aaaacgattt
     4141 attcacctga aagagaaata aaaagtgaaa catctgcatc gattctttag cagtgatgcc
     4201 tcgggaggca ttattcttat cattgccgct atcctggcga tgatgatggc caacagcggc
     4261 gcaaccagtg gatggtatca cgactttctg gagacgccgg ttcagctccg ggttggttca
     4321 ctcgaaatca acaaaaacat gctgttatgg ataaatgacg cgctgatggc ggtatttttc
     4381 ctgttagtcg gtctggaagt taaacgtgaa ctgatgcaag gatcgctagc cagcttacgc
     4441 caggccgcat ttccagttat cgccgctatt ggtgggatga ttgtgccggc attactctat
     4501 ctggccttta actatgccga tccgattacc cgcgaagggt gggcgatccc ggcggctact
     4561 gacattgcct ttgcacttgg agtgctggcg ctgttgggaa gtcgtgttcc gttagcactg
     4621 aagatctttt tgatggctct ggctattatc gacgatcttg gggccatcat tatcatcgca
     4681 ttgttctaca ctaatgactt atcgatggcc tctcttggcg tcgcggctgt agcaattgcg
     4741 gtactcgcgg tattgaatct gtgtggtgta cgccgcacgg gcgtctatat tctggttggc
     4801 gtagtgttgt ggactgcggt gttgaaatcg ggggttcacg caaccttggc gggggtaatt
     4861 gtcggcttct ttattccttt gaaagagaag catgggcgtt ctccagcgaa gcgactggag
     4921 catgtgttac acccgtgggt ggcgtatctg attttgccgc tgtttgcatt tgctaatgct
     4981 ggcgtttcac tgcaaggcgt cacgctggat ggcttgacct ccattctgcc attggggatc
     5041 atcgctggct tgctgattgg caaaccgctg gggattagtc tgttctgctg gttggcgctg
     5101 cgtttgaaac tggcgcatct gcctgaggga acgacttatc agcaaattat ggcggtgggg
     5161 atcctgtgcg gtatcggttt tactatgtct atctttattg ccagcctggc ctttggtagc
     5221 gtagatccag aactgattaa ctgggcgaaa ctcggtatcc tggtcggttc tatctcttcg
     5281 gcggtaattg gatacagctg gttacgcgtt cgtttgcgtc catcagtgtg acaggacggt
     5341 ttaccgggga gccataaacg gctccctttt cattgttatc agggagagaa atgagcatgt
     5401 ctcatatcaa ttacaaccac ttgtattact tctggcatgt ctataaagaa ggttccgtgg
     5461 ttggcgcagc ggaggcgctt tatttaactc cacaaaccat taccggacag atccgggctc
     5521 tggaagagcg cctgcaaggc aaattattta agcgcaaggg acgtggtctc gaacccagcg
     5581 agctgggaga actggtctat cgctatgccg ataaaatgtt caccttaagc caggaaatgc
     5641 tggatattgt gaactatcgc aaagaatcca atttattgtt tgacgttggc gtggctgatg
     5701 cactttccaa acgcctggtc agtagcgtgc tgaatgctgc agtggtagaa ggcgagccga
     5761 ttcatcttcg ctgcttcgaa tccacccacg aaatgctact ggagcaatta agccagcata
     5821 aactggatat gatcatttcc gactgtccga tagactctac gcagcaggaa ggcctgttct
     5881 ccgtgagaat tggcgaatgt ggcgtgagtt tctggtgtac aaatccacca ccagaaaaac
     5941 cgttcccggc ttgtctggaa gaacggcgac ttttgattcc tgggcgacgt tcaatgttag
     6001 ggcgcaaatt gcttaactgg tttaactccc agggattaaa cgtagaaatc ctcggcgagt
     6061 ttgatgatgc cgcgttgatg aaagcttttg gtgcaatgca caatgcaatc ttcgttgccc
     6121 caacgcttta tgcatatgac ttttatgccg ataaaactgt cgtagaaatt ggtcgcgtcg
     6181 agaatgtgat ggaagagtac catgctattt ttgctgagcg gatgattcag cacccggcgg
     6241 tacagcgaat ctgcaatacg gattattctg cgctttttag tccagcggcg cgttaatcgg
     6301 cagctccccc aaagttaaag tggaggagat agattagttg tacataacca cgattttgac
     6361 tcggctcatt atttgcccgc ttgagacatt atttccatat gtacgcgggc gaataaatag
     6421 aggaatctga ttacttcctt catggggatg ctgaaaagag tagtaattgc ttttaccata
     6481 ctggatttca ttcgtaccat cattggagag ttgaaagcct acttgacccg caccgtcctc
     6541 actgttttct aactcatttt ttaatatgct ggttcctgac tcctgtatcg tcactggttc
     6601 aaagtaatat tcaacatcac tgggttcaaa aactaattca ccttgctcgc cctggatgca
     6661 gtcaaatctt atatgatgaa actgataatt ttcattattg atacgagaca gtacaaatcg
     6721 tccagtgtcg atggattgat cttcaaaacc acaggtcatt aaatttacca gtaaaatagt
     6781 atttaaatta taattaaagc ggac
//
LOCUS       DAJVUK010000192         6790 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.192, whole genome shotgun sequence.
ACCESSION   DAJVUK010000192 DAJVUK010000000
VERSION     DAJVUK010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6790
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.192"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(85..900)
                     /gene="sul2"
                     /locus_tag="OQQ57_003809"
     CDS             complement(85..900)
                     /gene="sul2"
                     /locus_tag="OQQ57_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HCS1958387.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            2089..2238
                     /locus_tag="OQQ57_003810"
     CDS             2089..2238
                     /locus_tag="OQQ57_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017880354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958388.1"
                     /translation="MPSEYDEQLDSTDTQLPGEYDLFDLMAQVTEENLHAPVDFGSPV
                     GREAL"
     gene            complement(3005..3445)
                     /locus_tag="OQQ57_003811"
     CDS             complement(3005..3445)
                     /locus_tag="OQQ57_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001749639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HCS1958389.1"
                     /translation="MAWHTVQETLKLTGKSRSQLYRDMAKGLVSYRTGKNDRREFETS
                     ELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKLDALQQTVTLMLEDKMA
                     REAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSGSE"
     gene            3663..4052
                     /locus_tag="OQQ57_003812"
     CDS             3663..4052
                     /locus_tag="OQQ57_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958390.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            4096..4500
                     /locus_tag="OQQ57_003813"
                     /pseudo
     CDS             4096..4500
                     /locus_tag="OQQ57_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            complement(4607..5443)
                     /locus_tag="OQQ57_003814"
     CDS             complement(4607..5443)
                     /locus_tag="OQQ57_003814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCS1958391.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(5443..5718)
                     /locus_tag="OQQ57_003815"
                     /pseudo
     CDS             complement(5443..5718)
                     /locus_tag="OQQ57_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase APH(3')"
     gene            complement(5793..6266)
                     /locus_tag="OQQ57_003816"
     CDS             complement(5793..6266)
                     /locus_tag="OQQ57_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA14"
                     /protein_id="HCS1958392.1"
                     /translation="MKVSLIAAKAKNGVIGCGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSGWTSNDDNVVVFQSIEEAMDRLAEFTGHVIVSGGGEI
                     YRETLPMASTLHLSTIDIEPEGDVFFPSIPNTFEVVFEQHFTSNINYCYQIWKKG"
     gene            complement(6287..6790)
                     /locus_tag="OQQ57_003817"
                     /pseudo
     CDS             complement(6287..6790)
                     /locus_tag="OQQ57_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
BASE COUNT         1585 a         1758 c         1771 g         1676 t
ORIGIN      
        1 aaaaaaaata ttagttcgat tcaatggagg ttccttcagt tttctgatga agcgcgaata
       61 tagagaaata tcccgaatgt gcagttaacg aattcttgcg gtttctttca gcgccgccaa
      121 taccgccagc ccgtcgcgca aggggcgcgg ctcgtgtgtg cggatgaagt cagctccacc
      181 tgcggcggcg gcaagctctg cagcgagtgt cgcggccccg acatcccccg gaccacggcc
      241 tgtgagcgcg cgcagaaagg atttgcgcga aacagacaga agcaccggca aatcgaagcg
      301 cagccgcaat tcatcgaacc gcgccagcac cgagagcgag gtttcgggag cagcccccag
      361 aaaaaacccc atgccgggat caaggacaag gcggttgcgt ttgataccgg cacccgtcag
      421 cgccgcgatg cgcgcgtcaa agaacgccgc aatgtgatcc atgatgtcgc cagcgggtgc
      481 ctcgcgccga tctgcctgcc cgtcttgcac cgaatgcata acgacgagtt tggcagatga
      541 tttcgccaat tgcggataga acgcagcgtc tggaaaaccg cgaatatcat tgagataggc
      601 cacaccacgc gacaaggcat aggcttgcgt cgcgggttga taactgtcga gcgagacggg
      661 aatgccatct gccttgagcg cgtccagcac cggcgcgata cgcgcgattt ctgtgtcgga
      721 cgaaacaggc gcggcgtcgg gattgctgga tgccggaccg aggtcgatca catctgcccc
      781 ctcggccatc agcttacgcg cctgcgcaat ggctgcgtct ggcgccagat accggcctcc
      841 atcggagaaa ctgtccgagg ttatgttgac gatgccgaaa atgatgagcg atttattcat
      901 gggggcttct ataataataa taatcgagca tgagtctcat acggatgctc gggtcgaaag
      961 ggaatcccca ggcgagtaac ctgtttgcgg tgatccgttt catgatgatg tatctgtagc
     1021 attttggaaa taaatatatc atctctcaat aagtagatat atttatcttt tttgcttctt
     1081 tggtgctgca agtcaccaat acgagggaaa cctgttacgg agcggtttaa ccgtaatcaa
     1141 cagtgactgg tgtcatgttc ggaagattaa ttgatagtaa tctacaaagg atcttcttga
     1201 gatccttttc aatgaatcgt aatctcttgc tctgtaaacg aaaaaaccgc ctggggaggc
     1261 ggtttgttcg aaggttaagt cagttgggga actgcttaac ccggtaacag ggttcacgag
     1321 accgccatta ccaaaactgt tctttcagtg tagccgcagt caggcctcta cttcaagacc
     1381 tcttaatcta tcttctcgtg cactcctgtt actaatggct gctgccagtg gcgttttgtc
     1441 gtgtctttcc gggttggact caagttgata gttaccggac aaggcgcagc ggtcggactg
     1501 aacggggggt tcgtgcatac agtccagctt ggagcgaact gccttcacgg aactgagtgt
     1561 caggcgtgga atgagaaacc gcggccataa cagcggaatg acaccggtaa accgaaaggc
     1621 aggaacagga gagcgcacga gggagctacc agggggaaac gcctgggatc tttatagtcc
     1681 tgtcgggttt cgccaccact gatttgagcg tcagattttg cgatgcttgt caggggggcg
     1741 gagcctatgg aaaaacggct tcgccgtggc cttatctctt ctttgctaag tgtcttcttg
     1801 gtatcttcca ggaaatttcc gtccccgtcc gtaagccggt accgctcgcc gcagccgaac
     1861 gaccgagcgt agcgagtcag tgagcgagga agcggaatat ctcctgtatc gcatattctg
     1921 ctgacgcgcc ggtgctgcct tttttctcct gccacatgaa gcacttcact gattttcgca
     1981 atcgtggcaa catagtaagc cagtatacac tccgctagcg ctacatgact ggttcagggc
     2041 tgcgccccga aacccgctaa caacctctca gctactggat atcaccccat gccatctgaa
     2101 tatgatgaac aactggattc gactgatacg cagcttcccg gcgaatatga cctttttgat
     2161 ttaatggcgc aggttactga agagaacctg catgcccctg tggattttgg gtcgcctgtc
     2221 ggccgggaag cgttatagct ttttcgcttg cccgcgtacg tggtaatact ccggtattac
     2281 cttttatttc tttattttca tgtaattaca gtggattttt aatacccggg tattactcgt
     2341 gaaaacgaaa tattcctttt ttttctttta attcatgcag ttgcgatgaa aatcgcggct
     2401 gcgttaggtg tatgaccatt ttgaggttga aaaataatca accatggcgg gtgatttacg
     2461 caggttaagg ggagatcgtg acaaaaaaag cgttcctcac tgtatcgttc atgcctgcat
     2521 gaacgggtta ttcttcctga ctacagaatt acatcgctcc ttcagttcat acatcacttt
     2581 tacatcactt atacatcact tttacatcac ttatacatca cttttacatc attccttcag
     2641 ctcatacgtc actttcatcc tctgtgccat ttgtacatca cccccttcct gaacgtgctg
     2701 acagcgggtt ttccggctgc gccggcaacg cttcacggcc acgcaataaa ttgcgtcccc
     2761 gttcaccgtt ttcggatggg aagaacgccg gaaacaggac ttaccccggc tgaatggtgt
     2821 gaatttccgc gctatgcact tgtgcgcata ctcatgcatg ccgtaaaaac agagcctgcg
     2881 cgtttctggc gggttttcgg gtggtttgtt gcctgtttta ccggtttccc gtcagaaacg
     2941 ccctgagggc ctctcaggcg gtgctgataa cagatgttat ggtaaatcag agtcacctgc
     3001 actgttactc tgaaccggag cgaaacagcc gcgaccagaa tccccgcttt ttttcctgtg
     3061 ccagcgcgtc agccagacgg ctaatttcgg cctgtagttg ttccctctcc tcatttcgca
     3121 ggcggttttc tgcttcccgc gccatcttgt cttcaagcat tagggtaaca gtctgctgca
     3181 gagcgtccag tttctgctga atgacgtcta gctgagcatt ttccgcctgg ctaacgacag
     3241 atttggagtg tccctccttg tgcctttttg gtgtctcaga agtgcgcagc tcgccatagg
     3301 cccgaatcag ttcactggtc tcgaactccc ggcgatcatt ttttcctgtg cgatagctga
     3361 caaggccttt agccatgtca cgatataatt gcgagcgcga ctttcctgtt aatttcagtg
     3421 tctcttgaac tgtgtgccat gccataaaag tgacagtgtc tcctgtgtgt accgtattgt
     3481 aacagcagaa catattactg ttttaacaca aaaggtctga ggctgcccgt gaggcgtgaa
     3541 aaatacacaa aaaacctgtt gacggtgtgg ttttgacggg cgtagtattt cgaatactgt
     3601 atataaacac attgttataa atacagtttt tgctgttttt aaaagtcaaa gaggataatt
     3661 ttatgagtac agagttaaat agcggtactg tcggtggttt tggtcacatg ggaccaaatg
     3721 acccctacaa tgatggtcat agcggctctg gaagttcggg aggtagtttt aacggtggtg
     3781 gtaatggtgg ccatgataat agtagtggtt catcttatac tgcatccttt ggtctcatca
     3841 ctggccgaca cccgataact gtcccaggta cgaagaatat taattctgtc gatctttctg
     3901 ctgtcattaa taacattata catcatgaag gtgcacgcaa taacatgtac ctagatactg
     3961 cgaacaatgt aagagtggga gtgacgggca ctggctggca atgtctagca acggcaggca
     4021 tttcggctga gggtaaaaga actttccgct aagcgataga ctgtatgtaa acacagtatt
     4081 gcaaggacgc ggaacatgcc tcatgtggcg gccaggacgg ccagccggga tcgggatact
     4141 ggtcgttacc agagccaccg acccgagcaa acccttctct atcagatcgt tgacgagtat
     4201 tacccggcat tcgctgcgct tatggcagag cagggaaagg aattgccggg ctatgtgcaa
     4261 cgggaatttg aagaatttct ccaatgcggg cggctggagc atggctttct acgggttcgc
     4321 tgcgagtctt gccacgccga gcacctggtc gctttcagct gtaagcgtcg cggtttctgc
     4381 ccgagctgtg gggcgcggcg gatggccgaa agtgccgcct tgctggttga tgaagtactg
     4441 cctgaacaac ccatgcgtca gtgggtgttg agcttcccgt ttcagctgcg tttcctgttt
     4501 ggggtcgttt gcgggaaggg gcggaatcct acgctaaggc tttggccagc gatattctcc
     4561 ggtgagattg atgtgttccc aggggatagg agaagtcgct tgatatctag tatgacgtct
     4621 gtcgcacctg cttgatcgcg gccgcgatag ctagatcgcg ttgctcctct tctccatccg
     4681 cgttccaagc tgcggaaagg cacccataag cgtacgcctg gtcgagcagg cgacgcggat
     4741 cgacgtccag cgcacgagag aatgcgtccg ccatctgtgc aatgcgtcta ggatcgagac
     4801 aaaggtcgtc tctgtcagcc ggatcgtaga acatattggc ggcgccaaag cccacttcac
     4861 cgaccagacc gacgggatct atcaccagcc agccgcgact ggagaacatg atgttttcat
     4921 gatgcagatc gccatgtagc ccacgcagtt ccgaggcatt gctcatcatt tgatcggcta
     4981 taatcgccgc gtggacgtag tcagtttgac aacctgcgtt ttgatcatcg cgcgcccgct
     5041 gaaacaaagc tgcaaagcga tcccggatcg ggagaagggc agaaggcagg ggttcctcag
     5101 atgcggcata cagcttcgcc attagttccg ctgcaatttc ggtcgcctgg tagtcgccgt
     5161 gctcggcaac gatgtgagag agcattcgct ccccggcata ttcgagcaac atcagattgt
     5221 tctcacgacc gagcaaccgg actgctcccc tcccattgcg ccataccaga tagtcggccc
     5281 cgcgcagttc atcagcaatg tcttctatag gtttcaatcc cttgacgatt gcaggagtcc
     5341 cgtctggcaa tgaaactttc caaacgaggc tggaaaaggt gtccgcaatg agaacaggtt
     5401 gcgaaacgtg ccaatgagca ggaaaaacag gcggcatgaa catcaacccc aagtcagagg
     5461 gtccaatcgc agatagaagg caaggcgttc gcggtcgggg gcttcgatcc ccaatacatt
     5521 gaataggaca gcgaaggcgc gctctgcttc atctggcgct gcccagttct cttcggcgtt
     5581 agcaatcatg agtgccaaat cggcatagcg atctgctgtt ccgagccgcc caaggtcgat
     5641 cagacccgtg cattgaagag ttttagggtc caccatgaag ttcggcatgc agggatcacc
     5701 atggcaaaca accatatcgt cgctatcaat cgcggaaaaa ggcgtagtgc gcgaagcgaa
     5761 cgaagctttt tgccgtcgat tgcatagctt tgttaaccct ttttccaaat ttgatagcaa
     5821 tagttaatgt ttgaagtaaa gtgttgctca aaaacaactt cgaaggtatt tggaatactc
     5881 gggaagaaaa catccccctc tggctcgatg tcgatcgtcg ataagtggag cgtagaggcc
     5941 atgggtaatg tttctcggta aatttctccg ccaccagaca ctataacgtg accggtgaat
     6001 tcagctagcc tgtccatggc ctcttcgatt gactgaaata caactacatt gtcatcattt
     6061 gatgtccaac ctgagcgggt aacgaccgcg tatttcctat tggggagtgc gcccatagat
     6121 tcaaacgtct tgcgacccac cagaagccac tgattgtagg tcaatgcttt aaaaagtagc
     6181 tgctcccctt tcgcggacca gggtatgtct ggaccgcaac caatcacgcc gtttttcgct
     6241 ttcgcagcta tcaatgatac tttcaaggtt ctcatcctgg gttaacggtg cgctcttggt
     6301 cgagccgcac cggtagctct cgttcgacac gagccaaaag atcgagctgc ggcgtactct
     6361 tgtcctcgtc cggtaagaag tcgggattga cggcattgcg ggacaccaca tcaacggcgc
     6421 gtccgaacat tcgcgacagc ctgcgctcaa acggacattg atcaaccgat aggctgtgaa
     6481 cagcgccaag ttgctgcccc attgacggcc acgctttgag caaatccgct ccagacagat
     6541 cagccgccgg tactcccgga attgccgtta tcaccaagca tgcaccctcc tgttcctcct
     6601 gccagttgat gacctcgggg caagccacac ctcgaccttt gagccaaatg aggcggtcac
     6661 gctctccagc gagctcaccg cggcgggaag caggtgcgat tttcgcgaag gcatgcccgt
     6721 caccacgtcg aaaaacaaaa tcaccagatt ctccgcctct gacaggcaac cagtcagaat
     6781 gcgattcacc
//
LOCUS       DAJVUK010000193         6741 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.193, whole genome shotgun sequence.
ACCESSION   DAJVUK010000193 DAJVUK010000000
VERSION     DAJVUK010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6741
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.193"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            599..883
                     /locus_tag="OQQ57_003818"
     CDS             599..883
                     /locus_tag="OQQ57_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858243.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCS1958393.1"
                     /translation="MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMA
                     CKAAEDVILDRRVFNFNDRQYEEFIEMLDAPVADDPAIEKLLARKPQWDV"
     gene            871..1356
                     /locus_tag="OQQ57_003819"
     CDS             871..1356
                     /locus_tag="OQQ57_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1958394.1"
                     /translation="MGCVTAPEPLSSFHQVAEFVSGEAVLDDWLKQKGLKNQAIGATR
                     TFVVCRKGTQQIVGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDVSFRGKG
                     LGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFYIHHGFKPSKTQVQTLFLKLP
                     Q"
     gene            1390..2568
                     /gene="ltrA"
                     /locus_tag="OQQ57_003820"
     CDS             1390..2568
                     /gene="ltrA"
                     /locus_tag="OQQ57_003820"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HCS1958395.1"
                     /translation="MCVATREPPGCDGQTLKMFDQQRDGNLYKIWNRLCSGTWFPPPV
                     LEKRIPKSNGKERILGIPTVSDRIAQGAIKLFMEEKLDPIFHADSYGYRPGKSAHDAL
                     KQCAIRCWRYSWILEVDISAFFDHVKHDLVLKALEHHGMPKWVILYCRRWMEAPMQSC
                     ENGELITRTRGTPQGGVISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRM
                     SDATRLKNRLSERFSEVGLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKVRTLKNF
                     KGERYRKCMPGASNAAMRKITETIKKWRIHRSTAESLLDFARRYNTIVRGWIEYYGKF
                     WSRNFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLLRASNE
                     "
     gene            2651..2805
                     /locus_tag="OQQ57_003821"
                     /pseudo
     CDS             2651..2805
                     /locus_tag="OQQ57_003821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2859..3341)
                     /locus_tag="OQQ57_003822"
                     /pseudo
     CDS             complement(2859..3341)
                     /locus_tag="OQQ57_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016154415.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(3597..4577)
                     /locus_tag="OQQ57_003823"
     CDS             complement(3597..4577)
                     /locus_tag="OQQ57_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HCS1958396.1"
                     /translation="MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTE
                     IKVDHDKVDTQTFVVEEVNGREQTALTPDSLKDITRTIRLQQFYPCIGIRTGDLIEIL
                     DGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQTSLEHNIREIGLRLVRLKEA
                     GMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLAELSERLRL
                     GDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTL
                     LWKFDSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL"
     gene            complement(4577..5776)
                     /locus_tag="OQQ57_003824"
     CDS             complement(4577..5776)
                     /locus_tag="OQQ57_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCS1958397.1"
                     /translation="MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKS
                     AVAKLPKLTRASVDGAVGEMEAQGYQFEKRPAGTATKYALTIQNIIDIYAHRGIPKYR
                     DRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLLSEDLRILLLDLDPQSSATMF
                     LNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDAFIASNWDT
                     LCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPP
                     AQVDFHSTLKYLARLPELVQIIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIF
                     GGDMLDVSMPRLDGFERSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRI
                     EFIRANY"
     gene            complement(6098..6436)
                     /locus_tag="OQQ57_003825"
                     /pseudo
     CDS             complement(6098..6436)
                     /locus_tag="OQQ57_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(6503..>6741)
                     /gene="istB"
                     /locus_tag="OQQ57_003826"
     CDS             complement(6503..>6741)
                     /gene="istB"
                     /locus_tag="OQQ57_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS21-like element IS100kyp family helper ATPase
                     IstB"
                     /protein_id="HCS1958398.1"
                     /translation="EAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAML
                     GRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE"
BASE COUNT         1818 a         1528 c         1603 g         1792 t
ORIGIN      
        1 gcggcatccg gcatataggc agcatgaacg caacacaggc tctcgtacgg aacgtgggaa
       61 cctgtcgtct cgatgctaag ggagcggcgc ggagcagagg cactgcaagc gcctgagtac
      121 cgatgcgaga cacaggggca gatggcttcg tagtagtgag gaagtgcctg taatgggcat
      181 ggagcgaagg gggtcagtcg aggcgtttga ggttaccaat cgaagctata cccggtaatg
      241 gcgcaggttg acctgcactt ggccaagtgg attgcccgca aacacaagcg agcgcgaggt
      301 agtctggtgc gtgcattcga gtggttactg cgaattcgtc acgactgccc gacgctgttt
      361 gcacactggt gcttagctta cgatacttga atggttcaac aacaagagcc gtatgacgcg
      421 agagtgtcac gtacggttcc gtgggagcgt aggggggcgg tgcccctgcg ccacccgata
      481 tcccctttga gtgcggttac gtccacagag gtaaatgccg ctgacgcggc atctgtaatc
      541 tgttactttg tgtacatcat ttgctatata ttgtcaatat gctattgttg taaagcaaat
      601 gatatacgga ggctttatga aatcaggtgt tcagctcaat ctcagagcaa gagaatcaca
      661 gcggatactc attgatgctg ctgcagaaat tcttcataag tcgcgtacag atttcattct
      721 ggaaatggcc tgtaaagctg ctgaagatgt tattctcgac cggcgggtgt ttaattttaa
      781 tgacaggcaa tatgaagagt tcattgaaat gcttgatgct ccggttgcag atgatcctgc
      841 catcgaaaaa ttgctggcaa ggaaacctca atgggatgtg taactgcacc agaaccttta
      901 tcctcatttc atcaggtcgc tgaatttgtc agcggtgaag ctgtacttga tgactggtta
      961 aagcagaagg ggctaaaaaa tcaggcaatc ggagccaccc ggacttttgt tgtatgcaga
     1021 aaaggtacgc aacaaatagt cggtttttac tcactggcca ctggtagtgt caatcataca
     1081 gaagctacag gtaaccttcg gcgcaatatg ccagacccca ttcctgtaat tatacttgca
     1141 cgcctggctg tagatgtgtc atttcgagga aaagggcttg gcgcggattt acttcatgat
     1201 gcagttcgtc gttgttacag ggttgccgaa aatatcggtg tgcgtgcaat tatggttcat
     1261 gcgcttacgg aaaacgcaaa acagttttat attcatcatg gttttaagcc atcaaaaact
     1321 caggtgcaaa cattgtttct taaactccct caatagggag taatgcactg gtctgggcat
     1381 catatctgga tgtgcgtcgc aacaagggag ccccccggat gcgacgggca gactttgaaa
     1441 atgttcgacc agcaacgtga tggcaatcta tacaagatct ggaaccggct atgttcggga
     1501 acatggtttc cgccaccagt gctggaaaaa cggatcccga agtcgaatgg caaggaacgc
     1561 attctgggga tcccaacagt atccgatcga attgctcagg gagcgataaa acttttcatg
     1621 gaagaaaagc ttgacccgat tttccatgct gattcatatg gttaccgacc aggcaaatca
     1681 gctcatgacg ctctgaaaca atgtgccatc cggtgctggc gttatagctg gatactggaa
     1741 gtggacatca gtgcgttttt cgaccatgtg aaacatgatc tggtgctcaa agctctggaa
     1801 caccacggga tgcctaaatg ggtcatcctg tactgtcgac gctggatgga agcgccaatg
     1861 cagagttgtg aaaatggaga attaataacc cgaacacgag gcactccgca gggcggggtc
     1921 attagtccgc tacttgctaa cttgttcctt cactatgcat ttgatttgtg gatggaaaga
     1981 gaatatcggg gggtaccgtt tgagaggtac gctgacgata ttgtagtaca ttgttcacga
     2041 atgagtgatg caacaaggct aaagaacagg ttatcggagc gcttctcgga agtcgggctg
     2101 gtcctgaatg cagggaaaac gaatatcgcc tacattgaca cgtttaaaag gagaaacgtc
     2161 gcaacgagtt tcacctttct cggatatgac ttcaaagtgc gtacgctgaa gaatttcaaa
     2221 ggcgaacggt accgaaaatg catgccgggt gcgtcaaatg cagcaatgcg caaaataaca
     2281 gaaacaatca agaagtggcg tatacatcgc tcaacagctg agagtttgct ggattttgcg
     2341 aggcgctaca atacgatagt gagaggctgg atcgagtact acggaaagtt ctggtccaga
     2401 aatttcaact atcgactgtg gagtgcaatg cagtcacgtc tgctcaagtg gatgcagtct
     2461 aaatacagac tttcgaaccg gaaggctcag cgaaagctga cgctggtaag gaaggagtat
     2521 ccgaagctat ttgttcactg gtatttacta cgtgcatcaa atgagtgatc aagagccgta
     2581 tgacgcgaga gtgtcacgta cggttccgtg agcagccggg gagtgaaatt ctctccggct
     2641 gactcgactc gcgggttccg acagcgatga cgaacatgcg gcggtgttgt actcgctgat
     2701 cggcacatgc cgtctgaaca atgtggaacc agaaaatggc tgcgttacgt cattgagcat
     2761 atccaggact ggccggcaaa ccgggtacgt gatctgttgc cctagaaagt tgatctgagc
     2821 tctcagtaaa tatcaatacg gttctgacga gccgcttact tttggcgtaa ttctgctgcg
     2881 cctttactga acacaatgcc gtattcagca agaagtccac gaatgtgatt tatcagttgt
     2941 gtcctttcca ttgaaaccaa ccgacgcata ttcaaaaaag tttggacgtc ctgttgctcc
     3001 agagttttta ttggtacggg tcgtatagtt ccatgttggc aggcctcagc tattgcctgt
     3061 gcgtcgttat aatcattttt ctggcaccgc tgataagctt taacatgttg tgccggaagc
     3121 aatattacat catggtcgag tttcctgatt tcccgggccc agtaatgaga tgccccgcca
     3181 gcctccatcg caacagtcat tttaggctgt tgcaccagcc agttaagcag ttgattgcga
     3241 gaaagtttgg tctttcctgc gggtttgcca tgagcattga tactgaaaag ataaaagttc
     3301 gttttagcca gatcaatgcc ggtgattttc tgttcagaca tggtatcccg cttacttttg
     3361 tggttaaagt ttatccatca tggcgcaatt gaaggctgcc gtgaaagagg gggaagacta
     3421 tctcatcggt tactgttaaa cggctaagag aaactatctt tttcaagcaa agaagatacg
     3481 gtgaaacagg cgatttcacc gtgaaatact gttcaaaaaa aacgccaata aaagcaaaat
     3541 ttcttttaaa acagccaatt aaaaactggt gagttgctgg cgaaaaactt gaattttcac
     3601 agcgaattca gattatcttt tagtacaaga gcaatcatac gatctaactt atcctgaact
     3661 tccaacggta atctgccgaa ttcatatgag aacgtacgtc cctttactcg ttttcgagca
     3721 aatttatctt tactatcaaa tttccataac aaagttacaa ccgctttatc ctttactcct
     3781 gaatcaagca atgaagacat ttccttggtt ataagccgca taatactgtt tttaacctcg
     3841 tcttcagaaa gattgtcatc agcagtaata agctcaatac tcggcgagat attcttcaca
     3901 acttcatcaa tagatatatc acccagcctc agtcgttcac ttaattcagc cagttgcctg
     3961 taatcggcgt atgtcagctc agactgaaca ggaaaaagag acacaaaatc tttaggtacg
     4021 gacgctgctt ggagggcacg agtcacctta gctgccgaca atccctctct ttccgcaatt
     4081 tgcttctggt tcataccggc ctctttgaga cgtactaaac gcaacccaat ttcacgaata
     4141 ttatgttcaa gtgacgtctg caaatctttc gccagatgct gagcttcaga aacagtaagc
     4201 tcatcatccg ttacaagtac acgtaatcca accttgcata gcaaagctgc tgcccgacga
     4261 cgggaaccat ccaaaatctc aataagatcg ccagtccgaa tcccaataca tggatagaat
     4321 tgttgtaaac gtatagttct ggtgatgtct tttagtgagt ccggcgtcag ggctgtctgt
     4381 tcgcggccat tcacctcttc aaccacaaaa gtttgagtgt ccactttgtc atgatcaacc
     4441 ttgatctcag taaattttgc ctttcggcca gtattgaggg taaatacatg aactggagcc
     4501 gatatttctt cagtattatt caggatattt gtattcagcg tacggccaat agtcggtcgg
     4561 tgctttctgt tttccatcag tagttggccc ttataaattc aatacgatca aaaactgctt
     4621 tagcgaaatc ttctgctgcc atacgtgcat ttttcaaagc ttcaccactg ccaacataag
     4681 taacaggatt cgcagatatc acggtatcaa acgactcgcc gcttctctca aaaccatcaa
     4741 gacgtggcat tgaaacatca agcatgtcac caccgaaaat ctcttttgtc aggctatggc
     4801 agtatttatg atctgactta ttcgccagtt tcgacatgaa gccaatattt gcctgcaaac
     4861 ggcatgaaca tccatcctgt tcaataatct gtacaagttc aggtaaacga gccaaatatt
     4921 taagcgtgga atggaaatca acttgtgctg gcggcaccgg tgtaaacatg atatctgcgg
     4981 cagcaatggc atttttcaaa aatgcgtcca gatgcgggcc tgtatcaata aggatgaagt
     5041 cgaaatcatg cttcagctta tcaataatat tctcacgcaa tatcgcgtgt ttgttttgtc
     5101 ctaatagatg ctcctcgcac agagtatccc agtttgatgc aataaaggcg tcgtcaatag
     5161 aagccggcat aacataaacg ccagggataa ctgacggaac gataaaatct tccagtaatt
     5221 cctcacgact cacgttctgc aacatagcct gcggtgcggt tgtatcaacc agccccaccg
     5281 catgcaagta gttcagaaac atagtggctg atgactgggg atctaaatca aggagcagaa
     5341 tacgtaaatc ttctgacagc aggtgaggat gagcacgcag ggcgtgagct acggaaacac
     5401 tactcacggt tttagacaca ccgcctttta gactaccgat gaatatggaa tatgcctcac
     5461 tataacgatc gcgatattta ggaatgccac gatgtgcata gatatcgata atgttctgga
     5521 tggttaatgc atattttgtc gcggttcctg ctgggcgttt ttcaaactga tagccctgag
     5581 cctccatctc accgactgca ccatccacgc ttgcgcgcgt taattttgga agcttagcta
     5641 cagcagactt tgaatagact tgataaaaaa catcagcctg aaactcctgc ttttgctcct
     5701 gaatctgttt tgttagggcg agcaacattt tatctgcacg ctgcgcaacc ttacttaact
     5761 gctcaaaact agtcattccc cctccgtgct atgtaggatt ttaacttatt acaaaaaaaa
     5821 ctgcattagc agggtaatgc atgcaagtgc atattgtaca tgcttatatt aaaaatgcgc
     5881 gcattgctga tttattaatc atcggaatga atattactgt aagatagtat gcctttccgg
     5941 gagaaagacg ctgatttccc ccgaataatc cagttcacca ccacactccg gacaacagct
     6001 ttcttcaggc tccagatggt gtatttcgcg ggaaacatgt tccggtaacg gacggcgatg
     6061 acgtgactgt cgcaacaggc gggggtagtg cttccaatca gtagaacatg tgcttttcaa
     6121 tgaaggagcc gatgactttt tcgtggattt ccacggaacg cgagaagcag attgttttac
     6181 gtgccagccg cttgatgcgg gtgcggaggg tccggttgtt acgttcaata cgttgcgtga
     6241 agattttgcc ggtcaggtgt ttctccttcg gcacttctct ggcgtagctg ccccagtcat
     6301 cgctggtcac catgccgata cagaacggag tcaacagggc taacagttcc cgacaggtct
     6361 catcattccg tggcccgaaa gtgtaagcca acacaccgcc agttttagtg ttgtacgcat
     6421 accagagcca gtgttgtgtc aacgacggat gaaaagtgat ccacttatat ctccaccaac
     6481 ggcccaatat tgatccaccg ttttactcag gattagcttc tgctataacc ccggcctttc
     6541 gtttctgtct gagtcgatag ctttctcctt tgatttgaac gacatgtgag tggtgtaaga
     6601 tacggcccag catcgctgag gtcagtgctg catcaccggc gaacgtttga tcccactgcc
     6661 cgaacggtag attggatgtc aggatcattg cgctcttttc ataacgttta gcgatgacct
     6721 ggaagaacag ttttgcttct t
//
LOCUS       DAJVUK010000194         6379 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.194, whole genome shotgun sequence.
ACCESSION   DAJVUK010000194 DAJVUK010000000
VERSION     DAJVUK010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6379
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.194"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..205)
                     /locus_tag="OQQ57_003827"
     CDS             complement(<1..205)
                     /locus_tag="OQQ57_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311770.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HCS1958399.1"
                     /translation="MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAAL
                     KALRAENISTKVFNSGLGISVFRD"
     gene            684..2162
                     /locus_tag="OQQ57_003828"
     CDS             684..2162
                     /locus_tag="OQQ57_003828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HCS1958400.1"
                     /translation="MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAG
                     TGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTP
                     VILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISK
                     IFATMIDNMDQGVLVVDDESRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTH
                     GHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGEC
                     RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPE
                     QLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAR
                     EILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
                     IEHWCITFYICIPVVWDRFILALLPMSSKYCVSIVGPETCAS"
     gene            2045..2461
                     /locus_tag="OQQ57_003829"
     CDS             2045..2461
                     /locus_tag="OQQ57_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004993937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial regulatory, Fis family protein"
                     /protein_id="HCS1958401.1"
                     /translation="MHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLME
                     YLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMI
                     REALSRHNSKKQVADELGIGIATLYRKIKKYELLNT"
     gene            complement(2501..2980)
                     /gene="xdhC"
                     /locus_tag="OQQ57_003830"
     CDS             complement(2501..2980)
                     /gene="xdhC"
                     /locus_tag="OQQ57_003830"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase iron sulfur-binding
                     subunit XdhC"
                     /protein_id="HCS1958402.1"
                     /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
                     CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQ
                     CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK"
     gene            complement(2977..3855)
                     /gene="xdhB"
                     /locus_tag="OQQ57_003831"
     CDS             complement(2977..3855)
                     /gene="xdhB"
                     /locus_tag="OQQ57_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase FAD-binding subunit XdhB"
                     /protein_id="HCS1958403.1"
                     /translation="MFDFASYHRAATLADAINLLANNPQAKLLAGGTDVLIQLHHHND
                     RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAAMSIAG
                     LQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
                     EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
                     VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQMMT
                     KKVISEAVAAAGGKLQ"
     gene            complement(3866..6163)
                     /gene="xdhA"
                     /locus_tag="OQQ57_003832"
     CDS             complement(3866..6163)
                     /gene="xdhA"
                     /locus_tag="OQQ57_003832"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdenum-binding
                     subunit XdhA"
                     /protein_id="HCS1958404.1"
                     /translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
                     SPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
                     TRHVRHHGDAIAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGN
                     LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
                     QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
                     SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGN
                     KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
                     RLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVA
                     CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
                     DVRVISTQDTDVTPFDPGTFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
                     TLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
                     LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
                     VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
                     TGVAINTLPLTPKRLYEEFHLAGLI"
BASE COUNT         1592 a         1509 c         1611 g         1667 t
ORIGIN      
        1 tgtcgcggaa tacggaaata cctaatccac tattaaagac tttggttgag atgttttcag
       61 cacgcagtgc ttttaatgct gcggcaacgt ccagtacttg tttcagttca tctggcgtct
      121 gttcccacgt taacaaaaaa tctttctcgt gaaggtgaga ggtcagcgaa ttgatatcct
      181 taatcagctc attaacagtt ttcatcataa agtcccggta gtggaatgac aggcaaagtg
      241 gtttatttca ctgtgacttg ccaaagtgat tggtgttttc acagctatac ctgggactaa
      301 caataagtgt gccagaatta tccgcgcggc tgcaaaagac taatttgacg gataatgtgt
      361 ggggttgatc acaaactgat gccagcttct ggttgtttgt aaaatacgaa aacgtttggc
      421 tttttttatc gcgttattta tttgctgcta agtatcagaa ataagataaa ggggcaggct
      481 atctctcttc agtttgataa actcaccgcc gtaattctca tattgatata gaaatgtgat
      541 atctcttcca taatttcatt agaaaatgat aaaaatctta tgtttttatc aaagccaatt
      601 tcgcctgagt taatatcatc atgatctgtg aaccatcaac gtcttcaatg atcgactttt
      661 aagtaagtct ggaaggtaaa gctatggagc ttgctactac gcagtcagta ttgatgcaaa
      721 ttcaaccgac aattcagcgt tttgccagaa tgcttgccag cgttttgcag cttgaggttg
      781 agatcgttga tgaaaacttg tgtcgcgtcg ccggaacggg cgcgtatggg aagtttcttg
      841 gtcgccagtt gagcggcaac tcacgcctgc tccgccacgt cctggaaacg aaaactgaaa
      901 aagttgtgac acagtctcgc ttcgatcccc tttgcgaagg ttgcgatagt aaagaaaatt
      961 gccgtgaaaa agcatttctg ggtacgcctg tcattttaca ggatcgttgt gttggggtga
     1021 taagtttgat tgccgttacc cacgagcaac aagagcatat cagtgataat ttacgcgaat
     1081 tttctgatta tgttcgccat atatccacca tttttgtttc gaaacttctg gaggatcagg
     1141 ggccaggaga taacatcagt aaaatattcg cgaccatgat cgataatatg gatcagggcg
     1201 tattagttgt tgatgatgaa agtcgggttc agtttgttaa tcagactgcc ttaaaaacac
     1261 ttggtgttgt acaaaataat attattggga aacctatccg tttcagacca ttaacatttg
     1321 agagtaattt tactcatgga catatgcagc atattgtttc gtgggacgat aaaagtgaat
     1381 taatcattgg tcaattgcat aacattcagg gccgacaatt atttttaatg gcatttcacc
     1441 aatcgcatac cagtttttct gtagcaaatg cacctgatga accacatatt gaacaattgg
     1501 ttggcgagtg ccgtgttatg cggcaattaa aacgactcat tagccgtatt gcacccagcc
     1561 catccagcgt tatggtggtt ggtgaaagcg gcacgggtaa agaagtcgtc gcccgagcaa
     1621 tccataagtt gagcggaaga cggaataaac cctttattgc tatcaactgt gccgcgattc
     1681 cggagcagct tctggaaagc gaactgttcg gttatgttaa aggcgcattt actggcgctt
     1741 ctgccaacgg taaaacaggg ttgattcagg cggcgaatac gggcacgctg tttctcgatg
     1801 aaataggtga tatgccatta atgttgcagg ctaaattact gcgcgctatt gaggcgcgtg
     1861 aaattctgcc gattggtgcc agtagcccaa tacaagtcga cattcgcatc atttctgcaa
     1921 ctaatcagaa tttggcccag ttcattgccg aaggtaaatt ccgcgaagat ctcttctacc
     1981 gacttaatgt tatcccgata actctgccac cgctgcgtga acgtcaggaa gatattgaac
     2041 attggtgcat tactttttac atctgcatac ccgtcgtctg ggatcggttt atcctggcat
     2101 tgctcccgat gtcgtcgaaa tattgcgtaa gcatcgttgg cccggaaacc tgcgcgagtt
     2161 aagcaatttg atggaatatc tggttaacgt agttccttca ggtgaagtta tcgacagcac
     2221 gctattgccg ccaaatctgc tgaataatgg cacaacggag caaagtgatg taacagaggt
     2281 cagtgaggcg cacctgtcac tcgatgatgc gggcggcacg gcgctggagg agatggaaaa
     2341 gcaaatgatc cgcgaggcgc tttcacgtca taacagcaag aagcaagttg ctgatgaact
     2401 gggcatcggc attgctacgc tctatcgcaa gattaagaaa tatgagttgt taaacacata
     2461 acctcagtga atccggcctg aattcaggcc ggatatcctt ttacttcgtt ttctcgcaat
     2521 ccagaactgt atttacaatc atctgatacc ccgtgcagcg acaaagattt cccgccagtc
     2581 cgcgacgaat ttccgtaatg gttaatggct tctcgcgtgg tttcgccagc attgccgtgg
     2641 tagccataat caggccaggc gtacaaaacc cgcactgcac tgcgccggat ttcgcataag
     2701 cctgctgaac atgagaaagt tttccgcctt tcgcttcacc ttccagcgtg cggatctctt
     2761 ttccttcagc ccaggcggca aggtataagc aactgtctat tgctgtgccg tcgaccaaca
     2821 ccgtacaggc accacattca cccacgcagc acccttgttt gacacttagc agtccttgtt
     2881 cgcggagtaa ttccgagagc ggcgtgcctg gtgcggcgtg aagctgaaaa ggcatcccgt
     2941 taatggtgca ttcgatggta attgtttcgc tgtgattcat tgcaattttc cccccgccgc
     3001 ggcgacggct tcgctaatca cttttttggt catcatctgg atgagatgca gacgaaactc
     3061 tttactggcc cgccatgaag aacgcggggc gacatcttgc aggacagatt cgctgatagc
     3121 ttccagcgtt tgcaggttta atggcgcatt ttgtgcagtc tgttcggcat gttggcagcg
     3181 aatcggcgtt ggcgcggcaa caccaaatgc caggcgtaat tcgctgaaat tgccgttatc
     3241 cagtcggcaa tgtgcggcgc agccaatcgt tgaaatatcc attgcgtcgc gcatggcata
     3301 tttaaaatgc gcgctgcccg cgtgttcttt cggctgtggc ggaaaatgaa aggcgacgag
     3361 gatttcgtca tgctcaagag acactttgcc cggcccggtg tgaaagccat taatcgggac
     3421 gaaacgaaca ccgcgcgggg agtggatctc cagtttcgcg tcataaatta gcgttggcgt
     3481 ggcagaatct gcgctggtgg caccgttgca aatatttcca ccgtaggtag cgacgttacg
     3541 gatctgcagt ccagcaatgg acatggccgc agcacataac gccgggagat gacgttgagt
     3601 tataggatct tctattagct gggtaaatgt cgttgcagag ccgatacgta gcgagccatc
     3661 ttccgccagc gtaattcccc gcagctccgc cagattatga atatcaacaa tatggcgata
     3721 acggtcattg tgatggtgga gctgaatcag tacgtcagtg ccaccggcga gcagtttggc
     3781 ctgcgggttg ttagccagca ggttgatggc atcggcaagg gttgctgcgc gatggtaaga
     3841 agcaaaatca aacatgatgt tatcctcaaa tcaatcctgc cagatggaac tcttcatata
     3901 accgttttgg cgtcagcggc agtgtattga ttgcaacacc ggtagccatc ttcaccgcgt
     3961 tacgaatagc agcggcaaca ggaattattg gtggctcacc cagtgactta tgtccgtatg
     4021 cggattgcgg ctcattgatt tcgacgaacg cgctttccag ttgtggcaga tccggcatgg
     4081 tcggcatttt gtaatccagc agattggggt tacggaccac gccgctttta gcatcgatga
     4141 tcatctcttc aaatagcgcc cagccaatgc ccattcccat tccgccgtgt acctgacctt
     4201 ctgccagcag tggattaaga atatgccctg aatcatgaac gttgaggatg cggttgatgg
     4261 tgactttgca cagcgcaata tcgaccgtca gatcaacaaa ggtacagcca aacgccggtg
     4321 ggttagtggt ggttttgatg gagctttcag cagagagctg cccgccgcgt tcagggtggt
     4381 agaaagcgtc catcgccaaa tcttttaacg acattaacgg ctcttccggt cgttcaacca
     4441 gcacgatatg gccttttatc agggtcagat tcatcgctga ctgatgtagc atgactgcgg
     4501 cgtgagcgat gattttctct tttaataata gtgccgcact gcgcagcgca ggcgcggcaa
     4561 catagctctg gcgtgaggca aatgtgccgg gatcgaacgg cgtaacgtcg gtatcttgag
     4621 ttgaaataac gcgaacgtcg ctgaccggaa cccccacggt ttctgccacc atttgcgaga
     4681 agacggtgtc ggcaccctga ccgatttccg tcgcgccgct ttgcacgttg atggttccat
     4741 cctgattcat cagaaggcgc gcgcctgcta tttctacgcc gacaggccag gtgttagagg
     4801 tgtagctaaa acaggcgacg ccaacgccgc ggcgcaaatt gccttgctgg ttctggcatt
     4861 ctgcacggcg tttttcccat tcaaagattt tccggccttt ttcaagacac tccggcaacc
     4921 ctgcgctgta aatacgtttg cccgtgagcg gattagcatc tccttcgcgg gcggcgttgc
     4981 gtaaacgaat ttcaacagga tcaataccta acgctgtcgc ggcgtcatca agcatagact
     5041 caacggcaaa tacgacttgt ggcgcgccat aaccacgcat cgcaccagcc gaggggaggt
     5101 tggtatagca ggtctttgaa ctgtaagcgt aggcacaacg aggataaagg taagcgactt
     5161 tattcccccc cgcagaagcg atggagtgcc cgtgagatgc ataagcgccg gtgttagaca
     5221 gaacatccag actataacct ttcaatgttc cgtcgcggtt cacgcccatt tgcccgtcaa
     5281 tggtaaaagc gtggcgggta cgggttgcga ggaaacactc ttcacggcta agggaaactt
     5341 tcaccggaat gccgccaagc ttgctggtca ggaatgccgc cattggctct tccagtacat
     5401 cctgtttatt accaaaaccg ccaccgacaa atggtttgat gactcgtacg catgaccagg
     5461 gaatatccag cgcctgacca accacgcggc gaacaatgtg cgggatctgg gtgctggaaa
     5521 cgatggtaat tcgcgagtca tcctccatcc acgccagcga tgttacgctt tccatgtgac
     5581 aatgttgaat aacgggggtc tgatagtgcc cctgtacctg gtagtcggcg gcatcgattg
     5641 tttgttggac attacccgtc gacatcgtgc tttgtttcag taaattgcca ccgttatgga
     5701 ttggtgcagc gtcttctgcc agcgccgctt ctggcgtggt gataacgggt aattcttgcc
     5761 actcaatgct gaccaattgc gccgcttttt ctgccgtgag ttcatcgcgg gccacgacga
     5821 tggcaatggc gtcaccatga tgacgaacat ggcgagttag cagtgcgcga tcggcggtat
     5881 cgcgcttgtt ttcgtcaagt gtccaggcat gcccagctgt agcgaatgga atatcaggca
     5941 catcttccca ggtaaaaatc gccagtacgc ccggcaaact tctggcttgt tcatcattaa
     6001 tacttacggc ataaccatgt gcgatagggc tacgtacata tttcgcataa cacatgcccg
     6061 ccataacata atcgtcagta tatcgtgccc gcccggtgac cttagcaatg gcatcgacgc
     6121 gcatgcatga ttcacccgta gcggttgctt cccgcgcttc catagaaatc ccctcgattt
     6181 gaacatttgg ttcttatggc aaagatttag tctaagcagg caagatttac gccagaaacg
     6241 acgataagcg ttaggggagg taggaagtgt gatgacgtta aaaaaacaca gatatgatac
     6301 gaaacaggag tctgaatagg ggcagtgata cgtatcaata tgagtggcga taaaatcaat
     6361 gtgataaatt gggattatt
//
LOCUS       DAJVUK010000195         6337 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.195, whole genome shotgun sequence.
ACCESSION   DAJVUK010000195 DAJVUK010000000
VERSION     DAJVUK010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6337
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.195"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            30..152
                     /locus_tag="OQQ57_003833"
     CDS             30..152
                     /locus_tag="OQQ57_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001124879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HCS1958405.1"
                     /translation="MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDT"
     gene            168..1013
                     /locus_tag="OQQ57_003834"
     CDS             168..1013
                     /locus_tag="OQQ57_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HCS1958406.1"
                     /translation="MRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDA
                     IILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLSN
                     AAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDK
                     AISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELE
                     NNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATH
                     VDGLP"
     gene            1036..2547
                     /locus_tag="OQQ57_003835"
     CDS             1036..2547
                     /locus_tag="OQQ57_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HCS1958407.1"
                     /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
                     NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEG
                     LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
                     ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC
                     ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP
                     KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLETYEQGEIVINGEKITRPDYGDM
                     LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMT
                     VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL
                     AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHSPVNVDELMSAILSVH"
     gene            2572..3570
                     /locus_tag="OQQ57_003836"
     CDS             2572..3570
                     /locus_tag="OQQ57_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1958408.1"
                     /translation="MSASSLSLPLGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
                     PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
                     PLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID
                     ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN
                     VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
                     SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
     gene            3603..4697
                     /locus_tag="OQQ57_003837"
     CDS             3603..4697
                     /locus_tag="OQQ57_003837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HCS1958409.1"
                     /translation="MKINRIVNEGFMKTMLAAYLPGNSTVDLREVAVPTPGINQVLIK
                     MKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
                     VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
                     YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
                     LPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALRSTA
                     DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
                     THRFSLEQAGDAYALMASGKCGKVVINFPD"
     gene            4709..5581
                     /locus_tag="OQQ57_003838"
     CDS             4709..5581
                     /locus_tag="OQQ57_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HCS1958410.1"
                     /translation="MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD
                     ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC
                     LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
                     AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
                     YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG
                     ESTTSEMSLRVEWL"
     gene            complement(5629..6051)
                     /locus_tag="OQQ57_003839"
     CDS             complement(5629..6051)
                     /locus_tag="OQQ57_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCS1958411.1"
                     /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQ
                     YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM
                     TGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR"
     gene            complement(6148..>6337)
                     /locus_tag="OQQ57_003840"
     CDS             complement(6148..>6337)
                     /locus_tag="OQQ57_003840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenoxybenzoate dioxygenase"
                     /protein_id="HCS1958412.1"
                     /translation="WLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSG
                     KTFDAKLLIDENIALKSL"
BASE COUNT         1467 a         1515 c         1835 g         1520 t
ORIGIN      
        1 ttgttaataa aaaccctaca ggaggcacta tgcctaaaaa aatgagaaca acccgtaatc
       61 tattattaat ggctacgcta ttaggtagcg cactatttgc cagggctgcg gataaagaaa
      121 tgaccattgg tgcaatatac cttgatacct agggatatta cgctggagtg cgtcagggcg
      181 ttcaggatgc ggcaaaagat tcttcagtac aggtacagtt aattgaaact aacgcccagg
      241 gtgatatttc gaaagaaagt acctttgttg ataccctcgt ggcgcgtaat gtcgatgcca
      301 ttattttatc ggcagtgtct gaaaatggca gtagccgtac cgttcgtcgc gccagtgaag
      361 cgggtattcc ggtgatttgc tacaacacct gtattaatca aaagggtgtc gataaatatg
      421 tctcggcgta tctggtcggc gatccactgg aatttggtaa aaaactgagt aacgctgccg
      481 ccgattattt tattgccaat aaaattgacc agccgaaaat tgccgtcatc aattgcgaag
      541 cctttgaagt ttgtgtgcag cgacgtaaag gatttgaaga agtattaaaa tcccgcgttc
      601 ccggcgcgca aattgtcgct aatcaggaag ggactgtttt agataaagcg atttccgttg
      661 gtgaaaaact gattatctcc acgccggatc tcaacgccat tatgggggag tcgggcggtg
      721 cgacactcgg cgcggtaaaa gcggtacgta atcaaaatca ggccggaaaa attgctgttt
      781 tcggttcgga tatgacaacc gaaattgctc aggagctgga aaacaatcag gtgctgaaag
      841 cggtagtgga tatttccggt aagaaaatgg gcaatgctgt tttcgcgcaa acattgaagg
      901 ttatcaataa acaagccgac ggtgaaaaag tgattcaggt gccaatcgat ctctatacca
      961 aaacggaaga tggtaaacag tggctggcaa cgcacgttga tggtctgccc taatcgctga
     1021 ttcgcagagg tccctatgtt cacggcaaca gaggcagtcc cggtagcaaa agtggtggca
     1081 ggaaataagc gttaccccgg cgtcgttgcg ctggataacg ttaacttcac gctcaataaa
     1141 ggcgaagttc gtgcgctgtt aggtaaaaac ggcgcgggca aatcgactct cattcgaatg
     1201 cttaccggca gcgaacgccc ggatagcggt gatatctgga ttggcgagac gcgactggaa
     1261 ggtgacgaag ctacgttgac tcgccgtgcc gctgaactgg gggttcgtgc ggtttatcag
     1321 gaattaagtc tggtggaagg gctgacggtg gcagaaaacc tctgccttgg tcaatggcct
     1381 cgccgcaacg gcatgattga ttacctgcaa atggcgcagg atgcccaacg ttgcttacag
     1441 gcgctgggcg ttgacgttag tcctgaacaa cttgtttcaa cgctaagccc ggcgcaaaag
     1501 caactggtgg aaattgcacg ggtgatgaag ggcgagccgc gcgtggtcat tcttgatgaa
     1561 cccaccagct cgcttgccag tgcagaagtt gaactggtga tcagtgcggt gaaaaagatg
     1621 tcggcactgg gcgtggcggt gatttatgtc agccaccgga tggaagaaat ccgccgcatt
     1681 gcctcctgtg ccaccgttat gcgcgatggt caggtggcgg gcgatgtgat gctcgaaaac
     1741 acctccacgc atcatattgt gtcgctaatg ctagggcgtg atcacgttga tattgcgccg
     1801 gttgcccctc aggaaattgt ggatcaggcc gtactggaag tccgtgcgtt acgccataag
     1861 cccaagctgg aggatatcag ctttacgtta cgtcgcggcg aagtgcttgg cattgctggc
     1921 ctgctggggg cagggcgcag tgaattgctg aaggcgattg ttgggctgga gacgtatgaa
     1981 cagggcgaaa ttgttatcaa cggcgagaaa atcacgcgcc ccgattacgg cgacatgctg
     2041 aaacgcggca ttggctatac gccagaaaac cgcaaagaag cggggatcat tccctggttg
     2101 ggcgttgacg aaaatacagt gctgaccaat cggcaaaaaa tcagcgccaa cggagtgctg
     2161 caatggtcca ccatccgccg cctgaccgaa gaggtgatgc agcggatgac ggtcaaggcc
     2221 gccagtagcg aaacgcccat cggcacgctt tctggtggca atcagcaaaa agtggtgatc
     2281 ggtcgttggg tctatgccgc cagccagatt ttgttgctcg acgagccaac gcgcggcgtc
     2341 gatatcgaag ccaaacagca gatttaccgt attgtccgtg agctggctgc cgaaggaaaa
     2401 agcgtggtgt ttatctccag tgaagtggag gagttgccgc tggtgtgcga ccgcatcctg
     2461 ttgttacagc acggtacgtt ctcgcaggag tttcactcgc cggtcaatgt ggatgagctg
     2521 atgtccgcca ttctgtctgt gcactgatga attttaccga ggaacctgaa gatgtctgct
     2581 tcgtcattat cattgccgct gggcaagagc gtctcgctca aacaatttgt cagtcgccat
     2641 attaatgaga tcggtttgct ggtggtaatc gccattcttt atctggtctt ctccctgaat
     2701 gcgcctggct ttatctcatt gaataaccag atgaacgtgc ttcgcgatgc tgccaccatc
     2761 gggatcgccg cctgggcaat gacgctgatt attatctccg gtgaaattga tgtcagcgtt
     2821 ggaccgatgg tggcttttgt ctcggtgtgc ctggcatttt tgctgcaatt tgaagttccg
     2881 ttggcgattg cttgtctgct ggtgttgctg ttaggcgcgc tgatgggaac gctcgccggg
     2941 gtgctgcgcg gcgtgtttaa cgtgcccagt ttcgttgcca cactggggct gtggagcgcc
     3001 ctgcgcggaa tggggctgtt tatgaccaac gcactgccag tgccgattga cgaaaacgag
     3061 gtgctggact ggctgggcgg acaatttctc ggtgtgccag tatccgcgct gatcatgatg
     3121 gtgttgtttg cgctgtttgt gttcattagc cgaaaaaccg ccttcgggcg ctcggttttt
     3181 gccgttggcg gtaatgccac ggcggcgcag ttgtgcggta ttaacgttcg tcgagtgcgc
     3241 attcttatct ttaccctttc gggattatta gcggcggtga ccggcatttt gctggcggca
     3301 cgcctcggtt ccggtaacgc aggtgccgca aacggtctgg agtttgacgt catcgccgcg
     3361 gtcgtggtcg gcggtacggc actttccggc ggtcgcggtt ccctgttcgg tacattgctt
     3421 ggtgtgctgg tgattacgct aatcggtaac ggtctggtgc tgctcggtat taactccttt
     3481 ttccagcagg tggtacgcgg cgtcatcatc gtggtggcgg tgctggcgaa tatcttgctg
     3541 acccagcgaa gcagtaaagc gaaacgctaa accttaacgc ccctggcgcg ggtgcggcag
     3601 ggatgaaaat taatcgtatt gttaatgagg gatttatgaa aacgatgctg gcagcttatt
     3661 taccaggaaa ttcaaccgtc gatctgcggg aagttgcggt gccgacgccg gggattaacc
     3721 aggtactgat caaaatgaaa tcctccggga tttgcggaag cgatgtccac tatatctatc
     3781 atcaacaccg tgccacggcg gcggcacccg ataaaccgtt ataccaggga tttatcaacg
     3841 gtcatgaacc atgcgggcag attgtggcga tggggcaagg ctgtcgccat tttaaagagg
     3901 gtgatcgcgt gctggtgtat cacatttctg gctgtggttt ttgcccgaac tgccgccgcg
     3961 gctttcctat ctcttgtact ggcaaaggaa aagcggctta cggctggcag cgtgacggcg
     4021 gtcatgccga atacttgctg gcggaagaaa aagatctgat cctcctgccg gatgcgctta
     4081 gctacgaaga tggtgcgttt atcagttgcg gcgttggtac agcgtatgaa ggaattttgc
     4141 gcggcgaagt ttccggcagt gataacgtgc tggtggtcgg tctggggcca gtcggcatga
     4201 tggcgatgat gctggcgaaa ggtcgcggtg caaaacggat catcggcgtt gatatgctgc
     4261 cggaacgtct ggcgatggca aaacagttag gggtgatgga tcacggctat ttagcaacca
     4321 ccgaaggtct gccgcagatt atcgccgaac tcacccacgg tggcgcggat gttgcgctcg
     4381 attgttctgg taatgccgca ggtcgcttgc tggcactgcg atccaccgct gattggggac
     4441 gggtggttta catcggagaa accggaaaag tggagttcga ggtcagcgcc gatctgatgc
     4501 accatcaacg gcggattatc ggctcctggg tgaccagtct gttccatatg gaaaaatgcg
     4561 cccatgatct gacggactgg aaactgtggc cgcgtaacgc cattacccat cgcttctcgc
     4621 tggaacaggc tggagatgcc tatgcgctga tggcgagcgg caaatgcggg aaagttgtga
     4681 ttaacttccc ggattaagga gttagcggat gaccatctat accttatctc acggaccgct
     4741 aaagctggat gtctctgacc agggcggcgt aatcgaaggc ttctggcgtg acacgacgcc
     4801 gcttttacgt cctggtaaaa aaagcggtgt ggcaaccgat gcttcctgtt ttccgctggt
     4861 gccgtttgca aaccgggtga gcggcaatcg ttttgtctgg caggggcgtg agtatcaact
     4921 gcaaccgaat gttgagtggg atgcgcacta tctacacggc gatggctggc tgggcgagtg
     4981 gcaatgtgtc tcgcacagcg atgatagctt gtgtctggtg tatgaacatc gcagcggtgt
     5041 ctatcactat cgggtaagtc aggcgtttca tttaacggcg gatacgctga cggtgacgct
     5101 ctctgtcacc aatcaagggg cagagacgct gccatttggt accggctggc atccttattt
     5161 tccgttgtca ccacaaacgc ggattcaggc gcaggcgagc ggttactggc tggagcggga
     5221 gcagtggctg gcgggtgagt tttgcgagca gctaccgcag gaactggatt ttaaccagct
     5281 cgcgccgttg ccgcgccagt gggtgaacaa tggttttgcc ggatggaatg gtcaggcccg
     5341 catcgagcag ccgcaggaag gttatgccat catcatggaa acgacgccac ctgcaccgtg
     5401 ttatttcatc tttgtttccg accctgcgtt tgataaagga tatgcgtttg atttcttctg
     5461 tctggaaccg atgagccatg cgccggatga tcatcatcgc ccggaagggg gtgatctcat
     5521 tgcgctagca ccaggggaat caacaacttc agagatgtcg ttgcgggtag agtggctgta
     5581 atttattaaa tgccggataa ggcgttcacg ccgcatccgg catctttcct aacgccgatc
     5641 gagagaaatt gcccccggcc cggtaattgc caatagcaag aacgcgccag cgatactgac
     5701 attcttccag aaattaatca tatttggccc aaccgcatcg ccggtcatat cccagtaatg
     5761 gtgaccaatc accgccgtac ccagcgtgta gaaaataaac agcaccgcca gcggacgggt
     5821 gaaaaagcca agcacgatta atatcgcggc gggcacttcc ataactaccg caataatcgc
     5881 tgccagcatc ggcattggcg cgcccaacga ggccatatat tggaccgtac cgtcaaagcc
     5941 catcattttg ggaaaaccca aaataatgaa aattaagacc acggcgatac gggcaattaa
     6001 taacaaaacg gggcgggcag ctccaaaatc aaaataacgt agtgtgttca taaccaatcc
     6061 ctttgcaaga taatgtgatt taaacgtaat acacactctt gcacctcgcc acgccccagg
     6121 cgttgagata ttcgctaatt atcctggtta cagtgattta agcgcgatgt tctcatctat
     6181 cagcagtttc gcatcaaacg ttttgccgct ctggatccat ttgcgaattg ggcgaatctc
     6241 acgcccctga ttcagcgtga ccgcaccgat aagcacgccg ttttgcagat taaaccaaat
     6301 cgccttctga gtttccgggt tgccacgaca aagccag
//
LOCUS       DAJVUK010000196         6327 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.196, whole genome shotgun sequence.
ACCESSION   DAJVUK010000196 DAJVUK010000000
VERSION     DAJVUK010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6327
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.196"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1192
                     /gene="tnaB"
                     /locus_tag="OQQ57_003841"
     CDS             <1..1192
                     /gene="tnaB"
                     /locus_tag="OQQ57_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
                     /protein_id="HCS1958413.1"
                     /translation="GTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLLLEA
                     NLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNLG
                     YHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSIL
                     RDATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLA
                     LVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAV
                     ASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAG
                     LCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIVILFGITVILCWFGNVFNVL
                     PKFG"
     gene            1324..2499
                     /gene="mdtL"
                     /locus_tag="OQQ57_003842"
     CDS             1324..2499
                     /gene="mdtL"
                     /locus_tag="OQQ57_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HCS1958414.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WAMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQV
                     LFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA"
     gene            2474..3433
                     /gene="yidZ"
                     /locus_tag="OQQ57_003843"
     CDS             2474..3433
                     /gene="yidZ"
                     /locus_tag="OQQ57_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HCS1958415.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWAL
                     DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            3590..4339
                     /locus_tag="OQQ57_003844"
     CDS             3590..4339
                     /locus_tag="OQQ57_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709485.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HCS1958416.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPAIEKLSVWELDGKHSWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKSFSPN"
     gene            4361..4927
                     /gene="yieF"
                     /locus_tag="OQQ57_003845"
                     /gene_synonym="chrR"
     CDS             4361..4927
                     /gene="yieF"
                     /locus_tag="OQQ57_003845"
                     /gene_synonym="chrR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I chromate reductase YieF"
                     /protein_id="HCS1958417.1"
                     /translation="MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDRQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(4981..6318)
                     /gene="adeP"
                     /locus_tag="OQQ57_003846"
     CDS             complement(4981..6318)
                     /gene="adeP"
                     /locus_tag="OQQ57_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeP"
                     /protein_id="HCS1958418.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
BASE COUNT         1487 a         1632 c         1592 g         1616 t
ORIGIN      
        1 aggtacagta attggtggag gtatgtttgc tttacctgtt gatcttgccg gtgcctggtt
       61 tttctggggt gcctttatcc ttatcattgc ctggttttca atgcttcatt ccgggttatt
      121 gttattagaa gcaaatttaa attatcctgt cggctccagt tttaacacca tcaccaaaga
      181 tttaatcggt aacacctgga acattatcag cggtattacc gttgccttcg ttctctatat
      241 cctcacttat gcctatatct ctgctaatgg tgcgatcatt agtgaaacga tatcaatgaa
      301 tttgggctat cacgctaatc cacgtattgt cgggatctgc acagccattt tcgttgccag
      361 cgtattgtgg ataagttcgt tagccgccag tcgcattacc tcattgttcc tcgggctgaa
      421 gattatctcc tttgtgatcg tgtttggttc tttcttcttc caggtcgatt actccattct
      481 gcgcgatgcc accagcacca ctgcgggaac gtcttacttc ccgtatatct ttatggcttt
      541 gccggtgtgt ctggcgtcat ttggtttcca cggcaatatt cccagcctga ttatttgcta
      601 tggaaaacgc aaagataagt taatcaaaag cgtggtattt ggttcgctgc tggcgctggt
      661 gatttatctc ttctggctct attgcacgat ggggaatatt ccgcgcgaaa gctttaaggc
      721 gataatctcc tcaggcggca acgttgattc gctggtgaaa tcgttcctcg gcaccaaaca
      781 gcacggcatt atcgagtttt gcctgctggt gttctctaac ttagctgttg ccagttcgtt
      841 ctttggtgtc acgctggggt tgttcgatta tctggcggac ctgtttaaga ttgataactc
      901 ccacggcggg cgtttcaaaa ccgtgctgtt aaccttcctg ccacctgcgt tgttgtatct
      961 gatcttcccg aacggcttta tttacgggat cggcggtgcc gggctgtgcg ccaccatctg
     1021 ggcggtcatt attcccgcag tgcttgcaat caaagctcgc aagaagtttc ccaatcagat
     1081 gttcacggtc tggggcggca atcttattcc ggcgattgtc attctctttg gtataaccgt
     1141 gattttgtgc tggttcggca acgtctttaa cgtgttacct aaatttggct aaatccttca
     1201 agaagccagc cattcgctgg cttcttgcct ctcaggaaat cacttatgtc caaatggcaa
     1261 ctcgcctgat cctccttcac cacgtatgct ttgcgtcacc ttactatcag gacgctttag
     1321 cccatgtccc gctttttgat ttgtagtttt gccctggttt tactttatcc cgccgggatt
     1381 gatatgtacc tcgttggttt accgcgcatc gccgccgatc tcaatgccag cgaagcgcag
     1441 ttgcatattg cgttctccgt atatctggcg gggatggcag ctgcgatgtt atttgccggt
     1501 aaagtggccg atcgttcagg gagaaagccg gtcgccatac ccggcgcggc gctatttatt
     1561 attgcctcgg tgttctgttc actggctgaa accagcacgt tatttcttgc aggccgattt
     1621 ctacaggggt tgggcgcagg ctgttgttac gtagtggcgt tcgccatttt gcgcgacacg
     1681 ctggatgatc gacgtcgggc taaagtgctg tcattactca acggtattac ctgcatcatt
     1741 ccggtgttag cgccagtgct cggacatctg attatgctta aattcccgtg gcagagtctg
     1801 ttctgggcga tggcaatgat gggcatcgcg gtactgatgt tgtctttgtt tattttaaaa
     1861 gaaacgcgcc cagcgtcccc cgctgcttcg gacaaaccac gagaaaatag cgagtcgctg
     1921 cttaatcggt ttttcctcag ccgtgttgtt atcaccaccc tcagcgtttc ggtgatcctc
     1981 actttcgtca atacatcgcc ggtattgctg atggaaatca tgggttttga gcgcggagaa
     2041 tacgccacca ttatggcgtt gaccgctggc gtcagcatga ccgtttcatt ctccacgcca
     2101 tttgcgctgg gaatttttaa gccacgtacg ttgatgatca cctcgcaggt gttattcctt
     2161 gcagcgggga tcacccttgc cgtttcacct tcccatgcgg tttctctgtt tggtatcaca
     2221 ctgatttgcg ccggtttctc ggtaggtttt ggcgtagcga tgagtcaggc gttaggacca
     2281 ttttcattac gcgcgggcgt agccagctcg accttaggta ttgcgcaggt ttgcggttcg
     2341 tcactgtgga tttggctggc agcggtggtt ggtatcggcg catggaatat gctgatcggg
     2401 attctgattg cctgtagcat agtgagcctg ttgctgatta tgttcgtcgc gcctggacgc
     2461 cccgttgccg ctcatgaaga aatccatcac cacgcttgat ctcaatctgc tgctctgtct
     2521 gcaactgctg atgcaggagc gcagcgtgac caaagcggcg aagcggatga acgtgacccc
     2581 ttcagcggtg agtaagtcgc tggcaaagtt aagagcgtgg tttgacgacc cgctctttgt
     2641 gaactcaccg ctggggctgt cgcccacacc gctaatggtc agcatggagc aaaatctggc
     2701 ggaatggatg caaatgagca atctgctgct ggataaaccg caccaccaga caccgcgcgg
     2761 cctgaagttt gagttggcgg cggaatcgcc gctgatgatg atcatgctta atgcgctgtc
     2821 gaaacggatc taccaacgtt acccgcaggc gaccatcaaa ctacgtaact gggattacga
     2881 ttccttagat gccattactc gtggtgaagt ggatattggt ttttccggtc gcgaaagcca
     2941 tcctcgctcg cgggagctgt taagctcgct accgttagcc attgattatg aagtgctgtt
     3001 tagtgatgta ccctgcgtct ggttacgcaa agatcatccg gcactgcatg aaacgtggaa
     3061 tctggacacc tttttacgtt atccgcatat cagcatttgc tgggaacaga gcgacacctg
     3121 ggcgctggac aatgtgttac aggagctggg gcgcgaacgc acgattgcta tgagcctgcc
     3181 ggaatttgag cagtcactgt ttatggcagc gcaacccgac aatctgctac tggcgaccgc
     3241 gccgcgctac tgtcagtact acaatcaact ccatcaactg ccgttggttg ctcttcctct
     3301 cccgtttgac gaaagccagc aaaaaaagct ggaagttcct tttaccctgc tgtggcataa
     3361 acggaacagt cataatccga agatcgtctg gttacgggaa accattaaaa acctttacgc
     3421 gtcgatggca taaccgaatc gtatgaaacg cgacccaatt tcacaataaa atgtaaaaaa
     3481 gttgtaataa gcttgtctga atcgaacttt tagccgcttt agtctgtcca tcattccagt
     3541 aaatgattac tcttatattc ataatggacc attaagcatg gagcgaaaaa tggcgactca
     3601 ctttgcccga gggattttaa cggaaggaca tctgatttct gttcgtctcc cctcccagtg
     3661 tcatcaagaa gcccgaaaca ttccccctca tcgtcaaagc cgttttctgg cgtccagagg
     3721 tttactcgca gaactgatgt tcatgctgta tggcattggc gaattgccgg aaatcgtcac
     3781 cctgccgaaa ggtaaaccgg ttttcagtga taaaaatttg ccttcgtttt ctatttccta
     3841 tgccgggaat atggttggcg tggcgttaac aaccgaaggt gaatgtggcc tcgatatgga
     3901 actacagcgt gcgacgcgcg ggtttcatag cccacacgcg cccgataacc acaccttttc
     3961 cagcaatgaa tcgctatgga tcagtaaaca aaacgatcct aacgaagcgc gggcgcagct
     4021 catcacgctg cgccgaagcg tgctaaaact aaccggtgat gttttgaatg acgatccgcg
     4081 cgatctgcag ctgctgccca ttgccggacg cctgaaatgt gctcatgtaa atcatgtaga
     4141 agcgttatgc gacgcggagg acgtgctggt gtggtccgtg gcggtcacgc ccgcgattga
     4201 aaagctcagt gtctgggagt tagatggcaa acacagctgg aaaagcctgc cggatattca
     4261 cagccgcgcc aacaatccta ccagccggat gatgcgtttt gcccagctct ctaccgtgaa
     4321 gtctttttcg ccaaattgat agacaaccac aggagtcatt atgtctgaaa aattgcaggt
     4381 ggttacgtta ctggggagcc tgcgcaaagg ctcatttaat ggcatggttg cacgtaccct
     4441 gccgaaaatt gctccggcga gcatggaagt caatgcgtta ccttccattg ccgacattcc
     4501 cctgtatgac gctgacgtac agcaggaaga aggttttcca gcaacggttg aagctctggc
     4561 ggaacagatc cgtcaggctg acggtgtggt gatcgtcacg ccggaatata actactcggt
     4621 accgggtggg ctgaaaaatg ccatcgactg gctttcccgc ctgccggatc aaccgctggc
     4681 cggtaaaccg gtgttgattc agaccagctc aatgggcgtg attggcggcg cgcgctgtca
     4741 gtatcacctg cgccagattc tggttttcct cgatgcaatg gtgatgaaca agccggaatt
     4801 tatgggcggc gtgattcaga acaaagttga tcggcaaacc ggagaagtga ttgatcaggg
     4861 tacgctggac cacctgaccg ggcaattgac cgcatttggt gagtttattc agcgagttaa
     4921 gatctaaata aaaaacccgc cagtaatcat gcatggcggg tttttaatgc gctatcgatt
     4981 ttaatgagcg tcgataaata caatcttcag gataaacagc agcgcaacga tgattacgca
     5041 cgggctaagg tcacgcagac gcccggtacc aatcttcatc acgcagtagg agataaagcc
     5101 cagcgcaata ccttcggtaa tcgaaaagct gaacggcatc atcacggcgg taataaacgc
     5161 cggaacagat tcagtaagat cctgccagtt cacgcgagca agacttgagg tcatcaacac
     5221 gccaacgtag atcaacgcgc cagctgcagc gtagcctggc accattcccg ccagcggcga
     5281 cagaaagata accagcagga acagcagacc aacaaccact gccgtcagac cggtacgacc
     5341 gccaaccgat acgccggaag aggactcaat ataagccgta acggaagaag taccgataaa
     5401 cgaaccggtc acggaagaga tactgtcgac atacagcgct tgcttcatgc gcgggaattt
     5461 ccccttctca tccgccagac ctgctttatc ggtcacgcca atcagcgtac cggaggagtc
     5521 aaacaagttg accaacatga aagagaaaat cacccctgcc agcccgaggt taaacgaccc
     5581 ggctaaatct acatgaccca caactgtcat tacgctcggc ggcgcagaaa cgatgccatt
     5641 gtagtgcaca tcacccagca tccagcccag cagcgtcgtc accacgatag aaaccagcac
     5701 cgctgcgtga atgttgcgcg aggccagaat agcaatgatg aagaagccga ggatacccag
     5761 aagtacgctg tgagaagtca gattaccgat gctcaccagc gtttccgagt tagcgacaat
     5821 cacacctgcg tttttcagcc ccatcatgcc gataaacagg ccgataccgc tggtaatacc
     5881 cacacgcaga cttaccggaa tgttagcaat catccagtaa cgaacgcgga aaatggtcaa
     5941 aagaagcagt ccgacagcgc cccagaagat tgcgcccata ccgatctgcc acggcagccc
     6001 cattgcctgg acaaccacaa aagcgaaaaa ggcgttaagc cccatcgcag gagccagcgc
     6061 caccggaagg tttgcaaaca atcccatcat aatgctaccg aaagcagcaa tcagacaggt
     6121 tgttacgaag acggcactgg tgtccatgcc agcaacgccc agaatttgtg ggttaacaaa
     6181 aacgatgtaa accatcgtca ggaaggtggt aaaaccggcg atcacttcgg tccgtgccgt
     6241 cgtgccatgt tcgcgcagtt taaacacgcg ttccagcatc ccctggccag aagcctgggt
     6301 tgtgtgttgt tgactcatta tctattt
//
LOCUS       DAJVUK010000197         6307 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.197, whole genome shotgun sequence.
ACCESSION   DAJVUK010000197 DAJVUK010000000
VERSION     DAJVUK010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6307
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.197"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            275..616
                     /gene="raiA"
                     /locus_tag="OQQ57_003847"
     CDS             275..616
                     /gene="raiA"
                     /locus_tag="OQQ57_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HCS1958419.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     misc_feature    719..844
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            720..767
                     /gene="pheL"
                     /locus_tag="OQQ57_003848"
     CDS             720..767
                     /gene="pheL"
                     /locus_tag="OQQ57_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheA operon leader peptide PheL"
                     /protein_id="HCS1958420.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            867..2027
                     /gene="pheA"
                     /locus_tag="OQQ57_003849"
     CDS             867..2027
                     /gene="pheA"
                     /locus_tag="OQQ57_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HCS1958421.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(2070..3191)
                     /gene="tyrA"
                     /locus_tag="OQQ57_003850"
     CDS             complement(2070..3191)
                     /gene="tyrA"
                     /locus_tag="OQQ57_003850"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HCS1958422.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLKQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(3202..4272)
                     /gene="aroF"
                     /locus_tag="OQQ57_003851"
     CDS             complement(3202..4272)
                     /gene="aroF"
                     /locus_tag="OQQ57_003851"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HCS1958423.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTI
                     SDIIAGRDPRLLVVCGPCSIHDLETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            4480..4845
                     /locus_tag="OQQ57_003852"
     CDS             4480..4845
                     /locus_tag="OQQ57_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HCS1958424.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQ
                     LHEVWQKGADENASTIRLN"
     gene            4995..5513
                     /locus_tag="OQQ57_003853"
     CDS             4995..5513
                     /locus_tag="OQQ57_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HCS1958425.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAKQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            5503..>6307
                     /gene="dgcN"
                     /locus_tag="OQQ57_003854"
     CDS             5503..>6307
                     /gene="dgcN"
                     /locus_tag="OQQ57_003854"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HCS1958426.1"
                     /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN"
BASE COUNT         1713 a         1610 c         1417 g         1567 t
ORIGIN      
        1 agtcagttgc ttaactgact ggcattacag cccttgagct gccgtttttt tattctgtta
       61 gttgtgaaac tgaagcgatt tagtcactat cgatctcatc aaatatggct cgctttgaga
      121 tattcctcaa gtaaaaaaac acctcttcct gcgatttctc acaaaaaaga ttcgttgaca
      181 aaaagtgaca aaattatgag attcccatca cacattttga catcaggaac ggtatgctga
      241 attcaccaag acgggaagac aagaggtaaa atttatgaca atgaacatta ccagcaaaca
      301 aatggaaatt actccggcca tccgccaaca tgtcgcagac cgtctcgcca aactggaaaa
      361 atggcaaaca catctgatta atccacatat cattctgtcc aaagagccac aagggtttgt
      421 tgctgacgcc acaatcaata cacctaacgg cgttctggtt gccagtggta aacatgaaga
      481 tatgtacact gcaattaacg aattgatcaa caagctggaa cggcagctca ataaactgca
      541 gcacaaaggc gaagcacgtc gtgccgcaac atcggtgaaa gacgccaact tcgtcgaaga
      601 agttgaagaa gagtagtcct ttatattgag tgtatcgcca acgcgccttc gggcgcgttt
      661 tttgttgaca gcgtgaaaac agtacgggta ctgtactaaa gtcacttaag gaaacaaaca
      721 tgaaacacac accgtttttc ttcgcattct tttttacctt cccctgaatg ggaggcgttt
      781 cgtcgtgtga aacagaatgc gaagacgaac aataaggcct cccaaaccgg ggggcctttt
      841 ttattgataa caaaaaaggc aacactatga catcggaaaa tccattactg gcgctgcgag
      901 agaaaatcag cgcgctggat gaaaaattat tagcattact ggcagagcgg cgcgaactgg
      961 ccgtcgaggt gggaaaagcc aaactgctct cgcatcgccc ggtacgagat attgatcgtg
     1021 aacgcgattt actggaaaga ttaattacgc tcggtaaagc gcaccatctg gacgcccatt
     1081 acattactcg cctgttccag ctcatcattg aagattccgt attaactcag caggctttgc
     1141 tccagcaaca tctcaataaa attaatccgc actcagcacg catcgctttt ctcggcccca
     1201 aaggttctta ttcccatctt gcggcgcgcc agtatgctgc ccgtcacttt gagcaattca
     1261 ttgaaagtgg ctgcgccaaa tttgccgata tttttaatca ggtggaaacc ggccaggccg
     1321 actatgccgt cgtaccgatt gaaaatacca gctccggtgc cataaacgac gtttacgatc
     1381 tgctgcaaca taccagcttg tcgattgttg gcgagatgac gttaactatc gaccattgtt
     1441 tgttggtctc cggcacgact gatttatcca ccattaatac ggtctacagc catccgcagc
     1501 cattccagca atgcagcaaa ttccttaatc gttatcctca ctggaagatt gaatataccg
     1561 aaagtacgtc agcggcaatg gaaaaggttg cacaggcaaa atcaccgcat gttgctgcgt
     1621 tgggaagcga agctggcggc actttgtacg gtttgcaggt actggagcgt attgaagcga
     1681 atcagcaaca aaacttcacc cgatttgtgg tgttggcacg taaagccatt aacgtgtctg
     1741 accaggttcc ggcgaaaacg acgttgttaa tggcgaccgg gcaacaagcc ggtgcgctgg
     1801 ttgaagcgtt gctggtgctg cgcaaccaca atctgattat gacccgtctg gaatcacgcc
     1861 cgattcacgg taatccatgg gaagagatgt tttatctgga tattcaggcc aatcttgaat
     1921 cagcggaaat gcaaaaagca ttgaaagagt taggtgaaat tacccgttca atgaaggtat
     1981 tgggctgtta cccaagtgag aacgtagtgc ctgttgatcc aacctgatga aaaggtgccg
     2041 gatgatgtga atcatccggc actggattat tactggcggt tgtcattcgc ctgacgcaat
     2101 aacacgcggc tttcactctg aaaacgctgt gcgtaatcgc cgaaccagtg ctccaccttg
     2161 cggaaactgt caataaacgc ctgcttatcg ccctgcttca gcaactcaat cgcctcgccg
     2221 aaacgcttat agtaacgttt gattaacgcc agattacgct ctgacgacat aataatgtcg
     2281 gcataaagct gcggatcctg agcaaacagt cgcccgacca tcgccagctc aaggcggtaa
     2341 atcggcgaag agagcgccag aagttgctca agctgaacat tttcttctgc cagatgcagc
     2401 ccataagcaa aagtagcaaa gtggcgcaga gcctgaataa acgccatatt ctgatcgtgc
     2461 tcgacagcgc taatacgatg cagccgagcg ccccagacct gaatttgctc cagaaaccat
     2521 tggtatgctt ccggcttacg tccatcacac cagaccacaa cttgctttgc caggctaccg
     2581 ctgtccgggc cgaacatcgg gtgtaacccc agtaccgggc catcgtgcgc cgccagcatg
     2641 gcctgtaatg gtccattttt cactgatgcc agatcaacca gaatacaatc tttcggtaaa
     2701 ggcggtaatt tgccgataac ttgctcagta acgtggattg gcacactaac aatcaccatt
     2761 ccggcatcgg caacaatatc agccgctcga tcccagtcat gttgctccag aatccgcacc
     2821 tgataacccg agagtgtcag catcttctcg aacaggcgtc ccatctgacc gccaccgccg
     2881 acgataacca ccggacgcag tgacggacaa agtgttttaa atcctttgtc gttttcactg
     2941 gagtaagatt cacgcatcac ccgacgcaaa acatcctcaa tcagatctgg cggtaccccc
     3001 agagcttccg cctctgcacg acgcgaggcc aacatagatg cctcgcgctc cggaacataa
     3061 ataggcagtc caaagcggct tttcacctcg cccacttcag caaccagttc cagacgcttc
     3121 gctaataaat tcagcagcgc tttatcgact tcatcaattt gatcgcgtaa tgcggtcaat
     3181 tcagcaacca taataaacct cttaagccac gcgagccgtc agctgcccgt tcagatcctg
     3241 atgaatttca cgcagcaagg catcggtcat ttcccagcta atgcaggcat cggttacgga
     3301 tacaccgtat ttcatttcac tgcgcggttg ctcagaagac tgattgccct cgtggatatt
     3361 actttcgatc atcagaccaa taattgagcg attgccatct ttgatttgag caaccacgga
     3421 ttctgccacc gcaggctgac ggcgataatc tttattggaa ttaccgtggc tgcaatctac
     3481 catcagagac gggcgcagtc ccgcctgttc catctctttt tcacattgcg caacatccgc
     3541 agggctatag ttcggcgctt taccaccgcg caggatgaca tgcccgtccg gattcccctg
     3601 agtttgtagc aacgcaacct gccctgcctg gttaatgcca acaaaacggt gcggctgggc
     3661 ggcggcgcgc atagcgttaa ttgctgttgc cagactgccg tcggtgccgt ttttaaaacc
     3721 aaccggcatg gaaagcccgg aggccatttc acggtgagtt tgcgattccg ttgtacgagc
     3781 accaattgct gaccagctaa acagatcgcc caggtattgc gggctattcg gatctaacgc
     3841 ttccgtcgcc agtggcagtc ccatattcac cagctcaagc agcaatttac gcgcgatctg
     3901 cagcccggct tctacatcaa aagagccatc catatgggga tcgttaatta accctttcca
     3961 gccgacagtg gtacggggtt tttcaaaata gacgcgcatt accagataga ggctatcgct
     4021 gacctctgcg gcaagggctt taaatcgacg agcatattcc agagcagttt ccagatcatg
     4081 aatggaacaa ggaccacaaa ctaccagcag acgaggatcg cgcccggcga taatatctga
     4141 aatggtttta cgcgagtcag caatctgggc ttcttgttgc aggctcaatg gaaaagcggc
     4201 cttcagttgt tccggagtca ttaaaacctg ttcgtcggta atatgtacgt tattcagcgc
     4261 gtctttttgc atgatggcga tcctgtttat gctcgtttgc gatagttgat cctcagcgag
     4321 gatgacgtaa cgataacaca taaagtaaag ttttcaatcc atatttcgta cgcttttctt
     4381 tacacgaaca atttactcgc gctttgatgc ttatttcgta caaataaatt tacaccccct
     4441 ttaaaaacaa tccgctatgc tttgaaaaag gagaaagaaa tgatgaaaaa gtttatcgcc
     4501 cccttattgg ctttactggt tagcggatgt cagattgatc cttatactca cgcgccaacc
     4561 ttgaccagca ccgactggta tgatgtcggt atggaagatg cgatatcggg cagcgccata
     4621 aaagatgacg atgcatttgg cgattcacag gcggatcgcg gtctatacct taaaggatat
     4681 gccgaaggac aaaagaaaac ttgccagacc gattttactt atgcccgggg actttccggt
     4741 aaaagctttc ctgccagctg taacaatgtt gaaagtgcca gccaactgca tgaagtatgg
     4801 caaaaagggg ctgatgaaaa tgccagcaca atacgattaa attaattaaa accccacaaa
     4861 taaattaaac ataagatttt actcattgtg ttttatttct cacattgatg acgatcgcat
     4921 gaaaaaatga tattttaatg agcattctga aaaaatatcg atgcatttcg agcgaagaag
     4981 gtggggatcc ctgaatgcgt ttttctcacc gactgttctt acttctgatt ctcctgctga
     5041 cgggagcacc aatactcgct caggagcctt ctgacgttgc gaaaaacgtg cgtatgatgg
     5101 tttccggtat tgtcagttac acccgctggc ctgcgctatc agggccacca aagttatgta
     5161 tcttttcatc ttcacgtttt agtaccgccc tacaagagaa tgccgcgaca tctttgcctt
     5221 atctgcctgt catcattcac actcaacaag aggcgatgat ttcaggctgc aatggttttt
     5281 attttggcaa cgagtcaccg acattccaga tggaattaac cgaacaatat ccgtcaaagg
     5341 cgttattatt aattgccaaa caaaataccg agtgcattat tggtagcgcc ttttgtctga
     5401 tcatccacaa taatgacgtc agatttgccg taaacctgga tgccttatcg cgtagcggtg
     5461 taaaggtcaa cccggatgtc ttaatgctcg cacggaagaa aaatgatgga taacgataat
     5521 tctcttaata agcgccccac gtttaaaaga gcattacgca acatcagtat gaccagcata
     5581 tttatcacta tgatgctgat ctggttgctg ctttccgtga cctcggtgct gaccctgaaa
     5641 cagtacgcgc aaaaaaacct ggcactgaca gcagcaacaa tgacttacag tctggaagca
     5701 gctgtcgttt ttgccgatgg ccctgcagca actgaaacac tggcagcgct gggccagcaa
     5761 gggcaatttt caactgcaga agtacgtgat aagcagcaaa atattctggc gtcctggcat
     5821 tacacccgta aggatccagg cgatactttc agcaatttca taagccactg gctcttcccc
     5881 gcccccatca ttcagccgat tcgtcacaat ggtgaaacca ttggcgaagt acgcttaacc
     5941 gctcgcgaca gttcaatcag ccattttatc tggttttcgc tcgccgtact gaccggttgt
     6001 attctgctgg catcaggcat cgcaattacc ctcacccgcc atttgcacaa tggcctagtg
     6061 gaagcgctga aaaatatcac cgatgtcgta catgatgtgc gttccaaccg caatttttcc
     6121 cgacgagttt ctgaagaacg tatcgctgag tttcaccgct tcgctctcga cttcaacagt
     6181 ctgctggatg aaatggaaga gtggcagctt cgtttacagg ccaaaaatgc gcagcttctg
     6241 cgtaccgcgc tacatgaccc attaaccggg ctggctaacc gcgcagcgtt tcgtagcggc
     6301 atcaata
//
LOCUS       DAJVUK010000198         6282 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.198, whole genome shotgun sequence.
ACCESSION   DAJVUK010000198 DAJVUK010000000
VERSION     DAJVUK010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6282
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.198"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(85..621)
                     /gene="ssb1"
                     /locus_tag="OQQ57_003855"
     CDS             complement(85..621)
                     /gene="ssb1"
                     /locus_tag="OQQ57_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HCS1958427.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
                     PAAPSNEPPMDFDDDIPF"
     gene            875..3697
                     /gene="uvrA"
                     /locus_tag="OQQ57_003856"
     CDS             875..3697
                     /gene="uvrA"
                     /locus_tag="OQQ57_003856"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HCS1958428.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            complement(3732..4088)
                     /locus_tag="OQQ57_003857"
     CDS             complement(3732..4088)
                     /locus_tag="OQQ57_003857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HCS1958429.1"
                     /translation="MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLLPEEKRKLLVQL"
     gene            complement(4092..4508)
                     /locus_tag="OQQ57_003858"
     CDS             complement(4092..4508)
                     /locus_tag="OQQ57_003858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HCS1958430.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMQGTSLVL
                     PLHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            complement(4619..5332)
                     /gene="aphA"
                     /locus_tag="OQQ57_003859"
     CDS             complement(4619..5332)
                     /gene="aphA"
                     /locus_tag="OQQ57_003859"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HCS1958431.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            5733..5955
                     /locus_tag="OQQ57_003860"
                     /pseudo
     CDS             5733..5955
                     /locus_tag="OQQ57_003860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165333.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1588 a         1554 c         1565 g         1575 t
ORIGIN      
        1 cataacggag gcttcttttt tatggctggc agatgcttta atcatccacc ttaaaacaat
       61 ataacctatt gttttaatga caaatcagaa cggaatgtca tcatcaaagt ccatcggcgg
      121 ctcgttagac ggcgctgccg gagcggactg ctgcgggcga gactgcgcgc cgccgctgaa
      181 ctgattgcca ccctgcggct gctgaggctg accccaaccg ccctgcggct gaccaccacc
      241 gatattacca cctgccggag cgccaccacc ctgacgacca cccagcatct gcatggtgcc
      301 gccaacgttc accacgactt ctgtggtgta gcgatcctga ccggattgat cggtccattt
      361 acgggtacgc agctgacctt cgatataaac ctgagaacct ttacgcagat attcgctggc
      421 cacttctgcc agtttgccga acagcacaac gcggtgccat tcagtctgtt ctttcatctc
      481 gccggtcgct ttatcacgcc aggattcgga agtagccagc gtaatgttgg caactgcgcc
      541 accatttggc atgtagcgta cttccgggtc ctgacccaga ttaccaacga gaataacctt
      601 gtttacgcct ctgctggcca tgttcgtgtc tcctgaaaaa aatcgttctg aataagtgta
      661 aacgcgcgat tgtaccatta ccaatagcgc ttttactatg ttgtgacctc ggttccggga
      721 aacaaacctg gccagacatt gttacacaac actccggata atgcattcca atactgtata
      781 ttcattcagg tcaatttgtg tcataattaa ccgtttgtga tcgccggtag caccatgcca
      841 ccgggcaaaa aagcgtttaa tccgggaaag gtgaatggat aagatcgaag ttcggggcgc
      901 ccgcacccat aatctcaaaa acatcaacct cgttatcccc cgcgacaagc tcattgtcgt
      961 gaccgggctt tcgggttctg gcaaatcctc gctcgctttc gacaccttat atgccgaagg
     1021 gcagcgccgt tacgttgaat ccctttccgc ctacgcgcgg cagtttctgt cactgatgga
     1081 aaagccggac gtcgatcata ttgaggggct ttctcctgcc atctcaattg agcagaaatc
     1141 gacgtctcat aacccgcgtt ctacggtggg gacaatcacc gaaatccacg actatttgcg
     1201 tttgttgttc gcccgcgtcg gcgaaccgcg ctgtccggac cacgacgtcc cgctggcggc
     1261 gcaaaccgtc agccagatgg tggataacgt gctgtcgcag ccggaaggca agcgtctgat
     1321 gctactcgcg ccaatcatta aagaacgcaa aggcgaacac accaaaacgc tggagaacct
     1381 ggcaagccag ggttacatcc gtgctcgtat tgatggcgaa gtctgcgatc tttccgatcc
     1441 gccgaaactg gaactgcaaa agaaacacac tattgaagtg gtggttgatc gcttcaaggt
     1501 gcgtgacgat cttacccaac gtcttgcgga gtcgtttgaa accgcgctgg agctttccgg
     1561 tggtacagcg gtagtggcgg atatggacga cccgaaagcg gaagagctgc tgttctccgc
     1621 caacttcgcc tgcccaattt gcggctacag tatgcgtgaa ctggagccac gactgttttc
     1681 gtttaacaac ccggcaggtg cctgcccaac ctgtgacggc cttggcgtac agcaatattt
     1741 cgatcctgac cgcgtgatcc aaaaccccga gctgtcactg gctggcggtg cgatccgtgg
     1801 ctgggatcgc cgcaacttct attacttcca gatgctgaaa tcgctggcag atcactataa
     1861 gttcgacgtc gaagcgccgt ggggcagcct gagcgcgaac gtgcataaag tggtgttgta
     1921 cggttctggc aaagaaaaca ttgaattcaa atacatgaac gatcgtggcg atacctccat
     1981 ccgtcgtcat ccgttcgaag gcgtgctgca caatatggag cgccgttata aagagacaga
     2041 atccagtgcg gtacgtgaag aattagccaa gtttatcagc aatcgcccat gcgccagctg
     2101 cgaagggacg cgtctgcgtc gggaagcgcg ccacgtttat gtcgagaata cgccgctgcc
     2161 tgctatctcc gacatgagca tcggtcatgc gatggaattc ttcaacaatc tcaaactagc
     2221 tggtcagcgg gcgaagattg cagaaaaaat ccttaaagag atcggcgatc gtctgaaatt
     2281 cctcgttaac gtcggcctga attacctgac actttcccgc tcggcagaaa cactttccgg
     2341 cggtgaagcc cagcgtatcc gtctggcgag ccagattggt gcgggcctgg ttggcgttat
     2401 gtatgtactg gacgagccgt ctatcggcct gcaccagcgc gataacgagc gcctgttggg
     2461 tacgcttatc catctgcgcg atctcggtaa taccgtgatt gtggtggagc atgacgaaga
     2521 cgcaattcgc gccgctgacc atgtgatcga tatcggtcct ggtgcgggtg ttcacggcgg
     2581 tgaagtggtc gcagaaggtc cgctggaagc gatcatggcg gtgcctgaat cgttgaccgg
     2641 gcagtacatg agcggtaaac gcaagattga agtgccgaag aaacgcgttc cggcgaatcc
     2701 agaaaaagtg ctgaagctga caggtgcacg cggcaacaac ctgaaggacg tgacgctcac
     2761 gctgccagtc ggtctgttta cctgcatcac aggggtttca ggttccggta aatcgacgct
     2821 gattaacgac acactgttcc cgattgccca acgccagttg aatggtgcga ccatcgccga
     2881 accggcaccg tatcgcgata ttcaggggct ggagcatttc gataaagtga tcgatatcga
     2941 ccaaagccca attggtcgta ctccacgttc taacccggcg acctataccg gcgtgtttac
     3001 acctgtgcgc gaactgtttg cgggcgtacc ggaatcccgt gcgcgtggtt atacgccagg
     3061 acgtttcagc tttaacgtcc gtggcgggcg ctgcgaagcc tgtcagggcg acggtgtgat
     3121 caaagtggag atgcacttcc tgccggatat ctacgtgccg tgcgatcagt gcaaaggtaa
     3181 acgctataac cgtgaaacgc tggaaattaa gtacaaaggc aaaaccatcc acgaagtgct
     3241 ggatatgacc atcgaagagg cgcgtgagtt ctttgatgcg gtgccagctc tggcgcgtaa
     3301 gctgcaaacg ttgatggacg ttggtctgac gtacattcgc ctggggcagt ccgcaaccac
     3361 actttctggt ggtgaagccc agcgcgtgaa gctggcgcgt gagctgtcaa aacgcggcac
     3421 cgggcagacg ctgtatattc tcgacgagcc gaccaccggt ctgcacttcg ccgatattca
     3481 gcaactcctc gacgtgctgc ataaactgcg cgatcagggc aataccattg tggtgattga
     3541 gcacaatctc gacgtgatca aaaccgctga ctggattgtc gacctgggac cagaaggcgg
     3601 cagtggcggc ggcgaaatcc tcgtctccgg tacgccagaa accgtcgcgg agtgcgaagc
     3661 ttcgcatacg gcacgcttcc tcaagccgat gctgtaatcg ttaaggccgc tttctgagcg
     3721 gccttttcct ttcagagttg taccagcaat ttacgctttt cttccggtag taaattcact
     3781 gcctgctgat aagacgcatc caccagataa tagatttgcg aatccggcag cgaaccgtcg
     3841 agatacacgg tgctccagtg cgctttattc agatggcggc taggacgcac atcgctgtgc
     3901 tgctgacgta gcagctccgc cagctccggg ctggttttca gcgaaacagc tgggcgattt
     3961 tctacttctt tcaccatcgc aaacagtaca tcttccactt tgatctgcgt cgctttccag
     4021 tcgttatgca cgctctgttc tgcgcctagt tttgccatgc aatattgtag caactccgaa
     4081 atggtcattt tttactcccc ttgtagtgtc gcgatgatgc gacgcgatcc gccgtggatg
     4141 cgatgttccc ccagccagat gccttgccag gtgccggtct gaatacgccc tttatgtaac
     4201 ggcaatacaa gcgatgttcc ctgcattgag gatttgatat gagaaggcat atcgtctgct
     4261 ccctcatagt catgctcata atttccgttg tcgggaacgg tgcggaggaa aaaacgctcc
     4321 atgtcgtggc gtacggtggg atcgcagttc tcattaagtg tcagagaggc ggaggtatgt
     4381 tgcagcaaca gatgcagtaa gccgatgtta acgcgcggca tatcagccag ctgattcaga
     4441 atttcatccg ttaccagatg aaacccacga gatttggcgc taagcgtgag cgtcttttga
     4501 taccacatgt gctgctcctt gataaaactc tcttaatcag tttgcagcaa gacagcgaaa
     4561 ggataaaggt gtgattaaaa aaacagcatt cgggagagca tcacgctctc ccgctctgtc
     4621 agtattctga attgacgatc acctcttcac caaacgcacc cgcttgtggc aagggtttgt
     4681 aggtagagtt ggaggcgcgc agaatgcgga taccacgagc gccgacatcg cgtgcggcgg
     4741 taatatcatt atcagaatcg ccataaaaaa ttcggatatt tttatcctgc agccattgcg
     4801 attttgtatt ttgccctggt ttatcgcccg caaagatcac cggattcatg ttggtggcag
     4861 gaatatgaaa attatccgcc agcgtttttg aaaccgtttc tgttttcgtc ggactacgac
     4921 cagtcacaaa gaagatcgcg tcaccgcggc gtacatgcat atcaatcagc tggcgagcga
     4981 cctcttttgg aatgctgaat tcatcccagc cattgttcat tttttcccag aacacaggat
     5041 ttttcagata atcttcgctt tctggcgaga aggttttttt gccgcgccag aagcccgggc
     5101 tggaaaaaag taccgtgtca tcgatatcaa accccaccgc cattggcgga cgccctgcga
     5161 ggctattttc aatttgtgcg accgaaaccc aatgaattgg tgcctgttca gcaagcctgg
     5221 caacgttagt accagggtta agcggtgaag gagatgaggc cagggcaaca gcggaactgt
     5281 ttagagcgaa caataagcaa acggcactga ttgcctgtgt gatcttgcgc atatttttcc
     5341 ctaaatagtc agtatgttga aactttttat tgtgagattt gttgcaaaaa ccatctgacc
     5401 ataacgccag ctgcagggga aaggaaggat tatctgcggt ttttgtgatg aaaagcagga
     5461 tgattatatt taacccagta aatacgttcc tgtctttttt gtataaaaaa tgtttattac
     5521 tcgatgtaag gatacattaa ttttacgttt attatgatga atcctctgca aatgagcgaa
     5581 atttgataga acatttatct gctgtacgat ttaatgaact taatgataca gcattacaaa
     5641 aacaatcgaa gtttataaag atgattcctg attgaccaga accctatcct acaatggtga
     5701 ttaattttat tactcgcgat ggagatgatg atatgaatat atcatatatg aatagcaaca
     5761 aaacgacatc tttacctgtt gagctagatg cactaaataa taaagatatc tcttatgcca
     5821 aagatttttc ttatgtcaaa gatttctttt tatacataga aacacagtta aaaattgcaa
     5881 aagatttttg tagacttgga gaagaagtat caagttctat tgcaagtaaa gtttttcacg
     5941 catttattga tttagttaac aaaatcaggg gtaagaaaga ctttatgtat atttgcacgc
     6001 tttgctgttt tgccgaggag gttaaaggtg attattctca ttacaggacc tttttatttg
     6061 atattggtaa tcaatataag gttaaactta cacaaagcgg aaaaaaagag ttctctttaa
     6121 cattagaatt taacgatact ataattgaat ctcagaaagt cacaggcaat aaggcaaagc
     6181 atattcttga ggatatagaa atattctatc gtaacaaacc cgatacttat tattaaattt
     6241 aataatggtt agatgtgcag aaattattac tccacacgaa aa
//
LOCUS       DAJVUK010000199         6148 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.199, whole genome shotgun sequence.
ACCESSION   DAJVUK010000199 DAJVUK010000000
VERSION     DAJVUK010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6148
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.199"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            158..1618
                     /locus_tag="OQQ57_003861"
     CDS             158..1618
                     /locus_tag="OQQ57_003861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HCS1958432.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYKVNLIGGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQM
                     DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
                     VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDVKLAQWIEDNVTFP
                     STMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE
                     LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAP
                     TLKVQGVDLQDYANRLIERYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF
                     DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF
                     GDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(1654..1857)
                     /gene="ydfZ"
                     /locus_tag="OQQ57_003862"
     CDS             complement(1654..1857)
                     /gene="ydfZ"
                     /locus_tag="OQQ57_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HCS1958433.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(1854..2720)
                     /locus_tag="OQQ57_003863"
     CDS             complement(1854..2720)
                     /locus_tag="OQQ57_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCS1958434.1"
                     /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVR
                     FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAA
                     SMITESQCYQLEQNLHQQRIAIEHKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLK
                     ATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVARSA
                     RKTATGLAKSNSFTLIPSGMRGFSPRLTAHACIKKDVSLIKNKKYFTRQEYLYCARYV
                     GFDCKSERRKHL"
     gene            complement(2809..3555)
                     /gene="ydfG"
                     /locus_tag="OQQ57_003864"
     CDS             complement(2809..3555)
                     /gene="ydfG"
                     /locus_tag="OQQ57_003864"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HCS1958435.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            3692..5737
                     /gene="dcp"
                     /locus_tag="OQQ57_003865"
     CDS             3692..5737
                     /gene="dcp"
                     /locus_tag="OQQ57_003865"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HCS1958436.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQAKLL
                     GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            complement(5782..>6148)
                     /locus_tag="OQQ57_003866"
     CDS             complement(5782..>6148)
                     /locus_tag="OQQ57_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HCS1958437.1"
                     /translation="AAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAA
                     EMATGAIERADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCE
                     TVLALAVRFAHVQLLQLLL"
BASE COUNT         1538 a         1475 c         1580 g         1555 t
ORIGIN      
        1 gcgctggaag acgctgcgga agatcaaccg cgtgttgtaa gagctgcgca accttccaga
       61 agtctgtaaa ccctcaatcc cttctcttac cggagagggg atttttattc atataacaaa
      121 acatatagct tgccatattt aaatttaagg aattgttatg ggaaataatt tgttatcagc
      181 aaaagcgaca ctccctgttt atgatcgtaa taacctggcc ccaagaattg ttcatttagg
      241 ctttggtgca tttcaccgtg cgcatcaggg cgtgtatgcc gatattcttg ctacagaaca
      301 tttcagtgac tggggatatt ataaggtcaa cttaatcggc ggcgaacagc aaattgccga
      361 tttacaacag caagataatc tttataccgt tgcggaaatg tcggccgatg cgtggacggc
      421 tcgcgtcgtt ggcgtcgtta aaaaagcctt gcacgtacag atggatggct tagaaaccgt
      481 gttggctgcg atgtgtgaac cgcaaatcgc gattgtctct ctgacaatca ccgaaaaagg
      541 gtatttccac tctccggcga ccggacagtt aatgctcgat cacccgatgg tcgctgccga
      601 cgtgcaaaat ccccaccagc cgaaaacagc aacaggggtg attgttgagg cgctggcccg
      661 ccgtaaagcg gcaggacttc ccgcatttac cgtcatgtca tgtgacaaca tgccagaaaa
      721 cggtcatgtt atgcgtgacg ttgtcacttc atacgcgaaa gctgttgatg taaaactggc
      781 acaatggatc gaagataacg tgactttccc atcaacaatg gtggaccgta ttgtgcccgc
      841 agtgacagag gatacgctgg cgaaaatcga acaacttacc ggtgtgcgcg atcctgcggg
      901 cgttgcctgt gaacctttcc gccagtgggt aatagaagat aactttgttg ccggacgtcc
      961 agaatgggaa aaagcgggag ccgaactggt tagtgatgtg ctgccttatg aagagatgaa
     1021 gttgcgcatg ctcaacggca gtcattcatt cctggcgtat ttgggttatc ttgccggata
     1081 tcagcacatt aatgactgca tggaagatga acattatcgt tatgcggcgt atggcttgat
     1141 gttgcaggaa caagcgccga cgctgaaagt gcagggcgtt gatttgcaag attacgctaa
     1201 ccgattaatt gaacgctata gcaatccggc gttacgtcat cgaacctggc agattgcgat
     1261 ggatggtagc cagaaattgc cacagcggat gttggattct gttcgctggc atctggcgca
     1321 tgacagcaag ttcgatctgc tggcgctggg cgtcgcgggt tggatgcgtt atgtcggtgg
     1381 tgttgatgaa cagggaaatc cgatagaaat cagtgaccca ctgttacctg ttattcagaa
     1441 ggctgtacaa agtagtgccg aagggaaagc gcgcgtccag tcattgctgg cgattaaggc
     1501 aatctttggt gatgatttgc cagacaatag cttgtttact gcaaaagtga cggaagcgta
     1561 cttgtcttta ttagcgcatg gcgcgaaagc gaccgtggcg aaatattccg tgaagtaaaa
     1621 aaagcaatgc cgccatcggc ggcattcaca cacttagttc atgccgagac gaatcaggtc
     1681 cagaggtgcc agtttctctt cacaaccttc aacaactacg gtttttccgc ggcggatttg
     1741 ctcagcggtc agaccttcag tatcaatcga caggatcttg ccagtgtgac cggtgccgct
     1801 aaccataaca cggctgccag tggtgattgc gttacggtta cgatcgtagg tcgtcatagg
     1861 tgttttctcc tttctgattt acagtcgaag cccacgtaac gggcgcaata taaatactcc
     1921 tgtcgagtga aatatttttt gtttttgatc aagctcacat cttttttgat gcatgcatga
     1981 gccgtaaggc ggggggaaaa gcctctcatc ccggatggga tgagagtaaa tgaattactc
     2041 ttcgctaaac cagtcgctgt tttcctggcg gatctggcca cggattcgct gatttcctgc
     2101 aaatgttgcg tcattgcacg ttctaccgca tcgccatcac gtttttgcag ggcagagaaa
     2161 atatcaagat gctggcgtaa cagcatttct ggtggagaaa catggtcgaa actcatatag
     2221 cgcacgcgat caacggtcgc tttcaggttc tcaatggtat cccacgccag ttgacagtcg
     2281 gcaatctgcg tcaggagttg atggaagttg tcatcaagtt caaaaaaatc atccagttgc
     2341 ttgtgctcaa tggcaatgcg ttgctggtga agattttgtt ccagttggta gcactggctt
     2401 tcggtaatca tgctcgccgc ccgacgcgcc accgcgcact caatggcctg acggataaaa
     2461 ctgccgttgc gcacctgggc catggaaatt ttgttgacgt agctgccacg ctgtggacga
     2521 atttgaatca ggccgttttc cgccagttta ataaaggctt cacgaaccgg ctggcgtgac
     2581 acattgaaac gaacagaaac ttctttttcc gacaacggtg tgcctggagc aatcaggcaa
     2641 tggacaatgt cgcgacgaag gatacgataa atttgctgat tgacaggctg tgtgggatta
     2701 agttgcgttt cgacggtcat tcgttcttgc ttgtgagtga gttaactgca tgagtctacc
     2761 acttttttgt gacaagcaat aacccggcag ttacgccggg tataaaaatt actgacggtg
     2821 gacattcagt ccggcatagc tttgggtaac cggcatcatt tccagggtat tgatattgac
     2881 gtgagcaggc agcgttgaca cccaccaaac ggcttcgctg acatcttctg gcgtcaatgc
     2941 aacggtattt tgataggttt tttccgcttt accgtcatcg cctttaaagc ggacattgga
     3001 aaactcggtg ccacccacca gacccggttc gatgtcggtg acgcgcaccg ccgtaccatg
     3061 caggtccgta cgcagattca ggctaaactg acgaacaaac gctttcgtcg caccgtaaac
     3121 gttaccaccg gcataaggcc agctacctgc cgttgagcca atgttaataa tatgaccatg
     3181 attacgttca accatacccg gtaagacggc gcgcgtcata tataccaggc ctttgttgtt
     3241 ggtatcaatc atcgtttccc agtcttcaac gctggcttta tgcgcaggct ccatgcccaa
     3301 cgccaggccg gcattattta ccaggatatc aatattgcac cactcggcag gaagcgatgc
     3361 cagcatctct tcaatagcgg cgcggttgcg aacgtccagt tgggcgatgt acagattatc
     3421 tcccagttcg tcttttaact cctgcaaccg ttcctggcga cggccagtgg cgataacttt
     3481 atgcccttgt tgaataaaac gacgagtaat gcattcacca aaacctgccg ttgctccagt
     3541 tactaaaacg atcatctcac tgttcctcaa cgcttttgtg tgtcaataac atagcacgtg
     3601 atgcttaaga gcgggtaata ctggtttgta agattgcact ccgttatcag taagcctacg
     3661 ctatggaaca cctcgcgttc aggagaagaa aatgacaaca atgaatcctt tccttgtgca
     3721 aagcacacta ccgtatctgg ctccccattt tgatcaaatt gccaatcatc actatcgccc
     3781 ggcattcgat gagggaatgc agcaaaagcg ggcagaaatt gctgccatcg cgcttaaccc
     3841 gcaaacgcct gatttcaaca atactattct ggcactggaa caaagcggag aattacttac
     3901 ccgcgttacc agcgtctttt ttgcgatgac tgcggcgcat accaatgatg aattacagcg
     3961 tcttgatgaa cagttttccg ctgaactggc ggaactggct aatgatatct atctgaacgg
     4021 tgaattattc gcgcgggtag atgctgtctg gcagcgccgt gaatccctgg ggcttgatag
     4081 tgaatccatc cgcctggtgg aggtgattca tcaacgtttt gtccttgccg gagccaaact
     4141 tgcgcaagct gataaagcaa aattaaaagt actgaataca gaagctgcga ccctgaccag
     4201 ccagtttaac cagcgattac tggcagcaaa taaatccggc ggtctggttg tgaacgatat
     4261 cgcgcagctg gcaggaatga gtgagcaaga gattgcgctg gcggcagagg cggctcgcga
     4321 gaaaggtctg gataacaaat ggctgattcc gctgctgaat accacccaac aaccggcgct
     4381 tgccgagatg cgcgatcgtg cgacgcgtga aaaactgttt attgcgggct ggacgcgagc
     4441 ggaaaaaaat gatgccaatg atacccgcgc tatcattcaa cgtctggtag agattcgcgc
     4501 acagcaggcg aaactgcttg gttttcctca ttatgccgca tggaaaatcg ccgatcagat
     4561 ggcaaaaacg ccagaagcag cactcaactt tatgcgggaa attgttccag cggcgcgtca
     4621 acgtgctagc gatgaattag cctccataca ggcggttatc gataagcagc aaggcgggtt
     4681 tagcgcgcag ccgtgggact gggcatttta tgccgaacag gtacggcggg agaaatttga
     4741 tcttgatgag gcgcagctca agccatattt tgaattaaac acggtgttga atgaaggtgt
     4801 attctggacc gcgaatcagc tcttcggtat taagtttgtc gaacgttttg atattcctgt
     4861 ctaccatcct gacgttcgtg tgtgggaaat ttttgatcat aatggcgtgg gactggcgtt
     4921 attttacggt gatttcttcg cccgtgattc aaaaagcggc ggtgcatgga tgggcaattt
     4981 tgttgagcaa tcaacgctta atgaaacgca tccggtaatt tataacgttt gcaattatca
     5041 gaaacccgct gccggtgagc ctgcgttgtt actctgggat gatgtcataa ccttattcca
     5101 tgaatttggt catacgctgc acggcctttt tgcccgccag cgttatgcca cgctttccgg
     5161 caccaacacg ccgcgtgatt ttgtcgaatt tccgtcgcaa atcaacgaac actgggcaac
     5221 gcatccgcag gtattcgctc gctacgcccg gcattatcag agcggggcag caatgcctga
     5281 cgaactgcaa cagaaaatgc gtaatgccag cctgttcaac aaagggtatg agatgagcga
     5341 actgcttagc gccgcacttc tcgatatgcg ctggcattgc ctggaagaaa acgaagcaat
     5401 gcaggatgtc gatgattttg aattgcgggc gctggtggcg gaaaatatgg atcttcctgc
     5461 tataccgcca cgctatcgca gcagttattt cgcccatatt tttggtggcg gatatgctgc
     5521 aggttattac gcttatctgt ggacgcaaat gttggccgat gatgggtacc agtggtttgt
     5581 tgagcagggc ggattaacgc gtgaaaatgg gcagcgtttt cgcgaggcga tcctttccag
     5641 aggtaacagc gaagatctgg aacgcctgta tcgacaatgg cgcggtaagg ctcctcagat
     5701 tatgccgatg ctgcaacatc gtggcttgaa tatataaaca ccaccaatgg ctggcctgga
     5761 gatatcgcca ggccagcctg gttatagcag taattgcagc agctggacgt gggcaaacct
     5821 caccgctaaa gctaataccg tttcgcagtc gccagcaaaa tgcataaccg cagtgtaggt
     5881 ctggccttta atatgccacg cgaaccagac ggtacccgct ggcgtaccat cttcaccgcc
     5941 ctccagtccg ccgtagccgg taatggcaat actgacatca gcatccgcac gctctatggc
     6001 acctgttgcc atttctgctg ccactttctc actcaccgca gaatatcgtt caagagattg
     6061 ctggcttacg ctgaggattt tcatctttgc ctgatcggtg aaagtaacaa agcctgcacc
     6121 gtaaaatttg ggtgtatctt cagctgca
//
LOCUS       DAJVUK010000200         6052 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.200, whole genome shotgun sequence.
ACCESSION   DAJVUK010000200 DAJVUK010000000
VERSION     DAJVUK010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6052
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.200"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(95..2197)
                     /locus_tag="OQQ57_003867"
     CDS             complement(95..2197)
                     /locus_tag="OQQ57_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HCS1958438.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN
                     LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYGVGMNIAWRFE"
     gene            2439..3500
                     /locus_tag="OQQ57_003868"
     CDS             2439..3500
                     /locus_tag="OQQ57_003868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HCS1958439.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            complement(3613..5112)
                     /gene="ansP"
                     /locus_tag="OQQ57_003869"
     CDS             complement(3613..5112)
                     /gene="ansP"
                     /locus_tag="OQQ57_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HCS1958440.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            5379..5996
                     /locus_tag="OQQ57_003870"
     CDS             5379..5996
                     /locus_tag="OQQ57_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HCS1958441.1"
                     /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRELL
                     KTLNPLCQIPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVA
                     NVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDC
                     YLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII"
BASE COUNT         1612 a         1537 c         1443 g         1460 t
ORIGIN      
        1 gtcttgctga aattatgcaa caaaatattg ctattttata ccagcaatac aatcgttaaa
       61 gtaaatgccc ggcaaatacc gggcatcaag gtaattactc aaatctccac gcaatattca
      121 tgccgacacc ataatttcgt ccgggcgaag gttcgtaata tctcccgttt gactcattga
      181 caatgacaga accaacgtat tctttatcga ataaattatc gacacgacca aataaatcca
      241 cagttaaatt gtggtaattg tatttatacc cggtgaataa gccgacgaga gtataagacg
      301 gcgcttttgc cgtattttca tcatctgcca taatatcgcc catataacgc gcttccgtgc
      361 ctgcatacca accatcttcc ggtacataac ctatcgacgc aaagcccata ttacgggcga
      421 tccctggcat ccgattaccg ttacaatcct gttcattgca aacattgctg cgataggtcg
      481 catcaagcca ggtccaggac gcgtttacgc gaaaatctcc tgcgaaacgt tgatcccatg
      541 ccagttcagc gccttgacga cgggtctttc cggcattttt gtaagtcgta cgcccaccgc
      601 tactgctatc gacaacaatt tcatcatcag tgtcggtctg aaacaatgcg agactaagca
      661 gcccatcacc aatacgcgtt ttactgccga tctcaattgt atcgttggtg gatggtttta
      721 aaccaaagtt cataccgctt tgcccatcag cacgataaga cagctcatta atcgtcggcg
      781 tttcaaaacc tcgcccggct gccagataga tattccaggc atcggtcatt gcatatttta
      841 acgaaccggc aggtagccat ttatgataac tggcatcacc gctgtcatcg ccgttacccg
      901 gagtaacgta atggtcgttg gaatcaaacc acacggagct gtagcgcacg ccagcatcca
      961 gcgacagttt ttcgctcagc tgccactgcg tctgtaaata gggatcgatg ttccacatca
     1021 gattgcgttc gtcgcgacgc aactcacctt tttgcccgta ctccggcatg ccgctattca
     1081 ggcggaagtt attgtagccc ttgcggtttt cactcatgtt ttcgtagttc aggccggtag
     1141 tgaacgtgac cggaacgccc agttcaccac ggtgtgtcca gcggctgtct atcccctggt
     1201 aatggcgttg cagggtaatc acgccgcccg catgtgacgg gttaagttgt ggtgccatgg
     1261 gtattgactg gtactgggtc gtttctcgct ctccggcata catcatcaca ctcatatcat
     1321 cttgcgcgct caggctacgc tcatagcgca acccagcctg agtttgcttg atggtttttc
     1381 gcgtgtcgta ctgttctgca cgaggcgctt gttgtggatt agccttccat tctgctttgg
     1441 ttagcccacc tgggtcatct gctttgatat ccacactatt gaaaatcaga cttaatttgc
     1501 tggcttcatc aatgcgtacg cccagtttgg cattggctaa atttttctgt gcgccactat
     1561 ggtcacgata gccgtgggtc gtaaaacgcg tggttgagac ggtgtaatcg acatcgccag
     1621 gctgtgtgcc gtctcccgtt gcgcccgttg ctttcagccc atagcgccag ctgccaaaac
     1681 tgccgtagta actactggct tcaatggttg gtggctgttg tccggtctgg gtggtgacat
     1741 tcattacccc accagacgcg ttgccataca gggcagagaa ggggccacgc agcacttcca
     1801 cattttgcac actgcttaaa tcgatgttgg atgtttgccc ttgcccgtcg ggcatggtgg
     1861 cgggaatacc gtccacatac aggcgaatac cgcgaatacc gtaagtggag cgggagccaa
     1921 atccgcgaat cgacagctgt aaatcttgcg catagttctg ccggttttgt acctgcaaac
     1981 caggcacgcc ggtcagtgat tcggacaagt taatgcgcgg tgttgccagg cgcatctcct
     2041 cgccatccac cacgcttact gctgctgggg tatccagttc tgaaaccacc tgcggtgcgg
     2101 cactgacaat catagtctgt tcatcagcgg caaaaacaac gggggaaagg acaagcagtg
     2161 cgggcaaaac ggtctgtcgg acggaaaaaa tcttcatgaa aaaagccagg ttaagaatgg
     2221 gaaaacgctg tcatggtaat aaaattgtaa acttatgcaa aacgaaacgg cacgatacgt
     2281 taattaattg agaaaattgt agtcgtaacg gcaagaaatg ctccacattt gagaaaataa
     2341 tgattaccat tcccatttat aacaagagcg tgacgatgat tacgcttagc gaagcattgt
     2401 gaagcagcaa aaatattggt tcatcaaagg gagtcgtcat gcatttacgt catctgtttt
     2461 catcgcgcct gcgtggttca ttactgttag gttcattgct tgttgcttca tcattcagta
     2521 cgcaggccgc agaagaaatg ctgcgtaaag cggtaggtaa aggtgcctac gaaatggctt
     2581 atagccagca agaaaacgcg ctgtggctcg ccacttcgca aagccgcaaa ctggataaag
     2641 gtggcgtggt ttatcgtctt gatccggtca ctctggaagt gacgcaggcg atccataacg
     2701 atctcaagcc gtttggtgcc accatcaata acacgactca gacgttgtgg tttggtaaca
     2761 ccgtaaacag cgcggtcacg gcgatagatg ccaaaacggg cgaagtgaaa ggccgtctgg
     2821 tgctggatga tcgtaagcgc acggaagagg tgcgcccgct gcaaccgcgt gagctggtag
     2881 ctgatgatgc cacgaacacc gtttacatca gtggtattgg taaagagagc gtgatttggg
     2941 tcgttgatgg cgagaatatc aaactgaaaa ccgccatcca gaacaccggt aaaatgagta
     3001 ccggtctggc gcttgatagc aaaggcaaac gtctttacac cactaacgct gacggcgaat
     3061 tgattaccat cgacaccgcc gacaataaaa tcctcagccg taaaaagctg ctggatgacg
     3121 gcaaagagca cttctttatc aacatcagcc ttgataccgc caggcagcgt gcatttatca
     3181 ccgattctaa agcggcagaa gtgttagtgg tcgatacccg taatggcaat attctggcga
     3241 aggttgcggc accggaatca ctggctgtgc tgtttaaccc cgcgcgtaat gaagcctacg
     3301 taacgcatcg tcaggcaggt aaagtcagtg tgattgacgc gaaaagctat aaagtggtga
     3361 aaacgttcga tacgccgact catccaaaca gcctggcgct gtctgccgat ggcaaaacgc
     3421 tgtatgtcag tgtgaaacaa aaatccacta aacagcagga agctacccag ccagacgatg
     3481 tgattcgtat tgcgctgtaa tagatatggc gagggtgaaa acggtgagac ttgcctgcct
     3541 tttatcacgg cgtatccggc actttcgtca gtaatctgaa tttgcccggc acgtagccgg
     3601 gcaattttgc aattaactcg ccgtttcagg cttaaacaca atttcctgtt tttcttcatc
     3661 ttcctcgacg actggcgcag tgctgtgaat ttcagcaacg cgtttgcgca caccaaacca
     3721 gcctataacc agcagaatac cgataatcgg cagcgccgcg atagtataag tcccgttcgg
     3781 gtaatcgaac gccatcagca caaggacact cagtaaaaac agtaatgtca gccaggaagt
     3841 gaagggcgcg ccaggcagtt taaaactgac atccgctgct ttgccttctt taatcgcttt
     3901 acgcaggcgc atctggcaca cgatgataaa cgcccatgaa gcgatgattc ccagcgacgc
     3961 gaagttcaac acaatctcaa atacgcgcga cggcaccaga tagttgagga atacgccgac
     4021 gacatacaca accagtgtcg ctagaatccc ggcatacggc acatgctgac gactcatttt
     4081 cgccataaaa ctcggtgcgg aaccgcccat cgccattgag cgcagaatac gtccagtgca
     4141 gtacagacct gagttcaggc tggagagggc agcggtcagc accacaatgt tcataatgct
     4201 gccgatatat ggcacaccca gtttagagaa aaacgtcacg aacggacttt gccccgcctg
     4261 atacgcgctc cacggcaata acataaccag caacaccacg gagccgacgt aaaacaggcc
     4321 aatacgccaa atcacactgt taatggcttt aggcaccatg gtctgcggat ctttacattc
     4381 tccggcagct gtacccacca tttcaatgga ggcaaaagca aacactacgc cctgaatcaa
     4441 caccagcgca ggcagcaaac cgtgggggaa gaagccgcca ttatcggtga ttaaatgaaa
     4501 gccagtggtg ttgccatcca gcggctgacc actaccgagg aacactgtac ccacgaccaa
     4561 aaaggtcaca atggcgagca ctttaataag cgcaaaccag aactccatct ccgcaaacca
     4621 tttcacaccg atcatattca tggtgccaac gatggtaagt gcagcgagcg caaagaccca
     4681 ctgcggcacg ccgccaaacg caccccagta atgcatatac agagcgacgg cggtaatatc
     4741 aacaatcccc gtcatcgccc agttgatgaa gtacatccag ccagcaacat aagcggcttt
     4801 ctcacccaaa aactcacggg cataagagac aaaactgcca ctggaagggc ggtgtagcac
     4861 cagctcaccc aatgcacgca gaataaaaaa cgaaaacaag ccacaaatta aataaaccag
     4921 tgccagtgct ggacccgcca tttgcagtcg ggctcctgca cctaaaaaca agccggtgcc
     4981 aatcgcgccg ccaatggcga tcatctgtac ctggcgattg cccatcgctt tgtgataccc
     5041 ctcttcgtgg gcattaagcc agcggcgttt cgcggcgtgt tgatctgaag tgtcggtgtc
     5101 gtgtttactc attgctctcc ctgattgctt taatgaaaaa gtcatataag ttgccatgaa
     5161 caatgtttat tcatcctggc gatgatagtt atcaccatta ttctttatgg gtataaaact
     5221 atcggcgcag catcctaccc gttatcgata tacgatgcaa aacatcccct tacaatcctg
     5281 aaggggattc atacaactga cgaaaaaatg acaaatactt ttgctggtta acctgtgtac
     5341 tgtcctacac ttaatcttta aaagattgtg aggggcatat gattaaggtg tatggcgtac
     5401 ccggatgggg ctctacaatc agtgagctga tgctaacact ggctgatatt ccttatcagt
     5461 tcgttgatgt cagtggtttt gaccacgagg gaacttcacg cgagttattg aaaaccctga
     5521 acccgttgtg tcagattccg acactggcgc tggaaaatga cgagattatg acggagacag
     5581 cggcgattgc attgatggtt ctcgatcgtc gcccggacct tgcgccaccg gttgggcgcg
     5641 ccgaacgtca gcagtttcaa cggctattgg tctggctggt tgctaatgtc tatccaacat
     5701 tcactttcgc cgattaccct gagcgttggg ctcctgacgc acctgaacag ttaaagaaga
     5761 atgttattga atatcgtaaa tcgctttata tctggctgaa ttcacaattg accgctgaac
     5821 cttatgcgtt tggtgagcaa ctaacgctgg tggactgtta tctttgcact atgcgcacat
     5881 gggggcctgg gcatgaatgg tttcaggata atgccacgaa tatcagtgcg attgctgatg
     5941 ctgtatgtca gttaccgaaa ttacaagaag tattaaaaag gaatgaaatt atttgagtgg
     6001 gataccagag gattatgtta tttattattc agtaacttta tccacaatga tg
//
LOCUS       DAJVUK010000201         6051 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.201, whole genome shotgun sequence.
ACCESSION   DAJVUK010000201 DAJVUK010000000
VERSION     DAJVUK010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6051
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.201"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(25..393)
                     /locus_tag="OQQ57_003871"
     CDS             complement(25..393)
                     /locus_tag="OQQ57_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958442.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD
                     GKRSGKINQITTKMLFMCRE"
     gene            919..1614
                     /gene="minC"
                     /locus_tag="OQQ57_003872"
     CDS             919..1614
                     /gene="minC"
                     /locus_tag="OQQ57_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HCS1958443.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPAPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            1638..2450
                     /gene="minD"
                     /locus_tag="OQQ57_003873"
     CDS             1638..2450
                     /gene="minD"
                     /locus_tag="OQQ57_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HCS1958444.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            2454..2720
                     /gene="minE"
                     /locus_tag="OQQ57_003874"
     CDS             2454..2720
                     /gene="minE"
                     /locus_tag="OQQ57_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HCS1958445.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(3199..3318)
                     /locus_tag="OQQ57_003875"
     CDS             complement(3199..3318)
                     /locus_tag="OQQ57_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HCS1958446.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(3279..3464)
                     /locus_tag="OQQ57_003876"
     CDS             complement(3279..3464)
                     /locus_tag="OQQ57_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958447.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TAFKKCLFLMRDIIISS"
     gene            3565..3738
                     /locus_tag="OQQ57_003877"
     CDS             3565..3738
                     /locus_tag="OQQ57_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958448.1"
                     /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED
                     EIIVRATYLIPDI"
     gene            3740..4084
                     /locus_tag="OQQ57_003878"
     CDS             3740..4084
                     /locus_tag="OQQ57_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415690.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HCS1958449.1"
                     /translation="MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNG
                     VNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVI
                     GGTGGAILGKMK"
     gene            4088..4423
                     /locus_tag="OQQ57_003879"
     CDS             4088..4423
                     /locus_tag="OQQ57_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HCS1958450.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(4480..6051)
                     /locus_tag="OQQ57_003880"
                     /pseudo
     CDS             complement(4480..6051)
                     /locus_tag="OQQ57_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707067.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         1662 a         1397 c         1385 g         1607 t
ORIGIN      
        1 atagaacata atgtaaacaa ggcatcactc acgacacata aataacatct ttgtggtgat
       61 ttgattgatt tttccactcc gcttaccatc cacaccaaaa taacgatcat cacgacataa
      121 tttttcttta acatcgcaaa atacaccgtt agcgaatgta aattcgctgg gatcgtagcc
      181 ttgtaatgat tgtaagtttt cagcggcttt ttcgccgaga tatttccttg ttaactctgg
      241 ggaaatgcca tctgagttca cacaaatata cgggtcgcaa acaacgccgc acgccggaga
      301 ttgaagtccg ccagcgtcat gtccagacgc cattgatgag aacatcatcc ccacacctga
      361 caatccgata taaaaaatac gcatcatatt catagcacat cctgataatc caaccgtaca
      421 acacttatgc tcatttcatc atcaatccgt aatcaaaacc gctgacctgg acgagttacg
      481 atgacctgac agaagtatca gacgtcttct gcggtttcta tgattatgat agagcaattc
      541 tatggcggat attaagataa cgggtatctg ttctttaatg atgctgcaaa aaatggaaag
      601 ttaagaaagc ctggcgtggt gaaaaaatac acttgcctca atactggata tttaaacagg
      661 tctggagatg ctgtcacgat tagggtgcgg aaaaaggaag cgtaaataag aacaatcaaa
      721 agtacgacgg caatgggttg attgacaagg gtatttttta agctatgaat cagcgccatt
      781 tatcacagaa tagactttta ctctgaataa atgggagggt gacttgcctc aatataatcc
      841 agactataac atgccttata gtcttcggaa catcatcgcg cgctggcgat gattaatagc
      901 taattgagta aggccaggat gtcaaacacg ccaatcgagc ttaaaggcag tagcttcact
      961 ttatctgtgg ttcatctgca tgaggcagaa cctaaggtta tccatcaggc gctggaagac
     1021 aaaatcgctc aggcccccgc atttttaaaa catgcccccg ttgtactcaa cgtcagtgca
     1081 ctggaagacc cggtaaactg gtcagcgatg cataaggcgg tgtcggcaac cggtttgcgg
     1141 gttattggcg taagtggctg caaagatgcg caacttaaag ccgaaattga aaagatgggg
     1201 ctgcctatcc tgacggaagg aaaggaaaaa gcgccgcgtc cagctcccgc accacaggct
     1261 ccagcgcaaa atacaacgcc ggtcacaaaa acgcgtttaa tagatacccc ggtgcgttcc
     1321 ggtcagcgta tttatgctcc acaatgtgat ctgattgtta caagccacgt tagcgctggg
     1381 gccgaattga ttgccgatgg gaacattcat gtctatggca tgatgcgcgg tcgtgcgctt
     1441 gcaggggcaa gtggtgaccg ggaaacgcaa atattttgta cgaacctgat ggcggaactg
     1501 gtgtccatcg caggtgaata ctggctgagt gatcaaatcc cagcagaatt ttatggcaaa
     1561 gcggcgcgac tgcagttagt cgaaaacgct ttgaccgttc aaccgttaaa ttgatccctt
     1621 tttaacaagg aatttctatg gcacgcatta ttgttgttac ttcgggcaaa gggggggttg
     1681 gtaagacaac ctccagcgcg gccatcgcca ctggtttggc ccagaaggga aagaaaactg
     1741 tcgtgataga ttttgatatc ggcctgcgta atctcgacct gattatgggt tgtgaacgcc
     1801 gggtcgttta cgatttcgtc aacgtcattc agggcgatgc aacgctaaat caggcgttaa
     1861 ttaaagataa gcgtactgaa aatctctata ttcttccggc atcgcaaaca cgcgataaag
     1921 atgccctcac ccgtgaaggg gtcgccaaag ttcttgatga tctgaaagcg atggattttg
     1981 aatttatcgt ttgtgactcc ccggcaggga ttgaaaccgg tgcgttaatg gcactctatt
     2041 ttgcagacga agccattatt accaccaacc cggaagtctc ctcagtacgc gattctgacc
     2101 gtattttagg cattctggcg tcgaaatcac gccgcgcaga aaatggcgaa gagcctatta
     2161 aagagcacct gctgttaacg cgctataacc caggccgcgt aagcagaggt gacatgctga
     2221 gcatggaaga tgtgctggag atcctgcgca tcaaactcgt cggcgtgatc ccagaggatc
     2281 aatcagtgtt gcgcgcctct aaccagggtg aaccggtcat tctcgacatt aacgccgatg
     2341 cgggtaaagc ctacgcagat accgtagaac gtctgttggg agaagaacgt cctttccgct
     2401 tcattgaaga agagaagaaa ggcttcctca aacgcttgtt cggaggataa gttatggcat
     2461 tactcgattt ctttctctcg cggaagaaaa acacagccaa cattgcaaaa gaacggctgc
     2521 agattattgt tgctgaacgc cgtcgcagcg atgcagaacc gcattatctg ccgcagttgc
     2581 gtaaagatat tcttgaggtc atttgtaaat acgtacaaat tgatcctgag atggtaaccg
     2641 tacagcttga gcaaaaagat ggcgatattt ctattcttga gctgaacgtg accttaccgg
     2701 aagcagaaga gctgaaataa gcccgctgta aaaacgcatt tatcttcaag gcagagtcat
     2761 ttctgccttg agtttttcat ccctctcatc cacgttgtgg taaagcggcg agtattcttg
     2821 ctgatactcc tcattgctat ttccacctcc ccctttacac cttaaggctg ttcccacgca
     2881 cagaacaaaa tgtttatgcc tggttgagta aataacctca ttgttagtgt ggatacactg
     2941 ggggatgata accccgcaat ttcattattc attgttctcc cataggatga ggtttcccgc
     3001 cgtaactggc gggctttttt tgccccagaa ttttcccttt tagccccctg taaacgaaaa
     3061 ctgcgccgaa gcgcagttta atcgttgatg gtcagaacga ccagttcacg atatatactg
     3121 cgggtatcga ctgatttcga ttccatgcca ttggataaat gatagtagcg tctaagtgac
     3181 ctaagctctg ctgcaacatc agcccgcagg caccagacca ggggattcat cctgaagaga
     3241 cagcgcaggt gtattgtgtt caccactcac caaagacatc atgatgaaat gatgatatcc
     3301 cgcataagaa agaggcattt tttaaacgca gtgcgctgaa gtgtagttgg ataaaaaatc
     3361 actcttttca gataatactg tcgtacgctt atctttcgac aatgaggccg tcggcaaaat
     3421 aaaatgacta atgtaatcgt tgctgatgaa tatcttctgc tcacataaaa atcacacaat
     3481 aatattgata aatcagatta tcttaccttt acaacattgc gttaacagtc aatgacactt
     3541 cttgaataaa aatattgcta atcaatgagt tattcctcat ttaagattat tctcattcac
     3601 gtaaaaaaca taattcctat catcacagcc acgctcattt tgaattatct gaataatagc
     3661 gagcgttctt tagttaagca gatcttaatt gaagacgaaa ttattgtgcg tgcaacttac
     3721 ttaataccgg acatctaagt tgaagaaaaa aatacttgcc ttcgggctta tctcagcatt
     3781 gttctgctcc acgccagcga tggcggatat gaatcgcacc acgaaaggtg cattgctagg
     3841 cgcaggcgtt ggtttactta ctggcaatgg tgttaatggc gtactgaaag gtgcagctgt
     3901 tggcgctggt gttggtgcag taacagaaaa aggccgcgac ggtaaaaatg cgcgtaaagg
     3961 tgcaaaagta ggtgccgccg ttggtgctgt cactggcgtt ctgaccggca atggcctcga
     4021 aggggcgatt aaaggtgccg tgattggcgg tacgggtggt gcaattctgg gtaaaatgaa
     4081 ataaggaatg atgatgaaaa aatttgcttt actggcgggc ctgtttgttt tcgcaccaat
     4141 gacctgggcg caggactaca atattaaaaa cggtttaccg tcagaaacct atattacttg
     4201 cgcagaagcc aacgaaatgg caaaaactga cagcgcacag gttgcagaaa ttgttgcggt
     4261 aatgggtaat gccagcgttg ccagccgtga tttaaaaatt gagcaatctc cggaactgag
     4321 cgccaaagtg gtagaaaaac tgaatcaggt ttgcgctaaa gacccgcaaa tgctgttgat
     4381 cacggcaatt gatgacacca tgcgtgctat cggcaaaaaa taatatttca tatgtaccgc
     4441 gtcgatgaat acgacgcggt tttttagcta acggcgggat cagaacttat atttcaggcc
     4501 caccatcact gcggtgtcat tgtagccatt atcacccagc tgcacgccca cattccccca
     4561 gacgctggcc gctggattca ggttgccatt tacgccaagt ttaatttccc ccaaattact
     4621 cgccccatct tgttcgactt tcacaccgtt cattgagaca gcaaaatctt tactgttatg
     4681 gatccagttc atttcaacaa aaggttcaaa gtcgtcaccg tgcggaccgc tgtttttctc
     4741 ctgagtacga ataaaggtgc ggaaaccaag tcgggtctgg atgttgttat ttgcgtcatt
     4801 ctcaatacgt gagccattgg cttcggtgtg cgcattatga tcgacgccca tccagatagc
     4861 ctgtgcctgt ggctggaata tccacgtgta tttcgccgct tccagaccaa aggatttatt
     4921 cagggcaaag ccctaacccg cttccagcga gacggttgcg cctttcgcac tataggattc
     4981 ataggctaat tcatcccctt tcaccgagtt tttaaaccag ctatattgcg cccaggcgtc
     5041 aatgtatgcg ccttttttac tgatgtcatc ggcaaaccaa gtggcataca gccctgcgca
     5101 atagcctctg acactccctt tcgaacgata atccgacacg ctggaatgag ttgagttgta
     5161 gtcgcgggca taaccagcca tcactcccaa acgccaactg tcactgtcgg taaaaccacc
     5221 ggttaacaga tcggccccta actgcgagac gtagcgatgc gaggtcgttc tcaactgtcc
     5281 gttgctgtca cgccaggcat tatgcccgcc aatttgacgt agccaaagtc ggcttgaacg
     5341 ctcctgttca gttacaggat cgatgtagcg catttcaccc gcacggtcgt tcagacgcat
     5401 aacaaaaaga gtgttagcgg ctgccaggtt ggcgacgtaa cttccagctt cggggcgcag
     5461 gacgggggta ggcgtttctg ttggttctga atttccctct gagctgttat cctcctcatt
     5521 cactgactga taacttgtca aataccagtt tttgccttgt tgttttagtt gatattcgaa
     5581 agctccagct gcaatccttg catcaccttg tctgaaggct tctgctggag attcatcgcc
     5641 attcacagtt atgagttcga tcccgtttag cgtggccgcg ccgcttcctc cagcattttt
     5701 cacatagacg gtagttgaac ccgaagtatt accctcaaca ataagtctgt ccgtagccga
     5761 tttatcatca cctaatacgg tgcggatatt aagctgacca ttattaccga cataattacc
     5821 ttttacggtt aatgtttttc cttgggtaaa tgtttgacca tcatcatacg aaagattgat
     5881 aatactgtct gaattagtca gatgggtaac aacggagtca tctttcatat tccagattgt
     5941 attttctgaa agcttcagcg tggttgtgcc gctaacgagt ttagtcgctc catttagaat
     6001 agagtcggac gaaattatgt ttaagtcacc tccagtatta ttaaccagaa c
//
LOCUS       DAJVUK010000202         6002 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.202, whole genome shotgun sequence.
ACCESSION   DAJVUK010000202 DAJVUK010000000
VERSION     DAJVUK010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6002
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.202"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..934
                     /locus_tag="OQQ57_003881"
                     /pseudo
     CDS             1..934
                     /locus_tag="OQQ57_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417591.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1322..1698)
                     /gene="rnpB"
                     /locus_tag="OQQ57_003882"
     ncRNA           complement(1322..1698)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="OQQ57_003882"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1731..2876)
                     /gene="garK"
                     /locus_tag="OQQ57_003883"
     CDS             complement(1731..2876)
                     /gene="garK"
                     /locus_tag="OQQ57_003883"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HCS1958451.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM
                     IVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTAL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(2973..3863)
                     /gene="garR"
                     /locus_tag="OQQ57_003884"
     CDS             complement(2973..3863)
                     /gene="garR"
                     /locus_tag="OQQ57_003884"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HCS1958452.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALACYYEKLAKVEVTR"
     gene            complement(3893..4663)
                     /gene="garL"
                     /locus_tag="OQQ57_003885"
     CDS             complement(3893..4663)
                     /gene="garL"
                     /locus_tag="OQQ57_003885"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HCS1958453.1"
                     /translation="MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWL
                     VLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVET
                     KEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN
                     VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP
                     VEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK"
     gene            complement(4679..5977)
                     /gene="garP"
                     /locus_tag="OQQ57_003886"
     CDS             complement(4679..5977)
                     /gene="garP"
                     /locus_tag="OQQ57_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005155249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GarP"
                     /protein_id="HCS1958454.1"
                     /translation="MHTRYLILLIIFIVTAVNYADCATLSIAGTEVAKELQLSTVSMG
                     YIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGIS
                     MFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLT
                     FAWGWEHVFTVMGVIGFVLTALWIKLIYNPTDHPRMSAEELKFISENGAVVDMDHKKP
                     GSAAASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKV
                     GLVASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNN
                     TTLVVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGY
                     LVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK"
BASE COUNT         1595 a         1610 c         1349 g         1448 t
ORIGIN      
        1 tgactcgttt cttcgtctgg attttttagg ttataacgcc caaattattc aacgatcgga
       61 caatacctgc gaacttacca ttaatgaacc gttaaaaaac caggaaatat ctacaggcaa
      121 tatcaatgct aattgtccat taaaagatat ttacaatgaa atcaggaggt tgaacgcaac
      181 ctttagttgt gggactggag atatagttga tctatcctct ctggacttac gtaatgtcga
      241 tttagattat tatgatttca cagataaaca tatggctaat actattctaa atccttttaa
      301 attggattca acaaatttta ctaatgccaa catgtttcag gttaattttg ttagttcaac
      361 acaaaacgcc acaatctcct gggattattt actaaaaata acgcctgttt taataagtat
      421 tagcgatatg tattctgaag aaaaaatcaa gtttgtcgaa agttgtttaa atgagcttgg
      481 agacattacc gaagaacaat taaaaattat gagatttgca attataaaat ctataccaag
      541 ggcaactctt acagataaat tagaaaatga attaacaaaa gaaatatata aaagctcatc
      601 gaaaatcaac aattgcttga acagaattaa attaccagag atgaaagaat tctcatcaag
      661 aaaaaacata tgattacatc gatataatca ttgaagatta tgaaaatatc aaagaaaatg
      721 cttatctggt cgtcccccaa attaattata ctatggattt aaacatagaa gactccagct
      781 cagaagagtt aataccctcg agaaagacga aaattcttcg gacaatggct ttgaagtcga
      841 agaatataac gcatatgaag catataactc agagaatcta tattttacca gagaggaata
      901 tacgtatgat tacgaccttt caaatgcaat atagacttaa taacttctta caaaatctat
      961 aattaatacc gtagatattc attcatctta ccctgtgcac caaaagcaaa aactcactga
     1021 cgcgggtttg aaactgatgg caaccgcaaa aatgcctgat gcgctacgct tatcaggcct
     1081 acgccatctc tgcaatatat tgaatttgcg tgcttttgta ggcaggataa ggcgttcacg
     1141 ccgcatccgg catgaataaa gcgcactcaa caatctgaaa cccgccggaa cggtttatta
     1201 cgtacatcag gtgaaactga ccgataagcc gctttctttt gggtatagtg tcgtggacag
     1261 tcattcatct ttctgcccct ccaaaagcaa aaacccgccg aagcgggttt ttacgtaaat
     1321 caggtgaaac tgaccgataa gccgggttct gtcgtggaca gtcattcatc taggccagca
     1381 atcgctcact ggctcaagca gcctacccgg gttcagtacg ggccgtacct tatgaacccc
     1441 tatttggcct tgctccgggt ggagtttacc gtgccacgga ctgttaccag ccgcgcggtg
     1501 cgctcttacc gcaccctttc acccttacct gatcccgctt gcgcgggcca tcggcggttt
     1561 gctctctgtt gcactggtcg tgggtttccc ccccaggcgt tacctggcac cctgccctat
     1621 ggagcccgga ctttcctccc ctccgcccgt ctcccccgaa gaggacgacg acgaagcggc
     1681 gactgtctgg tcagcttcgg cgcgcagtat agagggtttg cgcgcccttg tcaccccgcg
     1741 ttgcgcattc caatcgccag tgtcgcggcg atattacgtg aagcacggca gatattgtca
     1801 taagccccgc ggaatgcttc gtccaacgta cctatgctgg tcaatacgct gaagaccgca
     1861 tcaatgccat gctgatgtac aacgccaaca tcatcggtca ggctacccgc aatgccaatc
     1921 accggtttat ggtacttctt cgccacgttt gcgacaccaa tcggtacctt gccgtgaata
     1981 ctctggctgt caatacgccc ttcaccggtg atcaccagcg tacaatcgtg aatatgttct
     2041 tccagattca gcgccgtagt gacgatttca ataccacttt tcagttccgc accaagaaac
     2101 gccatcagcg ccgcgcccat accgcccgca gctcctgcgc cggggacatc tttcacatca
     2161 acatgcagcg cttttttaat gacctcggca tagtgagaga ggttattgtc cagctcaaca
     2221 atcatcgctt cactggctcc cttttgtggg ccaaagatgc gcgatgcgcc gttatcgccc
     2281 accagcggat tggtgacatc acaagcgacg cgaatgacgc aatcttttaa gcgcggatcg
     2341 aggccggaaa tatcaatatc attcagagta ttaagactac cgccgccaaa accaatttca
     2401 ttgccgttgg cgtcgcataa tttcgccccc agcgcctgta ccatgcctgc gccgccatca
     2461 tttgtagcgc tgccgccaat gccgataata atgtttgtcg caccgctctc cagcgcctgc
     2521 aggattaact cgcctgtgcc gcgtgaagtg gtcacgagtg gatcgcgttt ttccgcaggt
     2581 accagctcca gcccactggc cgccgccatt tcaataaacg cggttttgcc atcgccggag
     2641 atcccccaac tggcattcac tttctcgccc aacggccctg taacccaggc gtgacgttcg
     2701 gaaccctggg tggctgcaat catcgcttcc accgttcctt cgccaccgtc ggcaaccgga
     2761 acagaaacgt actgtgcatc aggaaaaatt tcccgaaatc ctttttctat cgcctgcgca
     2821 acctcgctgg cagataaact ttctttataa gagtctgggg cgattacgat tttcatacct
     2881 atgcctgtta ccacatgacg ccggagggcg tttctcttat tcggcgtgga ttccaggccc
     2941 ggattgcaat acgccatccg ggcacgacgt cattaacgag taacttcgac tttcgccagt
     3001 ttttcgtagt agcacgccag agcgctatga tccgccgttc ctaaaccatc tgcacgcagt
     3061 gcctgcatca tctccataac cgcagctgtg agcggcagtt gcgcgccgac gccgtgagaa
     3121 gtatccagcg cattcgccag atccttaata tgcagatcaa tgcggaagcc cggcttgaag
     3181 ttgcggtcca tcaccatcgg cgctttggca tccagcacgg tactgcccgc cagcccaccg
     3241 cgaattgcct gataaaccag gtctgggtta acgcccgctt tagttgccag cgttaacgct
     3301 tctgacatcg cagcaatatt cagcgccaca atgacctgat ttgccagttt ggtgacgtta
     3361 cctgcaccga tttccccggt atgcaccacg gaacccgcca tcgctttcat caaatcatag
     3421 tatttgtcga aaatagcctt gtcgccgccc accatcactg acagcgtacc gtcgatggct
     3481 ttcggttcac cgccgctcac cggagcatcc agcatatcaa tgcctttcgc tttcagcgct
     3541 tcgctgattt cacggcttgc cagcggtgcg atagaactca tatcgatcaa taccgtacct
     3601 ggcttcgcgc cttcaataat gccattctca cccagcgcca cctctttcac atgaggggag
     3661 tttggcagca tggttatgat gacgtcgcac tgttcagcga tcgctttagc cgtagacgct
     3721 gtttctgcac ctgcagcaat cacgtcagca atagcttctg ggttacggtc agcaaccacc
     3781 agcgagtaac ctgctttcag aaggttttta ctcattggtt tacccataat ccccaggcca
     3841 ataaaaccaa ctttcatagt catatcaatc atctctcttg ttgcggtggt ggttattttt
     3901 taaaggtatc agccagtttc tgagtggcag agcggaagac gccaagatcg ctgccgacag
     3961 ccacaaacgt cgcgccccat tccagataac gacgcgcatc ggcttcgacc ggcgcgagaa
     4021 taccgctggg tttgccgtgc gcactggcac ggttaaaaat atgctgaatt gctttttgta
     4081 catccggatg cgaggcattg ccgagatggc ccaatgccgc agccagatcg ctggggccga
     4141 cgaagatacc gtctacacct tcggtagcgg caatagcatc gacgttatct acgccctgct
     4201 gactttctat ctggaccaga atagtgatgt tcttgttcga ctgagcgaaa taatccgcca
     4261 cggtgccaaa catattggcg cggtgagaaa cggagacgcc gcgaatgcct tccggcgggt
     4321 aacgagttga tgccaccgcc tgctctgctt cctcttttgt ttctacaaaa ggaatcagga
     4381 aattatagaa accgatatcc agaagacgct taataattac cggctcgttg gtcggcactc
     4441 gcactactgg cgcgctggcg ctgcctttca gggccattaa ctgcggaata aacgtggaaa
     4501 tatcgtttgg cgcatgttcg ccatccagca ccagccagtc aaacccagcc aaaccaagaa
     4561 cttcagtgct aatcgggtta gagagtgctg accagcaacc aatttgtacc tgtttcgcag
     4621 ccagtgcggc tttgaattta ttcgggaaaa catcgttatt catcgcttat acctttgctt
     4681 atttctgcaa ttccatacgt ttaatgtcgc caactacgaa gaggtagcag accatcgcca
     4741 tcagcgctga acatcccacg aaaaccagtg ctgcattgaa ggagtgcagt tcacttacca
     4801 ggtagccaat caccagtgga gtgacaatgg aggcaacatt gccaaagacg ttaaagacgc
     4861 cgccacagag gccaacaatc tctttcggcg cggtgtcaga aatcaccggc cagcccagag
     4921 caccaaatcc tttgccaaaa aaagccagcg ccatcagcat gaccaccagc gtggtgttgt
     4981 tggtgtagtt acataagatg atggtggaag ccagcaacat tcccagcaca atcggtagct
     5041 tacgtgccag ggtcagggat aaaccgcgtt tgatcagata atccgagaag acacctccca
     5101 gcacgccgcc cgcaaaacca cacagtgccg gaatcgaggc gaccagaccc actttcagaa
     5161 tcgacatgcc tttttcctgc accagataaa tcgggaacca ggtgaggaag aaccaggtga
     5221 tggtgttgat aaaatattgt ccgaaaaata cgcccaacat catgcggtta gagagcaatt
     5281 gcttgatgta atgcagtttg ggaccgcttg ctgccgcgct gcccggcttt ttgtggtcca
     5341 tatcgaccac cgcgccattt tcagagataa acttcagctc ttccgcagac atacgtgggt
     5401 gatctgtcgg gttataaatc aacttgatcc acagcgccgt cagcacaaaa ccaatcaccc
     5461 ccataacggt gaagacgtgc tcccagcccc aggcgaaagt cagccagcca agcagaggcg
     5521 aaaagagcgc cagcgagaaa tattgcgccg agttaaagat ggcggaggca gtaccacgtt
     5581 ctttcgtcgg gaaccaggcg gcgacaatac gggcgttcgc cgggaatgat ggcgcttccg
     5641 agaagccgag cataaagcgc ataaagaaca tagagatccc tgcccaggcc agcgggaaca
     5701 tatcaacaaa gccttgcagg aaggtgaata gcgaccagaa aaagaggctg taggtgtaaa
     5761 cttttttcga gccaaactta tcaagcagcc agccgccggg aatttgcatc agcaggtagg
     5821 cccagccaaa agcggagaag atgtaaccca tcgaaaccgt acttaactgc aactcttttg
     5881 ccacttcggt accagcaata gacagcgttg cacaatcggc gtagttaacg gcggtaacaa
     5941 taaaaataat cagtaatatt aaatagcggg tatgcacgcc tttctttttt acgtcaacgg
     6001 tg
//
LOCUS       DAJVUK010000203         5801 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.203, whole genome shotgun sequence.
ACCESSION   DAJVUK010000203 DAJVUK010000000
VERSION     DAJVUK010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5801
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.203"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..840
                     /gene="pdeC"
                     /locus_tag="OQQ57_003887"
     CDS             <1..840
                     /gene="pdeC"
                     /locus_tag="OQQ57_003887"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HCS1958455.1"
                     /translation="GILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIID
                     IKTEKCIGAEALLRWPSEQEQVMNPAEFIPLAEKEGMIEQVTDYVIDNVFRDLGDYLA
                     THADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVEKMTPII
                     LAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIE
                     LAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELT
                     RGQ"
     gene            complement(843..1166)
                     /gene="soxS"
                     /locus_tag="OQQ57_003888"
     CDS             complement(843..1166)
                     /gene="soxS"
                     /locus_tag="OQQ57_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HCS1958456.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            1252..1716
                     /gene="soxR"
                     /locus_tag="OQQ57_003889"
     CDS             1252..1716
                     /gene="soxR"
                     /locus_tag="OQQ57_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HCS1958457.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYRRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            2262..3611
                     /gene="ghxP"
                     /locus_tag="OQQ57_003890"
                     /gene_synonym="yjcD"
     CDS             2262..3611
                     /gene="ghxP"
                     /locus_tag="OQQ57_003890"
                     /gene_synonym="yjcD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine/hypoxanthine transporter GhxP"
                     /protein_id="HCS1958458.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFGMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            3763..5412
                     /locus_tag="OQQ57_003891"
     CDS             3763..5412
                     /locus_tag="OQQ57_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HCS1958459.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(5566..>5801)
                     /locus_tag="OQQ57_003892"
     CDS             complement(5566..>5801)
                     /locus_tag="OQQ57_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HCS1958460.1"
                     /translation="MFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFF
                     EEDCTSHTGMSQTEDNINAVAMKITADIMQHAD"
BASE COUNT         1258 a         1371 c         1599 g         1573 t
ORIGIN      
        1 ggtattttgg ggagtcttgt tctgctatta ctctggctac gtattcgaca aaactatttg
       61 tctcccaaac gcaaattgca acgcgctcta gaaaaacatc aactttgtct ttattaccag
      121 ccaataatcg atatcaaaac agaaaaatgt atcggcgctg aagcgttgtt acgttggcct
      181 agtgagcagg agcaagtaat gaatccggca gagtttattc cgctggcaga aaaggagggg
      241 atgatagaac aggtaactga ttatgttatt gataatgtct tccgcgatct gggcgattac
      301 ctggcaacac atgcagatcg ctatgtttct attaacctgt cggcctccga ttttcatacg
      361 tcacggttga tagcgcgaat caatcagaaa acagagcaat acgcggtgcg tccgcagcaa
      421 attaaatttg aagtgactga gcatgcattt cttgatgtcg aaaaaatgac gccgattatt
      481 ctggctttcc gccaggctgg ttacgaagtg gcaattgatg attttggtat tggctactct
      541 aacttgcata accttaaatc attgaatgtc gatattttga aaatcgataa atcgtttgtt
      601 gaaacgctga ccacccacaa aaccagtcat ttgattgcgg aacacatcat cgagctggcg
      661 cacagcctgg ggttaaaaac gatcgctgaa ggcgtcgaaa ctgaggagca ggttaactgg
      721 ctgcgcaaac gcggcgtgcg ctattgccag ggatggtttt ttgcgaaggc gatgccgccg
      781 caggtgttta tgcaatggat ggagcaatta cccgcgcggg agttaacgcg cgggcaataa
      841 aactacaggc ggtggcgata atcgctggga gtgcgatcaa actgccgacg gaaaacgcgg
      901 gagaaggtct gctgcgagac ataacccagg tccattgcga tatcaaaaat cggacgctcg
      961 gtggtgcgca actcaacggc ggccagtaac aggcgacgtt ggcgaatgta atcgccaagc
     1021 gtctgatgcg tcaccgtgcg gaacattcgt tgcaagtacc actttgaata gcctgatttt
     1081 tttgcgacta catcaatgtt aagcggctgg tcaatatgct cgtcaatcca tgcgataaga
     1141 tcctgaataa ttttctgatg ggacataaat ctgcctcttt tcagtgttca gttcgttaat
     1201 tcatctgttg gggagtataa ttcctcaagt taacttgagg taaagcgatt tatggaaaag
     1261 aaattacccc gcattaaagc gctgctaacc cccggcgaag tggcgaaacg cagcggtgtg
     1321 gcggtatcgg cgctgcattt ctatgaaagt aaagggttga ttaccagtat ccgtaacagc
     1381 ggcaatcagc ggcgatatag acgtgatgtg ttgcgatatg ttgcaattat caaaattgct
     1441 cagcgtattg gcattccgct ggcgaccatt ggtgaagcgt ttggcgtgtt gccagaaggg
     1501 catacgttaa gtgcgaaaga gtggaaacag ctttcgtccc aatggcgaga agagttggat
     1561 cggcgcattc ataccttagt ggcgctgcgt gacgaactgg acggatgtat tggttgtggc
     1621 tgcctttcgc gcagtgattg cccgttgcgt aacccgggcg accgcttagg agaagaaggt
     1681 accggcgcac gcttgctgga agatgaacaa aactaaagcg ccacaagggc gctttagttt
     1741 gttttccggt ctttgtcttt ctctctatcc cgctggtaca caggagggtt tcccccgacg
     1801 tcaacacacc tcattcgagc acgtggtgga ggttccggtt ggtgttgatg ctttaattgt
     1861 atgtcaccga cgtttcttcg ccagtgtaaa agtatacttt ttaaccgcaa tatttttgtc
     1921 atctcagacg attttttatc gcaatcctga acggtatacg gctcgataac gctgcaatct
     1981 tgcgcaccga cgataacgtt tgcgcatcaa ttgcctgttt tttcatcgtc aagacaataa
     2041 aagagaaaaa agcagcaaac ttcggttgaa aaagccgcta tgatcgccgg ataatcgttt
     2101 gcttttttta ccacccgttt tgtatgcgcg gagctaaacg tttgcttttt tgcgacgcag
     2161 taaattgtcg caaacctgga gcaggaagat aacgtttcgc tggcagggga ttgtccgcca
     2221 cgcatcttga cgaaaattaa actctcaggg gatgttttct tatgtctacg ccatcagcgc
     2281 gtaccggcgg ttcactcgac gcctggttta aaatttcaca acgtggaagc actgtccgtc
     2341 aggaagtggt tgccgggtta acaacgtttc tggcgatggt ctactcggtc atcgtcgttc
     2401 caggtatgtt gggtaaagca ggcttcccgc ctgcggcagt tttcgttgca acctgtctgg
     2461 ttgccggact cggttctatc gtgatgggtc tgtgggctaa tctgccgttg gcgattggtt
     2521 gcgccatctc cctgacggcg tttaccgcat tcagcctggt gctggggcaa catattagcg
     2581 tacctgtcgc gctgggtgcc gtgttcctga tgggtgtgct gtttacggta atttctgcca
     2641 cgggtatccg tagctggatt ttgcgcaact tgccgcacgg tgtggcgcac ggcacgggga
     2701 tcggtatcgg tctgttcctg ctgctcattg ccgctaatgg tgttggtctg gtgattaaaa
     2761 acccgcttga tggtctgccc gttgcgctgg gtgatttcgc gaccttcccg gtgattatgt
     2821 cactggtagg tctggcggtg atcatcggcc tggaaaaact gaaagtccct ggtggcattc
     2881 tgctgaccat tatcggtatc tcaattgtcg gtttgatctt cgatcctaac gtccatttct
     2941 ccggcgtttt cggcatgcct tcattgagcg atgaaaacgg caattcactg attggcagcc
     3001 tggacattat gggcgcgctg aatcctgtag tcctgccaag cgttctggcg ctggtgatga
     3061 cggcagtatt tgatgccacc ggaactatcc gtgccgtcgc cggccaggcg aacctgctgg
     3121 ataaagatgg gcagatcatc gacggtggga aagcactgac cactgactcc atgagcagcg
     3181 ttttctctgg cctggtgggt gctgctccgg cagcggtata catcgagtct gcggcgggta
     3241 cggcggcggg cggtaaaacc ggtttgacgg ctatcaccgt tggcgtgctg ttcctgctga
     3301 ttctgttcct ctctccgctc tcttacctcg ttccggggta tgcaacggct ccggcgctga
     3361 tgtacgttgg cctgctgatg ctgagcaacg tggcgaaaat cgactttgct gattttgttg
     3421 atgcgatggc gggtctggtt acggcggtat tcatcgtgct gacctgtaac atcgtaacag
     3481 gcatcatgat cggcttcgcg actctggtga ttggtcgtct ggtttccggc gaatggcgca
     3541 agttgaacat cggtacggtc gttatcgccg tggcgctggt gaccttctat gcgggtggct
     3601 gggctatcta atctttcatc ggattctgaa aacgggtggc aatggctgcc cgtttttatt
     3661 ttctccgcac attgtgtgag cttttgcgat attctgaaaa aatgagaatt caggcataac
     3721 gcctttctca gatcataaaa aaacatcgca aacagggaac gcatggaaat cttcttcacc
     3781 atactgataa tgaccctcgt ggtctcgctg tccggggtgg tcactcgtgt catgcccttt
     3841 cagatcccgc ttccgcttat gcaaatcgcc atcggtgcgc tactggcgtg gccgacgttt
     3901 ggtttgcatg tggagtttga tcctgaactc tttttagtct tgtttatccc gccgttgctg
     3961 ttcgctgatg gctggaaaac gccgacccgt gaatttctcg aacatggtcg agagattttc
     4021 ggcctcgcgc tggcgctggt ggtggtcacc gtggtcggca ttggcttcct tatttactgg
     4081 gtggtgccgg gcattccgct gatccccgcc tttgcgctgg cggcggtact ttctccgacc
     4141 gatgctgtgg cgctctccgg aattgttggc gaagggcgca tcccgaaaaa aatcatgggc
     4201 attttgcagg gcgaagcgtt gatgaatgac gcctccggcc tggtgtcgtt gaagtttgcc
     4261 gtggcagtgg cgatggggac gatgatcttc accgtcggcg gtgcgacggt cgaatttatg
     4321 aaagtagcca ttggtggtat tcttgccggt tttgtggtga gctggctgta tggtcgctcg
     4381 ctgcgattcc tcagccgctg gggcggtgat gaacccgcga cgcagatcgt tctgctgttc
     4441 ttgctgccat tcgcttctta tctgattgcc gaacatattg gcgtttccgg catcctcgct
     4501 gcggttgccg ccgggatgac catcacccgc tccggtgtga tgcgccgtgc gccgctggca
     4561 atgcgcctgc gcgcaaacag cacctgggcg atgctggaat ttgtctttaa cggcatggtg
     4621 ttcctgctgt taggtctgca gctgccgggt attctggaga cgtcgctgat ggcggcagaa
     4681 atcgacccta acgtcgaaat ctggatgctg tttaccgata ttattctgat atatgcggcg
     4741 ctgatgctgg tccgtttcgg ctggctgtgg acgatgaaaa agttcagcaa ccgcttcctg
     4801 aagaagaagc cgatggagtt tggttcgtgg accacacgag aaatcctgat cgcgtctttc
     4861 gccggggtgc gtggggcgat cactctggcc ggtgtgctct ctatcccgct gctcttgccg
     4921 gatggtaacg tcttcccggc gcgctatgag ctggtgttcc tggcggctgg cgtcattctc
     4981 ttctcgctgt ttgtcggtgt ggtgatgttg cctattctgc tacaacacat tgaagtcgcg
     5041 gatcattcgc aacaattgaa agaggaacgt attgcgcgag cggcaacggc agaagtggcg
     5101 attgtggcga tccagaaaat ggaggagcgt ctggcggcgg ataccgaaga gaatatcgat
     5161 aaccagctgc ttacggaggt cagttctcgc gtcattggta acctgcgtcg tcgcgccgat
     5221 ggacgtaacg acgttgaaag ttccgtgcag gaagagaacc ttgagcgtcg cttccgtctg
     5281 gcggcattgc gttctgaacg tgctgaactg taccacctgc gcgccacgcg ggagatcagc
     5341 aacgaaacgc tgcaaaaatt actgcacgat ctcgatttgc ttgaagcgtt gctaattgag
     5401 gaaaatcagt aagccgaaag cgacgtaacc aggcccgagg taatctgaaa aaggtgcaat
     5461 cttttgcacc tttaacaggt tagctcgggc taacattcat gattctaaaa caaataagtt
     5521 atctctcttg taaagtcaat tcattggctg ttcttcgact taacctcaat ctgcgtgttg
     5581 cataatatct gcagtaatct tcatagcgac tgcattaata ttatcctcag tttgtgacat
     5641 gccagtatga gaggtacaat cttcttcaaa gaatttctgt agtgttacca gggtatcact
     5701 atcaatgggg atattttcct ctccacggag tatggaaatg cccattccct ggacgctagc
     5761 ctcatcaaaa ttaacccgat agagacgggt attaaacata c
//
LOCUS       DAJVUK010000204         5794 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.204, whole genome shotgun sequence.
ACCESSION   DAJVUK010000204 DAJVUK010000000
VERSION     DAJVUK010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5794
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.204"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(137..2056)
                     /gene="dhaR"
                     /locus_tag="OQQ57_003893"
     CDS             complement(137..2056)
                     /gene="dhaR"
                     /locus_tag="OQQ57_003893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415719.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
                     /protein_id="HCS1958461.1"
                     /translation="MSGAFNNDGRGISPLIATSWERCNKLMKRETWSVPHQAQGVTFA
                     SIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGF
                     HDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGT
                     IALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVIS
                     WDEQGNLQFINAQAARVLRLEATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFE
                     SQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQT
                     RRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAAL
                     AEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDA
                     RRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNN
                     KLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPE
                     HLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRK
                     MKQHGIDAGQFKRRV"
     gene            2284..3393
                     /gene="dhaK"
                     /locus_tag="OQQ57_003894"
     CDS             2284..3393
                     /gene="dhaK"
                     /locus_tag="OQQ57_003894"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HCS1958462.1"
                     /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRSFSSLDQTVDEMFDTLLGNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWDKLGESNVTEQNSNC"
     gene            3365..3997
                     /gene="dhaL"
                     /locus_tag="OQQ57_003895"
     CDS             3365..3997
                     /gene="dhaL"
                     /locus_tag="OQQ57_003895"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HCS1958463.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            4008..5426
                     /gene="dhaM"
                     /locus_tag="OQQ57_003896"
     CDS             4008..5426
                     /gene="dhaM"
                     /locus_tag="OQQ57_003896"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HCS1958464.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTL
                     TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDYIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKTQRFNRQG"
BASE COUNT         1460 a         1475 c         1428 g         1431 t
ORIGIN      
        1 gaagcaagtc aacggaggat atcgcttcag cttttaagtg cgtgatagac aagcccttaa
       61 acgatgctga aaaatgttag cgtgcgccgg aatgaaatat agatcactct gatgtattag
      121 aaatcgtttc tgtctttcat acccggcgct taaactgccc tgcatcaatg ccatgttgct
      181 tcattttccg ccacagcgta gtgcggccga ttccaagtaa agccgacatt tcctgaatgc
      241 gaccgcctgt gacctgggct gcgttaataa ttgcctcttt ttcaacttcc gcaaatgaca
      301 gactggtgga aaggcgggtg gcgctgacat catctgttgc ctgctcggta aacagatgtt
      361 ccggcaaatc actgacgcga atgcgcccat tatcactact cagagcaaga ttctcgatga
      421 cgctgtaaag ttcaaaatcg ttgcctggcc atgcacaaga aaccaggcga gcgagggcat
      481 cgtcatcaat tttcagccgc gtagagaagc gtttttcaag actgcgtaat ttgttattca
      541 ccagcgccgg aatgctgcca cgccgcatac gcagaggcgg gatggtaatt tcaaatgcat
      601 gcagcgcgta atacagctgg cgactaaaac gattttgttc caccagcatt gcgaggtccg
      661 cggtcgttgt tgcaatcact ttgacatcaa ttggtattaa acgccgcgca tccagtcgcg
      721 tgataacacc ctgcttgata acctgaagca aagcagactg taactccacc gccagatatt
      781 caatcttttc aagaaacagc gtgccgccgt gcgccagttc cagccgactc agacggccat
      841 tttcattgtc cgtacgatcg ccaccaataa attcttccgc cagtgccgca tcaccatata
      901 actcacaatt gacggcgata taaggacctg cagcacgctc gctttcatta tgaattgcct
      961 gacttagcag tgccttgccc acgccctctt ctccacaaag caggacagga aagctactgc
     1021 gcgccgcctg gcgaccaaaa tgaatcaagc ggcgggtttg cggatcgtcc tgtggcatat
     1081 gagcaaaggt atggctgact tttcctaatt gactggtcat caactgccgc atctgttcca
     1141 caggatggag caacaaaata aagctggttc cctgcgtttc tattatcggt ttaagggtta
     1201 tcaccgcatc aataaactga tgctgacttt caaaggttgc ttctacgtgt ttgagcggat
     1261 gtgcctgttt tattgcttgt tgcaatacgg cgggtaacgt taagagttca gtgattgccc
     1321 gtccctgact tgccgtcgct tcaaggcgca agacccgcgc cgcctgggca ttgataaatt
     1381 gcaaattacc ctgctcgtcc cagctaatca cgccatcatc catactttct aacagggcat
     1441 taagttgatt taaatgacgg ttagtttcag cgagcaaact gtccgtcagc agtaaatttc
     1501 cgacctcgcg ggcgattgcc aacgtcaacg gcaaatcagc tgcggtagtt tgctcaaccg
     1561 gacacgccag cgctattgtt cccgtcaatc ggcccttgct gtcaaacaac ggcgttgcac
     1621 aaaaggccca gttccagagt gcctgtttga aatgttgatc ggccatcgtt ttcacggcct
     1681 gaccagagat agccgctaac gatagcgcac aagtaccaat aattccctcg gcgcaatacg
     1741 tgccgtcatg gaatccaagt gcacttagct gctgcaaggt ttgcggatcg ccattacggc
     1801 tgagaatgca ggcggtttca tcgaggataa acagcgcaca ctctcgcggt gccatatatt
     1861 cccaggcatc ttccagcgca gcctgcccga gcgtcagcat cgctttctta cgccgataaa
     1921 tagaagcaaa tgtcacgccc tgggcctgat gtggtacgct ccatgtctcc cgtttcatca
     1981 gcttattgca tcgctcccag gaggttgcaa ttaagggaga tatgccccga ccatcgttgt
     2041 taaaagcgcc actcatatcc cgcatccctt atgacaaaag gtgttccggc tcgcaatttt
     2101 aagtattaat acacgtaaaa gtttcaatat ggaacattca ttaaagcata tgtttcacta
     2161 tgaaacataa tttgggctaa ttttcttttc ccttgcctga tgcacaatgg attcatcggc
     2221 agtcagtggt cgccgtgtcg ttgaacatca tccatgccct accgtaattg ctggagcaaa
     2281 ataatgaaaa aattgatcaa tgatgtgcaa gacgtactgg acgaacaact ggcaggactg
     2341 gcgaaagcgc atccatcgct gacattgcat caggatccgg tgtatgtcac ccgagctgat
     2401 gcccctgttg caggaaaagt cgccctgctg tcgggtggcg gcagcggaca cgagccgatg
     2461 cactgtgggt atatcggtca ggggatgctt tcgggggcct gtccgggcga aattttcacc
     2521 tcaccgacgc ccgataaaat ctttgaatgc gccatgcaag ttgatggcgg cgaaggtgta
     2581 ctgttgatta tcaaaaatta caccggcgat attcttaact ttgaaacagc gaccgagtta
     2641 ctgcacgata gcggcgtaaa agtgaccact gtggtcattg atgacgacgt tgcggtaaaa
     2701 gacagtcttt atactgccgg gcgacgcggc gttgccaaca ccgtattaat tgaaaaactc
     2761 gtaggcgcag cggcggagcg tggcgactca ctggacgcct gtgcggaact ggggcgtaag
     2821 ttgaataatc aaggccactc aataggtatc gctctcggtg cctgtaccgt tcctgccgcg
     2881 ggcaaacctt cttttaccct ggcggataat gagatggagt ttggcgtcgg cattcatggt
     2941 gagccgggta ttgaccgccg ctccttctct tcccttgatc aaaccgtcga tgaaatgttc
     3001 gacaccctgc tgggaaatgg ctcataccat cgcactttac gtttctggga ttatcaacaa
     3061 ggcagttggc aggaagaaca acaaaccaaa caaccgctcc agtctggcga tcgggtgatt
     3121 gcgctggtta acaatcttgg cgcaactccg ctttctgagc tgtacggcgt ctataaccgc
     3181 ctgaccacac gttgccagca agcgggattg actatcgaac gtaatttaat tggcgcgtac
     3241 tgtacctcac tggatatgac cggtttctca atcaccttac tgaaagttga tgacgaaacg
     3301 ctggcactct gggacgcccc ggtccacacc ccggccctta actgggataa attaggagaa
     3361 agcaatgtca ctgagcagaa ctcaaattgt taactggctc actcgttgtg gcgatatttt
     3421 cagcaccgag agcgagtatc ttaccggact ggatcgcgaa attggcgacg ctgaccacgg
     3481 gctaaatatg aaccgaggct ttagcaaagt ggtggaaaaa ctccctgcta tcgcagataa
     3541 agatatcggt ttcattctca agaataccgg tatgacgctg ctttccagcg tcggtggtgc
     3601 cagtggtccg ctgttcggta ccttctttat ccgcgccgca caggcgaccc aggcacggca
     3661 aagcctgaca ctggaagagc tttatcagat gttccgcgat ggcgcggacg gcgtaatcag
     3721 tcgcgggaaa gccgaacctg gcgataaaac catgtgtgat gtgtgggtgc cggtggtgga
     3781 atcgttacgt cagtccagcg agcaaaatct ctctgttccg gtggcgctcg aagctgccag
     3841 tagcatcgcc gaatccgctg cacaaagtac gattacgatg caagcccgca aaggccgcgc
     3901 cagttatctc ggtgaacgca gtattggtca ccaggatccc ggcgcgacct cggtgatgtt
     3961 tatgatgcaa atgttggcgt tagccgcaaa agagtaagga attggtgatg gtaaacctgg
     4021 tcatagtttc acatagcagc cgactgggag aaggtgtcgg tgaattagcc cgtcagatgt
     4081 taatgagtga tagttgtaaa atcgccattg ccgcgggaat tgacgatcca caaaatccta
     4141 ttggtaccga tgccgtcaaa gtgatggagg ccatcgaatc tgttgctgat gccgaccatg
     4201 tgctggtcat gatggatatg ggtagcgcat tattgagtgc tgaaactgcg ctggaattgc
     4261 tggctcccaa gatcgccgca aaagtacgtt tgtgtgctgc gccgttggtc gaaggtacac
     4321 tggcagcaac ggtcagcgcg gcctcgggag cggatatcga caaagttatc tttgacgcta
     4381 tgcatgcgct ggaagccaaa cgtgaacaac tgggtttacc gtcctccgac actgaaatct
     4441 ctgacacatg tcctgcgtac gatgaagaag cccgttctct ggcggtggtc ataaaaaacc
     4501 gtaacggcct gcatgtacgt ccggcctccc ggctggttta taccttatcg acatttaatg
     4561 ccgatatgtt gctggaaaaa aacggcaaat gcgtcacacc agagagtatt aaccagattg
     4621 cgttactaca agttcgctat aacgatacgc tgcgcctgat tgcgaaaggg ccagaagctg
     4681 aagaggcact gatcgctttc cgtcagctgg ctgaagataa ctttggtgaa acggaggaag
     4741 tcgctccacc tactctgcgt cccgttccgc ctgtttcggg taaagccttt tattatcaac
     4801 cagttttata tacggtacag gcaaaatcaa ccctgaccgt ggaagaagaa caagatcgat
     4861 tacgccaggc tattgacttc acgttattag atctgatgac gttaacagcg aaagcagaag
     4921 ccagcgggct tgactatatt gccgcaatct tttctggtca ccatacactg ttagatgatc
     4981 cggaactgct ggcggcggca agcgaactcc ttcagcatga acattgcacg gcagaatatg
     5041 cctggcagca agttcttaaa gaacttagcc agcaatacca gcaactggat gatgaatatc
     5101 tacaagctcg ctatattgat gtggacgatc ttctgcatcg caccctggtc cacctgaccc
     5161 aaacgaaaga agaactcccg cagtttaact cgccaactat tctactggcg gagaacattt
     5221 atccttccac agtactgcaa ctggatccgg cggttgtaaa aggtatctgc cttagcgccg
     5281 gaagtccggt atcccacagc gccctaatcg cccgtgaact ggggattggc tggatttgcc
     5341 agcagggtga gaaactgtat gcgatacaac cagaagaaac gctaacgctg gacgttaaaa
     5401 cgcaacgttt caaccgtcag ggttaagcca ctgttcggat ggcatcgttc tgatgtcatc
     5461 cggcaattta ctcagcacta atggttttta actacctgtt atatttttca ccaatttatg
     5521 atgatttttc ttcgctaatc acgaacccaa cgccgctggc tggctaataa acagacgtta
     5581 tttgatcact ctatttcgcc gttatttatc cctttaattc ccttttctaa aatgcctgac
     5641 agttcgcaga atgagatttc gatcatgcag ctagtgcgat cctgaactaa ggttttctga
     5701 tacttgaata ccgttttatt cggtttcgcc aaaggagaat gattgatgaa atcccccgca
     5761 ccttctcgcc cgcaaaaaat ggcgttaatt ccag
//
LOCUS       DAJVUK010000205         5756 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.205, whole genome shotgun sequence.
ACCESSION   DAJVUK010000205 DAJVUK010000000
VERSION     DAJVUK010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5756
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.205"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(625..2334)
                     /locus_tag="OQQ57_003897"
     CDS             complement(625..2334)
                     /locus_tag="OQQ57_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858142.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HCS1958465.1"
                     /translation="MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSEL
                     IQFKNKTAPYFSEKRNVKVNINGVAKDIYGRQIVCRHLASYWEMNFMETNGKVNYQLL
                     STPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVITNFFYNMKKNGDFVRTLSACT
                     LNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLSAKDFFDDF
                     YWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEK
                     YKNGEISQSKLVNLLATRSSDGTPAFYIALQNGCSDIIQVYGKILNMCNLSQETILTL
                     LAAVGANNVPGLCMSFMNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFF
                     ALQNGHADSIRMFGSLLNKKMLSSEQIKELLKVKHGLFMALQNGHTKAIMAYGDILKI
                     LPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCNILKNYSFTTRRLVEMLSA
                     TNKDGIPGVFVSVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIEIINRFN
                     HFL"
     gene            complement(2766..3485)
                     /locus_tag="OQQ57_003898"
     CDS             complement(2766..3485)
                     /locus_tag="OQQ57_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector
                     phosphothreonine lyase"
                     /protein_id="HCS1958466.1"
                     /translation="MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIR
                     QYPAYYFKVASNVPTYSDICQFFSVMYQGFQIVNHSGDVFIHACRENPQSKGDFVGDK
                     FHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNRVSQQSRVGIGAQFTLYVKSD
                     QECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSYRNELRSDR
                     DGSERQEQMLREEPFYRLMIE"
     gene            complement(3610..4173)
                     /locus_tag="OQQ57_003899"
                     /pseudo
     CDS             complement(3610..4173)
                     /locus_tag="OQQ57_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4157..4415
                     /locus_tag="OQQ57_003900"
                     /pseudo
     CDS             4157..4415
                     /locus_tag="OQQ57_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(4524..5102)
                     /locus_tag="OQQ57_003901"
     CDS             complement(4524..5102)
                     /locus_tag="OQQ57_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958467.1"
                     /translation="MKVSFKSLGYIFHDIYNKKHTIDEFNDVVRKAVLSGKINELNAC
                     HKVAIFLAEKDNEITKKDKAKIIDTLTENYSIEFQQLMNISERTLNSSLYITPGESGF
                     VSFVNREGKICHTAYVKSSDNSMAYYHANYSSIDKYITDMCGLICMRHIESTCIIFYM
                     LDEKVLSAIAEFMNEKGWRAAFCSAKNLYKCV"
     gene            complement(5523..5756)
                     /locus_tag="OQQ57_003902"
                     /pseudo
     CDS             complement(5523..5756)
                     /locus_tag="OQQ57_003902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000544830.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
BASE COUNT         1608 a         1251 c         1040 g         1857 t
ORIGIN      
        1 ataagcttga tacaactggt ctggtatata cagtttcttt gagtgcggtt acgtccacag
       61 aggtaacggt aaaagtaacc ccttgtcggg accactccga ccgcgcacag aggcattttc
      121 atcgctgaca ggccgcattg cctcgcaggg ctggaggagg atcggtgata tccggacgac
      181 cgtaccggct tacgccgggc ttcggcggtt ttactcctct gccatgtgca acaacggagt
      241 gccgccttac atgccgctgg cgcggcatat cctggtaaca tttttgttga taccaccttc
      301 cggccttatc ctgaccagtg ggctttcctg gcatcgatga taccgatgaa cgcgcatgat
      361 attgagccga cgatattacg ggcaactgga aatactcacc ctctggatgt gacctttatc
      421 catgaagaag atttggccat accatggaaa cctgaacaat catcagttta cgcccatgta
      481 aacccctacg ggatatttga actcgatatg gaaacaaggt tgccaatcga ggtggttgcc
      541 tgaaagttgg cagttacccg gtcactacac cttgttggag tgaacatatc aaaaacaggt
      601 agttacacaa tttaaattac agtctcataa aaaatgatta aatctattta ttatttcaat
      661 aaacgttttt ttcatcttct ttgaaaattg ttctgctata gtatccggtt ccagattgtt
      721 ctcttttatt attctacaat actctaatat tgtttctttg tctctattta ctacagatac
      781 aaatacacca ggaataccat ctttattagt tgcggacagc atttcgacca atcgtcttgt
      841 ggtaaaacta tagtttttta gaatattaca aaaggcacgt attgtttcgg tatggccatt
      901 ataaaatgcc ataaaaagtc ctgatgtacc gttgggattt tttatccata ataattcatc
      961 tatatattcc tggtgagggg ggagtatttt tagtatatct ccatacgcca taatggcctt
     1021 tgtgtgccca ttttgaagtg ccataaacaa cccatgcttt actttcaata attctttaat
     1081 ttgttcacta ctaagcattt tcttattaag cagacttccg aacatacgaa tactatctgc
     1141 atgtccattc tgcaatgcaa aaaataaccc aggtaaatca tggctgtctt tcgcagctaa
     1201 tagatataat ctcttatcgg aagttaacgg ggttttaaag actatttccc cataggcttt
     1261 tattgtgtct acatgtccgt tcataaaaga catgcataaa cccggcacat tgtttgcccc
     1321 taccgcagca agcaatgtaa gtattgtttc ttgactaaga ttgcacatat ttaatatctt
     1381 accatatact tgaataatgt ctgaacatcc gttttgaagt gctatataaa atgcaggagt
     1441 accatcagag cttctcgtgg ccagaaggtt caccagttta gattgagaaa tttcaccatt
     1501 tttgtatttt tccatcagta taaataatac ttctgtcaga ttctttgtta tcgcatgata
     1561 tataactctg gaattgatca attcatctgg taaaagtttc actgtgtttg ttagagggga
     1621 attatgccta tcttcaaata ttacctgccc gggttgctcc agaccataaa ttttccaata
     1681 aaaatcatca aaaaaatcct tagcggataa ttgactcagt tcgaaatggc tatcacaagt
     1741 aaatacagta cgtttatgag taacagttcg attaggatcg aaaaactgaa caacccattt
     1801 ttcactttct tgtacgcgct ttattttcaa ccctaacgcc atttggtggt ttaatgtgca
     1861 tgctgataat gttctgacaa agtctccatt ttttttcatg ttataaaaaa aattagtaat
     1921 aactgttccc cactttttat tttccacaaa ataaatataa gctggtgatt ttgaaaaatc
     1981 ttccgttttt tccaaacata cattttttgc aatagcatca ggggtgctaa gaagctgata
     2041 gtttaccttc ccatttgttt ccataaaatt catttcccaa taggaagcta ggtgacggca
     2101 aactatttgt cttccatata tatcttttgc cactccattt atatttacct tcacatttct
     2161 cttttctgaa aaataaggtg ctgttttatt cttaaactga attagttcac tggagtttga
     2221 gaccctcata atagaacttg ttattgttct attatctctg ttaacagaca tatctgttga
     2281 taacgaattt tttgttgaaa atatactaga tgaaaatgtt ttatttaacg gcatagaaga
     2341 caaccataga gatgttataa tactattaga ttgcagttac taatagtaaa agcctcctta
     2401 caaggaggta gcttattcag aatgctccta taagatagcg agctcgtcaa cgatacagat
     2461 gatctgatta tattgtgcaa aaggagaaca ggaaaatagg cactggaaaa gatgaaggcc
     2521 tgatgggagc attaactaat gcaaaatccg acaggttaat atcccgaaaa gcaatcaaac
     2581 gactcaaaca ggagatgcac gctgaagtgg tggacaactg ttcggatttc agatgagtag
     2641 ctcagcagtt tatgagccga atgctctgtc acggtcagga atcaggctgc atacgctgtg
     2701 ccaaatctaa tcgtagttat tctaaccagt tttccagcta caaggtggtg tagctggcat
     2761 cttctctact ctatcatcaa acgataaaat ggttcctctc gtaacatttg ctcttgcctt
     2821 tcacttccat ctcgatcgct tcgtagttca ttacgatagc tgacatattt ccagtcttca
     2881 ggtctaacat ctgacgccgg atactccccg ggagcgattt tgcttcttaa tagattagac
     2941 tcgagacaca ttataaattg tcgtatttta tgaagtaata aagcactata ttgcgagcat
     3001 tcctgatctg attttacata tagcgtaaac tgagctccta tccccacacg agattgctga
     3061 gaaactcgat tcatatcagt tatcttccat ttatctatag gactgtcctc tgaaaataat
     3121 aaaccagaca aaatttggaa tgccagagga acttgctccc tagctatact aatatgaaac
     3181 ttgtccccaa caaaatcccc cttactctga ggattttcac gacatgcatg aataaacaca
     3241 tctccactat ggttcacaat ctggaatcct tggtacatga cagaaaaaaa ttgacatata
     3301 tcagagtaag ttggcacgtt cgatgctact ttgaaatagt acgctgggta ttgccgtatt
     3361 tggttgtaca atatattgaa gttatttttc aatctttcat tcgcagaaag catctgcggt
     3421 atttcagacc tcacaacatt caaagaatct aaatttagtt ttagacaggg cttttttatg
     3481 ggcatagaaa acgtcctcta taaaatagat atattatctt atattgattg tttatcatct
     3541 tttataaaac gatacattat atgtaatgta tgtaagcgta agggtcttct ccgatcatgg
     3601 tgggaaggct tagaacgcca tattcagttt cccatagtgg aacatcactc ccagcttaaa
     3661 gcgctcccgg ttgcggtagc ccttggcttt tattctcagc agcctgatct tgctgttcag
     3721 tgcttccgca tttccgtttg atacgccatg gcgcatggcg ttcaggatac cgtacaacct
     3781 tttccctatc gttttagcca cattcttcat catggggacg tcactgttgg ccgccagaga
     3841 cagccatctc tgccagtcgt tgcgtctttc ctcgctccat ggtctgctcc agatatcctt
     3901 tgccagttct ttcagcgccc agcacaggct cgtcagcttc atctgcgcac gcagccatat
     3961 cagcttttcc tgcctggatt cggtcatcca tttatcgctg tgctgccaca ggaagcgagt
     4021 tccctttgcc tgacgacgac tttcaacagg aagatgcgga tgttcattct ggcgggtttt
     4081 atccaccacc tcacccggtt gtttcgccac atgaaagcga tcgaaggcta ttttctcaac
     4141 cgcattgggt aagtggatgc gcgctgctct tagtttgctg agccagttta gcattgcctt
     4201 ctacatgacc gatgcctgag ccggtatacc gaactttatt gtcctcaacc agtcatgtta
     4261 taagcaagaa atgcactcag cggatagagc gacataatct gaacctgcgg acacatctta
     4321 agcggcttac ccgcaaaacc atatgcttct caaagtctga tgatatgcac tataagatca
     4381 tcggctggta tctgacaatc aaccaccacc actaaatctg cgtcacgacc tgcaactgag
     4441 tctggttgaa caggctgagg ccctgctgaa gcaacgcgaa cctctcgact cttgttggat
     4501 tttaccaaat agtttttcta aaattaaaca catttatata agttctttgc tgaacaaaac
     4561 gcagcccgcc atcctttttc attcataaat tcagcaatgg cagataaaac tttttcatca
     4621 agcatataaa aaataatgca agtagactca atatgcctca tacaaataag gccgcacata
     4681 tccgtaatat atttgtcaat gctgctataa tttgcatggt aatatgccat gctattatct
     4741 gatgatttta catatgcagt atgacatatt tttccttcac gattaacaaa actgacaaaa
     4801 ccactttcac caggagtaat atataaagat gaatttaacg tgcgctcact aatattcatt
     4861 aattgttgaa attcaatgga atagttttca gttaatgtat ctattatctt ggctttgtct
     4921 ttctttgtta tctcattgtc tttttcggca agaaaaattg ccactttatg acatgcattc
     4981 agctcgttaa ttttacctga taaaactgct tttcttacca catcgttgaa ctcatcgata
     5041 gtgtgttttt tattatatat atcatgaaaa atatagccta aagacttaaa cgagactttc
     5101 attttatatt ctccttaaat attaacagga tatatatatc acattttcct ctatattttc
     5161 agaaaccagc tatcattttc cccattactg gtacgtcgct tcagatattt ccgcagcaag
     5221 cgataaccct gcgcactatg aggatgccat tcattataat gtttgaacac cttcgcgaga
     5281 ctactttact gctgttaaca cgtcaggttc gaacataaca ctgatttaat catatttcat
     5341 cgttttgacg aagttttctg ccattccatt ttgcaccgcc gtgtgtttgg gggcaaggcc
     5401 gaccatctgt gtttcattcg ccagatataa gtgatgagat ggcattctcc ctccttcacg
     5461 gcagaagcat tttgaccgtt taggggatgc ggacgatttt catgcctgct aagatacttt
     5521 cgttactgat gctgtccgtt ttccaccatt tcatcatcac tgattggcgt tgtgtttttg
     5581 gtcagcactc cagctttacg tttctctttt aaccggtaac tctctccttt gatattcagc
     5641 gtgtagcagc cgatctagga tcgctgttgc cagcacgtga tctccgaaca tttctcccca
     5701 gtctgcgacc cctttgtttg acgtcagtat gatgctcgct ttttcatatc gacagt
//
LOCUS       DAJVUK010000206         5670 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.206, whole genome shotgun sequence.
ACCESSION   DAJVUK010000206 DAJVUK010000000
VERSION     DAJVUK010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5670
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.206"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            190..2600
                     /locus_tag="OQQ57_003903"
                     /pseudo
     CDS             190..2600
                     /locus_tag="OQQ57_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416104.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
     gene            2661..5084
                     /locus_tag="OQQ57_003904"
     CDS             2661..5084
                     /locus_tag="OQQ57_003904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416105.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HCS1958468.1"
                     /translation="MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVR
                     AAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRG
                     RSIRRRMNHPDRLKYPMKRVGKCGEGKFERISWDEALDTISDNLRRILKDYGNEAVHV
                     LYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDI
                     ANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLP
                     IRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEG
                     PDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAM
                     LSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTAT
                     RDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTAS
                     AKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRL
                     GPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMLDYEEMKTTGIFKKKCPEEHYVAFRA
                     FREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRK
                     TYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNG
                     EMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSH
                     SNLVQIEKV"
     gene            5095..>5670
                     /gene="dmsB"
                     /locus_tag="OQQ57_003905"
     CDS             5095..>5670
                     /gene="dmsB"
                     /locus_tag="OQQ57_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HCS1958469.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELGCKDFKDLGPEVSFRRIYEYAG
                     GDWQEDNGIWHQNVFAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICIESCPLRALEFGPIEELRQ
                     KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPT"
BASE COUNT         1535 a         1439 c         1420 g         1276 t
ORIGIN      
        1 actgaacgcc ggatatgaca catccggcga tttgaacata caacataatc ccaccttatt
       61 actcataccc ttctattgat gtggattaat aattcttaac ccaaaatggg tagacccccc
      121 tctattgtta gcgcgctaaa tattcaatac ataaacattt atataacgat aaagaacagg
      181 gagtgagtta tgtccaaaaa tgaccgaatg gtgggcatca gccgcagaac actcgttaaa
      241 tcaaccgcga taggttctct ggcgctggct gcaggcggtt tttctttacc gttcaccctg
      301 cgcagtgcag cggcaacggt acaacaggcc agcgaaaaag tgatctgggg tgcctgttcc
      361 gtcaactgtg gtagccgctg tgcacttcgt ctacatgtta aagataatga agtgacctgg
      421 gtggaaactg acaataccgg cagcgatgag tacggcaacc atcaggtacg cgcctgtttg
      481 cgcggtcgct ccatccgccg gcgtattaat catcccgatc gcttgaatta cccaatgaaa
      541 cgcgtgggta aacgcggtga aggcaaattc gaacggatta gctgggatga agccctggat
      601 actatcgcca gtagcctgaa aaaaaccgtc gaacaatatg gcaatgaggc tgtatatatt
      661 cagtactctt cggggattgt tggcggcaat atgacccgct cttcgccatc agcctcggcg
      721 gtcaaacgcc tgatgaactg ctacggcggt tcactcaatc agtatggctc ctacagcacc
      781 gcacaaattt cctgtgccat gccctacacc tacggcagta atgatggcaa cagcaccacg
      841 gatattgaaa acagcaagct ggtcgtgatg tttggtaaca acccggcaga aacccgcatg
      901 agcggcggtg gcatcactta tcttcttgaa aaagcgcgcg agaaatcgaa cgccaaaatg
      961 attgttatcg atccgcgata taccgatacg gctgctggtc gtgaagatga atggcttcct
     1021 attcgcccgg gcaccgatgc cgcgctggtt gcgggtattg cctgggtatt gattaacgaa
     1081 aatctcgttg atcaaccttt tctcgataaa tactgcgtcg gctatgacga aaaaacctta
     1141 cccgcagatg caccaaaaaa tggtcactat aaagcctata ttcttggtga aggtgatgat
     1201 aatacagcga aaacgccgca gtgggcttcg caaattaccg gtatcccggt ggaccgtatc
     1261 atcaaactgg cgcgtgaaat tggcacagca aaacccgctt atatctgcca gggctggggg
     1321 ccgcaacgcc aggcaaacgg cgaactgact gcacgcgcta ttgctatgtt gcctattttg
     1381 acgggcaatg tcggcatcag cggcggaaat agtggcgcgc gtgaatcgac ctataccatt
     1441 accatagaac gcctgccggt gctggataat ccggtcaaaa cgtcaatctc ctgcttcagc
     1501 tggacagatg ctatcgatca tggtccgcaa atgacggcaa tccgcgacgg cgtccgcggc
     1561 aaagataaac tggatgtgcc cattaagttc atctggaact acgcgggaaa taccctcgtt
     1621 aatcagcatt ctgacatcaa caaaacgcat gaaattctgc aggacgaatc gaaatgcgaa
     1681 atgattgtgg tcatcgaaaa ctttatgacc tcatcggcaa actgccagac ctgatgaccg
     1741 ttgagcagga agatattatt cctaacgact acgccggtaa catgggatat ctcattttcc
     1801 tccagcctgt caccagcgaa aaattcgaac gcaaaccgat ttactggatc ctgagtgaag
     1861 tcgcgaaacg tcttggacct gacgtctatc aaaagttcac agaaggtcgc acgcaggaac
     1921 aatggttaca acatctgtac gccaaaatgc ttgccaaaga tccggcgtta ccgtcttacg
     1981 acgaactgaa aaaaatgggt atctataagc gtaaagatcc caatggccat tttgtcgcct
     2041 acaaagcatt tcgtgacgac cccgaggcaa atccacttaa aacgccttcc ggtaagattg
     2101 aaatttattc cagcaggctg gcggaaattg cccgtacctg ggaactggaa aaagatgaag
     2161 tgataagccc attgccagtt tatgcctcaa cctttgaagg ctggaactcc cctgaacgta
     2221 gaaccttccc actgcaactg tttggtttcc attacaaatc ccgtactcac tcgacctacg
     2281 gcaatattga tctcctgaag gctgcctgcc gtcaggaggt gtggatcaac cctatagatg
     2341 cgcagaaacg tgggattgcc aacggcgata tggtgcgggt gtttaaccat cgtggcgaag
     2401 ttcggctacc agccaaagta acaccacgta ttctccctgg agttagcgct atgggccagg
     2461 gagcctggca cgaggccaat atgtctggcg ataaaatcga ccatggcggc tgtgtgaata
     2521 cgctaaccac tctgcgccct tcaccactgg cgaagggaaa cccgcagcac actaatctgg
     2581 tcgagatcga aaaaatataa cccacgacaa ccataaattc tggcatgaca ttttgtttga
     2641 aaagcaataa gtgagtaatg atgaaaatcc ataccacaga ggcgctcatg aaggctgaaa
     2701 tcagccgtag aagtctgatg aaaacctccg cacttggcag tcttgcgctg gcaagcagtg
     2761 ctttcactct gccattttcc caaatggtcc gggcggcaga ggctccggta gaagagaaag
     2821 cggtctggag ttcctgcacc gttaactgcg ggagccgctg tctgttacgt ttgcatgtga
     2881 aagatgacac cgtgtactgg gtggagtctg atacgacagg tgacgacgtc tacggtaatc
     2941 atcaggttcg agcgtgttta cgcgggcgct ctatccgccg acggatgaat catcctgata
     3001 ggttgaaata tcccatgaag cgcgtcggca agtgcggtga aggtaaattt gaacggataa
     3061 gttgggacga agccctggat accatcagtg ataatcttcg gcggatcctg aaagattacg
     3121 gcaatgaggc tgtacatgtc ctgtacggaa caggcgtaga tggcggaaac atcaccaact
     3181 caaacgtccc gtaccgtctg atgaactctt gcggtggttt tctcagtcgc tatggcagct
     3241 acagtaccgc acagatcagt gccgcaatga gttatatgtt cggtgccaat gatggcaaca
     3301 gcccggatga tatcgccaat acgaaactgg tcgttatgtt cggaaataac ccggcagaaa
     3361 cgcggatgag cggcggtggt gtcacttact acgtcgagca agcccgcgaa cgttcaaacg
     3421 cacgcatgat cgtcatcgat ccacgttata acgacactgc tgccgggcgt gaagatgaat
     3481 ggctgcctat tcgccctggc accgatggcg cactggcctg tgcgattgcc tgggtactga
     3541 ttactgaaaa catggtcgat cagccatttc tcgacaaata ttgtgttggt tacgatgaaa
     3601 aaacgctgcc cgccaacgca ccacgtaacg cgcattataa agcctatatt ctgggcgaag
     3661 ggcctgacgg catagctaaa acgccggaat gggcagcaaa aatcaccagc atcccggcag
     3721 aaaaaattat ccagttggcg cgagagatcg gttcagcaaa acctgcttat atttgtcagg
     3781 gttgggggcc acaacgacat tccaacggcg agcaaacgtc ccgcgctatt gccatgcttt
     3841 ccgttctcac cggtaacgtt ggcataaacg gcggcaactc aggtgtacgc gaaggtagct
     3901 gggatctggg ggtagaatgg ttcccgatgc ttgagaatcc tgttaaaacg cagatttccg
     3961 tctttacatg gacagatgcc atcgaccatg gtacggaaat gaccgcgacc cgtgatggtg
     4021 ttcgtggaaa agaaaaactg gatgtcccca tcaagttttt atggtgctac gccagtaaca
     4081 cattgatcaa tcaacatggc gacatcaatc acacccatga ggtgcttcag gatgacagca
     4141 agtgcgagat gattgttggc attgaccact tcatgacggc ctcggctaag tattgcgata
     4201 tcctgttgcc cgacctgatg ccaacagagc aagaagacct tatctctcat gaatctgcag
     4261 ggaatatggg ctatgtgatc ctcgcccaac ccgcaacctc agcaaaattt gaacgcaaac
     4321 ccatctactg gatgctgagt gaagtcgcca aacgcttagg accagacgtt tatcaaacct
     4381 ttactgaagg tcgcagtcag catgaatgga tcaaatatct ccatgcgaaa acgaaggaac
     4441 gtaaccctga gatgctcgac tacgaggaga tgaaaacgac cgggatcttt aagaaaaaat
     4501 gcccggaaga acactacgtc gctttccgcg cattccgtga agatccacag gcaaacccgt
     4561 tgaaaacacc ttcggggaaa atcgaaattt attctgaacg actggcgaag attgcagata
     4621 cctgggaatt gaaaaaagat gaaattattc atccccttcc tgcgtatacc ccaggttttg
     4681 atggctggga cgatcccctg cggaaaacct atccactgca gttaacgggc ttccactaca
     4741 aagcgcgtac ccactccagc tacggcaata ttgatgtgtt acagcaggcc tgcccacaag
     4801 aggtgtggat caaccccatt gatgctcagg cacgcggtat ccgtcatggc gataccgtgc
     4861 gggtatttaa caataatgga gaaatgctga ttgccgcaaa agtgactccg cgtattctgc
     4921 ctggcgttac cgccatcggg caaggtgcgt ggcttaaagc ggatatgttt ggtgaccggg
     4981 tcgatcacgg cggcagtatc aatattctga cctctcaccg cccttcaccg ctggcaaagg
     5041 gaaacccgtc gcacagcaat cttgtccaga tcgaaaaggt ttaaggagta gcccatgacc
     5101 acacaatatg gattttttat cgattccagc cgctgtactg gctgtaaaac ctgcgaactg
     5161 gggtgcaaag attttaaaga tcttggcccg gaagtcagtt tccgccgtat ttatgaatat
     5221 gctggcggcg actggcagga agataatggc atctggcacc agaacgtgtt cgcttattat
     5281 ctctccatct cctgtaacca ttgcgatgac cccgcatgta caaaagtctg ccccagcggc
     5341 gcaatgcata agcgtgaaga tggctttgtg gtggttgatg aagatgtttg tatcggctgc
     5401 cgctactgcc acatggcttg tccgtacggc gcaccacagt acaatgctga aaaagggcac
     5461 atgacgaagt gcgatggttg ttattcgcgc gtcgccgagg ggaaacaacc catatgcatc
     5521 gaatcctgcc cgctgcgtgc acttgagttc ggtccaattg aagagctgcg ccagaagcac
     5581 ggcactctgg ctgccgtcgc gccactgccg cgcgcgcatt tcacaaaacc caatatcgtt
     5641 atcaaaccta acgccaacag ccgcccgacc
//
LOCUS       DAJVUK010000207         5591 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.209, whole genome shotgun sequence.
ACCESSION   DAJVUK010000207 DAJVUK010000000
VERSION     DAJVUK010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5591
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.209"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(35..772)
                     /gene="bamD"
                     /locus_tag="OQQ57_003906"
     CDS             complement(35..772)
                     /gene="bamD"
                     /locus_tag="OQQ57_003906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HCS1958470.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENSYRQMQMNAQAEKVAKIIAANSSNT"
     gene            907..1887
                     /gene="rluD"
                     /locus_tag="OQQ57_003907"
     CDS             907..1887
                     /gene="rluD"
                     /locus_tag="OQQ57_003907"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HCS1958471.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNLDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPEDMVELIEVMRADFEEHKDEVDWL"
     gene            1884..2615
                     /gene="pgeF"
                     /locus_tag="OQQ57_003908"
     CDS             1884..2615
                     /gene="pgeF"
                     /locus_tag="OQQ57_003908"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HCS1958472.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     EHVEENRKQLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            2745..5318
                     /gene="clpB"
                     /locus_tag="OQQ57_003909"
     CDS             2745..5318
                     /gene="clpB"
                     /locus_tag="OQQ57_003909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HCS1958473.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
BASE COUNT         1391 a         1335 c         1516 g         1349 t
ORIGIN      
        1 ctcaagggct gccgttttgt gtttcaggtt tctgttatgt attgctgctg tttgcggcga
       61 tgattttcgc tactttttca gcttgcgcat tcatctgcat ctgacggtat gaattttcca
      121 tcagtggcag cgcatcacgc gtagcctggg tatccgggta gtcgcgcaac atgccttcta
      181 cgcggttaac gacggcaacc catgcaccac gttctgtata gtactcggca acggagtatt
      241 catatttcgc cagacgatct ttcaggaata ccagacgttt ggttgcatcg gtagtgtact
      301 gactgttcgg atagccgcgc accagtttgg aaaagtcact aaacgcagct cgtgcatgtt
      361 gaggatcgcg atcgctacgg tcaacgccaa agaacccttg cagcgcactg tcatccagcg
      421 ccatattggt caggccacgc atgtacatga cataatcgat attcggatgg gtcgggttaa
      481 ggcgaataaa acgatcgatg gcagcctgtg ctaacggcaa atcggcgttt ttatagtagg
      541 cgtagatgag atccagctgc acctgctgcg aatacggacc aaacggatag cgattatcta
      601 atgcttccag ttgcgttatt gcctgtctcc agttaccgtc ctgcagcttt tgttgtgcag
      661 tcgcgtaaat ttcatttggt ggattatcag gtacttcttc ctttgacccc gagcaacccg
      721 ccaaaaacag gcttagtgtg gcggctgcca ccagatattt catgcgcgtc atgacgtttt
      781 gactttcctc aaaatgtaat acgggagatt ctctgttcct gctcccggtt aagaccagct
      841 acaatagcac actatattaa acggcaaagc cgtaaaaccc caacgataaa cgaagaagca
      901 gtatatatgg cacaacgagt acagctcact gcaacggtgt ccgaaaacca actcggtcaa
      961 cgcttagatc aggctttggc cgaaatgttc ccggattatt cacgttcgcg aataaaagaa
     1021 tggatcctcg accagcgcgt gctggtaaac ggcaaagttt gtgataagcc gaaagaaaaa
     1081 gtattgggtg gcgagcaggt tgccatcaac gctgagattg aagaagaagc gcgttttgaa
     1141 ccgcaggata tcccgctgga tatcgtctat gaagatgaag atatcatcgt cattaataaa
     1201 ccgcgcgacc tggtggtaca tcctggcgcg ggtaacctgg atggcacggt actgaatgcg
     1261 ttgcttcatt attatccgcc cattgccgat gtaccgcgtg cgggcatcgt ccatcgtctg
     1321 gataaagaca ccactggcct gatggttgtg gcaaaaaccg ttccggctca gacgcgttta
     1381 gtcgaatctt tgcaaaggcg tgaaattact cgtgagtatg aagcggtggc aattggtcat
     1441 atgaccgctg gcggtacagt agatgaacca atcagccgcc acccgaccaa acgtactcac
     1501 atggcggtgc atcccatggg caaaccggcg gtcactcact atcgcatcat ggaacacttc
     1561 cgtgtgcaca cgcgtctgcg gttgcgtctg gaaaccggac gtacgcacca gatccgcgtg
     1621 catatggcgc atattaccca tccgctggtg ggcgatccgg tttatggtgg ccgtccgcgt
     1681 ccgccaaaag gtgcttcgga agcgtttatc tccacgctgc gtaagtttga ccgccaggcg
     1741 cttcatgcaa ctatgctgcg tctttatcac ccgatctccg gcatcgaaat ggaatggcat
     1801 gcgcctattc cagaagatat ggtggagttg attgaggtta tgcgcgccga tttcgaagag
     1861 cataaggatg aagtggactg gttatgagta agctgattgt cccgcagtgg ccgctgccaa
     1921 aaggtgttgc ggcctgtagc tctacccgta tcggcggcgt gagcttgcca ccttacgact
     1981 ctctcaacct tggcgctcat tgtggtgata acccggagca cgtagaggag aatcgcaagc
     2041 aactttttgc tgcgggaaat ttgccttcaa aaccggtctg gcttgagcag gtacacggca
     2101 aagatgtgct taagctcact ggcgaacctt atgcctcaaa acgggcggat gcctcttata
     2161 gcaatacgcc cggcacggtt tgcgcagtga tgactgccga ctgcctccct gtgctgtttt
     2221 gcaatcgagc gggaacggaa gtcgccgccg ttcatgctgg ctggcgtgga ctgtgcgcag
     2281 gcgtgctgga agagacggtt tcctgttttg ctgataaacc tgaaaacatt ctcgcctggt
     2341 tagggccggc aattggtcca cgcgcgttcg aagtgggggc ggaggttcgc gaggcgttta
     2401 tggcagtaga cgctaaagca agtgcagctt tcattcagca tggtgataag tatctggcgg
     2461 atatttatca gcttgcccgg cagcgtctgg cgaacgtggg tgttgagcaa attttcggcg
     2521 gcgaccgttg tacatatacg gaaaatgaga ctttcttctc ttatcgtcgc gacaagacca
     2581 ccggtcgtat ggcaagtttc atttggctga tataacctaa agaatcaaga cgattcggta
     2641 cgcgtgattt tcttttcaca ttaatctggt caataacctt gaataattga gggatgacct
     2701 catttaatct ccagtagcaa ctttgatccg ttatgggagg agttatgcgt ctggatcgtc
     2761 ttactaataa attccagctt gctcttgccg atgcccaatc acttgcactc gggcacgaca
     2821 accaattcat cgaaccactt catttaatga gcgccctgct gaatcaggaa gggggttcgg
     2881 ttagtccttt attaacatcc gctggcataa atgctggcca gttgcgcaca gatatcaatc
     2941 aggcattaaa tcgtttaccg caggttgaag gtactggtgg tgatgtccag ccatcacagg
     3001 atctggtgcg cgttcttaat ctttgcgaca agctggcgca aaaacgaggt gataacttta
     3061 tctcgtcaga actgttcgtt ctggcggcac ttgagtctcg cggcacgctg gccgacatcc
     3121 tgaaagcagc aggggcgacc accgccaaca ttactcaagc gattgaacaa atgcgtggag
     3181 gtgaaagcgt gaacgatcaa ggtgctgaag accaacgtca ggctttgaaa aaatatacca
     3241 tcgaccttac cgaacgagcc gaacagggca aactcgatcc ggtgattggt cgtgatgaag
     3301 aaattcgccg taccattcag gtgctgcaac gtcgtactaa aaataacccg gtactgattg
     3361 gtgaacccgg cgtcggtaaa actgccatcg ttgaaggtct ggcgcagcgt attatcaacg
     3421 gcgaagtgcc ggaaggattg aaaggccgcc gcgtactggc gctggatatg ggcgcgctgg
     3481 tggctggggc gaaatatcgc ggtgagtttg aagaacgttt aaaaggcgtg cttaacgatc
     3541 ttgccaaaca ggaaggcaac gtcatcctgt ttatcgacga attacatacc atggtcggcg
     3601 cgggtaaagc cgatggcgca atggacgccg gaaacatgct gaaaccggcg ctggcgcgtg
     3661 gtgaattgca ctgcgtaggt gccacgacgc ttgacgaata tcgccagtac atcgaaaaag
     3721 atgctgcgct ggaacgtcgt ttccagaaag tgtttgttgc cgagccttct gttgaagata
     3781 ccattgcgat tctgcgtggc ctgaaagaac gttacgaatt gcaccaccat gtgcaaatta
     3841 ctgacccggc aattgttgca gcagcgacgt tgtctcatcg ctacattgct gaccgtcagc
     3901 tgccggataa agccatcgac ctgatcgatg aagcagcatc cagcattcgt atgcagattg
     3961 actcaaaacc agaagaactc gaccgactcg atcgtcgtat catccagctc aaactggaac
     4021 aacaggcgtt aatgaaagag tctgatgaag ccagtaaaaa acgcctggat atgctcaacg
     4081 aagaactgag cgacaaagaa cgtcagtact ccgagttaga agaagagtgg aaagcagaaa
     4141 aggcatcgct ttctggtacg cagaccatta aagcggaact ggaacaggcg aaaatcgcta
     4201 ttgaacaggc tcgccgtgtg ggggacctgg cgcggatgtc tgaactgcaa tacggcaaaa
     4261 tcccggaact ggaaaagcaa ctggaagccg caacgcagct cgaaggcaaa actatgcgtc
     4321 tgttgcgtaa taaagtgacc gacgccgaaa ttgctgaagt gctggcgcgt tggacgggga
     4381 ttccggtttc tcgcatgatg gaaagcgagc gcgaaaaact gctgcgtatg gagcaagaac
     4441 tgcaccatcg cgtcattggt cagaacgaag cggttgatgc ggtatctaac gctattcgcc
     4501 gtagccgtgc ggggttggcg gatccaaatc gcccgattgg ttcattcctg ttcctcggcc
     4561 caacgggtgt ggggaaaact gagctttgta aggcgctggc gaactttatg tttgatagcg
     4621 acgaggcgat ggtccgtatc gatatgtccg agtttatgga gaaacactcg gtgtctcgtc
     4681 tggttggtgc gcctccggga tatgtcggtt atgaagaagg tggctacctg accgaagctg
     4741 tgcgtcgtcg tccgtattcc gtcatcctgc tggatgaagt ggaaaaagcg catccggatg
     4801 tcttcaacat tctgttgcag gtactggatg atggtcgtct gactgacggg caggggagaa
     4861 cggtcgactt ccgtaatacg gttgtcatta tgacctctaa cctcggttcc gatttgattc
     4921 aggaacgctt cggtgaactg gattatgcgc acatgaaaga gctggtgctc ggtgtggtaa
     4981 gccataactt ccgtccggaa ttcattaacc gtattgatga agtggtggtc ttccatccgc
     5041 tgggtgaaca gcacattgcc tcgattgcgc agattcagtt gaaacgtctg tacaaacgtc
     5101 tggaagaacg tggttatgaa atccacattt ctgacgaggc gctgaaactg ctgagcgaga
     5161 acggttacga tccagtctat ggtgcacgtc ctttgaaacg tgctatccag cagcagatcg
     5221 aaaacccgct ggcacagcaa atactgtctg gtgaattggt tccgggtaaa gtgattcgcc
     5281 tggaagttaa tgaagaccgg attgtcgctg tccagtaatg ataaaacgag cccttcgggg
     5341 ctcgtttttg tctataagtt agacggaaaa gactatattt aagatgtttt gcctgaaaaa
     5401 tgagcgaacg ataaagtttt tatatttttc gcttgtcagg ccggaataac tccctataat
     5461 gcgccaccac tgacacggaa caacggcaaa cacgccgccg ggtcagcggg gttctcctga
     5521 gaatctcaac agagaaaagc aaaaaaatgc ttgactctgt agcggggaag cgtattatgt
     5581 acaccccgcg c
//
LOCUS       DAJVUK010000208         5585 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.210, whole genome shotgun sequence.
ACCESSION   DAJVUK010000208 DAJVUK010000000
VERSION     DAJVUK010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5585
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.210"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..391)
                     /locus_tag="OQQ57_003910"
     CDS             complement(<1..391)
                     /locus_tag="OQQ57_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1958474.1"
                     /translation="MGILEQEMKRLAQQAGGSHKTVHDRIKLVQRFCERLVLAQNVQI
                     RRVEQLKARYIEGYVRERLAQGITKRSLQNEMAAVRCILKQAGRDRLAQSERLNNRSL
                     GLSGASRNGTKRAITPEHYRHVLETARA"
     gene            950..1096
                     /locus_tag="OQQ57_003911"
     CDS             950..1096
                     /locus_tag="OQQ57_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000285696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958475.1"
                     /translation="MYRIKTLASVAMFCDPVFAEVCTGKRIDRPDNRRFFQVVKRWAL
                     STTA"
     gene            complement(1256..1573)
                     /locus_tag="OQQ57_003912"
     CDS             complement(1256..1573)
                     /locus_tag="OQQ57_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016161430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HCS1958476.1"
                     /translation="MDRGEIWLVSLDPTTGHEQSGKRPVLIVSKASFNTFTRLPVVVP
                     VTSGGNFAREAGFTVSLDGAGTKTTGVIRCDQPRTIDMGARSGKRLERIPDAVVNEVL
                     ARL"
     gene            complement(1574..1831)
                     /locus_tag="OQQ57_003913"
     CDS             complement(1574..1831)
                     /locus_tag="OQQ57_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000557619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HCS1958477.1"
                     /translation="MYTTRLKKVGGSVMLAVPPAVLKTLGLSTDSEVGMTIDNGCLII
                     EPQKRPRYSLEELLAQCDPHAEISEEGREWIDAPAVGKEIL"
     gene            complement(2180..2386)
                     /locus_tag="OQQ57_003914"
     CDS             complement(2180..2386)
                     /locus_tag="OQQ57_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003842122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1958478.1"
                     /translation="MMLQDWHPADIIAGLKKRGTSLSALSRQAGLASSTLANALTRRW
                     PKGERLIAEALGIKPEQIWPSRYR"
     gene            complement(2383..2844)
                     /locus_tag="OQQ57_003915"
     CDS             complement(2383..2844)
                     /locus_tag="OQQ57_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000201268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958479.1"
                     /translation="MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVL
                     RLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDALPADMPRFVPDAELLCDYSLTLA
                     QLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA"
     gene            complement(3215..4819)
                     /locus_tag="OQQ57_003916"
     CDS             complement(3215..4819)
                     /locus_tag="OQQ57_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958480.1"
                     /translation="MITKELVDESNFISQLVDIGRFDESYQQSVAFLNKLERITIRND
                     NYFIVLANIAGALVDIGQMQNNKNASELGCNLMEDNKEAFISVLGECLYYYNYGNALS
                     NLVSITNPNDHTFKSIEELVSLKNIYWRSFKLSAEEQEEFQAELSVNLANSLRSQFRL
                     SESLRYYDLTNLKGLDIPQAWVNRSMSLMVLNLISSSFSIKLLKEVRAGYIKASVSKN
                     IPPQWESFYLERIAQTNEKIAEYAVDDETDEHDEALTQQEFEVLSPYRQFCLRNHLTL
                     SEHGLYCPCVGSATDDLVIASRGGVTGDFIIPMEMVLNRLKSEFSLARHLYFDYLHPQ
                     NTDYIKYESHFLELYNDEVLGIEIEKIRTAFRLCFGILDKIAVAICELYNLYPTTKKG
                     TPQKNIYFQNFWQLDVDNRRQLFEKVKSPGLLALYSIATDLNKDKGGELAFYKEWRNG
                     LEHKFLVVHKSDKPEDIYESYQLIEDILFIKESDFIHHFEHLLQITRSAIFSFAFMVR
                     QEGMKEKKEGIHYMTRELHAINYSAD"
     gene            complement(4832..5197)
                     /locus_tag="OQQ57_003917"
     CDS             complement(4832..5197)
                     /locus_tag="OQQ57_003917"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958481.1"
                     /translation="MVSDKRADIIVSLPQIKIPIEIKRDYHRDVWTALNGQLDKLYTK
                     NPDAAGHGIYLVFWFGSARPNSLPHLAKNTSQPENASAMENMLNETVPVDKRDRLSAI
                     VIDVSCEGIPPVEAPKSSV"
     gene            complement(5225..5434)
                     /locus_tag="OQQ57_003918"
     CDS             complement(5225..5434)
                     /locus_tag="OQQ57_003918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958482.1"
                     /translation="MNKTPANIMDLYSLLLDHIRDISNRIANENTDIYKQFWNEDSYG
                     RTLTPKPEESCRNIFLDLLRVRLNP"
BASE COUNT         1446 a         1342 c         1304 g         1493 t
ORIGIN      
        1 ttgcgcgggc ggtttccagc acatggcggt aatgctccgg cgtgatggcc cgcttcgtac
       61 cgttacggga tgcgccagac aggcccagcg agcggttatt cagtcgctca ctctgcgcca
      121 gcctgtcacg cccggcctgt ttcagaatgc agcgcaccgc cgccatctca ttttgcaggg
      181 aacgcttcgt gataccctgc gccagtcgtt cacgaacata tccctcaata taccgcgcct
      241 taagctgctc cacccggcgg atctgcacat tctgtgccag aaccagacgc tcacaaaacc
      301 gctgcaccag cttaatacgg tcgtgaacgg tcttatggct gccgcccgcc tgttgtgcca
      361 atcgcttcat ttcctgctcc agaatcccca tacattcccc ctttcatgat tgccgcaaac
      421 tcatccccaa aaactcaaca ctgatacagc gttccccggc gcacaggccg atagcccctg
      481 agttttgtcg gggctgcgaa cgatacctga gcgccggggc ggcagccgtt gaggtgtggt
      541 ggggcttcgg ttgtgctctc agagcagccg cccgcttgcg cgggtcatcc cccggatcgt
      601 ccagatccgc ctcggtatcg gttcatattc tccttatggg taaatggcct aaaaaggcgg
      661 tgtcagaatc cagccatgag ctggcgcagt tgagttttct ggtgcaggtc gaaagggctt
      721 gcgtgcgtca ctttcccgct ttgcgcggtt aaagtgacgc acggatctgg tgcagcatct
      781 gagatttatc gtctggtgca gttttacggt cacgcggcag caaagcctga cggcaatgca
      841 ggccgcagcc cgtaaggtaa aaggcgctga gggtgtcagc agatgcaggt tagccgggag
      901 aattccggcg cggtgcagat tcagaccagc aggctggcga agtaaaagga tgtatcgtat
      961 taaaactctg gcctccgtcg cgatgttctg cgacccggtg tttgcagagg tctgcaccgg
     1021 taaacggatc gaccgtcctg ataacaggcg cttctttcag gttgtgaagc gttgggcgct
     1081 gtctacgaca gcatagagca agggggagac tacgcctgtg ccgctggcgc ggaaaggaga
     1141 aactgttttt acctgcaaaa ggatttttta atcacttgtt gttataaaaa atgagggcgc
     1201 tgtatgtgac agcgccctcg ttcaggttac ataaaaaata tcagctcaga atagcttaca
     1261 gtcgagccag cacctcattc acgacagcat cgggtatacg ttccagccgc ttaccgctcc
     1321 gagctcccat atcaatggtt ctgggctggt cgcagcgaat aacgcccgtt gtttttgttc
     1381 ccgccccgtc cagtgaaacg gtaaaaccgg cttcgcgggc aaagtttccg ccgctggtga
     1441 cagggacaac aacaggcaac cgggtgaacg tgttaaacga tgccttcgat acgatgagta
     1501 ccggacgttt tccactttgt tcatggccag tggtgggatc cagtgaaacg agccagattt
     1561 ctcctctgtc catctacagg atctccttgc ccaccgcagg cgcatcaatc cattcccgac
     1621 cctcttcgct tatttcagcg tgcggatcgc actgcgccaa cagttcttcg agcgaatagc
     1681 ggggacgttt ttgaggttca ataatcaggc agccattatc aatggtcatg cccacttcgc
     1741 tgtccgtcga cagccctagc gttttcagca ctgcgggggg aaccgccagc atgacggatc
     1801 cgccaacctt tttcaggcga gtggtataca tagagcacct ccggatatta tattttaata
     1861 taacatccat gatagacgat gcacaactat tcatcagatt cattgtggtt tccttagtgt
     1921 aataaagcgt gaagaaagcc ttaatccatc ggaagacaga tccggcagtt ttcaaaggcg
     1981 acattgccgg taaaagggca accgtcctga tacatcaggc gcttctttca ggtcatgaag
     2041 catttcgtac aggcgggagc ttagtgcgta acaaagaagg ccgataatag gaaactgctt
     2101 ttgcagttca aaggattatg acggttcgga taaacaaaat gcggcgcagc ttccgtatcc
     2161 gggctgcgcc gcaggaacat cagcggtagc gcgaaggcca gatttgctca ggcttgatgc
     2221 ctaacgcttc ggcaattaac ctttcgcctt tgggccagcg gcgggtaagc gcattagcca
     2281 gcgtggagga cgccagacct gcctgacgcg aaagcgctga cagcgaagtg cctcgttttt
     2341 tcagcccggc gataatgtcg gcaggatgcc agtcctgcag catcatgcag ccacctcgtc
     2401 gataaacttc acgccatcgg cggtgcggag ccagcgcggg gctttcattt cggcggcaaa
     2461 ataccagacc agttcacata ataagcctgt tatcgtctgc tccacttttg gctgcatccc
     2521 ctgcccgata agaagttgcg ccagcgtcag tgagtaatca caaagtaatt ctgcgtcggg
     2581 gacaaatcgg ggcatatcgg caggtagagc atcaacggtc aggctgtcag tcagatgaga
     2641 cgggatgggg tcgttcagcg tgggttgcag caaagtgaga caggcggcaa gtcgcccgca
     2701 aagcgccagc cgcagcaccg gatcttcgct ttcgatcagg gtttcggcga cgttttcgca
     2761 gtggtctgcc agtacggtaa aatctgtggc agcactgaag ggaacagcaa gtaacgggtg
     2821 tgtctgagtg gggatcgtag ccataaaggc agcctccagt atgtggtttg aaaaccacca
     2881 ccagaggttc caatctcatg ggtggtggac tgaacgaggt tggaactacc ggccatactg
     2941 gaaccggcgc accttacggt gcccccgccc agcccaccat aattttggtg tagctaagcg
     3001 cgcgacataa aaaaagacgc agacgcgtca cgtgtcgcca gtatggttat atttcggggt
     3061 tccaatcccg gcacctgatt ttgcaggtgc gggtaaaaga taccgctttc ggttgaaaac
     3121 ggcaagggga agtcgtggaa tagagatcgc agattgttat aaatatacac aatagttaat
     3181 gttaacaaag acggcacata tattaacttt actctcaatc tgctgaatag tttatcgcat
     3241 gtaattctcg ggtcatatag tggataccct ccttcttttc tttcatcccc tcttgcctca
     3301 ccataaaagc aaacgaaaaa attgctgaac gagttatctg aagtaaatgc tcaaaatggt
     3361 gaataaaatc actttctttg ataaaaagaa tatcttctat tagttgataa gattcgtaaa
     3421 tgtcctcagg tttatcactt ttatgtacaa ctaaaaactt atgctctaaa ccattgcgcc
     3481 attctttata gaaagccaac tccccaccct tatctttatt caggtcggta gcaatactgt
     3541 acagcgccag aagccctggt gattttacct tttcaaataa ttgtcttctg ttatcaacat
     3601 ctaactgcca gaaattctga aaatagatat tcttctgagg tgtacctttt tttgttgttg
     3661 ggtaaagatt ataaagttca catatggcta ccgcaatttt atcaagaata ccaaagcaaa
     3721 gacgaaatgc cgtcctgatt ttttcaattt ctattcctaa aacttcgtca ttatacaatt
     3781 ccagaaaatg gctttcgtac ttaatgtaat ccgtattttg tggatgaaga taatcaaaat
     3841 aaagatggcg tgcgagtgaa aactccgatt taaggcgatt taataccatc tccatgggaa
     3901 tgataaaatc acctgttaca ccgcctcgcg aagcaatcac aagatcatct gtagcactcc
     3961 ctacacatgg gcaatacagg ccatgttctg ataaagtcag atgatttcta agacaaaact
     4021 gtcgatatgg gcttaacact tcgaactctt gttgtgtaag tgcttcatcg tgttcgtcag
     4081 tttcatcatc aacagcatat tctgcgattt tctcgttagt ctgcgctatg cgttctaaat
     4141 agaacgattc ccattgtggt gggatatttt ttgatacaga cgctttaata tatcctgctc
     4201 tcacttcttt tagtaacttg attgaaaatg aagatgaaat aagattgagg accataagtg
     4261 acatcgaacg gttgacccaa gcctgtggta tatctaatcc cttaagattg gtaagatcat
     4321 aatatctcaa tgactcactg agccgaaatt gacttcttaa tgaattagcc aaattaacag
     4381 atagttcagc ctgaaattcc tcctgctcct cagcagatag cttaaaagaa cgccagtaga
     4441 tattttttaa ggaaaccaat tcttctatcg atttgaatgt atggtcattg gggttagtaa
     4501 tgctcaccag attagatagc gcattaccat agttataata gtaaaggcac tctcctaaca
     4561 ctgatataaa tgcttctttg ttatcttcca tcaggttgca accaagctct gacgcatttt
     4621 tattattttg catctgcccg atgtcaacaa gagcacccgc aatgttcgcc aatactataa
     4681 agtagttatc gttcctgatt gttattcttt ccagtttgtt caggaacgca actgactgtt
     4741 gataagattc gtcaaatctt ccaatatcaa ccagttggct aatgaaatta ctttcatcga
     4801 caagttcttt tgttatcaaa ataaattttc cttatacaga ggatttcggt gcttcaacag
     4861 gaggtatgcc ctcacaggag acatctataa ctatcgctga taagcggtct cttttatcaa
     4921 ccggcacagt ttcattaagc atattttcca ttgcactggc gttttcaggt tgagatgtat
     4981 ttttcgccaa atgaggcagg gaattcggtc gagcagaacc aaaccaaaaa accagataga
     5041 taccgtgacc agcagcatcg gggtttttag tataaagctt gtccaattgc ccattaagtg
     5101 cagtccagac atcacgatga taatcacgct ttatctcgat aggtattttt atctgcggta
     5161 gtgaaacaat gatatctgcc cttttatcag aaaccatgtg tccttctggt tcacagctta
     5221 ttttttatgg attaagccgg acacggagta aatccagaaa aatattacgg caactctctt
     5281 caggtttagg cgttagggta cggccatagc tgtcttcatt ccagaattgc ttataaatat
     5341 cggtattttc attggcaatt cggttagaaa tatcccgtat atgatcaagc aataatgagt
     5401 aaagatccat tatgttggca ggcgttttat tcatcaatgt acttacagtc tgcttccagt
     5461 cggcatgatg gaactgtgat tctctataac gaattttctg attgctttgg gcatgtgaga
     5521 gatgatcccg ataactttca cattcaggca gcagtaataa gcgctcaagt acttcactag
     5581 catcg
//
LOCUS       DAJVUK010000209         5519 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.211, whole genome shotgun sequence.
ACCESSION   DAJVUK010000209 DAJVUK010000000
VERSION     DAJVUK010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5519
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.211"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(336..599)
                     /locus_tag="OQQ57_003919"
     CDS             complement(336..599)
                     /locus_tag="OQQ57_003919"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HCS1958483.1"
                     /translation="MDTHYYVSSLEIAPEQAAKAVRQHWHIENQQHWVLDVAYREDAS
                     RLGDREAAGFFALFRRILRPSNRMSHLGKLWFRTHYSPNKKRL"
     gene            865..1158
                     /locus_tag="OQQ57_003920"
     CDS             865..1158
                     /locus_tag="OQQ57_003920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958484.1"
                     /translation="MIGILKESPKDPDSLKVISITTPARGFSKYGFGSTEHGWFTTIT
                     YNAKNSYGGYVGAKSITFVYLNGDYKVAVPMSNGERVMLDKVSFSCKDNCQTK"
     gene            complement(1186..1341)
                     /locus_tag="OQQ57_003921"
     CDS             complement(1186..1341)
                     /locus_tag="OQQ57_003921"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958485.1"
                     /translation="MNSKQKCSHSNLEKEYYLGSATGDYKCLDCGEVVFGKDWPEKER
                     SKNDNEE"
     gene            2304..2453
                     /locus_tag="OQQ57_003922"
     CDS             2304..2453
                     /locus_tag="OQQ57_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017880354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958486.1"
                     /translation="MPSEYDEQLDSTDTQLPGEYDLFDLMAQVTEENLHAPVDFGPPV
                     GREAL"
     gene            3523..3747
                     /locus_tag="OQQ57_003923"
     CDS             3523..3747
                     /locus_tag="OQQ57_003923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000879771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraY domain-containing protein"
                     /protein_id="HCS1958487.1"
                     /translation="MLAIRLSDEIESRLDSLAKQTGRTKTFYAREAILAHLEDLEDYY
                     LSAETAARVRRGDEAVHSSEDVRKSLGLDD"
     gene            3731..3997
                     /locus_tag="OQQ57_003924"
     CDS             3731..3997
                     /locus_tag="OQQ57_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HCS1958488.1"
                     /translation="MVWTINYSDRALKSLRKMDKQNARRIVDFMDLRIAVAADPRQSG
                     KPLKGELGEFWRYRVGDYRILCEIRDDELVILAATIGHRREVYD"
     gene            complement(4044..4313)
                     /locus_tag="OQQ57_003925"
     CDS             complement(4044..4313)
                     /locus_tag="OQQ57_003925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958489.1"
                     /translation="METITHPTLVQLVAAGAVRVVIAVGQPGGWTLLVRYGLAERALA
                     AQRSKQLRVFRKLDTLVLYLQQIGVCRFEVDATGFMGAPRQIRSS"
     gene            complement(4501..4599)
                     /locus_tag="OQQ57_003926"
     CDS             complement(4501..4599)
                     /locus_tag="OQQ57_003926"
                     /inference="COORDINATES: protein motif:HMM:NF015750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958490.1"
                     /translation="MATIIVHCPRCQSDCVCRHGKGAVSVPCWRVF"
     gene            complement(4641..>5519)
                     /locus_tag="OQQ57_003927"
     CDS             complement(4641..>5519)
                     /locus_tag="OQQ57_003927"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HCS1958491.1"
                     /translation="IISGFIMCYTTHNKNLTIISFLTLRVQRIIPLYWVFTTLALTVF
                     VISPSLVNSSGGETSIIDSYFLIPSSAKYLVNNGWTLSYEFYYYLIFSLFLVAFSSTK
                     LRYACIIATLLILSSFGLIFQPEDIVVDFLLSSWLYEFAIGVILFVAYDRGLVKANFG
                     YISVTLALAFLLYKNFNMEYLSGAPRVISIGVPMGLLFYGFLSFEGYFKRKKHFISNL
                     FERIGDSSYSLYLSHPFVLSPMAIIASKLGVTNSFLFGVILIGSSVFIGYATYVIIEK
                     RIIYFTKIKLVMPSVG"
BASE COUNT         1542 a         1257 c         1215 g         1505 t
ORIGIN      
        1 aaaaaaaaga tcgacccccg acccgcctat atgaaaccaa cttaaagttt ctgtattgta
       61 aatatttcct ttatgagcag tatgagccat aacgacaaga agagcagcaa taccccgcaa
      121 aaactgtata gaatataaca tcgaccacct aattccttac attatagttc atataaccta
      181 accatcttaa gcaagtgtta gaaatgggta cttaatggac accaaaaaaa tttaagcttt
      241 ccaataagtt agctagctaa aggccatgat tggcccaata atagtattct accaataaac
      301 caccagttaa tacaccgcca acggcacccg ctgttttata aacgcttctt gtttggcgag
      361 taatgagttc tgaaccagag cttacccaga tgcgacatcc tatttgaggg gcgcaggata
      421 cggcgaaaca gggcaaaaaa ccctgcagct tctctatctc cgagccgact ggcatcttcc
      481 cgatacgcca catccagcac ccaatgttgc tgattttcaa tgtgccaatg ctggcgaacc
      541 gctttggctg cctgttccgg cgctatctcc agcgagctga cgtaataatg ggtatccaag
      601 cttagagcct atcccaatag gctcttaaag tcggcaacgt ctatttattt tcacagcgca
      661 taacggatgt tatggtaaat ctatctataa atatctatta tagtggattt cctatagttg
      721 ttttggaaaa tgacaaggat atatatgaaa ataattaagt gggcttcact gtctggtgtt
      781 ctgttaatat ctgcttgtgg tgtttcttag aacgaagtaa atagtgctaa ttatggttta
      841 aaaccaatag ataatgatgc gaaagtgatt ggtatactta aagagagtcc aaaagatcct
      901 gattctctaa aagttatatc aataaccacc cccgccagag gtttttctaa gtatggcttt
      961 ggctctacag agcatggctg gttcactact atcacatata atgcaaaaaa ctcttatggc
     1021 ggttatgttg gtgctaagtc cattactttc gtttacttaa acggagatta taaagtggca
     1081 gtgccaatgt ctaatggtga gagggttatg ttagataaag tgtcattttc atgtaaagac
     1141 aattgccaaa ctaaatgata aaaaaggtcg caatagcggc tttttttatt cttcgttatc
     1201 atttttactt ctttcttttt ctggccagtc cttcccaaaa acaacctccc cgcaatccaa
     1261 acatttataa tctcctgtgg cgctacccaa gtagtattct ttttctagat ttgaatgaga
     1321 acatttttgt ttgctgttca ctacagtcac ctttggatat tcatttattc gtgaatgatt
     1381 tttatctata ccgacattgt taaatgatgg aaagatcttc ttgagatcct ttttttctac
     1441 gcgtaatctt catgactgta aacgaaaaaa ccaccctggc aggtggtttt tcgaaggtta
     1501 gttaatcctg gcagattctc taaccgtggt aacagtcttg tgcgagacat gtcaccaaat
     1561 ctgtccttcc agtgtagcct cagtcaggcc gccacttcaa gaactctgaa cacatctctc
     1621 gcacaaacct gttaccagtg gctgctgcca gtggcgtttt gtcgtgtctt tccgggttgg
     1681 actcaagacg atagttaccg gataaggcgc agcagtcgga ctgaacgggg ggttcgtgca
     1741 tacagtccag cttggagcga actgcctacc cggaactgag tgtcaggcgt ggaatgagac
     1801 aaacgcggcc ataacagcgg aatgacaccg gtaaaccgaa aggcaggaac aggagagcgc
     1861 acgagggagc taccaggggg aaacgcctgg gatctttata gtcctgtcgg gtttcgccgc
     1921 cactgatttg agcgtcagat tttgtgatgc ttgtcagggg ggcggagcct atggaaaaac
     1981 ggcagcgccg catccttttt ccggccttcc ctgacttgag tgccatctct ttatcttgtc
     2041 attcgtgagc aggtaacgcc cgccgcagcc tcacggcagg agcgtagcga ccgagtgagc
     2101 gaggaggcgt catatcaccg taactcccat tttctccctt acgccctgta gctgcatttt
     2161 cccctgtcac atgaagcact ttcattaggt gctactccgc cgtaacatat tcagccactg
     2221 tacactccgc tagcgctacg tgactggttc agtgctgcgc tccgaaaccc gctaacaacc
     2281 tctccgctac tagatatcac cccatgccat ctgaatatga tgaacaactg gattcgactg
     2341 atacgcagct tcccggcgaa tatgaccttt ttgatttaat ggcgcaggtt actgaagaga
     2401 acctgcacgc cccggtggat tttgggccgc ctgtcggccg ggaagcgtta tagctttttc
     2461 gcttacccgc gtacgtgtaa tacgccggta ttacatctta tttctttatt ttcatgtgat
     2521 tacaggtggt tgtaatacgt tgcgtattac ataaataaac gggaacttca gtttttacct
     2581 tttaattcat gcaattgcga tgaaaatcgc ggttgcgtat ggtgtatggc catttaaggg
     2641 ataaagaatc atctccttac cgggctgagc tttgcctatt ctgaggagat ctgtgaaaaa
     2701 aagcgtccat aactagctcg ttcatacttg tatgaacagc ttattcctcc tgactactaa
     2761 taaactacag cgtcactact gatttactac aaatcggagg aggatgacta cttatctact
     2821 actgatttac tactgaatta ctactgaatt acgtcataac agttctctga accattcgta
     2881 catccgaccc ccttctcttc atgcttgatg ctcttgccaa cgcttcacgg tcacgcaata
     2941 aattgcgtcc ccgttcaccg ttttcggatg agaagaacgt cgaaaacagg acttccactg
     3001 gctgcacggc gtgaaattct gcgctatgca cttgcgcgca tactcatgca tgccgtaaaa
     3061 acagagcctg cgtgtttctg gcgggttttc gggtggtttg ttgccttgtt ttaccggttt
     3121 cccgtcagaa acgctctcag agcctctcag gcggtgcacg caacagatgt tatgttcaat
     3181 cagactgatc tgcgggtaca aaaaaagccc cgggggcttt taactactga cttatttttt
     3241 tgaggatttg ctgggtttca atttgtcagt attccccggc gtttttttat tgtcacgctg
     3301 gcgtttatca ggttcccctg ttgaatcggc aattcgtttc ggacccggct taagacctat
     3361 aatcgttatc ctttcaatag ttaagaggaa agccctcaag ctggatatat tgacagcgtt
     3421 acggattatc aagaggggcc agcaagatta ttttttgttc ttttaggttg attgcgatac
     3481 tattgctata catgtatatc aaatggtgtt caggaggttt atatgcttgc tatccggtta
     3541 tctgatgaga ttgagtcccg tctggactcg ctggcgaagc aaaccggcag aacaaagacg
     3601 ttctatgcgc gggaagcaat actggcgcat ctggaagacc tggaagatta ttatctttca
     3661 gcagaaactg ccgcacgcgt tcgccgtggt gatgaagccg tgcattcgtc tgaagacgtg
     3721 aggaagtcac ttggtctgga cgattaacta ttccgaccgg gcgctcaaat cgttacgcaa
     3781 gatggacaaa cagaacgcac gacggattgt ggattttatg gatttacgca ttgcagttgc
     3841 tgccgatcct cgccagtcag ggaagccgct caaaggtgag ctgggcgagt tctggcgcta
     3901 tcgggtggga gattatcgca ttctgtgtga gatccgggat gacgagctgg ttatccttgc
     3961 cgccaccatt ggccatcgcc gcgaagttta cgactgaagc ccgctatgcg ggcttttttt
     4021 gatgctgata acgcctttta tgttcaagag ctcctgatct gtctcggggc acccatgaag
     4081 cccgtggcat ccacctcgaa ccggcaaacc ccgatctgct gcaggtagag aaccagggta
     4141 tcgagcttgc gaaaaactct gagctgcttg ctgcgctggg cggccagggc acgttcggct
     4201 agaccgtagc gcaccagcag cgtccagccg ccaggttggc caactgcgat cacgacacga
     4261 acagcaccgg ccgccaccag ttgtaccagg gtgggatggg taatggtttc catgggggag
     4321 attccgagac aagggatagt gcggcgcagg atgggagata acgcctagca aaacaagtca
     4381 tcttgcagga tgaccagcag caaaaagggc gtccgattta acgtaacgcc cccttatgcg
     4441 cagtcatcca ggcgggttat gactggggtg ggtactgagc aacgtagctg gttgtcagct
     4501 tcaaaagact cgccaacacg gcacggaaac agcacccttt ccgtggcggc agacgcagtc
     4561 tgattggcaa cgtgggcaat gaacgatgat agtggccata aggaatactg agtcttaaaa
     4621 gccaccatgg ctcacgttca tcaacctact gaaggcatca ccaatttaat tttggtgaaa
     4681 taaattattc ttttctcgat aattacgtaa gttgcataac caataaatac ggacgaccca
     4741 attaatataa ccccaaaaag aaatgaattt gtcaccccta acttactagc aataattgcc
     4801 atcggactta aaacgaaagg atgggaaagg tataaggagt aagagctatc tccaatccgt
     4861 tcaaataaat ttgagataaa atgttttttt cgtttaaaat acccctcaaa tgataagaaa
     4921 ccataaaaca gcaaccccat tggaacacca atagatatca ctcttggagc acctgataaa
     4981 tactccatgt taaagttttt atatagcaaa aaagccaatg ccaatgtaac tgagatataa
     5041 ccaaaattag ctttcaccaa ccccctgtca taagcaacaa ataatataac accaatcgca
     5101 aactcataca gccaactgct taacaaaaaa tccaccacta tatcttctgg ctgaaaaatc
     5161 aatccaaaag aggataaaat taagagagta gcaatgatac atgcatatct tagtttggtt
     5221 gacgagaaag caaccaaaaa taacgaaaag attagatagt aataaaattc atagcttaat
     5281 gtccatccgt tatttaccaa gtatttggca ctagatggta ttaaaaaata cgaatctatg
     5341 atgctagttt ctccaccaga tgagttaaca aggctgggag atataacgaa cacagtcaga
     5401 gctagagtcg taaataccca gtaaagagga atgattctct gaacacgcaa cgtcaaaaaa
     5461 cttatgattg ttaaattttt attatgtgtt gtgtagcaca ttataaaacc tgaaataat
//
LOCUS       DAJVUK010000210         5440 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.212, whole genome shotgun sequence.
ACCESSION   DAJVUK010000210 DAJVUK010000000
VERSION     DAJVUK010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5440
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.212"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..915
                     /gene="adeQ"
                     /locus_tag="OQQ57_003928"
                     /gene_synonym="yicO"
     CDS             <1..915
                     /gene="adeQ"
                     /locus_tag="OQQ57_003928"
                     /gene_synonym="yicO"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeQ"
                     /protein_id="HCS1958492.1"
                     /translation="IPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSH
                     GVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIG
                     EVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDS
                     VSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYA
                     TAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMK
                     VCTGRWRDLNLCVVVVAALFALKIILVD"
     gene            968..1420
                     /locus_tag="OQQ57_003929"
     CDS             968..1420
                     /locus_tag="OQQ57_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
                     /protein_id="HCS1958493.1"
                     /translation="MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVES
                     MVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKAR
                     LAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH"
     gene            1631..2821
                     /gene="nepI"
                     /locus_tag="OQQ57_003930"
     CDS             1631..2821
                     /gene="nepI"
                     /locus_tag="OQQ57_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418118.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HCS1958494.1"
                     /translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
                     PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRCYVVILFAVLLTLSCLLV
                     SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA
                     APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
                     KRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVK
                     MKKS"
     gene            complement(2862..3155)
                     /locus_tag="OQQ57_003931"
     CDS             complement(2862..3155)
                     /locus_tag="OQQ57_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958495.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
     gene            3377..4195
                     /gene="nlpA"
                     /locus_tag="OQQ57_003932"
     CDS             3377..4195
                     /gene="nlpA"
                     /locus_tag="OQQ57_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HCS1958496.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KLVAVGNTFVFPMAGYSKKITTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
                     GKGLLHTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
                     VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
     gene            complement(4222..5121)
                     /locus_tag="OQQ57_003933"
     CDS             complement(4222..5121)
                     /locus_tag="OQQ57_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1958497.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSLSPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRPEK"
     gene            complement(5232..>5440)
                     /locus_tag="OQQ57_003934"
     CDS             complement(5232..>5440)
                     /locus_tag="OQQ57_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958498.1"
                     /translation="GMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSY
                     HALFWLAIGMLGIAMICLLFIKDI"
BASE COUNT         1299 a         1238 c         1394 g         1509 t
ORIGIN      
        1 attcccttaa gtttacgtat tggtatcacc agcggaattg gattatttat cgccttaatg
       61 ggattaaaaa atactggcgt tattgtcgcc aataaagaca cgctggtgat gattggcgat
      121 ttaagttctc acggcgtgtt gttaggtatt ttagggtttt ttattataac cgtgttgtca
      181 tcacgtcatt ttcatgccgc ggtgctggtt tctatagtgg tgacgtcttg ctgtggatta
      241 tttttcggtg atgttcattt tagcggcgtc tattccattc cgcctgatat tagcggcgtc
      301 attggtgaag tagatttgag cggcgcgtta acacttgaac tcgccggtat cattttctcc
      361 tttatgctga tcaacctatt tgattcatca ggaacattaa ttggtgtaac tgataaagcg
      421 ggcttaatag atggtaacgg taaattcccc aatatgaata aggcgctgta tgttgatagc
      481 gtcagttcgg tggcgggtgc gtttatcggc acctcgtctg ttactgccta tattgaaagt
      541 acttctggtg tggcagtcgg tggccgcacg gggctgactg cggttgtggt tggcgttatg
      601 ttcctgttgg ttatgttctt ctcaccgctg gtggcgatgg ttcctcctta cgcaaccgcc
      661 ggagcgttaa tctttgttgg cgtgctgatg acttcgagcc tggcgcgcgt taactgggat
      721 gattttaccg aatcggtgcc tgcgtttatt accacggtga tgatgccctt tactttctcg
      781 atcaccgaag ggattgcact cggctttatg tcgtactgca tcatgaaagt gtgcaccggg
      841 cgctggcgcg atctgaacct gtgtgtggtg gtggtcgcag ctctgtttgc actgaagatt
      901 attctggtgg attagtaact ggcgagggtt tccagatatc atgagttctg attacgcagg
      961 agaactcatg atctggataa tgctcgccac gctggcggta gtgtttgtgg ttggttttcg
     1021 ggtgctgaca tccggggcca gaaaagcgat tcgccgtctc agtgatcggc tgaatatcga
     1081 tgtcgtaccc gtggagtcga tggtcgatca aatgggaaag tcagccggtg acgaattttt
     1141 acgttatttg catcgcccgg atgagtcgca cctgcaaaac gccgcgcagg tgttgctcat
     1201 ctggcaaatt gtcattgtcg atggtagcga acagaacctg ctgcaatggc atcggatttt
     1261 acaaaaagcc cgtcttgccg cgccgattac cgatgctcaa gtcaggctgg cgctgggttt
     1321 tctgcgcgaa accgaacctg aaatgcagga tattaatgct tttcagatgc gctataacgc
     1381 gttctttcag cctgccgagg gcgttcactg gctgcattaa aaccgcttcg tcttatcagc
     1441 ctacagaccg cgcctgacct gtcgggtgga taagacgttc acgccgcatc cggtaatctt
     1501 tgccctgttc cgtttcgatc ttaactccag ctcaagcaac accgtaaaag ttgcaaaaac
     1561 gttaaatgcg tcacacattt caatgttaaa gtggtcggct tttcccctga aacatgccac
     1621 gggtaacacc atgagtgaat ttattgccga aaaccgcggc gcggatgcca tcacccgacc
     1681 gaactggtca gccgttttct cggtggcgtt ttgtgtcgcc tgtctgatta tcgttgagtt
     1741 tttgcccgtc agtttgttga cgccaatggc ccaggattta ggcatttcgg aaggggttgc
     1801 cgggcaatcg gtgaccgtga ccgcctttgt ggcaatgttt gccagtttgt ttattaccca
     1861 gacaattcag gctactgacc gctgctacgt tgttattttg tttgccgttt tgctgacgct
     1921 ctcctgcttg ctggtttcct ttgctaactc attcagtttg cttttaatcg gtcgtgcctg
     1981 tctggggctg gcgctgggcg ggttctgggc gatgtcggcg tcgctgacca tgcgtctggt
     2041 gccgccgcgt acggtgccga aggcgctgtc ggtgatcttc ggcgcggttt ctattgcgct
     2101 ggtgattgcc gcgccgttgg gcagtttttt aggcgagctt atcggttggc gcaatgtctt
     2161 taatgcggcg gcggtgatgg gcgtgctgtg tattttctgg attatcaaat cattgccttc
     2221 actgccaggc gaaccctcgc atcagaaaca aaatactttc cgcttattac aacgtccggg
     2281 tgtgatggca gggatgatcg ccatcttcat gtctttcgcc gggcagtttg ctttcttcac
     2341 gtatattcgc ccggtgtata tgaacctggc gggattcggc gtggatggct taacgctggt
     2401 gctgttgagt tttggtatcg ccagctttat tggtacgtcg ctttcgtcgt tcattcttaa
     2461 acgttcggta aaactggcct tagcaggcgc gccgttaata ctggctgtga gtgcgttggt
     2521 actgacgttg tggggaagcg ataaaatcgt tgctaccggc gtggcgatta tctgggggct
     2581 aacttttgca ttggttcccg tcggctggtc aacgtggatc acccgctcgc tggccgatca
     2641 ggcagaaaaa gccgggtcta ttcaggtggc ggttattcag cttgctaata cctgtggcgc
     2701 ggcaatcggc ggttatgcgc tggataatat tggtctgact tcgccgttga tgttgtccgg
     2761 cacattgatg ttgctgactg cattgttggt tactgcaaag gtgaaaatga agaaatcctg
     2821 atatcaggta aagaagcgtt ggtcagtagt tgttgctgtt cttacatatc cgggcattct
     2881 accttaccca acgcttccca ataattgctc tgattattac gttccatcgc cacgatggcc
     2941 tcgcgtatat gttgtttatt gttttcatct gacaacatta acttttccca cgcttcatct
     3001 gataatgacg cctgtggcgt gcaaatttta cgtaaatctt gtaataccgt ggttttctct
     3061 tttgcggact gcagtgagct aaaaggcgac tcggcgtata cgatgcctgg catagcgaaa
     3121 aaagtgaaaa taagcagtag tgtcgttggt ttcatggatt caacctttta caaatgtgta
     3181 tcgaatgaag cataagtgta gtttgctttc atcgctctca tcattctgta cgaaacgcgc
     3241 ttgcgtggtc agtaagaagt gccagacttt atattccact tttattcctt tttattctta
     3301 tcgatagcgt ttcgtttttt aaaccgcagc gaccttaccg ctatagtcag gtaatcatta
     3361 ataaaaggat aaaaaaatga aactgacaac acatcatcta cggacagggg ccgcattatt
     3421 gctggccgga attctgctgg caggttgcga ccagagtagc agcgatgcaa aacacattaa
     3481 agttggcgtt ataaatggcg cagaacaaga tgtcgcggaa gtcgctaaaa aggtggcaaa
     3541 agagaaatat ggcctcgatg ttgaactggt aggatttagc ggttcgttgc taccgaacga
     3601 tgcgacaaat catggcgaac ttgatgcgaa tgtcttccag catcgaccct ttcttgaaca
     3661 agataatcag gcgcatggtt ataaactggt agcggtggga aatacgtttg tcttccctat
     3721 ggcgggttat tccaaaaaaa tcacaaccgt ggcgcaaata aaagaaggcg cgacagtggc
     3781 gatccccaac gacccgacca accttggtcg cgcactttta ctgttgcaaa aagagaagct
     3841 aattactctg aaagagggaa aagggttatt acataccgcg ctggatataa ccgataatcc
     3901 tcgtcatttg cagattatgg aactcgaggg ggcgcagctt ccgcgcgtac tggatgatcc
     3961 caaagttgat gtagcgatta tcagcaccac ttacattcag cagacagggc tttctccggt
     4021 gcacgacagc gtatttattg aagataagaa ttcgccgtat gtgaatattt tggtggcacg
     4081 ggaagataat aagaatgcag aaaacgtgaa ggaatttctg caatcttatc aatcacccga
     4141 agtcgctaaa gcggcagaaa ccatttttaa cggtggcgcg gtgcctggct ggtaattctc
     4201 actcatgccg cgccggacga tttatttttc tggccggcga cgggaatcca ttgaaatcaa
     4261 aatcaccgat gacagaatca gcagcgttcc cagccagtcc ggtaatgtga acgtgatccc
     4321 cagcaacagc aaagagagta gcgcgctact taatggttct gcacagctca aaatgctggc
     4381 ttttggaccg ccaattaatt gtgctccttt caggtacaga ctaaatgtca gggacgtacc
     4441 aatgaccacc aaataaaaaa acgccagaat caaactgccg ttaacgacaa agtttgttcc
     4501 ttgtctggca taaaaaggca acagaatcag accgccaatc agcatactcc agccgacgac
     4561 tggtaacgtg ccatagcggg caattagcgt tgagggatag gtggtataga atgcagcagc
     4621 aaatgccgag gcaatgcccc agaacaacgc ggcaggagag agcgataatg acgtcggatt
     4681 accgtgtgtc accaataaaa aagtcccgac cagcgatgtc aaaatagcgc agaaaaccag
     4741 aatgcccggg cgcgatttac gcaccagtga gaaccaggcg acgataatcg tcggtgagag
     4801 gaattgcagc accgttgccg tggctgcgtt cgatttttcg atggttagca aaaaagtgag
     4861 ctgtacagtt agcgcgccaa ccacggaaaa aatcagcagg ctaatggcat ctttatgatt
     4921 gttaataata gaaaagattt tatcgccatg aacaaatgac agcgtcagta gaatcaaacc
     4981 ggcgaatatc aaacgcgtca tagtcaaaaa ctgcgacgac atctggcttt gctccatgat
     5041 gtattgcgcg cagacccctg aacttcccca caacacggcg gcaatcagaa cgttcagcat
     5101 cccctttctg gtggaaccca tttttccctc tgcatactgt tttgtcgttt atgtatgcag
     5161 gcatgatagc aaaaatggcg aggatggctc tgtttgcgcc acgccgattt ttcttagccc
     5221 agactggtga gctaaatatc tttaataaac agcaggcaaa tcatcgcaat acccaacatc
     5281 cctatcgcca gccagaacaa cgcatggtag ctccagattt caaccataat tccgtcaaca
     5341 gagccggcga taatccagcc gacgcgtgaa gtatttgcat ataacgttgt cgcagagcct
     5401 attttttcag gcattaagtc ctgaaaataa agcatgccga
//
LOCUS       DAJVUK010000211         5338 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.213, whole genome shotgun sequence.
ACCESSION   DAJVUK010000211 DAJVUK010000000
VERSION     DAJVUK010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.213"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(890..1831)
                     /gene="fabY"
                     /locus_tag="OQQ57_003935"
                     /gene_synonym="yiiD"
     CDS             complement(890..1831)
                     /gene="fabY"
                     /locus_tag="OQQ57_003935"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HCS1958499.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAH
                     HQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQM
                     QVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
     gene            complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="OQQ57_003936"
     CDS             complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="OQQ57_003936"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HCS1958500.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            complement(2310..3183)
                     /locus_tag="OQQ57_003937"
                     /pseudo
     CDS             complement(2310..3183)
                     /locus_tag="OQQ57_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
     gene            complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="OQQ57_003938"
     CDS             complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="OQQ57_003938"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HCS1958501.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRVPLATLKKSFHMGEAF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            complement(3917..4804)
                     /locus_tag="OQQ57_003939"
     CDS             complement(3917..4804)
                     /locus_tag="OQQ57_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HCS1958502.1"
                     /translation="MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHD
                     GARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKP
                     PHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
                     YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWD
                     DCFGFYNGVKVKLLWPGKLAMTMISSANSLVVFDKQPDATCINPLTQAPNAINLTPEL
                     VTPDRPLVIETRWQFTPES"
     gene            complement(4794..>5338)
                     /locus_tag="OQQ57_003940"
     CDS             complement(4794..>5338)
                     /locus_tag="OQQ57_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958503.1"
                     /translation="GIVYISSQLVLSRDIPLTGMLIASAIGIFSCPLVGWLSDRIGQK
                     SLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAVQPTLFTRMFGT
                     KVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVLSFVCVWLIE
                     PTDEQETASYRYIREQSHEN"
BASE COUNT         1441 a         1346 c         1253 g         1298 t
ORIGIN      
        1 ctgataaatg aagaaaaacc gtattcatcg ccattaccac caccttacct atattactca
       61 ttaatgtatg tgcgaaaatt acgccggaaa atcattaaaa aaagcggatt tttgcatgtt
      121 gttttgtttt tgcgaggcgt tttccagaaa taataagagt gttgcagttg tttcatttat
      181 tactcaaaaa tggtttagtt atcgcccagg atgaattatg ggtgctatga atatattata
      241 ttcagagata tttatttgca taatctgaat ggtgtagccg aaaaacgtca gcatcctaac
      301 agcaccagga tttaaggtga aattaatctt tcatcacaga ccggtcagta ctgccaccaa
      361 ccggtcttta cttgctcatc gttataattt tgttggtaac agttcgggaa agttgttttt
      421 ctaaattaac aacagaataa ctttcttgtt taatgagatt aatattggca accattatag
      481 cctccttccc acggtttaag agcaaacata caacataatg attcataaca tacagagcag
      541 taaatgaatg atactgacaa tgatgccagc ccattatctt tgcataatgt ttgtgagcta
      601 tagattttaa aaatatttat gaggaaagta tggcaccaga ggaggttttg actatcaaaa
      661 atcgctcaaa cctgaactaa gatgatgagt taagcattat ctgcgataat tgccactcag
      721 ctctacaaat aatatttaaa tgctcctgaa cagtgatgta gcaagacacg tatggtgcca
      781 acgaagaata aaaatttata gagttcttat tcaatattac cggcatagac agggaatgat
      841 gtaaatgacc ggaatgaatg agagaggcag caccgcccct ctccataagc tactcttctt
      901 cgttcccgcc ctcttcatac gggccaaatg gcttcgcggg cagaacgata tacgtgcctt
      961 caaacactgc acccggcgtc tcgtcgccaa agatttcaac ttgcatctgc acccgtgctt
     1021 ttcgtccgcg cgccagacgg tcgagatcgc cgcttaaggc accaaggtcg gctaccgcat
     1081 gaggtttacc gctaatcggc ttgctgtagc ggatatgcgc atcggccaga ataatcgttc
     1141 cgccgaggtg gcgttcgcgc agcatcagcc agataagccc ccaaccggtg agcgttgcca
     1201 gcgagaataa actcccggca aacagcgtat ggtgcggatt ctgattaccg gtttccggca
     1261 tggtggtgat aaatttttgc ccggtatatt gctgaatgcg cacgcccatt ttttcactaa
     1321 gcgggatgtg ttcgtaccac gcctgttgca gctgcgcgca ccagtcgccg cgatgcaaaa
     1381 tatcatccag agtggcaaca ggtttaatca tcaaaaaatg gcgaatcggc gtggtggttg
     1441 gtgtggtgat ttctccctga ttaacaaacc ccagcttggc gaaaaactcc accgcgtctt
     1501 cacgggcgct acaggtcacg cgcttaacgc cttcctgacg cgccaccgac tccagggtca
     1561 tcgccatcaa cgtccccagc cctttgtcct gcacgtcggg atgaacggcc ataaagcgaa
     1621 tggacgcttc attgtcggca ttaatataca gtcggcctac cgccaccaga ttcccctgct
     1681 cgtcgacgac catctgatga tgcgccatcg catcccacgc gtcgcgttcc gaaccttttg
     1741 gttgatgcag gggcttacgc aacatttccc agcgaaactg atagtaacgc tctaactctt
     1801 cttctgtttg tggaacccga aggtgataca tagcgatact ctctcttgtt tcccgtgaca
     1861 accctggaag ctggctcata cctgcaacca gaatgtcacg gggccatcat tgaccagcga
     1921 tacctgcata tcggcagcga agcgtcctgt ttgcgtgttc atctcttgct ggcggcagcg
     1981 ttcgacgaaa tagtcatata acgcctctgc gcgatccggt gatgcgcctt tggagaaact
     2041 tgggcgcatc ccccgttcgg tatctgcggc gagggtaaac tgggaaacca ccagtacact
     2101 gccgcccgcc tgttgcacgt tgagattcat cttgccttcg gcatcgctaa agatgcggta
     2161 gccgagcaca cgctcgcaca gacggtttgc tttctgttcg tcgtcatcct tttcgacacc
     2221 caataacacc aaaagtcccg cgccaatttc gcccgtcact tctccctcca cggtgacgct
     2281 ggcacgggtt acgcgttgaa ttaatgcaat catggttcgt cgtcttcttc ttgttcagct
     2341 gcttgtttta gtttgcggta ttccccgaga gtgacagtaa tttccgcgcc aagcaagacg
     2401 atacaccatg tccagtagac ccaaacaaag agaatgggga tcaccgccag cacaccgtaa
     2461 atgagctgat atgacgggaa catggtgata taaagcgcga aacctttctt tcctgcttcg
     2521 aacaggagtg cggcgacaaa cgcgccgaca atcgcgtcgc ggttaggtac gcggatggta
     2581 ggaacaatgc tgtacagcaa ccagaaggag atccacgaca acagcaacgg aaaaatacgc
     2641 agcacgttgt cgatgacagt attgagatcg ctcgcccagc gcagggagag caaataggaa
     2701 ctgatcgcca gactggcccc tgccagcagc ggccccagcg ttaaaatcat ccagtacacg
     2761 gcgaacgagt aaatttttgg tcgcgctcgt ttactgcgcc agatggtatt caacgcgcta
     2821 tcgatggagt acatcaacaa taacgcggtg acgatcagcc cgcacgcccc aacggcggtc
     2881 atcttgttgg aattggcaac aaattgttcg atataccgct gaataacatc gccagtagca
     2941 ggcagaaagt tggcaaaaat aaagtgacgt aactgaatgc tgacgtcgga aaacatggga
     3001 aaagcggcga aaagcgcaaa aacaacggca accagcggca ctaatgagag caacgaccac
     3061 ataggcaagg ttacctgcca gggttgtcat gttgtcctca tcaatacgtt gccagagtag
     3121 ttttagccag gcccatagtg gacgggtacg gtgcctggct ttgtcctgaa tggtttttag
     3181 cataacacct tcgcgaaata gtccgggatg gtggttttat ctttcaccag aatactggta
     3241 atgcccagct gattggctcc ttctatatta tcggcgttat cgtcgaaaaa gaccgtatcg
     3301 ctgggtgaaa aaccttccgc ctgcaaaaca tgctggtaaa ttcgtgcttc aggtttgcgc
     3361 atccccagat cttgcgacag atagatatgg tcagcagcat cacgaatttc cgggtattct
     3421 tccggccaga aggtggtatg caggcggttg gtattggaaa gcaccaccac gcgatgcccc
     3481 tgctcacgca gtttatgcat gatggcgatc acttccgggc gcagcgcaac aaacaccgcc
     3541 tgccagccgt gagagaactg ctcgtagctt agcggtagag ccatctcatg acacagcgcc
     3601 tctgcgaacg cttcgtcgct aatttcccca cgctcatgct gatgaaacgc ctcccccata
     3661 tgaaaactct tcttaagcgt agccagtgga acacgcgtta aatcgctcca ggctcccagc
     3721 acacggttaa agtcgatatc gacaatcaca ttacctaaat caaagatata gagcattttt
     3781 gcctcctttc gcgccacaag aaattaactg tagcgggaaa ggatgggttt ggctatgtgg
     3841 caataagggt aatcttgtga tgctgattgc gaaaaagcag agtaatttca ctggcttttt
     3901 cgcaatagat gaatggttaa gattcaggtg taaattgcca acgagtttcg atgaccagcg
     3961 gcctatctgg tgtcaccaat tccggcgtta gatttattgc gttaggtgcc tgagtcagcg
     4021 ggttaataca ggtggcatcg ggctgtttat caaataccac cagactgttt gcagaagaga
     4081 tcatggtcat cgcgagttta ccaggccaca gtaacttaac cttcaccccg ttataaaaac
     4141 caaaacagtc atcccaggga ccggcttgag gagagatacg atttccagtt ggcagttcat
     4201 cactacccgc ttcttcttgc cagtccgcat caaaaagcac ctgcaacgat tctgtatttt
     4261 gcggagtcag ctttttcgca aaccacggat gccagccagc ggaggccggg aatgtatcgg
     4321 catatgaatg gacttccagt tgcaaaacca gcgcatcgtt ctccagcaaa aaagtctgaa
     4381 tcacttcccc ttgccagggc cacggtgaag ccaggggcat acgtaaagtc agggaatctg
     4441 ctgttttgtc gatgatttcc cacgttgagt aacaagccat accatgcaac gcatgtggtg
     4501 gtttattggc gggtaaagaa taacattgcc caccagcatt cagcgtcgca ttccccagtc
     4561 gccctgccca cggcaccatt gggaaacagc catactgaaa agctctgcgc tgcggctgcc
     4621 attggcgtaa tacttcagaa ccaaatgcct ttaacgaggt tatcctggca ccatcatgcg
     4681 gataaatctg caggtgaata ttgccttttt ccagcgtcac taactctcct acaggcccag
     4741 gccatggcgc gtcaaacgcc tgttgtagcg ccaggtaatg ctcgtttttt cgttcagttt
     4801 tcatgagatt gttccctgat gtagcggtaa gaagcggttt cttgttcatc ggtcggctca
     4861 atcagccaga cgcaaacaaa ggaaagaact gagacagcaa ataaaaacag agcgacatac
     4921 cacggttttc ctccccctag cgccagcaaa cttgaggcga taagggggct tagtccgcca
     4981 agaatcgcgg aaaattgata agcaaaagaa aggccggtat atcgtacttt ggtaccgaac
     5041 atgcgggtga aaagtgttgg ctgcacggca aacatcatcg tcggacctaa gttgtagccg
     5101 aggatcatac tgcaccagat gatgagcgta cttttgctat ccagtaataa gaagaaagga
     5161 aacgcgaaca ggacacaaaa tcctgctccc gacaaataca gacttttttg acctatacga
     5221 tctgataacc atccaaccaa tggacaactg aaaataccga tcgccgaggc aatcaacata
     5281 cccgtcaggg gaatatctcg cgacaatact aattggctgg aaatatagac aataccaa
//
LOCUS       DAJVUK010000212         5119 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.214, whole genome shotgun sequence.
ACCESSION   DAJVUK010000212 DAJVUK010000000
VERSION     DAJVUK010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.214"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1145)
                     /gene="tuf"
                     /locus_tag="OQQ57_003941"
     CDS             complement(<1..1145)
                     /gene="tuf"
                     /locus_tag="OQQ57_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCS1958504.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ
                     YDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDV
                     FSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVG
                     VLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFR
                     TTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGR"
     gene            complement(1260..1335)
                     /locus_tag="OQQ57_003942"
     tRNA            complement(1260..1335)
                     /locus_tag="OQQ57_003942"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1300..1302),aa:Thr,seq:ggt)
     gene            complement(1342..1416)
                     /locus_tag="OQQ57_003943"
     tRNA            complement(1342..1416)
                     /locus_tag="OQQ57_003943"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1381..1383),aa:Gly,seq:tcc)
     gene            complement(1533..1617)
                     /locus_tag="OQQ57_003944"
     tRNA            complement(1533..1617)
                     /locus_tag="OQQ57_003944"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1581..1583),aa:Tyr,seq:gta)
     gene            complement(1626..1701)
                     /locus_tag="OQQ57_003945"
     tRNA            complement(1626..1701)
                     /locus_tag="OQQ57_003945"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1666..1668),aa:Thr,seq:tgt)
     gene            2063..3013
                     /gene="coaA"
                     /locus_tag="OQQ57_003946"
                     /gene_synonym="panK"
     CDS             2063..3013
                     /gene="coaA"
                     /locus_tag="OQQ57_003946"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HCS1958505.1"
                     /translation="MSIKEQTLMTPYLQFDRNQWAAQRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(3042..4007)
                     /gene="birA"
                     /locus_tag="OQQ57_003947"
     CDS             complement(3042..4007)
                     /gene="birA"
                     /locus_tag="OQQ57_003947"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HCS1958506.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(4004..5032)
                     /gene="murB"
                     /locus_tag="OQQ57_003948"
     CDS             complement(4004..5032)
                     /gene="murB"
                     /locus_tag="OQQ57_003948"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HCS1958507.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLLKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1288 a         1308 c         1175 g         1348 t
ORIGIN      
        1 cggccgcctt cacggattgc gaaacgcaga ccgtcgtcca tcgcgatcgg gtggatcagg
       61 gtaacaacca ttttgatgtt gtcgcccggc attaccatct ctacgccttc cggcagttcg
      121 atggtaccag tcacgtcagt agtacggaag tagaactgcg gacggtagcc tttgaagaac
      181 ggagtatgac ggccgccttc atctttggac agaatgtaca cttcagattc gaacttggtg
      241 tgcggcttga tggtgcccgg cttagccagt acctgaccac gttcgatttc ttcacgtttg
      301 ataccacgca gcagaacacc tacgttctca ccagcacggc cttcgtccag cagtttgcgg
      361 aacatttcaa cgccagtaca ggtagacttc tgagtctctt tgataccaac gatttcaact
      421 tcttcaccaa ctttgatgat accgcgttct acacgaccgg taacaacggt accacgaccg
      481 gagatggaga atacgtcttc gatcggcagc aggaacggct tgtcaatcgc acgctctggt
      541 tccggaatgt aagaatccag gaagccagcc agttccagga ttttcgcttc ccactctgcg
      601 tcgccttcca gcgctttcag agcagaacca cgaacgatcg gagtgtcgtc gcccgggaag
      661 tcgtactgag acagaagttc acgaacttcc atttcaacca gttccagcag ctcttcgtca
      721 tcaaccatgt cgcatttgtt caggaacacg atgatgtacg gaacgcctac ctgacgaccc
      781 agcaggatgt gctcacgagt ctgcggcatc gggccgtcag tcgcagcaac taccaggatc
      841 gcgccgtcca tctgagcagc accggtgatc atgtttttaa catagtcggc gtgccccggg
      901 cagtctacgt gtgcgtagtg acgggtcggg gtgtcgtatt caacgtgaga agtgttgatg
      961 gtgataccac gagctttttc ttccggcgcg ttatcgatct ggtcgaatgc gcgagcagca
     1021 ccgccgtagg ttttagccag tacggtagtg attgcagcgg tcagcgttgt tttaccatgg
     1081 tcaacgtggc cgatagtacc gacgttaacg tgcggttttg tacgttcaaa cttttcttta
     1141 gacatcgatt gtccctctaa gacacggata aatcggtgat atcaccacat caaccaggca
     1201 acatgcccga cttgttgaat gcaataaaca gaaggaaaaa acagggagga gaaaagaagt
     1261 ggtgctgata ggcagattcg aactgccgac ctcaccctta ccaagggtgc gctctaccaa
     1321 ctgagctata tcagcacatc ttggagcggg cagcgggaat cgaacccgca tcatcagctt
     1381 ggaaggctga ggtaatagcc attatacgat gcccgcatcc tggaactcgg ctacctgatt
     1441 ttcattctgc actgaatatc gagagaagct ctctttattc gagccggtaa gcgaacttat
     1501 cgtctcgggc tacgccatcg cgtggccgaa attggtggtg ggggaaggat tcgaaccttc
     1561 gaagtctgtg acggcagatt tacagtctgc tccctttggc cgctcgggaa ccccaccgga
     1621 cttgatggtg ccgactaccg gaatcgaact ggtgacctac tgattacaag tcagttgctc
     1681 tacctactga gctaagtcgg catcaagtag cgcgcattct atggagacat gcgagttcat
     1741 gcaactaaaa aattgcataa tttgttttat tggtcacatt ttatgcgaca cgatgaagaa
     1801 acagccgaat ggagggcaga ttagcacact ttttcaacat cattgtgctc aacaatgcgc
     1861 tcctgctaaa ccataattct tcttatcaga tggaatatct gtcacattgc ttttcaacga
     1921 tagcttccta ggagagattt tttcttatta ttcctcccca tctggtgtta ccctcctgcc
     1981 cattaaccca ttcaacagaa ctgtgacgcg ccatggcaaa tatcgctttg ccgatagagc
     2041 tatgaccgcc agaaacatgc ttatgagtat aaaagagcaa acgttaatga cgccttacct
     2101 acagtttgac cgcaaccagt gggcagctca gcgtgattcc gtacctatga cgttatcgga
     2161 agatgagatc gcccgtctca aaggtattaa tgaagatctc tcgttagaag aagttgccga
     2221 gatctattta cctctgtcac gtttgctgaa cttctatata agctcgaatc tgcgccgtca
     2281 ggcagttctg gaacagtttc ttggtaccaa cgggcaacgc attccttaca ttatcagtat
     2341 tgctggtagt gtcgcggtgg ggaaaagtac aaccgcccgt gtattgcagg cgctattaag
     2401 ccgttggccg gaacatcgtc gtgttgaact gatcactaca gatggcttcc ttcaccctaa
     2461 tcaggttctg aaagaacgtg gtctgatgaa gaagaaaggc ttcccggaat cgtatgatat
     2521 gcatcgcctg gtgaagtttg tttccgatct caagtccggc gtgccaaacg ttacagcccc
     2581 tgtttactcg catcttattt atgatgtgat cccggatgga gataaaactg ttgttcagcc
     2641 tgatatttta attcttgaag ggttaaatgt cttacagagc ggaatggatt atccacacga
     2701 tccacatcat gtatttgttt ctgattttgt cgatttttcg atatatgttg atgcaccgga
     2761 agacttactt cagacgtggt atatcaaccg tttcctgaaa ttccgcgaag gggcttttac
     2821 cgacccggat tcctattttc ataactacgc gaaattaact aaagaagaag cgattaagac
     2881 tgccatgaca ttgtggaaag agatcaactg gctgaactta aagcaaaata ttctacctac
     2941 tcgtgagcgc gccagtttaa tcctgacgaa aagtgctaat catgcggtag aagaggtcag
     3001 actacgcaaa taatttgcag gggagcgaat actccccttt cttatttttc tgcactacgc
     3061 agggatattt caccgcccat ccagggtttt attattccat cctgctcaag taataaagcc
     3121 ccctgtttgt ctattccgcg tgaaatgcca aatatttctt tatcaccaat gataagtttc
     3181 actgggcgat taataaaatt atccagcttt tcccagcgcg acagataagg tgccaatcct
     3241 tcttgttcga agagttccaa cgcagcacgt aattcacgta ttagcatggc cgccaacgta
     3301 ttacgatcga gattgatccc cgcttcctgc agcgtgatcc acccctgatt aacgacactc
     3361 tcttcaacac ggcgcattgc catgttgatc ccggctccaa tgactatttg cgccgcatcg
     3421 ccagttttgc cagtcagctc cacaagaatg cctgccagct tgcgatcctg cagatagagg
     3481 tcattaggcc atttgacacg aactttatct gctcccagct tgcgtaatac ttccgccatc
     3541 acgataccga taaccagact taaaccaatc gccgccgccg ggccttgttc cagacgccag
     3601 aacatcgaca aatataagtt tgcgccaaaa ggcgaaaacc atttccgccc ccggcgacca
     3661 cggccagcct gctggtattc tgcaacacag gcatcgcccg atttaagctc tccgatacga
     3721 tcaagaaggt actgattcgt ggagtcaata actggcagca cggctacact accgccatcc
     3781 agctgaccca atatctgttc agcattaagt aactggatgg gctcaggcag gctgtatcct
     3841 ttacccggaa cggtaaagac atcaacgccc cagtcacgca gtgtctgaat gtgtttatta
     3901 atagccgccc ggctcattcc cagcgtttca cccaactgct cgccagagtg aaattcaccg
     3961 ttcgctaaca gggcaatcaa tttcagtggc acggtgttat ccttcatgaa attgtctcca
     4021 ctgcgctcac ttcacctgat gcaccaataa agcggacttc aggctcaagc cagacattaa
     4081 atttttcacc cactttttgt cttacatggt gtgccagttg caccacatct tcgctttttg
     4141 cattgtcttc attaatgaga actaacgcct gttgacggtg caccgcagcc ccacccattt
     4201 gcatcccttt tagctggcac tgatcaataa gccaacctgc tgccagtttt actgaaccac
     4261 ccgcctgggg gtaatttggt gctgttggaa attgcgccag taatgcttta gccgtttcgg
     4321 cagatacaac agggtttttg aagaaactac cggcattgcc attcactttt ggatcaggga
     4381 gtttggtggt gcgcatatga cacaccgcat taaatacttg ctgtggcgtt actgttgtag
     4441 gatccagacg agttaagtca ccatacgtta gtacaggttg ccactctttt agcagacgca
     4501 gacctacggc tacaatggcg aagcgatcct ggtattcatg tttaaaaata ctgtcgcgat
     4561 agccaaaacg gcactctttg gcagttaagc gcacttgctt gcctgtcgcc agttcaacac
     4621 aatcaacata agcgcaaact cgctgtaatt ctacgccata agcaccaata ttctggatag
     4681 gtgatgagcc gacacaacca ggaattaatg ccagattttc cagaccaggc ataccttcct
     4741 gcaaagtgta ttttaccagg cgatgccagt tttctccggc tcctacatgt aaataccacg
     4801 catcaggttc atcatgaatt tcgatacctt tgatccggtt gatgatcacc gtgccgcgat
     4861 agtcttccag aaaaagtaca ttacttcctt cacccagaat aagaacgggt tgtccttctg
     4921 cggttgcata ctgccaggca ttgagtaatt gttgttcgtc ttcggcacat acaatgtgct
     4981 gagcattatg atcaatgcca aatgtgttcc agggttttaa ggagtggttc atagctgctt
     5041 tcctgatgca aaaacgaggc tagtttaccg tatctgtggg gggatggctt gtagttatga
     5101 cgacagggag agtttgtag
//
LOCUS       DAJVUK010000213         5019 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.215, whole genome shotgun sequence.
ACCESSION   DAJVUK010000213 DAJVUK010000000
VERSION     DAJVUK010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5019
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.215"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1726)
                     /locus_tag="OQQ57_003949"
     CDS             complement(<1..1726)
                     /locus_tag="OQQ57_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative frv operon regulatory protein"
                     /protein_id="HCS1958508.1"
                     /translation="MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFT
                     LNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDYRLLALLLLNTFTPRAQLASALN
                     LPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
                     GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV
                     EQSGMFLGDNAVRTLTGLIEKQHQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENI
                     TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDNDLIG
                     LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE
                     IEPLLIINNSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS
                     FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWS
                     EQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVI
                     AGLTGYEAF"
     gene            complement(1726..2796)
                     /locus_tag="OQQ57_003950"
     CDS             complement(1726..2796)
                     /locus_tag="OQQ57_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HCS1958509.1"
                     /translation="MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGS
                     FVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHK
                     GVKIPGVIGSVAPHALTEKQRQRPLSFDEMFIDIGANSRDEVEKRGVAMGDFISPEAN
                     FACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEH
                     IKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAH
                     NDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLI
                     RDFLTTLTAEKVNAFSQFRQMD"
     gene            complement(2786..4237)
                     /locus_tag="OQQ57_003951"
     CDS             complement(2786..4237)
                     /locus_tag="OQQ57_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIBC"
                     /protein_id="HCS1958510.1"
                     /translation="MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQG
                     SSGVENRLSSEEIAAADYVILATGRGLSGDDRARFTGKKVYEIAISQALKNIDQIFSE
                     LPTNSQLFAADSGVKLGKQEMQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFG
                     LPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLAND
                     KALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVL
                     TYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSL
                     LEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAI
                     PYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLA
                     IGLALNISFIIVLKGLWLRRKAKAAQQELVHEH"
     gene            complement(4248..4694)
                     /locus_tag="OQQ57_003952"
     CDS             complement(4248..4694)
                     /locus_tag="OQQ57_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HCS1958511.1"
                     /translation="MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQT
                     LLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGV
                     PQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS"
BASE COUNT         1262 a         1301 c         1269 g         1187 t
ORIGIN      
        1 taaatgcctc atatcctgtt aacccggcaa taacctctgc cggatgctga cacaatatgc
       61 ttgccagata gctaaatatt tttagctcat gacgcgcatc ggcggcggcg caggcgatca
      121 agacatggtt aatgacttcg ttattcacct caactggttg ggcgagggta ataaaaaatc
      181 cacgaaaacg tcgctcctgt tcgctccagc aatgtgggat ggcgaggcga ttaacaatca
      241 ggttttcacc ttcgccttcg cgggcgatga tgcgttgtgc ttcatcggcg gtaatatggt
      301 gttgtgcgac taattgcgca caaatttgcc gggtaatatg ttgccagctt tcaccgcgta
      361 cattcgaata atgaaaactt ccgggggcag agaaaaaacg ctccggttgc tggcgaataa
      421 atgccgtcgc cagaaaatgt tttatttgtt cgataccggc agccgtaatg atatttttta
      481 cggtgatgta attatttacc gcgtcttcca gtaaataatg gctattgtta atgatcaata
      541 acggctcaat ctcttcgcga atggcaacaa gttcgcttaa gctacgggca ataattaccc
      601 gacaatttaa aacatcgcgc tcaatggcga gctgattaat agtggcaatc gcgttctggt
      661 ccgagagcaa aatgatcggc tggcgttcgt tttgatgccg ctccagcgca caggcaaaat
      721 acaaaccgat cagatcgttg tcgaaaaggg gaatatcgag ctgttcacgc agtagcgtaa
      781 taaagtgcag actcatatca aaggccgcag gccaggctgc tttcaggtta ttcatgctac
      841 tttggcggtg ctcagcaatc cacaccggtg cggcaaggca acgtaataaa tgcccggtaa
      901 tattctcaac caactgcgta tcaataatat tcaatgacgc gatgtctggc accctttgca
      961 gcaaccccag cacatgatcg gctgaaatta cctgcgcttg ctgatgctgt ttctctatca
     1021 aacctgtcag ggttcttaca gcgttatcac caagaaacat gccgctttgt tcaacgattt
     1081 gttttatctc gtcaccggga tattgcggcc actcatcggt cagttgatta cgcagggcgt
     1141 aaatcgccag aatcaggctg gagagataat caccctgcat gagcggccag cggtgttggt
     1201 tgtcgcaggc cgtggataaa tgctgaaggt tgtctcgtgt tacgcccgcc agcggaatta
     1261 aaaacggatc tttgcgcagc aagttcgcca gcaagataac gcgcttctct tctgtctcat
     1321 caatgaaatg gcccaaaccg gggcggctgg ccaggcaaca agcgcgttca taacgctgtt
     1381 ttaaccgggg cagacgctct gcgacccacg tttctggcaa attaagcgcc gaggcgagtt
     1441 gcgcacgggg agtaaaggta ttcagtaata acagtgccag cagccgatag tcgttatcgt
     1501 gcttttgcag caactgaaaa aagctgcggc gctcgaagat ttccagctga tagcccgcac
     1561 taccactggc ggaaatgcgg gctttgccgt taagggtaaa gttgagatag tcaatatcac
     1621 gcaggatggt cctgcctgaa acgccagtct gttgcgccag ctcaccaggc gtgcgcggct
     1681 gttgctccag cagatcgaca atctttaact ggcgttcgtt tagcattaat ccatctgacg
     1741 gaactggcta aacgcgttga ctttctccgc ggttaaggtg gtcagaaaat cccgtatcaa
     1801 cgtgagcaga gcatcgtaat cggcttttga aatcataccg ctgttagcgt gcagatagcg
     1861 ggttggcagg cacagcgcaa caaccggacg cccgccgccc atcacgttgt agcgcccgcc
     1921 atccgtcgca ccggttttca tggtggaaaa ttgcagcggt aaatcgttat gtgcggcaca
     1981 gctttttaac gctgctacca gtttctggtt ggggaagtag cgcttgtcaa acagcatcag
     2041 ccccggcccc tggcccagtt tcagcgggta tttaatgtta tcaatgcccg gaacatcgcc
     2101 tgcgacagcg gtatccagca cgatcactac atccggttta atgtgttccg ccgaggtttg
     2161 tgccccgcgt agcccaactt cttcttccac gctgccgacg ccatacagcg taatttcggg
     2221 attattcacc gtctgcaata gttcagccat cattgcgcag ccgatgcggt tatccagcgc
     2281 cttgccgacc actttatctt cgccccagca ggcaaaattg gcttccgggc taataaaatc
     2341 gcccatcgcc acaccgcgtt tttccacctc atcgcgactg tttgcgccaa tatcaatgaa
     2401 catctcatca aatgacagcg gccgttgcct ttgcttttcc gttaacgcat gaggcgcgac
     2461 ggaaccaatc acaccaggga ttttcactcc cttgtgtgtg cgtatggtta cccggtggtt
     2521 gagcatcgac tgattccacc agccaccaat ggtggtgaaa cgcagaaaac cgctctcgtc
     2581 gatgtgggtg accataaagc cgacttcatc catatgcccg acaacggcaa cttttggacc
     2641 tttattcccc ttacgggcaa caaagctgcc cagaccatca aaggtgatct cattaacgca
     2701 aggttccagc gtgtttatca gaatgtcgcg aacttcctgt tcatcgccgc tgacggcgct
     2761 ggcttcgcac aactgttgca gtaactcaat gttcatggac aagctcctgt tgcgcggctt
     2821 tcgctttgcg gcgtaaccac aatcctttca ggacgataat gaatgaaatg ttcagcgcga
     2881 ggccaatcgc cagcaccaga taaaacgaac ccaccggcga catcaggccg atcagcgggt
     2941 caaagatacc caaaccaggt gccagacgtt tgattccgaa agcgatcacc agcacgccgg
     3001 taatgccacc cgccagcgta ttggcggtaa tcatcggcaa cggagctgcc agagcgtaag
     3061 gtatagccgg ttcggttgcg actgtggcac cgaccacaat ggcactactg gcagcctctt
     3121 tttcctgtcg ggtaaacagt ttgggcgcaa tgaacgtcgc aagacccgcc gcaacgggcg
     3181 gcatcaacgc gacaacgccg acgatggcgt accagtcata aatgtgtttt tccagcagtg
     3241 agaagcagaa gaaccaggcg gttttattga tggggccgcc catatcgaac gccagcatcg
     3301 caccgaccag aaacgctgct gcaaacttca ttgatggagg aatggtattc aggaagtgga
     3361 gcagcccgcc catgaggtcg gacatcaccg gcccgataac gtagtaagtg agcacgccga
     3421 aaaccagcag agtaacgaac gggatcagca ttgaaccgag cagcggttgt aatgctttgc
     3481 caaggcgcac tttgcggaac cagaagacga aatagccaat cgccagcccc agcaccaccg
     3541 cgccgaggaa tcccgcaccc gactgggtgc cgagcagcgc tttgtcgttc gccagatagc
     3601 aaaccagaaa cgccggagcg aaagccggtt tatcggcaat cgacgaggca atataagcgc
     3661 ccatgatggg gatcataaag gtgaagccaa ggtaaccgat ggattcaact acccaggtaa
     3721 acgacggcgc gcctttcgac atatcggtat acggcaaacc gaactgcacc agcatgttgg
     3781 caagcgccac caggatacca ccgccgatga caaacggcag cgccgcagag acgcccgcca
     3841 tcaggtggct catcacgctg ccgctttgca tttcctgttt gccaagcttc acgccactat
     3901 ctgcggcaaa aagctgcgag tttgtcggta attcgctgaa aatctggtcg atatttttca
     3961 acgcctggga gatggcaatc tcataaactt tcttcccggt aaaccgcgcg cgatcatcac
     4021 cgctcaggcc acgcccggta gcgagaatga cgtaatcggc agcggcaatc tcttcgctgg
     4081 ataagcggtt ttcaacgcca ctggaccctt gagtttccac ttttatggta tggccgagag
     4141 aacgggcttt ctgttccagg gcttccgcca ccatgtaggt gtgagcgatc ccggcggggc
     4201 agttggtgat cgcgacaata cgtaaggatg actccatcgc cacttcctta tgagctgagg
     4261 gtttgattta acaaggcaag cacttggtcg gtatcgccct gttgcagttg atgaataaat
     4321 tccttgtgaa taattttgcg acacagtgtg ccgatgattt tgacctgatc ctcttcgccg
     4381 ctttgcggca cgccgaggca gatccagcaa ttgacgtctt cgccatcgct ggctttccag
     4441 tcaatagcct gcgctttgcg ggcgaataat acgaacggtt gtttaacgca ggcgctttta
     4501 ccgtgcggca cggcgacacc ggaaccaaat ccagtagagt gcattttttc gcgcagcagc
     4561 agggtttgca ggaactggtg tgagtcggtg ataaaaccgt tttgtaacgc tattgtcgcc
     4621 aactgcttca gaacggaata agcgccattg ccctgaatat tcaggtcaat acagcttgca
     4681 gtaagagctg ccattaatcg gactccataa aatatatttt aatcaattgt aatggtggag
     4741 cgattaagtg atgagaggcg atatgtcggt aaacaatgac aatttgagac agagtgaaag
     4801 gtcagatttg cggagtaatg cacataatgg ttatttaaat aaaccacatg aatcattaat
     4861 gggttattca ttatttttgt gatttactca caatgtatca gggaaatata acttaccggg
     4921 agatgtaata tgtttaattt ttcaaatcga aatttaaaat attgtgccgg aggcatctcc
     4981 ggcacattgg gcaattacgg caggtaaaac acttcttgc
//
LOCUS       DAJVUK010000214         4960 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.216, whole genome shotgun sequence.
ACCESSION   DAJVUK010000214 DAJVUK010000000
VERSION     DAJVUK010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4960
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.216"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..247)
                     /locus_tag="OQQ57_003953"
     CDS             complement(<1..247)
                     /locus_tag="OQQ57_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3029 family protein"
                     /protein_id="HCS1958512.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLAN"
     gene            505..1284
                     /gene="deoC"
                     /locus_tag="OQQ57_003954"
     CDS             505..1284
                     /gene="deoC"
                     /locus_tag="OQQ57_003954"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HCS1958513.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQTKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            1411..2733
                     /gene="deoA"
                     /locus_tag="OQQ57_003955"
     CDS             1411..2733
                     /gene="deoA"
                     /locus_tag="OQQ57_003955"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HCS1958514.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDARALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            2785..4008
                     /gene="deoB"
                     /locus_tag="OQQ57_003956"
     CDS             2785..4008
                     /gene="deoB"
                     /locus_tag="OQQ57_003956"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HCS1958515.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            4088..4807
                     /gene="deoD"
                     /locus_tag="OQQ57_003957"
     CDS             4088..4807
                     /gene="deoD"
                     /locus_tag="OQQ57_003957"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HCS1958516.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
BASE COUNT         1194 a         1262 c         1364 g         1140 t
ORIGIN      
        1 cgttcgccag aaaacgggcg taatcgggta agacatagcg cggtttgtac ggcgcatgac
       61 cttcaaacat atcgcagatt acaccctcat ccagcgcgcg gcgggcttcg gcaggaagct
      121 gcggataagg cagattgttt tctgcttcca gagccagaaa atggcgcttc tgctccgggc
      181 taagcactgg gctggtgaca atttgctggc aacgttgttg cagtgcattt tcatgagaag
      241 tgggcatctt cttttccttt tatgccgaag gtgatgcgcc attgtaagaa gtttcgtgat
      301 gttcactttg atcctgatgc gtttgccacc actgacgcat tcatttgaaa gtgaattatt
      361 tgaaccagat cgcattacag tgatgcaaac ttgtaagtag attaccttaa ttgtgatgta
      421 tatcgaagtg tgttgcggag tagatgttag aatactaaca aactcgcaag gtgaatttta
      481 ttggcgacaa gccaggagaa tgaaatgact gatctgaaag caagcagcct gcgtgcactg
      541 aaattgatgg acctgaccac cctgaatgac gacgacaccg acgagaaagt aattgctctg
      601 tgtcatcaga ccaaaactcc ggtcggcaat accgccgcta tctgtatcta tcctcgcttt
      661 atcccgattg ctcgcaaaac gctgaaagag cagggcaccc cggaaatccg aatcgctacg
      721 gtaaccaact tcccacacgg taacgatgac atcgaaatcg cgctggcaga aacccgtgcg
      781 gcaatcgcct acggtgctga tgaagttgac gttgtgttcc cgtaccgcgc gctgatggcg
      841 ggtaacgagc aggttggttt tgacctggtg aaagcctgta aagaggcttg cgcggcagcg
      901 aatgtactgc tgaaagtgat catcgaaacc ggcgaactga aagacgaagc gctgatccgt
      961 aaagcgtctg aaatctccat caaagcgggt gctgacttca tcaaaacctc taccggtaaa
     1021 gtggcagtga acgcgacgcc ggaaagcgcg cgcatcatga tggaagtgat ccgtgatatg
     1081 ggcgtagaaa aaaccgttgg tttcaaaccg gcgggcggcg tgcgtactgc ggaagatgcg
     1141 cagaaatatc tcgccatcgc agatgaactg ttcggtgctg actgggcaga tgcgcgtcac
     1201 taccgctttg gtgcttccag cctgctggca agcctgttga aagcgctggg ccacggtgac
     1261 ggtaagagcg ccagcagcta ctaagcaaga tgctttacgc ctgatgcgct gcgcttatca
     1321 ggcctacgag acgtatctac ccgtaggccg gataaggcgt agacgcatcc ggcaaaagcc
     1381 gcctcatact cttttcctcg ggaggttacc ttgtttctcg cacaagaaat tattcgtaaa
     1441 aaacgtgatg gtcatgcgct gagcgatgaa gaaattcgtt tctttatcaa cggcattcgc
     1501 gacaacacta tctccgaagg gcagattgcc gccctcgcga tgaccatttt cttccacgat
     1561 atgacaatgc ctgagcgtgt ctcgctgacc atggcgatgc gagattcagg aaccgttctc
     1621 gactggaaaa gcctgcatct gaatggcccg attgttgata aacattccac cggcggcgtc
     1681 ggcgatgtca cttcgctgat gttggggccg atggtcgcag cctgcggcgg ctatattccg
     1741 atgatctccg gtcgcggcct cggtcatact ggcggtacgc tcgacaaact ggaatccatc
     1801 cctggcttcg acattttccc ggatgacaac cgtttccgcg aaattattaa agacgtcggc
     1861 gtggcgatta tcggtcagac cagctcactg gctccggcgg ataaacgttt ctacgcgacc
     1921 cgtgatatta ccgcaaccgt ggactccatc ccgctgatca ctgcctcgat cctggcgaag
     1981 aaactggcgg aaggtctgga tgcgctggtg atggacgtga aagtgggtag cggcgcgttt
     2041 atgccgacct acgaactctc tgaagccctt gccgaagcga ttgttggcgt ggctaacggc
     2101 gctggcgtgc gcaccaccgc gctgctcacc gacatgaatc aggtactggc ctccagtgca
     2161 ggtaacgcgg ttgaagttcg tgaagcggtg cagttcctga cgggtgaata tcgtaacccg
     2221 cgtctgtttg atgtcacgat ggcgctgtgc gtggagatgc tgatctccgg caaactggcg
     2281 aaagatgacg ccgaagcgcg cgcgaaattg caggcggtgc tggacaacgg taaagcggca
     2341 gaagtctttg gtcgtatggt agcggcacaa aaaggcccga ccgacttcgt tgagaactac
     2401 gcgaagtatc tgccgacagc gatgctgacg aaagcagtct atgctgatac cgaaggtttt
     2461 gtcagtgaaa tggatgcccg cgcgctgggg atggcagtgg ttgcaatggg cggcggtcgt
     2521 cgtcaggcat ctgacaccat cgattacagc gtcggcttta ctgatatggc gcgtctgggc
     2581 gaccaagtag acggtcagcg tccgctggcg gttatccacg cgaaagacga aaacagctgg
     2641 caggaagcgg cgaaagcggt gaaagcggca attaaacttg ccgataaagc accggaaagc
     2701 acaccaactg tctatcgccg tatcagcgaa taacggtata ctgatctgat catttaaatt
     2761 tgaagcactg agtacggaga acatatgaaa cgtgcattta ttatggtgct ggactcattc
     2821 ggcatcggcg ctacagaaga tgcagaacgc tttggtgacg tcggggctga caccctgggt
     2881 catatcgcag aagcttgtgc caaaggcgaa gctgataacg gtcgtaaagg cccgctcaat
     2941 ctgccaaatc tgacccgtct ggggctggcg aaagcacacg aaggttctac cggtttcatt
     3001 ccggcgggaa tggacggcaa cgctgaagtt atcggcgcgt acgcatgggc gcacgaaatg
     3061 tcatccggta aagatacccc gtctggtcac tgggaaatcg ccggtgtccc ggttctgttt
     3121 gagtggggat acttctccga tcacgaaaac agcttcccgc aagagctgct ggataaactg
     3181 gtcgaacgcg ctaatctgcc gggttacctc ggtaactgcc actcttccgg tacggtcatt
     3241 ctggatcagc tgggcgaaga gcacatgaaa accggcaagc cgattttcta tacctccgct
     3301 gactccgtgt tccagattgc ctgccacgaa gaaacctttg gcctggataa actctacgaa
     3361 ctgtgcgaaa tcgcccgtga agagctgacc aacggcggct acaacatcgg tcgtgttatc
     3421 gctcgtccgt ttatcggtga caaagccggt aacttccagc gtaccggtaa ccgtcacgac
     3481 ttggctgttg agccgccagc accgaccgtg ctgcagaaac tggttgatga aaaacacggt
     3541 caggtggttt ctgtcggtaa aattgcagac atctacgcca actgcggtat caccaagaaa
     3601 gtgaaagcaa ctggcctgga cgcgctgttt gacgccacca tcaaagagat gaaagaagcg
     3661 ggtgataaca ccatcgtctt caccaacttc gttgacttcg actcttcctg gggccaccgt
     3721 cgcgacgtcg ccggttatgc tgcgggtctg gagctgttcg accgccgtct gccggagctg
     3781 atgtctttgc tgcgcgatga cgacatcctg atcctcactg ctgaccacgg ttgtgatccg
     3841 acctggaccg gtactgacca cacgcgtgaa cacattccgg tactggttta cggcccgaaa
     3901 gtaaaaccgg gttcactggg tcaccgtgaa accttcgcgg atatcggcca gactctggca
     3961 aaatattttg gtacttctga tatggaatat ggcaaagcca tgttctgata atgggtgcgg
     4021 cttgatgccc tcaccccggc cctctcccac agggagaggg tgaaaacatg ttgataagga
     4081 taaaacaatg gctaccccac acattaatgc agaaatgggc gatttcgctg acgtagtttt
     4141 gatgccaggc gacccgctgc gtgcgaagta tattgctgaa actttccttg aagatgcccg
     4201 tgaagtgaac aacgttcgcg gtatgctggg cttcaccggt acttacaaag gccgcaaaat
     4261 ttccgtaatg ggtcacggta tgggtatccc gtcctgctcc atctacacca aagaactgat
     4321 caccgatttc ggcgtgaaga aaattatccg cgtgggttcc tgtggcgcag ttctgccgca
     4381 cgtaaaactg cgcgacgtcg ttatcggtat gggtgcctgc accgattcca aagttaaccg
     4441 catccgtttt aaagatcatg actttgccgc tatcgctgac tttgacatgg tgcgtaacgc
     4501 ggtagacgcg gctaaagcac tgggcattga tgctcgcgtt ggtaacctgt tctccgctga
     4561 cctgttctac tctccggacg gcgaaatgtt cgacgtgatg gaaaaatacg gcatcctcgg
     4621 cgtggaaatg gaagcggctg gtatctacgg cgtcgctgca gaatttggcg cgaaagccct
     4681 gaccatctgt accgtgtctg accacatccg cactcacgag cagaccactg ccgctgagcg
     4741 tcagaccacc ttcaacgaca tgatcaaaat cgcactggaa tccgttctgc tgggcgataa
     4801 agagtaattg tgtttcgctg aaaggcgatt gtcgtgtgaa gccggagtgg gagactgctc
     4861 cggcttttta gtatctattc atcaatagca actgatttat agatttacta ttatttttca
     4921 tatggataga aaataaaatc tattcaagta tctattcacg
//
LOCUS       DAJVUK010000215         4852 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.217, whole genome shotgun sequence.
ACCESSION   DAJVUK010000215 DAJVUK010000000
VERSION     DAJVUK010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.217"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1250)
                     /locus_tag="OQQ57_003958"
     CDS             complement(<1..1250)
                     /locus_tag="OQQ57_003958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AGCS family amino acid carrier protein"
                     /protein_id="HCS1958517.1"
                     /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG
                     KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPRAVFWMWVAAFIG
                     MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG
                     VQANAVARALSFSFDFPPLVTGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLT
                     SMVICVINIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG
                     STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQ
                     LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNTPKAIWCLRIC
                     TFATVIGGTLLSLPLMWQLADIIMA"
     gene            1529..2482
                     /gene="tal"
                     /locus_tag="OQQ57_003959"
     CDS             1529..2482
                     /gene="tal"
                     /locus_tag="OQQ57_003959"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCS1958518.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPTLLKELAESEGAIERKLSYTGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            2597..3184
                     /gene="mog"
                     /locus_tag="OQQ57_003960"
     CDS             2597..3184
                     /gene="mog"
                     /locus_tag="OQQ57_003960"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HCS1958519.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSVLTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(3219..3785)
                     /gene="satP"
                     /locus_tag="OQQ57_003961"
     CDS             complement(3219..3785)
                     /gene="satP"
                     /locus_tag="OQQ57_003961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HCS1958520.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YSGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="OQQ57_003962"
     CDS             complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="OQQ57_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HCS1958521.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAFDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            complement(4673..>4852)
                     /locus_tag="OQQ57_003963"
     CDS             complement(4673..>4852)
                     /locus_tag="OQQ57_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HCS1958522.1"
                     /translation="ARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT
                     VNSSDMATLKIIGDD"
BASE COUNT         1275 a         1250 c         1228 g         1099 t
ORIGIN      
        1 gccattatga tatctgccag ttgccacatc agcggaaggc ttagcaaggt gccgccgatg
       61 accgttgcga aggtgcagat ccgcaaacac cagatcgctt taggggtgtt caggcgtaaa
      121 aagaagagat tgttttcggc ataaatgtag ttggcaacga tggagctgaa ggcaaacaga
      181 ataaccacga gggtaacaaa ctcagcaccc caggaaccca ttagcacccg catcgccttc
      241 tggataagct gaataccttc cagcggcatg taggttgtgt cgttacccgc cagtaatatc
      301 agcatggcgc ttgccgtaca gatgaccagg gtgtcgataa aaatgccaat catctggaca
      361 atcccttgcg ctgccggatg cggaggccag gacgccgctg ccgctgccgc gtttggcgtc
      421 gaacccattc ccgcctcatt ggaaaacata ctgcgctgaa aaccgttagt aatcgcctgg
      481 cttaaggtat atcccgccgc gccgcctgcc gcttcctgcc agccaaaagc actctcaaaa
      541 atagaccaaa tgacgtgggg aagttgcccg atatttatta cgcaaatcac catgctggtc
      601 agcacccaga ttatcgccat caacgggaca aacccctgca tgagccgggc gacgccatga
      661 agaccgcgag tgattgccag cagagcaaag acagcgagaa taatgcctgt caccagcggg
      721 ggaaaatcaa aagaaaaact cagggctcgg gcaacggcgt tcgcctgaac tccgctgaaa
      781 attatgccgt aggcgatgag caaaaagacg gcgaacagaa cgcccatcca acgcatcccc
      841 agcccgcgcg ccatatacca tgccggtccg ccacgaaact gcccattgac gtcacgttct
      901 ttataaagtt gtgcaaggga acattcggca aacgaggtcg ccatgccgat aaacgcggca
      961 acccacatcc aaaagacggc tctaggtcca ccggcggtaa tagccagcgc aacgccggcc
     1021 aggttgccgc tacccacgcg cgccgcaaga ctggtacaca atgactgaaa tgaggttaaa
     1081 ccgcctggct gtggatgaat gctattttta agacttttgc caaactggcg gatgtagcga
     1141 aactgcacaa atccggtgcg aaaagtgaac caacaacctg cgccgaagag caggtaaatc
     1201 attaccgatc cccaaaggac gctgttaata aaggagaaaa aatctggcat gcatatccct
     1261 cttattgccg gtcgcgatga ctttcctgtg taaacgttac caattgttta agaagtatat
     1321 acgctacgag gtacttgata acttctgcgt agcatacatg aggttttgta taaaaatggc
     1381 gggcgatatc aacgcagtgt cagaaatccg aaacagtctc gcctggcgat aaccgtcttg
     1441 tcggcggttg cgctgacgtt gcgtcgtgat atcatcaggg cagaccggtt acatccccct
     1501 aacaagctgt ttaaagagaa atactatcat gacggacaaa ttgacctccc ttcgtcagta
     1561 caccaccgta gtggccgaca ctggggacat cgcggcaatg aagctgtatc aaccgcagga
     1621 tgccacaacc aacccttctc tcattcttaa cgcagcgcag attccggaat accgtaagtt
     1681 gattgatgat gctgtcgcct gggcgaaaca gcagagcaac gatcgcgcgc agcagatcgt
     1741 ggacgcgacc gacaaactgg cagtaaatat tggtctggaa atcctgaaac tggttccggg
     1801 tcgtatctca actgaagttg atgcgcgtct ttcctatgac accgaagcgt caattgcgaa
     1861 agcaaaacgc ctgatcaaac tctacaacga tgctggtatt agcaacgatc gtattctgat
     1921 caaactggct tctacctggc agggtatccg tgctgcagaa cagctggaaa aagaaggcat
     1981 caactgtaac ctgaccctgc tgttctcctt cgctcaggct cgtgcttgtg cggaagcagg
     2041 cgtgttcctg atctcgccat ttgttggccg tattcttgac tggtacaaag cgaatactga
     2101 taagaaagag tacgctccgg cagaagatcc gggcgtggtt tctgtatctg aaatctacca
     2161 gtactacaaa gagcacggtt atgaaaccgt ggttatgggc gcaagcttcc gtaacatcgg
     2221 cgaaattctg gaacttgcag gctgcgaccg tcttaccatc gcacctacac tgctgaaaga
     2281 gctggctgag agcgaagggg ctatcgaacg taaactgtct tacaccggcg aagtgaaagc
     2341 gcgtccggcg cgtatcactg agtccgagtt cctgtggcag cacaaccagg atccaatggc
     2401 agtagataaa ctggcggaag gtatccgtaa gtttgctatt gaccaggaaa aactggaaaa
     2461 aatgatcggc gatctgctgt aatcattctt agcgtgaccg ggaagtcggt cacgctacct
     2521 cttctgaagc ctgtctgtca ctcccttcgc agtgtatcat tctgtttaac gagactgttt
     2581 aaacggaaaa atcttgatga atactttacg tattggctta gtttccatct ctgatcgcgc
     2641 atccagcggc gtttatcagg ataaaggcat ccctgcgctg gaagaatggc tgacatcggt
     2701 gctaaccacg ccgtttgaac tggaaacccg cttaatcccc gatgagcagg cgatcatcga
     2761 gcaaacgttg tgtgagctag tggatgaaat gagttgccat ctggtgctca ccacgggcgg
     2821 aactggcccg gcgcgtcgtg acgtaacgcc cgatgcgacg ctggcagtag cggaccgcga
     2881 gatgcctggc tttggtgaac agatgcgcca gataagcctg cattttgtac caactgcgat
     2941 cctttcgcgt caggttggtg tgattcgcaa acaggcgctg atccttaact tacccggtca
     3001 gccgaagtct attaaagaga cgctggaagg tgtgaaggac gctgcgggta acgttgtggt
     3061 acacggtatt tttgccagcg taccgtactg cattcagttg ctggaagggc catacgttga
     3121 aacggcacca gaagtggttg ctgcattcag accgaagagt gcaagacgcg acgttagcga
     3181 ataaaaaaat ccccccgagc ggggggatct caaaacaatt agtgggattc accaatcggc
     3241 agaacggtgc gaccaaactg ctcgttcagt acttcaccca tcgccagata gattgcactg
     3301 gcaccacaga tcagaccaat ccagccggca aagtggatga ttgcggcgtt accggcaatg
     3361 ttaccgatcg ccagcagggc aaacagcaca gtcaggctaa agaaaacgaa ttgcagaacg
     3421 cgtgcgcctt tcagcgtgcc gaagaacata aacagcgtaa atacgcccca cagacccagg
     3481 tagacaccaa ggaactgtgc atttggcgca tcggtcagac ccagtttcgg catcagcaga
     3541 atcgcaacca gcgtcagcca gaaagaaccg taagaggtga atgcggttaa accgaaagtg
     3601 ttgccttttt tgtactccag cagaccagca aaaatttgcg cgatgccgct gtagaaaatg
     3661 cccatggcaa gaataatacc gtccagagcg aaataaccca cgttgtgcag gttaagcaga
     3721 atggtggtca tgccgaagcc catcaggccc agcggtgccg gattagccaa cttagtgttg
     3781 cccataattc ctcaaaaatc atcatcgaat gaatggtgaa ataatttccc tgaataactg
     3841 tagtgttttc agggcgcggc ataataatca gccagtgggg cagtgtctac gatcttttga
     3901 ggggaaaatg aaaattttcc ccggtttccg gtatcagacc tgagtggcgc taaccatccg
     3961 gcgcaggcag gcgatttgca gtacggctgg aatcgtcacg cgataggcgc tgccgctgac
     4021 cgctttaacc ccatttagtg ccgcacctac agggcctccc agccccgcgc cgcgcagcaa
     4081 accatgccca agtacgctca ttgctgcgtg ggtgcgtaaa atgcgggtca gttggctgga
     4141 aagcaaatgc gacacgcctt ttgccaataa tttgtctttc atcagcagcg gcagcagctc
     4201 ttccagctca ttcaccctcg catcgaacgc gtgcagaaac tcctgcttat gttcctcgtc
     4261 cattttcttc caggtattac gcagaaattg ttccagtaac tgttgctcaa tttcaaacgt
     4321 agacatctct ttgtcggctt tcagcttcaa tcgttttgaa acatcgagca aaatggcccg
     4381 atacaattta ccgtgtccgc gcagtttgtt ggcgatacta tcgccaccaa aatgctgtaa
     4441 ttctccagca atcagctgcc agttgcggcg atgttgctcg ggatgccctt ccatcgattt
     4501 aaacagttcg ttgcgcatca gtacgctgga gaggcgagtt ttgccttttt cattatgggt
     4561 gagcaatcgg gcgaaatttg ccaactgttc ctcactacaa tgctgaagaa aatccagatc
     4621 tgaatcattc aggtaattaa cattcatttt ttgtggcttc tatattctgg cgttagtcgt
     4681 cgccgataat tttcagcgtg gccatatccg atgagttcac cgtatgaccg gaaaaggtga
     4741 tttttgagac gcagcgttta ttgtcgttat cactgttaat gttgatccag tcagtggttt
     4801 gcccttcttt tatttctgaa ggaatattca gactctgact ggcgctacgg gc
//
LOCUS       DAJVUK010000216         4823 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.218, whole genome shotgun sequence.
ACCESSION   DAJVUK010000216 DAJVUK010000000
VERSION     DAJVUK010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4823
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.218"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..4049)
                     /locus_tag="OQQ57_003964"
     CDS             complement(<1..4049)
                     /locus_tag="OQQ57_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HCS1958523.1"
                     /translation="MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGG
                     MLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIA
                     EGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALG
                     KLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKAYSMALGASSVASEEN
                     AIALGRSSVASGTDSLAFGRQSLASAANAIAIGAETEAAENATAIGNNAKAKGTNSMA
                     MGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIALGNGSQSRGLNTIALG
                     TASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAI
                     KSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
                     LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVE
                     ANTANIATNTSNIATNTANIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQD
                     TTSKITNVKDADLTADSTDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLT
                     ETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVKDGDLTTGSTDAVNGSQLKTTND
                     AVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDG
                     TVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALA
                     AINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLH
                     GVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADA
                     GENGAFSAAHGKDKTASVITNVANGAISAASRDAINGSQLYTTNKYIADALDGDAEVN
                     ADGTITAPTYTIANAEYNNVGDALDALDDNALLWDETANGGAGAYNASHDGKASIITN
                     VANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTN
                     DDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSRVIA
                     KGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQ
                     NAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDANAL
                     NGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQ
                     ITNVAAGSADTDAVNVGQLKVTDERVAQNT"
     gene            complement(4093..4776)
                     /locus_tag="OQQ57_003965"
     CDS             complement(4093..4776)
                     /locus_tag="OQQ57_003965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HCS1958524.1"
                     /translation="MNLKKIFFSAVTVSVLCALTGCDYIEEGKPESSLLKQQEEHNNK
                     IDLLEKQQAQLKSQLETIQKQQTGIISSTKTLTHVIKSVKDQQNTFIFTEFNPAKTKY
                     FILNNGSVALAGRVLSIDATENGSVIHISLVNLLSTPISNIGFNATWGGEKPVDAKEF
                     ARWQQLLFNTSMKSTLKLLPGQWQDINLTLKGVSPNNLGYLKLAINMENIQFDNLPSA
                     ENRQKRSKK"
BASE COUNT         1097 a         1191 c         1134 g         1401 t
ORIGIN      
        1 gtattttgcg ctacgcgctc atcagtgact ttcaactgac ccacgttaac cgcatcggta
       61 tccgctgaac cagctgcgac gtttgtgatc tgacgttgac catccgcact accgactgag
      121 aattcaccga cagagttctg cggtgcgtcc atgttgtagg cggtataatt ggtttgagcg
      181 ccacgagtgg tcgtagaacc attacctatc gcaatactgt tgacatgaat gacttgcgca
      241 ttgctaccaa tggcaatgcc gttaagtgca ttcgcgtcca cgtaggcacc ataaccgata
      301 ccaatacctt tatcgccatt cacgatggtt ttcgcaccca ttgccagcga gtcagttccc
      361 actgccagtg aatcttcttc cgttgaatta gcgtggaagt atttagtcgg cgtggttgcg
      421 accgcaccaa tcgcattctg caattgacga accgtaacgg cgtcatgggc ttcggaacca
      481 tcggctacgt tgatgatttg acgatattta ccgtcatcac cgatagacaa tgcaccgagc
      541 agttcgccat ccgtggtgtc gtaaccaata acaacgccat tttccgttat gctggtgtca
      601 cgggagcctt tggcaatcac tcggctggaa acagagctgc tacctagggc gatacccgta
      661 tcaacgtcgc tgtagctgcc ctgaccaata gctacgctgc tatcgccttt ggcgacagag
      721 ttataaccta tagctgtagc gccaacaccc tgtgcgctgg cgtcgttgaa cgctaagccg
      781 tcgtcgttag tacgcacata gttaataccc gcaccgtttt cttggatata ggttgcgtcg
      841 gtgttaccag cgagctgatt gataatttgg gtgttctgct caatcatcat attcgtcgca
      901 ttcaactgag aaccgttcac tgcatcggta ctgtcctcac taatactgcc attagcgaca
      961 ttagtgatga tgctggcttt accgtcatgg ctggcattgt aggctccagc accgccattg
     1021 gcagtctcat cccacagcag ggcgttatca tcaagcgcat ccagagcgtc accgacgttg
     1081 ttgtactcgg cgttcgcaat ggtgtaagtc ggtgcggtga tggtgccgtc agcgttgact
     1141 tctgcgtcac catccagcgc atcagcgatg tacttattgg tggtatagag ttgtgagccg
     1201 ttaatcgcgt ctctgctggc agcagagatt gcaccgttag cgacgttagt gattacactg
     1261 gcagttttat cttttccgtg agcggcgcta aatgcaccat tttcaccggc gtccgcatcc
     1321 cagagcagag cgtcgtcaag agtggtatcg atagcattca gggcatcacc gacattatcg
     1381 taatcagcat tagcaatggt gtacgtcggc gcagtgatgg tgccgtctgc attgacttcg
     1441 gcaccacccc ccagcgcatc aacaacataa ctgctcacgc cgtggagttg tgagccgttt
     1501 actgcgtcag aactggagtc tgaaatttca ccatctgcga catcagtgat cacgcttgcg
     1561 tcaccattag taccgtgttt ggcactgaat ttacctgcgg tggcatccca aagcagagca
     1621 tcgccgagag acgtgctaaa tgaggagtta atcgcagcca gtgcatcgcc gacgttataa
     1681 taatttgttt caccgatttt gtaggttgga ccggtaaaca caccgtcagt attcacagaa
     1741 gcattgccgc cgaagtaggt ggcgatattg ctgcttaagt cataaagctg gctaccgtta
     1801 atggcatcgg aactggttgc agtgactgtg ccgtccagga tattggtgat tttgctggcg
     1861 gtattgttgc catgagctgc agtgaagaca ccattgtcct tatcccattt cagcgcatcc
     1921 tcaccaagat tagtcaccgt ctcagtcaga ttagagatgt tggtggtgtt agtggcgata
     1981 ttggtggtat tcgtcgccac ggcatcgttg gtggttttca gctgagagcc gttaacggca
     2041 tcggtgctgc cagtcgtcag gtcgccatct ttaacgttgg tgattttgct ggtggtctcg
     2101 gtgccatgag ctgccgtgaa tacaccattg tccttatccc atttcagcgc atcctcacca
     2161 agattagtca ccgtctcagt cagattagag atgttggtgg tgttagtggc aatattggaa
     2221 gtgttattgg cgatattggt ggtattcgtc gccacagcat cgttggtggt tttcagctga
     2281 gagccgttaa cagcatcagt gctgtcagcc gtcaggtcgg catctttaac gttggtgatt
     2341 ttgctggtgg tatcctggcc gtgagctgca ctgaatgcct ttttagtttc gttccagagc
     2401 agggcatcag cctgaaggtc accaacggaa tccgtcaggt tggtgatatt ggtggtattg
     2461 gtggcaatat ttgccgtatt cgtggcaatg ttgctggtat tagtagcgat attggcggtg
     2521 ttggcttcga catcgtcatt ggtagctttc agttgggaac cgttaaccgc atccttactg
     2581 gaggctgaaa tcgtgccatc cgcaacatcg gtgattacgc tggcagttgg gctactagta
     2641 ccatgagcag cgctgtattt gcctttggtt tggtcccatt gcagggtgtt ttcatcaagt
     2701 acagcgagcg cagcccctac gttatttttg ctaccatttt ttaaattgta ggttggtgct
     2761 gtaacagtac cgtcatcaac atctactgca gcccctcctc caagcctttt tgctaccgag
     2821 tcgctaatgg cataaagctg tgaaccatta atggcatcgt aactgtcaga cttgatcgcg
     2881 ccatttttca cattaacgat cttgcgtttt aatgaactat tgccgacaga gacggtattg
     2941 tctaaatccg caatggaatc tgcgcccagc gcgacagagt taataccgtt ggcactgcta
     3001 ttactaccaa gcgcaagact cttatcacca gttgcattac tggctgtgcc taaggcaatg
     3061 gtgtttaagc ctctcgactg gctaccatta cccagagcga tggcatccac gccatcagct
     3121 ttgttgccct ggcctatggc gattgcatta tctgccagag cctggctgcc atttcctaat
     3181 gcgatagtat tgactttatc ggcaaggctt ccgaacccca ttgccatgct attagtccct
     3241 tttgccttcg cattattgcc aatagcagtt gcattttcag cggcttcggt ctcagcacct
     3301 atcgcaatag cgttcgctgc gctggcaagt gattgtctgc caaatgcgag gctgtcagta
     3361 ccgctagcta cactgctacg ccccagggca attgcgtttt cttcagatgc gacgctactt
     3421 gctcccagcg ccattgaata cgcttttgac gcattggcgg tgtcgccaag agcaatactc
     3481 ataatctcag tagctttagt ggcatttccc agggcaatgg cgtttgctcc ttccgctttg
     3541 gaagagtccc ccatagcaat agacaattta cccaatgctt ttgaataacg gccgagggcc
     3601 attgagtatt ggcccaatga atacgaagag gcacccagtg ctatacttct atcgccttct
     3661 gatattgcac taaccccaaa ggccattgat gcaccaccaa tcgcatgggt ttttgacccg
     3721 atggcagagc tatattggcc ttcagctata gcgtcataac ccacagcagt actggaacca
     3781 ctggtgttca taaaagtatt tgctttcgcc cctttgccta tagcaaccca gccgtcgcca
     3841 gctgatccac taccgtaatc aacaccctga ccgttgtcat tcccggcatt cgccaatgcc
     3901 ccaaacgacg acaacattcc acccgcaacc agcgcagaaa ttaacagctt actgcgccca
     3961 gatttcttgc cacggctttt tgccgtttcg ctggtaacag tataattccc tgtcgcaggg
     4021 ttccagataa ctttaaatat tttgttcatt aatgatgctc gctattcctt gttataagtg
     4081 tactaactgc atttattttt tgcttctttt ctgccgattt tcagcagagg gaagattgtc
     4141 gaactgaata ttttccatgt tgatggctaa cttcagatat cccaggttat tgggcgagac
     4201 acccttcagg gtcaaattaa tgtcttgcca ttgacctggt aataatttca atgtggattt
     4261 cattgatgtg ttgaaaagta attgttgcca ccgggcaaac tctttggcat cgacaggttt
     4321 ttcaccaccc catgtcgcat taaaaccaat atttgagata ggtgtactta ataagttgac
     4381 cagtgaaata tgaataacac tgccattctc tgtggcgtca atggataaca ctcgacccgc
     4441 taaagccacc gaaccattgt tcaggatgaa atacttcgtt tttgctgggt taaactcggt
     4501 aaaaataaaa gtgttttgtt gatctttaac ggatttaatt acgtgagtta aagtctttgt
     4561 actgcttatt atgccagttt gttgtttttg aatagtttcc agttgactct ttagctgtgc
     4621 ttgttgtttt tcaagtagat caattttatt gttatgttct tcttgttgtt tcaataaact
     4681 actttctggc ttgccttctt caatgtagtc acatcccgtt aatgcgcaga gaactgaaac
     4741 agtgacagca ctgaaaaaaa tcttcttcaa gttcatgtaa aaatccttat ttcctccgac
     4801 cagcgatcaa tgccggtaga gtt
//
LOCUS       DAJVUK010000217         4796 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.219, whole genome shotgun sequence.
ACCESSION   DAJVUK010000217 DAJVUK010000000
VERSION     DAJVUK010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.219"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..801
                     /locus_tag="OQQ57_003966"
     CDS             <1..801
                     /locus_tag="OQQ57_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HCS1958525.1"
                     /translation="QSITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVD
                     ANAQGKDSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSSTNQRRITNVAAGVNAT
                     DAVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGSTTRISNVSAGVNNNDAVNY
                     AQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYTPGASMASI
                     GGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW"
     gene            1169..2824
                     /gene="lldP"
                     /locus_tag="OQQ57_003967"
     CDS             1169..2824
                     /gene="lldP"
                     /locus_tag="OQQ57_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HCS1958526.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            2824..3600
                     /gene="lldR"
                     /locus_tag="OQQ57_003968"
     CDS             2824..3600
                     /gene="lldR"
                     /locus_tag="OQQ57_003968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HCS1958527.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
     gene            3597..4787
                     /gene="lldD"
                     /locus_tag="OQQ57_003969"
     CDS             3597..4787
                     /gene="lldD"
                     /locus_tag="OQQ57_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HCS1958528.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
                     GNAA"
BASE COUNT         1055 a         1274 c         1301 g         1166 t
ORIGIN      
        1 cagagcatta ctaacctgaa caatcaggtc actaatctgg atactcgcgt tactaatatc
       61 gaaaacggta ttggcgacat tgtcaccacc ggtagcacca agtacttcaa gaccaacacc
      121 gatggcgtag atgccaacgc ccagggtaaa gatagcgttg ctattggttc tggttccatt
      181 gctgccgctg acaacagcgt cgcactgggt accggttccg ttgcagagga agaaaataca
      241 atctctgtag gttcttctac taaccaacgc cgtatcacca acgtagctgc cggtgttaat
      301 gccaccgatg cggttaacgt gtcgcagctg aaatcttctg aagcaggcgg cgtgcgctac
      361 gacaccaaag ctgatggttc tatcgactat agcaatatca ccctcggtgg tggcaacggc
      421 agtacgactc gtatcagcaa cgtctccgct ggcgtcaaca acaacgacgc ggtgaactac
      481 gcgcagttga agcaaagcgt gcaggaaacg aagcaataca ccgatcagcg gatggttgag
      541 atggataaca aactgtctaa aactgaaagc aagttgagcg gtggtatcgc ttctgcaatg
      601 gcaatgaccg gtctgccgca ggcttataca ccgggtgcca gcatggcttc tattggtggc
      661 ggtacttaca acggtgaatc ggcagttgct ttaggtgtat cgatggtgag cgccaatggt
      721 cgttgggtct acaaattaca aggtagtacc aatagccagg gtgaatactc cgccgcactc
      781 ggtgccggta ttcagtggta atgatccatt aagttagtgt gactaagggc aaacgccaaa
      841 ttgcctgatg cgttacgcgc atcaggcaag ataaggcgct ccgggtcaac aatctaaggg
      901 caattctctg atgaggattg cccttttctt taccagacat ctccccccac aagaattggc
      961 cctaccaatt cttcgcttat ctgacctctg gttcacaatt ccccaattaa aactcacatc
     1021 aatattgcca atacacaaca tttagttaac cattcattgt cattatccct acacaacaca
     1081 attggcagtg ccacttttac acaacgtgtg acaaggagat gagcaacaga ctcattacac
     1141 gatgtgcgtg gactccagga gacctgcaat gaatctctgg caacaaaact acgatcccgc
     1201 cgggaatatc tggctttcca gtctgatagc atcgcttccc atcctgtttt tcttctttgc
     1261 gctgattaag ctcaaactga aaggatacgt cgccgcctca tggacggtag caatcgccct
     1321 tgccgtggct ttgctgttct ataaaatgcc ggtcgctaac gcgctggcct cggtggttta
     1381 tggcttcttc tatggtttgt ggcccatcgc gtggatcatt attgcagcag tgttcgtcta
     1441 taagatctcg gtgaaaaccg ggcagtttga catcattcgc tcgtctattc tttcgataac
     1501 ccctgaccag cgtctgcaaa tgctgatcgt cggtttctgt ttcggcgctt tccttgaagg
     1561 agccgcaggc tttggcgcac cggtagcaat taccgccgca ttgctggtcg gcctgggttt
     1621 taaaccgctg tacgccgccg gactgtgcct gattgttaac accgcgccag tggcatttgg
     1681 cgcgatgggc attccaatcc tggttgccgg acaagtaaca ggcatcgaca gttttgagat
     1741 tggccagatg gtggggcgtc agctaccgtt tatgaccatt atcgtgctgt tctggatcat
     1801 ggcgattatg gacggctggc gcggtatcaa agagacgtgg cctgcggtcg tggttgcggg
     1861 cggctcgttt gccatcgctc agtaccttag ctccaacttc attgggccgg agctgccgga
     1921 catcatctct tcgctggtat cactgctctg cctgacgctg ttcctcaaac gctggcaacc
     1981 agttcgcgta ttccgcttcg gtgacttggg ggcgtcacag gttgatatga cgctggccca
     2041 caccggttac accgcgggtc aggtgttacg tgcctggaca ccgttcctgt tcctgaccgc
     2101 taccgtaaca ctgtggagca tcccgccgtt taaagccctg ttcgcatcgg gtggtgcgct
     2161 gtatgagtgg gtgatcaaca ttccggtgcc gtacctcgat aaactggttg cccgtatgcc
     2221 accagtggtc agcgaggcta cagcctatgc cgccgtgttt aagtttgact ggttctctgc
     2281 caccggcacc gccattctgt ttgctgcact gctctcgatt gtctggctga agatgaaacc
     2341 gtctgacgct atcagcacct tcggcagcac gctgaaagaa ctggctctac ccatctactc
     2401 catcggcatg gtgctggcgt tcgcctttat ctcgaactat tccggactgt catcaacact
     2461 ggcactggca ctggcgcaca ccggtcatgc attcaccttc ttctcgccgt tcctcggctg
     2521 gctgggggta ttcctgaccg ggtcggatac ctcatctaac gccctgttcg ccgcgctgca
     2581 agccaccgca gcacaacaaa ttggcgtctc tgatctgttg ctggttgccg ccaataccac
     2641 cggtggcgtc accggtaaga tgatctcccc gcaatctatc gctatcgcct gtgcggcggt
     2701 aggcctggtg ggcaaagagt ctgatttgtt ccgctttact gtcaaacaca gcctgatctt
     2761 cacctgtatg gtgggcgtga tcaccacgct tcaggcttat gtcttaacgt ggatgattcc
     2821 ttaatgattg ttttacccag acgcctgtca gacgaggttg ccgatcgtgt gcgggcgctg
     2881 attgatgaaa aaaacctgga agcgggcatg aagttgcccg ctgagcgcca actggcgatg
     2941 caactcggcg tatcacgtaa ttcactacgc gaggcgctgg caaaactagt gagcgaaggc
     3001 gtgctgctca gtcgacgcgg cggcgggacg tttattcgct ggcgtcatga cacatggtcg
     3061 gagcaaaaca tcgtccagcc gctaaaaacg ctgatggccg atgatccgga ttacagtttc
     3121 gatattctgg aagcccgcta cgccattgaa gccagcaccg catggcatgc ggcaatgcgc
     3181 gccacacctg gcgacaaaga aaagattcag ctttgctttg aagcaacgct aagtgaagac
     3241 ccggatatcg cctcacaagc ggacgttcgt tttcatctgg cgattgccga agcctcacat
     3301 aacatcgtgc tgctgcaaac catgcgcggt ttcttcgatg tcctgcaatc ctcagtgaag
     3361 catagccgtc agcggatgta tctggtgcca ccggtttttt cacaactgac cgaacaacat
     3421 caggctgtca ttgacgccat ttttgctggt gatgccgacg gggcgcgtaa agcaatgatg
     3481 gcgcacctta gttttgttca caccaccatg aaacgattcg atgaagatca ggctcgccac
     3541 gcacggatta cccgcctgcc cggtgagcat aatgagcatt cgagggagaa aaacgcatga
     3601 ttatttccgc agccagcgat tatcgcgccg cagcgcaacg cattctgccg ccgttcctgt
     3661 tccactatat ggatggtggt gcatattctg aatacacgct gcgccgcaac gtggaagatt
     3721 tgtcagaagt ggcactgcgc cagcgtattc tgaaaaacat gtccgactta agcctggaaa
     3781 cgacgctgtt taatgagaaa ttgtcgatgc cggtagcact ggcaccggtg ggtttgtgtg
     3841 gcatgtatgc gcgtcgtggc gaagttcagg cagccaaagc ggcggacacg catggcattc
     3901 cgtttactct ctcgacggtt tccgtttgcc cgattgaaga agtcgcgcca gccatcaagc
     3961 gcccaatgtg gttccagctt tatgtactgc gcgatcgcgg ctttatgcgt aacgcgctgg
     4021 agcgagcaaa agcagcgggt tgttcgacgc tggttttcac cgtggatatg ccgacaccgg
     4081 gcgcacgcta ccgtgatgcg cattcaggta tgagcggccc aaatgcggca atgcgccgct
     4141 acttgcaggc ggtgacgcat ccgcaatggg cgtgggatgt gggcctgaac ggtcgtccac
     4201 atgatttagg taatatctca gcttatctcg gcaaaccaac cggactggaa gattacatcg
     4261 gctggctggg gaataacttc gatccgtcca tctcatggaa agaccttgag tggatccgcg
     4321 atttctggga tggcccgatg gtgatcaaag ggatcctcga tccggaagat gcgcgcgatg
     4381 cagtacgttt tggtgctgat ggaattgtgg tttctaacca cggtggccgc cagctggacg
     4441 gtgtactctc ttccgctcgt gcgttgcccg ctattgcaga tgcggtgaaa ggtgatatcg
     4501 ccattctggc ggatagcgga attcgtaacg ggcttgatgt cgtgcgtatg attgcgctcg
     4561 gtgccgacac cgtactgctg ggtcgtgctt tcctgtatgc gctggcaaca gcgggccagg
     4621 cgggtgtagc taacctgcta aatctgatcg aaaaagagat gaaagtggcg atgacgctga
     4681 ctggcgcgaa atcgatcagt gaaattacgc aagattcgct ggtgcaaggg ctgggtaaag
     4741 agttgcctgc ggcactggct cccatggcga aagggaatgc ggcatagtcg tttgcg
//
LOCUS       DAJVUK010000218         4777 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.220, whole genome shotgun sequence.
ACCESSION   DAJVUK010000218 DAJVUK010000000
VERSION     DAJVUK010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4777
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.220"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            391..1365
                     /gene="hemB"
                     /locus_tag="OQQ57_003970"
     CDS             391..1365
                     /gene="hemB"
                     /locus_tag="OQQ57_003970"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HCS1958529.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1471..2322)
                     /gene="tauD"
                     /locus_tag="OQQ57_003971"
     CDS             complement(1471..2322)
                     /gene="tauD"
                     /locus_tag="OQQ57_003971"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HCS1958530.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGITAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
                     EALLGFLFAHITKPEFQVRWRWQPNDIAIWDNCVTQHYANADYLPQRRIMHRVTILGD
                     KPFYRAG"
     gene            complement(2337..3146)
                     /gene="tauC"
                     /locus_tag="OQQ57_003972"
     CDS             complement(2337..3146)
                     /gene="tauC"
                     /locus_tag="OQQ57_003972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HCS1958531.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTP"
     gene            complement(3143..3910)
                     /gene="tauB"
                     /locus_tag="OQQ57_003973"
     CDS             complement(3143..3910)
                     /gene="tauB"
                     /locus_tag="OQQ57_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HCS1958532.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
                     MQRLEIAHQVLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA
                     RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
     gene            complement(3923..>4777)
                     /gene="tauA"
                     /locus_tag="OQQ57_003974"
     CDS             complement(3923..>4777)
                     /gene="tauA"
                     /locus_tag="OQQ57_003974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1958533.1"
                     /translation="KVAQAGNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGS
                     SPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLL
                     AALKHWGIKLGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQV
                     GQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLAR
                     LSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQ
                     YVTSRFVQ"
BASE COUNT         1134 a         1377 c         1196 g         1070 t
ORIGIN      
        1 gtggacatat ataatttatg gagaaaaaca cgcatcaaat tgataaaagg acgatatttc
       61 aacatgttgc agataatgtt atttttgata catacgcgtt ataaatatca aaaacacaaa
      121 ccagataaat atcttatcaa tatacaacaa agtttgaatt attcaattta tagcagcaca
      181 accaaacgca aaaaaaaata ataaccaaga gctataaata aagattaaaa atattttcag
      241 tgaatatgaa cttattgcta tttctattac aaagatgtcc tggtctctct ttcattctct
      301 tcttgtcaac atcacgacaa ctttcgtaaa acactcctgc cccgcttcag gtatactgtg
      361 caccttaatt ccacaaacat caggcagacc atgacagact taatccaacg ccctcgtcgc
      421 ctgcgcaaat ctcctgcgct gcgcgctatg tttgaagaga caacacttag ccttaacgac
      481 ctggtgttgc cgatctttgt tgaagaagaa attgacgact acaaagccgt tgaagccatg
      541 ccaggcgtga tgcgcattcc agagaaacat ctggcacgcg aaattgaacg catcgccaac
      601 gccggtattc gttccgtgat gactttcggc atctctcacc ataccgatga aaccggcagc
      661 gacgcctggc gggaagatgg actggtggcg cgtatgtcgc gcatctgcaa gcagactgtg
      721 ccagaaatga tcgtcatgtc agacacttgt ttctgtgaat acacttctca cggtcactgc
      781 ggtgtgctgt gcgagcatgg cgtcgacaac gacgcgactc tggaaaattt aggcaagcaa
      841 gccgtggttg cagctgctgc aggcgcagac ttcatcgccc cttccgccgc gatggacggc
      901 caggtacagg cgattcgtca ggcgctggac gctgcaggct ttaaagatac ggcgattatg
      961 tcgtattcga ccaagttcgc ctcttccttt tatggcccgt tccgtgaagc tgccggaagc
     1021 gcattaaaag gcgaccgcaa aagctatcag atgaacccta tgaaccgtcg cgaggcgatt
     1081 cgtgagtcac tgctggatga agcccagggc gcagactgcc tgatggttaa acctgctgga
     1141 gcgtacctcg acatcgtgcg tgagctgcgt gaacgtactg aattgccgat tggcgcgtat
     1201 caggtgagcg gtgagtacgc gatgattaag ttcgccgcgc tggcgggtgc tatagatgaa
     1261 gagaaagtcg tgctcgaaag cttaggttca attaagcgtg cgggtgcgga tctgattttc
     1321 agctactttg cgctggattt ggctgagaag aagattctgc gttaattttt ttcctctcag
     1381 aaagggggag ttaacctgtt gaaagtacgg tgaacgcccc ctcaccctaa ccctctcccc
     1441 aagggggcga gggaaccgtc cgcactcgta tcaccccgcc cgataaaacg gtttatcccc
     1501 aagaatcgtc acccgatgca taatccgccg ctgtggcagg taatcggcat tggcatagtg
     1561 ctgagtcacg cagttatccc aaatcgcaat atcattcggt tgccagcgcc aacgcacctg
     1621 aaactccggt ttagtgatat gggcgaataa aaagcctaac aaggcttcgc tctctttctc
     1681 gctgacatcg acaattcgcg tagtaaagcc ttcattcaca aacagcgcct gtttaccgct
     1741 caccggatgc gttcgcacca ccggatgtag caacggagga tttttcgcga ccgcctcgcg
     1801 ccagcgttga tgttcctcct cggttttgcg gtatttgtat tccgggaacg atttacggaa
     1861 atcatgctcc gcacgcagcc cgctcagcag ctggcggaag ggaacagaga gcgcctcata
     1921 ggccgtaata ccgctggtcc agagcgtatc accgccggtc gaaggtaatt ctttagctgc
     1981 cagaatcgcc cctgcgggtg gcgtttcaat aaatgtcaca tcggtatgcc agttgtcgtt
     2041 atctggcgga ttatcgttat gggtatccag cacgatgatc tcgtcaaccc cttcggcatg
     2101 agggtaaaca gggtgaatat gcagttcgcc aaaacgctgg gccagcgcgc gttgctgctg
     2161 cggcgtaatg gcttgatcgc gcagaaacac cacctgatgg cgcagcaccg catggtaaag
     2221 ctgttcaaac tgattatcgc ttaacgggcg cgtcaggtcg gcacccgaaa tttgtgcgcc
     2281 gatatacggc cccagcgggg taatgctcag acgttcactc attgtacttc tccatgctag
     2341 ggcgtcagac ggcgctgtaa cgcgcgcaaa cccagttcta aaagaaaggc gataatcgca
     2401 atcaccgcga ttcccgccag caccacgtca gtcgcgagaa attcacccgc tgactgaacc
     2461 ataaatccta aaccgcgcgt cgcggcaatc agctccgccg ctaccagcgt agaccagccc
     2521 acacccagac caatgcgtaa tccggtgagg atttccggca gcgcgccggg caaaatgaca
     2581 aaccacagca cctgcgcacg gctggcaccc agcgactggg cggcacgaat gcgaacctgc
     2641 tgcgcgcttt tcacccccgc cagcgccgac atcgccaccg gtgcaaaaat cgctaaatag
     2701 atcagtaaga tcttcgaggt ttcaccaata ccaaaccaga tcaccatcag cggcaaataa
     2761 gccagcggcg acaccggacg ataaagttcg attaccggat ccagaatgcc gcgcaccgtc
     2821 gggcttagcc ccatggcgat cccgaccgga ataccgatca ccaccgccgc gagtagcgcc
     2881 agcacaatgc gcgtcaggct ggctgccaga tgctgccaca gcgtggcgtc cataaatccc
     2941 tgcggtccgg caatggtgag cagttttgcc agtacttgtt gcggcggcgg caaaaacagc
     3001 gggctaatca gttgcagcgc cgccaccgtc caccatacag tgagtaaaac cgctaacgtg
     3061 ccaatgctta aggtcacctg acgcgagagc ggccagcgcc atttcagccg ccgcgaatgc
     3121 agtttttcat taatgagcac actcatgaga acgcctcccg ttgctcaaat acgcggctta
     3181 aaacatattc gcgcatggcg atgaattgtg gatcggactt gatgctgcgg ctcgactctc
     3241 ccgcaacaaa gcggcgagca aagttgagcg gcagccgctc cagcacacgg ccagggccgg
     3301 atgaaagcag aaccagttca gtcgccataa acaccgcttc ttctatatcg tgggtaatca
     3361 acagcacctg cttgcccgtc tcctgccaga gtttcagcag cagagtttgc atctggtcgc
     3421 gggtgaaggc gtccagcgca ccaaacggtt cgtcgagtaa taacagctgg ggattcgccg
     3481 ccagcgcgcg ggcaatcccc acccgctgac gttgaccacc ggaaagctgc cagatatagc
     3541 gtttttctgc gccttccagc cccacttttt tcagcacctg gtgcgcgatt tccagtcgct
     3601 gcattttctc tatacctgcc aattgcaggc cgaacgccac gttgtcctgt acattgcgcc
     3661 acggtagcag cccttcattc tgaaaaacca ccccgcgctc tgctcccggt ccctcaatac
     3721 gcttacccgc cagttgaatg ctgccatgct gataaggcac aaaaccggca atcagattca
     3781 gcaacgtggt tttaccgcag ccggacggcc ccagcaccac cagtagctcg ccgctttcca
     3841 gcgtcaggtt gatatcttcc agtgccggtt tgccgccata atcggcatag agatgagaga
     3901 tttgcagcat ctgcgcctcc ttttattgca cgaagcgcga ggtaacgtac tggctgtaat
     3961 cattcgctac agccgggacc ttgccctgct ctttcaaaaa ctgcgcggtg tcgatgatta
     4021 ctttgttcac cggtccggtc agttctgccg tttgttgctg cggcgtcaga taggtattcc
     4081 ccttaaccag ccccggaacg tcaccttccg gcacgccgct taaacgcgcc agtttgctga
     4141 tgttttccgg ctgtttcagc cacgcgtctg ggttagcaat gtacggttgc tgagcatcga
     4201 tggcgctttt agcgaacgct ttcacgacct caggatgttt ctcggcaaaa tctttgcgca
     4261 ccacccagac gtccagcgtt ggcgcacccc actgcccgac ctgttcagaa tcggtcaaca
     4321 ccttgccgtc tttttccagg gcgttaaccg ccggtgccca gacataagca ccatcaatat
     4381 caccccgctg ccatgcggcg ataatcgcgg gcggctgcag gttcacaatc tccacttgcc
     4441 ctagtttaat cccccagtgt ttcagcgccg ccagcaggct gtagtgggtg gtggagataa
     4501 acggtacggc aatgcgtttg ccaatcaaat cttcgggttt gctgatagtt ttctttacca
     4561 ccagcgcttc ggagttaccc agttttgacg ccagcaagaa gacttcaatc ggcacctgtt
     4621 ggctggctgc aaccgctaat gggctggaac cgaggttgcc gatttgcacg tcgccagaag
     4681 ccagcgcccg cacgatgctg gctccgctgt caaacttacg ccagtccacg ctcgccccgc
     4741 tctctttagc aaaggtgttg ccggcctgag ccacttt
//
LOCUS       DAJVUK010000219         4663 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.221, whole genome shotgun sequence.
ACCESSION   DAJVUK010000219 DAJVUK010000000
VERSION     DAJVUK010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4663
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.221"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            60..1859
                     /gene="cysJ"
                     /locus_tag="OQQ57_003975"
     CDS             60..1859
                     /gene="cysJ"
                     /locus_tag="OQQ57_003975"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HCS1958534.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
                     GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDIEAADEFLSELRVERRYQRDVY"
     gene            1859..3571
                     /gene="cysI"
                     /locus_tag="OQQ57_003976"
     CDS             1859..3571
                     /gene="cysI"
                     /locus_tag="OQQ57_003976"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HCS1958535.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPHHAMLLRCRLPGGVITTKQWQAIDKF
                     AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            3646..4380
                     /gene="cysH"
                     /locus_tag="OQQ57_003977"
     CDS             3646..4380
                     /gene="cysH"
                     /locus_tag="OQQ57_003977"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HCS1958536.1"
                     /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMSEEETRFFGLKRECGLHEG"
BASE COUNT         1150 a         1216 c         1332 g          965 t
ORIGIN      
        1 tgttttatgg gcgctgacag ggcgcagaaa cagctttgct tactggaaca taacgacgca
       61 tgacgacaca ggtcccacct tccgcgttgc ttccgttgaa cccggagcaa ctggcacgcc
      121 ttcaggcggc cacgaccgat ttaacgccta cccagcttgc ctgggtttct ggctatttct
      181 ggggcgtact caatcagcag cctgctgcgc ttgcagcgac gccagcgcca gccgcagaaa
      241 tgccgggtat aactattatc tccgcctcgc aaaccggcaa tgcgcgccgg gttgctgaag
      301 cattacgcga tgatttatta gcagcaaaac tgaacgttaa gctggtgaac gcgggcgact
      361 ataaattcaa acaaatcgcc agcgaaaaac tgctcatcgt agtgacgtca acgcaagggg
      421 aaggggaacc gccggaagaa gccgtcgcgc tgcataagtt cctgttctcc aaaaaagcgc
      481 caaagctgga aaacaccgcg tttgccgtgt ttagcctcgg cgatagctct tatgaatttt
      541 tctgccagtc cgggaaagat ttcgacagca agctggcgga actgggtggt gaacgcctgc
      601 tcgaccgtgt cgatgccgat gttgaatacc aggctgctgc cagcgagtgg cgcgcccgcg
      661 tggttgatgc gcttaaatcg cgtgcgcctg tcgcggcacc ttcgcaatcc gtcgctactg
      721 gcgcggtaaa tgaaatccac accagcccgt acagcaaaga cgcgccgctg gtggctagcc
      781 tctctgttaa ccagaaaatt accgggcgta actctgaaaa agacgttcgc catatcgaaa
      841 ttgacttagg tgactcgggc ctgcgttacc agccgggtga cgcgctgggc gtctggtatc
      901 agaacgatcc ggcactggtg aaagaacttg tcgaactgct gtggctgaaa ggcgatgaac
      961 ctgtcaccgt cgagggcaaa acgttgcctc tgaacgaagc gctacagtgg cacttcgaac
     1021 tgaccgtcaa caccgccaac attgttgaga attacgccac gcttacccgc agcgaaacac
     1081 tgctgccgct ggtgggcgat aaagcgaagt tacagcatta cgccgcgacg acgccgattg
     1141 tcgacatggt gcgtttctct ccggcgcaac tggatgccga agcgctgatt aatctgctgc
     1201 gcccgctgac cccgcgcctg tattccatcg cctcctcgca ggcggaagtc gagaacgaag
     1261 tacacgtcac cgttggtgtg gtgcgttacg acgtggaagg ccgagcccgt gccggtggtg
     1321 cctccagctt cctcgcggat cgcgtggaag aagagggcga agtccgcgta tttatcgaac
     1381 ataacgataa ctttcgcctg cccgctaacc cggaaacccc ggtgattatg attggcccag
     1441 gcaccggtat tgcgccgttc cgcgccttta tgcagcaacg cgccgccgac gaagcgccag
     1501 gtaaaaactg gctgttcttt ggtaatccgc actttacgga agacttcctg taccaggtgg
     1561 agtggcagcg ctacgtcaaa gatggcgtgc tgacacgtat cgatcttgcc tggtcgcgcg
     1621 accaaaaaga aaaagtttac gtacaagaca aactgcgcga acagggcgcg gagctgtggc
     1681 gctggatcaa tgatggtgcc cacatttatg tctgcggcga cgctaatcgc atggcgaaag
     1741 acgttgagca ggcacttctg gaagtgattg ccgaatttgg tggcatggac atcgaagcgg
     1801 cggatgaatt tttaagtgag ctgcgcgtag agcgccgtta tcagcgagat gtctactaat
     1861 gagcgaaaaa catccagggc ctttagtggt cgaaggaaaa ctgacagacg ccgagcgcat
     1921 gaagcttgaa agcaactacc tgcgcggcac cattgcggaa gatttaaacg acggtctgac
     1981 cggcggcttt aagggcgaca acttcctgct gatccgcttc cacggcatgt atcagcagga
     2041 tgaccgcgac atccgcgccg aacgtgctga acagaagctg gagccgcacc acgcgatgct
     2101 gcttcgctgt cgtctgccgg gtggggtgat taccactaaa cagtggcagg cgatcgacaa
     2161 atttgccggt gaaaacacca tctatggcag cattcgcctg accaaccgcc agacattcca
     2221 gttccacggc attctgaaaa agaacgtcaa accggtgcac cagatgctgc actcggtcgg
     2281 tcttgatgcg ctggcgacag ctaacgacat gaaccgtaac gtactctgca cctcgaaccc
     2341 ttacgagtcg cagctgcacg cggaagcgta cgagtgggcg aagaagattt ctgagcatct
     2401 gttgcctcgt acccgcgcgt atgcggagat ctggctcgac caggaaaaag tcgccactac
     2461 tgatgaagaa ccgatccttg gtcagaccta cctgccgcgt aagttcaaaa ccacggtagt
     2521 gatcccgccg cagaacgata tcgatctgca tgccaacgac atgaacttcg tggcaatcgc
     2581 cgaaaacggc aagctggtag gcttcaacct gctggtgggc ggtgggcttt ctatcgaaca
     2641 cggcaacaag aaaacctacg cccgcacggc gagcgagttt ggctatctgc cgctggagca
     2701 tacgctggcg gtggccgaag ctgtcgtgac aactcagcgt gactggggta accgaaccga
     2761 tcgtaaaaat gccaaaacca aatacacgct ggagcgcgtg ggggttgaga cgtttaaagc
     2821 ggaagtggag cgtcgcgcgg ggatcaaatt tgaaccgatc cgtccatatg agttcaccgg
     2881 acgaggcgat cgtattggct gggttaaggg cattgatgat aactggcacc tgacgctgtt
     2941 tatcgaaaat ggtcgcatcc ttgattatcc ggggcgtccg ctgaaaaccg gcctgctgga
     3001 gatcgcgaag atccacaaag gcgatttccg cattacggcg aaccagaatc tgatcatcgc
     3061 cggtgtaccg gaaagcgaga aagcgaagat cgagaagatc gccaaagaga gcgggttaat
     3121 gaatgccgtc acgccgcagc gtgaaaactc gatggcctgc gtgtcattcc cgacttgccc
     3181 gctggcgatg gcggaagcag agcgtttcct gccgtctttt atcgacaaca tcgataattt
     3241 aatggcgaaa catggtgtca gcgatgagca tatcgtgatg cgtgtaacag gctgcccgaa
     3301 cggttgtggt cgcgcgatgc tggcggaagt gggcctggtg ggtaaagcgc cgggtcgcta
     3361 caacctgcat cttggcggca accgcattgg gacacgtatc ccacggatgt ataaagaaaa
     3421 catcaccgag ccggaaatcc tggcgtcgct tgatgaactg atagggcgct gggcgaaaga
     3481 gcgcgaagcg ggtgaaggct tcggcgactt tacggtgcgt gcgggcatca ttcgcccggt
     3541 gctcgatccg gcgcgcgatt tgtgggatta accatcagcc cggtcttgta ggcctgataa
     3601 gaacgcgtga gcgtcgcatc aggcaaggca aacagtgagg aatctatgtc caaactcgat
     3661 ctaaacgccc tgaacgaact gccgaaggta gatcgcattc tggcgctggc ggaaactaac
     3721 gccgaactgg aaaaactgga cgctgaaggc cgcgtagcct gggcgctgga taatctgccc
     3781 ggtgaatatg tactttcttc cagctttggc attcaggcgg cggtgagcct gcatctggtg
     3841 aatcaaattc gcccggatat tccggtgatc ctcaccgata cgggttactt gttcccggaa
     3901 acctaccgct ttattgacga gttaacggac aaactcaagc tcaacctgaa agtgtaccgt
     3961 gctaccgaaa gcgcagcctg gcaggaagca cgctacggaa aactgtggga gcagggcgtt
     4021 gaaggcattg aaaagtacaa tgacatcaac aaagtcgaac cgatgaaccg ggctctgaaa
     4081 gaacttaacg cgcaaacctg gtttgctggc ctgcgccgtg aacaatccgg cagtcgcgcc
     4141 aatttaccgg tgctggcaat tcagcgtggc gtatttaaag tgctgccgat tatcgactgg
     4201 gataaccgaa ctatttatca gtacctgcaa aaacatggcc tgaaatatca cccattatgg
     4261 gatgaaggat atttatcggt cggtgatacc catacaaccc gtaaatggga acctggcatg
     4321 tcggaagaag aaacacgttt ctttggctta aaaagggaat gtggattgca cgaagggtaa
     4381 atattgccgg ataaattaaa cgcctctgtc agaaatgatg ggggcgtttt tattttgcga
     4441 gcagtattcc tgattttaaa cgtgaacgcc gctggaagaa ttatcaggta tagaatggcg
     4501 tcgggtgctt gaggctgtct ggcgttaagc attcgcgagg ttccagatgg acaaaagccc
     4561 caggcgatat ttctatcaac ctgaggccag cgttcgaacc caaacaattc gaatgttagt
     4621 ctcttctttg cagggaggca agacatgctg acaaaatgtg ctc
//
LOCUS       DAJVUK010000220         4662 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.222, whole genome shotgun sequence.
ACCESSION   DAJVUK010000220 DAJVUK010000000
VERSION     DAJVUK010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.222"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..755)
                     /locus_tag="OQQ57_003978"
     CDS             complement(<1..755)
                     /locus_tag="OQQ57_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CSS-motif domain-containing protein"
                     /protein_id="HCS1958537.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLQQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLL"
     gene            complement(886..2250)
                     /gene="sdaA"
                     /locus_tag="OQQ57_003979"
     CDS             complement(886..2250)
                     /gene="sdaA"
                     /locus_tag="OQQ57_003979"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HCS1958538.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGR
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            complement(2434..3012)
                     /locus_tag="OQQ57_003980"
     CDS             complement(2434..3012)
                     /locus_tag="OQQ57_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HCS1958539.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="OQQ57_003981"
     CDS             complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="OQQ57_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HCS1958540.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVTKILRQ
                     LEK"
     gene            4451..4630
                     /locus_tag="OQQ57_003982"
     CDS             4451..4630
                     /locus_tag="OQQ57_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HCS1958541.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
BASE COUNT         1170 a         1198 c         1212 g         1082 t
ORIGIN      
        1 cttagcagca ccgccagcgg taattgtgtt ggaagatagt gccatgccag cgccgtagcc
       61 cccggaccat taacgttaat ggtaaaagga aagcgttgcg aagaaacctg atagttttca
      121 ttgtcttcag gttgcggaag ggaatctacc agcccattac catagagcaa atgccgtttg
      181 tccaccgtca ggctggcgct actgatttgc tgcagttgtg gttcaaggag cattgccgtc
      241 agtaagtcga tgttaatcat ctccatgacc ccagcattgc tactgcccgc tgcaggcgtc
      301 cattgaatca aaaccggact gcctttaatc agggcacggt cgatcgtcag gcgtaaaagt
      361 ggttgcggtg caggaagttc agccagaatg tccacgacgg gcacattgcg ataaccaaaa
      421 atgctggagc aatagagtgt gccgtcttgc accaggccaa tggatcgcac agtttggagt
      481 tttgccgcct gtttacgtaa tggcaaatgg gcgacagagc agggcagacc aatcagcgga
      541 agcaagactt cgctacctgc ctgtagggga agcagtactt tatctaattc ctctacagcg
      601 tgattggcga attgtactac ccgttgttga tttaagttac gctgtgaaat aaatcgcacg
      661 ctcagggtcg aagcgagcgt aacgagtgcg caaatcgtac aaacaatcat tcgattacgt
      721 cgataggttt taatgatccg ttgtgctttt tgcatgcggg ccaccctgta agcgtatggc
      781 gacaaacgcc tgacgcaaca gtggatgtgt agtggggaat attacagcag acgagaaagc
      841 gggtataaat tcgcccatcc gttgcagatg ggcgagtaag aagtattagt cacactggac
      901 tttgattgcc agaccaccgc gtgaggtttc gcggtatttg gcgttcatgt ccttaccggt
      961 ttcgtacatc gtttcgatga ccttatccag cgagacgcgc ggtgcactgg tgcggcgcag
     1021 agccatccgt gcggcgttaa tcgccttcac agaggcaatg gcattacgct caatgcacgg
     1081 cacctgaacc tgccctgcaa ccgggtcgca ggttaaacca aggttgtgtt ccatgccaat
     1141 ttccgccgcc acgcaaacct gttccgggct accgcccagc agttctgcaa gacccgcagc
     1201 agccattgaa caggcaacac ccacttcgcc ctggcaacca acttccgcac cggaaataga
     1261 ggcgttcatt ttatacaatg caccaatcgc gcccgctgcc ataaagtaac gggtatagat
     1321 gtccgggctg accgattcaa taaagtggtc atagtaagcc agcactgccg gaacgatacc
     1381 gcaggcaccg ttggttggcg cagttaccac acgaccaccg gcggcgtttt cttcgttaac
     1441 tgccagcgca aacatgttta cccagtcaat gacattcatc ggatcgttag acagtttatc
     1501 gctggaaacc agcatccggc gcagggcaga cgcacgacgt ggcacgcgca gcgggcctgg
     1561 cagtacacct tcggtgttca tcccgcgatc gatacatgcc tgcatggttt gccagacatg
     1621 cgcgaaatac tcgtcgatct ctttcttgct gtgcagcgcc agttcgttct gcatagcgag
     1681 accagacagc gaatagccgg tttcattaca gtacgcgagc agttcggtgg cagatttgaa
     1741 cggatacggc acgctcactt cgttggcagc atcctgacca aagtgttctt catcgacgat
     1801 aaaaccgccg ccgatggaat aataagtttt gctgtagacg acttcatcgc cgttataggc
     1861 gtggatttgc ataccgtttt catgcagcgg caggttgccg ttatgaaaac gcatcccgtt
     1921 gtcgcgcggg aaatccactt catgccgtcc ctgtgccagc agcagacgtt cgcgctcttc
     1981 tacgtcgcga ataaaaccgg gaatactgtc gatatccacg gtggcaggtt cgttacctgc
     2041 aagacccata ataatggcga tatcggtgtg gtggccttta cccgtcagcg acagtgaacc
     2101 ataaacgtcc acggcaacgc gagtaacgct atccagtaag cctttttcga ccagatcatc
     2161 gacgaactgt ttacccgcct tcataggccc tacggtatgg gaagatgagg gaccaatccc
     2221 caccttaaac atgtcgaata gactaatcac gataatactc ctgacaaggt gactggactt
     2281 ccagtaacga actaataaca gcgcatagtg taagagggaa cgcggcgact ggcttaacta
     2341 ttcacatgaa ttaaactaat caaaaaccgc gatttaacta atattgcgat gattgtctca
     2401 agtagtgttt tgtagatgta aagataagta tagtcagggt ttcacaccaa tttgcagcgc
     2461 cagctcacga attatgcctg cggtcattcc ccatacaaaa tactgttcgt accaggacag
     2521 ccatacccga tgtgaatcgc cacggcggta gatatctaaa gggtgataac gacccagatg
     2581 taatgcctgg gcgagcggca tttcaaacac cgccgagact tcatcttcac tggcgcgata
     2641 cggcagatcg ggcgggataa tgccgatcac tggggttacc tgatagccag ttacgctatc
     2701 gacgggcggc agcacgccga taacttcaac ggcggaaggc ggtatagcga cctcttcttc
     2761 agcttcgcgc agcgcggcgg cgataactga tgcgtccgtg tcatcgactg cacctccagg
     2821 gaatgccact tgtccagcgt gtttacgcag atgaattgaa cgctgagtca gcaacaaccc
     2881 cggttgcggt cgacggacga tggggattaa cacggcagcc tgacgatgat ttagggtttc
     2941 ccggttaatt tgcgggcgca aaagttgaaa gcgagataaa aaatcatcaa gcgtcaggct
     3001 acggtattcc acgtcttact tctccagttg gcgtaatatc ttagtaactt tatcaaaagt
     3061 ttcctgatat tccgcttctt cctggctatc ggcgacaatt ccaccgcccg cagagcagta
     3121 tatttgtccg ttaatggcag tcagcgtgcg gatagtaatg ctggtatcca tgttgccgca
     3181 aaagctcaaa tagccaatgc tgccgcacca ggcattacgt cgctgcggtt ccagttcgtc
     3241 gataatttcc atagcccgta ctttcggagc cccggttatt gagccaccag gaaaagctgc
     3301 gcgcagcaga tcgctggcgt gtaactgttc tggtagtcgc gccgttatag tgctgaccag
     3361 atgatgcacg gcagggaagg gttccaccac gaagagctct ggtactttta ccgaaccggc
     3421 tacggcaaca cgaccgatat cattacgcat taaatcgaca atcatcagat tttcggcacg
     3481 atctttcgct gagttcgcca gtttttctgc ttgtttgcta tcttcctgag gatcgggcag
     3541 gcgtggtagc gtgcctttaa tcgggcgggt ctggatttca ctattatcac aaagaataaa
     3601 ccgctctggc gaaaggctta aaattgcacc ctgttcaaga cgtaaaaaag cgctaaatgg
     3661 cgcgcggttg gcctgattaa gctgaaggaa tgcctgccat tcatcgccag aataggtcgc
     3721 atgaaaacgc tgggcgagat tcacctgata gcaatcaccg ctgtgcagat attcctgtac
     3781 ctggcgaaat ttttcgccgt actgctcgcg ggtcatattg gattgccagt cggaagtgag
     3841 cgtgaaatct tcctgcggcg agaattgctg gctttccagc caggcccgac gggcattgac
     3901 atcattatga ctcagcaaag aaactgtatg acgctggtgg tcgacaatga gcgcccaatc
     3961 gtagataccc actgccatat ccggcagaac gatatcttgt tccgcaattt ctggcagtga
     4021 ctcaaaacgg cggcccagat cgtagccaaa caaccccagt gcgccgccct gaaatggcaa
     4081 atcttcgtta tgcgttgggc gaatgtctgc gcgatccagc acctgctgga gcacctgtag
     4141 cgggtcatca gtggtcgttg tgcgtttttc gctttcacta acaacggttt ctttaccgaa
     4201 agtggttaaa gtgcaaatcg gctcggcgac cacaatatca aagcggctat acggatgatc
     4261 ggcatagccg gagtgtaaaa gcatcgccca cggcaggtgg cttaagcggg agaaataaaa
     4321 ttcagcggcg tcctgacgcc agggtaaagt aatcacagcg ggagataacg tcttcatcag
     4381 tcctgactct actggctatg tgccgggtag catgaaataa ttagcgccaa caatttagca
     4441 ggagttaaca atgtttgcag gtttaccttc actcacccat gaacagcagc aaaaagctgt
     4501 cgagcggatc caggaactga tggcacaagg gatgagcagc ggccaggcaa tcgcgctggt
     4561 ggcagaagag ctgcgtgcca accactccgg cgagcgaatc gtggcgcgtt ttgaggatga
     4621 agacgagtaa cacactaatc cgtatcgatt tcgttataga ag
//
LOCUS       DAJVUK010000221         4460 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.223, whole genome shotgun sequence.
ACCESSION   DAJVUK010000221 DAJVUK010000000
VERSION     DAJVUK010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4460
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.223"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            127..489
                     /gene="queD"
                     /locus_tag="OQQ57_003983"
     CDS             127..489
                     /gene="queD"
                     /locus_tag="OQQ57_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708563.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HCS1958542.1"
                     /translation="MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
                     DPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLL
                     SAVMVKETCTAGCIYRGE"
     gene            567..1835
                     /locus_tag="OQQ57_003984"
     CDS             567..1835
                     /locus_tag="OQQ57_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCS1958543.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWQLVGDALRSCVNTGISVRGMGMALTGAQAAQTLISACQHREP
                     QNLFALYHHNVERSLLWDVLQRYQHVPALLQRPSWYRAWPALMQDISRDLWDQGDKPV
                     PPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            1826..2086
                     /locus_tag="OQQ57_003985"
     CDS             1826..2086
                     /locus_tag="OQQ57_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HCS1958544.1"
                     /translation="MSVAHNLWRVADAPHIVPADSVERQMVQWLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
     gene            2103..2678
                     /locus_tag="OQQ57_003986"
     CDS             2103..2678
                     /locus_tag="OQQ57_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HCS1958545.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDACNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(2826..3686)
                     /locus_tag="OQQ57_003987"
     CDS             complement(2826..3686)
                     /locus_tag="OQQ57_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HCS1958546.1"
                     /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
                     LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
                     GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNV
                     TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
                     HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
                     LVTNIHADCQ"
     gene            complement(3683..>4460)
                     /locus_tag="OQQ57_003988"
     CDS             complement(3683..>4460)
                     /locus_tag="OQQ57_003988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HCS1958547.1"
                     /translation="NILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQ
                     AAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEF
                     VARHIAEWQHQNPLDLIITGSQSSEGQNGQTPFLLAEMLGWTCFTQVERFTLDALFIT
                     LEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAM
                     QCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
BASE COUNT         1002 a         1215 c         1139 g         1104 t
ORIGIN      
        1 caaatgaatt tagccaatca ttaagataaa tcagcgattt tgcgcaacaa agtcgtttta
       61 gataatgcga aaaaacagcc tttccggtac tctacggcgg ttttatcgtc ctgtagagaa
      121 attatgatgt ccaccacgtt atttaaagat ttcaccttcg aagccgctca ccgcttacca
      181 cacgtcccgg aagggcataa atgtggtcgc ctgcacgggc attcctttat ggtgcgactg
      241 gaaattaccg gggaagtcga tccgcatacg ggctggatta tcgatttcgc tgaactaaaa
      301 gcggcgttta agccaactta tgagcgcctc gatcaccatt atctcaatga tattccaggt
      361 ctggaaaacc caactagcga agttttagca aaatggattt gggatcaggt taaacccgtt
      421 gtgccgctgt taagtgcggt gatggtaaaa gaaacctgca ccgctggttg tatctatcgc
      481 ggcgaatgat aagagtgtgt cggcggtcaa tttcccttaa gtaacgctat gttagggtat
      541 tgtgttcagg atatctgggg catgacatgg aagacgactg cgacattatt attattggtg
      601 ccggtattgc aggcaccgct tgcgcgttac gctgcgcgcg agcgggttta tccgttttgt
      661 tactggaacg cgctgaaatc cccggcagca aaaatctttc cggcggacgg ttatataccc
      721 atgcactcgc ggaactcctc cctcagtttc atctgaccgc gcctcttgaa cgacgcatca
      781 ctcacgaaag cctttccctg ttaacgcccg atggcgtaac gacgttttcc agcttacagc
      841 ccggcggtga atcctggagt gtattacgtg cacggttcga tccgtggctg gttgccgaag
      901 ccgaaaaaga aggtgtcgaa tgtatccccg gagcgacggt ggatgcactg tatgaagaaa
      961 acggcagagt ctgtggcgtt atttgtggtg acgatattct ccgcgcccgt tatgtggtgc
     1021 tggcagaagg tgccaacagc gtcctggctg aacgtcacgg gttagtgact cgtcctgctg
     1081 gcgaagcgat ggcgttgggg atcaaagaag tgctgtcgct ggaaacatcc gctattgaag
     1141 aacgttttca tctggagaat aacgaaggcg cagcgttgct gttcagcggc ggaatctgtg
     1201 atgacttacc cggcggcgca tttctttata ctaatcaaca aacgctctcg ttagggattg
     1261 tttgcccgct ctcttccctt acgcaaagtc gtgttccggc aagcgagctg ctgactcgct
     1321 ttaaagcgca tccggcagtg cgcccgctta tcaaaaacac ggaatcactg gagtatggtg
     1381 cgcatctggt gccagaaggt ggcttgcaca gtatgccggt gcaatacgcc ggtaacggct
     1441 ggcagctggt gggcgatgcg ttgcgcagtt gcgtcaatac cggaatttcc gtgcgcggca
     1501 tgggtatggc gctgactggc gcacaggcgg cacaaacgct gataagcgcc tgccagcacc
     1561 gcgagccgca aaatctgttt gcgctttatc atcacaacgt agagcgcagc ctgctatggg
     1621 atgttctaca acgttatcag catgttccgg cgcttttgca acgccctagc tggtatcggg
     1681 cgtggcctgc gttaatgcag gatatttccc gcgatttatg ggatcagggt gataaacctg
     1741 ttccaccgct gcgccagtta ttctggcgtc atttacgtcg tcatggcctg tggcatctgg
     1801 cgggcgatgt tatcaggagt ctgcgatgtc tgtagcccat aatctctggc gcgttgctga
     1861 tgcgccgcac attgttccgg ctgactccgt tgagcgtcag atggtacaat ggttgattaa
     1921 cgcctgtccg gcaggtcttt tttcgctcac accggaaggt gacttacgcg ttgattatca
     1981 cggctgcctg gagtgtggca cctgccgttt gctgtgcgac gaatccacac tacaacagtg
     2041 gcgctatccg ccttccggat tcggcatcac ctaccgcttt ggataaataa taaggataat
     2101 ttatgcccct cttacacctg ctccgccaga atccggtgat tgctgccgtt aaagataatg
     2161 ccagcctgca actggcaatc gactctgaat gccagtttat ttccgtgttg tacggcaata
     2221 tctgcaccat cagtaatatc gttaaaaaga ttaagaacgc cgggaaatat gcttttattc
     2281 atgttgattt gctggaaggc gcgtcaaata aagaagtcgt gattcagttt ttgaaactgg
     2341 tgaccgaggc ggacggcatt atcagtacca aagcctcaat gttgaaagcg gcaagagcgg
     2401 aaggtttttt ctgtattcat cgcctgttta ttgttgattc aatttcgttt cacaacattg
     2461 ataagcaagt tgcgcaatcg aatccggatt gtattgagat cctgccaggc tgtatgccca
     2521 aagtgctggg ctgggtgaca gagaaaatcc gccaaccgct gattgccggt gggctggtgt
     2581 gcgatgaaga agatgcgtgt aatgcgatta acgcgggtgt cgtggcgctt tccaccacga
     2641 ataccggggt ctggacgtta gcgaaaaaat tactttgacg ggataatcgt aaccaattga
     2701 atttggtttg atttgtaggc cgcacgccac atccgacatt cagcgcctga tgcgacgctt
     2761 gacgcgtctt atcaggccta caagtcccca ggccagaacc gtaggcagga tcatccggca
     2821 acacattatt ggcaatctgc gtgaatgttt gtcaccagtg cctccagcac cactttccag
     2881 tcatcaacca cgccaacatc tgcctgtgaa aataccgcag cgctggcgtc atgattaatc
     2941 gccaccacaa acttgctatt gcgtacgccc gccattaacg ctgctgcgcc ggaagcgcca
     3001 acaacaatac acacctcagg tgccagcaaa tgtccggaaa taccaatcac tttttcagca
     3061 tcaacgccac cgttcatcac tcgcgcccga ctgtagccca cttcggctcc cagcttttct
     3121 gccagcatag cgatttcctg gttatctgcc tctccgccct gccccaccac cagcacccgt
     3181 ctggcctcag ctaatgggtc gcgagtaaca tttttcagat cctctgtgct aaccagccag
     3241 tcgggaagcg cacccgggac aatgttcagt tgttgtattc cagagggcaa cgtggcgttt
     3301 ttcgctgctc ccgcctgacg cgccagagaa aggcatagcg ggcgtttttc tgtttgcagc
     3361 gtcgccgtta gcgcatttcc ccagtgggat ttgcgcacgc ttacggttgg aatatctaac
     3421 gaagtcacct ggcagatgct tgcaccatgt aaacgccagg ccagccgggt cgacagttca
     3481 tcgccaaacg ttcccggcgg aaagagaaca acgtccgcag gcgttcgctg ccactgttcc
     3541 accaacgcat ccagcacctg ttccgccact acaggctgag gttcaatctg ccagtgcgcc
     3601 agggtacaac cactgaaatc ctgcgccgcc agccagcttg ctattgcggc attctcctga
     3661 tttattgtca caattgcgat attcatggct gcatcctttg gcgtaaatag tcctgccata
     3721 gcttttgagc tttttctgct accgtttgcc catcaatcag cgtcgctccg cgtcgttgct
     3781 ctgctcttgc cagttgcaga cactgcatcg ctggcatttc ggcagcaaca gttttacgga
     3841 taatttctgc tttccccgca gccattcgct ggcgcattcc cggtactggc aaggccactt
     3901 caccgcactg acgcacggca atcaccgcag gcaagcgaac ccggcaacaa cgcaacccat
     3961 gttcagtacg ctgttcgagg gtgataaaca gcgcgtcgag agtgaaacgc tccacctggg
     4021 tgaagcaggt ccagcccagc atttccgcca gcaaaaatgg cgtttgccca ttctgccctt
     4081 cgctgctttg gctgccggta attatcagat ccagcggatt ctgatgctgc cattcggcaa
     4141 tatggcgagc gacaaattcc ggcgcaaagc gcagatctgc cgccgtctcc agcaatacag
     4201 cttcctcaaa cccaagagcc atgagatagc gcagccagtg caatgcccgt tcatccccca
     4261 tgctcaacgc ggttaaagac atcggcgtac cgttttttct ctgcgccaac agcagcgcgg
     4321 cagcggcctg ttcatcagca ccgagtaaac ttcgcagtag cgaaatatcc ggtccgcttt
     4381 taccctgagc cgccgcctgc cactcttttt ccgccagcat tccggcatcc ggttcggctt
     4441 taaacgctaa cagaatgttc
//
LOCUS       DAJVUK010000222         4459 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.224, whole genome shotgun sequence.
ACCESSION   DAJVUK010000222 DAJVUK010000000
VERSION     DAJVUK010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4459
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.224"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            142..2139
                     /gene="betT"
                     /locus_tag="OQQ57_003989"
     CDS             142..2139
                     /gene="betT"
                     /locus_tag="OQQ57_003989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline BCCT transporter BetT"
                     /protein_id="HCS1958548.1"
                     /translation="MSENDTIPKKSTSQINKAVFFTSALLIFLLVAFAAVFPDVADKN
                     FKLLQQQIFTNASWFYILAVALILLSVTFLGLSRYGDIKLGPDHAQPDFSYHSWFAML
                     FSAGMGIGLMFFGVAEPVMHYLSPPVGTPETVAAAKEAMRLTFFHWGLHAWAIYAIVA
                     LILAFFSYRHGLPLTLRSALYPIIGDRIYGPVGHAVDIFAVIGTVFGVATSLGYGVLQ
                     VNAGLNHLFGVPINETVQVILIVVITGLATISVVSGLDKGIRILSELNLGLALLLLAL
                     VLCLGPTVLLLKSFVENTGGYLSELVSKTFNLYAYEPKSSNWLGGWTLLYWGWWLSWS
                     PFVGMFIARVSRGRTIREFVTGVLFVPAGFTLMWMTVFGNSAIYLIMNQGATDLANTV
                     QQDVALALFNFLEHFPFSSVLSFIAMAMVIVFFVTSADSGAMVVDTLASGGVANTPVW
                     QRIFWASLMGIVAIALLLAGGLSALQTVTIASALPFSVILLISIYGLLKALRRDLTKR
                     ESLSMATIAPTAARNPIPWQRRLRNIAYLPKRSLVKRFMDDVIQPAMTLVQEELNKQG
                     TISHISDAVDDRIRLEVDLGNELNFIYEVRLRGYISPTFALAAMDNDEQQTEQHRYYR
                     AEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHFLHLVR"
     gene            2202..3479
                     /locus_tag="OQQ57_003990"
     CDS             2202..3479
                     /locus_tag="OQQ57_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HCS1958549.1"
                     /translation="MISRWKWMLKQTIKKLWFRATLFAIVAIITALLSILFKSMIPES
                     VSVKVGAEAVDNILNILASSMLAVTTFSLSIMVTAYGSATTNVTPRATRLVVEDVTTQ
                     NVLATFIGSFLFSLVGIIALNMGAYGERGRVILFIVTLVVIALILITLLRWIQHLTSL
                     GRVGETTAQVEQAAIETFIARARNPCLGGYPWLENNEQPKGTVAVYPKKIGYVEYIDM
                     VKLSKLLTNDPRHVYLVAQPGSFIHPSMPVLYLSQGQESSINTDLLETIIVSDARSFA
                     QDPRFCLSVMAEIACRALSPAVNDPGTAIDVIGRGVRILSTYAQNKSDEIEVKYPSVH
                     VAPLQNNDLLEDFFSPVARDGASMREIQIRVLKGLSMLSKGWPEIFAEAAHTLAFETL
                     EHATRADHIDSDRYLIKSTYYNLFSGEYSNKKK"
     gene            3725..3886
                     /locus_tag="OQQ57_003991"
     CDS             3725..3886
                     /locus_tag="OQQ57_003991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001548957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958550.1"
                     /translation="MTGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVD
                     AIVSTTDEK"
     gene            complement(3930..4459)
                     /gene="istB"
                     /locus_tag="OQQ57_003992"
                     /pseudo
     CDS             complement(3930..4459)
                     /gene="istB"
                     /locus_tag="OQQ57_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS21-like element IS100kyp family helper ATPase
                     IstB"
BASE COUNT         1072 a         1032 c         1123 g         1232 t
ORIGIN      
        1 tggtagtgtc cgctattgcc agtacacctc aacattccac catgcattcc gattaacgcc
       61 gcatagccag ttgaactttg ctactttgtg agaggtagta ccttctatcc agtgcgaatt
      121 taattaatgg aataaatgat tatgagtgaa aatgatacaa tcccaaagaa gtctacaagt
      181 cagattaaca aagcggtatt ctttacatct gctttgctaa ttttccttct tgtcgccttt
      241 gccgccgtat tcccggatgt cgccgacaaa aattttaaac tacttcagca acaaatcttc
      301 acgaatgcca gctggttcta catccttgct gtggccctga ttttactgag tgtcacgttc
      361 cttggactct cacgctacgg tgatatcaag ctgggcccgg accatgcgca gcctgatttc
      421 agctaccact cctggtttgc gatgcttttt tcggcaggga tggggatcgg cctgatgttc
      481 tttggcgttg ccgaacctgt aatgcattat ctttcgccac ccgttggcac tccagaaacc
      541 gttgcggcag ctaaggaagc aatgcgtctg acctttttcc actggggact gcacgcatgg
      601 gcaatttatg ccattgtggc gctgattctg gcgttcttca gttaccgtca cggtctgcct
      661 ttaactctgc gctccgcact ctatcccatt attggcgatc gcatatacgg acctgtagga
      721 catgcggttg atattttcgc tgttataggc acggtctttg gcgttgcgac atcactgggt
      781 tacggtgttt tgcaggtgaa tgccggtttg aaccatcttt tcggggtgcc catcaatgaa
      841 acggtgcagg taattctgat cgtggtcatc acggggttag cgacgatttc agtggtgtcc
      901 ggtctggata agggaatacg tatcctgtct gaactcaatc tgggtctggc tttgttgctc
      961 ctggcgctgg tcctgtgtct gggaccaacc gtgcttctgc tgaagtcatt tgtggaaaat
     1021 acgggcggtt atctttcgga actggtgagt aaaacgttca acctttacgc gtatgagccc
     1081 aagtcgagca actggctggg gggctggaca ttactgtact ggggatggtg gctttcatgg
     1141 tcgccgtttg tggggatgtt catcgcacgg gtctcccgcg ggcgaaccat tcgcgagttt
     1201 gtcaccggcg tgctgtttgt tcccgcgggt tttacgctaa tgtggatgac ggtgtttggt
     1261 aacagcgcga tctatctcat tatgaaccag ggggccacag acctcgccaa tactgttcag
     1321 caggatgtgg cgctggccct gtttaatttc ctggagcatt tcccgttctc ttctgtgctg
     1381 tcattcattg caatggcgat ggtcatcgtc ttctttgtaa cgtctgctga ttcgggggca
     1441 atggttgtgg atactctggc atcaggtgga gtggcaaaca cacccgtctg gcagcgaata
     1501 ttctgggcct cgctcatggg cattgttgca attgcgcttc tccttgccgg agggctaagt
     1561 gcgctgcaaa cggtgacaat agcgagtgca ttgcccttct cagtgatctt actaatatct
     1621 atatacggac ttttaaaagc tttgcgccgg gatttgacca agcgtgaaag cctgagcatg
     1681 gcgacaattg ctcctacggc tgcacgtaac ccaattcctt ggcagagaag gttacgcaat
     1741 atcgcgtatc tgccgaagcg atctcttgtg aaacgtttta tggacgacgt tatccagccc
     1801 gccatgacgc tggttcagga ggaactgaac aagcagggga cgataagcca cattagtgat
     1861 gcagtcgacg atcgtattcg tcttgaagtc gatttgggca acgagctgaa ttttatatat
     1921 gaagtgaggc ttcgcgggta tatctcaccg accttcgcgc tcgccgcaat ggataatgat
     1981 gagcagcaga ctgaacaaca tcgatattat cgcgctgagg tttatctcaa agaaggcggt
     2041 caaaattatg atgtgatggg ctggaaccag gaacagctga ttaatgacat actggaccag
     2101 tacgaaaaac acctgcactt cctgcacctg gttcgttaat agcaacatgc cgtcctgggg
     2161 gcggcaatta ttatcccggc cgcaatatga gggaatgcag aatgatttca cgctggaaat
     2221 ggatgctgaa gcagacaatt aaaaaactat ggttcagggc aacgttattc gcaattgtcg
     2281 cgataataac ggccctttta tcaattcttt ttaaatcaat gatacctgag tcggtttccg
     2341 tgaaggttgg tgcggaagca gtcgataaca ttctgaacat actggcatcg agtatgctgg
     2401 cagtgaccac attttcgctg agtatcatgg tcacagccta cggttcagcc actactaatg
     2461 tgactcccag agctacgcgt ttagttgttg aagacgtcac cacacaaaat gtactggcca
     2521 ccttcatcgg ttcttttctc ttcagtctgg tagggattat tgccctcaat atgggagctt
     2581 atggagaaag ggggagagtc attttattca ttgtcacact ggttgtcatt gccttaatcc
     2641 tcatcacatt gcttcgctgg atacagcatt tgacctctct ggggagggtt ggtgagacaa
     2701 cggcacaagt agaacaggcg gccatcgaaa catttattgc gagagcaaga aatccctgtc
     2761 tcggcggata tccatggctt gagaacaatg aacagccgaa aggaacggtt gcagtttatc
     2821 cgaagaagat tggctatgtt gaatatattg atatggtgaa acttagcaag ctgctgacca
     2881 atgatccccg tcatgtatac ctcgtggcgc agccaggcag tttcatacat ccgtccatgc
     2941 cagttttgta cctgagtcag ggccaggagt cgtcaatcaa caccgattta cttgagacga
     3001 ttattgtctc ggatgcacgt tcatttgctc aggatcctcg attttgtctt agcgtcatgg
     3061 ccgaaatagc ctgccgggcc ctttcccctg cagtgaacga tcctggaacc gccattgatg
     3121 tcattggcag aggtgttcgt atactttcca cttacgcgca gaataaatct gatgaaatag
     3181 aagtgaaata tccttcagta catgttgcac cacttcagaa taacgatcta ctggaagact
     3241 ttttctcacc tgtcgcgcgc gatggtgcca gtatgaggga gattcagata agagtcctta
     3301 aaggactgtc gatgctgagt aaaggttggc ctgagatatt tgctgaagcc gcacataccc
     3361 tggcatttga aacattagag catgcaactc gtgctgacca tatagattct gatagatatc
     3421 taataaaatc aacttattat aatttattta gtggcgaata ttctaataaa aaaaaatagc
     3481 tgcagagcaa gcaattcggt tgttggcaag tcaagggcaa agcattcgcg tgagaatggg
     3541 cgtatgcttt gtgccaaaag caaacgttgc taattctgca ctgttcagcg atggcgcagt
     3601 agcgacaggc actgccactg tccagtcggc aaaagcgaac actttgccac tgcggggata
     3661 aactgattga agctctcgcg caaaatcact tattcttttg acaataaaat gtaggagatg
     3721 ggtcatgaca ggcgaaaatc gtggccgggg aaggccgcga aagacagaaa gtacctatgc
     3781 agatactcgt aatgatctga tccgcagtgg ccttgaactg ctgacgcaga atggttttct
     3841 tgcgacggga gtcgatgcca ttgtgtcaac gacggatgaa aagtgatcca cttatatctc
     3901 caccaacggc ccaatattga tccaccgttt tactcaggat tagcttcagc tataaccccg
     3961 gcctttcgtt tctgtctgag tcgatagctt tctcctttga tttgaacgac atgtgagtgg
     4021 tgtaagatac ggtccagcat cgctgaggtc agtgctgcat caccggcgaa cgtttgatcc
     4081 cactgcccga acggcagatt ggatgtcagg atcattgcgc tcttttcgta acgtttagcg
     4141 atgacctaga agaacagttt tgcttcttcc tgactgaacg gcagatagcc tatttcatca
     4201 atgatgagca ggcggggggc cattactcca cgctgaagcg tcgttttata acggccctga
     4261 cgttgtgccg tagataactg aagtaacaga tctgctgctg ttgtgaagcg aaccttgata
     4321 cctgcacgga ctgcttcata gcccatcgct attgccagat gggttttccc cacacctgat
     4381 ggccccagta atacgatatt ttcattacgt tctatgaagc tgagtgagcg taacgactgg
     4441 agttgcttct gcggtgctc
//
LOCUS       DAJVUK010000223         4434 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.225, whole genome shotgun sequence.
ACCESSION   DAJVUK010000223 DAJVUK010000000
VERSION     DAJVUK010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4434
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.225"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1088
                     /gene="nadB"
                     /locus_tag="OQQ57_003993"
     CDS             <1..1088
                     /gene="nadB"
                     /locus_tag="OQQ57_003993"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HCS1958551.1"
                     /translation="VGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGD
                     GIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDF
                     DERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDL
                     TQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLV
                     YGWSAAEDITRRMPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVR
                     TTKRLERALRRINMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGL
                     HFTLDYPELLTHSSPSILSPGNHYINR"
     gene            complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="OQQ57_003994"
     CDS             complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="OQQ57_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HCS1958552.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            1942..3276
                     /gene="srmB"
                     /locus_tag="OQQ57_003995"
     CDS             1942..3276
                     /gene="srmB"
                     /locus_tag="OQQ57_003995"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HCS1958553.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIEELRPKTRTPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
     gene            complement(3485..4366)
                     /locus_tag="OQQ57_003996"
     CDS             complement(3485..4366)
                     /locus_tag="OQQ57_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311470.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1958554.1"
                     /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS
                     VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKGSDPDGELRVVSGETLLS
                     YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG
                     EQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIEL
                     LSIESIKRCVAANIGVSYLPRFAVEKELESGELIELPFGEQSQTITAMCAHHAGKAVS
                     PAMHTFIQCIEECFLPG"
BASE COUNT         1126 a         1208 c         1123 g          977 t
ORIGIN      
        1 ttgtaggcgc gtgggtatgg aaccgaaata aagaaacggt ggaaacctgc cacgcaaaag
       61 cagtggtact ggcaaccggc ggtgcgtcga aggtgtatca gtacaccacc aatccggata
      121 tttcttctgg cgatggcatt gctatggcgt ggcgcgcggg ctgtcgggtt gccaatctcg
      181 aatttaatca gttccaccct accgcactgt atcacccaca ggcacgcaat ttcctgttaa
      241 cggaagcact gcgcggcgaa ggcgcttatc tcaagcgccc ggatggcacg cgttttatgc
      301 ccgattttga tgagcgcggc gaactggccc cgcgcgatat tgtcgcccgc gccattgacc
      361 atgaaatgaa acgcctcggc gcagattgta tgttcctcga catcagccat aagcccgccg
      421 attttattcg ccagcatttc ccgatgattt atgaaaaatt gctcgggctg gggattgatc
      481 tcacacaaga accggtaccg attgtgcctg ctgcacacta tacctgcggt ggtgtaatgg
      541 ttgatgatca tgggcgtacg gacgtcgagg gcttgtatgc cattggcgag gtgagttata
      601 ccggcttaca cggcgctaac cgcatggcct cgaattcatt gctggagtgt ctggtctatg
      661 gctggtcggc ggcagaagat atcaccagac gtatgcctga tgcccacggc gtcagtacgt
      721 taccaccgtg ggatgaaagc cgcgttgaga accctgacga acgggtagta attcagcata
      781 actggcacga gctacggctg tttatgtggg attacgtcgg cattgtgcgc acaacaaaac
      841 gtcttgagcg cgccctgcgg cgtatcaata tgttgcaaca ggaaatagac gaatattacg
      901 cccacttccg cgtgtcgaat aatttgctgg agctgcgtaa tctggtgcag gttgcggaat
      961 tgattgttcg ctgtgccatg atgcgcaagg agagtcgtgg cctgcatttc acactggatt
     1021 atccggaact gctcacccat tccagtccgt cgatcctttc ccccggcaat cattacataa
     1081 acagataaaa agcctgggtc agcgccgtat acgcttcgga atagttctgg tctggcccac
     1141 gaatgactaa gcgatcgcta aagcattctc ccgcctgcgg ggagaatgcc agcagcaccc
     1201 gatgcggcag tcgcgcttcg ttttccgcca catccgtccg caaacgtaaa tgccagccca
     1261 tgcttaatgc cagctccgta aaaccattac caatctgctc tggcagcact acgcagaaaa
     1321 atccctcttc ggtaatgcac tccgccgcac aggtcagcag cgatgggtga tcaagcgtag
     1381 tggtatagcg agcctgttcc cgttgaggga tcgcgcactc tactccctgc tgatagtaag
     1441 gtgggttact gatgattaaa tcgaagcgta ctgtctgctg tgtgagccac tgctgaatat
     1501 ccgccgtatg gacgttaatc cgctctgccc acggggactg gttgatattt tcctgcgcct
     1561 gcgcggcagc ttcactttcc agctcaacgg catcaattat cacgctgtca ctggttcgct
     1621 gcgccagcat cagtgccagc aacccgctac ccgcgccgat atcaaggcaa cgtttcaccc
     1681 cagccaccgg tgcccatgcg cccagcaaaa tgccatccgt tcccactttc atcgcacagc
     1741 gatcgtgagc aacaaaaaac tgtttaaaag taaatccatt acgacgaagc acggatgtag
     1801 actgtgacat gaaaataaaa ccttgcagga aaaacggcga tagcaccggg tgagaacaat
     1861 acccgagaag cgatatccat acaaacagat gaagattgca gccgtaacgt ctataatcag
     1921 cgccccacac agaggtagaa catgactgta acgacttttt ccgaacttga actcgacgaa
     1981 agcctgctgg aagccctcca ggataaaggt ttcactcgcc cgaccgccat tcaggctgcc
     2041 gccattccgc ctgcgctcga tggccgtgat gtactcggtt ctgcgccgac aggcaccggt
     2101 aaaacggcgg cgtatctgct gccagcgttg cagcacctgc tcgatttccc gcgtaagaaa
     2161 tccggtccgc cgcgtatttt gatcctcacc ccaactcgcg agctggcgat gcaggtggcc
     2221 gatcatgccc gcgaactggc gaaacatacg catctggata tcgccaccat taccggcggc
     2281 gtagcctata tgaaccacgc ggaagtgttc agcgaaaatc aggacatcgt ggtcgccacg
     2341 accggacgtc tgctgcaata cataaaagaa gagaacttcg attgccgcgc ggttgaaacg
     2401 ctgatcctcg acgaagcaga ccgtatgctg gatatgggct tcgctcagga tatcgaacat
     2461 attgctggcg aaacgcgctg gcgtaaacag accctgctct tttcggcaac gctggaaggc
     2521 gatgcgattc aggactttgc cgagcgtctg ctggaagatc cggtggaggt ttctgccaat
     2581 ccgtccaccc gtgagcgcaa aaaaattcat cagtggtatt accgcgccga tgacctggaa
     2641 cataaaaccg cattgctggt gcatctgtta aaacagccgg aagcgacccg ctcaattgtg
     2701 tttgtgcgta agcgtgaacg tgtgcatgag ctggcaaact ggctgcgcga agcgggcatc
     2761 aacaactgct atctcgaagg tgagatggta cagggcaagc gtaatgaagc gattaaacgc
     2821 ctgaccgaag gccgcgtaaa cgtactggta gcaaccgatg ttgccgcgcg cggtatcgac
     2881 attccagacg tcagccacgt ctttaacttc gatatgccgc gcagtggtga tacttatttg
     2941 caccgtatcg gacgtaccgc gcgcgccggt cgtaaaggca ccgcgatttc gctggtggaa
     3001 gcccatgacc atctgctgct tggcaaagtt ggccgttata ttgaagagcc gataaaagct
     3061 cgcgtcattg aggaactacg cccgaaaacg cgtacgccaa gcgagaagca gaccggcaag
     3121 ccatcgaaga aagtactggc aaaacgcgcc gagaagaaaa aagctaaaga gaaagagaag
     3181 ccgcgggtga aaaaacgcca tcgcgacacc aaaaatattg gtaagcgccg taaaccgagc
     3241 ggaacgggcg tgccaccgca aacgacagaa gagtaatctt aattccgggt ttaagcccgg
     3301 aattaaaagt gctggcaaac gcaaaactgc ctgatgcgct acgcttatca ggcctacatg
     3361 gctcatgcaa tatattgaat ttgcacgatc ttgtaggccg gataaggcgt tcacgccgca
     3421 tccggcatga acaaaacgca cttcgtcgac aagttgggtg ccgggtttaa gcccggcatt
     3481 atttttatcc cggcaaaaaa cactcttcaa tacactgaat aaaagtgtgc atcgccgggc
     3541 taaccgcttt tccagcatgg tgtgcgcaca tagccgtaat ggtctgcgac tgttcgccaa
     3601 aaggcaattc aattaattct ccgctctcaa gctctttttc caccgcaaag cggggcaagt
     3661 aactgacacc gatattcgcc gcgacacaac gtttgatact ttcaatgctt aacagctcaa
     3721 tggtgttttc caccgtgatc cgccgctgac gcagcgtgct ctcaaatatc tgccggaaga
     3781 cacattgcgg ttcgttgata ataaagctac aggcgttatg tcttcccggc tcagtaaaat
     3841 cgacatctgc aatttgcggt gaagccacca gcaccagcga ttgttcaccc aactctcgtc
     3901 ggttcagggc atcatcattc cctacgcgat aaaagacgcc gacatcggcc tcatcattca
     3961 gtagcgcatc acggatcacg taacagttca gcgactgcaa cgataaacgc acttttggtg
     4021 cgcgttgccg aaaacgctgc aacacctgcg gcattcggta agagagcaac gtttcgcccg
     4081 aaacaacgcg tagttccccg tccggatctg accccttttt ggcagcctca cgaagcgtat
     4141 ccatcactcg ggtaagttca taaatgtgcg gcagcaactt ttttccttcg cgggtaaggc
     4201 acatccgtcg gccaattttc tcaaataact ggactgaaaa ctcctgctca agctgctgaa
     4261 tatgaaaagt caccgtcgat tgtgtacagc acaatttttg cgaagctcgc aaaaaggaac
     4321 cctcttccac cacggtttta agcgtaataa aacggcgcag atccataacc ccgaacctat
     4381 cgaaaatatc gaatctagaa tataaaaaca ttcatttttt taaatgttct gtgt
//
LOCUS       DAJVUK010000224         4429 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.226, whole genome shotgun sequence.
ACCESSION   DAJVUK010000224 DAJVUK010000000
VERSION     DAJVUK010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.226"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            127..456
                     /locus_tag="OQQ57_003997"
     CDS             127..456
                     /locus_tag="OQQ57_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HCS1958555.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
                     LLSMRKS"
     gene            704..949
                     /gene="nrdH"
                     /locus_tag="OQQ57_003998"
     CDS             704..949
                     /gene="nrdH"
                     /locus_tag="OQQ57_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HCS1958556.1"
                     /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            946..1356
                     /gene="nrdI"
                     /locus_tag="OQQ57_003999"
     CDS             946..1356
                     /gene="nrdI"
                     /locus_tag="OQQ57_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HCS1958557.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGMPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            1329..3473
                     /gene="nrdE"
                     /locus_tag="OQQ57_004000"
     CDS             1329..3473
                     /gene="nrdE"
                     /locus_tag="OQQ57_004000"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HCS1958558.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAYAHTSGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPVAGRINMSNLCSEIL
                     QVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT
                     SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            3483..4397
                     /gene="nrdF"
                     /locus_tag="OQQ57_004001"
     CDS             3483..4397
                     /gene="nrdF"
                     /locus_tag="OQQ57_004001"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HCS1958559.1"
                     /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPYALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
                     KSFAFDLLLELYDNELQYSDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSRIGN"
BASE COUNT         1095 a         1131 c         1129 g         1074 t
ORIGIN      
        1 cgggcctacc ttacctgatt gcgcattcac aacgctttca gaaaagtcca taaagccgcg
       61 atgaacctca gttaagaaaa ttatggtcta cactgaaaat tacatcgaat tctaatgggg
      121 gatcatatgt ttaaccgacc gaaccgcaac gacgttgatg atggcgtgca ggatatccag
      181 aatgatgtca atcaattagc tgacagcctc gaatctgtat tgaagtcctg gggcagcgac
      241 gccaaagggg aagctgaagc cgcacgcagt aaagctcagg cgttgctgaa agaaaccagg
      301 gcgcgaatgc atggtcgtac tcgcgtccag caagccgcgc gcgatgccgt tggctgcgcg
      361 gattcttttg ttcgtgaaag accctggtgt agcgtgggta cagcagctgc ggtaggtatt
      421 tttatcggcg cactgttaag catgcgcaaa tcgtagtgca aaaatgataa taaatacgcg
      481 tctttgaccc cgaagcctgt cttcggggtt tctttttgcc tggtgaatca caaaaatccc
      541 cctcccccgt cacgctcata tccagggtaa tttcgatcac tatttgctat atattgtgta
      601 gttgaatctt ttttcaacta catctagtat ctctgtatca acagagagac aacccgacgc
      661 gtatcatcgc gccgtatctt cattttaaac ggaaatacga atcatgcgca taactattta
      721 cactcgtaac gattgcgttc agtgccacgc caccaaacgg gcgatggaaa accgggggtt
      781 tgattttgaa atgattaatg tcgatcgcgt tcctgaagca gcggaagcgt tgcgtgctca
      841 gggctttcgt cagttgccgg tagtgattgc tggcgatctt agctggtctg gtttccgtcc
      901 ggacatgatt aaccgtctgc atccagcgcc acacgcggcc agtgcatgag ccagctcgtc
      961 tacttctcca gcagctccga aaacacgcag cgttttatcg aacgtttagg tatgcccgcg
     1021 gtgcgcatcc cgctcaatga gcgggaacgg attcaggtag acgagcctta catcctgatc
     1081 gtgccctctt acggcggcgg cggtacggct ggcgcggtgc cacgacaggt aattcgcttt
     1141 ttaaacgacg agcacaaccg ggcgttgctt cgcggcgtta ttgcttctgg taatcgcaac
     1201 tttggtgagg cgtatggccg cgccggagat gtgattgccc ggaaatgcgg cgtgccgtgg
     1261 ctgtaccgtt ttgaactcat gggtacgcaa agcgatatcg aaaacgttcg taaaggagta
     1321 accgaatttt ggcaacgaca accgcagaat gcctgacgca ggaaacgatg gattaccacg
     1381 cgctgaatgc gatgcttaac ctctacgata gcgcaggtcg cattcagttc gataaagacc
     1441 gccaggccgt tgacgccttt atggcgacgc atgtgcgtcc gaacagtgtg accttcagta
     1501 gccagcagca gcgcctgaac tggctggtca acgaaggtta ctatgatgaa agcgttctta
     1561 atcgctactc tcgcgacttt gtcattacgc tgtttgccta cgcacacacc agcggttttc
     1621 gtttccagac attcctcggg gcatggaagt tttacaccag ctatacgttg aagacattcg
     1681 acggtaaacg ttatctggaa gattttgccg atcgagtcac gatggtggcg ctgacgctgg
     1741 cacaaggcga tgcgacgctg gcgttgcaac tgaccgatga aatgctgtca ggacgctttc
     1801 agccagccac tccgacattc ctcaactgcg gtaagcagca gcgcggcgaa ctggtttcct
     1861 gttttctgct gcgtattgaa gacaatatgg agtcgattgg ccgggcggta aattccgcac
     1921 tgcaactgtc gaaacgcggc ggcggcgtgg catttttgct gtcgaatctg cgagaagcgg
     1981 gcgcgccaat taaacgtatt gaaaatcaat cttctggcgt aattccggtg atgaaaatgc
     2041 tggaagacgc attttcctat gccaaccaac tcggcgcgcg tcagggggca ggtgcagtct
     2101 atttacatgc tcatcatccc gatattctgc gttttctcga tacaaaacgg gaaaatgccg
     2161 acgaaaaaat ccgcattaaa acactgtcgc tgggcgtggt gatcccggat atcactttcc
     2221 atctggcaaa agagaatgcg cagatggcac tgttttcgcc ctatgacgtt gagcgagttt
     2281 atggcaagcc gtttgccgat atcgccatca gcgaacacta tgacgaactg gttgccgatg
     2341 aacgcatccg caaaaaatac ctcaacgccc gtgatttctt ccagcggctg gcagaaatcc
     2401 agtttgagtc cggctatccc tacatcatgt atgaagacac ggtaaaccgt gctaaccctg
     2461 tcgccgggcg cataaatatg agtaatctct gctcagagat tttgcaggtc aactgtgcct
     2521 cagagtatga cgagaatctc gactatgccc gcacaggcca tgatatctcc tgcaatttag
     2581 gttcgttgaa tattgcgcac accatggatt cccccgattt tgcccgcacg gtagagactg
     2641 ccgtgcgcgg tttaacggcg gtgtcagata tgagtcatat ccgcagcgtg ccgtccatcg
     2701 aagccggaaa tgccgcctca cacgccatcg gactggggca gatgaattta cacggctatc
     2761 tggcgcgaga aggcatcgct tatggttcgc cggaagcact ggatttcacc aatctctatt
     2821 tctatgccat cacctggcac gcactgcgta cctcgatgtt gctggcgcgc gaacgcggtg
     2881 aaaccttcgc cgggttcaaa cagtcacgtt atgccagtgg tgaatatttt agccaatatc
     2941 tgcaaggtaa ctggcagccg aaaacggcga aagttggcga actgtttgcc cgcagcggta
     3001 ttacgttacc tacccgtgag atgtgggcgc aactgcgcga cgacgtgatg cgctacggca
     3061 tttataacca gaatcttcag gcggtgccgc caaccggttc tatctcttat atcaaccatg
     3121 ctacgtcgag tattcatccg attgtggcga aagtagagat acgcaaagag ggcaaaacag
     3181 gacgcgttta ctaccctgcc ccgtttatga ctaacgagaa tctggcgctg tatcaggatg
     3241 cttacgaaat cggcgcagaa aagatcatcg acacctacgc cgaagcgact cgccatgtcg
     3301 atcaggggct gtcgctgacg ctgtttttcc ccgataccgc caccactcgc gatatcaaca
     3361 aagcgcagat ttacgcctgg cgcaagggta tcaaaacgct ctattacatt cgcctgcgtc
     3421 agatggcgct ggaaggcact gaaattgaag gctgcgtctc ctgtgcactt taaggaatat
     3481 ctatgaaact ctcacgtatc agcgccatca actggaacaa gatatctgac gataaagatc
     3541 tggaggtgtg gaatcgcctg accagcaatt tctggctacc agaaaaggtg ccgctgtcga
     3601 acgatattcc tgcctggcag acattaactg tcgtagaaca acaactgacg atgcgcgttt
     3661 ttactggcct gacgctgctc gacacgctgc aaaatgttat cggcgcgcct tcgctgatgc
     3721 cctatgcact cacgcctcat gaagaagcgg tattatcgaa tatcagcttt atggaagcgg
     3781 ttcatgcccg ctcttacagt tcgattttct cgacgctgtg tcagaccaaa gatgtcgatg
     3841 ccgcctacgc ctggagtgaa gaaaacgcac cgttgcagcg aaaagctcag attattcagc
     3901 aacattatcg cggtgatgat ccgctgaaaa agaaaatcgc cagtgtgttt cttgaatctt
     3961 ttttgttcta ttccggtttc tggctgccga tgtatttttc cagccgcgga aagctgacca
     4021 ataccgcaga tctgatccgt ctgattatcc gcgatgaagc agtccacggt tactacatag
     4081 gctataaata tcagaaaaac atggaaaaga tatctctggg acaacgtgaa gagttgaaga
     4141 gtttcgcctt cgatttgttg ctggaactct acgacaacga gttgcaatac agcgatgagc
     4201 tgtacgccga aaccccgtgg gctgacgatg tgaaagcgtt tctctgttac aacgccaata
     4261 aggctttgat gaatctgggc tacgaaccgt tatttcccgc agaaatggcg gaagtgaatc
     4321 cggcaatcct cgccgcgctt tcgccgaatg ccgatgaaaa tcacgatttc ttttccggtt
     4381 cacgtatagg aaattgaaaa actaagcgat acccctgtcc gcgccttat
//
LOCUS       DAJVUK010000225         4403 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.227, whole genome shotgun sequence.
ACCESSION   DAJVUK010000225 DAJVUK010000000
VERSION     DAJVUK010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4403
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.227"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            227..599
                     /locus_tag="OQQ57_004002"
                     /pseudo
     CDS             227..599
                     /locus_tag="OQQ57_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1161..2108)
                     /gene="icsP"
                     /locus_tag="OQQ57_004003"
     CDS             complement(1161..2108)
                     /gene="icsP"
                     /locus_tag="OQQ57_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease IcsP"
                     /protein_id="HCS1958560.1"
                     /translation="MKLKFLVLALCVPAIFTTHATTNYPLFIPDNISTDISLGSLSGK
                     TKERVYHPKEGGRKISQLDWKYSNATIVRGGIDWKLIPKVSFGVSGWTTLGNQKASMV
                     DKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWLLNNLDYRLGLIAGYQESRYS
                     FNAMGGSYIYSENGGNRNKKGAHPSGERTIGYKQLFKIPYIGLTANYRHENFEFGAEL
                     KYSGWVRSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISN
                     KKGDTSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF"
     gene            complement(3489..3641)
                     /locus_tag="OQQ57_004004"
                     /pseudo
     CDS             complement(3489..3641)
                     /locus_tag="OQQ57_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            3697..4389
                     /gene="ospZ"
                     /locus_tag="OQQ57_004005"
     CDS             3697..4389
                     /gene="ospZ"
                     /locus_tag="OQQ57_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     methyltransferase OspZ"
                     /protein_id="HCS1958561.1"
                     /translation="MISPIKNIKNVFPINTANTEYIVRNIYPRVEHGYFNESPNIYDK
                     KYISGITRSMAQLKIEEFINEKSRRLNYMKTMYSPCPEDFQPISRDEASIPEGSWLTV
                     ISGKRPMGQFSVDSLYHPDLHALCELPEISCKIFPKENSDFLYIIVVFRNDSPQGELR
                     ANRFIELYDIKREIMQVLRDESPELKSIKSEIIIAREMGELFSYASEEIDSYIKQMND
                     RFSQIKARMSVT"
BASE COUNT         1351 a          863 c          851 g         1338 t
ORIGIN      
        1 gcgatctggt tcaacaatat gcagatggta cacaacctct ttaaccagcc catccggatt
       61 attcagagcc cttccgcaat ccggaataaa agtgctgttt taccgtgaac cctctgaaaa
      121 tcagcgagca gtgttttaac cagccgacgt tcagagcgta ctgacagacg gtggacaatt
      181 tgaataaaca gttcaatcag accgtagatg ctctcccgtt ggcgacatgc tgggagcggt
      241 ggaacaccgc ttcggcaacg agcttccggc gtctccagtg aagtgactga cggataatgg
      301 ttcatgctac cgggctaatg aaacacgcca gttcacccgg atgttgggac tttgttgaac
      361 cgaagaacac ggtggtgcgg agtccggaga gtaacagaat agcaaagagc ttcgtgaaaa
      421 caataaagtg tgactacatc agtatcatgc ccaaacctga cgggttaacg gcagcaaaga
      481 accttgcaga ggcattcgag cattataacg aatggcatcc gcatagtgcg ctggattatc
      541 gctcgccacg ggaatatctg cggcagcggg ccaatgataa caggtgtctg gaaatatagg
      601 ggcaaagcca cccacgaacg atccagcata taatcaagaa attagatttc atttaacata
      661 agatagatta tgtgcaccaa gaggcatttc cttaatttct gaatttacag gctcttttgc
      721 tctctttgct atgctgtgga tttggaaaga tagagtgctg gctgattatt taggtatttt
      781 catcagcatg tccctgatag cactgttcca tcagcgcttt caggcgataa tagtagacct
      841 tgggtagcct ctgctcatgt gtaacttgat accccgagaa cagccacgat gctctaagcg
      901 gttcttattt ctccggtctc agggtcggta atgccaacag taagtccaca gtaatcaacg
      961 aagagttttt tgaaccgccc cggaaatcct ggagactaaa cgccctgaga aagaggtaaa
     1021 cagaatgact aaaaatacac gtttttcccc cgaagtccgt caacgggcag ttcgtatggt
     1081 tctggaaagt cagggcgaat atgactcaca atgggcggca atttttagcc atgaaaacgt
     1141 aatcaactcg gtgaaccaat tcaaaaaata tactttatac ctgcggaagt gagaaaacca
     1201 atatattcaa tacttgcact atttttaatg gtgccagata tattggtact ttgctcataa
     1261 agagatgtat cacctttttt attagaaatg taatttctgg agccttctat ataaaatttt
     1321 gcactggggg tgacatagta tccaatattc gcagcaacag agcagtaatt ttggtttttt
     1381 atttcatctt taaaaattgt ctcagtctga tagtgtttat ctgtatcaga tgaacgaacc
     1441 caaccactat atttcagttc tgctccaaac tcaaaattct catggcggta attagcagtt
     1501 aatccaatat aaggtatttt gaagagctgt ttgtaaccta ttgttctttc accactagga
     1561 tgtgcccctt ttttattcct gttccccccg ttttcactat aaatataact ccctcccatt
     1621 gcattaaaac tgtaacgact ctcttggtaa cctgctatta gtccaagtcg ataatccaaa
     1681 ttatttaata accaaccttt aagattcagc tcgaattcgt tagcatcacg gagatgcgta
     1741 ttgggatgcc agctctggtc ggtccatacc tgaggggtat tggaattgtt ccagtcttta
     1801 tcaaccatgc ttgctttctg gttacctaaa gtagtccaac cggaaactcc gaaagacact
     1861 tttggaatta gcttccaatc gatgccacct ctaacaatag tcgcattact gtatttccag
     1921 tccagttgac taatttttct ccccccttcc ttgggatgat aaacgcgttc ttttgttttg
     1981 ccactcagag atcctagact aatatccgta ctgatgttat ccggtatgaa aagtggatag
     2041 ttagtggtag catgtgtagt aaagatcgca ggtacacaaa gtgcaagtac aaggaatttt
     2101 aatttcatcg agaactctac ttttttggtt gaaatgtcca tgatcttctt actttataag
     2161 ataaacgtca atgccaagca ttattttaat taaatatttg tttatgttac caagaacata
     2221 tcttttatta taatatttat tgaacttttg taaaaataaa aaaatacctc attgtgcgaa
     2281 taaagtaacg ggggccatag atttctctac ctaccttttg gtgttcatac ctgaggctga
     2341 tagtttcagg attccgcgac aattctactc accttcttgt tctctcgcca atatgaaatc
     2401 aatcagaaaa gcgttccata agaacaacga taagacaata aattgtcatc acggctgcaa
     2461 tagccaacgt gcctttcagt accaacatga caacctcctg tatttgacgt aacgtgtgct
     2521 gataaatatg tatttgtatc tcaactgact caatacaaca cttaagtata gtttttcaga
     2581 ttttgttttt cccgtgaaat attatggaaa tggcagaagc aatacattga attccgattc
     2641 gagtgaatac ggctagcggg cacctcactt tagcactgaa gccatcaact tttatttgac
     2701 ttatttcaat ggaaagcttt ctcactatca gtacaggtaa ttcccatcct tttaaagtcg
     2761 agagtcagac tgcgactaat acagttaaag tgaccaaact cagttatcct ctacacattt
     2821 tacctcatgt ttacttggac aattcattgg tgcttttata aaagaataaa tattctacta
     2881 atttaatgca tcacctaaaa tagtattttt tataatagaa ctgtatctat agtatattat
     2941 taaagcttaa ttatttatta tgctttaatg tggttgtccg attaaggact aatccttgaa
     3001 aacgccgtat agggcgggag ttcactctat tgcgataacg taaccgtaca atattgtgcg
     3061 tttcccaaat tgaccactac tgaactattc tgggatttaa atgcaataaa atggttggtt
     3121 gaaggtcgtg gtgatgatgt tagtcctttt gagaatattc cagtgccaga tcttacttat
     3181 aataaagagg cttggcagtt tggataagct attgtcctta ttccactaat acaaactttt
     3241 tgtaaagtat attaaatata cttcatttca tactgaaatc cccggaagta ttcaatcaaa
     3301 caattacacc ataaaaggaa gagggagccc caattaagtt atcaagcatg tttatgatac
     3361 ctgcagggta taaattttct ggctgcaagc agacacatat aaaacgtctt tattgatcct
     3421 acccacataa tatggacgca gtcgtaagtg aggctctgtg agcctaccca cgtaatatgg
     3481 acacaggcct aagcgaggtt ctggttttca aattgttccg gactgaggcc gccacaccaa
     3541 cggtgccgtc gccagcgatt gtaatcgcac tcgatataat taaacactgt tgcccgcact
     3601 atttcccgat agataaagtg ttctccgtgg agacattcca cttaggaaca attatattgt
     3661 tcatggtaat gtttatattt gagtatagag attaaaatga ttagtcccat caagaatatt
     3721 aagaacgtat ttccaataaa tactgcaaat actgaatata tagtgagaaa tatttatcct
     3781 agagttgaac atggttactt taatgaatca ccaaacatat atgacaagaa gtatatctct
     3841 ggtataacca gaagtatggc acaattaaaa atagaggagt ttattaatga gaaatccaga
     3901 cgacttaatt atatgaagac aatgtattct ccatgtccgg aagattttca gcctatttcc
     3961 agagacgaag ccagtatacc ggaaggaagc tggttgacag ttatatctgg aaaacgtcct
     4021 atggggcaat tttctgtgga tagtttgtac catcctgact tacatgcatt atgtgagctc
     4081 ccagagatta gttgtaagat cttccctaaa gaaaatagtg attttttgta tataattgtt
     4141 gtattcagaa atgattctcc ccaaggagaa ctacgggcaa atcggtttat agaactatat
     4201 gatataaaaa gagagattat gcaagtgtta agagatgagt cgccagagtt aaagtctatt
     4261 aaatctgaga ttattattgc tcgtgaaatg ggagaacttt ttagttatgc atcagaggaa
     4321 atagatagct acataaaaca aatgaatgac aggttttctc aaatcaaggc tcgaatgtct
     4381 gttacttaat gtatattaat tgt
//
LOCUS       DAJVUK010000226         4388 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.228, whole genome shotgun sequence.
ACCESSION   DAJVUK010000226 DAJVUK010000000
VERSION     DAJVUK010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4388
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.228"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..358
                     /locus_tag="OQQ57_004006"
     CDS             <1..358
                     /locus_tag="OQQ57_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958562.1"
                     /translation="WPGEGGEGHLSSFFVQTDKASINVAYHHTVNQQKELGTFGAFDH
                     DWHTLAFKFKGSNSINVTPVLDGVDGQAFDLVKWANTANGLNRFVITDITGSAETYPV
                     LIDTVEVKANKAGAAA"
     gene            498..680
                     /locus_tag="OQQ57_004007"
     CDS             498..680
                     /locus_tag="OQQ57_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001304601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1378 family protein"
                     /protein_id="HCS1958563.1"
                     /translation="MTFIHQVMLYFCTAVCVLYLLSGGYRAVRDFWCRQIDKRAAEKI
                     SASQSAGSKPEEPVTP"
     gene            604..951
                     /locus_tag="OQQ57_004008"
     CDS             604..951
                     /locus_tag="OQQ57_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF826 domain-containing protein"
                     /protein_id="HCS1958564.1"
                     /translation="MIKGPLRKSAPVSQPEANPKNPLLLNNPFQRENPMSEITSLVTA
                     EAVKEVLRSEEVRSALKQKLRQNLESRLDAEVDAILDELLGVAAVPEPEGIAGDGSAS
                     DGGEPTPDSDMMM"
     gene            1028..1243
                     /locus_tag="OQQ57_004009"
     CDS             1028..1243
                     /locus_tag="OQQ57_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II holin family protein"
                     /protein_id="HCS1958565.1"
                     /translation="MYQMEKITTGVSYTTSAVGTGYWFLQLLDRFSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            1248..1592
                     /locus_tag="OQQ57_004010"
     CDS             1248..1592
                     /locus_tag="OQQ57_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HCS1958566.1"
                     /translation="MKKKYELVVKGINNYPNKITVTVALEIGGYPSLLLPDVAISLDR
                     TEDATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPG
                     IITGSLKTPPLA"
     gene            1643..2176
                     /locus_tag="OQQ57_004011"
     CDS             1643..2176
                     /locus_tag="OQQ57_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCS1958567.1"
                     /translation="MNTKIKYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDSKPVVPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWDIDR"
     gene            2332..2514
                     /locus_tag="OQQ57_004012"
     CDS             2332..2514
                     /locus_tag="OQQ57_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310767.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958568.1"
                     /translation="MAKYKRILLRLTMKNGLELKAPVTDDISRALAFAIKWVAVGVAV
                     SPMLYGLAKLVIALKS"
     gene            2841..2993
                     /locus_tag="OQQ57_004013"
     CDS             2841..2993
                     /locus_tag="OQQ57_004013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001228697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rz1 family lipoprotein"
                     /protein_id="HCS1958569.1"
                     /translation="MLPLVVSACGSTPPAPVPCVKPPAPPEWIMQPAPDWQTPLNGII
                     SPSESG"
     gene            3079..3303
                     /locus_tag="OQQ57_004014"
     CDS             3079..3303
                     /locus_tag="OQQ57_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958570.1"
                     /translation="MKKLLVTVKPFQGTIPFRILQRGRVLVEGSFSGKCTQLHSRTFQ
                     VNATNEELTVECTMNAAKCRMVSAALQPVC"
     gene            3648..3974
                     /locus_tag="OQQ57_004015"
     CDS             3648..3974
                     /locus_tag="OQQ57_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000828066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HCS1958571.1"
                     /translation="MKRNLPLIILLSSLVMGCTQHKTDMPRQLVKALPQYPAYAAANY
                     IKGRVDVKFDIGADGTVTRIEFIRSEPHHLFDEQVVKAMAKWRFEKDRPCKGVKKTFI
                     FSPSAP"
     gene            complement(4106..4306)
                     /locus_tag="OQQ57_004016"
     CDS             complement(4106..4306)
                     /locus_tag="OQQ57_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcI/YnfO family protein"
                     /protein_id="HCS1958572.1"
                     /translation="MSSKNRTRRTTTRNIRFPNQMIEQINIALDLKGSGNFSAWVIEA
                     CRRRLATDATHLRPASMKNNEK"
BASE COUNT         1120 a          937 c         1208 g         1123 t
ORIGIN      
        1 atggccgggt gagggtggtg aaggccatct gagttctttc tttgtccaga cagataaagc
       61 cagtattaat gttgcatacc atcatacagt taatcaacaa aaagaacttg gcacgtttgg
      121 cgcattcgac catgactggc atacgcttgc atttaaattt aagggcagta acagcattaa
      181 tgttactccg gtgcttgatg gtgtggatgg acaggcgttt gacctggtga aatgggccaa
      241 tactgctaat ggactcaaca ggtttgtcat tacggatatt acaggtagtg cagaaaccta
      301 ccctgtactt attgatacgg tggaagttaa agcaaacaaa gctggagcag ccgcataatt
      361 gctaaaaaaa gccgccagcg gcaggaatgg aagctggcgg aggtaatccc aatggagaat
      421 gtaaagaaaa gatgctttcg tacattggtt ttttaaatga aaacaattct cattgtcaac
      481 cataacggta agaaattatg acatttattc atcaggtgat gctgtacttc tgtacggcgg
      541 tctgtgtgct gtatcttctt tcgggtgggt acagggctgt gcgcgatttc tggtgcaggc
      601 agattgataa aagggccgct gagaaaatca gcgccagtca gtcagccgga agcaaacccg
      661 aagaacccgt tactccttaa caaccccttt cagcgagaaa atcccatgtc agaaatcaca
      721 tccctggtca ctgcagaggc agtgaaggaa gtcctgcgct ctgaagaagt ccggagcgca
      781 ctgaaacaga aacttcgcca gaatcttgag tcgcgtcttg atgcagaagt ggatgccatt
      841 ctggatgagc tgctgggcgt agcagcggtt cctgagccgg aaggtatcgc gggtgacggg
      901 agtgcttcag atggcggtga acctacacct gacagcgaca tgatgatgta agcatgcgca
      961 agggaccatc ggtgtgtgcc ggtggtcttt atattgttgt gagcttccgg attgcgggag
     1021 acggggtatg taccagatgg aaaaaatcac aacaggtgtg tcatacacca cgtcagcggt
     1081 gggaacgggc tactggttcc tgcagttgct ggacaggttt tccccgtctc agtgggcggc
     1141 aataggcgtg ctggggagtc tgttgtttgg gctgctgaca tatctgacta acctgtattt
     1201 caaaatcaga gaggaccgtc gtaaggcggc gcggggagag taaagcgatg aagaaaaaat
     1261 acgaactggt tgttaaaggg ataaataatt acccgaataa gattactgtt actgtggcac
     1321 tggaaattgg tgggtatccg tcactgttgt tgccagatgt ggcgattagt cttgaccgta
     1381 ctgaagatgc cacgctggag ttttacgaag ctgaggcgaa aaagcaggcg aagcagtttt
     1441 tcatggatgt tgctgccggg ttatgtgaag gggatggtcc gttgccggaa aagcgccccg
     1501 taattttaga ggcgcaggat gtgttgataa cctacagagg aaaactaccg ggaataatta
     1561 ctggttctct gaagactcca ccgctggcct gaagacttaa catatccagg gatttgaaat
     1621 cgataaaccc tgataaatat ccatgaacac caaaatcaaa tacggcctgt cggctgccgt
     1681 tctggcgctg attgccgcag gtgcgcctgc gcctgaaatc ctcgaccagt ttctggatga
     1741 aaaggaaggt aaccacacca cggcataccg tgatggcgcg ggtatctgga ccatctgccg
     1801 cggtgccatc ctggtggata gtaaacctgt cgtcccgggc atgaagttgt cgaaggaaaa
     1861 atgcgaccag gtcaacgcca ttgagcgtga taaggcgctg gcatgggtgg agcgcaatat
     1921 taaagtgccg ctgaccgaac cccagaaagc gggtatcgcg tcattttgtc cctataacat
     1981 tggccccggt aagtgtttcc cgtcgacgtt ttacagacgg attaatgctg gtgaccgcag
     2041 gggagcatgc gaagcgattc gctggtggat taaggacggt ggcagagact gccgtatccg
     2101 ctcaaataat tgctacggtc aggtatcccg gcgagaccag gaaagtgcgc tggcgtgctg
     2161 ggacatcgac agataagcag aatattttgc tgaaaataag gcatgagcac gcggacggat
     2221 aacacgaaat cctgcgaact ggcgaaacgt aagtgaataa aagtaaaaac cccgtttgtt
     2281 ggcaccaggc ggggttttgt gtttctgacc ttgagtaagg caagggagaa catggcgaag
     2341 tataaacgaa ttctgttgag gttgaccatg aaaaacggcc ttgaactgaa agcgcctgta
     2401 actgatgaca tcagcagagc actggctttt gccattaagt gggtggcggt cggtgttgct
     2461 gtgtccccga tgctgtatgg gctggcaaaa ctggtcattg cgttgaaatc gtgaagggag
     2521 gattaagcat gtcagacaaa ctcataacgc tggcgaagat cctctgtgta attgtcggca
     2581 tttcattttc actaatgctg gttgctcttt ttctttccat ggcctggatg atgttgtctt
     2641 cgtcggggct gctggggtga acataaaccg aatgctttcc gcgtttaccg ttattctgct
     2701 ggtggtctgt ggtgcgctgt ggctggcaac agaccattac cgtgataacg ccatcaccta
     2761 caaagcgcag cgcgataaaa aagccagaga gctggagctg gcaaacgcaa ccattactga
     2821 catgcagcag cgccagcgtg atgttgccgc tggtcgtaag cgcctgcgga tcaacgccac
     2881 ctgctccggt accgtgcgtg aagccaccgg cacctccgga atggataatg caaccggccc
     2941 ccgactggca gacaccgctg aacgggatta tttcaccctc agagagcggt tgatgacaat
     3001 gcagaagcaa ctggaagggg cgcaggaata tatccgcact cagtgtatta actagtattt
     3061 ttgttatccg gagaatgcat gaagaaatta ctggtaaccg taaagccttt tcagggaaca
     3121 attccgttcc gtattttgca gcgtggtcgt gttcttgttg aaggttcgtt cagtggtaaa
     3181 tgtacgcaat tacactcccg gacctttcag gtgaatgcca cgaatgaaga gctaaccgtt
     3241 gagtgtacga tgaatgccgc taaatgccgc atggtatccg ctgcattaca gccagtgtgt
     3301 tgagcgacct tattaaccat gcgcggtatt gtcgccgtat ccccgcatta acagagaccg
     3361 cagcccgacc gggagactcc tctgcgcgag tgtgcgggga taatcaaaaa cgatacacac
     3421 cggggtttac cgcgttaacg gagcgcggcg ttgtcccctc atggtcgctg gtccggtgcg
     3481 atggtggaag aaaccggacg atgtgttacc tcgcaagctc tgttatgtca tgtgtctgat
     3541 ttgtgattta agtcggataa ttgtcgttgc cattaagcag aggattgatg accgacaggg
     3601 tggcattgtt agaataagac ttattcttat ctgtgccggg aatgaaaatg aaaagaaacc
     3661 ttccgttaat tattttgttg tcttctctgg ttatgggctg tacgcaacat aaaacagata
     3721 tgccccgaca gttggttaag gcattaccac aatatccggc ctatgcagcg gcaaattata
     3781 taaagggacg ggttgatgtg aagtttgata ttggtgctga tggtactgtc acccgaattg
     3841 agtttatccg ttcagagccg caccatttgt ttgatgagca ggttgtaaag gcgatggcaa
     3901 aatggcgatt tgagaaggac aggccgtgta aaggcgtgaa gaaaacgttt atctttagtc
     3961 cttctgcacc ctgattattt catcagaaat taattatcac tctgttgtta ttctgtacat
     4021 cccggcaggg taagtcttgt tccgtcggat atgaagatga aatattgttg gaggacagtg
     4081 ggtacctgct cctgtaaccg aacgttcatt tctcgttatt tttcatgctg gccgggcgca
     4141 gatgcgttgc atctgttgcc agccttctcc tgcaggcttc aataacccac gctgaaaagt
     4201 ttcctgaacc tttcagatca agagcgatgt taatttgttc aatcatctgg tttggaaatc
     4261 ggatgttgcg ggttgttgtt ctgcgggttc tgttctttga tgacataatg tttccccata
     4321 ttcagtgttg ctgatttgta ttatctgaag ttgcttttac gttaatttga tgcagatcaa
     4381 tcaatacg
//
LOCUS       DAJVUK010000227         4382 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.229, whole genome shotgun sequence.
ACCESSION   DAJVUK010000227 DAJVUK010000000
VERSION     DAJVUK010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4382
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.229"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(27..1241)
                     /gene="ydcO"
                     /locus_tag="OQQ57_004017"
     CDS             complement(27..1241)
                     /gene="ydcO"
                     /locus_tag="OQQ57_004017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BenE family transporter YdcO"
                     /protein_id="HCS1958573.1"
                     /translation="MLRCLYAITYEVTMRLFSIPPPTLLAGFLAVLIGYASSAAIIWQ
                     AAIVARATTAQISGWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLT
                     LNEAIGVFIVTNALIVLCGITGLFARLMRIIPHSLAAAMLAEILLRFGLQAFASLDGQ
                     FTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVIVIAQGDVVTTDVVFKPVLPTYITPD
                     FSFAHSLSVALPLFLVTVASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVY
                     SVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLLAGLFGSAITEMMAALPVSWIQ
                     MLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCY
                     VVLNLIADRNQY"
     gene            1294..1830
                     /gene="sutR"
                     /locus_tag="OQQ57_004018"
     CDS             1294..1830
                     /gene="sutR"
                     /locus_tag="OQQ57_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SutR"
                     /protein_id="HCS1958574.1"
                     /translation="MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNE
                     SSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF
                     SIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR
                     NGGEQTVHFHSLIHYPRS"
     gene            1903..3864
                     /gene="rlhA"
                     /locus_tag="OQQ57_004019"
     CDS             1903..3864
                     /gene="rlhA"
                     /locus_tag="OQQ57_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA 5-hydroxycytidine C2501 synthase"
                     /protein_id="HCS1958575.1"
                     /translation="MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
                     SNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMG
                     ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATI
                     EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
                     MKDNDQTANLGALIDAGVRSFKIEGRYKDMNYVKNITAHYRQMLDAIIEERGDLARAS
                     SGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDV
                     AVTEPLANGDGLNVMIKREVIGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNR
                     NLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNA
                     EKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASY
                     QRGSRKPVAEPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPV
                     MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKN
                     HILKMPLPGSVVASVSPDELLKTLPKRKG"
     gene            complement(3956..4186)
                     /locus_tag="OQQ57_004020"
     CDS             complement(3956..4186)
                     /locus_tag="OQQ57_004020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncJ family protein"
                     /protein_id="HCS1958576.1"
                     /translation="MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEAD
                     SDELRAVAEESAEGLREHFYWQKSRKPEAGQR"
BASE COUNT         1136 a         1129 c         1088 g         1029 t
ORIGIN      
        1 ccacgtcttt cagggcgtgt aggatgtcaa tattggtttc tgtcagcgat taaattcaac
       61 accacgtaac aaacgcctcc ggcaattaat ccccagaacg cagaaccaat cccgaccagc
      121 gtcaatccac ttgccgttac cagaaatgcc accaccgccg cgtcgcgctc acgctcatta
      181 tgcagcgcct gatacaaact gccgccaatg gtactcaaca gcgccagacc tgccagcatc
      241 tggatccaac ttacgggcag ggcagccatc atctcggtaa tggcactacc aaacagacct
      301 gcgagcaaat agaaaatgcc tgcaacggca gctgccagcc aacgttgatc tttatccgga
      361 tgcgcttccg ggctttggca aatagccgcg gtgattgccg caataccgac ggaataaacg
      421 ccgaaagggg aaaaaaccag tgccagcaat ccagtaaata caattaatgg cgaaacagga
      481 gccgaatatc cagctgcttt cattgctgcg atacccggtg cgttttgcga tgccaccgtc
      541 accagaaaaa gggggagtgc aacgctcagg ctgtgagcaa acgaaaaatc aggggtaata
      601 taagtgggga gaacgggttt aaagacaaca tcagttgtga caacgtcacc ttgcgcgatg
      661 acgatcacga tcccaataat catcgcggca attaccgcat agcgcggcgc aacggccttg
      721 gttgccagcc ataccagcaa catacttcca cacaacgtaa attgaccgtc cagactggca
      781 aacgcctgta aaccaaagcg taataaaatc tcggcaagca ttgccgccgc aagcgagtgc
      841 ggaataatgc gcatcagacg agcaaagagt cccgttatgc cgcagaggac tattaacgcg
      901 ttggtgacaa taaaaacgcc gatggcttcg ttaagtgtta gtccctgcaa tccggtgacc
      961 aacaaagccg cgccaggcgt tgaccatgcg gtgagaacag gtacgcgata ccataatgtc
     1021 agagtcagcg tactgacgcc cattgccagc cccagcgccg tcatccagcc agagatttgt
     1081 gcagtggtgg ctctggcgac aatcgctgct tgccagatta ttgccgctga actggcgtag
     1141 ccaattaata ccgccagaaa ccccgccagt agcgtgggtg gaggaataga aaacagacgc
     1201 atagtcacct cgtacgttat agcgtacagg caccgtagca tttgtccgtt ataacgcaca
     1261 agtgataaac ttccgttttg ccggaggagt cgcatggaaa atctcgctcg ctttttatcc
     1321 accacactta aacaactacg ccagcagcgc ggctggagtc tttcgcgact ggcagaagcg
     1381 acgggcgttt ctaaagcaat gttagggcag attgagcgta atgagtccag tccgacggtc
     1441 gcgacattat ggaaaattgc caccgggttg aacgtaccat tttcaacatt tatttctccg
     1501 ccgcagtccg ctacgccttc agtttatgat ccacaacagc aggcgatggt gatcacttcg
     1561 ctgtttcctt atgatccaca actctgcttt gaacacttct cgattcagat ggcatctggt
     1621 gcaataagcg aatcgacgcc ccatgagaag ggggtaatcg aacatgtcgt cgtcattgat
     1681 ggacaacttg atctgtgcgt tgatggggaa tggcagaccc ttaattgtgg ggaaggcgtt
     1741 cgatttgctg cagacgtcac gcatatctat cgtaatggtg gggagcaaac cgtacatttt
     1801 cattccctca tccattaccc gcgcagttaa gcgggaaaac tatttcgcaa cgtcgcgctt
     1861 gtggctaaaa tagccgccat ttttcagcta ctggataaga atgtgaccgt atcttctcat
     1921 cgacttgaac tgttaagccc ggcacgcgat gccgccattg cccgcgaagc tattttgcac
     1981 ggtgccgatg ctgtttatat cggcggccct ggttttggtg cccgtcataa tgccagtaat
     2041 agcctgaaag atattgccga gctggtgccg tttgcccatc gttatggtgc aaaaattttc
     2101 gtcacgctta acaccatttt gcatgatgat gagctggaac ccgcgcaacg gctgattact
     2161 gacctctacc agaccggtgt cgatgcgctg attgttcagg atatggggat tctggaactt
     2221 gatattccgc cgattgaact gcacgccagt acgcagtgcg acattcgtac agttgaaaaa
     2281 gcgaagttcc tctctgatgt tggcttcacg cagattgtgc tggcgcgaga gctgaatctt
     2341 gatcagatcc gcgcgattca ccaggctacg gacgcgacca ttgaattctt tattcatggg
     2401 gcactgtgcg tggcctattc gggtcagtgc tacatttctc atgcgcaaac agggcgtagc
     2461 gccaaccgtg gcgattgctc gcaggcgtgc cgtttgccat acacattgaa agacgatcag
     2521 gggcgggtgg tttcctatga aaaacatctg ctgtcgatga aagataacga tcagactgcc
     2581 aacctcggcg cgctgattga tgctggtgta cgctccttca agattgaagg tcgttacaaa
     2641 gatatgaact acgtgaagaa tatcaccgcc cattatcgcc agatgcttga tgccattatt
     2701 gaagaacgtg gcgatctggc gcgcgcttca tcaggtcgta ctgaacattt ctttgttcca
     2761 tcgacggaaa agactttcca ccgtggtagc acagattatt ttgtgaatgc ccgtaaaggc
     2821 gatattggcg cgttcgattc gccgaaattt atcggcctgc cggtgggtga agtattgaaa
     2881 gtggcgaaag atcatctcga tgttgccgtc accgagccac tggcaaatgg tgatggcctg
     2941 aacgtgatga ttaaacgtga agtcatcggt tttcgtgcca atacggtcga gaaaaccgga
     3001 gaaaatcagt accgcgtctg gcccaatgaa atgccagcag atttgcacaa aattcgtcca
     3061 catcacccac taaaccgtaa tcttgatcat aactggcagc aggcactgac aaaaacctcc
     3121 agcgaacgtc gggtggcggt agacattgaa ctgggcggct ggcaggaaca actgattctg
     3181 accctcacca gtgaagaggg tgtcagcatc acgcatacgc tggacgggca gttcgacgaa
     3241 gccaataacg ccgaaaaagc aatgaacaat ctgaaggatg gtctggcaaa actggggcaa
     3301 accctctatt acgcccgcga tgtgcaaatt aatttgccgg gggcgctgtt tgtaccaaac
     3361 agtctgttaa accagttccg ccgtgaagct gctgacatgc tggatgctgc gcgtcttgcc
     3421 agttaccagc gcggcagccg taaaccggtt gctgagcctg cgccggttta tccgcaaacg
     3481 catctgagtt tcctcgcgaa cgtatacaac cagaaagcgc gtgaatttta tcatcgctat
     3541 ggtgtgcagc tgattgacgc ggcgtatgag gcacatgaag agaagggcga agtcccggtg
     3601 atgatcacca agcattgtct gcgctttgcc tttaatctgt gcccgaaaca ggcgaaaggc
     3661 aatatcaaaa gctggaaggc gacgccaatg caactggtta acggcgatga agtattaacg
     3721 ctaaagtttg attgccgccc atgcgagatg cacgtcattg gcaaaatcaa aaatcacata
     3781 ctgaaaatgc cgttaccggg aagcgtagtg gcatccgtaa gtccggatga gctgctgaaa
     3841 acattgccta agcgaaaagg gtaaaacgcc agttttctgg ttactcacaa ctcattgaat
     3901 ctgcatgata ttgcctgccg ggtaaggcgt cacgccgcat ccggcatcaa acgactcaac
     3961 gttgtcccgc ttctggtttg cgcgattttt gccagtaaaa atgctcgcgc aaaccttccg
     4021 ccgactcttc cgccacagca cgcaattcat cgctgtccgc ttcatgacgc agctgatgat
     4081 ccacattctt tacccacaca aattcatgtc ctttgtgccc tgccatgagt tgtcctgaga
     4141 acagcgcaca cgttaataag acaaccgata acgccttcgt aaacatcctg ccaccttttt
     4201 cttacctttt gccgctatga tgccgatcgt ttcttgaggt tattattcag ttttgcaaat
     4261 tagcgcaaag aaattctgga atcttccttc ctgattttgc attgcattct gtcgttgcgg
     4321 cgatttagtg ctattttcga gcaaattaca cacagaggta aacactaatg tttactttgt
     4381 tg
//
LOCUS       DAJVUK010000228         4378 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.230, whole genome shotgun sequence.
ACCESSION   DAJVUK010000228 DAJVUK010000000
VERSION     DAJVUK010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4378
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.230"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(61..723)
                     /gene="exoX"
                     /locus_tag="OQQ57_004021"
     CDS             complement(61..723)
                     /gene="exoX"
                     /locus_tag="OQQ57_004021"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HCS1958577.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWSFNNLDSMSPELRLTLKHYLE
                     NT"
     gene            complement(747..1403)
                     /locus_tag="OQQ57_004022"
     CDS             complement(747..1403)
                     /locus_tag="OQQ57_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HCS1958578.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLACDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
                     "
     gene            complement(1505..1735)
                     /gene="holE"
                     /locus_tag="OQQ57_004023"
     CDS             complement(1505..1735)
                     /gene="holE"
                     /locus_tag="OQQ57_004023"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HCS1958579.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
                     PEHLRSWFRERLIAHRLASVKLSRLPYEPKLK"
     gene            1874..2248
                     /gene="yobA"
                     /locus_tag="OQQ57_004024"
     CDS             1874..2248
                     /gene="yobA"
                     /locus_tag="OQQ57_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HCS1958580.1"
                     /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            2252..3119
                     /gene="copD"
                     /locus_tag="OQQ57_004025"
                     /pseudo
     CDS             2252..3119
                     /gene="copD"
                     /locus_tag="OQQ57_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
     gene            3132..3473
                     /locus_tag="OQQ57_004026"
     CDS             3132..3473
                     /locus_tag="OQQ57_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HCS1958581.1"
                     /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSL
                     APFIERAEKLC"
     gene            complement(3855..>4378)
                     /locus_tag="OQQ57_004027"
     CDS             complement(3855..>4378)
                     /locus_tag="OQQ57_004027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001189081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1958582.1"
                     /translation="NCIREAADQLPAWFPLAMDLALVTGQRREDITNMRFSDIYDDRL
                     HIRQIKTGMMIAIPLSLSLPVAGLRLGAVVEQCRMVSRGDYLISAGIRKNSPDGSIHP
                     DGLTKKFVAARKLTGIQFSENPPTFHEVRSLAGRLYKETCGEEFAQRLLGHTSEKTTK
                     MYLDEREKTYLLL"
BASE COUNT         1090 a         1056 c         1079 g         1153 t
ORIGIN      
        1 gatggaatat gcttttctgg tcgcgctggc gcagggaaca ttacccgcta cgcctgcgga
       61 ttaagtattt tccagataat gtttcagtgt taaacgcagc tccgggctca tgctgtccag
      121 gttattaaat gaccagcgca gatagcccgg atcgcgttcg gcaacgtcgg aaaccgcttt
      181 gccacggtat ttgccaaagg tgaaggtcgt catcaacgac ggacgtccgg tgatatcggc
      241 catctgttct gccgtccagc cggaggtgtt cataatatcg ataagcaacg cggcggtgat
      301 ataacagtca tacaacgcgc ggtgatgatg caggcccggc ggcgtctgta cattgagctt
      361 ccgtgtttta tataacgcca tattgctgta cttgatccct ggccacaaac gacgggccag
      421 tttcatagtg caaatccact caccgggcat ctcaggcagt acgcggcggt caaagctggc
      481 gttgtgcgcg acataccatt cactaccgta atagtgtggg atcacatctt caatccacgg
      541 tttatcggcg accatggctt cggtgatgcg atgaatcgcc atcgcttgtg gactaatagg
      601 acgatcgggg cgcaccaggt ggctcatggg gttgacgatt tttccgtcaa tgacatcaac
      661 agaggcaatc tcaacgatcc ctccctgcaa accgcaggtt tctgtatcga taatgcgcaa
      721 catggcatgc tccaggccga aaaagcctag cgtaatggaa tgatatcgcc ttgccaaccc
      781 tgtgatgaac gctgaccgac taacaataat gaaccacgat cggcgcgaac gatgagacga
      841 ccatattcat cccatagtgc actgttacca cgggcatttg ccatcagcac ggcaatcgag
      901 tactgatgtg aaaaaaattg taagcgacgg gccgacgcca gcaggtcggg ttctcccaga
      961 cattgccctg tagtaaacag tgaacaggtc gggtccatat ccataccttg cggttgttca
     1021 tcgaccaccg tgatggttct ggaacgacgg cccagacatg caccatgact ctgatggtag
     1081 atcccaggcg tttttcgcca cggtgcgaac accgcaattc cacgaataaa gcgatcgtta
     1141 tattcaacgg gaaggccggc aatgatggtc attcgccagg tcgttgcggc ataacaaagc
     1201 gggtctaaca gtgagagatc gggtggggca ggaagggcac gtcgcgaata atcacacgcc
     1261 agtaaagaaa gcgatggaaa aactaacagc tgacattgtt gcctggcggc ggccctcaca
     1321 aactccagat gatgagctac ctgttcggtg agtgaggttt tacgaggctc atattgcgct
     1381 gctgcaactt tccagaacga cataatgact tccttttcaa aatgactgca aattatgggt
     1441 gcggtttaga aaatactcat aatttagcag gcgttatgta agaaagtgta actctgtata
     1501 agttttattt aagtttgggc tcgtaaggta aacgtgacag tttgaccgaa gccaaacggt
     1561 gggcaataag cctctcgcga aaccagctgc gcaaatgttc aggctgttca cgttcaaccg
     1621 cttcagcgat caccggcata ttgtagcgtt ctttaaatgc caccccggcc gccgccaaat
     1681 cgacattcac tttatccatt tctgtttgat ccagtttagc cagattcttc agcattctta
     1741 atctcctcat cattcgcggg caaaagttac taagagtgag ccaggatggc aagccggaat
     1801 tgatgatcct cgactcagac attagacaag gttatgctct gtaaaaaagt tattacaaaa
     1861 agtaatagat aatatggctt caactgcacg ctcccttcgc tacgcgctgg caatcctgac
     1921 cacttcgttg gtgacacctt ccgtctgggc acatgcgcat ttaacgcatc agtatcctgc
     1981 ggcaaacgcg caagtgacag ctgcaccgca ggcaatcact ttaaacttct cggaaggtgt
     2041 tgaaacagga ttcagtggtg caaaaatcac ggggccaaaa aacgaaaata ttaaaacatt
     2101 accggcgaag cgaaatgagc aggaccaaaa gcaactgatt gttccactgg ccgattcgct
     2161 gaaacccgga acctacaccg ttgactggca tgttgtttcg gtggacgggc ataaaacgaa
     2221 aggacactac acctttagcg tgaaataaat catgctggcg tttacctgga tcgcgctgcg
     2281 atttatccat ttcacctcgc tgatgctggt ttttggcttc gcaatgtacg gtgcctggct
     2341 ggcccccttg acgattcgtc gcttgctggc gaagcgtttt ctgcgtttac aacagcacgc
     2401 tgccgtctgg agtttgatca gtgccactgc aatgctcgcc gttcagggcg ggttgatggg
     2461 aacgggatgg acagatgtat tttcgccaaa catttggcag gctgttttgc aaacgcagtt
     2521 tggtggcgtc tggttatggc aaattgttct cgccctcgta acgttgcgcc cttatgcaac
     2581 cgcggaatat gccacgtttg ctgtttatgc tcactaccgc gcaatttatt ctgctggcgg
     2641 gagtggggca tgcgacgctg aatgaagggg taacggcgaa aatccatcag actaatcaca
     2701 cgattcacct gatttgtgcg gcggcgtggt ttgggggatt actgccggtg ctctggtgta
     2761 tgcaactcat caaaggccgt tggcgacacc aggctattca ggcgctgatg cgtttttcat
     2821 ggtgcgggca ttttgcggtg atcggcgtac tggcaagcgg ggtgcttagt gcattgttga
     2881 ttaccggatt tccccccacg cttacgactt actggggcca actcttattg ctcaaagcca
     2941 tcctggtgat gattatggtg gtcattgcgc tggctaatcg ttatgttctt gtaccgcgca
     3001 tgaggcagga tgaagatcgt gcggcaccct ggtttgtgtg gatgactaaa ctcgaatggg
     3061 cgataggtgc ggtagtgctg gtgatcatca gcctgcttgc gactctcgaa cctttttgat
     3121 ggattacgaa aatgatgaaa aaaagtattc tggcgtttct gttactcacc agttctgcag
     3181 cggcgctggc tgcaccgcag gtgattaccg tcagtcgttt tgaagtgggt aaagacaaat
     3241 gggcgtttaa tcgcgaagag gtgatgctga cttgccgacc gggtaatgct ttgtatgtta
     3301 ttaatccgag taccctcgtg cagtatcctt taaacgatat cgcacaaaag gaagttgcca
     3361 gtgggaagac caatgcccaa cccatttcgg tgattcagat tgatgatcct aacaatcccg
     3421 gcgaaaaaat gagtctggca ccgtttatag aacgagctga aaaactctgt taattaccta
     3481 aaatagcctt ttgatttcca ataaaaaaac cgcctcagtt ctttcaccag aacgggcggt
     3541 tttaacattt cagctgatga ccaccacgct ttttattgac cattttgcac gcaaactgga
     3601 aaacctggcg tcgtcatcta ttcttaaagg gcaaggcaac taagcctgca ttaatgccaa
     3661 cttttagcgc acggctctct cccaagagcc atttccctgg accgaataca ggaatcgtat
     3721 tcggtctttt tttaattgca tttaaaatca attagttgca aatgtctccc cgaaatttac
     3781 tcgaatttct gtattccggt cttttttggt tatatcacaa ccaaaataca tttaacaatc
     3841 catttacgtt aaaatcagag cagtaagtac gttttttctc tctcatcaag atacattttt
     3901 gttgtcttct ccgatgtgtg gccaagtaga cgctgagcaa attcttctcc acatgtttct
     3961 ttgtacaatc gtccagccag gcttctgact tcgtgaaaag ttggtgggtt ttcactgaac
     4021 tggatacctg ttaattttct ggctgcgaca aatttctttg tcaggccgtc cgggtgaatg
     4081 ctgccgtcag ggctgttttt tctaatcccg gcactgatta gataatcccc cctacttacc
     4141 atgcggcact gttcaactac tgcaccaagt cgtaaaccag cgacaggaag gctgagtgac
     4201 agggggatag caatcatcat tcctgtctta atttgcctga tgtggagacg atcatcataa
     4261 atatcactga accgcatatt cgttatgtct tcgcgacgtt gtcctgttac aagggctaaa
     4321 tccatagcta atgggaacca tgccggaagt tgatctgctg cctccctgat gcagttgt
//
LOCUS       DAJVUK010000229         4319 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.231, whole genome shotgun sequence.
ACCESSION   DAJVUK010000229 DAJVUK010000000
VERSION     DAJVUK010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4319
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.231"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..975)
                     /locus_tag="OQQ57_004028"
     CDS             complement(<1..975)
                     /locus_tag="OQQ57_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HCS1958583.1"
                     /translation="MIRKSATGVIVALAVIWGGGIWYTGTQIQPGVEKFIKDFNDAKK
                     KGEHAYDMTLSYKNFDKGFFNSHFQMQISFDNGAPDLNIKPGQKVAFDVDVEHGPLPI
                     TMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
                     AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLTRLE
                     EKKFPVGESESKFNQVNIINQGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLT
                     KGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEV"
     gene            complement(1130..1756)
                     /gene="dsbA"
                     /locus_tag="OQQ57_004029"
     CDS             complement(1130..1756)
                     /gene="dsbA"
                     /locus_tag="OQQ57_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HCS1958584.1"
                     /translation="MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            complement(1773..2759)
                     /gene="srkA"
                     /locus_tag="OQQ57_004030"
     CDS             complement(1773..2759)
                     /gene="srkA"
                     /locus_tag="OQQ57_004030"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HCS1958585.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRIVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLIPSGLKAAFLKATDELIAAVTAHWREDSTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            complement(2836..3105)
                     /locus_tag="OQQ57_004031"
     CDS             complement(2836..3105)
                     /locus_tag="OQQ57_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HCS1958586.1"
                     /translation="MKCKRLNEVIEFLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            3175..3759
                     /gene="mobA"
                     /locus_tag="OQQ57_004032"
     CDS             3175..3759
                     /gene="mobA"
                     /locus_tag="OQQ57_004032"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HCS1958587.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR"
     gene            3741..4268
                     /gene="mobB"
                     /locus_tag="OQQ57_004033"
     CDS             3741..4268
                     /gene="mobB"
                     /locus_tag="OQQ57_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HCS1958588.1"
                     /translation="MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHT
                     HHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL
                     DLILVEGFKHEEIAKIVLFRDGARHRPEELVIDRHVIAVASDVPLNLDVALLDINDVE
                     GLADFVVEWMQKQNG"
BASE COUNT         1169 a         1020 c          966 g         1164 t
ORIGIN      
        1 aacttcatcg tttgctaact cagggtgtgc agcaagctgc ttctgcatcg caatgttata
       61 ctggatgata aattggcgca ctgctgaggg atcaatagat tcagcaatca atgaccactc
      121 accactaccg agttgctgat tcccttttgt taacttatca agttcgtagg tcagattgac
      181 attgatataa tctttgtctt taacgcgatc cagcctggtt tttgcaacga aagcatcgat
      241 ttgggcaacg tcttccccct gattgataat attaacctga ttaaatttcg actcgctttc
      301 accaaccgga aatttctttt cttctaatcg tgtcagagaa tcaatggtaa aactttttgc
      361 cgttactttg ttcattggtg ataattgcag aacaatatct tcgactttgc cttcaatatc
      421 caggttagac aatgaactac catcaccatt aaaagtaaac tggccctcac caaaagaaaa
      481 ctttccatac tctgcagggg caacatctaa tgtcgtagag aatgagccac caaacgcgaa
      541 tcgcaatgtc gcttccacgg gcgatttatt tttcgcggcg ataaatagcg gttgtgtcag
      601 ttcattattc actaagttca cttttgccgc tgccagtgct gggatgacat taccatgcat
      661 taacattgtg atgggcaacg gaccgtgctc aacatccaca tcaaatgcaa ctttctggcc
      721 tggcttgata ttgagatcgg gtgcaccgtt atcaaatgaa atttgcattt gaaaatggga
      781 attaaaaaag cctttgtcaa agtttttata acttaacgtc atatcgtagg catgttcacc
      841 tttcttttta gcatcgttaa aatctttaat aaatttttcg acaccaggct gaatttgcgt
      901 acctgtgtac catatgccac caccccagat tacggctaac gcaacaataa cacctgtagc
      961 tgacttacgt atcatataaa tattccctga taaaacagca aaactttgaa tatccactta
     1021 tgctgaaata atgtccagcg gcaggatgta ttatcagaat gtatttatat ttattaaata
     1081 ataaaaaaag cccgtgaata ttcacgggct ttatgtaatt tacattgaat tattttttct
     1141 cggacagata tttcactgta tcagcatact gctgaacaaa aacatccata ttgctggtat
     1201 ccataccctg cggattcagc tgatatttac cgttaacaaa catcgccgga acaccgcgca
     1261 attgcacgtc agctgcagct ttttcctgct gagctaccag agatttcacc acgaagctgt
     1321 tccacgccgc gtcgtactct tcacctttaa tacctgcgtt gataaataca tcgcggatat
     1381 cagaagcaga acgaatggtc tgggttttct gtacgccttc aaacagcgga acagtcactt
     1441 tgtcttccac gcccagcgcc atcgccacag cccatgcctg agtcagatct ttgcccaggt
     1501 caccacccat gaagttgacg tggtatttag tcatcttcac gccttccggc agttttttct
     1561 tcacattatc agaaatatgc agaacttctt caaactgata gcagtgcgga cagaagaaag
     1621 agaaaaactc cagcacttgc ggcgcgccag ctaccggttt ttccagggta gtgtactgtt
     1681 taccatcttc atactgcgcc gccgatgcgc taaacgctaa aactaaacca gccagcgcca
     1741 gccaaatctt tttcatgatc tactctctcc gattaataca taggtgttaa ttgtaaaggg
     1801 ggttcttgta gaacttttgc ctgttctata aaagtcgccg tttgtcgcag ccagtaatct
     1861 tccccggtta accacgggaa atttttcggg aacgcgggat cagcccaacg ccgcattagc
     1921 caggcaagat aataaaccaa acgcatggcg cgtaaaggtt caatcagtcc gatttcagcg
     1981 gtgtcgaact cgctaaattc ttcataagct tcaataatag tttccagttg catccgctgc
     2041 tcggctttat cgccattgag caacatccac aaatcctgaa tagctggacc attacgtgca
     2101 tcatccagat caacaaacat tggaccatcg cgccagagaa tattcccggc gtggcagtct
     2161 ccatgtaagc gcagaacggt ggaatcttcc cgccagtgcg ctgtaacggc ggcgatcagc
     2221 tcatctgtcg ctttcaggaa tgccgctttc aacccggaag gtatcagtgt agcgtcctca
     2281 aacagcttgc gtggctcaat gagatattca ttcagaccga tggtcgggcg atggataaaa
     2341 agctgtttgc gccccgtctg gtgcatacgc cctaaataac gcccaaccgc ttccatctga
     2401 tcgatattat cagcttcgaa ctggcgacca ccgacgcttg gaaaaacagc gaaataaaat
     2461 ccctgatgat tcaataaagt ctgaccgtta aaggccacag gtgctgcgac cggaacttca
     2521 tcatttacca actgcaacgc aaattgatgt tcttcgagga tttgatcggc tgtccaacgt
     2581 tcagggcgat aaaatttgac gacaatacgt cgacgatctt cgtcctgaaa ttgatagaca
     2641 cggttttcat agctgttaag cggggtaaga ccggaatcca cccggatccc ttgctcaaat
     2701 agagcatcca tgatggtatc cgggtgtagt gtctggaaag taaaagcgct gttgttcatc
     2761 ccatcatccg gaaaacatta cgaatgatga aggatatcat ttcacgatga ttttggtggc
     2821 gccgcttaca agcttttact ctttaattac gccgcgagcg cgtaacagcg ccgttttgaa
     2881 gtcttcttca taatctttct gcaaacccgg gatcaccgca tctttcgcgg aatcacgcat
     2941 tttcaggtga tagatcagaa tgtcatccgt caaatccgcc agttcgccgt caaaacctga
     3001 ctctttcgcc agtttctgca aaaattgcaa caggttaagg tctggctctt tttgccaggc
     3061 tggctggagg aattcaataa cttcattcag acgtttacat ttcatagtga tgctccttac
     3121 tcttgagaca gacacgttag cagggtcaat cccacaataa aagaggcgat atcggtgaat
     3181 ctgatgacga cgataacagg cgttgtgctg gcaggcggta aagccagacg aatgggtggc
     3241 gtagataaag gattgcttga attaaacggc aaaccattat ggcaacatgt cgctgacgcg
     3301 cttatgacgc agctctctca cgtcgtggtt aatgccaatc gtcatcagga aatctatcag
     3361 gcaagcggtc tgaaagtgat tgaagattca ctggcggatt acccaggccc tctggcagga
     3421 atgctttcag taatgcagca ggaagctggt gagtggtttt tgttttgccc gtgcgatacg
     3481 ccttacattc cccctgattt agcagcccgg cttaatcatc agcgcaaaga tgcgcctgtc
     3541 gtgtgggtcc atgacggtga acgcgatcac ccgactattg ctctggtaaa ccgcgctatt
     3601 gagcctttat tactggaata tctgcaagca ggagaacgcc gggtaatggc atttatgcgt
     3661 ctggctggcg gtcatgcggt tgatttcagc gatcataaag atgcatttgt taacgtgaat
     3721 acgccagagg agcttgcccg atggcaggaa aaacgatgat accgttactc gcctttgccg
     3781 cgtggagtgg taccggaaaa actacgcttt tgaaaaaact gatcccggca ttatgcgcca
     3841 gagggatccg tccagggctg attaagcata cgcaccatga tatggatgtt gataagccag
     3901 gcaaagatag ctatgagctg cgcaaggctg gcgcggcaca aaccatcgtt gccagccagc
     3961 aacgatgggc cttgatgacg gaaacaccag acgaagaaga gctggatcta cagtttctcg
     4021 caagtcgaat ggatacctca aagctggatt tgattctggt cgaagggttt aagcatgaag
     4081 agatcgcaaa gattgtgctg tttcgcgatg gagccagaca tcgacctgaa gaattagtga
     4141 tagacaggca tgttattgct gtagccagtg atgtgccgct taatcttgat gtcgcattac
     4201 tggatattaa tgatgttgag gggctggctg attttgtggt ggagtggatg caaaagcaga
     4261 acggataagc aagagtaggc tggatcagac gcagccagtg tcgcatccga cctttttct
//
LOCUS       DAJVUK010000230         4302 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.232, whole genome shotgun sequence.
ACCESSION   DAJVUK010000230 DAJVUK010000000
VERSION     DAJVUK010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4302
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.232"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..466
                     /locus_tag="OQQ57_004034"
     CDS             <1..466
                     /locus_tag="OQQ57_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014837283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958589.1"
                     /translation="LPISAADKRRFYYYFQEKNTPNIERFFVFDSSEYRYALNMREVV
                     FHQFLSDGLRPIVDEDDDAYEDDYFNVHITLVNGGPVIPLSVEPDAPQNEETDDIGQL
                     NAFFDALDCEPETTDRFMITDEDGEDAFIRIGSIAMVRVALDVLEPVEDDDE"
     gene            713..1978
                     /locus_tag="OQQ57_004035"
     CDS             713..1978
                     /locus_tag="OQQ57_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001642584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1958590.1"
                     /translation="MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRY
                     EGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKKKNDKVEQSKARTFKEVA
                     IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEV
                     AARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDS
                     YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGS
                     KMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDT
                     KVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLML
                     QWWADFLDVNRERFISPFEYAKINNPLKQ"
     gene            complement(2295..2818)
                     /locus_tag="OQQ57_004036"
                     /pseudo
     CDS             complement(2295..2818)
                     /locus_tag="OQQ57_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001535067.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
     gene            3405..3634
                     /locus_tag="OQQ57_004037"
                     /pseudo
     CDS             3405..3634
                     /locus_tag="OQQ57_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
BASE COUNT         1147 a          948 c         1048 g         1159 t
ORIGIN      
        1 gttgcccatt tcagcagcgg ataagcggag gttttattat tattttcagg aaaaaaacac
       61 cccaaacata gaacgcttct tcgtttttga ttcttccgag tatcgttatg cgttaaatat
      121 gcgtgaagtg gtatttcatc agttcctttc tgatggtctg cggccaatcg ttgacgaaga
      181 cgatgatgcc tacgaagacg attattttaa tgtccatatc acgctggtaa acggcggacc
      241 agtgattcca ctgagtgttg agccagatgc gccgcaaaac gaagagacgg atgatatcgg
      301 ccagttgaat gcattttttg acgcgctgga ttgcgagcct gaaaccacgg atcgttttat
      361 gataaccgac gaagatggag aagatgcttt cattcgtatt ggttctatcg ctatggtgcg
      421 agttgcgctt gatgtgctgg aaccagtgga agacgatgat gagtagtatt gaatggattg
      481 atttcatatt gttgagtctg gaatcgcggt gcggccttcg gcaccaaaag tatgtaaata
      541 gacctcaact gaggtctttt tttatgcctg aaatccagtg tttatctatc tttcccgcta
      601 tattaactct ctcaaggtca accgatatca acgtacatct accaacatat gttggtacag
      661 atgatggtat ttccggttcg ataatgcttg taccaacagg gagggaatac gcatggcatt
      721 aacagatatc aaagtcagag cagccaagcc aacggataag caatataagc tgactgatgg
      781 tggcggtatg catctgcttg tccatccaaa tggttctaag tactggcgtt tgcagtaccg
      841 ttatgaggga aagcaaaaaa tgctggcact tggggtttat cctgaaatca cactagcgga
      901 tgccagagta cgtcgtgacg aggcgcgtaa cctgcttgcg aatggcgtcg atccgggaga
      961 caaaaagaaa aatgataagg ttgaacagag taaagcacga acctttaaag aagtcgcgat
     1021 tgagtggcat ggcaccaata aaaagtggtc tgaagatcac gcccatcgtg tgctaaaaag
     1081 tcttgaagat aatctttttg cagcgcttgg tgaacgtaat atcgctgagt taaaaactcg
     1141 agatttatta gcacctatta aggccgtaga aatgtctgga cgtcttgaag tggccgctcg
     1201 tcttcagcag cgcactacag ccatcatgcg ctatgcagtg caaagtgggt taattgatta
     1261 taacccggca caagagatgg ctggggcggt tgcttcctgt aatcgacaac atcgtcccgc
     1321 gcttgaatta aagcgcatcc ctgagttgct tacaaaaata gatagctata ctggtaggcc
     1381 gctaacccga tgggcgatag aactcacttt gctgatcttt attcggtcca gtgagctgcg
     1441 ttttgctcgt tggtcagaga tcgatttcga agcgtctata tggactatcc caccggagcg
     1501 ggagcctatt cctggagtga aacattccca tagaggctca aaaatgcgta caactcatct
     1561 agtgcctctt tcaacgcaag ctcttgcaat tttaaagcag ataaaacagt tttatggggc
     1621 ccatgacttg atatttattg gtgatcacga ttcgcacaaa cccatgagtg agaatacggt
     1681 aaatagtgcg ttacgggtca tggggtatga tacaaaagta gaggtttgtg gtcatggctt
     1741 tcgaacaatg gcctgtagtt cattggtcga atcaggtttg tggtctcgtg atgctgttga
     1801 acgtcagatg agccacatgg agcgaaattc agtgagggcc gcgtatatcc ataaagcaga
     1861 gcatctggaa gaacggcgat tgatgctaca gtggtgggcc gattttctgg atgtaaacag
     1921 agaaagattt atcagtccat ttgaatatgc aaagattaat aatccattaa aacagtaatc
     1981 atcccgggca aatgcccggg aattattcta ggattatttt ctttgttaaa aaagacaaac
     2041 ggtattaact gatgtattta ctatttaccg ctccctgcag gggggattat cagaatccgc
     2101 ggttattcat tatttatata ctttcaataa aaaagtaacc tcataaaaaa tcctgtactc
     2161 acagggtgat gcgggataac tgacgtaagg agtgctgcag ggatttgatg gtcccttgtg
     2221 ctgatatgaa tacggatatt ttatacagaa tacttttcag tacaagcgac tgtattacag
     2281 tctgccatat atgattacct gtgatcagga agaataagtg gctgaggttt caaactgtct
     2341 gccggtatat tcctctctcc cttaaaaacc ataacagttt aattatcttc gtctgtcagc
     2401 ggattgaatg gcggtatatt ttcagtacaa ataccggtca tccactgaaa aatacctgcg
     2461 aaatgacggg cactgatttt tctactgacg ggctgatgag acgttatgtc actgacatat
     2521 aatccctgcg cacactctca ccagtgacaa taacaatcgt atcatataac ggtgctcccg
     2581 gctggatttt ccagttgtca gccccgtgct gactcagttg ttcataacgc tgcatttcac
     2641 gtaatgtgtc agttgtcccc acaactgttc ctttaaccat ccgcaatggc caacggttta
     2701 cagagcataa tacgaatagc cgtagagcca gccagttacg gtggtcgcga tggtgtgtcc
     2761 gccagaaaat caccacgaat accagaatcg cggcactgac cagaaaatga taaacaggaa
     2821 acacggggcg gttcactttg ctttctcctg tagtgttttc tgtaggttct gaaccggttc
     2881 gagcggggtt gtgaggctga tggcaatccc cgggctcttc ctgcatgtta cactggtact
     2941 gcaagagggg gccttcgctc ctctgacatt actcagtatt ttcactacta caccccatct
     3001 gccatccata acaaccgatt caccccctcg cgaggcgttg ttgcccgtca cccggacaga
     3061 catcgttatg gatttctctt gttgcacgat cgatcaattg ttatgcatgc tgacaccaca
     3121 accccggtgg gtatgaccga tgcctttctc actcttttcc cggtcatcgt cggccttccc
     3181 cgttattgtg gagtgtcagc accctcgacg gcatttcgat ggctgctcag tgttcactca
     3241 cgttacggcc cgcataaccc gttgacttcc tgaagaagtc gtttcaggga gagattcagc
     3301 ccttttgtta cctcctggac cgcttcttgt ccttccagtc ggagcgagag ttagccgggg
     3361 cggactttca ccgacggaaa gatcgtgcat ttcaaggcac acacaacaat atctgcgagc
     3421 gtgctatccg tccggtcgtt atgggacgaa aggcctggtt gttcgctggt tcactgatgg
     3481 ccgggaaccg cgcggcacag ataatgagcc ttctgggaac cgcagtctgg agccacatgc
     3541 ttggctgacg gacgtcctga cgcgtctgcc ggagtggccg gaggagaggt tggctgagtt
     3601 actgcctctt gagggcttta ccttcttcgg gtaagtgata cctgccgtca ggtgtttgtg
     3661 caccgggcca taacctgcag ttgggaattg aacgcctgac aacaggaaat gagctagagc
     3721 agtaaacacg cgggctgaca atgggtcaga atatgagtca gcccggcgtt attcctgggg
     3781 tcagtacttc agatccagcc tccggtacca gactagctag cccctacgca accaaataaa
     3841 tcaaccatcg tcagagtgca atcgttcata tacactgtcg gtgatgcgct gaaaaatgcg
     3901 ttaatgttga gttcctcgaa cccttaccaa ttaagggaca tagccagata cgcaactggc
     3961 tgatgcaagc agtctaatgt ctttagatcc gctggcctgc gggcatgaca atgtcaaaca
     4021 gtcaaagatt gtggcgttga cggtcagtct tggggacaaa aaagctcagt attctcgttg
     4081 gcagccagat aatttaacag ttgatgctga aacgaaatag gcatcttggt tctggtgttt
     4141 gtaacaaact atcagctaca aaaatatgct caatttgtga catcagtaac aaaacgcgtt
     4201 ttgttatgtg gattgcttgt tttttgatct ggtataacag gtataaaggt atacagaaaa
     4261 gcaaagaaat actgcaaagg aaaacagcta taacgtaagc ta
//
LOCUS       DAJVUK010000231         4294 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.233, whole genome shotgun sequence.
ACCESSION   DAJVUK010000231 DAJVUK010000000
VERSION     DAJVUK010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.233"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            47..2209
                     /gene="ybiO"
                     /locus_tag="OQQ57_004038"
     CDS             47..2209
                     /gene="ybiO"
                     /locus_tag="OQQ57_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001267224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HCS1958591.1"
                     /translation="MQWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ
                     KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV
                     SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL
                     PLYRKMGLWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT
                     IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIHDETARYWSRRLSWLSSLIG
                     YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
                     FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG
                     MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD
                     FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT
                     LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
                     FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
                     GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL
                     RVSFTTLPLKQWTVRFALDSQVKKHFDLVGVRAPVQTY"
     gene            complement(2269..3195)
                     /gene="rlmF"
                     /locus_tag="OQQ57_004039"
     CDS             complement(2269..3195)
                     /gene="rlmF"
                     /locus_tag="OQQ57_004039"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HCS1958592.1"
                     /translation="MSAQKLGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            3471..3730
                     /locus_tag="OQQ57_004040"
                     /pseudo
     CDS             3471..3730
                     /locus_tag="OQQ57_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
     gene            3995..>4294
                     /locus_tag="OQQ57_004041"
     CDS             3995..>4294
                     /locus_tag="OQQ57_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HCS1958593.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPG"
BASE COUNT         1000 a         1128 c         1074 g         1092 t
ORIGIN      
        1 agcatctata cttatctttt tgctctgttt tctcactgga ggagtcatgc agtggatcct
       61 gttcatcctc ttctgcctgc tgggcgcacc tgcccacgcg gtatccatac ccggcgttac
      121 aaccacaacg acaacggact caacgactga accggccccg gaaccggata tcgaacaaaa
      181 aaaagcggcc tatggcgcac tggcggatgt gctggataac gacacctcgc gtaaagaatt
      241 gatcgaccag ttgcgtactg tcgccgcgac gccccctgcg gaaccggtcc cgaagatcgt
      301 gccgccgacg ctggttgaag agcaaaccgt gctgcaaaag gtcaccgaag tcagccgcca
      361 ttatggtgaa gccctttccg cccgcttcgg gcaactttat cgcaatatta ccggctcccc
      421 gcataagccg tttaatccac aaacattcag caatgcgctg acccattttt caatgttagc
      481 ggtattagtg tttggttttt actggctgat tcgcctgtgc gcactgccgc tgtatcgcaa
      541 aatgggcctg tgggcgcggc aaaaaaatcg tgagcgcagt aactggttgc agcttccggc
      601 gatgattatc ggggcgttta ttatcgacct actgttactg gcactgacat tatttgtcgg
      661 ccaggtatta agcgacaacc tgaatgcagg cagtcgcacc atcgctttcc aacaaagttt
      721 gtttctcaac gcctttgccc tgattgaatt tttcaaagct gtactacgcc tgattttttg
      781 cccaaacgtg gctgaactgc gcccgttcac gattcatgac gagaccgccc gttactggag
      841 tcgtcgcctg agctggttaa gcagtttgat aggttatggc ctgattgtgg ccgtgccgat
      901 tatctctaat caggtgaatg tacagatagg tgcgctggcg aacgtcatca ttatgctgtg
      961 catgaccgtc tgggcgttgt acctgatctt tcgcaataaa aaagagatta cccaacattt
     1021 gctcaacttt gcggagcatt cgctggcctt tttcagcctg tttatccgcg cctttgcgct
     1081 ggtgtggcac tggctggcaa gcgcctattt tatcgtgctg tttttctttt cgttgttcga
     1141 tccgggcaac agcctgaaat ttatgatggg tgcaacggtg cgcagcctgg cgattattgg
     1201 tatcgcagcg tttgtttccg gtatgttttc ccgctggctg gcgaaaacca tcaccctctc
     1261 gccacatact cagcgtaact atccggagtt gcaaaaacgg ctgaatggct ggctttcggc
     1321 ggcgctgaaa acggcgcgta ttctgaccgt ctgcgtggcg gtaatgttgc tgttgagcgc
     1381 atggggattg ttcgatttct ggaactggct gcaaaacggc gcggggcaga aaaccgtaga
     1441 tatcctgatc cgtatcgcac ttattctttt tttctcggcg gttggctgga cggtgctcgc
     1501 cagtttgatc gaaaaccggc tggcttcgga tattcatggc cgcccgctac ccagcgcccg
     1561 tacgcgtacc ctgctgacgc tgtttcgtaa cgcgctggcg gtgattatca gtaccatcac
     1621 catcatgatt gtgttgtcgg aaatcggcgt caatatcgcg ccattgctgg caggtgccgg
     1681 ggcattaggt ctggctatct cgtttggttc gcaaacgctg gtgaaagata tcattaccgg
     1741 ggtgtttatt cagtttgaaa acggcatgaa cactggagat ttggtgacta tcgggccgtt
     1801 gaccggcaca gtggaacgga tgtcgattcg ctccgtgggc gtgcgccagg ataccggggc
     1861 gtatcacatc attccgtggt cttcgataac cacctttgct aacttcgtcc gcggtattgg
     1921 ttcggtagtg gcaaactacg atgttgatcg ccatgaagat gctgataaag ccaatcaggc
     1981 actgaaagat gcggtagcgg aattgatgga aaacgaagaa attcgcgggc tgattattgg
     2041 tgaaccgaat tttgccggga ttgtcggctt aagcaatacc gcgtttacac tgcgtgtttc
     2101 gttcaccacg ctgccactca aacagtggac ggtacgcttt gccctcgaca gccaggtgaa
     2161 aaaacatttc gacctggtgg gcgttcgcgc gccagtgcag acttattagg tgctgcctac
     2221 tccgggcgcg accccggctg aaccgttacc gccgggggag ccaacgcttt aacgctggcg
     2281 attgacaaaa cggcggcgct gctcgtcgtt cataaaggtc caggcaataa agcgactctg
     2341 cttttgcccc tgggccatct ctttttttac caccttcacc gcgcccacgt cggtcagagc
     2401 acgatacaac ggcggtaagt tttcaccacg agataccagc gaggtaaacc acatcacctg
     2461 cttcgcgaag cctttgctct cttcaatcat ctttttgata aaggcgactt caccaccttc
     2521 acaccacaac tcctgttgct gaccaccaaa gttcagtgca tcgtctttgt tcagccccag
     2581 gttacggcgt ttacgctcac tacctgcccg cgctgcagcg gcggaatcgt ggaatggcgg
     2641 gttacacaag gtcgcgtcgt attgctcgtt tttatggatg atgccgttaa aaattgcccc
     2701 actctctttt tgccgacgca gacgaatggc gcggttaagc cccggattag cactgataat
     2761 cgcctgcgca ctgcttaacg cctggctgct ggtttcacta ccggtaaaac gccagccata
     2821 ttcatgtacg ccaatcagcg gataaataca gttcgcacca acgccgatat ccagaatgct
     2881 ggcattcgct ggaattgttc cgcttgcttc agccagtaaa tcggcaaggt gatgaatata
     2941 atccgcccgg ccgggtactg gtgggcagag aaaaccgtcg gggatatccc agttcgctac
     3001 ggcgtaaaaa tgggccagca acgccttatt gagcgccttc accgccagcg gattggcaaa
     3061 gtctacgctt tgctccccgg cgggtgtaag cgtgaggaat tgcctgagtt caggattgac
     3121 ctgacaaagc gtggcgagat cgtagcggct gtgatgacgg ttgcgcggat gcaaccccag
     3181 tttctgggcg gacatagcat tctcctttaa gcagcggcgt aagatacccg cataacgcga
     3241 cagggtaaat atctggctgc gtttatcatt ccccaaaacc ttaacatggc tatggtttat
     3301 ggcaattcat cataaaaatc agcattatgc atgtcattga tttgtcttat tttgtaaaaa
     3361 tatatcgttc aaaaaataag cacatctctg tcaatttttt gcgtcatttg catcgcgcag
     3421 gcgacctaca cttatcaggc actacccgtt gtatttatga ggatgtcatt atgaaaaagt
     3481 gcctcacact actgattgcc accgtcctga gcagaatctc tctcacggct tatgccgcgc
     3541 aaccgatgag taacctggac agcggtcagc tacggcccgc ggtaccgttt cggcaactgg
     3601 cgcatcaaac ctaagcgatc tggaggataa actggcagaa aaagcgcgcg aacaaggcgc
     3661 gaaaggttat gtcattaatt ccgcaggcgg aaatgaccag atgttcggta ctgcaaccat
     3721 ctacaaataa ccccaccaac gtaactgcat tcgcctctgg atgcagtttt cgcctgtttt
     3781 gtaatcaaaa aacatcaaat atgaactcaa tgtaaataaa tgtatttctt tttcgcgcaa
     3841 tgggtgatag aaaatcgcgc taagtgataa tgtttatcaa aattattatc acttgcatga
     3901 acactatcac gggattaaca gtggcatcgc atccgcagag atgctttctc gtgacagtga
     3961 aaatttcaac atataagaaa aagtcacctg caaaatggaa aacaatcgca atttccctgc
     4021 cagacaattt cattcgctca cgttctttgc cggtctttgt attggcatca cgcctgtggc
     4081 tcaggcactc gccgccgaag ggcaaactaa cgcggatgac acgctggttg tcgaagcatc
     4141 aacgccttcg ctttatgcgc cacaacaatc tgccgatccg aaattctcgc gtccggtagc
     4201 ggatactacc cgcacgatga cggtgatttc tgaacaagtg attaaagatc agggcgcaac
     4261 caaccttacc gacgcgctca aaaacgtccc cggc
//
LOCUS       DAJVUK010000232         4267 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.234, whole genome shotgun sequence.
ACCESSION   DAJVUK010000232 DAJVUK010000000
VERSION     DAJVUK010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.234"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..212)
                     /locus_tag="OQQ57_004042"
     CDS             complement(<1..212)
                     /locus_tag="OQQ57_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HCS1958594.1"
                     /translation="MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKF
                     RASGQPVFLVRVGWSADYAEALKQPV"
     gene            522..2294
                     /gene="aspS"
                     /locus_tag="OQQ57_004043"
     CDS             522..2294
                     /gene="aspS"
                     /locus_tag="OQQ57_004043"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HCS1958595.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            2412..2864
                     /gene="nudB"
                     /locus_tag="OQQ57_004044"
     CDS             2412..2864
                     /gene="nudB"
                     /locus_tag="OQQ57_004044"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HCS1958596.1"
                     /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDSQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            2893..3633
                     /locus_tag="OQQ57_004045"
     CDS             2893..3633
                     /locus_tag="OQQ57_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCS1958597.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVITFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEIAATL"
     gene            3668..4189
                     /gene="ruvC"
                     /locus_tag="OQQ57_004046"
     CDS             3668..4189
                     /gene="ruvC"
                     /locus_tag="OQQ57_004046"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HCS1958598.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
BASE COUNT         1053 a         1061 c         1199 g          954 t
ORIGIN      
        1 tcaaccggct gttttaatgc ttcggcgtaa tcggcagacc agccaactcg caccagaaac
       61 acgggctgac cgctggcgcg aaatttcgcc gccagcttcc cggcgcgatt aactacctca
      121 tcggcagtat gtggaccacc ggcaaaaggt aagatgcctt cttgtaaatc gatcaccacc
      181 aacgcagtgg ttttagcatt aagttcaagc atgctgactc ctgaaaaaac aaaatcgtgc
      241 ctcacacctt aatgcgatta gccgatggcg gaacgacaaa ttttgttaat ttttatgagt
      301 tcgggcaaca cctttatagc aaactggcgt agagtctgat ttcaggcccg atataaagtg
      361 gtaacgaggc gttccagcgc gggctaggct cttacggtgc ggcagaattt ccagtataat
      421 agccgccttt tttcattcag ttgtgacata cagctaacgc tgcgacttgg tcacctgcgc
      481 agcagggggc atccgccggc agctaagtta agggatatct catgcgtaca gaatattgtg
      541 gacagctccg tttgtcccac gtggggcagc aggtgactct gtgtggttgg gtcaaccgtc
      601 gtcgtgatct tggtagcctg atcttcatcg atatgcgcga ccgcgaaggt atcgtgcagg
      661 tatttttcga tccggatcgt gcggacgcgt taaagctggc ctctgaactg cgtaatgagt
      721 tctgcattca ggtcacgggc accgtacgtg cgcgtgacga aaaaaatatt aaccgcgata
      781 tggcgaccgg cgaaatcgaa gtgctggcgt cctcgctgac tatcatcaac cgcgcagatg
      841 ttctgccgct tgactctaac cacgtcaaca ccgaagaagc gcgtctgaaa taccgctacc
      901 tcgacctgcg tcgtccggaa atggctcagc gcctgaaaac ccgcgctaaa atcaccagcc
      961 tggtgcgccg ttttatggat gaccacggct tcctcgacat cgaaactccg atgctgacca
     1021 aagccacgcc ggaaggcgcg cgtgactacc tggtgccttc tcgtgtgcac aaaggtaaat
     1081 tctacgcact gccgcaatcc ccacagttgt tcaaacagct gctgatgatg tccggttttg
     1141 accgttacta tcagatcgtt aaatgcttcc gtgacgaaga cctgcgcgct gatcgtcagc
     1201 ctgagtttac tcagatcgat gtggaaactt ctttcatgac cgcgccgcaa gtgcgtgaag
     1261 tgatggaagc gctggtgcgt catttgtggc tggaagtgaa gggcgtggat ctgggcgatt
     1321 tcccggtaat gacctttgcg gaagcagaac gccgttatgg ttctgataaa ccggatctgc
     1381 gtaacccgat ggaactgacc gacgttgccg atctgctgaa atctgttgag tttgcagtat
     1441 ttgcggggcc ggcgaacgat ccgaaaggcc gtgttgccgc tctacgtgtt ccgggtggcg
     1501 catcgctgac ccgtaagcag atcgacgaat acggtaactt cgttaaaatc tacggcgcga
     1561 aaggtctggc ttacatcaaa gttaacgaac gcgcgaaagg tctggaaggt atcaacagcc
     1621 cggtagcgaa gttccttaat gcagaaatca tcgaagccat cctggatcgt actgccgcgc
     1681 aagatggcga tatgattttc ttcggtgccg acaacaagaa aattgttgcc gacgcgatgg
     1741 gcgcactgcg cctgaaagtg ggtaaagacc ttggtctgac cgacgaaagc aaatgggcac
     1801 cgctgtgggt tatcgacttc ccgatgtttg aagacgacgg tgaaggcggc ctgacggcaa
     1861 tgcaccatcc gttcacctca ccgaaagaca tgactgctgc agaactgaaa gctgcaccgg
     1921 aaaatgcggt ggcgaacgct tacgatatgg tcatcaatgg ttacgaagtg ggcggtggtt
     1981 cagtacgtat ccataatggt gatatgcagc agacggtgtt tggtattctg ggtatcaacg
     2041 aagaggaaca gcgcgagaaa ttcggcttcc tgctcgacgc cctgaaatac ggtactccgc
     2101 cgcacgcagg tctggcattc ggtcttgacc gtctgaccat gctgctgact ggcaccgaca
     2161 atatccgtga cgttatcgcc ttcccgaaaa ccacggcggc agcgtgtctg atgactgaag
     2221 caccgagctt tgctaacccg actgcactgg ctgagctgag cattcaggtt gtgaagaagg
     2281 cagagaataa ctgatatgac tcaaatacac gaaatcattc gcgttgcatc aaggcggcaa
     2341 ttgagtgaac tcccatgagc atagataact atgtgaatgg gatgagcgaa ggcagtcaac
     2401 gaagaggcag cgtgaaggat aaagtgtata agcgtcccgt ttcgatctta gtggtcatct
     2461 atgcacaaga tacgaaacgg gtgctgatgt tgcagcggcg tgacgatccc gatttctggc
     2521 agtcggtaac cggcagcgtg gaagagggtg aaaccgcgcc gcaagctgcc atgcgcgaag
     2581 taaaggaaga ggtcaccatt gatgttgtcg ctgaacaact gaccttaatt gacagtcagc
     2641 gcacggtaga gtttgaaatt ttttcacatt tacgtcatcg ctatgcgccg ggcgtgacgc
     2701 gtaatacgga atcatggttc tgtcttgcgc ttccgcacga gcggcagatc gttttcactg
     2761 aacatctggc ttacaagtgg cttgatgcgc ctgctgcggc ggcgctcact aagtcctgga
     2821 gcaaccggca ggcgattgaa cagtttgtaa ttaacgctgc ctgaacaggc agggctatct
     2881 ggagatattt ttatggcagg tcatagtaaa tgggccaaca ccagacatcg taaagctgcg
     2941 caggatgcta agcgcggtaa aatcttcact aaaatcattc gtgagctggt aaccgcggct
     3001 aagctgggcg gtggcgatcc ggacgctaac ccgcgtctgc gtgcggcggt ggataaagca
     3061 ctgtctaaca acatgacccg tgacacactg aaccgcgcaa ttgcacgtgg tgtgggcggt
     3121 gatgatgatg caaacatgga aaccatcatc tacgaaggtt acggtcctgg cggcacggca
     3181 atcatgattg aatgtctgtc tgacaaccgc aaccgtaccg ttgctgaagt gcgtcatgca
     3241 ttcagcaaat gtggcggtaa cctcggtaca gatggttccg tagcctatct gttcagcaaa
     3301 aaaggcgtga tcaccttcga gaaaggcgat gaagacacca tcatggaagc agctctggaa
     3361 gcaggtgctg aagacgttgt gacctatgat gacggcgcga ttgatgtcta cactgcatgg
     3421 gaagaaatgg gtaaagtgcg cgacgctctg gaagcggcag gtctgaaagc agacagcgcg
     3481 gaagtttcca tgatcccgtc caccaaagct gatatggatg cagaaaccgc accgaaactg
     3541 atgcgtctga tcgatatgct ggaagattgc gacgacgtgc aggaagttta ccataacggt
     3601 gaaatctctg atgagattgc agcgactctc tgatgaggcc tgctaaacag caaaacggag
     3661 acgcgtgatg gctattattc tcggcattga cccgggttcg cgcgtgaccg gctatggcgt
     3721 catccgccag gtaggcaggc aactgtccta cctgggtagc ggatgcatac gcaccaaggt
     3781 ggatgattta ccgtctcgtc tgaagctcat ctatgcgggc gtgacggaaa tcatcaccca
     3841 gttccagcca gattatttcg ccattgaaca agtctttatg gccaaaaatg ccgactcggc
     3901 tctgaaactg gggcaggcgc gcggcgtggc gattgtggcg gcggtgaatc aggaattgcc
     3961 ggtatttgaa tatgcggcac gtcaggtaaa gcaaacggtg gtaggtattg gtagtgccga
     4021 aaaaagtcag gtgcagcata tggtccgcac cttgctgaaa ctgcccgcta atccacaggc
     4081 ggatgccgcc gatgcgttag ctatcgcgat tacccattgt cacgtcagcc agaatgcaat
     4141 gcagatgagc gaatcgcggc tgaacctggc gagagggcga ctgcgttaag ttataccgcc
     4201 tcggtcagtt caggctgagg cgtttcaact ccctccgcgt gaatcaacac caaacccgga
     4261 tgatgcc
//
LOCUS       DAJVUK010000233         4206 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.235, whole genome shotgun sequence.
ACCESSION   DAJVUK010000233 DAJVUK010000000
VERSION     DAJVUK010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4206
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.235"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            115..618
                     /gene="yeaK"
                     /locus_tag="OQQ57_004047"
     CDS             115..618
                     /gene="yeaK"
                     /locus_tag="OQQ57_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HCS1958599.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     VNFRRTA"
     gene            complement(619..723)
                     /locus_tag="OQQ57_004048"
     CDS             complement(619..723)
                     /locus_tag="OQQ57_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958600.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            892..1338
                     /locus_tag="OQQ57_004049"
     CDS             892..1338
                     /locus_tag="OQQ57_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HCS1958601.1"
                     /translation="MVDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(1295..2116)
                     /gene="nimR"
                     /locus_tag="OQQ57_004050"
     CDS             complement(1295..2116)
                     /gene="nimR"
                     /locus_tag="OQQ57_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NimR"
                     /protein_id="HCS1958602.1"
                     /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI
                     LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC
                     CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI
                     RTMVEMMAKGPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG
                     LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ"
     gene            2213..3409
                     /gene="nimT"
                     /locus_tag="OQQ57_004051"
     CDS             2213..3409
                     /gene="nimT"
                     /locus_tag="OQQ57_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005117270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HCS1958603.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA
                     LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGSNSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     RSYPVL"
     gene            3449..3796
                     /locus_tag="OQQ57_004052"
     CDS             3449..3796
                     /locus_tag="OQQ57_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HCS1958604.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEI
                     TPSTELRKAFHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(3818..4072)
                     /gene="yoaF"
                     /locus_tag="OQQ57_004053"
     CDS             complement(3818..4072)
                     /gene="yoaF"
                     /locus_tag="OQQ57_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HCS1958605.1"
                     /translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
BASE COUNT          968 a         1065 c         1044 g         1129 t
ORIGIN      
        1 ttacatgatg cgtataaagc ttccgatgag cgtttatatg tcaataagca gaacaaaaac
       61 agccgttcat gataaccttc tgtggttgtt tgcttgtaat ctcaggagcg tgaaatgact
      121 gaaatggcta aaggaagcgt gacgcatcag cggttaatcg ctttattatc acaagaaggt
      181 gctaacttcc gcgtcgttac ccatgaagcg gtaggtaaat gtgaagcggt gtcagaaatt
      241 cgtggcaccg ctttaggcca gggagctaag gcactggtat gtaaagtcaa aggcaatggc
      301 gtaaatcaac atgttctggc gatcctcgct gccgatcaac aggccgatct gagccaactt
      361 gccagccata taggcggatt acgcgcttcg ttagccagcc ctgctgaagt cgatgaactc
      421 acaggctgtg tcttcggcgc gatcccccct ttcagcttcc atccaaaact caaactggtt
      481 gccgaccctc tactcttcga acgatttgat gaaatcgcct tcaatgcagg gatgctggat
      541 aaatccgtta ttttgaaaac cacggattat ttgcgcattg cgcaaccaga actggtcaat
      601 ttccgccgca ctgcgtaact agcctgtccg ttcaataagc agaacggaca aaaccagcac
      661 aacagcaatg gcaaaaaacg atgacgtgat aatcagtgtc tcgacgaaca tttgatcgtt
      721 catagcatgc ccccgggaga tagctgtttt cacgttattg ttagcgtgca caaatggcag
      781 tttgatgaca gttcgcctga tttttatgca aaaaacgtaa agattttcta cttccttcct
      841 gcagcaagcg taaagtaagc aggcttatta ttttttggca aggaaaccac gatggttgat
      901 gtcactttgc tgatcctgct cgggttagct gcgctgggct ttatcagtca taacaccact
      961 gtcgccgttt caattctggt gttgatcatt gtccgcgtca caccgttaag cacctttttc
     1021 ccgtggattg aaaaacaggg gctaagtatc gggataatca ttctgacgat tggcgttatg
     1081 gcccccatcg ccagcgggac gctaccgccc tcaaccttga ttcactcgtt tctgaactgg
     1141 aaatcgctgg tggcaattgc agtaggcgtg attgtctcct ggctgggtgg gcgcggcgtg
     1201 accttaatgg gcagccagcc gcaactggtc gccgggctgc tggtaggcac tgttttaggc
     1261 gtggcgctgt ttcgcggcgt accggtcggc ccgcttattg ccgcgggtct ggtttcgctg
     1321 attgtgggga aacagtagtt aatcccgcaa tatatcggcc tggcgtttgc cccaggcctt
     1381 tcttaaacat agtaataaag gccgttgttg aatcataccc cagcgtatga gcaactttct
     1441 gtacagtatc gcctttcact aatccctgaa gtgccataat cagctgtaac tgctgacgcc
     1501 actggcgaaa actcaacccc gtctctttta cgatcagtcg cgcaagattg cgttcactca
     1561 tcgcaaaaaa gccagcccat tgccctaatg acccccactc gacgggccct ttcgccatca
     1621 tctccaccat cgtgcggatt ttaggatgag aagaaacggg caggtgcagc tgttgttgtg
     1681 gctgctgagg gagttcatca aacaggacct gtattaatct gcgggtcatc ggctcagcac
     1741 gctgagtcgt cgtcctgttt gccagggtta aaatcaattc ccggcataag ggcgatattt
     1801 tcaatgtgca acatgttgtc ggcattgtca ctgcgctggg ttcgataaac agaaaacaga
     1861 gttcagcgtt agctgtcact tgattgctat gttccacccc gcccggtatc caaaccgcat
     1921 attgcggcgg caccatccac aaagcatttt ccaccgtaca ggtaattgca ccatgtaatg
     1981 ctagtatcag ctgtcctttg cggtgctgat gtacaggact ggttaactca tccgttccgg
     2041 cgtgaataca aaatgcgacc gcggcttcat ggtgtcggtc gggttcatag ccattgagat
     2101 tcaacctgtg catcattttg tccgaattta gcgataattt gtcattttag cttgattcaa
     2161 cataacaata aaaacggtaa ggtacagcct cgtttgtaac aatgagaagc atatgacctg
     2221 ttcaacttca ttaagcggca aaaacaggat tgtccttatc gctggcattc tgatgattgc
     2281 cacaacatta cgcgtcacct ttaccggcgc agcaccgtta ctggatacga ttcgttccgc
     2341 ttactcgctg acgacagcgc aaaccggctt attgaccacc ctgccattat tggcctttgc
     2401 gctaatctca cctttggccg ccccggtagc gcgacgtttt ggtatggaac gtagcctgtt
     2461 tgccgcgtta cttttgatct gtgctggtat cgcaattcgc tctctccctt cgccttactt
     2521 attatttggc ggtacagcgg tcattggcgg tgggattgca ttaggcaatg tcttactgcc
     2581 aggattaatt aaacgcgatt tccctcattc cgtcgccaga cttaccggcg catattccct
     2641 gacaatggga gctgcggcgg cacttggatc ggctatggta gtgccgctgg ctttgaacgg
     2701 ttttggctgg caaggcgcgt tgctcatgct gatgtgtttt cctctgctgg ctcttttttt
     2761 atggctgcca cagtggcgaa gccaacaaca tgcaaatttg agtacctcgc gcgccttaca
     2821 tactcggggt atctggcgtt cgccgcttgc ctggcaggtc acattgtttc ttgggagcaa
     2881 ctcactggtc tattacgtga ttattggctg gcttccggcg atcctcatca gtcacggcta
     2941 tagcgaagca caggcgggtt cactgcatgg tttgctgcaa ctagccacag cagctcccgg
     3001 tttgctgatc cctcttttct tacatcatgt gaaagaccag cgtggtattg cagcgttcgt
     3061 tgccttgatg tgcgcagtgg gcgctgttgg gctctgcttt atgccagcgc acgcgatcac
     3121 ctggactctg cttttcggtt ttggttccgg cgcaacaatg atactggggt tgacgttcat
     3181 tggtcttcgg gcaagttctg cgcatcaggc ggcggcactc tcggggatgg cacaatccgt
     3241 cgggtatttg ctggcagcct gtgggccgcc gctaatgggt aaaatacacg atgctaacgg
     3301 taactggtcc gtaccactga tgggtgttgc aatactttca ctactgatgg cgattttcgg
     3361 actttgcgcc gggagagaca aagaaattcg ctcatatccg gtgctatagt gacgtgacaa
     3421 atcatgcgtg aaagggagaa caaacacgat gaatattcag tgcaaacgcg tttatgatcc
     3481 ggctgaacag agcgatggtt atcgcgtact ggtcgaccgc ctctggccgc gcggtatcaa
     3541 aaaaaccgat ttagcccttg atgagtggga taaagaaatc acgccgtcaa cggaactgcg
     3601 caaagccttt cacggcgaag tcgtcgattt tacaaccttt cgcgagcaat atcttgcaga
     3661 actggcgcaa cacgagcaag aaggaaagcg gctggcggac atcgccaaaa aacagccgct
     3721 gaccctgctc tacgcagcaa aaaacaccac gcagaaccat gcgctggtgc tggccgactg
     3781 gctacgtagc ttgtgatttt agtacagcat ccggcggtta tttttcacca gccggatggt
     3841 cccgtcgcca caatgcccat tcatcaatcg tttcaccgcc cggtaatttg caattgttgc
     3901 tgaccccttg cgctgtcgac actggaatga gcgtcccgcc cttctgctgg caatagaccg
     3961 acgccggatt tgccatacca atctgcggcg gtttaggtgc ttctggctga gaaggggttg
     4021 aacaaccagc caggaccagc aagcaaggca gaacaaaact gataattttc atttattgat
     4081 ctcacatatt tatccagact tagagtatcg cggtatcgtt ttgttttgca gcactatttt
     4141 tattacattc actcaaaaca tattacgtct tgtttcatct ttgttgatga tgttttatca
     4201 tgcctg
//
LOCUS       DAJVUK010000234         4127 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.236, whole genome shotgun sequence.
ACCESSION   DAJVUK010000234 DAJVUK010000000
VERSION     DAJVUK010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.236"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(37..594)
                     /gene="ymfL"
                     /locus_tag="OQQ57_004054"
     CDS             complement(37..594)
                     /gene="ymfL"
                     /locus_tag="OQQ57_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YmfL"
                     /protein_id="HCS1958606.1"
                     /translation="MGKHHWKIEKQPEWYVKAVRKTIAKLPGGYAEAADWLDVTENAL
                     FNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDIEDVDNADINQR
                     LLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISE
                     SNDARECAAPGVVASIASGCGETNA"
     gene            complement(638..838)
                     /locus_tag="OQQ57_004055"
     CDS             complement(638..838)
                     /locus_tag="OQQ57_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1958607.1"
                     /translation="MKAYWDSLTKEQQGELAGKVGSTQGYLRLVFNGYKKASFVLAKK
                     LEQCTSGAITKSDLRPDIYPKD"
     gene            929..1603
                     /locus_tag="OQQ57_004056"
     CDS             929..1603
                     /locus_tag="OQQ57_004056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HCS1958608.1"
                     /translation="MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA
                     TKNIGDSMARHIEKCFDLPIGWLDQEHQTTNITKKPEVSITNKQITLVPVISWVQAGA
                     WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG
                     DDVIALMHDTGETTFKRLIEDGTQRYLKALHPNWPEPYIKINGNCSIIGTVIFSGKPR
                     RYKIKA"
     gene            3132..3668
                     /locus_tag="OQQ57_004057"
     CDS             3132..3668
                     /locus_tag="OQQ57_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416862.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HCS1958609.1"
                     /translation="MSFIQTLTGKKFNYINSTIDDIYIEDIAGALSNICRFAGHLPDF
                     YSVAQHSVLCSQLVAPEFAFEALMHDATEAYCQDIPAQLKRLLPDYKRMEEKIDAVIR
                     EKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPLLEGIPATEMFKVIPLSPGHA
                     YGMFMERFNELSELRKCA"
     gene            3659..4021
                     /locus_tag="OQQ57_004058"
     CDS             3659..4021
                     /locus_tag="OQQ57_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958610.1"
                     /translation="MRMNVFEMEGFLRGKCVPRDLKVNETDAEYLVRKFDALEAKCAA
                     LENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGDWQWTFQVGDLE
                     NVNITHWAVMPKAPEAGA"
BASE COUNT         1255 a          898 c          878 g         1096 t
ORIGIN      
        1 tcagttgcga gcgacggtag tgtgttgtta aactgttcat gcgttagttt ctccacaacc
       61 agaagcaatc gacgccacga cgcccggagc tgcacactcg cgggcgtcat tactttctga
      121 aatgcaaaaa attttgtaga caagtgctgc atgctcctgc agcttcgaaa ttgagagata
      181 cagctcgtcg ttaattgctg tcttctcatg cggttccact acaccgtctt cgattgctga
      241 acgaatctgt tttgaataac tgccgatctg ttcaatgact tccagcagac gctggttaat
      301 atcggcgttg tccacatcct cgatgtcagg aagagacaca aagacgccat ttgcagactg
      361 cgccacagca tcagcaatga agtgagtgcc accagcacgc tgtaaaacca ttgcccatcc
      421 cagcgggaaa atctgatcgc catctgcacg aaggcggttg aataaagcgt tttctgttac
      481 atcgagccag tcagccgctt cagcgtaacc acccggcaac tttgcgatag tttttctgac
      541 agctttcacg taccactcag gctgtttttc tattttccag tgatgcttac ccacgattag
      601 cctcatcgtt ctgtggttaa aaattgaaag tgttctgcta atctttcgga tagatatccg
      661 gtcttaagtc agatttcgta attgcacctg acgtgcattg ctcaagtttt ttagccagca
      721 caaaactggc ttttttatag ccattgaaaa ccagccgtaa gtagccttgt gttgagccaa
      781 cttttccggc caactcaccc tgctgttctt tggttaaaga gtcccaatac gctttcatac
      841 aatatgtacc tccagtgtac acatcacatg attgaaatga accttcaaga tacttgtacc
      901 ttagcggtac aagggtttta atttcgttat gaaaacaatc catgacatcc ggcggtctaa
      961 cgccagaaaa ctgagagatg gtgttggcgg gaattcttcc tttgccacta tgattgatcg
     1021 cgagccaacc cagaccagca ggtttatggg agatggtgct actaaaaata tcggtgacag
     1081 catggcacga cacattgaaa aatgtttcga cctgcctatc ggatggctcg atcaagaaca
     1141 ccagacaacg aacatcacaa aaaaacctga agtttcaatc actaacaaac aaataacgtt
     1201 agtccctgtc atatcatggg tacaggccgg agcatggaaa gaagttggct attctgaggt
     1261 tgatttgagc acagcagaaa cttatccctg ccctgtaccc tgtggcgaaa tgacttatat
     1321 cttgcgggtg attggtgatt caatgattga tgagtaccgt ccgggagaca tgatttttgt
     1381 tgatcctgaa gtccctgctt gccacggtga cgacgttatt gcgttgatgc acgatacagg
     1441 cgaaaccacc ttcaagcgat tgatagaaga tggaacacag cgttatctca aagcattaca
     1501 cccaaactgg cctgagccct acattaagat taacggtaat tgctctataa ttggcactgt
     1561 gattttctcg ggaaaaccaa gaagatacaa aataaaggcc taatcaatat ttatgaacct
     1621 gcttcggcag gtttttttat acttgacaat gtaccccatg gacacacaat gtaccccatg
     1681 gacacacaat gtaccaaaac gaaacaacaa acaggcagga tgcccacgaa gtagccgcct
     1741 ggggcatatg aagtccaaga tgattcgtta gcaacaaaac gcccatagga cgcttcgctc
     1801 tttaacaatt tgaatatttt cagcgtcaat gatctgttta gctccctaca agtaaatgta
     1861 gcgtagcacc atgataaatc ctgctagtgt ttagttaaaa atcgcgcgag agcaagaacg
     1921 acgtgagggc aggcaatact gatagtgtta ttgctattag tttatcaaaa atatttagac
     1981 gacccagatg aatattttta atacatactc cccctaattt aacaggagta aatgttgatg
     2041 aataacgaga catctatact caacaattgt atgatatgaa caattatata acataatgta
     2101 ggaaaaataa aaatggattg gcatgacctt atatcaaagg taattatcgg acttgttaca
     2161 ggctcaatcg cagcttactt aactgcgcga tatgcactcg gccgttatta taaagaaaaa
     2221 tggtgggaca aaagaataga tttgtatacg taattagttg actgtgttta tcttctaaaa
     2281 aacacagctg actattggta taaacatgag ttacatcacg cttcacaatt cccaacctac
     2341 tttagttaca aatcaaaaga agaaaatgaa atccttagca aatctttctc taatgagctt
     2401 gaaaaactca gtagaatagg tgagctatct tcattattct taacagaaga gtgtggggat
     2461 aaaatccgtt cattcattga aaatgaagaa aatctattta tacaatgggt gtttgatagt
     2521 atagagttga tagatgccca caagtcaaga cttgataaat taaaagtatt actagacgat
     2581 attatctctg aagcaaagag agagcttaag gtcaataaaa aacataacag cctaaagaat
     2641 ataaagtggt ccataactat gccggaccaa aaaaatgatg agccaattaa ttatcacgac
     2701 aatcattaaa acactttaga acccgctggg cgggttctat tcaaatatac tttgcacatc
     2761 acaaataaaa ctataacgtc cttcttcttt tcctaatatc ttatatctac ttatttataa
     2821 gcggcttaca gatcttcaac agataaacct aatgaaggcg acaatgttct gatgaatagc
     2881 caccttttta ctcaactgaa agcgcgttct gtcccttgtc attaagtgcc agttcgttaa
     2941 gtccaaaacc tccggaacgc gctttcaatt gagtggggaa aataactggc gatggcagcc
     3001 gcccgttgca ctaagtgcct ctggatgggg catttactga aacgaaacca aaacttttaa
     3061 tcgccttatg gcgagggatt cgtgcaacca aaaatcgtgc ggtgcagcgc accaattaag
     3121 gagaactaac gatgagtttt atccagactc ttaccggtaa gaagttcaat tatatcaact
     3181 ccaccattga cgatatttat atcgaggata tcgccggtgc gctttcaaat atctgccgct
     3241 tcgcgggaca cttgccggat ttttacagcg tggcgcagca ttccgttctg tgcagtcaac
     3301 ttgtggcgcc agagttcgcc tttgaagcgt taatgcatga tgcaacagaa gcgtattgtc
     3361 aggacatccc cgcgcaactg aaacgccttc ttcctgacta taaacggatg gaagaaaaaa
     3421 tagacgccgt aatccgtgag aaatacgggt tacccccggt tatgagcacg cccgtgaaat
     3481 atgccgatct catcatgctg gcaaccgaac gccgcgatct tgggcttgat gatggctctt
     3541 tctggcctct actagaaggt atcccagcaa cagagatgtt caaagttatt ccactgtcgc
     3601 caggccatgc ctacgggatg tttatggaac gttttaacga attatcggag ttacgcaaat
     3661 gcgcatgaat gttttcgaaa tggaagggtt tcttcgcggg aaatgtgtac cgcgagatct
     3721 gaaagtgaat gaaacggatg ctgaatacct ggtgcgtaaa ttcgatgcgc ttgaagctaa
     3781 atgtgcggca ctggaaaaca aagtaatacc agtgtcaact gaactgccac cagcaaatga
     3841 aagtgttttg ttattcgatg ctaacggaga aggctggcta attggctggc gttctctctg
     3901 gtacacctgg ggacaaaaag aaaccggaga ctggcagtgg acatttcagg tcggggacct
     3961 tgaaaacgtc aatatcactc actgggcagt aatgccaaaa gcaccggagg ctggagcata
     4021 atgaccactt ttaccgacaa agaactgatt aaagaaatta aagagcgtat cagcagcctt
     4081 gacgtgcgag acgatattga gcgccgtgct tatgaaatcg cactcct
//
LOCUS       DAJVUK010000235         4082 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.237, whole genome shotgun sequence.
ACCESSION   DAJVUK010000235 DAJVUK010000000
VERSION     DAJVUK010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.237"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            31..930
                     /gene="pgrR"
                     /locus_tag="OQQ57_004059"
     CDS             31..930
                     /gene="pgrR"
                     /locus_tag="OQQ57_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator PgrR"
                     /protein_id="HCS1958611.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRLKYKGAV"
     gene            1267..2880
                     /gene="mppA"
                     /locus_tag="OQQ57_004060"
     CDS             1267..2880
                     /gene="mppA"
                     /locus_tag="OQQ57_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide ABC transporter
                     substrate-binding protein MppA"
                     /protein_id="HCS1958612.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRIMYIVKH"
     gene            complement(2931..3962)
                     /gene="ynaI"
                     /locus_tag="OQQ57_004061"
     CDS             complement(2931..3962)
                     /gene="ynaI"
                     /locus_tag="OQQ57_004061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HCS1958613.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
                     KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
                     KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
                     SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
                     YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
                     NITPPEQGR"
BASE COUNT         1145 a          897 c          961 g         1079 t
ORIGIN      
        1 aatgattaat agattgcatg gagatactga atgaagcgtg aagaaatcgc tgatctgatg
       61 gcgtttgtcg tcgttgcaga ggagcgtagc ttcactcgtg cagcagcccg cctgagcatg
      121 gcgcagtcag ctttaagcca gatagtgcgt cgtatagaag aacgattggg attgcggctt
      181 ctgacgcgaa ccacgcgcag cgttgttcca actgaagcgg gcgagcatct tttgtctgtt
      241 cttggcccta tgttgcatga catagattca gccctggcat ccctgagcga gctgcagaac
      301 cgcccatccg ggacaatacg tattactact gtagaacatg cagcaaaaac gatattgtta
      361 ccagcaatgc gcacattcct gaaatcgcat cctgaaattg atattcagct caccattgat
      421 tatggtttga ccgatgtcgt ttctgaacgt tttgatgcag gcgtccgtct gggtggggag
      481 atggataaag atatgatcgc cattcgaatc gggccagata taccaatggc tattgttggc
      541 tcaccggatt atttttctcg ccgaagtgtt ccaacgtcag tgtcacaatt aatagatcat
      601 caggcaatta atttgtatct tcccacatcg ggtacagcaa atcgctggag attaatacgc
      661 ggtggacgtg aagttcgtgt tcgcatggaa ggtcagcttt tactgaatac gatagacctg
      721 atcattgatg ctgcaattga tgggcatgga ttggcgtatc taccttatga tcaggttgag
      781 cgggctatta aagaaaaaaa actgatacgt gttttggata aattcacacc agatttaccc
      841 ggttatcacc tgtactatcc acaccgtcga catgctggct cggcattctc attatttata
      901 gataggctga agtataaagg tgctgtttag cactacttgc tgatacatta atttaatttc
      961 tctcttaacg tattctcagt tcctttcaac gttttggtta ttttttattc ttcgtacaat
     1021 ggcgacagat gctgattttg ataccgaaaa ctggtttgaa cgtgcgaagc ctgaacgtag
     1081 tattcggtgt tctatgtgct ttgccgcatt ttggcgtcga ttatttacac taaatctgat
     1141 ttaatatatt gatacataaa acattttatg cttcctgtgt cacttttttg atggaagttg
     1201 tttgcatttc tttaaggcga aacaaataat tacgcatcaa ttttaatgtc ggttagaggg
     1261 aaacttatga agcactctgt ttcagtcacg tgttgtgcgc tgttggtcag cagcatttct
     1321 ctttcgtatg ctgcagaagt tccgagcggc acagtactgg cagagaagca ggagctggtg
     1381 cgccacatta aagatgagcc tgcgtcgctg gatcccgcta aagccgtggg cctgccagag
     1441 attcaggtca ttcgcgatct gtttgaagga ctggtgaatc agaacgagaa aggggagatt
     1501 gtccccggcg ttgcgactca gtggaaaagt aatgacaacc gtatctggac ttttaccctg
     1561 cgcgataacg caaaatgggc ggatggcaca ccggtaacgg cgcaagattt tgtctacagc
     1621 tggcagcgtc tggtggaccc gaaaacgcta tcgccatttg catggtttgc cgcgctggcg
     1681 ggaatcaaca acgcacaggc gattattgat ggtaaagcta cgcctgacca gcttggcgtc
     1741 accgcagttg atgcccatac cttgaaaatt cagcttgata aaccgttgcc gtggtttgtg
     1801 aatttaaccg ctaactttgc cttcttcccg gtgcaaaaag ccaacgtaga aagcggtaaa
     1861 gagtggacga aacccggaaa tctgatcggc aatggcgctt atgttcttaa agaacgcgta
     1921 gtcaatgaaa aactggtcgt ggtaccgaat acccattatt gggataacgc caaaacggta
     1981 ctgcaaaaag tgaccttcct gccaattaat caggaatccg cagccactaa gcgttacctc
     2041 gcgggggata ttgatatcac cgaatccttc ccgaaaaata tgtatcagaa gctgttgaag
     2101 gatattccgg ggcaggttta tacgccgccg cagctcggga cctattatta tgcgtttaac
     2161 acgcaaaaag ggccgacggc agatcagcgc gttcgcctgg cattaagtat gacgatagat
     2221 cgccgcctga tgaccgaaaa agtgttggga acgggcgaaa agccagcgtg gcattttaca
     2281 ccagatgtta ccgccggatt tacgccggaa ccttcgccgt ttgaacaaat gagtcaggaa
     2341 gaactgaatg cgcaggcaaa aactttgttg agcgcagctg gttatggtcc gcaaaaaccg
     2401 ctgaagctga cgcttttgta taacacttca gaaaaccatc aaaaaattgc gattgctgta
     2461 gcatcgatgt ggaaaaagaa ccttggcgta gatgttaaat tgcaaaatca ggaatggaaa
     2521 acctatatcg atagccgtaa caccggcaat tttgatgtta tccgcgcctc atgggtgggg
     2581 gattataatg aaccctccac tttcctgaca ttattaacgt caacgcattc aggaaatatt
     2641 tcacgcttta acaatccggc atacgacaaa gttctggccc aggcatcgac ggaaaatacc
     2701 gttaaagcgc gtaatgccga ttacaacgcg gcagaaaaaa tcctcatgga gcaagcaccg
     2761 attgcaccaa tttatcaata taccaatgga cgattaatca agccgtggct gaaaggttat
     2821 cccattaata acccggaaga tgtggcgtac agccggatta tgtatattgt gaagcattga
     2881 tgtgatggga actggcgtta cccttgtgga taacgccagt gatgtctgat ttagcgcccc
     2941 tgttccggcg gtgtaatgtt atccatatac agcgtctggc tggggaaggc aaagtccgcg
     3001 ccgtgtgact gcacaatatc gataatcttc aaataaacgt cttgttgtgc agcaagccat
     3061 tcagcccata ccgtggtttt ggtaaagcaa taaaccataa tattcaatga cgagtcggca
     3121 aactggttga aataaaccag taaggtttgt cgctggtcga tggccgggtg atttttcagc
     3181 atctcacgta cggcttcgac aataacgccc acttttgccg catcctcata acgtaaacca
     3241 atggtcgtgg taatgcggcg gttggtcatt cgtcctgggt tttctacgct gatcgacgaa
     3301 aacagcgagt tcggtacgta caatggacga ttatcaaagg tcgtaatttt ggtaattcgc
     3361 cagccaattt ccgctactgt accttcgata tttctgtccg gtgaacggat ccagtcgcca
     3421 atactgaaag gacggtcgaa atagagcatg atcccggaaa agaaattact cagaatatct
     3481 ttaccggcca taccgacagc cagaccacca ataccaccaa aggtcagcaa gccagaaagg
     3541 ctcatgccga aatgttcgcc ataaagcaga acaagcacca caataatggt gattttgata
     3601 atgcgcgaca taatccgcgc actggtgata tcgcgacctt ttttaatctg ctgtttttca
     3661 aactgattaa tcagcaaaaa tagcttaatc gtcagaataa ccgcaatcag ggacgtacag
     3721 ataaaatcga taacgcctgg ggtgataaat ttgagtttat agttttctat aacataatta
     3781 ataatgctac caacagcact gataattatg gtgtagatta aaaattgcac cgcatggaat
     3841 aaaaaacctt ttcttttacg atttccgcgg cgaaaccaaa agctcatcag aatcaatgct
     3901 gcgcagctac cgaaaataat gaccagatta agcgcattat ttgtaaacag ttcagcgatc
     3961 attgttttat caggctcctc cagataattg tcgtcatgcc ggaaccccct ggcggggcta
     4021 ttttaccgcg acaattcatt cagatcatca atagtcaggg aaggaagtag caacattagc
     4081 ta
//
LOCUS       DAJVUK010000236         4060 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.238, whole genome shotgun sequence.
ACCESSION   DAJVUK010000236 DAJVUK010000000
VERSION     DAJVUK010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.238"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1036)
                     /locus_tag="OQQ57_004062"
     CDS             complement(<1..1036)
                     /locus_tag="OQQ57_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HCS1958614.1"
                     /translation="MREINMLRNISSCLFPHISKITSPNHYLSEWDDWEKQGLPEEQR
                     TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
                     IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
                     KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
                     IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
                     FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
                     TQWTSFSTEEN"
     gene            1527..1637
                     /locus_tag="OQQ57_004063"
     CDS             1527..1637
                     /locus_tag="OQQ57_004063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HCS1958615.1"
                     /translation="MLIGYVRVSTNDQNTDLRRNALNCAGYELIVERMGA"
     gene            1917..2912
                     /gene="pgl"
                     /locus_tag="OQQ57_004064"
     CDS             1917..2912
                     /gene="pgl"
                     /locus_tag="OQQ57_004064"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HCS1958616.1"
                     /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTIEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     PRGFNVDHSGKYLIAAGQKSHLISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(2953..3905)
                     /locus_tag="OQQ57_004065"
                     /pseudo
     CDS             complement(2953..3905)
                     /locus_tag="OQQ57_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308823.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT         1089 a          827 c          948 g         1196 t
ORIGIN      
        1 aattctcctc ggtggaaaaa gaagtccatt gtgtagaaac ctcccgacga tctgcttcag
       61 gaaaccaggc tgccacagtt tcgggaagag gggggatctg aaagttctgc cccccttcag
      121 tgatgactct gatatggcgc gaatgtaaat tttgcggcaa catctggcgt aaaaacagtc
      181 tgttttggtc tgacagggaa atacgaaact gaggcccgtt aaaatttgga accgaagttt
      241 gctgtattaa gaatagcaga gtttgatctg ataaggggtt atttgcaatc tcaatagtta
      301 tatgaggatc taaacgaaaa agatttgtcg ggattgtagt tatttggttg ttttcaaaat
      361 aaaaaaatct tctcatgata atattttctt ggatgtttgg taagttgctt aatctattgc
      421 tatatgcaaa aagaagttgc agtctcctag gtaaaggggg cagttcagta agatggttgt
      481 gcgcaacctt aagtatctta agattagaag gcagagatgg aagagtttgc agttcgttgt
      541 tcctaacctc aagttttttt aaattcaagg gtaatgaagg cagtgtggat aacctattat
      601 actctgcgct tagtgatttg atggtgtctg gtaataacgg cagattctct aattgatttt
      661 cggacacatc caaagttatt agataatgtg gtaatgcaga tatatgtgtt aagaaattat
      721 ctcttgcaat aagttcttta atattttcag gtaaatcagt aaggatggtt aatttattac
      781 agctcacatc aagcttttta atgcaagcag ggagtacagg taacgaggaa agcgccaagg
      841 ctcgcaggtc cagtttatgc cccttagagg taagacatgc acgaagtctt cttaccgcct
      901 cagtacgctg ttcttccggt aacccctgtt tctcccaatc atcccattcg gacaaataat
      961 ggttggggga tgtaattttg ctgatatgtg gaaataaaca ggatgaaata tttctgagca
     1021 tattaatttc tcgcatatgg atatggaatt agattgtgaa taaattgtat ttaatgtatc
     1081 tctcctaatg aggagggtgt ttcagaatat tcgccataag ggaatgagtg ttatatcatg
     1141 ctttctatcc tggtaagtat atttgctttt ttcgtatatt tggttcatct ttttttgatg
     1201 ttttacatat tcacaatgca gaggatttat accagaagac attagtcttg agtaagatac
     1261 tacaacatct ccaactattt tagccagcct gactacttga cttggtaata tttgttgcta
     1321 ataatcatgt ataaaataag cttatataca tagtaacttc agcaaaggat ttagtaatga
     1381 tccaaatcat atatcaatgt actgtttttt tctttaaaaa aacagtacat tctattttat
     1441 aatgactgtg tattcccatg gaaggagatc acccaattct cccccccgac ttttgacgca
     1501 gtgtcttgtt aacaggggga tttaccatgc ttattggcta tgtacgcgta tcaacaaatg
     1561 accagaacac cgatctacga cgtaatgcgt tgaactgtgc aggatatgag ctgattgttg
     1621 agcgaatggg agcttgattg gaagttgtta gggtatggtg tttacggtcg ttgatatggc
     1681 gaacaaacgc ggggagcgtc acgctcccta aatggtcgcg aaaatatctg tggcattgtc
     1741 aaatttgtga cggtgactaa tattttaatg atatgccatt cgaaatggtg tgctaacgta
     1801 ttgatttaat tgtgacgcga tgttgtattt tatcgcgttt tgttgtctgt ttttcattcg
     1861 cttgatgttg ctatttacat gaaaaataaa gaatttattg tttttgaggt gtgtttatga
     1921 agcaaacagt ttatatcgcc agccctgaga gccagcaaat tcacgtctgg aacctgaatc
     1981 atgaaggcgc actgacgctg acacaggttg tcgatgtgcc ggggcaggtg cagccgatgg
     2041 tggtcagccc ggacaaacgt tatctctatg ttggtgttcg ccctgagttt cgcgtcctgg
     2101 cgtatcgtat tgccccggac gatggcgcac tgacctttgc cgcagagtct gcgctgccgg
     2161 gtagtccgac gcatatttcc accgatcacc aggggcagtt tgtctttgta ggttcttaca
     2221 atgcgggtaa cgtgagcgta acgcgtctgg aagatggcct gccagtgggc gtcgtcgatg
     2281 tggtcgaggg gctggacggt tgccattccg ccaatatctc accggacaac cgtacgctgt
     2341 gggttccggc attaaagcag gatcgcattt gcctgtttac ggtcagcgat gatggtcatc
     2401 tggtggcgca ggaccctgcg gaagtgacta ccattgaagg ggccggcccg cgtcatatgg
     2461 tattccatcc aaacgaacaa tatgcgtatt gcgtcaatga gttaaacagc tcagtggatg
     2521 tctgggaact gaaagatccg cacggtaata tcgaatgtgt ccagacgctg gatatgatgc
     2581 cggaaaactt ctccgacacc cgttgggcgg ctgatattca tatcaccccg gatggtcgcc
     2641 atttatacgc ctgcgaccgt accgccagcc tgattaccgt tttcagcgtt tcggaagatg
     2701 gcagtgtgtt gagtaaagaa ggcttccagc caacggaaac ccagccgcgc ggcttcaatg
     2761 ttgatcacag cggcaagtat ctgattgccg ccgggcaaaa atctcacctc atctcggtat
     2821 acgaaattgt tggcgagcag ggactactgc atgaaaaagg ccgttatgcg gtcgggcagg
     2881 gaccaatgtg ggtggtggtt aacgcacact aaccgctgat ttaaccggcg cagtctctcc
     2941 tgcgccggtg tattaaccta tctcctgtaa cgcatgtctc tggcgttcga cgatattggt
     3001 ccacaaattg tctttatcgt cagtccacaa attaatcagc aaggcaaaaa agcgttcagc
     3061 tgccggagaa agcacggcat ctttgcggcg aataatcccc aatgtccgac gtataacggg
     3121 ttccaccagt gggataccaa taatcgaaga atagggcgca tggggcattg ccagaccagg
     3181 aagcgccgaa atccccagtc ctgcctccac tagtcctaat gacgtcgaaa gatgacgcac
     3241 ttcgtaaaac cagtccagct tccagggctt gtcggccagc tgttgttcta tcaacagtcg
     3301 gttgccgctg gaggagcgta cgccaatcat tttgtaaccc actaactcct gccattctac
     3361 aagctgcttt ttggccaatg gatggtcacg ccgacaggca gcacgaacgg ctcgttgacc
     3421 agtggggtaa aatcaatgga tgaatttgtg acgttgttca tgtttatgcc aaagtctgat
     3481 tcgttacaca gcaccgattc catgcaatta ttcgtgcctt gttccagaat ccgcacttta
     3541 atattgggat acagctcatt aaatttaccg attgccagcg gtaaaaaata aaatactgcg
     3601 gtcggaatac acgctaacgt caccatacca cgatgataag cattcatatc acgaatatta
     3661 aaaagcgttt catcgaattt ctttattaat tcccgcgcct ccgggagcaa cctttttcct
     3721 gcttttgtta acgtaacctt gcgagttgta cgctcaaata gttgaatatg taaatcttcc
     3781 tccatctttt ttattcttcg cgttaatgca ggttgcgtaa tattgagtaa tttagcggca
     3841 ttgttaaacg aactggactc tgccagtatg acaaatgcct tcatacttga taattcatgc
     3901 ttcattatta ctccggaaaa tggaagcgac gattttgggt ggctggccgt taaaaatttt
     3961 aactgcattt agccaactta aattaatgaa aaaatgttat taatcgttga gctaaagtca
     4021 ttagagatgc tttgccctta atgtaaccat atcgcaataa
//
LOCUS       DAJVUK010000237         3920 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.241, whole genome shotgun sequence.
ACCESSION   DAJVUK010000237 DAJVUK010000000
VERSION     DAJVUK010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.241"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            357..668
                     /locus_tag="OQQ57_004066"
     CDS             357..668
                     /locus_tag="OQQ57_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HCS1958617.1"
                     /translation="MFNVITHPAALDELLELPDNLRGRMTRLIERLEQEGNKMKMPHS
                     RVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEM
                     N"
     gene            668..955
                     /locus_tag="OQQ57_004067"
     CDS             668..955
                     /locus_tag="OQQ57_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1958618.1"
                     /translation="MKVKGVPFSQVKQKLLSTPEAVKGYEDADKELEMVEMLYEMREK
                     AGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAHACGATIDIHAVY"
     gene            complement(1492..2679)
                     /locus_tag="OQQ57_004068"
     CDS             complement(1492..2679)
                     /locus_tag="OQQ57_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HCS1958619.1"
                     /translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
                     LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVF
                     TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPRIFTVIHTWGRDQQWHPHI
                     HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKR
                     EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPVSRLEHYAGQDEIGLR
                     YNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITE
                     TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
                     WCG"
     gene            complement(2679..3044)
                     /locus_tag="OQQ57_004069"
     CDS             complement(2679..3044)
                     /locus_tag="OQQ57_004069"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958620.1"
                     /translation="MARSAKPRKRKPASQRSKLPRYVVKLHEDDFFDEEDAEVLRFDS
                     FDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILSGISAGG
                     MYCPECGTVHWPDGVAPPF"
     gene            3129..3458
                     /locus_tag="OQQ57_004070"
                     /pseudo
     CDS             3129..3458
                     /locus_tag="OQQ57_004070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
     gene            3488..3571
                     /locus_tag="OQQ57_004071"
                     /pseudo
     CDS             3488..3571
                     /locus_tag="OQQ57_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
     gene            3571..3666
                     /locus_tag="OQQ57_004072"
                     /pseudo
     CDS             3571..3666
                     /locus_tag="OQQ57_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858351.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT         1006 a         1038 c          922 g          954 t
ORIGIN      
        1 ttaccagcgc cccaccagac ccggtgacat caccccccgg atcatggacg actgggggca
       61 gtaatcatgc cgggtctggc tggctaacac cccattataa ggggtacgaa taaagtaacg
      121 ggggtaaggt gaaatctgtc aatcagtacc ggcttacgcc gggcttcggc ggttttactc
      181 ctgtgccata tgcaacaacg gagtgccgcc ttccatgccg ctaacgcggc atcaaaaaat
      241 ccctcttctc cagttgcccc cctccgaact cagagtgtat tttcatttat tgatgaaatt
      301 tactgtttgc gcaattttcc tgttttagtg tattttgtca ttctggaggc tataatatgt
      361 ttaatgtgat tactcacccg gccgcactgg atgaacttct agaattacca gacaatctgc
      421 gtggtcgtat gaccagactg attgaacggc tggaacagga aggtaacaaa atgaaaatgc
      481 ctcacagccg tgtaattggc ggagggcttt ttgaactgag agtcggggat aaaaatatcg
      541 caaggacact gtacgcttat gcaacgggta acgaaatcta tctgctgcat gcatttgtga
      601 aaaaaacgca aaagacacca acgaaagcta ttgaaattgc caggatgcgt ctgaaggaga
      661 tgaactgatg aaagtaaaag gtgttccatt cagccaggta aagcaaaaac tactcagtac
      721 tccagaagct gtcaaagggt atgaggatgc tgacaaagaa ctggagatgg tggaaatgtt
      781 atacgaaatg agagaaaaag cgggattaac aaagtcagca ctggccgaac gaatggggtt
      841 acgcccgtca gccatcagtc gcctggaaag taacccttta ggggccagca tgaaaacttt
      901 gacaaaatat gctcatgcct gtggcgcaac catcgatatt cacgctgtct attgaggggt
      961 ccgcttggaa ttcggaaaat aaaccacgtt aagactattt tttagataaa tgactttcag
     1021 gaatcgccaa gatggcggga taacagcggt tttggtgtcc taaatcgtac aattctgtac
     1081 atccacgcaa gggaatgtac ggaagtaagc cagacggtta tcggacggtc agaacatttc
     1141 gtacagcctt tacgttcagt gagttagctg gcctggacgt aaccactcgt tagctcaatt
     1201 ctcttagcgt gggaaaattt ccgaattcca agcggacccc tttatccttg ccccgctgaa
     1261 tgaggaaacg ctgttccggg ggattatgct gaacgtcttc cgttcatcga taggaattaa
     1321 aaccccaaaa agattaaaaa acaccacaaa acggatgttt cttcaacacc acttttgctc
     1381 atatgaacgg aaccgacgat taaactggat ggctctgatt gattcagggt atgaatggcg
     1441 gttttttgct ccgtttccct caaaatggac gctacttacc ctctgcggct ctcagccgca
     1501 ccaccgcatc cgggccagcg gctcatgcat caggacctgc tctgccagac ggtagccccg
     1561 cttcagcccc gtaaaacgca tctgactccc gcacagcacg cacttcagcg ggtcaacctt
     1621 cagtaacctc tgatacatcc ctctccaggt gatttgcatc gccgtttttc tcactgtctc
     1681 cgttatgatg tacaccactt cttccagtaa ccgccgtttc gccggactca gaaaaccgta
     1741 gtacctcacc atacggaacc ccttatccgc cacatgccag gagaaccttt ccatgaactc
     1801 atctccactc atcaacaggt attcttcccg ttttgttcgg tgactgttgt aacgcagtcc
     1861 gatttcatcc tgaccggcat aatgctccag acgactcacc ggcaccggtg gctttttcag
     1921 gtaagagcca aagtacaccg ccacatgggt ggcattatcc atcacccggg atacgttgac
     1981 attccagcca cggcggtaat gcgtgtccag gaagcgattc cattcccgtt tactgcttcc
     2041 ttctgctgcc agcgcatccg gcatcaccag gtcagggtat ttccgtgaca gtaaccgtgt
     2101 tatccggtag cgccacatgc tcatcacctt acgggcgtaa aaatgaagat ttttccaggt
     2161 gtggcccgac gtcacaccac cggcagttgt cgataaatgg atatgcggat gccactgctg
     2221 gtcacgcccc catgtgtgga tcaccgtgaa tatcctcggc tccacatctg cctgatggca
     2281 gatttccagt atcacatccg ctgcaatgcg gctcatctct gccagcaacc accggttgtg
     2341 gaacaccagg gaccagtact ggcagggtaa cgtgaacaca atatgctgcc atgggcagtc
     2401 ggggaccagg ctcagcagat actgtatcca ctgtgcgcca gccttcaccc cgcagtgcgg
     2461 gcaggagcgg cttttacacc ggaagcagac cttttttgta tggcaacagt ccggtgatga
     2521 acagcaccac tgtgtatacc ccatcagtgt ggtcccgcac gccatgattt tggtcaccga
     2581 ctcaatcacc accggacgta ctgccccttc cggctgcttc tccagccagt taagccagcg
     2641 gtttccctgc tgaaagatat cggcaaaacg gggaagcatc agaagggcgg ggcgactccg
     2701 tccggccagt gaaccgtgcc acactccggg cagtacatac cgccggcgct gataccggaa
     2761 agaatggtcg caaattcccg ctccgtgcag cgggcaattt ccggataccc ttcgtcatca
     2821 acacgtacaa accagaagac cagttttttg tttccggcat ccacaaagaa cggaatattc
     2881 aggtctgcgc aacactcaac ggcatcatca aaactatcaa agcgcagaac ttctgcgtct
     2941 tcttcgtcaa aaaaatcatc ttcgtgaagc ttcacgacat agcggggaag tttgcttctt
     3001 tgagaggcgg gtttacgttt acggggttta gctgaacggg ccatataacc acctgaaaga
     3061 caatgacatt gcctgttttt ataacggtaa ttgcagacca tgacaagccg cagccgtcag
     3121 gctgcctact cgagcttcag ctcaataaag gcgaatatcg acataaatta ccccgatgga
     3181 tcttttttgc aaatcagggt gaattcacga ccggtgatta cgaagaaatc atgaataagg
     3241 ccagcgccct gagtctggta tcgaatgcaa tcctgtactg gaatacatca agaataagca
     3301 atattgttga agggttacgt gaaaatggtg aggttattga tgatgacgta ttagcccata
     3361 tatcattact gccctataaa cacgtattac ctaatggtac ttattttgtt gatggagaac
     3421 cttacggtac tgagcctacc gaaagagcaa aaccgtaagt ttctgttcaa atgctcccgc
     3481 tggtccatcc ggacagatta tcgaccatca ggctgtacag gcctgggcgg acagcctcag
     3541 tactgacaat ccgttaccgg tgccacgctg atggaacaga agtggaccag taaggcgctt
     3601 tctgatttgg cgcggttata tgattttctg gtgctggcca gtaaacctgc tgccgccaga
     3661 atggtacacg tataggaaat tgaaaaacca gacgataccg ctgtccacgc cttatgccac
     3721 gtgagctttt ctgcttttcc ctccactccg gtgttttctc tctctgcatg gtcgattctt
     3781 ataccgcaac aggctgtttt ttatacttgc accgattccc gggcacactt agcctgtgtc
     3841 aggccggcat atacctcagc agactgatat cccgcgcgtt tttcttcagc ccctccacat
     3901 tcagtcccgc gatggcccgg
//
LOCUS       DAJVUK010000238         3912 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.242, whole genome shotgun sequence.
ACCESSION   DAJVUK010000238 DAJVUK010000000
VERSION     DAJVUK010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.242"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(313..732)
                     /locus_tag="OQQ57_004073"
     CDS             complement(313..732)
                     /locus_tag="OQQ57_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309968.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1958621.1"
                     /translation="MVHEDKARKEFASRLALACENAGYEQHGRQAEIARRMKLTPKAV
                     SKWFNGETIPRREKLRELATLIGTTPTYLLGEDTEESGQVRFYQELNPRQKIIIDLLD
                     ELPDSETDELLKTLEEKKQKYNAIYEELARKKKQKAS"
     gene            812..1066
                     /locus_tag="OQQ57_004074"
     CDS             812..1066
                     /locus_tag="OQQ57_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1958622.1"
                     /translation="MNQKTLEDVIKTVRVAVVADVCGVSQRAIYKWMDNGKLPRTEYT
                     GETNYAEKIALASNGLFSADAILTIGRNKTTTKKLMGVDS"
     gene            1063..1488
                     /locus_tag="OQQ57_004075"
     CDS             1063..1488
                     /locus_tag="OQQ57_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCS1958623.1"
                     /translation="MKIKHEHIRMAMNAWAHPDGEKVPAAKITKAYFELGMTFPELYD
                     DSHPEALARNTQKIFRWVEKDTPDALKKIQALLPAIEKAMPPLLVARMRSHSSAYFRE
                     LVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNIVAVH"
     gene            1560..2630
                     /locus_tag="OQQ57_004076"
     CDS             1560..2630
                     /locus_tag="OQQ57_004076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer"
                     /protein_id="HCS1958624.1"
                     /translation="MANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSAS
                     RNVTRGHIDVTTEDLASALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGN
                     ISQTAKSPAERKRAQRERERKREQNGDCHGASRYVTHMSRRVTTDKDTDKDTDQEDQN
                     TMVHGVKNATNQAGDVQTVNPGQPAGTTPEADSAYALKADSGAVQQAMTASPEQSHQL
                     QQPEADSAIQREADRVVPENTGQSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWK
                     ARLREGVPPEAMLDGVRRYARYLAATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGT
                     NNQRCVNHISEPDNEIPPGFRG"
     gene            2671..3093
                     /locus_tag="OQQ57_004077"
     CDS             2671..3093
                     /locus_tag="OQQ57_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HCS1958625.1"
                     /translation="MAKVFTQEEREKIKGQVLELVRQSGRETLRQLEAKTGATRYLMS
                     VLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKLKKPSAVDPDLIWSLPDG
                     EIRRYDSRLNIICRECRKSEVMQRILSFYQGNFQEVMA"
     gene            3090..3395
                     /locus_tag="OQQ57_004078"
     CDS             3090..3395
                     /locus_tag="OQQ57_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001266129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4406 domain-containing protein"
                     /protein_id="HCS1958626.1"
                     /translation="MRVRVYIAGPMTGYKNFNREAFHNAEEELKREGHTVLNPAVLPD
                     GLTQPQYMDICMAMIRCVDAIYMLKGWQRSAGAKAELALAEKLGHAVIFQETASVQD"
     gene            3382..3837
                     /locus_tag="OQQ57_004079"
     CDS             3382..3837
                     /locus_tag="OQQ57_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000335116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HCS1958627.1"
                     /translation="MCKTNYQALRERYSPIQVPECPVCGDEMSIQRIFSRTHIVYACT
                     GEGDDGYFKTGRTFADEHYLKSRVTVVDVSAPDVLALLKELEVKDKRIAELTDALTQM
                     INAHKTTIRFGHERITECGGDCDSPEKMISENPDIRMAEAVLRAGIKTE"
BASE COUNT         1071 a          842 c         1050 g          949 t
ORIGIN      
        1 atcgatagta tccatgctga cctcatttcc ccttaacgcc ggggtagcgg aacaaaaacc
       61 tgctgcatag ttattaaagt tgaaccctgc cgtcatgttc ttacgcctcg ggctggctac
      121 ttaacccctg accactgcct ggtaactcga agtattgccc tgcattctgt ggggcggggt
      181 gggtggcagg tatataatgt actttgcgtt cattgttgta aagtgcttat ggtacatttt
      241 gtgtgtaaaa aaatgagatg ggataaagtg aagcacaaac ccggaggaag gcgctaccgg
      301 atttatgctg gtttaagagg ctttttgttt tttctttcgt gctaactctt cgtaaattgc
      361 attgtacttc tgttttttct cttcaagagt ttttaaaagt tcatctgtct cactgtcagg
      421 gagctcgtcc agaaggtcaa tgatgatttt ttgtcttgga tttaactcct gatagaaacg
      481 tacctgtcca ctttcttctg tatcctctcc caaaagatag gttggtgttg ttcctattag
      541 tgttgctaat tcccttaatt tctcccggcg aggaattgtt tcgccattaa accatttgct
      601 aaccgctttt ggtgttaatt tcattcgacg ggcaatttct gcctgccttc catgttgttc
      661 ataaccagcg ttttcacagg ctagcgcaag cctactggcg aactctttac gcgctttatc
      721 ttcatgaacc ataagttcaa tgatattcgc tcttgaatgt actgtcagtt ctgttatagc
      781 atgtactcaa agttcacatt gtgagggtga tatgaaccag aaaacacttg aagatgtaat
      841 caaaactgtt cgcgttgctg ttgtggccga cgtttgtggt gtcagccaaa gagcaatcta
      901 taaatggatg gataacggaa aattgcctcg cacagaatat accggcgaaa caaattacgc
      961 tgaaaaaatc gctcttgcat caaacggatt attttctgcc gatgcaattt taactattgg
     1021 caggaataaa actactacga aaaagctgat gggagttgat tcatgaaaat caagcatgaa
     1081 cacatccgca tggcgatgaa tgcctgggcg catccggacg gcgaaaaagt accggctgcg
     1141 aaaattacca aagcgtattt cgagctggga atgacgttcc cggaactgta tgacgacagc
     1201 catccggaag ccctggctcg caatactcag aaaattttcc gctgggtgga gaaagacacc
     1261 cctgatgcgc ttaaaaaaat tcaggcgttg ttaccagcta tcgaaaaagc aatgccacct
     1321 ctgctggtgg cccgaatgcg cagccatagc tcagcctatt ttcgggaact agtggagacg
     1381 cgggaacgac tggtgagaga cgctgatgat tttgtcgcag tggcgatcgc tggtttcaac
     1441 cagatgaatc gtggtggccc tgcaggaaat attgtggctg tgcattgact cgcaatattc
     1501 ataccggatc acttccggca atttgtgagt aaaaagattc ggtatcaaaa gaggtgagta
     1561 tggctaacgc ctggctcaga ttatggcatg acatgccaaa tgaccctaag tggcgaacaa
     1621 ttgccagggt gtcagggcag ccaattgcaa cagtgatggc agtgtatatc cacctcctgg
     1681 tgagcgcgtc acgaaatgtc acgcgaggtc acattgatgt cacgacagaa gatttggcaa
     1741 gtgcgctcga cgtgacagaa gaggtaattg attcaatttt gcagacgatg caggggcggg
     1801 tacttgatgg tgatttaatc actggatggg aaaaacgcca ggtgctgaaa gaggacaacg
     1861 gcaatatttc gcaaaccgca aaatctcctg cagagcgcaa gagggcgcag cgagagaggg
     1921 aaagaaagcg ggaacaaaat ggcgattgtc acggcgcgtc acgatatgtc acgcacatgt
     1981 cacgacgagt cacgacagat aaagatacag ataaagatac agatcaagaa gatcaaaaca
     2041 ctatggtcca tggcgtaaaa aacgccacga accaggcagg ggatgttcag accgtcaatc
     2101 ctggtcagcc agcaggcacg acaccggaag ccgattcagc gtatgcgctg aaagccgatt
     2161 cgggcgctgt gcagcaggcg atgaccgcaa gtccggagca atcacaccaa ctgcagcagc
     2221 ctgaagccga ttccgccatt cagcgggaag ccgatcgggt agtcccggaa aacaccgggc
     2281 agtctgtggg acgagtggat tatccggatg tgttcgaaca ggtctggcgg gagtacccgt
     2341 tgcgtgccgg ggcaaacccg aagaaatccg ctttcagtgc ctggaaggcc agattacgcg
     2401 agggggtgcc accagaggcc atgctggatg gcgtgaggcg ttacgcaaga tacctggcgg
     2461 ctaccgggaa aacgggaacg gaatttgttc agcgagcgac gacgtttttt ggaccggacc
     2521 ggaattttga gaacccctgg ttgctcccgg taagcggcac gaacaaccag cgttgtgtga
     2581 atcatatttc tgaaccggat aacgaaattc cgccgggctt cagggggtaa gtgttaattt
     2641 ctggtcatga ggtaattttc aggagggctt gtggcaaaag tttttacaca agaagagcgg
     2701 gaaaaaatta aagggcaggt tcttgaactc gtacgccaga gtgggcgcga gacgttacga
     2761 caactggaag ctaaaactgg ggcaacaaga tatctgatga gcgttctggc cagagagctg
     2821 gttgccagtg gcgatgtata caactctggt tacgggttat tcccgtctga acaggcgcgt
     2881 aaggactggc aaaatgcccg taaaaagctc tcaagggcaa agctgaagaa accatctgcg
     2941 gttgatccgg accttatctg gtcattacct gacggagaaa tacgtcgcta cgacagtcgc
     3001 ctaaacataa tctgtcgcga gtgccggaag agcgaagtta tgcagcgcat attgtcgttt
     3061 tatcagggta attttcagga ggtgatggcg tgagggtgag agtctatatc gccggtccaa
     3121 tgaccgggta taaaaatttc aaccgtgagg cgtttcacaa tgcggaagag gaactgaaac
     3181 gggaagggca taccgtctta aacccggcag tacttccgga cgggctgaca cagccgcagt
     3241 acatggatat ctgcatggcg atgattcgtt gtgtggatgc gatttacatg ctgaaaggct
     3301 ggcagcggtc agcaggcgct aaggcagaac tggcgctggc ggagaaactg gggcatgcgg
     3361 tgatttttca ggagacagcc agtgtgcaag actaattacc aggcattacg tgaacgttat
     3421 tcaccaattc aggtgccgga atgtcctgtt tgtggcgatg aaatgtcgat acagcgcata
     3481 ttttccagaa cgcatattgt gtatgcctgc acaggtgagg gggatgatgg atattttaaa
     3541 actggtcgaa cttttgcgga tgagcattac ctgaaatcgc gcgtaaccgt cgttgatgtt
     3601 agcgctcctg acgtactggc tttactgaaa gagctggaag ttaaagacaa acgcattgca
     3661 gaattgacag atgcgcttac acaaatgatt aatgcgcaca aaaccacaat tcgttttggt
     3721 catgaacgca taactgaatg tggtggtgat tgcgactcgc cggaaaagat gatttcagaa
     3781 aatccggata tcagaatggc agaggctgtt ttgagagcag gaataaaaac tgaataatta
     3841 aatttagcac agcaaataaa atttaatcct taaccggagg gatttctgca ccctcagaac
     3901 atcaggaggc cg
//
LOCUS       DAJVUK010000239         3906 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.243, whole genome shotgun sequence.
ACCESSION   DAJVUK010000239 DAJVUK010000000
VERSION     DAJVUK010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3906
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.243"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..70
                     /locus_tag="OQQ57_004080"
     CDS             <1..70
                     /locus_tag="OQQ57_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958628.1"
                     /translation="FSKSVELHDKVIGHYLNIKHYQ"
     gene            85..300
                     /locus_tag="OQQ57_004081"
                     /pseudo
     CDS             85..300
                     /locus_tag="OQQ57_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310610.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
     gene            282..1664
                     /gene="torZ"
                     /locus_tag="OQQ57_004082"
                     /pseudo
     CDS             282..1664
                     /gene="torZ"
                     /locus_tag="OQQ57_004082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707760.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine N-oxide reductase TorZ"
     gene            complement(1829..2800)
                     /gene="cmoB"
                     /locus_tag="OQQ57_004083"
     CDS             complement(1829..2800)
                     /gene="cmoB"
                     /locus_tag="OQQ57_004083"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HCS1958629.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRVVDVC
                     VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
     gene            complement(2797..3540)
                     /gene="cmoA"
                     /locus_tag="OQQ57_004084"
     CDS             complement(2797..3540)
                     /gene="cmoA"
                     /locus_tag="OQQ57_004084"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HCS1958630.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MISMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAA"
     gene            complement(3581..>3906)
                     /locus_tag="OQQ57_004085"
     CDS             complement(3581..>3906)
                     /locus_tag="OQQ57_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HCS1958631.1"
                     /translation="RLQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNG
                     AETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL
                     VFSLR"
BASE COUNT         1037 a          968 c         1029 g          872 t
ORIGIN      
        1 gttctcaaaa tcggtggagc tgcatgacaa ggtcatcggg cattatctga acataaaaca
       61 ctatcagtaa gttggagtca ttaccgcata ggcgagctgg ctaccgtgaa tcctggtacc
      121 gatctcaccg tcgttgatgc cagtggcaaa cagccgatcg ttctgttgca gggttatcaa
      181 atgcagggca gtgaaaacac gctctacctg gcggcaggtc aacggctggc gctagccaca
      241 ttaagtgaag aaggtatcaa ggcgctcacg ctaaacgggg aatggcaggc tggggaattc
      301 agcgccagca atatggtgaa cagaaacact ggatgctggt gacgctggcg gcggtgttag
      361 ggcagattgg tacaccgggc ggcggttttg gtttctctta tcattactcc aatggtggca
      421 acccgacacg tgttggcggc gtgctgccgg aaatgtctgc ggcgattgcc ggacaggcca
      481 gcgaggccgc tgatgatggc ggaatgaggg cgattcctgt tgcccgtatc gtcgatgcgc
      541 tggaaaatcc tggcggcaaa tatcagcata acggtaaaga gcaaacgtat ccgaatatca
      601 aaatgatctg gtgggcgggt ggcggtaact ttacccatca ccaggatact aatcgtctga
      661 ttaaagtatg gcagaaaccg gagatgatcg tcgtttctga atgctactgg accgcagctg
      721 ctaaacatgc agatatcgta ttaccgatca ccacatcgtt tgagcgcaat gacttgacga
      781 tgaccggtga ttacagcaac cagcatattg tgccgatgaa gcaggctgtc gctccgcaat
      841 ttgaagcgcg aaacgatttt gatgtgtttg ccgatcttgc ggaattactg aaacctggcg
      901 gaaaagagat ctataccgaa ggtaaagatg aaatggcgtg gctgaaattt ttctatgatg
      961 ccgctcagaa aggtgcccgt gcgcaacgcg tgactatgcc gatgtttaat gccttctggc
     1021 agcaaaataa actgatcgaa atgcgccgca gcgagaagaa cgaacagtac gttcgttatg
     1081 ctgatttccg cgccgatccg gtgaaaaatg cgctgggtac gccaagcggc aaaattgaga
     1141 tttactccaa aacgctggaa aaatttggct ataaggattg cccggcacat ccaacctggc
     1201 ttgcgcctga tgagtggaag ggtaccgccg acgagaagca gttgcagctt ctgaccgcac
     1261 atccggcaca ccgtttacat agtcagctta actatgcgga actgcgtaaa aaatatgcgg
     1321 ttgcagatcg tgaaccaatc actattcata ccgaagatgc tgctcgcttt ggtattgcga
     1381 atggtgatct ggtgcgtgtg tggaacaaac gtggtcagat tctgacaggc gcggtggtga
     1441 ctgacgggat caaaaaaggc gtggtatgcg tgcatgaagg tgcatggcca gatctggaaa
     1501 atggcttgtg taaaaacggc agtgcgaacg tgttaacggc ggatatcccc agctcgcagc
     1561 tggcaaatgc ctgtgccggt aactctgcgc tggtgtatat cgaaaaatat acgggtaacg
     1621 caccgaagtt aacggcattt gataagcctg ctgttcaggc gtaagaagtg aatagcgccc
     1681 ggaaacgggc gctgaggtta tgcaaacgta aaactgcctg atgcgctatg cttatcaggt
     1741 ctacatagtc cctgcaatag attgaattag caagggtttg taggccggat aaggcattca
     1801 cgctgcatcc ggcagtaata ccagaccttt acggcttgcg cgcaatcagc accgcgcgtt
     1861 taggcgcagg ataaccttca actgtcttac tcggatcatg tgggtcgagg aaatcggaca
     1921 gagattcggt aaccatccat tcagtgcgtc gctgctcttc agtagtggta acgcacacat
     1981 ccacaacgcg gatatctaca aaaccacact tcttcagcca gtttttcagc gccagcgcgg
     2041 aagggatgaa atagacatta cgcatttgcg cgtaacgatc gcctggtacc agcaccgtgt
     2101 tctcatcgcc atcaataacc agcgtttcca gcaccagttc accctcattc accagttgat
     2161 ctttcaactg ccagagatgc tccagcggcg aacggcgatg gtaaagcacg cccatcgaaa
     2221 agacggtatc aaaggctttc agtgccggaa gctgttcaat acctaacggt aacaaatgtg
     2281 cgcgctgatc gttacccagt agtttacgca ccgcttcaaa ctggcacaga aacagttgcg
     2341 tagggtcgat ccccaccgcg aggtgcgcgc ctgcgccaat catgcgccac atgtgataac
     2401 cgctgccgca gccgacatcc agaatggtgc gtccggttaa atcagaaaga tggggcagaa
     2461 cacgatccca tttccagtcg gaacgccatt cggtatcgat gttgacgcca tacagtgaga
     2521 acggcccttt gcgccatggc atcaggttcc gcataagcgt ttcaatgcgt ttaatttgcc
     2581 cggtgctcag tggctcttcg ctttcggcgg ttacgctatg caataaatcc agacgatacg
     2641 gtttaatttc aggcagaaat tccaccgcgt tggaccactg cttaaacagc ccgtgctgct
     2701 gctcgcgctg ccagttagca atctgcgcgg gcagcgtttc gagccagtgt gaaagatgat
     2761 ttttggcaat cagagaataa aagttaccaa agtcgatcat gcagcgtcct ctgcttttaa
     2821 tgccaccagt gaaccaaagt taaagcactg gaaccacagc tcgctatgct caaaaccggc
     2881 tttatgcagg cgtgctttat gggtttccac ggaatcggtc agcatcacgt tttccagcat
     2941 gctgcgcttc tggctgatct ccagttcgct gtaaccgttg gcacgtttaa agtcgtggtg
     3001 catgttgaac aacagttcac caactttggc atcttcgaaa ctgaattttt ccgaaagcac
     3061 cagcgcgccg cccgggttca gtccttgata aattttatcc agtaatgcct ggcgctcgga
     3121 aggttccagg aattgcaggg taaaattcag caccaccatc gatgcgtttt caatggcgat
     3181 atcgcgaata tcaccttcaa tgacgtctac tggcgtaggg gctttatagg cgtcaatatg
     3241 acgacggcag cgttcaatca tcgccgggga gttgtcgatg gcaataattt tgcaattatc
     3301 atgatgaatg ttgcgacgca ccgagagcgt cgccgcgccc agagaacaac ccagatcgta
     3361 aacctgcgta ccaggttgaa cgaagcgctc ggctaacata ctaatcatgg aaataatatt
     3421 ggaatagccg ggaacggaac gctggatcat atccgggaag acttcagcta cccgttcatc
     3481 aaaggtccag tcgcccagtc tggcgatagg ggcagaaaat agcgtgtcgc ggtgagacat
     3541 aacgtaaaaa tccgggaaaa agaaagtggc gtattgtgcg ctaacgcagg gagaaaacca
     3601 actcccaggg catataccaa agattcgcca gcaccatcag caacagcgca caccaggtgg
     3661 cgctcatgcc ggaacgtcgc cagcgaaaca gacggtgatg aaaaccgtaa taatgcatca
     3721 gacgaccagc aagcaaaacg atgccgcaaa tatgcaccat ccaggtttct gcgccattca
     3781 tttccataaa cagcatcagc acaatcgcga tgggaatata ttccaccgcg ttaccatgaa
     3841 tgcgaatagc gctttgcagt tcgctaaaac caccgtcacc ataggcaacg cggtactgca
     3901 aacgca
//
LOCUS       DAJVUK010000240         3853 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.244, whole genome shotgun sequence.
ACCESSION   DAJVUK010000240 DAJVUK010000000
VERSION     DAJVUK010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3853
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.244"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..410
                     /locus_tag="OQQ57_004086"
     CDS             <1..410
                     /locus_tag="OQQ57_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1958632.1"
                     /translation="FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR
                     ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIA
                     EGVESEDVARELIKLGCVQAQGYLYQKPMPFSA"
     gene            448..1776
                     /locus_tag="OQQ57_004087"
     CDS             448..1776
                     /locus_tag="OQQ57_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1958633.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGSYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKIYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(1823..3148)
                     /gene="rimO"
                     /locus_tag="OQQ57_004088"
     CDS             complement(1823..3148)
                     /gene="rimO"
                     /locus_tag="OQQ57_004088"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HCS1958634.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            3361..3744
                     /gene="bssR"
                     /locus_tag="OQQ57_004089"
     CDS             3361..3744
                     /gene="bssR"
                     /locus_tag="OQQ57_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HCS1958635.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
BASE COUNT         1007 a          857 c          950 g         1039 t
ORIGIN      
        1 gttttaccac catcatgaaa gaaaatggcc tgaaggcgaa cagcctctgt gttgagatca
       61 ctgaaaccgt gatcgagcga attaatgaac atttttatct caatattgaa caactgcgta
      121 aacaaggggt acggatatcg attgatgact ttggcaccgg tttgtcaaac ctgaaacgtt
      181 tttatgaaat taatccagac agcataaagg tggactcgca atttaccggc gatattttcg
      241 gtactgcggg aaaaattgtg cgcattattt tcgatctggc acgctataac cggatcccgg
      301 tgattgcgga aggcgtagag agcgaagacg ttgcacgcga attaattaaa ttaggatgtg
      361 ttcaggctca ggggtatctg taccagaaac ctatgccatt ctccgcctag gataaaagtg
      421 gaaaattagt aaaagagtag tttacgtatg tccagaatca ataagttcgt acttacagtc
      481 agtctgctga tttttatcat gatttcagca gttgcctgcg ggatctacac tcaaatggta
      541 aaggaacggg tgtatagcct gaaacagtcc gttattgata ctgcttttgc ggtggcaaat
      601 attgctgaat atcggcgtag cgtggcaatt gatcttatca acacgctaaa tcccactgag
      661 gaacagctgt tggttggttt gcgcacagct tacgccgact cggtttcccc ctcttatttg
      721 tacgatgtcg gtccttatct gatttccagt gacgaatgta ttcaggtaaa ggagttcgag
      781 aaaaattatt gtgcagatat tatgcaggtt gtgaagtatc gacatgtcaa aaatacaggg
      841 tttatctctt ttgacggtaa aaccttcgtc tattacctct atccggtaac tcacaatcgt
      901 agtctgatat ttttgcttgg tctggagcgt ttttctttac tgtcaaaatc gctggcgatg
      961 gacagcgaga acctgatgtt ctctctattt aagaacggta aaccggtgac cggtgatgaa
     1021 tataatgcta aaaacgccat cttcaccgtt tcggaagcga tggagcactt cgcctatttg
     1081 ccgaccggat tgtacgtatt tgcgtataaa aaagatgttt atttgcgggt ctgtacattg
     1141 attattttct ttgccgcatt ggtggctgtg atatcgggtg ccagttgcct ctatctggta
     1201 cgcagagtga ttaatcgtgg tattgtggag aaagaagcca tcattaataa ccattttgaa
     1261 cgcgtactgg atggcgggct tttcttttcg gctgccgatg tcaaaaaact ctacagtatg
     1321 tataactcgg cgttcctgga cgacctgacc aaagcaatgg gcagaaaatc ctttgacgaa
     1381 gatttaaaag cgctgccgga aaaaggcagt tatttgtgcc tgtttgacgt cgataaattc
     1441 aaaaacatta acgacacctt cggtcatttg ctgggcgatg aagtgttgat gaaagtggtg
     1501 aaaatcctta aatcacagat cccggtagat aaaggtaaaa tctaccgctt cggcggtgac
     1561 gaatttgcgg tgatttatac gggtggaacg ctggaagagt tgctatcgat tctaaaagaa
     1621 atcgttcatt tccaggtggg aagcattaat ttaagtacca gtatcggtgt agcgcattca
     1681 aatgaatgta ccaccgtcga acgcttgaaa atgctggcgg atgagcggct gtataagagt
     1741 aagaaaaacg gcagggctca gattagctgg cagtaatcat tattcgcagg ccggacaaat
     1801 gattttgccc ggcctgaatt aattaaaccc ggctacccca caaatcgtac tcatcggcgt
     1861 gctcgacttt cacacgcagg atatcacccg gcttaacgtt ggtttcacca ttgagataaa
     1921 ccgcgccgtc gatttccggt gcatctgcca tgctgcgacc aatcgcgcct tcttcgtcca
     1981 cttcgtcgat aatcaccaga atttcacggc ccactttctc ttgcaggcgc tcggcggaaa
     2041 tctgctgctg cagctgcatg aaacggttcc agcgttcttc tttaacttct tccggaacct
     2101 ggtcaggcag ggcattggcg tctgcacctt caaccgggct gtatttaaag cagccaacgc
     2161 gatccagacg cgcttctttc aggaagtcga gtagcatctg gaaatcttct tctgtctcgc
     2221 cagggaagcc gacaataaag gttgagcgta gggtcagttc cgggcagatt tcgcgccact
     2281 gtttgatgcg cgccagttgg cgatctacag aacccggacg cttcatcagt ttgagaatgc
     2341 gcgggctggc gtgctgcaac ggaatgtcca gatacggcag gattttgcct tctgccatca
     2401 gtgggatgac gtcgtccaca tgcggataag ggtaaacgta gtgcagacgt gtccagatcc
     2461 ccagtttcga taactgttcg cacaggctga ccatgctggt ttttaccggc tcgccgttgt
     2521 ggaagccagt acgatgttta acatcaacgc cataggcgga agtatcctgc gagatcacca
     2581 gaatctcttt aacgcccgca tctaccagac gtttcgcttc acttaacact tcgccaatcg
     2641 gacggctcac caggtcgccg cgcatagacg gaataatgca gaaggtgcag cggtgattac
     2701 agccttccga aattttcaga taggcataat gacgcggcgt cagtttcaca ccttgttctg
     2761 gcaccaggct caggaatggg ttgtgtttcg gttttggcac gtagtgatga acgtgctcca
     2821 gaacctgctc atagctatga ggcccggtga tttccagcac tttcgggtgg acttcgcgga
     2881 tctgatcttc ttttgccccc agacaaccgg tcacaattac cttgccgttt tcattcaacg
     2941 cttcaccaat ggcttccagt gattcttgta ccgcgctgtc aataaagccg caggtgttga
     3001 cgatcaccat gtccgcatcg tcatagctcg gtaccacgtc ataaccttca gtgcggagtt
     3061 cggtgagaat acgctctgaa tcgacaaggt ttttcggaca gccaagggaa acaaagccga
     3121 ttttcggctg gggagttact ttgctcatag cttaaaaaat attcagttac aggaaaggtc
     3181 agggcaggga ttctacagag ttctggataa aatttgtatc gcaatctcat tcgctggcgg
     3241 aggcgaagga aatgtaaatt ttgttaattc ggcgtgaaga attgatcctg gacagcattt
     3301 tgctcaaaaa atagccatac tatttaattg caacaaggct ggaaagagga ggatcgaagt
     3361 atgttcgttg acagacagcg aatcgatctg ctgaaccggt tgatcgacgc acgcgttgac
     3421 ctcgctgcat acgtgcaact gaggaaggca aaaggataca tgtccgtcag cgaaagcaat
     3481 catctacgag ataacttttt taaactgaat cgcgaactgc acgataaatc gctgcggttg
     3541 aatcttcatc tggatcagga agagtggagt gctcttcatc atgctgaaga agcattagcg
     3601 acagccgcag tatgtttgat gagtgggcac catgattgcc cgactgttat taccgtcaac
     3661 gccgataagc ttgaaaattg tctgatgagc ttaacgctga gtatccagag cctgcagaag
     3721 cacgccatgc ttgagaaggc ctgaaaacta agggggagaa agcgtctccc ccttcatgtt
     3781 taagtttttg taaaaatgaa tttgttatct cctccactga ctacgcttta agccagagtc
     3841 aatccggagg cgt
//
LOCUS       DAJVUK010000241         3737 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.245, whole genome shotgun sequence.
ACCESSION   DAJVUK010000241 DAJVUK010000000
VERSION     DAJVUK010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.245"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..860)
                     /locus_tag="OQQ57_004090"
     CDS             complement(<1..860)
                     /locus_tag="OQQ57_004090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000094541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HCS1958636.1"
                     /translation="MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPI
                     ADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNG
                     IPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS
                     IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQL
                     NDQMKMPWVILSSGVDADIFGRAVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDV
                     SVPRLQRLAE"
     gene            complement(885..1763)
                     /gene="yihU"
                     /locus_tag="OQQ57_004091"
     CDS             complement(885..1763)
                     /gene="yihU"
                     /locus_tag="OQQ57_004091"
                     /EC_number="1.1.1.373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001318159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
                     /protein_id="HCS1958637.1"
                     /translation="MATIAFLGLGQMGSPMANNLLQKGHSLQVFDVNAQAVDALVTQG
                     ATAAQTQAEAAAGAEFIITMLPNGDIVRQVLLGEKGVCEAVSSDALLIDMSTIHPLQT
                     DALIRELQEKGISMMDAPVGRTSVNAIDGTLLILAGGTDEQIARARPILMCMGNELVE
                     AGGPGMGIRVKLINNYMSIALNALSSEAAVLCESLGLNLDVAIKVMSGTAAGKGHFTT
                     TWPGKVLKGDLSPAFMVDLALKDLRIAVDVARETGTPLNMGIAAESYYAAASQDGKGR
                     QDWSALLNQVRQQAGL"
     gene            1936..2832
                     /locus_tag="OQQ57_004092"
     CDS             1936..2832
                     /locus_tag="OQQ57_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000196715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1958638.1"
                     /translation="MTRIACVGITVQDRIYSLPTLPEGGGKYQANHYLEIGGGPAATA
                     AVAIAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQH
                     GERIIVNYPSPDLGTDAEWLEAIDFSRYNLILADVRWHSGTEKAFSLARLAGVTTLLD
                     ADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGS
                     LWIEDGHLCQQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCT
                     QPGGRAGIPNREQTESFLSLYA"
     gene            2872..3660
                     /locus_tag="OQQ57_004093"
     CDS             2872..3660
                     /locus_tag="OQQ57_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1958639.1"
                     /translation="MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFI
                     TIGTTVEAVARALLNRRDLRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPG
                     AVDFIEGFRADYLITSIGAIEHDGTLLEFDLNEALVARTMIKHARNTLLVADHTKFAA
                     SAAVSIGNARNVRAFFTDAPPPNSFCQLLSEENVELVVAEQEVS"
BASE COUNT          962 a          955 c          902 g          918 t
ORIGIN      
        1 atttctgcca accgttgtaa acgaggaaca gagacatcgc gcagcatagt ttgtggatct
       61 tgtgcaccaa caaccgacgc ccaaaccgct cgtccagcca ggaagcccga cgcaccacct
      121 ttcatggcaa tacttactgc acggccaaaa atatcggcat caacgccaga agaaagaatt
      181 acccacggca tcttcatctg atcgttaagt tgctgacagg cggcaagtaa ggttttttca
      241 tcgcctttgc cccctaatgg catctcggct ttgtaaagat cagcctctgt tccaccaagc
      301 tctgcggcgg cggcaacaat ggcgctttca cgatcaaagt cccaaccgcg acgaggtgga
      361 cgcaccacag gttcaataat gctcaccagc ccggcactac ggcagcgacg aacaaattta
      421 tcaaccattg ccagacgttc ctctgcgggt tcatcttcac gccagagtac aagtaatttc
      481 attgccttag cccccatttc acgggcttta tgcgggtcga cggacatatc tatttcaacg
      541 ctatcaaccg ggatgccatt acctgggata aaaagatcgg cagcgacaat caggccgcaa
      601 gaattagcaa cagcgccctg ctcgactatt tgctcaagac aaaattgttt atccgccaga
      661 acggcagaag cataaggaga aaggattcgg gtcgcggcaa ctttaaaatc ggtgagtaca
      721 ctgtcggcga tgggttttgg ctgccctgct gccgcaaaca tcaagcgcat ggcctcacgc
      781 tgatcgacag ctaacatggc aaatccacca cctgggcggg agatatcttt cagcgtaaat
      841 ggggtgaagt gggatgacat agaaactcct gttaatagat aaaattaaag accagcctgc
      901 tggcgaacct gatttagcag ggcactccag tcctgccgcc ctttgccgtc ttgacttgct
      961 gcagcgtaat aactttctgc tgcaatcccc atattgagcg gtgtccccgt ctcccgagcg
     1021 acgtcaactg caatacgcag atctttcaac gccagatcca ccatgaaggc gggtgaaaga
     1081 tcgcctttca gcactttgcc aggccaggtg gtcgtaaaat gtcctttccc tgctgccgta
     1141 ccactcatca ccttaattgc gacatcaaga tttaatccca gtgactcaca taacacagcg
     1201 gcctcggagg acagcgcatt aagcgcaatg ctcatatagt tgttaattag cttcacgcgg
     1261 atccccattc ctgggccgcc agcctcgacc agctcattac ccatgcacat aagaatcggg
     1321 cgtgcacgtg caatctgctc atcagtgcca cccgctaaaa tcagcaatgt gccatcaatc
     1381 gcattcacgg acgttctgcc cacgggagcg tccatcatac tgatgccttt ttcttgtaac
     1441 tcccgtatta atgcatcggt ctgtaaggga tgaatagtcg acatatcaat caataacgcg
     1501 tcagatgaaa cagcctcaca gacgcctttt tcccccaaca gaacctgtcg aacaatgtca
     1561 ccattgggaa gcatagtgat gataaattca gcgcctgctg ctgcttccgc ttgggtttgt
     1621 gccgcagtgg ccccctgcgt aactagcgca tcgacggcct gtgcattgac atcaaatacc
     1681 tgcaatgaat gccctttttg caatagattg ttagccattg ggctacccat ctgccccagc
     1741 ccgagaaatg caatggttgc catgaatact ctcctgtctg acattgacaa aataatgaca
     1801 attgaaaatt cgtttttgtc tgtttttgag catatttgtg atttatgttc aaaaacacga
     1861 cacgcatcac taatttgatc atttgcgtca tttaaattga ccaaagacga caaaattaaa
     1921 caggacaaga caaatatgac cagaattgca tgcgtgggta tcacagttca ggacagaatt
     1981 tattctttgc ccactctgcc ggagggcggc gggaaatatc aggcaaatca ttatcttgag
     2041 attggtggcg gcccggcagc aacagccgct gttgcaatcg caaagcttgg cgtggaggtt
     2101 gatttcatcg gtcgcgtcgg cgatgacagt tgtggaaata ccttacttgc agaacttgag
     2161 ggttggggcg tcaataccgc attttgccgc cgatatccta acgcccgttc gtcgcaatca
     2221 gcgatcctcg ttgatcagca tggcgaacgg attatcgtta attatccaag tcctgatctc
     2281 ggtactgatg ccgaatggtt agaagcgatc gatttctctc gttataatct gattctggcc
     2341 gatgttcgct ggcatagcgg tactgaaaaa gcattctcgc tagcgcgcct tgcgggtgtg
     2401 acaacgcttt tagacgccga tatgacaccg caggatattt ctccacttgt cgcgcttgcc
     2461 gatcacgccg tgttctcaac accagggctg aaacgcatga ctggcctgca gtctcctgaa
     2521 gaaggtttgt tccaggcaac gacacaaaca gcaggtaaag tgtatgttac gctgggttct
     2581 gaaggatcgt tgtggattga agatggtcat ttgtgtcaac aggaggcatt ttctgtcaat
     2641 gtggttgata ccactggagc aggcgatgtt tttcacggcg cactcgcggt agcgttggca
     2701 gaaaaaatgc caacaaaaga ggctattcgt tttgccagtg cggttgccgc gatgaaatgt
     2761 acccagcctg gcggtcgggc cggcattcct aatcgtgagc aaaccgaatc atttttgtca
     2821 ctttatgcgt aaaatggtaa acatctaccg aggaggggca agggagtatt catgagtatc
     2881 atcgaagtga caggtaatcc acgccatgac caactcgttc atctaatcgc agaacgcggt
     2941 tatatgaata ttgaagaact ggcacaactg ctggatgttt caacgcaaac cgtgcgccgg
     3001 gatatccgaa aactcagtga gcagggcttg atcacccgtc atcatggagg ggccgggcgc
     3061 gtctccagcg tcatgaatac cgcttttgag caacgggaac tttcgctcac cgccgagaaa
     3121 cgggcgatcg ctgaggcagt cgccgattac cttcccgaac gctgtaccgt ctttatcacc
     3181 atcggtacaa ccgtagaagc cgttgccagg gcattactca accggcgtga tttacgcatt
     3241 atcactaaca gcctacgtgt ggcacagatt ctttataaga atcaggatat tgaagtgatg
     3301 gtgccgggag gcactttacg cgctcataac ggcgggatta tcggcccagg agccgtggat
     3361 tttattgaag gcttccgcgc agattattta atcaccagta taggtgccat tgaacatgac
     3421 ggcaccctac tggaatttga tctaaatgaa gcgttagtcg cgagaacgat gattaaacat
     3481 gcgcggaata cattgttagt ggccgatcat acgaagtttg ccgcgtctgc tgccgtttca
     3541 attggcaatg cacggaatgt cagggctttt tttactgatg ccccgcctcc caattctttc
     3601 tgccagttgt taagtgaaga gaatgttgaa ctggtggttg ccgagcaaga agtatcctga
     3661 aattgaaatt tcggaaaatc cgctgggaat ttcagcggat tttgttttcc ataagcaaaa
     3721 aaaacctgcc agcgatg
//
LOCUS       DAJVUK010000242         3733 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.246, whole genome shotgun sequence.
ACCESSION   DAJVUK010000242 DAJVUK010000000
VERSION     DAJVUK010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.246"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(123..2192)
                     /gene="glyS"
                     /locus_tag="OQQ57_004094"
     CDS             complement(123..2192)
                     /gene="glyS"
                     /locus_tag="OQQ57_004094"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HCS1958640.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYACHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2202..3113)
                     /gene="glyQ"
                     /locus_tag="OQQ57_004095"
     CDS             complement(2202..3113)
                     /gene="glyQ"
                     /locus_tag="OQQ57_004095"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HCS1958641.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3208..3507)
                     /locus_tag="OQQ57_004096"
     CDS             complement(3208..3507)
                     /locus_tag="OQQ57_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsaB family lipoprotein"
                     /protein_id="HCS1958642.1"
                     /translation="MMMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALC
                     KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
BASE COUNT          866 a         1007 c          959 g          901 t
ORIGIN      
        1 aatctcataa aattaatata tgagataatc tttattcagc agaagattat taaaggttgc
       61 tgtattattt agcgataata aaaaaagcct gccagatggc aggcttttta ataacggcgt
      121 tattactgca acagcgaaat atccgcaacg cgcaggaaca gttcgcgcag tttctccagc
      181 atggtcagac ggttgagacg caattctttg tcatcaacca tgaccatcac tttatcgaag
      241 aaagcatcaa ccggctcacg cagctctgcc agttcgacca gcgcatcctg gtaacgacct
      301 tccgcaaagt acggctccag cttgtcacgt agcaccacaa cctgcatcgc cagtttaatt
      361 tcttccggct ctttcagggt agaggcattc acgcggtcgc tcagcacttc gtcagatttc
      421 gccagaatgt tagatacacg tttgttcgcc gccgccagtg cagcagctgc atccagggta
      481 cggaaatgcg ataccgcttt catacgggca tcgaaatcag ccggacgagt cggacgacgc
      541 gccagtaccg cctggatggt gtcaacggtg taaccttcgt cctgatacca ggcgcggaag
      601 cgaccgagca taaagtcgat aacatcatca accacgttgg cgttagtcag cttatcgcca
      661 tacagacgca ctgcttcttc ggtcagcgtt tgcagatcaa ggttgaggtt cttctcaacg
      721 ataattcgca gcacgccaag tgcggcacga cgcagcgcaa acgggtcttt gtcgcctttc
      781 ggatgctgac cgataccgaa gatacccgcc agagtatcca tcttatcagc aatcgccagc
      841 gcacaagcta ccgggttgga cggcaggtca tcaccggcaa agcgcggctg atactgctca
      901 ttcagcgcga cggctacgtc ttccgcttcg ccatcgtgac acgcgtagtg catccccata
      961 acgccttggg tgtcggtgaa ctcgaagacc atgttggtca tcaggtcaca cttagacagc
     1021 aggcccgcac gggttgcgtg gttaacgtca gcgccaatct gttcagcaat ccagccagcc
     1081 agcgcctgga tgcggtcagt tttgtcacgc agcgtaccca gctgttgctg gaacagcacg
     1141 gtttgcaggc gcggcaggtt atcttccaga cgttttttac ggtcggtatt gaagaagaac
     1201 tcggcatccg ccagacgtgg acgaacgact ttctcgttac cagagataat ttgctgcgga
     1261 tctttcgatt cgatgttggc aacgaagatg aagttcggca gcagtttgcc atcgttcgca
     1321 tacaccggga agtatttctg gtcacctttc atggtgtaaa ccagggcttc agccggcacc
     1381 gcgaggaatt tctcttcgaa ttttgcggtc agaacgaccg gccactccac cagcgaagcc
     1441 acttcttcca gcaggctttc gcttaagtca gcgttaccgc caatcttacg cgctgcttct
     1501 tcggcatcgg ctttaatctt cgctttacgt tcttcgtaat cggcgatgac tttcccgcgc
     1561 tcacgcagaa tttccggata ctgatcggcg ttgtcgatgg tgaattccgg ttcgcccata
     1621 aagcggtggc cgcgaatcac gcgatcggac tgaatgccca gaatagttgc cggaatgact
     1681 ttgtcgccca gcagcagggt cacggtgtgc accggacgca cgaagtgcac gtcgcttgcg
     1741 ccccaacgca tcagtttcgg gatcggcagt ttcgccagag aagtcgcaac catattcggc
     1801 agcagtgctt cggtgctttc gcccttcaca tgggcgcgat acagcagcca ttcgccttta
     1861 tcggtagtca gacgctcagc ctggtcaacg gtaataccgc aaccacgcgc ccaaccttct
     1921 gccgctttgc tcggtttgcc ttcagcgtcg aacgcctggg caatcgccgg gccgcgtttt
     1981 tcgatttcac gatccggttg cgcttccgcc aggttagcta ctttcagcgc cagacgacgc
     2041 ggagcagcaa accattgaac ggtgccgtgt gcgaggccag cgttatccag ctccacagta
     2101 aaattcgcag caaaggactc aaccaggctg cgcagtgctt ttggtggcag ctcttcagtg
     2161 ccgatttcca ccagaaaagt tttctcagac atagccgcct cttacttatc tttgttgcac
     2221 atcgggaagc cgagggcttc acgggaagcg tagtatgctt ctgccactgc tttggtcagg
     2281 gtgcgaatgc gcagaatgta gcgctgacgc tcggtgacgg agatggcttt acgcgcatcc
     2341 agcaggttga agctgtgggc ggctttcaga atacgctcgt aggctggcag cggcagcgga
     2401 ttttccagcg ccagcagctg ctgcgcttct ttctcgtact gctcaaagca ggtgaacagg
     2461 aagtccacat ccgcgtattc gaagttgtaa gtggactgct ccacttcgtt ctgatggaac
     2521 acgtcgccgt aggtggtttt acccagcggg ccgtcgctcc agaccaggtc gtaaacgctg
     2581 tctacgccct gaatgtacat ggccagacgt tccagaccgt aggtgatctc gccggtaacc
     2641 ggtttacact ccagaccacc aacctgctgg aagtaagtga actgcgtcac ttccatgccg
     2701 tttagccaca cttcccagcc cagtccccag gcacccagag tcgggttttc ccagttatct
     2761 tccacgaaac ggatgtcgtg aatagtcggg tccatgccca gctctttcag agaaccgagg
     2821 tacagctcct gaatattgtc cggcgatggc ttaatgacca cctggaactg atagtagtgc
     2881 tgtaaacggt tggggttttc gccgtagcga ccatcggtcg ggcgacgaga aggctgaaca
     2941 taagcagccg ccatcggttc tggccccagc gcgcgcagac aggtcattgg gtgagaggtt
     3001 cccgcgccga cttccatgtc caatggttga acaatggtgc agccctggcg agcccagtaa
     3061 tcctgtaagg tcaggatcaa gccctggaag gtcctggtat caaacttttg catattattt
     3121 cgtgctggat acgtgtggat ttaaaggaag ggatcagtat acccgctgga tggaagatat
     3181 acagtacgaa acgggaaaaa gcagggctta acgcatggaa agatgcaaaa aatggccatc
     3241 tgcgtcaaaa gaacagacaa actgctcttt acggaaggta taaccgcgca tttcatagct
     3301 tccctggaac tgttcgaagg cggtgacgtc gattttttgc tcgccggtgt tataacgttt
     3361 tgccgcctga tccttgcata acgcttccat attcaacgaa cgcagaggat caacctttac
     3421 ccgttgtgct ttctgcacgg gtgacggtgt agaacaaccc actagcacca taagcgccat
     3481 tgccggaaag aaagcgttca tcatcattaa attaccgtct ggtttgcagg tgagtcttat
     3541 tatttatatc ggtatagtgg ctgatatctt acgaatttcc ttaagcctct ataagctgta
     3601 gtgataaaac tcagattatt ccagtgcgcc aaccaaatga tttatcggtc agactttttt
     3661 taaccagata cagagacaca gatgcaggta atgctgccaa cttactgatt tagtgtatga
     3721 tggtgatttt aag
//
LOCUS       DAJVUK010000243         3723 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.247, whole genome shotgun sequence.
ACCESSION   DAJVUK010000243 DAJVUK010000000
VERSION     DAJVUK010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.247"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            37..264
                     /locus_tag="OQQ57_004097"
     CDS             37..264
                     /locus_tag="OQQ57_004097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HCS1958643.1"
                     /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS
                     AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE"
     gene            complement(265..639)
                     /locus_tag="OQQ57_004098"
     CDS             complement(265..639)
                     /locus_tag="OQQ57_004098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309456.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HCS1958644.1"
                     /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD
                     GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRAAADEWDER"
     gene            complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="OQQ57_004099"
                     /pseudo
     CDS             complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="OQQ57_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtG"
     gene            complement(2118..3038)
                     /gene="lpxL"
                     /locus_tag="OQQ57_004100"
     CDS             complement(2118..3038)
                     /gene="lpxL"
                     /locus_tag="OQQ57_004100"
                     /EC_number="2.3.1.241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) lauroyltransferase"
                     /protein_id="HCS1958645.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            3263..3723
                     /locus_tag="OQQ57_004101"
                     /pseudo
     CDS             3263..3723
                     /locus_tag="OQQ57_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415573.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
BASE COUNT          915 a          951 c          945 g          912 t
ORIGIN      
        1 cgttatgccg gtattttttt acggaagagg tatcaaatgc gtttaattgt ggtgagcatc
       61 atggtgacct tgctgagtgg ctgtggcagc attattagtc gcactatacc ggggcagggg
      121 catggcaacc aatattatcc cggtgtgcaa tgggatgtgc gtgactccgc ctggcgttat
      181 gtcacaatcc ttgatctgcc attctccctg gtttttgata ctttactgct gccgatcgac
      241 attcatcatg gcccgtatga gtgattaacg ttcatcccac tcatcagctg ctgcgcgtcc
      301 ttcctcggta tccagcggtg gctcaagctg aaattccccc tcgtcccatt catgtaatgt
      361 attctcttcc tgccactcct ggcgtatctc tatctcatca tagtcgccat caaaaacact
      421 ttgcgcggct tcaccgctaa gcataggtaa acattcacct tcttcccctt cgtcggcaaa
      481 aaactcaact tgccacatga tgtcgccgtc ctgcaaaacg tatttttggg cattgaactg
      541 ttgcacattc gcatcttcgg cgtcgatgcc ggggttgtct gcaagaaatt cttcgcgtgc
      601 agcgtcaatg gcttcttcaa gcgttgcgta catggtcatc acgattctcc ctttgagttg
      661 atgaggtttc agggaaaagg atagctgatt ctccgctttt gcaagtatga aaggcgaaaa
      721 atcagttcga tacctggggt attcgacgac gacgtagact gttccatgaa tagactgcgt
      781 tgaataacac tacgccagcg gtgacgagaa ataccgctct gaaaccgtag ttcgctgaaa
      841 tcgctgctcc catcaatggt ccggtaacgt tgccaatatc acgaaacgat tggttatagc
      901 tgaagatacg cccggcgatc tggttgctcg agttgtaaac caacaatgtc tgtacggcgg
      961 ggagtagtgc accatcggcg gcaccgagca aaaaacgtaa aatcccaagt tgcaatggcg
     1021 tctgaacgta agacattggg atcaacagca gtacagaaaa gatcagcgct gtaatcagga
     1081 tcttttcggg tccgattcga tcgccaagtt tgccgagtcg tggtgcactt agcagagccg
     1141 ccacgcctgg caccgaggcg atcatgccac tgataaaggc gacgttactg acgttacccg
     1201 ccagttcgcg gacatacagc gtcagaatgg gggcaattga gcccgtcgcc acctggatga
     1261 ttaacgtagt gacaaacagg ctgagtacca gtttcgggtt tttaagtgat gtcaccactt
     1321 cccgcatgtg cagcatctct tttttgctga ccggctggaa tttttctctg atgcaaaaca
     1381 gggtgacgaa aaagcagagt atgagcacac tggtggtaat aaagaatacc ggacgtaagc
     1441 cgtagctatc ggcgagcagg ccgccagcca ttgggccgag caacgcacca ccaacgccgc
     1501 ctgtggagag cgtacccagc gcccagccgc ttttattacg cggtacttgt gtggcgataa
     1561 gagcattagc gttggggaca aatccgccaa gtaacccaag aagcgcccgc aggatcaaaa
     1621 actgccagat attttgtgcc agccccatca acaccatcac gatgcccatg ccgagggcag
     1681 agcgtaatag catgagtttt cggcctttac ggtcggcgag tccaccccaa aacggtgagg
     1741 tgatggccga aaataaaaat gtaatgctga agacaatacc ggaccatatt cagggcggag
     1801 tgaccggtaa cgccaagctg ctcaacgtag aggggtaaga agggcattac cagactgaag
     1861 gcggcaccgg taagaaaaca gcctagccag gcgacgatca ggtttcgttt ccagtttata
     1921 ggggtgtcat tttcacaggg tgacatagca atccgctgtt ggtgcgccag gcgcggtgaa
     1981 cataagaaga aaagataagc acactaatta tgcgcccgac ttccaggggg cgcaatccag
     2041 agagctttta tcgctaaatc agggggattt gctgtggtaa tgccggatgc cattctgaag
     2101 catccggcag gggagattta atagcgtgaa ggaacgcctt ccgggcgtgt tttaaagcga
     2161 cggtgtaacc acatatactg ctctggtgcc atcatgatgc atttttcgac cactttgttc
     2221 atccacgcgg cggtagtttc ggcatcatcc agtggcggag aacactctgg cggcagcata
     2281 atcaattgat accctttgcc atctggctta cggcgtggaa cgaagggcac cagacatgcg
     2341 ccggacatcc gtgccagcat ccaggttccg gtcgtggtcg cagcctgctc aacggcaaat
     2401 aacgggacga aaacgcttga gcgcgggccg taatcatgat ccggtgcgta ccagaccact
     2461 tcgccttttt tcagggcttt aatcatgcct tttaaatctt tgcggtcgag catcgattta
     2521 tttgagcgca aacggcccca ggtttgtagc cagtcaatca gtggattatc gttcgggcgg
     2581 taaacgccaa tccccggttc ctgcatacca aactgccgcg cacccagctc cagtgtcaga
     2641 aaatggatgc caactaacag gatgccgcgt ttttgcgcct gcacgtcacg aatgtgttcc
     2701 atgccgatca cttccgtcca gcgcgcgatt cggcggtccg gccagaacca cgccatgccg
     2761 gtttccatca ggcccatgcc aacggattcg aaattcttca ccaccatttt acggcgttct
     2821 tgttcgctca tttccgggaa gcacagttcc aggttgcgat gcacaatttt tgcgcgtcgt
     2881 ttcataaaac gtaacgccag ttttcctaat ccacaaccga ggcggtagat aaccgggtag
     2941 ggcaattgca cgactaacca aagtacgcca atacccaacc aggttaacca ataacgcgga
     3001 tgaagcagtg cggtggagaa cttgggtaga ttcgtcatat caatcctgtt tttcaaccta
     3061 ttcgggcaat tgtatgtatt gtcgcatttt ttcgcccgca accaaaattt gtggctgaag
     3121 actgggcgaa attgccgcgc ttgtaaataa caaataattt ttaatgcgca aatgtagcgt
     3181 aaaatgtgtg gatgttaatt atcgataatt gctatatcat gccgcggatt tttactttcc
     3241 catctcgcag gaaccgtaca ccatgccagt gttacacaac cgcatttcca acgacgcgct
     3301 aaaagccaaa atgttggctg agagcgaacc gcgaaccacc atttcgtttt acaagtattt
     3361 ccacatcgcc gatcctaagg cgacccgtga cgctttatat cagctgttta ccgcgctgaa
     3421 tgtttttggg cgagtgtatc tggcgcatga gggcattaac gcgcaaatca gcgtacctgc
     3481 gagcaatgtt gaaacatttc gcgcgcagct ctgccttcga cccggcttta gagggtttac
     3541 gcctgaatat cgcgttggat gatgacggga aatccttctg ggtactgcgc atgaaggtac
     3601 gtgatcgcat tgttgccgac ggtattgacg atcctcactt tgatgccagc aatgttggtg
     3661 agtatctgca agcggcggaa gtgaacgcca tgcttgacga tcccgatgca ctatttatcg
     3721 aca
//
LOCUS       DAJVUK010000244         3685 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.248, whole genome shotgun sequence.
ACCESSION   DAJVUK010000244 DAJVUK010000000
VERSION     DAJVUK010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.248"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(279..566)
                     /locus_tag="OQQ57_004102"
     CDS             complement(279..566)
                     /locus_tag="OQQ57_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebO family protein"
                     /protein_id="HCS1958646.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTIESQKSVDDEDIIRLVAER"
     gene            complement(641..784)
                     /gene="mgrB"
                     /locus_tag="OQQ57_004103"
     CDS             complement(641..784)
                     /gene="mgrB"
                     /locus_tag="OQQ57_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HCS1958647.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            943..1182
                     /locus_tag="OQQ57_004104"
     CDS             943..1182
                     /locus_tag="OQQ57_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958648.1"
                     /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
                     ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG"
     gene            complement(1325..2116)
                     /gene="kdgR"
                     /locus_tag="OQQ57_004105"
     CDS             complement(1325..2116)
                     /gene="kdgR"
                     /locus_tag="OQQ57_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HCS1958649.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            2293..3666
                     /locus_tag="OQQ57_004106"
     CDS             2293..3666
                     /locus_tag="OQQ57_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958650.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVMLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
BASE COUNT          924 a          904 c          815 g         1042 t
ORIGIN      
        1 taaaataaga aaaattgatg aatgagcaaa aaaatcaaga gagaaacgtt tcgctaataa
       61 ataataccac gcttaatcac aaatccgatg taaacatcct aataaattaa tgaggaaaat
      121 atctttttct gatatcccgt tacgcaaata aataatatga taattatttg aagtcagacc
      181 agagttttaa tttgaagcag ttgcaccatg acagtgcgta taatcaggat gaattgagta
      241 acccttcaac gacggggtta ctcaagattg aggaaggatt atcgttcggc gaccaggcga
      301 ataatatctt cgtcatcaac cgatttttga ctctcaatgg tctttttatc tgctttctct
      361 ggttcgtttg cttcgcacaa acgacgtaac agtgcatttt gacgtttttg ctgatccagc
      421 aacgcctcaa gcagttcaat ctgttcgtta gtccgtgaac tggcacgatt gataaaaaac
      481 cacaagatga gcccgataag aagaactacc accgatacaa ccaaagacgc aatgttcatc
      541 acgcctgaat ttacaacttc gttcatttca ccacctctga gtagaggcgc tattctacca
      601 ctgctggaga ggaagaaaat ctagtgctga aaaaatgata tcaccacggg ataaactggt
      661 taatggcaca aattccgctg aaaaattgta catcctgatc gcacatcatg ttgaatacct
      721 gcgcccaaag cagcaagcaa gccaacacca cgacaaccag aacgacccat cgaaactttt
      781 tcactccaat ctccgcttca cctaccttat gtcattaaac tagcatgcgt tagttaaaca
      841 gcgcctaact atgtcgatat tcgtgctttt tcggaatgag tagcttgctt cagcgcatat
      901 tgccgctacg attaagcgaa cataaaaaga gaagaggttg taatgcgatt catcattcgc
      961 acagttatgc tgatagcact ggtatggata ggattattac tcagcggata tggcgttttg
     1021 attggaagca aagagaatgc cgcaggatta ggtttgcaat gtacctatct gactgccaga
     1081 ggcaccagca cggtacaata cttgcacact aaaagtggtt tcttggggat aacagattgc
     1141 ccactgttac gtaaaagcaa tatcgtggtc gataatggtt aagggtaata aataaccaga
     1201 ttctcactca tgagtaaaat attcttatag caagcgcgtt taatataacg caccttcaac
     1261 tttatttttc tcatgctaaa taaagaacct gtctgtttga tattccgaca ggttcttact
     1321 ctcatcagaa cggatagtcg tgataaccca tttgggcaga aattttgcgc gctgcggtat
     1381 gcaacattgc gacatattcc tgtaaacgct cttcagagaa acgcaacgtc gggaaggaga
     1441 tgctcaaacc ggcaatgacc acgccaaagc gatcaaatac cggtaccgca atgcatcgca
     1501 gcccttcttc ctgctcttcg ttatcttcgc catacccctg ctcgcgcacc tggtccagaa
     1561 cgggtaataa cgcttctgta ctggtgatgg tccgctcggt actgcgttta tactccacgc
     1621 cctcaagaat ttgcttcact tcatcgcgat cgcgccatgc cagcagtacc ttaccaatcg
     1681 cggtgctgta cagcggatta cgacgcccaa tccgtgaata catgcgcaaa ttgtacatag
     1741 agtcaatttt gtgaatgtaa acaatactgt cttcgtccag tgcgccgagg tggatagttt
     1801 ctttggtcag gcgggagatc tcacgcatct ggatatctgc gctacgaatt aaatcgacgt
     1861 tttgtaacgc gcgagcgccc agttcaaaca atttcagggt cagggaatat ttctccgact
     1921 ccccttcctg cgccacataa cctaaggttt tcatggtctg taaaaagcga taaacggtgc
     1981 tttttgacat catgacgcgc tgcgacagct cggttatccc tatttcgcgc tcttcaccca
     2041 gcgcctgcaa aatgccaaaa acttttagca cggaagatac agaatcaggc tgtttatcca
     2101 gatctgcgtt agccatttat cacctcattg cgagtgtttt ataaaaatca gaactgtttt
     2161 ttattataat ttcgcaccag gggggtcgca atccatcttt tgccggttag ttacaattct
     2221 gcgacatcca ccgtgaatat cagtgctaga atcatacccc tgttgattat tcaccaaaga
     2281 tataaaattc ctatgccaaa agttcaggcc gacggcctgc cattgcccca gcgatacggt
     2341 gcgatattaa ccattgtgat tggtatttcg atggctgtcc ttgacggcgc aatcgccaac
     2401 gtcgccctgc caacaatcgc cacggacctt catgccacgc cagccagttc catctgggta
     2461 gtgaacgcct atcaaatcgc cattgtcatc tccctgctct cgttttcgtt tctgggcgat
     2521 atgtttggct atcgacgtat ttataaatgc ggtctggtcg tttttctgtt gtcttcactg
     2581 ttctgcgccc tttctgattc gctgcaaatg ctcacccttg cgcgtgtcat acaaggtttc
     2641 ggcggtgcag cgttgatgag cgttaatacc gcacttatcc gcctgatcta tccacaacgt
     2701 tttctgggga gagggatggg cataaactcg tttattgttg ccgtctcttc tgctgccggg
     2761 ccgacaattg ctgcagcaat cctctccatc gcatcctgga aatggttatt tttaatcaac
     2821 gtaccgttag gtattatcgc cctgcttctg gcgatgcgtt ttctgccacc caatggttct
     2881 cgcgccagta aaccccgttt cgacctgccc agcgccgtga tgaacgcgtt aaccttcggc
     2941 ctgcttatca ctgcgttgag tggtttcgct caggggcaat cgctgacgtt aattgctgcg
     3001 gaactggtgg taatggttgt tgttggtatt ttctttattc gccgccagct ttctcttccc
     3061 gtaccgctgc taccggtgga tttactgcgt atcccgctgt tttcactttc tatttgcaca
     3121 tctgtttgct ctttctgcgc acaaatgctg gcaatggttt ccctgccctt ttacctgcaa
     3181 accgtgctcg ggcgtagtga agtcgaaaca ggtttacttc tgacaccgtg gccgttagca
     3241 acgatggtga tggctccgtt ggcaggctat ttgattgaac gcgtacatgc aggattgctg
     3301 ggtgctctag ggttgttcat catggctgcg gggctttttt ccctggttat gctgcccgcg
     3361 tcacctgcgg atatcaatat tatctggccg atgatcttat gtggcgctgg atttggcttg
     3421 ttccagtcac ccaataacca caccattatt acctccgctc ctcgcgaacg tagcggtgga
     3481 gccagtggca tgttaggaac ggctcgtcta ctgggtcaga gtagcggcgc ggcactggtg
     3541 gcgctgatgc taaatcagtt cggtgataat ggtacgcacg tttcgctgat ggctgcggct
     3601 attctggcag tgattgctgc ctgtgtcagt ggtttacgta tcactcagcc acgatccagg
     3661 gcataaaaaa agcgcgtcga tcagg
//
LOCUS       DAJVUK010000245         3678 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.249, whole genome shotgun sequence.
ACCESSION   DAJVUK010000245 DAJVUK010000000
VERSION     DAJVUK010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3678
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.249"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(168..482)
                     /gene="fliE"
                     /locus_tag="OQQ57_004107"
     CDS             complement(168..482)
                     /gene="fliE"
                     /locus_tag="OQQ57_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HCS1958651.1"
                     /translation="MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHAALDR
                     ISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM
                     QV"
     gene            697..2355
                     /gene="fliF"
                     /locus_tag="OQQ57_004108"
     CDS             697..2355
                     /gene="fliF"
                     /locus_tag="OQQ57_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HCS1958652.1"
                     /translation="MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAK
                     APDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGL
                     PKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPS
                     LFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLT
                     LSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTE
                     EQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNN
                     RQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGK
                     PLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
                     LLAAGRWLLVLLVAWLLWRKAVRPQLTSRAEAMKAVQQQAQAREEVEDAVEVRLSKDE
                     QLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE"
     gene            2348..3343
                     /gene="fliG"
                     /locus_tag="OQQ57_004109"
     CDS             2348..3343
                     /gene="fliG"
                     /locus_tag="OQQ57_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HCS1958653.1"
                     /translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV
                     TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD
                     TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLR
                     IATFGGVQPAALAELTKVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
                     REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR
                     NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
     gene            3336..>3678
                     /gene="fliH"
                     /locus_tag="OQQ57_004110"
     CDS             3336..>3678
                     /gene="fliH"
                     /locus_tag="OQQ57_004110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416450.2"
                     /note="binds to and inhibits the function of flagella
                     specific ATPase FliI; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HCS1958654.1"
                     /translation="MSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQL
                     AQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGLEQGLAKAKSQQAPIHARMQQLV
                     SEFQTTLDALDS"
BASE COUNT          926 a          967 c         1028 g          757 t
ORIGIN      
        1 cttcctatga gcaaagcgaa gacaaaacat gttatcgcgt ttacggatcg tggatggcag
       61 aaaactttca ggatcaggta tccattttaa accagaaata gggtgagttt gtcccatcca
      121 tgccccacgc gggcagatgg gatgtaatta ccaacaggtt acaaaaccta cacctgcatg
      181 gacatcactt cctgatacgc cgccaccagc ttattacgca cctgaatccc catttgcata
      241 gaaactgagg ctttttgcat atcggtcatc acatcgttta acgccacgcc gggttcaccg
      301 agggtgaatt tttctgcctg cgtgcgggcg gctgtttgtg tatcgcttat gcgatcgagc
      361 gcggcgtgca gctgcccggc aaaactaatg gtcggttgcg gcagtgaatc ctgcgcacgc
      421 gcactcatcg ccgtagcctg taactggctg ataacccctt caatcccctg tatcgctgac
      481 attttcgtct cctggataat ttctggtagc aaagcctacc agtaagtcaa taagacaaag
      541 gcgctaaata gcaacaaaaa aacgggttta ttggcggata gaaaaaaacg aaagcacaaa
      601 taatggcagc gtcaattttt cgagtttgct gacccgggag tgagtcttgt tccactttgc
      661 caataacgcc gtccataatc agccacgagg tgcgcgatga atgcgactgc agcccagaca
      721 aaatctcttg agtggcttaa tcgcctgcgt gcgaatccga aaattccatt gattgttgcc
      781 ggttccgcgg cagtggcggt catggtcgca ctgatcctgt gggcgaaagc ccccgactac
      841 cgcacattat tcagcaatct ttccgatcag gatggtggcg caattgtcag ccaactgacg
      901 caaatgaata ttccttaccg cttcagcgaa gccagcggcg ctattgaagt tccggcagat
      961 aaagttcacg agctgcgtct gcgcctggcg caacaaggtt tgcccaaagg cggcgcggtc
     1021 ggtttcgaac tactcgatca ggaaaagttt ggtatcagcc agttcagcga acaggtgaat
     1081 tatcagcggg cgctggaagg cgagctttct cgtaccatcg aaactatcgg cccggtaaaa
     1141 ggggcgcgcg tacatctggc aatgccgaaa ccgtctttat tcgtccgtga acaaaaatcc
     1201 ccttctgcat cggtgacggt aaatctatta cccggccgcg cactcgatga agggcaaatt
     1261 agcgccattg tacatctggt ttccagcgcg gttgctggtc tgccgccggg gaacgtcacg
     1321 ctggtggatc agggtggaca tctgttaacc ctgtccaata ccagcgggcg cgatcttaat
     1381 gacgctcagt tgaaatatgc cagcgatgtc gaaggccgga ttcagcggcg tattgaagcg
     1441 atcctgtcgc caattgttgg taacggtaat attcacgccc aggtcacggc gcaactggac
     1501 ttcgccagta aagaacaaac ggaagaacag tatcgcccta acggtgatga atctcatgcg
     1561 gcgcttcgtt cacgccagct taatgagagc gagcaaagcg gttccggtta tccgggcggc
     1621 gtaccggggg cgttgtcgaa tcaaccggca cctgcgaata acgcgccaat cagcacgcct
     1681 ccggcaaatc aaaataaccg ccagcagcag gcgagcacca ccagcaatag cgggccgcgt
     1741 agcacacagc ggaatgaaac cagtaactac gaagtcgatc gcaccattcg tcataccaaa
     1801 atgaacgtgg gcgatgtgca acgtctgtca gtcgcggtag tggtaaatta caaaaccttg
     1861 ccagacggta aaccattgcc tctcagcaac gaacagatga agcaaattga agatctgacc
     1921 cgcgaggcga tgggcttttc tgaaaaacgc ggtgactcgc tcaatgtcgt taactcgccg
     1981 ttcaatagca gtgacgaaag cggcggagaa ctgccgttct ggcaacagca agcgtttatc
     2041 gatcagttgc tggctgccgg tcgctggttg ctggtactgc tggtggcgtg gctgctgtgg
     2101 cggaaagcgg tacgcccgca gttaacaagt cgcgccgagg cgatgaaagc tgtacagcaa
     2161 caggcgcagg cccgtgagga agtggaagat gcggtggaag tccgcctgag caaagacgaa
     2221 caactccaac aacgacgcgc taaccaacgt ctgggggcag aagtcatgag ccagcgtatc
     2281 cgtgaaatgt ctgataacga tccgcgcgtg gtggcgctgg tcattcgcca gtggataaat
     2341 aacgatcatg agtaacctga caggcaccga taaaagcgtc atcctgctga tgaccattgg
     2401 cgaagaccgg gcggcagagg tgttcaagca cctctcccag cgcgaagtgc aaaccctgag
     2461 cgctgcaatg gcgaacgtca cgcagatctc caacaagcag ctaaccgatg tgctggcgga
     2521 gtttgagcaa gaagctgaac agtttgccgc actgaatatc aacgccaacg attatctgcg
     2581 ttcggtattg gtcaaagctc tgggtgagga acgtgccgcc agcctgctgg aagatattct
     2641 cgaaactcgc gataccgcca gcggtattga aacgctcaac tttatggagc cgcagagtgc
     2701 cgccgatctg attcgcgatg agcatccgca aattatcgcc accattctgg tgcatctgaa
     2761 gcgcgcccag gccgccgata ttctggcgtt gttcgatgaa cgtctgcgcc acgacgtgat
     2821 gttgcgtatc gccacctttg gcggcgtgca gccagccgcg ctggcggaac tgaccaaagt
     2881 actgaatggc ttgctcgacg gtcagaatct caagcgcagc aaaatgggcg gcgtgagaac
     2941 ggcagccgaa attatcaacc tgatgaaaac tcagcaggaa gaagccgtta ttaccgccgt
     3001 gcgcgaattc gacggcgagc tggcgcaaaa aattatcgac gagatgttcc tgttcgaaaa
     3061 tctggtggat gtcgacgatc gcagcattca gcgtctgttg caggaagtgg attccgaatc
     3121 gctgttgatc gcgctgaaag gggccgagca gccactgcgc gagaaattcc tgcgcaatat
     3181 gtcgcagcgt gccgccgata ttctgcgcga cgatctcgcc aaccgtggtc cggtgcgtct
     3241 gtcgcaggtg gaaaacgaac agaaagcgat tctgctgatt gtgcgccgcc ttgccgaaac
     3301 tggcgagatg gtaattggca gcggcgagga tacctatgtc tgataatctg ccgtggaaaa
     3361 cctggacgcc ggacgatctc gcgccaccac aggcagagtt tgtgcccatg gtcgagccgg
     3421 aagaaaccat cattgaagag gccgaaccca gccttgagca gcaactggcg caactgcaaa
     3481 tgcaggccca tgagcaaggt tatcaggcgg ggattgccga aggtcgccag caaggtcatg
     3541 agcagggcta tcaggaagga ctggcccagg ggctggagca aggtctggca aaggcgaagt
     3601 ctcaacaagc gccaattcat gcccggatgc agcaactggt cagcgaattt caaactaccc
     3661 ttgatgcgct tgatagtg
//
LOCUS       DAJVUK010000246         3521 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.250, whole genome shotgun sequence.
ACCESSION   DAJVUK010000246 DAJVUK010000000
VERSION     DAJVUK010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.250"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(296..991)
                     /locus_tag="OQQ57_004111"
     CDS             complement(296..991)
                     /locus_tag="OQQ57_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HCS1958655.1"
                     /translation="MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQ
                     QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER
                     LQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLP
                     ESSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH
                     GPVKAVYLIIEDC"
     gene            complement(984..2411)
                     /locus_tag="OQQ57_004112"
     CDS             complement(984..2411)
                     /locus_tag="OQQ57_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HCS1958656.1"
                     /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE
                     LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVWFAKNKEDATRYILQVAQ
                     RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
                     DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
                     VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
                     PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
                     SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
                     GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR
                     DLPEADGESFRSWFKKHQAQEKKNG"
     gene            complement(2422..3141)
                     /locus_tag="OQQ57_004113"
     CDS             complement(2422..3141)
                     /locus_tag="OQQ57_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HCS1958657.1"
                     /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
                     PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAE
                     KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
                     ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVGHLMEVRPEYLIGADVSCLLNISG
                     RLQREGQKVKVMHIAEVLMSR"
BASE COUNT          894 a          968 c          738 g          921 t
ORIGIN      
        1 tttgccttgt caaaaaaatg gtagatgaat accaacaaaa ctctgggcag taataaacaa
       61 cattctgata gagagtgcct gtataaagct gaagtgacaa tgaccgggaa gggaacccgt
      121 tttcaggaat ggatgcctgt ctttttcact gtaaatatcc tggcattact aatgccagga
      181 tatttacaga agagcagcat aaccatgacg gaacggggtt aagtcaggtt gtccttaacg
      241 ctattttcaa cctcgtatgc cttcttcagg tttatgttca gatctcatat ctctctcagc
      301 aatcctcaat aatcagatac accgctttca ccgggccatg aaccccgacg actttgataa
      361 gctcaatatc cgccgttgaa ctagggccgc taatgatgtt aatgcaggac ggcattcgtt
      421 caccggcctg cgctttctga tgcaattttt ctgcgagttg cgctacacgc ggcaggattg
      481 tgcttttacg caggataaaa agagaagatt ccgggagcag gctcaatgaa cgcccgcgct
      541 cggcggcgga aaaaagaacc acgcctcccg attcggttaa accatattca gcatacacaa
      601 cacccacttt agcctgctct gcctgcgaga tattctcggc acctttcgcc ggatcccaaa
      661 caacggcatt gcattcctgc tgcaaacgtt cactaatccc caattcctcc agcctcgtgt
      721 caccgctaat cacgaccgac tgatctccca gctctttaca cagacgtatt gcagcttctg
      781 ccgccttcgc ctcgctggtc agctcacagc gcgtcaacat aacatcgctg gcaaactgaa
      841 taaacgcgtc acagcgctgc tgttggttaa gttgggtaag ccgctcgtta gcatagttgt
      901 taagcggcgc atcttctgct tgcggttcaa gtcgcagcgg gcgacccagt gcctgagcaa
      961 cgttattcaa aaattcgcct cgattatcca ttctttttct cctgcgcctg atgtttctta
     1021 aaccaactac ggaaactctc tccgtcagct tcaggaagat cgcgtgcttc catccagtcg
     1081 ctaatcgcgc caaatttgag tggtgttttg ccgccattga taaaccagct tgccgcatga
     1141 gcgccggcca tcatcccgac tttccacaat cctggatgac tattggcata agcgaacatt
     1201 tttatcgccc gttgctctgc ttttgcggtg atcccttttt cagccatcac ccgacgatga
     1261 cgcaaaatca gttttgacag cggaatacgc accggacaca cgctgtcaca agcagtgcat
     1321 aaagagcagg cgtagggtaa atctttaaaa tctttatagc cgccaagtag cggagaaatc
     1381 accgcaccaa ttggccctgg ataaatagag ccatatccat gaccgccaat atggcgatat
     1441 gccggacaag tattcataca agccccgcag cgaatacagc gcagcacatc ccgaaattca
     1501 gaggccagca cctcagaacg cccgttatcg acaataacca gatgaaactc ttcaggacca
     1561 tcaacgtgcc ccgcttcgcg cggtcctgtc agccaggtgt tgtatcccgt caaacgtgca
     1621 ccaacggcac tgcgcgccag catggtgatc aatacatcta cctcggcaaa cgtgggggca
     1681 atacgctcca ttcccatcac tgcaatatgc gttttaggca gcgtggtaca cattcgcgca
     1741 ttaccttcat tggtcaccag gcataccgaa cctgtctctg ccaccgcgaa attacagccg
     1801 gtaataccta tttcagcact gaggaaatct tcgcggattt tttgccggat gaataaggtc
     1861 atcgcttcag gcgtttccgg cccctcatag cccagacgtt cgtgtagcac tcgacggatc
     1921 tgatggcgat ctttatgaat tgccgggacc acaacatgag atggcggatc ttgatccagc
     1981 tggagaatat attcacccag atcggtttca atcacctgaa tgccagcatc ctgcaacaca
     2041 tgattgacac caatctcttc ggtcaccatc gatttagatt tcaccacctt ccgggcattt
     2101 ttgcgttggg caacctgtaa aatgtagcgg gtagcgtctt ctttgttttt tgcaaaccag
     2161 acgtgaccgc cgttttgcgt cactttttct gagagctggt acagataagc gtcgagatta
     2221 ctcagaacat gatcacgtat ctgggcggcc cgatcgcgcc actcctccca gtgccccaat
     2281 tcatcgacca ttttttgccg atttgcccca atacgctgct gcgcgtttgc caccgctttg
     2341 cgcatgatcg gatcttcaat ttgctgacgg atgcgagtct taaaatctgt attactggtt
     2401 ttgatcgaca tctttatatc ctcagcggct catcaacact tcagcaatat gcatcacttt
     2461 gactttctgc ccttcccgtt gtaatcgccc actgatgttc agcaggcaac tcacgtcagc
     2521 accaattaaa tactcagggc ggacttccat caggtgccca accttttctt tcaccatctc
     2581 gccggatatt tcggccattt tgaccgagaa cgtgccgcca aatccgcagc aggtatcctg
     2641 ttcagcaaag gtcaacagct ccagtccacg cacatttttc agcagcgtaa gtggctcgtc
     2701 cttcactccc agcttacggg ccaggctaca agatgggtga tacacagctc tcccttgcaa
     2761 actggcacct acatcgacta cccctaattt attaacaata aaagaggtga gatcctgcat
     2821 acgcgcggca accttttcgg cacgtgatgc ccattcaggt tcatccgcca gatacgtcgg
     2881 gtaacttttt acggcatagg tgcaagagcc agccggtgaa ataatgggat cgtcgttatc
     2941 ctccagtgcg gcgatcagat ttttcatccc tggaatcgct tctttgatat aaccgctatt
     3001 gatcgcaggc tgaccgcagc atccctgttt ctccgggaaa tttacgcgac agccgagttt
     3061 ttccagtagc agcacggagt ctcgtgccat tcttgatttc agggcgtcac caatacaggt
     3121 gacaaagaaa ttgacattca caactaatac tccattactt catgcccatt tatgcccgat
     3181 gtttcccccc caccggggga tcaatcatca ataaatatgg cgttcttttt taattggcta
     3241 gcaacatact acccctcatt tgtatgacaa atgataatct ttcacccaaa cgtcaaatgc
     3301 aataactaat tttatttctt tcggcatcgc tcacatttta tggagaaatc gacgatcatt
     3361 tttggcataa gaaatccatt taaaaatggc cacatccctt atacctattc agagctactt
     3421 attcaggggt tattgagata tacactgatg gtgtacaaac aaaatcaccg acaataatca
     3481 cgtatcaagt aatagtcggg attttattta attgaagcaa t
//
LOCUS       DAJVUK010000247         3488 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.251, whole genome shotgun sequence.
ACCESSION   DAJVUK010000247 DAJVUK010000000
VERSION     DAJVUK010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.251"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..1947
                     /locus_tag="OQQ57_004114"
                     /pseudo
     CDS             1..1947
                     /locus_tag="OQQ57_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
     gene            complement(1990..2436)
                     /gene="ivy"
                     /locus_tag="OQQ57_004115"
     CDS             complement(1990..2436)
                     /gene="ivy"
                     /locus_tag="OQQ57_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ivy family C-type lysozyme inhibitor"
                     /protein_id="HCS1958658.1"
                     /translation="MFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQG
                     HKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFS
                     TIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            2617..3387
                     /gene="yafV"
                     /locus_tag="OQQ57_004116"
     CDS             2617..3387
                     /gene="yafV"
                     /locus_tag="OQQ57_004116"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HCS1958659.1"
                     /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAI
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR"
BASE COUNT          778 a          891 c         1001 g          818 t
ORIGIN      
        1 atgattatca aaaaagagta cggctgactg gagttctcag cttatgccca gtctcgcgtg
       61 ctgcaaaaac tctccggcgt gagcgggatc ctggcgatta ccgtcggcgt gccgaactca
      121 ttaggcccgg gcgagctgct gcaacattac ggcactgacg agcagaaaga tcactatctg
      181 ccgcgtctgg cgcgtggtca ggagatccct tgctttgcac tgacaagccc ggaagcgggt
      241 tccgatgcgg gcgcgattcc ggacaccggg attgtctgca tgggcgaatg gcagggccag
      301 caggtgctgg ggatgcgtct gacttggaac aaacgctata ttacgctggc accgattgcg
      361 actgtgcttg ggctggcgtt taaactctcc gacccggaaa agctgctggg tggcgcagaa
      421 gatttaggta ttacctgtgc gctgatcccg accaccacgc cgggcgtgga aattggtcgt
      481 cgccacttcc cgctgaacgt accgttccag aacggaccga cgcgcggtaa agatgtcttc
      541 gtaccgatcg attacatcat cggtgggccg aaaatggccg ggcaaggctg gcggatgctg
      601 gtggagtgcc tctcggtagg ccgcggcatc accctgcctt ccaactcaac cggcggcgtg
      661 aaatcggtag cgctggcaac gggcgcgtat gctcacattc gccgtcagtt caaaatctct
      721 atcggaaaga tggaagggat tgaagagccg ctggcgcgta ttgccggtaa tgcctacgtg
      781 atggatgctg cggcatcgct gattacctac ggcattatgc tcggcgaaaa acctgccgtg
      841 ctgttggcta tcgttaagta tcactgtacc caccgcgggc agcagtcgat tattgatgcg
      901 atggatatca ctggtggcaa aggcattatg ctcgggcaaa gcaacttcct ggcgcgtgct
      961 taccagggcg caccgattgc catcaccgtt gaaggggcta acattctgac ccgcagcatg
     1021 atgatcttcg gacaaggagc gattcgttgc catccgtacg tgctggaaga gatggaagcg
     1081 gcgaagaaca atgacgtcaa cgcgttcgat aaactgttgt tcaaacatat cggtcacgtc
     1141 ggtagcaaca aagttcgcag cttctggctg ggcctgacgc gcggtttaac cagcagcacg
     1201 ccaaccggcg atgccactaa acgctactat cagcacctga accgcctgag cgccaacctc
     1261 gccctgcttt ctgatgtctc gatggcagtg ctgggcggca gcctgaaacg tcgcgagcgc
     1321 atctcggccc gtctggggga tattttaagc cagctctacc tcgcctctgc cgtgctgaag
     1381 cgttatgacg acgaaggccg taatgaagcc gacctgccgc tggtgcactg gggcgtacaa
     1441 gatgcgctgt atcaggctga acaggcgatg gatgatttac tgcaaaactt cccgaaccgc
     1501 gtggttgccg ggctgctgaa tgtggtgatc ttcccgaccg gacgtcatta tctggcacct
     1561 tctgacaagc tggatcataa agtggcgaag attttacaag tgccgaacgc cacccgttcc
     1621 cgcattggtc gcggtcagta cctgacgccg agcgagcata atccggttgg cttgctggaa
     1681 gaggcgctgg tggatgtgat tgccgccgac ccaattcatc agcggatctg taaagagctg
     1741 ggtaaaaacc tgccgtttac ccgtctggat gaactggcgc acaacgcgct ggcgaagggg
     1801 ctgattgata aagatgaagc cgctattctg gtgaaagctg aagaaagccg tctgcgcagt
     1861 attaacgttg atgactttga tccggaagag ctggcgacga agccggtaaa gttgccggag
     1921 aaagtgcgga aagttgaagc cgcgtaattg aataacggag ccgaaaggct ccgtttcttt
     1981 atccgctaat tatttaaaat taaagccatc cggatggttt tccaggctgc cggtcaacgc
     2041 cgcgaacagc accgttttac catcaatcga aagcgcatcg ttcacattca gccaggtgag
     2101 tttctcttgc gacgttttct catcaatagt cgagaacagc cccgtcatct gattagattt
     2161 ctcggaccac atcacagcga tacgttgcga gccacagtca tgcggtttgc acgcgctcat
     2221 cacctgatac gtctcatctc ccaacgttac ggtttgtgcg ggagtataag taccgccttt
     2281 catcacccag gcaggcagct tatgcccttg taccatctga ttaaatgcag ctttggtggt
     2341 ttcgcccttt gcaaggctgc taatggttaa atcatcctgc gccattgcac tggtggcgat
     2401 gaccagagcg gcgactgtcg ttattgcctt aaacatcatt cctcccgagc ttatcctgcc
     2461 catgttatta accttctaaa gcctggcgat aacacgataa tttgcaaatc agatatttcc
     2521 aatatcagca tttgttatca atttattctg cgctaaggca actgcctgat aaggtgttaa
     2581 agttataaaa cccttcgcat aaaggagttg tacaccgtgc ctggtttgaa gattacgctt
     2641 ttgcagcaac cactggtgtg gatggatggc cctgccaacc tgcgtcattt tgatcgtcaa
     2701 ctggaaggta ttaccgggcg cgatgtgatc gttctaccgg agatgtttac cagcggcttt
     2761 gccatggaag cggcagcttc gtcgctagca caagatgacg tagtgaactg gatgacagct
     2821 aaggcgcagc agtgcaatgc gctgatagca ggcagtgttg cattacaaac ggagtctggt
     2881 tcggttaacc gctttttgct ggttgagccg ggcggcacgg tacattttta tgataagcgt
     2941 catctgttcc gcatggcaga tgagcatcta cattataaag cgggcaatgc gcgagtgatt
     3001 gtggaatggc gcggctggcg tattttgccg ttggtgtgct acgacttacg ttttccggtg
     3061 tggtcgcgca atctcaacga ttatgacctc gccatctacg ttgccaactg gcctgctccg
     3121 cgctctctgc actggcaggc attgctgacg gcccgcgcga ttgagaatca ggcgtatgtg
     3181 gcgggatgca atcgcgtcgg cagcgatggc aacggctgcc attatcgcgg tgacagccgg
     3241 gtgattaatc cacaaggcga gattatcgct actgccgacg cgcatcaggc aacgcgcatt
     3301 gatgcggagc tgtcgatgat ggcattgcgg gaatatagag aaaagtttcc ggcatggcag
     3361 gatgcggatg agtttaggtt gcggtgagtg ggggttgtgt ttaaggctgg gggagagtcg
     3421 gggtaagact acgaaagccc gctctccgca aggactgacg ccagatagtt tctgtccata
     3481 gctgcttt
//
LOCUS       DAJVUK010000248         3410 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.252, whole genome shotgun sequence.
ACCESSION   DAJVUK010000248 DAJVUK010000000
VERSION     DAJVUK010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.252"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(20..322)
                     /locus_tag="OQQ57_004117"
     CDS             complement(20..322)
                     /locus_tag="OQQ57_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000890114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958660.1"
                     /translation="MLEIVLSPVKAQQFTVTLGAQVCTIRLNQRTTGMYIDIIVNGEP
                     CLYGVLCLNNNRIVRYGYLPFQGDLFFTDTEGNSDPDWRGLGSRYRLYWLLPEELI"
     gene            complement(322..1032)
                     /locus_tag="OQQ57_004118"
     CDS             complement(322..1032)
                     /locus_tag="OQQ57_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000010340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958661.1"
                     /translation="MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIY
                     YARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTVPVEQGAYTTFNKIQRSPELHVT
                     FIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKY
                     DYRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTAS
                     VTQPSDADRRSATNRGIT"
     gene            complement(1029..3050)
                     /locus_tag="OQQ57_004119"
     CDS             complement(1029..3050)
                     /locus_tag="OQQ57_004119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HCS1958662.1"
                     /translation="MAQVLDELVLSLGIDDRDFTAGEQAVHAALNRLTTVMEGVADTF
                     SQGQKKTSESLEKTGKDADKTARRMEDAGKRASRFFSGIRSEILALAGVSLTLGGLKN
                     LVTGFARDLNRLSVESDAFGMKARNLDGWLRAARANNVDEGEMSGAFSRLANAKAAFR
                     AGRSFDPVLQDLFQVAARAGISVDLNTDSTEAIMRKLAVIFPRLTKSEQTAYGNALGF
                     SYAGQQFLGSGHALKDVDEFTSRSQVTPGRTALARKLRKELVELDQTWSGIGMTISTA
                     LMPYALKLSHWLETLGDWMQQHPEEVNRFITTFLNDVESVASLANKAAGELGGWQNVI
                     ITLIGLKVASWVRGLTKALSGPGGLLFAITALYPVVDGLLTSIVGRENKDWLDSHGFF
                     WASDGTFFFNKKEMETYQTKLDVGEKPGNITRAQSPTVWQQGMLDTQASQATGREAAF
                     GESWLQGMRATQEKLGNAMQNRQRPTKTGEALLGWLQPKLSQLEEKYNLPPGLLRSVA
                     ITESRGNQFAVSPAGAMGLFQFMPKTASEFGLRGNDAFDPEKAADAAARKLGGLIRFF
                     HGDLAKALAAYNWGEGNVQRKGLAAAPEETRNYIPRVLANLPYPGAAMAIRSLHPAPV
                     SQSTVTETTHIGTLNVTTTSDNVKGITDDARRRITNSALVSVYSSGVTG"
     gene            complement(3034..3216)
                     /locus_tag="OQQ57_004120"
     CDS             complement(3034..3216)
                     /locus_tag="OQQ57_004120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000228829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HCS1958663.1"
                     /translation="MVDYVNVPRTIATVISSGKASKAELDSVLGVQDLWDLLEIIHVD
                     AHNEQVIQENRNGAGT"
BASE COUNT          798 a          993 c          814 g          805 t
ORIGIN      
        1 attttacgtt gtctgtagct catatcagtt cctcaggtaa cagccagtag agccggtacc
       61 gggatccgag cccccgccag tcagggtcac tattcccctc cgtgtcggta aaaaacaggt
      121 ccccctgaaa cggcaggtat ccgtaccgga caatccggtt attattcaga cacagcacgc
      181 catacaggca cggttcacca ttaacaatga tatcgatata catccccgta gtacgctgat
      241 tcaggcgaat ggtgcagacc tgagcgccca gtgtcaccgt aaactgctgg gctttaacgg
      301 gagataaaac aatttccagc atcaggtgat ccccctgttc gtggcacttc gtctgtcagc
      361 gtctgacggt tgtgtcaccg acgccgtaac tggctgcgtt ttaaccgatg cggccccttt
      421 tgctttatcg ttgtccgtgg gagacgactt atccgtactt cccactgaca cctctcctgt
      481 attcattacg gtctgaaata ccgcagtaac cgtcagtaag gtcggaccat tattacttcg
      541 cattcggtag tcatatttca caaggtcgca ggatgtccat gtcttgtccg gcgtctcaat
      601 atcgtagagt cctgccgtgg tacgcatcct ttcaagcgtt tccagcacat tcgtccgcga
      661 ggtggtggaa aaatttgtca ggttcgggac ggatccggaa aaggccgtcc acccctctac
      721 aatgaaagtc acatgcagtt ccggcgatct ctggatttta ttaaaggtgg tataagcccc
      781 ctgctccacg gggacggtgg aaacagaagc ctccgcgccc acctcaacga caacaaaaga
      841 atccggggag aaaggtttgc cacccttctg atgggcacct gccggatcat tccgtgcgta
      901 ataaataccg aatgacggtg ccagtacact attaatgagt cccaggacac cgccgccacg
      961 aactgcactc agtacgttac tttcactgag cgaaaagtta ttcagggaaa tattatcgaa
     1021 agaaaaactc atcctgttac cccgctggaa taaaccgaca caagcgccga attcgtgata
     1081 cgccgacgtg cgtcatcggt aatacccttc acattgtccg acgttgtggt gacattcagt
     1141 gtcccgatat gcgtggtttc cgttacggtg gactgcgata caggcgcagg atggagcgac
     1201 cgtatggcca ttgccgcacc cggataaggc aggttcgcca gcacccgcgg aatatagttg
     1261 cgggtctcct ccggagcagc agccagtccc ttacgctgaa catttccctc tccccagtta
     1321 tatgccgcca gagccttagc cagatcgcca tgaaaaaaac gtatcaggcc accaagtttt
     1381 ctcgcggcgg catcagcggc tttttcggga tcaaaggcat cgttccccct cagaccaaat
     1441 tcactggccg tcttcggcat gaactgaaac agtcccatcg caccagcagg tgagacggca
     1501 aactgattac cacgggattc ggtgatcgca acgctgcgca gcagtccggg cggcaggtta
     1561 tatttttcct ccagttgaga cagtttcggt tgcagccagc ctaacagggc ttccccggtc
     1621 ttcgtcggtc gctggcggtt ttgcatggca ttaccgagtt tttcctgcgt cgcacgcata
     1681 ccctgtagcc aggattcacc gaaggctgct tccctcccgg ttgcctgaga agcctgagta
     1741 tccagcatgc cctgctgcca tactgtgggt gattgtgccc gggtgatgtt gccaggcttt
     1801 tctccgacat ccagttttgt ctgatacgtc tccatctctt tcttattgaa aaagaaagtc
     1861 ccgtctgaag cccagaaaaa accatgtgaa tccagccagt ccttattttc cctgccaaca
     1921 atggatgtca gtaatccgtc aacaaccggg taaagcgccg ttatcgcaaa aagaaggcct
     1981 ccggggccac tgagggcttt tgtcagcccc cgcacccatg acgccacttt cagcccgatc
     2041 agcgtaataa tgacattctg ccagcccccc agttctccgg cagccttatt cgccagggag
     2101 gccactgact caacgtcatt cagaaatgtg gtgataaacc tgttcacttc ctccggatgt
     2161 tgctgcatcc agtcaccgag tgtctccagc cagtggctga gcttcagcgc gtacggcatc
     2221 aacgcggtgc taatcgtcat cccgatgccg gaccaggtct gatcgagctc aacaagctct
     2281 tttcgtagct tacgggccag cgctgtacgc cccggcgtaa cctgcgaacg ggaagtaaat
     2341 tcgtccacat ctttcagcgc atgaccggag ccaagaaact gctgtccggc ataactgaag
     2401 cccagcgcgt tgccgtaggc agtttgttcg gactttgtca gtcgcggaaa aataaccgcc
     2461 agcttgcgca tgatggcttc agtgctgtca gtatttaaat caacactaat gcccgccctg
     2521 gctgcaacct gaaacaaatc ctgtaacaca ggatcaaagg accttccggc tctgaaggcc
     2581 gcttttgcat ttgcaagccg ggaaaatgcc ccagacattt ccccttcatc aacattattt
     2641 gcccgcgcag cccgtaacca tccgtccaga tttctggcct tcatgccaaa agcatcggat
     2701 tccacggaca gacggttcag atcacgggca aaacctgtta ccaggttctt cagccccccc
     2761 agcgtcagac tgacacccgc aagagccaga atctcgctac ggatccctga aaaaaaacgg
     2821 gacgcccgtt tcccggcatc ttccattcga cgggccgttt tatcagcatc ttttccggtt
     2881 ttttccagtg attcactggt tttcttctgt ccctgactga atgtgtcagc gacaccttcc
     2941 atcaccgtcg tgagccggtt aagggcagca tgtactgcct gttccccggc agtaaagtcc
     3001 ctgtcatcaa tcccgaggga cagaacaagc tcatcaagta cctgcgccat ttctgttctc
     3061 ctgtatcacc tgttcgttat gggcatccac atgaattatt tccagcagat cccataagtc
     3121 ctgcacacca aggacagaat ccagttcagc ttttgaagcc ttaccggagg agataacggt
     3181 cgcaatggta cggggaacat taacgtaatc caccaccccg aacggtctgt cggggtcgag
     3241 ataacgcggg gggatatcta gctgacgacg gtagcgaaaa aatccacatg cagcttaaag
     3301 acctccgcac gcagattaag acgggtaatg atttcttcaa tatcctcttc aacaagcggt
     3361 ctccggatgc tgcgtttttt cggatcggga acaaactgca cacagtccat
//
LOCUS       DAJVUK010000249         3374 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.253, whole genome shotgun sequence.
ACCESSION   DAJVUK010000249 DAJVUK010000000
VERSION     DAJVUK010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.253"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(45..2697)
                     /locus_tag="OQQ57_004121"
                     /pseudo
     CDS             complement(45..2697)
                     /locus_tag="OQQ57_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415720.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT          840 a          791 c          781 g          962 t
ORIGIN      
        1 aaaagaacaa atggtagtgt ccgctattgc cagtacacct cattcacata gacattcagc
       61 tggctgttgc ctgcggtgat gtcatacccc agtatcatgc tggcacgccc cagcagcgat
      121 tcgtagtgat tcagatgtat attgaggcca ttactcgcct tcatagccat ctcattctgg
      181 tggctgtatg taagctgggt ttgcggctct atatagaacc cataaccagt aggggacagg
      241 ttgaacctct gcccggcttc tagggagatg ctcattccat tcgcagtgcc gttggcgtta
      301 acgccgttgt tatgactgtc cagtacgtgg aaactatttt tctggcgcga tgcttttata
      361 acgagatcgc tgtaaaaacc gttttgtgcc atgtaactgg cgtacattcc catgtagtct
      421 gaacgtgcgg taccgtcgcc tccgctatag tccggcgatg catgtgttga gccaatatac
      481 agaccgacat acaacggcat ttcatcagag agacgtttat ccccaccaaa ctggataccg
      541 ctgtaaccca tgtcaaagcc gctcagtttg ccactggcaa aggagtccag gcttccccca
      601 taactgcgca accagatatt accgtcttta ctctgatttc gcaggtcacc catccgttgc
      661 atcagcgtac ggttttcaac atagttcaat aagtaaccga cattgagata attgccgcca
      721 gcatctgcgg tcgtggtggg tttaggcgtg ggagcgggtt caggcgtagg atcggggttg
      781 actatgggag gctgagcggg agctggtgtg ggttcaggat taggagtcgg ttccggaact
      841 gtcccggaag cgtaaagctc ccagttagtg ccatttttac gcacatcgta cagatatccc
      901 ccccaactca acctgagaag acgcgctgaa cgaggccgcg ccgtcagtgg tttttaccac
      961 tgtcagaact tcatttcccg ttgtggcctc gctgccctgg ttgcggatag ccaatacgtg
     1021 attaccagca ctactcccgc tgatattcaa taaatcccct ttattattaa cgccattacc
     1081 ctcgccaaca acatcagcac gcataataaa ggtactgtta ccgctcaggt tctctacgtt
     1141 taatgtggca aatgtgccgg cagttgaccc gtggctggca aaatcgacag ttgaatggct
     1201 cagcgccagc gtgtcgagat tagaattact tgttacgttc cagacgctgt tattcattgc
     1261 aacgtccagt tttccgccat tgacattatc gctgagggag gaacctgtcc aaaccgaccc
     1321 agggtgcata tccagattga ttagcccacc tttggaaaaa acgctaccgt tgataagcat
     1381 acgacccgag gcgttgatgc ggctggcggc ataaccatcg tcatgttgcg ttgcaatggc
     1441 catctggtcg ggtgtactca tatcaatgac cagatcgctc gtgaggtcga tctggctgtt
     1501 ggtcatggca taaattcccc tggctcctgc cgcgccggtg atagccaaac tgtctccggt
     1561 tattctaccg ccgctgagcg cccacaaacc cagcgccaga ctgccattac gatcaactgt
     1621 aatatcggta ttttgcatgt tgacaacagc cgttgccgtc tgggccgagg caccataaga
     1681 accgccggaa aagatgctgt ttcgttgcgc tgccgtgcca gaaaaattga ttgtcgcgtc
     1741 tgaaccactg gtgacgaggc caccgccctg cgcggaagaa atatggctat ctgcaccgat
     1801 agtggttgta ccaccacgaa cttcgacgcc attggccgcg gctccagtta catcaacagt
     1861 gagtgcattc gcgctaacct ggccaaagct ccagaggccg tgtgcattat cgccattggt
     1921 tttaatggaa ctgtttgttc cgagatcgac aacagagttt ttctgtacgt ttatccccat
     1981 ggcgctgtag ccctgaacat cgattgtcag gtctgtagcc gtaaaacgcg cagcaccatt
     2041 ggcgttattg ccgttgagac caccgatata aacacctgta cttccatcgg tcgtgatttt
     2101 acttccgctt ccaagatcga cactggtgcc atagtcattg atggttaggc ctataccgtt
     2161 cgagttttca atggtgaatt gagtggctgt tagtgttgag ctatgcccaa taatgatgcc
     2221 gtcatcgtta ctcttaatgg tgctgcctgt gcctaagtca gcatgggtat agtcaccaat
     2281 taagttaatg ccgatggcag aggtttgacc aacaacatct actgtgagtc ggttagctgt
     2341 cagggagctg tttttgccct gaataatgat tccttttgca tatccagagg cgtcgttgac
     2401 attgacggtg acatcattac ccaggttgat attgccaggc gtgtttcctg ctggggtcat
     2461 tacaccatag aggtttcctg atggatcggc ggtatctcct gtaattctgt caccatcatt
     2521 aatagtaata ttggtgccat attgacttcc tgtatcagca gctatcagca ggggggaaaa
     2581 gataattgca ttcaaaccaa tagcgccaaa ttttatcagt tgaattgagg gcgaacggat
     2641 ttttaattca gcgagacgat ctgctttggt attcccattg tgttgtttga tgcccatacc
     2701 actcctatat agtacccaga ctatgggtct atggattttg tcattttgtt taaatcaatg
     2761 aataatatcc tcttatcatc atgatatttg tatggtgcaa tcatgatgag cttctcagag
     2821 aataattctc tattaccggg caaaatcagg aacacaggaa ttaatatata tttaacatcc
     2881 cccttacaaa ggtgagttta tatcgagtta ttccctaagt tgtcgttact tattccaatt
     2941 cgttactata aatatggcaa aaatattaca acaaacagcg gttaaaaaat ttggtgaaga
     3001 ttttttgtaa taatcctaat tagttatggg aatttcgctt gatgtatctg cataacaaaa
     3061 acaatatgcg ccatttttgc attactaata agaaaaagca aaaaacatcg atattcattt
     3121 ttggtcaatg ggttttctgg cctatcgttg ttattgtgct actggttatc attttcatct
     3181 tgccagcata ttggagcgtg atcaattttg atcagctgtg aaggtggctg atgtgtagtg
     3241 atacaaaaac ttacgttata tcactgctaa tgagatatcc gtcatctgaa cacttatgtc
     3301 tttaattatt ctcgtggttc actataggca ataagcacaa aagtgtagga tgttacaaga
     3361 atgattagga ctcg
//
LOCUS       DAJVUK010000250         3321 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.254, whole genome shotgun sequence.
ACCESSION   DAJVUK010000250 DAJVUK010000000
VERSION     DAJVUK010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.254"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..212)
                     /locus_tag="OQQ57_004122"
     CDS             complement(<1..212)
                     /locus_tag="OQQ57_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958664.1"
                     /translation="MIRFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIF
                     SFPLLVVCISLQELQLELMVEYALFF"
     gene            complement(215..982)
                     /locus_tag="OQQ57_004123"
     CDS             complement(215..982)
                     /locus_tag="OQQ57_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958665.1"
                     /translation="MQPSPAMQALIEQIYHTFRRYRVPQKFVVCCEYCLSQQEQKALR
                     STSLRAIPYSLINAWNSSPGPDPQNSDEVRYFLPRLLEFVAQGHFDNIHVVFSLRRIN
                     LANKENWRADERAILQRFACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINS
                     VPGFWSTVSLACLLNRYCEDYIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIEN
                     PLKQPEPMTEYQVWEDDWIIDECLCAMYDASSESLGK"
     gene            complement(985..1695)
                     /locus_tag="OQQ57_004124"
     CDS             complement(985..1695)
                     /locus_tag="OQQ57_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958666.1"
                     /translation="MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQA
                     LDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPY
                     ISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW
                     KFHNNNSLRGFRDKQAELKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNA
                     ANARFVYQPFTRDQRARG"
     gene            complement(1711..3216)
                     /locus_tag="OQQ57_004125"
                     /pseudo
     CDS             complement(1711..3216)
                     /locus_tag="OQQ57_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001472437.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
BASE COUNT          934 a          798 c          729 g          860 t
ORIGIN      
        1 ctgaaaaaaa gtgcatattc aaccattaac tcaagttgta attcctgaag agaaatacac
       61 acaaccagga gcggaaagga gaatattatt tctgccagaa aagttaacgt gaatataagt
      121 acggctaaga caataaccgt cggccatacc aataatggca cgataacaaa accgagaatt
      181 acagggggaa tataaagccg gaatctaatc atttttattt tcctagtgat tcggatgatg
      241 cgtcatacat cgcgcataaa cactcatcaa ttatccagtc atcttcccag acctgatatt
      301 ctgtcattgg ttcgggctgt tttagcgggt tctcaatcgc ttgccgcgct ctttctttca
      361 gtaaaggatg attatttcta gcccaggcat tgatttgggt ggtaatgacg ttatcgatat
      421 cgtcctggtt atctctgata taatcctcac aatatctgtt caataaacag gcaagagaaa
      481 cggtcgacca aaagccggga actgaattaa tggcatccag caatggcgca agagcgatat
      541 cggcacggaa aaacatttcc agcatatact gtaattcgac agcttcatcg ccggataccc
      601 aatcagtcat atactggcag gcaaatcgct gtaaaattgc ccgttcatcc gcacgccagt
      661 tttctttgtt ggcaaggttg atacggcgca gagaaaaaac tacgtgaata ttgtcaaaat
      721 gcccctgtgc aacaaattcc agtaaacgcg gcagaaaata gcggacctca tcgctatttt
      781 gcggatcagg ccctgggcta ctattccagg cattgattaa ggaatacggg atcgctcgta
      841 acgatgtact ccgtaatgcc ttttgttcct gctgactcag gcaatattca caacaaacca
      901 caaatttctg cggcacccga taacgacgaa aggtgtgata aatctgctca attaatgcct
      961 gcatggcggg gctgggttgc atagttaccc cctcgcccgc tgatcgcgtg taaacggttg
     1021 atagacaaaa cgagcattcg ccgcgttcag gcgaataagg gcgctacgcg aaagggaaaa
     1081 gctggggcga atgcaactat tgcagtctcg acagctttcc tctgcgcaat tttccactga
     1141 gtaatgacgc gtgtagagtt tcagttcggc ctgcttatcg cgaaatccgc gtaaactgtt
     1201 attgttatga aatttccagg catctttaaa gacctgaaag atatagacat cctcaatcca
     1261 ggagtcacat tttttaagcg ggcgctttgc tattatcacc cgctcatccg gatttagcat
     1321 cgccgtaaat tgtacggtga cgtcatttgt cgtgttcagg tcacattgaa catctggtac
     1381 atcactgata taggggtcaa atccaaaatc agcaccacag gcacaaagac ggctaatggt
     1441 ggcggtatcg agggaaaatc ccggccatac tttgctggag gttaagccaa tatttaatgt
     1501 gacatcatat cgaagcaatc cctcaagacc gtcagcaccg acgaactttt ccccttcatc
     1561 cagggcctgg ttaataagtt gctgaacaat gccttcatcc cagtatgccg atttgcagtt
     1621 ggcaatcgta atatccacgc ctgtgaaggg atcagtaccg gcaaggcttg caaataatgt
     1681 attaactaat tccattttta ttatccagct ttaaggtagc gtcttataca tcgggacata
     1741 acctacatct tccaccaaac tctgtccctg cggcgttaaa aaccactcca acaatttttg
     1801 tgtctctgac gtcgtatttt cccgcgttac cataaaggca tcgatgatat agggatattt
     1861 gccgttgcga atgttttcgg cagtcggtgc aataccgtta atcgctagca gttttatatt
     1921 tttatcggcg ttcatttgtg ttgcgtaata acggaaggtg taacctattg cgttgtttgt
     1981 attacggtat tcggcaacga ctttaatcat tccctccatc atacttgcca cttctgtttc
     2041 ctgcggcgag atcatgcgga catttttcat gacctgggat tgcatcaccg tctggctacc
     2101 agagtcttcc gggcgttgct aggtctggat ctcctgatcg ttaccgccaa cagtacgcca
     2161 gttggtaatt gcaccactga agatgtcacg cacctgttgt tcagtcaggg aattaaccgg
     2221 attatccgca ttgacgatga aaacaaacgc ttcacgggca aaaggcgtgt acagcaaagt
     2281 aatgcccgat tcctcagcgc gttttttctg cccaccggaa ggttgcgcca caaaaataat
     2341 atcagcatca cctttaacaa tcctgttata cgcatcgggg gtacgagagc tctccagata
     2401 ttccctggtg tgaaaatctt ccggtataac gctcaaagca taaaatgcag aggcataaat
     2461 tgggtacgcc gccgtagcac catcgagtcg cggccagttt tgcgtaaact gaatttgcgg
     2521 tttaccacgc agtggtgtca gttgattatt gagtttatcg ggtcgccagg cccaggtatc
     2581 aatattttcg cgcacaccga cgccgggatt gagctgttta tataaataac cctgataacc
     2641 agcgacaaaa ccaagcatga gaaggataaa caggagggaa ttacggcaac gtagcccgga
     2701 tgtaccggtt aaaggatgtc tggttggccg gccgtacccc agcgaaaaac tgatatgcgc
     2761 gccaacgggt ataatgacta tccaccagta ctcacctccg actactgaga ctaacaaaac
     2821 gcccagccag gggagcataa gatcagccaa ccaacccgat cccatctggt gaaattgata
     2881 atctgccaga tgcagcgcga ttatccagcc aaccaggatt aataaaccgg gtactaaaaa
     2941 aagacattgt cgccagacgg ctatttctct tttttctggt gcactatcgc ctgcccatac
     3001 tcgccccgag aaaaatagca ttaatgcgcc cagcgccagc ataaaaatgt tgagcagaag
     3061 gtaacttgtt ggcgtgataa ggatattaca aacttcaata ataccggcaa gtccgacacc
     3121 cagcatagca acaaccgccg ccaaaaattg cgtcagtatg gggatgccga aaaaagtcat
     3181 taccagcgag gacaaaatcc attttctgtt ttgcattatt ctttccattc tttttgaatg
     3241 gtgaaattat actccccgag tccccttgcc ccttctggac acttttccga aatgatggcg
     3301 gaaaaaaacg ggaccctttg g
//
LOCUS       DAJVUK010000251         3217 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.255, whole genome shotgun sequence.
ACCESSION   DAJVUK010000251 DAJVUK010000000
VERSION     DAJVUK010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.255"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1000)
                     /locus_tag="OQQ57_004126"
     CDS             complement(<1..1000)
                     /locus_tag="OQQ57_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HCS1958667.1"
                     /translation="MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDD
                     ISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRR
                     DNNYQFIVTINSKNYGCSLDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWK
                     ISQYNVFDIKFETIINPQFADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFAT
                     GYLGIMTEGENFLCQLLTIEDEVLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQ
                     PYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSINENVHVLAGNHETN"
     gene            complement(1262..2852)
                     /locus_tag="OQQ57_004127"
                     /pseudo
     CDS             complement(1262..2852)
                     /locus_tag="OQQ57_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312389.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
BASE COUNT         1031 a          589 c          506 g         1091 t
ORIGIN      
        1 aattcgtttc atgatttcca gctaatacat gaacattttc attgatactc attatgcgtt
       61 ttaacaaatc gatgataaat tgatcgccac agatattact aaatcgatcg ccggtttggt
      121 cgcccagaaa cgtacatggc gtgactgcgt ctttattaat aactaaataa ggctgaagac
      181 tttctaaaac attatctctt ctgttcaggt tactgattat tgtattaata ttagtgtcaa
      241 gttgctcatt aaagttttcc cttagcaata cgttgagaac ttcatcttct atagtaagca
      301 actggcaaag gaaattttct ccttcagtca tgattcccaa atatcccgta gcaaaaagcg
      361 cgtacaaaac tgcaccaact gaaccatcgg tatccccaaa ataggtcggc ctggtacttg
      421 tgggatcaac aggtgaacaa ttggagaaat agattctgtc agcgaactgg gggtttataa
      481 ttgtttcgaa tttaatatca aatacattgt attgcgatat tttccagttc cagatgggtt
      541 tgtacgactc agtaactgca acatcattag cattatcatt tactgtcata ttattaagta
      601 aataaacaac actgcaccaa ttaacatcag tattatcaag agagcaaccg taatttttac
      661 tattaattgt cacaataaac tgataattat tatccctacg tagaatatga gcacgcatgc
      721 ccgatagcat actatatttt tctgaatgat ccgtttgtat ggtaaatgaa attttgtcat
      781 cttgaataga ttgttggaac cgttctattt gccaatcatc tattttttcc acaacctcac
      841 cgagcattgt cctggcaata cttgatatat catcacctat accatttgca atatacccaa
      901 acagttcttt agtgaagttg gtaacatgct cttgcaccat atcatttgtt gcgattgtcg
      961 ttgtactgtc gttagtgcct gccacagttc caattttcat cttttacctc atattattca
     1021 ccgcgaggaa tacatagtta acattttatc ttatgacata cacctcatgt tcgatggaaa
     1081 aataattata ttttgcacaa atcattcagc cttaaagcat aatatgaaat ttcttatttc
     1141 atagcagaga aagtccctaa agattgtaga ggcgtcatca gaacatgtct ctacaatcga
     1201 ttaagaaaac ctatgaaata ctggcaggat taaaaagata taccacagca ctcatggagt
     1261 tttaatgtgg ttgaaaacaa ctaagccctg ggacaccttt tttatcacca cgttcgttag
     1321 gagctatctt ccaggaattt agccccatgg tataattatc aattttttga tgctgatcta
     1381 cccctaatcc ataatggcca tatttctgtt tagttttttt gagcgtctgt ccacatttga
     1441 agatatcttc aggttttggt ctgaaagcag tagtgttatt aaaataattg tcatatacag
     1501 gtgtggatgc tatagcattg cttctaatta gatggataaa acgatcatcc atgtgttgtt
     1561 tatgtttttt attaaatata tttgctaatt cctcaggatc aattgggtct ttcatctgat
     1621 taaatggaac ctgcaaagca cctagacaat aacattcatt ttcttcattt cttattattc
     1681 cgtgatgact gcttaaaact ttcgtttctg agtcataatt acaaacatcg agcgttttaa
     1741 ttaagttata cgtatcaccg gcagagagtt tatgatttgc tagtcgtgca gtatagttac
     1801 cattgaaatt gatttcataa tttccagcca gaacgacgtc atttttattt atacgactat
     1861 ctttattact ctccatattc cgcatagaat ttagcaaagt aaggatatat ttatcaccaa
     1921 aaatagtact gaatctatcg cctgtatgat ccccaagaaa gatacaaggg gtaatcgcat
     1981 cgccttttaa aaaaacatgt tgatgcaact tattcaagat catgtctctc gtatctaata
     2041 aagtaaagag tttttccaat tttttatttt catatgcgaa tgaagccatg tcttcgtgtt
     2101 ttaataattc acataataaa ctccccccct tttccctgat acctatatgt cctgaaacga
     2161 gcaatgcata aagtacagcg ccaactcttc catctgtatc gccaaaataa gccgtgttgg
     2221 gattttgtgg gttaatcaca ccacactgtt tataaaaatc tatttttgaa aacacagaat
     2281 taacatagct agcaaactta tccttaggaa acgtctcttt agagacatcc caacgctagt
     2341 cagctttaaa attaccgcta agaagagtaa agaaattttc aggtatgata gaaaggccat
     2401 taactttata aattatgtct gatttatctc cggagaaact aataaaataa taaccatcct
     2461 tacactcaat cgtaacggta atgggagacg acaattttat tacatggtta ttgtctggta
     2521 taattgtaaa gataaacgtg tcagtagtat tatcggcgaa actattatat tcttgaatat
     2581 ctatagatgg ctcattattg taaaaccata tttttttcta tctgagaact atattcattt
     2641 accttccagc gaccatgttg caggaaatag atgatatgca ggcctaaatc gttatctatt
     2701 tgcgaatgtt tatccagctt atcaatttca actatctttg aacgatgttt tttatcaacc
     2761 ttgccatggt gttgatgatt gttaacttga tctgaatgct tatcttgatg gcttgaagag
     2821 atgtgcttaa atatattgtg aaatactttc ataaataacc cgcaatattt ataacttgtt
     2881 agtaacaaaa taaacgatac atgtctgaaa gacatattta cgacgataca aagtaataat
     2941 acttatatat ccgatgattt taagcaccga gactatccgg tcttttacta aataatggaa
     3001 aacaatccat ccctggaaga taattgaaaa aaacaacaga ataagaatta atcttaggat
     3061 aaacatttat ttatcatggc cttttgaacg ctgaaaagta gcgctctgta aagtaaaccc
     3121 cgctatagtt atgctatgca tttgtcttta atgatatctc gtcattgtat taacaggctg
     3181 aaattatcat taatgcacat ttcaatatta gcaggga
//
LOCUS       DAJVUK010000252         3201 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.256, whole genome shotgun sequence.
ACCESSION   DAJVUK010000252 DAJVUK010000000
VERSION     DAJVUK010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.256"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            200..940
                     /locus_tag="OQQ57_004128"
     CDS             200..940
                     /locus_tag="OQQ57_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HCS1958668.1"
                     /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(911..1678)
                     /locus_tag="OQQ57_004129"
     CDS             complement(911..1678)
                     /locus_tag="OQQ57_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HCS1958669.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV"
     gene            complement(1884..2462)
                     /gene="lpcA"
                     /locus_tag="OQQ57_004130"
     CDS             complement(1884..2462)
                     /gene="lpcA"
                     /locus_tag="OQQ57_004130"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HCS1958670.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            2702..>3201
                     /gene="fadE"
                     /locus_tag="OQQ57_004131"
     CDS             2702..>3201
                     /gene="fadE"
                     /locus_tag="OQQ57_004131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="functions in fatty acid oxidation; converts
                     acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HCS1958671.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFFA"
BASE COUNT          767 a          811 c          821 g          802 t
ORIGIN      
        1 aatcttagga aataaatgat acatgcgctt ttcggactat tgaaaactgc ccctgtgcta
       61 aatttgtaaa ccctgcgccg acaggcttgc gtaaaactct tttggtgata atgtgagcct
      121 tccaaatcca gactattccg atttgggatc cattttgccg tcctggcgtg tgtaaccgtt
      181 ttatcaagga ataagcagta tgcgtaaaat cgcattaatt cttgcgatgt tgttgatccc
      241 gtgcgtttcg tttgccggtt tgctgggcag cagtagctcg accacgccag tgagcaaaga
      301 gtataagcag cagttgatgg gatcccctgt ctacatccag atcttcaagg aagaacgtac
      361 gctcgatctc tacgtcaaaa tgggcgagca atatcagctg ctcgacagtt ataaaatctg
      421 taaatattcc ggcggcttag ggccaaaaca gcgtcagggc gatttcaaaa gcccggaagg
      481 gttttatagc gtccagcgta atcagttaaa accagacagc cgttactaca aagcgattaa
      541 tattggtttc cccaatgcct atgaccgtgc gcatggttat gaagggaaat acctgatgat
      601 ccacggcgat tgtgtttcca tcggctgcta cgcaatgacc aatcagggta ttgatgagat
      661 cttccagttc gttactggtg cgctggtgtt tggtcagccg agcgtgcaag tgagtattta
      721 cccgttccgc atgaccgacg ccaatatgaa gcgccataaa tattccaact ttaaggactt
      781 ctgggagcaa ctgaagccgg gttacgacta ctttgagcaa acccgtaagc caccgaccgt
      841 ttctgtggtc aatggtcgtt acgtggtcag caagccgtta agccacgaag ttgtgcagcc
      901 acaactggca tcaaactaca cgctccccga ggcaaaataa gcgccattcg cctggcataa
      961 tcttttgcca ggtttcattg cccgtcagcg gctgtgtcgc aatcaccgtg accacatcat
     1021 tcggtgtggt ctgcgagctg aagtcgattt ctacatcctg atccagcagc gttgccacgc
     1081 caaacggtgc gcggcgggtg atccagtgca gattcgtcga gcaatacgcc attacatagc
     1141 gcccatccga aagcagcatg ttgaaaacgc ccttctgccg cagttcgtcc gccagtgaag
     1201 cgatatattt aaacactgct gccatgttgc ccggcgtgcg cgggtaacgc tgcgttaatt
     1261 tatgcagcag ccagcagaag gctttttcgc tgtcggtttc gcctaccggg cggaagttgc
     1321 cggtttccag tgatttgtag cccgtcagtt gtccgttatg ggcataagtc cagttacgcc
     1381 cccataactc gcgggtaaat gggtgagtat tttccaacgc cacctcgccc cgattagcct
     1441 ggcgaatatg agccaccacc gaacaggatt ttatcgggta gtcctggaca agtttggcga
     1501 tgggggaatt aaagctgggt tgtggatctt taaatgtgcg acagccttta ccttcgtaaa
     1561 aggtaatgcc ccagccatct ttatgtggcc cggttccacc accacgctgt acaagtccgg
     1621 tgaaactaaa gcagatatcg gtagggacgt tggcgctcat cccgagcaat tcgcacatgg
     1681 gtaacctcca caacagcggg agcgcatggc ccccggcgaa gattgattta agaattttca
     1741 ggtcggatgc ggcgtaaacg aattattcgg cctacggttc gcgtacagat ttgtaggcat
     1801 gataagacgc gtcagcatcg catcaggcat cagcgcacaa gtgccggatg cggcgtaaac
     1861 gccttatccg gcctacgcca gacttactta accatctctt tttcaattaa ctggatcagg
     1921 atatggatca ctttaatgtg aatctcctga atgcggtcgg cataaccaaa gtgcggtacg
     1981 cgaatttcga tatccgccgt gccagccatt ttgccgccgt ctttaccggt cagggtgatc
     2041 actttcatcc ccttctcacg cgccgctgcg atcgctttga tcacgtttgc agagttaccg
     2101 gaggtggaga tccccagcag tacatcgcct tcgcgaccta ccgcttcaac gtagcgggag
     2161 aaaatatcat tgaaaccgaa atcattaccg acgcaggaaa tatgactaac gtcagaaata
     2221 gcaatcgccg ggtagcccgg acggttttca cggtagcgac cggtcaactc ttcggcaaag
     2281 tgcatagcgt cgcaatggga accgccgttg ccgcaggaaa gcactttgcc accggcttta
     2341 aagctgtctg ctaacaggac cgccgcgcgc tgaatggcgt gaatattggc gtcatctttt
     2401 aaaaagttag ccagcgtttc cgccgcttcg ttcagttcgt tacgaataag atcttggtac
     2461 atgaggatat ccttcagcat aaatgtaata gacaaaatgc agtgtaccgg ataccgccaa
     2521 aagcgagaag tacgggcagg tgctatgacc aggacttttt gacctgaagt gcggataaaa
     2581 acagcaacaa tgtgagcttt gttgtaatta tattgtaaat acattgctaa atgtatttac
     2641 atccactaca accatatcat cacaagtggt cagacctcct acaagtaagg ggcttttcgt
     2701 tatgatgatt ttgagtattc tcgctacggt tgtcctgctc ggcgcgttgt tctatcaccg
     2761 cgtgagctta tttatcagca gtctgatttt gctcgcctgg acagccgccc tcggcgttgc
     2821 tggtctgtgg tcggcgtggg tactggtgcc tctggccatt atcctcgtgc catttaactt
     2881 tgcgcctatg cgtaagtcga tgatttccgc gccggtattt cgaggtttcc gtaaggtgat
     2941 gccgccgatg tcgcgcactg agaaagaagc gattgatgcg ggcaccacct ggtgggaggg
     3001 cgacttgttc cagggcaagc cggactggaa aaagctgcat aactatccgc agccgcgcct
     3061 gaccgccgaa gagcaagcgt ttctcgacgg cccggtagaa gaagcctgcc ggatggcgaa
     3121 tgatttccag attactcatg agctggcgga tctgccgccg gagttgtggg cgtaccttaa
     3181 agagcatcgc ttcttcgcga t
//
LOCUS       DAJVUK010000253         3172 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.257, whole genome shotgun sequence.
ACCESSION   DAJVUK010000253 DAJVUK010000000
VERSION     DAJVUK010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.257"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            345..504
                     /locus_tag="OQQ57_004132"
                     /pseudo
     CDS             345..504
                     /locus_tag="OQQ57_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066419.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(722..2812)
                     /gene="iha"
                     /locus_tag="OQQ57_004133"
     CDS             complement(722..2812)
                     /gene="iha"
                     /locus_tag="OQQ57_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional siderophore receptor/adhesin Iha"
                     /protein_id="HCS1958672.1"
                     /translation="MRITTLASVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAA
                     SVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDG
                     VRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN
                     ADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSL
                     SDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGY
                     DRTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQPRE
                     LKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDE
                     WHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLH
                     KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSY
                     SINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSY
                     TPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKAW
                     TVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYSAGKSTLYAGDYFQTGSSTTGYV
                     IPERNYWMSLNYQF"
BASE COUNT          795 a          837 c          732 g          808 t
ORIGIN      
        1 gacctctcag taaatatcaa tacggttctg gcgagccgct tacgtgcagc agtcttatcc
       61 ggcagtttaa aggggaggac ggagaccaat gaggcactgg agcagattca gtgcagaggt
      121 gacctgcttt atcaaactta attgtgacaa aatggcgatt gagaaggtgc aattgactta
      181 tccggattcg gtcgtggcga ggtggtgccc ctgcattctg ctaaccgggt tatgagccag
      241 gagtcagcga tagacaaagg gacttatctg accgggcccc cggaaaaatg gcgggagaga
      301 atgatacctt cctgctgacg agaccggact ttgagatgac gagcgatagt gcggcagtga
      361 tgtacagcct gatcggtagc tgcaaaactt aacggaatcg agccggaaac gtggctacgc
      421 cacgtgatca gtgtaatcaa cacctggcct gccaaccgca tgaaagagtt gttgccctgg
      481 aacgtcactc tctctgtaaa ctaattttta ccccacgtcc ttcacggtgc gcttacactc
      541 tggacaagta tgtaaatgat aagttaaaaa taatccgtgc atttcctgtg acgatattag
      601 ttgttggtaa cgaaatctca ttagcggatc ggaaatgcac ttaacctaat acgttgccac
      661 tgttccgcca ggagttgcag tggcaacgta ttctaccgtc agtgatagcg ttttgttatt
      721 atcagaactg atagttcagc gacatccagt aatttcgctc aggtatcaca tatcctgttg
      781 ttgatgatcc cgtctggaag taatcaccgg catacagcgt actcttaccg gcactgtaca
      841 ggctcacgtc actgtaatcc ttgttgagca ggttattcac cgcagcattc agcgtcaggg
      901 catccgtcat cttccaggac agacctgcat ccaccaccgt ccaggctttc aggtattctc
      961 ctttctcatc atacactttc ttctgtacag cgctcagtga cgaataattc tgggtgaaac
     1021 gtggtgtttt cccgcgataa cgggcaccca gccatgatgc cacctcttcg gtgatctgcc
     1081 agttcagttt cgcattcacc atgtgttcag gggtataact cagcggcgca cctttgttat
     1141 caccatcacg ttgttcactt cgggtccagg tgtaattcag tgacagcgtg acatcctctg
     1201 accacagcgg caatgtgccg gcaaattcca caccgtgcaa ccgggccttt ccgctgttta
     1261 catagctatt ggtgttatca tttatggaat aagagacaat cttgttggag aagtcagtca
     1321 taaaacctgt gacattggca ttcagaccgg cggggttatc gtaatacacc ccagcctcat
     1381 aactgacgct ctcttccggc ttcaggtcgg ggttaccaag tagatttgtt tttccctgcc
     1441 cggacacacc actaatccct ttatgtagct gccccattct gggtgcctta tatcccgtgg
     1501 tcacaccgcc tttcagcgtc caggcatctg ccacatccca gaccagatat gcacgcggac
     1561 tgaagtgtcc cccgaattgc tcatgatgtt catagcggct gcccgcagtc agcgcaagtg
     1621 catccgtgag atgccactca tcctcagcaa ataccgacca gcttttctgc cggaaagttt
     1681 cacctgtgct ggcaaggaca actccgtctt tcatggacga gctctgaaac tcgcccccca
     1741 ccgtaaccag atgagattct cccagagggg taagcagtaa tgaattcagg ataaggttcg
     1801 attccttaag ctcccgcggc tgaccggcaa gcccccattt gtcgcgcttc agtacactgc
     1861 gtacgagctc acgaccttta ttttctgtct cgttccagtt cagatacgat ttccatgttc
     1921 cgaaggtgaa agtatgatca tagccagctg aaattttgtt ccgctcatag cgcagggtcc
     1981 ggtcatatcc ccccgtcaga ctccccagtt gcccatcccg gttatcataa cgctgccggg
     2041 tggtatccat atcaaaccag agcacatcct gctccgacgc cttccagtca agacgtgcac
     2101 caagattata attctgtgac tccgtgggat aaggaatacg cgtggctgct gtatcgctca
     2161 gtgatgtgac cgatgagccc tgacgctgtt gtgtgctacc gcgtacctgc aggctgacag
     2221 aatcatccac aagggggcca ctgctccaga aattaaactg gctgctgtta ccccatttgt
     2281 tgctttcctg cagattcagc cctgcattga cggaagagag ccatttgtct gcattctttc
     2341 tggtaatgat attcaccaca ccgcccatcg catcagagcc atacagtgtg gacatcggcc
     2401 ccctgataac ctcaatacgc tcaatggcgg ccagaggggg catgaacccg gtattcatgg
     2461 cagaaaaacc gttgggagtc acgtcactgc ttccgccctg acgaacacca tcaatcagta
     2521 tcagcgtgta actggctggc attcctcgga tgctgatttc cagcccaccg gttttacccg
     2581 taccactttc aacatccaca ccctctactg atctcagagc ctccgccaga tcgtggtact
     2641 ggctggactg caattcctcc tggctaatca cagaaacact ggcggctgcg ttagtcagct
     2701 ttttctcata gccggatgcc gagacaatca tcacatcctc tgcagcagct atgctgctgg
     2761 ctgaaaatcc gagacaggga atgactacgg aagccagagt ggttattcgc atattactaa
     2821 tctccgatca tgttaaccgg caagacaata cacaaacaca aacaataatg agaataattt
     2881 atatttgcct tttacaaaaa ataaagatta ttaacaaaac taaatataaa taacaactgc
     2941 ctcggcatgc cagttaacag ctatccgtat ggcgtgttcg gttttgcgaa taaaaaatgg
     3001 ttactgtaga agcggatttc caccacatgt caaccatgaa tggtcagtgg tgcgagacga
     3061 ctgggatgat ttggtcgatg acttcttccg gtgaatactg atagaaacat tgaaatattg
     3121 taagagaaag cgttcaaaat tctgtggcac gtgaaaaatt ctacagcgtc at
//
LOCUS       DAJVUK010000254         3147 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.258, whole genome shotgun sequence.
ACCESSION   DAJVUK010000254 DAJVUK010000000
VERSION     DAJVUK010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.258"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..908
                     /locus_tag="OQQ57_004134"
     CDS             <1..908
                     /locus_tag="OQQ57_004134"
                     /EC_number="2.7.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pseudouridine kinase"
                     /protein_id="HCS1958673.1"
                     /translation="ANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNK
                     AWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDM
                     NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCV
                     KVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVY
                     YSDISGENSWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS
                     CEYTNNPDLSIANVISLVENAERLN"
     gene            875..1834
                     /gene="psuG"
                     /locus_tag="OQQ57_004135"
     CDS             875..1834
                     /gene="psuG"
                     /locus_tag="OQQ57_004135"
                     /EC_number="4.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HCS1958674.1"
                     /translation="MVSGERRTSELKISPELLQISPEVQDALKNKKPVVALESTIISH
                     GMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEFELLGREGHNVTKVS
                     RRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQEL
                     ANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDS
                     ASEIARAMAVKWQSGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKES
                     TLFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG"
     gene            1928..3147
                     /locus_tag="OQQ57_004136"
                     /pseudo
     CDS             1928..3147
                     /locus_tag="OQQ57_004136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
BASE COUNT          757 a          710 c          852 g          828 t
ORIGIN      
        1 cggcgaatat tgatgtcgcc ggatattcac atgaatcatt aaattatgcg gattcaaatc
       61 caggtaaaat aaaatttacg cctggtggag tcgggcgcaa tattgcacaa aacctggcgt
      121 tgctggggaa caaagcctgg ctactgagcg ccgtaggcag tgacttttat ggtcaatcgc
      181 tgctaacgca aaccaatcaa tctggcgttt atgtcgataa atgcctgatt gtgccgggag
      241 aaaatacgtc tagttattta tcattactcg ataataccgg tgaaatgctg gttgctataa
      301 atgacatgaa tattagcaac gctattacag ctgaatatct cgcacagcac cgtgaattta
      361 ttcagagggc aaaggtcatt gtcgcggact gtaatatcag tgaagaggca ctggcatgga
      421 ttctggataa tgccgccaac gtacccgtat ttgtcgatcc ggtttccgca tggaaatgtg
      481 tcaaagtgcg cgaccgtcta aatcagatcc acactctgaa gccaaaccgc cttgaagcgg
      541 aaaccctgag tgggattgcg ctgtcagggc gtgaagatgt ggcaaaagtt gctgcctggt
      601 tccatcaaca tggcctgaac cgactggtat tgagcatggg cggcgacggc gtttattaca
      661 gcgatatcag cggtgaaaat agctggtctg cgccgatcaa aaccaatgtt attaatgtta
      721 ccggagcggg cgatgccatg atggcgggac ttgcttcgtg ttgggtagac ggaatgccgt
      781 ttgccgaatc tgttcgtttc gcacagggat gttcgtcaat ggcgctctcc tgtgaataca
      841 ccaataaccc cgatttatcg attgccaacg ttatatcgtt agtggagaac gcagaacgtc
      901 tgaattaaaa atttcccctg aattattaca aatttccccg gaagtgcagg acgctttaaa
      961 aaacaaaaaa ccggttgtgg cgctggaatc gaccattatt tctcacggga tgccgttccc
     1021 acaaaatgcc cagaccgcaa ttgaagtaga agaaactatt cgtaaacagg gcgctgtacc
     1081 tgccactatc gccattattg gcggcgtgat gaaagtgggt ttaagcaaag aagaatttga
     1141 attactgggt cgtgaagggc ataacgtgac caaagttagt cgtcgcgatt taccttttgt
     1201 tgttgccgcc ggaaaaaatg gcgcaaccac tgtggcttca acgatgatta ttgcggcgct
     1261 tgccggaatt aaagtatttg ccaccggggg aattggtggt gtgcatcgcg gggcggaaca
     1321 taccttcgat atttctgccg atttgcaaga actggcaaat actaatgtca ccgttgtttg
     1381 tgccggggcg aaatctattc tcgatttagg attaaccact gagtatttag aaaccttcgg
     1441 tgtgccgtta attggctatc agactaaagc gctgcctgcg tttttctgcc gtaccagctc
     1501 gtttgacgtc agtattcgtc tcgacagcgc cagtgaaatt gcccgtgcaa tggcggtgaa
     1561 atggcaaagc gggctgaacg gtggcctcgt ggtagcgaac ccgatcccgg aacagtttgc
     1621 gatgccggag gaatctatca atgcagccat agatcaagcc gtcgccgaag ccgaagagca
     1681 gggcgttatt ggtaaagaaa gtacactgtt cctgctggcg cgcgttgctg agctgaccgg
     1741 cggtgacagc ctgaaatcca atatccagct ggtattcaac aacgccattc tggcgagtga
     1801 aattgccaaa gaataccagc gtctcgcggg ttaatttccg acgggcagaa agccgtcgcc
     1861 cgtactcatc aagcatacca aaacctggcg ctgacgccgg gtttactggc atgaagggaa
     1921 aatcattatg gatataatga gaagtgttgt ggggatggtg gtgttactgg caatagcatt
     1981 tctgttgtca gtgaataaaa agagcatcag tttgcgcacg gttggagccg cactgctgct
     2041 gcaaatcgct attggtggca tcatgctcta cttcccaccg ggaaagtggg cagtagaaca
     2101 ggcggcatta ggcgttcata aagtgatgtc ttacagtgat gccggtaggc cttcattttt
     2161 ggttcgctgg ttgggccgaa aatggatgtc ctgtttgacg gtgcgggttt tatcttcgcc
     2221 tttcgcgtac ttccggcgat tattttcgtt actgcgctca tcagtctgct gtactacatt
     2281 ggcgtgatgg ggctgctgat tcgcatcctt ggcagcattt tccagaaagc tcttaacatc
     2341 agcaaaatcg aatcttttgt cgcagtcaca actattttcc tcgggcaaaa tgagatcccg
     2401 gcgatcgtta aaccgtttat cgatcgcatg aatcgcaacg agttgtttac cgcaatttgt
     2461 agcgggatgg cgtccattgc tggttcgatg atgattggtt atgccggaat gggcgtacca
     2521 attgactacc tgttagcggc atcgctgatg gcgatcccag gtggtatttt gtttgcacgt
     2581 attcttagcc cggccaccga gccttcgcag gtcacatttg aaaatctgtc gttcagcgaa
     2641 acgccgccaa aaagctttat cgaagcggcg gcgagcggtg cgatgaccgg gctgaaaatc
     2701 gccgctggtg tagcgacggt ggtaatggca tttgtcgcaa ttattgcgct gatcaacggc
     2761 attatcggcg gaattggtgg ctggtttggt ttcgccaatg cctctctgga aagtattttt
     2821 ggctatgtgc tggcaccgct ggcgtggatc atgggtgtgg actggagtga tgccaatctt
     2881 gcgggtagcc tgattgggca gaaactggcg attaacgaat tcgtcgctta cctgagtttc
     2941 tccccatacc tgcaaacggg cggcacgctg gaagtgaaaa ccattgcgat tatctccttt
     3001 gcgctttgtg gttttgctaa ctttggttct atcggtgttg tcgttggcgc attttcggct
     3061 atttcgccaa aacgcgcgcc ggaaatcgcc cagcttggtt tacgggcgct ggcagcagca
     3121 acgctttcca acctgatgag tgcgact
//
LOCUS       DAJVUK010000255         3145 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.259, whole genome shotgun sequence.
ACCESSION   DAJVUK010000255 DAJVUK010000000
VERSION     DAJVUK010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.259"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..142
                     /locus_tag="OQQ57_004137"
     CDS             <1..142
                     /locus_tag="OQQ57_004137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308592.1"
                     /note="activator of the allDC-ylbA operon involved in
                     allantoin utilization; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HCS1958675.1"
                     /translation="MRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNP
                     RS"
     gene            211..1305
                     /gene="mnmH"
                     /locus_tag="OQQ57_004138"
     CDS             211..1305
                     /gene="mnmH"
                     /locus_tag="OQQ57_004138"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HCS1958676.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRIDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR"
     gene            1421..1786
                     /locus_tag="OQQ57_004139"
                     /pseudo
     CDS             1421..1786
                     /locus_tag="OQQ57_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014543172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(2348..2797)
                     /locus_tag="OQQ57_004140"
     CDS             complement(2348..2797)
                     /locus_tag="OQQ57_004140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001348602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958677.1"
                     /translation="MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYI
                     NYMAIPENDGVFTWLPDFFSHVAVDISIYTNVEDDYFFSYFSLTNDDGGRFKKTLTVR
                     AREQVAKIVSKNDPDTKKVWCKYGKIPGQGDGVNLFLLVKLMLRIIL"
     gene            complement(2778..3145)
                     /locus_tag="OQQ57_004141"
                     /pseudo
     CDS             complement(2778..3145)
                     /locus_tag="OQQ57_004141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
BASE COUNT          841 a          726 c          713 g          865 t
ORIGIN      
        1 gatgcgccct ccttcgccat tgagtctggc atggcgcaaa tttggcagcg gcaaagcggt
       61 agaagatatt gtgaccttgt ttacccagcg caggccggaa atcagcggat ttttagaaat
      121 tttcggcaac ccacgcagtt aaaaatcaag tttccttgcg cgttggcgcg taaaatagcg
      181 cgcaagctga tttgaggttc acttttaact atgcaagaga gacacacgga acaggactat
      241 cgtgccctgc tgattgctga tacgcccatt attgatgttc gcgcccctat cgagtttgag
      301 caaggcgcaa tgcccgccgc tatcaatctg ccgttaatga ataacgatga acgcgccgcc
      361 gttggcacct gctataaaca gcaagggtca gacgcggcgc tggcgctggg gcataaactg
      421 gtggcgggtg aaattcgtca gcagcgcata gacgcctggc gggcagcgtg cctgcaaaat
      481 ccgcaaggta ttctctgctg tgcccgtggc ggtcaacgct cacatattgt gcaaagctgg
      541 ttgcatgcag cggggattga ttatccgctg gtggaaggcg gttataaggc actgcgccag
      601 accgcgattc aggcgactat tgaactggca caaaaaccga tagtgctgat tggcggttgt
      661 accggcagcg gtaaaacgct gttagtgcag caacagccga acggtgtcga tctggaaggg
      721 ctggcgcgtc atcgcggttc ggcgtttggt cgcacgttac aaccacaact tagccaggcg
      781 agttttgaaa atctgctggc tgccgaaatg ctaaaaaccg acgcccgtca ggatttgcgc
      841 ctgtgggtgc tggaagatga aagccggatg atcggttcga atcacctgcc ggaatgtctg
      901 cgcgagcgaa tgactcaggc ggcgattgcg gtggtagaag atccgtttga gatccgtctt
      961 gaacgcctga acgaagagta tttcttgcgt atgcatcatg attttaccca cgcgtacggc
     1021 gacgaacagg gctggcagga atattgcgaa tacctgcatc acggactttc ggctattaag
     1081 cgtcggctgg ggttacagcg ctataacgaa ctcgctgccc agctggatac ggcgctgaca
     1141 acgcaactca ccaccggcag caccgacggt catctggcct ggctggtgcc gttacttaaa
     1201 gaatattacg acccaatgta tcgctatcag cttgagaaaa aagcggaaaa agttgtcttt
     1261 cgcggtgagt gggcggaagt ggcggaatgg gttaaggcgc ggtaatgagg gacgtatttg
     1321 tattagtcgc gacttgatct gacacatggc cttgaaaggt tgagagttac cggttttgat
     1381 atgagtgtcg aatccttatc caaaacaaga ggtaactctc atgcttcata ctgccaatcc
     1441 cgtcatcaaa cacaaagccg gtttgctcaa tctggctgaa gaactcagca acgtatcaaa
     1501 agcctgtaaa atcatgggcg tttcgcgtga tacgttttat cgttaccgcg aactggtcgc
     1561 tgaaggcggt gtggatgcgc agattaatcg tagtcgccgc gctcctaacc ttaagaaccg
     1621 taccgatgag gcaactgaac aggctgttgt tgattacgcc gtcgctttcc cgacacatgg
     1681 tcagcaccgg gccagcaacg agctgcgtaa acaggggggt tttatctccg acagtggtgt
     1741 ccgttctgtc tggttactcc ataaccttga gaatctcaaa agacgatact gaacaaattt
     1801 tatcaggtga cgttccgtaa aaagttgtat ggagttctcg atgcagtcgg cgcgactatc
     1861 agtacccccg ctgaaccctg gactatcggg ccgccgtact ggggcatgtc accctggcgt
     1921 gccgctggtt ttccgctaat ggtttatttc ctctttcttt cccggcaaga atttatttta
     1981 atccggaagg attatttatt ttcagatagg gactcacatt aaacacgtaa cattttaatt
     2041 aatgcatggc tgaatatgta ttacacaatg tcagatatcg taaaagacca gtgcaattct
     2101 atgtaaactc tctgactgtt cattttattt gttgtttcag ggtcggaact caccctcaat
     2161 aaacaactga atacgagtag atattcatcg tctgagctat atggctttac acaatagccg
     2221 acatgtcttt tctcagtcag gaattttact tttcctcact acgaagttga cgacttcgat
     2281 atgggataga ctcttaattc aagcaattac tctgcacaag catcaggcaa tccagctcca
     2341 atatttgtta taaaataatg cgtaacatta atttcaccaa caaaaaaagg tttacaccat
     2401 ccccttgccc tggtatctta ccatatttac accacacttt ttttgtatct ggatcattct
     2461 ttgatacgat tttcgccact tgttccctgg ccctcactgt caatgttttc ttaaacctac
     2521 ccccatcatc atttgttagg gaaaaataag aaaaaaaata atcatcttct acatttgtgt
     2581 atattgatat atccaccgct acgtgcgaaa aaaaatctgg gagccatgta aaaactccat
     2641 cattttctgg tattgccata tagtttatgt aatgtttact tacaagagat tcatctttgt
     2701 ataaataaag ataagtaatt acgcataaaa caacaatgat tataatagca aaaataaata
     2761 ttatcatctt tgatagatta cttgagatag ccagcatctt gtaaagcctt tatcgttttt
     2821 ttatgctctg gattaatata atcactacat ctatctgagc aatctgttgt tgatggacat
     2881 gtcaacccat ggtcatttac agccaagtct tttttattat cttcaatcat ttcagaatgg
     2941 gatagcttta cttttctgcc gtacataccg aacagattta atccgtaatc tctaatctct
     3001 ttttcataac ccagcccttt cgccgatcgg ctaacaccag cgtcatttaa tttagacact
     3061 cgacaaaatg ccatacaatg gaaaaattga tcagtcccac ctaaatttaa tctcttcata
     3121 agtatcagat aatatatccc atgct
//
LOCUS       DAJVUK010000256         3143 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.260, whole genome shotgun sequence.
ACCESSION   DAJVUK010000256 DAJVUK010000000
VERSION     DAJVUK010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.260"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..325
                     /locus_tag="OQQ57_004142"
     CDS             <1..325
                     /locus_tag="OQQ57_004142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HCS1958678.1"
                     /translation="KQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDF
                     TFHDLKAKGISDYEGSSRDKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPSNST
                     CDFCH"
     gene            complement(353..442)
                     /locus_tag="OQQ57_004143"
     tRNA            complement(353..442)
                     /locus_tag="OQQ57_004143"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(406..408),aa:Ser,seq:cga)
     gene            536..1333
                     /gene="mtfA"
                     /locus_tag="OQQ57_004144"
     CDS             536..1333
                     /gene="mtfA"
                     /locus_tag="OQQ57_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HCS1958679.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH"
     gene            1434..1509
                     /locus_tag="OQQ57_004145"
     tRNA            1434..1509
                     /locus_tag="OQQ57_004145"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1467..1469,aa:Asn,seq:gtt)
     gene            1823..3143
                     /locus_tag="OQQ57_004146"
                     /pseudo
     CDS             1823..3143
                     /locus_tag="OQQ57_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416485.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta domain-containing
                     protein"
BASE COUNT          829 a          745 c          741 g          828 t
ORIGIN      
        1 aaaacagtta ccaacatccg cctatgtaat cagcaatcaa tacggcaacc gatatatgta
       61 caaaggcttt aacgaaatgt gggtagaagc aagaaatcgc gcaggcaaaa tttcaggtat
      121 tttaaccgac ttcacctttc atgatctgaa ggcgaaagga atttcagact atgaaggaag
      181 cagtcgggat aagcaacttt tctctggtca caaaaccgag gggcaagtgc taatctatga
      241 caggaaggtt aaagtttcac cgacacttga tgtcccgtta cctgaaaata ttccaagtaa
      301 ttccacgtgt gatttttgtc actgacttaa tgatgtataa gtgattgaat tttggcggag
      361 agagggggat ttgaaccccc ggtggagttg cccccactcc ggttttcgag accggtccgt
      421 tcagccgctc cggcatctct ccgttcagat ggttgccatg atgccaggaa atttggcatt
      481 ttaacagtcc ctgtccgtgc aattttgttc aagtgacgag tttgcgagca aaacgatgat
      541 taagtggccc tggaaagtac aagaatcagc acatcaaact gcccttccct ggcaggaagc
      601 actatcgatc ccccttttaa cgtgtctgac ggaacaggaa caaagcaaat tagtcactct
      661 tgccgaacgt tttttacagc aaaagcggct tgttccttta cagggctttg aactggattc
      721 attaagaagc tgccggatag cacttctatt ttgcctaccc gttctggagt taggactgga
      781 atggctggat ggttttcatg aagtcttaat ttatcctgcg ccatttgtgg tcgatgatga
      841 atgggaagac gatatcggtc tggtgcataa ccaacgtatt gttcagtcag gtcagagctg
      901 gcagcaaggg cctatcgttt tgaactggtt ggatatacaa gattcttttg atgcttctgg
      961 ttttaacctg attattcatg aagtcgctca taagctggac acccgtaacg gcgatcgcgc
     1021 cagcggagtt ccctttattc cgttgcgtga ggttgctggc tgggaacacg atcttcatgc
     1081 tgcaatgaac aacattcagg aagaaatcga attggttggc gagaatgcgg cgagcattga
     1141 tgcttatgca gccagcgatc ctgctgaatg ttttgccgta ctttctgaat atttctttag
     1201 cgccccagaa ctttttgctc ctcgtttccc ttcattgtgg caacgtttct gccaatttta
     1261 tcaacaagat cctttgcaga gactgcatca cgctaatgat acagactcgt tttcggcgac
     1321 gaatgttcat taattaacaa ctttgcatat taattaacca attgaaatga cttatgaaat
     1381 ttagtgttga cagacaaggt accgctaagt aatatgcgcc ccgttcacac gattcctctg
     1441 tagttcagtc ggtagaacgg cggactgtta atccgtatgt cactggttcg agtccagtca
     1501 gaggagccaa attctaaaaa ttcgcttttt tagcgcaatg tcactgacct tagttgaaca
     1561 ttgtttttta acggatagcg ggtttttaac atcttaagcg ccctcgacct ttatggttga
     1621 gggcgttttg ctatgaacgc catcaccatt ttcccctcga ttataaaact tgagttattc
     1681 agtagtctcc cctcttgcaa ctcacaccca aaactgccta acgaaaagtt attaattttc
     1741 aatcatattg ctatcagtat ttacattttt tcgctgtgct agaaagggcg catttatgtt
     1801 agctcgttca gggaaggtaa gcatggctac gaagaagaga agtggagaag aaataaatga
     1861 ccgacaaata ttatgcggga tgggaattaa actacgccgc ttaactgcgg gtatctgtct
     1921 gataactcaa cttgcgttcc ctatggctgc ggcagcacaa ggtgtggtaa acgccgcaac
     1981 ccaacaacca gttcctgcac aaattgccat tgcaaatgcc aatacggtgc cctacatcct
     2041 tggagcgctg gaatcggccc aaagcgttgc cgaacgtttc ggtatttcgg tggctgagtt
     2101 acgcaaactc aaccagtttc gtacgtttgc tcgaggtttt aataatgtcc gccagggtga
     2161 tgaactggat gtcccggcac aagttagtga aaaaaaatta accccgccgc cgggtaatag
     2221 cagtgacaac ctcgagcaac agatagccag tacttcacag caaatcgggt ctctgctcgc
     2281 cgaagatatg aacagcgagc aagcggcaaa tatggcgcgt ggatgggcct cttctcaggc
     2341 ttcaggcgca atgacagact ggttaagccg cttcggtacc gcaagaatca cgctgggcgt
     2401 ggatgaagat tttagcctga agaactccca gttcgatttt ctccatccgt ggtatgaaac
     2461 gcctgataat ctctttttca gtcagcatac tctccatcgt actgacgagc gtacgcagat
     2521 taacaacggc ttaggttggc gtcatttcac tcccacatgg atgtcaggca tcaacttctt
     2581 tttcgaccac gatcttagcc gttaccactc ccgcgccggc attggcgcgg agtactggcg
     2641 cgactatcta aaattaagca gtaacggcta tttgcgactg accaactggc gcagcgcacc
     2701 tgaactggac aacgattatg aagcacgccc ggccaatggc tgggatgtac gcgcagaaag
     2761 ctggctaccc gcctggccgc accttggcgg taaactggtc tatgaacagt attatggcga
     2821 tgaagtggcc ctgttcgata aagacgatcg gcaaagtaat cctcatgcca taaccgctgg
     2881 acttaactat acccccttcc cgctgatgac cttcagcgcg gagcaacgct agggtaaaca
     2941 gggcgaaaat gacacccgtt ttgccgtcga ttttacctgg caacctggca gcgcaatgca
     3001 gaaacagctt gacccgaatg aagtcgctgc acggcgtagc cttgcaggca gccgttatga
     3061 tctggtggat cgcaacaaca atatcgttct ggaatatcgc aaaaaagaac tggttcgcct
     3121 gaccctgaca gaccccgtga cag
//
LOCUS       DAJVUK010000257         3114 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.261, whole genome shotgun sequence.
ACCESSION   DAJVUK010000257 DAJVUK010000000
VERSION     DAJVUK010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.261"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            80..2983
                     /locus_tag="OQQ57_004147"
     rRNA            80..2983
                     /locus_tag="OQQ57_004147"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          827 a          681 c          965 g          641 t
ORIGIN      
        1 gaacaacgaa agttgttcgt gagtctctca aattttcgca acacgatgat gaatcgtaag
       61 aaacatcttc gggttgtgag gttaagcgac taagcgtaca cggtggatgc cctggcagtc
      121 agaggcgatg aaggacgtgc taatctgcga taagcgtcgg taaggtgata tgaaccatta
      181 taaccggcga tttccgaatg gggaaaccca gtgtgattcg tcacactatc attaactgaa
      241 tccataggtt aatgaggcga accgggggaa ctgaaacatc taagtacccc gaggaaaaga
      301 aatcaaccga gattccccca gtagcggcga gcgaacgggg agcagcccag agcctgaatc
      361 agtgtgtgtg ttagtggaag cgtctggaaa ggcgtgcgat acagggtgac agccccgtac
      421 acaaaaatgc acatattgtg agctcgatga gtagggcggg acacgtggta tcctgtctga
      481 atatgggggg accatcctcc aaggctaaat actcctgact gaccgatagt gaaccagtac
      541 cgtgagggaa aggcgaaaag aaccccggcg aggggagtga aaaagaacct gaaaccgtgt
      601 acgtacaagc agtgggagca cgcttaggcg tgtgactgcg taccttttgt ataatgggtc
      661 agcgacttat attctgtagc aaggttaacc gaatagggga gccgaaggga aaccgagtct
      721 taactgggcg ttaagttgca gggtatagac ccgaaacccg gtgatctagc catgggcagg
      781 ttgaaggttg ggtaacacta actggaggac cgaaccgact aatgttgaaa aattagcgga
      841 tgacttgtgg ctgggggtga aaggccaatc aaaccgggag atagctggtt ctccccgaaa
      901 gctatttagg tagcgcctcg tgaattcatc tccgggggta gagcactgtt tcggcaaggg
      961 ggtcatcccg acttaccaac ccgatgcaaa ctgcgaatac cggagaatgt tatcacggga
     1021 gacacacggc gggtgctaac gtccgtcgtg aagagggaaa caacccagac cgccagctaa
     1081 ggtcccaaag tcatggttaa gtgggaaacg atgtgggaag gcccagacag ccaggatgtt
     1141 ggcttagaag cagccatcat ttaaagaaag cgtaatagct cactggtcga gtcggcctgc
     1201 gcggaagatg taacggggct aaaccatgca ccgaagctgc ggcagcgacg ctgatgcgtt
     1261 gttgggtagg ggagcgttct gtaagcctgt gaaggtgtgc tgtgaggtat gctggaggta
     1321 tcagaagtgc gaatgctgac ataagtaacg ataaagcggg tgaaaagccc gctcgccgga
     1381 agaccaaggg ttcctgtcca acgttaatcg gggcagggtg agtcgacccc taaggcgagg
     1441 ccgaaaggcg tagtcgatgg gaaacaggtt aatattcctg tacttggtgt tactgcgaag
     1501 gggggacgga gaaggctatg ttggccgggc gacggttgtc ccggtttaag cgtgtaggct
     1561 ggttttccag gcaaatccgg aaaactaagg ctgaggcgtg atgacgaggc actacggtgc
     1621 tgaagcaaca aatgccctgc ttccaggaaa agcctctaag catcaggtaa catcaaatcg
     1681 taccccaaac cgacacaggt ggtcaggtag agaataccaa ggcgcttgag agaactcggg
     1741 tgaaggaact aggcaaaatg gtgccgtaac ttcgggagaa ggcacgctga tatgtaggtg
     1801 aagtccctcg cggatggagc tgaaatcagt cgaagatacc agctggctgc aactgtttat
     1861 taaaaacaca gcactgtgca aacacgaaag tggacgtata cggtgtgacg cctgcccggt
     1921 gccggaaggt taattgatgg ggtcagcgca agcgaagctc ttgatcgaag ccccggtaaa
     1981 cggcggccgt aactataacg gtcctaaggt agcgaaattc cttgtcgggt aagttccgac
     2041 ctgcacgaat ggcgtaatga tggccaggct gtctccaccc gagactcagt gaaattgaac
     2101 tcgctgtgaa gatgcagtgt acccgcggca agacggaaag accccgtgaa cctttactat
     2161 agcttgacac tgaacattga gccttgatgt gtaggatagg tgggaggctt tgaagtgtgg
     2221 acgccagtct gcatggagcc gaccttgaaa taccaccctt taatgtttga tgttctaacg
     2281 ttgacccgta atccgggttg cggacagtgt ctggtgggta gtttgactgg ggcggtctcc
     2341 tcctaaagag taacggagga gcacgaaggt tggctaatcc tggtcggaca tcaggaggtt
     2401 agtgcaatgg cataagccag cttgactgcg agcgtgacgg cgcgagcagg tgcgaaagca
     2461 ggtcatagtg atccggtggt tctgaatgga agggccatcg ctcaacggat aaaaggtact
     2521 ccggggataa caggctgata ccgcccaaga gttcatatcg acggcggtgt ttggcacctc
     2581 gatgtcggct catcacatcc tggggctgaa gtaggtccca agggtatggc tgttcgccat
     2641 ttaaagtggt acgcgagctg ggtttagaac gtcgtgagac agttcggtcc ctatctgccg
     2701 tgggcgctgg agaactgagg ggggctgctc ctagtacgag aggaccggag tggacgcatc
     2761 actggtgttc gggttgtcat gccaatggca ctgcccggta gctaaatgcg gaagagataa
     2821 gtgctgaaag catctaagca cgaaacttgc cccgagatga gttctccctg actccttgag
     2881 agtcctgaag gaacgttgaa gacgacgacg ttgataggcc gggtgtgtaa gcgcagcgat
     2941 gcgttgagct aaccggtact aatgaaccgt gaggcttaac cttacaacgc cgaaggtgtt
     3001 ttggcggatg agagaaagat tttcagcctg atacagatta aatcagaacg cagaagcggt
     3061 ctgataaaac agaatttgcc tggcggccgt agcgcggtgg tcccacctga cccc
//
LOCUS       DAJVUK010000258         3088 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.262, whole genome shotgun sequence.
ACCESSION   DAJVUK010000258 DAJVUK010000000
VERSION     DAJVUK010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.262"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..192)
                     /locus_tag="OQQ57_004148"
     CDS             complement(<1..192)
                     /locus_tag="OQQ57_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HCS1958680.1"
                     /translation="MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQR"
     gene            385..887
                     /locus_tag="OQQ57_004149"
                     /pseudo
     CDS             385..887
                     /locus_tag="OQQ57_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(933..1349)
                     /gene="rraB"
                     /locus_tag="OQQ57_004150"
     CDS             complement(933..1349)
                     /gene="rraB"
                     /locus_tag="OQQ57_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HCS1958681.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            1511..2515
                     /gene="argF"
                     /locus_tag="OQQ57_004151"
     CDS             1511..2515
                     /gene="argF"
                     /locus_tag="OQQ57_004151"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HCS1958682.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIAETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
     gene            complement(2587..3069)
                     /locus_tag="OQQ57_004152"
     CDS             complement(2587..3069)
                     /locus_tag="OQQ57_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958683.1"
                     /translation="MIWDKLVAYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILV
                     NDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYV
                     VEIFEEKMGNELKIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIKKLGWNN
                     "
BASE COUNT          864 a          703 c          659 g          862 t
ORIGIN      
        1 tcgttgtccg ttaacttcca tattagcata gagataacgc ttacatttca ttaatgccca
       61 tggtaaatag atacctagcg ttataatcgt taacaacaca ttcaccacac aaataagaaa
      121 atatctctca cctgtaccat gaaaaacaaa cgaatgggac ggaacatcca tttcattaat
      181 aacttgagcc ataaaaattc cctgaattaa aaaatccatt gatataattt atatatacag
      241 acagtaaaat gttctgccac gttacaatac tcttatcagt aataggctgg caaaaacttt
      301 attgctttat aagatgcttg cgcacgtaag aagagagtgg tattaaacaa atgtataatt
      361 actttatttt tattgggtta aactatgaat aacattgcgc cgcaatcacc tgtaatgcgt
      421 cgcctgacgc tacaggataa tcctgctatt gcccgcgtca ttcgtcaggt atccgccgaa
      481 tacggtctta ccgctgataa aggctacacc gtcgccgatc cgaatcttga cgaactgtat
      541 caagtgtata gtcagccggg tcatgcatat tgggtggttg agtacgaggg tgaagtggtc
      601 ggcggcggtg ggattgcgcc attagcaggt agtgaatcgg acatttgcga actgcaaaag
      661 atgtattttc ttccggctat tcgcggtaaa gggctggcga aaaaactggc cttaatggcg
      721 atggagcagg cacgagagat gggcttcaaa cgctgctatc tggaaacgac cgctttttaa
      781 aggaagccat tgcgctttat gagcatttgg gctttgagca tatcgactat gcacttggct
      841 gcacgggcca tgttgattgt gaagtgcgga tgttgcgcga actctaaaaa aatgcccgct
      901 agtgtgtgct atcgggcatt ttaatcaatt aattagtggc gaaccccgtc atcgtcttca
      961 tcgacaaaat cttcatcgtc gccgtcttcg ccattaggat cttcaaaata agtgccccaa
     1021 ccgtcgtact caacgtcaaa tttctccgcc aatgtcatca gttgttcaac ctgggcatcg
     1081 atcagatcgg cattcaacgc gcactcgctg aggatgtcgc agcaaatcac gatatcacca
     1141 tcttcaactt ccagctcttc tggatcggtc acttcgtaac cgagtttaaa cgcttcaact
     1201 gctgcttttt ccagggtttc cagatcgtct gcggaaagat ggtgttcgat ggtgtacagc
     1261 gcgtccggat cgctgccatc ttccagtaat tcttcaataa tcaaacgagt ttcttcacgc
     1321 tgttcttcca gttgttccgg gtttgccatg gctcattcct cttaatgtcc tgccgatact
     1381 cttattgtca cataccactg acattgcctc cacctttgtg acaaagattt atgcttcaga
     1441 cttgcaaatg aataatcatc catataaatt gaattttaat tcattgaggc gttagccaca
     1501 ggagggatct atgtccgggt tttatcataa gcatttcctg aaattactcg atttcacgcc
     1561 agctgaactc aacagcctgc tgcagttagc cgcgaagctg aaagccgata agaaaagcgg
     1621 caaagaagaa gccaaactca ctggtaaaaa catcgcgctc atcttcgaaa aagactcgac
     1681 ccgtacccga tgctctttcg aagttgccgc atatgaccag ggtgctcgcg ttacttatct
     1741 cggcccaagc ggcagtcaga ttggtcataa agagtcgatt aaagacactg cccgcgtgct
     1801 gggtcgcatg tatgacggta ttcagtatcg cggctatggt caggagattg ccgaaacact
     1861 ggcggaatac gctggcgtgc cggtatggaa cggcctgacc aatgagtttc accccacgca
     1921 gttgctggcg gatctcctca ccatgcagga gcatttaccc ggtaaagcat tcaacgaaat
     1981 gacgctggtc tatgcaggtg acgcacgtaa caacatgggc aattcgatgc tcgaagctgc
     2041 ggcgcttacc ggtctggatt tgcgtctggt cgcgccacag gcatgctggc cggaagctgc
     2101 gctggttacg gaatgccgcg ccctggcaca gcaaaatggc gggaatatta cgctgacgga
     2161 agatgtagcc aaaggagttg aaggtgctga ctttatctat accgatgtat gggtgtcgat
     2221 gggggaagca aaagagaaat gggcagaacg gattgcatta ctgcgtgatt atcaggtgaa
     2281 cagcaagatg atgcagttga ccggtaaccc ggaggtcaaa ttcctccact gcctgcccgc
     2341 gtttcatgac gaccagacga cgcttggtaa gaaaatggcg gaagagtttg gcctacatgg
     2401 cggaatggaa gtgactgatg aggtcttcga atctgccgcc agcattgttt ttgatcaggc
     2461 ggaaaaccgc atgcatacca tcaaagcggt gatggtcgcg acgctcagta aataattgat
     2521 atcgcaataa agatgccggg aaatacaaaa acatcccggc atcacattat tttatgcagt
     2581 aatagttcaa ttattccacc ccaatttttt tattgctata cgtaaatctt ccggaggatt
     2641 taatttttct aactgttctt tattaatata ttcacatata tttattttcc catcccggag
     2701 gatttccatc attcttgttc taatttttaa ttcattaccc atcttttctt caaaaatctc
     2761 aacgacataa cccggattgt tatttacaat ttcatttgtt ttttcttcat taccataaac
     2821 atatcctaac tcattaagat acagctgttc gccctcatac ttcttaagta attgatagaa
     2881 gtaccacttc gcaaaatcag gttgcttcat gaaaaaatcc ttcaaaaaaa tatcatttac
     2941 taaaatgctg acaggcactt cattaaatag caacttaaca tcatcaaata accttagtat
     3001 taagcgtgat ttttcttgat tgcttaagtt aaaatcattg acatatgcaa ccaacttatc
     3061 ccaaatcaat tcctgtaatt tacggcta
//
LOCUS       DAJVUK010000259         3067 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.263, whole genome shotgun sequence.
ACCESSION   DAJVUK010000259 DAJVUK010000000
VERSION     DAJVUK010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.263"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..923)
                     /gene="curA"
                     /locus_tag="OQQ57_004153"
     CDS             complement(<1..923)
                     /gene="curA"
                     /locus_tag="OQQ57_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HCS1958684.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR
                     TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSHVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGGAGGAEKCRHAIEVLGFDVCLDHHAGDFAEQLVKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQDYGHRIHEFQKEMGQWVKEDK"
     gene            1104..1622
                     /gene="mddA"
                     /locus_tag="OQQ57_004154"
     CDS             1104..1622
                     /gene="mddA"
                     /locus_tag="OQQ57_004154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HCS1958685.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            1619..2068
                     /locus_tag="OQQ57_004155"
     CDS             1619..2068
                     /locus_tag="OQQ57_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1958686.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
     gene            complement(2069..2302)
                     /locus_tag="OQQ57_004156"
     CDS             complement(2069..2302)
                     /locus_tag="OQQ57_004156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HCS1958687.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(2388..2561)
                     /gene="ortT"
                     /locus_tag="OQQ57_004157"
     CDS             complement(2388..2561)
                     /gene="ortT"
                     /locus_tag="OQQ57_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orphan toxin OrtT"
                     /protein_id="HCS1958688.1"
                     /translation="MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW
                     PMSFPVALLFSLF"
     gene            2756..2851
                     /gene="yncL"
                     /locus_tag="OQQ57_004158"
     CDS             2756..2851
                     /gene="yncL"
                     /locus_tag="OQQ57_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HCS1958689.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
BASE COUNT          744 a          787 c          715 g          821 t
ORIGIN      
        1 attttatcct ctttcaccca ttgccccatc tccttctgaa actcatggat gcggtgacca
       61 taatcctgag cgataataaa cccttgcaag cgaatacgtt ttttcagcac cgttgccatc
      121 aacaggggta aacgatccgg accgggtggt agctctgtag cgttatagct gctcactaag
      181 ccacaaacgg gaatgcgcgc agatgtatta agtaatggta gcactgcatc aaatacctta
      241 ccgcccacgt tttcataata gatatcaata ccttttgggc acgctttcac cagttgttcg
      301 gcaaaatcac ccgcgtggtg atcaagacaa acatcgaagc ccagcacctc gatagcatgg
      361 cggcattttt ccgcgccacc ggcccccccc accaccctgc aacctttaag tttgccgatt
      421 tgccccaccg ttgctcccac aggacctgtc gccgcagcta ccaccaacgt ttcgccctct
      481 ttaggctgac cgatatccag cagccccata taagcggtaa agcctggcat ccccagcaca
      541 cccagcgacc acgatggatt ttgcggatga tcgccaagtt tcaccagatc atcaccactg
      601 gatatgtcat agtcctgcca tccactgtag cccagcaccc agtcgccagg ctgataatca
      661 ggatgattcg actccacaac atggctcacc gtgccgccga ccatcacgcc gccaatatca
      721 acaggcggtg aataagatgg ctcatcgctc atacgtccac gcatatacgg gtccagggac
      781 aaataaactg tgcgcagtaa cacctgtcct tcacccggtg tggcgacatc atcttcttca
      841 agacggaaat tctccggaac cggtgcgcca tgtggacgcg aggccagaac ccaacgtcga
      901 ttacgctgct tttgttgccc cataatgctc tcctatgctt ttggcatgaa tccatcaata
      961 gtagcaggct cacgggattg gttttgtttg cagccgtcac atcccctctg caacacgcaa
     1021 taatttcatc gaggaatccg ttgcttcggg ctgttttcga tagtattgat aacatcatca
     1081 tcattatttt atcgaggcca gacatgtcca tccgttttgc ccgcaaagcc gattgtgctg
     1141 ccattgcgga aatttataac cacgccgtgt tgtatacggc ggctatctgg aatgaccaaa
     1201 cggttgatgc agataaccgc attgcctggt ttgaagcgcg gaccatagca ggttatccgg
     1261 tgctggtaag tgaagaagat ggcgtagtga cgggatatgc ctcgtttggc gactggcgta
     1321 gtttcgatgg ttttcgccat accgtggaac attcggttta tgtccatccc gatcatcagg
     1381 gcaaaggtct ggggcgtaaa ttgttaagcc gattgattga tgaagcgcgg gatagcggga
     1441 agcatgtcat ggtcgccggg atcgaatcgc aaaatcaggc ctcgctgcat ctgcaccatt
     1501 cgctgggatt tgtcgtcacc gcacaaatgc cgcaggtggg cactaaattt gggcgctggc
     1561 tggatctgac atttatgcag ttgcaactcg acgaacgcac tgaaccggac gcgattggat
     1621 gaatcagtcg ctcacccttg cttttttgat tgccgccgga attggtctgg tagtccagaa
     1681 cacgctgatg gtgcgcatca cccagacctc ctctaccatt ctcatcgcca tgttgctgaa
     1741 ctcactggtg gggattgtgc tctttgtttc tattttatgg tttaaacaag gcatggcggg
     1801 gtttggcgaa ctggtgtcca gcgtgcgctg gtggacactt atacccggct tgctgggatc
     1861 gttttttgtc ttcgccagta tcagcggata tcagaatgtg ggagcggcga caactattgc
     1921 agtactggtc gccagccagc taattggcgg tctgatgctg gatatcttcc gcagtcatgg
     1981 cgtaccacta cgggcgttgt tcggcccaat ttgtggcgca attttacttg tggttggcgc
     2041 ctggttggta gccagacgct cattttaatc agaggatggt gccgcctttg gttaactgtt
     2101 cgtggcgcgc ttccatatct tctttatgct tgcgaccgtg atgagcaata gcggtgcgca
     2161 aacgctgctg ctgggtgtag cgatcttccc gacttaactc cgcgtcatcg ctcagggcga
     2221 ttaataattc gttcatatgg gcaatgacgc tctcttcaat cgcggcatcc acgcgcgcga
     2281 tgacttcatc cagatgcgac atactttctc cttaaccact tgtgaaattt atcgattcat
     2341 ccaaatgata taagtctgcg tggtgccgtc aagccagtga gtaagattta aaacagtgaa
     2401 aacaacagcg ccaccgggaa actcatcggc catgttgccc ccaccagaaa ggcgcttaag
     2461 aaacggatgc gtttcttatc gtgagaaaga aaccaggtga taagaaatgc gattgctgcc
     2521 ataaccgcat aaaaaacaag catatgttga tagagagaca tgtacgggcg tccagccaga
     2581 tgaataaaac gcgcgcaaat atgcgtcatt ttttgacgtg catcaagttt tttcaccagt
     2641 ttgagaaaaa atcatcaaac agcaacttgc ccttatccat cttcagaatg agtattattg
     2701 cggattttct taacccgtac tatacacata ggggcaatga taaaaggtgg caaaaatgaa
     2761 tgtttccagt agaactgtag tactgataaa tgtctttgct gctgttggtt tgtttactct
     2821 tatctctatg agatttggct ggtttatttg atgtagtgat tttgcacgca gcacgtactg
     2881 tcagagaaat caactctctg acagtacgca agatcttctc atactctcca ggtttacaac
     2941 attatcctta atatttactt ctttttgctg gcatctacat tgaaatgagt agaaaacatc
     3001 cccctactgt cgtctataca aacagcttac tgattcaaac ggaatcttgt tttcacattt
     3061 ttctatc
//
LOCUS       DAJVUK010000260         2921 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.264, whole genome shotgun sequence.
ACCESSION   DAJVUK010000260 DAJVUK010000000
VERSION     DAJVUK010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.264"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            555..1271
                     /locus_tag="OQQ57_004159"
     CDS             555..1271
                     /locus_tag="OQQ57_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958690.1"
                     /translation="MNDNSLLRNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVG
                     AGLDDVARSLLYAIIVMGILFTGWGIGILFFLLIKKRSKIQDLSFFRLFFAITLLFFP
                     VIFELLILKQYFILPLSLSCIISSLVISIIIRIYGRIFSVSCFSDIPFVREHRIKLIM
                     AGFLVYFWLFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSSFKDDSNRF
                     LIFNTEQSGFYEINDVYVRK"
     gene            1823..2227
                     /locus_tag="OQQ57_004160"
     CDS             1823..2227
                     /locus_tag="OQQ57_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958691.1"
                     /translation="MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGP
                     YGVYFRVVPHPPGGKSWVECNSDYYYSDKPPGVQILGTRAGCRVYGICGTTSTLHVAG
                     RGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM"
     gene            2290..2921
                     /locus_tag="OQQ57_004161"
                     /pseudo
     CDS             2290..2921
                     /locus_tag="OQQ57_004161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          817 a          602 c          663 g          839 t
ORIGIN      
        1 aaaaatagcc cgctccgttt attaccggaa cgggcgagag catgacattg tctgtaatta
       61 taatgagact gctgattcta cttattttta atttcaagaa aagcgttttc tacaaagaat
      121 tatgagattt aatgttttgt ttagacaata ttgtcattct gttcaataat gaaagtcttc
      181 atcaacaaca agtaaaaaca acgtccctct catcgaaccg gacttgcaga tttcccgcat
      241 ccggctctct tgcaacacat cagaccttca cgttcgggcg gttatgggga aggtccagca
      301 agctgtatga gccctaactg tttgaatacc agtagattac cagaaacttc tatcgattga
      361 agacattacc aactagcgtt actaaatgtt gaccaagttt tgttcacttg tctggttttg
      421 atagtagcat tctgcagagt attttgatat gataaatatg cattaacaat gatattattg
      481 ttaatttcct agcatgaaaa ttaaaagatc aactttttat ctcgaatatt ttttacatta
      541 tcagttggtt tcttatgaat gacaattcat tgcttagaaa ttcttcatta ttcatcgcct
      601 atatgggatg tgtagggtgg gtcagtgctt attcttatgg ctggggaacc tctttttact
      661 atggatttcc atggtgggtt gttggtgcag gtttggatga tgttgccaga agtttactct
      721 atgctatcat agtaatgggt atacttttta ccggttgggg gattggtatt ttattttttc
      781 ttcttataaa gaaaagaagt aaaatacaag acttgagttt ttttagacta ttttttgcta
      841 ttaccctact gtttttccct gtaatattcg aacttttaat tctcaaacaa tatttcatac
      901 ttccattatc actttcatgc attattagtt cattggttat ttcaataata attcgcatat
      961 atggacggat cttttctgta tcatgttttt cagatatccc ttttgttaga gaacaccgca
     1021 ttaagttaat tatggctggt tttttggttt atttttggct tttttccttt cttgttggct
     1081 ggtataaacc tcaattaaaa aaagaatatc agatgctttg ttataataat agttggtatt
     1141 atgttcttgc tcgttatgat tcacggctcg ttttgtctag ttcatttaaa gatgacagta
     1201 acagattctt aatatttaat acagaacagt cgggatttta tgaaatcaat gatgtttatg
     1261 tcagaaagta ataatcctct cccacaaagt gaattaaacg aatatataat gcgttcgaag
     1321 tatatgtatt gagctgtcat actgagaaac aaaccttagg gcagcacaat taaagccaga
     1381 aacaactatg caagaaagtt actaaataag tgctcggaac agtaaaacac tcagggggga
     1441 ctcagtccag attatgtaat cagataaatt gccaaacatc acaaatcacc agcaggactg
     1501 agtgatgccg agcattgcac caataccccg tgatgaacga tgcctgatgc agaaagctcc
     1561 ctataaaaca aagaacaaaa actacgaccg gcgattcacc gtcatactga tgctgcatcg
     1621 tggtgacact gtctgtcact ttcatgttga ctgaacaact ctgctgcgaa gaaggtgtac
     1681 cgccggcggg atttgattgt ccggcgtcta gcttccactt ccctgatgga actgaaagtt
     1741 gttatggccg gtcagcttgc cctgtccgca ggacatgagg tgctgtgacg gacagcacca
     1801 gtaacggaaa gtgacaataa aaatgaatac tgcgctgata gttgcactaa tgtgtatgtg
     1861 gtatgcggta cccgctgctg caaaagagac tttactggct atgccacgta attcaacaga
     1921 acattgctat gcggagatta atgtgcacgg accatatggg gtgtatttcc gagtggtccc
     1981 gcatcccccc gggggaaaga gctgggtcga atgtaacagt gactactatt actctgataa
     2041 accaccggga gtacagatac tcggaacccg tgcagggtgt cgggtatacg gaatctgcgg
     2101 gaccacctcg acactgcatg tggctggaag aggggttgtg tgtattaaaa atatatgcag
     2161 tccacgtggg atgataattc acaggatacg gaaacgtcct gtagtggctg taagcgatga
     2221 gatgtgatct tatccagcaa tagtggacac gcggctaagt gagtaaactc tcagtcagag
     2281 gtgactcaca tgacaaaaac agtatcaacc agcaaaaaaa cacgtaaaca gcattcgcct
     2341 gaattttgca gtgaagccct gaagcttgct gaacgcatcg gtgttgctgc cgcagcccgt
     2401 gaactcagcc tgtatgaatc tcagctctat gcgtggcgca gcaaactgca gcaacagatg
     2461 acctcgtctg agcgtgaaag tgaactggcc gctgaaaatg cccgcctgaa gcggcaactg
     2521 gcggtgcagg cagaggaact ggctatcctc caaaaggccg cgacatactt tgcgaagcgc
     2581 ctgaaatgaa gtatgtcttt attgaaaaac atcaggctga gttcagcatc aaggcaatgt
     2641 gccgcgcgct ccgggtggcc cgcagcggct ggtatacgtg gtgtcagcgg cggacaggga
     2701 taagccctcg tcagcagttc cgtcagcact gcgacagcgt tgtcctcgcg gcggccttta
     2761 cccggtcaaa acagcgttac ggtgcaccac gcctgacgga tgaactgcgt gctcagggtt
     2821 accactttaa cgtaaaaacc gtggcggcaa gcctgcgccg tcaggggctg agggcaaagg
     2881 cctcccggaa gttcagcccg gtcagttacc gcgcacatgg c
//
LOCUS       DAJVUK010000261         2918 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.265, whole genome shotgun sequence.
ACCESSION   DAJVUK010000261 DAJVUK010000000
VERSION     DAJVUK010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.265"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1322
                     /locus_tag="OQQ57_004162"
     CDS             <1..1322
                     /locus_tag="OQQ57_004162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415419.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1958692.1"
                     /translation="LVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTM
                     GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLF
                     IFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFI
                     PHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSL
                     AMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSID
                     APLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVQVAILIMLPTLGIGDMNNLYK
                     WLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFA
                     CLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK"
     gene            complement(1323..2231)
                     /locus_tag="OQQ57_004163"
     CDS             complement(1323..2231)
                     /locus_tag="OQQ57_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1958693.1"
                     /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR
                     LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINDARV
                     AARIFLMPLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIG
                     PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI
                     ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLGDWSTERPGFQIYYPNRQY
                     MSCGLRAFLDYVKTGQISQSQRHRPQ"
     gene            2331..>2918
                     /locus_tag="OQQ57_004164"
     CDS             2331..>2918
                     /locus_tag="OQQ57_004164"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H oxidoreductase"
                     /protein_id="HCS1958694.1"
                     /translation="MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR
                     RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI
                     DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED
                     ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL"
BASE COUNT          738 a          621 c          728 g          831 t
ORIGIN      
        1 ggctggtggt tgttttttca tgggtgttta tctttgcgct ctatttcaca ccttatgcgc
       61 taattgttgg tcagttaggc tcgaccttca aagatgggaa gggcggggtc agtacctgga
      121 ttaaacacac gatgggaccc ggactggctt atctcgccgc gtggacctac tgggtggtgc
      181 atattcccta tctggcacaa aaaccccagg caattctgat tgcgctcggt tgggcgatga
      241 aaggcgacgg ttcgctaatc aaagaatatt cagtcgtagc gttacagggg ttaacgctgg
      301 tgctgtttat cttctttatg tgggttgctt cacgcggtat gaaatcgctg aaaatcgtcg
      361 gttctgtggc agggattgcg atgtttgtta tgtcgctcct gtatgtggcg atggcggtaa
      421 ccgcgcctgc gattactgaa gtgcatattg cgaccacaaa cattacctgg gaaacgttca
      481 ttcctcatat cgactttacc tacattacca ctatttcaat gctggttttc gcggttggcg
      541 gagcagagaa gatttctcct tacgttaatc aaacgcgcaa cccaggaaaa gaatttccaa
      601 aagggatgtt atgcctggcg gtgatggttg cggtttgtgc cattctgggc tcactggcga
      661 tggggatgat gtttgactcg cgtaatatcc cggatgactt aatgactaac ggtcaatatt
      721 acgcctttca gaagctgggc gagtattaca acatgggtaa tactttaatg gtgatttacg
      781 ccattgcgaa taccctggga caagtagctg cgctggtatt ctcgattgat gccccgctta
      841 aagtgctatt aggtgatgct gacagcaaat atattccagc cagtttatgt cgtaccaacg
      901 cttctggtac gcccgttaat ggctattttc tgaccctggt gcaggtggca attctgatta
      961 tgctgccgac tctcggcatc ggtgatatga acaatctcta taaatggctg ttgaatctta
     1021 actcggtagt gatgccgctg cgttatttat gggtatttgt tgcatttatt gcagtcgttc
     1081 gcctggcgca gaaatataaa ccagaatatg tctttattcg taataagcct ctggcaatga
     1141 ccgtcgggat ttggtgtttt gcctttaccg cctttgcctg tttgacgggg atcttcccga
     1201 aaatggaagc cttcactgca gagtggacct tccagttggc gctgaatgtt gcaacgccgt
     1261 ttgtgctggt aggattagga ctgattttcc cgctgctggc gcgtaaagcg aatagtaaat
     1321 aattattgtg gtcggtgacg ctgactctgg ctgatctgac ccgtttttac ataatcgaga
     1381 aatgcgcgca agccgcagga catatactgg cggtttggat aatagatctg gaagcctgga
     1441 cgctctgtgc tccagtctcc cagtacacat tctaaacgac cagtatcaag gtactccttg
     1501 atctgttcat agagcagata cccgatacca gcacccatca aaacggcctc cagttcagca
     1561 tcaacatcat ccagaatgat atttcctgcg acagcaattt ccagctcctt tgcaaattgc
     1621 cagtggaaag gtttgccgct gggataacga aaaacaacac attgatgatt aagcagatca
     1681 tgaggatggc ggggtttgcc atatcttgca aagtactctg gcgttgctgc tacacataat
     1741 ttcactggcg ggccgatcgc cacgctgatc atatcttttt cgacgatgcc actaagtcga
     1801 acgccagcgt caaagccctg ttggacgata tcgacaagag agtcgtcagt tgtgagctcg
     1861 actttaatat caggatattc acgtgtgaaa ccaaccagta aaggcattaa aaatatacgt
     1921 gcagctaccc gggcgtcatt gattttgagc gttcctgtcg gtgtcagacg aaaatcattc
     1981 atctcatcta acatgatctg aatttcgtcg aaagctgggc gcaatcgttc atagagatta
     2041 gaacctgctt ccgttaacga tacgcttcgg gttgtccgat tgaataagcg aattttaaga
     2101 cgttgttcca gtgttttaat actatggcta atggcggacg aggataagcc taactcatcg
     2161 cccgctgcac gaaagctttg attacgggcc acggcaaaga aagtggcaaa gtcagacata
     2221 ttcatccgca ttagtgaaaa tccttcatta actcatcctg aatcatcacg tttacaggat
     2281 tatgccgcct gcgtaaagtg cgctccagaa cttaacgtgg aggtaaaatt atgcagtctg
     2341 aacgtattta tttggtatgg gcccatcctc gtcatgattc attgaccgca catattgctg
     2401 atgcgatcca tcagcgggca atggagcgga aaatacaggt gacggaactc gatttatatc
     2461 ggcgtaattt caacccagtg atgacgccgg aagatgaacc agactggaag aatatggata
     2521 aacgttattc tccagaggtt catcagcttt attcagagct gcttgaacat gacacgttag
     2581 tggtggtttt tcctctctgg tggtacagct tcccggcaat gctaaaagga tatattgaca
     2641 gagtatggaa taatgggctg gcttatggag atgggcacaa attaccattc aataaagttc
     2701 gttgggtggc gctggttgga ggagacaaag aatcatttgt ccagatgggc tgggaaaaaa
     2761 atataagcga ttatttgaaa aatatgtgca gttatcttgg tattgaagat gccgatgtca
     2821 ctttcttgtg taatacagtg gtattcgatg gggaagaact tcatgcgagc tattatcagt
     2881 cgttattatc tcaggtacgg gatatggtag atgcacta
//
LOCUS       DAJVUK010000262         2867 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.266, whole genome shotgun sequence.
ACCESSION   DAJVUK010000262 DAJVUK010000000
VERSION     DAJVUK010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.266"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..1073)
                     /locus_tag="OQQ57_004165"
     CDS             complement(<1..1073)
                     /locus_tag="OQQ57_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HCS1958695.1"
                     /translation="MAFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGAVISATSDPEYYFVVVLAGQSNGMSYGEGLPLPGTYDRPDPRIKQLARRST
                     VTPGGAACKYNDIIPADHCLHDVQDMSRLNHPKADLSKGQYGTVGQGLHIAKKLLPFI
                     PANAGILLVPCCRGGSAFTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALE
                     KNPKNVLFAVVWMQGEFDFGGTPANHAAQFGALVDKFRADLADMAGQCVGGSAGGVPW
                     ICGDTTYFWKQKNESTYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIR
                     GIGYYGSKWRDSSATWTSQDRAS"
     gene            complement(1563..1639)
                     /locus_tag="OQQ57_004166"
     tRNA            complement(1563..1639)
                     /locus_tag="OQQ57_004166"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1603..1605),aa:Arg,seq:tct)
     gene            complement(1653..1729)
                     /locus_tag="OQQ57_004167"
     tRNA            complement(1653..1729)
                     /locus_tag="OQQ57_004167"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1693..1695),aa:Arg,seq:tcg)
     gene            complement(1737..1812)
                     /locus_tag="OQQ57_004168"
     tRNA            complement(1737..1812)
                     /locus_tag="OQQ57_004168"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1777..1779),aa:Ile,seq:cat)
     gene            complement(1853..2818)
                     /locus_tag="OQQ57_004169"
                     /pseudo
     CDS             complement(1853..2818)
                     /locus_tag="OQQ57_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001403604.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
BASE COUNT          644 a          851 c          694 g          678 t
ORIGIN      
        1 tggctcgccc tgtcctgtga cgtccaggtg gctgagctgt cacgccattt cgaaccgtaa
       61 taaccgatac cccgaatgtc cgggtcttct tccggtttgt tcgtcggcac attcaccccg
      121 ttctcatcgg tcatgaacgg tacgaaatgg atattctttt ccgttttatt tttatagctg
      181 ccgtacaccg tctggtacgt ggattcgttc ttctgcttcc agaaatacgt cgtgtccccg
      241 catatccagg gaacaccgcc agcagagcca ccgacgcact ggcctgccat atccgccagg
      301 tctgcacgga atttatcaac cagcgcacca aactgtgcgg catgatttgc cggcgtaccg
      361 ccaaaatcaa attccccctg catccacacc acggcaaaca gcacattttt cgggttcttc
      421 tccagtgccg cttttgttcg accgataagg tccttataca gcggcttgtc cacaccccag
      481 cgggttgaat tctccgaggc accactcgcg tcactgtatg tgccatcagc tccggtggtg
      541 aacgctgaac caccacgaca gcacggaacc agcagaatgc ccgcattcgc cggtataaac
      601 ggcagcagtt ttttggcgat atgcagcccc tgccccacgg ttccgtactg cccctttgac
      661 aggtccgctt tcggatggtt aagacggctc atgtcctgca catcatgcag acaatggtcc
      721 gccggaatga tgtcgttata tttgcatgct gcaccgcccg gtgtcaccgt actgcgacgc
      781 gccagttgct taatacgcgg gtccggacgg tcatatgtcc ccggcagcgg aaggccttca
      841 ccatacgaca tgccgtttga ctgccctgcc agaaccacaa caaagtaata ctccgggtcg
      901 ctggtggcgc tgattactgc accttctgct gcaatcgcct gcatcagagt ataaggggtt
      961 atggccaccg gactaccaaa cggctgccag ccctctttca gtttatgtgt cagcttttcc
     1021 gcaagatctg acggcgacgc cgccctgaca acatcatagt gtttaaaagc catgaatcct
     1081 cccggccggg ataatattgt gagtaaaatg aggagcgggc tgaagtccgg aagttacagg
     1141 acaatggcag aagagagacg acagcccgca attcgaaaaa gaccgcgcag ttgcgcagag
     1201 tgactactat ggggtattat tcgccagctg aaatattact tcacgtttta ttgtttattc
     1261 cttgccgccc gcgtctccca gcgcgggctt tttttgccca caagaaagcc cctccggaga
     1321 ggggctggag agtggcgcta tgtgccattg catggtgccg ggtgcctccc ggtgaattca
     1381 gtaccagcac ctgaatccgc gattatccca tatacctact cgctgattgc ccctccgcac
     1441 agggggattc accatgccag tttcttttaa caaactcccc gcaaaccaga caacagtcaa
     1501 ccgtctgaat tgtgagacat ttaaaaaaaa agcccgcaaa agcgagccag ggaaaataag
     1561 tgtggcgcgt tgtactggat tcgaaccagt gaccgattgc ttagaaggca attgctctgt
     1621 ccggctgagc taacaacgca tgatgcagat aatggaccgc catcggggac ttgaaccccg
     1681 cgcagccagc ttcgaaggct ggcgctcttt cctgatgagc taatggcggt atgtgatggt
     1741 ggcccttgct ggatttgaac cagcgacctg gcgattatga gtcgctcgct ctcaccactg
     1801 agctaaaggg ccgggagccg cataataacg acgcgtaatt aattcttcaa tatcatccgt
     1861 tctggctgac taaatcctgt acttcccgaa ccgtctgctc aaaacgttca gtctccagct
     1921 caacgccaat tgcacgacgc ccgagcgcca gtgccgcttt cactgtcgaa cccgacccca
     1981 tgaaaaaatc tgcaatcagg tcacccggac gactgctagc gctgattatc tgctgcagca
     2041 tttctgccgg tttttcgcac ggatgtttcc cgggatagaa ctgcaccggt ttatgcgtcc
     2101 acacatcggt atacggcacc tgcaccgtca cgccaaaata ccgccgcaga tgtttatatt
     2161 cactcagcag ctccgcatac tgccggttca gtgaggtata cgtatccacc agctggtggt
     2221 ggagcttttc cagttcacca cgccgatgct tctcttctgc cacccgggca aacagcgcct
     2281 gtaatttcag ataatcgctt tcattcggca actgccactg actggcactg aaccagtgcg
     2341 acaccatgtt tttctttcct gtggcatctg caatctgttt tgccgttatc cccagggcag
     2401 ctcgcgcatc acgaaagtaa gaaatcagcg gggccatcac atgctgtttc agtgcactgc
     2461 ccttcgcctc atagccatca tctttcgggc ggtacggccc ctgataatgt tccgcgaaca
     2521 gaatgcgctc tgtggcgggg aaatacgccc gcaggctttc cttgttgcat ccgttccagc
     2581 gtccggacgg cttcgctcag ataatatggt tcagcacact gaagcgttca cgcatcatga
     2641 tttcgatatc agatgccagg cgatgaccac agaacaggta aagacttccg gcaggtttca
     2701 gcacccgcca gaactgcgcc agacactgct ccagccactt caggtaatca tcgtcgccct
     2761 tccactggtt atcccagccc tcaggcttca ctttaaagta cggcgggtcc gtgactatca
     2821 ggtcaacaga attttcgggt aacgaccaga taaattccag gcagtcg
//
LOCUS       DAJVUK010000263         2831 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.267, whole genome shotgun sequence.
ACCESSION   DAJVUK010000263 DAJVUK010000000
VERSION     DAJVUK010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.267"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..135
                     /locus_tag="OQQ57_004170"
                     /pseudo
     CDS             1..135
                     /locus_tag="OQQ57_004170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309413.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
     gene            385..1251
                     /gene="ospB"
                     /locus_tag="OQQ57_004171"
     CDS             385..1251
                     /gene="ospB"
                     /locus_tag="OQQ57_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspB"
                     /protein_id="HCS1958696.1"
                     /translation="MNLDGVRPYCRTVNKKNESISDIAFAHIIKRVKNSSCTHPKAAL
                     VFLGEKGFCDSNDVLSIMGQQIPRVFKNKMLYDYVFKNEKSKNDFLKMAESWLPQSEP
                     IVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVYILGHGSPGSHQLGLGSELID
                     VQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSLPFFKEKES
                     LLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSS
                     QKKTFIINKELD"
     gene            1581..2321
                     /gene="phoN2"
                     /locus_tag="OQQ57_004172"
     CDS             1581..2321
                     /gene="phoN2"
                     /locus_tag="OQQ57_004172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAP2 family phosphatase PhoN2"
                     /protein_id="HCS1958697.1"
                     /translation="MKTKNFLLFCIATNMIFIPSANALKAEGFLTQQTSPDSLSILPP
                     PPAEDSVVFQADKAHYEFGRSLRDANRVRLASEDAYYENFGLAFSDAYGMDISRENTP
                     ILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDATCTPDKDENMAITGSYPSGHA
                     SFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMGASVVAVLH
                     NTPEFTKSLSEAKKEFEELNTPTNELTP"
     gene            complement(2674..2831)
                     /locus_tag="OQQ57_004173"
                     /pseudo
     CDS             complement(2674..2831)
                     /locus_tag="OQQ57_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
BASE COUNT          926 a          515 c          526 g          864 t
ORIGIN      
        1 gcggtaagag aagttcatca tacttggcgc agttacgcga tgtttctgct agaggtgatg
       61 ccgtaaagaa cggcagaaca ttaccggaac aagatagcgg tctacctgca ctggtatcag
      121 acccggggct tccccggatg atctccacgg tactttaggt actgtgtcta tattatgtag
      181 gtaggatcaa ttaactttgt agttgaaatt ctttcattga aataatgaat aaaaaagaca
      241 aaccgcatta aacaatgcca gaatataatt gcatttttgt tccgtttttt taaatcatag
      301 tatacaaaga agcttgcata ctatatgaaa atataacacc ctttactatg atgtttataa
      361 aacaatatat ggagtcatgt aggtatgaat ttagatggtg ttagaccata ctgtagaaca
      421 gtcaataaaa agaatgaaag catatcagat attgcatttg cacatataat aaaaagggta
      481 aaaaattcat catgtactca cccaaaagca gcattggttt ttttaggaga gaaaggtttt
      541 tgtgatagca atgatgttct atctattatg ggacaacaaa taccaagagt atttaagaac
      601 aagatgttat atgattatgt ttttaaaaat gaaaaaagta aaaatgattt tctaaaaatg
      661 gctgaatcat ggctaccaca gagtgaacca atagtaataa ataatgatga tgacgcattg
      721 aatgctgctg cttatttttc tgtaaaaaaa gcgaaaataa aaacagtaaa cgatactgat
      781 tttaaagagt ataataaggt ttatattctt gggcacggta gtcctggttc tcatcaatta
      841 ggccttggtt cggaacttat tgatgtacaa acaatcattt caagaatgaa agactgtggt
      901 attctaaatg tgaaagatat ccgttttact tcatgcggct ccgctgataa agtggctcct
      961 aaaaatttta acaatgcccc tgctgaaagt ctttcttgta tccttaactc tctgcctttt
     1021 tttaaggaaa aagaatcttt gctagagcag ataaaaaaac accttgaaaa cgatgagtca
     1081 ttgagtgatg gtctaaaaat atccggctat catggatatg gagttcacta tggtcaagag
     1141 ctttttccct actcacatta tcgttcaact tcaattcctg ctgatccgga gcatacagta
     1201 aaaagaagct ctcagaaaaa gacttttatt attaataaag aactggatta gtataaaatt
     1261 tttaacctat agttaattgt ttgcatttaa gatgaagtta tttttttctt tagtagaaaa
     1321 gtgcttccct atgagggaaa atcacaaatc atcataatac agagacaaaa cgatacgaac
     1381 aaatagataa aaaacatcat tcttttacta cattattttt cgtgaatatg aaaaataatg
     1441 ttattacttt aatataagac tattttttgt ttttccatca ctctgttcaa atttttccgc
     1501 atgacttgtg ttttttgtaa cacagctcgt tttttacagc tgaccaaaat catcaattaa
     1561 ttatgctaag gaaataaatt atgaaaacca aaaactttct tcttttttgt attgctacaa
     1621 atatgatttt tatcccctca gcaaatgctc tgaaggcaga aggttttctc actcaacaaa
     1681 cttcaccaga cagtttgtca atacttccgc cgcctccggc agaggattca gtagtatttc
     1741 aggctgacaa agctcattat gaattcggcc gctcgctccg ggatgctaat cgtgtacgtc
     1801 tcgctagcga agatgcatac tacgagaatt ttggtcttgc attttcagat gcttatggca
     1861 tggatatttc aagggaaaat accccaatct tatatcagtt gttaacacaa gtactacagg
     1921 atagccatga ttacgccgtg cgtaacgcca aagaatatta taaaagagtt cgtccattcg
     1981 ttatttataa agacgcaacc tgtacacctg ataaagatga gaacatggct atcactggct
     2041 cttatccctc tggtcatgca tcctttggtt gggcagtagc actgatactt gcggagatta
     2101 atcctcaacg taaagcggaa atacttcgac gtggatatga gtttggagaa agtcgggtca
     2161 tctgcggtgc gcattggcaa agcgatgtag aggctgggcg tttaatggga gcatcggttg
     2221 ttgcagtact tcataataca cctgaattta ccaaaagcct tagcgaagcc aaaaaagagt
     2281 ttgaagaatt aaatactcct accaatgaac tgaccccata aagctggaca gcctgtatca
     2341 ggctatggag ggcccataga caaatctacc ctatatgagc ataggaggag tctatgggca
     2401 caccacgttt tacccctgaa tttaagggat tactggaaag gctgggacat atccctccgg
     2461 cagaagcaga aaaagcttat tatgctgcca tcggaaacga tgatctggca acctgagttc
     2521 acagataaaa cattctctag gaaactcggg gcggttccgt tcaccacatg caatgtggtg
     2581 ttgcagggga acggtctgca ccatccccta tgtcgatcaa tataacagaa atgacaactt
     2641 cagattcagg gcacaaccta aatatatttt aggtcacctc tcaaatcgtt tgcctgatac
     2701 cgctccattt tttaataaaa aattcaatca tttttgaatc tttgcttttc attgcattgt
     2761 caagcatagt gtccccacta tttgcttttt gaaatttttt gtttacatca accaatccat
     2821 tattgataaa a
//
LOCUS       DAJVUK010000264         2792 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.268, whole genome shotgun sequence.
ACCESSION   DAJVUK010000264 DAJVUK010000000
VERSION     DAJVUK010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.268"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(49..233)
                     /locus_tag="OQQ57_004174"
                     /pseudo
     CDS             complement(49..233)
                     /locus_tag="OQQ57_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311258.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
     gene            complement(395..469)
                     /locus_tag="OQQ57_004175"
     tRNA            complement(395..469)
                     /locus_tag="OQQ57_004175"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(434..436),aa:Arg,seq:cct)
     gene            complement(545..1477)
                     /locus_tag="OQQ57_004176"
     CDS             complement(545..1477)
                     /locus_tag="OQQ57_004176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HCS1958698.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEY
                     MPIFNEETHDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNDKNPA"
     gene            1771..2526
                     /gene="mlaA"
                     /locus_tag="OQQ57_004177"
     CDS             1771..2526
                     /gene="mlaA"
                     /locus_tag="OQQ57_004177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HCS1958699.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
BASE COUNT          693 a          651 c          671 g          777 t
ORIGIN      
        1 catcttttac ggggtgaagg tagatttcgt atgaagggta tctgttgtct cctgcaaagt
       61 cataagcgga tattttccta cggtcagtat ttttttctta ccgtcaatct tgtagcgaag
      121 ttgccatacc ttttcccgga tacaggaaca taaaggtaca ggccattacc atcgagaagg
      181 cggtatggtt tttctttcgg ctttgctgct tcaatctgct tcacggtgag catgggtaaa
      241 aatccggtgg gtaaaattat tttatccact ttttacccgt catggagtgc ggctgtcaac
      301 gatctgacgc gaaccatgac gaaccgtgaa tatacggaag gcttgatatt caggggattt
      361 tgcggactgg tacggatggg agcgaactga taaatggtgt cccctgcagg aatcgaacct
      421 gcaattagcc cttaggaggg gctcgttata tccatttaac taagaggaca atgcggcatg
      481 agtatacccg ctaatggact gcggagtaag tacactgccg ctcgattgct taaaccctcg
      541 ccatttatgc tgggttttta tcatttttct taatgttttc cgcacgttct gctttttggc
      601 gtgcttctgc tttgcgcttg ttgctcatgt cgttacggat ctgtgcatga ctcattaacg
      661 cgaagataaa ggtgccgccg cagatattcc ccgctaaagt aggtagtgcg aagggccaaa
      721 tgaaatcgct ccagtgcagc gtgccgttaa acaccagata gaggatttct acagaaccga
      781 caacgatgtg ggtggtgtca cccagtgcaa taagccaggt catcaatata atcaccacaa
      841 tctttgccgc acccgctgca ggaaacatcc aaaccatagt ggcgatcagc cagccggaaa
      901 tgatcgcgtt ggcaaacatc tcgctggggg tgttcttcat cacatccatg ccgattttga
      961 caaatgcatc gtgagtttct tcattgaaga taggcatata ttcaaatgcc catgcagcaa
     1021 tacctgtccc gagaatatta cccagcagca cgacgcccca taatcgcata agtaagccga
     1081 cgttgctcat tgtcggtttt tgcatgacgg gtagtaccgc agtcacggtg ttttcggtaa
     1141 ataattgctg gcgggccata atgacgataa taaaaccaaa ggtataaccg agattctcca
     1201 acaagaagct gcccggcacg ccttccagtt cgacatgaaa tatccctttt gccagtaacg
     1261 aagcgcccat cgacagaccc gccgcaatgg ctgaccacag tagtgccatt gcgtcgcgtt
     1321 ccagctcttt ttcaccatcc tggcggatat gttcatgaat tgccatcgcc cgggagggga
     1381 gtcgatcttc atctatttct atttttttgc cgcgctcttt ttcttcgctc tcaacttcaa
     1441 tttcgtcgct gtgttgatca attttgtcgt tgtccatggt ctcttctctt gaattagcac
     1501 gtatagctaa agcgtagcgg cttttttgct cgcaactggc gggagttact ctgaaaatgt
     1561 agaaaaggcc gcgtttgcct ttttctgttt ctatagaatc aagtagccta cagggcggcg
     1621 attaccaggc tatgatcaaa tcagcaaatc agggcgtctg gacatcagtt gacgtgctgt
     1681 tacaatcgcc cacacctaaa caggcggata cggtatcgtt ccgtcatgga tggcaaactg
     1741 cataagccat aaaaaaacag ggagacattt atgaagcttc gcctgtcggc gcttgctctg
     1801 ggaactacgc ttctggtggg gtgtgcgagt tccggtacag atcagcaagg gcgttctgac
     1861 ccgttagaag ggttcaaccg caccatgtac aacttcaact tcaatgtatt agacccgtat
     1921 attgttcgac cggtcgctgt cgcctggcgt gattatgttc cgcaaccggc gcgtaacggt
     1981 ttgagcaact ttaccggcaa ccttgaagaa cctgcggtga tggttaacta cttcttgcag
     2041 ggcgaccctt atcaggggat ggtccacttt acccgctttt tcctgaacac cattttgggg
     2101 atgggcggct ttattgatgt tgcagggatg gcgaacccga aactgcaacg gactgaacct
     2161 caccgcttcg gtagtacgct tggtcattat ggcgtgggtt atgggcctta cgttcagtta
     2221 ccgttctacg gtagcttcac gctgcgtgat gacggtggtg atatggcgga tggtctttac
     2281 ccggttcttt cctggctgac ctggccgatg tctgtgggta aatggacgct tgaagggatc
     2341 gaaacccgcg ctcagctgct ggattccgat ggtctgctgc gtcagtcgtc cgatccttat
     2401 attatggtgc gcgaagcgta cttccagcgt catgatttca tcgctaatgg cggcgaactc
     2461 aaaccgcagg aaaatccgaa cgcacaagcg attcaggatg atttaaaaga tattgattct
     2521 gaataagaaa caaataaaaa aggtgagtcg caaaactcac cttttttgtt gttatccctc
     2581 aattaccaca agtaaaagga gataaaccga caatgacccg gacgtaatga tgtaaaaata
     2641 ctgatgttcg tcactgacta tttccgatat tcaggcgttg aaaaatcaaa aaactggaaa
     2701 aataatttta aatatcatca aaattaacac ctggcgcaga tagttgatta atttcatttt
     2761 gatattccgt ctggcgattt tgaagccttt tt
//
LOCUS       DAJVUK010000265         2720 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.269, whole genome shotgun sequence.
ACCESSION   DAJVUK010000265 DAJVUK010000000
VERSION     DAJVUK010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.269"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..155)
                     /locus_tag="OQQ57_004178"
     CDS             complement(<1..155)
                     /locus_tag="OQQ57_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HCS1958700.1"
                     /translation="MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINP
                     VASIRYY"
     gene            complement(160..1248)
                     /gene="capU"
                     /locus_tag="OQQ57_004179"
     CDS             complement(160..1248)
                     /gene="capU"
                     /locus_tag="OQQ57_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HCS1958701.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKLGIDITFALFRNSLHIPTAWRLLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTW
                     KHPFRIIRQKTYLTQKTKVFSINHFCDEVIVPGTSMKTHLEQEGCRTRVTVVPPGFDF
                     QKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQM
                     ARQAKQDIEERFDINKTALKILTLAKHK"
     gene            complement(1251..2093)
                     /locus_tag="OQQ57_004180"
     CDS             complement(1251..2093)
                     /locus_tag="OQQ57_004180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCS1958702.1"
                     /translation="MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLIT
                     GFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDYIQVAEELG
                     FYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPR
                     LPDD"
     gene            complement(2457..2573)
                     /locus_tag="OQQ57_004181"
     CDS             complement(2457..2573)
                     /locus_tag="OQQ57_004181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004996477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HCS1958703.1"
                     /translation="MPGIPPEIRWNNQKNALQLWNKEGGVVRREGDPLEMAQ"
BASE COUNT          816 a          628 c          496 g          780 t
ORIGIN      
        1 taataatatc gaatactggc aaccggattt atagcacatc gcaaaatgta catgaaccgg
       61 aattttctgt gttcccactt ccccgggagt gaatctgagg aaaaaacaat ccttttaagg
      121 aaaccgataa atgataagtt acttacagaa aacatattgt tacttgtgct tcgctaatgt
      181 gagtattttt aacgcagttt tattaatatc aaaccgctct tctatatcct gttttgcctg
      241 gcgagccatc tgataaaaac gcccagggtc attaaaaaaa tcattcaggg cgcacatcca
      301 tgcgtgctta ttacctgctg gtaacaatgt cccggtctgg ttgttctgaa taacatcagg
      361 gattccacca atctgactgg ccagtacagg cacagaaaat gccgatgctt ctgccagtac
      421 cataccaaac gattcgtttt ctgaaggcag aaccaccaga ctggcaaccc gatatacggg
      481 ggcggcagga aaaacattgt cagcaataaa aacatcatca tgcatgccca tactgtcaat
      541 ctgatactgt aaatgctccc gcagttcagg cgaaccagac cccacaatca accaacagaa
      601 ctgtcgtcca ttcattttta aatggaacag taaattcaac ataaattcgt gccctttttc
      661 cgggcgcaac attcctacct gagcaataac ggggcatccc cttcgggacg ccagccaaga
      721 aagaacattt ggaggcaaac tgtttcggga atcaacgtat aatttctgga aatcaaagcc
      781 tggaggcaca acagtaaccc gggttcgaca tccttcctgc tccagatgtg tcttcatact
      841 tgttccggga acaatcacct catcgcaaaa atgatttatt gaaaaaactt ttgttttttg
      901 tgtcaaatat gtcttttgcc tgataattct gaatggatgt ttccaagtga ataaccgtac
      961 taaaccaaca atattgctat catgcccact gtgacaaacg attgcattgg gctgaaaacc
     1021 atgaactatt ccgagtaatc tccatgcagt agggatgtga agactgtttc gaaataacgc
     1081 gaatgtgata tcaattccca atttactggc ttcaaaagca attttgctgt tttccctgca
     1141 gacaagcaga actgaatgcc ccattttctt cagggccttc atttgagcaa cagcctgtaa
     1201 ttcctgacca cctatattcg gtgatgattc cgtaaatagt atattcatta ttaatcatcc
     1261 ggtaatcttg gccccttatg aaaggccagc aacgatgaaa aaaacggtgt tgtataataa
     1321 aaaagtcgtc ttttcagcca tgcgcaactt tcccgttctt tggtgcttat tcttcctatc
     1381 cgtgtagttc ctttagcagg agcattcatt cttctttctg ttgtatataa ataatagaat
     1441 ccaagttctt cagcgacctg aatataatcc ttattataat aaccttccgg ccaacacaaa
     1501 tgtttactgc attttcctgt catttctttc aaatattctc tcccactcaa caagtcctgc
     1561 cgaagatgtt tacactgttc ttctcgtgaa ctgaactttt tatcccagcg tgtatgagta
     1621 tgcgtatgaa catgaaattc gaccagacca gattgcaaca tttcgtttac ttcagaccag
     1681 cgaagcataa cattatcagc attccctgtc gctatttgat gttcgcaatc gcgatgagaa
     1741 tattcctttc caggagagtg acgaaccgga ccattcccaa taaaaccggt aattaaaaaa
     1801 atatgtgctt tgagattaaa ctcttttaat aaaggatata cctgaaacca gttgtcaagg
     1861 tatccatcat caaatgtcaa cataacgctt ttccggggga gttttccgcc ccgataaaaa
     1921 aactccagtt catctgatga cagtgttttc cagttatttt cagccaacca tttcatttgc
     1981 ttccggaatg tcacgggaga aagtgtaacc agtccggggc aatgactgac atgatgatac
     2041 attaataccg gaacatgatt ggctttgaac aaaatgcccc cttcgtttaa catttaaagt
     2101 ttctggcacc tagtaagcag agacaaaagg aaaacccaat aaagctggtg cattttattt
     2161 ccagatactg gatgaataac atagcaaacc catggcatac tcgatatatt ttactaaatt
     2221 aaacatcaac aattcataaa caatgatata ttatcatatc ttttaaaaac gactcactaa
     2281 gaaccttgag gtggcacact gaatttggct acctgaacag aggtgatatg ttcacctcag
     2341 aacaacacag gtgctccaat gaaaaaaagg aatttcagcg cagagtttat ttacggggtg
     2401 acgctttcat taacctgtac acgaacttct attccggcat catgacaggc ctgcagctac
     2461 tgcgccattt ccagcggatc gccctcccgg cgtaccaccc caccttcttt attccataac
     2521 tgcagagcat ttttctgatt gttccatctg atttcggggg gtattccggg caaggttgtt
     2581 cagtaaggca ttccttcgta aaatcagcat gttttttgca cgacggaaac cggcagccat
     2641 gaaaatctgt ctttatcata ctctgaatcc tgacacgatc ccgggttata aaaaatttgc
     2701 acaggctatt gccaccgata
//
LOCUS       DAJVUK010000266         2720 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.270, whole genome shotgun sequence.
ACCESSION   DAJVUK010000266 DAJVUK010000000
VERSION     DAJVUK010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.270"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(924..1595)
                     /gene="queE"
                     /locus_tag="OQQ57_004182"
     CDS             complement(924..1595)
                     /gene="queE"
                     /locus_tag="OQQ57_004182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HCS1958704.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
     gene            1734..1874
                     /locus_tag="OQQ57_004183"
     CDS             1734..1874
                     /locus_tag="OQQ57_004183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958705.1"
                     /translation="MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFI
                     QI"
     gene            1888..2720
                     /locus_tag="OQQ57_004184"
                     /pseudo
     CDS             1888..2720
                     /locus_tag="OQQ57_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
BASE COUNT          842 a          553 c          498 g          827 t
ORIGIN      
        1 tttaactagt tcggtttatc cctgttttta caaggaatat taactacact cgatgtcttt
       61 agaataaaag acaatacgaa tcgcacttta tcaattttca cttaaagtat gaactggata
      121 tctttattca taagaactat tcatcaacag cgtatagagg cggttatgta aaaccactca
      181 ttagcctcaa aacaaagaca aacttccaga tttattactt aaccaatgaa taacaagctt
      241 aaaaaatata ctgttattct aaagaaaaaa ttaacaggca ttaattcaat attaaaaaaa
      301 taatagatta aaatttctta acgatttaag aatcatacaa ataacacttt gattaaattt
      361 aattttttgt atcgataatt gtgaacctct ctggcatgga gaactatttt gaacatgagg
      421 tgttacgtgg atatgttgct tattacaagt actgctaata taaaaacttg agaaagagat
      481 aacgggttat atggtggttt atccccgctg gcgcgggaaa ctcccagctc ttgcccgcct
      541 caaagtgttg taactcggtt tatccccgct ggcgcgggga actctgtaaa cataacctat
      601 tattaattaa tgatttttta agccagtaac aatctaccaa ctttacagta tcacacaaac
      661 aacacatcca ttatgttaaa gagtacttaa ttcattgatt aaaaaggtaa atatttaaaa
      721 taactctata caaattaaaa tctaccaaac tttaccgcaa taattttcac tccagcgaaa
      781 aattaatgcc acagaatttg tagataatgc taatgattag ccctggatgg gtaaaatgga
      841 ggagttttca gaggcgacaa acaatataaa tgagtagaag tctttacagg ttccacccat
      901 ttataacgct tataaatgtt taatcaggca atatttagat atttatgtgt ttgcatcgac
      961 aaacgccaat tacgcgcaat gcaggtttca atgcacaaac gtgtggcatc atccttttgg
     1021 ctaatcggct gcagtgcaat gactcgcggt ttatcatcgg tcagcgttgc caatagttca
     1081 tcgagtgctt caatatcgcg tacgcgcccc actggatgct tgatttcgtt ggctcgctcc
     1141 agtgcctgtg acaacacgtc atagccgccg cgcatgttca gctttggcga tacggtaacc
     1201 caggtattcg gtgtgcagcg tacttcatga gttccactgg tttcgatctg gcagctaaaa
     1261 ccgttctttt cgagcaggtc agtcagtggc agcaaatcat gaatgcaagg ctcaccaccc
     1321 gtaatcacca catgccgcgc ggtatatccc tgccgaccaa tgacagccag caaatcttca
     1381 ctgctcgccg ccccccactt atcactctct ttggtcttcg ccagaatgct gaaaagggag
     1441 acttcccgat cctcaagctt ttcccaggtg tgtttggtgt cgcaccaggc acagccaacc
     1501 gggcatccct gtaaacgaat aaaaatggcg gggacgccgg taaagtaacc ctcaccttgc
     1561 agggtctgga acatctcgtt aatcgggtac tgcatagcat tctctgtgaa gtggataatt
     1621 gttaattatt gcagatcctg ccgcaacaat catgccttat taacattctg ttacatgcag
     1681 atttaaagaa aaatgcgaaa catatcgtta ataattaaag ggagtaacgt attatgtcag
     1741 aagaaaataa agaaaatgga tttaatcatg tcaaaacatt caccaaaatt atatttattt
     1801 tttctgtatt agtttttaat gataacgagt ctaaaattac cgatgccgcc gtcaatttat
     1861 ttatccagat ttaatgagaa atttataatg cgctatttca tactaatgtt cactttcgta
     1921 tgttcctttg ttgcagccca accaactatt gtcccacaat tacagtaaca agttacggat
     1981 cttacgagta gcttaaactc acaagaaaag aaagaactga cgcacaagtt agaatctatt
     2041 ttcaataata cccaagtgca aattgctgta ttaattgttc ccacaaccaa agacgagaca
     2101 attgaacaat atgctacaag agtttttgac aattggcgtt taggagatgc caaacgtaat
     2161 gatgggatac tgatcattgt tgcctggtca gatcgtactg tccgcatcca ggtaggttat
     2221 gggctggaag aaaaggtaac cgatgctctg gctggagata tcatccgtag caacatgata
     2281 cccgcattta aacaacaaaa atttgctcag ggattagagc tagctataaa cgctttgaat
     2341 aaccaactca cttcacaaca ccaatatccg actaatcctt cagaaagtga atcagcgtct
     2401 tccagtgatc attattactt tgctattttt tgggtatttg cagtgatgtt cttccctttc
     2461 tggttttttc atcaaggcag taatttttgt cgcgcatgta aaagtggagt ctgtatttca
     2521 gcaatctatc ttttagattt attcctgttc tccgataaaa ttttttccat tgctgtattt
     2581 tccttctttt ttactttcac catatttatg gtctttacct gtttatgtgt acttcagaaa
     2641 agagcatcag gtaaaagtta tcattcagac aacagcggtt ccggtggagg ctcaagtggc
     2701 ggcggattta gcggcggtgg
//
LOCUS       DAJVUK010000267         2655 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.271, whole genome shotgun sequence.
ACCESSION   DAJVUK010000267 DAJVUK010000000
VERSION     DAJVUK010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.271"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..396)
                     /locus_tag="OQQ57_004185"
     CDS             complement(<1..396)
                     /locus_tag="OQQ57_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000902876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1958706.1"
                     /translation="MLHLKNITAGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNF
                     ASDTIKMVYTGDGRVVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFV
                     FDYRLKAEDERDALLAQVSARTGEWEEDLL"
     gene            complement(399..920)
                     /locus_tag="OQQ57_004186"
     CDS             complement(399..920)
                     /locus_tag="OQQ57_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958707.1"
                     /translation="MDVYANGQHVFRFQNGVAIALKNIQAGNAKKFTLSSANNSTKNA
                     AFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDARYKHRT
                     EGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQ
                     KLINGIWYNVASI"
     gene            complement(941..1606)
                     /locus_tag="OQQ57_004187"
     CDS             complement(941..1606)
                     /locus_tag="OQQ57_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1958708.1"
                     /translation="MHRIDTLTAVKDKFGPGKNGFTDGNLRTGRLATWLNSAMWNAIQ
                     EEICGVIEKAGIELNKEEHDQLYKAILLLVGGAINEEALLIKNNLSDVEDRDEAVENL
                     GLKPTVDKAKNAVQRDGDTMTGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEG
                     QGENGDIGPLRPFTINLRTGEISMSHKVSVGGGSQVNGALGIGVQNALGGIQLLSGIT
                     IQV"
     gene            complement(1593..2183)
                     /locus_tag="OQQ57_004188"
     CDS             complement(1593..2183)
                     /locus_tag="OQQ57_004188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HCS1958709.1"
                     /translation="MDSLQDDYTKLLYGLMQPGPAWSDTDDVLDGLAPSLVRVHQRAD
                     ELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFF
                     LDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
                     IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD"
     gene            complement(2183..2341)
                     /locus_tag="OQQ57_004189"
     CDS             complement(2183..2341)
                     /locus_tag="OQQ57_004189"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958710.1"
                     /translation="MYLSRISEAISLSAGEVAHRLIVPSSDIDLGETELPVLGEITWQ
                     AYDPARSK"
     gene            2423..>2655
                     /locus_tag="OQQ57_004190"
     CDS             2423..>2655
                     /locus_tag="OQQ57_004190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958711.1"
                     /translation="MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
                     VTAARKGLGTPGSRTVAELESEILQLRKALNEAR"
BASE COUNT          659 a          732 c          578 g          686 t
ORIGIN      
        1 cagcaggtct tcttcccatt cccctgtccg ggcactgacc tgagccagaa gggcatcacg
       61 ctcatcttcc gctttgagtc tgtagtcaaa gacaaattca tcattgcggt aaaaccagta
      121 acccggcgcg gtaatgcggc ggttggcggt aatatcagga acttcaataa cactggcgtt
      181 acggggttca atgcctgtca catccttacc gacccacacc acgcgcccgt ctccggtgta
      241 aaccattttt atggtgtcac tggcaaagtt cttctgttct tcataccagt ttttgccgtc
      301 ttccgaaaaa agccaggtga catcatactg ttttgtcagc tgatattgtt ccgcggtttt
      361 cggattacct gccgtaatat tttttaaatg caacattgtt aaatactcgc tacgttatac
      421 cagatgccat taatcagttt ttgcagcggt cggtaataca caccgttgac gttatccgct
      481 gagttacggc cggtatccga tatcgatatc cctgacaacc cgtgtcccga aggtgagcga
      541 aacgtccatg aaacggtgtt gctgccaggg ttgtaataca tttcataacc ataccgcaca
      601 tcctgtaccc cctcagttcg atgtttatag cgggcatcga agtttccgta atttaacgga
      661 attacctgtc cgtttacagc gaatgtgata ctaccatcgg tatttctctg gctgtagaaa
      721 tgccagccgg aatcatcacc aagctctgca acaacaggcc tggatggatt accccacaaa
      781 taaaacgctg catttttcgt ggagttgttg gcgctggata acgtgaattt tttagcattt
      841 ccggcctgaa tattttttaa cgctatcgcc acaccattct ggaaacgaaa tacatgctgt
      901 ccattcgcat aaacatccag aatgccgtcg ccgttttgtt ttatacctgt atcgttatcc
      961 ccgaaagcaa ttgaattccc cccagggcgt tctgaacgcc gatacccagc gcaccattga
     1021 cctgcgaacc accgccaaca gacactttat gcgacatgga tatttcaccc gtccgcaaat
     1081 taatggtgaa cgggcgcagg ggaccaatat cgccattttc cccctgacct tcactggtgg
     1141 gaataaggtg caggcactct tccgaacgac gaaaaatcag gccaaaagct tcgttgaaaa
     1201 tcctcagcgc attaacacca cggattttca gctctccggt catggtgtcg ccatcacgct
     1261 gaacggcatt ttttgcctta tccaccgtgg gttttaatcc gaggttttca acagcctcat
     1321 ccctgtcttc cacatccgaa aggttatttt ttatcagcaa tgcctcttcg ttaattgcac
     1381 cgcccaccag caataatata gccttatata gctggtcgtg ttcttcttta ttcagttcta
     1441 tcccggcctt ctcaatgaca ccacagattt cctcctgaat ggcattccac atggcactgt
     1501 tcagccaggt agcaagacgt cctgtgcgaa gatttccgtc agtaaatccg ttcttacccg
     1561 gaccaaactt atcttttacc gcagtcagcg tatcaatcct gtgcatcttc atcctcatct
     1621 ggataggaaa ataaaacgac ggtgtgtgac ggacataatt tattaatcac gcactccgca
     1681 accgtatccc cccacgtccg gatcggtgtg ttgcaggcgt ccgtgcatgt ctgccactga
     1741 gcaccggcat ccaccggcaa cgtcacacgc cagaaataac gccagcgatc tccccattcc
     1801 ggatcggggc ttgcatccag gtgctggaac tgttcgatcg ttacgccggt atatcccagc
     1861 gcctcaagct gatccaggaa gaactgctca tttatgccac cagccacatt ggcttttgct
     1921 tcaagacgtt gctgacgctg gcgtaatgtc tgggttccga caggggaaca ggaatcaggt
     1981 aaaccataca attcttcata acgttcaatc agctctgtgg actgaccggg atcgatttca
     2041 atcaccagtt catcagcccg ctggtgaaca cgcacaagcg atggtgccag accgtcaagt
     2101 acatcgtcgg tatctgacca tgcaggcccc ggctgcatca gtccgtacag cagctttgta
     2161 taatcatcct gtaacgaatc cattatttac tccttgccgg gtcataagcc tgccaggtga
     2221 tctcgccgag caccggaagc tcggtctccc ccaggtcaat atccgatgaa gggacgatta
     2281 accggtgggc cacttcacca gcagacaaac tgatggcctc actgattctg gacagataca
     2341 tacgcccctc tggcacactg aggtagcctg agtttaacgg acactccttc ctgaaataga
     2401 atggcatcag aaggagctaa taatgagcag aaaaaaccaa cgttactcta aagagttcaa
     2461 agccgaagct gtcagaacgg ttcttgaaaa tcaactttcg atcagtgaag gcgcttcccg
     2521 attatccctt cctgaaggca ctttaggaca atgggttacc gccgccagaa aagggctcgg
     2581 tactcctggt tcccgcacgg tggctgaact ggaatctgaa attctgcaac tgcgtaaggc
     2641 gttaaatgaa gctcg
//
LOCUS       DAJVUK010000268         2653 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.272, whole genome shotgun sequence.
ACCESSION   DAJVUK010000268 DAJVUK010000000
VERSION     DAJVUK010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.272"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            29..865
                     /locus_tag="OQQ57_004191"
     CDS             29..865
                     /locus_tag="OQQ57_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1958712.1"
                     /translation="MQKNGDTLSGGLTFENDSILAWIRNTDWAKIGFKNDADGDTDSY
                     MWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVINGSLGVGSTNALGGSS
                     IVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGDGKKFMLSSSNNST
                     KNATFNLWGASTRPVVAELGNEAGWHFYSQRNTDNSVIFSVNGQIQPSNWGNFDSRYV
                     KDVRLGTRVVQLMARGGRYEKAGHAITGLRIIGEVDGDDEAIFRPIQKYINGTWYNVA
                     QV"
     gene            834..1397
                     /locus_tag="OQQ57_004192"
     CDS             834..1397
                     /locus_tag="OQQ57_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000930007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1958713.1"
                     /translation="MAHGITSHRCKLCSILKNIKSGNPKTKEQYQLTKNFDVIWLWSE
                     DGKNWYEEVNNFQDDTIKIVYDENNIIVAITKDAPTLNPEGFSVVEIPDITANRRADD
                     SGKWMFKDGTVVKRIYTADEQQQQAESQKVALLSEAESVIQPLERAVRLNMAMDEERT
                     RLESWERYSVLVSRVDTANPEWPQKPE"
     gene            complement(1426..1959)
                     /locus_tag="OQQ57_004193"
     CDS             complement(1426..1959)
                     /locus_tag="OQQ57_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000972171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1958714.1"
                     /translation="MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNF
                     QPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVI
                     KRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV
                     ESTDTSSLPVTFPEQPE"
     gene            complement(1962..2519)
                     /locus_tag="OQQ57_004194"
     CDS             complement(1962..2519)
                     /locus_tag="OQQ57_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1958715.1"
                     /translation="MAGVGFDGSSDISISAKNVNAFALRQTGNTVNGDTSVGWNWDSG
                     AYNALIGGASALILHFNINAGSCPAVQFRVNYKNGGISYRSARDGYGVELGWSDFYTT
                     TRKPSAGDVGAYTRAECNSRFITGIRLGGLSSVQTWNGPGWSDRSGYVVTGSVNGNRD
                     ELIDTTQARPIQYCINGTWYNAGSI"
BASE COUNT          757 a          566 c          591 g          739 t
ORIGIN      
        1 ggaaacggta aacagggctg gtaacgccgt gcaaaaaaat ggcgatacct tgtccggtgg
       61 gcttactttt gaaaatgact caatccttgc ctggattcga aatactgact gggcgaagat
      121 tggatttaaa aatgatgccg atggtgacac tgattcatac atgtggtttg aaacaggcga
      181 caacggcaat gaatatttca aatggagaag ccgccagagc accacaacaa aagacctgat
      241 gacgctgaaa tgggatgcac taaatattct tgttaatgct gtcattaatg gcagtcttgg
      301 agttggttcg acgaatgcgt taggtggtag ctctattgtt cttggtgata atgacaccgg
      361 atttaaacag aatggagacg gtattctgga tgtttatgct aatagtcagc gtgtattccg
      421 ctttcagaat ggagtggcta ttgcttttaa aaatattcag gccggggatg gtaaaaaatt
      481 catgctatcc agctccaaca actccacaaa gaatgcaacg tttaatttat ggggtgcttc
      541 aacccgtcca gtagttgcag agttaggcaa tgaggcagga tggcatttct atagccagcg
      601 aaatacagat aactcggtaa tattttctgt taacggtcag atacagccca gcaactgggg
      661 gaattttgat tcacgctatg taaaagatgt tcgcctgggt acgcgtgttg ttcaattgat
      721 ggcgcgtggt ggtcgttatg aaaaagccgg acacgcaatt accggattaa gaatcattgg
      781 tgaagtagat ggcgatgatg aagccatctt cagaccaata caaaaataca tcaatggcac
      841 atggtataac gtcgcacagg tgtaaattat gcagcatatt aaaaaatatt aagtccggaa
      901 atccaaaaac aaaagaacaa tatcagctaa caaagaattt tgatgttatc tggttatggt
      961 ccgaagacgg taaaaactgg tatgaggaag taaataactt tcaggacgac accataaaga
     1021 ttgtatacga cgaaaataat attattgttg ccataaccaa agatgcccca acgcttaatc
     1081 ccgaaggctt tagtgtcgtt gagattccag atataacagc caatcgtcgt gccgatgatt
     1141 cagggaagtg gatgtttaag gacggaactg tggttaagcg gatttataca gcagacgaac
     1201 agcaacaaca ggccgaatca caaaaggtcg cgttgctttc tgaagctgaa agcgttattc
     1261 agccactgga acgcgctgtc aggctgaata tggcgatgga tgaggaacgc acacgactgg
     1321 agtcatggga acgctacagc gttctggtca gccgtgtgga tacagcaaat cccgaatggc
     1381 cacaaaagcc tgagtaaaaa ttaaggccca atatcgggcc ttctctcatt ctggttgttc
     1441 gggaaacgtt actggcaggc tggaggtgtc tgtagattcg actttctgcg catagagcat
     1501 ccactcggtt aatttttgtt tattctcgtc ggaaatgatg cccagccgta gctgtgagtc
     1561 ccatagctgg gttttatccc tgacaagttg caacaggctt tgcttttcat tttccgcttg
     1621 ttgcctctgc tcttcctcgg tataagttcg ctttatcact acgccatctt tgaacaacca
     1681 tttccccgaa atatcagccc ggcgatttgc tgtaatatca ggtaattcaa cgacgcttgc
     1741 gccttccgga ttaattgctg aaacatcctt ttcaatacaa ataataacgc cgttatggta
     1801 atagaccatt ttcaaagtgt ctggctggaa attcttttgt tcctcatacc agttttttcc
     1861 atcatctgaa taaagccatt tgatgttaaa ttgctttgtt agctggtatt gctcttttgt
     1921 tttagggttg ccagcagtaa tgttttttaa gtgcatcatc gttaaatact ccccgcgtta
     1981 taccacgtcc cattaatgca atactgaatt ggccttgcct gtgttgtatc aattaattca
     2041 tcacggtttc cgttaactga acccgtaacg acataacctg acctgtcaga ccagccggga
     2101 ccattccatg tctgaacaga tgacagaccg ccaaggcgaa tacctgtaat aaaccttgag
     2161 ttacattctg cccgcgtata tgcaccaaca tctcccgctg aaggttttcg tgtcgtggta
     2221 tagaaatctg accaacctaa ttcaacccca taaccatcac gagccgacct gtaggaaatg
     2281 ccaccatttt tataattcac acggaattgt acggcaggac agctaccagc atttatatta
     2341 aagtgaagaa ttaatgcaga tgcaccacca atcagggcgt tatatgcacc actatcccaa
     2401 ttccatccaa cggatgtatc accattaaca gtattacctg tttgtcggag tgcaaatgca
     2461 ttgacatttt tggcactaat tgagatatcg ctagaaccat caaaaccaac tccagcaatt
     2521 tttcgtgctg ttttcagctt tgttgcagta gcggcattgc cggacagttc cccagaaagg
     2581 ccaccgctga atgtttgtcg attggtccag gtattcgctg tactgagtaa cggtattttc
     2641 tccccgcttg tgc
//
LOCUS       DAJVUK010000269         2628 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.273, whole genome shotgun sequence.
ACCESSION   DAJVUK010000269 DAJVUK010000000
VERSION     DAJVUK010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.273"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..2069
                     /locus_tag="OQQ57_004195"
     CDS             <1..2069
                     /locus_tag="OQQ57_004195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3'-5' exoribonuclease"
                     /protein_id="HCS1958716.1"
                     /translation="EESMLLPVSGQELPIRWLAQHGSEKPVTHVSRDELQALHIARAE
                     ELPAVTALAISHKTSLLDSLEIRDLHKLVRDTDKVFPNPGNSDLGLITAFFEAYLDAD
                     YTVRGLLTKEWMKGNRVSRITRTASGANAGGGNKTDRNPNLVHTLDTLDVEIAAATLP
                     MDFNIYEIPGSVYRRAKEVVLKKESPFKEWSAALRAPPGILDYSRAAIFALIRSAHPE
                     FYHYPGRLQGYINAYLTETDHENPSKETLTATRHTPEKDILEEINREVVTERETEEEK
                     PQPSDAMAGEQATTETMEPDTTEHCQNAQSLDAQSQVSSANQVKVTADEVNKIMQAAN
                     ISQPDADKLLAVSRGEFVEGISDPNDPKWVKGIQTRDSVNQNQHESERNDQKAEQNSP
                     NALQNEPETKQSEPVAQQEPEKVCTACGQSGGGNYPDCGAVMDDATYQKTFDEENQVE
                     VQENDPEEMEGAEHPHKENAGSAQDHASDSKTGETADPLITVNGHHEITSTSRTCDHL
                     MIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQ
                     SREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGI
                     PCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLI
                     PSQADF"
     gene            2128..2331
                     /locus_tag="OQQ57_004196"
     CDS             2128..2331
                     /locus_tag="OQQ57_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HCS1958717.1"
                     /translation="MSSLFLTEDELLILTGCKYASHQRKWLMENELPFYTNRSGKPIV
                     SRDLFTCNKTLPPREVEPNFGAI"
BASE COUNT          800 a          632 c          626 g          570 t
ORIGIN      
        1 ttgaggagag catgcttcta cctgtctccg gtcaggaact gcccattcgt tggcttgctc
       61 aacacggcag cgaaaaacca gtaacgcacg tttcacgcga cgaactccag gcattacaca
      121 ttgcacgggc tgaagaacta ccggctgtta ctgccctggc tatttcgcat aaaaccagtc
      181 tgctcgactc gctggagatt cgcgacctcc acaaactggt tcgtgacact gacaaagttt
      241 tccctaatcc tggtaattca gacctgggac taataactgc ttttttcgaa gcatacttgg
      301 acgctgacta cactgttcgg ggcctgctga caaaagagtg gatgaaagga aatcgtgttt
      361 cacgcatcac ccgcacggct tccggtgcta atgctggtgg tgggaacaaa accgatcgca
      421 atccgaattt agtacacacc ctcgacacac tggatgtgga gattgcagca gccacacttc
      481 cgatggattt taatatttat gaaattccgg gcagcgttta tcgtcgcgca aaagaagtag
      541 tcctgaaaaa agaaagtccg ttcaaagaat ggtccgcagc acttcgtgca cccccgggta
      601 ttctggacta ttcccgcgcc gctatttttg cacttatccg aagcgcacac cctgaatttt
      661 atcactaccc gggacgcctt caggggtata tcaacgccta tttgacggaa actgatcacg
      721 agaaccccag caaggaaact ctcacagcta cccggcatac gccggaaaaa gatatcctgg
      781 aagaaattaa ccgcgaggtg gttactgagc gtgaaacaga agaagaaaaa ccacaaccat
      841 ctgacgcaat ggcaggtgaa caggcaacaa ctgaaacaat ggaaccggat acaactgaac
      901 attgccagaa cgcgcagtcg ctggatgctc agtcgcaggt gagttccgct aaccaagtaa
      961 aagtcaccgc tgacgaagta aacaaaatta tgcaggcagc caatatcagc cagcctgacg
     1021 ccgataagtt acttgctgta tcgcgtggtg aatttgttga ggggattagc gaccctaatg
     1081 atccgaaatg ggtcaagggg atccagactc gcgattctgt gaaccagaac cagcatgaat
     1141 cggaacggaa cgaccaaaaa gcggaacaaa acagcccaaa tgcgttacaa aacgagccag
     1201 aaacgaaaca atccgaacca gtagcgcaac aggaaccgga aaaagtctgc accgcctgcg
     1261 gtcagagcgg tggcggcaac taccctgatt gtggcgcggt gatggacgac gcaacatacc
     1321 agaaaacatt cgatgaagag aatcaggttg aagttcagga aaatgatccg gaggaaatgg
     1381 aaggcgctga acatccacac aaggagaatg ctggcagcgc tcaggaccac gccagcgata
     1441 gtaaaactgg cgagacggca gatcccttaa ttacggtgaa tggtcatcac gaaatcacat
     1501 ccaccagcag gacgtgtgac catctaatga tcgaccttga aaccatggga aaaaatcctg
     1561 atgccccgat catctcaata ggtgcaatat ttttcgatcc gcaaaccgga gatatgggac
     1621 ccgaatttag taagactatc gatctggaaa ctgctggcgg agtcattgat cgggacacca
     1681 ttaaatggtg gcttaagcaa tcacgcgaag cgcaatctgc cattatgacc gatgaaatcc
     1741 cgttagatga tgcactgtta caattgcggg aatttatcga cgaaaactcc ggtgaatttt
     1801 ttgttcaggt ctggggaaat ggagccaact tcgacaacac gattttgcgc cgttcatacg
     1861 aacggcaggg gatcccctgc ccgtggcgtt actacaacga tcgcgatgta cgcacaatcg
     1921 ttgagctggg gaaagccata gacttcgatg ccagaacggc tattccattc gaaggtgagc
     1981 gccataatgc acttgatgac gctcgttacc aggcaaaata cgtttcagct atctggcaaa
     2041 aactgatccc gagtcaggct gatttttaat gttcaaccct aattgccgct aaccgtatat
     2101 agttagcggc ggttatgaga tatagctatg agcagcttat ttttaaccga agatgaattg
     2161 ctaatattaa cgggctgcaa atatgcaagc caccagcgaa aatggttaat ggaaaacgag
     2221 cttccgttct ataccaatcg tagtggcaaa ccgattgtca gccgggatct atttacctgc
     2281 aataaaactt taccaccacg cgaggtagag ccgaattttg gtgcgatctg atgggaagac
     2341 gaaggaaaaa tcctgagcac gaaaaattac ctccaaatgt atacccaaat aaatatagtt
     2401 atgtatggaa accaacatcc agcgaatctg taacactaac cgccatcaag gatggtttag
     2461 ctgctttatg gaaaaagtat gaggaaactg taaataatcg cgatcgtgca atgacattcg
     2521 gtcgcttgtg ggaaaaattc ctcgccagcg cctattacag tgacctcagt ccaagaacac
     2581 aaaaagatta tctgcaacat caaaaaagtt gcttgccgta ttcggtaa
//
LOCUS       DAJVUK010000270         2580 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.274, whole genome shotgun sequence.
ACCESSION   DAJVUK010000270 DAJVUK010000000
VERSION     DAJVUK010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.274"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..2271
                     /locus_tag="OQQ57_004197"
     CDS             <1..2271
                     /locus_tag="OQQ57_004197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCS1958718.1"
                     /translation="NKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAE
                     KDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLF
                     TNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQASSWNTISSYL
                     QRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSS
                     AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLP
                     MMQRPRHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYAL
                     GIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRY
                     TNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNEKNRN
                     ISVGVSGQQWGIGYSLNYQYSRYTDENNDRALSLNLSIPLERWLPRSRVSYQMTSQKD
                     RPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDS
                     SQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVIP
                     YLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRN
                     GKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFNTP
                     DSEPTTSVLQGTAQCH"
     gene            2282..>2580
                     /locus_tag="OQQ57_004198"
     CDS             2282..>2580
                     /locus_tag="OQQ57_004198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1958719.1"
                     /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
                     VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKL"
BASE COUNT          720 a          623 c          603 g          634 t
ORIGIN      
        1 aataaaaaga aggtttcaca gaaaaaaatt acatttaccg ccaatgcaga gcaacttctg
       61 cagccacagt ttacggtaga acaactacgt gagctgggta ttaaggtgga tgaaatcccg
      121 gcgctggctg aaaaagatga cgatagcgtg atcaactcgc ttgaacaaat cattcccggt
      181 acagctgctg aatttgattt caatcatcag cgacttaatt tgagcattcc ccaaattgca
      241 ctgtaccgtg atgcaagagg ttacgtctcc ccttctcgtt gggacgatgg tataccaacg
      301 ctgtttacca actactcgtt tacaggttct gataaccgtt accgccaggg caatcgtagc
      361 caacgacagt acctgaatat gcaaaatggt gctaattttg gcccctggcg attacgtaac
      421 tattctacgt ggacacgcaa cgatcaggcg tcaagctgga acactatcag tagttattta
      481 caacgtgata tcaaggcgtt gaagtctcag ttgcttctgg gagaaagcgc caccagcggc
      541 agtatttttt ccagctacac ctttactggc gtgcaactcg cttccgacga taatatgttg
      601 ccaaacagcc agcgcggatt tgccccaacg gtacgcggta tcgcaaacag tagtgcaatc
      661 gtgactatca ggcaaaatgg ttatgtgatc tatcaaagca acgtgccagc gggtgccttt
      721 gaaattaacg atctctaccc ctcttccaac agcggcgatt tagaagtcac gattgaagaa
      781 agtgacggta cacaacgtcg ctttatccag ccttattctt cattacccat gatgcagcga
      841 cctaggcatc taaaatatag cgcgaccgct ggacgctatc gcgctgatgc aaacagtgat
      901 agcaaggaac ccgaatttgc tgaagccacg gcaatatatg gtttgaataa tacttttacg
      961 ctgtatggcg gcctgctcgg ttctgaagat tattatgcgc tggggatcgg tatcggcggc
     1021 acacttggcg cactgggcgc gttgtcgatg gatatcaaca gagctgacac ccaattcgat
     1081 aaccagcact cttttcatgg ctatcaatgg cgtacgcagt acatcaaaga tatcccggaa
     1141 accaacacca atatcgctgt tagctactat cgctatacca acgatggcta ttttagtttt
     1201 gatgaagcca atacccgcaa ttgggactat aacagtcgcc aaaaaagtga aattcaattc
     1261 aacatcagcc agacaatatt tgatggggta agtctgtatg cctccggttc gcagcaagac
     1321 tattggggca ataacgagaa aaacaggaat atctctgttg gggtttccgg ccagcaatgg
     1381 ggaattggtt acagcctgaa ttatcaatac agccgctaca ctgatgaaaa taatgaccgt
     1441 gcactctctt tgaatctcag tattccgtta gaacgctggt taccgcgtag ccgggtttcc
     1501 tatcagatga ccagccagaa agatcgccca acccaacatg aaatgcgtct tgatggctca
     1561 ctgctggatg atggtcgcct gagctatagc ctggaacaaa gtctggatga cgataacaac
     1621 cataacagta gcctgaacgc cagttaccgt tcaccttatg gaaccttcag tgccggatac
     1681 agttacggta atgacagcag ccaatacaat tacggcgtta ccggcggcgt ggttatccat
     1741 cctcatggcg tgacgctctc gcaatatctg ggcaacgctt ttgcgcttat cgatgctaac
     1801 ggggcttctg gcgtgaggat acaaaactat ccggggattg ctactgatcc ctttggctat
     1861 gcagtgattc cttatctcac gacttatcag gaaaaccgtc tctcggtaga tactacgcag
     1921 ctgcccgata acgtcgatct tgaacaaaca acacagtttg tggtgcccaa cagaggtgca
     1981 atggtagcgg cgcgtttcaa cgccaatatc ggttatcgcg tacttgttac agtcagcgat
     2041 cgcaacggta aaccgttgcc ctttggcgct cttgccagca acgatgatac ggggcaacaa
     2101 agtatcgtcg atgagggcgg catactatat ctctctggga tatcgagtaa atcacaaagc
     2161 tggactgtac gctggggaaa tcaggcagat caacaatgtc agtttgcttt taatacaccg
     2221 gattcagaac caacaacctc tgtattacaa ggtacagcgc agtgccatta aggataaaaa
     2281 aatgaaaaga gcgcctctta taacaggact tttgttgata tccacatcct gcgcttatgc
     2341 ctcctcagga gggtgtggag ccgacagcac tagcggtgcg acaaattaca gcagtgtggt
     2401 tgatgatgtt acggtgaacc agacagataa cgtgacagga cgggagttta cctctgcaac
     2461 gctaagtagc actaactggc aatacgcctg ttcctgctct gcgggtaagg cagttaaact
     2521 tgtctatatg gtcagccccg tacttaccac cactggacat cagacaggat attacaaact
//
LOCUS       DAJVUK010000271         2507 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.275, whole genome shotgun sequence.
ACCESSION   DAJVUK010000271 DAJVUK010000000
VERSION     DAJVUK010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.275"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            670..1209
                     /locus_tag="OQQ57_004199"
     CDS             670..1209
                     /locus_tag="OQQ57_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015870862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HCS1958720.1"
                     /translation="MSHGGWKEISHPQTLFTRQKGDGWTVVPKNLRIDFYTKDNDFTK
                     GLSVLSEVNKRHTEAQKGLTPSLNISKDDLKVLANARNIPQSKLEEEMMSQAIYRKEY
                     ATSNEKIKNYALYYHEQAQNIIQRHQDGLGNKNIDIAFITDKNHKKHLSDIFKVINES
                     GVKYDVIHFGACRVNREEK"
     gene            complement(1435..1758)
                     /locus_tag="OQQ57_004200"
     CDS             complement(1435..1758)
                     /locus_tag="OQQ57_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nikA protein"
                     /protein_id="HCS1958721.1"
                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLR
                     AAALGKNVNSLTDDRVLKEVMRLGALQKKLFIDGKRIGDREYAEVLIAITEYHRALLS
                     RLMAD"
     gene            2031..2225
                     /locus_tag="OQQ57_004201"
     CDS             2031..2225
                     /locus_tag="OQQ57_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HCS1958722.1"
                     /translation="MNKQQQAVLNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHEL
                     AEELQNSIQTRFEVENSTER"
BASE COUNT          835 a          601 c          525 g          546 t
ORIGIN      
        1 ggtatctcag ttcggtgtag gtcgttcgct ccaagctggg ctgtgtgcac gaaccccccg
       61 ttcagcccga ccgctgcgcc ttatccggta actatcgtct tgagtccaac ccggtaagac
      121 acgaattatc gccactggca gcagccactg ataaccgaat tagaggagta agacttgaag
      181 tcatgcgcct gttaaggcta aactgaaaga acaagttttg gtgactgcgc tcctccaagc
      241 cagttacctc ggctcaaaga gttggtatct ctgagaacct tcgaaaaacc gccttgcagg
      301 gcggtttttt cgtttacagg cagtagatta cgcgcagaaa aaaaggatct caagaagaac
      361 ctttaatttt ttttcacact tggtatccta ctttaaccca taaaataaac acttacaccg
      421 acacgccctt aaacaaaaga aaaaaaaaca ataaaaaaca ccgcaaaaat ggattgttaa
      481 caaatgaaaa tactcaattc gaatctcata acaaacatat catcaacaat aagaaatcac
      541 cttctaacat catccaaaaa tataaaaaca cacccatcac caaacatgga cgtaacaagt
      601 catcgtcgtt tattccagaa agacggaata ggattgagcc aaacaggaaa agcaacacaa
      661 cttgtcatta tgtcgcatgg tggatggaaa gagatctccc atccacaaac actattcacg
      721 cgtcaaaaag gcgatggatg gactgtagtc cccaaaaacc taagaattga tttttataca
      781 aaagacaacg acttcacaaa gggactaagc gttctttcag aggtaaacaa acgccatact
      841 gaagctcaaa aagggttaac accatcacta aacataagca aagatgacct aaaagttcta
      901 gcgaacgcgc gcaatatacc tcaatcaaaa ttagaagaag aaatgatgtc acaagccata
      961 tatagaaaag aatacgcaac aagtaatgag aagataaaaa actatgctct atattaccat
     1021 gaacaagccc aaaatattat acaaagacat caagatggct taggaaacaa aaatattgat
     1081 atagcattta taactgataa aaatcataag aagcaccttt ctgacatatt taaagtaata
     1141 aatgaatcag gagtaaaata tgatgtaatt cactttggcg cttgccgagt aaatagagag
     1201 gagaaataat catcatttac cataatccct taattgtacg caccactgaa acgcgctgaa
     1261 cgcgattctg acgcagacac cacaaaaata gatgttttac cccggaaaaa caggaaggat
     1321 gcgtcaggat cgttttcagc tcgctgcata gctatgcatg aaagcgaatg gagatcactt
     1381 tgggagctta ccgtgttcat accgtctgtt ttcaacagtt ttctccccgg gaagctaatc
     1441 tgccataagc ctggataaca gggcacggtg atactccgta atagcgatca gcacctccgc
     1501 atactccctg tccccgatac gcttgccgtc gataaagagt tttttctgta acgcccccag
     1561 tctcataact tctttcagta cccgatcatc agtcagtgag ttaacgttct taccgagagc
     1621 tgccgcccgt aaaaaaccgg aaacggtctt gccgcattca gcagcccttt ttctgatttc
     1681 ctggtcttct tctgccgtca gacgaacagg gcgactgata gcccgcctgc gcgtattact
     1741 tccacttcgt tttgtcataa aacatggctc cgtatctgac atgggtgtcg gggcaaagcc
     1801 ctgaccaggg caattgtaat agcgtgcatg tatgcgcggt ataacaattg cacatcctgt
     1861 cctgtcagca agctcgaatt accgacaaag gcacggcagt tttttggcag ttacagtgtt
     1921 gtctgacaga aatgcccgtc aaaaagccag gcggcagcaa aacagtcgaa aagtggtacg
     1981 cgatataatc acataacgca gatgacagac agaacggaga aaacgaaaag atgaacaagc
     2041 agcagcaagc cgtactcaac atggcgggat tcataaaaag ccagagcctg acgctgctcg
     2101 aaaaactgga cgcactcgat gctgacgagc aggccaccat gtgtgagaaa ctacacgaac
     2161 tcgcagaaga actccagaac agcatacaga cacgctttga agtagaaaat agcacagaga
     2221 gataacgctc aggacaggat gtcgaacggc acaacagagc gtaaggagaa aatgtcacat
     2281 aaggcgctct tccgcttcct cgctcactga ctcgctacgc tcggtcgttc gactgcggcg
     2341 agcggtatca gctcactcaa aggcggtaat gcggttatcc acagaatcag gggataacgc
     2401 cggaaagaac atgtgagcaa aaagccgaag gcagggacaa aggccgcgca ggtggcgttt
     2461 ttccataggc tccgcccccc tgacgagcat cacaaaaatc gacgctc
//
LOCUS       DAJVUK010000272         2444 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.276, whole genome shotgun sequence.
ACCESSION   DAJVUK010000272 DAJVUK010000000
VERSION     DAJVUK010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.276"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..753)
                     /locus_tag="OQQ57_004202"
     CDS             complement(<1..753)
                     /locus_tag="OQQ57_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HCS1958723.1"
                     /translation="MRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRN
                     LPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHH
                     SETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERE
                     LSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQR
                     TKNLALLPHAHQQQNPPQEETVVSIAVDPESPA"
     gene            complement(755..1033)
                     /locus_tag="OQQ57_004203"
     CDS             complement(755..1033)
                     /locus_tag="OQQ57_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958724.1"
                     /translation="MAHDTKFYNSDNSAAPASRHGRRSHAFKSDWYQHDPCTEEQAEW
                     LIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR"
     gene            974..1159
                     /locus_tag="OQQ57_004204"
     CDS             974..1159
                     /locus_tag="OQQ57_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958725.1"
                     /translation="MPAGRRGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQ
                     KKQNPPKRVKCGCVEDA"
     gene            complement(1201..1356)
                     /gene="hokD"
                     /locus_tag="OQQ57_004205"
     CDS             complement(1201..1356)
                     /gene="hokD"
                     /locus_tag="OQQ57_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokD"
                     /protein_id="HCS1958726.1"
                     /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF
                     TAYEPEE"
     gene            complement(2008..2424)
                     /locus_tag="OQQ57_004206"
     CDS             complement(2008..2424)
                     /locus_tag="OQQ57_004206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958727.1"
                     /translation="MTELTKEQLIEEAKLKIAITKCHPNSGMARVEGELFKIARASLE
                     AEPIAWRYRYVKKGVMDSQGELWVGDWKYVPKKEDCNDRPNYEIQALFTAPPVPVTSE
                     ELVKAVHFYEQLKRENPPASGNQINGLTMSVKRPAN"
BASE COUNT          579 a          639 c          572 g          654 t
ORIGIN      
        1 agccggagat tccggatcaa cggcaatgct gaccaccgtc tcttcctgtg gtggattctg
       61 ttgctggtgg gcgtgaggca gcagcgcaag attttttgtg cgctgcttca gtatgctggt
      121 ggcggtctgc tctcccggca cgatgtcgct ttcacggtac attgagcgga ttttttccgc
      181 acgcaacccc agcgaacgac gtaatactgc ttccggtagc gcgtccgcca cctgattgcg
      241 gaccgcccac caggataatt cagccagaga taattcacgc tcctgcgtac cgcttattgc
      301 gtgaccgatg acgtcaatca tccatgctga caggttttga tgagcaagtt gctcgagtga
      361 ttcggatgtc tggtcacgca actggttgtc gcagtgccag cacaacacca ttgcgccggt
      421 accataacgg tgaatgacgg tttcgctgtg atgataatcg ccgtgtggcc actggcagga
      481 tttaatatgg cgcaacagcc agtcagacaa tgcaccagca ccaccagcag cacgaatcac
      541 ccgtgcgtta ctgaaaaacg gcagcaatgt tttgtcttcc actagcggct ggcgaacggc
      601 aggaacgacc ccggacggca gattacgcat gcttttcggt tccggctcca ccagtacccg
      661 ggtattgtgg aataccggca tggattcacg gcctggctta aggaccacca gcccgagttc
      721 cggaaccaga acaggtcgaa gtaatacccg cacattacct ccagatccgt tgctggaatg
      781 tgcaggacgg acgcggtggc cgttcggaat aagggagcct gacgaagatt atccagtgac
      841 gataatcgag actgagggct ttcttaatct cgtatccgtg tctgcggtag cgctgaatca
      901 gccattcagc ctgttcttcg gtgcaggggt cgtgctgata ccagtcagat ttgaatgcat
      961 gagaacgccg cccgtgcctg ctggcaggcg cggcagagtt atccgaattg taaaatttgg
     1021 tatcgtgcgc catctgtttt ctctgctggc gcagcaggtg ccagttgttc aggctgacgg
     1081 atggattgta aaccagaacg accagaaaaa acaaaacccg ccgaagcggg ttaagtgcgg
     1141 gtgcgttgag gatgcctgac acatcagcgg tggcgaggga tttctccccc gccgggtctc
     1201 ttactcctca ggttcgtaag ctgtgaagac agcgacctcc gtctggccgg ttcggattcg
     1261 tacctcgcag aggtctttcc tcgttaccag tgccgtcact atgacggtta aacagatgac
     1321 gataagggcg attaacatcg ccttttgctg cttcatagcc tgcttctcct tgcctttcgg
     1381 cacgtaagag gctaacctac atgtgttcag catggattga gcctcagatt aatgttaagc
     1441 gtcttgcagg acgcgtagtg ttaactgggg cttttctcta tctgcctttt ggtgttcatg
     1501 cctgagacag atagcctcaa gcacccgcag tcattctact taactaagat ttccctgcaa
     1561 accgtttttg tccggcacag taaatatcca actaaaccaa tagcgttcgc tgtatttacc
     1621 gccagtattc aatgcacatg accgccatga acacccctaa aaaaagggca tttatatgtc
     1681 caaacattaa tatcaaaaca tcaatttttt ccatatacct tgctgtgaag atgatgggca
     1741 tacatgatgc gaacaaccag aacgcaacaa acaaaaactg caatgcgttt ttcattattc
     1801 cccctacaat caatgtgcaa taacatttaa acacacctca atttggccgg acatataaat
     1861 atctaaacca gaaaaaatca cttacatagc gttacaaact ctttagtcta aatactcatc
     1921 gtaaaacatt ccccatactt atcagtccgt tccgcgccag gtagcttatt gccttatctg
     1981 gcaacctata atcaggtttc cgctttttca gttggctggt cgtttaaccg acatagttaa
     2041 cccattaatc tggttgccgg atgctggtgg attttcgcgt tttagttgtt cataaaagtg
     2101 cacagcttta accagttctt ctgatgtaac cgggactggt ggggcagtga ataaggcctg
     2161 aatttcatag ttcggcctgt cgttacaatc ctcttttttc ggtacatatt tccagtcacc
     2221 aacccacaac tccccctgag agtccataac accttttttc acgtagcgat atcgccacgc
     2281 tatcggctct gcttccagcg atgcccgtgc aattttgaat aactcgccct ctactcgcgc
     2341 catccctgaa ttggggtggc atttcgtaat cgctattttt aatttggctt cttcgattaa
     2401 ttgttctttt gttaattcag tcattttcat taccgccctt tcag
//
LOCUS       DAJVUK010000273         2437 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.277, whole genome shotgun sequence.
ACCESSION   DAJVUK010000273 DAJVUK010000000
VERSION     DAJVUK010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.277"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..757)
                     /locus_tag="OQQ57_004207"
                     /pseudo
     CDS             complement(1..757)
                     /locus_tag="OQQ57_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     misc_feature    complement(360..476)
                     /locus_tag="OQQ57_004207"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01497"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="AL1L pseudoknot; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /pseudo
                     /db_xref="RFAM:RF01497"
     gene            813..977
                     /locus_tag="OQQ57_004208"
                     /pseudo
     CDS             813..977
                     /locus_tag="OQQ57_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137438.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
     gene            complement(1526..1993)
                     /locus_tag="OQQ57_004209"
     CDS             complement(1526..1993)
                     /locus_tag="OQQ57_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958728.1"
                     /translation="MRIDISHQTRHTPPNMLPREQNCVAMALSACFRQQLNPVVNSLL
                     KERIIHSPKELEHDNAVIRALQKLQIQEVCNSTLWETAKQQLLQKSDGRYFAINSKHL
                     AFPGPGESHAFCCIKYKNAIGINGNNAETQSTHYQPYPYDKVSIWGPFPHNLT"
BASE COUNT          553 a          595 c          629 g          660 t
ORIGIN      
        1 ccctgccatg tgctgacgta agtaaaatca gccacccaca gctggtcagg tcgttctgcc
       61 acgaactgac ggtttacgcg gtcgcctgcg gcaacggctt tccggctgat ggtcgtacgg
      121 acctttttac cccggagaac accggcaagt cccataaccg ccatgagacg tgccacagtg
      181 catctggcca ctctgatacc ttcccgtaac aactgacgcc agactttacg cacaccgtat
      241 acctgatgat tcccatcgta tacgcgcagt atctctttct tcagccagtc atcgcgctgc
      301 gcacgggcac tgcgtttatc aggatgatgt cgctgttgct gacagtggta atacgttgac
      361 ggggcaatat gtagttcact gcataccggt ccgaccccgt acagcttacg cagcttatcc
      421 agcagtggca tcactttttc cagaggcggt cgaactccgc cttcgcaaaa taagcggaag
      481 cctggcgaag gatatcgtta ctgcggcgca gttcacgatt ttcacgttcc agctctttca
      541 gacgctgacg ttcagcggtg gtgagcccgc catcaccgcc tccggtatcc cgctcatgct
      601 ggcgtaccca gacacgcaga gtctccggtg tacagccaat ctttggggca atggaacaaa
      661 ttgccgccca ctgtgagtca tattcgccct gactttccag aaccatacga atcgccctct
      721 gacggacttc gggggaaaaa cgagtatttt tagtcatcct gtttacctct ttctcaggaa
      781 gtttagtctc caggattccc ggggcggttc agaacgaatg ggagagcgcc ttcgtggaat
      841 tgcagaaaat gttttcgctt acgcaacggg acaacgcgat gctgaacgag caggtcatgc
      901 agttgagtca gcaggtgcag cacttgagcg agcggacaga acgcttgagc cagttataca
      961 gcgagaacag gagataaggg acgaacggct gatacaggaa tgcgaacatg agttatccct
     1021 ggagcgtgag cgccagccgg aaatacagga acgcacactg gatggtcctt cactgggatg
     1081 gtaatcagag acaggctaaa atgttgtcag cgcgtttccg gtgcattttt tgggataatg
     1141 gttggttcgg ggggggcacc gggaacgcgc ttcagtcaga ccttgctgaa aacacaggaa
     1201 cgcgttaaaa cgcatacggg cgcgattctg gtgtgtcttt tgttgctgtg ttttgcctct
     1261 attgccagat cgcgctcatt cccctgaact tctgttttcc cgctcaggtc cccgtcttct
     1321 tcgcttccga aagcatgaaa aaaatccgtt tcagctgtct ctggctggca attcctgcgt
     1381 gattcacatg gctgcatagc tatgcatgtg gttaaaattt accgggtgcg atcgcggcag
     1441 tttttcgggt ggtttgttgc catttttacc tgtctgctgc cgtgatcgcg ccgaacgcgt
     1501 ttcagcggtg cgtacaatta agatattacg ttaaattgtg agggaatggt ccccatatac
     1561 tgactttatc atagggatag ggttggtagt gggtcgattg ggtttcggca ttgtttccgt
     1621 taatgccaat tgcatttttg tatttgatgc aacagaaggc gtgagattct cctgggcctg
     1681 gaaaggctaa gtgtttagaa ttgatggcaa aatatcttcc gtccgatttt tgaagtagtt
     1741 gttgtttggc tgtctcccaa agggtgctgt tacaaacttc ttgaatttgt agtttttgca
     1801 gggctcttat tactgcgttg tcatgttcca attctttagg ggagtgtatt attctctctt
     1861 ttaataagct gtttaccaca gggtttagtt gttgtctaaa gcacgcagat aatgccattg
     1921 ctacacaatt ttgttcccga ggaagcatgt ttggcggggt atgccgtgtt tgatgtgata
     1981 tgtctattct catagaaggt ctctggctta tagcatcaac aaatacggct ataaaacaaa
     2041 attttcatag agtgattcaa gatcttcttg agatcctttt ttgcggcgcg taatctgctg
     2101 cctgcaaaca aaaaaaccac cgctaccaac ggtggtttgt ttgccggaat ctagagctac
     2161 caactctttc ttccgaaggt aactggcttg gtggagcaca gataccaaat gctgtccttc
     2221 tagtgtagcc gcagttaggc caccacttca agaactctta atatctcaat ccaccttgta
     2281 cagttaccaa tggctgctgc cagtggcgtt aagtcgtgtc ttaccgggtt ggactcaaga
     2341 cgatagttac cggatgaggc gcagcggtcg ggctgaacgg ggggttcgtg cacacagccc
     2401 agcttggagc gaacgaccta caccgaactg agatacc
//
LOCUS       DAJVUK010000274         2408 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.278, whole genome shotgun sequence.
ACCESSION   DAJVUK010000274 DAJVUK010000000
VERSION     DAJVUK010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.278"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(32..112)
                     /gene="csgC"
                     /locus_tag="OQQ57_004210"
                     /pseudo
     CDS             complement(32..112)
                     /gene="csgC"
                     /locus_tag="OQQ57_004210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309448.1"
                     /note="involved in autoagglutination of curliated cells;
                     not involved in production of curli fibers; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgC"
     gene            complement(171..626)
                     /gene="csgA"
                     /locus_tag="OQQ57_004211"
     CDS             complement(171..626)
                     /gene="csgA"
                     /locus_tag="OQQ57_004211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin major subunit CsgA"
                     /protein_id="HCS1958729.1"
                     /translation="MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSE
                     LNIYQYGGGNSALALQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSAT
                     LDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY"
     gene            complement(667..858)
                     /gene="csgB"
                     /locus_tag="OQQ57_004212"
                     /pseudo
     CDS             complement(667..858)
                     /gene="csgB"
                     /locus_tag="OQQ57_004212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309446.1"
                     /note="CsgB; functions as a nucleator in the assembly of
                     curli (coiled surface structures) on the cell surface;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="curlin minor subunit CsgB"
     gene            1637..2287
                     /gene="csgD"
                     /locus_tag="OQQ57_004213"
     CDS             1637..2287
                     /gene="csgD"
                     /locus_tag="OQQ57_004213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CsgD"
                     /protein_id="HCS1958730.1"
                     /translation="MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQ
                     RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP
                     HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE
                     KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR"
     gene            2292..>2408
                     /locus_tag="OQQ57_004214"
     CDS             2292..>2408
                     /locus_tag="OQQ57_004214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309443.1"
                     /note="chaperone-like protein that participates in the
                     polymerization of curlin (CsgA) subunits into curli
                     (extracellular fibers from Escherichia and Salmonella spp.
                     that are involved in the colonization of inert surfaces
                     and biofilm formation); part of the curli secretion and
                     assembly protein complex; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgE"
                     /protein_id="HCS1958731.1"
                     /translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSI"
BASE COUNT          690 a          522 c          481 g          715 t
ORIGIN      
        1 gaacaaatgg tagtgtccgc tattgccagt acacctcata cacatcccct tgctgggtcg
       61 tattaaaggt tatctgactg gaaagtgccg caaggagtaa taacgcattc atattcttct
      121 cccgaaaaaa aacagggctt gcgccctgtt tctgtaatac aaatgatgta ttagtactga
      181 tgagcggtcg cgttgttacc aaagccaacc tgagtcacgt tgacggagga gttagatgca
      241 gtctggtcaa ctgcagcacc gttgccacca ccgaactgtt taaccgtcat ttcagaattt
      301 ttgccgttcc actgatcaag agtagcgcta ttaccgaagc cacgttgggt cagatcgatt
      361 gagctgtcat ctgagccctg accaacatct gcaccattac cgccgccatg ctgggtaata
      421 gtcaagtcag agttacgggc atcagtttgc agagcaagtg cagagttacc gccaccgtac
      481 tggtaaatgt tcagctcaga atttgggccg ctattattac cgccaccacc gtggttaccg
      541 ccgccgccgt actgaggaac aacacctgcc agagcgctac cggagaatac gattgctgca
      601 attgctgcta cttttaaaag tttcatgtaa aacccccatc ggattgattt aaaagtcgaa
      661 tggaaattaa cgttgtgtca cgcgaatagc catttgcgac tgtctctgca ctacaattgc
      721 cgttttttga gtaccatact gtgtaatatt tgctttatta ccagaacctt tctggataat
      781 catcgcagta ttaccataag caccttgcga aatactggca tcgttggcac tgcccgcctg
      841 atcaatatat gcaaggttat tagactggcc ccctgaatct ccagacaacc agtatcactt
      901 aaataagtga tactggttgt ctggagattc agggggccag tctacgcaac ctgtattttg
      961 ttaacgctgc gttatgatgg aaagtatgtc tgcggaaata tttttaataa ctcacccgcg
     1021 cgttgtattt ttcttttttt gttcatacca aagtattaaa acccacgtaa atacgctgtt
     1081 atctacgcaa aaaatatttt gttttctttt aaatctccgt tttccgctat caaaaatcac
     1141 cagacagtca tttttcttgc ccgtcgctga ttgctgcgat atgtcttgcg cacaagccgt
     1201 gacaaacctc gtctttttgg agtaaaaatt tgtccacgga ggtgcggaga aaaaacaaga
     1261 acgttttaca tgacgaaagg actacaccaa aatatttttt atatgtatta ttagtaagtt
     1321 atcaccattt gtatgatttt ttaaaattgt gcaataaaaa ccaaatgtac aacttttcta
     1381 tcatttctaa acttaataaa accttaaggt taatatttta atataacaag ttacatttag
     1441 ttacatgttt aacacttgat ttaagttttg taatggctag attgaaatca gatgtaatcc
     1501 attagtttta tattttaccc atttagggct gatttattac tacacacagc agtgcaacat
     1561 ctgtcagtac ttctggtgct tctattttag aggcagctgt caggtgtgcg atcaataaaa
     1621 aaagcggggt ttcatcatgt ttaatgaagt ccatagtatt catggtcata cattattgtt
     1681 gatcactaaa ccttctttgc aggcgacagc tctcttgcag caccttaaac aatcgctggc
     1741 aattacagga aaattacata atattcaacg ttctctggac gatatctctt caggctctat
     1801 tattcttctg gatatgatgg aagcagataa aaagcttatc cattattggc aggatacttt
     1861 gagcaggaaa aacaacaata tcaaaatatt gttgctaaat acgcctgaag attacccgta
     1921 ccgcgacatt gaaaactggc ctcatatcaa cggcgttttt tattccatgg aggatcaaga
     1981 acgtgttgtc aatgggttgc aaggcgtcct gcgcggcgaa tgctacttta cgcaaaagct
     2041 tgccagctac ttgattacgc attcaggtaa ctatcgttat aacagcacgg aatcagccct
     2101 ccttactcat cgggaaaaag agatcctgaa taagctgcgt atcggcgcgt ctaataacga
     2161 gatcgctcgt tcgttgttca tcagcgaaaa tacggttaaa acgcatcttt ataatctttt
     2221 caagaagata gccgtaaaaa accggacaca agcggtttcc tgggcaaacg ataacctcag
     2281 gcgataaagc catgaaacgt tatttacgct ggattgtggc ggcagaattt ctgttcgccg
     2341 cagggaatct tcacgccgtt gaggtagaag tcccgggatt gctaactgac catactgttt
     2401 catctatt
//
LOCUS       DAJVUK010000275         2403 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.279, whole genome shotgun sequence.
ACCESSION   DAJVUK010000275 DAJVUK010000000
VERSION     DAJVUK010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.279"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..437
                     /gene="yeeE"
                     /locus_tag="OQQ57_004215"
     CDS             <1..437
                     /gene="yeeE"
                     /locus_tag="OQQ57_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HCS1958732.1"
                     /translation="LIALLAWPLSEATGRMFGLGITSPTANILQFLVAGDVKYINWGV
                     FLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVM
                     TAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN"
     gene            451..678
                     /locus_tag="OQQ57_004216"
     CDS             451..678
                     /locus_tag="OQQ57_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HCS1958733.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(721..2145)
                     /gene="sbcB"
                     /locus_tag="OQQ57_004217"
     CDS             complement(721..2145)
                     /gene="sbcB"
                     /locus_tag="OQQ57_004217"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HCS1958734.1"
                     /translation="MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGE
                     PEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYN
                     NVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGL
                     PSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMA
                     LIDVPQMPPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSD
                     TLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLK
                     ILRENPQVREKVVAIFAEAEPFTPTDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPA
                     LDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLV
                     QQYADDKEKVALLKALWQYAEEIV"
BASE COUNT          580 a          572 c          620 g          631 t
ORIGIN      
        1 gtttgattgc gcttttagcc tggcccctga gtgaagcaac cggacgcatg tttgggttag
       61 gaatcacttc cccaacggcc aatattctgc aatttctggt cgcgggtgac gtgaaataca
      121 ttaactgggg cgttttcctg gtgttaggga tcttcgtggg gtcatttatt gcagccaaag
      181 cgagccgtga gttccgcgtt cgcgcagctg atgcacaaac aacattacgt agcgggttag
      241 gtggtgtact gatgggcttc ggtgccagta ttgcaggtgg ttgctctatc ggtaatggac
      301 tggttatgac tgcaatgatg acctggcagg gctggattgg ccttgtattt atgattctcg
      361 gagtctggac tgcatcctgg cttgtgtatg ttcgaccgca gcgtaaggcg cgactggcga
      421 ctgctgcggc aaattaagta aggtgtaaag atggcgatta aaaagctgga tgtggtgacg
      481 caggtctgtc cgtttccact catagaagca aaagcagcac tggcagaaat ggccagcggc
      541 gatgagttgg taattgagtt tgattgcacc caggcaactg aagcaatccc acagtgggcg
      601 gcagaagaag gacatgccat caccgattat cagcagattg gcgatgcagc gtggagcatc
      661 accgttcaaa aagcctgact caacattgtc ctccgccgta ccagcggcgg aggcttcaaa
      721 ttagacgatc tcttccgcgt actgccaaag tgcttttaac agcgccactt tttctttgtc
      781 atcggcatat tgttgtacca gcatctgcaa ttcatcagca taaccctgca aaaactctgg
      841 cgtgaatacc tggcggcggt gctccagcca gcgttgctgc tcggcataat ccagcgtccc
      901 cgggaagttg cgtgcccgat aattgaacaa cagcttttca atccgtttat caacaaaagt
      961 gatatccagt gccggtaaat tacgtggctc ggtttccagc acaattttca ttgctgcacg
     1021 atctgcgtca ctgaaaaagc cgttataaag ctgtgcatcc acgttatctg taggcgtaaa
     1081 cggttcggct tccgcgaata tcgccaccac tttttcacgc acttgcggat tttcacgcag
     1141 aattttcagg ttatcgaggc aatgctgacg attaattccc agtcggtcgg catcttccgg
     1201 gcgtagcgta ttcgcctggg ccagcaccgg acatttattg atgtgcacca gcttaaccgg
     1261 aacggcggcg ttatcgccaa gatcggtttt tgcggtatat aaacgctcgc gcaatgtgtc
     1321 gctatccagt tccagtaatg gcgaaatgtc tcctgccaaa tccaccataa ttacagcatt
     1381 gcgattttca ggatgccacg ccagcggtgc cacccagctg gtattgccgc gccatgcccc
     1441 aaacattccg gaaacgtgaa ccaggggggg catctgcgga acatcaatca acgccatcag
     1501 tttgtgttta ttacgatggg taaagagata atcaaacagg cgtggctgac gcgtttttac
     1561 cagtttcgcc atcgcaatag tggcgtacac atcagccatc gcatcgtggg cgttgctatg
     1621 ttcaatacca ttcgctttgg ttaaatgctc aaggcgaaag ctcggtagac cgtcatcatt
     1681 ttcaggccag tttattcctt ccgggcgcag ggcataacag gcacgcataa catccaacaa
     1741 atcccagcgc gagttatcat gctgccagct ccaggcgtaa ggatcgtaga aattacgata
     1801 aaaaacgttg cgtgtgactt cgtcgtcgaa acgcacattg ttgtagccca gaatacaggt
     1861 cttcggtacg gtaaaaagcg agtgaatacg ggcggcaaac gcggcttcgt tttctccttt
     1921 cgcccgtgct tcctgcgggg taataccggt aattaatact gctccaggct ggggtaaata
     1981 gtcatccgcg ggcttgcagt aaaagacttc gggttcgccg atgacattga attcgctatc
     2041 ggtgcgaatg gctgcgaact gtgcagggcg atctaacgcg gggtgcgtgc caaaggtttc
     2101 gtaatcgtga aagaggaagg taggttgttt atctgtgtct gtcattgtct agcattgtcc
     2161 actgtagtta attaactgtc tgttataact cgaaaaacaa ccattttttc acctgagtat
     2221 gtctacgaac gtcaaatata gttgtttact gtgcgctgtt gtccatgtga tattgtgtac
     2281 cagatgtgta ccaaaccatt atttctgagc gtaccaaata ttatttatgg ctataagcga
     2341 cacaaaactg cgtagtattt atggtaaacc atattcgggc ccacaagaag tggctgatgc
     2401 cga
//
LOCUS       DAJVUK010000276         2397 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.280, whole genome shotgun sequence.
ACCESSION   DAJVUK010000276 DAJVUK010000000
VERSION     DAJVUK010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.280"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            128..1264
                     /gene="potA"
                     /locus_tag="OQQ57_004218"
     CDS             128..1264
                     /gene="potA"
                     /locus_tag="OQQ57_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HCS1958735.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMREGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            1248..2111
                     /gene="potB"
                     /locus_tag="OQQ57_004219"
     CDS             1248..2111
                     /gene="potB"
                     /locus_tag="OQQ57_004219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309597.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HCS1958736.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVSELDD"
BASE COUNT          571 a          587 c          604 g          635 t
ORIGIN      
        1 ctaagccagt aattcacaac aaagattggc gattcaagcg gtttgccgta gaattaccgc
       61 cctcattaag agtcaccaag gtggttaacc acaaaccccg catcggtaag ccatccgttg
      121 cgtttacatg ggacagagta aaaaattgaa taaacaaccg agttcgcttt caccgctggt
      181 gcaattggcg ggaattcgca aatgctttga tggtaaagag gtcattcccc agctggatct
      241 gactatcaac aatggcgagt tcctcacgct gcttggccct tctggctgcg gtaaaacaac
      301 cgttcttcgc ctgattgcag gtctggaaac tgttgattcc ggacgcatca tgctggataa
      361 cgaggacatc acccacgttc cggcggaaaa ccgctatgtg aacactgttt tccaaagcta
      421 cgcacttttc ccccacatga ccgtgttcga aaatgtggcc tttgggttgc gcatgcaaaa
      481 aacccccgct gctgaaatta cgccccgcgt gatggaagcc ctgcggatgg tgcaactgga
      541 aaccttcgct caacgtaaac cgcatcagct ctctggtggt caacagcaac gcgtcgccat
      601 tgctcgcgcg gtggttaaca agcctcgtct gttgttgctg gatgagtcgc tctcagcgct
      661 ggattacaaa ctgcgtaagc aaatgcagaa cgagctgaaa gcgttacagc gtaagcttgg
      721 cattacattc gtcttcgtga ctcacgacca ggaagaagca ctcaccatgt cagacaggat
      781 tgtggtgatg cgcgagggtc gcattgagca agacggcacg ccgcgtgaaa tctacgaaga
      841 gccgaaaaac ctgtttgttg ccggcttcat tggcgaaatt aatatgttta acgccacggt
      901 gatcgagcga ctcgacgagc agcgcgtacg cgccaacgtt gaaggccgcg aatgtaatat
      961 ctacgttaac ttcgccgttg aaccggggca aaaactgcat gttctgctgc gcccggaaga
     1021 cttacgtgtt gaagagatta acgacgacaa ccacgctgaa gggctgattg gttacgttcg
     1081 tgagcgtaac tacaaaggca tgacgctgga gtcggttgtt gaactggaaa atggcaagat
     1141 ggtgatggtc agcgaattct tcaatgaaga cgatcctgac tttgaccact ctctcgacca
     1201 aaaaatggcc attaattggg tagaaagctg ggaggtcgta ctggctgatg aagaacacaa
     1261 gtaagttcca gaatgtagtg attgtcacta ttgtcggttg gcttgtgttg tttgtctttc
     1321 tgcccaacct gatgatcatt ggcaccagct ttttgacccg cgacgacgcc agtttcgtca
     1381 aaatggtctt tacgctggat aactacacgc gtctgctcga tccgctctat tttgaagtgc
     1441 tattgcactc gctgaatatg gcgctgatcg ccaccctcgc ctgcctggtg ctgggctatc
     1501 catttgcctg gtttctggcg aagctgccac acaaggtgcg tccgctgctg ctgtttctgc
     1561 tgattgttcc gttctggacc aactcattga ttcgtatcta cgggctgaaa attttcctca
     1621 gcaccaaagg ctatctcaac gagtttttgc tctggctggg cgttatcgac acaccaatcc
     1681 gtatcatgtt cacgcccagt gcggtgatta tcggtctggt ttacattctg ctgccgttta
     1741 tggtgatgcc gctgtactcc agtatcgaaa aactggataa gccgttgctt gaggcggcgc
     1801 gcgatctcgg tgccagcaag ttacagactt ttatccgcat cattattcca ctgacgatgc
     1861 cggggattat tgccggatgt ctgctggtga tgctgccagc gatgggcctg ttctatgtgt
     1921 ccgacctgat gggcggtgcg aaaaacctgc tgatcggtaa cgtcatcaag gtacagttcc
     1981 tcaatattcg tgactggccg tttggtgcag ccaccagcat tacgctgact atcgtaatgg
     2041 gcctgatgtt gctggtttac tggcgcgctt ctcgtttgct gaataagaag gtgagcgaat
     2101 tagatgatta atcatttata ttcaatgcat taagtttgtt tttgagtggt tttgccgttt
     2161 aaggtaacgg cgttatagat cctatcaaaa tcaatcaatt ccattctggt tttggcgaaa
     2221 gatttttcga gagcttcggt ctttaactaa aactgattgc gtataacccc aatacccctc
     2281 cccgactatc tgaattgtcg gggaggcact tcacgcacaa aatatcatcc ctgcgccgtt
     2341 gattactctg caggtgaagt cggccactca atatcaggtg cagttgatgt atcaaca
//
LOCUS       DAJVUK010000277         2327 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.281, whole genome shotgun sequence.
ACCESSION   DAJVUK010000277 DAJVUK010000000
VERSION     DAJVUK010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.281"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(464..655)
                     /locus_tag="OQQ57_004220"
     CDS             complement(464..655)
                     /locus_tag="OQQ57_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HCS1958737.1"
                     /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDH
                     ADELYRSCLARFGDDGENL"
     gene            720..1043
                     /locus_tag="OQQ57_004221"
     CDS             720..1043
                     /locus_tag="OQQ57_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HCS1958738.1"
                     /translation="MLTIRVTDDEHARLLERCEGKQLAVWMRRVFLGEPVARSGRLPT
                     LAPPLLRQLAAIGNNLNQTARKVNSGQWSSGDRVQVVAALMAIGDELRRLRLAVREQG
                     TRDDS"
     gene            1033..>2327
                     /locus_tag="OQQ57_004222"
     CDS             1033..>2327
                     /locus_tag="OQQ57_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HCS1958739.1"
                     /translation="MIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEVRELI
                     DATPFAKKYTSGVLSFAEKALPAGGREKVMASFERVLMPGLEKNQYSILWVEHQDKGR
                     LELNFVIPNMELQTGKRLQPYYDRADRSRIDAWQTLVNHHYGLHDPNAPENRRTLTLP
                     DNLPETKQALAESITRGIDALYHVGEIKDRQDVIQALTEAGLEVVRVTRSSISIADPN
                     GGKNIRLKGAFYEQSFTDGRGVREKAERESRIYRENAERRVQEARRICKQGCDIKRDE
                     NQRRYSPVHSFDRGITEKTPGRGERGDDAAQEGRVKAGREYGHDVAGDGYFPVYREWR
                     DALVSWQDDTGEPGRNQEAERESGEAEREDMGRALSRGEQRTFSGVARGDESRNELDD
                     GKRETECRKAGTGVTEHDGAGKTFAERIRATATGLYAAA"
BASE COUNT          567 a          544 c          741 g          475 t
ORIGIN      
        1 gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa cgccatcggc
       61 gcggccttct tcctgttcct ggtcttttgc tcacatgttc tttccggcgt tatcccctga
      121 ttctgtggat aacagcattt cgtttttgag tgagtagata ccgctcgccg cagtcgaacg
      181 accgagcgta gcgagtcagt gagcgaggaa gcggaaaagc gcctggacgt gcattttctc
      241 cttacgcatc agtgcggcat ttcacacccg gtatggcgca cttttcatac aatccgcact
      301 gatgccgcat ggtgaagcca gtatacactc cgctatcgct acgtgactgg gtcatggctg
      361 cgccccgaca cccgctaaaa cccgctgacg cgccctgacg ggcttgtctg ctcccggcat
      421 ccgctcacag ataagctgtg accgtctccg ggagctgcat gcgtcagagg ttttcaccgt
      481 catccccgaa gcgagcgagg caactgcggt aaagctcatc ggcgtggtcg tgaagcgatt
      541 cacagatgtc tgcctgttca tccgcgtcca gttcgttgag cttctccagc agcgttaatg
      601 tctggcttct gataaagcgg gccatgttaa gggcggtttt ttcctgttta gtcactgatg
      661 cctccgtgta agggggattt ctgttcatgg gggtaatgat accgatgaaa cgcgagagga
      721 tgctcacgat acgggttact gatgatgaac atgctcgttt gctggaacgt tgtgagggta
      781 aacaactggc ggtatggatg cggcgggtct tcctggggga gccggttgcc cgttccggga
      841 ggctgccgac actggcaccg ccgttactgc gtcagctggc cgccatcggg aataacctga
      901 atcagacagc gaggaaggtg aacagcgggc agtggtcttc cggtgaccgg gttcaggtgg
      961 tggccgcact gatggccatc ggggatgagc tgcgccggct gcgtctggcc gtcagggaac
     1021 aggggacgcg ggatgatagt taagtttcat gccaggggaa aaggtggtgg cagtggtccg
     1081 gttgattacc tgctgggaag ggagcgtaac cgggaagggg caacggtgct tcagggtaat
     1141 ccggaagaag tccgggaact catcgatgcc acgccatttg cgaagaaata cacgtccggt
     1201 gttctctcgt tcgcggagaa ggcgctgcca gcgggaggac gtgaaaaagt gatggcgagt
     1261 tttgagcgtg tactgatgcc cggtctcgaa aaaaatcagt acagcatcct gtgggtggag
     1321 caccaggaca agggacggct tgagctgaat tttgtcattc cgaacatgga gctacagacc
     1381 ggaaaacgcc tccagccgta ctacgaccgg gcagacaggt cgagaattga tgcctggcag
     1441 acgctggtga atcaccatta cgggctgcat gacccgaacg ccccggagaa ccgccggacg
     1501 ctgactctcc ctgataacct gccggaaacg aaacaggcgc ttgctgagag cattacacgg
     1561 gggatagacg ctctttatca tgtcggggag ataaaagacc gtcaggatgt gattcaggcg
     1621 ctcacagagg cggggcttga agtggtcagg gtgacgcgaa gcagtatcag cattgcagac
     1681 ccgaacggcg ggaagaatat cagactgaaa ggagcattct atgagcaatc ttttacagac
     1741 gggcgcggag ttcgagaaaa agctgaaaga gagagccgaa tctacagaga aaatgctgaa
     1801 cgacgagttc aggaagctcg aagaatctgt aagcaaggct gtgacatcaa acgagacgaa
     1861 aatcaaagac gctatagccc tgttcacagc ttcgacagag gaatcactga aaaaacaccg
     1921 ggaaggggtg aaagaggcga tgatgcagca caggaaggac gtgttaaagc tggcagggaa
     1981 tacgggcatg atgttgctgg ggatggttat tttcctgttt accgtgagtg gcgggacgct
     2041 ctggtatctt ggcaggatga tacaggcgaa cctggaagaa atcaggaagc agaacgagag
     2101 tctggagaag ctgaacgcga agacatgggg cgtgcgttat cacgagggga gcaacggacg
     2161 ttttctggtg ttgcccgagg ggatgaaagc cgaaacgaac tggacgatgg aaaacgggaa
     2221 acagaatgcc gtaaggctgg tacaggagta acagagcatg acggagctgg aaagacattt
     2281 gctgaacgca ttagagcaac tgcaacagga ctatatgcag cggctga
//
LOCUS       DAJVUK010000278         2289 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.282, whole genome shotgun sequence.
ACCESSION   DAJVUK010000278 DAJVUK010000000
VERSION     DAJVUK010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.282"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            47..346
                     /locus_tag="OQQ57_004223"
     CDS             47..346
                     /locus_tag="OQQ57_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1958740.1"
                     /translation="MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVTIKGVEERRITY
                     RREGYEYDCVMPVYQFRRDFSLVQAAPRSKPTSREKARANIQEIKKMLNVFRGKK"
     gene            343..1743
                     /locus_tag="OQQ57_004224"
     CDS             343..1743
                     /locus_tag="OQQ57_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCS1958741.1"
                     /translation="MKSAPNLKKQPYDKMTEVIIFAGSDAWAHAKQWQEQDGRLAGDN
                     VPPVVLADDQLDELADLRIIDEGRYCVRLYKAGHIRPSNINAIAHKLAAAGVTDANYY
                     PEGMHSHMRENWREYLERVRGKEPVEEKNHQRKTTLPMSVGSTGYDTQLDYVVKGIIP
                     AVSLCSIYGASGSYKSFLAGSWACHVATGRQWGGRRVAHGAVLYVVGEGGIGVPRRVK
                     AWEVVHDEQVKNLYLVNRPIFPAAPLDVDEMVIAARQVERETGKPVRMIILDTLARCF
                     GGNDENDSRDMGAFIRGCDELKRRTGATVLVVHHSGKDETKGARGSSAFRASLDAEYR
                     IRREDAGSKALVISCTKMKDAEELKEAAYDLRVVELFTDADGELITSLVVVDDPRPPV
                     ELERIEEAGNKTENHTALWGCIRSRTQNGDKCTIPLLRDDMKKLGYEMKNFRRWLYKL
                     EKDGVIRIDGDDVAPL"
     gene            1944..2195
                     /locus_tag="OQQ57_004225"
     CDS             1944..2195
                     /locus_tag="OQQ57_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958742.1"
                     /translation="MTQKRRDRTEPKYKALDMTEHTLKVAIRTIDRHTREGYAKEHPD
                     LISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEVEL"
     gene            2192..>2289
                     /locus_tag="OQQ57_004226"
     CDS             2192..>2289
                     /locus_tag="OQQ57_004226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCS1958743.1"
                     /translation="MTAQIAAYGRLVDDPQVKQTSKGTPMTLARMAV"
BASE COUNT          654 a          520 c          677 g          438 t
ORIGIN      
        1 tattgcacga cagatataaa gaacagcaca ccggagaata aaaataatga aacttaaata
       61 ttctggctta actgccagtg gcaacactca ccctaaattt acgcgcggcg atatttaccg
      121 cgaccagtac ggcggcaccg taacgattaa aggtgtagaa gagcgacgca ttacctaccg
      181 ccgtgaaggc tacgaatatg actgcgtgat gcctgtttat cagttccggc gtgatttttc
      241 tctggtacag gcagcgcccc gcagtaaacc aaccagcagg gagaaagcac gcgccaatat
      301 tcaggaaata aaaaagatgc ttaacgtatt caggggcaag aaatgaaaag cgcaccgaac
      361 ttaaaaaaac agccttacga caagatgacc gaagtcatca tttttgcggg tagtgatgcg
      421 tgggcacatg cgaaacagtg gcaggaacag gacgggcgac tggctggcga taatgtgcct
      481 cccgttgtgc tggctgatga tcaactggat gaactggcag acctgagaat catcgacgag
      541 gggcgctatt gtgtccggct gtacaaggca ggccacatca ggccatcaaa tattaatgcc
      601 attgcgcaca agctggcggc ggcgggtgta actgatgcga attattaccc cgaagggatg
      661 cacagccata tgcgggagaa ctggcgcgaa tacctggaac gggtgcgcgg gaaagagccg
      721 gtggaagaaa aaaaccacca gcgaaaaacc acgctaccga tgagcgttgg atctaccgga
      781 tacgacacgc aactggatta cgtggttaag gggattattc cggcggtatc gctatgcagc
      841 atatacgggg ctagcgggtc ctataaatca ttccttgccg gatcgtgggc gtgccatgtt
      901 gccactggtc gccagtgggg aggccgcagg gttgcacatg gtgcggttct ctatgtggtt
      961 ggtgaaggcg gtatcggcgt tccgcgtcgt gtaaaagcct gggaggttgt gcacgatgag
     1021 caggtgaaaa atctgtatct ggtaaaccgc cccatctttc cggctgcccc gcttgatgtt
     1081 gatgaaatgg ttatcgctgc ccgtcaggtg gagcgggaaa cgggtaaacc tgtacgcatg
     1141 attattctgg atacgctggc gcgttgcttt ggtgggaatg atgaaaatga ttcccgtgat
     1201 atgggggcgt ttatccgtgg ttgtgacgaa ctgaaacgac gcacaggggc cacggtgctg
     1261 gtggttcacc attccggcaa ggatgagacg aaaggcgcgc gcggttccag tgcatttcgt
     1321 gcttcgctgg atgctgaata ccggatacgc agggaggacg caggaagcaa agcgctggtt
     1381 atctcatgca ccaaaatgaa ggacgcggag gaactcaaag aagccgcata tgacttacgc
     1441 gtggtggagc tttttaccga cgctgacggt gaattaatca cgtcgctggt ggtggtggat
     1501 gatccgcgcc ctcctgttga actggagcgc atcgaggagg cagggaacaa gacggaaaac
     1561 cataccgcgc tatgggggtg catccgttca cgcacacaga acggcgacaa gtgcacgatc
     1621 ccgctgttac gtgatgacat gaaaaagctg gggtatgaaa tgaaaaactt ccggcgctgg
     1681 ctgtacaagc tggaaaaaga tggggttatt cgtatcgatg gggatgatgt agcgccgcta
     1741 taaaagtgag gagcaaaagc gagggggata gaaagagggc caaaattagc ccgctctccc
     1801 tcacttttcg acctgtatac atcctcaaaa gtgaggggta aaaaaatact tataaaacac
     1861 acacatagaa aaaccgaaaa tcccaactgc gacgaagtga gacgcttgaa aaagtgaggc
     1921 gaaaaagtga gaggttgcga gaaatgaccc aaaaacgcag agacagaaca gagccaaaat
     1981 ataaagcgtt agacatgact gagcacacct taaaggtggc aatcagaacg atagaccgcc
     2041 acacgcggga aggatacgcg aaggaacatc ccgacctgat aagcgcattc atgaccacgg
     2101 cggcggcaaa ctttgccacg ctgacagaac gggagattgc cgaagcggaa caggtaacaa
     2161 ccatcaacgt taaaaccgga gaggtggaat tatgacggca cagatagccg cttacgggcg
     2221 gctggtggac gacccgcagg taaaacagac cagcaagggc acaccgatga cgctggcgcg
     2281 tatggcggt
//
LOCUS       DAJVUK010000279         2283 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.283, whole genome shotgun sequence.
ACCESSION   DAJVUK010000279 DAJVUK010000000
VERSION     DAJVUK010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.283"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            368..2020
                     /locus_tag="OQQ57_004227"
     CDS             368..2020
                     /locus_tag="OQQ57_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HCS1958744.1"
                     /translation="MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHG
                     HFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIR
                     GMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFTR
                     QNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHM
                     GHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCV
                     PDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSF
                     YTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSA
                     LTERIDADFAVVSGGEIRDSIESGNITYKDILKVQPFGNTVVSIDLTGKEVADYLATV
                     AQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPR
                     IDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ"
     gene            complement(2007..2207)
                     /locus_tag="OQQ57_004228"
     CDS             complement(2007..2207)
                     /locus_tag="OQQ57_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958745.1"
                     /translation="MTKKLAALQHQLSRKVKFSNNRQKQKHKIQQLHSHIANIRRDYF
                     HKVTATVSKKHVMIVNYVITAN"
BASE COUNT          709 a          422 c          534 g          618 t
ORIGIN      
        1 atcggaaacg atgatctggc agcctgagtt cacagataaa acattctcca ggaaacttgg
       61 ggcggttcac gtcagtatca gaccatatta attgctgaaa ctgataaaca tcaaacctta
      121 tagaagggtg aatgctgaaa gggggctatg gtgatcgacg tgatgacaac gacaggtaag
      181 accgtgacct gataaacctg aattgtgtcc tagacataaa gtcggtgaag ggaataaggc
      241 tcaggtcagc gaatcttata gtggcccgca gctctgactg caataaggcc ggatacagag
      301 cagcaactac tcgtcgatgt cagaacaacg gaagccttgc aaacggggat gcgttcatac
      361 aggtacaatg ataccgttaa aaaaaaacat tacgctaata atgttcaccc tgtcattact
      421 gacaggaaat cctgctatag cgtatgaaac agataaagta tataaaataa ccgttctgca
      481 tacaaatgac caccatggac acttttggcg taacaatcat ggtgagtacg ggttatcctc
      541 ccaaaaaact ctggtggaca atatccggca gaaagtaata aataatggcg gaagtgttct
      601 attattatct ggtggtgata ttaacaccgg tgtacctgaa tcagaccttc agaaggctga
      661 acccgatatt cgtggaatga atctaattgg ttatgatgca atggccgtcg gtaatcatga
      721 atttgataat cctctaaata tattacgtca gcaggaaaaa tgggccacat ttcctttcct
      781 ttctgctaac atatatcaaa aaagtacagg gaggcgttta ttcagtccat ggaaaatttt
      841 cacccgtcag aatttgaaaa ttgcagtcat tggcttgacg acagatgata ctgcgaaaac
      901 aggaaattct gaatatttta ctgatattga gttccgtcaa cctgctgctg aggcgaggag
      961 tgtcattgat gaacttaatc agcaggaaaa gccagatatt attattgcgg caacacatat
     1021 ggggcactat gacaatggcg agtcaggttc gaatgctcct ggtgatgttg aaatggctcg
     1081 cagtttgccg actggctcat tagcaatgat tgtgggagga cattcacaag ctcctgtctg
     1141 catggccagc gataataaaa aacagtggaa ttatattccg gggacaacct gtgtaccaga
     1201 taaacaaaat ggcatctgga ttgtacaagc gcatgagtgg ggaaaatatg tcggtcaggc
     1261 tgattttgaa ttctgtaacg gtacaatgaa actggttaat tatcagttac acccagttaa
     1321 tctcaaaatg agaattacca gagaagatgg aaaaacggaa ttttcttttt acacccccga
     1381 aattactgaa gatccacaga tgttatcctt actgacacca ttccagaata aaggcaaagc
     1441 acaactggat gtgaaggttg gggttgtgaa cggacgtctg gaaggggaca gaagtaaagt
     1501 tcgttttgtt cagaccagta tgggccatct gattctgagc gctctgacag aacgtattga
     1561 cgcagatttt gctgttgtga gtggtgggga aattcgagat tccatagaga gtggtaacat
     1621 cacatacaaa gatatactga aagttcagcc atttggtaat acggtagtaa gtattgattt
     1681 gacggggaaa gaagtagctg actacctagc tacagtggca cagatgaaac cggattccgg
     1741 agcctaccca caatttttga ataccagctt tgtagtcaaa aaaggaaaaa tcgaaatgct
     1801 aaaaataaaa ggtaaatcgg ttgaccttaa caaaaaatat cgtatgacaa catttagctt
     1861 taatgctact ggtggggatg gctatccacg tattgataat agacccggat acataaatac
     1921 cggatttatt gatgctgaag tacttatcga atatatccgg gaacattcac cgctggatgc
     1981 tgcttcatat gaaccaaaag gtgaagtcag ttggcagtga taacgtaatt gacgatcatc
     2041 acgtgttttt tgctgacagt cgctgtgact ttgtgaaagt agtctctgcg gatgtttgcg
     2101 atatgggaat gcagttgctg tattttgtgt ttctgcttct gcctgttgtt gctgaattta
     2161 accttgcggc ttaactgatg ttggagcgct gccagcttct tcgtcaattt cgctgattaa
     2221 agtttattca ttatggcatg atctgcgtaa gcggctcgtc agaaccgtat tgatatttac
     2281 taa
//
LOCUS       DAJVUK010000280         2277 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.284, whole genome shotgun sequence.
ACCESSION   DAJVUK010000280 DAJVUK010000000
VERSION     DAJVUK010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.284"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..351)
                     /locus_tag="OQQ57_004229"
     CDS             complement(<1..351)
                     /locus_tag="OQQ57_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPC domain-containing protein"
                     /protein_id="HCS1958746.1"
                     /translation="MKIKSISKAVLLFALLTSTSFAAGKNVNVEFRKGHSSAQYSGKI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP
                     ASGKYELRVLQTRND"
     gene            593..886
                     /locus_tag="OQQ57_004230"
     CDS             593..886
                     /locus_tag="OQQ57_004230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HCS1958747.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK"
     gene            958..1617
                     /locus_tag="OQQ57_004231"
     CDS             958..1617
                     /locus_tag="OQQ57_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HCS1958748.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            1709..2155
                     /locus_tag="OQQ57_004232"
     CDS             1709..2155
                     /locus_tag="OQQ57_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309703.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HCS1958749.1"
                     /translation="MNDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIY
                     FTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDL
                     PVWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
BASE COUNT          592 a          490 c          588 g          607 t
ORIGIN      
        1 gtcgtttcgg gtttgcagca ctcgcagctc atatttgcca gaagcaggga gtgagtattg
       61 tccgtgacta tcgagttctg gggaatatct ggataaatca acagaatcat cgattcctgg
      121 cccgaagagg taagtatcag cgccttcatt agagatactc acatgtactt tctgaccttt
      181 tttggcatag aaggtatatg tatcgtaatc gtatcccttt attttgccgg agtactgagc
      241 gctgctatgg ccttttctga actcaacatt gacattctta cccgcagcaa agctcgtgga
      301 ggttagcagt gcaaacagca atacagcctt actgatgctc ttgattttca ttggtagtct
      361 cctgttcaga atgagtacga tgaactgtta taatataaca atccctaacg ggagaattcc
      421 agtggctttt ctgcgttcgg taaaatcccg gcgcggcatt ttttgccggg gggattactt
      481 ataaaggggc atggactcaa caaaccgcag aaatctacag ctggctggct tgtggcgcgg
      541 gtttcattga tgttagctta tgccaaaacc tggcatctta aagagtaaaa gtatgttttg
      601 tgtgatttat cgaagcagca agcgtgacca gacctattta tatgtcgaaa aaaaagacga
      661 tttttcgcgt gttcctgagg aactgatgaa aggttttggt cagcctcagt tagcgatgat
      721 tctgccgttg gatgggcgga agaaactggt caatgctgat attgaaaagg ttaaactggc
      781 attaaccgag caaggttact atttgcagtt accgccacca cccgaagatt tgctgaagca
      841 acatctttcc gtcatggggc agaaaacaga cgacacgaac aaataaccga tatccggcgg
      901 tggcattatc tttgtcggcg cgggttttca tatccacgat aaggtgaggg gaacgttatg
      961 tatcaacatc acaactggca aggtgcgctg ctggattatc cggtgagtaa agtagtctgt
     1021 gttggcagta actatgccaa acatattaaa gagatgggca gcgcagtgcc cgaagagcca
     1081 gtgctgttta ttaaaccaga aacggcactg tgcgatctgc ggcagccatt ggcgatccca
     1141 tccgatttcg gttcagttca tcatgaagtc gaactggcgg tgttgattgg tgcgacgctg
     1201 cgtcaggcaa cggaagagca tgtccgcaaa gccattgccg gttacggcgt ggcgcttgat
     1261 ctgacattgc gtgatgttca gggaaaaatg aagaaagccg ggcagccgtg ggaaaaggct
     1321 aaagcgtttg ataactcttg tccgctttcc gggtttatcc ccgcggcgga atttaccggc
     1381 gatccacaaa atacaacgct gggcctgagc gtaaacggcg aacaacgcca gcaaggtacg
     1441 actgcggaca tgatccataa aatcgttccg ttgatcgctt atatgagcaa gttttttacc
     1501 ctcaaggccg gtgacgttgt gttgacaggc acgcctgatg gcgtcggccc gttgcaaagc
     1561 ggtgatgagc tgacagtcac tttcgatggg cattctttga caactcgcgt tttgtaatac
     1621 tttttgccgc ctgaaagcgg cggcaaaact tgcatcgctg tgccagactg gttataaggt
     1681 gcgttttaac gtaatggcgg aacacctgat gaacgatgta cctttctggc aaagtaaaac
     1741 cctggacgaa atgagcgatg cggaatggga gtcgttgtgt gatggttgcg gtcagtgttg
     1801 cctgcataaa ctgatggatg aagacaccga cgaaatctac ttcactaacg tcgcctgtcg
     1861 ccagctcaat attaaaacct gtcaatgtcg gaactacgaa cgtcgtttcg agtttgaacc
     1921 cgactgcatt aaattaaccc gtgaaaatct gccaacattc gaatggctgc caatgacctg
     1981 cgcttatcgt ttgctggcgg aaggtaaaga tttacctgtg tggcatccgc tacttactgg
     2041 ttcgaaagcg gcaatgcatg gtgaacgtat ctctgtgcgt catatcgcag tgaaagaatc
     2101 agaagtgatt gactggcagg atcatatctt aaataaacct gactgggcgc agtgataaat
     2161 ttaatagatg ttgatggggg ctttcttaat atacgtctgg atgctcgcca tttcgtagcc
     2221 ctgtttttga aagcgctctg tcataatgag agttacccga taccttatta tcaacag
//
LOCUS       DAJVUK010000281         2268 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.285, whole genome shotgun sequence.
ACCESSION   DAJVUK010000281 DAJVUK010000000
VERSION     DAJVUK010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.285"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            671..2179
                     /gene="ltrA"
                     /locus_tag="OQQ57_004233"
     CDS             671..2179
                     /gene="ltrA"
                     /locus_tag="OQQ57_004233"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HCS1958750.1"
                     /translation="MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAH
                     TPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALR
                     DRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEG
                     DLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVI
                     SPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCR
                     YADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIR
                     KRSRYGEMRVISTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQF
                     VDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNH
                     GKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI"
BASE COUNT          576 a          561 c          669 g          462 t
ORIGIN      
        1 tgtgcccgga gttcagggcg ggcatggatg cttaaatgaa ccgcgagtct gtctggaata
       61 ttgaaccggt aactcacgat gagaaaccca acaatcccac cgggtgtgac ggtggagaac
      121 ctgagcggca gtgacctgcg gcatgcccgc agggtgatgt aacccgctga caacggggat
      181 tgaggcgaga tcactaagcc gagatgatcc tcaaggttaa gtactgaaag gctgaagaac
      241 atgaacccgt taatccgcct ctgtgggttg aaaacgtcac cacggcctac gtgatctgac
      301 aggccgtgca ggaggaactg gcagtgatac gtaagcactg ccggtcgaag gtgttttgac
      361 atgtatgcga aacaccgggg cagcagcgtc tatcacgctt gcgttgctga cttctgccaa
      421 cttgcggcaa gcaaggataa agagtgcgac gggcagcctc ctcagtatgc ctgagtccag
      481 gcaggtaaac cggggaaggt cagcgacgga tgttaagggg gcatggctcc gatgacgcgc
      541 tggctggcgg agcttccgta gtagtccgcg atggggaaag cccattacat ggcgaaggga
      601 agcagtttga atgtgtttgc gacgtgaatt aactgaccta acgaggtgaa gacctttgat
      661 aatcagcgaa atgcaacgca agcttgccac atgggcagcc accgatccgt ccctacggat
      721 tcaacggctg ctgcgtctga taacacaacc agaatggctg gctgaagcgg cgcggatcac
      781 gctttcatca aagggggcgc atacccccgg cgttgatggc gtgaacaaaa caatgctaca
      841 ggccagactg gctgttgagc tgcaaatcct cagggatgaa ttactctcag gccactacca
      901 gcccttgccc gccagacggg tttacatccc taaaagcaac ggcaaactgc gaccactggg
      961 tatccccgcg ttgcgggatc gtattgttca gcgggccatg ctgatggcga tggagccgat
     1021 atgggagagt gattttcata cgctctcata tggcttccgg cctgagcgca gtgtccacca
     1081 cgcgatccgc acggtgaaat tacagctcac agactgcggt gaaacccggg gacgctgggt
     1141 gattgaaggc gacctgtcca gttacttcga caccgtacat catcgactgc tgatgaaggc
     1201 tgtacgccgc aggatcagtg acgcacgttt catgactctg ctgtggaaaa ccatcaaggc
     1261 gggacatatc gatgtcggtc tctttcgggc ggccagtgaa ggtgtgccac agggcggtgt
     1321 tatatcgccg ctattatcga acatcatgct gaatgagttc gatcaatacc tgcatgagcg
     1381 ctacctgagc gggaaagcca gaaaagatcg gtggtactgg aataacagta tccaacgggg
     1441 ccgaagtacg gcggtcagag aaaactggca gtggaaaccc gcggtggcgt actgccgcta
     1501 tgccgatgat tttgtcctca tcgtcaaagg caccaaagca caggcggaag ccatcaggga
     1561 ggagtgtcgg ggtgtgctcg aaggcagtct gaaactcagg ctgaacatgg ataagactaa
     1621 aatcacccat gttaatgacg gctttatctt tctggggcac aggatcattc gcaaacgcag
     1681 tcgttatggc gagatgcgag tgatctcaac gatcccgcag gagaaagcca gaaacttcgc
     1741 cgcatcgctg acagcactgt tatcaggcaa ctacagtgaa agcaaagtcg atatggctga
     1801 acaactcaac cgaaaactga aaggctgggc catgttctat cagttcgttg attttaaggc
     1861 caaagtcttc agttatatcg accgtgtcgt gttctggaag ctggctcact ggctggcccg
     1921 caaataccgt acaggtatcg cttccctgat gaggtggtgg tgtaaatcac cgaaaccggg
     1981 tcagagcaaa acgtgggttt tatttggtaa aaccaatcac ggcaagctca gcggcgaaat
     2041 actgtaccgg ttggtggggc aaggcaagaa gctgttccgc tggcggctac ccgaaggtaa
     2101 tccctatctg aggacggaga ccagaaacac gtatacatcg cgctttacag aagtggcaat
     2161 ggcgttcgcc agcatttaaa tggagagccg gatgcgctga aaggtgcacg tccggttcgg
     2221 ggaggagagg cagggaaata gtccgactac gccctgcctc ttactcta
//
LOCUS       DAJVUK010000282         2250 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.286, whole genome shotgun sequence.
ACCESSION   DAJVUK010000282 DAJVUK010000000
VERSION     DAJVUK010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.286"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            111..432
                     /locus_tag="OQQ57_004234"
                     /pseudo
     CDS             111..432
                     /locus_tag="OQQ57_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(466..672)
                     /locus_tag="OQQ57_004235"
     CDS             complement(466..672)
                     /locus_tag="OQQ57_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001570270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958751.1"
                     /translation="MTVSYKITYEHRDGDQIRMEEVLFHSEHEPTKDEIHDAVRKDTV
                     RFNSPSNGVTAVSGFKVISVVPVP"
     gene            complement(1170..1243)
                     /locus_tag="OQQ57_004236"
     tRNA            complement(1170..1243)
                     /locus_tag="OQQ57_004236"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1209..1211),aa:Gly,seq:ccc)
     gene            complement(1322..2077)
                     /locus_tag="OQQ57_004237"
     CDS             complement(1322..2077)
                     /locus_tag="OQQ57_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HCS1958752.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKTGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
BASE COUNT          601 a          527 c          491 g          631 t
ORIGIN      
        1 tcatacacta aatcagtaag ttggcagcat taccaatttt gctaagttaa tgcattaatc
       61 taaaaacgct ttaaatcaat acataaccat tatctcttgg gattatttac atgcgcaaaa
      121 gtttaatgct gttacttgct tcaacattga ttatttctgg atgtgcaaca aaaaaacaac
      181 tcgttccaac tggtggaagc aaatcagacg gcacagttag gatgagttat tcttacggta
      241 tgtttgaaag tcctgttgta gatccacaac aaggcatgaa tgcagccaaa gcgcgttgtg
      301 ccgcttaggg gatattcagg agccgagcct tttggtggat tcacttctca atgttcacaa
      361 ccttcttcat ctggttgtat gcaaacactt gtgactatcg aatatcaatg cactggcgat
      421 attaagaagt aataattagg ggcttccagc cccttctata accattcatg gaacagggac
      481 aaccgaaatc actttaaacc ctgaaacagc cgttactcca ttagatggag aattaaatct
      541 cacagtatct tttcttactg catcatgaat ttcatctttt gttggttcat gctctgaatg
      601 gaataaaacc tcttccattc taatttgatc accgtctcta tgctcataag taatcttgta
      661 gctaacagtc atatcaacct catgcagggg aattgtgaga ttattataga caatagaaac
      721 cataaagccc cgttggtgat acagcaacaa gcgggagcgt agcgacttca tcagattgtc
      781 agaaagatca caccttatca ggataaccgt gtacccgttg ggagcgtggc tgaaacgctg
      841 atagagcttg catatggttt gcaaggacca atatcaccat aaacctgttt acgcagccac
      901 aaggccgcac atcgggctta aatgcgtgtg ttcagtctgt cgatgacatt acaatgccag
      961 gatgggcttt atcttcacgt tgtgctatcg cggtgtgaga ggtgcaactg ccgccaacgt
     1021 taggttatac tgtcatctca ccgtgtaact taacgtgaca gttactaagg gcggatcaca
     1081 atggtagaac tcctaagcaa attaaatagg taactgttta agttgctgac agagaagact
     1141 tttttagtct tctccacctg gggagattct ggagcgggcg aagggaatcg aaccctcgta
     1201 tagagcttgg gaagctctcg ttctaccatt gaactacgcc cgcttcgaga tgcgtaaggc
     1261 attataaacc ttacgctctc cttagcaagt gccgcgctgc tgactgctga ttaattcgcc
     1321 atcagcattt tggcttgctg ccctgcggcg gcaagtaacg tagcggatca attgccgttg
     1381 cacggtaacg aatctggaaa tgcaggcgaa cagatgccgc atccgtgctc cccatagtgg
     1441 cgattttttg cccagtcttc acgctttgcc cattatttac cagcatcgtg tcattatggg
     1501 cgtaagccgt aatgtaatct tcactgtgtt taatcatgat gagattaccg tagccacgca
     1561 gctggttgcc cacatacacc acctttcctg cacccgcggc gtaaataggt gtaccccgtg
     1621 gagctgagat atcaatccct ttattgccgc catctgctgt cgaatacggc atgataactt
     1681 tccctgtcgt tggccataac caacaacgtt gccctactgg cggccaggaa gatttcggta
     1741 ccgctgatga cggtgtaacc gatgcggttt tggtcgttga tttggcggtt gatttacgtg
     1801 tactactgct acttttcgcc ccacccagtt ttagtttctg accaacttca atggtgtaag
     1861 ggggggaaat gccgttcagt cgcgccagtt cttttacgct ggttcccgtg gtgcgcgaaa
     1921 tacgatatag cgtatccccc cgtttcacgg tgtaaacgga gccggaatat gttcctgtat
     1981 cggatgattt gctacccgaa cagcccgcca aaagcagtcc aaccgataac aacatcacga
     2041 tacccagaga ttttttattc aggcgtcccg cactcaaaat ctttcctcgc ttaaaaaaca
     2101 agacgcctta tcatagcagc cagcctcttg atacccaatc tcttgcttct ggaaaaacgt
     2161 ggtaatagag aaagaggtta atttcatttg gcaaagggaa gtatcatcag caaaatattc
     2221 gctgtagagg tatcgaactt cctgactttt
//
LOCUS       DAJVUK010000283         2242 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.287, whole genome shotgun sequence.
ACCESSION   DAJVUK010000283 DAJVUK010000000
VERSION     DAJVUK010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.287"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            12..>2242
                     /gene="ppsA"
                     /locus_tag="OQQ57_004238"
     CDS             12..>2242
                     /gene="ppsA"
                     /locus_tag="OQQ57_004238"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005022409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HCS1958753.1"
                     /translation="MLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTA
                     DAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREA
                     YAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFN
                     GRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGL
                     GEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVP
                     QEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSR
                     GQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDW
                     EPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDT
                     GYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIIN
                     RMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRV
                     IVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFALECEAVKRVR
                     NDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQF
                     LEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRAAKKQGKYVG
                     ICG"
BASE COUNT          500 a          578 c          659 g          505 t
ORIGIN      
        1 cgtcaccgct ggtgctttgg tacaaccaac tcggcatgaa tgatgtagac agggttgggg
       61 gcaaaaatgc ctccctgggt gaaatgatta ctaacctttc cggaatgggc gtttccgttc
      121 cgaatggttt cgccacaacc gccgacgcgt ttaaccagtt tctggaccaa agcggcgtaa
      181 accagcgcat ttatgaactg ctggataaaa cggatattga cgatgttact cagcttgcga
      241 aagcgggcgc gcaaatccgc cagtggatta tcgacactcc cttccagcct gagctggaaa
      301 acgccatccg cgaagcctat gctcagcttt ccgccgatga cgaaaacgcc tcttttgcgg
      361 tgcgctcctc cgccaccgca gaagatatgc cggacgcttc ctttgccggt cagcaggaaa
      421 ccttcctcaa cgttcagggg tttgacgccg ttctcgtggc agtgaaacat gtatttgctt
      481 ctctgtttaa cggtcgcgcc atctcttatc gtgtgcacca gggttacgat caccgtggcg
      541 tggcgctctc cgccggtgtt cagcggatgg tgcgctccga cctcgcatct tctggcgtga
      601 tgttctccat tgataccgaa tccggctttg accaggtggt gtttatcact tccgcatggg
      661 gccttggtga gatggtcgtg cagggggcgg ttaacccgga tgagttttac gtgcataaac
      721 cgacactggc ggcgaatcgc ccggctatcg tgcgccgcac catggggtcg aaaaaaatcc
      781 gcatggttta cgcgccgacc caggagcacg gcaagcaggt taaaatcgaa gacgtaccgc
      841 aggaacagcg tgacatcttc tcgctgacca acgaagaagt gcaggaactg gcaaaacagg
      901 ccgtacaaat tgagaaacac tacggtcgcc cgatggatat tgagtgggcg aaagatggcc
      961 acaccggcaa actgttcatt gtgcaggcgc gtccggaaac cgtgcgctca cgcggtcagg
     1021 tcatggagcg ttatacgctg cattcacagg gtaagattat cgccgaaggc cgtgctatcg
     1081 gtcatcgcat cggtgcgggt ccggtgaaag tcatccatga catcagcgaa atgaaccgca
     1141 tcgaacctgg tgacgtgctg gtcactgaca tgaccgaccc ggactgggaa ccgatcatga
     1201 agaaagcatc tgccatagtc accaaccgtg gcggtcgtac ctgtcacgcg gcgatcatcg
     1261 ctcgtgaact gggtattccg gcggtcgtgg gctgtggtga tgcaacagaa cggatgaaag
     1321 acggtgagaa cgtcactgtt tcttgtgccg aaggtgatac cggttacgtc tatgcggagt
     1381 tgctggaatt tagcgtgaaa agctccagcg tagaaaccat gccggatctg ccgttgaaag
     1441 tgatgatgaa cgtcggtaac ccggatcgag ctttcgactt cgcctgtctg ccgaacgaag
     1501 gcgtgggact tgcgcgtctg gaatttatca tcaaccgtat gattggcgtc cacccacgcg
     1561 cactgcttga gtttgacgat caggaaccgc agttgcaaaa cgaaatccgc gagatgatga
     1621 aaggttttga ttctccgcgt gaattttacg ttggtcgtct gactgaaggg atcgcgacgc
     1681 tgggtgccgc gttttatccg aagcgcgtca ttgtccgtct ctctgatttt aaatcgaacg
     1741 aatatgccaa cctggtcggt ggtgagcgtt acgagccaga tgaagagaac ccgatgctcg
     1801 gcttccgtgg cgcgggccgc tatgtttccg acagcttccg cgactgcttc gcgctggagt
     1861 gtgaagcagt gaaacgtgtg cgcaacgaca tggggctgac caacgttgag atcatgatcc
     1921 cgttcgtgcg taccgtagac caggcgaaag cggtggttga agaactggcg cgtcaggggc
     1981 tgaagcgtgg tgagaacggg ctgaaaatca tcatgatgtg tgaaatcccg tccaacgcct
     2041 tgctggccga gcagttcctc gaatatttcg acggcttctc aattggctca aacgacatga
     2101 cgcagttggc gctcggtctg gatcgtgact ccggcgtggt gtctgaactg ttcgatgagc
     2161 gcaacgatgc ggtgaaagca ttgctgtcga tggctatccg tgccgcgaag aaacagggca
     2221 aatatgtcgg gatttgcggt ca
//
LOCUS       DAJVUK010000284         2233 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.288, whole genome shotgun sequence.
ACCESSION   DAJVUK010000284 DAJVUK010000000
VERSION     DAJVUK010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.288"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..136
                     /locus_tag="OQQ57_004239"
     CDS             <1..136
                     /locus_tag="OQQ57_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HCS1958754.1"
                     /translation="WQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLAKV
                     "
     gene            complement(156..407)
                     /locus_tag="OQQ57_004240"
     CDS             complement(156..407)
                     /locus_tag="OQQ57_004240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958755.1"
                     /translation="MPGTTTAMSINFIGITARTMNSNGSHGKPQIPVDYQKLLSIEDI
                     TFCRNRWGNIGENALRRVAVGKKLSFFGSDRGGENAAII"
     gene            330..1019
                     /locus_tag="OQQ57_004241"
                     /pseudo
     CDS             330..1019
                     /locus_tag="OQQ57_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(1036..1215)
                     /locus_tag="OQQ57_004242"
                     /pseudo
     CDS             complement(1036..1215)
                     /locus_tag="OQQ57_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1545..>2233
                     /gene="ipaH7.8"
                     /locus_tag="OQQ57_004243"
     CDS             1545..>2233
                     /gene="ipaH7.8"
                     /locus_tag="OQQ57_004243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH7.8"
                     /protein_id="HCS1958756.1"
                     /translation="MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEER
                     GIAFNRLSQCFQNQEAVLNLSDLNLTSLPELPKHISALIVENNKLTSLPKLPAFLKEL
                     NADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLK
                     FLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHFNQITTLPE
                     SFSQLDSSYRI"
BASE COUNT          666 a          502 c          417 g          648 t
ORIGIN      
        1 atggcaggca cttcacgaca caataacgcg taatcatcag tgccgctcaa tgtggcaact
       61 gttgaaaaaa gttcgccatt ttatggaaac cgtcagccca ttccccggag gcaaacatgg
      121 gctggcaaaa gtgtagcggt attaagcgca gctatttaga ttattgccgc attttctcca
      181 ccacgatcag agccgaaaaa agataatttt tttccaactg ccacccggcg taatgcgttt
      241 tcaccaatgt taccccacct attgcggcaa aaggtaatgt cttcaatcga tagaagtttc
      301 tggtaatcta ctggtatttg aggttttcca tgactaccgt tactgttcat tgtccgcgct
      361 gtaattccga tgaagtttat cgacatggcc gtagttgttc ccggcatgag cgtttccgtt
      421 gtcgctcatg taaacgtgtt ttccagctca cttactctta tgaagccaga aaactcggcg
      481 ttaaggagca gatcgttgaa atggcacata acggcgcagg gggctgttat accgccagaa
      541 cactgaaaat cggcatcaat accgtcatac ggacattaaa aagctctcgc cccggcggat
      601 aacatctgcg ccagtcgctc acgctgatgt tgcccttatc tgtgaacttg atgagcagtg
      661 gcgcttcgtt ggcagcaagg cgcaacaaca ctggccctgg tatgcgtaca acactaaaac
      721 tggggtgtgt tggcttacac ttgcgggcca cggaatgatg agacctgtcg ggaactgtta
      781 gccctgttga ctccgttctg tatcggcatg gtgaccagcg atgactgggg cagctacgcc
      841 agagaagtgc cggaggagaa acacctgacc ggcaaaatct tcacgcaacg tatgaacgta
      901 acaacctgac cctccgcccc cgcatcaagc ggctggcacg taaaacaatc tgcttctcgc
      961 gttccgtgga aatccacgaa aaagtcatcg gttccttcat tgaaaagcac atattctaat
     1021 gattggaagt actacccggc aaaactcatt cagtgcattc cagtgattca ggatatagtt
     1081 gaacgccttt accatttcag catggtttga caaagttttc ctctggagct ttatccagtc
     1141 atacaaggac ttcattcgcg gcacacattt ctcctgcctt accgcaagcc gtttttctgc
     1201 cggcctccct cgtattaaat gtgtatcgtt tttttacagt aattttaatt tatcattcta
     1261 taataggaat aaatgagctt ggctaaaata tgatataaaa caaatatact tactcggatt
     1321 acatttcctt gctcactgga atgttgaatt cagtgttatt attgactgca gtcacaataa
     1381 aaaaaagaat tccatagaaa acctcaacaa ataaattaca actaacttct gttatgtgta
     1441 aaatggaaac tattaaaact taatatcgaa aatggtaagt gaaatttgta taaatataca
     1501 attttaaata tttattctca caaatataag gttgccctag cattatgttc tctgtaaata
     1561 atacacactc atcagtttct tgctccccct ctattaactc aaactcaacc agtaatgaac
     1621 attatctgag aatcctgact gaatgggaaa agaactcttc tcccggggaa gagcgaggca
     1681 ttgcttttaa cagactctcc cagtgctttc agaatcaaga agcagtatta aatttatcag
     1741 acctaaattt gacgtctctt cccgaattac caaagcatat ttctgctttg attgtagaaa
     1801 ataataaatt aacatcattg ccaaagctgc ctgcatttct caaagaactt aatgctgata
     1861 ataacaggct ttctgtgata ccagaacttc ctgagtcatt aacaacttta agtgttcgtt
     1921 ctaatcaact ggaaaacctt cctgttttgc caaaccattt aacatcatta tttgttgaaa
     1981 ataacaggct atataattta ccggctcttc ccgaaaaatt gaaattttta catgtttatt
     2041 ataacaggct gacaacatta cccgacttac cggataaact ggaaattctc tgtgctcagc
     2101 gcaataatct ggttactttt cctcaatttt ctgatagaaa caatatcaga caaaaggaat
     2161 attattttca ttttaatcag ataaccactc ttccggagag tttttcacaa ttagattcaa
     2221 gttacaggat taa
//
LOCUS       DAJVUK010000285         2207 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.289, whole genome shotgun sequence.
ACCESSION   DAJVUK010000285 DAJVUK010000000
VERSION     DAJVUK010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.289"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(117..1571)
                     /gene="ospC2"
                     /locus_tag="OQQ57_004244"
     CDS             complement(117..1571)
                     /gene="ospC2"
                     /locus_tag="OQQ57_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC2"
                     /protein_id="HCS1958757.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSS
                     SGISEKHLDHCADTVKSFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFNFRHQSNANLSNNTLNIKSFD
                     KIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIRLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSK
                     FNFTKQDIAEMEKMNNNMYCELYDVEYLLSEDSANYKVLEYFINNGLVDVNKRFQKAN
                     SGDTMLDNAMKSKDSKTIDFLLRNGAVSGKRFGR"
     gene            1996..>2207
                     /locus_tag="OQQ57_004245"
     CDS             1996..>2207
                     /locus_tag="OQQ57_004245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958758.1"
                     /translation="MARYDLPDEAWTIIKPLLPPEPTTPRAGRPWAEHRKIINGMFWV
                     LCSGAPWRDLPERYGAWKTVYNRFNR"
BASE COUNT          685 a          405 c          365 g          752 t
ORIGIN      
        1 cgttcaccac atgcaatgtg ttgttgcagg ggaacggtct gcaccatccc ctatatcgat
       61 caatataaca aaaatgacaa cgtcagattc agggcacaac ctaaatatat tttaggtcac
      121 ctcccaaatc gtttacctga taccgctcca tttcttaata aaaaatcaat tgtttttgaa
      181 tctttgcttt tcattgcatt gtcaagcata gtgtccccac tatttgcttt ttgaaatctt
      241 ttgtttacat caaccaatcc attattaata aaatattcta gcactttata gttggcacta
      301 tcttcactaa gtaaatactc aacatcatac agctcacaat acatattgtt gttcattttc
      361 tccatctctg cgatatcttg ttttgtaaaa ttaaatttag atagtaaata aagtgccata
      421 tcagattttg cattgcctag agaataagca agagcttgat gagccatttt tttatcagtc
      481 accttattgt taatttcttc ataattggat gctttaatgg catcctccaa agatatatct
      541 ctgagtctta tctttttgaa gttatctgtg cttagcattc ttggtatatg atactcaagc
      601 tgaaacacaa agtttataat tctatccaga ctaacaggat caatgttttt attataacaa
      661 aactctcgga atctttgatc tttactcttt cttataaaat caataagatg caacccaatt
      721 ccaagcctca tatctttagt attaaatatt ggcacatcag tttttccctg attaccatgc
      781 acatacctgc taacttcatc cacaacctct ttaaagttat ctaagaaaaa tgattggtgc
      841 tcatggtaaa aaacaggtgg aatagcatta tcaaagtggt cggttaatgt catatatcca
      901 tatggagagt catgatcaat gatatacgca ttagcaccaa aatccacagt atgatgtgtt
      961 ttatttagtg ggagtgtttc ttgatgattg gaaatttcaa ccccaaaaaa aacaaaatcg
     1021 tggttagcta tttcttcaat atcctcagag aatgtgtttt tatatgtttg tatattctca
     1081 gacttaattt tatcaaagga cttaatatta agagtattat ttgacaggtt agcgttactt
     1141 tgatgtctga agttaaaatc agaattaata ataatagaga gcaagtgacg ttcatccgaa
     1201 gaaagaggat gagttttttg tattatttca gaaagatagt gtctggacac cttatcgagg
     1261 tgctcaagtg accgaaatga tgaccgtgct ccagatggcg cttcaataga aagatttaat
     1321 gatttgaaac tggtcccttg agagaacatt ttactataac tttgcgctgc tatagacttc
     1381 cttaaaaagc ttttcacagt atcagcacag tgatctaaat gtttttcact tatgccagaa
     1441 gaggatgagt ttgttacgca tgatatgttt ttttgtaatg cttttgtatc tttgttcgga
     1501 tttatttttc catcaacaag atcaatattg ttctgaacat taatatgatt tactgcttca
     1561 ggtattttca taaaacatcc cccattatgt gcgtttttat ctgcagttat ttagaataat
     1621 attatctaac ttaatatttt cttgtatgta ttataacgaa catattttaa tatgttgtac
     1681 gattttcact ctgaaatccc ctgagtttaa tcacacttcc tttactgaaa ggaattattg
     1741 caacagtatt atttgttttt ggatatatat cttgcgcctt gttatgtagt taatgctcag
     1801 aatatgatag ataaaataga gacgcagaac agggcatgct cataacatga tgataacata
     1861 aaaaattagt aacaataaat gaaagaatca tgggcgctca acaaaaagag agctaaatag
     1921 ctgcgcggaa tagtaggctg tgtcccttaa tcatctgagt tatagtaact gtctgtttac
     1981 acaacatatt gaactatggc tcgctacgac cttcccgatg aggcatggac catcatcaag
     2041 cccctgttac ctcctgaacc caccacacca cgggccggac gcccatgggc tgagcaccgt
     2101 aaaatcatca atggcatgtt ctgggtgtta tgttccggtg caccatggcg cgatttaccc
     2161 gaacgatatg gggcatggaa aactgtttat aaccgcttta accgatg
//
LOCUS       DAJVUK010000286         2175 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.290, whole genome shotgun sequence.
ACCESSION   DAJVUK010000286 DAJVUK010000000
VERSION     DAJVUK010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.290"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            376..519
                     /locus_tag="OQQ57_004246"
                     /pseudo
     CDS             376..519
                     /locus_tag="OQQ57_004246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558263.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            666..934
                     /locus_tag="OQQ57_004247"
                     /pseudo
     CDS             666..934
                     /locus_tag="OQQ57_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1327..>2175
                     /locus_tag="OQQ57_004248"
     CDS             1327..>2175
                     /locus_tag="OQQ57_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858398.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1958759.1"
                     /translation="MIKSTNIQAIGSGIMHQINNIYSLTPFPLPMELTPSCNEFYLKA
                     WSEWEKNGTPGEQRNIAFNRLKICLQNQEAELNLSELDLKTLPDLPPQITTLEIRKNL
                     LTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGDNKIKELPFLPENLTHLRVHN
                     NRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLAMANNFIEQLPELPFSMNRAVL
                     MNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPRIFFSMGNSA
                     TISAPEH"
BASE COUNT          728 a          463 c          364 g          620 t
ORIGIN      
        1 gcttcttacc atatttgaaa taaagctcaa tagcgcaaat tttttgttct tcagtaaaca
       61 tgtttcatct tctgagagtc caggaaatcg tccgcatccc cattaccgtc ttatatcact
      121 ggcgctgaca tgtgctcatt gatgaagtga atctgaatga catgttttgc catatcaacg
      181 ccaaccggtg tatatttcat ttgtggagtc tccagtctga ggacgcttta tgcatcccgt
      241 attgggcagt atgatgccgg aaagctgcga ggctccacac ctgccagttt caccctttta
      301 accatcatac tactccgtgt ttaattgtgt gggatgcgtt cattacattt taacagtgtc
      361 accccgtcgg ccacgaaaga taaacaggtg accagaaaag ggatcttcat ccagcacatg
      421 ctatatcttg aacgtaacaa cctgaccctc cgcacccgca tcaagcggct ggcacgtaaa
      481 acaatctgct tctcgcgttc cgtggaaatc cacgaaaagt catcggctcc ttcattgaaa
      541 aacacatatt ctactgattg gaagcgccac ccgaaaaagt atcgtttttt tacagtaaac
      601 ttcatttagc cgactataat gtaaaaaaat aaatttttta ccgaaatata acataaggaa
      661 gtaatatgct tacacaaact atattccctt gtcttcccaa aaaacaagaa aatatcatcc
      721 ctgaagtatc aaatactata ttagtatctt ctactgttac tacagatgga tgtactgttt
      781 ttaataaaca aaaacagcca tatacgaatt gcaaatacct gctaccaacc gaacgaaaaa
      841 gttgaaattc acagctacag aaatacaatg gttgacaaag ataaatgaag ccggaattaa
      901 tgaaaaacaa agccaacggt attctgattt ctgaagttaa tttcagactc gtttaagctc
      961 cattttcaaa aaaaatatat cagggtttgt tactaataac ttctgaaaac agaaaaaaaa
     1021 atagagcagt aattctattt cagagaggag taactccatc tatcctcgat acgtactgaa
     1081 cgttatcgtg atatattcat catgctttct tcaccattat tcgagtacag ggagagacgc
     1141 aatgacctta aatacctttt tatggctgaa ttaccattct caggaataac agcagactcc
     1201 ttcccataga cggcttaggg ggaaagcaat acccggagaa agggtacaaa gcaaactgtt
     1261 ttaaaattaa taagctatat tctatttcac tagaattctt atcgctgata agaaatttta
     1321 gttataatga ttaaatcaac caatatacag gcaatcggtt ctggtattat gcatcaaata
     1381 aacaatatat actcgttaac tccatttcct ttacctatgg aactgactcc atcttgtaat
     1441 gaattttatt taaaagcctg gagtgaatgg gaaaagaacg gtaccccagg cgagcaacgc
     1501 aatatcgcct tcaataggct gaaaatatgt ttacaaaatc aagaggcaga attaaattta
     1561 tctgagttag atttaaaaac attaccagat ttaccgcctc agataacaac actggaaata
     1621 agaaaaaacc tattaacaca tctccctgat ttaccaccaa tgcttaaggt aatacatgct
     1681 caatttaatc aactggaaag tttacctgcc ttacccgaga cgttagaaga gcttaatgcg
     1741 ggtgataaca agataaaaga attaccattt cttcctgaaa atctaactca tttacgggtt
     1801 cataataacc gattgcatat tctgccacta ttgccaccgg aactaaaatt actggtagtt
     1861 tctggaaaca gattagacag cattcccccc tttccagata agcttgaagg gctggctatg
     1921 gctaataatt ttatagaaca actaccggaa ttacctttta gtatgaacag ggctgtgcta
     1981 atgaataata atctgacaac acttccggaa agtgtcctga gattagctca gaatgccttc
     2041 gtaaatgttg caggtaatcc actgtctggc cataccatgc gtacactaca acaaataacc
     2101 accggaccag attattctgg tcctcgaata tttttctcta tgggaaattc tgccacaatt
     2161 tccgctccag aacac
//
LOCUS       DAJVUK010000287         1949 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.292, whole genome shotgun sequence.
ACCESSION   DAJVUK010000287 DAJVUK010000000
VERSION     DAJVUK010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.292"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(24..>1949)
                     /gene="pdeF"
                     /locus_tag="OQQ57_004249"
     CDS             complement(24..>1949)
                     /gene="pdeF"
                     /locus_tag="OQQ57_004249"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
                     /protein_id="HCS1958760.1"
                     /translation="FIIIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPA
                     TLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVR
                     NPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSL
                     LLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSF
                     IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGME
                     MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDS
                     HLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRR
                     GAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELI
                     SPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPF
                     EVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASY
                     ARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMRVVAEYVENEEIREA
                     VLSLGIDYMQGYLIGKP"
BASE COUNT          572 a          470 c          439 g          468 t
ORIGIN      
        1 tcattcaacg tatcaattaa cggctacggc ttaccaataa gataaccctg catataatcg
       61 atccccaaag agagcaccgc ctcgcggatc tcttcgtttt caacgtactc tgccactacc
      121 cgcattttct tcattcgcgc caggtggcaa atcgatgcca ctatctgata atctagacta
      181 tttgacacaa tattgcggat aaaactgccg tcaattttaa gcagatcggc attcacattt
      241 ttaagccgtg catagctggc gtagccggtg ccgaaatcat caatcgcaat ctggcagcct
      301 aattcctgaa gatgctgcaa ggtgatttgc gcctgcttaa cattggtcag agcattactt
      361 tcggtgactt caaaaataag ttgccacgct tcaatctgat atttagccag caactgactg
      421 acttcaaaag gaaaacgagc ctgacatacc gaggttggag acagattaat agcaaaacgg
      481 tgagcgggca tcttcgctct gttttcagcc ataaattgca gcgtatgctc aatgacccac
      541 atgtcgatac tcgacgataa accaaattcg tgcgcgaccg gcaagaagct atcggggctg
      601 atcagttcat cattctcacc tttcatgcgc agaagaattt catggtaaac atcaccacgc
      661 ataccggtaa tcggctgggc catcaggaaa aaatggttgt gttccagcgc ctgctgtagt
      721 cgattcatca tcgcgacttt atctttcaat tcgcgttgca aatacattgc cccgcgacgc
      781 tgcatatttt ccggggcgtt ggtcacgatg gaaagttcgg cgaccgtatt tagctctccc
      841 agcagcaggt agatatgatt cactggcgag cgcacatagc agtaactgac gccaatctgc
      901 ggttgcatcg gcatgccatc ccaaaagaaa cgaaattgct tgagatggct atccagtgcg
      961 gtaatgcgct cctggtgcga ttctgtattc agtcgcagcg cgagatcgtt acccgaaagc
     1021 tgataaacat cttcacccgg ttccagcaag ggtgacagcc agtgagaaag tttttgcttg
     1081 tattgaatcc gcagcatgat gccatagttc ttaaccagca tttccatgcc agggatgcgt
     1141 aaataacaaa gcgcagacca gggggcatca cgcaacgcgc gattcagggc gcgaacattt
     1201 ggcagatgaa ccaccgggtc cacatacgca agccgctgaa tgcgtctgac taccgctctc
     1261 tgacgggttg ccagtacagc catataattg acaataaaag agaataccag ataactggag
     1321 gaggttatgg tcagctgcgt ggtatagcca ggataaatgg gaatgtaatt ttgatagctg
     1381 tggatgctga tcatcaacac gaccgcccag agcagagaaa tcagcttata accatagcgc
     1441 atcgctcccc acatcatcag gggcagcaat aatgacaagg tataattggt gctaaaaatt
     1501 gtgctttttt catttaacgg catgcataac agcaacaata aagcacctaa tgccagtagc
     1561 cagagcgcga actctttttt ggtgactttg gcatcaacct gctgttttaa ttgcgaataa
     1621 tagctacgta aataaaatgg atttcgcact acccgaatga tgaagtagca cagcgggaca
     1681 ccgatcagat tacccaccag taaggcctga taattgatta aagtcccgag gttaaaaggc
     1741 atgacaccga ccagattttc tctgctcgcc aataatccta caaatgcagc aaactggaaa
     1801 agtatcagaa acagcgttgc aggaaacaca atctgccaga atatacgctg ggaaattaaa
     1861 cgggtatcac catgtgaaac gttgttacgc cggggagtaa agaccctgta accgccccaa
     1921 cagagaatga taatgataat gataataaa
//
LOCUS       DAJVUK010000288         1817 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.293, whole genome shotgun sequence.
ACCESSION   DAJVUK010000288 DAJVUK010000000
VERSION     DAJVUK010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.293"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            281..1123
                     /locus_tag="OQQ57_004250"
     CDS             281..1123
                     /locus_tag="OQQ57_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCS1958761.1"
                     /translation="MLNGGGILFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLNEFNLKAHIFLIT
                     SFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKLTSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELG
                     FHYLYTTERRMNAPAKGTTRIGRISTKERENCVWLKRRLFYYTTPFFSSLLALHKGPR
                     LPDD"
     gene            1126..>1817
                     /gene="capU"
                     /locus_tag="OQQ57_004251"
     CDS             1126..>1817
                     /gene="capU"
                     /locus_tag="OQQ57_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HCS1958762.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKFGIDITFALFRNSLHIPTVWRLLGIVHSFQPDAIVCHSGHDSNIVGLVRFFTW
                     KHPFRIIRQKTYLTRKTKFFSINHFCDEVIVPGTNMKTHLEQEGCRTRVTVVPPGFDF
                     QELYVDSRNSLPPSVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELR"
BASE COUNT          534 a          321 c          398 g          564 t
ORIGIN      
        1 ttctggtcaa caaccagttg agcggattcg cgtttaaact ctgcgctgaa atttcttttt
       61 tcattatggc acctgtgttg ttctgaggtg agcatatcac ctctgttcag gtagctaaat
      121 ttagtgtgcc acctcaaggt tcttagtgag ccgtttttaa aagatatgat aatatattat
      181 tgtttataaa ttgttgatgt ttgatttagt agtatataaa gttcaccaac tttattaggc
      241 tttcctttta tctctactta ctgggtgcca gaaactttaa attttaaacg gagggggcat
      301 tttgtttaaa gcaaatcatg ttccggtatt aatgtatcat catgtcagcc attgcccagg
      361 actggttaca ctttctcccg agacattccg gaaacaaatg aaatggttgg ctgaaaacaa
      421 ctggaaaaca ctgtcatcag atgaactgga gtttttttat cggggcggaa aacttccccg
      481 taaaagcgtt atgttgacat ttgatgatgg ataccttgac aactggtttc aggtatatcc
      541 tttattaaac gagtttaatc tcaaggcaca tattttttta attaccagtt ttattggaaa
      601 tggtccggtt cgtcactctc ctggaaagga atattctcat cgcgattgcg aacatcaaat
      661 agcaaccggg aatgctgata atgttatgct tcgctggtct gaagtgaacg aaatgttgca
      721 atctggtctg gtcgaatttc atgttcatac acatactcat acacgttggg ataaaaagct
      781 cacttcacga gaagaacagt gtaaacatct tcggcaggac ttattgagcg ggagagaata
      841 tttaaaaaaa atgacaggaa aatgcagtaa acatttgtgt tggccggaag gttattataa
      901 caaggattat attcagatcg ctgaagaact tggattccat tatttatata caacagaaag
      961 aagaatgaat gctcctgcta aaggaactac acggatagga agaataagca ccaaggaacg
     1021 ggaaaattgc gtatggctga aaagacgact tttttattat acaacaccgt ttttttcatc
     1081 gttgctggcc cttcataagg ggccaagatt accggatgac taataatgaa tatactattt
     1141 acggaatcat caccgaatat aggtggtcag gaattacagg ctgttgctca aatgaaggcc
     1201 ctgaagaaaa tggggcattc agttctgctt gtctgcaggg agaacagcaa aattgctttt
     1261 gaagccagta agtttggaat tgatatcaca ttcgcgttat ttcgaaacag tcttcacatt
     1321 cctactgtat ggagattact cggaatagtt catagttttc agcccgatgc aatcgtttgt
     1381 cacagtggac atgatagtaa tattgttggt ttggtacggt tttttacctg gaaacatcca
     1441 ttcagaatta tcaggcaaaa gacatatttg acacgaaaaa caaaattttt ttcaataaat
     1501 catttttgcg atgaggtgat tgttcccgga acaaatatga agacacatct ggagcaggaa
     1561 ggatgtcgaa ctcgggttac tgttgtgcct cctggctttg atttccagga attatacgtt
     1621 gattcccgaa acagtttgcc tccgagtgtt ctttcctggc tggcatcccg aagaggatgc
     1681 cccgtaattg ctcaggtagg aatgttgcgc ccggaaaaag ggcacgaatt tatgttgaat
     1741 ttactgttcc atttaaaaat gaatggacga cagttctgtt ggttgattgt ggggtctggt
     1801 tcacctgaac tgcggga
//
LOCUS       DAJVUK010000289         1737 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.294, whole genome shotgun sequence.
ACCESSION   DAJVUK010000289 DAJVUK010000000
VERSION     DAJVUK010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.294"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            68..808
                     /locus_tag="OQQ57_004252"
     CDS             68..808
                     /locus_tag="OQQ57_004252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HCS1958763.1"
                     /translation="MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN
                     VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST
                     SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL
                     ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVTG
                     LNGKASSAKVHFYAINDFGGTIEGNASL"
     gene            843..1737
                     /locus_tag="OQQ57_004253"
                     /pseudo
     CDS             843..1737
                     /locus_tag="OQQ57_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
BASE COUNT          502 a          367 c          370 g          498 t
ORIGIN      
        1 gaatagtgtt aataatttct atttttatat tattccctgt tttaattaac tctgtcaggg
       61 atggtttatg ttttttaaca ccaaacatac aacagcttta tgcttcgtaa cctgtatggc
      121 ttttagttca tcgtctattg cggacattgt catttcgggt actcgcgtaa tatataaaag
      181 cgatcaaaaa agtgtcaacg tacgtctgga aaataaaggg aataacccgt tgcttgtcca
      241 gagttggtta gatactggcg atgacaacgc tgagcctggc agtattacag tcccttttac
      301 tgccacgccg ccagtatcgc gtattgatgc caaacgtggg caaacaatca aattaatgta
      361 cacagccagc acctcactgc ctaaagacag agagagcgtg ttctggttta acgtactgga
      421 agttccacca aaaccagatg cagaaaaggt cgcgaatcaa agtctgctgc aactggcatt
      481 tcgcacacgt ataaaacttt tctatcgccc ggatggattg aagggaaatc cctctgaagc
      541 cccgttagcc ctgaagtggt tctggtcagg ttcagaaggt aaggcgtcat tgcgagtgac
      601 caatccaacc ccttactacg tctcttttag cagtggtgat ttagaagcta gcggtaaacg
      661 ctatccgatt gatgtgaaaa tgattgcacc atttagtgat gaggtcatga aagtcactgg
      721 ccttaatggc aaagcaagtt ctgcaaaagt acatttttac gccattaatg attttggtgg
      781 caccattgaa ggtaatgcca gtctgtaatc aggcaaggat ataattccgc aggaagcata
      841 acgtgactat aaaaccaact aaaaattatc ataatcatct gacccgtatc gctacgtttt
      901 gcgcgctgct gtattgcaat agtgctttct gtgctgaact tgttgaatat gaccatacct
      961 tcctgatggg gcagaatgcc tcaaatattg atctcagccg gtatagtgaa ggtaaccctg
     1021 ctataccggg tatgtacgac gtcagtgttt atgtcaacga tcaacctatt attaaccaaa
     1081 gcattacatt tattgaaatt gaaggaaaaa aaacgcacaa gcctgtatca cacttaagaa
     1141 tttattgcag tttcatataa attctcccga tataaataac gaaaaagccg ttctgcttgc
     1201 cagggatgaa acactcggca attgccttaa tttgacggaa attattcctc aggcttctgt
     1261 tcgttatgac gttaacgagc aacgtctgga tatagacgtt cctcaggcat gggtaatgaa
     1321 aaattaccaa aactatgttg atccatcgtt atgggaaaat ggcattaatg cggccatgtt
     1381 gtcatacaac ctcaacggat atcatagtga aactcctggt cgaagaaatg acagcattta
     1441 tgctgctttt aacggtggga tgaatttagg tgcatggcga ctgcgtgcct caggcaacta
     1501 caactggatg accgattctg gcagtaatta tgattttaag aatcggtata tacagcgtga
     1561 tatcgcctcg ctgcgttctc aactcattct tggtgagtct tatacaacgg gcgaaacctt
     1621 tgattctgtc agtatccgcg gcattcgttt atacagcgac agccgcatgt tgcctccgac
     1681 attagcgagt tttgcgccta tcattcatgg cgttgctaat accaacgcca aagtcac
//
LOCUS       DAJVUK010000290         1704 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.295, whole genome shotgun sequence.
ACCESSION   DAJVUK010000290 DAJVUK010000000
VERSION     DAJVUK010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.295"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(76..1691)
                     /locus_tag="OQQ57_004254"
                     /pseudo
     CDS             complement(76..1691)
                     /locus_tag="OQQ57_004254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001441428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
BASE COUNT          438 a          436 c          369 g          461 t
ORIGIN      
        1 ttctgttcgc catgatgcgc gacgggactt tttatacccc gcaggggtca taacatgctt
       61 gacaacttaa taggggcccc cccacaaaaa ggcaaacaga tccgaagcgg gataatcttt
      121 ttggggagaa ttgttccagt tagcaatata tcccgacagg gggttataca ccttagggtt
      181 catttcaaaa ggcaatagcc ctttccagtc ccattttccc gtaccaggaa cgggtaatcg
      241 cggatcatgg cctgattgac gatctggata agcaccagta tgaacataac caatattgcc
      301 gtttacatca gcatagtacc agttgatggt cagtgcttgt ttcgctactc ctgccaattt
      361 ttggccttca tctgatgagt ccaggccagc aaagacgcca cctctttacc atcccatgcg
      421 cgggatttag cgtaagccgt ttgtgtcgtc tggtcagttt ggagaatgtt gccatgcacc
      481 gtacgccaga cagtaaaggt ctctgcctga ccatttttca ccgtaatggt ttcctcacgg
      541 cttaacattt tcacccactt acaattatgt aagtagtagc ctggtttctc tgccgacagc
      601 cgttcagcaa aaatatcgac atcatcgccg aaacctgccg ttgatcccca ggaaatcaca
      661 ccattatgac caaaaaccag cccaggatag gcaaatggtg tattgccagt gacatcataa
      721 ccagcaccgt gcagaccaat accataagta tacgcaggcg cataccagcc aaactgcgga
      781 ccatttacca tgattgcttt cgcatcctgg gctttgcttt tgccgatcac ccacatattg
      841 ctggtcgttg gataccccgc cagaccattg gcaccaccct gtgcaaattg tgcagcaata
      901 gtttcccggt tcttccctgc tgttaacgcc agcagtgcgc catccgcccc ttttgctggt
      961 cggtcaagca ttggtgcagg taaatcgtag cgtggcaaca gagctgctgt ttgcgagttt
     1021 tgctgattaa atttaagtgg gtagctactc tcttgtacgg caatagtggt tggcgctgat
     1081 gggtttacca gccatttcaa ctgattaaat accgccatgc cttgtgatac accatattta
     1141 tcttttaaag ccgttagcag tgccagatta tcaatttcgc tagtgctatc agagaagcgg
     1201 tttgccatgg tgcccacaaa tatcatcgcg acatcaaacg gttcccagcg cttaggagta
     1261 aagccaaatg tattaaactg ttttggtaag agcgtctctg gattggtatt taccttatca
     1321 atccaggcat tcattccatc agcgtagcct tgcagaatgg acatatcctc tggggaaagg
     1381 gcatcaattt gcgcccggat agcatccggc cagtagttac gacggatatc tttatcaaat
     1441 ttcacaaaat ctttgccaag cacttccgcg acagtccctt gagtactgcg acgtgccatt
     1501 tccatctgaa aaaggcgatc ttgtgctact acatagccat agccataaaa taggtgccat
     1561 gtatcattgg cataaatatg cggcatgccg tattcatcgc gaacaatctt tatctcactt
     1621 gacgactgct cagccagtgc aggtaagctc caataataca tcagggaagc agtaacacag
     1681 ttcacgatca tacgatttct attt
//
LOCUS       DAJVUK010000291         1657 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.296, whole genome shotgun sequence.
ACCESSION   DAJVUK010000291 DAJVUK010000000
VERSION     DAJVUK010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.296"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            3..1258
                     /locus_tag="OQQ57_004255"
                     /pseudo
     CDS             3..1258
                     /locus_tag="OQQ57_004255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415521.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YccE family protein"
BASE COUNT          543 a          261 c          340 g          513 t
ORIGIN      
        1 atatgggtag taatatacat ggaattagtt gcactgcaaa taattatttg aaacaggcct
       61 ggaacgatat aaaaaatgag tacgaaaaaa atcaaacata ttcaatcacg ctttttgaaa
      121 acacactggt gtgttttatg cggttataca atgaactcag acgtaaagta aatgaagagg
      181 atactccatg tctggaatgt gaatcactag aaaaagaatt tgaggaaatg cagaatgata
      241 atgatctatc attatttatg agaacattgc gtactaatga tacacaaatt tattcagggt
      301 ttcaggaggt attacatata ctatacaata tgttcaaaat gttgatattg ttagagtgtc
      361 cttgccgggc agaggttcag agtctatcac agattttaaa ggttattatt ggtatggctt
      421 tatggaatat attgaaaaca ttactgcgtg tgatgatgtt ttttctgagt attgtttaga
      481 tgatgaaaat atgagtatcc agccagaaca gataaatacg ccgggaatat ctgatttaga
      541 tactggtatt gatttgtctg gcatatcttt tattcagagt gaaattaata aaacatatgg
      601 attaaaatac gctccagtag atggcgatgg atattgtctg ttaagagcca tactggtttt
      661 aaaagaacat gagtattcat gggcgctggg cggccataag acgcaaaagc aagtatacga
      721 agagtttatt aaaattgttg ataaacaaac gatcgaggct cttgttgata cggcattcta
      781 taatctcagg gaagatgtaa agacgttatt tggcgttaat ctacaatctg acaacaaaat
      841 tcaggggcag ggtggttttt tatcatggag ttttttgtct tttaaaaaag aatttattga
      901 tagttgcttg aatgacaaaa aatgcatact gcatttaccc gaatttatat ttaatgataa
      961 caaggtacgc cttgttttag acaccgaccc agagcagagg gttaatgagg tgaaaaattt
     1021 cctcactgct ctttcagata gcatttgctc attatttatt gttaatagta atatggcatc
     1081 aatctccttg gggaatgaat ccttttcaac agatgacgac cttgagtatg gttatttaat
     1141 aaacactggc aatcattatg atgtttacct ccctcctgaa ctttttgctc aggcttataa
     1201 gttaaaaaat aaggaaatga atgcgcaact cgactattta aatcgttatg caatttaatg
     1261 gcaaaggcat atgctaaaaa ccattgttat tagtctcaca cttttttatt ggtaaatatt
     1321 gtctctgtat tggtaacgcc gcagatattc tgtttagcca caggtgcaat tatcagcggc
     1381 gtacgcgagg caggggctaa tcaggcatag tttgcgtcaa accttgcctg tttttgaaga
     1441 tgtatataga aaaacaggcg ttcaacaagc cattttgcga acctgttccc ggaaaaaagt
     1501 catatttctg tcacactctt tagtgattga taacaaaaga ggtgccagga atgaacaaaa
     1561 cgctaatcgc cgcagctgtg gcagggatag ttttactcgc ttcaaacgct caggcacaaa
     1621 ccgtaccgga aggctatcag ctacagcaag tgctcat
//
LOCUS       DAJVUK010000292         1640 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.297, whole genome shotgun sequence.
ACCESSION   DAJVUK010000292 DAJVUK010000000
VERSION     DAJVUK010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.297"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..940)
                     /gene="corA"
                     /locus_tag="OQQ57_004256"
     CDS             complement(<1..940)
                     /gene="corA"
                     /locus_tag="OQQ57_004256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HCS1958764.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRK"
     gene            1310..>1640
                     /locus_tag="OQQ57_004257"
     CDS             1310..>1640
                     /locus_tag="OQQ57_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958765.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFSVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQQ"
BASE COUNT          423 a          424 c          412 g          381 t
ORIGIN      
        1 tcttccgctt aaagtacaga tacggtgcca ggcccgcgag gatcataaag ataatcgcgc
       61 cagggtagcc gaagctccac ttcagttctg gcataaactc aaagttcatg ccatagctgg
      121 aagcaacgag cgtcggcggc aggaatacca cggataccac cgagaagatt ttgatgatgc
      181 ggttctgctc gatgttgata aaacccatcg ccgcctgcat caggaagttc accttctgga
      241 acagagattc gttatgcggc agcagggatt cgatatctcg caggatttca cgcgcctgct
      301 ccagttgtcc acccggtaag cgtgctttac gtaccaggaa gttgagcgcg cgctgggtat
      361 ccatcagaca caggcgtact ttccagccga tatcttccag ttccgccagc gtggagagcg
      421 cctcatcgta ctcatcgccc tgatgccctt ccataatcac ccggctcaac tgctccaggt
      481 cgctatagat attttcaatt tcatctgcca actgttcgat tttggtttcg aacagatcca
      541 gcagcagctc gtaggcgtta ccgtctacca tcgactggct acgggcacgc atacgataca
      601 gacgaaaagc gggcagttca cgctcacgca gagtaaacag acgaccatca cggatggtaa
      661 atgccacagt ggagttaccg gcgtgatctt ccgcatcttc aaagaagaag aaggagtgaa
      721 tatgcaggcc gtcgtcgtct tcaaagaaac gtgccgatgc ttcgatgtct tccagttccg
      781 ggcgggttgc caggctctgg ccaagttcag attgtacacg cagtcgctcg tcgtcgtccg
      841 gttcgacaag atcaatccat actgcattta caaggggttg tgactcttcg acttccagcc
      901 gggtcagtcg gttattttcc agttgaaatg cgctcagcat gaccgggact cccaatgctt
      961 aaaatatcgg acagttcggt gggcacacag aaacaaattg ggtttcagac cattaaacag
     1021 cctgactcag cgcgacggga aaaattgagg tcgctgacaa ccgctaaggc tatcagcaaa
     1081 aagggatagc cttaggagtt gatcctggat gacaggatag tgagccagta tctactgggt
     1141 gtgtccaagg cgaatgtcct cttagaatga tcgtgcgcgc atgttacgcc agcaaaattt
     1201 tgccgtcaac acgcaacaga acaccacaga acaatagttg aacttcgcgc tttttggtac
     1261 tcctcaaggt cgctaacagg ataaaaaaat cccacatcca ggacctataa tggcgcatcg
     1321 gctactcatt ggtaaaggaa tgatcacctt gaatctcaaa cggatttttc tcaccctcac
     1381 cttacttccc ttgttttctg ttgccgctga tgattgcgca ctctcagatc cgacgctgac
     1441 cgtacaggcg tataccgtta atcctcaaac agagcgggtg aaaatgtact ggcaaaaagc
     1501 caatggcgaa gcgtggggaa cgttacatgc tctgctggcg gatattaata gtcagggtca
     1561 ggtgcagatg gcgatgaacg gcggcatcta tgatgaaagc tatgcgccgc tcggtttgta
     1621 catcgaaaac ggtcagcaga
//
LOCUS       DAJVUK010000293         1610 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.298, whole genome shotgun sequence.
ACCESSION   DAJVUK010000293 DAJVUK010000000
VERSION     DAJVUK010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.298"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..586
                     /locus_tag="OQQ57_004258"
     CDS             <1..586
                     /locus_tag="OQQ57_004258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCS1958766.1"
                     /translation="VLLVDHQAGLLSLVRDIEPDKFKNNVLALGDQAKYFNLPTILTT
                     SFETGPNGPLVPELKAQFPDAPYIAHPGNINAWDNEDFVKAVKATGKKQLIIAGVVTE
                     VCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHR
                     DWHNDIEGLATLFSNHIPDYRNLMTCYDTLTKQK"
     gene            complement(621..1484)
                     /gene="dmsC"
                     /locus_tag="OQQ57_004259"
     CDS             complement(621..1484)
                     /gene="dmsC"
                     /locus_tag="OQQ57_004259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit
                     DmsC"
                     /protein_id="HCS1958767.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(1486..>1610)
                     /locus_tag="OQQ57_004260"
     CDS             complement(1486..>1610)
                     /locus_tag="OQQ57_004260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HCS1958768.1"
                     /translation="AAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
BASE COUNT          435 a          446 c          391 g          338 t
ORIGIN      
        1 cgttttgctt gttgatcacc aggctggttt actttccctt gtacgggata tcgaacccga
       61 taagtttaaa aataacgtgc tggcgctggg tgaccaggct aagtatttca acttaccaac
      121 tattcttacc accagttttg aaaccggtcc taacggccca ttagttccag aactgaaagc
      181 acaattcccc gatgcacctt acattgctca cccgggaaat attaacgcct gggataacga
      241 agattttgta aaagctgtca aagcgacagg taaaaaacag ttaattattg ccggtgtggt
      301 aaccgaagtt tgcgtggcat tcccggcgct ttcagccatt gaagaagggt ttgacgtctt
      361 tgtcgtgact gacgcgtcag ggacctttaa tgaaattacc cggcattcgg catgggatcg
      421 catgtcgcaa gctggtgcgc aattgatgac atggttcggc gtggcgtgcg agctgcatcg
      481 cgactggcat aatgatattg aaggactggc gacgttgttc tctaaccaca ttcctgatta
      541 tcgtaatttg atgacctgtt atgacacgtt aacgaagcag aaataaaaga gaaccggggc
      601 cgaaaccccg gttgttatga ttagcttgcg acggccatcc ccacggtcat atgcaaacca
      661 tagaatacgc cgcgaccgat taattcccct gccagaagca gaatgaatga tacagaaagt
      721 agcggaaccg caggctgata accttttagc tgtggtgcaa tccacaagca cagggcaacg
      781 gccaaaagca cgatccgcca ggacatcagc gcaccatagt ccggcaccag cgctgcggcc
      841 tgctgcacag aactatgaat agtcgccagc tctgcgccct gcatcactga caccacgcca
      901 ctcactacca gtgccagtac agaaattgct ggcagcagac gcatcgccca gccatcgacg
      961 ccagccagac tcaacaacag gtaacccagt aacgggccgc ccataaacat cgtcaggaag
     1021 aagcccatcg gcgtccagat gctgtaccag gtcggaacgg tatcaatgct gttatacaca
     1081 cgcaccatca tccagacaaa gatgacgcca agaaccatcg tcactatcag ccacagcgta
     1141 cgcaatgccg gtgacagctt tttcagcatt gccagcaacc agccgatgcc gcctacggca
     1201 aaaaagatcg aaccgctggc gatttcgtta ctgagtgctg aagcccctac ccggttgagc
     1261 gagttaaaag cgcgcattgg tgaaccaaga tggagcatag aggcgataaa gccaatgccc
     1321 atcagcaccc ataaaccaaa catgcaggcg ataacacgct gctgggcttc tgctcgcagg
     1381 tcgcctttga gcagcgccaa agccagaacg ataaaaccac ctgctacaca ttgcccgaag
     1441 accgtgaaga tcatcagcgg ccattcatgc catccacttc ccatctcaca cctccttcgg
     1501 gtttgccaga tagccagtgg tatccccggt cgggcggcta ttggcattgg gtttgatcac
     1561 aatattcggt ttggtaaagt gagctcgcgg caacggcgca acggccgcca
//
LOCUS       DAJVUK010000294         1606 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.299, whole genome shotgun sequence.
ACCESSION   DAJVUK010000294 DAJVUK010000000
VERSION     DAJVUK010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.299"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..167)
                     /locus_tag="OQQ57_004261"
     CDS             complement(<1..167)
                     /locus_tag="OQQ57_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958769.1"
                     /translation="MPIMLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGE
                     NRNEAVSLLKE"
     gene            complement(420..515)
                     /locus_tag="OQQ57_004262"
                     /pseudo
     CDS             complement(420..515)
                     /locus_tag="OQQ57_004262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(551..856)
                     /gene="ccdB"
                     /locus_tag="OQQ57_004263"
     CDS             complement(551..856)
                     /gene="ccdB"
                     /locus_tag="OQQ57_004263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858358.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin CcdB"
                     /protein_id="HCS1958770.1"
                     /translation="MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSD
                     KVSRELYPVVHVGDESWRMMTTDMASVPIFVIGEEVADLSHRENDIKNAINLMFWGI"
     gene            complement(858..1076)
                     /gene="ccdA"
                     /locus_tag="OQQ57_004264"
     CDS             complement(858..1076)
                     /gene="ccdA"
                     /locus_tag="OQQ57_004264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin CcdA"
                     /protein_id="HCS1958771.1"
                     /translation="MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERW
                     QAENQQGMAEIARFIEMNGSFADENRDW"
BASE COUNT          417 a          365 c          361 g          463 t
ORIGIN      
        1 cattctttaa gtagggagac cgcttcattc cgattttcac cggggagcgc ttgtttttcc
       61 catttatccc atgctgaaaa gtaatcagca tatgtaccgg aaatagtgtt ataaaaagaa
      121 ttttggggca atgaaaagtt attatttatc ggtaacatga tgggcatcca gttaaagccg
      181 gtggacaaat ggctttgtta aaagaaataa gcaggagttt ttatgaagtt cattccatga
      241 aatgaacttc agcacttttt tattataata aggataaaca aaattggctg taaaaaaacg
      301 atactgtttc agttaaccgt gaatggcctg tttgcaccgt attgttcttg tttttcggtt
      361 agttaaacat cgtacttcat atttgaacgg taagcggctc gtcagaaccg tattgatatt
      421 tactgagagg tcagatcaac tttccagggc aacagatcgc gtacccggtt tgccggccag
      481 tcttggatat gctcaatgac gtaacgcagc cattttgtca acgccacgat ttttgaccct
      541 agcctgacat ttatattccc cagaacatca ggttaatggc gtttttgatg tcattttcgc
      601 ggtggctgag atcagccact tcttccccga taacgaagat cggcacactg gccatatcag
      661 tggtcatcat gcgccagctt tcatccccga catgcaccac cgggtaaagc tcacgggaga
      721 ctttatctga cagcaggcgg gcactggcca gggggatcac catccgtcgt ccgggcgtgt
      781 caataatgtc actctgtaca tccacaaaca gacgataacg actctctctt ttataggcgt
      841 aaaccttaaa ctgcatttca ccagtccctg ttctcatcgg caaaagagcc gttcatttca
      901 ataaaacggg cgatctcagc catcccctgc tgattttcag cctgccagcg ttccgcacgc
      961 agacggcggg cctctttttg catggccgta tttaccaggc ctgagatatt cacgtttgcg
     1021 gatttaagta actgatagct gtcactgtct atagtgacag taatacgctg cttcatgata
     1081 agccctcaaa aacatactta tgatatgtat atgagtatat attaatggta caaaccatca
     1141 atatccataa aaagtacacc attaattcac tataagtttt taatacaatt ttttctgctg
     1201 cgattttttt atacgataat tagcatactt ataacaccgt aagtaaatta catgaaagca
     1261 ggcacagcgt gatccgattt ttctgcgtat aacgattttc cggaagtgta atacggttgc
     1321 gccccgggcc gggcaccctt ttctgttgtt gtgtacgggc ccacagagaa tggtaccgga
     1381 ggcgggctca gaagtactga gtcgggtgat cgcgtcaggc cgcgaagtac tgacacgggt
     1441 attggtgact ggtgatgaag tactgccccg ggtatgattt caggctgatt caggttctga
     1501 ttctctgtca gtccgcgtgg ttgctggcct ggctgatttc ctgttgtcag gcgttcaaca
     1561 accgactgca ggttatagcc cggttcacga accacggcag cctggc
//
LOCUS       DAJVUK010000295         1575 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.300, whole genome shotgun sequence.
ACCESSION   DAJVUK010000295 DAJVUK010000000
VERSION     DAJVUK010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.300"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(306..1454)
                     /locus_tag="OQQ57_004265"
                     /pseudo
     CDS             complement(306..1454)
                     /locus_tag="OQQ57_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309010.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT          503 a          415 c          346 g          311 t
ORIGIN      
        1 gttattaaca acgttgccaa aaccccagac agtgataaaa gacatcagcg caatgttgta
       61 ccatcgcagc tgtttttcct gaacattccc agccatagac aaatccttcg ccaaaattat
      121 aggggcatct gtaaaacgag ggattatgcg cggcaaataa gaagtgcgga aatagcgaaa
      181 tgcaaaatta taacctgctg cacattttat ttttaaacga ataaaatttg gaataaagca
      241 agtcagatag aagaaacaaa aaagcagagt gtgaaacagt aagttcacac tctgcttgaa
      301 ttcatttaca cgtgagcaac gggtttcggc gtatgaccgg cgttgcgcag cagcatcagc
      361 aaatagataa acgatacgct ggcgatcatg ataaacaata aattatcgga gaaattctgc
      421 attagcatag cggtaaatga cgggccaagc agacttccca cagtatagct caacagtaag
      481 gcctagttca tcgccaccag ttgatgatgt tcaactttct cgcaagccca tgccatcgcc
      541 accggatata gcgtaaagcc agcggcaccg aggatgaata acgctggggc catcgccgcc
      601 tggctaagca tcgcgatact gccgagaatg acgacaaaga cctgaacacg caacaccagc
      661 agtcgaccaa acttatccgc cagacgtcca atcgaccatt gtccaaggat acccgcactg
      721 accagtaccg ccatccagaa accaatgctg gcattgctca cccctttgtg attgaggtac
      781 agcggcatca ggccatatag agatcccaga acgattcctg agataatgca gccattcacg
      841 ccaagccgcg cctgacggag ttttagcatt gacgtaattg acgtcgaatc atggttttca
      901 gcctgctgat tcagcacacg cgtaaacaac agcggtaaga tccctgccaa cgtcaaacct
      961 gtaacccacg gcaatacgga catcagctcg gttgaaactt tgctgaccag taactggcct
     1021 aaaaacgttc ccacgtaata aaccatcata tacgcagcaa gcaaacgccc acggttacgt
     1081 gacgtcccac tgcacatcag cgcgctctca acaaccaccc aaatcatggc acagccgacg
     1141 cccgcgacaa aacgccaagc caaccagctc cagaatccaa tcatcaggcc aaggccggca
     1201 cagccagcgg caaaaatgaa ggaggccaga taatagctgc ggttaaagcc aatgcgctta
     1261 atgacatacc ctgtcagcaa tgtaccgaca aggttgccgg taaaatagga tgagctgaca
     1321 acgcctacct gccatgtgga catgtgttcc tgggcgagcc aaagcggcac gagtgtattt
     1381 aacaccgcaa tcgccagagt caacaaaagc aggccagaca gcaaaagcat gacaggccgg
     1441 gtatacgtgg acatgaatta aaaccgtgag gaagttcaaa tttcatgcgc atcatgccac
     1501 cgccaaaaca ttgtcaatga gtgaaaatac gcgatatccc agcggcggta ttatcgattt
     1561 atattactca ttcat
//
LOCUS       DAJVUK010000296         1557 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.301, whole genome shotgun sequence.
ACCESSION   DAJVUK010000296 DAJVUK010000000
VERSION     DAJVUK010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.301"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(38..316)
                     /locus_tag="OQQ57_004266"
     CDS             complement(38..316)
                     /locus_tag="OQQ57_004266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HCS1958772.1"
                     /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQST"
     gene            424..1134
                     /locus_tag="OQQ57_004267"
     CDS             424..1134
                     /locus_tag="OQQ57_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HCS1958773.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSDEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPAVERVYTIKNTIDYY"
     gene            complement(1137..>1557)
                     /gene="speG"
                     /locus_tag="OQQ57_004268"
     CDS             complement(1137..>1557)
                     /gene="speG"
                     /locus_tag="OQQ57_004268"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HCS1958774.1"
                     /translation="TTSHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIIS
                     PEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFTVEGELMHE
                     FFINGQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ"
BASE COUNT          426 a          338 c          383 g          410 t
ORIGIN      
        1 cgataatgta ttactgcggt tcggcaggcg cgccatccta ggtagactgc gcgggagcag
       61 agacgttagc gctggtggtg cgggtgtaga gaattttatg cgtatcatta gcacaatgcc
      121 cgacgacctg ggaatcaggc tgatcaacct ggtcattggg tacaatactt aatgtgaagc
      181 tgctttcggg tacgccatta ttgataatgc gctgtgatat atcgctctgt atgcgctcac
      241 aggatcccgg cgcggcgagt accgcgggtg aggcgagggc gagcagaagc gcggcacagc
      301 aggttgagag tttcatcata agctccttac gcgaagataa cttctttaag catagcattt
      361 aacgtgtaaa gtactgtatt tgctactatg attgagaatc atctctactc tctggtgact
      421 gttgtgaaat acaaattact accatgctta ctcgcgatat tcctcacagg atgtgaccgc
      481 acagaggtaa cactttcatt tacccctgag atggccagtt tctctgatga attcgatttt
      541 gatccgctgc gtggtccggt aaaagatttc actcagacat taatggatga gcaaggtgaa
      601 gtgacgaaac gtgtttctgg gactttgtcg gaagaaggct gttttgattc actcgaatta
      661 ctggatctgg aaaataatac cgtggtcgct ctggtactgg acgccaatta ttaccgtgat
      721 gccgagacgc tggagaagag agtacgttta cagggaaaat gccagctagc agaattacct
      781 tctgccgggg tgagttggga aaccgatgat aatggcttcg tgattaaagc cagcagcaaa
      841 caaatgcaga tggaatatcg ctatgatgat cagggttatc cactgggtaa aaccacgaaa
      901 agtaacgaca aaacattatc tgtcagcgcc acgccatcaa cggacccgat caaaaaatta
      961 gattacacag cggttacttt actgaataat caacgagttg gtaatgtaaa acagagctgt
     1021 gaatatgaca gtcacgccaa tccggtggac tgtcagctga tcattgttga tgaaggagta
     1081 aaacccgccg tcgaacgggt ttacaccatc aaaaatacga tcgattatta ttaatgctat
     1141 tgtgcggtcg gcttcaggag agtctgaccc ggtgttttgt gctctgccag atactgatgc
     1201 tggaatatac acatgcgaat ggcattacga tattgaccat taataaaaaa ctcatgcatc
     1261 aattcacctt caaccgtaaa gccaagcttg cggtaaatgt gaatcgcttt ttcattctct
     1321 ttatcgacga tcagatacag cttatagaga ttgagaacgg tgaagccata gtccattgct
     1381 aatttggcgg cacgggttgc cagacctttc ccctgatact ccggggagat aattatctga
     1441 aattctgccc ggcgatgtac atggttaatt tccaccagct ccaccagacc ggctttttcg
     1501 ccgtcacatt ccaccacaaa gcgtcgttcg ctctgatcgt gaatatgtga agtggtc
//
LOCUS       DAJVUK010000297         1549 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.302, whole genome shotgun sequence.
ACCESSION   DAJVUK010000297 DAJVUK010000000
VERSION     DAJVUK010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.302"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(328..453)
                     /locus_tag="OQQ57_004269"
     CDS             complement(328..453)
                     /locus_tag="OQQ57_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001431667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HCS1958775.1"
                     /translation="MWLPVLFRFLVDSLATLGHRLAASGITSRMLSVIPVLFFWG"
     gene            956..1432
                     /locus_tag="OQQ57_004270"
     CDS             956..1432
                     /locus_tag="OQQ57_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000469298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1958776.1"
                     /translation="MFIDSEKRLKQLSDEAKKNTEDLEEAKKNSRFTQVSPKGWERVR
                     ELLKDSQGISALKLYSFLAEHIDPTCGAVVADQQFLAEKLGVSRSTIIRWLNYLESKN
                     ALVRIPVAGKVCAYALDPHEVWKGYNTTKNHAAFVTKTLVNKDGDIQRRIMAMFSN"
BASE COUNT          402 a          382 c          403 g          362 t
ORIGIN      
        1 aaaaaaaacc gagccgccac ggttccggcc gcgccttgag cgctaccgga aaccgtctgg
       61 ggagaacccc agacccccat cgctgcaaca ccgacggtct acgaccacct accaaccgca
      121 tggctgcctg ttccgtgcaa atgagctttg cagggggctg gcgcggttcc tggcgacctg
      181 aaagcccctg gttaggggta tcggcgcgct tgacctcctg agagcctctg taagcgtttt
      241 tcgcgccttc catgccctgg cgggcatcta aaacccgttt cgtgcgtctg agagcttttg
      301 agcgcgtttg aggggctatc tggcgactca tccccaaaag aacaacaccg ggatcaccga
      361 caacatgcga gaggtgatcc cgctcgccgc aagtcgatga ccgagcgtag cgagcgaatc
      421 gacgaggaag cggaagagaa ctggaagcca cattgagcac ttacgcactg atgtggggtg
      481 tcggggtgaa gccctgacca agtggtaatc gtatcggcgt gcatgcgcgg ttatacgatt
      541 acacatcctg tcccgatttc tgaggcgttt taacggtgaa cggacggcaa aaacacgatg
      601 gagctgttga acgtgaaaac cacgaaatct ggcaaaaatc acggctggcg aggcttgcat
      661 aggagtaagc cagtatacac tccgctatcg ctacgtgact gggtcagggc ttcgccccga
      721 cacccccaaa gggcgttgcg ttgcacgcaa cacccttacc tagaatagat cttttacgcc
      781 gatttgtaag tggttgtttt tttagtgtgt tttttattta cctgtcgcat ccaggatgac
      841 acaacgttgt cgcatcctgg atgcgacaac acgcaacaag gtgttgcata gatgtgtcat
      901 gatggcttag atttgaacca acgttagtgc atgggatttt cagagggaaa aaatcatgtt
      961 tattgattca gaaaaacgac tgaaacaact ttcagatgag gcaaagaaaa acaccgagga
     1021 tctcgaagaa gcaaagaaaa attcaaggtt tacacaggta tccccaaaag gttgggaacg
     1081 tgttcgagag ctgctgaagg atagccaagg catatcagca ctgaagctgt actcattttt
     1141 agcggagcat atcgatccta cgtgtggcgc tgtcgttgcg gatcagcaat ttctagctga
     1201 aaaacttgga gttagcagaa gcacaattat tcggtggctc aattacttag aatcaaaaaa
     1261 tgcattagtt agaatccccg ttgctggtaa ggtttgtgcg tatgccctcg atccacatga
     1321 agtctggaag ggatacaaca ctacgaaaaa ccatgcagcg tttgtcacta aaacactggt
     1381 caacaaagac ggtgatattc agcgccgaat catggccatg ttttcaaatt gagctagcgg
     1441 caggcggaca atcaggggct acgtgttaac gttctgacca tgattgtcta tcctgcattg
     1501 ctcttttgcc gcctcaaaat cctttgcgtg tttttgctcc ccgttctcc
//
LOCUS       DAJVUK010000298         1527 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.303, whole genome shotgun sequence.
ACCESSION   DAJVUK010000298 DAJVUK010000000
VERSION     DAJVUK010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.303"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..1386)
                     /locus_tag="OQQ57_004271"
                     /pseudo
     CDS             complement(1..1386)
                     /locus_tag="OQQ57_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313048.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SopA family protein"
BASE COUNT          525 a          266 c          224 g          512 t
ORIGIN      
        1 agcgctggga gcttaccacc ataacaggcc catcatcgac agaggagaac aggataaata
       61 tattatcgtt tcgtgttaat ttattagtgt taaaggttct taacttttct tcagtttcta
      121 taaatatagg tgaaacatca tcactacgaa tccactcttt ataaagatac caggcatttg
      181 ctttgatcat atcatccgtt gatcgtaagg cctgatcgat aagttggata aaaaaattgt
      241 tatttttatc aatcagccct ttattcatat taaacctgtt aataaaatgg atcatctgtt
      301 gggtatcgaa atccaccttg ctgaatcgat gttgacgcat aaaatcatcg aacttgttat
      361 cttcaccaga atggatataa ctgcgtataa ttggatcttt tatataagga caatggctaa
      421 atgttttctt catattctca ataaagtttt tattaacaat attaagaatt tttaattgca
      481 taaccagttt tactgccaga acggatttca atatcattgc attatctggc aatgtatcaa
      541 tcatttttat aatgttattg atataaccat cgagatcttc attcccaaat atatctgaat
      601 aatcaatagt taattccaat tgttctgtaa tgcaatcttt aaaattccct gtcgacattc
      661 gcacatgatc aaacataaca gctgtcaaat tcgatttaat aaatgatatt tctttggcag
      721 acagaaactc tgctctggtg aagtgcgaag cgtaaagata acaattatcg aagtttgaat
      781 ttctaatctg acattcgcga aaattactat gaccaagttg actctgcgag aagtcaactg
      841 tatcaagaat atcttggcta aaatcaacac attcgccact cgttttgaga aaaatcacat
      901 tgtgtaaacg tcgacattta aatatgacat tatcaactgt tgccttagta aaattgcaat
      961 tctcaatttc tttacattcg aaagttacat gttgtagatt tgatgataaa aaagacacct
     1021 tagaaataac gtcaccttta aaatgacaat ttgttacatc aaaatcagac aggtcgatat
     1081 acccctgcga atctttatcc atcagaaaat tacaagcgca ttctattttt tcatttctgt
     1141 agaattttac acttatagta tcattactaa ttgagacttc acgtaacata tttattgcat
     1201 gattttttcg ttccgttgtt ttatatttaa aaatatatca ctgatataaa taaagttatc
     1261 tctgtttaaa cctgtcaccc cattgaaatt acgtagtaaa tcaagatcta ctatattatt
     1321 tccttgaacc acatcatgtt tcatcaaaga gttattgcca ccagaatttg tgatatgacc
     1381 tatcataaaa cctctgtaat acagaaataa aataacctgg aaaagtagcc tgagcgtcca
     1441 gacactaccg gcgaaaggaa aagaatctct gataaggcat tgagataatg gacattctta
     1501 gtgaagaaga agtgaagtac tataaaa
//
LOCUS       DAJVUK010000299         1495 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.304, whole genome shotgun sequence.
ACCESSION   DAJVUK010000299 DAJVUK010000000
VERSION     DAJVUK010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.304"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..1493
                     /gene="pdeB"
                     /locus_tag="OQQ57_004272"
     CDS             <1..1493
                     /gene="pdeB"
                     /locus_tag="OQQ57_004272"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HCS1958777.1"
                     /translation="PVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQ
                     ELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPGK
                     ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA
                     HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKG
                     WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN
                     GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP
                     QQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRY
                     REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKL
                     KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL"
BASE COUNT          396 a          350 c          367 g          382 t
ORIGIN      
        1 tgcctgtcgg cttaagcatc tggctggccc atcagcaggt agaaacatcg tttattgaag
       61 agctggatac ctattcctcc cgcgtcgcta ttcgggccaa taaggtggcg acacaaggga
      121 aagatgcgct gcaagagctg gaaagatggc aaggcgctgc ctgtagcgaa gcccatctca
      181 tggaaatgcg tcgggtatct tacagttatc gctatattca ggaagtggtt tatatcgata
      241 acaacgttcc ccagtgttcg tctctggagc atgaaagtcc gcccgatacc ttccccgagc
      301 caggtaaaat ttcgaaagat ggttatcgtg tctggttaac atcgcataac gatttaggca
      361 ttatccgtta catggtcgcc atgggaacgg cacattatgt cgtcatgatc gaccccgctt
      421 cctttattga tgtcattccc tatagctcat ggcaaattga tgccgccatt attggcaatg
      481 cccataacgt tgtcataacc agcagcgatg aaattgctca gggaattatt accaggctac
      541 aaaaaacacc cggtgagcat atcgaaaata atggaatcat ttacgatatc ctgcccttcc
      601 cggagatgaa tatttcgatc atcacctggg cttcaacgaa aatgttgcag aaaggctggc
      661 atcggcaagt ctttatttgg ttaccgctcg ggttggtgat tggcctgctg gcagcgatgt
      721 ttgtgctgcg tattttgcgc cgtatccagt caccgcatca tcggctgcag gatgctatcg
      781 aaaatcgtga tatttgcgtg cactatcagc cgattgtctc cttagccaat ggcaaaattg
      841 tcggtgctga ggcactggcg cgctggccgc agacagacgg tagttggttg tcaccagata
      901 gttttattcc gctggcacag caaacaggcc tttctgagcc attgacgcta ctgattataa
      961 gaagcgtctt tgaagatatg ggcgactggc tgcgtcagca tccacagcag catatttcga
     1021 tcaatcttga atccaccgtg ctcacctcgg aaaaaatccc gcaattgctg cgtgaaatga
     1081 tcaatcacta tcaggttaat cccagacaga tcgcgcttga actcactgaa cgcgagtttg
     1141 ccgatccgaa aaccagcgcc ccgataattt ctcgctaccg ggaggcgggc catgaaattt
     1201 atcttgatga ttttggtacg ggatattcaa gtttaagtta tttacaggat ctggatgtcg
     1261 acattctgaa gatcgataaa tctttcgttg atgcgctgga atataaaaat gtcacgccgc
     1321 atatcatcga aatggcaaaa acactgaaac tgaaaatggt agcggaggga atcgaaacca
     1381 gtaaacaaga agagtggcta cgccagcatg gcgtgcacta cggtcagggc tggctctaca
     1441 gcaaggcatt accgaaagaa gatttcttac gctgggccga gcaacatttg tgaat
//
LOCUS       DAJVUK010000300         1477 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.305, whole genome shotgun sequence.
ACCESSION   DAJVUK010000300 DAJVUK010000000
VERSION     DAJVUK010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.305"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            7..81
                     /gene="yoaJ"
                     /locus_tag="OQQ57_004273"
     CDS             7..81
                     /gene="yoaJ"
                     /locus_tag="OQQ57_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HCS1958778.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(140..388)
                     /locus_tag="OQQ57_004274"
     CDS             complement(140..388)
                     /locus_tag="OQQ57_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCS1958779.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(536..718)
                     /locus_tag="OQQ57_004275"
     CDS             complement(536..718)
                     /locus_tag="OQQ57_004275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HCS1958780.1"
                     /translation="MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVN
                     TVRSYDTENEHDVCGW"
     gene            complement(722..1082)
                     /gene="yeaR"
                     /locus_tag="OQQ57_004276"
                     /pseudo
     CDS             complement(722..1082)
                     /gene="yeaR"
                     /locus_tag="OQQ57_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
     gene            complement(1255..>1477)
                     /locus_tag="OQQ57_004277"
     CDS             complement(1255..>1477)
                     /locus_tag="OQQ57_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HCS1958781.1"
                     /translation="QFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQYIR
                     TKKKLAKVGNSLIGLMFVGFAARLATLQS"
BASE COUNT          414 a          357 c          325 g          381 t
ORIGIN      
        1 ataaagatga aaaaaacaac gattattatg atgggtgtgg cgattattgt cgtactcggc
       61 actgagctgg gatggtggta acgtcacctc taaaaaatag caaaggctgc ctgtgtgcag
      121 cctttgtgca atttaagcgt taacttttaa tcttcctgta gataaatagc acgacaatcg
      181 caccaataac ggcaaccacg aagctgccaa aattgaagcc atcgacttta ccaaagccaa
      241 acagcgtgct gatccatccg ccgactacgg caccgactat ccccagcagg atagtcataa
      301 agaatccacc accatcttta cctggcatga tccacttcgc cagaataccg gcaataagcc
      361 caaaaataat ccatgacaga atgcccattg tttcctcact tatctgtttt gcattagcgg
      421 gttagtcgct gataaaaagc atagcacaac atcgggaggg caagatttgt gacgagcatc
      481 acggaggatt tttttgcgat ggcgcagaaa ttgcgccatc aacgatcagt gataattacc
      541 aaccacaaac atcatgttcg ttttccgtgt cataagaacg cacggtattc accagatctt
      601 ttatcacttc agccgccact tctggcacca gcaaagtcat cggcgtctct gtttcataat
      661 cgacagaaac gccattactg ttattggtga cggtcacggt atacgttgct ttgcccatga
      721 ttcatttccc gttatgaatg actttccgtt gttgcgcacc ttccatcagg acttcaggag
      781 ccacgaagaa gtcaatgttg acataagtat cgtcagtcat ggcttcaatg ttgtgccact
      841 tttctggagg gaacaccgca aactgccccg cttcgataag gatcacctga tcaggctctg
      901 cactgtgttc atcagcgtag ccgagatatt tgaccgcccc atgcataacg gaaaggcgtg
      961 ggtaaccccc ctggcgcgtt cctttatcaa gatgacgttc gaattattcc ggcaggcgca
     1021 gtttgtttat tccagaaagg cgttgagcgc gtatgaatat aattctgtgg gatttgcagc
     1081 atccttttcc ctccttcggt gaatgcgctg aaaacggttt attccagccg tttcagggta
     1141 cgcctgataa tttgcatttt aaataccatt tattggttac tttttagcac catatcagag
     1201 aaaaatcagg gaggattaca agtgggaagc ccgcgacaac gcgggctgaa tgtatcagga
     1261 ttgcagcgtc gccagtcggg cggcgaaacc cacgaacatc aaaccaatca gtgagttgcc
     1321 aactttagcc agtttctttt tggtacgtat gtactgcgtg acaaaagcac cagaaataat
     1381 caggaagctc aaatagcaga aactcaccag ttccagcgtc gtcgccagaa taaagaatga
     1441 aattcccgta tgtggggcat taacatcgat aaactgt
//
LOCUS       DAJVUK010000301         1477 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.306, whole genome shotgun sequence.
ACCESSION   DAJVUK010000301 DAJVUK010000000
VERSION     DAJVUK010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.306"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            394..1182
                     /gene="virF"
                     /locus_tag="OQQ57_004278"
     CDS             394..1182
                     /gene="virF"
                     /locus_tag="OQQ57_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858179.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family invasion system transcriptional
                     regulator VirF"
                     /protein_id="HCS1958782.1"
                     /translation="MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQ
                     IAFIERNIQINVSIKKSDSINPFEIISLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLN
                     KKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSAVSDEEALYTSISIASSLSFS
                     DQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLL
                     LNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF"
     gene            complement(1175..1477)
                     /gene="istB"
                     /locus_tag="OQQ57_004279"
                     /pseudo
     CDS             complement(1175..1477)
                     /gene="istB"
                     /locus_tag="OQQ57_004279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element IS100kyp family helper ATPase
                     IstB"
BASE COUNT          483 a          251 c          267 g          476 t
ORIGIN      
        1 ctcacggaaa gtcatactgc cttaccaata tcaacaccaa ccggatttgt ggagcctcca
       61 gtctgaaggg gctttatgcg ttccgtatag gatattatga tgctggagtt ttgcgaagct
      121 ccactccttt ccgaacattt acacagatat tgcctaagaa aagtgaaacc ataatatggt
      181 tatagtccct ttcagtgcaa atacttagct tgttgcacag agaaatagaa gctgcataag
      241 ctctttcttc aaaaaatgta aataaagtta aatataggaa aaattactta atctatctta
      301 ataacggaaa gattttgtat acaatcactg ttacagaaat ttcttagtta ctctgtaaac
      361 actaaatata gtttggtata ttctgttgaa tttatgatgg atatgggaca taaaaacaaa
      421 atagatataa aggttcgctt gcataactat attattttat atgcaaaaag gtgttcaatg
      481 acggttagct caggcaatga aactttgact atcgatgaag ggcaaattgc ttttatagag
      541 cgaaatatac aaataaacgt ctccataaaa aaatctgata gcattaatcc atttgagatt
      601 ataagccttg acagaaattt attattaagc attattagaa taatggaacc aatttattca
      661 tttcaacact cctattctga ggagaaaagg gggttaaaca aaaaaatatt cctcctctct
      721 gaggaggagg tttctatcga tttgttcaaa tctataaaag agatgccttt tggcaaaaga
      781 aagatctata gtttagcttg ccttttatca gctgtttctg atgaggaagc tttatatact
      841 tcgatatcga tagcttcttc tcttagtttt tctgatcaga taaggaagat tgttgaaaaa
      901 aacatcgaga agagatggcg tctttctgat atttcaaata acttgaattt atcagaaata
      961 gctgttagaa aacgattgga gagtgaaaaa ttaacatttc aacaaatcct tcttgatatt
     1021 cgcatgcatc atgcagcaaa gcttttattg aatagtcaaa gctatattaa tgatgtatca
     1081 agacttatcg gaatatcaag cccatcttat tttataagga aatttaatga atattatggt
     1141 ataactccaa agaaatttta cttatatcat aaaaaatttt aaatgcttca tagcccatcg
     1201 ctattgccag atgggttttc cccacacctg atggccctag taatacgata ttttcattac
     1261 gttctatgaa gctgagtgag cgtaacgact ggagttgctt ctgcggtgct ctggtggcga
     1321 atgtgaagtc atactcttcg aacgttttca ccgccgggaa ggctgccatt cgggtataca
     1381 tcgcctgttt acgttgatga cgtgccagtt tttcttcatg aagcagatgc tccaggaagt
     1441 ccatataact ccattcctgg tctactgcct gttgtga
//
LOCUS       DAJVUK010000302         1451 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.307, whole genome shotgun sequence.
ACCESSION   DAJVUK010000302 DAJVUK010000000
VERSION     DAJVUK010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.307"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..722)
                     /gene="pdeC"
                     /locus_tag="OQQ57_004280"
     CDS             complement(<1..722)
                     /gene="pdeC"
                     /locus_tag="OQQ57_004280"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HCS1958783.1"
                     /translation="MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRT
                     FAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDN
                     HFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPL
                     FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVY
                     STKRPIAAIVATSYQRLITHFY"
     gene            1152..1433
                     /locus_tag="OQQ57_004281"
     CDS             1152..1433
                     /locus_tag="OQQ57_004281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcB family protein"
                     /protein_id="HCS1958784.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT"
BASE COUNT          417 a          321 c          322 g          391 t
ORIGIN      
        1 ttataaaaat gggttataag acgttgatat gaagtcgcaa caatggctgc aattgggcgt
       61 tttgtcgaat aaactgtcgc atataaatag ccatttcttt gtacggttaa atccttcaaa
      121 tgaatcagcg gagaaaacgt tgctgccgag gcctctttgc ttaacgagaa aaaggttttc
      181 gtcaccgtat catacacacc ccattgcaat gtcggatcat cagacatcac ttcactccag
      241 aagagagggt tgataaccgc cacataattt ccccgctgca tataggtcat tttatagcca
      301 gagaaaaaag gcgtatcgcg gtaataatag atagaaacgt taggttcacg cttataatcg
      361 gccggtgcaa tcgtatagcc gtttacaggc gctatcagcg atgagcataa aaaatggtta
      421 tcacgggcat agatcaattc attaatataa agatagccac gaataatatt caacattcgc
      481 ttttgatggg ctggagtgca aacttgcccc tgatagcgtt cagctgcatc gctcactaaa
      541 tctgcctggc gaatgaccag ctcggattta tccagtgcca gttgagcaaa ggttcggagc
      601 tgattattca cttctgattt tgcccaaagg aaggcaatcc atagcgaaag aatgatggga
      661 aagagaacta aaaagataat gcccggcaac gccagtaatt ggtgtcgtgc acgatgactc
      721 attgctatca atttcctgcc tgtttatacc cggccattgt aaggtgaaaa ccctgggtac
      781 cgacgtcttt agataaatct tacggtataa atagcacttt tgcctgattt gaaattgata
      841 cctttctaat cgtcacctgg atgaaaataa ttcattgata ttcaaaatta atttcctaca
      901 ggaatgcaga ggcggcggga agatatgccc ttaatgccac tgaaaaacca cataatctgt
      961 acagcaataa aagtcacggc ctaatatggc taacaaacaa tcaattgtga tatatttcac
     1021 aaaattaatg aaacaaacag agtgtttcat ttttgtgttc tgcaagcccc gcgatagcca
     1081 gagtgtacca cgcctcccgt gaacaacgcc gcgctgtcca gggcatcggc tcttttcaga
     1141 ggaattgttt gatggctacc ctcaccactg gcgtggttct tcttcgctgg caacttctta
     1201 gtgccgtaat gatgtttctg gccagcacac tcaacatccg ttttcgtcgg tctgattatg
     1261 tcgggcttgc ggtgatcagc agcggtctgg gcgttgtttc cgcctgttgg ttcgcaatgg
     1321 ggttgcttgg catcacaatg gcggacatca ccgctatctg gcacaacatc gagtcggtga
     1381 tgatagaaga gatgaatcag acaccgccac aatggccaat gattttgacc tgatacgtag
     1441 aagcctccat a
//
LOCUS       DAJVUK010000303         1447 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.308, whole genome shotgun sequence.
ACCESSION   DAJVUK010000303 DAJVUK010000000
VERSION     DAJVUK010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.308"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..803)
                     /gene="ipaH4.5"
                     /locus_tag="OQQ57_004282"
     CDS             complement(<1..803)
                     /gene="ipaH4.5"
                     /locus_tag="OQQ57_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH4.5"
                     /protein_id="HCS1958785.1"
                     /translation="MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGT
                     TTENRIQAVRLLKICLDTREPVLNLSLLKLRSLPPLPLHIRELNISNNELISLPENSP
                     LLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPE
                     LPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQRLKYLKVGENQLRRL
                     SRLPQELLTLDVSNNLLTSLPENIITLPICTNVNISGNPLSTRVLQSLQ"
     gene            complement(1231..>1447)
                     /locus_tag="OQQ57_004283"
     CDS             complement(1231..>1447)
                     /locus_tag="OQQ57_004283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1958786.1"
                     /translation="AEEQKYEMLENEYSQRVADRLKASGLSGDTDAEREAGAQVMRET
                     EQQIYRQLTDEVLALRLSENGSRLHHS"
BASE COUNT          391 a          295 c          312 g          449 t
ORIGIN      
        1 ctttgcaggg attgcagaac gcgagtcgac aatggattcc ctgaaatgtt aacattcgta
       61 caaatgggca atgtgattat attttcgggt aatgaagtta gtaggttatt ggaaacatcc
      121 agtgtcaata gttcttgcgg taatctggat aatctgcgta gttgattttc acctaccttc
      181 aaatatttta agcgctgagg aaattctggt agttcctgta gtctgttgcc ggaaacaaag
      241 agttcttgta gtctatgagg caattcaggc aagacagtaa ggcgattacc ttcaatacgt
      301 aatattgtta gcgttgatgg aagctctggt aacgtctcca gactattaaa acgtgccgag
      361 agtgattgta aatatggtgg taatgatggc agacatgaca aatttcgatt gaatgaaata
      421 ttaagcttaa tcagttgaga tggaagtgtc gggagtatat tcaagttgtt accatttaca
      481 tgaagttctg tcaaaagcgg agaattttca ggtagggaga ttaactcatt gttggaaata
      541 ttaagttcac gtatatgcaa agggagtggt ggtaaagaac gtagtttcag taagcttaaa
      601 ttgagaacag gctcccgggt atccagacat attttcaata atcgaaccgc ctggatgcga
      661 ttttctgttg ttgttccttc cctagcccag tcatcccaga tgcggtggta atctctggta
      721 cactgttctt ctaccgataa acgagatata catgataagc cacaaaggga acgaaaaaaa
      781 gaatgattgt tgatcggttt catttattaa cccctcacta ttcatatctt ggtctattaa
      841 tgcaaataaa acgagaaagt ctttaaaaaa acaatcctag agctttatcg gcgttttcat
      901 tccagctgga ggaatatgtt cctgtctttc cagtaaccgt cgattgttat atcagtctac
      961 ccatgttaat gtgaccagtt ctactttcat ccagtttgga ttgatcttta tcccctatat
     1021 tttcaaacaa tttttatcat ttaactcatt actgtctcga tattcccata gcaaacgatc
     1081 tggttggtta gcccctcaaa aaagtcagtt gcacgccgta aatccctgcc ggtattgagc
     1141 gaggatttac gggttgttgt taaggtccgt aatcgggtca cagtttttcc ggagtcaatc
     1201 cggtctgcgg tttatgctta tgcgacgtga ttatgaatgg tgcagtcgtg agccgttttc
     1261 agacaatcgc agggccagta cctcgtcagt caactgacgg taaatctgct gttcagtctc
     1321 acgcatcacc tgtgcaccgg cttccctctc cgcatccgta tcaccgctca gacctgatgc
     1381 tttcagccgg tcagccaccc tctgagagta ctcattctcc agcatctcat acttctgctc
     1441 ttctgcc
//
LOCUS       DAJVUK010000304         1445 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.309, whole genome shotgun sequence.
ACCESSION   DAJVUK010000304 DAJVUK010000000
VERSION     DAJVUK010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.309"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>1445
                     /locus_tag="OQQ57_004284"
     CDS             <1..>1445
                     /locus_tag="OQQ57_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCS1958787.1"
                     /translation="KLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAEDRENV
                     NLSQFETDGQLPVGKYSLNAIINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTLLGFTD
                     EIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWDH
                     GIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQ
                     ANNLDFPRIYLFRPIPAINAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPPDLRGY
                     APQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEEDGQVT
                     QWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLHGG
                     SVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDTQLHNQDKETGYSYRANYSKRFEST
                     GSQLTFAGYRFSDKNFVTMNEYINDTNHYTN"
BASE COUNT          435 a          307 c          281 g          422 t
ORIGIN      
        1 aaaattaacc acaataagcg aattgattaa aaatatttat tgttcattat ccgttctcat
       61 cattggttgt gcgtcagctt atgccgttga attcaacaaa gatttaatcg aagccgaaga
      121 tcgtgaaaac gttaaccttt cccaatttga aactgatggc caattacccg taggtaaata
      181 ctcattaaac gctattatta ataataaaag gacgccaatc catctggacc tgcaatgggt
      241 attaattgat aaccaaactg cagtttgtct gactccagag caattaacat tattaggctt
      301 tactgatgag attattgaag aggctcagca aaacctgatc gatggttgtt accctatcga
      361 aaaagaaaaa caaattacaa cttatctcga taaagggaaa atgcaattat ccatatctgc
      421 acctcaggca tggttaaaat acaaagatgc aaactggacg cctcctgaac tttgggatca
      481 tggtattgct ggggcatttc ttgactacaa tttatatgcc tctcattatg caccacatca
      541 gggcgataat tcacaaaata taagttccta tgggcaggct ggggttaatc ttggggcctg
      601 gcgcctgcgt actgattacc agtacgatca gtcatttaac aatggcaaaa gccaggcgaa
      661 caacctggat tttccgcgta tttatttgtt tcgcccaatc ccagcaatta atgcaaaact
      721 aactataggt caatacgata ctgaatcctc tattttcgac tctttccatt tttctggcgt
      781 ttcgttgaaa agcgatgaga atatgttgcc gcctgatcta cgtggttacg caccgcaaat
      841 cacgggtgtt gcacaaacga atgcaaaggt cactgtctca cagaacaacc gtattattta
      901 tcaagaaaat gttcctcctg gcccatttgc tattactaat ttattcaata cattacaggg
      961 gcaactggac gtcaaggttg aagaagagga cgggcaagtc acgcaatggc aagttgcatc
     1021 taatagtatt ccttatctga cgcgtaaagg gcagattcgc tacaccactg ctatgggtaa
     1081 accgaccagc gttggtggtg attccttaca acaacccttc ttctggactg gtgaattctc
     1141 atggggttgg ctgaacaatg tatccctgca tggtggttca gttttaacaa accgtgatta
     1201 tcaatctctg gctgccggcg ttggctttaa ccttaactca ttgggttcat tatcttttga
     1261 tgtcacacga tctgatactc agttgcataa tcaggataaa gaaacgggtt atagctaccg
     1321 cgctaactat tcaaaacgtt ttgaatctac cggtagccag ctcactttcg ctggttaccg
     1381 tttctctgat aaaaactttg tgacaatgaa tgaatatatc aatgacacta accattacac
     1441 gaatt
//
LOCUS       DAJVUK010000305         1344 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.310, whole genome shotgun sequence.
ACCESSION   DAJVUK010000305 DAJVUK010000000
VERSION     DAJVUK010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.310"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            87..1006
                     /locus_tag="OQQ57_004285"
                     /pseudo
     CDS             87..1006
                     /locus_tag="OQQ57_004285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415843.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            1006..>1344
                     /locus_tag="OQQ57_004286"
     CDS             1006..>1344
                     /locus_tag="OQQ57_004286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1958788.1"
                     /translation="MKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCK
                     EQTSGNIYGKALAEKGYLVLAYDASFQGESGGEPRWIEDPTQRVEDISRVIDYAVTLP
                     YVNAERIGVLG"
BASE COUNT          381 a          302 c          326 g          335 t
ORIGIN      
        1 atttagggtc taatcaactt aatgatcaat atctatagtg atatcaccaa ccgttaaaac
       61 gaaccgacaa ctccatgagg aacggaatga tgaataataa agtcagcttc actaacagca
      121 ataatccaac catctctttg tctgcagtga tctatttccc tccaaaattt gatgaaaccc
      181 gtcagtatca ggcaattgtg gtatctcacc caggtggggc gttaaagaac aaacggccgg
      241 aacctatgcc aaaaaactgg cggaaaaggg atttgtcact attgcttatg acgcatctta
      301 tcaaggtgaa agtggcggcg agccgcgtca gttagaaaac ccatacattc gtactgaaga
      361 catcagtgcc gtgattgatt acctgacaac gctttcttat gtcgacaata cccgaattgg
      421 tgcgatggga atttgtgccg gtgcaggata tacagccaat gctgcaattc aggatcgccg
      481 catcaaggcc atcggtaccg ttagtgcggt caatattggt tcgatgttcc gtaatggttg
      541 ggaaaacaat gtgaaatcta ttgatgccct gccatacgtt gaagcgggtt caaacgcccg
      601 aaccagcgat attagcagcg gagaatatgc cgttatgcca ctggcaccaa tgaaggagtc
      661 cgatgcgccg aacgaagaac tgcgtcaggc ctgggagtat taccacaccc ctcgcgcgca
      721 gtatccaaca gcaccgggtt acgctacttt gcgcagcctt aaccagatta ttacctttga
      781 tgcttaccat atggcggaag tgtacctgac tcagccgatg cagattgtgg cgggcagcca
      841 ggcagggagc aaatggatga gtgacgatct gtacgatcga gcatcaagcc aagataaacg
      901 ctatcacatt gttgaaggcg caaaccatat ggatctttat gacggcaaag cctatgtggc
      961 tgaagcaatt tcagtattag ctccgttctt tgaggaaact ctgtaatgaa acatattcaa
     1021 atccgcaata gtgatatggc ctggcatatt gctgccaata ttcagtttcc accaaatttt
     1081 gatgagtcaa aacagtatcc ggcgattatc agcgtccatc cttttggcag ttgtaaggag
     1141 cagacgtctg gcaatatcta tggcaaagca ttggctgaaa aaggctatct cgttctcgct
     1201 tatgacgcca gtttccaggg agaatctggt ggggagcctc gctggataga agatccgaca
     1261 cagcgcgtag aggatattag ccgtgttatc gattatgcag taactctgcc atatgttaat
     1321 gctgaacgta ttggcgtgct ggga
//
LOCUS       DAJVUK010000306         1329 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.311, whole genome shotgun sequence.
ACCESSION   DAJVUK010000306 DAJVUK010000000
VERSION     DAJVUK010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.311"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(170..499)
                     /locus_tag="OQQ57_004287"
     CDS             complement(170..499)
                     /locus_tag="OQQ57_004287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HCS1958789.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(671..>1329)
                     /locus_tag="OQQ57_004288"
     CDS             complement(671..>1329)
                     /locus_tag="OQQ57_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1958790.1"
                     /translation="TGEIDTALWRSGDVLLGSLLAMLFTGIWPQRAFIHWRIQLAKSL
                     TEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQT
                     INRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPV
                     FANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK
                     "
BASE COUNT          326 a          311 c          312 g          380 t
ORIGIN      
        1 agtgcggtta ataacaatgg agttacagaa ctttttgcct tgctgcatac agaagatgtc
       61 tgtcgctaat ttcggtaagt tatcagatgg gaatgatgac ggtgatacac agaaaagaat
      121 caatgagcaa tgagggttgc caggcaaccc tcattgaata aaacaggaat tacttcgctt
      181 cgccgttttt catttcgccc atagctttca gctttttgga gatatcgcgg cgttctttgg
      241 agagctcggc atttttgatg atgtaatcgt caacgcgatc ttcatagtca cctttcatgc
      301 tggcgatgat gccctggatt gcttcaacgc tcatccccgg cttgatgtaa tcgctcaggt
      361 tgtccagcag caggacgcgc ttctggttgt cacggatctt tttctcaacg tcctgaattt
      421 cacgttgcag tttgttctta cgacggaaca gacgaacaaa ttccagtacg tcctggaatg
      481 aaggcttggt agtttccatt tttatacccc tgataatgtg agagtcggat tcgtttaagc
      541 aaccgctatc cgttagagcc aacattactc atagctgccg cagatgacaa tgcttttatc
      601 ccttttcact atcataccct ttatccttgc tgaatcgaag cagcagcaag atgattctgt
      661 agttcaggaa ttatttgcgc aaggcccggc aaatcagatt cgatagcaac tcaagctgat
      721 gtgccgtttc catgttcagc cacacataac catagattgg tgtttccaca accttcaggt
      781 catggtggtt attgagcaac tgacgcagct cttccactgc atcgttcaat ttttccgtat
      841 tggcaaaaac cggctgcgga ttaccttcgt acaacgcatg aacaaggctc agcagtattt
      901 gctgcatcat gtgctgggta tcacgaagtt tttgcgcgtt caataacacg aaatggctgg
      961 ggcgcgtggc ccagtacgca ttgatttgca actccagcat acaaaccaga ttgcggttaa
     1021 tggtctggat accttcatat atcgattttg gaatacgggt ttctttgctg gcgggcgcaa
     1081 tcagcccacg cattttcacg gcatcggtca ggagtttttg tagatggctt tccagacgtg
     1141 ggcgttcgag taagttcggt gagaatgcag attgatagac ccgattatac tcggtcagac
     1201 ttttcgccag ttgaatgcgc cagtggatga acgcccgttg tggccagata ccggtaaaca
     1261 acattgccag taaagagccg aggagcacat cgccgcttcg ccataacgcc gtatcaattt
     1321 cacctgtcg
//
LOCUS       DAJVUK010000307         1323 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.312, whole genome shotgun sequence.
ACCESSION   DAJVUK010000307 DAJVUK010000000
VERSION     DAJVUK010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.312"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..173)
                     /locus_tag="OQQ57_004289"
     CDS             complement(<1..173)
                     /locus_tag="OQQ57_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001544403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory CII family protein"
                     /protein_id="HCS1958791.1"
                     /translation="MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLN
                     PAQPHLLTAPEIWL"
     gene            complement(206..427)
                     /locus_tag="OQQ57_004290"
     CDS             complement(206..427)
                     /locus_tag="OQQ57_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HCS1958792.1"
                     /translation="MRPNISITLTTPHVTIERYSELTGLSIDTINDMLADGRLIRHRL
                     RKDKKREKVMINIAAMTVDALSECNLNLN"
     gene            553..1122
                     /locus_tag="OQQ57_004291"
     CDS             553..1122
                     /locus_tag="OQQ57_004291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein CI"
                     /protein_id="HCS1958793.1"
                     /translation="MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRD
                     SFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFD
                     KGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
                     EGGNRAFECKIEDIEIIGKIISLTVKYVR"
     gene            1138..>1323
                     /locus_tag="OQQ57_004292"
     CDS             1138..>1323
                     /locus_tag="OQQ57_004292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958794.1"
                     /translation="MLGKVFFVVLSCSLLLSPLTTYAKNYPCSGKKGGVSHCTSDGKF
                     VCNDGTISKSKKICTKNS"
BASE COUNT          394 a          238 c          298 g          393 t
ORIGIN      
        1 agccagattt ctggtgcggt taataaatga ggctgagctg ggttcagctt gttccgcaga
       61 atctgcacat tcatgcctgc acgttctgcc agttgcacca gattgtggcg cagtgcaaat
      121 gcacgacagg cttcatcaaa atgtggatgt ttggaaactt ggtaatcaaa catggtcaat
      181 gcctctgatg tatttcagaa tcgaactaat taaggtttag attgcattct gaaagcgcat
      241 caacggtcat tgctgctatg ttgatcatca ctttttcgcg ttttttatct ttgcgcagac
      301 ggtgacggat aaggcgtcca tcagccaaca tgtcattgat ggtatcgatg gatagccctg
      361 tcagctcgct atagcgttca atagtcacat gaggcgtggt aagagtgatt gaaatgttag
      421 gtctcatgat gcaacattcc tcgtttaatg atgattaatc aggacgaata cggatcgttt
      481 gtattttgtg aacaccataa acatatgatt gcacagtgaa atcgtcaaga taaaagttca
      541 cttggagtga ccatgaattt ggagaaaggc ggacgaggcg ccatagagcg catggtagaa
      601 gcttatggat tcaagactcg acaggcgttg tgcgatcatt taggaatctc taaaagtaca
      661 ctcgccacac gctacatgcg tgactcattc ccagcagaat gggtaatcca gtgcgccctt
      721 gaaacgggca cctcgcttaa ttggctcaca accggacatg gttcaaagca aacttcaggt
      781 aatacaaata ctatggaagt tgctaaatat gtattatctg atggtgcctt gcgtgaagac
      841 ggtttttata tttttgataa gggatttcta ccctctacgt ttaaaaaacc ttttgtcatc
      901 acagataaca attctgaatt tatttgtgat aaagaatttg atgacatacg tgatggtaaa
      961 tgggtaataa gtattgatgg cgaagtaacg atccgtgaca ttactcgttt acccggtgga
     1021 agaatcttcg tcgagggtgg aaacagagcc ttcgaatgta agatagaaga cattgaaata
     1081 attggtaaaa ttataagttt aacagttaaa tatgttagat aataccggga ggaaactatg
     1141 cttggtaaag tattttttgt ggttttatca tgctctttgt tattaagccc actaactacc
     1201 tatgctaaaa attatccttg ttctgggaaa aagggaggtg tctctcactg tacctccgat
     1261 ggaaaatttg tttgcaatga tggaactatt agtaaatcca aaaaaatctg tactaaaaac
     1321 tca
//
LOCUS       DAJVUK010000308         1277 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.313, whole genome shotgun sequence.
ACCESSION   DAJVUK010000308 DAJVUK010000000
VERSION     DAJVUK010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.313"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..706
                     /locus_tag="OQQ57_004293"
     CDS             <1..706
                     /locus_tag="OQQ57_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RHS domain-containing protein"
                     /protein_id="HCS1958795.1"
                     /translation="HRGLPLALISTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG
                     QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISEIDPQGLNPLI
                     LGVVALMSCGLFSSGGVIQSGQQRRDQYGRKVNPEADKLTDEHKSGVNPGGNCSPQNL
                     SDLQNEKNRLCNQSRACAPQMLRKEILRRYEINLACASVRKQINNQCFGGGDKAHMEE
                     ENKAYKTAADCSGLIK"
     gene            703..1206
                     /locus_tag="OQQ57_004294"
     CDS             703..1206
                     /locus_tag="OQQ57_004294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958796.1"
                     /translation="MKKIIFSNESAVYDELMIHFPCQPLPHISNDIIGLDELDVVYNF
                     FQKKQWNEIANNLKIKDDSYALELGITFLPEKVFCYYIPLYIYVSLFNKNDFWVFESD
                     FIQQYLCPEYRDYDDFLNFVFNFSDIQLSIIAQFMSYESDAGFFYASKACMDFWEDYS
                     PLLHKKI"
BASE COUNT          403 a          214 c          284 g          376 t
ORIGIN      
        1 ccatcgcggc ctgccgctgg cgcttatcag cacggaaggg gcaacagaat ggtgcgcaga
       61 atacgatgag tggggcaacc tgctgaatga agagaacccg caccagctgc agcagcttat
      121 ccgtttgccg gggcagcagt atgatgagga gtccggcctg tattacaacc gccaccgcta
      181 ttatgacccg ctgcaggggc gatatatcac tcaggaccca attgggctga aggggggatg
      241 gaatttttat cagtatccgt tgaatccgat ctcagagata gacccacaag ggttaaatcc
      301 gttaattctt ggtgttgtag cactgatgag ttgcggtttg ttttcatcag gtggtgttat
      361 ccaaagtggg caacaacgca gagatcaata tggacgtaaa gttaatccag aagccgacaa
      421 attaacagat gaacataagt caggtgtaaa tcctggaggt aactgtagtc cccagaacct
      481 gagtgactta caaaatgaaa aaaacagatt atgtaaccag tctagagctt gcgctcctca
      541 gatgctgaga aaagaaatat tgagacggta cgagataaat ttggcgtgcg cttcggtcag
      601 aaagcagatt aataatcagt gctttggtgg tggagataag gcccatatgg aagaagagaa
      661 taaagcatat aaaacagcag ctgattgcag tggcttaata aaatgaaaaa aataattttc
      721 tctaacgaga gtgcagtcta tgatgaactt atgattcatt ttccatgcca gccattacct
      781 catatttcaa atgatattat agggctggat gaactggatg ttgtatataa ttttttccaa
      841 aagaaacaat ggaatgaaat agccaataat ttaaaaataa aggatgactc ttatgcttta
      901 gagttaggaa ttacattcct ccctgagaaa gtattctgct attacatccc tctgtatatt
      961 tatgtctcgt tgtttaataa gaatgatttt tgggtttttg aatccgattt tattcaacaa
     1021 tatttatgtc ctgagtatcg ggattacgat gattttttga attttgtttt taatttttca
     1081 gatatacaac tatctattat tgcacagttt atgtcttatg aatcagacgc tggattcttt
     1141 tatgcaagta aagcttgtat ggatttttgg gaagattatt cacctctatt acataagaaa
     1201 atttaatcgt aaaaggtata aatggtttaa taaaaaactt gtctactcgt tggagtagat
     1261 gaaaaataag atgacgt
//
LOCUS       DAJVUK010000309         1263 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.314, whole genome shotgun sequence.
ACCESSION   DAJVUK010000309 DAJVUK010000000
VERSION     DAJVUK010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.314"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(47..886)
                     /locus_tag="OQQ57_004295"
     CDS             complement(47..886)
                     /locus_tag="OQQ57_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCS1958797.1"
                     /translation="MLNVAIENQNGWNYSAPAPHKTGAGISTPKVTRAHNRAEAVFLC
                     VMHSHIQIMVRRAGQPQGWPGSRVTGSANPVRLTTHEISTSAGELINLSLEDVIMATT
                     LSHPDVTIENGRAVTTSISIAEFFGKQHHHVVQKIESFECSELFLTSNFSRVKFEHRG
                     NSYNAYQITKNGFVFLVMGFTGKKAATFKEAYIAEFDRMEAELRQNNTPPADKMIPGD
                     GRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLL
                     SLK"
BASE COUNT          328 a          311 c          290 g          334 t
ORIGIN      
        1 tgtaaaacaa taatcaagca tggggttcat atccatagct ccatttttat tttaaggaaa
       61 gcaactgctc tacggtcatg tttttaattg cgccccggtt tacaagagtc cagccctgtt
      121 tttccagata aaaccggaaa gtctccaggg tacagaccag tgcgccatca ggaacggttt
      181 cggtgaattc gacattgccg aatttgtcga agtgaacaac cagagtgcga ccatcacccg
      241 gaatcatctt gtcagcaggt ggggtgttat tctggcgcag ttcggcctcc atgcggtcga
      301 actcagcaat gtaggcttcc ttgaatgtgg cggctttttt gcccgtgaag cccatcacca
      361 ggaaaacgaa gccgtttttg gtgatttggt aggcgttata agaattgccg cggtgttcga
      421 atttaacccg cgaaaagttg ctggttaaaa atagttcaga acattcgaag gattctattt
      481 tttgaacaac atggtgatgc tgcttgccaa aaaactcagc aatcgaaata gaagtagtga
      541 cggcgcgacc attttcgatg gttacgtcag ggtgagaaag ggtagtagcc ataatgacat
      601 cctcaagtga taagttaatt aactcaccag cagaggtgct aatctcatgg gtggtgagac
      661 gcacagggtt agcactaccg gtcactcgag aacccggcca gccttgcggc tgccccgcac
      721 gcctcaccat aatttgaatg tggctgtgca ttacgcataa aaaaaccgct tcagcgcggt
      781 tatgcgctcg agtaactttc ggggtgctaa tcccggcacc cgttttatga ggtgcaggtg
      841 cactataatt ccacccgttc tggttttcaa tagctacatt caacattttc tctttccttt
      901 catcaccgaa gtgaattttg tgatgcggtg cctagtgcct ccaggtgacg ttaaccagtt
      961 aacaattaca gtcggctttc ccacccaaac caataaggac taacatgact tttaactgtg
     1021 ccgcgtgcgc ttagccgcat tcaccgcatc acaaaattca ctttaaaaag ggcggacatc
     1081 agccagcaat taaaccgatg ccgccaactg gtacttcaca cagcaatgtc gttatttaca
     1141 accggaagcg cactcccacc atttaaattt cacagacaag accgactctt tatgaatacc
     1201 ggaaatgcgc cttcgtgttg tgcccggttt tatttcacca cctccgggct ttggtggcct
     1261 cgg
//
LOCUS       DAJVUK010000310         1251 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.315, whole genome shotgun sequence.
ACCESSION   DAJVUK010000310 DAJVUK010000000
VERSION     DAJVUK010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.315"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..1251)
                     /locus_tag="OQQ57_004296"
                     /pseudo
     CDS             complement(1..1251)
                     /locus_tag="OQQ57_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246439.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT          368 a          351 c          279 g          253 t
ORIGIN      
        1 aaacgcttca gttttcaacg caccccacag catcggccag aaaatgagtc ctgcaattgc
       61 ccctgtgcgc ataatagcgc gggcaaatcc gaccccagta gggcgaatag cgggaagata
      121 agagagtgtg gcaatggtca tgcccagccc accaggaccc gctgaatgga agaaaataat
      181 tgatcccaat aaccctaaag acagccaggg attagtcgtt gccagtgcgc ctaacgacag
      241 caatgctaag gtcacaacag caaatccata catcgactgt cggcgagtac ccagtcgttg
      301 gagaataaac gagccgatca tcccgcctgt caccccacaa agggcattca cgacggcaga
      361 accggtcaac gcgccagtaa gcccgccact tattattccc gccaacgtaa gaggaagata
      421 aacacctacg gcgttatatt gccacgcctg catggttgcc acgacacagc caagaatggt
      481 gcgtttgcgg taacgatcat taaataagat gccatatcca ccactgtatt tattctctgc
      541 tttttccgag aatttcgctt ctgttgtacc cgatgccgca acgcgagcct gaacaccata
      601 acgttttccc agaatgtcgc acgcttcctg gtaacgcccg acgcgtgcgg cccacattgc
      661 ggattcacca ataaagaagt aacgcaaaat catgaagatg actgcaaaaa tagctccgat
      721 gaatattccg taacgccaca attgttcttc agcgataccc gacagaagca gcggcaaaag
      781 taccaaataa acaacggttg tcgaaacata ccaggccatt tgccagaggt tgaccgacgt
      841 tccggttttc ttcgacgttg aaccacgaag ctctgccacg gcattggttg ccaaagggaa
      901 gtcgatgcct aaaccaaagc ccatgatgac gcggcacacc agcacccacc agatactggg
      961 agcaatagct accgctgcag caccgatggt gcacagcccc atgccaataa taaatgcccg
     1021 cttttgccca aagcggttta ttactcggtt cgctaataaa ccgccaatta acgcggcgat
     1081 taatactgat gcattgacgg ttgcagcaag acccggcgaa atgccgaatt gagcggcaat
     1141 gtatttatta ccaaacccca ccatcgccgc ctagtaggca tcaatcaata tgccgcccaa
     1201 agcaataaaa ataacgccga tactggtgtt gattgcagag ttcttattaa c
//
LOCUS       DAJVUK010000311         1210 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.316, whole genome shotgun sequence.
ACCESSION   DAJVUK010000311 DAJVUK010000000
VERSION     DAJVUK010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.316"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
BASE COUNT          370 a          209 c          237 g          394 t
ORIGIN      
        1 ttcaaaataa acgtttaata gggacaatca ccatttggat tgtccgctga ggaggcgaac
       61 gttttcctag acagctttat catgtcagcc cacattgttg gcgctgacaa tactaaggac
      121 aaacgatggg gaagtagctt tttagcgtta ttttcgggag taaaaaacat ggtatctttc
      181 cgtatgtcag ttgtatcttg ctggtattcg tagtcgtgat aaggcataca acgatattta
      241 tcttcacgtt agtgaagaat aagttgtttt gtgatctatg ttaatctggg attacaatcc
      301 gggcttgata catcgcatca cgacttttat tctcttcaga atagaatatg ttactccccg
      361 ttttacaggc tcaggatttg aattacaaat tatactttta agtgaacaat aactaggggt
      421 atttcttatt tcctgaaacc aggcttggcc catttcggga tgagtttgaa aaaactcttg
      481 acgcatacga tagtgatgaa ataaacgaaa caaattacgt caacaaactc aggcgtcttg
      541 cctgacatgc tcctgacatc attgatattc acgctcatct ggcatatgca tttgcgctct
      601 ttatgctgca attctggcga atgttcattt acagcgtcat caggatgccg ttatactcat
      661 tgataaaata ctaacatata accctgagaa taatcagggg acacgctggt tactggggac
      721 ggaattgtta cgtgctggca agcatgacag ggctctgtac gtattgacag gacatgtcaa
      781 tgaatttccc ccctactggt acgagcttgc tcttttacat tttatgaatg aggcatatat
      841 taatgctgca acggcatttc gatatggatt tttaacaagc atatattgtt gaaatgcttt
      901 gttagaatct ttatccattc cctggggctg tatagtatga tttttcaggt atttctgaat
      961 acagccaaat attattgcaa aatattctct aaattattag ttaaatatcc ataagcatta
     1021 ttgcctggga actggacata taattactct tctgtgctaa aggaacgttc tgaaatgttt
     1081 aagtatgcag agatgttgat ggcggaagaa gataataaag tatgtgaact tatttttaaa
     1141 caacaagata atttgatttt aaaaataaat gatagatttc ccagaataat tataaagaaa
     1201 taccgaacat
//
LOCUS       DAJVUK010000312         1198 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.317, whole genome shotgun sequence.
ACCESSION   DAJVUK010000312 DAJVUK010000000
VERSION     DAJVUK010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.317"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            59..1069
                     /locus_tag="OQQ57_004297"
     CDS             59..1069
                     /locus_tag="OQQ57_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HCS1958798.1"
                     /translation="MDKITQVLFSDIGKVTTQYVEVPHQELKPHEVRIAPVFYGICGS
                     DLHVLKGGHPFAKPPVVPGHEIAARVTEVGSDVKNVQPGDHVVVDPIMACMECRACKA
                     GRFNLCEPPQVASFRAPGFARSQHIVPARNCHVAPASLPLKVLAFAEPAACARHCVNR
                     MPKASLESVLVIGAGTIGLSIVQALRIMGAGKITVIEPDAAKRALALKLGAAEVWAPG
                     ELAADVRFTGAIDVVAAQATLNDACTRVYAGGTVVCMGVPSGPREIPLPMMQRFERDL
                     LNSGMYIPEDFDAVIEWLADGRFDTSELVTDLFAIEDAAAAFERAQQNDSIKVMLQFA
                     PE"
BASE COUNT          283 a          294 c          324 g          297 t
ORIGIN      
        1 tcgatgaagg tatcgcgcaa cgctaatccc ctatggatat cgattctgga gaataacaat
       61 ggataaaatt acccaggttt tattttcaga tattgggaaa gtcaccactc aatatgttga
      121 agtaccacac caggaactta aaccgcacga agtgcggatt gcgcctgtgt tctatgggat
      181 atgcggttcg gatctgcatg ttctgaaagg cggtcatccg tttgccaaac cacctgtcgt
      241 ccccggtcat gaaattgcag cgcgcgttac ggaagttggc agcgacgtta aaaatgtaca
      301 gccgggcgat catgttgtgg tcgatcccat catggcttgc atggaatgcc gagcctgcaa
      361 agcaggacgt tttaatcttt gtgaaccacc gcaggttgct agttttcgcg caccgggctt
      421 tgctcgctca caacacattg ttcctgcgcg taattgccat gtcgcaccag cctctttacc
      481 gctaaaagtg ttggcctttg ccgaaccggc ggcttgtgcc cgtcactgcg ttaaccgaat
      541 gccgaaagct tctctggaaa gcgtactggt aattggtgcc ggaacgatag gcttatccat
      601 cgtgcaggca ctgcgcatta tgggggcagg taagattacc gtgattgaac ctgacgctgc
      661 caaacgcgcg ctggcgttaa agctgggcgc agcagaagtt tgggcaccag gtgagctggc
      721 cgcagatgtg cgatttacgg gggcgattga tgtcgttgca gcgcaggcca cgcttaacga
      781 tgcatgtacc cgtgtatatg ccggaggcac cgtcgtgtgc atgggcgtac caagtgggcc
      841 gcgtgaaata ccattaccga tgatgcaacg tttcgagcgt gacttgctca actctggcat
      901 gtacatccct gaagatttcg atgctgttat cgaatggctg gcggatgggc ggtttgatac
      961 cagtgaactg gttaccgatt tatttgccat tgaggatgca gcggcggcat ttgaacgcgc
     1021 gcagcaaaat gactccataa aggtcatgct gcaatttgcg ccggaatgat tttctaaatc
     1081 tctgtctggc gctgcgtcac gtcagcgcca ccctacaaca attaaaaagg acactgcgat
     1141 gagtcaaatc accagtcctg caacttattc aattagtcgg ccacaggacg taattgat
//
LOCUS       DAJVUK010000313         1186 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.318, whole genome shotgun sequence.
ACCESSION   DAJVUK010000313 DAJVUK010000000
VERSION     DAJVUK010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.318"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..793
                     /gene="pocR"
                     /locus_tag="OQQ57_004298"
     CDS             <1..793
                     /gene="pocR"
                     /locus_tag="OQQ57_004298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="regulatory protein PocR"
                     /protein_id="HCS1958799.1"
                     /translation="NFTPFCQMMRQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAG
                     LTDFSIPLVIAGHLVGFVLCGQVRLRNDYVDLVDILNVDDCWQADPELLNEFRKVPEM
                     DYSRVMASADLLKLIVENCLKKQLNFVVIKENKSQSDSVRQTRAPSPHDNKMKKALRY
                     IDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYHGIGFNAWVNQQRMASARELLCHSDW
                     SIASIARNLGFSQTSYFCKVFRQTYQVTPQVYRQQVSENAAMETV"
     regulatory      882..1057
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          325 a          249 c          295 g          317 t
ORIGIN      
        1 taacttcact ccattttgtc agatgatgcg gcaacaccct cagctaagca ctcgatgtcg
       61 catgagcgat cgttgtgggg gcctggaagc ctctaaatcc gatcagcctt gtatttatcg
      121 ctgtcatgcc ggattaaccg atttctctat tccactggta atcgccgggc atttagtcgg
      181 ttttgtattg tgcgggcaag ttcgtctgcg taatgattat gtcgatttgg tcgatattct
      241 gaatgtcgat gattgctggc aggcagatcc cgaattactt aatgaatttc gcaaagttcc
      301 tgagatggat tactcaagag ttatggcctc tgctgatttg ttgaagttga ttgtagaaaa
      361 ttgcctcaaa aaacaactca attttgtggt tattaaagag aacaaatctc agtcagattc
      421 ggtgcgccag actcgtgcgc ctagtcccca cgacaataaa atgaaaaaag ctttacgcta
      481 tattgatgcg catttatcag acgatttgcg tctggaagat gtcgcctcgc acgtttatct
      541 aagcccttat tatttcagta agttattcaa gaaataccat ggaatcgggt ttaatgcgtg
      601 ggtaaaccaa caacggatgg ccagcgcgcg tgagttactg tgccatagtg actggagcat
      661 cgccagcatt gcgcgtaatt taggtttttc gcaaaccagt tatttttgca aagttttccg
      721 tcagacttat caggttacgc cgcaggtgta tcgacagcaa gtgagtgaaa atgcggcgat
      781 ggaaacggta tagagtaaat gctaaaaaaa gggaaggttt aaataaacgc tggaatgaat
      841 aattaacgtt atttacgtgt tatgggaaaa gtaaaatcag ctcataacat acgctgacag
      901 gtgtggcaca tttgtgcctg ggaagagagt gaaaatccct cgcagccccc gctgctgtaa
      961 tgctgacaaa cccgaaaatg ccactgatcg cgagattggg aaggtcggga gaggatgacg
     1021 ctaagccaga agaccagcca gtcagtcaat accaacaact tcggtgggaa gtgggttgcc
     1081 cggaagcgtc cggtagagta caggcgcgtc tttatacccc taccaccctg aaaggatcag
     1141 ggtatggcgg catcatttag ttctttcatc gcagtgccga caggca
//
LOCUS       DAJVUK010000314         1156 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.319, whole genome shotgun sequence.
ACCESSION   DAJVUK010000314 DAJVUK010000000
VERSION     DAJVUK010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.319"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..264)
                     /locus_tag="OQQ57_004299"
                     /pseudo
     CDS             complement(1..264)
                     /locus_tag="OQQ57_004299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(379..1017)
                     /gene="ospI"
                     /locus_tag="OQQ57_004300"
     CDS             complement(379..1017)
                     /gene="ospI"
                     /locus_tag="OQQ57_004300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspI"
                     /protein_id="HCS1958800.1"
                     /translation="MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSE
                     LAATLQKMINPSGGDGNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRHLEQI
                     DSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD
                     VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC"
BASE COUNT          338 a          285 c          176 g          357 t
ORIGIN      
        1 cagcaagcgc tgtaactctt ttatttgttt tatagcggca gccagttctg aggcaggaac
       61 gacatcctct ccggcagcaa cagcagtgag acttccttcc agatattatt ttttccactt
      121 aagcaacagg ctgggctgaa taccatgcaa acgcgccaca tgggacaccg tcatgccagg
      181 ctccattgtc tgctgaataa tggcaatttt ttcctgagga gttttacgtt tacgaagctc
      241 cagccccagc aaagttccag tcatctcaaa attagaacta gtgttagaca tatatccaag
      301 cctatctctt attttaagat acatccactg tctggcgttt caaggggccg gctcaaatct
      361 atgtacaggc tctcagcatc agcaaagcct cttactcttc caactactac tgttagcata
      421 gtgatcaaat tcctgatcag atacatgaat tacctgaacc gaactatttt catctacaaa
      481 tgcatctggc gatttttcta caggatcata aagattaaat ccctttcctg tttgaacatc
      541 caaaaacata attttttcac catcgttaaa tccagctatc caatgagtgg cctgttcaat
      601 agaaatcatt actacacttc cttttgaagt gttttgtaaa atattttctg caatacgctc
      661 acgaaattta ctataagttt cattaggatg tgacactatg ccttcactat caatttgctc
      721 taaatgccta tgaaaaaatc cggtcatata ctctgatatt tcattaggta cgggagcctc
      781 tcttactcca taccctaaca tagccataca agcatgaagc gcacaccctg aacagttacc
      841 atccccacca gacggattta tcattttctg taaagtcgct gccaattcag aatctttatc
      901 catatcacca agacttttag agtttaaaga ttccagcaat tttttaacat ttacatttcc
      961 ctcctctgta tgtgcctcat atccagcagt tccctgtaac gacaccccat taatcatatt
     1021 gtatcctgac agtatatata ctcactatat tttcttcata acaaatatcc ctctgatatg
     1081 acaacaaaaa acggagccgg attcctgttt ttgtgaactg cagctattcg agtctaaaaa
     1141 gtgatccact taccac
//
LOCUS       DAJVUK010000315         1110 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.320, whole genome shotgun sequence.
ACCESSION   DAJVUK010000315 DAJVUK010000000
VERSION     DAJVUK010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.320"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(1..483)
                     /locus_tag="OQQ57_004301"
     CDS             complement(1..483)
                     /locus_tag="OQQ57_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1958801.1"
                     /translation="MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNAS
                     RTFVICLEDTLRVVGYYSLATGSVTHAELGRSLRHNMPNPVPVVLLGRLAVDVCIQGH
                     GFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAFYERFGFVQSVVAPNTLFYKV
                     "
     gene            complement(474..776)
                     /locus_tag="OQQ57_004302"
     CDS             complement(474..776)
                     /locus_tag="OQQ57_004302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCS1958802.1"
                     /translation="MEVFMSTAASVRKTPREHQINIRATDEERAVIDYAASLVNKNRT
                     DFIMELAYQEAKNIILDQRLFVLDNERYDSFITQLEAPVQNAEGRERLMAVKPEWK"
BASE COUNT          338 a          273 c          233 g          266 t
ORIGIN      
        1 tcagacttta taaaacaagg tattaggtgc cacaactgac tgaacaaaac caaaacgctc
       61 ataaaatgct ctggcgtcat catcaattgc atgtaccata acagccttaa tgccaacctg
      121 atcagccaga ttgacaaccc ggtgaatggc atcacttagt agccatttac cgaaaccatg
      181 cccctggata caaacatcaa cagccagacg ccctaacaga acaacaggga caggattggg
      241 catgttatgc cgcaaactgc gaccaagctc ggcatgagtg acggaaccag tagctaatga
      301 gtagtatccc acaacacgta aagtatcctc caagcaaata acgaacgtgc gagaagcatt
      361 gagcatctgg tttttcatag cccgaccacg taaccagtta cttagcacct catttccaca
      421 gtcaaatggc tgaagtatat gctcatccgt caacaatgct ggcgcggtga catttatttc
      481 cattcaggct ttaccgccat cagacgttca cgcccttctg cattctgcac aggagcttcc
      541 agttgcgtaa taaacgaatc ataacgttcg ttatccagca caaataaacg ttgatccagg
      601 ataatgtttt tagcttcctg gtacgccagt tccatgatga aatcggtacg gttcttattg
      661 accaagctcg cagcataatc aataacggct cgttcctcat cagttgcccg gatgttaatc
      721 tgatgttctc gcggtgtttt acggacgctt gcagctgtag acataaaaac ctccattggt
      781 aacaatttgc tatgcaatta atgttatcgc aaatggtaac agaacgctat acagaatcac
      841 ttacgggaaa agcgatcccc tgataaaaac aatggcagag acctgaacat tgtgacgatg
      901 atctgtgtcg gcgcacaaat catgtctgat tacggccgtt taatgtgatt ttgataatga
      961 aatgcctgaa ccacggcagc ctggcggctg caaatcgggg tgtggcagaa tatgagcttt
     1021 cagagtaacc atccagaatg agttcccatg tcacacaacc tggagcacca gaaagtccac
     1081 accagaatgg tgaaagaggt tctgaaagcc
//
LOCUS       DAJVUK010000316         1104 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.321, whole genome shotgun sequence.
ACCESSION   DAJVUK010000316 DAJVUK010000000
VERSION     DAJVUK010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.321"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>1104
                     /gene="rhsC"
                     /locus_tag="OQQ57_004303"
     CDS             <1..>1104
                     /gene="rhsC"
                     /locus_tag="OQQ57_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhs element protein RhsC"
                     /protein_id="HCS1958803.1"
                     /translation="CPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYR
                     TKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLW
                     LVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEV
                     LPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAGRHFQLVLTTQAQRA
                     EEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRY
                     GWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLN
                     PAGLSYTYQYEKDRITITDSLNRREVLHTQGEAG"
BASE COUNT          213 a          346 c          361 g          184 t
ORIGIN      
        1 gtgccccggc ggggtgacgt ccggccatcc ggtcaatccg ctgctcggtg caaaggtcct
       61 tcccggtgaa accgacatcg ccctgcccgg cccgctgccg ttcatcctct cccgcaccta
      121 cagcagttac cggacaaaaa cgcccgcgcc ggtggggagc ctcggccccg gctggaaaat
      181 gcctgcggat atccgcttac agctgcgcga taacacactg atactcagtg ataacggcgg
      241 cagaagcctg tattttgagc acctgtttcc cggtgaggac ggttacagcc gcagcgagtc
      301 actgtggctg gtgcgcggcg gcgtggcgaa actggatgaa ggtcaccggc tggccgcact
      361 ctggcaggcg ctgccggaag aactccgctt aagtccgcat cgttatctgg cgacaaacag
      421 tccgcagggg ccgtggtggc tgctcggctg gtgtgagcgg gtgccggaag cggatgaggt
      481 gctgcctgcg ccgctgccgc cgtaccgggt actgaccggg ctggtggacc gcttcgggcg
      541 cacacagacg ttccaccgcg aagccgccgg tgaattcagc ggcgaaatca ccggcgtgac
      601 ggatggtgcc gggcgtcact tccaactggt actgaccacg caggcgcagc gggcagaaga
      661 agcccggcag caggccattt ccggcgggac ggaaccgtcc gcttttcctg ataccctgcc
      721 gggttacacc gaatatggcc gggacaacgg catccgtctg tctgccgtgt ggctgacgca
      781 cgacccggaa tacccggaga atttacctgc cgcgccgctg gtgcgctatg gctggacgcc
      841 gcgcggcgaa ctggcggcag tgtatgaccg cagcaataca caggtgcgta gctttactta
      901 cgatgataaa taccggggcc ggatggtggc gcaccgtcac acgggccggc cggaaatccg
      961 ttaccgttac gacagcgacg ggcgggtgac agaacagctt aacccggcag gcttaagcta
     1021 cacgtatcag tatgagaagg accgcatcac catcaccgac agcctgaacc gccgtgaagt
     1081 gctgcacacg cagggtgaag ccgg
//
LOCUS       DAJVUK010000317         1056 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.322, whole genome shotgun sequence.
ACCESSION   DAJVUK010000317 DAJVUK010000000
VERSION     DAJVUK010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.322"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(162..428)
                     /locus_tag="OQQ57_004304"
     CDS             complement(162..428)
                     /locus_tag="OQQ57_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958804.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPATNRTKTLKFTATEMQWLTKINEVGIVEKQSQRHSNI"
     gene            complement(610..1008)
                     /locus_tag="OQQ57_004305"
                     /pseudo
     CDS             complement(610..1008)
                     /locus_tag="OQQ57_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612066.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          269 a          216 c          217 g          354 t
ORIGIN      
        1 tgaatatatc acgataacgt tcagtatgta tcgaggatag atggagttac tcctctctga
       61 aatagaatta ctgctctact ttttctgttt ccagaaatta ttagtaacaa accctgatat
      121 attcttttga aaatggagct taaacgagtc tgaaattaac ttcagatatt agaatgccgt
      181 tggctttgtt tttcaacaat tcctacttca tttatctttg tcaaccattg catttctgta
      241 gcagtgaatt tcaacgtttt cgtccggttg gtagcaggta tttgtaattc gtatatagct
      301 gcttttttat tgaaaacagt atatccatct gtagtaacag tagaagataa taatacagga
      361 tttgacactt caaggatgat attttcttgt ttttgtggaa ggcaagggaa tatagtttgt
      421 gtaagcatat tgcttcctta tgttatattt tagtaaagaa tttatttttt acattatagt
      481 cggctaaatg aagtttactg taaaaaaacg atactttttt cgtaagcgat gagatgtgga
      541 gccagaaaaa tggctgcgtt acgtcattga actgtccttg acccacgata ttcagacagt
      601 cgttgtatct taagttgaca ttacccgctg acgtcgatat tcccttggtg agagataacc
      661 caacgcacta tgcggatggt tttcattgta atgctcgatc gccactgcaa ggttatgcaa
      721 tgccgttctt ggtttcggca tgaacgcgat gcagtcttcc ttcatcgttt tcacgaaccg
      781 ttctgctatt ccattactct gagggctact gactgccgtc gtgcagggct ccagattcaa
      841 ctctctggcg aactgccgtg tttcatgagc cgtataagcc gaaccgttat cggccactgg
      901 attggccgtt ccggtccttt atcgccatat cgctgacatg acatcctgca ccgttgcttt
      961 gtcataatct cccgtgcctg ctgcccagtc tatggcttca cgatcgcaat atggaacgta
     1021 acgctgtcat cgggagaatc gtcaatgcgg cattcg
//
LOCUS       DAJVUK010000318         1050 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.323, whole genome shotgun sequence.
ACCESSION   DAJVUK010000318 DAJVUK010000000
VERSION     DAJVUK010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.323"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            264..1050
                     /locus_tag="OQQ57_004306"
                     /pseudo
     CDS             264..1050
                     /locus_tag="OQQ57_004306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
BASE COUNT          309 a          240 c          246 g          255 t
ORIGIN      
        1 acccttttgc ttttatatct gcgtctaaaa taaaaatgag ccgcaggtta accgcaaaag
       61 ttacatgctc acatagcaaa aagaatagcc aacttcatta tggcttcagt gagatgtatg
      121 gtcgtaggat ttcatacatt gacactggtt atacatacag taaaaatact ctctactgga
      181 gggcattttt tatggcagta cgaaaactca ccactgggaa atggctttgc gaatgttacc
      241 ccgccggacg aagtgggcgt cgtgtgcgta aacaattcgc caccaaaggc gaagcactgg
      301 cttttgagcg ccacacgatg gaagaaaccg aagcaaagcc ctggctgggt gaatcagtgg
      361 atcgtcgaac actgaaagac gtggttgagc tatggttcaa actacatggt aaatctctga
      421 cagctgggca gcatgtctat gacaaattgc tgttgatggt tgacgctctg ggcaatcctc
      481 ttgcaaccga tctcacctct aaaatgtttg cccactatcg agataaacgc ctgacaggcg
      541 ggatctactt cagcgagaaa tggaagaaag gagcaagccc ggtcaccatt aacctggagc
      601 aaagctatct aagtagtgtt tttagcgaac tatcccgtct gggcgaatgg tcgtatccga
      661 acccactgga gaacatgcga aaattcacca tcgcagaaaa agagatggca tggcttaccc
      721 atgagcagat tgttgaattg ctggctgatt gcaaacgtca ggacccaatt ctggcactgg
      781 tagttaagat atgcttaagc acaggcgcac gctagcgtga agccgtaaat cttacccgct
      841 cacaggtgac caaataccga attacctttg tcagaacgaa ggggaagaaa aacagaagca
      901 tccctatcag taaagagctt tacgaagaga tcatggcgct tgatgggttc aatttcttca
      961 cagactgcta ttttcaattt ttatccgtga tggaaaaaac gtctatcgtg ctccctcgcg
     1021 gtcaactcac acacgttctg cgccatacgt
//
LOCUS       DAJVUK010000319         1044 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.324, whole genome shotgun sequence.
ACCESSION   DAJVUK010000319 DAJVUK010000000
VERSION     DAJVUK010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.324"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..876
                     /gene="lpxM"
                     /locus_tag="OQQ57_004307"
                     /gene_synonym="msbB"
     CDS             <1..876
                     /gene="lpxM"
                     /locus_tag="OQQ57_004307"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HCS1958805.1"
                     /translation="TWFLLGMIAGISMFPPSFRDPVLAKIGRWAGRLSKKARRRATIN
                     LSLCFPEKSDTEREIIVDKMFATALQSIVMMAELAIRGPEKFQKRVFWKGLEILEEIR
                     YNNRNVIFLVPHGWSVDIPAMLLAAQGEKMAAMFHQQRNPVIDYVWNSVRRKFGGRLH
                     SREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFADFFATYKATLPIIGRLMNISQAM
                     IIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMIARQMNKTVEILVGSHPEQYIWVL
                     KLLKTRKSNEADPYP"
BASE COUNT          298 a          209 c          247 g          290 t
ORIGIN      
        1 acatggttcc ttttgggaat gattgcaggt atttcaatgt ttcccccttc attcagagat
       61 cctgtcttgg caaaaatagg gcgttgggcg ggcagattga gcaaaaaagc tcgtcgcagg
      121 gcgacgatta atttatcgct ttgtttccca gaaaagagtg atacagaacg ggaaataatt
      181 gtcgacaaaa tgtttgccac agcattgcaa tccatagtga tgatggcaga actggcaatt
      241 cgtggtccgg aaaagttcca gaaacgagtg ttctggaaag gcctcgaaat tcttgaggaa
      301 attcgataca ataacagaaa tgtgattttt ctggttcccc atggctggag cgtggatatt
      361 cctgcaatgt tgctggcagc tcagggggaa aaaatggccg ccatgtttca tcagcaacga
      421 aatccagtga ttgattatgt ctggaattct gtacggcgta aattcggggg gcgcttacat
      481 tcccgggagg atgggataaa accatttatt cagtcagtac gccagggata ctgggggtat
      541 taccttccag atcaggatca tggtcctgaa tacagtgaat ttgctgattt ttttgcgacc
      601 tataaagcga cattaccaat tattggacgt ctgatgaaca tcagtcaggc tatgattata
      661 ccgcttttcc cggtttatga tgaaaaaaaa catttcctga ctattgaagt tcggccacca
      721 atggatgcat gcattgccag cgcggacaat aaaatgattg cccgacaaat gaacaaaaca
      781 gtggaaattt tggtggggtc acatccggaa cagtatatct gggttttaaa attgttaaaa
      841 acgcgcaaat caaacgaagc ggacccgtac ccttgaaatt ataaagtaca ggtatttcca
      901 ctagttgttt cttacaggtt accaatcgaa acacatcccc cttccgtgtg ttgcccgttt
      961 ggcacggagg actgtgtaga tgcagttcgt taaatttaat ttatgcctaa atagctgcgc
     1021 ttaataccgc tacacttttg ccag
//
LOCUS       DAJVUK010000320         1017 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.325, whole genome shotgun sequence.
ACCESSION   DAJVUK010000320 DAJVUK010000000
VERSION     DAJVUK010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.325"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..692)
                     /gene="ospC4"
                     /locus_tag="OQQ57_004308"
     CDS             complement(<1..692)
                     /gene="ospC4"
                     /locus_tag="OQQ57_004308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC4"
                     /protein_id="HCS1958806.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKTNPNKATKALQKNILRVTNSSS
                     SGISEKHLDHCANTVKNFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYISEIIQKVHPLSSDERHLLSIIINSNFNFRHQSNSNLSNNILNIKSFD
                     KIQSENIQTHKNTYSEDIKEISNHDFVFFGVEISNHQEKLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLT"
BASE COUNT          301 a          161 c          183 g          372 t
ORIGIN      
        1 tcggttaatg tcatatatcc atatggagag tcatgatcaa tgatatacgc attggcgcca
       61 aaatctacag tatgatgtgt tttatttagc gggagttttt cttgatgatt ggaaatttca
      121 accccaaaaa aaacaaaatc gtggttagag atttctttaa tatcctcaga gtatgtattc
      181 ttatgtgttt gtatattttc agactgaatt ttatcaaagg atttaatatt aagaatatta
      241 tttgacagat tagagttact ttgatgtctg aagttaaaat tagaattaat aataatagaa
      301 agtaagtgac gttcgtctga agaaagagga tgaacttttt gtattatctc agagatatag
      361 tgcctggaca ccttatcgag atgctcaagt gaccgaaatg atgaccgtgc tccagatggc
      421 gcttcaatag aaagatttag tgatttgaaa ctggtccctt gagaaaacat tttgctataa
      481 ctttgcgctg ctatagactt ccttaaaaag tttttcacag tattagcaca gtgatctaaa
      541 tgtttttcac ttatgccaga agaagatgag tttgttacgc gtaatatatt tttttgtaat
      601 gcttttgttg ctttattcgg attcgttttt ccatcaacaa gatcaatatt attctgaaca
      661 ttaatatgat ttactgcttc aggtattttc atcccccccc caattatgtg cgtttttatc
      721 tgtggttatt tagataacat tatctaactg gacactttct tgtatgtatt atagctaaat
      781 gaacagattt taatatgttg tatggttttc actctgaaat cccctgaatt taatcacgtt
      841 tcctttactg aaggcaattt taaccgtagt atcaattatt aacccttggg cttgatatcc
      901 ctctcctctt ctgggcacgg gggatgtcag attacttatt acagaaacca aaagaattgt
      961 aagcgtcatc tcagtgtcgt ctatttcaat gtctgatgat tggcgatgat agagtcc
//
LOCUS       DAJVUK010000321         1009 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.326, whole genome shotgun sequence.
ACCESSION   DAJVUK010000321 DAJVUK010000000
VERSION     DAJVUK010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.326"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            201..395
                     /gene="bfd"
                     /locus_tag="OQQ57_004309"
     CDS             201..395
                     /gene="bfd"
                     /locus_tag="OQQ57_004309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HCS1958807.1"
                     /translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELMQMPEFKEIA"
     gene            468..944
                     /gene="bfr"
                     /locus_tag="OQQ57_004310"
     CDS             468..944
                     /gene="bfr"
                     /locus_tag="OQQ57_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HCS1958808.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
                     YHESIDEMKHADKYIERILFLEGTPNLQDLGKLGIGEDVEEMLQSDLRLEQEGAKDLR
                     EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
     gene            complement(941..>1009)
                     /locus_tag="OQQ57_004311"
     CDS             complement(941..>1009)
                     /locus_tag="OQQ57_004311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HCS1958809.1"
                     /translation="PFGPFLAAAGFVIGWDSLLIGR"
BASE COUNT          302 a          205 c          231 g          271 t
ORIGIN      
        1 gctaaagttc tgggttaatt acacgttaat tagttttgaa ttgaaaaggg cgcttcggcg
       61 ccctttttgc tgcccgtaat ttgagctcga aatatttagt cgtaattttg ctcgctgaac
      121 tatggcgcaa ataaaactgt gctattgtaa tcataatcat tctcatttac actttgcgca
      181 gaatttgaac gggagcaatc atgtacgttt gtttgtgtaa tggtgtaagt gacaaaaaaa
      241 ttcgccaggc agtccgtcag tttcatccgc aatctttcca acaattgcgt aagtttattc
      301 ctgtgggaaa tcaatgcggt aagtgcattc gcgccgcgcg cgaagtgatg caggacgagt
      361 tgatgcagat gccagaattt aaagagattg cctgaagacc acgcttattt tttgacatcc
      421 cgctagcccc atctacgctc taatagtgga agcggaggga ctataaaatg aaaggtgatg
      481 ttaaaatcat aaattatctc aataaactat tgggaaatga gcttgtcgca atcaatcagt
      541 attttctcca tgcccggatg tttaaaaact ggggcctgat gcgtctcaat gacgtcgaat
      601 accatgaatc catcgatgag atgaaacacg ctgataaata tatcgagcgt attttgtttt
      661 tagaaggaac ccccaactta caggatttag gcaaactggg gattggtgaa gatgtcgagg
      721 agatgctgca atccgacctg cgattagaac aggaaggcgc gaaggatctg cgtgaggcta
      781 tcgcatatgc cgacagcgtt catgactatg ttagccgcga tatgatgatc gagatccttg
      841 ctgatgaaga aggtcatatc gactggctcg aaactgaact ggatctcatc ggtaaaattg
      901 gcctacaaaa ttacctgcaa tcacaaatta aagttaaaga ttaacggcct atcagcaaac
      961 tatcccagcc tataacgaaa cccgcagccg ccagaaatgg cccaaaagg
//
LOCUS       DAJVUK010000322          987 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.327, whole genome shotgun sequence.
ACCESSION   DAJVUK010000322 DAJVUK010000000
VERSION     DAJVUK010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.327"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..978
                     /locus_tag="OQQ57_004312"
     CDS             <1..978
                     /locus_tag="OQQ57_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HCS1958810.1"
                     /translation="CEHLPLYRQSEIFARQGVELSRALLSNLVDACCQLMTPLNDALY
                     RYVMNSRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQ
                     GKHPEQHLSPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKVHDVYISTKS
                     ATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKC
                     RLRDAFRYIRKHWVALCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERG
                     ALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVDELLPWNVALTNK"
BASE COUNT          248 a          244 c          285 g          210 t
ORIGIN      
        1 tgcgaacacc tgccactgta tcgtcagagt gaaatttttg cccgtcaggg tgtcgaactg
       61 agccgtgcat tactctccaa cttggttgac gcgtgctgcc agttaatgac gccgctgaat
      121 gatgctctgt accgttatgt aatgaacagc cgcaaagttc acactgatga cacaccagta
      181 aaagtgctgg caccgggcag gaagaaggcg aaaacaggat atatctggac gtatgtccgg
      241 gatgacagga atgccggttc gccagagcct ccggcggtct ggttcgccta ctcaccggac
      301 catcagggta aacatccgga gcagcacctt agtcccttcc ggggtatcct gcaggcagat
      361 gcgtttaatg gttacgatcg gctgttcagt gccgaacgag aaggcggcgc gttgacggaa
      421 gcaggatgct gggctcatgc gcggcgcaaa gtccacgatg tatatatcag taccaaaagc
      481 gcgacagcgg aagaagccct gaaactaatc ggtgagctgt acgccatcga gcacgaaata
      541 cgcgggttgc cggtgtctga acgcctggcg gtcaggcaaa tgcagagtaa accgctactg
      601 acttccctgt ataagctgat gcaggagaaa gaacacacgt tatcgaaaaa atgccgtctg
      661 agagatgcgt tccggtatat caggaagcac tgggttgcgt tgtgcaactt cagtgatgat
      721 ggtctggctg aggcggataa taatgccgcg gaaagagcgc ttcgtgcagt ctgtctcgga
      781 aagaaaaact ttatgttctt cggcagcgat cacggtggag agcgtggtgc gctactgtac
      841 gggctgatcg gcacctgccg actgaacggt atcgatccgg aagcgtatct gcgctatatc
      901 ctgagcgtac tgccggaatg gccttccaac cgtgttgacg aactcctgcc atggaacgta
      961 gcactcacca ataaataagc gtcaata
//
LOCUS       DAJVUK010000323          984 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.328, whole genome shotgun sequence.
ACCESSION   DAJVUK010000323 DAJVUK010000000
VERSION     DAJVUK010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.328"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            106..>984
                     /locus_tag="OQQ57_004313"
     CDS             106..>984
                     /locus_tag="OQQ57_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HCS1958811.1"
                     /translation="MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
                     DVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGD
                     FGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK
                     MAAIHKALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
                     LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLK
                     ENPKFRGIYQPVYSPWV"
BASE COUNT          262 a          255 c          269 g          198 t
ORIGIN      
        1 cctaaatagc tgcgcggaat agtagatccc tttgagggaa cttagcccgg attgtgcgat
       61 ctgatcaatc gccaaatcaa aacaaatcac caaccggact gagcaatgcc gatcatagca
      121 ccaatttccc gtgacgaacg acgcctgatg cagaaagcca tccataaaac acacgataaa
      181 aattatgccc gcagactgac tgccatgctg atgctgcacc ggggcgaccg tgtcagcgac
      241 gttgccagaa cgctctgctg cgcccgttcc tctgttggac gctggattaa ctggttcacg
      301 cagtcgggtg ttgagggact gaaatcatta cctgccgggc gtgcccgtcg ctggccgttt
      361 gagcatatct gcacactgtt acgtgagctg gtaaaacatt ctcccggcga ctttggctac
      421 cagcgttcac gctggagtac agaactgctg gcaataaaaa tcaatgagat aaccggttgc
      481 cagttaaatg ccggaaccgt tcgccgctgg ttgccgtctg cggggattgt gtggcgaagg
      541 gctgcgccaa ctctgcgtat ccgtgacccg cataaagatg aaaagatggc agcaatccat
      601 aaagcactgg acgaatgcag cgcagagcat ccggtctttt atgaagatga agtggatatc
      661 catcttcatc ccaaaatcgg tgcggactgg caactgcgcg gacagcaaaa acgggtggtc
      721 acgccgggac agaatgaaaa atattatctg gccggagcgc tgcacagcgg gacaggtaaa
      781 gtcagctatg tgggcggcaa cagcaaaagt tcggcgctgt tcatcagcct gctgaagcgg
      841 cttaaagcga cataccgtcg ggcgaaaacc atcacgctga tcgtggacaa ctacattatc
      901 cacaaaagcc gggaaacaca gagctggctg aaggagaacc cgaagttcag gggcatttat
      961 cagccggttt actcgccatg ggtg
//
LOCUS       DAJVUK010000324          956 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.329, whole genome shotgun sequence.
ACCESSION   DAJVUK010000324 DAJVUK010000000
VERSION     DAJVUK010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.329"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            333..569
                     /locus_tag="OQQ57_004314"
     CDS             333..569
                     /locus_tag="OQQ57_004314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HCS1958812.1"
                     /translation="MHQNSVTLDSAGAITRYFAKANWPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE"
     gene            612..884
                     /locus_tag="OQQ57_004315"
     CDS             612..884
                     /locus_tag="OQQ57_004315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HCS1958813.1"
                     /translation="MKTSDNERIKYEITGQVVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH"
BASE COUNT          331 a          152 c          192 g          281 t
ORIGIN      
        1 aaataagggt ggtaagcatt aacaatccag ggtaatgggt gaggcgagag taagacggta
       61 acagacatat cttcttgtgt ctttctttta ataccaaaac ataaccgttt ctttacattg
      121 ataaaaaatg gaaaaagttg aacactagtt ggcgaaaaat ctcgtataga ttgtcagtta
      181 aatgatgcaa tatgttttat cataacacat tgttttatat gtattggcac taattgcaaa
      241 aaattaattt atcattctgt acacatattt cgtacaagtt tgctattgtt acctcactta
      301 acattgatta acatttttaa cagaggcgta gcatgcatca aaattcagtg actttagatt
      361 ctgcgggagc aatcactcgt tactttgcaa aagctaactg gcctactcag caggaaactc
      421 tcggggaaat tgtgactgag attttgaaag atggacgtaa tctgagtcga aagtcgcttt
      481 gtgccaaact tctttgccga ctggaacacg cgactgggga agaggaacag aaacattata
      541 atgcactaat tgggttgctt tttgaataat gcaacagcct gattatttaa caggttagct
      601 atgaagtcgt tatgaagaca tctgataatg aacgtataaa atatgaaatt actggccagg
      661 tggtgctcca gatactgcgc atgaagataa atttttcatt gcagactctt attaagcaat
      721 tactcgtaat gaaatcggct gaggaagatg ctttccgacg cgatttaatt gacagcataa
      781 ttcgtgattt tagcaatagt gattcaggag ggccaaaccg aagaacagcg acagctgaca
      841 ataaaagtat gttcaatggt aagaaaataa acagaataca ttaaaatttc ataagtaaga
      901 tgagaggtta ccatgcttga agatactaca attcataatg caataactga taaagc
//
LOCUS       DAJVUK010000325          920 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.330, whole genome shotgun sequence.
ACCESSION   DAJVUK010000325 DAJVUK010000000
VERSION     DAJVUK010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.330"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..648
                     /gene="ospC4"
                     /locus_tag="OQQ57_004316"
     CDS             <1..648
                     /gene="ospC4"
                     /locus_tag="OQQ57_004316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC4"
                     /protein_id="HCS1958814.1"
                     /translation="KTDVPIFNTKDMRLGIGLHLIDFIRKSKDQGFREFCYNKNIDPV
                     SLDRIINFVFQLEYHIPRMLSTDNFKKIKLRDISLEDAIKASNYEEINNKVTDKKMAH
                     QALAYSLGNKKADIALYLLSKFNFTKQDVAEMEKMNNNRYCNLYDVEYLLSKDGANYK
                     VLEYFINNGLVDVNKKFQKANSGDTMLDNAMKSKNPKMIDFLLKNGAILGKRFEI"
BASE COUNT          326 a          141 c          179 g          274 t
ORIGIN      
        1 aaaactgatg ttccaatatt taacactaaa gatatgaggc ttggaattgg gttgcatctt
       61 attgatttta taagaaagag taaagatcaa ggattcagag agttttgtta taacaaaaat
      121 attgatcctg ttagtttgga tagaattata aactttgtgt ttcagcttga gtatcatata
      181 ccaagaatgc taagtacaga taacttcaaa aaaataaaac tcagagacat atctttggag
      241 gatgcgatta aagcatctaa ttatgaagag attaacaata aagtgactga taaaaaaatg
      301 gctcatcagg cccttgctta ttctttaggc aataaaaaag ctgatatagc actttattta
      361 ctatctaaat ttaattttac aaaacaagat gtcgcagaga tggagaaaat gaacaacaat
      421 agatattgta atctgtatga tgttgaatac ttacttagta aagatggtgc caactataaa
      481 gtgctagaat attttatcaa taatggattg gttgatgtaa acaaaaaatt tcaaaaagca
      541 aatagtgggg acactatgct tgacaatgca atgaaaagca aaaatccaaa aatgattgat
      601 tttttattaa aaaatggagc aatattaggc aaacgatttg agatatgacc taaaagctcg
      661 gccaaataat aatgtcgtcg attatcgaag tcatcatgag tgattctgtc cccacagtgc
      721 agcatcagca tgacagtgaa ttgtctggcg tggtccattt aatgagatgg agatggtccc
      781 tctttcctaa atagctgtgc ctaataccgc tacacttttg ccagcccatg tttgcctccg
      841 gggaatgggc tgacggttcc ttcaaaatcc attgcacgca gttatgtcgg agcgggaact
      901 tgactcctgt ctttacggga
//
LOCUS       DAJVUK010000326          920 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.331, whole genome shotgun sequence.
ACCESSION   DAJVUK010000326 DAJVUK010000000
VERSION     DAJVUK010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.331"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..>920)
                     /locus_tag="OQQ57_004317"
     CDS             complement(<1..>920)
                     /locus_tag="OQQ57_004317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HCS1958815.1"
                     /translation="RFSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLVGCVLTLSL
                     LVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFIST
                     KMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDT
                     AYCIKYAILAFLALLPFLAVAGYIIFEQILNAYDSSVYANDDIENLQQFMEMQRKMII
                     AQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISG
                     ITGGLAYPLLKIWMIDWQAKNTYLLGDLDDL"
BASE COUNT          353 a          207 c          141 g          219 t
ORIGIN      
        1 aggtcatcca aatcgcccag caaatacgta ttttttgcct gccagtcaat catccatatt
       61 ttcagcagtg gataagccag accgcccgta atcccggata tcactaccaa cgcacacatg
      121 cgataaagca taccgtggta cgttaaagtt gagcgaaaac gaatacgccc atcattcagt
      181 gacaggttac tcataaaatg atttcgcaac gacaccgtta aataactggt gctaacagca
      241 atcccaaaat aatagattaa ctgcgcgatt atcattttac gttgcatttc cataaattgc
      301 tgtaaattct caatatcatc atttgcatac acagaactat catacgcatt taatatttgt
      361 tcgaagataa tataaccagc aacagcgaga aaaggtaata aagctaaaaa tgcgaggatg
      421 gcatatttta tacaatacgc agtatctaat ttcaccttga aacgatgtat accgaaactg
      481 gtattgctcc agagaaaact cattaccagg ctatataaag taccattaaa aataccaatg
      541 gaaacaatac caactattgc catcagaacc acagatataa taacactact tgaactattg
      601 gcatgtagca tctttgtcga gataaagaaa acagtcccca tcccaatggc cattaaaatc
      661 ggcaagaaaa aggttaccca ccagaaccct ttcatagagc aattaaaact aaatcttacg
      721 ccgttgagac tagtcatcaa ggcctgataa cgcagtcctt ttgctgccat aaatataagc
      781 aaaaccaaca gtgacaaagt caaaacacag ccaacaagcg gcatatctgc tgacactgtc
      841 attaagattg cgaaatagaa aaaaacaaaa acaagacaac taaaaaaaac attcccacca
      901 gtaattccat aagaaaatcg
//
LOCUS       DAJVUK010000327          910 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.332, whole genome shotgun sequence.
ACCESSION   DAJVUK010000327 DAJVUK010000000
VERSION     DAJVUK010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.332"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..>910)
                     /locus_tag="OQQ57_004318"
     CDS             complement(<1..>910)
                     /locus_tag="OQQ57_004318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1958816.1"
                     /translation="AFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGILV
                     SQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQ
                     MFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAF
                     VVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINM
                     PLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYA
                     SVLMATTPAVELELQILNAIFLGILCG"
BASE COUNT          281 a          214 c          213 g          202 t
ORIGIN      
        1 accacagaga ataccaagga agatggcatt tagaatttgc aattccagct caaccgccgg
       61 agtcgtcgcc atgagtacgc tggcgtaaaa acacatacca ctcacgatag caatgagcat
      121 taatagtcgc ttgccaatac gtttcatgta atagcctgcg attaacatca tcggaatttc
      181 cagaccggca gcgataccaa tcatttctcc agccagttta tcggttagat gcagttcatc
      241 aataataaat agcggcatat ttatcatgta gagattattc gccgcccaca tcattgaaca
      301 gaccacaaaa agtagccgcg tatcccgctt cctatgggtg gagggtaaaa tttctacggg
      361 ttgggtaacg acaggaatat ttctttgtat tgatggcaaa aacaaccaga ctatcagccc
      421 gcaaacaaca aatgcgatgg cagcggtgag atacatcact ttaaaactaa accccattgc
      481 cagttcataa gcgagcggtg gcccgataac ccaggcaagc gagatctgag cacgtaaaaa
      541 tgtactgaac atgaccgtct cacggcctgt tctgtcggcg tgttcacggg cgagggcgaa
      601 catttgcggg tttgcggtag aagcaaaact actcagaagt acgcccgtag agaggagaat
      661 gaagtagttg cgattccacg caaaaagcgt gcaggccagc actccaaata agcaacatag
      721 cagaatcagt aatttacggt cgccttgttt atcggagtgc cttgccagaa attgactgac
      781 cagaattccc ataatagcgc taccggtgaa gaaaaaacct accattatag gacgggcttt
      841 cagttcatct gcgaggaata tacttagggt aggagtctga agagcgcccg caatacccgt
      901 cagaaaggcg
//
LOCUS       DAJVUK010000328          909 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.333, whole genome shotgun sequence.
ACCESSION   DAJVUK010000328 DAJVUK010000000
VERSION     DAJVUK010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.333"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            23..373
                     /gene="tnpB"
                     /locus_tag="OQQ57_004319"
     CDS             23..373
                     /gene="tnpB"
                     /locus_tag="OQQ57_004319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017901265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1958817.1"
                     /translation="MISLPSGTRIWLVAGITDMRKSFNGLGEQVQHVLNDNPFSGHLF
                     IFRGRRGDMIKILWADADGLCLFTRRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDW
                     RQPKTSRLNALTML"
     gene            404..>909
                     /locus_tag="OQQ57_004320"
     CDS             404..>909
                     /locus_tag="OQQ57_004320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958818.1"
                     /translation="MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKI
                     EEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQ
                     VPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALK
                     VIRTERVK"
BASE COUNT          233 a          230 c          261 g          185 t
ORIGIN      
        1 gtgaactgac cgggagggga cgatgatctc actcccgtca ggcacccgca tctggctcgt
       61 tgctgggata accgatatgc gtaagtcttt caacgggctg ggtgaacagg tacagcatgt
      121 gctgaatgat aatcccttct ccggtcacct gttcatcttc cgtggccgac ggggtgacat
      181 gattaaaatc ctgtgggctg atgctgatgg tctgtgcctg ttcaccagac gcctggagga
      241 aggccagttt atctggcctg ctgtgcgtga cggcaaggta tccattaccc gctcgcaact
      301 ggcaatgctc ctcgataagc tggactggcg tcagccaaaa acatcccgcc ttaatgcact
      361 gacaatgttg taaaaatgtc atggccggat tataaaaacg gccatgaatc aaaaatacct
      421 cattcgcatt gcagaactgg aatgccagct ccgtcagaaa gaccagcaac tgagtctggt
      481 tgaagagacg gaggccttcc tgcgctctgc actggcccgc gccgaagaaa agatcgaaga
      541 agatgaacgg gaaatagaac atctgcgggc tcagatagaa aaactgcgcc ggatgctgtt
      601 cggtacccgt tctgaaaaac tgcgtcgtga agttgaacag gctgaggccc tgctgaaaca
      661 acgcgaacag gacagtgatc gttacagtgg gcgggaagac gatccgcagg ttccccgcca
      721 gttgcgacag tctcgtcatc gtcgcccgtt accggagcat ctgccccgcg aaataaatcg
      781 cctggagcca gaagaaagct gttgcccgga gtgtggcggt gagctggatt atctggggga
      841 agtcagcgca gaacaactgg aactggtgag cagcgctctg aaagtgatcc gcacagaacg
      901 ggtaaaaaa
//
LOCUS       DAJVUK010000329          904 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.334, whole genome shotgun sequence.
ACCESSION   DAJVUK010000329 DAJVUK010000000
VERSION     DAJVUK010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.334"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..175)
                     /locus_tag="OQQ57_004321"
     CDS             complement(<1..175)
                     /locus_tag="OQQ57_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HCS1958819.1"
                     /translation="MKSMDKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGS
                     LLLGLLTYLTNLYF"
     gene            complement(468..542)
                     /locus_tag="OQQ57_004322"
     tRNA            complement(468..542)
                     /locus_tag="OQQ57_004322"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(507..509),aa:Gly,seq:tcc)
     gene            complement(546..621)
                     /locus_tag="OQQ57_004323"
     tRNA            complement(546..621)
                     /locus_tag="OQQ57_004323"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(586..588),aa:Thr,seq:tgt)
     gene            complement(624..700)
                     /locus_tag="OQQ57_004324"
     tRNA            complement(624..700)
                     /locus_tag="OQQ57_004324"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(664..666),aa:Arg,seq:tct)
     gene            complement(702..778)
                     /locus_tag="OQQ57_004325"
     tRNA            complement(702..778)
                     /locus_tag="OQQ57_004325"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(742..744),aa:Ile,seq:cat)
BASE COUNT          266 a          232 c          212 g          194 t
ORIGIN      
        1 tgaaatacag attcgtcaga taagtcagaa gccccagaag cagacttccc agcacaccaa
       61 tcgcagccca ctgtgatgga ctgacctgat ccaaccactg caaaaaccag tagccggcac
      121 tgccggcgga ggtgccgtag gcaatgcccg ttgaaatttt gtccatggat ttcatagcct
      181 cacctccgca aataacggat ggcgtagttt tacactgaga aatgaaaggg atttgaaaag
      241 aaaaaaacgc aaaagcgggc gaaacgatat atacagtaag gaaagcactc tatccaacaa
      301 accacccaca gttaatcgga ataaaagcag agtgcttatg aatgatcgca cgcccgaagg
      361 ttagtatttc tgcacagcaa ttttgcaaaa aaaggcgatc attcataact taaacgtctt
      421 tcagtcactc cgggatttcc catcatcgca gactgaaaga ctctgactgg agcgggcagc
      481 gggaatcgaa cccgcatcat cagcttggaa ggctgaggta atagccatta tacgatgccc
      541 gcatatggtg ccgactaccg gaatcgaact ggtgacctac tgattacaag tcagttgctc
      601 tgcctgctga gctaagtcgg cgctggccca ccaccgagga ctcgaacctc gcaccgtcaa
      661 cttagaaggt tgatgctcta tccggatgag ctagtggtgg ttggtggccc ttgctggact
      721 tgaaccagcg acctggcgat tatgagtcgc tcgctctgac caactgagct aaagggccgg
      781 aggcagaata ataaccatat gtcatcacat ctgcaaactc atctgaccac cagcacgttt
      841 aacgtcctgt gccgtttttc aggtataaaa aaacccgcat aaagcgggct ctttcaaatg
      901 tcca
//
LOCUS       DAJVUK010000330          896 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.335, whole genome shotgun sequence.
ACCESSION   DAJVUK010000330 DAJVUK010000000
VERSION     DAJVUK010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.335"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>896
                     /locus_tag="OQQ57_004326"
     CDS             <1..>896
                     /locus_tag="OQQ57_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1958820.1"
                     /translation="EHADGSVTQSQFDAVGRLRTQTDAAGRTTEYSPDVVTGLITRIT
                     TPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDIIRYRYDNPHS
                     DLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYR
                     AYDSRGQLIAVKDTQGHETRYEYNAAGDLTAVIAPDGSRNGTQYDAWGKAIRTTQGEL
                     TRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSE
                     DEGLVTHWHYDEADRLTHRTVNG"
BASE COUNT          221 a          267 c          267 g          141 t
ORIGIN      
        1 gaacacgcgg acggcagcgt cacgcagagt cagtttgacg ccgtgggcag gctcaggaca
       61 cagacggatg ccgcaggccg gacaacagaa tacagcccgg atgtggtgac gggcctcatc
      121 acgcgcatca ccacgccgga tggcagggca tcggcgtttt actataacca ccacagccag
      181 ttaacgtcag ccaccgggcc tgacgggctg gaaatacgcc gggaatatga tgaatggggc
      241 cgtctgattc aggaaactgc ccctgacggc gatatcatcc gctaccgtta tgataatcca
      301 cacagtgact taccctgcgc aacggaagat gccaccggta gccggaaaac catgacgtgg
      361 agccgttacg gtcagttgct gagcttcacc gactgttccg gttatgtaac ccgttatgac
      421 catgaccgct tcgggcagat gacggcggtg caccgcgagg aagggctgag tcagtaccgc
      481 gcatacgaca gccgtggaca gttaattgcc gtgaaagaca cgcagggcca tgaaacgcgg
      541 tatgaataca acgccgccgg tgacctgacc gccgtcattg ccccggacgg cagcagaaac
      601 gggacacagt acgatgcgtg gggaaaggcc atccgtacca cgcagggcga gctgacgcgc
      661 agtatggaat acgatgctgc aggacgggtc atccgcctga ccagtgaaaa cggcagccac
      721 accaccttcc gttacgatgt actcgaccgg ctgatacagg aaaccggctt tgacggccgc
      781 acacagcgtt atcaccacga cctgaccggc aaacttatcc gcagcgagga tgaggggctg
      841 gtcacccact ggcactatga cgaagcagac cgcctcacgc accgcaccgt gaatgg
//
LOCUS       DAJVUK010000331          891 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.336, whole genome shotgun sequence.
ACCESSION   DAJVUK010000331 DAJVUK010000000
VERSION     DAJVUK010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.336"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(73..261)
                     /locus_tag="OQQ57_004327"
     CDS             complement(73..261)
                     /locus_tag="OQQ57_004327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HCS1958821.1"
                     /translation="MAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGDVVVSGATEPE"
     gene            522..857
                     /gene="iraM"
                     /locus_tag="OQQ57_004328"
     CDS             522..857
                     /gene="iraM"
                     /locus_tag="OQQ57_004328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HCS1958822.1"
                     /translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
                     LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQIC
                     PYGLKQQSP"
BASE COUNT          311 a          203 c          141 g          236 t
ORIGIN      
        1 ccggtgcatt tagtcccact gccagactgt cttttatggc ctggaatgcc gggccagtac
       61 gatgacgtag tatcactccg gctcagttgc accactgacc accacatcac cttctgctgc
      121 aatcgcctgc atcagggtat aaggggttat ggccaccgga ctaccaaacg gctgccagcc
      181 ctctttcagt ttatgtgtca gcttttccgc aagatctgac ggcggcgccg ccctgacaac
      241 atcatagtgt ttaaatgcca tggttctttc caccatctga aaaataattc tttaaaatac
      301 ctgacatgta atacagaaaa aacacaaaac cataccttaa ataaaaacct gattatcaag
      361 cagatatgca tggataaact acaagacgag atataaacca ccctgcattt aaataaacaa
      421 taaacaacat cagaaaaata attctgctct atggtttaca ttcaaaaata tcatttatac
      481 ttttcagaac atcaccagca aggcataaac aaggaaacta aatgaagtgg attgtgattg
      541 atacagttat ccagccatca tgcggaatat ctttttcagt catatggagt aaaataaaat
      601 taataatctg gtatcaatcg gatgctttct tacctcctga aagtatattt acactgactc
      661 acacaggcat catgctcaat aacaaagtgc tacctgtaac catttacaac gtagtaccat
      721 tcaataaaac attctggaat ttaatcaaaa acagccagga atgccctaca aatacagata
      781 acgtattgaa tgaatgcttt aataaccgtt gcactctgca aatatgtcct tatggactaa
      841 aacaacaaag tccataagga gtttactcac atctgacaaa atcaatataa a
//
LOCUS       DAJVUK010000332          881 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.337, whole genome shotgun sequence.
ACCESSION   DAJVUK010000332 DAJVUK010000000
VERSION     DAJVUK010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.337"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            200..>881
                     /locus_tag="OQQ57_004329"
     CDS             200..>881
                     /locus_tag="OQQ57_004329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1958823.1"
                     /translation="MLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEE
                     QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
                     QLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPEL
                     LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
                     ENLRNGYFD"
BASE COUNT          300 a          211 c          126 g          244 t
ORIGIN      
        1 acattaaacc gatccagttt aggatagtgt aaagcagaag ttcttcaata tataacatat
       61 ggagttaata tgcttacaca aactatatat ccgcctcctc cagaagttcc tgtctactgc
      121 tgaagggaac caataacatt gcaaagcaga taaaaaagaa tccaacacct ctcaacataa
      181 agaatacgcc ctgatattta tgctcccgac aaataacaat cacagattaa tttcaaattc
      241 gttctccact tattcaatcg acactagccg cgcatatgaa aattatctaa cccattggac
      301 tgaatggaaa aataaccgca tacaagaaga acaacgagac atcgcttttc agcgactagt
      361 atcatgtcta caaaaccaag agacgaacct agacttgtct gaattaggcc tgacaacatt
      421 acctgaaatc cccccgggaa ttaaatcaat taatataagt aaaaataatt taagcttaat
      481 ctccccattg cctgcgtccc ttacacagct taatgtcagc tataacagac ttattgaact
      541 gcctgctttg cctcaaggac ttaaattatt gaatgcgtcc cacaatcaac taatcacact
      601 acccacactc cccatatctt tgaaggagct tcatgtctca aataatcaat tatgttctct
      661 tcctgtttta ccagaactac tggaaacatt agatgtatca tgtaatgggc tggcagtttt
      721 accaccttta ccattttctt tacaagagat tagcgcaata gggaatcttc ttagtgaact
      781 cccccctcta cctcacaaca ttcactccat atgggcaatc gacaatatgt taaccgatat
      841 tccatacctg ccggaaaatt taaggaacgg ttattttgac a
//
LOCUS       DAJVUK010000333          866 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.338, whole genome shotgun sequence.
ACCESSION   DAJVUK010000333 DAJVUK010000000
VERSION     DAJVUK010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.338"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>866
                     /locus_tag="OQQ57_004330"
     rRNA            <1..>866
                     /locus_tag="OQQ57_004330"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          212 a          196 c          282 g          176 t
ORIGIN      
        1 cttgttggtg gggtaacggc tcaccaaggc gacgatccct agctggtctg agaggatgac
       61 cagccacact ggaactgaga cacggtccag actcctacgg gaggcagcag tggggaatat
      121 tgcacaatgg gcgcaagcct gatgcagcca tgccgcgtgt atgaagaagg ccttcgggtt
      181 gtaaagtact ttcagcgggg aggaagggag taaagttaat acctttgctc attgacgtta
      241 tccgcagaag aagcaccggc taactccgtg ccagcagccg cggtaatacg gagggtgcaa
      301 gcgttaatcg gaattactgg gcgtaaagcg cacgcaggcg gtttgttaag tcagatgtga
      361 aatccccggg ctcaacctgg gaactgcatc tgatactggc aagcttgagt ctcgtagagg
      421 ggggtagaat tccaggtgta gcggtgaaat gcgtagagat ctggaggaat accggtggcg
      481 aaggcggccc cctggacgaa gactgacgct caggtgcgaa agcgtgggga gcaaacagga
      541 ttagataccc tggtagtcca cgccgtaaac gatgtcgact tggaggttgt gcccttgagg
      601 cgtggcttcc ggagctaacg cgttaagtcg accgcctggg gagtacggcc gcaaggttaa
      661 aactcaaatg aattgacggg ggcccgcaca agcggtggag catgtggttt aattcgatgc
      721 aacgcgaaga accttacctg gtcttgacat ccacggaagt tttcagagat gagaatgtgc
      781 cttcgggaac cgtgagacag gtgctgcatg gctgtcgtca gctcgtgttg tgaaatgttg
      841 ggttaagtcc cgcaacgagc gcaacc
//
LOCUS       DAJVUK010000334          851 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.339, whole genome shotgun sequence.
ACCESSION   DAJVUK010000334 DAJVUK010000000
VERSION     DAJVUK010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.339"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            45..323
                     /locus_tag="OQQ57_004331"
     CDS             45..323
                     /locus_tag="OQQ57_004331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005028610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2612 domain-containing protein"
                     /protein_id="HCS1958824.1"
                     /translation="MSDAVYRRLILMKAMSNITDCSVPDINRMLRFMFGKKRRAYVLN
                     NGGLRMSYIFESALSLAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ"
     gene            310..>851
                     /locus_tag="OQQ57_004332"
     CDS             310..>851
                     /locus_tag="OQQ57_004332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000772810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1958825.1"
                     /translation="MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFP
                     PVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAIL
                     AGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTVRDN
                     LQVYSKEQSDQRYVHREGDK"
BASE COUNT          218 a          196 c          239 g          198 t
ORIGIN      
        1 aggcaccgtt ttacaacgga aaatcggata cccggactgt tgacctgtct gatgctgtat
       61 accggcggct gatactgatg aaagccatgt cgaacattac tgactgttcc gttccggata
      121 ttaaccggat gctgagattt atgttcggaa aaaaacggcg agcttatgtt ctgaataatg
      181 gtgggctgag gatgagttac atctttgagt ccgcgctctc gttggcagaa ctggcgatta
      241 tccagtcgtc gggtgcactg ccgtccccgc cgggtgttta tgtttcagta gttttaaagg
      301 agtcccgtaa tgaaggccag tgataaaccc cgccagctgg cggtcccctt tgcgagtacc
      361 ggagataaaa accgtatccc ggacaaggcg acacagcaga ccagagagag cggtaatgct
      421 gcgtatgatt caggttttcc tccggtgacc atgacagcgg tctcagcggg aggtataccg
      481 ccacacggca aggattttaa cggtctgatg tacgatatta ccgcagcaat acggttcgcc
      541 caggctggcg gtttgtacac gtataatgcc ggttttgcgg gggccattgg tggatatgca
      601 aaaggagcca ttctcgccgg agtcgcaaca acagcggtct ggctgaatac cacagacgat
      661 aacctgaccg atcctgaagg ctccgacagt gcgggctggg taaatcttct tgaggatccg
      721 aaaaggatat tcctgcggca gaagaacaat ctgtcagacc ttcagaataa agggacggta
      781 cgggataatc ttcaggttta cagtaaagag cagtcagatc aacgctatgt tcatcgggaa
      841 ggcgataaaa t
//
LOCUS       DAJVUK010000335          835 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.340, whole genome shotgun sequence.
ACCESSION   DAJVUK010000335 DAJVUK010000000
VERSION     DAJVUK010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.340"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>835
                     /locus_tag="OQQ57_004333"
     CDS             <1..>835
                     /locus_tag="OQQ57_004333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1958826.1"
                     /translation="LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC
                     IGVEILLRWNNPRQGRISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHV
                     GINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVK
                     LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL
                     VAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM
                     PL"
BASE COUNT          193 a          213 c          216 g          213 t
ORIGIN      
        1 actggtgggc tacatcgcct ggctggcgac cgcttaccgg atgagctttt cccgcgaaat
       61 caatctgggc ctggcgcaac atgagttcga attgttctgt cagcctttgc ttaatgcgcg
      121 cagccagcaa tgtattggtg tagagatttt gctgcgctgg aacaatccgc gtcagggccg
      181 gatttcaccg gatgtgttta ttcctatcgc ggaagaacat catttaattg tgccactgac
      241 ccgctatgtg atggcagaaa ccattcgtca gcgccatgtt ttcccgatga gtagtcagtt
      301 tcatgttggc attaacgtcg cacccagcca ttttcgccgt ggtgtgctga taaaagatct
      361 caatcagtac tggtttagcg ctcacccgat tcagcaactg atcctcgaaa tcaccgaacg
      421 cgatgcctta ctggatgttg attatcggat tgcccgcgag ctacatcgta aaaacgtcaa
      481 actggcgatt gatgacttcg gcaccggcaa cagttcattt tcctggcttg aaacattacg
      541 tcctgacgtg ctgaaaattg ataagtcatt taccgcagct ataggttctg acgcggttaa
      601 ctcgacggtg accgatatca tcatcgcgct ggggcaaaga ctgaatattg aactggtggc
      661 ggagggcgtg gaaacgcaag aacaggcgaa gtatttgcgc cgtcatggcg tgcatatttt
      721 gcaagggtat ttgtacgcac agccgatgcc gctacgcgat tttcccaaat ggctggcggg
      781 cagccaaccg ccgcccgccc ggcataatgg acatatcacg cccattatgc cgtta
//
LOCUS       DAJVUK010000336          811 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.341, whole genome shotgun sequence.
ACCESSION   DAJVUK010000336 DAJVUK010000000
VERSION     DAJVUK010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.341"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            123..>811
                     /locus_tag="OQQ57_004334"
     CDS             123..>811
                     /locus_tag="OQQ57_004334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958827.1"
                     /translation="MLPSISINNTSATYPESINENNNDEVNGLVQELKNLFNGKEGIS
                     TCIKHLLELIKNAIRVNDDPYRFNINNSSVTYIDIGSNDTDHITIGIDNQEPIELPAN
                     YKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGAPSFIFDKISHKLRHTVTEF
                     DESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGD
                     SLTQYCSENAR"
BASE COUNT          312 a          143 c          133 g          223 t
ORIGIN      
        1 tggctattgt gcgctcatac actcaaatta aagataggtt ctaaataaat gagcgttttt
       61 tgatagtcta tttcattagg taatatatat ttgtaacaaa tcaatcaaaa tggaataaaa
      121 tcatgctacc atctatttca atcaacaata ccagcgcaac ttacccagaa tccattaatg
      181 aaaataacaa tgatgaagtt aatggattag tacaagagct caaaaacctt tttaatggta
      241 aggaaggaat aagcacctgt attaaacatc tacttgagct tataaaaaac gccatacgag
      301 taaacgacga tccttataga tttaatatta ataattcctc agttacttat attgatattg
      361 gctccaatga tacagaccat attactattg gtatcgacaa ccaagaacca atagaattac
      421 ctgcgaacta taaagacaaa gaactcgtcc gtactatcat taatgacaac atagttgaga
      481 agactcatga tatcaataac aaggaaatga tcttcagcgc attaaaagaa atatatgatg
      541 gagctcctag ttttatcttc gataagatat cacacaaact cagacatacg gtaacggaat
      601 ttgatgagag cgggaaaagc gaaccaacgg acttatttac ctggtacggt aaagataaaa
      661 aaggcgactc tctcgctatt gtaattaaaa ataaaaacgg aaatgattac ttatccctcg
      721 gttactacga tcaggacgac taccacattc aaagaggaat tcgtattaat ggtgatagtc
      781 tcacccaata ttgtagtgaa aacgccagga g
//
LOCUS       DAJVUK010000337          804 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.342, whole genome shotgun sequence.
ACCESSION   DAJVUK010000337 DAJVUK010000000
VERSION     DAJVUK010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.342"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..624
                     /locus_tag="OQQ57_004335"
                     /pseudo
     CDS             1..624
                     /locus_tag="OQQ57_004335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
     gene            675..>804
                     /locus_tag="OQQ57_004336"
     CDS             675..>804
                     /locus_tag="OQQ57_004336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HCS1958828.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAK"
BASE COUNT          187 a          204 c          215 g          198 t
ORIGIN      
        1 gttcttcggt attcatggcg cgctggcgct gaccgcactg gacaacggca ttatgacgct
       61 gtgggcgctg gaaaatatcg cgacctatca gcaatatggt tccgtcgaag cggcgctggc
      121 agccggtaag accttccata tctgggccaa gccgatgctg gactccttta ttttccttgg
      181 ggcagtggtg cgactttagg cctgatcctg gctatcttta tcgcctctcg ccgtgctgat
      241 tatcgtcagg tggcaaaact ggcgctgccg tccggcatct tccagattaa cgaaccgatt
      301 ctgtttggtc tgccaattat catgaacccg gtgatgttta tcccgtttgt actggtacaa
      361 ccgattctgg cggcaatcac cctcgcagcg tactacatgg gcattattcc tccggtgacc
      421 aatattgcac cgtggaccat gccaaccggt ctgggagcct tctttaacac caacggtagc
      481 gtcgctgcat tgctggtcgc actcttcaac cttggtatcg caacgttaat ttatctgccc
      541 tttgttgtgg tggctaacaa agcgcaaaac gcgattgata aagaagagag cgaagaagat
      601 atcgctaacg ccctgaaatt ttaatcgatg ccggtacggt taatcgtgcc ggtaagaaga
      661 gagaggaacg atgtatgatg gatctcgata acattcccga tacgcaaaca gaagctgaag
      721 agctggaaga agtggtgatg gggcttatca tcaactccgg acaagcgcgc agcctggcgt
      781 atgcggcact gaaacaggcg aagc
//
LOCUS       DAJVUK010000338          802 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.343, whole genome shotgun sequence.
ACCESSION   DAJVUK010000338 DAJVUK010000000
VERSION     DAJVUK010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.343"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..428
                     /gene="envY"
                     /locus_tag="OQQ57_004337"
     CDS             <1..428
                     /gene="envY"
                     /locus_tag="OQQ57_004337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator EnvY"
                     /protein_id="HCS1958829.1"
                     /translation="CEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQ
                     SDIQHYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNIT
                     QVAQLCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW"
     gene            complement(474..550)
                     /locus_tag="OQQ57_004338"
     tRNA            complement(474..550)
                     /locus_tag="OQQ57_004338"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(514..516),aa:Arg,seq:tct)
BASE COUNT          224 a          185 c          185 g          208 t
ORIGIN      
        1 cctgcgaagc ggagttgacg cgcgcattac tttttaccgt attgtctaac tttcttgagc
       61 aatcgcggtt tattgcccta ctgatgtata tcttacgcag cagcgtccgc gacagcgtct
      121 gccgcattat tcaaagcgat attcagcatt actggaatct gcgaattgtc gccagttcgc
      181 tatgtttaag ccccagcctg ctcaaaaaga aattaaaaaa cgaaaatacc agctatagcc
      241 agattgtcac agagtgtcgt atgcgttacg ccgtacagat gttattgatg gataacaaaa
      301 atatcactca ggtggcgcaa ttatgtggct atagcagcac gtcgtacttt atctctgttt
      361 ttaaggcgtt ttacggcctg acaccgttga attatctcgc caaacagcga caaaaagtga
      421 tgtggtgaag ggcaaagcgg aaacggataa gacgggcata aatgaagaag aaatggcgcg
      481 ccctgcagga ttcgaacctg cggcccacga cttagaaggt cgttgctcta tccaactgag
      541 ctaagggcgc gttgataccg caatgcggtg taatcgcgtg aattatacgg tcaacccttg
      601 ctgagtcaat ggcttttgat ctggttgctg aacaagtgaa cgaccgcgtc tgattttctg
      661 atttatttcg ctatagcggc aaacaaacgc acaccgctgc gcgtctgaat caagaaaacc
      721 cgtattttca tgtatcaaag tacaatttac cgccctaacg gaaaattgtc cgctcctatg
      781 agactggtaa ctatgaaacc aa
//
LOCUS       DAJVUK010000339          790 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.344, whole genome shotgun sequence.
ACCESSION   DAJVUK010000339 DAJVUK010000000
VERSION     DAJVUK010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.344"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>790
                     /locus_tag="OQQ57_004339"
     CDS             <1..>790
                     /locus_tag="OQQ57_004339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS91-like element ISSbo1 family transposase"
                     /protein_id="HCS1958830.1"
                     /translation="LACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGKKATD
                     LWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQE
                     PGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLL
                     KAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKK
                     PPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLK"
BASE COUNT          185 a          206 c          251 g          148 t
ORIGIN      
        1 tgctggcctg cggcacgcgg atactgggag tgaaggaata catctgcgat aaacctgagt
       61 gcccccacgt cagatacgtc actaactcat gcggcagccg tgcctgcccg tcctgcggaa
      121 aaaaggccac agacctgtgg atagcgacac agctgaatcg tcttcctgac tgcgactggg
      181 tacacctggt cttcaccctg ccggacacgc tgtggccggt gttcgaaagc aaccggtggc
      241 tgctgaatga cgtgtgccgt ctggcggtgg agaatctgct gtatgccgcc cggaaacggg
      301 ggcaggaacc cggtatcttc tgcgccatcc acacgtatgg ccgtcgtctc aactggcatc
      361 cgcatgtaca tgtgtctgta acctgtggag gtctgaataa gcatggtcag tggaaaaagc
      421 tgagcttcct gaaagacgcg atgcgttcac ggtggatgtg gaatatgcgg cagctgcttc
      481 tgaaagcgtg gtcagagggg ctggcgatgc cggagtcgtt gtcacatatc acgacggaat
      541 cacagtggag aagcctggtg ctgaaagccg gaggaaaata ctggcatgtg tacatgtcga
      601 aaaaaacggc cggcgggagg aatacggcgc gctacctggg tcgttatctg aagaagccgc
      661 cgatagcggc ctcccggctg gcacattaca acggaggggc gagcctgaac ttccgttacc
      721 tggaccacaa aacgggagaa acggcgacgg aaacgctgac acagcgtgag ctggtcgcga
      781 ggctgaaaca
//
LOCUS       DAJVUK010000340          750 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.345, whole genome shotgun sequence.
ACCESSION   DAJVUK010000340 DAJVUK010000000
VERSION     DAJVUK010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.345"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..559
                     /locus_tag="OQQ57_004340"
     CDS             <1..559
                     /locus_tag="OQQ57_004340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA
                     acyltransferase"
                     /protein_id="HCS1958831.1"
                     /translation="NVIFLVPHGWSVDIPAMLLAAQGKKMAAMFHQQRNPVIDYVWNS
                     VRRKFGGRLHAREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFADFFATYKATLPII
                     GRLMNISQAMIIPLFPVYDEKKHLLTIEIRPPMDACIASADNKMIARQMNKTVEILVG
                     PHPEQYVWVLKLLKTRKSNEADPYP"
BASE COUNT          232 a          149 c          175 g          194 t
ORIGIN      
        1 aaatgtgatt tttctggttc cccatggctg gagcgtggat attcctgcaa tgttgctggc
       61 agctcaggga aaaaaaatgg ccgccatgtt tcatcagcaa cgaaatccag tgattgatta
      121 tgtctggaat tcagtacggc gtaaattcgg ggggcgctta catgcccggg aggatgggat
      181 aaaaccattt attcagtcag tacgccaggg atactgggga tattacctcc cagatcagga
      241 tcatggtcct gaatacagtg aatttgctga tttttttgcg acctataaag cgacattacc
      301 aatcattgga cgtctgatga acatcagtca ggctatgatt ataccacttt tcccggttta
      361 tgatgaaaaa aaacatctcc tgactattga aattcggcca ccaatggatg cttgcattgc
      421 cagcgcggac aataaaatga ttgcccgaca aatgaacaaa acagtggaaa ttttggtggg
      481 gccacatccg gaacagtatg tctgggtttt aaaattgtta aaaacacgca aatcaaacga
      541 agcggacccg tacccttgaa attataaagt ataagtattt ccactagttg tttgtaagcg
      601 tacagcctga accgtctggt cagaatctga cgaattagac aaagtggtgt ccaccaaata
      661 agtagtggga accaatgagg tagcctgagt ttaacggaca ctccttcctg aaatagaatg
      721 gcatcagaag gagctaataa tgagcagaaa
//
LOCUS       DAJVUK010000341          743 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.346, whole genome shotgun sequence.
ACCESSION   DAJVUK010000341 DAJVUK010000000
VERSION     DAJVUK010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.346"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..357
                     /gene="cybB"
                     /locus_tag="OQQ57_004341"
     CDS             <1..357
                     /gene="cybB"
                     /locus_tag="OQQ57_004341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HCS1958832.1"
                     /translation="RLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL
                     VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY
                     FWKDNTLLRMMPRKRS"
     gene            602..>743
                     /locus_tag="OQQ57_004342"
     CDS             602..>743
                     /locus_tag="OQQ57_004342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958833.1"
                     /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
                     DGS"
BASE COUNT          196 a          162 c          173 g          212 t
ORIGIN      
        1 cgtcttttgt taaggctgaa atacccaacc ccgccgatta tacctaagcc aaaaccgatg
       61 atgacgggac tggcgcattt gggacatttg gtgatttatc tcctgtttat tgcgctgcca
      121 gtgattggtt tggtgatgat gtataaccgg ggcaacccgt ggtttgcgtt tggtttgacg
      181 atgccttacg cttcagaggc caatttcgaa cgggttgata gcttaaagtc gtggcatgaa
      241 acgctggcga atctgggata ttttgtcatc gggttgcacg ctgcggctgc actggcacac
      301 cactatttct ggaaggacaa cacacttcta cgcatgatgc cgcgtaaacg ttcctgaagg
      361 atatttaaag aaaacgcctg tactaaaacc gacccgtggt acaggcgaag aatacgggtc
      421 tacatcggaa gcgcctatta tatttatttg tatgacaaat aaaaccataa tccttgccca
      481 tacgtccatc tggcttattt ttaatcaatt cacccgatct ttgatctcat caacggtatc
      541 aaaataaacc agcgtataac gttcaaatcg aacataagat tcgataaacc atggaggtta
      601 tatgaaaaaa ctggcactta ttttgtttat gggaacgctt gtttcctttt atgccgatgc
      661 cgggcgcaaa ccctgttctg gttcgaaagg ggggatctca cactgtacgg caggcggcaa
      721 atttgtctgt aatgatggtt cta
//
LOCUS       DAJVUK010000342          732 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.347, whole genome shotgun sequence.
ACCESSION   DAJVUK010000342 DAJVUK010000000
VERSION     DAJVUK010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.347"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            135..564
                     /locus_tag="OQQ57_004343"
                     /pseudo
     CDS             135..564
                     /locus_tag="OQQ57_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          182 a          145 c          233 g          172 t
ORIGIN      
        1 attcctgccg gtatcaacgc cgacggcatg tattgccctg aatgcggtac ggttcactgg
       61 ccggatggcg ttattccgcc tttctgatgc ttccccgttt tgccgatatt tttcagcagg
      121 gaaaccgatg gcttaactgg ctggagaagc agccggtgca gatgagccgc ctggaacatt
      181 atgccggtca ggatgaaatt ggcctgcgtt acaacagcca ccggacaaaa cgagaagaaa
      241 accttgtgat gagtggcgac gagtttatgg aaaggttctc ctggcatgtg gcggataagg
      301 ggttccggat ggtgatacgg ggtcctgagt ccggtgaagc ggcgattact ggaagatgtg
      361 gtgtacgcca taacggagac agtgagaaaa acggcgaggc aaatcacaag gagagggatg
      421 tatcagcagt gactgaaggt tgacccgctg aagtgcgagc tgtgcggagg tcagatgcgg
      481 tttacggggc tgaagagggg ttaccgtctg gcagagcagg ttatgatgca tgagccgctg
      541 gctcgaatac ggtggtgcgg ctgagagtcg cagaggggaa gttgcgtcca tgttgagggg
      601 aacggagcaa aaaaccatca gagatacatt gaatcaatca atgtaagcaa tattaagtgt
      661 ctataccgat tacttgatga tcaggttgtg ttgaataaac gcgcattctt cggtgctttt
      721 ttaatctttt gg
//
LOCUS       DAJVUK010000343          720 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.348, whole genome shotgun sequence.
ACCESSION   DAJVUK010000343 DAJVUK010000000
VERSION     DAJVUK010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.348"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            240..509
                     /locus_tag="OQQ57_004344"
     CDS             240..509
                     /locus_tag="OQQ57_004344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958834.1"
                     /translation="MAQVNMSVRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNSWFRDQVAAGRQQLECGDVLPHDMVESSAAAWRDEMSRKIADK"
     gene            506..720
                     /locus_tag="OQQ57_004345"
                     /pseudo
     CDS             506..720
                     /locus_tag="OQQ57_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585073.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          187 a          168 c          202 g          163 t
ORIGIN      
        1 ctgaaaacgg ctcacaactg caccattcat aatcacatcg cataaaactg tcagcgccag
       61 tgataggaca ggtgaaacct gtcaatacgt accggcttac gccgggcttc ggcggtttta
      121 ctcctctgcc atatgcaaca acggagtgcc gccttacatg ccgctggcgc ggcatatcct
      181 ggtgacgata tctgaacagt tatatactgt gtatatacgt ggtaatgacg aggtggcaaa
      241 tggcacaggt taatatgagt gtaagaatcg acgcagaact gaaggatgct tttatggccg
      301 ctgcaaaaag catggaccgt aatggctctc agttaatccg ggattttatg cgccagaccg
      361 ttgaacggca gcacaattct tggttccgtg accaggttgc ggcaggccgt cagcaactcg
      421 aatgcggtga tgtgcttccc catgacatgg tcgaatcctc tgctgctgca tggcgggatg
      481 aaatgagcag gaagattgct gataaatgat ggagatgttc tggaccatgc tggccatcca
      541 ggacaggaag cgcattcgta gtacattgcg gagcagaacc tgatggccgc cattgaaccg
      601 gacgaacgga ttggttattc agccagcagc ctggcagggc agccgtataa aggccgcaac
      661 ggtcgtgtgg aaggaacatc tggaccacac aaggtagcgt gtaacgttat tttgtgtgaa
//
LOCUS       DAJVUK010000344          703 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.349, whole genome shotgun sequence.
ACCESSION   DAJVUK010000344 DAJVUK010000000
VERSION     DAJVUK010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.349"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(100..327)
                     /locus_tag="OQQ57_004346"
     CDS             complement(100..327)
                     /locus_tag="OQQ57_004346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1958835.1"
                     /translation="MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQE
                     ASGGELQYDPKVYDEYRKAKRPGKVIHENQA"
     gene            404..>703
                     /locus_tag="OQQ57_004347"
     CDS             404..>703
                     /locus_tag="OQQ57_004347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1958836.1"
                     /translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
                     PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALP"
BASE COUNT          189 a          188 c          151 g          175 t
ORIGIN      
        1 tcgccgcccc cctgccgcag atattcttca gtaattgcgt tagcgaccca cgcctgccct
       61 ttttcggctg ccagggctaa cagcactgat tcgatgtgct catgcctgat tttcatgaat
      121 caccttccca ggtcgttttg ccttacgata ttcgtcataa actttggggt cgtactgaag
      181 ttccccgcca gatgcctctt gcaggcgcat cgcgcggcct tcaggaacca gttcccccca
      241 tgcagcaatg cttgccagcc taactcctgc ggcattggca agctttgttt tgctgccaaa
      301 aaacgctata gcatcaattt tcaacatatc gagctcctta gattttccta aggaaactag
      361 atcgtagaga aacctaagtc aagaaagatt agaattccct aatatgaaaa acgaaacctt
      421 cggtgctcgc ctcttacata ggcgtaaaaa attaaaactg tctcaggccg cattaggtaa
      481 gctggtcaaa gtggctcacg taacaatttc tcaatgggaa agagatgaaa cacagccggc
      541 ggggaaaaga ttattcgcac tgagccaagc gcttcagtgc tcaccgactt ggcttctttt
      601 tggggatgaa gataaacaac caggcgaacc gatcccggat aatcagccag ccattctgac
      661 agaagatcaa aaagagttac ttcaactgtt cgacgcactg cct
//
LOCUS       DAJVUK010000345          658 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.350, whole genome shotgun sequence.
ACCESSION   DAJVUK010000345 DAJVUK010000000
VERSION     DAJVUK010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.350"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..456
                     /locus_tag="OQQ57_004348"
     CDS             <1..456
                     /locus_tag="OQQ57_004348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1958837.1"
                     /translation="NIQAGTARKFTLSSANNSTKNAAFYLWGNPSRSVVAELGDDSGW
                     HFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVS
                     WRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQKLINGTWYNVASV"
     gene            459..>658
                     /locus_tag="OQQ57_004349"
     CDS             459..>658
                     /locus_tag="OQQ57_004349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000902876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1958838.1"
                     /translation="MLHLKNITAGNPKTVEQYQLTKQYDVTWLFSKDGKNWYEELKNF
                     ASDTIKITYTGDGRVVWVGKDVT"
BASE COUNT          194 a          142 c          168 g          154 t
ORIGIN      
        1 aatattcagg ccggaactgc cagaaaattc acgttatcca gcgccaacaa ctccacgaaa
       61 aatgcagcgt tttatttgtg gggtaatcca tccaggtctg ttgttgcaga gcttggcgat
      121 gattcaggct ggcatttttt cagccagagg aatacagata acagcatcac gttcgccgta
      181 aacggacagg taattccgtt aaattacgga aacttcgatg cccgctataa atatcgaaca
      241 gagggggtac aggatgtacg gtatggccat gaaatgtatt acagccccgg cagtaacacc
      301 gtttcgtgga gatttcgcgc accttcggga cacgggctgt cagggatagc gatatcggat
      361 accggccgtg actcagcgga taacgtcaac ggcgtgtatt accgcccgct tcagaaactg
      421 attaatggca cctggtataa cgtggcgagt gtttaacaat gttgcattta aaaaatatta
      481 ctgcgggcaa tccgaaaacc gtggaacaat atcagctgac aaaacaatat gatgtcacct
      541 ggcttttttc gaaagacgga aaaaactggt atgaagagct gaagaatttc gccagcgaca
      601 caattaaaat aacttacacc ggagacggtc gcgtggtgtg ggtcggtaag gatgtgac
//
LOCUS       DAJVUK010000346          655 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.351, whole genome shotgun sequence.
ACCESSION   DAJVUK010000346 DAJVUK010000000
VERSION     DAJVUK010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.351"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..381)
                     /gene="virK"
                     /locus_tag="OQQ57_004350"
     CDS             complement(<1..381)
                     /gene="virK"
                     /locus_tag="OQQ57_004350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HCS1958839.1"
                     /translation="MFSISNLSFIGFLKRIIFFSDSLPGKWEHRKFRFMYILRCSINP
                     VVSIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGE"
     gene            complement(386..>655)
                     /locus_tag="OQQ57_004351"
     CDS             complement(386..>655)
                     /locus_tag="OQQ57_004351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCS1958840.1"
                     /translation="FGMVLAEASAFSVPVVATQIGGIPEVIQNNQTGTLLPAGNKHAW
                     MCALNNFFNDPGRFYQMARLAKQDIEERFDINKTALKILTLAKQK"
BASE COUNT          201 a          143 c          124 g          187 t
ORIGIN      
        1 ctctccatct ttcccgatga attggactaa tgataccgat ttttgtggaa acaaaaattt
       61 agaatatttt tctggcaaat tttgcacaaa gcgataatgc tcaagaatat attgtccacg
      121 ggtccaggcg cgcccccctt tatgcaaata agggcgatga attcttgctg gcaacgtggg
      181 gtgtattgcc agaatatcct caatgcacgg caaggaacgc agttcataat aatatcgaat
      241 actgacaacc ggatttatag aacatcgcaa aatgtacatg aaccgaaatt ttctgtgttc
      301 ccacttcccc ggtagtgaat ctgagaaaaa aataatcctt ttaaggaaac cgataaatga
      361 taagttactt atagaaaaca tattgttact tttgcttcgc taatgtgagt atttttaacg
      421 cagttttatt aatatcaaac cgctcttcta tatcctgttt tgccaggcga gccatctgat
      481 aaaaacgccc agggtcatta aaaaaattat tcagggcgca catccatgcg tgcttattac
      541 ctgctggtaa caatgtcccg gtctggttgt tctgaataac ctcagggatt ccaccaatct
      601 gagtggccac tacaggcaca gaaaatgccg atgcttctgc cagcaccata ccaaa
//
LOCUS       DAJVUK010000347          620 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.352, whole genome shotgun sequence.
ACCESSION   DAJVUK010000347 DAJVUK010000000
VERSION     DAJVUK010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.352"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..247)
                     /locus_tag="OQQ57_004352"
     CDS             complement(<1..247)
                     /locus_tag="OQQ57_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958841.1"
                     /translation="MFPVSSIGNDISSDLVRRKMNDLPEIPIENNLEALAPGIEKLKQ
                     TSIQMVTLLNALQPGGKCIITGDFQKELAYLQNVILYN"
     gene            complement(269..>620)
                     /locus_tag="OQQ57_004353"
     CDS             complement(269..>620)
                     /locus_tag="OQQ57_004353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417590.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958842.1"
                     /translation="TALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDNYIIQTLDV
                     GTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTQKEAILTAPTHFNKTCITSDCWQ
                     ILFFSPDHFNNDFY"
BASE COUNT          196 a           96 c          114 g          214 t
ORIGIN      
        1 cattataaag aattacattt tgtaagtacg ctaattcttt ttgaaaatca ccagtgataa
       61 tacattttcc acctggttgt aacgcgttaa gtaaagtgac catttgaata gaggtctgtt
      121 ttagtttttc tatacctggt gctagtgctt cgagattatt ttctatgggg atttcaggaa
      181 ggtcattcat ttttcgacgg actaaatcac tactaatatc attaccaatt gatgaaacag
      241 ggaacattat tttatccttt ataaataatc aataaaaatc attattaaaa tgatcgggtg
      301 aaaaaaagag aatttgccaa caatctgaag taatgcaggt tttattaaag tgcgtagggg
      361 ctgttaagat ggcttctttt tgggtgaact ttgcgcaata cttagaaatc gtctccttaa
      421 tacattccag ctctttttta ttgacggctg agcaagtaca ttgttcacca aaaggtgcaa
      481 aagtgcctac atctaatgtt tgtatgatat aattatcatg ttctcctgta gaaatatcta
      541 tgatgaatgg actcatattt tccggttgga ttcggatcat gacagaagga acatcgcctt
      601 gatagaaatt caatgcagta
//
LOCUS       DAJVUK010000348          617 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.353, whole genome shotgun sequence.
ACCESSION   DAJVUK010000348 DAJVUK010000000
VERSION     DAJVUK010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.353"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..426
                     /locus_tag="OQQ57_004354"
     CDS             <1..426
                     /locus_tag="OQQ57_004354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HCS1958843.1"
                     /translation="LNLASGEGNFFIRPGGVFYVAGDKVGIIRLDAFKTSKEIQFAVQ
                     SGPMLLENGVINPRIHPNVASRKIRNGVGINKQGNAVFLLSQQATNFYDFACYAKAKL
                     NVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
     gene            509..>617
                     /locus_tag="OQQ57_004355"
     CDS             509..>617
                     /locus_tag="OQQ57_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase"
                     /protein_id="HCS1958844.1"
                     /translation="MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDG"
BASE COUNT          177 a          120 c          149 g          171 t
ORIGIN      
        1 ttaaatctcg cctcaggtga agggaatttc tttatccgtc ctggcggcgt gttttatgtt
       61 gcgggagata aagtcggcat cattcgtctg gatgccttta aaaccagtaa agagattcag
      121 tttgcggtgc agtcagggcc aatgttatta gaaaacggcg taattaatcc acgcattcac
      181 ccgaatgttg cctcgcgtaa aattcgtaac ggtgtaggga ttaataaaca agggaacgcc
      241 gtgtttttgt tgagccagca ggcgacaaat ttttatgatt ttgcctgtta tgccaaagcg
      301 aaactgaacg ttgagcagtt gctttatctt gatggcacaa tttcacatat gtatatgaaa
      361 ggcggggcaa tcccgtggca acgctatcct tttgtcacca tgatttccgt cgagcggaaa
      421 ggttaagcat tgtacactcg aggaggccag acaaactggg actggctaca cagctggaaa
      481 atcatcagat aaatgaaggg aaacaaaaat gaaaaaaacg ctcgcaacgt tatttttatt
      541 aacgtgtctg ggatcatcat ccgcctatgc ggataacgct ttgattttac aaactgattt
      601 tagcctgaaa gatggtg
//
LOCUS       DAJVUK010000349          598 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.354, whole genome shotgun sequence.
ACCESSION   DAJVUK010000349 DAJVUK010000000
VERSION     DAJVUK010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.354"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..598
                     /locus_tag="OQQ57_004356"
                     /pseudo
     CDS             1..598
                     /locus_tag="OQQ57_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          156 a          147 c          166 g          129 t
ORIGIN      
        1 attattttca acaggttgct ttcgctactt gatgcaaacg gctttattga ctggtctgcc
       61 accgcgctgg atggcagtaa tatccgggcg ctgaaatgtg ccgccggtgc tcaaaaaaac
      121 atcccgatat cgacggagat aatggcccgg gtcgctctcg cggcggtttt ggcaccaaaa
      181 tccatctggc aacagacgga agtggcctcc cgttaaatat cgtgctaagc cccggacaag
      241 ctcatgaaag ccagttcgcg caacgacttc tggacgggat tggcgttcag cgtcagaacg
      301 gcagcatgaa acgccgtgga catgcggtac tggctgataa agcgtattca gggcgcgcat
      361 tgcgcaacga gctgaaaaat aacggtataa aggcagtaat cccccgaaag tcaaatgaga
      421 aaatggcatc ggatggacgt gcacagcttg atcgtgatgc gtactgcaat cgtaatgtcg
      481 ttgaacggtg ctttgggcgg ctgaaagaat atcgccgcat cgccacgcgt tacgacaaaa
      541 cggcgagaaa ttacctggcg atggtgaaac tgggctgcat ccgactcttt tatcaacg
//
LOCUS       DAJVUK010000350          570 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.356, whole genome shotgun sequence.
ACCESSION   DAJVUK010000350 DAJVUK010000000
VERSION     DAJVUK010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.356"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            52..570
                     /locus_tag="OQQ57_004357"
                     /pseudo
     CDS             52..570
                     /locus_tag="OQQ57_004357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          186 a          138 c          139 g          107 t
ORIGIN      
        1 gccacctgaa cagaggtgat atgctcacct cagaacaaca caggtgctcc aatgaaaaaa
       61 agaaatttta gcgcagagtt taaacgcgaa tccgctcaac tggttgttga ccagaaatac
      121 acggtggcag atgccgccaa agctatggat gttggccttt ccacaatgac aagatgggtc
      181 aaacaactgc gtgatgagcg tcagggcaaa acaccaaaag cctctccgat aacaccagaa
      241 caaatcgaaa tacgtaagct gaggaaaaag ctacaacgca ttgaaatgga gaatgaaata
      301 ttaaaaaagg ctaccgcgct cttgatgtca gactccctga acagttctcg ataatcggga
      361 aactcagagc gcattatcct gtggtcacac tctgccaagt gttcggggtt catcgcagca
      421 gctacagata ctggaaaaac cgtcctgaaa aaccagacgg cagacgggct gtattacgca
      481 gtcaggtact tgagctacat ggcatcagcc atggttcggc cggagcaaga agcatcgcca
      541 caatggcaac ccggagaggc taccagatgg
//
LOCUS       DAJVUK010000351          565 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.357, whole genome shotgun sequence.
ACCESSION   DAJVUK010000351 DAJVUK010000000
VERSION     DAJVUK010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.357"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..>565)
                     /gene="ipaH9.8"
                     /locus_tag="OQQ57_004358"
     CDS             complement(<1..>565)
                     /gene="ipaH9.8"
                     /locus_tag="OQQ57_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH9.8"
                     /protein_id="HCS1958845.1"
                     /translation="RDEAVSRLKECLINNSDELRLDRLNLSSLPDNLPAQITLLNVSY
                     NQLTNLPELPVTLKKLYSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLTMNI
                     SYNEIVSLPSLPQALKNLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILN
                     LRNECSIDISDNPLSSHALQSLQRLTSS"
BASE COUNT          161 a           93 c          140 g          171 t
ORIGIN      
        1 gaagaggtta atctttgcag ggattgcaga gcatgggatg acaatgggtt atcactaata
       61 tctattgaac attcattcct cagattaaga atgctttccg ggatatgact tatctgattt
      121 ctatcaaaaa aatactctct gacaacggga ttatttccct cagaaaatgc tggtagctca
      181 gtgaggaaat tacgggtcgc tctgagattt ttaagagcct gtgggagcga tggtaaggag
      241 actatttcgt tatagctgat attcatagtc aataacgaat cgggtaaagc tggcaggttt
      301 tccagctcat tgtgttgtac ctgaagtgac tccagcgcag gaggtagcac gggcaattct
      361 gataatttat tgctggcgga atataatttt tttagcgtaa caggcagttc aggtaggtta
      421 gttaattgat tatatgatac attgagcagc gttatctgag ctggtaagtt gtcaggtagc
      481 gaggacagat ttaaacggtc cagtcgaagt tcatcggaat tattgataag acattcttta
      541 agtcgggaga cagcctcatc acgct
//
LOCUS       DAJVUK010000352          533 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.358, whole genome shotgun sequence.
ACCESSION   DAJVUK010000352 DAJVUK010000000
VERSION     DAJVUK010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.358"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..>533)
                     /locus_tag="OQQ57_004359"
     CDS             complement(<1..>533)
                     /locus_tag="OQQ57_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HCS1958846.1"
                     /translation="VAAGVGIENWALGVGLFDMSLSRDDVDVYSRDFSRTSQMNTNSV
                     DVRYRNIPLWDDATLSLMAKYSAPNKTDQQQDNENDNSYFEMKDSWMLTSVLRQNLQR
                     DTFNEFTLQVANNSYASSFASFSDASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDN
                     IIMANALVYSHGEDVYS"
BASE COUNT          165 a          123 c          103 g          142 t
ORIGIN      
        1 aactataaac atcttcgccg tgagaataga caagcgcgtt agccataata atattgtcag
       61 taagatacat ctcgccctga gagattaaac gccaggcgat cccattggta tgatcaccat
      121 agtaatagcg accatgcgcc atcgtattac tggcatctga gaaactggca aaactgctgg
      181 cataggaatt attggcaacc tgtaacgtaa attcattaaa cgtatcgcgt tgcaggtttt
      241 gccgtaaaac agaagtcagc atccagctat ctttcatttc aaaataactg ttgtcatttt
      301 cgttatcttg ttgttgatcc gttttattag gtgcggaata tttagccatt aatgataatg
      361 tcgcatcatc ccataacggg atattgcgat aacgaacatc cacagaattg gtattcatct
      421 ggctggtacg cgaaaaatca cgagagtaaa catcgacatc atcacggctt aaggacatat
      481 caaacagccc tacaccaagt gcccagtttt caatccccac acccgcggcg aca
//
LOCUS       DAJVUK010000353          523 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.359, whole genome shotgun sequence.
ACCESSION   DAJVUK010000353 DAJVUK010000000
VERSION     DAJVUK010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.359"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..102
                     /locus_tag="OQQ57_004360"
     CDS             <1..102
                     /locus_tag="OQQ57_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000902876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1958847.1"
                     /translation="IYAKSLQAMDFSAITDKSSYNAIEWPVSPEGSS"
     gene            126..>523
                     /locus_tag="OQQ57_004361"
     CDS             126..>523
                     /locus_tag="OQQ57_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1958848.1"
                     /translation="MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTG
                     NNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDDSKPGTLNDFLTAPDEGDLKPDV
                     VKRFEEMVAQAQQSAGAAAGNAQQTAQDVAA"
BASE COUNT          130 a          127 c          153 g          113 t
ORIGIN      
        1 atttacgcga aatcgctgca ggcgatggat ttcagcgcca tcactgataa atcctcatac
       61 aacgccattg aatggcccgt ctctccggaa ggttcttcct gatttaattt atcgcgagaa
      121 aaactatgtc tgtagtgata tcaggtgcgc tgactgatgg cgcaggcatc cccatgtccg
      181 gatgccagat tattctgaaa tcccgtgtaa acacctcaga agtggtgatg cgtaccaggg
      241 ctgatgtagt gaccggaaat aacggtgaat attcgtttga ggcacaggtc ggaaaatatt
      301 gcgtgtatct gaaacgggac tggcgcgacg agtactgtgt tggcgacatt gctgtatacg
      361 acgactcaaa gcccggcacg ctgaatgact ttctgactgc ccccgatgaa ggcgacctga
      421 agccggatgt cgtcaaacgc tttgaggaaa tggtggcgca ggcgcagcag agcgccgggg
      481 ccgcagccgg aaacgcacag cagacggcgc aggatgtggc ggc
//
LOCUS       DAJVUK010000354          517 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.360, whole genome shotgun sequence.
ACCESSION   DAJVUK010000354 DAJVUK010000000
VERSION     DAJVUK010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.360"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>517
                     /locus_tag="OQQ57_004362"
     CDS             <1..>517
                     /locus_tag="OQQ57_004362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HCS1958849.1"
                     /translation="LANAKYTAQDATTAQKGIVQLSSATNSTSETLAATSKAVKAVMD
                     ETNKKAPLNSPALTGTPTTPAARQGTNNTQIASTAFVMAAIAALVDSSPDALNTLNEL
                     AAALGNAPNFATTMTNALAGKQPKDATLTALAGLATAADRFPYFTGNDVASLATLTKV
                     GRDILAKSTVAA"
BASE COUNT          137 a          148 c          142 g           90 t
ORIGIN      
        1 cttgctaacg caaaatatac cgctcaggac gccacgacgg cacaaaaagg gatagtccag
       61 ctcagtagtg ccaccaacag cacgtctgaa acactggccg cgacatcgaa agcggttaag
      121 gcggtaatgg atgaaacgaa caagaaagcg cccttaaaca gtcctgcgct gaccggaacg
      181 ccaacaacgc cagctgcgcg acagggaacg aataataccc aaatcgcaag cacggctttc
      241 gttatggctg cgattgccgc ccttgtagat tcgtcacctg acgcactgaa tacgctgaac
      301 gagttagcgg cggcgctggg aaacgccccg aattttgcga ccaccatgac taacgcgctt
      361 gcgggtaagc aaccgaaaga tgccaccctg acggcgctgg ccgggcttgc tactgcggca
      421 gacaggtttc cgtattttac ggggaatgat gtcgccagcc tggcaaccct gacaaaagtc
      481 gggcgggata ttcttgcgaa atcgaccgtt gctgccg
//
LOCUS       DAJVUK010000355          515 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.361, whole genome shotgun sequence.
ACCESSION   DAJVUK010000355 DAJVUK010000000
VERSION     DAJVUK010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.361"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            235..515
                     /locus_tag="OQQ57_004363"
                     /pseudo
     CDS             235..515
                     /locus_tag="OQQ57_004363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001179707.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          132 a          136 c          126 g          121 t
ORIGIN      
        1 tccccgccag cccggctaag atggaggcac ggcacagccc gcacacgacg ctgaggctac
       61 agagctgaaa acccacaagg ccatgccccg catggccggg taaagcggag ccggcggcga
      121 cttcctttgt gctctgtccg ggaccggcag gaaaaaggcg gggataatga gatggtcacc
      181 cccaccctaa cagcagtacg ctgttaaggt gaatccctta acggagagac catcatacag
      241 aacatcacac ttattggtat cgatctcgga aagcattcct tccacattca ttgtcaagac
      301 aagtctggta aggctcttct gcgtaaaaaa tttacccagt actaaactga tgcagtttct
      361 ggcaacatgt ccgccctcag ttgttgtaat ggaagcctgt gcgggtgcac actttttggc
      421 tcgccgtatc tctgaatttt ggacatgaaa ctaagctgat ttctccacag ttcgttcgcc
      481 cgtttgtcaa aagtaataag aatgattttg ttgat
//
LOCUS       DAJVUK010000356          514 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.362, whole genome shotgun sequence.
ACCESSION   DAJVUK010000356 DAJVUK010000000
VERSION     DAJVUK010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.362"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..279
                     /locus_tag="OQQ57_004364"
     CDS             <1..279
                     /locus_tag="OQQ57_004364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
                     /protein_id="HCS1958850.1"
                     /translation="SLNVYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGESA
                     AIIYSLLVTCKLNGVEPEDWLREVIVKLNDWPSNRVHELLPWNFSAVK"
BASE COUNT          125 a          115 c          139 g          135 t
ORIGIN      
        1 agcctgaacg tgtactgtcg taatggccag gtggaaatcg acaacaacat cggtgaaaac
       61 gcgctgcgat cggtggcggt tggaagaaaa aattatctct tcttcggttc tgacaacggt
      121 ggagaaagcg cggcgattat ctacagtctg ctggtcacct gcaaactgaa cggagtggag
      181 ccggaggact ggttgcgcga agtgatcgtg aagctcaatg actggccgtc gaaccgagtg
      241 catgaactgc tgccctggaa cttctcagct gtaaaataat ccttccgcta cgtacttctc
      301 tgggcgctta ccactcaacg gcatcgtcaa aattatcaaa gcgcagaaca tagatttatc
      361 atgtgtttta tggatggctt tctccatcag gcatcgttcg tcacgggaaa ttggtgctat
      421 gatcggcatt gatcagtccg gttggtgatt tgttttgatt tggcgattga tcagatcgca
      481 caatccgggc tgagttccct ctaagtgatc tagg
//
LOCUS       DAJVUK010000357          499 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.363, whole genome shotgun sequence.
ACCESSION   DAJVUK010000357 DAJVUK010000000
VERSION     DAJVUK010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.363"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>499
                     /locus_tag="OQQ57_004365"
     CDS             <1..>499
                     /locus_tag="OQQ57_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1958851.1"
                     /translation="TDISHLSEGHRVTVHYRYDEKGRLTGERQTVHHPQPEALLWQHE
                     TRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETLRRF
                     GRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLT
                     GVHTTA"
BASE COUNT          114 a          169 c          147 g           69 t
ORIGIN      
        1 acagacatca gccatctcag cgaagggcac cgggtgacgg tgcattacag gtatgatgag
       61 aaaggccggc tgaccggtga gcgccagacg gtgcatcacc cgcagccgga agcactgctc
      121 tggcagcatg agaccagaca tgcgtacaac gcgcagggac tggcgaaccg ctgtataccg
      181 gacagcctgc ccgccgtgga atggctgacc tacggcagcg gctggctggc aggtatgaag
      241 ctcggcgaca caccgctggt ggatttcacc cgcgaccgcc tgcaccggga aacgctgcgc
      301 cgcttcggcc gttatgaact ctccaccgct tacacccctg ccgggcagtt acagagccag
      361 cacctgaaca gcctgcagta tgaccgcgat tacacctgga acgacaacgg cgaactcatc
      421 cgcatcagca gcccgcgcca gacccggagt tacagctaca gcaccaccgg caggctgacc
      481 ggcgttcaca ccaccgcag
//
LOCUS       DAJVUK010000358          490 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.365, whole genome shotgun sequence.
ACCESSION   DAJVUK010000358 DAJVUK010000000
VERSION     DAJVUK010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.365"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            141..>490
                     /locus_tag="OQQ57_004366"
     CDS             141..>490
                     /locus_tag="OQQ57_004366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1958852.1"
                     /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR
                     VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFG
                     SVFFGNSKGTLNND"
BASE COUNT          137 a           93 c          108 g          152 t
ORIGIN      
        1 cctaatgaac aatggttgta aattttggta acaaatatca ttgctcatta atatctagca
       61 tctgcttata acatttgtgt catgaatagt cattcttcaa accagtagtc tgactaatgg
      121 aattttattc aaggattttt atgtctaaaa aattaggttt tgccctgtct ggtcttatgc
      181 tggcaatggt tgcaggtact gcttctgctg atatggatgg tggtcagtta aatatcagtg
      241 gtctggttgt tgataacacc tgtgaaaccc gcgttgacgg cggtaataaa gatggtctga
      301 tcctgctgca aactgcaact gttggtgaaa tcgatgctgg cgtgctgaat gacaccgttg
      361 gcgctaaagc caaacctttc agcatcaccg ttgactgcag caaagcaaat ccgaatccag
      421 gtagtacagc taaaatgacc ttcggttctg ttttctttgg taatagcaaa ggaacgctga
      481 acaacgacat
//
LOCUS       DAJVUK010000359          480 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.366, whole genome shotgun sequence.
ACCESSION   DAJVUK010000359 DAJVUK010000000
VERSION     DAJVUK010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.366"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..83
                     /locus_tag="OQQ57_004367"
     CDS             <1..83
                     /locus_tag="OQQ57_004367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309792.1"
                     /note="The transcriptional repressor of DicA (divison
                     cell) has a hypothetical DNA binding domain. It represses
                     the transcription of dicB and dicC, but its specific role
                     in cellular replication and mode of action are still
                     unknown; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1958853.1"
                     /translation="EMRARVENFNKLFEELLKARKRSANK"
     gene            286..438
                     /locus_tag="OQQ57_004368"
     CDS             286..438
                     /locus_tag="OQQ57_004368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 family protein"
                     /protein_id="HCS1958854.1"
                     /translation="MDTIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTEAGARRW
                     LAKNTS"
BASE COUNT          155 a          113 c           83 g          129 t
ORIGIN      
        1 cagagatgcg tgctcgagtt gaaaatttca acaaactttt tgaagaacta ctcaaagctc
       61 gcaaaagaag cgcaaacaaa taatcccctt ttttctccac accctgtaat aaaaagcaca
      121 aactttcaaa cacttgtgtt ttttacatca aaaaaactta ggtttttata cataaaatct
      181 tgactccacg tcttaggtta ttctaaattt cattcatcaa gacaccgcac ggtgttctca
      241 gcaaacagtt ccactacccc ggcgttaagg ggaaatgagg tcagcatgga tactatcgat
      301 cttggcaaca acgaatccct agtgtgtggc gtgtttccca atcaggacgg cacattcacc
      361 gccatgacgt ataccaaaag caaaacgttt aaaaccgaag ctggcgcacg tcgctggctt
      421 gccaaaaata ccagctaatc catttattgg attaattcaa tattctcgct gtagaggtat
//
LOCUS       DAJVUK010000360          476 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.367, whole genome shotgun sequence.
ACCESSION   DAJVUK010000360 DAJVUK010000000
VERSION     DAJVUK010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.367"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..254
                     /gene="tnpA"
                     /locus_tag="OQQ57_004369"
     CDS             <1..254
                     /gene="tnpA"
                     /locus_tag="OQQ57_004369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HCS1958855.1"
                     /translation="DATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAIS
                     SLVNSLKGVLWSPGYFASSCGGAPISVIRQYIEQQQTPG"
BASE COUNT          140 a          119 c           96 g          121 t
ORIGIN      
        1 atgacgcgac agaaaaacta cgcacttact tttcaaatgt atgtgctgat tttgaagctg
       61 aactggttga aatggatggc gaaccagatc acgtccattt gttaattaac tatcctccca
      121 aactggcaat atccagtctg gtaaacagcc tcaaaggcgt tttgtggagt cctggctatt
      181 ttgccagtag ctgcggaggt gcgccaatat ccgtcatccg ccaatacatt gaacaacagc
      241 aaacacctgg ttaggtggaa aaccacgcct tatatccctg ccctgaagga cggggtttta
      301 cggcgcaccg gataagcctg gagattatct acaccagcat ggacatcatt gtactatgcc
      361 ccgtacatgc cccatcacat cctcaacatc aaagtattag agccttgcaa accattatgc
      421 gtctcagttt gtctcatcta tcttacgcaa aaaaaaatag aactaatatc aagcgg
//
LOCUS       DAJVUK010000361          448 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.368, whole genome shotgun sequence.
ACCESSION   DAJVUK010000361 DAJVUK010000000
VERSION     DAJVUK010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.368"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(64..>448)
                     /locus_tag="OQQ57_004370"
     CDS             complement(64..>448)
                     /locus_tag="OQQ57_004370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1958856.1"
                     /translation="SLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATKMLFSHAQKT
                     LAWDAFAFTEVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQLVSLPDFSHY
                     ELYDKPEAVQEALEKVIPFFNPHLG"
BASE COUNT          114 a          117 c           98 g          119 t
ORIGIN      
        1 ggcgggctat ctgaccgcca gcaccaagaa tcagtacatt tttcataata tttctcatga
       61 aacttatccc agatgggggt tgaaaaaagg aataactttt tccagcgcct cctgaactgc
      121 ttccggtttg tcatacagtt cataatgtga gaaatcgggt aatgaaacta actgacgatc
      181 ctgcgaaacc atcgcccggc catagacttc cagtccatca cgataagcac cgaaggcacc
      241 gactttttca ccaacgacta ccatcaccgg ctgagtcagt aacacttcag taaatgcgaa
      301 ggcatcccag gccagcgttt tctgtgcatg tgagaacaac atttttgtcg cacctcccgg
      361 ttgttgcccg cgtggtgttt tatagtagtc agttgcttca taaacatcgc gttcggtcag
      421 tccatgggct tttgctgcat ccaggctg
//
LOCUS       DAJVUK010000362          447 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.369, whole genome shotgun sequence.
ACCESSION   DAJVUK010000362 DAJVUK010000000
VERSION     DAJVUK010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.369"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            35..447
                     /locus_tag="OQQ57_004371"
                     /pseudo
     CDS             35..447
                     /locus_tag="OQQ57_004371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          101 a          115 c          121 g          110 t
ORIGIN      
        1 atttagtgta tgatggtgat tttaaggtgc ttgcgtggct tccatttcca tcagatgtcc
       61 ttcctgctcc gctactgaag gcgtggtgcg taacggcaaa agcactgccg gacatcagcg
      121 ctatctctgc tctcattgcc gtaaaacatg gcaactacag ttcacttaca ccgcctctca
      181 gcccggtacg caccagaaaa tcattgatat ggccatgaat ggcgtcggat gtcgcgccag
      241 tgcacgcatt atgggcgttg gcctcaacac ggttttacgt cacttaaaaa actcaggccg
      301 cagtcggtaa cctcgcgcat acaaccgggc agtgatgtga ttgtctgcgc tgaaatggac
      361 gaacagtggg gctacgtcgg tgctaaatca cgtcagcgct ggctgtttta cgcgtatgac
      421 aggatacgga ggacggttgt ggcgcac
//
LOCUS       DAJVUK010000363          436 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.371, whole genome shotgun sequence.
ACCESSION   DAJVUK010000363 DAJVUK010000000
VERSION     DAJVUK010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.371"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>436
                     /locus_tag="OQQ57_004372"
     CDS             <1..>436
                     /locus_tag="OQQ57_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1958857.1"
                     /translation="RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS
                     LSRKPEVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA
                     DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR"
BASE COUNT           93 a          123 c          152 g           68 t
ORIGIN      
        1 accggctggt gcactacacg cggacacaat atgcagagcc gctggtcgaa agtcgctatc
       61 tttacgaccc gctgggccgc agggtggcaa aacgggtgtg gcggcgtgaa cgtgacctga
      121 cgggctggat gtcgctgtca cggaaaccgg aagtgacctg gtacggctgg gacggcgacc
      181 ggctgaccac gatacagaac gacaggagcc gcatccagac gatttatcag ccggggagct
      241 tcacgccact catcagagtt gaaaccgcca ccggtgagct ggcgaaaacg cagcgccgca
      301 gcctggcgga tacccttcag cagtccggcg gcgaagacgg tggcagtgtg gtgttcccgc
      361 cggtgctggt gcagatgctc gaccggctgg aaagtgaaat cctggctgac cgggtgagtg
      421 aggaaagccg ccgctg
//
LOCUS       DAJVUK010000364          435 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.372, whole genome shotgun sequence.
ACCESSION   DAJVUK010000364 DAJVUK010000000
VERSION     DAJVUK010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.372"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
BASE COUNT          171 a           62 c           82 g          120 t
ORIGIN      
        1 caacatgaaa agaaccatat atgataatta ttataataac ggctttaatt ggaatacata
       61 tattacaacg tattatatat aattggtatt ctgggaacta tattctcaaa atacagtaga
      121 aacgaggtat gtttctggtg gaaaggacag tgggattaaa aagtaagaat tgataaaaaa
      181 acgccagcaa cacatagtgc cggcggaggg aataccccat ggagaaaatg tgatgcctag
      241 agcaccatga atatataatt aaaaatagtt agagttgtca atactttcac aaaaataatt
      301 ttcgtagttt cgtagtatag aaagatattt ttatgcatga cctacctgaa tttgctccgg
      361 gtagaggtta taaataaaaa ttgaatcacg acaaacacaa tattcatagt atggcgatgc
      421 ctacgccagc aagaa
//
LOCUS       DAJVUK010000365          433 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.373, whole genome shotgun sequence.
ACCESSION   DAJVUK010000365 DAJVUK010000000
VERSION     DAJVUK010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.373"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..389)
                     /locus_tag="OQQ57_004373"
     CDS             complement(<1..389)
                     /locus_tag="OQQ57_004373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
                     /protein_id="HCS1958858.1"
                     /translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
                     SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
                     QRLGSEAVRRVFTKTAQLWHNATPHPH"
BASE COUNT          110 a          109 c          131 g           83 t
ORIGIN      
        1 cagtgcggat gcggcgtggc gttatgccag agctgcgctg ttttcgtgaa cacgcggcgg
       61 acagcctcac ttcccaggcg ctggcgggcc tgaataacgg cactgggggc aacgaagggg
      121 cgattgcccg gcagcatgat gtccaggcga ttcacaatct ggtgaagagg ttctttacgc
      181 tcaagcgcca tgccaacaat acaccagacc atcatttcga ggggaagacg gcgcttgcgt
      241 agcgttacag tacctgattc ggcaaggcaa cgagagatga gttcggggtc gaggtaatcc
      301 cccagagaag tcagtgggtt acgcagagaa tcgtaacggg ataccagatc aagagcctgt
      361 ccaatgtgca taaaaaaatc cggaaacaag tgagcgtttc cggattctta cacagccact
      421 ggatcggtca act
//
LOCUS       DAJVUK010000366          416 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.374, whole genome shotgun sequence.
ACCESSION   DAJVUK010000366 DAJVUK010000000
VERSION     DAJVUK010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.374"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            92..416
                     /locus_tag="OQQ57_004374"
                     /pseudo
     CDS             92..416
                     /locus_tag="OQQ57_004374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502602.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          139 a           75 c           92 g          110 t
ORIGIN      
        1 gctgataatg aattgtgaat aatcaaactg acctctaatt atcctgtatg gagtagtgct
       61 tattttcgac tcaatttcta ctgattagat tatggttatc agtacagtgg gttatgaaaa
      121 acggactgga tctgccagca gtgcttctat tattattcaa aaagaacttc agccggacaa
      181 tgctataatc cagggaaagg ctataagctc tgttggacgg aatgtggaaa tcagcactgg
      241 taaaaagggg aactgacatt aacacaagaa ggattcctgc aagcaactgc ttatctgtcc
      301 ggaacgcaga attaaagcat gaccacacag gagccagaat actgtggtcg tacgcattca
      361 gtattgtgac aactaataga aataaaaatc tggccggtgc gaatattaaa cgatgc
//
LOCUS       DAJVUK010000367          410 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.375, whole genome shotgun sequence.
ACCESSION   DAJVUK010000367 DAJVUK010000000
VERSION     DAJVUK010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.375"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>410
                     /locus_tag="OQQ57_004375"
     CDS             <1..>410
                     /locus_tag="OQQ57_004375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCS1958859.1"
                     /translation="HEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIV
                     GRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTY
                     VATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELT"
BASE COUNT          117 a          104 c          114 g           75 t
ORIGIN      
        1 catgaaccct cagacagaaa acaaagtgat gagcggctaa aactggagat taaggtggca
       61 catatccgca ctcgcgaaac atatggaacc cggcggctcc agacggagct ggcagagaat
      121 ggcatcatcg ttggtcgtga ccgactggca cgtcttcgta aggagctaag gctacgctgt
      181 aagcagaaac gcaagttcag agcgactacg aacccgaacc acaatctgcc agttgcgcca
      241 aatctgctga accagacgtt cgctcctaca gcaccaaatc aggtctgggt ggcggacctg
      301 acgtatgttg ccacacagga gggatggttg tacctcgctg gcatcaaaga tgtttatacg
      361 tgcgaaattg tcggctacgc catgggagag cgcatgacaa aagagctgac
//
LOCUS       DAJVUK010000368          410 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.376, whole genome shotgun sequence.
ACCESSION   DAJVUK010000368 DAJVUK010000000
VERSION     DAJVUK010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.376"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            46..410
                     /locus_tag="OQQ57_004376"
                     /pseudo
     CDS             46..410
                     /locus_tag="OQQ57_004376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611947.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          112 a           88 c          103 g          107 t
ORIGIN      
        1 tactgcaccc attttgttgg acgatgaaat ggaatagccc ctaatatgtc aaagccaaaa
       61 tacccttttg aaaagcgcct tgaagtcgtg aatcactact tcactactga tgatggttac
      121 aggatcatct cggcacgttt tggtgtcccc gaacccaggt caggacatgg gttgccctct
      181 atgaaaaaca tggagaaaaa ggcttaattc ccaaacctaa aggtgttagt gctgatccag
      241 agttgcgtat taaggtcgtg aaagctgtga ttgagcagca catgtccctt aatcaggctg
      301 ctgctcactt tatgcttgct ggtagtggtt ctgtagccag gtggctgaag gtttatgaag
      361 agcgcggaga agctggttta cgcgcgctca agattggcac caaaagaaac
//
LOCUS       DAJVUK010000369          409 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.377, whole genome shotgun sequence.
ACCESSION   DAJVUK010000369 DAJVUK010000000
VERSION     DAJVUK010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.377"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            25..324
                     /locus_tag="OQQ57_004377"
     CDS             25..324
                     /locus_tag="OQQ57_004377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1958860.1"
                     /translation="MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVMIKGVEERRVTY
                     RREGYEYDCVMPVYQFRRDFSLVQTAPHNVPTSNARARANIQKLKTMINGFRGKK"
BASE COUNT          125 a           97 c          102 g           85 t
ORIGIN      
        1 acagcacacc ggagaataaa aataatgaaa cttaaatatt ctggcttaac tgccagtggc
       61 aacactcacc ctaaatttac gcgcggtgat atttaccgcg accagtacgg cggcacggta
      121 atgattaagg gcgtggaaga acggcgtgta acctaccgcc gtgaaggtta cgaatatgat
      181 tgcgtgatgc ctgtttatca gttccggcgt gatttttctc tggtacagac cgcgccgcat
      241 aacgtgccca ccagcaacgc cagggcacgg gcaaacatcc agaagctgaa aaccatgatt
      301 aacggattca ggggcaagaa atgaaaagcg caccgaactt aaaaaaacag ccttacgaca
      361 agatgaccga agtcattatt tttgcgggta gtgatgcctg ggcacatgc
//
LOCUS       DAJVUK010000370          409 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.378, whole genome shotgun sequence.
ACCESSION   DAJVUK010000370 DAJVUK010000000
VERSION     DAJVUK010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.378"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..386
                     /locus_tag="OQQ57_004378"
     rRNA            <1..386
                     /locus_tag="OQQ57_004378"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          108 a           99 c          118 g           84 t
ORIGIN      
        1 actgccagtg ataaactgga ggaaggtggg gacgacgtca agtcatcatg gcccttacga
       61 ccagggctac acacgtgcta caatggcgca tacaaagaga agcgacctcg cgagagcaag
      121 cggacctcat aaagtgcgtc gtagtccgga ttggagtctg caactcgact ccatgaagtc
      181 ggaatcgcta gtaatcgtgg atcagaatgc cacggtgaat acgttcccgg gccttgtaca
      241 caccgcccgt cacaccatgg gagtgggttg caaaagaagt aggtagctta accttcggga
      301 gggcgcttac cactttgtga ttcatgactg gggtgaagtc gtaacaaggt aaccgtaggg
      361 gaacctgcgg ttggatcacc tccttacctt aaagaagcgt actttgcag
//
LOCUS       DAJVUK010000371          407 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.379, whole genome shotgun sequence.
ACCESSION   DAJVUK010000371 DAJVUK010000000
VERSION     DAJVUK010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.379"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..142)
                     /locus_tag="OQQ57_004379"
     CDS             complement(<1..142)
                     /locus_tag="OQQ57_004379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="B-type di-heme cytochrome with a major
                     alpha-absorption peak at 561 nm and a minor peak at 555
                     nm; Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HCS1958861.1"
                     /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI
                     HVS"
     gene            331..>407
                     /locus_tag="OQQ57_004380"
     CDS             331..>407
                     /locus_tag="OQQ57_004380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HCS1958862.1"
                     /translation="MSKVGINGFGRIGRLVLRRLLEVKS"
BASE COUNT          119 a           85 c           85 g          118 t
ORIGIN      
        1 aggaaacatg aatcatgttg atgagtggcc gatcgctacg tgggaagaaa ccccgaaact
       61 ccattgcgca atacgctgcg ataaccagca aaaagaccag ccagtgaatg ctgatttgta
      121 accttgagta tttattttcc ataacatttc ctgctttaac ataattttcc gttaacataa
      181 cgggcttttc tcaaaatttc attaaatatt gttcacccgt tttcagtacg ttacgtttca
      241 ctgtaagaat ggagattgcc catcccacaa tcctgggcta agcctggaaa ggatcaattt
      301 tcatccgaac gttcctgaca ggagaaaacc atgagtaagg ttggtattaa cggttttggt
      361 cgtatcggtc gactggtgtt gcgtcgatta cttgaagtca aaagcaa
//
LOCUS       DAJVUK010000372          374 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.381, whole genome shotgun sequence.
ACCESSION   DAJVUK010000372 DAJVUK010000000
VERSION     DAJVUK010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.381"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..313
                     /locus_tag="OQQ57_004381"
     CDS             <1..313
                     /locus_tag="OQQ57_004381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HCS1958863.1"
                     /translation="QYTRNSFYIPLMTRLRPMGITVYVETANRHGLRWLHDVANQRKH
                     ETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVNFDKHPLHHPLSIYDSFCRGV
                     A"
     gene            310..>374
                     /locus_tag="OQQ57_004382"
     CDS             310..>374
                     /locus_tag="OQQ57_004382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1958864.1"
                     /translation="MMMELQHQRLMALAGQLQLESL"
BASE COUNT           96 a          111 c           92 g           75 t
ORIGIN      
        1 gcagtacacc cgtaacagtt tttacatccc actaatgact cgcctgcgcc cgatggggat
       61 cactgtctat gttgaaacag ccaaccgcca cggtctgcgc tggctgcacg atgtcgctaa
      121 ccaacgaaag catgaaacaa tccaggcccg tccctgcgat cgctggctcg aagagcagca
      181 gtccatgctg gcactgcctc cggagaaaaa agagtatgac gtgcatcctg gtgaaaatct
      241 ggtgaacttc gataaacacc ccctgcatca tccactctcc atctacgact cattctgcag
      301 aggagtggcg tgatgatgga actgcaacat caacgactga tggcgctcgc cgggcagttg
      361 caactggaaa gcct
//
LOCUS       DAJVUK010000373          368 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.382, whole genome shotgun sequence.
ACCESSION   DAJVUK010000373 DAJVUK010000000
VERSION     DAJVUK010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.382"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>368
                     /locus_tag="OQQ57_004383"
     CDS             <1..>368
                     /locus_tag="OQQ57_004383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1958865.1"
                     /translation="SDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAA
                     WLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGAL
                     LSLGREMFRLEILEDIARDKV"
BASE COUNT           80 a          106 c           92 g           90 t
ORIGIN      
        1 tctgatgtat cacagatatg gcatgctttt gaacatgaag agcacgccaa caccttttcc
       61 gcgttccttg accgcctttc cgataccgtc tctgcacgca atacctccgg attccgtgaa
      121 caggtcgctg catggctgga aaaactcagt gcctctgcgg agcttcgaca gcagtctttc
      181 gctgttgctg ctgatgccac tgagagctgt gaggaccgtg tcgcgctcac atggaacaat
      241 ctccggaaaa ccctcctggt ccatcaggca tcagaaggcc ttttcgataa tgataccggc
      301 gctctgctct ccctgggcag ggaaatgttc cgcctcgaaa ttctggagga cattgcccgg
      361 gataaagt
//
LOCUS       DAJVUK010000374          348 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.383, whole genome shotgun sequence.
ACCESSION   DAJVUK010000374 DAJVUK010000000
VERSION     DAJVUK010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.383"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>348
                     /locus_tag="OQQ57_004384"
     CDS             <1..>348
                     /locus_tag="OQQ57_004384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958866.1"
                     /translation="AMLLCKWGFYLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYL
                     LIMMGLIVRAGFKAKKEQLHYYQAKGIEPLSIEKLQALQLITPYRFYHKQWSETLEFW
                     PRKPEPGKDTFQYH"
BASE COUNT           94 a           67 c           81 g          106 t
ORIGIN      
        1 gccatgctgc tttgtaagtg ggggttttat ttaacatgtg ttgtcgctgt aatgtttgtg
       61 ttcgcagcga taacatccaa cggtttgaat gaaagaggcc tgattaccgc gggatgctct
      121 tttctttatc tattaattat gatggggctt attgttcggg ccggttttaa agcaaaaaaa
      181 gaacaactgc attattatca ggctaaaggt attgagccgc tcagtatcga gaagttacag
      241 gcgctacaat tgatcacacc ttatcgattc tatcataagc aatggtctga aacgctggag
      301 ttctggccgc gaaagcctga acctggcaaa gataccttcc aatatcat
//
LOCUS       DAJVUK010000375          342 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.385, whole genome shotgun sequence.
ACCESSION   DAJVUK010000375 DAJVUK010000000
VERSION     DAJVUK010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.385"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..220
                     /locus_tag="OQQ57_004385"
                     /pseudo
     CDS             1..220
                     /locus_tag="OQQ57_004385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001391646.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            268..>342
                     /locus_tag="OQQ57_004386"
     CDS             268..>342
                     /locus_tag="OQQ57_004386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001441976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HCS1958867.1"
                     /translation="MNDLPVRQTPMFTLLREAGFSSSPQ"
BASE COUNT           73 a           95 c           99 g           75 t
ORIGIN      
        1 acaccagtgg cgctctctgc caacgatccg gctaatgtgt ggggaaatct tctgccctgg
       61 cctgcacatc cggcaacgct ggttccaacg cgtcgggcgg gtgcgctggt ggtcgtttct
      121 agcggcaaat tgttactcta tctggcgcaa ggtggcaaaa aaatgctggt ctggcaggaa
      181 aaagaggaat tactcgcccc agaggttttc cacgcgctga ctaccgcact gcgtcgcgaa
      241 ccacggctgc gctttacgct aacagaagtg aatgatctac cggtccggca aacgccgatg
      301 tttacgctgc tgcgtgaggc gggattttca agttcgccac aa
//
LOCUS       DAJVUK010000376          326 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.387, whole genome shotgun sequence.
ACCESSION   DAJVUK010000376 DAJVUK010000000
VERSION     DAJVUK010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.387"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>326
                     /locus_tag="OQQ57_004387"
     CDS             <1..>326
                     /locus_tag="OQQ57_004387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HCS1958868.1"
                     /translation="EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACML
                     GGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMD
                     PKRMIEA"
BASE COUNT           74 a           85 c           97 g           70 t
ORIGIN      
        1 gaatatccgc aatccgcagc catcgacctg cgttgcgtaa atatggttgc cgatctgtgg
       61 catgcgcctg cgccgaaaaa tggtcaggcc gttggcacca acaccattgg ttcttccgag
      121 gcctgtatgc tcggcgggat ggcgatgaaa tggcgttggc gcaagcgtat ggaagctgca
      181 ggcaaaccaa cggataaacc aaacctggtg tgcggtccgg tacaaatctg ctggcataaa
      241 ttcgcccgct actgggatgt ggagctgcgt gagatcccta tgcgccccgg tcagttgttt
      301 atggacccga aacgcatgat tgaagc
//
LOCUS       DAJVUK010000377          317 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.388, whole genome shotgun sequence.
ACCESSION   DAJVUK010000377 DAJVUK010000000
VERSION     DAJVUK010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.388"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>317
                     /locus_tag="OQQ57_004388"
     CDS             <1..>317
                     /locus_tag="OQQ57_004388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HCS1958869.1"
                     /translation="KQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHL
                     KGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPR
                     VVK"
BASE COUNT           93 a           56 c          100 g           68 t
ORIGIN      
        1 aaacagacga tgcaactgag caggctgacg ctgagaagta aaaagccgga gcttgtggag
       61 caagagctgt ggggtgtctt actggcttat aatctggtga gatatcagat gattaaaatg
      121 gcggaacatc tgaaaggtta ctggccgaat caactgagtt tctcagaatc atgcggaatg
      181 gtgatgagaa tgctgatgac attgcagggc gcttcaccgg gacgtatacc ggagctgatg
      241 cgcgatcttg caagtatggg acaacttgtg aaattaccga cgagaagggg aagggccttc
      301 ccgagagtgg taaagga
//
LOCUS       DAJVUK010000378          309 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.390, whole genome shotgun sequence.
ACCESSION   DAJVUK010000378 DAJVUK010000000
VERSION     DAJVUK010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.390"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..>309
                     /locus_tag="OQQ57_004389"
     CDS             <1..>309
                     /locus_tag="OQQ57_004389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HCS1958870.1"
                     /translation="SFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQL
                     LWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYS
                     A"
BASE COUNT           78 a           73 c           98 g           60 t
ORIGIN      
        1 gtcgttctcg ccggacagca ggctcaccat gaaagcgctg gaaatggcat gggaaacccg
       61 tggtaagccc ggcggggtga tgttccacag cgatcagggc agtcattata cgagcaggca
      121 gttccggcag ttattgtggc gataccagat cagacagagt atgagccggc gcggaaactg
      181 ctgggataac agcccaatgg aacgcttctt caggagtctg aagaacgaat ggatgccggt
      241 ggtgggttac gtaagcttca gcgaggcagc tcacgccata acggactata tcgttggata
      301 ttacagcgc
//
LOCUS       DAJVUK010000379          304 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.391, whole genome shotgun sequence.
ACCESSION   DAJVUK010000379 DAJVUK010000000
VERSION     DAJVUK010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.391"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..304
                     /locus_tag="OQQ57_004390"
                     /pseudo
     CDS             1..304
                     /locus_tag="OQQ57_004390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS1-like element IS1A family transposase"
BASE COUNT           61 a           79 c           95 g           69 t
ORIGIN      
        1 ccatgaatgg cgttggatgc cgggcaactg cacgcattat gggcgttggc ctcaacacga
       61 ttttacgtca cttaaaaaac tcaggccgca gtcggtaacc tcgcgcatac agccgggcag
      121 tgacgtcatc gtctgcgcgg aaatggacga acagtggggc tatgtcgggg ctaaatcgcg
      181 ccagcgctgg ctgttttacg cgtatgacag tctccggaag acggttgttg cgcacgtatt
      241 cggtgaacgc actatggcga cgctggggcg tcttatgagc ctgctgtcac cctttgacgt
      301 ggtg
//
LOCUS       DAJVUK010000380          295 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.denovo.392, whole genome shotgun sequence.
ACCESSION   DAJVUK010000380 DAJVUK010000000
VERSION     DAJVUK010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.denovo.392"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            complement(<1..>295)
                     /locus_tag="OQQ57_004391"
     CDS             complement(<1..>295)
                     /locus_tag="OQQ57_004391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1958871.1"
                     /translation="SVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESL
                     KKFEELAQQAQQSAGSAAGNARQTAQDMTAAATARDDAQRFAEKARQDATVTAE"
BASE COUNT           49 a           89 c           80 g           77 t
ORIGIN      
        1 ctcagctgtg acggttgcat cctgtcgggc tttctccgca aaacgttgtg catcatcacg
       61 ggccgttgcg gctgccgtca tatcctgcgc cgtctgccgt gcgtttccgg ctgcgctccc
      121 ggcactctgc tgcgcctgtt gcgccagctc ttcgaatttc ttcagggatt ccggacgcag
      181 gtcaatatta gttgcgccca gaaaatcatt cagcgaaccg tccgttgaat cttcataaac
      241 gcggatgaca ccgatttctg aaaggcgccg tgtgctttgt gtcaggcgaa cgctg
//
LOCUS       DAJVUK010000381         5654 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.guided.207, whole genome shotgun sequence.
ACCESSION   DAJVUK010000381 DAJVUK010000000
VERSION     DAJVUK010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5654
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.guided.207"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            556..1371
                     /gene="sul2"
                     /locus_tag="OQQ57_004392"
     CDS             556..1371
                     /gene="sul2"
                     /locus_tag="OQQ57_004392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HCS1958872.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1432..1959
                     /locus_tag="OQQ57_004393"
                     /pseudo
     CDS             1432..1959
                     /locus_tag="OQQ57_004393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
     gene            1980..2453
                     /locus_tag="OQQ57_004394"
     CDS             1980..2453
                     /locus_tag="OQQ57_004394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA14"
                     /protein_id="HCS1958873.1"
                     /translation="MKVSLIAAKAKNGVIGCGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSGWTSNDDNVVVFQSIEEAMDRLAEFTGHVIVSGGGEI
                     YRETLPMASTLHLSTIDIEPEGDVFFPSIPNTFEVVFEQHFTSNINYCYQIWKKG"
     gene            2528..2803
                     /locus_tag="OQQ57_004395"
                     /pseudo
     CDS             2528..2803
                     /locus_tag="OQQ57_004395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase APH(3')"
     gene            2803..3639
                     /locus_tag="OQQ57_004396"
     CDS             2803..3639
                     /locus_tag="OQQ57_004396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCS1958874.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(3746..4150)
                     /locus_tag="OQQ57_004397"
                     /pseudo
     CDS             complement(3746..4150)
                     /locus_tag="OQQ57_004397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            complement(4194..4583)
                     /locus_tag="OQQ57_004398"
     CDS             complement(4194..4583)
                     /locus_tag="OQQ57_004398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958875.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            4801..5241
                     /locus_tag="OQQ57_004399"
     CDS             4801..5241
                     /locus_tag="OQQ57_004399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001749639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HCS1958876.1"
                     /translation="MAWHTVQETLKLTGKSRSQLYRDMAKGLVSYRTGKNDRREFETS
                     ELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKLDALQQTVTLMLEDKMA
                     REAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSGSE"
BASE COUNT         1371 a         1484 c         1481 g         1318 t
ORIGIN      
        1 aacccggaaa gacacgacaa aacgccactg gcagcagcca ttagtaacag gagtgcacga
       61 gaagatagat taagaggtct tgaagtagag gcctgactgc ggctacactg aaagaacagt
      121 tttggtaatg gcggtctcgt gaaccctgtt accgggttaa gcagttcccc aactgactta
      181 accttcgaac aaaccgcctc cccaggcggt tttttcgttt acagagcaag agattacgat
      241 tcattgaaaa ggatctcaag aagatccttt gtagattact atcaattaat cttccgaaca
      301 tgacaccagt cactgttgat tacggttaaa ccgctccgta acaggtttcc ctcgtattgg
      361 tgacttgcag caccaaagaa gcaaaaaaga taaatatatc tacttattga gagatgatat
      421 atttatttcc aaaatgctac agatacatca tcatgaaacg gatcaccgca aacaggttac
      481 tcgcctgggg attccctttc gacccgagca tccgtatgag actcatgctc gattattatt
      541 attatagaag cccccatgaa taaatcgctc atcattttcg gcatcgtcaa cataacctcg
      601 gacagtttct ccgatggagg ccggtatctg gcgccagacg cagccattgc gcaggcgcgt
      661 aagctgatgg ccgagggggc agatgtgatc gacctcggtc cggcatccag caatcccgac
      721 gccgcgcctg tttcgtccga cacagaaatc gcgcgtatcg cgccggtgct ggacgcgctc
      781 aaggcagatg gcattcccgt ctcgctcgac agttatcaac ccgcgacgca agcctatgcc
      841 ttgtcgcgtg gtgtggccta tctcaatgat attcgcggtt ttccagacgc tgcgttctat
      901 ccgcaattgg cgaaatcatc tgccaaactc gtcgttatgc attcggtgca agacgggcag
      961 gcagatcggc gcgaggcacc cgctggcgac atcatggatc acattgcggc gttctttgac
     1021 gcgcgcatcg cggcgctgac gggtgccggt atcaaacgca accgccttgt ccttgatccc
     1081 ggcatggggt tttttctggg ggctgctccc gaaacctcgc tctcggtgct ggcgcggttc
     1141 gatgaattgc ggctgcgctt cgatttgccg gtgcttctgt ctgtttcgcg caaatccttt
     1201 ctgcgcgcgc tcacaggccg tggtccgggg gatgtcgggg ccgcgacact cgctgcagag
     1261 cttgccgccg ccgcaggtgg agctgacttc atccgcacac acgagccgcg ccccttgcgc
     1321 gacgggctgg cggtattggc ggcgctgaaa gaaaccgcaa gaattcgtta actgcacatt
     1381 cgggatattt ctctatattc gcgcttcatc agaaaactga aggaacctcc attgaatcga
     1441 actaatattt tttttggtga atcgcattct gactggttgc ctgtcagagg cggagaatct
     1501 ggtgattttg tttttcgacg tggtgacggg catgccttcg cgaaaatcgc acctgcttcc
     1561 cgccgcggtg agctcgctgg agagcgtgac cgcctcattt ggctcaaagg tcgaggtgtg
     1621 gcttgccccg aggtcatcaa ctggcaggag gaacaggagg gtgcatgctt ggtgataacg
     1681 gcaattccgg gagtaccggc ggctgatctg tctggagcgg atttgctcaa agcgtggccg
     1741 tcaatggggc agcaacttgg cgctgttcac agcctatcgg ttgatcaatg tccgtttgag
     1801 cgcaggctgt cgcgaatgtt cggacgcgcc gttgatgtgg tgtcccgcaa tgccgtcaat
     1861 cccgacttct taccggacga ggacaagagt acgccgcagc tcgatctttt ggctcgtgtc
     1921 gaacgagagc taccggtgcg gctcgaccaa gagcgcaccg ttaacccagg atgagaacct
     1981 tgaaagtatc attgatagct gcgaaagcga aaaacggcgt gattggttgc ggtccagaca
     2041 taccctggtc cgcgaaaggg gagcagctac tttttaaagc attgacctac aatcagtggc
     2101 ttctggtggg tcgcaagacg tttgaatcta tgggcgcact ccccaatagg aaatacgcgg
     2161 tcgttacccg ctcaggttgg acatcaaatg atgacaatgt agttgtattt cagtcaatcg
     2221 aagaggccat ggacaggcta gctgaattca ccggtcacgt tatagtgtct ggtggcggag
     2281 aaatttaccg agaaacatta cccatggcct ctacgctcca cttatcgacg atcgacatcg
     2341 agccagaggg ggatgttttc ttcccgagta ttccaaatac cttcgaagtt gtttttgagc
     2401 aacactttac ttcaaacatt aactattgct atcaaatttg gaaaaagggt taacaaagct
     2461 atgcaatcga cggcaaaaag cttcgttcgc ttcgcgcact acgccttttt ccgcgattga
     2521 tagcgacgat atggttgttt gccatggtga tccctgcatg ccgaacttca tggtggaccc
     2581 taaaactctt caatgcacgg gtctgatcga ccttgggcgg ctcggaacag cagatcgcta
     2641 tgccgatttg gcactcatga ttgctaacgc cgaagagaac tgggcagcgc cagatgaagc
     2701 agagcgcgcc ttcgctgtcc tattcaatgt attggggatc gaagcccccg accgcgaacg
     2761 ccttgccttc tatctgcgat tggaccctct gacttggggt tgatgttcat gccgcctgtt
     2821 tttcctgctc attggcacgt ttcgcaacct gttctcattg cggacacctt ttccagcctc
     2881 gtttggaaag tttcattgcc agacgggact cctgcaatcg tcaagggatt gaaacctata
     2941 gaagacattg ctgatgaact gcgcggggcc gactatctgg tatggcgcaa tgggagggga
     3001 gcagtccggt tgctcggtcg tgagaacaat ctgatgttgc tcgaatatgc cggggagcga
     3061 atgctctctc acatcgttgc cgagcacggc gactaccagg cgaccgaaat tgcagcggaa
     3121 ctaatggcga agctgtatgc cgcatctgag gaacccctgc cttctgccct tctcccgatc
     3181 cgggatcgct ttgcagcttt gtttcagcgg gcgcgcgatg atcaaaacgc aggttgtcaa
     3241 actgactacg tccacgcggc gattatagcc gatcaaatga tgagcaatgc ctcggaactg
     3301 cgtgggctac atggcgatct gcatcatgaa aacatcatgt tctccagtcg cggctggctg
     3361 gtgatagatc ccgtcggtct ggtcggtgaa gtgggctttg gcgccgccaa tatgttctac
     3421 gatccggctg acagagacga cctttgtctc gatcctagac gcattgcaca gatggcggac
     3481 gcattctctc gtgcgctgga cgtcgatccg cgtcgcctgc tcgaccaggc gtacgcttat
     3541 gggtgccttt ccgcagcttg gaacgcggat ggagaagagg agcaacgcga tctagctatc
     3601 gcggccgcga tcaagcaggt gcgacagacg tcatactaga tatcaagcga cttctcctat
     3661 cccctgggaa cacatcaatc tcaccggaga atatcgctgg ccaaagcctt agcgtaggat
     3721 tccgcccctt cccgcaaacg accccaaaca ggaaacgcag ctgaaacggg aagctcaaca
     3781 cccactgacg catgggttgt tcaggcagta cttcatcaac cagcaaggcg gcactttcgg
     3841 ccatccgccg cgccccacag ctcgggcaga aaccgcgacg cttacagctg aaagcgacca
     3901 ggtgctcggc gtggcaagac tcgcagcgaa cccgtagaaa gccatgctcc agccgcccgc
     3961 attggagaaa ttcttcaaat tcccgttgca catagcccgg caattccttt ccctgctctg
     4021 ccataagcgc agcgaatgcc gggtaatact cgtcaacgat ctgatagaga agggtttgct
     4081 cgggtcggtg gctctggtaa cgaccagtat cccgatcccg gctggccgtc ctggccgcca
     4141 catgaggcat gttccgcgtc cttgcaatac tgtgtttaca tacagtctat cgcttagcgg
     4201 aaagttcttt taccctcagc cgaaatgcct gccgttgcta gacattgcca gccagtgccc
     4261 gtcactccca ctcttacatt gttcgcagta tctaggtaca tgttattgcg tgcaccttca
     4321 tgatgtataa tgttattaat gacagcagaa agatcgacag aattaatatt cttcgtacct
     4381 gggacagtta tcgggtgtcg gccagtgatg agaccaaagg atgcagtata agatgaacca
     4441 ctactattat catggccacc attaccacca ccgttaaaac tacctcccga acttccagag
     4501 ccgctatgac catcattgta ggggtcattt ggtcccatgt gaccaaaacc accgacagta
     4561 ccgctattta actctgtact cataaaatta tcctctttga cttttaaaaa cagcaaaaac
     4621 tgtatttata acaatgtgtt tatatacagt attcgaaata ctacgcccgt caaaaccaca
     4681 ccgtcaacag gttttttgtg tatttttcac gcctcacggg cagcctcaga ccttttgtgt
     4741 taaaacagta atatgttctg ctgttacaat acggtacaca caggagacac tgtcactttt
     4801 atggcatggc acacagttca agagacactg aaattaacag gaaagtcgcg ctcgcaatta
     4861 tatcgtgaca tggctaaagg ccttgtcagc tatcgcacag gaaaaaatga tcgccgggag
     4921 ttcgagacca gtgaactgat tcgggcctat ggcgagctgc gcacttctga gacaccaaaa
     4981 aggcacaagg agggacactc caaatctgtc gttagccagg cggaaaatgc tcagctagac
     5041 gtcattcagc agaaactgga cgctctgcag cagactgtta ccctaatgct tgaagacaag
     5101 atggcgcggg aagcagaaaa ccgcctgcga aatgaggaga gggaacaact acaggccgaa
     5161 attagccgtc tggctgacgc gctggcacag gaaaaaaagc ggggattctg gtcgcggctg
     5221 tttcgctccg gttcagagta acagtgcagg tgactctgat ttaccataac atctgttatc
     5281 agcaccgcct gagaggccct cagggcgttt ctgacgggaa accggtaaaa caggcaacaa
     5341 accacccgaa aacccgccag aaacgcgcag gctctgtttt tacggcatgc atgagtatgc
     5401 gcacaagtgc atagcgcgga aattcacacc attcagccgg ggtaagtcct gtttccggcg
     5461 ttcttcccat ccgaaaacgg tgaacgggga cgcaatttat tgcgtggccg tgaagcgttg
     5521 ccggcgcagc cggaaaaccc gctgtcagca cgttcaggaa gggggtgatg tacaaatggc
     5581 acagaggatg aaagtgacgt atgagctgaa ggaatgatgt aaaagtgatg tataagtgat
     5641 gtaaaagtga tgta
//
LOCUS       DAJVUK010000382         5653 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.guided.208, whole genome shotgun sequence.
ACCESSION   DAJVUK010000382 DAJVUK010000000
VERSION     DAJVUK010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5653
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.guided.208"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            556..1371
                     /gene="sul2"
                     /locus_tag="OQQ57_004400"
     CDS             556..1371
                     /gene="sul2"
                     /locus_tag="OQQ57_004400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HCS1958877.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1476..1958
                     /locus_tag="OQQ57_004401"
                     /pseudo
     CDS             1476..1958
                     /locus_tag="OQQ57_004401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
     gene            1979..2452
                     /locus_tag="OQQ57_004402"
     CDS             1979..2452
                     /locus_tag="OQQ57_004402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA14"
                     /protein_id="HCS1958878.1"
                     /translation="MKVSLIAAKAKNGVIGCGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSGWTSNDDNVVVFQSIEEAMDRLAEFTGHVIVSGGGEI
                     YRETLPMASTLHLSTIDIEPEGDVFFPSIPNTFEVVFEQHFTSNINYCYQIWKKG"
     gene            2527..2802
                     /locus_tag="OQQ57_004403"
                     /pseudo
     CDS             2527..2802
                     /locus_tag="OQQ57_004403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase APH(3')"
     gene            2802..3638
                     /locus_tag="OQQ57_004404"
     CDS             2802..3638
                     /locus_tag="OQQ57_004404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCS1958879.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(3745..4149)
                     /locus_tag="OQQ57_004405"
                     /pseudo
     CDS             complement(3745..4149)
                     /locus_tag="OQQ57_004405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            complement(4193..4582)
                     /locus_tag="OQQ57_004406"
     CDS             complement(4193..4582)
                     /locus_tag="OQQ57_004406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1958880.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            4800..5240
                     /locus_tag="OQQ57_004407"
     CDS             4800..5240
                     /locus_tag="OQQ57_004407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001749639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HCS1958881.1"
                     /translation="MAWHTVQETLKLTGKSRSQLYRDMAKGLVSYRTGKNDRREFETS
                     ELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKLDALQQTVTLMLEDKMA
                     REAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSGSE"
BASE COUNT         1371 a         1484 c         1481 g         1317 t
ORIGIN      
        1 aacccggaaa gacacgacaa aacgccactg gcagcagcca ttagtaacag gagtgcacga
       61 gaagatagat taagaggtct tgaagtagag gcctgactgc ggctacactg aaagaacagt
      121 tttggtaatg gcggtctcgt gaaccctgtt accgggttaa gcagttcccc aactgactta
      181 accttcgaac aaaccgcctc cccaggcggt tttttcgttt acagagcaag agattacgat
      241 tcattgaaaa ggatctcaag aagatccttt gtagattact atcaattaat cttccgaaca
      301 tgacaccagt cactgttgat tacggttaaa ccgctccgta acaggtttcc ctcgtattgg
      361 tgacttgcag caccaaagaa gcaaaaaaga taaatatatc tacttattga gagatgatat
      421 atttatttcc aaaatgctac agatacatca tcatgaaacg gatcaccgca aacaggttac
      481 tcgcctgggg attccctttc gacccgagca tccgtatgag actcatgctc gattattatt
      541 attatagaag cccccatgaa taaatcgctc atcattttcg gcatcgtcaa cataacctcg
      601 gacagtttct ccgatggagg ccggtatctg gcgccagacg cagccattgc gcaggcgcgt
      661 aagctgatgg ccgagggggc agatgtgatc gacctcggtc cggcatccag caatcccgac
      721 gccgcgcctg tttcgtccga cacagaaatc gcgcgtatcg cgccggtgct ggacgcgctc
      781 aaggcagatg gcattcccgt ctcgctcgac agttatcaac ccgcgacgca agcctatgcc
      841 ttgtcgcgtg gtgtggccta tctcaatgat attcgcggtt ttccagacgc tgcgttctat
      901 ccgcaattgg cgaaatcatc tgccaaactc gtcgttatgc attcggtgca agacgggcag
      961 gcagatcggc gcgaggcacc cgctggcgac atcatggatc acattgcggc gttctttgac
     1021 gcgcgcatcg cggcgctgac gggtgccggt atcaaacgca accgccttgt ccttgatccc
     1081 ggcatggggt tttttctggg ggctgctccc gaaacctcgc tctcggtgct ggcgcggttc
     1141 gatgaattgc ggctgcgctt cgatttgccg gtgcttctgt ctgtttcgcg caaatccttt
     1201 ctgcgcgcgc tcacaggccg tggtccgggg gatgtcgggg ccgcgacact cgctgcagag
     1261 cttgccgccg ccgcaggtgg agctgacttc atccgcacac acgagccgcg ccccttgcgc
     1321 gacgggctgg cggtattggc ggcgctgaaa gaaaccgcaa gaattcgtta actgcacatt
     1381 cgggatattt ctctatattc gcgcttcatc agaaaactga aggaacctcc attgaatcga
     1441 actaatattt ttttggtgaa tcgcattctg actggttgcc tgtcagaggc ggagaatctg
     1501 gtgattttgt ttttcgacgt ggtgacgggc atgccttcgc gaaaatcgca cctgcttccc
     1561 gccgcggtga gctcgctgga gagcgtgacc gcctcatttg gctcaaaggt cgaggtgtgg
     1621 cttgccccga ggtcatcaac tggcaggagg aacaggaggg tgcatgcttg gtgataacgg
     1681 caattccggg agtaccggcg gctgatctgt ctggagcgga tttgctcaaa gcgtggccgt
     1741 caatggggca gcaacttggc gctgttcaca gcctatcggt tgatcaatgt ccgtttgagc
     1801 gcaggctgtc gcgaatgttc ggacgcgccg ttgatgtggt gtcccgcaat gccgtcaatc
     1861 ccgacttctt accggacgag gacaagagta cgccgcagct cgatcttttg gctcgtgtcg
     1921 aacgagagct accggtgcgg ctcgaccaag agcgcaccgt taacccagga tgagaacctt
     1981 gaaagtatca ttgatagctg cgaaagcgaa aaacggcgtg attggttgcg gtccagacat
     2041 accctggtcc gcgaaagggg agcagctact ttttaaagca ttgacctaca atcagtggct
     2101 tctggtgggt cgcaagacgt ttgaatctat gggcgcactc cccaatagga aatacgcggt
     2161 cgttacccgc tcaggttgga catcaaatga tgacaatgta gttgtatttc agtcaatcga
     2221 agaggccatg gacaggctag ctgaattcac cggtcacgtt atagtgtctg gtggcggaga
     2281 aatttaccga gaaacattac ccatggcctc tacgctccac ttatcgacga tcgacatcga
     2341 gccagagggg gatgttttct tcccgagtat tccaaatacc ttcgaagttg tttttgagca
     2401 acactttact tcaaacatta actattgcta tcaaatttgg aaaaagggtt aacaaagcta
     2461 tgcaatcgac ggcaaaaagc ttcgttcgct tcgcgcacta cgcctttttc cgcgattgat
     2521 agcgacgata tggttgtttg ccatggtgat ccctgcatgc cgaacttcat ggtggaccct
     2581 aaaactcttc aatgcacggg tctgatcgac cttgggcggc tcggaacagc agatcgctat
     2641 gccgatttgg cactcatgat tgctaacgcc gaagagaact gggcagcgcc agatgaagca
     2701 gagcgcgcct tcgctgtcct attcaatgta ttggggatcg aagcccccga ccgcgaacgc
     2761 cttgccttct atctgcgatt ggaccctctg acttggggtt gatgttcatg ccgcctgttt
     2821 ttcctgctca ttggcacgtt tcgcaacctg ttctcattgc ggacaccttt tccagcctcg
     2881 tttggaaagt ttcattgcca gacgggactc ctgcaatcgt caagggattg aaacctatag
     2941 aagacattgc tgatgaactg cgcggggccg actatctggt atggcgcaat gggaggggag
     3001 cagtccggtt gctcggtcgt gagaacaatc tgatgttgct cgaatatgcc ggggagcgaa
     3061 tgctctctca catcgttgcc gagcacggcg actaccaggc gaccgaaatt gcagcggaac
     3121 taatggcgaa gctgtatgcc gcatctgagg aacccctgcc ttctgccctt ctcccgatcc
     3181 gggatcgctt tgcagctttg tttcagcggg cgcgcgatga tcaaaacgca ggttgtcaaa
     3241 ctgactacgt ccacgcggcg attatagccg atcaaatgat gagcaatgcc tcggaactgc
     3301 gtgggctaca tggcgatctg catcatgaaa acatcatgtt ctccagtcgc ggctggctgg
     3361 tgatagatcc cgtcggtctg gtcggtgaag tgggctttgg cgccgccaat atgttctacg
     3421 atccggctga cagagacgac ctttgtctcg atcctagacg cattgcacag atggcggacg
     3481 cattctctcg tgcgctggac gtcgatccgc gtcgcctgct cgaccaggcg tacgcttatg
     3541 ggtgcctttc cgcagcttgg aacgcggatg gagaagagga gcaacgcgat ctagctatcg
     3601 cggccgcgat caagcaggtg cgacagacgt catactagat atcaagcgac ttctcctatc
     3661 ccctgggaac acatcaatct caccggagaa tatcgctggc caaagcctta gcgtaggatt
     3721 ccgccccttc ccgcaaacga ccccaaacag gaaacgcagc tgaaacggga agctcaacac
     3781 ccactgacgc atgggttgtt caggcagtac ttcatcaacc agcaaggcgg cactttcggc
     3841 catccgccgc gccccacagc tcgggcagaa accgcgacgc ttacagctga aagcgaccag
     3901 gtgctcggcg tggcaagact cgcagcgaac ccgtagaaag ccatgctcca gccgcccgca
     3961 ttggagaaat tcttcaaatt cccgttgcac atagcccggc aattcctttc cctgctctgc
     4021 cataagcgca gcgaatgccg ggtaatactc gtcaacgatc tgatagagaa gggtttgctc
     4081 gggtcggtgg ctctggtaac gaccagtatc ccgatcccgg ctggccgtcc tggccgccac
     4141 atgaggcatg ttccgcgtcc ttgcaatact gtgtttacat acagtctatc gcttagcgga
     4201 aagttctttt accctcagcc gaaatgcctg ccgttgctag acattgccag ccagtgcccg
     4261 tcactcccac tcttacattg ttcgcagtat ctaggtacat gttattgcgt gcaccttcat
     4321 gatgtataat gttattaatg acagcagaaa gatcgacaga attaatattc ttcgtacctg
     4381 ggacagttat cgggtgtcgg ccagtgatga gaccaaagga tgcagtataa gatgaaccac
     4441 tactattatc atggccacca ttaccaccac cgttaaaact acctcccgaa cttccagagc
     4501 cgctatgacc atcattgtag gggtcatttg gtcccatgtg accaaaacca ccgacagtac
     4561 cgctatttaa ctctgtactc ataaaattat cctctttgac ttttaaaaac agcaaaaact
     4621 gtatttataa caatgtgttt atatacagta ttcgaaatac tacgcccgtc aaaaccacac
     4681 cgtcaacagg ttttttgtgt atttttcacg cctcacgggc agcctcagac cttttgtgtt
     4741 aaaacagtaa tatgttctgc tgttacaata cggtacacac aggagacact gtcactttta
     4801 tggcatggca cacagttcaa gagacactga aattaacagg aaagtcgcgc tcgcaattat
     4861 atcgtgacat ggctaaaggc cttgtcagct atcgcacagg aaaaaatgat cgccgggagt
     4921 tcgagaccag tgaactgatt cgggcctatg gcgagctgcg cacttctgag acaccaaaaa
     4981 ggcacaagga gggacactcc aaatctgtcg ttagccaggc ggaaaatgct cagctagacg
     5041 tcattcagca gaaactggac gctctgcagc agactgttac cctaatgctt gaagacaaga
     5101 tggcgcggga agcagaaaac cgcctgcgaa atgaggagag ggaacaacta caggccgaaa
     5161 ttagccgtct ggctgacgcg ctggcacagg aaaaaaagcg gggattctgg tcgcggctgt
     5221 ttcgctccgg ttcagagtaa cagtgcaggt gactctgatt taccataaca tctgttatca
     5281 gcaccgcctg agaggccctc agggcgtttc tgacgggaaa ccggtaaaac aggcaacaaa
     5341 ccacccgaaa acccgccaga aacgcgcagg ctctgttttt acggcatgca tgagtatgcg
     5401 cacaagtgca tagcgcggaa attcacacca ttcagccggg gtaagtcctg tttccggcgt
     5461 tcttcccatc cgaaaacggt gaacggggac gcaatttatt gcgtggccgt gaagcgttgc
     5521 cggcgcagcc ggaaaacccg ctgtcagcac gttcaggaag ggggtgatgt acaaatggca
     5581 cagaggatga aagtgacgta tgagctgaag gaatgatgta aaagtgatgt ataagtgatg
     5641 taaaagtgat gta
//
LOCUS       DAJVUK010000383         3994 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.guided.239, whole genome shotgun sequence.
ACCESSION   DAJVUK010000383 DAJVUK010000000
VERSION     DAJVUK010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3994
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.guided.239"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            1..650
                     /locus_tag="OQQ57_004408"
                     /pseudo
     CDS             1..650
                     /locus_tag="OQQ57_004408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000521550.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
     gene            647..1261
                     /locus_tag="OQQ57_004409"
     CDS             647..1261
                     /locus_tag="OQQ57_004409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HCS1958882.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1318..2775)
                     /gene="pepD"
                     /locus_tag="OQQ57_004410"
     CDS             complement(1318..2775)
                     /gene="pepD"
                     /locus_tag="OQQ57_004410"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HCS1958883.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3036..3494
                     /gene="gpt"
                     /locus_tag="OQQ57_004411"
     CDS             3036..3494
                     /gene="gpt"
                     /locus_tag="OQQ57_004411"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCS1958884.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3586..>3994
                     /locus_tag="OQQ57_004412"
     CDS             3586..>3994
                     /locus_tag="OQQ57_004412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1958885.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAA"
BASE COUNT          967 a          994 c         1066 g          967 t
ORIGIN      
        1 caccccatta taaggggtac gaataaagta acggggcagt ctattttaca gcggcatatt
       61 gcctcgttct cgcatcatgg tttgcctcaa ggcagtgacg acgcgctacg gtatattgcg
      121 gaacatgacg atgcgctggc gtttgcgtgt attaatcgcc agatgatcgc tttgcgcata
      181 atgcaacaag ttaaggccac gggaagtccg gttctggatg tggcgcataa ctttgttagc
      241 gcgtgtcaaa tcggcgtcaa cagggctggt tgcatcgtaa aggtgccacg ccggatgaca
      301 acggtctggt gattattccc ggttcacgtg gtgattactc ctggattgta cagcctgttg
      361 cgaacgaaaa aacgctccac tcgctggcgc atggggcagg gcgtaaatgg gggcgcaccg
      421 agtgtaaatg gcgtctggca gcgaaataca cggtgacgca actctcgcgg actgaacttg
      481 gcagtcggat aatttgtcgc gataaacaac tcatctttga agaagcgcca caagcctata
      541 aatcggctga aagcgtggtg caatgtctgg tgcaggccgg tttaattatt cctgtcgcgc
      601 ggctgcgtcc ggtgctaacg ctcaaaaaca gtggagggaa aaaaggatga tcttgctaca
      661 actctcctca gcgcaggggc cggaagaatg ttgtctcgca gtgaaaaagg cgctggacag
      721 gctaattaaa gaagctgccc gacaagacgt cgcggtaacg gtgttggaaa cagaaacggg
      781 ccgctactct gacacgctgc gttcagctct ggtttctctg gatggcgata acgcatgggc
      841 attaagcgaa agctggtgtg gcactattca gtggatttgt ccgagtccgt atcggcctca
      901 tcatgggcgc aaaaactggt ttctgggcat tgggcgtttt accgctgatg agcaggagca
      961 atccgatgcg atccggtatg agacgctgcg ttcgtcgggg ccgggcggtc aacatgtcaa
     1021 taaaaccgac tcggcggtac gcgccacgca tttggcatcc ggtattagcg tgaaggttca
     1081 gtcagagcgt agtcagcatg ctaacaagcg gctggcacga ttgctgattg cctggaagct
     1141 ggagcagcag caacaggaaa atagcgcggt gctgaaatcg cagcggcgaa tgttccatca
     1201 ccagattgaa cgtggcaacc cgagacggac atttacaggg atggctttta tcgaaggata
     1261 atgaaggatg aaactgccgg aaggcgatta aacgccatcc ggcagcaaat caaataatta
     1321 cttcgccgga atttctttca gcagttcagt cagcagtgtc cagtaatgac ctacgctttc
     1381 gatgtgaact tgctcatccg gagagtgtgg accggtgata gttggcccga tagaaaccat
     1441 gtccatttcc ggatacggtt ttttgaacag accacattcc aggcccgcgt ggataatctg
     1501 gatgttcggc gtcttgttga acaggcgctg ataggtttca cgtaccagat gcatcaccgg
     1561 agaattagcg tccggctgcc agccaggata tgcgcctttc gcttcggttt tcgcgccagc
     1621 cagtttaccc agcgaatcca gcatgctcac cacgtagtct ttaccgctgt cgatcagtga
     1681 acggatcagg cagtgaattt ctacgttatt gtcagtcatg gtcaccacac cgacgttcag
     1741 ggaggtttca accacacctt tggctacatc ggagttgcgg atcacaccgt tcggggtggc
     1801 gttcagcaga cgaataaagg tatcgcgaga tttcgcaatc agggcagctt tatcgttcgc
     1861 tacagagtcc agcaacaagg ccagattttt ctctttctct gccagctcgt ttttcaggat
     1921 ctcctgatag gtattcacca gagatttcag tgcgtcgact ttatcagctg cgacagcaat
     1981 ggtcgcaaag gcttcacgcg ggatggcgtt acgcagtgtg ccgccgttga aatcgataag
     2041 gcgcaggtcc agttcttctg catgacccgc caggaagcgc accagcagtt tgttggcatt
     2101 acccaggcca acgtggattt caccgccgga gtgaccgcct ttcagacctt ttaaggttaa
     2161 cttgaaggtt tcaaaaccag ctggaaccgc ttcacgatct aaatgcaggt tggaggtgaa
     2221 gtcgataccc cccgcacaac ccatgtagat ttcaccttct tcttcggagt cggtgttaat
     2281 cagaatatca gcctgcaacc agttgctctg taagccaaaa gcaccgtcca taccggcttc
     2341 ttcggtcatg gtcagcagca cttccagcgg accgtgaacc acgttttcgt cagccagaac
     2401 cgccagtgca gaggccatac caatgccgtt atccgcaccc agcgtggtgc cgcgcgcttt
     2461 aacccattcg ccatcaatat aaggctggat aggatctttc gtgaagtcat gcacggtgtc
     2521 gttatttttc tgcggcacca tatcgaggtg ggcctgtaag acgaccggtt tacgattttc
     2581 catacctgcg gtagcaggtt tacgaatcag gatattacct acctgatcgc gttcgacatg
     2641 gaaacctttc tcttttgccc aaccaacaat gtattcagcg agttgctctt catgatagga
     2701 cgggtgcgga atagaacaga ttttggcaaa aatatcccac agcggctgtg gagataattg
     2761 agacagttca gacacgttaa gtctccttgt cgatcacccg caaaacagta ttgcaggtca
     2821 cagggttagc agaaaatgtt gtcaacacaa gacaggcttg cgagatatgt ttgagaatac
     2881 cactttatcc cgcgtcaggg agaggcagtg cgtaaaaaga cgcggactca tgtgaaatac
     2941 tggtttttag tgcgccagat ctctataatc tcgcgcaacc tattttcccc tcgaacactt
     3001 tttaagccgt agataaacag gctgggacac ttcacatgag cgaaaaatac atcgtcacct
     3061 gggacatgtt gcagatccat gcacgtaaac tcgcaagccg actgatgcct tctgaacaat
     3121 ggaaaggcat tattgccgta agccgtggcg gtctggtacc gggtgcgtta ctggcgcgtg
     3181 aactgggtat tcgtcatgtc gataccgttt gtatttccag ctacgatcac gacaaccagc
     3241 gagagcttaa agtgctgaaa cgcgcagaag gcgatggcga aggcttcata gttattgatg
     3301 acctggtgga taccggtggt actgctgttg cgattcgtga aatgtatcca aaagcgcact
     3361 ttgtcaccat cttcgcaaaa ccggctggtc gtccgctggt tgatgactat gttgttgata
     3421 ttccgcaaga tacctggatc gaacagccgt gggatatggg cgtcgtattc gtcccgccaa
     3481 tctccggtcg ctaatctttt caacgcctgg cactgccggg cgttgttctt tttaacttca
     3541 ggcaggttac aatagtttcc agtaagtatt ctggaggctg catccatgac acaggcaaac
     3601 ctgagcgaaa ccctgttcaa accccgcttt aaacatcctg aaacctcgac gctagtccgc
     3661 cgctttaatc acggcgcaca accgcctgtg cagtcggctc ttgatggtaa aaccatccct
     3721 cactggtatc gcatgattaa ccgtctgatg tggatctggc gcggtattga cccacgtgaa
     3781 atcctcgacg tccaggcacg tattgtgatg agcgatgctg aacgtaccga cgatgattta
     3841 tacgatactg tgattggcta ccgtggtggc aactggattt atgagtgggc cacccaggcg
     3901 atggtgtggc aacaaaaagc ctgtgcggaa gaagatccgc aactcagtgg tcgacactgg
     3961 ctgcatgcgg ctacgttgta caacattgcc gcct
//
LOCUS       DAJVUK010000384         3937 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.guided.240, whole genome shotgun sequence.
ACCESSION   DAJVUK010000384 DAJVUK010000000
VERSION     DAJVUK010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.guided.240"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            <1..247
                     /locus_tag="OQQ57_004413"
     CDS             <1..247
                     /locus_tag="OQQ57_004413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="part of four member fumarate reductase enzyme
                     complex FrdABCD which catalyzes the reduction of fumarate
                     to succinate during anaerobic respiration; FrdAB are the
                     catalytic subcomplex consisting of a flavoprotein subunit
                     and an iron-sulfur subunit, respectively; FrdCD are the
                     membrane components which interact with quinone and are
                     involved in electron transfer; the catalytic subunits are
                     similar to succinate dehydrogenase SdhAB; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     flavoprotein subunit"
                     /protein_id="HCS1958886.1"
                     /translation="SAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLE
                     YSDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            240..974
                     /gene="frdB"
                     /locus_tag="OQQ57_004414"
     CDS             240..974
                     /gene="frdB"
                     /locus_tag="OQQ57_004414"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HCS1958887.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            985..1380
                     /gene="frdC"
                     /locus_tag="OQQ57_004415"
     CDS             985..1380
                     /gene="frdC"
                     /locus_tag="OQQ57_004415"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HCS1958888.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            1391..1750
                     /gene="frdD"
                     /locus_tag="OQQ57_004416"
     CDS             1391..1750
                     /gene="frdD"
                     /locus_tag="OQQ57_004416"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HCS1958889.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            1813..2946
                     /locus_tag="OQQ57_004417"
     CDS             1813..2946
                     /locus_tag="OQQ57_004417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HCS1958890.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            3035..3568
                     /gene="blc"
                     /locus_tag="OQQ57_004418"
     CDS             3035..3568
                     /gene="blc"
                     /locus_tag="OQQ57_004418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin Blc"
                     /protein_id="HCS1958891.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGLFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(3565..3882)
                     /gene="sugE"
                     /locus_tag="OQQ57_004419"
     CDS             complement(3565..3882)
                     /gene="sugE"
                     /locus_tag="OQQ57_004419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HCS1958892.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
BASE COUNT          970 a         1035 c         1031 g          901 t
ORIGIN      
        1 ctccgcaatg gcacgtaaag agtcccgcgg cgcacaccag cgtctggacg aaggttgcac
       61 cgagcgtgac gacgtcaact tcctcaaaca caccctcgcc ttccgcgatg ctgatggcac
      121 gactcgcctg gagtacagcg acgtgaagat tactacgctg ccgccagcta aacgcgttta
      181 cggtggcgaa gcggatgcag ccgataaggc ggaagcagcc aataagaagg agaaggcgaa
      241 tggctgagat gaaaaacctg aaaattgagg tggtgcgcta taacccggaa gtcgataccg
      301 caccgcatag cgcattctat gaagtgcctt atgacgcaac tacctcatta ctggatgcgc
      361 tgggctacat caaagacaac ctggcaccgg acctgagtta ccgctggtcc tgccgtatgg
      421 cgatttgtgg ttcctgcggc atgatggtta acaacgtgcc aaaactggca tgtaaaacct
      481 tcctgcgtga ttacaccgac ggtatgaagg ttgaagcgtt agctaacttc ccgattgaac
      541 gcgatctggt ggtcgatatg acccacttca tcgaaagtct ggaagcgatc aaaccgtaca
      601 tcatcggcaa ctcccgcacc gcggatcagg gtactaacat ccagaccccg gcgcagatgg
      661 caaagtatca ccagttctcc ggttgcatca actgtggtct gtgctacgcc gcgtgcccgc
      721 agtttggcct gaacccagag ttcatcggtc cggctgccat tacgctggcg catcgttata
      781 acgaagatag ccgcgaccac ggtaagaagg agcgtatggc gcagttgaac agccagaacg
      841 gcgtatggag ctgtactttc gtgggctatt gctccgaagt ctgcccgaaa cacgtcgatc
      901 cggctgcggc cattcagcag ggcaaagtag aaagttcgaa agactttctt atcgcgaccc
      961 tgaaaccacg ctaaggagtg caacatgacg actaaacgta aaccgtatgt acggccaatg
     1021 acgtccacct ggtggaaaaa attgccgttt tatcgctttt acatgctgcg cgaaggcacg
     1081 gcggttccgg ctgtgtggtt cagcattgaa ctgattttcg ggctgtttgc cctgaaaaat
     1141 ggcccggacg cctgggcggg attcgtcgac tttttacaaa acccggttat cgtgatcatt
     1201 aacctgatca ctctggcggc agctctgctg cacaccaaaa cctggtttga actggcaccg
     1261 aaagcggcca atatcattgt aaaagacgaa aaaatgggac cagagccaat tatcaaaagt
     1321 ctctgggcgg taactgtggt tgccaccatc gtaatcctgt ttgttgccct gtactggtaa
     1381 ggagcctgag atgattaatc caaatccaaa gcgttctgac gaaccggtat tctggggcct
     1441 cttcggggcc ggtggtatgt ggagcgcaat tattgcgccg gtgatgatcc tgctggtggg
     1501 tattctgctg ccactggggc tgtttccggg tgatgcgctg agctacgagc gcgttctggc
     1561 gttcgcgcag agcttcattg gtcgcgtatt cctgttcctg atgatcgttc tgccgctgtg
     1621 gtgtggttta caccgtatgc accacgcgat gcacgatctg aaaattcacg tgcctgcggg
     1681 caaatgggtt ttctacggtc tggctgctat cctgacagtt gtcacgctga ttggtatcgt
     1741 tacaatctaa cgtatcgcca atgtaaatcc ggcccgccta tggcgggccg ttttgtatgg
     1801 aaaccagacc ttatgttcaa aacgacgctc tgcgccttat taattaccgc ctcttgctcc
     1861 acatttgctg cccctcaaca aatcaacgat attgtgcatc gcacaattac cccgcttata
     1921 gagcaacaaa agatccccgg tatggcggtg gcggtaattt atcagggtaa accttattac
     1981 tttacctggg gctatgcgga catcgccaaa aagcagcccg tcacacagca aacgttgttt
     2041 gagttaggtt cggtcagcaa aacatttacg ggcgtgcttg gtggcgatgc tattgctcga
     2101 ggggaaatca agttaagcga tcccgcaaca aaatactggc ctgaacttac cgctaaacag
     2161 tggaatggga tcacactatt acatcttgcg acctacaccg ctggcggcct gccattgcag
     2221 atgccggatg aagtgaaatc ctcaagcgac ttgctgcgct tctatcaaaa ctggcagcct
     2281 gcatgggctc caggaacaca acgtctgtat gccaactcca gtatcggttt gttcggcgca
     2341 ctggctgtga agccgtctgg tttgagtttt gagcaggcga tgcaaactcg tgtcttccag
     2401 ccactcaaac tcaaccatac gtggattaat gtaccgcccg cagaagaaaa gaattacgcc
     2461 tggggatatc gcgaaggcaa ggcagttcat gtttcgccag gggcgttaga tgctgaagct
     2521 tatggtgtga agtcgaccat tgaagatatg gcccgctggg tgcaaagcaa tttaaccccc
     2581 cttgatatca atgagaaaac gcttcaacaa gggatacaac tggcacaatc tcgctactgg
     2641 caaaccggcg atatgtatca gggcctgggc tgggaaatgc tggactggcc ggtcaatcct
     2701 gacagcatca ttaacggcag tgacaataaa attgcactgg cagcacgccc ggtaaaagcg
     2761 attaagcccc caactcctgc agtacgcgca tcatgggtac ataaaacggg ggcgaccggc
     2821 ggatttggta gctatgtcgc gtttattcca gaaaaagagc tgggtatcgt gatgctggct
     2881 aacaaaaact atcccaatcc agcgagagtc gccgccgcct gtcagattct caacgctcta
     2941 cagtaaaatt tcatcgggtc cgaattttcg gaccttttct gcgcttttcc ttgctgtcat
     3001 ctacacttag aaaaaaacca gtaaggaaac atttatgcgc ctgctccctc tcgttgccgc
     3061 agcgacagct gcatttctgg tcgttgcctg cagttctcct acgccgccgc gtggcgtgac
     3121 agtagtgaat aatttcgacg ctaaacgcta tctcggtacc tggtatgaga ttgcccgttt
     3181 tgatcaccgt tttgaacgtg gactggaaaa agtcaccgca acatacagtc tgcgtgatgg
     3241 cggcggcctg aatgtcatca ataaaggcta taaccctgac agagaaatgt ggcagcagag
     3301 tgaagggaaa gcgtacttta ccggcgcacc aacacgcgct gcgctgaaag tgtcattctt
     3361 tggtcttttc tatggcggtt ataacgtcat tgcacttgat cgggaatacc gccatgcgct
     3421 ggtttgcggc ccggaccgcg actacctgtg gatactctcc cgcacgccaa ccatttctga
     3481 cgaagtgaaa caggagatgc tggcagtcgc gacccgggaa gggtttgatg tcagtaagtt
     3541 tatttgggta cagcagcccg gtagttagtg agtgctgagt ttcagaccaa taatccccaa
     3601 tacgattaac gccagactcg ccaggcgcat cgggttagcg gactcaccga gcagcacaat
     3661 gccggtgata gccgcgccga ctgcgccaat acccgtccac acggcataag ccgtccctac
     3721 tggtaacgat ttcatcgccc aggcaagtag cgccatactg acaatcatcg ccgtcacggt
     3781 aataacactc ggcgtcaaac gactaaagcc gtgggtatat ttcaggccaa cggcccatac
     3841 cacttccagc agaccagcaa taactaagat aatccaggac atatcaggct ccggagaatt
     3901 ggggccgtcc ccggtgaaaa gacgcgtttg caggtcg
//
LOCUS       DAJVUK010000385         2003 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella boydii isolate 302052
            SAMEA8899969-rid15856533.guided.291, whole genome shotgun sequence.
ACCESSION   DAJVUK010000385 DAJVUK010000000
VERSION     DAJVUK010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8899969
            Sequence Read Archive: ERR6005776
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478690.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478690.1
            Genome Coverage       :: 57x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 01:59:15
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 191 of 344
            Pseudo Genes (incomplete)         :: 95 of 344
            Pseudo Genes (internal stop)      :: 98 of 344
            Pseudo Genes (multiple problems)  :: 37 of 344
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8899969-rid15856533.guided.291"
                     /serovar="S. boydii 2"
                     /isolate="302052"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:621"
                     /country="Mozambique"
                     /collection_date="2009-05-20"
     gene            113..1312
                     /gene="tet(A)"
                     /locus_tag="OQQ57_004420"
     CDS             113..1312
                     /gene="tet(A)"
                     /locus_tag="OQQ57_004420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HCS1958893.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSG
                     AGQRADR"
     gene            complement(1344..1994)
                     /locus_tag="OQQ57_004421"
     CDS             complement(1344..1994)
                     /locus_tag="OQQ57_004421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001749998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCS1958894.1"
                     /translation="MLFISVYRLPGGVAATVGAVQPLMVVFISAALLGSPIRLMAVLG
                     AICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLTRKWQPPVPLLTFTAWQL
                     AAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFRGISRLEPTVVSL
                     LGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTPRARIACRKSP"
BASE COUNT          373 a          623 c          613 g          394 t
ORIGIN      
        1 ttgtcatgct tgacacttta tcactgataa acataatatg tccaccaact tatcagtgat
       61 aaagaatccg cgcgttcaat cggaccagcg gaggctggtc cggaggccag acgtgaaacc
      121 caacagaccc ctgatcgtaa ttctgagcac tgtcgcgctc gacgctgtcg gcatcggcct
      181 gattatgccg gtgctgccgg gcctcctgcg cgatctggtt cactcgaacg acgtcaccgc
      241 ccactatggc attctgctgg cgctgtatgc gttgatgcaa tttgcctgcg cacctgtgct
      301 gggcgcgctg tcggatcgtt tcgggcggcg gccggtcttg ctcgtctcgc tggccggcgc
      361 tgctgtcgac tacgccatca tggcgacggc gcctttcctt tgggttctct atatcgggcg
      421 gatcgtggcc ggcatcaccg gggcgactgg ggcggtagcc ggcgcttata ttgccgatat
      481 cactgatggc gatgagcgcg cgcggcactt cggcttcatg agcgcctgtt tcgggttcgg
      541 gatggtcgcg ggacctgtgc tcggtgggct gatgggcggt ttctcccccc acgctccgtt
      601 cttcgccgcg gcagccttga acggcctcaa tttcctgacg ggctgtttcc ttttgccgga
      661 gtcgcacaaa ggcgaacgcc ggccgttacg ccgggaggct ctcaacccgc tcgcttcgtt
      721 ccggtgggcc cggggcatga ccgtcgtcgc cgccctgatg gcggtcttct tcatcatgca
      781 acttgtcgga caggtgccgg ccgcgctttg ggtcattttc ggcgaggatc gctttcactg
      841 ggacgcgacc acgatcggca tttcgcttgc cgcatttggc attctgcatt cactcgccca
      901 ggcaatgatc accggccctg tagccgcccg gctcggcgaa aggcgggcac tcatgctcgg
      961 aatgattgcc gacggcacag gctacatcct gcttgccttc gcgacacggg gatggatggc
     1021 gttcccgatc atggtcctgc ttgcttcggg tggcatcgga atgccggcgc tgcaagcaat
     1081 gttgtccagg caggtggatg aggaacgtca ggggcagctg caaggctcac tggcggcgct
     1141 caccagcctg acctcgatcg tcggacccct cctcttcacg gcgatctatg cggcttctat
     1201 aacaacgtgg aacgggtggg catggattgc aggcgctgcc ctctacttgc tctgcctgcc
     1261 ggcgctgcgt cgcgggcttt ggagcggcgc agggcaacga gccgatcgct gatcgtggaa
     1321 acgataggcc tatgccatgc gggtcaaggc gacttccggc aagctatacg cgccctagga
     1381 gtgcggttgg aacgttggcc cagccagata ctcccgatca cgagcaggac gccgatgatt
     1441 tgaagcgcac tcagcgtctg atccaagaac aaccatccta gcaacacggc ggtccccggg
     1501 ctgagaaagc ccagtaagga aacaactgta ggttcgagtc gcgagatccc ccggaaccaa
     1561 aggaagtagg ttaaacccgc tccgatcagg ccgagccacg ccaggccgag aacattggtt
     1621 cctgtaggca tcgggattgg cggatcaaac actaaagcta ctggaacgag cagaagtcct
     1681 ccggccgcca gttgccaggc ggtaaaggtg agcagaggca cgggaggttg ccacttgcgg
     1741 gtcagcacgg ttccgaacgc catggaaacc gcccccgcca ggcccgctgc gacgccgaca
     1801 ggatctagcg ctgcgtttgg tgtcaacacc aacagcgcca cgcccgcagt tccgcaaata
     1861 gcccccagga ccgccatcaa tcgtatcggg ctacctagca gagcggcaga gatgaacacg
     1921 accatcagcg gctgcacagc gcctaccgtc gccgcgaccc cgcccggcag gcggtagacc
     1981 gaaataaaca acaagctcca gaa
//
